Query psy12523
Match_columns 544
No_of_seqs 334 out of 2444
Neff 8.2
Searched_HMMs 46136
Date Fri Aug 16 21:31:43 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy12523.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/12523hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0245|consensus 100.0 1.8E-69 3.9E-74 578.9 18.0 299 122-529 81-381 (1221)
2 KOG4280|consensus 100.0 8E-65 1.7E-69 532.8 20.5 294 120-531 77-371 (574)
3 KOG0241|consensus 100.0 2.4E-63 5.2E-68 523.0 20.5 318 95-531 69-386 (1714)
4 KOG0243|consensus 100.0 6.7E-61 1.5E-65 523.1 17.0 289 119-529 121-424 (1041)
5 PLN03188 kinesin-12 family pro 100.0 3.2E-59 6.9E-64 514.4 25.3 298 122-529 159-466 (1320)
6 KOG0242|consensus 100.0 1.5E-56 3.2E-61 489.0 20.8 286 121-529 79-365 (675)
7 cd01373 KISc_KLP2_like Kinesin 100.0 4E-55 8.8E-60 449.6 24.5 262 122-496 68-337 (337)
8 cd01370 KISc_KIP3_like Kinesin 100.0 1.3E-54 2.8E-59 446.0 24.3 258 122-496 81-338 (338)
9 KOG0240|consensus 100.0 5.4E-55 1.2E-59 446.3 18.0 297 101-519 54-355 (607)
10 cd01368 KISc_KIF23_like Kinesi 100.0 2.2E-53 4.8E-58 437.8 24.3 259 123-494 83-345 (345)
11 cd01365 KISc_KIF1A_KIF1B Kines 100.0 4.3E-53 9.4E-58 438.4 25.4 273 122-503 82-356 (356)
12 cd01364 KISc_BimC_Eg5 Kinesin 100.0 2.5E-51 5.4E-56 425.1 24.6 264 122-505 75-352 (352)
13 cd01367 KISc_KIF2_like Kinesin 100.0 3.1E-51 6.7E-56 418.6 21.5 244 122-494 78-322 (322)
14 cd01376 KISc_KID_like Kinesin 100.0 5.9E-51 1.3E-55 416.2 23.5 246 122-494 74-319 (319)
15 cd01371 KISc_KIF3 Kinesin moto 100.0 4.2E-50 9.1E-55 412.4 24.5 256 122-496 75-333 (333)
16 cd01374 KISc_CENP_E Kinesin mo 100.0 8.6E-50 1.9E-54 408.5 24.8 255 122-496 67-321 (321)
17 cd01375 KISc_KIF9_like Kinesin 100.0 6.5E-50 1.4E-54 410.8 23.8 253 123-494 75-334 (334)
18 cd01369 KISc_KHC_KIF5 Kinesin 100.0 8.7E-50 1.9E-54 409.4 22.8 253 122-496 70-325 (325)
19 cd01372 KISc_KIF4 Kinesin moto 100.0 1.3E-49 2.8E-54 411.0 23.8 267 123-497 68-341 (341)
20 cd01366 KISc_C_terminal Kinesi 100.0 7.9E-49 1.7E-53 403.2 24.2 257 122-498 71-328 (329)
21 PF00225 Kinesin: Kinesin moto 100.0 2E-48 4.3E-53 401.8 20.8 262 122-496 68-335 (335)
22 smart00129 KISc Kinesin motor, 100.0 1E-47 2.2E-52 396.2 25.4 263 122-503 73-335 (335)
23 KOG0239|consensus 100.0 4.4E-48 9.5E-53 420.7 14.9 261 122-503 386-647 (670)
24 cd00106 KISc Kinesin motor dom 100.0 3.7E-46 8E-51 383.8 24.3 257 122-494 72-328 (328)
25 KOG0244|consensus 100.0 1.6E-48 3.5E-53 419.8 3.5 289 121-529 58-350 (913)
26 KOG0246|consensus 100.0 5.9E-46 1.3E-50 378.5 19.6 248 124-497 287-542 (676)
27 KOG0247|consensus 100.0 5.8E-46 1.3E-50 388.9 15.3 249 118-434 106-417 (809)
28 COG5059 KIP1 Kinesin-like prot 100.0 5.6E-42 1.2E-46 371.6 19.5 298 86-504 39-344 (568)
29 KOG0245|consensus 100.0 2.2E-42 4.7E-47 371.2 12.1 131 1-138 106-287 (1221)
30 KOG0241|consensus 100.0 8.9E-35 1.9E-39 307.7 10.4 135 1-142 112-295 (1714)
31 cd01363 Motor_domain Myosin an 100.0 7.8E-34 1.7E-38 268.0 14.7 168 124-432 19-186 (186)
32 KOG4280|consensus 100.0 4E-34 8.7E-39 301.2 8.7 127 1-136 104-279 (574)
33 KOG0243|consensus 100.0 1.2E-32 2.6E-37 302.0 10.2 123 3-136 157-334 (1041)
34 KOG0239|consensus 100.0 6.7E-33 1.5E-37 302.1 7.0 125 1-137 411-585 (670)
35 KOG0242|consensus 100.0 3.1E-32 6.7E-37 298.1 4.5 122 1-136 105-273 (675)
36 PLN03188 kinesin-12 family pro 100.0 2.6E-31 5.6E-36 294.3 10.5 125 5-136 198-373 (1320)
37 KOG0244|consensus 100.0 1.8E-31 3.9E-36 288.3 0.2 126 1-138 83-261 (913)
38 cd01370 KISc_KIP3_like Kinesin 100.0 1.4E-29 3E-34 260.5 10.0 127 1-136 106-279 (338)
39 KOG0240|consensus 100.0 1.4E-29 3.1E-34 259.9 8.7 120 5-136 108-274 (607)
40 cd01373 KISc_KLP2_like Kinesin 100.0 3.9E-29 8.6E-34 257.1 9.5 123 5-136 105-277 (337)
41 cd01368 KISc_KIF23_like Kinesi 99.9 1.6E-27 3.6E-32 245.7 9.1 122 1-136 107-285 (345)
42 KOG0247|consensus 99.9 7.1E-27 1.5E-31 245.8 5.0 140 1-144 133-383 (809)
43 cd01376 KISc_KID_like Kinesin 99.9 2.5E-26 5.4E-31 234.9 8.5 119 1-135 99-264 (319)
44 cd01367 KISc_KIF2_like Kinesin 99.9 4.4E-26 9.6E-31 233.2 8.8 119 1-136 103-268 (322)
45 cd01365 KISc_KIF1A_KIF1B Kines 99.9 5.9E-24 1.3E-28 220.6 6.2 131 1-138 107-287 (356)
46 cd01371 KISc_KIF3 Kinesin moto 99.9 7.2E-23 1.6E-27 210.6 6.6 126 1-136 100-276 (333)
47 COG5059 KIP1 Kinesin-like prot 99.9 1.5E-22 3.3E-27 220.1 8.6 126 1-138 108-280 (568)
48 cd01374 KISc_CENP_E Kinesin mo 99.9 1.4E-22 3.1E-27 207.5 7.4 128 1-139 92-266 (321)
49 cd01366 KISc_C_terminal Kinesi 99.9 2.3E-22 5E-27 206.9 6.4 127 1-138 96-272 (329)
50 cd01369 KISc_KHC_KIF5 Kinesin 99.9 2.8E-22 6.2E-27 205.8 6.9 125 1-137 95-269 (325)
51 cd01375 KISc_KIF9_like Kinesin 99.9 3.4E-22 7.4E-27 205.6 7.0 124 5-139 106-282 (334)
52 cd01372 KISc_KIF4 Kinesin moto 99.8 6.3E-22 1.4E-26 204.7 7.0 128 4-139 101-284 (341)
53 cd01364 KISc_BimC_Eg5 Kinesin 99.8 5.2E-22 1.1E-26 206.0 6.3 124 4-138 114-289 (352)
54 KOG0246|consensus 99.8 8.1E-21 1.7E-25 195.1 8.2 121 6-140 321-488 (676)
55 PF00225 Kinesin: Kinesin moto 99.8 1.5E-21 3.3E-26 201.5 2.6 131 1-138 93-279 (335)
56 smart00129 KISc Kinesin motor, 99.8 1.6E-20 3.5E-25 193.8 6.5 127 1-137 98-271 (335)
57 cd00106 KISc Kinesin motor dom 99.8 3E-20 6.4E-25 191.4 6.4 130 1-139 97-275 (328)
58 cd01363 Motor_domain Myosin an 99.7 2.5E-18 5.5E-23 162.3 5.7 113 1-139 42-154 (186)
59 PF08776 VASP_tetra: VASP tetr 32.2 69 0.0015 21.9 3.1 21 508-528 10-30 (40)
60 PF04508 Pox_A_type_inc: Viral 23.8 1.1E+02 0.0024 18.3 2.6 17 511-527 3-19 (23)
No 1
>KOG0245|consensus
Probab=100.00 E-value=1.8e-69 Score=578.95 Aligned_cols=299 Identities=55% Similarity=0.807 Sum_probs=264.5
Q ss_pred hhhcccccceeeeecccccccccccccCC--CCCchhHHHHHHhhhccccccCCCCCcccceeEEEEEEEeecceeeecC
Q psy12523 122 QEALESMGISVQASGIKVEKNKYYLVNLN--ADPSLNELLVYYLKDCTLIGSSDKNDIQLSGNLKINFGLFFCFQVHDLL 199 (544)
Q Consensus 122 ~~~l~g~~~~i~a~g~~~sgkt~Tl~G~~--~~~Gli~~~~~~Lf~~~~~~~~~~~~~~~~~~v~~S~~Evy~e~v~DLL 199 (544)
+-.+.|||.|||||||+|+||+|||+|-. .++||||+++.+||..+... ....+.|.|.|||+|||||+|+|||
T Consensus 81 ~~AfEGYN~ClFAYGQTGSGKSYTMMG~~~~~e~GIIPrlCEeLF~ri~~n----q~~~~sy~VevSymEIYcErVrDLL 156 (1221)
T KOG0245|consen 81 DHAFEGYNVCLFAYGQTGSGKSYTMMGFQEPDEPGIIPRLCEELFSRIADN----QSQQMSYSVEVSYMEIYCERVRDLL 156 (1221)
T ss_pred HHHhcccceEEEEeccCCCCcceeeeccCCCCCCCchhHHHHHHHHHHhhc----ccccceEEEEEeehhHHHHHHHHHh
Confidence 45899999999999999999999999987 88999999999999977643 3334899999999999999999999
Q ss_pred CCCCCCCcceEEEcCCCCceeccCeEEEecCHHHHHHHHHhhhccccceeccCCCCCCCceeEEEEEEEEEeeccCCCcc
Q psy12523 200 DPKANKQSLKVREHNVLGPYVDGLSQLAVTSFQEIDSLMAEGNKSRTVAATNMNSESSRSHAVFSVVLTQTLVDTKSGVE 279 (544)
Q Consensus 200 ~~~~~~~~l~i~e~~~~~~~v~~ls~~~v~s~~e~~~ll~~g~~~R~~~~t~~n~~SSRSH~i~~i~v~~~~~~~~~~~~ 279 (544)
+....+.+|+|||+|.-|+||++|+...|+|..|+..+++.|+
T Consensus 157 ~~p~~kg~LRVREHP~lGPYVedLS~~aV~Sy~dI~~~md~GN------------------------------------- 199 (1221)
T KOG0245|consen 157 NAPKSKGGLRVREHPILGPYVEDLSKLAVTSYADIQDLMDEGN------------------------------------- 199 (1221)
T ss_pred hCCCCCCCceeeccCccChhHhHhhhcccccHHHHHHHHHhcc-------------------------------------
Confidence 9444789999999999999999999999999888777776654
Q ss_pred cceeeeeeeeccchHHHHHHHHhhhcccccccccCCCCCCCceeEEEEEEEEEeecCCCCcccceeeeeeeeeccCCcch
Q psy12523 280 GEKVARLSLVDLASEEIDSLMAEGNKSRTVAATNMNSESSRSHAVFSVVLTQTLVDTKSGVEGEKVARLSLVDLAGSERA 359 (544)
Q Consensus 280 ~~~v~~~s~v~~~~ee~~~ll~~g~~~R~~~sT~~N~~SSRSH~Ifti~i~q~~~~~~~~~~~~~~s~l~~vDLagse~~ 359 (544)
+.|++|+|+||+.|||||+||||.++|+..+...+....++|++++||||||||+
T Consensus 200 -------------------------kqRTtAATnMNdtSSRSHaVFtIvftQk~~~~~~~l~sek~SKIsLVDLAGSERa 254 (1221)
T KOG0245|consen 200 -------------------------KQRTTAATNMNDTSSRSHAVFTIVFTQKKHDQDTGLDSEKVSKISLVDLAGSERA 254 (1221)
T ss_pred -------------------------hhhhhhhhccccccccceeEEEEEEEeeeccccCCCcceeeeeeeEEeccCcccc
Confidence 5556777777778888888888888888877777777889999999999999999
Q ss_pred hccCcchhhhhccccccchhhhHHHHHHHhhcccCCCCCCCCccccchhhHHHHhhhhcCCCCceeeeeeeCCcccchhh
Q psy12523 360 VKTGAVGERLKEGSNINKSLTTLGLVISKLADSTSSSKNKDKFVPYRDSVLTWLLKDNLGGNSKTVMVATVSPAADNYEE 439 (544)
Q Consensus 360 ~~~~~~~~~~~e~~~in~sL~~l~~vi~~La~~~~~~~~~~~~vp~r~SkLT~lL~~~lggns~~~~i~~vsp~~~~~~e 439 (544)
..+++.|+|++||.+||+||.+|+.||.+||+.+..++++..+||||||.||+
T Consensus 255 sstGa~G~RLKEGa~INKSLtTLGkVISALAe~~~~k~~ks~fIPYRDSVLTW--------------------------- 307 (1221)
T KOG0245|consen 255 SSTGANGDRLKEGANINKSLTTLGKVISALAESQKGKKKKSDFIPYRDSVLTW--------------------------- 307 (1221)
T ss_pred cccCCCccchhcccccchHHHHHHHHHHHHHHHhccCCCCCccccchHHHHHH---------------------------
Confidence 99999999999999999999999999999999876555555566666666555
Q ss_pred hhccccccccccccccccccccCCCcceEEEEecCCccccHHHHHHhhcchhHHhhhhccceecCCccHHHHHHHHHHHH
Q psy12523 440 TLSTLRYADRAKRIVNHAVDNLGGNSKTVMVATVSPAADNYEETLSTLRYADRAKRIVNHAVVNEDPNARIIRELRQEVD 519 (544)
Q Consensus 440 tl~tL~~~~R~sklt~~l~~slggnskt~mi~~iSp~~~~~~eTl~TL~~a~rak~i~n~~~~n~~~~~~~i~~l~~ei~ 519 (544)
+|++||||||||+|||++||+..||+|||+|||||.|||+|+|++++|++++.++|++|++|+.
T Consensus 308 ----------------LLkEnLGGNSKTaMIAAlSPAdiNyeETLSTLRYAdRAK~Iv~~avVNEdpnaKLIRELreEv~ 371 (1221)
T KOG0245|consen 308 ----------------LLKENLGGNSKTAMIAALSPADINYEETLSTLRYADRAKQIVNNAVVNEDPNAKLIRELREEVA 371 (1221)
T ss_pred ----------------HHHHhcCCcchhhhhhccChhhcChHHHHHHHHHhhHhhhhhccceeCCCccHHHHHHHHHHHH
Confidence 4557788899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcC
Q psy12523 520 KLKEMLISAG 529 (544)
Q Consensus 520 ~Lk~~l~~~~ 529 (544)
+||..|...+
T Consensus 372 rLksll~~~~ 381 (1221)
T KOG0245|consen 372 RLKSLLRAQG 381 (1221)
T ss_pred HHHHHHhccc
Confidence 9999997554
No 2
>KOG4280|consensus
Probab=100.00 E-value=8e-65 Score=532.78 Aligned_cols=294 Identities=42% Similarity=0.584 Sum_probs=252.4
Q ss_pred hhhhhcccccceeeeecccccccccccccC-CCCCchhHHHHHHhhhccccccCCCCCcccceeEEEEEEEeecceeeec
Q psy12523 120 NKQEALESMGISVQASGIKVEKNKYYLVNL-NADPSLNELLVYYLKDCTLIGSSDKNDIQLSGNLKINFGLFFCFQVHDL 198 (544)
Q Consensus 120 n~~~~l~g~~~~i~a~g~~~sgkt~Tl~G~-~~~~Gli~~~~~~Lf~~~~~~~~~~~~~~~~~~v~~S~~Evy~e~v~DL 198 (544)
-.+.++.|++.|||||||+|+||||||.|+ ....|||||++.|||.++...+... .|.|++||+|||||+|+||
T Consensus 77 lV~svl~GyNgtvFaYGQTGsGKTyTM~G~~~~~~GiiPraf~~LF~~I~~~~~~~-----~f~vrvS~lEiYnE~i~DL 151 (574)
T KOG4280|consen 77 LVESVLEGYNGTVFAYGQTGSGKTYTMIGPDPELRGLIPRAFEHLFRHIDERKEKT-----RFLVRVSYLEIYNESIRDL 151 (574)
T ss_pred HHHHHhcccCceEEEeccCCCCCceEeeCCChhhCCchhHHHHHHHHHHHhccccc-----eEEEEeehHHHHhHHHHHH
Confidence 334599999999999999999999999999 4447999999999999877643222 8999999999999999999
Q ss_pred CCCCCCCCcceEEEcCCCCceeccCeEEEecCHHHHHHHHHhhhccccceeccCCCCCCCceeEEEEEEEEEeeccCCCc
Q psy12523 199 LDPKANKQSLKVREHNVLGPYVDGLSQLAVTSFQEIDSLMAEGNKSRTVAATNMNSESSRSHAVFSVVLTQTLVDTKSGV 278 (544)
Q Consensus 199 L~~~~~~~~l~i~e~~~~~~~v~~ls~~~v~s~~e~~~ll~~g~~~R~~~~t~~n~~SSRSH~i~~i~v~~~~~~~~~~~ 278 (544)
|+|.+ .+.+.+++++..|+||+||+++.|.+++++..++..|.++|++++|.||.+|||||+||+|+|+
T Consensus 152 L~~~~-~~~l~lre~p~~Gv~V~nlse~~v~s~~d~~~~l~~G~~nR~vgat~mn~~SsRSH~ift~~i~---------- 220 (574)
T KOG4280|consen 152 LSPVN-PKGLELREDPKCGVYVENLSEMDVESAEDAQQLLVVGLANRRVGATSMNEESSRSHAIFTIHIE---------- 220 (574)
T ss_pred hCccC-cCCceeeEcCCCceEecCcceeecCCHHHHHHHHHHHHhhcchhhccCCcccccceEEEEEEEE----------
Confidence 99984 3799999999999999999999999999999999998888877766666655555555555554
Q ss_pred ccceeeeeeeeccchHHHHHHHHhhhcccccccccCCCCCCCceeEEEEEEEEEeecCCCCcccceeeeeeeeeccCCcc
Q psy12523 279 EGEKVARLSLVDLASEEIDSLMAEGNKSRTVAATNMNSESSRSHAVFSVVLTQTLVDTKSGVEGEKVARLSLVDLAGSER 358 (544)
Q Consensus 279 ~~~~v~~~s~v~~~~ee~~~ll~~g~~~R~~~sT~~N~~SSRSH~Ifti~i~q~~~~~~~~~~~~~~s~l~~vDLagse~ 358 (544)
+ ......+......++|+||||||+|+
T Consensus 221 ----------------------------------------------------~-~~~~~~~~~~~~~~rlnlvDLagsEr 247 (574)
T KOG4280|consen 221 ----------------------------------------------------S-SEKSDGGLMSGRSSKLNLVDLAGSER 247 (574)
T ss_pred ----------------------------------------------------e-ecccCCCccccccceeeeeeccchhh
Confidence 4 11112344556789999999999999
Q ss_pred hhccCcchhhhhccccccchhhhHHHHHHHhhcccCCCCCCCCccccchhhHHHHhhhhcCCCCceeeeeeeCCcccchh
Q psy12523 359 AVKTGAVGERLKEGSNINKSLTTLGLVISKLADSTSSSKNKDKFVPYRDSVLTWLLKDNLGGNSKTVMVATVSPAADNYE 438 (544)
Q Consensus 359 ~~~~~~~~~~~~e~~~in~sL~~l~~vi~~La~~~~~~~~~~~~vp~r~SkLT~lL~~~lggns~~~~i~~vsp~~~~~~ 438 (544)
..++++.|++++|+.+||+||++|++||.+|++... .|||||+|+||+|
T Consensus 248 ~~~tga~G~rlkEa~~IN~SLs~LG~vI~aLvd~~~------~HIPYRdSkLT~L------------------------- 296 (574)
T KOG4280|consen 248 QSKTGAEGERLKEATNINLSLSALGNVISALVDGSK------THIPYRDSKLTRL------------------------- 296 (574)
T ss_pred hcccCccchhhhhhcccchhHHHHHHHHHHHhcccc------CCCCcchhHHHHH-------------------------
Confidence 999999999999999999999999999999988532 2777777776665
Q ss_pred hhhccccccccccccccccccccCCCcceEEEEecCCccccHHHHHHhhcchhHHhhhhccceecCCccHHHHHHHHHHH
Q psy12523 439 ETLSTLRYADRAKRIVNHAVDNLGGNSKTVMVATVSPAADNYEETLSTLRYADRAKRIVNHAVVNEDPNARIIRELRQEV 518 (544)
Q Consensus 439 etl~tL~~~~R~sklt~~l~~slggnskt~mi~~iSp~~~~~~eTl~TL~~a~rak~i~n~~~~n~~~~~~~i~~l~~ei 518 (544)
|||||||||||+|||||||++.+++||++||+||+|||.|+|+|++|++++...+++|+.||
T Consensus 297 ------------------LqdSLGGN~kT~mianvsp~~~~~~ETlsTLrfA~Rak~I~nk~~ined~~~~~~~~lq~ei 358 (574)
T KOG4280|consen 297 ------------------LQDSLGGNSKTTMIANVSPSSDNYEETLSTLRFAQRAKAIKNKPVINEDPKDALLRELQEEI 358 (574)
T ss_pred ------------------HHHHcCCCceEEEEEecCchhhhhHHHHHHHHHHHHHHHhhccccccCCcchhhHHHHHHHH
Confidence 45777889999999999999999999999999999999999999999999988999999999
Q ss_pred HHHHHHHHhcCCC
Q psy12523 519 DKLKEMLISAGVP 531 (544)
Q Consensus 519 ~~Lk~~l~~~~~~ 531 (544)
+.||.+|.....+
T Consensus 359 ~~Lk~~l~~~~~~ 371 (574)
T KOG4280|consen 359 ERLKKELDPGGSP 371 (574)
T ss_pred HHHHHhhccccCc
Confidence 9999999887554
No 3
>KOG0241|consensus
Probab=100.00 E-value=2.4e-63 Score=523.01 Aligned_cols=318 Identities=64% Similarity=0.870 Sum_probs=283.2
Q ss_pred eeccCCccccccCcccccccccccchhhhhcccccceeeeecccccccccccccCCCCCchhHHHHHHhhhccccccCCC
Q psy12523 95 VDLAGSERAVKTGAVGERLKEGSNINKQEALESMGISVQASGIKVEKNKYYLVNLNADPSLNELLVYYLKDCTLIGSSDK 174 (544)
Q Consensus 95 vDLAGSEr~~~~~~~g~~~~e~~~in~~~~l~g~~~~i~a~g~~~sgkt~Tl~G~~~~~Gli~~~~~~Lf~~~~~~~~~~ 174 (544)
-++||-|-+-+. .|.-+ .+..+.|++.||+||||+|+||+|||+|....||||||++..||..+...
T Consensus 69 ~n~agQE~Vf~~--lG~~i-------l~naf~GyNaCifaYGQtGsGKsYsmmGt~~QpGiIPrlc~~lFe~I~k~---- 135 (1714)
T KOG0241|consen 69 KNYAGQETVFKC--LGEGI-------LENAFQGYNACIFAYGQTGSGKSYSMMGTAEQPGIIPRLCESLFERIDKE---- 135 (1714)
T ss_pred cccccchhHHHh--cchHH-------HHHHhhccceeeEEecccCCCceeEeeccCCCCCchhHHHHHHHHHHHhc----
Confidence 478898888654 33333 12389999999999999999999999999999999999999999977643
Q ss_pred CCcccceeEEEEEEEeecceeeecCCCCCCCCcceEEEcCCCCceeccCeEEEecCHHHHHHHHHhhhccccceeccCCC
Q psy12523 175 NDIQLSGNLKINFGLFFCFQVHDLLDPKANKQSLKVREHNVLGPYVDGLSQLAVTSFQEIDSLMAEGNKSRTVAATNMNS 254 (544)
Q Consensus 175 ~~~~~~~~v~~S~~Evy~e~v~DLL~~~~~~~~l~i~e~~~~~~~v~~ls~~~v~s~~e~~~ll~~g~~~R~~~~t~~n~ 254 (544)
..+...|+|.+||+|||||+|+|||+|+.+.+.+++++|.--|+|+.||++..|+|++|+-.++
T Consensus 136 ~n~~~tfkVeVSymEIynEkv~DLLdPk~ssqtlkVrehsvlGp~vdGLS~laV~S~qdId~lm---------------- 199 (1714)
T KOG0241|consen 136 SNPSQTFKVEVSYMEIYNEKVRDLLDPKGSSQTLKVREHSVLGPYVDGLSQLAVTSFQDIDSLM---------------- 199 (1714)
T ss_pred cCCCceEEEEEEHHHHhhcchhhhhCCCCCcceeEEeecccccccccchhhhhcccHHHHHHHH----------------
Confidence 3677899999999999999999999999999999999999999999999999999876655555
Q ss_pred CCCCceeEEEEEEEEEeeccCCCcccceeeeeeeeccchHHHHHHHHhhhcccccccccCCCCCCCceeEEEEEEEEEee
Q psy12523 255 ESSRSHAVFSVVLTQTLVDTKSGVEGEKVARLSLVDLASEEIDSLMAEGNKSRTVAATNMNSESSRSHAVFSVVLTQTLV 334 (544)
Q Consensus 255 ~SSRSH~i~~i~v~~~~~~~~~~~~~~~v~~~s~v~~~~ee~~~ll~~g~~~R~~~sT~~N~~SSRSH~Ifti~i~q~~~ 334 (544)
..|+++|++++|+||..|||||+||.+.++|+..
T Consensus 200 ----------------------------------------------~egnKsrtvaatnmn~EssrsHaVFslvvtQ~l~ 233 (1714)
T KOG0241|consen 200 ----------------------------------------------SEGNKSRTVAATNMNEESSRSHAVFSLVVTQTLY 233 (1714)
T ss_pred ----------------------------------------------HhccccceeeeecccccccccceeEEEEEeeEEe
Confidence 5566667778888888999999999999999999
Q ss_pred cCCCCcccceeeeeeeeeccCCcchhccCcchhhhhccccccchhhhHHHHHHHhhcccCCCCCCCCccccchhhHHHHh
Q psy12523 335 DTKSGVEGEKVARLSLVDLAGSERAVKTGAVGERLKEGSNINKSLTTLGLVISKLADSTSSSKNKDKFVPYRDSVLTWLL 414 (544)
Q Consensus 335 ~~~~~~~~~~~s~l~~vDLagse~~~~~~~~~~~~~e~~~in~sL~~l~~vi~~La~~~~~~~~~~~~vp~r~SkLT~lL 414 (544)
+.+.+..+.+.+++++|||||+|++.++++.+.+++|+++||+||..|+.||.+|++... .+++.+++|||||.||.|
T Consensus 234 D~ktg~SgeKvsklslVDLAgserasktga~g~rlkegsNinkSLttLglVIsaLadq~n-~kgkdKfvPYrDSVLTwL- 311 (1714)
T KOG0241|consen 234 DLKTGHSGEKVSKLSLVDLAGSERASKTGAAGSRLKEGSNINKSLTTLGLVISALADQKN-GKGKDKFVPYRDSVLTWL- 311 (1714)
T ss_pred ccccCcchhheeeeeEEEeccccccccccchhhhhhhcCCcchhhHHHHHHHHHHHHhhc-CCCccccccchhHHHHHH-
Confidence 999999999999999999999999999999999999999999999999999999998654 345667778877776655
Q ss_pred hhhcCCCCceeeeeeeCCcccchhhhhccccccccccccccccccccCCCcceEEEEecCCccccHHHHHHhhcchhHHh
Q psy12523 415 KDNLGGNSKTVMVATVSPAADNYEETLSTLRYADRAKRIVNHAVDNLGGNSKTVMVATVSPAADNYEETLSTLRYADRAK 494 (544)
Q Consensus 415 ~~~lggns~~~~i~~vsp~~~~~~etl~tL~~~~R~sklt~~l~~slggnskt~mi~~iSp~~~~~~eTl~TL~~a~rak 494 (544)
|+|+|||||+|+||+||||++.+|+||++||+||.|||
T Consensus 312 ------------------------------------------LkD~LGGNsrTvMiatvSPaAdnyeeTlStLRYadrAk 349 (1714)
T KOG0241|consen 312 ------------------------------------------LKDNLGGNSRTVMIATVSPAADNYEETLSTLRYADRAK 349 (1714)
T ss_pred ------------------------------------------HHhhcCCCceeEEEEEecccccchHHHHHHHHHHHHHH
Confidence 55778889999999999999999999999999999999
Q ss_pred hhhccceecCCccHHHHHHHHHHHHHHHHHHHhcCCC
Q psy12523 495 RIVNHAVVNEDPNARIIRELRQEVDKLKEMLISAGVP 531 (544)
Q Consensus 495 ~i~n~~~~n~~~~~~~i~~l~~ei~~Lk~~l~~~~~~ 531 (544)
+|+|.+++|++++...|++||.|+++|+.+|.+++..
T Consensus 350 rIvN~avvNedpnarvirElReEve~lr~qL~~ae~~ 386 (1714)
T KOG0241|consen 350 RIVNHAVVNEDPNARVIRELREEVEKLREQLEQAEAM 386 (1714)
T ss_pred HhhccccccCCchHHHHHHHHHHHHHHHHHHhhhhhc
Confidence 9999999999999999999999999999999997644
No 4
>KOG0243|consensus
Probab=100.00 E-value=6.7e-61 Score=523.08 Aligned_cols=289 Identities=37% Similarity=0.535 Sum_probs=249.7
Q ss_pred chhhhhcccccceeeeeccccccccccccc--------CCCCCchhHHHHHHhhhccccccCCCCCcccceeEEEEEEEe
Q psy12523 119 INKQEALESMGISVQASGIKVEKNKYYLVN--------LNADPSLNELLVYYLKDCTLIGSSDKNDIQLSGNLKINFGLF 190 (544)
Q Consensus 119 in~~~~l~g~~~~i~a~g~~~sgkt~Tl~G--------~~~~~Gli~~~~~~Lf~~~~~~~~~~~~~~~~~~v~~S~~Ev 190 (544)
|.. ++.||+++||||||+|.||||||+| .+.+.|||||++++||+-+.. ....|+|+|||+|+
T Consensus 121 i~e--Vl~GyNCTIFAYGQTGTGKTyTMeG~~~~~~g~l~~~aGIIPRal~~IFd~Le~-------~~~EYsvKVSfLEL 191 (1041)
T KOG0243|consen 121 IKE--VLEGYNCTIFAYGQTGTGKTYTMEGGERKKNGELPSEAGIIPRALRQIFDTLEA-------QGAEYSVKVSFLEL 191 (1041)
T ss_pred HHH--HhccCCceEEEecCCCCCceeeeecCcccccCCCCccCCcchHHHHHHHHHHHh-------cCCeEEEEEEehhh
Confidence 666 9999999999999999999999999 567789999999999995442 34689999999999
Q ss_pred ecceeeecCCCCCCC-CcceEEEcC-----CCCceeccCeEEEecCHHHHHHHHHhhhccccceeccCCCCCCCceeEEE
Q psy12523 191 FCFQVHDLLDPKANK-QSLKVREHN-----VLGPYVDGLSQLAVTSFQEIDSLMAEGNKSRTVAATNMNSESSRSHAVFS 264 (544)
Q Consensus 191 y~e~v~DLL~~~~~~-~~l~i~e~~-----~~~~~v~~ls~~~v~s~~e~~~ll~~g~~~R~~~~t~~n~~SSRSH~i~~ 264 (544)
|||.++|||++.... ..+.+.+++ .+|++|+||.++.|.++.|+..+|.+|...|++++|.+|..|||||+||+
T Consensus 192 YNEEl~DLLa~~~~~~~~~~~k~~~~~~~~kggV~vkGlEEi~V~~A~ei~klLekGs~kRrtAaTl~N~~SSRSHsIFs 271 (1041)
T KOG0243|consen 192 YNEELTDLLASEDTSDKKLRIKDDSTIVDGKGGVIVKGLEEIIVTNADEIYKLLEKGSKKRRTAATLMNDQSSRSHSIFS 271 (1041)
T ss_pred hhHHHHHhcCCccccccccccccCCcccCCcCcEEEecceeeeecchhHHHHHHHhhhhHhHHHHHHhhhhccccceEEE
Confidence 999999999998654 666666665 68999999999999999999999999999988888888887777777777
Q ss_pred EEEEEEeeccCCCcccceeeeeeeeccchHHHHHHHHhhhcccccccccCCCCCCCceeEEEEEEEEEeecCCCCcccce
Q psy12523 265 VVLTQTLVDTKSGVEGEKVARLSLVDLASEEIDSLMAEGNKSRTVAATNMNSESSRSHAVFSVVLTQTLVDTKSGVEGEK 344 (544)
Q Consensus 265 i~v~~~~~~~~~~~~~~~v~~~s~v~~~~ee~~~ll~~g~~~R~~~sT~~N~~SSRSH~Ifti~i~q~~~~~~~~~~~~~ 344 (544)
|+|... ..+..+.+..+
T Consensus 272 Itvhik---------------------------------------------------------------e~t~~geelvK 288 (1041)
T KOG0243|consen 272 ITVHIK---------------------------------------------------------------ENTPEGEELVK 288 (1041)
T ss_pred EEEEEe---------------------------------------------------------------cCCCcchhhHh
Confidence 766422 11233555678
Q ss_pred eeeeeeeeccCCcchhccCcchhhhhccccccchhhhHHHHHHHhhcccCCCCCCCCccccchhhHHHHhhhhcCCCCce
Q psy12523 345 VARLSLVDLAGSERAVKTGAVGERLKEGSNINKSLTTLGLVISKLADSTSSSKNKDKFVPYRDSVLTWLLKDNLGGNSKT 424 (544)
Q Consensus 345 ~s~l~~vDLagse~~~~~~~~~~~~~e~~~in~sL~~l~~vi~~La~~~~~~~~~~~~vp~r~SkLT~lL~~~lggns~~ 424 (544)
+++|.+|||||||...+.|+.+.|.+|++.||+||.+||+||.+|++. ..|||||+||||+||
T Consensus 289 ~GKLNLVDLAGSENI~RSGA~~~RArEAG~INqSLLTLGRVInALVe~-------s~HIPYRESKLTRLL---------- 351 (1041)
T KOG0243|consen 289 IGKLNLVDLAGSENISRSGARNGRAREAGEINQSLLTLGRVINALVEH-------SGHIPYRESKLTRLL---------- 351 (1041)
T ss_pred hcccceeeccccccccccccccchhHHhhhhhHHHHHHHHHHHHHHcc-------CCCCCchHHHHHHHH----------
Confidence 899999999999999999999999999999999999999999999873 458888887777665
Q ss_pred eeeeeeCCcccchhhhhccccccccccccccccccccCCCcceEEEEecCCccccHHHHHHhhcchhHHhhhhccceecC
Q psy12523 425 VMVATVSPAADNYEETLSTLRYADRAKRIVNHAVDNLGGNSKTVMVATVSPAADNYEETLSTLRYADRAKRIVNHAVVNE 504 (544)
Q Consensus 425 ~~i~~vsp~~~~~~etl~tL~~~~R~sklt~~l~~slggnskt~mi~~iSp~~~~~~eTl~TL~~a~rak~i~n~~~~n~ 504 (544)
||||||..||+|||||||+..+++||++||.||.|||+|+|+|.+|.
T Consensus 352 ---------------------------------QDSLGGkTKT~iIATiSPa~~~lEETlSTLEYA~RAKnIkNKPevNQ 398 (1041)
T KOG0243|consen 352 ---------------------------------QDSLGGKTKTCIIATISPAKHNLEETLSTLEYAHRAKNIKNKPEVNQ 398 (1041)
T ss_pred ---------------------------------HHHhCCCceeEEEEEeCCCcccHHHHHHHHHHHHHhhhccCCCccch
Confidence 56677788889999999999999999999999999999999999998
Q ss_pred C-ccHHHHHHHHHHHHHHHHHHHhcC
Q psy12523 505 D-PNARIIRELRQEVDKLKEMLISAG 529 (544)
Q Consensus 505 ~-~~~~~i~~l~~ei~~Lk~~l~~~~ 529 (544)
. ....++++|-.||.+||..|.-+.
T Consensus 399 kl~K~~llKd~~~EIerLK~dl~AaR 424 (1041)
T KOG0243|consen 399 KLMKKTLLKDLYEEIERLKRDLAAAR 424 (1041)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhH
Confidence 4 455688999999999999997663
No 5
>PLN03188 kinesin-12 family protein; Provisional
Probab=100.00 E-value=3.2e-59 Score=514.45 Aligned_cols=298 Identities=37% Similarity=0.519 Sum_probs=243.2
Q ss_pred hhhcccccceeeeecccccccccccccCC----------CCCchhHHHHHHhhhccccccCCCCCcccceeEEEEEEEee
Q psy12523 122 QEALESMGISVQASGIKVEKNKYYLVNLN----------ADPSLNELLVYYLKDCTLIGSSDKNDIQLSGNLKINFGLFF 191 (544)
Q Consensus 122 ~~~l~g~~~~i~a~g~~~sgkt~Tl~G~~----------~~~Gli~~~~~~Lf~~~~~~~~~~~~~~~~~~v~~S~~Evy 191 (544)
+.++.|++.||+||||+|+||||||+|+. .++|||||++++||+.+........+....|.|++||+|||
T Consensus 159 ~svLdGyNaTIFAYGQTGSGKTYTM~G~~~~~~de~~s~~e~GIIPRaledLF~~I~e~q~k~~d~~~~y~V~vSyLEIY 238 (1320)
T PLN03188 159 ENCLAGFNSSVFAYGQTGSGKTYTMWGPANGLLEEHLSGDQQGLTPRVFERLFARINEEQIKHADRQLKYQCRCSFLEIY 238 (1320)
T ss_pred HHHhcCCcceeecCCCCCCCCCEeeCCCCCcccccccccccCCchHHHHHHHHHHHHhhhhhccccccceEEEEEEEeee
Confidence 44999999999999999999999999964 45899999999999987665445555677899999999999
Q ss_pred cceeeecCCCCCCCCcceEEEcCCCCceeccCeEEEecCHHHHHHHHHhhhccccceeccCCCCCCCceeEEEEEEEEEe
Q psy12523 192 CFQVHDLLDPKANKQSLKVREHNVLGPYVDGLSQLAVTSFQEIDSLMAEGNKSRTVAATNMNSESSRSHAVFSVVLTQTL 271 (544)
Q Consensus 192 ~e~v~DLL~~~~~~~~l~i~e~~~~~~~v~~ls~~~v~s~~e~~~ll~~g~~~R~~~~t~~n~~SSRSH~i~~i~v~~~~ 271 (544)
||+|+|||++. ...+.|++|+.+|++|.||+++.|.|++|+..+|..|..+|++++|.+|..|||||+||+|+|.+..
T Consensus 239 NEkI~DLLsp~--~k~L~IRED~kgGv~VeGLTEv~V~S~ED~l~LL~~G~~nR~tasT~mN~~SSRSHaIFtI~Ves~~ 316 (1320)
T PLN03188 239 NEQITDLLDPS--QKNLQIREDVKSGVYVENLTEEYVKTMKDVTQLLIKGLSNRRTGATSINAESSRSHSVFTCVVESRC 316 (1320)
T ss_pred cCcceeccccc--cCCceEEEcCCCCeEeCCCeEEeCCCHHHHHHHHHHHhccceeccCCCCCccCCCceeEEEEEEEee
Confidence 99999999986 5679999999999999999999999999999999999999888888888877777777777665431
Q ss_pred eccCCCcccceeeeeeeeccchHHHHHHHHhhhcccccccccCCCCCCCceeEEEEEEEEEeecCCCCcccceeeeeeee
Q psy12523 272 VDTKSGVEGEKVARLSLVDLASEEIDSLMAEGNKSRTVAATNMNSESSRSHAVFSVVLTQTLVDTKSGVEGEKVARLSLV 351 (544)
Q Consensus 272 ~~~~~~~~~~~v~~~s~v~~~~ee~~~ll~~g~~~R~~~sT~~N~~SSRSH~Ifti~i~q~~~~~~~~~~~~~~s~l~~v 351 (544)
.....+......++|+||
T Consensus 317 --------------------------------------------------------------k~~~dg~ss~r~SkLnLV 334 (1320)
T PLN03188 317 --------------------------------------------------------------KSVADGLSSFKTSRINLV 334 (1320)
T ss_pred --------------------------------------------------------------cccCCCCcceEEEEEEEE
Confidence 111222233467899999
Q ss_pred eccCCcchhccCcchhhhhccccccchhhhHHHHHHHhhcccCCCCCCCCccccchhhHHHHhhhhcCCCCceeeeeeeC
Q psy12523 352 DLAGSERAVKTGAVGERLKEGSNINKSLTTLGLVISKLADSTSSSKNKDKFVPYRDSVLTWLLKDNLGGNSKTVMVATVS 431 (544)
Q Consensus 352 DLagse~~~~~~~~~~~~~e~~~in~sL~~l~~vi~~La~~~~~~~~~~~~vp~r~SkLT~lL~~~lggns~~~~i~~vs 431 (544)
||||+|+...+++.+.+++|+.+||+||++|++||.+|+.... ..+..|||||+|+||+|
T Consensus 335 DLAGSER~kkTga~G~RLkEA~~INKSLsaLGnVI~ALae~Sq--~gk~~HIPYRDSKLTrL------------------ 394 (1320)
T PLN03188 335 DLAGSERQKLTGAAGDRLKEAGNINRSLSQLGNLINILAEISQ--TGKQRHIPYRDSRLTFL------------------ 394 (1320)
T ss_pred ECCCchhccccCcccHHHHHHHHHhHHHHHHHHHHHHHHHhhc--cCCCCcCCCCcchHHHH------------------
Confidence 9999999999999999999999999999999999999986432 12334666666665555
Q ss_pred CcccchhhhhccccccccccccccccccccCCCcceEEEEecCCccccHHHHHHhhcchhHHhhhhccceecCCccHHHH
Q psy12523 432 PAADNYEETLSTLRYADRAKRIVNHAVDNLGGNSKTVMVATVSPAADNYEETLSTLRYADRAKRIVNHAVVNEDPNARII 511 (544)
Q Consensus 432 p~~~~~~etl~tL~~~~R~sklt~~l~~slggnskt~mi~~iSp~~~~~~eTl~TL~~a~rak~i~n~~~~n~~~~~~~i 511 (544)
|+++|||||||+||+||||+..++.||++||+||+|||.|+|+|++|+..... +
T Consensus 395 -------------------------LQDSLGGNSKTvMIa~VSPs~~~~eETLSTLrFAsRAK~IKNkpvvNe~~~~~-v 448 (1320)
T PLN03188 395 -------------------------LQESLGGNAKLAMVCAISPSQSCKSETFSTLRFAQRAKAIKNKAVVNEVMQDD-V 448 (1320)
T ss_pred -------------------------HHHhcCCCceEEEEEecCCchhhHHHHHHHHHHHHHHhhcCccceeccchhhh-H
Confidence 55667788888899999999999999999999999999999999999865432 3
Q ss_pred HHHHHHHHHHHHHHHhcC
Q psy12523 512 RELRQEVDKLKEMLISAG 529 (544)
Q Consensus 512 ~~l~~ei~~Lk~~l~~~~ 529 (544)
..|+++|++|+.+|.+.+
T Consensus 449 n~LrelIr~Lk~EL~rLK 466 (1320)
T PLN03188 449 NFLREVIRQLRDELQRVK 466 (1320)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 445555555555554443
No 6
>KOG0242|consensus
Probab=100.00 E-value=1.5e-56 Score=488.98 Aligned_cols=286 Identities=35% Similarity=0.535 Sum_probs=244.5
Q ss_pred hhhhcccccceeeeecccccccccccccCCCCCchhHHHHHHhhhccccccCCCCCcccceeEEEEEEEeecceeeecCC
Q psy12523 121 KQEALESMGISVQASGIKVEKNKYYLVNLNADPSLNELLVYYLKDCTLIGSSDKNDIQLSGNLKINFGLFFCFQVHDLLD 200 (544)
Q Consensus 121 ~~~~l~g~~~~i~a~g~~~sgkt~Tl~G~~~~~Gli~~~~~~Lf~~~~~~~~~~~~~~~~~~v~~S~~Evy~e~v~DLL~ 200 (544)
...++.|+|.+|||||++|+||||||.|...+||++|.++.+||+.+.... ...|.|.+||+|||||.|+|||+
T Consensus 79 v~~~l~G~N~TVFAYG~TgSGKTyTM~G~~~~PGii~la~~dif~~I~~~~------~r~f~v~vSYlEIYNE~I~DLL~ 152 (675)
T KOG0242|consen 79 LLSVLEGFNATVFAYGQTGSGKTYTMSGSEDDPGIIPLAMKDIFEKIDKSG------EREFSVRVSYLEIYNERIRDLLN 152 (675)
T ss_pred HHHHhcCcccceeeecCCCCCCceEEeccCCCCCeeehHHHHHHHHHHhcC------CceeEEEEEEEEEeccccccccC
Confidence 345999999999999999999999999999999999999999999776543 56799999999999999999999
Q ss_pred CCCCCCcceEEEcCCCCceeccCeEEEecCHHHHHHHHHhhhccccceeccCCCCCCCceeEEEEEEEEEeeccCCCccc
Q psy12523 201 PKANKQSLKVREHNVLGPYVDGLSQLAVTSFQEIDSLMAEGNKSRTVAATNMNSESSRSHAVFSVVLTQTLVDTKSGVEG 280 (544)
Q Consensus 201 ~~~~~~~l~i~e~~~~~~~v~~ls~~~v~s~~e~~~ll~~g~~~R~~~~t~~n~~SSRSH~i~~i~v~~~~~~~~~~~~~ 280 (544)
|. ...+.++||+.+|++|.||++..|.|++++.++|..|..+|+++.|.+|..|||||+||+|.+.++.
T Consensus 153 ~~--~~~L~irED~~~gi~V~gL~e~~v~s~e~~~~ll~~g~~~R~~g~T~~N~~SSRSHaIl~i~i~s~~--------- 221 (675)
T KOG0242|consen 153 PD--GGDLRLREDSEGGIVVPGLTEETVSSREELLELLQKGNKNRTTGETNLNEQSSRSHAILRITVESRG--------- 221 (675)
T ss_pred CC--CCCceEeEcCCCCEEecCCeeecCCCHHHHHHHHHHhhccCcccccccccccchhhheeeEEEEecc---------
Confidence 97 4559999999999999999999999999999999999988888888888777777777777665431
Q ss_pred ceeeeeeeeccchHHHHHHHHhhhcccccccccCCCCCCCceeEEEEEEEEEeecCCCCcccceeeeeeeeeccCCcchh
Q psy12523 281 EKVARLSLVDLASEEIDSLMAEGNKSRTVAATNMNSESSRSHAVFSVVLTQTLVDTKSGVEGEKVARLSLVDLAGSERAV 360 (544)
Q Consensus 281 ~~v~~~s~v~~~~ee~~~ll~~g~~~R~~~sT~~N~~SSRSH~Ifti~i~q~~~~~~~~~~~~~~s~l~~vDLagse~~~ 360 (544)
.... . ..+.|+||||||+|++.
T Consensus 222 -----------------------------------------------------~~~~----~-~~s~L~lIDLAGSERas 243 (675)
T KOG0242|consen 222 -----------------------------------------------------REAS----S-RVSKLNLIDLAGSERAS 243 (675)
T ss_pred -----------------------------------------------------cccc----c-hhheehhhhhhhhhhhh
Confidence 1111 0 45679999999999999
Q ss_pred ccCcchhhhhccccccchhhhHHHHHHHhhcccCCCCCCCCccccchhhHHHHhhhhcCCCCceeeeeeeCCcccchhhh
Q psy12523 361 KTGAVGERLKEGSNINKSLTTLGLVISKLADSTSSSKNKDKFVPYRDSVLTWLLKDNLGGNSKTVMVATVSPAADNYEET 440 (544)
Q Consensus 361 ~~~~~~~~~~e~~~in~sL~~l~~vi~~La~~~~~~~~~~~~vp~r~SkLT~lL~~~lggns~~~~i~~vsp~~~~~~et 440 (544)
.+++.|.|++||.+||+||.+|+.||.+|..... ..|+||||
T Consensus 244 ~T~~~G~RlkEG~~INrSLlaLgtVI~~Ls~~~~-----~~hipYRD--------------------------------- 285 (675)
T KOG0242|consen 244 RTGNEGVRLKEGAHINRSLLALGTVINKLSEGKR-----PRHIPYRD--------------------------------- 285 (675)
T ss_pred hhhccceeccccchhhHHHHHHHHHHHHHccccc-----cCCCCccc---------------------------------
Confidence 9999999999999999999999999999976422 22455555
Q ss_pred hccccccccccccccccccccCCCcceEEEEecCCccccHHHHHHhhcchhHHhhhhccceecCCc-cHHHHHHHHHHHH
Q psy12523 441 LSTLRYADRAKRIVNHAVDNLGGNSKTVMVATVSPAADNYEETLSTLRYADRAKRIVNHAVVNEDP-NARIIRELRQEVD 519 (544)
Q Consensus 441 l~tL~~~~R~sklt~~l~~slggnskt~mi~~iSp~~~~~~eTl~TL~~a~rak~i~n~~~~n~~~-~~~~i~~l~~ei~ 519 (544)
|||||+||++|||||+|+|||||+|+..+|+||++||+||.|||.|++++.+|... +..++..+++++.
T Consensus 286 ----------SKLTRiLq~sLgGn~rt~~I~tisp~~~~~~eT~nTL~fAsrak~i~~~~~~n~~~~~~~~~~~~~~~i~ 355 (675)
T KOG0242|consen 286 ----------SKLTRLLQDSLGGNARTAIIATISPSSSHYEETKNTLKFASRAKEITTKAQVNVILSDKALLKYLQREIA 355 (675)
T ss_pred ----------cHHHHhchhhcCCCccEEEEEEeCchhhHHHHHHHHHHHHHHhhhcccccccceecchhhhhHHHHHHHH
Confidence 55556667888899999999999999999999999999999999999999999844 3445566679999
Q ss_pred HHHHHHHhcC
Q psy12523 520 KLKEMLISAG 529 (544)
Q Consensus 520 ~Lk~~l~~~~ 529 (544)
+|+.++.+..
T Consensus 356 ~l~~e~~~~~ 365 (675)
T KOG0242|consen 356 ELEAELERLK 365 (675)
T ss_pred HHHHHHHhhc
Confidence 9999998744
No 7
>cd01373 KISc_KLP2_like Kinesin motor domain, KLP2-like subgroup. Members of this subgroup seem to play a role in mitosis and meiosis. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In most kinesins, the motor domain is found at the N-terminus (N-type). N-type kinesins are (+) end-directed motors, i.e. they transport cargo towards the (+) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain, which repositions the other head domain through the coiled-coil domain close to a second
Probab=100.00 E-value=4e-55 Score=449.63 Aligned_cols=262 Identities=42% Similarity=0.567 Sum_probs=220.7
Q ss_pred hhhcccccceeeeecccccccccccccCCC--------CCchhHHHHHHhhhccccccCCCCCcccceeEEEEEEEeecc
Q psy12523 122 QEALESMGISVQASGIKVEKNKYYLVNLNA--------DPSLNELLVYYLKDCTLIGSSDKNDIQLSGNLKINFGLFFCF 193 (544)
Q Consensus 122 ~~~l~g~~~~i~a~g~~~sgkt~Tl~G~~~--------~~Gli~~~~~~Lf~~~~~~~~~~~~~~~~~~v~~S~~Evy~e 193 (544)
+.++.|++.||+|||++|+||||||+|+.. ++||+||++++||+.+..... +.+....|.|++||+|||||
T Consensus 68 ~~~~~G~n~ti~aYGqTGSGKTyTm~G~~~~~~~~~~~~~Giipr~~~~Lf~~i~~~~~-~~~~~~~~~v~~S~~EIyne 146 (337)
T cd01373 68 EDCLSGYNGSIFAYGQTGSGKTYTMMGPSSSDDESPHGLQGVIPRIFEYLFSLIQREEE-KRGDGLKFLCKCSFLEIYNE 146 (337)
T ss_pred HHHhCCCceeEEEeCCCCCCceEEecCCCCccccccccCCCHHHHHHHHHHHHHHhhhh-hcccCceEEEEEEEEeecCC
Confidence 348999999999999999999999999753 589999999999997654432 23356789999999999999
Q ss_pred eeeecCCCCCCCCcceEEEcCCCCceeccCeEEEecCHHHHHHHHHhhhccccceeccCCCCCCCceeEEEEEEEEEeec
Q psy12523 194 QVHDLLDPKANKQSLKVREHNVLGPYVDGLSQLAVTSFQEIDSLMAEGNKSRTVAATNMNSESSRSHAVFSVVLTQTLVD 273 (544)
Q Consensus 194 ~v~DLL~~~~~~~~l~i~e~~~~~~~v~~ls~~~v~s~~e~~~ll~~g~~~R~~~~t~~n~~SSRSH~i~~i~v~~~~~~ 273 (544)
+|+|||++. ...+++++++.++++++|++++.|.|++|+.++|..|..+|+.++|.+|..|||||+||+|.|.+..
T Consensus 147 ~v~DLL~~~--~~~l~i~e~~~~~~~v~gl~~~~v~s~~e~~~ll~~g~~~R~~~~t~~n~~SSRSH~i~~i~v~~~~-- 222 (337)
T cd01373 147 QITDLLDPT--SRNLKIREDIKKGVYVENLTEEYVSSYEDVYQVLLKGLSNRKVAATSMNSESSRSHAVFTCTIESWE-- 222 (337)
T ss_pred EeeeCCCCC--CCCceEEECCCCCEEeCCCEEEEeCCHHHHHHHHHHHHhccCcccCcCCCCCCCccEEEEEEEEEee--
Confidence 999999876 4679999999999999999999999999999999999999998888888888888777777765331
Q ss_pred cCCCcccceeeeeeeeccchHHHHHHHHhhhcccccccccCCCCCCCceeEEEEEEEEEeecCCCCcccceeeeeeeeec
Q psy12523 274 TKSGVEGEKVARLSLVDLASEEIDSLMAEGNKSRTVAATNMNSESSRSHAVFSVVLTQTLVDTKSGVEGEKVARLSLVDL 353 (544)
Q Consensus 274 ~~~~~~~~~v~~~s~v~~~~ee~~~ll~~g~~~R~~~sT~~N~~SSRSH~Ifti~i~q~~~~~~~~~~~~~~s~l~~vDL 353 (544)
. .........++|+||||
T Consensus 223 ------------------------------------------------------------~--~~~~~~~~~s~l~~VDL 240 (337)
T cd01373 223 ------------------------------------------------------------K--KASSTNIRTSRLNLVDL 240 (337)
T ss_pred ------------------------------------------------------------c--CCCCCcEEEEEEEEEEC
Confidence 0 11112345689999999
Q ss_pred cCCcchhccCcchhhhhccccccchhhhHHHHHHHhhcccCCCCCCCCccccchhhHHHHhhhhcCCCCceeeeeeeCCc
Q psy12523 354 AGSERAVKTGAVGERLKEGSNINKSLTTLGLVISKLADSTSSSKNKDKFVPYRDSVLTWLLKDNLGGNSKTVMVATVSPA 433 (544)
Q Consensus 354 agse~~~~~~~~~~~~~e~~~in~sL~~l~~vi~~La~~~~~~~~~~~~vp~r~SkLT~lL~~~lggns~~~~i~~vsp~ 433 (544)
||+|+....++.+.+++|+..||+||.+|+.||.+|+.... .+..++|||+|+||++|+
T Consensus 241 AGSEr~~~~~~~g~~~~E~~~IN~SL~~L~~vi~aL~~~~~---~~~~~ipyR~SkLT~lL~------------------ 299 (337)
T cd01373 241 AGSERQKDDGAEGVRLKEAKNINKSLSTLGHVIMALVDVAH---GKQRHVPYRDSKLTFLLR------------------ 299 (337)
T ss_pred CCCCcccccCCccHhhhhhccccHHHHHHHHHHHHHHhhcc---CCCCccCCcccHHHHHHH------------------
Confidence 99999999999999999999999999999999999986432 235577777777766655
Q ss_pred ccchhhhhccccccccccccccccccccCCCcceEEEEecCCccccHHHHHHhhcchhHHhhh
Q psy12523 434 ADNYEETLSTLRYADRAKRIVNHAVDNLGGNSKTVMVATVSPAADNYEETLSTLRYADRAKRI 496 (544)
Q Consensus 434 ~~~~~etl~tL~~~~R~sklt~~l~~slggnskt~mi~~iSp~~~~~~eTl~TL~~a~rak~i 496 (544)
++|||||+|+||+||||+..+++||++||+||.|||+|
T Consensus 300 -------------------------dsLggns~t~~I~~vsP~~~~~~eTl~TL~fa~rak~I 337 (337)
T cd01373 300 -------------------------DSLGGNAKTTIIANVSPSSKCFGETLSTLKFAQRAKLI 337 (337)
T ss_pred -------------------------HhcCCCceEEEEEEECCCcccHHHHHHHHHHHHHhhcC
Confidence 55667788888888888889999999999999999986
No 8
>cd01370 KISc_KIP3_like Kinesin motor domain, KIP3-like subgroup. The yeast kinesin KIP3 plays a role in positioning the mitotic spindle. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In most kinesins, the motor domain is found at the N-terminus (N-type). N-type kinesins are (+) end-directed motors, i.e. they transport cargo towards the (+) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain, which repositions the other head domain through the coiled-coil domain close to a sec
Probab=100.00 E-value=1.3e-54 Score=446.04 Aligned_cols=258 Identities=40% Similarity=0.538 Sum_probs=220.4
Q ss_pred hhhcccccceeeeecccccccccccccCCCCCchhHHHHHHhhhccccccCCCCCcccceeEEEEEEEeecceeeecCCC
Q psy12523 122 QEALESMGISVQASGIKVEKNKYYLVNLNADPSLNELLVYYLKDCTLIGSSDKNDIQLSGNLKINFGLFFCFQVHDLLDP 201 (544)
Q Consensus 122 ~~~l~g~~~~i~a~g~~~sgkt~Tl~G~~~~~Gli~~~~~~Lf~~~~~~~~~~~~~~~~~~v~~S~~Evy~e~v~DLL~~ 201 (544)
+.++.|++.||+|||++|+||||||+|++.++||+|+++++||+.+.... ....|.|++||+|||||+|+|||++
T Consensus 81 ~~~~~G~n~~i~ayGqtGSGKTyTm~G~~~~~Giipr~~~~LF~~i~~~~-----~~~~~~v~vS~~EIyne~v~DLL~~ 155 (338)
T cd01370 81 DGVLNGYNATVFAYGATGAGKTHTMLGTDSDPGLMVLTMKDLFDKIEERK-----DDKEFEVSLSYLEIYNETIRDLLSP 155 (338)
T ss_pred HHHHCCCCceEEeeCCCCCCCeEEEcCCCCCCchHHHHHHHHHHhhhhcc-----cCceEEEEEEEEEEECCEEEECCCC
Confidence 44899999999999999999999999999999999999999999766533 3468999999999999999999998
Q ss_pred CCCCCcceEEEcCCCCceeccCeEEEecCHHHHHHHHHhhhccccceeccCCCCCCCceeEEEEEEEEEeeccCCCcccc
Q psy12523 202 KANKQSLKVREHNVLGPYVDGLSQLAVTSFQEIDSLMAEGNKSRTVAATNMNSESSRSHAVFSVVLTQTLVDTKSGVEGE 281 (544)
Q Consensus 202 ~~~~~~l~i~e~~~~~~~v~~ls~~~v~s~~e~~~ll~~g~~~R~~~~t~~n~~SSRSH~i~~i~v~~~~~~~~~~~~~~ 281 (544)
. ..++++++|+.+++++.|++++.|+|++|++++|+.|.++|++++|.+|..|||||+||+|.+.+..
T Consensus 156 ~--~~~l~i~ed~~~~~~v~gl~~~~v~s~~e~~~~l~~g~~~R~~~~t~~n~~SSRSH~i~~i~i~~~~---------- 223 (338)
T cd01370 156 S--SGPLELREDPNQGIVVAGLTEHQPKSAEEILELLMKGNRNRTQEPTEANATSSRSHAVLQITVRQKD---------- 223 (338)
T ss_pred C--CCCceEEEcCCCCEEeCCcEEEEeCCHHHHHHHHHHHHhhcccccccccCccCcceEEEEEEEEEEe----------
Confidence 6 6789999999999999999999999999999999999999988888888877777777777765441
Q ss_pred eeeeeeeeccchHHHHHHHHhhhcccccccccCCCCCCCceeEEEEEEEEEeecCCCCcccceeeeeeeeeccCCcchhc
Q psy12523 282 KVARLSLVDLASEEIDSLMAEGNKSRTVAATNMNSESSRSHAVFSVVLTQTLVDTKSGVEGEKVARLSLVDLAGSERAVK 361 (544)
Q Consensus 282 ~v~~~s~v~~~~ee~~~ll~~g~~~R~~~sT~~N~~SSRSH~Ifti~i~q~~~~~~~~~~~~~~s~l~~vDLagse~~~~ 361 (544)
.. .........++|+||||||+|+...
T Consensus 224 ----------------------------------------------------~~-~~~~~~~~~s~l~~VDLAGsEr~~~ 250 (338)
T cd01370 224 ----------------------------------------------------RT-ASINQQVRIGKLSLIDLAGSERASA 250 (338)
T ss_pred ----------------------------------------------------cC-CCCCCcEEEEEEEEEECCCCccccc
Confidence 11 1112335678999999999999999
Q ss_pred cCcchhhhhccccccchhhhHHHHHHHhhcccCCCCCCCCccccchhhHHHHhhhhcCCCCceeeeeeeCCcccchhhhh
Q psy12523 362 TGAVGERLKEGSNINKSLTTLGLVISKLADSTSSSKNKDKFVPYRDSVLTWLLKDNLGGNSKTVMVATVSPAADNYEETL 441 (544)
Q Consensus 362 ~~~~~~~~~e~~~in~sL~~l~~vi~~La~~~~~~~~~~~~vp~r~SkLT~lL~~~lggns~~~~i~~vsp~~~~~~etl 441 (544)
.+..+.+++|+..||+||.+|+.||.+|+.... ...++|||+|+||++|
T Consensus 251 ~~~~g~~~~E~~~IN~SL~~L~~vi~~L~~~~~----~~~~ipyR~SkLT~lL--------------------------- 299 (338)
T cd01370 251 TNNRGQRLKEGANINRSLLALGNCINALVDGKK----KNKHIPYRDSKLTRLL--------------------------- 299 (338)
T ss_pred cCCCCccccccchhhHHHHHHHHHHHHHHhccC----CCCcCCCcCCHHHHHH---------------------------
Confidence 999999999999999999999999999987532 2346666666666554
Q ss_pred ccccccccccccccccccccCCCcceEEEEecCCccccHHHHHHhhcchhHHhhh
Q psy12523 442 STLRYADRAKRIVNHAVDNLGGNSKTVMVATVSPAADNYEETLSTLRYADRAKRI 496 (544)
Q Consensus 442 ~tL~~~~R~sklt~~l~~slggnskt~mi~~iSp~~~~~~eTl~TL~~a~rak~i 496 (544)
+++|||||||+||+||||+..+++||++||+||+|||+|
T Consensus 300 ----------------~d~Lggn~~t~~I~~vsp~~~~~~eTl~TL~fa~ra~~I 338 (338)
T cd01370 300 ----------------KDSLGGNCKTVMIANISPSSSHYEETHNTLKYANRAKNI 338 (338)
T ss_pred ----------------HHhcCCCCeEEEEEEeCCchhhHHHHHHHHHHHHHhccC
Confidence 556677788888888888889999999999999999986
No 9
>KOG0240|consensus
Probab=100.00 E-value=5.4e-55 Score=446.26 Aligned_cols=297 Identities=37% Similarity=0.492 Sum_probs=238.3
Q ss_pred ccccccCcccccccc-cccchhhhhcccccceeeeecccccccccccccCCCC---CchhHHHHHHhhhccccccCCCCC
Q psy12523 101 ERAVKTGAVGERLKE-GSNINKQEALESMGISVQASGIKVEKNKYYLVNLNAD---PSLNELLVYYLKDCTLIGSSDKND 176 (544)
Q Consensus 101 Er~~~~~~~g~~~~e-~~~in~~~~l~g~~~~i~a~g~~~sgkt~Tl~G~~~~---~Gli~~~~~~Lf~~~~~~~~~~~~ 176 (544)
.|+-...++-++.-+ +..--...+|.|++.+|+||||+++||||||.|...+ .||+||++++||+++.. .+
T Consensus 54 DrVF~pnatQe~Vy~~~a~~Iv~dVL~GYNGTvfaYGqT~sGKTytm~G~~~d~~~~GIipRi~~diF~~Iys-----~~ 128 (607)
T KOG0240|consen 54 DRVFSPNATQEDVYEFAAKPIVDDVLLGYNGTVFAYGQTGSGKTYTMEGIGHDPEEMGIIPRILNDIFDHIYS-----ME 128 (607)
T ss_pred eeecCCCccHHHHHHHHHHHHHHHHhcccceeEEEecCCCCCcceeecccCCChhhcCcHHHHHHHHHHHHhc-----Cc
Confidence 344444444444443 3332334599999999999999999999999998774 59999999999998764 34
Q ss_pred cccceeEEEEEEEeecceeeecCCCCCCCCcceEEEcCCCCceeccCeEEEecCHHHHHHHHHhhhccccceeccCCCCC
Q psy12523 177 IQLSGNLKINFGLFFCFQVHDLLDPKANKQSLKVREHNVLGPYVDGLSQLAVTSFQEIDSLMAEGNKSRTVAATNMNSES 256 (544)
Q Consensus 177 ~~~~~~v~~S~~Evy~e~v~DLL~~~~~~~~l~i~e~~~~~~~v~~ls~~~v~s~~e~~~ll~~g~~~R~~~~t~~n~~S 256 (544)
.+..|.|+|||||||.|+++|||+|. +.++.+++|...+++|+|+++..|.+.+++++.++.|..+|+.+.|.||.
T Consensus 129 ~n~efhVkVsy~EIYmEKi~DLL~~~--k~nlsvheDK~~v~~vkG~t~~~v~s~d~v~~~i~~g~~nr~va~t~mn~-- 204 (607)
T KOG0240|consen 129 ENLEFHVKVSYFEIYMEKIRDLLDPE--KTNLSVHEDKNRVPYVKGVTERFVSSPDEVLDVIDEGKSNRHVAVTNMNE-- 204 (607)
T ss_pred ccceEEEEEEeehhhhhHHHHHhCcc--cCCceeecccCCCceecCceeEEecCHHHHHHHHhcccccchhhhccccc--
Confidence 45789999999999999999999986 78999999999999999999999999999999999887777665555555
Q ss_pred CCceeEEEEEEEEEeeccCCCcccceeeeeeeeccchHHHHHHHHhhhcccccccccCCCCCCCceeEEEEEEEEEeecC
Q psy12523 257 SRSHAVFSVVLTQTLVDTKSGVEGEKVARLSLVDLASEEIDSLMAEGNKSRTVAATNMNSESSRSHAVFSVVLTQTLVDT 336 (544)
Q Consensus 257 SRSH~i~~i~v~~~~~~~~~~~~~~~v~~~s~v~~~~ee~~~ll~~g~~~R~~~sT~~N~~SSRSH~Ifti~i~q~~~~~ 336 (544)
+|||||.||+|+|.|....
T Consensus 205 ------------------------------------------------------------~sSRSHsIF~i~VkQ~n~e- 223 (607)
T KOG0240|consen 205 ------------------------------------------------------------HSSRSHSIFLIHVKQENVE- 223 (607)
T ss_pred ------------------------------------------------------------cccccceEEEEEEEecccc-
Confidence 5555555555555554322
Q ss_pred CCCcccceeeeeeeeeccCCcchhccCcchhhhhccccccchhhhHHHHHHHhhcccCCCCCCCCccccchhhHHHHhhh
Q psy12523 337 KSGVEGEKVARLSLVDLAGSERAVKTGAVGERLKEGSNINKSLTTLGLVISKLADSTSSSKNKDKFVPYRDSVLTWLLKD 416 (544)
Q Consensus 337 ~~~~~~~~~s~l~~vDLagse~~~~~~~~~~~~~e~~~in~sL~~l~~vi~~La~~~~~~~~~~~~vp~r~SkLT~lL~~ 416 (544)
......++|.+|||||+|+..++++.|.-+.|++.||+||.+|++||.+||.+. ..|+|||+|+||++|
T Consensus 224 ---~~~~~~gkLyLVDLaGSEkvsKtga~g~vleEaK~INkSLsaLgnvI~aLa~g~------~shipYRDSKLTRIL-- 292 (607)
T KOG0240|consen 224 ---DKRKLSGKLYLVDLAGSEKVSKTGAEGAVLEEAKNINKSLSALGNVINALAEGP------KSHIPYRDSKLTRIL-- 292 (607)
T ss_pred ---chhhccccEEEEEcccccccCCCCccchhHHHHhhhhhhHHHHHHHHHHHhcCC------CCCCcchhhHHHHHH--
Confidence 233577899999999999999999999999999999999999999999998853 457777777766655
Q ss_pred hcCCCCceeeeeeeCCcccchhhhhccccccccccccccccccccCCCcceEEEEecCCccccHHHHHHhhcchhHHhhh
Q psy12523 417 NLGGNSKTVMVATVSPAADNYEETLSTLRYADRAKRIVNHAVDNLGGNSKTVMVATVSPAADNYEETLSTLRYADRAKRI 496 (544)
Q Consensus 417 ~lggns~~~~i~~vsp~~~~~~etl~tL~~~~R~sklt~~l~~slggnskt~mi~~iSp~~~~~~eTl~TL~~a~rak~i 496 (544)
+++|||||||.+|.|+||+..+..||.+||+|++|||.|
T Consensus 293 -----------------------------------------qdSLGGNsRTtlIi~csPss~n~~ET~STl~fg~rak~i 331 (607)
T KOG0240|consen 293 -----------------------------------------QDSLGGNSRTTLIICCSPSSLNEAETKSTLRFGNRAKTI 331 (607)
T ss_pred -----------------------------------------HHHhCCCcceEEEEecCCccccccccccchhhccccccc
Confidence 466677777777888888889999999999999999999
Q ss_pred hccceecCCccHHH-HHHHHHHHH
Q psy12523 497 VNHAVVNEDPNARI-IRELRQEVD 519 (544)
Q Consensus 497 ~n~~~~n~~~~~~~-i~~l~~ei~ 519 (544)
+|.+.+|.+...+. .+.|+.+-+
T Consensus 332 kN~v~~n~e~~~e~~~r~~e~~kd 355 (607)
T KOG0240|consen 332 KNTVWVNLELTAEEWKRKLEKKKD 355 (607)
T ss_pred cchhhhhhHhhHHHHHHHHHHHHh
Confidence 99999998765543 344444433
No 10
>cd01368 KISc_KIF23_like Kinesin motor domain, KIF23-like subgroup. Members of this group may play a role in mitosis. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In most kinesins, the motor domain is found at the N-terminus (N-type). N-type kinesins are (+) end-directed motors, i.e. they transport cargo towards the (+) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain, which repositions the other head domain through the coiled-coil domain close to a second tubulin dimer, a
Probab=100.00 E-value=2.2e-53 Score=437.80 Aligned_cols=259 Identities=34% Similarity=0.496 Sum_probs=218.9
Q ss_pred hhcccccceeeeecccccccccccccCCCCCchhHHHHHHhhhccccccCCCCCcccceeEEEEEEEeecceeeecCCCC
Q psy12523 123 EALESMGISVQASGIKVEKNKYYLVNLNADPSLNELLVYYLKDCTLIGSSDKNDIQLSGNLKINFGLFFCFQVHDLLDPK 202 (544)
Q Consensus 123 ~~l~g~~~~i~a~g~~~sgkt~Tl~G~~~~~Gli~~~~~~Lf~~~~~~~~~~~~~~~~~~v~~S~~Evy~e~v~DLL~~~ 202 (544)
.++.|++.+|+|||++|+||||||+|++.++|||||++++||+.+.. |.|++||+|||||+|+|||++.
T Consensus 83 ~~l~G~n~ti~aYGqtGSGKTyTm~G~~~~~Gli~r~~~~lF~~~~~-----------~~v~~S~~EIyne~v~DLL~~~ 151 (345)
T cd01368 83 DLLKGKNSLLFTYGVTNSGKTYTMQGSPGDGGILPRSLDVIFNSIGG-----------YSVFVSYVEIYNNYIYDLLEDS 151 (345)
T ss_pred HHhCCCceEEEEeCCCCCCCeEEecCCCCCCchHHHHHHHHHHHHHh-----------eeEEEEEEEEeCCEeEeCCCCc
Confidence 48999999999999999999999999999999999999999996543 8999999999999999999886
Q ss_pred CC----CCcceEEEcCCCCceeccCeEEEecCHHHHHHHHHhhhccccceeccCCCCCCCceeEEEEEEEEEeeccCCCc
Q psy12523 203 AN----KQSLKVREHNVLGPYVDGLSQLAVTSFQEIDSLMAEGNKSRTVAATNMNSESSRSHAVFSVVLTQTLVDTKSGV 278 (544)
Q Consensus 203 ~~----~~~l~i~e~~~~~~~v~~ls~~~v~s~~e~~~ll~~g~~~R~~~~t~~n~~SSRSH~i~~i~v~~~~~~~~~~~ 278 (544)
.. ..++.+++|+.++++|+|++++.|.|++|+.++|..|.++|..++|.+|.+|||||+||+|.+.+........
T Consensus 152 ~~~~~~~~~l~i~ed~~~~~~i~gl~~~~v~s~~e~~~~l~~g~~~R~~~~t~~N~~SSRSH~i~~i~v~~~~~~~~~~- 230 (345)
T cd01368 152 PSSTKKRQSLRLREDHNGNMYVAGLTEVEVSSTEEAREVFKRGQKNRRVAGTKLNRESSRSHSVFTIKLVQAPGDSDGD- 230 (345)
T ss_pred cccccCCCceEEEECCCCCEEecCCEEEEeCCHHHHHHHHHHhhccceeccccCcCCCCCceEEEEEEEEEeccCcccc-
Confidence 43 4679999999999999999999999999999999999999999999999989898888888877552211000
Q ss_pred ccceeeeeeeeccchHHHHHHHHhhhcccccccccCCCCCCCceeEEEEEEEEEeecCCCCcccceeeeeeeeeccCCcc
Q psy12523 279 EGEKVARLSLVDLASEEIDSLMAEGNKSRTVAATNMNSESSRSHAVFSVVLTQTLVDTKSGVEGEKVARLSLVDLAGSER 358 (544)
Q Consensus 279 ~~~~v~~~s~v~~~~ee~~~ll~~g~~~R~~~sT~~N~~SSRSH~Ifti~i~q~~~~~~~~~~~~~~s~l~~vDLagse~ 358 (544)
..........++|+||||||+|+
T Consensus 231 ---------------------------------------------------------~~~~~~~~~~s~l~~VDLAGsEr 253 (345)
T cd01368 231 ---------------------------------------------------------VDQDKDQITVSQLSLVDLAGSER 253 (345)
T ss_pred ---------------------------------------------------------cccCCCceEEEEEEEEecccccc
Confidence 00012334678999999999999
Q ss_pred hhccCcchhhhhccccccchhhhHHHHHHHhhcccCCCCCCCCccccchhhHHHHhhhhcCCCCceeeeeeeCCcccchh
Q psy12523 359 AVKTGAVGERLKEGSNINKSLTTLGLVISKLADSTSSSKNKDKFVPYRDSVLTWLLKDNLGGNSKTVMVATVSPAADNYE 438 (544)
Q Consensus 359 ~~~~~~~~~~~~e~~~in~sL~~l~~vi~~La~~~~~~~~~~~~vp~r~SkLT~lL~~~lggns~~~~i~~vsp~~~~~~ 438 (544)
..+.++.+.+++|+..||+||.+|+.||.+|+..+... .+..|+|||+|+||++|+
T Consensus 254 ~~~~~~~g~~~~E~~~IN~SL~aL~~vi~aL~~~~~~~-~~~~~iPyR~SkLT~lL~----------------------- 309 (345)
T cd01368 254 TSRTQNTGERLKEAGNINTSLMTLGKCIEVLRENQLSG-STNKMVPYRDSKLTHLFQ----------------------- 309 (345)
T ss_pred cccccccchhhhhhhhhhHHHHHHHHHHHHHHhhhccc-CCCCcCCCcCCHHHHHHH-----------------------
Confidence 99999999999999999999999999999998754311 144566666666666554
Q ss_pred hhhccccccccccccccccccccCCCcceEEEEecCCccccHHHHHHhhcchhHHh
Q psy12523 439 ETLSTLRYADRAKRIVNHAVDNLGGNSKTVMVATVSPAADNYEETLSTLRYADRAK 494 (544)
Q Consensus 439 etl~tL~~~~R~sklt~~l~~slggnskt~mi~~iSp~~~~~~eTl~TL~~a~rak 494 (544)
++|||||+|+||+||||+..+++||++||+||.||+
T Consensus 310 --------------------~~l~g~s~t~~I~~vsp~~~~~~eTl~tL~fa~~a~ 345 (345)
T cd01368 310 --------------------NYFDGEGKARMIVNVNPCASDYDETLHVMKFSAIAQ 345 (345)
T ss_pred --------------------HhcCCCCeEEEEEEeCCchhhHHHHHHHHHHHHhcC
Confidence 566677788888888888899999999999999985
No 11
>cd01365 KISc_KIF1A_KIF1B Kinesin motor domain, KIF1_like proteins. KIF1A (Unc104) transports synaptic vesicles to the nerve terminal, KIF1B has been implicated in transport of mitochondria. Both proteins are expressed in neurons. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In most kinesins, the motor domain is found at the N-terminus (N-type). N-type kinesins are (+) end-directed motors, i.e. they transport cargo towards the (+) end of the microtubule. In contrast to the majority of dimeric kinesins, most KIF1A/Unc104 kinesins are monomeric motors. A lysine-rich loop in KIF1A binds to the negatively charged C-terminus of tubulin and compensates for the lack of a second motor domain, allowing KIF1A to move processively.
Probab=100.00 E-value=4.3e-53 Score=438.37 Aligned_cols=273 Identities=56% Similarity=0.791 Sum_probs=229.8
Q ss_pred hhhcccccceeeeecccccccccccccCCCCCchhHHHHHHhhhccccccCCCCCcccceeEEEEEEEeecceeeecCCC
Q psy12523 122 QEALESMGISVQASGIKVEKNKYYLVNLNADPSLNELLVYYLKDCTLIGSSDKNDIQLSGNLKINFGLFFCFQVHDLLDP 201 (544)
Q Consensus 122 ~~~l~g~~~~i~a~g~~~sgkt~Tl~G~~~~~Gli~~~~~~Lf~~~~~~~~~~~~~~~~~~v~~S~~Evy~e~v~DLL~~ 201 (544)
+.++.|++.+|+|||++|+||||||+|+..++||+|+++++||+.+..... ....|.|++||+|||+|+|+|||++
T Consensus 82 ~~~l~G~n~~i~ayGqtGSGKT~Tm~G~~~~~Gli~r~~~~Lf~~~~~~~~----~~~~~~v~~S~~EIy~e~v~DLL~~ 157 (356)
T cd01365 82 DHAFEGYNVCLFAYGQTGSGKSYTMMGYKEEKGIIPRLCEELFQRIESKKE----QNLSYEVEVSYMEIYNEKVRDLLNP 157 (356)
T ss_pred HHHhCCCceEEEEecCCCCCCeEEecCCCCCCchHHHHHHHHHHHHhhccc----cCceEEEEEEEEEEECCeeeeCCCC
Confidence 348999999999999999999999999999999999999999997654322 2568999999999999999999998
Q ss_pred CC-CCCcceEEEcCCCCceeccCeEEEecCHHHHHHHHHhhhccccceeccCCCCCCCceeEEEEEEEEEeeccCCCccc
Q psy12523 202 KA-NKQSLKVREHNVLGPYVDGLSQLAVTSFQEIDSLMAEGNKSRTVAATNMNSESSRSHAVFSVVLTQTLVDTKSGVEG 280 (544)
Q Consensus 202 ~~-~~~~l~i~e~~~~~~~v~~ls~~~v~s~~e~~~ll~~g~~~R~~~~t~~n~~SSRSH~i~~i~v~~~~~~~~~~~~~ 280 (544)
.. ....+++++++.++++++|++++.|+|++|+..++..|.++|..++|.+|..|||||+||+|.+.+...
T Consensus 158 ~~~~~~~l~i~~~~~~g~~v~gl~~~~v~s~~e~~~~l~~g~~~R~~~~t~~n~~SSRSH~i~~l~v~~~~~-------- 229 (356)
T cd01365 158 KKKNKGNLKVREHPVLGPYVEDLSKVAVTSYEDIQNLLEEGNKSRTTASTNMNDTSSRSHAVFTIVLTQKKL-------- 229 (356)
T ss_pred CccCCcCceEEECCCCCEEeCCCEEEEeCCHHHHHHHHHHHHhcccccCCCCCCCcCCceEEEEEEEEEEec--------
Confidence 75 567899999999999999999999999999999999999999888888888777777777776654422
Q ss_pred ceeeeeeeeccchHHHHHHHHhhhcccccccccCCCCCCCceeEEEEEEEEEeecCCCCcccceeeeeeeeeccCCcchh
Q psy12523 281 EKVARLSLVDLASEEIDSLMAEGNKSRTVAATNMNSESSRSHAVFSVVLTQTLVDTKSGVEGEKVARLSLVDLAGSERAV 360 (544)
Q Consensus 281 ~~v~~~s~v~~~~ee~~~ll~~g~~~R~~~sT~~N~~SSRSH~Ifti~i~q~~~~~~~~~~~~~~s~l~~vDLagse~~~ 360 (544)
...........++|+||||||+|+..
T Consensus 230 ------------------------------------------------------~~~~~~~~~~~s~l~~VDLAGsEr~~ 255 (356)
T cd01365 230 ------------------------------------------------------DKETDLTTEKVSKISLVDLAGSERAS 255 (356)
T ss_pred ------------------------------------------------------ccCCCCCceEEEEEEeeecccccccc
Confidence 11122334568899999999999999
Q ss_pred ccCcchhhhhccccccchhhhHHHHHHHhhcccCCC-CCCCCccccchhhHHHHhhhhcCCCCceeeeeeeCCcccchhh
Q psy12523 361 KTGAVGERLKEGSNINKSLTTLGLVISKLADSTSSS-KNKDKFVPYRDSVLTWLLKDNLGGNSKTVMVATVSPAADNYEE 439 (544)
Q Consensus 361 ~~~~~~~~~~e~~~in~sL~~l~~vi~~La~~~~~~-~~~~~~vp~r~SkLT~lL~~~lggns~~~~i~~vsp~~~~~~e 439 (544)
..+..+.+.+|+..||+||.+|+.|+.+|+...... ..+..++|||+|+||++|
T Consensus 256 ~~~~~~~~~~E~~~IN~SL~aL~~vi~~l~~~~~~~~~~~~~~ipyR~SkLT~lL------------------------- 310 (356)
T cd01365 256 STGAEGDRLKEGSNINKSLTTLGKVISALADNSSAKSKKKSSFIPYRDSVLTWLL------------------------- 310 (356)
T ss_pred cccccchhhHHHHHHhHHHHHHHHHHHHHHhcccccccCCCCcCCCcCcHHHHHH-------------------------
Confidence 999999999999999999999999999998754321 123456666666666555
Q ss_pred hhccccccccccccccccccccCCCcceEEEEecCCccccHHHHHHhhcchhHHhhhhccceec
Q psy12523 440 TLSTLRYADRAKRIVNHAVDNLGGNSKTVMVATVSPAADNYEETLSTLRYADRAKRIVNHAVVN 503 (544)
Q Consensus 440 tl~tL~~~~R~sklt~~l~~slggnskt~mi~~iSp~~~~~~eTl~TL~~a~rak~i~n~~~~n 503 (544)
+++||||++|+||+||||+..+++||++||+||+|+++|+|.|++|
T Consensus 311 ------------------~~~lgg~s~t~~I~~vsp~~~~~~eTl~tL~fa~~~~~i~~~~~~~ 356 (356)
T cd01365 311 ------------------KENLGGNSKTAMIATISPADINYEETLSTLRYADRAKKIVNVAVVN 356 (356)
T ss_pred ------------------HHhcCCCceEEEEEEeCCCcccHHHHHHHHHHHHHHhhccCccccC
Confidence 4566677788888888888899999999999999999999999876
No 12
>cd01364 KISc_BimC_Eg5 Kinesin motor domain, BimC/Eg5 spindle pole proteins, participate in spindle assembly and chromosome segregation during cell division. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In most kinesins, the motor domain is found at the N-terminus (N-type), N-type kinesins are (+) end-directed motors, i.e. they transport cargo towards the (+) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain, which repositions the other head domain through the coiled-coil d
Probab=100.00 E-value=2.5e-51 Score=425.07 Aligned_cols=264 Identities=37% Similarity=0.504 Sum_probs=225.2
Q ss_pred hhhcccccceeeeecccccccccccccCCC-----------CCchhHHHHHHhhhccccccCCCCCcccceeEEEEEEEe
Q psy12523 122 QEALESMGISVQASGIKVEKNKYYLVNLNA-----------DPSLNELLVYYLKDCTLIGSSDKNDIQLSGNLKINFGLF 190 (544)
Q Consensus 122 ~~~l~g~~~~i~a~g~~~sgkt~Tl~G~~~-----------~~Gli~~~~~~Lf~~~~~~~~~~~~~~~~~~v~~S~~Ev 190 (544)
+.++.|++.+|+|||++|+||||||+|+.. .+||+||++.+||+.+... ...|.|++||+||
T Consensus 75 ~~~~~G~n~~i~ayG~tgSGKTyTl~G~~~~~~~~~~~~~~~~Glipr~~~~Lf~~~~~~-------~~~~~v~~S~~EI 147 (352)
T cd01364 75 DEVLMGYNCTIFAYGQTGTGKTYTMEGDRTDNKGSTWELSPHAGIIPRALYQLFEKLESQ-------NTEYSVKVSYLEL 147 (352)
T ss_pred HHHhCCCeEEEEECCCCCCCCcEEecCCCcccccccccccccCCchHHHHHHHHHHHHhc-------cceeEEEEEEEEe
Confidence 348999999999999999999999999743 3899999999999976542 4578999999999
Q ss_pred ecceeeecCCCCC-CCCcceEEEc--CCCCceeccCeEEEecCHHHHHHHHHhhhccccceeccCCCCCCCceeEEEEEE
Q psy12523 191 FCFQVHDLLDPKA-NKQSLKVREH--NVLGPYVDGLSQLAVTSFQEIDSLMAEGNKSRTVAATNMNSESSRSHAVFSVVL 267 (544)
Q Consensus 191 y~e~v~DLL~~~~-~~~~l~i~e~--~~~~~~v~~ls~~~v~s~~e~~~ll~~g~~~R~~~~t~~n~~SSRSH~i~~i~v 267 (544)
|+|+|+|||++.. ..++++++++ ..++++++|++++.|.|++|+.++++.|.++|..++|.+|..|||||+||+|.+
T Consensus 148 y~e~v~DLL~~~~~~~~~l~i~e~~~~~~g~~v~gl~~~~v~s~~e~~~~l~~g~~~R~~~~t~~n~~sSRSH~i~~i~i 227 (352)
T cd01364 148 YNEELFDLLSSESDLNKPLRIFDDTNNKGGVVIQGLEEITVNNANEGLKLLEKGSAKRKTAATLMNDQSSRSHSIFSITI 227 (352)
T ss_pred eCCeeeeCCCCccccCccceEEeccCcCCCEEeCCcEEEEeCCHHHHHHHHHHHhhhcccccCcCCCCCCCCceEEEEEE
Confidence 9999999999874 4678999999 589999999999999999999999999999999998888888888888888777
Q ss_pred EEEeeccCCCcccceeeeeeeeccchHHHHHHHHhhhcccccccccCCCCCCCceeEEEEEEEEEeecCCCCcccceeee
Q psy12523 268 TQTLVDTKSGVEGEKVARLSLVDLASEEIDSLMAEGNKSRTVAATNMNSESSRSHAVFSVVLTQTLVDTKSGVEGEKVAR 347 (544)
Q Consensus 268 ~~~~~~~~~~~~~~~v~~~s~v~~~~ee~~~ll~~g~~~R~~~sT~~N~~SSRSH~Ifti~i~q~~~~~~~~~~~~~~s~ 347 (544)
.+.... ..+......++
T Consensus 228 ~~~~~~---------------------------------------------------------------~~~~~~~~~s~ 244 (352)
T cd01364 228 HIKETT---------------------------------------------------------------ISGEELVKIGK 244 (352)
T ss_pred EEeccC---------------------------------------------------------------CCCCccEEEEE
Confidence 643110 11122335689
Q ss_pred eeeeeccCCcchhccCcchhhhhccccccchhhhHHHHHHHhhcccCCCCCCCCccccchhhHHHHhhhhcCCCCceeee
Q psy12523 348 LSLVDLAGSERAVKTGAVGERLKEGSNINKSLTTLGLVISKLADSTSSSKNKDKFVPYRDSVLTWLLKDNLGGNSKTVMV 427 (544)
Q Consensus 348 l~~vDLagse~~~~~~~~~~~~~e~~~in~sL~~l~~vi~~La~~~~~~~~~~~~vp~r~SkLT~lL~~~lggns~~~~i 427 (544)
|+||||||+|+..+.++.+.+.+|+..||+||.+|+.||.+|+.. ..++|||+|+||++|+
T Consensus 245 l~~VDLAGsE~~~~~~~~~~~~~e~~~iN~SL~~L~~vi~al~~~-------~~~vpyR~S~LT~lL~------------ 305 (352)
T cd01364 245 LNLVDLAGSENIGRSGAENKRAREAGNINQSLLTLGRVINALVEK-------SPHIPYRESKLTRLLQ------------ 305 (352)
T ss_pred EEEEECCCccccccccCcchhhHHHhhhhHHHHHHHHHHHHHHcC-------CCCCCCcccHHHHHHH------------
Confidence 999999999999999999999999999999999999999999753 3477777777777665
Q ss_pred eeeCCcccchhhhhccccccccccccccccccccCCCcceEEEEecCCccccHHHHHHhhcchhHHhhhhccceecCC
Q psy12523 428 ATVSPAADNYEETLSTLRYADRAKRIVNHAVDNLGGNSKTVMVATVSPAADNYEETLSTLRYADRAKRIVNHAVVNED 505 (544)
Q Consensus 428 ~~vsp~~~~~~etl~tL~~~~R~sklt~~l~~slggnskt~mi~~iSp~~~~~~eTl~TL~~a~rak~i~n~~~~n~~ 505 (544)
++|||||+|+||+||||+..+++||++||+||.||++|+|+|.+|.+
T Consensus 306 -------------------------------~~Lgg~s~t~~I~~vsp~~~~~~eTl~TL~~a~~~~~i~n~P~~n~~ 352 (352)
T cd01364 306 -------------------------------DSLGGRTKTSIIATISPASINLEETLSTLEYAHRAKNIKNKPEVNQK 352 (352)
T ss_pred -------------------------------HhcCCCceEEEEEEeCCCcccHHHHHHHHHHHHHHhhccCccccCCC
Confidence 45556777777888888889999999999999999999999999863
No 13
>cd01367 KISc_KIF2_like Kinesin motor domain, KIF2-like group. KIF2 is a protein expressed in neurons, which has been associated with axonal transport and neuron development; alternative splice forms have been implicated in lysosomal translocation. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In this subgroup the motor domain is found in the middle (M-type) of the protein chain. M-type kinesins are (+) end-directed motors, i.e. they transport cargo towards the (+) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second (KIF2 may be slower). To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and lo
Probab=100.00 E-value=3.1e-51 Score=418.59 Aligned_cols=244 Identities=35% Similarity=0.453 Sum_probs=210.4
Q ss_pred hhhcccccceeeeecccccccccccccCCCCCchhHHHHHHhhhccccccCCCCCcccceeEEEEEEEeecceeeecCCC
Q psy12523 122 QEALESMGISVQASGIKVEKNKYYLVNLNADPSLNELLVYYLKDCTLIGSSDKNDIQLSGNLKINFGLFFCFQVHDLLDP 201 (544)
Q Consensus 122 ~~~l~g~~~~i~a~g~~~sgkt~Tl~G~~~~~Gli~~~~~~Lf~~~~~~~~~~~~~~~~~~v~~S~~Evy~e~v~DLL~~ 201 (544)
+.++.|++.+|+|||++|+||||||+|+..++||+|+++++||+.+.... ..|.|++||+|||+|+|+|||++
T Consensus 78 ~~~~~G~n~~i~ayGqtGSGKTyTm~G~~~~~Glipr~~~~lf~~~~~~~-------~~~~v~~S~~EIy~e~v~DLL~~ 150 (322)
T cd01367 78 PHVFEGGVATCFAYGQTGSGKTYTMLGDENQEGLYALAARDIFRLLAQPN-------DDLGVTVSFFEIYGGKLFDLLND 150 (322)
T ss_pred HHHhCCCceEEEeccCCCCCCceEecCcCCcCccHHHHHHHHHHHHhccc-------cccEEEEEEEeeecCchhhhccC
Confidence 33999999999999999999999999999999999999999999765432 57899999999999999999997
Q ss_pred CCCCCcceEEEcCCCCceeccCeEEEecCHHHHHHHHHhhhccccceeccCCCCCCCceeEEEEEEEEEeeccCCCcccc
Q psy12523 202 KANKQSLKVREHNVLGPYVDGLSQLAVTSFQEIDSLMAEGNKSRTVAATNMNSESSRSHAVFSVVLTQTLVDTKSGVEGE 281 (544)
Q Consensus 202 ~~~~~~l~i~e~~~~~~~v~~ls~~~v~s~~e~~~ll~~g~~~R~~~~t~~n~~SSRSH~i~~i~v~~~~~~~~~~~~~~ 281 (544)
.+.+++++++.++++++|+++++|.|++|+.++|+.|.++|..++|.+|..|||||+||+|.+.+.
T Consensus 151 ---~~~l~i~~~~~~~~~v~~l~~~~v~s~~e~~~~l~~g~~~R~~~~t~~n~~SSRSH~i~~i~v~~~----------- 216 (322)
T cd01367 151 ---RKRLSVLEDGKGNVQIVGLTEKPVTSVDELLELIESGNSLRTTGSTGANDQSSRSHAILQIILKNK----------- 216 (322)
T ss_pred ---ccceeEEEcCCCCEEeCCCEEEEeCCHHHHHHHHHHHhcccccccCcCCCCcccceEEEEEEEEEe-----------
Confidence 567999999999999999999999999999999999999998888888887777777777776533
Q ss_pred eeeeeeeeccchHHHHHHHHhhhcccccccccCCCCCCCceeEEEEEEEEEeecCCCCcccceeeeeeeeeccCCcchhc
Q psy12523 282 KVARLSLVDLASEEIDSLMAEGNKSRTVAATNMNSESSRSHAVFSVVLTQTLVDTKSGVEGEKVARLSLVDLAGSERAVK 361 (544)
Q Consensus 282 ~v~~~s~v~~~~ee~~~ll~~g~~~R~~~sT~~N~~SSRSH~Ifti~i~q~~~~~~~~~~~~~~s~l~~vDLagse~~~~ 361 (544)
.. ....++|+||||||+|+...
T Consensus 217 ---------------------------------------------------~~-------~~~~s~l~~vDLAGsE~~~~ 238 (322)
T cd01367 217 ---------------------------------------------------KL-------NKLLGKLSFIDLAGSERGAD 238 (322)
T ss_pred ---------------------------------------------------cC-------CeeEEEEEEeecCCcccccc
Confidence 10 23568999999999999877
Q ss_pred cC-cchhhhhccccccchhhhHHHHHHHhhcccCCCCCCCCccccchhhHHHHhhhhcCCCCceeeeeeeCCcccchhhh
Q psy12523 362 TG-AVGERLKEGSNINKSLTTLGLVISKLADSTSSSKNKDKFVPYRDSVLTWLLKDNLGGNSKTVMVATVSPAADNYEET 440 (544)
Q Consensus 362 ~~-~~~~~~~e~~~in~sL~~l~~vi~~La~~~~~~~~~~~~vp~r~SkLT~lL~~~lggns~~~~i~~vsp~~~~~~et 440 (544)
.. ..+.+..|+..||+||.+|+.|+.+|+.. ..++|||+|+||++|+
T Consensus 239 ~~~~~~~~~~e~~~IN~SL~~L~~vi~al~~~-------~~~iPyRdSkLT~lL~------------------------- 286 (322)
T cd01367 239 TSEHDRQTRKEGAEINKSLLALKECIRALASN-------KAHVPFRGSKLTQVLR------------------------- 286 (322)
T ss_pred ccccchhhHHhHhHHhHHHHHHHHHHHHHhcC-------CCcCCCccCHHHHHHH-------------------------
Confidence 54 46788999999999999999999999763 2577777777776665
Q ss_pred hccccccccccccccccccccCCCcceEEEEecCCccccHHHHHHhhcchhHHh
Q psy12523 441 LSTLRYADRAKRIVNHAVDNLGGNSKTVMVATVSPAADNYEETLSTLRYADRAK 494 (544)
Q Consensus 441 l~tL~~~~R~sklt~~l~~slggnskt~mi~~iSp~~~~~~eTl~TL~~a~rak 494 (544)
++|||||+|+||+||||+..+++||++||+||+|+|
T Consensus 287 ------------------~~L~g~~~t~~I~~vsp~~~~~~eTl~tL~fa~r~k 322 (322)
T cd01367 287 ------------------DSFIGNSKTVMIATISPSASSCEHTLNTLRYADRVK 322 (322)
T ss_pred ------------------HhhCCCCeEEEEEEeCCchhhHHHHHHHHHHHHhhC
Confidence 555667777888888888899999999999999986
No 14
>cd01376 KISc_KID_like Kinesin motor domain, KIF22/Kid-like subgroup. Members of this group might play a role in regulating chromosomal movement along microtubules in mitosis. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In most kinesins, the motor domain is found at the N-terminus (N-type). N-type kinesins are (+) end-directed motors, i.e. they transport cargo towards the (+) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain, which repositions the other head domain through
Probab=100.00 E-value=5.9e-51 Score=416.24 Aligned_cols=246 Identities=35% Similarity=0.473 Sum_probs=213.3
Q ss_pred hhhcccccceeeeecccccccccccccCCCCCchhHHHHHHhhhccccccCCCCCcccceeEEEEEEEeecceeeecCCC
Q psy12523 122 QEALESMGISVQASGIKVEKNKYYLVNLNADPSLNELLVYYLKDCTLIGSSDKNDIQLSGNLKINFGLFFCFQVHDLLDP 201 (544)
Q Consensus 122 ~~~l~g~~~~i~a~g~~~sgkt~Tl~G~~~~~Gli~~~~~~Lf~~~~~~~~~~~~~~~~~~v~~S~~Evy~e~v~DLL~~ 201 (544)
+.++.|++.||++||++|+||||||+|+..++||+|+++++||+.+... ...|.|++||+|||+|+|+|||++
T Consensus 74 ~~~~~G~n~~i~ayG~tgSGKTyTm~G~~~~~Glipr~~~~Lf~~~~~~-------~~~~~v~~S~~EIy~e~v~DLL~~ 146 (319)
T cd01376 74 PHLLSGQNATVFAYGSTGAGKTHTMLGDPNEPGLIPRTLSDLLRMGRKQ-------AWTGAFSMSYYEIYNEKVYDLLEP 146 (319)
T ss_pred HHHhCCCceEEEEECCCCCCCcEEEeCCcCccchHHHHHHHHHHHHhhc-------cccceEEEEEEEEECCEeeEccCC
Confidence 3499999999999999999999999999999999999999999854322 267899999999999999999998
Q ss_pred CCCCCcceEEEcCCCCceeccCeEEEecCHHHHHHHHHhhhccccceeccCCCCCCCceeEEEEEEEEEeeccCCCcccc
Q psy12523 202 KANKQSLKVREHNVLGPYVDGLSQLAVTSFQEIDSLMAEGNKSRTVAATNMNSESSRSHAVFSVVLTQTLVDTKSGVEGE 281 (544)
Q Consensus 202 ~~~~~~l~i~e~~~~~~~v~~ls~~~v~s~~e~~~ll~~g~~~R~~~~t~~n~~SSRSH~i~~i~v~~~~~~~~~~~~~~ 281 (544)
. ...+.+++++.+++++.|+++++|.+++|+..++..|.++|..++|.+|..|||||+||+|.|.+..
T Consensus 147 ~--~~~l~i~~~~~~~~~v~gl~~~~v~s~~e~~~~l~~~~~~R~~~~t~~n~~SSRSH~i~~i~v~~~~---------- 214 (319)
T cd01376 147 A--KKELPIREDKDGNILIVGLTSKPIKSMAEFEEAYIPASKNRTVAATKLNDNSSRSHAVLRIKVTQPA---------- 214 (319)
T ss_pred C--CCCceEEEcCCCCEEeeCCEEEEeCCHHHHHHHHHHHHhhhccccCcCCCccCCCeEEEEEEEEEEC----------
Confidence 6 5679999999999999999999999999999999999999998888888888787777777765431
Q ss_pred eeeeeeeeccchHHHHHHHHhhhcccccccccCCCCCCCceeEEEEEEEEEeecCCCCcccceeeeeeeeeccCCcchhc
Q psy12523 282 KVARLSLVDLASEEIDSLMAEGNKSRTVAATNMNSESSRSHAVFSVVLTQTLVDTKSGVEGEKVARLSLVDLAGSERAVK 361 (544)
Q Consensus 282 ~v~~~s~v~~~~ee~~~ll~~g~~~R~~~sT~~N~~SSRSH~Ifti~i~q~~~~~~~~~~~~~~s~l~~vDLagse~~~~ 361 (544)
......++|+||||||+|+...
T Consensus 215 ----------------------------------------------------------~~~~~~s~l~~VDLAGsE~~~~ 236 (319)
T cd01376 215 ----------------------------------------------------------SNIQLEGKLNLIDLAGSEDNRR 236 (319)
T ss_pred ----------------------------------------------------------CCceEEEEEEEEECCCCCcccc
Confidence 0114678999999999999999
Q ss_pred cCcchhhhhccccccchhhhHHHHHHHhhcccCCCCCCCCccccchhhHHHHhhhhcCCCCceeeeeeeCCcccchhhhh
Q psy12523 362 TGAVGERLKEGSNINKSLTTLGLVISKLADSTSSSKNKDKFVPYRDSVLTWLLKDNLGGNSKTVMVATVSPAADNYEETL 441 (544)
Q Consensus 362 ~~~~~~~~~e~~~in~sL~~l~~vi~~La~~~~~~~~~~~~vp~r~SkLT~lL~~~lggns~~~~i~~vsp~~~~~~etl 441 (544)
.+..+.+++|+..||+||.+|++|+.+|+.. ..++|||+|+||++|+
T Consensus 237 ~~~~g~~~~e~~~iN~Sl~~L~~vi~aL~~~-------~~~ipyr~S~LT~lL~-------------------------- 283 (319)
T cd01376 237 TGNEGIRLKESAAINSSLFVLSKVVDALNKG-------LPRIPYRESKLTRLLQ-------------------------- 283 (319)
T ss_pred cCCccchhhhhhhhhhhHHHHHHHHHHHhcC-------CCcCCCccCHHHHHHH--------------------------
Confidence 9999999999999999999999999999652 3577777777776665
Q ss_pred ccccccccccccccccccccCCCcceEEEEecCCccccHHHHHHhhcchhHHh
Q psy12523 442 STLRYADRAKRIVNHAVDNLGGNSKTVMVATVSPAADNYEETLSTLRYADRAK 494 (544)
Q Consensus 442 ~tL~~~~R~sklt~~l~~slggnskt~mi~~iSp~~~~~~eTl~TL~~a~rak 494 (544)
++|||||+|+||+||||+..+++||++||+||+|||
T Consensus 284 -----------------~~L~g~s~t~~i~~vsp~~~~~~eTl~TL~fa~r~~ 319 (319)
T cd01376 284 -----------------DSLGGGSRCIMVANIAPERSFYQDTLSTLNFASRSK 319 (319)
T ss_pred -----------------HhcCCCccEEEEEEeCCchhhHHHHHHHHHHHHhhC
Confidence 455667777888888888899999999999999986
No 15
>cd01371 KISc_KIF3 Kinesin motor domain, kinesins II or KIF3_like proteins. Subgroup of kinesins, which form heterotrimers composed of 2 kinesins and one non-motor accessory subunit. Kinesins II play important roles in ciliary transport, and have been implicated in neuronal transport, melanosome transport, the secretory pathway, and mitosis. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In this group the motor domain is found at the N-terminus (N-type). N-type kinesins are (+) end-directed motors, i.e. they transport cargo towards the (+) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain
Probab=100.00 E-value=4.2e-50 Score=412.37 Aligned_cols=256 Identities=42% Similarity=0.585 Sum_probs=217.4
Q ss_pred hhhcccccceeeeecccccccccccccCCC---CCchhHHHHHHhhhccccccCCCCCcccceeEEEEEEEeecceeeec
Q psy12523 122 QEALESMGISVQASGIKVEKNKYYLVNLNA---DPSLNELLVYYLKDCTLIGSSDKNDIQLSGNLKINFGLFFCFQVHDL 198 (544)
Q Consensus 122 ~~~l~g~~~~i~a~g~~~sgkt~Tl~G~~~---~~Gli~~~~~~Lf~~~~~~~~~~~~~~~~~~v~~S~~Evy~e~v~DL 198 (544)
+.++.|++.||+|||++|+||||||+|+.. ++||||+++++||+.+.... ...|.|.+||+|||+|+|+||
T Consensus 75 ~~~~~G~n~~i~ayG~tgSGKTyTm~G~~~~~~~~Glipr~~~~Lf~~~~~~~------~~~~~v~~S~~Eiy~e~v~DL 148 (333)
T cd01371 75 DSVLEGYNGTIFAYGQTGTGKTFTMEGVREPPELRGIIPNSFAHIFGHIAKAE------NVQFLVRVSYLEIYNEEVRDL 148 (333)
T ss_pred HHHhCCCceeEEecCCCCCCCcEeecCCCCcccccchHHHHHHHHHHHHhhcc------CccEEEEEEEEEeeCCeeeeC
Confidence 349999999999999999999999999887 79999999999999655432 267899999999999999999
Q ss_pred CCCCCCCCcceEEEcCCCCceeccCeEEEecCHHHHHHHHHhhhccccceeccCCCCCCCceeEEEEEEEEEeeccCCCc
Q psy12523 199 LDPKANKQSLKVREHNVLGPYVDGLSQLAVTSFQEIDSLMAEGNKSRTVAATNMNSESSRSHAVFSVVLTQTLVDTKSGV 278 (544)
Q Consensus 199 L~~~~~~~~l~i~e~~~~~~~v~~ls~~~v~s~~e~~~ll~~g~~~R~~~~t~~n~~SSRSH~i~~i~v~~~~~~~~~~~ 278 (544)
|++.. ...+.+++++.++++|+|++++.|.|++|+..++..|.++|..++|.+|..|||||+||+|.|++...
T Consensus 149 L~~~~-~~~l~i~~~~~~~~~v~~l~~~~v~s~~~~~~~l~~g~~~R~~~~t~~n~~ssRSH~i~~i~v~~~~~------ 221 (333)
T cd01371 149 LGKDQ-KKKLELKERPDRGVYVKDLSMFVVKNAEEMDKLMTLGNKNRSVGATNMNEDSSRSHSIFTITIECSEK------ 221 (333)
T ss_pred CCCCC-CCceeEEEcCCCCEEeCCCEEEEeCCHHHHHHHHHHHHhhCccccccccCCCCCCcEEEEEEEEEEec------
Confidence 99863 46899999999999999999999999999999999999999988888888777777777777654411
Q ss_pred ccceeeeeeeeccchHHHHHHHHhhhcccccccccCCCCCCCceeEEEEEEEEEeecCCCCcccceeeeeeeeeccCCcc
Q psy12523 279 EGEKVARLSLVDLASEEIDSLMAEGNKSRTVAATNMNSESSRSHAVFSVVLTQTLVDTKSGVEGEKVARLSLVDLAGSER 358 (544)
Q Consensus 279 ~~~~v~~~s~v~~~~ee~~~ll~~g~~~R~~~sT~~N~~SSRSH~Ifti~i~q~~~~~~~~~~~~~~s~l~~vDLagse~ 358 (544)
. ..+......++|+||||||+|+
T Consensus 222 --------------------------------------------------------~-~~~~~~~~~s~L~~VDLAGsEr 244 (333)
T cd01371 222 --------------------------------------------------------G-EDGENHIRVGKLNLVDLAGSER 244 (333)
T ss_pred --------------------------------------------------------c-CCCCCcEEEEEEEEEECCCCCc
Confidence 1 1122345678999999999999
Q ss_pred hhccCcchhhhhccccccchhhhHHHHHHHhhcccCCCCCCCCccccchhhHHHHhhhhcCCCCceeeeeeeCCcccchh
Q psy12523 359 AVKTGAVGERLKEGSNINKSLTTLGLVISKLADSTSSSKNKDKFVPYRDSVLTWLLKDNLGGNSKTVMVATVSPAADNYE 438 (544)
Q Consensus 359 ~~~~~~~~~~~~e~~~in~sL~~l~~vi~~La~~~~~~~~~~~~vp~r~SkLT~lL~~~lggns~~~~i~~vsp~~~~~~ 438 (544)
..+.+..+.++.|+..||+||.+|+.|+.+|+.. ...++|||+|+||++|++
T Consensus 245 ~~~~~~~~~~~~E~~~iN~sL~~L~~vi~al~~~------~~~~ipyR~SkLT~lL~~---------------------- 296 (333)
T cd01371 245 QSKTGATGDRLKEATKINLSLSALGNVISALVDG------KSTHIPYRDSKLTRLLQD---------------------- 296 (333)
T ss_pred ccccCCchhhhHhHhhhhhHHHHHHHHHHHHHhC------CCCcCCCccCHHHHHHHH----------------------
Confidence 9999899999999999999999999999999753 224777777777776665
Q ss_pred hhhccccccccccccccccccccCCCcceEEEEecCCccccHHHHHHhhcchhHHhhh
Q psy12523 439 ETLSTLRYADRAKRIVNHAVDNLGGNSKTVMVATVSPAADNYEETLSTLRYADRAKRI 496 (544)
Q Consensus 439 etl~tL~~~~R~sklt~~l~~slggnskt~mi~~iSp~~~~~~eTl~TL~~a~rak~i 496 (544)
+|||||+|+||+||+|...+++||++||+||+|||.|
T Consensus 297 ---------------------~l~g~s~t~~I~~vsP~~~~~~eTl~TL~fa~r~r~I 333 (333)
T cd01371 297 ---------------------SLGGNSKTVMCANIGPADYNYDETLSTLRYANRAKNI 333 (333)
T ss_pred ---------------------hcCCCceEEEEEEeCCccccHHHHHHHHHHHHHhhcC
Confidence 4556677777888888889999999999999999976
No 16
>cd01374 KISc_CENP_E Kinesin motor domain, CENP-E/KIP2-like subgroup, involved in chromosome movement and/or spindle elongation during mitosis. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In most kinesins, the motor domain is found at the N-terminus (N-type). N-type kinesins are (+) end-directed motors, i.e. they transport cargo towards the (+) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain, which repositions the other head domain through the coiled-coil domain close to
Probab=100.00 E-value=8.6e-50 Score=408.50 Aligned_cols=255 Identities=38% Similarity=0.548 Sum_probs=217.9
Q ss_pred hhhcccccceeeeecccccccccccccCCCCCchhHHHHHHhhhccccccCCCCCcccceeEEEEEEEeecceeeecCCC
Q psy12523 122 QEALESMGISVQASGIKVEKNKYYLVNLNADPSLNELLVYYLKDCTLIGSSDKNDIQLSGNLKINFGLFFCFQVHDLLDP 201 (544)
Q Consensus 122 ~~~l~g~~~~i~a~g~~~sgkt~Tl~G~~~~~Gli~~~~~~Lf~~~~~~~~~~~~~~~~~~v~~S~~Evy~e~v~DLL~~ 201 (544)
..++.|++.+|++||++|+||||||+|+..++||+|+++++||..+.... ...|.|++||+|||+|+|+|||+|
T Consensus 67 ~~~l~G~n~~i~ayG~tgSGKT~T~~G~~~~~Gli~r~~~~lf~~~~~~~------~~~~~v~~S~~Eiy~e~v~DLL~~ 140 (321)
T cd01374 67 RSALEGYNGTIFAYGQTSSGKTFTMSGDEQEPGIIPLAVRDIFQRIQDTP------DREFLLRVSYLEIYNEKIKDLLSP 140 (321)
T ss_pred HHHHCCCceeEEeecCCCCCCceeccCCCCCCchHHHHHHHHHHHHhccc------CceEEEEEEEEEEEcCEeEEccCC
Confidence 34899999999999999999999999999999999999999999765432 457899999999999999999998
Q ss_pred CCCCCcceEEEcCCCCceeccCeEEEecCHHHHHHHHHhhhccccceeccCCCCCCCceeEEEEEEEEEeeccCCCcccc
Q psy12523 202 KANKQSLKVREHNVLGPYVDGLSQLAVTSFQEIDSLMAEGNKSRTVAATNMNSESSRSHAVFSVVLTQTLVDTKSGVEGE 281 (544)
Q Consensus 202 ~~~~~~l~i~e~~~~~~~v~~ls~~~v~s~~e~~~ll~~g~~~R~~~~t~~n~~SSRSH~i~~i~v~~~~~~~~~~~~~~ 281 (544)
.. ..+++++++.++++++|++++.|.|++|+..+|+.|.++|..++|.+|..|||||+||+|+|.+.....
T Consensus 141 ~~--~~l~i~~~~~~~~~v~gl~~~~v~s~~e~~~~l~~~~~~R~~~~t~~n~~ssRSH~i~~i~v~~~~~~~------- 211 (321)
T cd01374 141 SP--QELRIREDPNKGVVVAGLTEEIVTSPEHLLQLIARGEKNRHVGETDFNERSSRSHTIFQLTIESRERGD------- 211 (321)
T ss_pred CC--CCceEEECCCCCEEeCCceEEEeCCHHHHHHHHHHHHhccccccCcCCCccccccEEEEEEEEEEecCC-------
Confidence 73 689999999999999999999999999999999999999998888888888888888877776542110
Q ss_pred eeeeeeeeccchHHHHHHHHhhhcccccccccCCCCCCCceeEEEEEEEEEeecCCCCcccceeeeeeeeeccCCcchhc
Q psy12523 282 KVARLSLVDLASEEIDSLMAEGNKSRTVAATNMNSESSRSHAVFSVVLTQTLVDTKSGVEGEKVARLSLVDLAGSERAVK 361 (544)
Q Consensus 282 ~v~~~s~v~~~~ee~~~ll~~g~~~R~~~sT~~N~~SSRSH~Ifti~i~q~~~~~~~~~~~~~~s~l~~vDLagse~~~~ 361 (544)
........++|+||||||+|+...
T Consensus 212 --------------------------------------------------------~~~~~~~~s~l~~vDLAGsE~~~~ 235 (321)
T cd01374 212 --------------------------------------------------------SESGTVRVSTLNLIDLAGSERASQ 235 (321)
T ss_pred --------------------------------------------------------CCCCcEEEEEEEEEECCCCCcccc
Confidence 022344678999999999999998
Q ss_pred cCcchhhhhccccccchhhhHHHHHHHhhcccCCCCCCCCccccchhhHHHHhhhhcCCCCceeeeeeeCCcccchhhhh
Q psy12523 362 TGAVGERLKEGSNINKSLTTLGLVISKLADSTSSSKNKDKFVPYRDSVLTWLLKDNLGGNSKTVMVATVSPAADNYEETL 441 (544)
Q Consensus 362 ~~~~~~~~~e~~~in~sL~~l~~vi~~La~~~~~~~~~~~~vp~r~SkLT~lL~~~lggns~~~~i~~vsp~~~~~~etl 441 (544)
.+ .+.+++|+..||+||.+|++|+.+|+..+. ..++|||+|+||++|++
T Consensus 236 ~~-~~~~~~e~~~iN~Sl~~L~~vi~al~~~~~-----~~~vpyR~SkLT~lL~~------------------------- 284 (321)
T cd01374 236 TG-AGERRKEGSFINKSLLTLGTVISKLSEGKN-----SGHIPYRDSKLTRILQP------------------------- 284 (321)
T ss_pred CC-CCccccccchhhhHHHHHHHHHHHHHhcCC-----CCcCCCcCCHHHHHHHH-------------------------
Confidence 88 889999999999999999999999986431 45777877777776654
Q ss_pred ccccccccccccccccccccCCCcceEEEEecCCccccHHHHHHhhcchhHHhhh
Q psy12523 442 STLRYADRAKRIVNHAVDNLGGNSKTVMVATVSPAADNYEETLSTLRYADRAKRI 496 (544)
Q Consensus 442 ~tL~~~~R~sklt~~l~~slggnskt~mi~~iSp~~~~~~eTl~TL~~a~rak~i 496 (544)
+|||||+|+||+||||...+++||++||+||+|+++|
T Consensus 285 ------------------~L~g~s~t~~i~~vsp~~~~~~eTl~TL~~a~r~~~i 321 (321)
T cd01374 285 ------------------SLSGNARTAIICTISPASSHVEETLNTLKFASRAKKV 321 (321)
T ss_pred ------------------hcCCCceEEEEEEeCCccccHHHHHHHHHHHHHHhcC
Confidence 4556677777777778889999999999999999875
No 17
>cd01375 KISc_KIF9_like Kinesin motor domain, KIF9-like subgroup; might play a role in cell shape remodeling. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In most kinesins, the motor domain is found at the N-terminus (N-type). N-type kinesins are (+) end-directed motors, i.e. they transport cargo towards the (+) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain, which repositions the other head domain through the coiled-coil domain close to a second tubulin dimer, about 80
Probab=100.00 E-value=6.5e-50 Score=410.85 Aligned_cols=253 Identities=35% Similarity=0.458 Sum_probs=215.2
Q ss_pred hhcccccceeeeecccccccccccccCC---CCCchhHHHHHHhhhccccccCCCCCcccceeEEEEEEEeecceeeecC
Q psy12523 123 EALESMGISVQASGIKVEKNKYYLVNLN---ADPSLNELLVYYLKDCTLIGSSDKNDIQLSGNLKINFGLFFCFQVHDLL 199 (544)
Q Consensus 123 ~~l~g~~~~i~a~g~~~sgkt~Tl~G~~---~~~Gli~~~~~~Lf~~~~~~~~~~~~~~~~~~v~~S~~Evy~e~v~DLL 199 (544)
.++.|++.+|+|||++|+||||||+|+. .++||+|+++++||+.+... ....|.|++||+|||+|+|+|||
T Consensus 75 ~~~~G~n~~i~ayG~tgSGKTyTm~G~~~~~~~~Glipr~~~~lf~~~~~~------~~~~~~v~~S~~Eiy~e~v~DLL 148 (334)
T cd01375 75 SALDGYNGTIFAYGQTGAGKTFTMTGGTESYKDRGLIPRALEQVFREVAMR------ATKTYTVHVSYLEIYNEQLYDLL 148 (334)
T ss_pred HHhCCCccceeeecCCCCCCeEEccCCCCcccCCchHHHHHHHHHHHHHhc------cCcceEEEEEEEEEECCEeecCC
Confidence 4999999999999999999999999976 46899999999999976542 24578999999999999999999
Q ss_pred CCCC----CCCcceEEEcCCCCceeccCeEEEecCHHHHHHHHHhhhccccceeccCCCCCCCceeEEEEEEEEEeeccC
Q psy12523 200 DPKA----NKQSLKVREHNVLGPYVDGLSQLAVTSFQEIDSLMAEGNKSRTVAATNMNSESSRSHAVFSVVLTQTLVDTK 275 (544)
Q Consensus 200 ~~~~----~~~~l~i~e~~~~~~~v~~ls~~~v~s~~e~~~ll~~g~~~R~~~~t~~n~~SSRSH~i~~i~v~~~~~~~~ 275 (544)
++.+ ..+.+.+++++.++++|+|++++.|.+++|++.++..|..+|..++|.+|..|||||+||+|+|.+...+
T Consensus 149 ~~~~~~~~~~~~l~i~e~~~~~~~v~gl~~~~v~s~~e~~~~~~~g~~~R~~~~t~~n~~sSRSH~i~~l~v~~~~~~-- 226 (334)
T cd01375 149 GDTPEALESLPAVTILEDSEQNIHVKGLSLHSATTEEEALNLLFLGETNRTIAETSMNQASSRSHCIFTIHLESRSRE-- 226 (334)
T ss_pred CCCccccccCCceEEEEcCCCCEEeCCcEEEEeCCHHHHHHHHHHHHhhcccccCcCcCCcCcCeEEEEEEEEEEecC--
Confidence 9884 3478999999999999999999999999999999999999999988888888888888887777644211
Q ss_pred CCcccceeeeeeeeccchHHHHHHHHhhhcccccccccCCCCCCCceeEEEEEEEEEeecCCCCcccceeeeeeeeeccC
Q psy12523 276 SGVEGEKVARLSLVDLASEEIDSLMAEGNKSRTVAATNMNSESSRSHAVFSVVLTQTLVDTKSGVEGEKVARLSLVDLAG 355 (544)
Q Consensus 276 ~~~~~~~v~~~s~v~~~~ee~~~ll~~g~~~R~~~sT~~N~~SSRSH~Ifti~i~q~~~~~~~~~~~~~~s~l~~vDLag 355 (544)
........++|+||||||
T Consensus 227 --------------------------------------------------------------~~~~~~~~s~l~~VDLAG 244 (334)
T cd01375 227 --------------------------------------------------------------AGSEVVRLSKLNLVDLAG 244 (334)
T ss_pred --------------------------------------------------------------CCCCceEEEEEEEEECCC
Confidence 122234678999999999
Q ss_pred CcchhccCcchhhhhccccccchhhhHHHHHHHhhcccCCCCCCCCccccchhhHHHHhhhhcCCCCceeeeeeeCCccc
Q psy12523 356 SERAVKTGAVGERLKEGSNINKSLTTLGLVISKLADSTSSSKNKDKFVPYRDSVLTWLLKDNLGGNSKTVMVATVSPAAD 435 (544)
Q Consensus 356 se~~~~~~~~~~~~~e~~~in~sL~~l~~vi~~La~~~~~~~~~~~~vp~r~SkLT~lL~~~lggns~~~~i~~vsp~~~ 435 (544)
+|+..+.+..+..+.|+..||+||.+|+.|+.+|+... ..++|||+|+||++|++
T Consensus 245 sEr~~~~~~~~~~~~e~~~iN~SL~~L~~vi~~l~~~~------~~~ipyRdSkLT~lL~d------------------- 299 (334)
T cd01375 245 SERVSKTGVSGQVLKEAKYINKSLSFLEQVINALSEKA------RTHVPYRNSKLTHVLRD------------------- 299 (334)
T ss_pred CCccccccCchhhhhhhhhhhhhHHHHHHHHHHHHhCC------CCCCCCcccHHHHHHHH-------------------
Confidence 99999999999999999999999999999999997632 35777777777776654
Q ss_pred chhhhhccccccccccccccccccccCCCcceEEEEecCCccccHHHHHHhhcchhHHh
Q psy12523 436 NYEETLSTLRYADRAKRIVNHAVDNLGGNSKTVMVATVSPAADNYEETLSTLRYADRAK 494 (544)
Q Consensus 436 ~~~etl~tL~~~~R~sklt~~l~~slggnskt~mi~~iSp~~~~~~eTl~TL~~a~rak 494 (544)
+|||||+|+||+||||+..+++||++||+||+|++
T Consensus 300 ------------------------~Lgg~~~t~~I~~vsp~~~~~~eTl~TL~fa~r~~ 334 (334)
T cd01375 300 ------------------------SLGGNCKTVMLATIWVEPSNLDETLSTLRFAQRVA 334 (334)
T ss_pred ------------------------hcCCCceEEEEEEeCCchhhHHHHHHHHHHHHhcC
Confidence 45566777777777778899999999999999974
No 18
>cd01369 KISc_KHC_KIF5 Kinesin motor domain, kinesin heavy chain (KHC) or KIF5-like subgroup. Members of this group have been associated with organelle transport. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In most kinesins, the motor domain is found at the N-terminus (N-type). N-type kinesins are (+) end-directed motors, i.e. they transport cargo towards the (+) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain, which repositions the other head domain through the coiled-c
Probab=100.00 E-value=8.7e-50 Score=409.36 Aligned_cols=253 Identities=40% Similarity=0.544 Sum_probs=218.6
Q ss_pred hhhcccccceeeeecccccccccccccCCC---CCchhHHHHHHhhhccccccCCCCCcccceeEEEEEEEeecceeeec
Q psy12523 122 QEALESMGISVQASGIKVEKNKYYLVNLNA---DPSLNELLVYYLKDCTLIGSSDKNDIQLSGNLKINFGLFFCFQVHDL 198 (544)
Q Consensus 122 ~~~l~g~~~~i~a~g~~~sgkt~Tl~G~~~---~~Gli~~~~~~Lf~~~~~~~~~~~~~~~~~~v~~S~~Evy~e~v~DL 198 (544)
+.++.|++.+|++||++|+||||||+|+.. ++||+|+++++||+.+... +....|.|++||+|||+|+|+||
T Consensus 70 ~~~~~G~n~~i~ayG~tgSGKT~Tm~G~~~~~~~~Giipr~~~~Lf~~~~~~-----~~~~~~~v~~S~~EIy~e~v~DL 144 (325)
T cd01369 70 DDVLNGYNGTIFAYGQTGSGKTYTMEGPPGDPELKGIIPRIVHDIFEHISSM-----DENLEFHVKVSYLEIYMEKIRDL 144 (325)
T ss_pred HHHHcCccceEEEeCCCCCCceEEecCCCCccccCChHHHHHHHHHHHHhhc-----cCCceEEEEEEEEEEECCChhhc
Confidence 348999999999999999999999999988 7999999999999976553 34567899999999999999999
Q ss_pred CCCCCCCCcceEEEcCCCCceeccCeEEEecCHHHHHHHHHhhhccccceeccCCCCCCCceeEEEEEEEEEeeccCCCc
Q psy12523 199 LDPKANKQSLKVREHNVLGPYVDGLSQLAVTSFQEIDSLMAEGNKSRTVAATNMNSESSRSHAVFSVVLTQTLVDTKSGV 278 (544)
Q Consensus 199 L~~~~~~~~l~i~e~~~~~~~v~~ls~~~v~s~~e~~~ll~~g~~~R~~~~t~~n~~SSRSH~i~~i~v~~~~~~~~~~~ 278 (544)
|++. +..+++++++.++++++|++++.|.|++|+..+|..|.++|..++|.+|..|||||+||+|.|.+...
T Consensus 145 L~~~--~~~l~i~~~~~~~~~v~gl~~~~v~s~~e~~~~i~~~~~~R~~~~t~~n~~ssRSH~i~~i~v~~~~~------ 216 (325)
T cd01369 145 LDVS--KDNLQVHEDKNRGVYVKGLTERFVSSPEEVLEVINEGKSNRAVASTNMNEESSRSHSIFLITLKQENV------ 216 (325)
T ss_pred ccCc--cCCceEEEcCCCCEEEcCCEEEEcCCHHHHHHHHHHHHhhcccccCcCCCccccccEEEEEEEEEEec------
Confidence 9986 56799999999999999999999999999999999999999999998888888888888877764411
Q ss_pred ccceeeeeeeeccchHHHHHHHHhhhcccccccccCCCCCCCceeEEEEEEEEEeecCCCCcccceeeeeeeeeccCCcc
Q psy12523 279 EGEKVARLSLVDLASEEIDSLMAEGNKSRTVAATNMNSESSRSHAVFSVVLTQTLVDTKSGVEGEKVARLSLVDLAGSER 358 (544)
Q Consensus 279 ~~~~v~~~s~v~~~~ee~~~ll~~g~~~R~~~sT~~N~~SSRSH~Ifti~i~q~~~~~~~~~~~~~~s~l~~vDLagse~ 358 (544)
.......++|+||||||+|+
T Consensus 217 ------------------------------------------------------------~~~~~~~s~l~~VDLAGsE~ 236 (325)
T cd01369 217 ------------------------------------------------------------ETGSKKRGKLFLVDLAGSEK 236 (325)
T ss_pred ------------------------------------------------------------CCCCEEEEEEEEEECCCCCc
Confidence 11234678999999999999
Q ss_pred hhccCcchhhhhccccccchhhhHHHHHHHhhcccCCCCCCCCccccchhhHHHHhhhhcCCCCceeeeeeeCCcccchh
Q psy12523 359 AVKTGAVGERLKEGSNINKSLTTLGLVISKLADSTSSSKNKDKFVPYRDSVLTWLLKDNLGGNSKTVMVATVSPAADNYE 438 (544)
Q Consensus 359 ~~~~~~~~~~~~e~~~in~sL~~l~~vi~~La~~~~~~~~~~~~vp~r~SkLT~lL~~~lggns~~~~i~~vsp~~~~~~ 438 (544)
..+.+..+.+++|+..||+||.+|+.|+.+|+... ..++|||+|+||++|+
T Consensus 237 ~~~~~~~~~~~~e~~~in~sl~~L~~vi~aL~~~~------~~~vpyR~S~LT~lL~----------------------- 287 (325)
T cd01369 237 VSKTGAEGQTLEEAKKINKSLSALGNVINALTDGK------STHIPYRDSKLTRILQ----------------------- 287 (325)
T ss_pred ccccCCcchhHHHHHHHhHHHHHHHHHHHHHHcCC------CCcCCCccCHHHHHHH-----------------------
Confidence 99999999999999999999999999999997632 2577777777777665
Q ss_pred hhhccccccccccccccccccccCCCcceEEEEecCCccccHHHHHHhhcchhHHhhh
Q psy12523 439 ETLSTLRYADRAKRIVNHAVDNLGGNSKTVMVATVSPAADNYEETLSTLRYADRAKRI 496 (544)
Q Consensus 439 etl~tL~~~~R~sklt~~l~~slggnskt~mi~~iSp~~~~~~eTl~TL~~a~rak~i 496 (544)
++|||||+|+||+||||+..+++||++||+||+|||+|
T Consensus 288 --------------------~~L~g~s~t~~I~~vsp~~~~~~eTl~TL~~a~r~~~i 325 (325)
T cd01369 288 --------------------DSLGGNSRTTLIICCSPSSYNESETLSTLRFGARAKTI 325 (325)
T ss_pred --------------------HhcCCCCeEEEEEEeCCccccHHHHHHHHHHHHHhhcC
Confidence 45556777777888888889999999999999999976
No 19
>cd01372 KISc_KIF4 Kinesin motor domain, KIF4-like subfamily. Members of this group seem to perform a variety of functions, and have been implicated in neuronal organelle transport and chromosome segregation during mitosis. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In most kinesins, the motor domain is found at the N-terminus (N-type). N-type kinesins are (+) end-directed motors, i.e. they transport cargo towards the (+) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain,
Probab=100.00 E-value=1.3e-49 Score=411.00 Aligned_cols=267 Identities=40% Similarity=0.530 Sum_probs=223.1
Q ss_pred hhcccccceeeeecccccccccccccCC------CCCchhHHHHHHhhhccccccCCCCCcccceeEEEEEEEeecceee
Q psy12523 123 EALESMGISVQASGIKVEKNKYYLVNLN------ADPSLNELLVYYLKDCTLIGSSDKNDIQLSGNLKINFGLFFCFQVH 196 (544)
Q Consensus 123 ~~l~g~~~~i~a~g~~~sgkt~Tl~G~~------~~~Gli~~~~~~Lf~~~~~~~~~~~~~~~~~~v~~S~~Evy~e~v~ 196 (544)
.++.|++.+|++||++|+||||||+|+. .++|||||++++||+.+..... ...|.|.+||+|||+|+|+
T Consensus 68 ~~~~G~n~~i~ayG~tgSGKT~Tm~G~~~~~~~~~~~Giipr~~~~LF~~~~~~~~-----~~~~~v~vS~~EIy~e~v~ 142 (341)
T cd01372 68 GLFEGYNATVLAYGQTGSGKTYTMGTAFTASEDEEEVGIIPRAIQHIFKKIDEKKD-----EPDFQLKVSFLELYNEEVR 142 (341)
T ss_pred HHhCCCccceeeecCCCCCCcEEecCCCccccccccCChHHHHHHHHHHHHHhccc-----cceEEEEEEEEEeECCeee
Confidence 3899999999999999999999999985 4599999999999997654322 4678999999999999999
Q ss_pred ecCCCCC-CCCcceEEEcCCCCceeccCeEEEecCHHHHHHHHHhhhccccceeccCCCCCCCceeEEEEEEEEEeeccC
Q psy12523 197 DLLDPKA-NKQSLKVREHNVLGPYVDGLSQLAVTSFQEIDSLMAEGNKSRTVAATNMNSESSRSHAVFSVVLTQTLVDTK 275 (544)
Q Consensus 197 DLL~~~~-~~~~l~i~e~~~~~~~v~~ls~~~v~s~~e~~~ll~~g~~~R~~~~t~~n~~SSRSH~i~~i~v~~~~~~~~ 275 (544)
|||++.. ....+.+++++.+++++.|++++.|.|++|+..+|..|.++|..++|.+|..|||||+||+|.|.+......
T Consensus 143 DLL~~~~~~~~~l~i~e~~~~~~~i~gl~~~~v~s~~e~~~~l~~g~~~R~~~~t~~n~~sSRsH~i~~i~v~~~~~~~~ 222 (341)
T cd01372 143 DLLSPSTSEKSPIQIREDSKGNIIIVGLTEVTVNSAQEVMSCLEQGSLSRTTASTAMNSQSSRSHAIFTITLEQTRKNGP 222 (341)
T ss_pred cCCCCcccCCCCceEEECCCCCEecCCCEEEEECCHHHHHHHHHHHHHhcccccccCCCccCcCcEEEEEEEEEEecCCc
Confidence 9999874 467899999999999999999999999999999999999999999999888888888888887776532100
Q ss_pred CCcccceeeeeeeeccchHHHHHHHHhhhcccccccccCCCCCCCceeEEEEEEEEEeecCCCCcccceeeeeeeeeccC
Q psy12523 276 SGVEGEKVARLSLVDLASEEIDSLMAEGNKSRTVAATNMNSESSRSHAVFSVVLTQTLVDTKSGVEGEKVARLSLVDLAG 355 (544)
Q Consensus 276 ~~~~~~~v~~~s~v~~~~ee~~~ll~~g~~~R~~~sT~~N~~SSRSH~Ifti~i~q~~~~~~~~~~~~~~s~l~~vDLag 355 (544)
... ...........++|+||||||
T Consensus 223 ~~~--------------------------------------------------------~~~~~~~~~~~s~l~~VDLAG 246 (341)
T cd01372 223 IAP--------------------------------------------------------MSGDDKNSTLTSKFHFVDLAG 246 (341)
T ss_pred ccc--------------------------------------------------------ccccCCCceeeEEEEEEECCC
Confidence 000 001122345678999999999
Q ss_pred CcchhccCcchhhhhccccccchhhhHHHHHHHhhcccCCCCCCCCccccchhhHHHHhhhhcCCCCceeeeeeeCCccc
Q psy12523 356 SERAVKTGAVGERLKEGSNINKSLTTLGLVISKLADSTSSSKNKDKFVPYRDSVLTWLLKDNLGGNSKTVMVATVSPAAD 435 (544)
Q Consensus 356 se~~~~~~~~~~~~~e~~~in~sL~~l~~vi~~La~~~~~~~~~~~~vp~r~SkLT~lL~~~lggns~~~~i~~vsp~~~ 435 (544)
+|+..+.+..+.+.+|+..||+||.+|++|+.+|+..++ ...++|||+|+||+||++
T Consensus 247 sE~~~~~~~~~~~~~e~~~in~sl~aL~~vi~al~~~~~----~~~~ipyR~S~LT~lL~~------------------- 303 (341)
T cd01372 247 SERLKKTGATGDRLKEGISINSGLLALGNVISALGDESK----KGSHVPYRDSKLTRLLQD------------------- 303 (341)
T ss_pred CcccccccCchhHhHHHHHHhHHHHHHHHHHHHHHhcCC----CCCCCCCcccHHHHHHHH-------------------
Confidence 999999999999999999999999999999999976542 235777777777766654
Q ss_pred chhhhhccccccccccccccccccccCCCcceEEEEecCCccccHHHHHHhhcchhHHhhhh
Q psy12523 436 NYEETLSTLRYADRAKRIVNHAVDNLGGNSKTVMVATVSPAADNYEETLSTLRYADRAKRIV 497 (544)
Q Consensus 436 ~~~etl~tL~~~~R~sklt~~l~~slggnskt~mi~~iSp~~~~~~eTl~TL~~a~rak~i~ 497 (544)
+||||++|+||+||||+..+++||++||+||+||++||
T Consensus 304 ------------------------~Lgg~s~t~~I~~vsp~~~~~~eTl~tL~~a~~~~~ik 341 (341)
T cd01372 304 ------------------------SLGGNSHTLMIACVSPADSNFEETLNTLKYANRARNIK 341 (341)
T ss_pred ------------------------hcCCCceEEEEEEeCCChhhHHHHHHHHHHHHHhccCC
Confidence 55667778888888888899999999999999999985
No 20
>cd01366 KISc_C_terminal Kinesin motor domain, KIFC2/KIFC3/ncd-like carboxy-terminal kinesins. Ncd is a spindle motor protein necessary for chromosome segregation in meiosis. KIFC2/KIFC3-like kinesins have been implicated in motility of the Golgi apparatus as well as dentritic and axonal transport in neurons. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In this subgroup the motor domain is found at the C-terminus (C-type). C-type kinesins are (-) end-directed motors, i.e. they transport cargo towards the (-) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for mi
Probab=100.00 E-value=7.9e-49 Score=403.17 Aligned_cols=257 Identities=38% Similarity=0.526 Sum_probs=221.4
Q ss_pred hhhcccccceeeeecccccccccccccCCCCCchhHHHHHHhhhccccccCCCCCcccceeEEEEEEEeecceeeecCCC
Q psy12523 122 QEALESMGISVQASGIKVEKNKYYLVNLNADPSLNELLVYYLKDCTLIGSSDKNDIQLSGNLKINFGLFFCFQVHDLLDP 201 (544)
Q Consensus 122 ~~~l~g~~~~i~a~g~~~sgkt~Tl~G~~~~~Gli~~~~~~Lf~~~~~~~~~~~~~~~~~~v~~S~~Evy~e~v~DLL~~ 201 (544)
+.++.|++.||++||++|+||||||+|+..++||+|+++++||+.+..... ....|.|.+||+|||+|+|+|||++
T Consensus 71 ~~~~~G~~~~i~ayG~tgSGKT~tl~G~~~~~Gli~r~~~~lf~~~~~~~~----~~~~~~v~~S~~EIy~e~v~DLL~~ 146 (329)
T cd01366 71 QSALDGYNVCIFAYGQTGSGKTYTMEGPPENPGIIPRALEQLFNTAEELKE----KGWSYTITASMLEIYNETIRDLLAT 146 (329)
T ss_pred HHHhCCCceEEEEeCCCCCCCcEEecCCCCCCCcHHHHHHHHHHHHHhhhc----cCceEEEEEEEEEEECCEeEECCCC
Confidence 349999999999999999999999999999999999999999997654332 2467999999999999999999998
Q ss_pred CC-CCCcceEEEcCCCCceeccCeEEEecCHHHHHHHHHhhhccccceeccCCCCCCCceeEEEEEEEEEeeccCCCccc
Q psy12523 202 KA-NKQSLKVREHNVLGPYVDGLSQLAVTSFQEIDSLMAEGNKSRTVAATNMNSESSRSHAVFSVVLTQTLVDTKSGVEG 280 (544)
Q Consensus 202 ~~-~~~~l~i~e~~~~~~~v~~ls~~~v~s~~e~~~ll~~g~~~R~~~~t~~n~~SSRSH~i~~i~v~~~~~~~~~~~~~ 280 (544)
.. .+.++++++++.+++++.|++++.|.|++|+..++..|.++|..++|.+|..|||||+||+|.|.+..
T Consensus 147 ~~~~~~~l~i~~~~~~~~~i~~l~~~~v~s~~e~~~~l~~~~~~R~~~~t~~n~~sSRsH~i~~i~v~~~~--------- 217 (329)
T cd01366 147 KPAPKKKLEIKHDSKGETYVTNLTEVPVSSPEEVTRLLNLGSKNRSVASTNMNEHSSRSHAVFQLKIRGTN--------- 217 (329)
T ss_pred CcCCCCceEEEECCCCCEEecCCEEEEeCCHHHHHHHHHHHHhhcccccccccCCCCCccEEEEEEEEEEc---------
Confidence 64 46789999999999999999999999999999999999999998888888877777777777765431
Q ss_pred ceeeeeeeeccchHHHHHHHHhhhcccccccccCCCCCCCceeEEEEEEEEEeecCCCCcccceeeeeeeeeccCCcchh
Q psy12523 281 EKVARLSLVDLASEEIDSLMAEGNKSRTVAATNMNSESSRSHAVFSVVLTQTLVDTKSGVEGEKVARLSLVDLAGSERAV 360 (544)
Q Consensus 281 ~~v~~~s~v~~~~ee~~~ll~~g~~~R~~~sT~~N~~SSRSH~Ifti~i~q~~~~~~~~~~~~~~s~l~~vDLagse~~~ 360 (544)
........++|+||||||+|+..
T Consensus 218 ---------------------------------------------------------~~~~~~~~s~l~~VDLaGsE~~~ 240 (329)
T cd01366 218 ---------------------------------------------------------LQTGEQTRGKLNLVDLAGSERLK 240 (329)
T ss_pred ---------------------------------------------------------CCCCcEEEEEEEEEECCCCcccc
Confidence 01223467899999999999999
Q ss_pred ccCcchhhhhccccccchhhhHHHHHHHhhcccCCCCCCCCccccchhhHHHHhhhhcCCCCceeeeeeeCCcccchhhh
Q psy12523 361 KTGAVGERLKEGSNINKSLTTLGLVISKLADSTSSSKNKDKFVPYRDSVLTWLLKDNLGGNSKTVMVATVSPAADNYEET 440 (544)
Q Consensus 361 ~~~~~~~~~~e~~~in~sL~~l~~vi~~La~~~~~~~~~~~~vp~r~SkLT~lL~~~lggns~~~~i~~vsp~~~~~~et 440 (544)
+.+..+.+.+|+..||+||.+|+.|+.+|+.. ..++|||+|+||++|+++
T Consensus 241 ~~~~~~~~~~e~~~in~Sl~~L~~vl~~l~~~-------~~~ipyr~S~LT~lL~~~----------------------- 290 (329)
T cd01366 241 KSGATGDRLKEAQAINKSLSALGDVISALRSK-------DSHVPYRNSKLTYLLQDS----------------------- 290 (329)
T ss_pred cccccchhhHhHhhhhhHHHHHHHHHHHHhcC-------CCcCCCcccHhHHHHHHh-----------------------
Confidence 99999999999999999999999999999753 457888888877776654
Q ss_pred hccccccccccccccccccccCCCcceEEEEecCCccccHHHHHHhhcchhHHhhhhc
Q psy12523 441 LSTLRYADRAKRIVNHAVDNLGGNSKTVMVATVSPAADNYEETLSTLRYADRAKRIVN 498 (544)
Q Consensus 441 l~tL~~~~R~sklt~~l~~slggnskt~mi~~iSp~~~~~~eTl~TL~~a~rak~i~n 498 (544)
||||++|+||+||||...+++||++||+||+|+++|++
T Consensus 291 --------------------l~g~~~t~~i~~vsp~~~~~~etl~tL~~a~~~~~i~~ 328 (329)
T cd01366 291 --------------------LGGNSKTLMFVNISPLESNLSETLCSLRFASRVRSVEL 328 (329)
T ss_pred --------------------cCCCceEEEEEEeCCchhhHHHHHHHHHHHHHhhcccC
Confidence 45666777777777777999999999999999999976
No 21
>PF00225 Kinesin: Kinesin motor domain; InterPro: IPR001752 Kinesin [, , ] is a microtubule-associated force-producing protein that may play a role in organelle transport. The kinesin motor activity is directed toward the microtubule's plus end. Kinesin is an oligomeric complex composed of two heavy chains and two light chains. The maintenance of the quaternary structure does not require interchain disulphide bonds. The heavy chain is composed of three structural domains: a large globular N-terminal domain which is responsible for the motor activity of kinesin (it is known to hydrolyse ATP, to bind and move on microtubules), a central alpha-helical coiled coil domain that mediates the heavy chain dimerisation; and a small globular C-terminal domain which interacts with other proteins (such as the kinesin light chains), vesicles and membranous organelles. A number of proteins have been recently found that contain a domain similar to that of the kinesin 'motor' domain [, ]: Drosophila melanogaster claret segregational protein (ncd). Ncd is required for normal chromosomal segregation in meiosis, in females, and in early mitotic divisions of the embryo. The ncd motor activity is directed toward the microtubule's minus end. Homo sapiens CENP-E []. CENP-E is a protein that associates with kinetochores during chromosome congression, relocates to the spindle midzone at anaphase, and is quantitatively discarded at the end of the cell division. CENP-E is probably an important motor molecule in chromosome movement and/or spindle elongation. H. sapiens mitotic kinesin-like protein-1 (MKLP-1), a motor protein whose activity is directed toward the microtubule's plus end. Saccharomyces cerevisiae KAR3 protein, which is essential for nuclear fusion during mating. KAR3 may mediate microtubule sliding during nuclear fusion and possibly mitosis. S. cerevisiae CIN8 and KIP1 proteins which are required for the assembly of the mitotic spindle. Both proteins seem to interact with spindle microtubules to produce an outwardly directed force acting upon the poles. Emericella nidulans (Aspergillus nidulans) bimC, which plays an important role in nuclear division. A. nidulans klpA. Caenorhabditis elegans unc-104, which may be required for the transport of substances needed for neuronal cell differentiation. C. elegans osm-3. Xenopus laevis Eg5, which may be involved in mitosis. Arabidopsis thaliana KatA, KatB and katC. Chlamydomonas reinhardtii FLA10/KHP1 and KLP1. Both proteins seem to play a role in the rotation or twisting of the microtubules of the flagella. C. elegans hypothetical protein T09A5.2. The kinesin motor domain is located in the N-terminal part of most of the above proteins, with the exception of KAR3, klpA, and ncd where it is located in the C-terminal section. The kinesin motor domain contains about 330 amino acids. An ATP-binding motif of type A is found near position 80 to 90, the C-terminal half of the domain is involved in microtubule-binding.; GO: 0003777 microtubule motor activity, 0005524 ATP binding, 0007018 microtubule-based movement; PDB: 3NWN_A 2Y5W_A 2Y65_C 3BFN_A 2WBE_C 2ZFL_A 2ZFI_A 1I6I_A 2ZFM_A 1IA0_K ....
Probab=100.00 E-value=2e-48 Score=401.79 Aligned_cols=262 Identities=42% Similarity=0.600 Sum_probs=217.6
Q ss_pred hhhcccccceeeeecccccccccccccC--CCCCchhHHHHHHhhhccccccCCCCCcccceeEEEEEEEeecceeeecC
Q psy12523 122 QEALESMGISVQASGIKVEKNKYYLVNL--NADPSLNELLVYYLKDCTLIGSSDKNDIQLSGNLKINFGLFFCFQVHDLL 199 (544)
Q Consensus 122 ~~~l~g~~~~i~a~g~~~sgkt~Tl~G~--~~~~Gli~~~~~~Lf~~~~~~~~~~~~~~~~~~v~~S~~Evy~e~v~DLL 199 (544)
+.++.|++.||++||++|+||||||+|+ ..++||+|+++++||+.+....... ...|.|++||+|||+|+|+|||
T Consensus 68 ~~~l~G~n~~i~ayG~tgSGKT~Tm~G~~~~~~~Gli~~~~~~lf~~~~~~~~~~---~~~~~v~vS~~EIy~e~v~DLL 144 (335)
T PF00225_consen 68 DSVLDGYNATIFAYGQTGSGKTYTMFGSNDPSEPGLIPRALRDLFSQIEERKEKS---GYEFSVSVSYLEIYNEKVYDLL 144 (335)
T ss_dssp HHHHTT-EEEEEEEESTTSSHHHHHTBSTSTTTBSHHHHHHHHHHHHHHHHTTTS---TEEEEEEEEEEEEETTEEEETT
T ss_pred HHhhcCCceEEEeeccccccccccccccccccccchhhhHHHHHhhhhccccccc---cccccccccchhhhhhhhhhhc
Confidence 3489999999999999999999999999 8889999999999999776543322 4679999999999999999999
Q ss_pred CCCC--CCCcceEEEcCCCC-ceeccCeEEEecCHHHHHHHHHhhhccccceeccCCCCCCCceeEEEEEEEEEeeccCC
Q psy12523 200 DPKA--NKQSLKVREHNVLG-PYVDGLSQLAVTSFQEIDSLMAEGNKSRTVAATNMNSESSRSHAVFSVVLTQTLVDTKS 276 (544)
Q Consensus 200 ~~~~--~~~~l~i~e~~~~~-~~v~~ls~~~v~s~~e~~~ll~~g~~~R~~~~t~~n~~SSRSH~i~~i~v~~~~~~~~~ 276 (544)
++.. ...++++++++..| ++++|++++.|.+++|+..+|..|.++|....+.+|..|||||+||+|.|.+...+
T Consensus 145 ~~~~~~~~~~l~i~~~~~~g~~~i~~l~~~~v~s~~~~~~~l~~~~~~R~~~~t~~n~~sSRSH~i~~i~v~~~~~~--- 221 (335)
T PF00225_consen 145 SPNNSKSRKPLKIREDSNKGSVYIKGLTEVEVKSAEEALQLLKKGQKNRRTASTKMNARSSRSHAIFTIHVEQKDRD--- 221 (335)
T ss_dssp STTSSSTTSEBEEEEETTTEEEEETTSEEEEESSHHHHHHHHHHHHHHHTCTSSSCTHHGGGSEEEEEEEEEEEETT---
T ss_pred Cccccccccccceeeccccccceeeccccccccccccccccccchhhcccccccccccccccccccccccccccccc---
Confidence 9984 45689999999976 99999999999999999999999999999888888887777777777776654221
Q ss_pred CcccceeeeeeeeccchHHHHHHHHhhhcccccccccCCCCCCCceeEEEEEEEEEeecCCCCcccceeeeeeeeeccCC
Q psy12523 277 GVEGEKVARLSLVDLASEEIDSLMAEGNKSRTVAATNMNSESSRSHAVFSVVLTQTLVDTKSGVEGEKVARLSLVDLAGS 356 (544)
Q Consensus 277 ~~~~~~v~~~s~v~~~~ee~~~ll~~g~~~R~~~sT~~N~~SSRSH~Ifti~i~q~~~~~~~~~~~~~~s~l~~vDLags 356 (544)
..........++|+||||||+
T Consensus 222 -----------------------------------------------------------~~~~~~~~~~s~l~~vDLaGs 242 (335)
T PF00225_consen 222 -----------------------------------------------------------PSDDEESVKHSRLTFVDLAGS 242 (335)
T ss_dssp -----------------------------------------------------------TTTEEEEEEEEEEEEEEEEES
T ss_pred -----------------------------------------------------------ccccccceeecceeeeecccc
Confidence 111111246789999999999
Q ss_pred cchhccCcc-hhhhhccccccchhhhHHHHHHHhhcccCCCCCCCCccccchhhHHHHhhhhcCCCCceeeeeeeCCccc
Q psy12523 357 ERAVKTGAV-GERLKEGSNINKSLTTLGLVISKLADSTSSSKNKDKFVPYRDSVLTWLLKDNLGGNSKTVMVATVSPAAD 435 (544)
Q Consensus 357 e~~~~~~~~-~~~~~e~~~in~sL~~l~~vi~~La~~~~~~~~~~~~vp~r~SkLT~lL~~~lggns~~~~i~~vsp~~~ 435 (544)
|+....... +.+.+|+..||+||.+|+.||.+|+.. ....++|||+|+||++|+
T Consensus 243 E~~~~~~~~~~~~~~e~~~in~Sl~~L~~vi~~L~~~-----~~~~~vpyr~SkLT~lL~-------------------- 297 (335)
T PF00225_consen 243 ERLKKSGASDGQRLKESSNINKSLSALGNVIRALAQG-----SKQSHVPYRDSKLTRLLK-------------------- 297 (335)
T ss_dssp TGGCGCSSSSHHHHHHHHHHHHHHHHHHHHHHHHHCT-----TSTSSSCGGGSHHHHHTG--------------------
T ss_pred cccccccccccccccccceecchhhhhhhhHhhhhcc-----ccchhhhhhcccccceec--------------------
Confidence 999988864 788999999999999999999999874 235677888777777665
Q ss_pred chhhhhccccccccccccccccccccCCCcceEEEEecCCccccHHHHHHhhcchhHHhhh
Q psy12523 436 NYEETLSTLRYADRAKRIVNHAVDNLGGNSKTVMVATVSPAADNYEETLSTLRYADRAKRI 496 (544)
Q Consensus 436 ~~~etl~tL~~~~R~sklt~~l~~slggnskt~mi~~iSp~~~~~~eTl~TL~~a~rak~i 496 (544)
++|||||+|+||+||||...+++||++||+||+|+++|
T Consensus 298 -----------------------d~l~g~s~t~~I~~vsp~~~~~~eTl~tL~fa~~~~~I 335 (335)
T PF00225_consen 298 -----------------------DSLGGNSKTILIVCVSPSSEDYEETLSTLRFASRAREI 335 (335)
T ss_dssp -----------------------GGTSSSSEEEEEEEE-SBGGGHHHHHHHHHHHHHHTTE
T ss_pred -----------------------ccccccccceeEEEcCCccccHHHHHHHHHHHHHHcCC
Confidence 45556667777777777779999999999999999986
No 22
>smart00129 KISc Kinesin motor, catalytic domain. ATPase. Microtubule-dependent molecular motors that play important roles in intracellular transport of organelles and in cell division.
Probab=100.00 E-value=1e-47 Score=396.20 Aligned_cols=263 Identities=46% Similarity=0.653 Sum_probs=226.6
Q ss_pred hhhcccccceeeeecccccccccccccCCCCCchhHHHHHHhhhccccccCCCCCcccceeEEEEEEEeecceeeecCCC
Q psy12523 122 QEALESMGISVQASGIKVEKNKYYLVNLNADPSLNELLVYYLKDCTLIGSSDKNDIQLSGNLKINFGLFFCFQVHDLLDP 201 (544)
Q Consensus 122 ~~~l~g~~~~i~a~g~~~sgkt~Tl~G~~~~~Gli~~~~~~Lf~~~~~~~~~~~~~~~~~~v~~S~~Evy~e~v~DLL~~ 201 (544)
+.++.|++.+|++||++|+||||||+|+..++||+|+++++||+.+..... ...|.|++||+|||+|+|+|||++
T Consensus 73 ~~~~~G~~~~i~~yG~tgSGKT~tl~G~~~~~Gli~~~~~~Lf~~~~~~~~-----~~~~~v~~S~~ei~~e~v~DLL~~ 147 (335)
T smart00129 73 DSVLEGYNATIFAYGQTGSGKTYTMSGTPDSPGIIPRALKDLFEKIDKLEE-----GWQFQVKVSYLEIYNEKIRDLLNP 147 (335)
T ss_pred HHHhcCCceeEEEeCCCCCCCceEecCCCCCCCHHHHHHHHHHHHhhhccc-----CceEEEEEEEEEEECCEEEECcCC
Confidence 348999999999999999999999999999999999999999997654322 457899999999999999999998
Q ss_pred CCCCCcceEEEcCCCCceeccCeEEEecCHHHHHHHHHhhhccccceeccCCCCCCCceeEEEEEEEEEeeccCCCcccc
Q psy12523 202 KANKQSLKVREHNVLGPYVDGLSQLAVTSFQEIDSLMAEGNKSRTVAATNMNSESSRSHAVFSVVLTQTLVDTKSGVEGE 281 (544)
Q Consensus 202 ~~~~~~l~i~e~~~~~~~v~~ls~~~v~s~~e~~~ll~~g~~~R~~~~t~~n~~SSRSH~i~~i~v~~~~~~~~~~~~~~ 281 (544)
. +..+++++++.+++++.|++++.|.|++|+.+++..|.++|...+|.+|..|||||+||+|.|.+...
T Consensus 148 ~--~~~l~i~~~~~~~~~i~~l~~~~v~s~~e~~~~l~~~~~~R~~~~t~~n~~ssRsH~i~~l~v~~~~~--------- 216 (335)
T smart00129 148 S--PKKLEIREDKKGGVYVKGLTEISVSSFEEVYNLLEKGNKNRTVAATKMNEESSRSHAVFTITVESKIK--------- 216 (335)
T ss_pred C--CCCcEEEECCCCCEEecCCEEEEeCCHHHHHHHHHHHHhccccccCCCCCCCCcceEEEEEEEEEEec---------
Confidence 6 67899999999999999999999999999999999999999888888888777777777776654311
Q ss_pred eeeeeeeeccchHHHHHHHHhhhcccccccccCCCCCCCceeEEEEEEEEEeecCCCCcccceeeeeeeeeccCCcchhc
Q psy12523 282 KVARLSLVDLASEEIDSLMAEGNKSRTVAATNMNSESSRSHAVFSVVLTQTLVDTKSGVEGEKVARLSLVDLAGSERAVK 361 (544)
Q Consensus 282 ~v~~~s~v~~~~ee~~~ll~~g~~~R~~~sT~~N~~SSRSH~Ifti~i~q~~~~~~~~~~~~~~s~l~~vDLagse~~~~ 361 (544)
+........++|+||||||+|+...
T Consensus 217 -------------------------------------------------------~~~~~~~~~s~l~~VDLaGse~~~~ 241 (335)
T smart00129 217 -------------------------------------------------------NSSSGSGKASKLNLVDLAGSERASK 241 (335)
T ss_pred -------------------------------------------------------CCCCCCEEEEEEEEEECCCCCcccc
Confidence 1223345789999999999999999
Q ss_pred cCcchhhhhccccccchhhhHHHHHHHhhcccCCCCCCCCccccchhhHHHHhhhhcCCCCceeeeeeeCCcccchhhhh
Q psy12523 362 TGAVGERLKEGSNINKSLTTLGLVISKLADSTSSSKNKDKFVPYRDSVLTWLLKDNLGGNSKTVMVATVSPAADNYEETL 441 (544)
Q Consensus 362 ~~~~~~~~~e~~~in~sL~~l~~vi~~La~~~~~~~~~~~~vp~r~SkLT~lL~~~lggns~~~~i~~vsp~~~~~~etl 441 (544)
.+..+.+++|+..||+||.+|+.|+.+|+.. .+..++|||+|+||++|+++|
T Consensus 242 ~~~~~~~~~e~~~in~sl~~L~~~l~~l~~~-----~~~~~ip~r~S~LT~lL~~~L----------------------- 293 (335)
T smart00129 242 TGAEGDRLKEAGNINKSLSALGNVINALADG-----QKSRHIPYRDSKLTRLLQDSL----------------------- 293 (335)
T ss_pred ccChhHHHHhhchhhhHHHHHHHHHHHHHhc-----CCCCCCCCcCcHhHHHHHHHc-----------------------
Confidence 9999999999999999999999999999763 235678888888887776554
Q ss_pred ccccccccccccccccccccCCCcceEEEEecCCccccHHHHHHhhcchhHHhhhhccceec
Q psy12523 442 STLRYADRAKRIVNHAVDNLGGNSKTVMVATVSPAADNYEETLSTLRYADRAKRIVNHAVVN 503 (544)
Q Consensus 442 ~tL~~~~R~sklt~~l~~slggnskt~mi~~iSp~~~~~~eTl~TL~~a~rak~i~n~~~~n 503 (544)
||+++|+||+||||...+++||++||+||.|+++|+|+|++|
T Consensus 294 --------------------~g~~~~~~i~~vsp~~~~~~eTl~tL~~a~~~~~i~~~p~~~ 335 (335)
T smart00129 294 --------------------GGNSKTLMIANISPSLSNLEETLSTLRFASRAKEIKNKAIVN 335 (335)
T ss_pred --------------------CCCCeEEEEEEcCCCccchHHHHHHHHHHHHHhhcccCCCcC
Confidence 556677777777777799999999999999999999999875
No 23
>KOG0239|consensus
Probab=100.00 E-value=4.4e-48 Score=420.72 Aligned_cols=261 Identities=35% Similarity=0.426 Sum_probs=225.3
Q ss_pred hhhcccccceeeeeccccccccccccc-CCCCCchhHHHHHHhhhccccccCCCCCcccceeEEEEEEEeecceeeecCC
Q psy12523 122 QEALESMGISVQASGIKVEKNKYYLVN-LNADPSLNELLVYYLKDCTLIGSSDKNDIQLSGNLKINFGLFFCFQVHDLLD 200 (544)
Q Consensus 122 ~~~l~g~~~~i~a~g~~~sgkt~Tl~G-~~~~~Gli~~~~~~Lf~~~~~~~~~~~~~~~~~~v~~S~~Evy~e~v~DLL~ 200 (544)
+.+++||+.||+||||+|+||||||.| ++.++|||||+++.||..+...+ ..|.|.+.++|+|||||.|+|||+
T Consensus 386 ~S~lDGYnVCIFAYGQTGSGKTyTM~G~~~~~~Giipral~~lF~~~~~~~-----~g~~y~~~~s~~EIYNe~i~DlL~ 460 (670)
T KOG0239|consen 386 QSALDGYNVCIFAYGQTGSGKTYTMSGPTPEDPGIIPRALEKLFRTITSLK-----SGWKYDKTVSMLEIYNEAIRDLLS 460 (670)
T ss_pred HHHhcCcceeEEEecccCCCccccccCCCcccCCccHHHHHHHHHHHHhhc-----cCceEEeeeehhHHHHHHHHHhcc
Confidence 459999999999999999999999999 68889999999999999655422 268999999999999999999999
Q ss_pred CCCCCCcceEEEcCCCCceeccCeEEEecCHHHHHHHHHhhhccccceeccCCCCCCCceeEEEEEEEEEeeccCCCccc
Q psy12523 201 PKANKQSLKVREHNVLGPYVDGLSQLAVTSFQEIDSLMAEGNKSRTVAATNMNSESSRSHAVFSVVLTQTLVDTKSGVEG 280 (544)
Q Consensus 201 ~~~~~~~l~i~e~~~~~~~v~~ls~~~v~s~~e~~~ll~~g~~~R~~~~t~~n~~SSRSH~i~~i~v~~~~~~~~~~~~~ 280 (544)
+......+.|+++.++..+|.+++.+.|.+.+|+..+++.|..+|++++|.+|.+|||||+||++.|.-.
T Consensus 461 ~~~~~~k~~I~~~~~~~~~V~~~t~~~V~s~~~v~~ll~~g~~nRsv~~T~~Ne~SSRSH~v~~v~v~g~---------- 530 (670)
T KOG0239|consen 461 DESYVGKLEIVDDAEGNLMVPLLTVIKVGSSEEVDILLEIGLSNRSVASTASNERSSRSHLVFRVRIRGI---------- 530 (670)
T ss_pred ccccccceeEEEcCCCceecccceEEecCCHHHHHHHHHHhhccccccccccchhhhccceEEEEEEecc----------
Confidence 8755678999999999999999999999999999999999999988888888887777777777766411
Q ss_pred ceeeeeeeeccchHHHHHHHHhhhcccccccccCCCCCCCceeEEEEEEEEEeecCCCCcccceeeeeeeeeccCCcchh
Q psy12523 281 EKVARLSLVDLASEEIDSLMAEGNKSRTVAATNMNSESSRSHAVFSVVLTQTLVDTKSGVEGEKVARLSLVDLAGSERAV 360 (544)
Q Consensus 281 ~~v~~~s~v~~~~ee~~~ll~~g~~~R~~~sT~~N~~SSRSH~Ifti~i~q~~~~~~~~~~~~~~s~l~~vDLagse~~~ 360 (544)
+........+.++|||||||||..
T Consensus 531 --------------------------------------------------------~~~t~~~~~g~l~LVDLAGSER~~ 554 (670)
T KOG0239|consen 531 --------------------------------------------------------NELTGIRVTGVLNLVDLAGSERVS 554 (670)
T ss_pred --------------------------------------------------------ccCcccccccceeEeecccCcccC
Confidence 122333456789999999999999
Q ss_pred ccCcchhhhhccccccchhhhHHHHHHHhhcccCCCCCCCCccccchhhHHHHhhhhcCCCCceeeeeeeCCcccchhhh
Q psy12523 361 KTGAVGERLKEGSNINKSLTTLGLVISKLADSTSSSKNKDKFVPYRDSVLTWLLKDNLGGNSKTVMVATVSPAADNYEET 440 (544)
Q Consensus 361 ~~~~~~~~~~e~~~in~sL~~l~~vi~~La~~~~~~~~~~~~vp~r~SkLT~lL~~~lggns~~~~i~~vsp~~~~~~et 440 (544)
+++..++|++|+.+||+||++|+.||.+|+. +..|+|||+||||++
T Consensus 555 ~s~~tG~RlkE~Q~INkSLS~LgdVi~AL~~-------k~~HiPyRNSKLT~l--------------------------- 600 (670)
T KOG0239|consen 555 KSGVTGERLKEAQNINKSLSALGDVISALAS-------KRSHIPYRNSKLTQL--------------------------- 600 (670)
T ss_pred cCCCchhhhHHHHHhchhhhhhHHHHHHHhh-------cCCCCcccccchHHH---------------------------
Confidence 9999999999999999999999999999976 344677777666655
Q ss_pred hccccccccccccccccccccCCCcceEEEEecCCccccHHHHHHhhcchhHHhhhhccceec
Q psy12523 441 LSTLRYADRAKRIVNHAVDNLGGNSKTVMVATVSPAADNYEETLSTLRYADRAKRIVNHAVVN 503 (544)
Q Consensus 441 l~tL~~~~R~sklt~~l~~slggnskt~mi~~iSp~~~~~~eTl~TL~~a~rak~i~n~~~~n 503 (544)
|+++|||++||+|+++|||...++.||+++|+||.|+..+...+...
T Consensus 601 ----------------Lq~sLGG~sKTLmfv~isP~~~~~~Etl~sL~FA~rv~~~~lG~a~~ 647 (670)
T KOG0239|consen 601 ----------------LQDSLGGDSKTLMFVNISPAAAALFETLCSLRFATRVRSVELGSARK 647 (670)
T ss_pred ----------------hHhhhCCccceeeEEEeCccHHHHhhhhhccchHHHhhceecccccc
Confidence 55777888999999999999999999999999999999998766543
No 24
>cd00106 KISc Kinesin motor domain. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In most kinesins, the motor domain is found at the N-terminus (N-type), in some its is found in the middle (M-type), or C-terminal (C-type). N-type and M-type kinesins are (+) end-directed motors, while C-type kinesins are (-) end-directed motors, i.e. they transport cargo towards the (-) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain, which repositions the other head domain through the coil
Probab=100.00 E-value=3.7e-46 Score=383.75 Aligned_cols=257 Identities=43% Similarity=0.580 Sum_probs=218.7
Q ss_pred hhhcccccceeeeecccccccccccccCCCCCchhHHHHHHhhhccccccCCCCCcccceeEEEEEEEeecceeeecCCC
Q psy12523 122 QEALESMGISVQASGIKVEKNKYYLVNLNADPSLNELLVYYLKDCTLIGSSDKNDIQLSGNLKINFGLFFCFQVHDLLDP 201 (544)
Q Consensus 122 ~~~l~g~~~~i~a~g~~~sgkt~Tl~G~~~~~Gli~~~~~~Lf~~~~~~~~~~~~~~~~~~v~~S~~Evy~e~v~DLL~~ 201 (544)
+.++.|++.+|++||++|+||||||+|+..++||+|+++++||+.+..... ....|.|.+||+|||+|+|+|||++
T Consensus 72 ~~~~~G~~~~i~~yG~tgSGKT~tl~G~~~~~Gli~~~~~~Lf~~~~~~~~----~~~~~~v~~S~~Ei~~e~v~DLL~~ 147 (328)
T cd00106 72 ESVLEGYNGTIFAYGQTGSGKTYTMFGSPKDPGIIPRALEDLFNLIDERKE----KNKSFSVSVSYLEIYNEKVYDLLSP 147 (328)
T ss_pred HHHhCCCceeEEEecCCCCCCeEEecCCCCCCchHHHHHHHHHHHHhhccc----cCceEEEEEEEEEEECCEeEECCCC
Confidence 348999999999999999999999999999999999999999997654332 3457899999999999999999999
Q ss_pred CCCCCcceEEEcCCCCceeccCeEEEecCHHHHHHHHHhhhccccceeccCCCCCCCceeEEEEEEEEEeeccCCCcccc
Q psy12523 202 KANKQSLKVREHNVLGPYVDGLSQLAVTSFQEIDSLMAEGNKSRTVAATNMNSESSRSHAVFSVVLTQTLVDTKSGVEGE 281 (544)
Q Consensus 202 ~~~~~~l~i~e~~~~~~~v~~ls~~~v~s~~e~~~ll~~g~~~R~~~~t~~n~~SSRSH~i~~i~v~~~~~~~~~~~~~~ 281 (544)
.....++.+++++.+++++.|++++.|+|++|+..++..|.++|..++|..|..|||||+||+|.|.+....
T Consensus 148 ~~~~~~l~i~~~~~~~~~v~~l~~~~v~s~~e~~~~l~~~~~~R~~~~t~~n~~ssRSH~i~~i~v~~~~~~-------- 219 (328)
T cd00106 148 EPPSKPLSLREDPKGGVYVKGLTEVEVGSAEDALSLLQKGLKNRTTASTAMNERSSRSHAIFTIHVEQRNTT-------- 219 (328)
T ss_pred CCCCCCcEEEEcCCCCEEEeCCEEEEeCCHHHHHHHHHHHHhhcCcccCcCCCCcCcCcEEEEEEEEEEecC--------
Confidence 766789999999999999999999999999999999999999999988888888888888887777654211
Q ss_pred eeeeeeeeccchHHHHHHHHhhhcccccccccCCCCCCCceeEEEEEEEEEeecCCCCcccceeeeeeeeeccCCcchhc
Q psy12523 282 KVARLSLVDLASEEIDSLMAEGNKSRTVAATNMNSESSRSHAVFSVVLTQTLVDTKSGVEGEKVARLSLVDLAGSERAVK 361 (544)
Q Consensus 282 ~v~~~s~v~~~~ee~~~ll~~g~~~R~~~sT~~N~~SSRSH~Ifti~i~q~~~~~~~~~~~~~~s~l~~vDLagse~~~~ 361 (544)
. .......++|+||||||+|+...
T Consensus 220 ------------------------------------------------------~--~~~~~~~s~l~~VDLaGse~~~~ 243 (328)
T cd00106 220 ------------------------------------------------------N--DGRSIKSSKLNLVDLAGSERAKK 243 (328)
T ss_pred ------------------------------------------------------C--CCccEEEEEEEEEECCCCCcccc
Confidence 0 01124678999999999999999
Q ss_pred cCcchhhhhccccccchhhhHHHHHHHhhcccCCCCCCCCccccchhhHHHHhhhhcCCCCceeeeeeeCCcccchhhhh
Q psy12523 362 TGAVGERLKEGSNINKSLTTLGLVISKLADSTSSSKNKDKFVPYRDSVLTWLLKDNLGGNSKTVMVATVSPAADNYEETL 441 (544)
Q Consensus 362 ~~~~~~~~~e~~~in~sL~~l~~vi~~La~~~~~~~~~~~~vp~r~SkLT~lL~~~lggns~~~~i~~vsp~~~~~~etl 441 (544)
.+..+.+..|+..||+||.+|+.|+.+|+.... ..++|||+|+||++|++
T Consensus 244 ~~~~~~~~~e~~~in~sl~~L~~vl~~l~~~~~-----~~~ip~r~SkLT~lL~~------------------------- 293 (328)
T cd00106 244 TGAEGDRLKEAKNINKSLSALGNVISALSSGQK-----KKHIPYRDSKLTRLLQD------------------------- 293 (328)
T ss_pred cCCchhhhHhHHhhhhhHHHHHHHHHHHHhcCC-----CCcCCCcCcHHHHHHHH-------------------------
Confidence 888999999999999999999999999976431 35777777777776654
Q ss_pred ccccccccccccccccccccCCCcceEEEEecCCccccHHHHHHhhcchhHHh
Q psy12523 442 STLRYADRAKRIVNHAVDNLGGNSKTVMVATVSPAADNYEETLSTLRYADRAK 494 (544)
Q Consensus 442 ~tL~~~~R~sklt~~l~~slggnskt~mi~~iSp~~~~~~eTl~TL~~a~rak 494 (544)
+|||+++|+||+||||...+++||++||+||+|||
T Consensus 294 ------------------~l~g~~~t~~I~~vsp~~~~~~eTl~tL~~a~r~~ 328 (328)
T cd00106 294 ------------------SLGGNSKTLMIANISPSSENYDETLSTLRFASRAK 328 (328)
T ss_pred ------------------hcCCCCeEEEEEEeCCchhhHHHHHHHHHHHHhcC
Confidence 45566677777777777789999999999999985
No 25
>KOG0244|consensus
Probab=100.00 E-value=1.6e-48 Score=419.79 Aligned_cols=289 Identities=39% Similarity=0.488 Sum_probs=243.6
Q ss_pred hhhhcccccceeeeecccccccccccccCC----CCCchhHHHHHHhhhccccccCCCCCcccceeEEEEEEEeecceee
Q psy12523 121 KQEALESMGISVQASGIKVEKNKYYLVNLN----ADPSLNELLVYYLKDCTLIGSSDKNDIQLSGNLKINFGLFFCFQVH 196 (544)
Q Consensus 121 ~~~~l~g~~~~i~a~g~~~sgkt~Tl~G~~----~~~Gli~~~~~~Lf~~~~~~~~~~~~~~~~~~v~~S~~Evy~e~v~ 196 (544)
.+..+.|++.+++||||+|+||||||.+.. .+.|+||+++..+|..+..... ..|.|.|+|+|+|++.|+
T Consensus 58 ~~~lf~gynatvlaygQtgsgkTytmgt~~~~~~~~~Gvipr~v~~~f~~i~~~~~------~~f~i~vs~vely~e~v~ 131 (913)
T KOG0244|consen 58 REKLFAGYNATVLAYGQTGSGKTYTMGTNDAPAQDTVGVIPRAVSTLFTRIGKTES------FVFRITVSFVELYNEEVL 131 (913)
T ss_pred HHHHhhhhcceeeeecccCCCceeecccccccccccCCcCcchHHHHHHHHHhhhc------cceeeeeeeeeccchhhh
Confidence 355899999999999999999999998872 2249999999999997765322 679999999999999999
Q ss_pred ecCCCCCCCCcceEEEcCCCCceeccCeEEEecCHHHHHHHHHhhhccccceeccCCCCCCCceeEEEEEEEEEeeccCC
Q psy12523 197 DLLDPKANKQSLKVREHNVLGPYVDGLSQLAVTSFQEIDSLMAEGNKSRTVAATNMNSESSRSHAVFSVVLTQTLVDTKS 276 (544)
Q Consensus 197 DLL~~~~~~~~l~i~e~~~~~~~v~~ls~~~v~s~~e~~~ll~~g~~~R~~~~t~~n~~SSRSH~i~~i~v~~~~~~~~~ 276 (544)
|||.|.....++++++ +.+++.+.|++++.|.+..++...+..|...|++++|.||..|||||+||++.++
T Consensus 132 dl~~~~~~~~~i~~~e-~~g~it~~glte~tv~~~~q~~~~L~~g~~~RtvasTnMN~qssRshAifti~lk-------- 202 (913)
T KOG0244|consen 132 DLLKPSRLKANIKLRE-PKGEITIRGLTEKTVRMKLQLLSRLEKGSLERTVASTNMNAQSSRSHAIFTITLK-------- 202 (913)
T ss_pred hhcChhhhhhceeccc-cCCceEEEeehHHHHHHHHHHHHHHHhchHHHHHHHHhcchhhhhhhHHHHHHHH--------
Confidence 9999887777788888 8899999999999999999999999998887777766666666666666655443
Q ss_pred CcccceeeeeeeeccchHHHHHHHHhhhcccccccccCCCCCCCceeEEEEEEEEEeecCCCCcccceeeeeeeeeccCC
Q psy12523 277 GVEGEKVARLSLVDLASEEIDSLMAEGNKSRTVAATNMNSESSRSHAVFSVVLTQTLVDTKSGVEGEKVARLSLVDLAGS 356 (544)
Q Consensus 277 ~~~~~~v~~~s~v~~~~ee~~~ll~~g~~~R~~~sT~~N~~SSRSH~Ifti~i~q~~~~~~~~~~~~~~s~l~~vDLags 356 (544)
|..... .....+++|+||||||+
T Consensus 203 ------------------------------------------------------q~kk~~---~~s~~~sKlhlVDLAGS 225 (913)
T KOG0244|consen 203 ------------------------------------------------------QRKKLS---KRSSFCSKLHLVDLAGS 225 (913)
T ss_pred ------------------------------------------------------HHHHhh---ccchhhhhhheeecccc
Confidence 322111 11134678999999999
Q ss_pred cchhccCcchhhhhccccccchhhhHHHHHHHhhcccCCCCCCCCccccchhhHHHHhhhhcCCCCceeeeeeeCCcccc
Q psy12523 357 ERAVKTGAVGERLKEGSNINKSLTTLGLVISKLADSTSSSKNKDKFVPYRDSVLTWLLKDNLGGNSKTVMVATVSPAADN 436 (544)
Q Consensus 357 e~~~~~~~~~~~~~e~~~in~sL~~l~~vi~~La~~~~~~~~~~~~vp~r~SkLT~lL~~~lggns~~~~i~~vsp~~~~ 436 (544)
|+..++.+.+++++|+.+||..|++|++||.+|.+... ..|+|||+|+||+
T Consensus 226 ER~kkT~a~gdrlKEgInIN~gLL~LgnVIsaLg~~kk-----~~~vpyRdSkltr------------------------ 276 (913)
T KOG0244|consen 226 ERVKKTKAEGDRLKEGININGGLLALGNVISALGEAKK-----GGEVPYRDSKLTR------------------------ 276 (913)
T ss_pred ccccccccchhhhhhccCcchHHHHHHHHHHHHHhhhc-----CCcccchHHHHHH------------------------
Confidence 99999999999999999999999999999999977432 3366666666555
Q ss_pred hhhhhccccccccccccccccccccCCCcceEEEEecCCccccHHHHHHhhcchhHHhhhhccceecCCccHHHHHHHHH
Q psy12523 437 YEETLSTLRYADRAKRIVNHAVDNLGGNSKTVMVATVSPAADNYEETLSTLRYADRAKRIVNHAVVNEDPNARIIRELRQ 516 (544)
Q Consensus 437 ~~etl~tL~~~~R~sklt~~l~~slggnskt~mi~~iSp~~~~~~eTl~TL~~a~rak~i~n~~~~n~~~~~~~i~~l~~ 516 (544)
+||++||||++|+||+||||+..+..||++||+||.||++|+|+|++|.++....+..|++
T Consensus 277 -------------------lLQdslgGns~tlmiaCiSpadsn~~EtlnTl~ya~Rak~iknk~vvN~d~~~~~~~~lK~ 337 (913)
T KOG0244|consen 277 -------------------LLQDSLGGNSDTLMIACISPADSNAQETLNTLRYADRAKQIKNKPVVNQDPKSFEMLKLKA 337 (913)
T ss_pred -------------------HHHHHhcCCcceeeeeecChhhhhhhhHHHHHHHhhHHHHhcccccccccHHHHHHHHHHH
Confidence 4567778888888899999999999999999999999999999999999998889999999
Q ss_pred HHHHHHHHHHhcC
Q psy12523 517 EVDKLKEMLISAG 529 (544)
Q Consensus 517 ei~~Lk~~l~~~~ 529 (544)
|+..|+.+|....
T Consensus 338 ql~~l~~ell~~~ 350 (913)
T KOG0244|consen 338 QLEPLQVELLSKA 350 (913)
T ss_pred HHHHHHHHHHhhc
Confidence 9999999998775
No 26
>KOG0246|consensus
Probab=100.00 E-value=5.9e-46 Score=378.54 Aligned_cols=248 Identities=34% Similarity=0.412 Sum_probs=207.0
Q ss_pred hcccccceeeeecccccccccccccCCCC------CchhHHHHHHhhhccccccCCCCCcccceeEEEEEEEeecceeee
Q psy12523 124 ALESMGISVQASGIKVEKNKYYLVNLNAD------PSLNELLVYYLKDCTLIGSSDKNDIQLSGNLKINFGLFFCFQVHD 197 (544)
Q Consensus 124 ~l~g~~~~i~a~g~~~sgkt~Tl~G~~~~------~Gli~~~~~~Lf~~~~~~~~~~~~~~~~~~v~~S~~Evy~e~v~D 197 (544)
.+.|--.+++||||+|+||||||.|.... .||--.+.+++|..+... .-....+.|+++|||||+.+|||
T Consensus 287 IF~~G~ATCFAYGQTGSGKT~TMggdfsgk~q~~s~giya~aa~Dvf~~L~~p----~Y~~~~l~v~~tFFEIYgGKvfD 362 (676)
T KOG0246|consen 287 IFEGGMATCFAYGQTGSGKTYTMGGDFSGKAQDCSKGIYALAARDVFRLLRQP----TYRKLDLKVYVTFFEIYGGKVYD 362 (676)
T ss_pred HHhCCceeeeeeccCCCCceeecccccCcccccccccchhhhhhHHHHHhccc----chhhcceEEEEEEEEEeCcchhh
Confidence 78888889999999999999999886433 599999999999854321 12345789999999999999999
Q ss_pred cCCCCCCCCcceEEEcCCCCceeccCeEEEecCHHHHHHHHHhhhccccceeccCCCCCCCceeEEEEEEEEEeeccCCC
Q psy12523 198 LLDPKANKQSLKVREHNVLGPYVDGLSQLAVTSFQEIDSLMAEGNKSRTVAATNMNSESSRSHAVFSVVLTQTLVDTKSG 277 (544)
Q Consensus 198 LL~~~~~~~~l~i~e~~~~~~~v~~ls~~~v~s~~e~~~ll~~g~~~R~~~~t~~n~~SSRSH~i~~i~v~~~~~~~~~~ 277 (544)
||++ +..|.+.||.+..++|.||.|..|.+.+|++.+|+.|..-|..+.|..|.+|||||+||+|.+.+.
T Consensus 363 LL~~---k~KLrvLEDg~QQVqVVGLqE~~v~~~eeVl~lIe~Gns~RtsG~TsANs~SSRSHAvfQIilr~~------- 432 (676)
T KOG0246|consen 363 LLND---KKKLRVLEDGNQQVQVVGLQEEEVSGVEEVLELIEKGNSCRTSGQTSANSNSSRSHAVFQIILRKH------- 432 (676)
T ss_pred hhcc---ccceEEeecCCceEEEeeceeeeccCHHHHHHHHHhcccccccCcccCcccccccceeEeeeeecC-------
Confidence 9996 568999999999999999999999999999999999999999999998888888888888877422
Q ss_pred cccceeeeeeeeccchHHHHHHHHhhhcccccccccCCCCCCCceeEEEEEEEEEeecCCCCcccceeeeeeeeeccCCc
Q psy12523 278 VEGEKVARLSLVDLASEEIDSLMAEGNKSRTVAATNMNSESSRSHAVFSVVLTQTLVDTKSGVEGEKVARLSLVDLAGSE 357 (544)
Q Consensus 278 ~~~~~v~~~s~v~~~~ee~~~ll~~g~~~R~~~sT~~N~~SSRSH~Ifti~i~q~~~~~~~~~~~~~~s~l~~vDLagse 357 (544)
.....+++++||||||+|
T Consensus 433 --------------------------------------------------------------~~~k~hGKfSlIDLAGnE 450 (676)
T KOG0246|consen 433 --------------------------------------------------------------GEFKLHGKFSLIDLAGNE 450 (676)
T ss_pred --------------------------------------------------------------CcceeEeEEEEEEccCCc
Confidence 112357889999999999
Q ss_pred chhcc-CcchhhhhccccccchhhhHHHHHHHhhcccCCCCCCCCccccchhhHHHHhhhhcCCCCceeeeeeeCCcccc
Q psy12523 358 RAVKT-GAVGERLKEGSNINKSLTTLGLVISKLADSTSSSKNKDKFVPYRDSVLTWLLKDNLGGNSKTVMVATVSPAADN 436 (544)
Q Consensus 358 ~~~~~-~~~~~~~~e~~~in~sL~~l~~vi~~La~~~~~~~~~~~~vp~r~SkLT~lL~~~lggns~~~~i~~vsp~~~~ 436 (544)
|...+ .+..+...||..||+||++|..||.+|.. ...|+|||.||||++|+|+|
T Consensus 451 RGaDts~adRqtRlEGAEINKSLLALKECIRaLg~-------nk~H~PFR~SKLTqVLRDSF------------------ 505 (676)
T KOG0246|consen 451 RGADTSSADRQTRLEGAEINKSLLALKECIRALGR-------NKSHLPFRGSKLTQVLRDSF------------------ 505 (676)
T ss_pred cCCcccccchhhhhhhhhhhHHHHHHHHHHHHhcC-------CCCCCCchhhhHHHHHHHhh------------------
Confidence 98754 45666677999999999999999999954 34578888887777766544
Q ss_pred hhhhhccccccccccccccccccccCC-CcceEEEEecCCccccHHHHHHhhcchhHHhhhh
Q psy12523 437 YEETLSTLRYADRAKRIVNHAVDNLGG-NSKTVMVATVSPAADNYEETLSTLRYADRAKRIV 497 (544)
Q Consensus 437 ~~etl~tL~~~~R~sklt~~l~~slgg-nskt~mi~~iSp~~~~~~eTl~TL~~a~rak~i~ 497 (544)
-| |+|||||+||||...+.+.||+|||||.|+|...
T Consensus 506 -------------------------IGenSrTcMIA~ISPg~~ScEhTLNTLRYAdRVKeLs 542 (676)
T KOG0246|consen 506 -------------------------IGENSRTCMIATISPGISSCEHTLNTLRYADRVKELS 542 (676)
T ss_pred -------------------------cCCCCceEEEEEeCCCcchhhhhHHHHHHHHHHHhhc
Confidence 44 7888888888888888888888888888888874
No 27
>KOG0247|consensus
Probab=100.00 E-value=5.8e-46 Score=388.87 Aligned_cols=249 Identities=33% Similarity=0.423 Sum_probs=207.1
Q ss_pred cchhhhhcccccceeeeecccccccccccccCCCCCchhHHHHHHhhhccccc---------------------------
Q psy12523 118 NINKQEALESMGISVQASGIKVEKNKYYLVNLNADPSLNELLVYYLKDCTLIG--------------------------- 170 (544)
Q Consensus 118 ~in~~~~l~g~~~~i~a~g~~~sgkt~Tl~G~~~~~Gli~~~~~~Lf~~~~~~--------------------------- 170 (544)
-|+. .+.|.+.-++.||-+|+||||||+|+..++||+||++.-||+-+...
T Consensus 106 lV~d--lLkgqn~LlFTyGVTgSGKTYTm~G~~~~~GIlPR~Ld~iF~siq~~~~~k~~~kp~~s~~~e~~~~~~alL~l 183 (809)
T KOG0247|consen 106 LVKD--LLKGQNSLLFTYGVTGSGKTYTMTGTPDRPGILPRALDVIFNSIQGRQAKKPVFKPLRSNLFEIKAEEDALLQL 183 (809)
T ss_pred HHHH--HHcccceeEEEeeccCCCceEEeecCCCCCCchHHHHHHHHHHhhceeccCceeccccchHHHHHHHHHHHHhh
Confidence 4666 99999999999999999999999999999999999999999977763
Q ss_pred --------cCCC------------------------CCcccceeEEEEEEEeecceeeecCCCCCCC---Cc-ceEEEcC
Q psy12523 171 --------SSDK------------------------NDIQLSGNLKINFGLFFCFQVHDLLDPKANK---QS-LKVREHN 214 (544)
Q Consensus 171 --------~~~~------------------------~~~~~~~~v~~S~~Evy~e~v~DLL~~~~~~---~~-l~i~e~~ 214 (544)
+... -+....|.|.|||+||||+.|||||.+.+.. +. ..+++|.
T Consensus 184 kr~~~~nd~~~ts~~~~~~~~e~~e~~~~~e~~~~~l~~d~~ysV~VSf~EIYN~~iYDLLe~~s~q~~~~~~~ll~~d~ 263 (809)
T KOG0247|consen 184 KREAMLNDRKSTSKAHRQSTPEYAEHIHVIEQPALELDEDIVYSVFVSFVEIYNNYIYDLLEDASFQGKLQKLKLLREDT 263 (809)
T ss_pred hhhhccccccCcchhhccccHHHHhhcchhcccccccCcCcEEEEEeeHHHHHHHHHHHhhccccccchhhhhhhhhhcc
Confidence 0000 0246789999999999999999999887532 22 5578999
Q ss_pred CCCceeccCeEEEecCHHHHHHHHHhhhccccceeccCCCCCCCceeEEEEEEEEEeeccCCCcccceeeeeeeeccchH
Q psy12523 215 VLGPYVDGLSQLAVTSFQEIDSLMAEGNKSRTVAATNMNSESSRSHAVFSVVLTQTLVDTKSGVEGEKVARLSLVDLASE 294 (544)
Q Consensus 215 ~~~~~v~~ls~~~v~s~~e~~~ll~~g~~~R~~~~t~~n~~SSRSH~i~~i~v~~~~~~~~~~~~~~~v~~~s~v~~~~e 294 (544)
++.+||+|++||+|.|.+|++++|+.|.++|++++|..|..|||||.||+|.+.+.+.+
T Consensus 264 ~~~~~Vkgl~~V~VssseEA~~l~~lGqk~r~~asT~lN~~SSRSHsVFtIkl~q~~~~--------------------- 322 (809)
T KOG0247|consen 264 NGNMYVKGLTEVEVSSSEEALELFQLGQKRRRVASTKLNANSSRSHSVFTIKLVQAPRS--------------------- 322 (809)
T ss_pred CCCeeeccccEEEeccHHHHHHHHHHHHhhhhhhheeccccccccceeEEEEeeecccc---------------------
Confidence 99999999999999999999999999999999888888887777777777766554322
Q ss_pred HHHHHHHhhhcccccccccCCCCCCCceeEEEEEEEEEeecCCCCcccceeeeeeeeeccCCcchhccCcchhhhhcccc
Q psy12523 295 EIDSLMAEGNKSRTVAATNMNSESSRSHAVFSVVLTQTLVDTKSGVEGEKVARLSLVDLAGSERAVKTGAVGERLKEGSN 374 (544)
Q Consensus 295 e~~~ll~~g~~~R~~~sT~~N~~SSRSH~Ifti~i~q~~~~~~~~~~~~~~s~l~~vDLagse~~~~~~~~~~~~~e~~~ 374 (544)
........|.|+|||||||||..++.+.|.|++|+++
T Consensus 323 -------------------------------------------~~s~~i~vSqlsLvDLAGSERt~rtq~sG~RLrEagN 359 (809)
T KOG0247|consen 323 -------------------------------------------QDSNQITVSQLSLVDLAGSERTNRTQNSGERLREAGN 359 (809)
T ss_pred -------------------------------------------cccCceeEEeeeeeecccchhcccccchhHHHHhhcc
Confidence 1234457889999999999999999999999999999
Q ss_pred ccchhhhHHHHHHHhhcccCCCCCCCCccccchhhHHHHhhhhcCCCCceeeeeeeCCcc
Q psy12523 375 INKSLTTLGLVISKLADSTSSSKNKDKFVPYRDSVLTWLLKDNLGGNSKTVMVATVSPAA 434 (544)
Q Consensus 375 in~sL~~l~~vi~~La~~~~~~~~~~~~vp~r~SkLT~lL~~~lggns~~~~i~~vsp~~ 434 (544)
||.||.+|+.|+.+|...+..+ .+..+|||+||||++++.+|.|..++.||.||+|..
T Consensus 360 INtSLmTLg~Cie~LR~nqk~k--s~~~VPyRdSKLThlfq~~f~G~gki~MIV~vnp~~ 417 (809)
T KOG0247|consen 360 INTSLMTLRRCIDVLRENQKSK--SQKIVPYRDSKLTHLFKNYFDGKGKIRMIVCVNPKA 417 (809)
T ss_pred ccHHHHHHHHHHHHHHHHhhhh--ccccCcchHHHHHHHHHHhcCCCCcEEEEEecCCch
Confidence 9999999999999998877642 337899999999999988777655555554444444
No 28
>COG5059 KIP1 Kinesin-like protein [Cytoskeleton]
Probab=100.00 E-value=5.6e-42 Score=371.62 Aligned_cols=298 Identities=38% Similarity=0.502 Sum_probs=236.2
Q ss_pred ceeEeeeeeeeccCC-------ccccccCcccccc-cccccchhhhhcccccceeeeecccccccccccccCCCCCchhH
Q psy12523 86 GEKVARLSLVDLAGS-------ERAVKTGAVGERL-KEGSNINKQEALESMGISVQASGIKVEKNKYYLVNLNADPSLNE 157 (544)
Q Consensus 86 ~~~~s~l~lvDLAGS-------Er~~~~~~~g~~~-~e~~~in~~~~l~g~~~~i~a~g~~~sgkt~Tl~G~~~~~Gli~ 157 (544)
....++-+.||+=++ +++-...++-+.+ +|...--.+.++.|++++++|||++|+||+|||.|...++|+||
T Consensus 39 ~~~~~~~~~~~~~~~~~~~~~fdkvf~~~~~q~~v~e~~~~~l~~~~l~g~N~TvfayGqTgsgKtyt~~G~~~~~Gii~ 118 (568)
T COG5059 39 LINTSKKSHVSLEKSKEGTYAFDKVFGPSATQEDVYEETIKPLIDSLLLGYNCTVFAYGQTGSGKTYTMSGTEEEPGIIP 118 (568)
T ss_pred eeecccccccccccccceEEEEeeccCCCCcHHHHHHHhhhhHHHHHHhcccceEEEEcccCCCceeEeecCccccchHH
Confidence 445556666666665 3333333332232 23333223459999999999999999999999999999999999
Q ss_pred HHHHHhhhccccccCCCCCcccceeEEEEEEEeecceeeecCCCCCCCCcceEEEcCCCCceeccCeEEEecCHHHHHHH
Q psy12523 158 LLVYYLKDCTLIGSSDKNDIQLSGNLKINFGLFFCFQVHDLLDPKANKQSLKVREHNVLGPYVDGLSQLAVTSFQEIDSL 237 (544)
Q Consensus 158 ~~~~~Lf~~~~~~~~~~~~~~~~~~v~~S~~Evy~e~v~DLL~~~~~~~~l~i~e~~~~~~~v~~ls~~~v~s~~e~~~l 237 (544)
+++..||+.+..... ...|.|.+||+|+|||+++|||.+.... +.++++...++.+.++++..+.+++|++.+
T Consensus 119 ~~l~~lf~~l~~~~~-----~~~~~v~is~lEiYnEk~~DLl~~~~~~--~~~~~~~~~~v~v~~l~~~~~~s~ee~l~~ 191 (568)
T COG5059 119 LSLKELFSKLEDLSM-----TKDFAVSISYLEIYNEKIYDLLSPNEES--LNIREDSLLGVKVAGLTEKHVSSKEEILDL 191 (568)
T ss_pred HHHHHHHHHHHhccc-----CcceeeEeehhHHHhhHHHhhccCcccc--ccccccCCCceEeecceEEecCChHHHHHH
Confidence 999999997665433 4578999999999999999999987433 789999999999999999999999999999
Q ss_pred HHhhhccccceeccCCCCCCCceeEEEEEEEEEeeccCCCcccceeeeeeeeccchHHHHHHHHhhhcccccccccCCCC
Q psy12523 238 MAEGNKSRTVAATNMNSESSRSHAVFSVVLTQTLVDTKSGVEGEKVARLSLVDLASEEIDSLMAEGNKSRTVAATNMNSE 317 (544)
Q Consensus 238 l~~g~~~R~~~~t~~n~~SSRSH~i~~i~v~~~~~~~~~~~~~~~v~~~s~v~~~~ee~~~ll~~g~~~R~~~sT~~N~~ 317 (544)
|++|..+|.++.|.+|..|||||+||++.+.+.
T Consensus 192 l~~~~~nr~~~~te~n~~ssRshsi~~i~~~~~----------------------------------------------- 224 (568)
T COG5059 192 LRKGEKNRTTASTEINDESSRSHSIFQIELASK----------------------------------------------- 224 (568)
T ss_pred HHHhhhhcccccchhccccccceEEEEEEEEEe-----------------------------------------------
Confidence 999888888877777776666666666655433
Q ss_pred CCCceeEEEEEEEEEeecCCCCcccceeeeeeeeeccCCcchhccCcchhhhhccccccchhhhHHHHHHHhhcccCCCC
Q psy12523 318 SSRSHAVFSVVLTQTLVDTKSGVEGEKVARLSLVDLAGSERAVKTGAVGERLKEGSNINKSLTTLGLVISKLADSTSSSK 397 (544)
Q Consensus 318 SSRSH~Ifti~i~q~~~~~~~~~~~~~~s~l~~vDLagse~~~~~~~~~~~~~e~~~in~sL~~l~~vi~~La~~~~~~~ 397 (544)
.... .....+++++|||||+|++...+..+.+..|+..||++|.+|+.|+.+|...
T Consensus 225 ---------------~~~~----~~~~~~~l~lvDLagSE~~~~~~~~~~r~~E~~~iN~sLl~Lg~vI~~L~~~----- 280 (568)
T COG5059 225 ---------------NKVS----GTSETSKLSLVDLAGSERAARTGNRGTRLKEGASINKSLLTLGNVINALGDK----- 280 (568)
T ss_pred ---------------ccCc----cceecceEEEEeeccccccchhhcccchhhhhhhhHhhHHHHHHHHHHHhcc-----
Confidence 2111 1112268999999999999999999999999999999999999999999652
Q ss_pred CCCCccccchhhHHHHhhhhcCCCCceeeeeeeCCcccchhhhhccccccccccccccccccccCCCcceEEEEecCCcc
Q psy12523 398 NKDKFVPYRDSVLTWLLKDNLGGNSKTVMVATVSPAADNYEETLSTLRYADRAKRIVNHAVDNLGGNSKTVMVATVSPAA 477 (544)
Q Consensus 398 ~~~~~vp~r~SkLT~lL~~~lggns~~~~i~~vsp~~~~~~etl~tL~~~~R~sklt~~l~~slggnskt~mi~~iSp~~ 477 (544)
.+..++|||+|+||++| +++|||+++|+||+||+|..
T Consensus 281 ~~~~~ipyReskLTRlL-------------------------------------------q~sLgG~~~~~~i~~Isp~~ 317 (568)
T COG5059 281 KKSGHIPYRESKLTRLL-------------------------------------------QDSLGGNCNTRVICTISPSS 317 (568)
T ss_pred ccCCccchhhhHHHHHH-------------------------------------------HHhcCCCccEEEEEEEcCCC
Confidence 23456667666666555 55666777778888888888
Q ss_pred ccHHHHHHhhcchhHHhhhhccceecC
Q psy12523 478 DNYEETLSTLRYADRAKRIVNHAVVNE 504 (544)
Q Consensus 478 ~~~~eTl~TL~~a~rak~i~n~~~~n~ 504 (544)
.+++||.+||+||.||+.|++++..|.
T Consensus 318 ~~~~et~~tL~~a~rak~I~~~~~~~~ 344 (568)
T COG5059 318 NSFEETINTLKFASRAKSIKNKIQVNS 344 (568)
T ss_pred CchHHHHHHHHHHHHHhhcCCcccccC
Confidence 999999999999999999999999995
No 29
>KOG0245|consensus
Probab=100.00 E-value=2.2e-42 Score=371.21 Aligned_cols=131 Identities=48% Similarity=0.729 Sum_probs=118.6
Q ss_pred CCCC--CCCCchHHHHHHHHHHHHhccCCCeeEeeeEeecccccceeehhhhhhHH------------------------
Q psy12523 1 MGSQ--DNKGIIPRLCDSLFDLIAKQESSELTYNPYIRTPIRKYEMIYSCRVSMLK------------------------ 54 (544)
Q Consensus 1 ~G~~--~~~Giipr~~~~lF~~i~~~~~~~~~y~~~v~~l~~~~~eiy~e~~~dll------------------------ 54 (544)
||.+ +++|||||+|+|||.+|...++.++.|.+.| ||+|||||+|+|||
T Consensus 106 MG~~~~~e~GIIPrlCEeLF~ri~~nq~~~~sy~Vev-----SymEIYcErVrDLL~~p~~kg~LRVREHP~lGPYVedL 180 (1221)
T KOG0245|consen 106 MGFQEPDEPGIIPRLCEELFSRIADNQSQQMSYSVEV-----SYMEIYCERVRDLLNAPKSKGGLRVREHPILGPYVEDL 180 (1221)
T ss_pred eccCCCCCCCchhHHHHHHHHHHhhcccccceEEEEE-----eehhHHHHHHHHHhhCCCCCCCceeeccCccChhHhHh
Confidence 8888 9999999999999999999999999999999 99999999999999
Q ss_pred -------------------------HHhcccCCCCcceEEEEEEEEeeecCCCCCcceeEeeeeeeeccCCccccccCcc
Q psy12523 55 -------------------------MIYGLKASNSTHAVFSVVLTQTLVDTKSGVEGEKVARLSLVDLAGSERAVKTGAV 109 (544)
Q Consensus 55 -------------------------~~~~n~~ssrSH~i~~i~~~~~~~~~~~~~~~~~~s~l~lvDLAGSEr~~~~~~~ 109 (544)
.|++|+.|||||+||+|+++|+.++...+..+.++|+|+|||||||||++.||+.
T Consensus 181 S~~aV~Sy~dI~~~md~GNkqRTtAATnMNdtSSRSHaVFtIvftQk~~~~~~~l~sek~SKIsLVDLAGSERasstGa~ 260 (1221)
T KOG0245|consen 181 SKLAVTSYADIQDLMDEGNKQRTTAATNMNDTSSRSHAVFTIVFTQKKHDQDTGLDSEKVSKISLVDLAGSERASSTGAN 260 (1221)
T ss_pred hhcccccHHHHHHHHHhcchhhhhhhhccccccccceeEEEEEEEeeeccccCCCcceeeeeeeEEeccCcccccccCCC
Confidence 6777788999999999999999998866778999999999999999999999999
Q ss_pred cccccccccchhhhhcccccceeeeeccc
Q psy12523 110 GERLKEGSNINKQEALESMGISVQASGIK 138 (544)
Q Consensus 110 g~~~~e~~~in~~~~l~g~~~~i~a~g~~ 138 (544)
|+|||||.+||| +|..++.+|-|+...
T Consensus 261 G~RLKEGa~INK--SLtTLGkVISALAe~ 287 (1221)
T KOG0245|consen 261 GDRLKEGANINK--SLTTLGKVISALAES 287 (1221)
T ss_pred ccchhcccccch--HHHHHHHHHHHHHHH
Confidence 999999999999 555555555555433
No 30
>KOG0241|consensus
Probab=100.00 E-value=8.9e-35 Score=307.66 Aligned_cols=135 Identities=52% Similarity=0.769 Sum_probs=119.8
Q ss_pred CCCCCCCCchHHHHHHHHHHHHhccCCCeeEeeeEeecccccceeehhhhhhHH--------------------------
Q psy12523 1 MGSQDNKGIIPRLCDSLFDLIAKQESSELTYNPYIRTPIRKYEMIYSCRVSMLK-------------------------- 54 (544)
Q Consensus 1 ~G~~~~~Giipr~~~~lF~~i~~~~~~~~~y~~~v~~l~~~~~eiy~e~~~dll-------------------------- 54 (544)
||++++||||||+|++||.+|++....+..|.+.| ||+|||||.+||||
T Consensus 112 mGt~~QpGiIPrlc~~lFe~I~k~~n~~~tfkVeV-----SymEIynEkv~DLLdPk~ssqtlkVrehsvlGp~vdGLS~ 186 (1714)
T KOG0241|consen 112 MGTAEQPGIIPRLCESLFERIDKESNPSQTFKVEV-----SYMEIYNEKVRDLLDPKGSSQTLKVREHSVLGPYVDGLSQ 186 (1714)
T ss_pred eccCCCCCchhHHHHHHHHHHHhccCCCceEEEEE-----EHHHHhhcchhhhhCCCCCcceeEEeecccccccccchhh
Confidence 89999999999999999999999999999999999 99999999999999
Q ss_pred ------------HHhcc-----------cCCCCcceEEEEEEEEeeecCCCCCcceeEeeeeeeeccCCccccccCcccc
Q psy12523 55 ------------MIYGL-----------KASNSTHAVFSVVLTQTLVDTKSGVEGEKVARLSLVDLAGSERAVKTGAVGE 111 (544)
Q Consensus 55 ------------~~~~n-----------~~ssrSH~i~~i~~~~~~~~~~~~~~~~~~s~l~lvDLAGSEr~~~~~~~g~ 111 (544)
+..|| ..|||||++|.|.|+|+-.+..++....+.|+|+|||||||||+.++|+.|+
T Consensus 187 laV~S~qdId~lm~egnKsrtvaatnmn~EssrsHaVFslvvtQ~l~D~ktg~SgeKvsklslVDLAgserasktga~g~ 266 (1714)
T KOG0241|consen 187 LAVTSFQDIDSLMSEGNKSRTVAATNMNEESSRSHAVFSLVVTQTLYDLKTGHSGEKVSKLSLVDLAGSERASKTGAAGS 266 (1714)
T ss_pred hhcccHHHHHHHHHhccccceeeeecccccccccceeEEEEEeeEEeccccCcchhheeeeeEEEeccccccccccchhh
Confidence 33444 3499999999999999999998889999999999999999999999999999
Q ss_pred cccccccchhhhhcccccceeeeeccccccc
Q psy12523 112 RLKEGSNINKQEALESMGISVQASGIKVEKN 142 (544)
Q Consensus 112 ~~~e~~~in~~~~l~g~~~~i~a~g~~~sgk 142 (544)
||+||.+||+ +|..++.+|-|+..+..||
T Consensus 267 rlkegsNink--SLttLglVIsaLadq~n~k 295 (1714)
T KOG0241|consen 267 RLKEGSNINK--SLTTLGLVISALADQKNGK 295 (1714)
T ss_pred hhhhcCCcch--hhHHHHHHHHHHHHhhcCC
Confidence 9999999999 5555555555555444444
No 31
>cd01363 Motor_domain Myosin and Kinesin motor domain. These ATPases belong to the P-loop NTPase family and provide the driving force in myosin and kinesin mediated processes.
Probab=100.00 E-value=7.8e-34 Score=267.99 Aligned_cols=168 Identities=47% Similarity=0.625 Sum_probs=139.6
Q ss_pred hcccccceeeeecccccccccccccCCCCCchhHHHHHHhhhccccccCCCCCcccceeEEEEEEEeecceeeecCCCCC
Q psy12523 124 ALESMGISVQASGIKVEKNKYYLVNLNADPSLNELLVYYLKDCTLIGSSDKNDIQLSGNLKINFGLFFCFQVHDLLDPKA 203 (544)
Q Consensus 124 ~l~g~~~~i~a~g~~~sgkt~Tl~G~~~~~Gli~~~~~~Lf~~~~~~~~~~~~~~~~~~v~~S~~Evy~e~v~DLL~~~~ 203 (544)
++.|++.||++||++|+||||||+|++.++|++|+++++
T Consensus 19 ~~~G~n~~i~~yG~tGsGKT~Tm~G~~~~~Giip~~~~~----------------------------------------- 57 (186)
T cd01363 19 ALDGYNVCIFAYGQTGSGKTYTMEGKREGAGIIPRTVTD----------------------------------------- 57 (186)
T ss_pred HhCCcceeEEEECCCCCcceEecCCCCCCCCcchHHHHH-----------------------------------------
Confidence 899999999999999999999999999999999999875
Q ss_pred CCCcceEEEcCCCCceeccCeEEEecCHHHHHHHHHhhhccccceeccCCCCCCCceeEEEEEEEEEeeccCCCccccee
Q psy12523 204 NKQSLKVREHNVLGPYVDGLSQLAVTSFQEIDSLMAEGNKSRTVAATNMNSESSRSHAVFSVVLTQTLVDTKSGVEGEKV 283 (544)
Q Consensus 204 ~~~~l~i~e~~~~~~~v~~ls~~~v~s~~e~~~ll~~g~~~R~~~~t~~n~~SSRSH~i~~i~v~~~~~~~~~~~~~~~v 283 (544)
+++++..|..
T Consensus 58 ------------------------------~~~ll~~g~~---------------------------------------- 67 (186)
T cd01363 58 ------------------------------VIDLMDKGNA---------------------------------------- 67 (186)
T ss_pred ------------------------------HHHHHhhccc----------------------------------------
Confidence 3444444444
Q ss_pred eeeeeeccchHHHHHHHHhhhcccccccccCCCCCCCceeEEEEEEEEEeecCCCCcccceeeeeeeeeccCCcchhccC
Q psy12523 284 ARLSLVDLASEEIDSLMAEGNKSRTVAATNMNSESSRSHAVFSVVLTQTLVDTKSGVEGEKVARLSLVDLAGSERAVKTG 363 (544)
Q Consensus 284 ~~~s~v~~~~ee~~~ll~~g~~~R~~~sT~~N~~SSRSH~Ifti~i~q~~~~~~~~~~~~~~s~l~~vDLagse~~~~~~ 363 (544)
.|..+.|.+|+.|||||++|+|++.+..... .+......++|+||||||+|+....+
T Consensus 68 ----------------------~R~~~~t~~N~~SSRsH~i~~i~v~~~~~~~-~~~~~~~~s~l~lVDLAGsE~~~~~~ 124 (186)
T cd01363 68 ----------------------NRTTAATAMNEHSSRSHSVFRIHFGGKNALA-SATEQPKVGKINLVDLAGSERIDFSG 124 (186)
T ss_pred ----------------------cccccccCCCCccCcccEEEEEEEEEeecCC-CCccceeeeeEEEEEccccccccccC
Confidence 4555555555566666666666665544322 22345678899999999999999999
Q ss_pred cchhhhhccccccchhhhHHHHHHHhhcccCCCCCCCCccccchhhHHHHhhhhcCCCCceeeeeeeCC
Q psy12523 364 AVGERLKEGSNINKSLTTLGLVISKLADSTSSSKNKDKFVPYRDSVLTWLLKDNLGGNSKTVMVATVSP 432 (544)
Q Consensus 364 ~~~~~~~e~~~in~sL~~l~~vi~~La~~~~~~~~~~~~vp~r~SkLT~lL~~~lggns~~~~i~~vsp 432 (544)
..+.+++|+..||+||.+|+.|+.+|+. +..++|||+|+||++|+++|+||+++.+|+||+|
T Consensus 125 ~~~~~~~e~~~in~sl~~L~~~i~~l~~-------~~~~vpyr~SkLT~lL~~~L~g~~~t~~i~~vsP 186 (186)
T cd01363 125 AEGSRLTETANINKSLSTLGNVISALAE-------RDSHVPYRESKLTRLLQDSLGGNSRTLMVACISP 186 (186)
T ss_pred CchhhHHHHHHHhhHHHHHHHHHHHHhc-------CCCCCCCcccHHHHHHHHhcCCCCeEEEEEEeCc
Confidence 9999999999999999999999999976 3468999999999999999999999999999998
No 32
>KOG4280|consensus
Probab=100.00 E-value=4e-34 Score=301.22 Aligned_cols=127 Identities=34% Similarity=0.539 Sum_probs=108.5
Q ss_pred CCC-CCCCCchHHHHHHHHHHHHhccCCCeeEeeeEeecccccceeehhhhhhHH-------------------------
Q psy12523 1 MGS-QDNKGIIPRLCDSLFDLIAKQESSELTYNPYIRTPIRKYEMIYSCRVSMLK------------------------- 54 (544)
Q Consensus 1 ~G~-~~~~Giipr~~~~lF~~i~~~~~~~~~y~~~v~~l~~~~~eiy~e~~~dll------------------------- 54 (544)
+|. ++..|||||+++.||.+|++.++.. .|.++| ||+|||||.|+|||
T Consensus 104 ~G~~~~~~GiiPraf~~LF~~I~~~~~~~-~f~vrv-----S~lEiYnE~i~DLL~~~~~~~l~lre~p~~Gv~V~nlse 177 (574)
T KOG4280|consen 104 IGPDPELRGLIPRAFEHLFRHIDERKEKT-RFLVRV-----SYLEIYNESIRDLLSPVNPKGLELREDPKCGVYVENLSE 177 (574)
T ss_pred eCCChhhCCchhHHHHHHHHHHHhccccc-eEEEEe-----ehHHHHhHHHHHHhCccCcCCceeeEcCCCceEecCcce
Confidence 455 6788999999999999999987655 899999 99999999999999
Q ss_pred -----------------------HHhcccCCCCcceEEEEEEEEeeecCCCCCcceeEeeeeeeeccCCccccccCcccc
Q psy12523 55 -----------------------MIYGLKASNSTHAVFSVVLTQTLVDTKSGVEGEKVARLSLVDLAGSERAVKTGAVGE 111 (544)
Q Consensus 55 -----------------------~~~~n~~ssrSH~i~~i~~~~~~~~~~~~~~~~~~s~l~lvDLAGSEr~~~~~~~g~ 111 (544)
.+..|+.|||||+||+|+|++.. ....+......|+|||||||||||+.+||+.|+
T Consensus 178 ~~v~s~~d~~~~l~~G~~nR~vgat~mn~~SsRSH~ift~~i~~~~-~~~~~~~~~~~~rlnlvDLagsEr~~~tga~G~ 256 (574)
T KOG4280|consen 178 MDVESAEDAQQLLVVGLANRRVGATSMNEESSRSHAIFTIHIESSE-KSDGGLMSGRSSKLNLVDLAGSERQSKTGAEGE 256 (574)
T ss_pred eecCCHHHHHHHHHHHHhhcchhhccCCcccccceEEEEEEEEeec-ccCCCccccccceeeeeeccchhhhcccCccch
Confidence 55567779999999999999932 223466788999999999999999999999999
Q ss_pred cccccccchhhhhcccccceeeeec
Q psy12523 112 RLKEGSNINKQEALESMGISVQASG 136 (544)
Q Consensus 112 ~~~e~~~in~~~~l~g~~~~i~a~g 136 (544)
|||||.+||+ +|..++.||.|+.
T Consensus 257 rlkEa~~IN~--SLs~LG~vI~aLv 279 (574)
T KOG4280|consen 257 RLKEATNINL--SLSALGNVISALV 279 (574)
T ss_pred hhhhhcccch--hHHHHHHHHHHHh
Confidence 9999999999 5555555555544
No 33
>KOG0243|consensus
Probab=99.97 E-value=1.2e-32 Score=302.01 Aligned_cols=123 Identities=29% Similarity=0.437 Sum_probs=108.2
Q ss_pred CCCCCCchHHHHHHHHHHHHhccCCCeeEeeeEeecccccceeehhhhhhHH----------------------------
Q psy12523 3 SQDNKGIIPRLCDSLFDLIAKQESSELTYNPYIRTPIRKYEMIYSCRVSMLK---------------------------- 54 (544)
Q Consensus 3 ~~~~~Giipr~~~~lF~~i~~~~~~~~~y~~~v~~l~~~~~eiy~e~~~dll---------------------------- 54 (544)
.|+++|||||++.+||+..+... -.|.++| +|+|+|||.++|||
T Consensus 157 l~~~aGIIPRal~~IFd~Le~~~---~EYsvKV-----SfLELYNEEl~DLLa~~~~~~~~~~~k~~~~~~~~kggV~vk 228 (1041)
T KOG0243|consen 157 LPSEAGIIPRALRQIFDTLEAQG---AEYSVKV-----SFLELYNEELTDLLASEDTSDKKLRIKDDSTIVDGKGGVIVK 228 (1041)
T ss_pred CCccCCcchHHHHHHHHHHHhcC---CeEEEEE-----EehhhhhHHHHHhcCCccccccccccccCCcccCCcCcEEEe
Confidence 46889999999999999887544 4699999 99999999999999
Q ss_pred ---------------------------HHhcccCCCCcceEEEEEEEEeeecCCCCCcceeEeeeeeeeccCCccccccC
Q psy12523 55 ---------------------------MIYGLKASNSTHAVFSVVLTQTLVDTKSGVEGEKVARLSLVDLAGSERAVKTG 107 (544)
Q Consensus 55 ---------------------------~~~~n~~ssrSH~i~~i~~~~~~~~~~~~~~~~~~s~l~lvDLAGSEr~~~~~ 107 (544)
.|..|+.|||||+||+|+|..+..+. .|+.-++.|+||||||||||-+.++|
T Consensus 229 GlEEi~V~~A~ei~klLekGs~kRrtAaTl~N~~SSRSHsIFsItvhike~t~-~geelvK~GKLNLVDLAGSENI~RSG 307 (1041)
T KOG0243|consen 229 GLEEIIVTNADEIYKLLEKGSKKRRTAATLMNDQSSRSHSIFSITVHIKENTP-EGEELVKIGKLNLVDLAGSENISRSG 307 (1041)
T ss_pred cceeeeecchhHHHHHHHhhhhHhHHHHHHhhhhccccceEEEEEEEEecCCC-cchhhHhhcccceeeccccccccccc
Confidence 66677779999999999999887665 56778899999999999999999999
Q ss_pred cccccccccccchhhhhcccccceeeeec
Q psy12523 108 AVGERLKEGSNINKQEALESMGISVQASG 136 (544)
Q Consensus 108 ~~g~~~~e~~~in~~~~l~g~~~~i~a~g 136 (544)
+.|.|-+|++.||+ +|+.++-+|-|+-
T Consensus 308 A~~~RArEAG~INq--SLLTLGRVInALV 334 (1041)
T KOG0243|consen 308 ARNGRAREAGEINQ--SLLTLGRVINALV 334 (1041)
T ss_pred cccchhHHhhhhhH--HHHHHHHHHHHHH
Confidence 99999999999999 7776666655544
No 34
>KOG0239|consensus
Probab=99.97 E-value=6.7e-33 Score=302.08 Aligned_cols=125 Identities=36% Similarity=0.469 Sum_probs=111.9
Q ss_pred CC-CCCCCCchHHHHHHHHHHHHhccCCCeeEeeeEeecccccceeehhhhhhHH-------------------------
Q psy12523 1 MG-SQDNKGIIPRLCDSLFDLIAKQESSELTYNPYIRTPIRKYEMIYSCRVSMLK------------------------- 54 (544)
Q Consensus 1 ~G-~~~~~Giipr~~~~lF~~i~~~~~~~~~y~~~v~~l~~~~~eiy~e~~~dll------------------------- 54 (544)
+| +|+++|||||++++||..+..... .|.|...+ +|+|||||.|+|||
T Consensus 411 ~G~~~~~~Giipral~~lF~~~~~~~~-g~~y~~~~-----s~~EIYNe~i~DlL~~~~~~~k~~I~~~~~~~~~V~~~t 484 (670)
T KOG0239|consen 411 SGPTPEDPGIIPRALEKLFRTITSLKS-GWKYDKTV-----SMLEIYNEAIRDLLSDESYVGKLEIVDDAEGNLMVPLLT 484 (670)
T ss_pred cCCCcccCCccHHHHHHHHHHHHhhcc-CceEEeee-----ehhHHHHHHHHHhccccccccceeEEEcCCCceecccce
Confidence 46 689999999999999999999888 99999999 99999999999998
Q ss_pred ------------------------HHhcccCCCCcceEEEEEEEEeeecCCCCCcceeEeeeeeeeccCCccccccCccc
Q psy12523 55 ------------------------MIYGLKASNSTHAVFSVVLTQTLVDTKSGVEGEKVARLSLVDLAGSERAVKTGAVG 110 (544)
Q Consensus 55 ------------------------~~~~n~~ssrSH~i~~i~~~~~~~~~~~~~~~~~~s~l~lvDLAGSEr~~~~~~~g 110 (544)
.|..|+.|||||+||+|+|...+... +....++|||||||||||+++++++|
T Consensus 485 ~~~V~s~~~v~~ll~~g~~nRsv~~T~~Ne~SSRSH~v~~v~v~g~~~~t----~~~~~g~l~LVDLAGSER~~~s~~tG 560 (670)
T KOG0239|consen 485 VIKVGSSEEVDILLEIGLSNRSVASTASNERSSRSHLVFRVRIRGINELT----GIRVTGVLNLVDLAGSERVSKSGVTG 560 (670)
T ss_pred EEecCCHHHHHHHHHHhhccccccccccchhhhccceEEEEEEeccccCc----ccccccceeEeecccCcccCcCCCch
Confidence 44556669999999999999985554 77889999999999999999999999
Q ss_pred ccccccccchhhhhcccccceeeeecc
Q psy12523 111 ERLKEGSNINKQEALESMGISVQASGI 137 (544)
Q Consensus 111 ~~~~e~~~in~~~~l~g~~~~i~a~g~ 137 (544)
+||+|+++||+ +|..++.+|.|+++
T Consensus 561 ~RlkE~Q~INk--SLS~LgdVi~AL~~ 585 (670)
T KOG0239|consen 561 ERLKEAQNINK--SLSALGDVISALAS 585 (670)
T ss_pred hhhHHHHHhch--hhhhhHHHHHHHhh
Confidence 99999999999 77666677766664
No 35
>KOG0242|consensus
Probab=99.97 E-value=3.1e-32 Score=298.10 Aligned_cols=122 Identities=34% Similarity=0.548 Sum_probs=108.0
Q ss_pred CCCCCCCCchHHHHHHHHHHHHhccCCCeeEeeeEeecccccceeehhhhhhHH--------------------------
Q psy12523 1 MGSQDNKGIIPRLCDSLFDLIAKQESSELTYNPYIRTPIRKYEMIYSCRVSMLK-------------------------- 54 (544)
Q Consensus 1 ~G~~~~~Giipr~~~~lF~~i~~~~~~~~~y~~~v~~l~~~~~eiy~e~~~dll-------------------------- 54 (544)
+|++++|||||+++.|||++|++.. +..|.+.| ||+|||||.|+|||
T Consensus 105 ~G~~~~PGii~la~~dif~~I~~~~--~r~f~v~v-----SYlEIYNE~I~DLL~~~~~~L~irED~~~gi~V~gL~e~~ 177 (675)
T KOG0242|consen 105 SGSEDDPGIIPLAMKDIFEKIDKSG--EREFSVRV-----SYLEIYNERIRDLLNPDGGDLRLREDSEGGIVVPGLTEET 177 (675)
T ss_pred eccCCCCCeeehHHHHHHHHHHhcC--CceeEEEE-----EEEEEeccccccccCCCCCCceEeEcCCCCEEecCCeeec
Confidence 5899999999999999999999987 56688888 99999999999999
Q ss_pred ---------------------HHhcccCCCCcceEEEEEEEEeeecCCCCCcceeEeeeeeeeccCCccccccCcccccc
Q psy12523 55 ---------------------MIYGLKASNSTHAVFSVVLTQTLVDTKSGVEGEKVARLSLVDLAGSERAVKTGAVGERL 113 (544)
Q Consensus 55 ---------------------~~~~n~~ssrSH~i~~i~~~~~~~~~~~~~~~~~~s~l~lvDLAGSEr~~~~~~~g~~~ 113 (544)
.|..|..|||||+||+|+|.++..... . ..|+|+|||||||||+++|++.|.||
T Consensus 178 v~s~e~~~~ll~~g~~~R~~g~T~~N~~SSRSHaIl~i~i~s~~~~~~----~-~~s~L~lIDLAGSERas~T~~~G~Rl 252 (675)
T KOG0242|consen 178 VSSREELLELLQKGNKNRTTGETNLNEQSSRSHAILRITVESRGREAS----S-RVSKLNLIDLAGSERASRTGNEGVRL 252 (675)
T ss_pred CCCHHHHHHHHHHhhccCcccccccccccchhhheeeEEEEecccccc----c-hhheehhhhhhhhhhhhhhhccceec
Confidence 555666799999999999999976642 2 88999999999999999999999999
Q ss_pred cccccchhhhhcccccceeeeec
Q psy12523 114 KEGSNINKQEALESMGISVQASG 136 (544)
Q Consensus 114 ~e~~~in~~~~l~g~~~~i~a~g 136 (544)
+||++||+ +|+.++.||.+++
T Consensus 253 kEG~~INr--SLlaLgtVI~~Ls 273 (675)
T KOG0242|consen 253 KEGAHINR--SLLALGTVINKLS 273 (675)
T ss_pred cccchhhH--HHHHHHHHHHHHc
Confidence 99999999 7777777666554
No 36
>PLN03188 kinesin-12 family protein; Provisional
Probab=99.97 E-value=2.6e-31 Score=294.29 Aligned_cols=125 Identities=34% Similarity=0.527 Sum_probs=105.3
Q ss_pred CCCCchHHHHHHHHHHHHhc----cCCCeeEeeeEeecccccceeehhhhhhHH--------------------------
Q psy12523 5 DNKGIIPRLCDSLFDLIAKQ----ESSELTYNPYIRTPIRKYEMIYSCRVSMLK-------------------------- 54 (544)
Q Consensus 5 ~~~Giipr~~~~lF~~i~~~----~~~~~~y~~~v~~l~~~~~eiy~e~~~dll-------------------------- 54 (544)
+++|||||++++||++|... .+..+.|.+++ ||+|||||.|+|||
T Consensus 198 ~e~GIIPRaledLF~~I~e~q~k~~d~~~~y~V~v-----SyLEIYNEkI~DLLsp~~k~L~IRED~kgGv~VeGLTEv~ 272 (1320)
T PLN03188 198 DQQGLTPRVFERLFARINEEQIKHADRQLKYQCRC-----SFLEIYNEQITDLLDPSQKNLQIREDVKSGVYVENLTEEY 272 (1320)
T ss_pred ccCCchHHHHHHHHHHHHhhhhhccccccceEEEE-----EEEeeecCcceeccccccCCceEEEcCCCCeEeCCCeEEe
Confidence 57899999999999999754 24567899999 99999999999999
Q ss_pred ---------------------HHhcccCCCCcceEEEEEEEEeeecCCCCCcceeEeeeeeeeccCCccccccCcccccc
Q psy12523 55 ---------------------MIYGLKASNSTHAVFSVVLTQTLVDTKSGVEGEKVARLSLVDLAGSERAVKTGAVGERL 113 (544)
Q Consensus 55 ---------------------~~~~n~~ssrSH~i~~i~~~~~~~~~~~~~~~~~~s~l~lvDLAGSEr~~~~~~~g~~~ 113 (544)
.|..|..|||||+||+|+|++.......+......|+|+|||||||||+.++++.|+||
T Consensus 273 V~S~ED~l~LL~~G~~nR~tasT~mN~~SSRSHaIFtI~Ves~~k~~~dg~ss~r~SkLnLVDLAGSER~kkTga~G~RL 352 (1320)
T PLN03188 273 VKTMKDVTQLLIKGLSNRRTGATSINAESSRSHSVFTCVVESRCKSVADGLSSFKTSRINLVDLAGSERQKLTGAAGDRL 352 (1320)
T ss_pred CCCHHHHHHHHHHHhccceeccCCCCCccCCCceeEEEEEEEeecccCCCCcceEEEEEEEEECCCchhccccCcccHHH
Confidence 33345569999999999999876655445566789999999999999999999999999
Q ss_pred cccccchhhhhcccccceeeeec
Q psy12523 114 KEGSNINKQEALESMGISVQASG 136 (544)
Q Consensus 114 ~e~~~in~~~~l~g~~~~i~a~g 136 (544)
+|+.+||+ +|..++.||.++.
T Consensus 353 kEA~~INK--SLsaLGnVI~ALa 373 (1320)
T PLN03188 353 KEAGNINR--SLSQLGNLINILA 373 (1320)
T ss_pred HHHHHHhH--HHHHHHHHHHHHH
Confidence 99999999 6666666665544
No 37
>KOG0244|consensus
Probab=99.96 E-value=1.8e-31 Score=288.30 Aligned_cols=126 Identities=38% Similarity=0.524 Sum_probs=110.8
Q ss_pred CCCC-----CCCCchHHHHHHHHHHHHhccCCCeeEeeeEeecccccceeehhhhhhHH---------------------
Q psy12523 1 MGSQ-----DNKGIIPRLCDSLFDLIAKQESSELTYNPYIRTPIRKYEMIYSCRVSMLK--------------------- 54 (544)
Q Consensus 1 ~G~~-----~~~Giipr~~~~lF~~i~~~~~~~~~y~~~v~~l~~~~~eiy~e~~~dll--------------------- 54 (544)
||+. ++.|||||+++.+|.+|.+.+. +.|.+.| +|+|+|+|.+.||+
T Consensus 83 mgt~~~~~~~~~Gvipr~v~~~f~~i~~~~~--~~f~i~v-----s~vely~e~v~dl~~~~~~~~~i~~~e~~g~it~~ 155 (913)
T KOG0244|consen 83 MGTNDAPAQDTVGVIPRAVSTLFTRIGKTES--FVFRITV-----SFVELYNEEVLDLLKPSRLKANIKLREPKGEITIR 155 (913)
T ss_pred cccccccccccCCcCcchHHHHHHHHHhhhc--cceeeee-----eeeeccchhhhhhcChhhhhhceeccccCCceEEE
Confidence 5665 3459999999999999999887 6688888 99999999999998
Q ss_pred ---------------------------HHhcccCCCCcceEEEEEEEEeeecCCCCCcceeEeeeeeeeccCCccccccC
Q psy12523 55 ---------------------------MIYGLKASNSTHAVFSVVLTQTLVDTKSGVEGEKVARLSLVDLAGSERAVKTG 107 (544)
Q Consensus 55 ---------------------------~~~~n~~ssrSH~i~~i~~~~~~~~~~~~~~~~~~s~l~lvDLAGSEr~~~~~ 107 (544)
.+++|..|||||+||||.+++..... .....+|+|+|||||||||+++|+
T Consensus 156 glte~tv~~~~q~~~~L~~g~~~RtvasTnMN~qssRshAifti~lkq~kk~~---~~s~~~sKlhlVDLAGSER~kkT~ 232 (913)
T KOG0244|consen 156 GLTEKTVRMKLQLLSRLEKGSLERTVASTNMNAQSSRSHAIFTITLKQRKKLS---KRSSFCSKLHLVDLAGSERVKKTK 232 (913)
T ss_pred eehHHHHHHHHHHHHHHHhchHHHHHHHHhcchhhhhhhHHHHHHHHHHHHhh---ccchhhhhhheeeccccccccccc
Confidence 67788889999999999999865443 245678999999999999999999
Q ss_pred cccccccccccchhhhhcccccceeeeeccc
Q psy12523 108 AVGERLKEGSNINKQEALESMGISVQASGIK 138 (544)
Q Consensus 108 ~~g~~~~e~~~in~~~~l~g~~~~i~a~g~~ 138 (544)
++|+|||||.+||. .|+.++.+|.|+|..
T Consensus 233 a~gdrlKEgInIN~--gLL~LgnVIsaLg~~ 261 (913)
T KOG0244|consen 233 AEGDRLKEGINING--GLLALGNVISALGEA 261 (913)
T ss_pred cchhhhhhccCcch--HHHHHHHHHHHHHhh
Confidence 99999999999999 888888888888844
No 38
>cd01370 KISc_KIP3_like Kinesin motor domain, KIP3-like subgroup. The yeast kinesin KIP3 plays a role in positioning the mitotic spindle. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In most kinesins, the motor domain is found at the N-terminus (N-type). N-type kinesins are (+) end-directed motors, i.e. they transport cargo towards the (+) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain, which repositions the other head domain through the coiled-coil domain close to a sec
Probab=99.96 E-value=1.4e-29 Score=260.53 Aligned_cols=127 Identities=31% Similarity=0.469 Sum_probs=108.8
Q ss_pred CCCCCCCCchHHHHHHHHHHHHhccCCCeeEeeeEeecccccceeehhhhhhHH--------------------------
Q psy12523 1 MGSQDNKGIIPRLCDSLFDLIAKQESSELTYNPYIRTPIRKYEMIYSCRVSMLK-------------------------- 54 (544)
Q Consensus 1 ~G~~~~~Giipr~~~~lF~~i~~~~~~~~~y~~~v~~l~~~~~eiy~e~~~dll-------------------------- 54 (544)
+|+++++|||||++++||+.+++.. .++.|.+++ ||+|||||.++|||
T Consensus 106 ~G~~~~~Giipr~~~~LF~~i~~~~-~~~~~~v~v-----S~~EIyne~v~DLL~~~~~~l~i~ed~~~~~~v~gl~~~~ 179 (338)
T cd01370 106 LGTDSDPGLMVLTMKDLFDKIEERK-DDKEFEVSL-----SYLEIYNETIRDLLSPSSGPLELREDPNQGIVVAGLTEHQ 179 (338)
T ss_pred cCCCCCCchHHHHHHHHHHhhhhcc-cCceEEEEE-----EEEEEECCEEEECCCCCCCCceEEEcCCCCEEeCCcEEEE
Confidence 5888999999999999999998866 367899999 99999999999999
Q ss_pred ---------------------HHhcccCCCCcceEEEEEEEEeeecCCCCCcceeEeeeeeeeccCCccccccCcccccc
Q psy12523 55 ---------------------MIYGLKASNSTHAVFSVVLTQTLVDTKSGVEGEKVARLSLVDLAGSERAVKTGAVGERL 113 (544)
Q Consensus 55 ---------------------~~~~n~~ssrSH~i~~i~~~~~~~~~~~~~~~~~~s~l~lvDLAGSEr~~~~~~~g~~~ 113 (544)
.+..|..|||||+||+|+|.+..... ........|+|+|||||||||..++++.|+++
T Consensus 180 v~s~~e~~~~l~~g~~~R~~~~t~~n~~SSRSH~i~~i~i~~~~~~~-~~~~~~~~s~l~~VDLAGsEr~~~~~~~g~~~ 258 (338)
T cd01370 180 PKSAEEILELLMKGNRNRTQEPTEANATSSRSHAVLQITVRQKDRTA-SINQQVRIGKLSLIDLAGSERASATNNRGQRL 258 (338)
T ss_pred eCCHHHHHHHHHHHHhhcccccccccCccCcceEEEEEEEEEEecCC-CCCCcEEEEEEEEEECCCCccccccCCCCccc
Confidence 33445569999999999999986542 22356789999999999999999999999999
Q ss_pred cccccchhhhhcccccceeeeec
Q psy12523 114 KEGSNINKQEALESMGISVQASG 136 (544)
Q Consensus 114 ~e~~~in~~~~l~g~~~~i~a~g 136 (544)
+|+.+||+ +|..++.||.++.
T Consensus 259 ~E~~~IN~--SL~~L~~vi~~L~ 279 (338)
T cd01370 259 KEGANINR--SLLALGNCINALV 279 (338)
T ss_pred cccchhhH--HHHHHHHHHHHHH
Confidence 99999999 7766666666554
No 39
>KOG0240|consensus
Probab=99.96 E-value=1.4e-29 Score=259.91 Aligned_cols=120 Identities=35% Similarity=0.531 Sum_probs=105.4
Q ss_pred CCCCchHHHHHHHHHHHHhccCCCeeEeeeEeecccccceeehhhhhhHH------------------------------
Q psy12523 5 DNKGIIPRLCDSLFDLIAKQESSELTYNPYIRTPIRKYEMIYSCRVSMLK------------------------------ 54 (544)
Q Consensus 5 ~~~Giipr~~~~lF~~i~~~~~~~~~y~~~v~~l~~~~~eiy~e~~~dll------------------------------ 54 (544)
...|||||+|.+||++|....+ +..|++.| +|+|||+|.++|||
T Consensus 108 ~~~GIipRi~~diF~~Iys~~~-n~efhVkV-----sy~EIYmEKi~DLL~~~k~nlsvheDK~~v~~vkG~t~~~v~s~ 181 (607)
T KOG0240|consen 108 EEMGIIPRILNDIFDHIYSMEE-NLEFHVKV-----SYFEIYMEKIRDLLDPEKTNLSVHEDKNRVPYVKGVTERFVSSP 181 (607)
T ss_pred hhcCcHHHHHHHHHHHHhcCcc-cceEEEEE-----EeehhhhhHHHHHhCcccCCceeecccCCCceecCceeEEecCH
Confidence 4679999999999999998776 58999999 99999999999999
Q ss_pred -----------------HHhcccCCCCcceEEEEEEEEeeecCCCCCcceeEeeeeeeeccCCccccccCcccccccccc
Q psy12523 55 -----------------MIYGLKASNSTHAVFSVVLTQTLVDTKSGVEGEKVARLSLVDLAGSERAVKTGAVGERLKEGS 117 (544)
Q Consensus 55 -----------------~~~~n~~ssrSH~i~~i~~~~~~~~~~~~~~~~~~s~l~lvDLAGSEr~~~~~~~g~~~~e~~ 117 (544)
.+++|..|||||+||+|+|.|.+.+. .....|+|-||||||||++.++|+.|.-+.|+.
T Consensus 182 d~v~~~i~~g~~nr~va~t~mn~~sSRSHsIF~i~VkQ~n~e~----~~~~~gkLyLVDLaGSEkvsKtga~g~vleEaK 257 (607)
T KOG0240|consen 182 DEVLDVIDEGKSNRHVAVTNMNEHSSRSHSIFLIHVKQENVED----KRKLSGKLYLVDLAGSEKVSKTGAEGAVLEEAK 257 (607)
T ss_pred HHHHHHHhcccccchhhhccccccccccceEEEEEEEeccccc----hhhccccEEEEEcccccccCCCCccchhHHHHh
Confidence 45567779999999999999997776 678999999999999999999999999999999
Q ss_pred cchhhhhcccccceeeeec
Q psy12523 118 NINKQEALESMGISVQASG 136 (544)
Q Consensus 118 ~in~~~~l~g~~~~i~a~g 136 (544)
+||+ +|..++.+|.|+.
T Consensus 258 ~INk--SLsaLgnvI~aLa 274 (607)
T KOG0240|consen 258 NINK--SLSALGNVINALA 274 (607)
T ss_pred hhhh--hHHHHHHHHHHHh
Confidence 9999 5555555544443
No 40
>cd01373 KISc_KLP2_like Kinesin motor domain, KLP2-like subgroup. Members of this subgroup seem to play a role in mitosis and meiosis. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In most kinesins, the motor domain is found at the N-terminus (N-type). N-type kinesins are (+) end-directed motors, i.e. they transport cargo towards the (+) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain, which repositions the other head domain through the coiled-coil domain close to a second
Probab=99.96 E-value=3.9e-29 Score=257.09 Aligned_cols=123 Identities=35% Similarity=0.489 Sum_probs=102.8
Q ss_pred CCCCchHHHHHHHHHHHHhccC---CCeeEeeeEeecccccceeehhhhhhHH---------------------------
Q psy12523 5 DNKGIIPRLCDSLFDLIAKQES---SELTYNPYIRTPIRKYEMIYSCRVSMLK--------------------------- 54 (544)
Q Consensus 5 ~~~Giipr~~~~lF~~i~~~~~---~~~~y~~~v~~l~~~~~eiy~e~~~dll--------------------------- 54 (544)
+++|||||++++||+.|+..++ ..+.|.+++ ||+|||||.++|||
T Consensus 105 ~~~Giipr~~~~Lf~~i~~~~~~~~~~~~~~v~~-----S~~EIyne~v~DLL~~~~~~l~i~e~~~~~~~v~gl~~~~v 179 (337)
T cd01373 105 GLQGVIPRIFEYLFSLIQREEEKRGDGLKFLCKC-----SFLEIYNEQITDLLDPTSRNLKIREDIKKGVYVENLTEEYV 179 (337)
T ss_pred cCCCHHHHHHHHHHHHHHhhhhhcccCceEEEEE-----EEEeecCCEeeeCCCCCCCCceEEECCCCCEEeCCCEEEEe
Confidence 4689999999999999976532 356788899 99999999999998
Q ss_pred --------------------HHhcccCCCCcceEEEEEEEEeeecCCCCCcceeEeeeeeeeccCCccccccCccccccc
Q psy12523 55 --------------------MIYGLKASNSTHAVFSVVLTQTLVDTKSGVEGEKVARLSLVDLAGSERAVKTGAVGERLK 114 (544)
Q Consensus 55 --------------------~~~~n~~ssrSH~i~~i~~~~~~~~~~~~~~~~~~s~l~lvDLAGSEr~~~~~~~g~~~~ 114 (544)
.+..|..|||||+||+|+|.+..... +......|+|+|||||||||..++++.|++++
T Consensus 180 ~s~~e~~~ll~~g~~~R~~~~t~~n~~SSRSH~i~~i~v~~~~~~~--~~~~~~~s~l~~VDLAGSEr~~~~~~~g~~~~ 257 (337)
T cd01373 180 SSYEDVYQVLLKGLSNRKVAATSMNSESSRSHAVFTCTIESWEKKA--SSTNIRTSRLNLVDLAGSERQKDDGAEGVRLK 257 (337)
T ss_pred CCHHHHHHHHHHHHhccCcccCcCCCCCCCccEEEEEEEEEeecCC--CCCcEEEEEEEEEECCCCCcccccCCccHhhh
Confidence 33445669999999999999875432 23356789999999999999999999999999
Q ss_pred ccccchhhhhcccccceeeeec
Q psy12523 115 EGSNINKQEALESMGISVQASG 136 (544)
Q Consensus 115 e~~~in~~~~l~g~~~~i~a~g 136 (544)
|+.+||+ +|..++.||.++.
T Consensus 258 E~~~IN~--SL~~L~~vi~aL~ 277 (337)
T cd01373 258 EAKNINK--SLSTLGHVIMALV 277 (337)
T ss_pred hhccccH--HHHHHHHHHHHHH
Confidence 9999999 7777777666654
No 41
>cd01368 KISc_KIF23_like Kinesin motor domain, KIF23-like subgroup. Members of this group may play a role in mitosis. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In most kinesins, the motor domain is found at the N-terminus (N-type). N-type kinesins are (+) end-directed motors, i.e. they transport cargo towards the (+) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain, which repositions the other head domain through the coiled-coil domain close to a second tubulin dimer, a
Probab=99.94 E-value=1.6e-27 Score=245.70 Aligned_cols=122 Identities=37% Similarity=0.547 Sum_probs=102.3
Q ss_pred CCCCCCCCchHHHHHHHHHHHHhccCCCeeEeeeEeecccccceeehhhhhhHH--------------------------
Q psy12523 1 MGSQDNKGIIPRLCDSLFDLIAKQESSELTYNPYIRTPIRKYEMIYSCRVSMLK-------------------------- 54 (544)
Q Consensus 1 ~G~~~~~Giipr~~~~lF~~i~~~~~~~~~y~~~v~~l~~~~~eiy~e~~~dll-------------------------- 54 (544)
+|+++++|||||++++||+.+.+ |.+++ ||+|||||.++|||
T Consensus 107 ~G~~~~~Gli~r~~~~lF~~~~~-------~~v~~-----S~~EIyne~v~DLL~~~~~~~~~~~~l~i~ed~~~~~~i~ 174 (345)
T cd01368 107 QGSPGDGGILPRSLDVIFNSIGG-------YSVFV-----SYVEIYNNYIYDLLEDSPSSTKKRQSLRLREDHNGNMYVA 174 (345)
T ss_pred cCCCCCCchHHHHHHHHHHHHHh-------eeEEE-----EEEEEeCCEeEeCCCCccccccCCCceEEEECCCCCEEec
Confidence 48889999999999999999876 88888 99999999999999
Q ss_pred ---------------------------HHhcccCCCCcceEEEEEEEEeeecCCC----CCcceeEeeeeeeeccCCccc
Q psy12523 55 ---------------------------MIYGLKASNSTHAVFSVVLTQTLVDTKS----GVEGEKVARLSLVDLAGSERA 103 (544)
Q Consensus 55 ---------------------------~~~~n~~ssrSH~i~~i~~~~~~~~~~~----~~~~~~~s~l~lvDLAGSEr~ 103 (544)
.+..|..|||||+||+|+|.+......+ .......|+|+|||||||||.
T Consensus 175 gl~~~~v~s~~e~~~~l~~g~~~R~~~~t~~N~~SSRSH~i~~i~v~~~~~~~~~~~~~~~~~~~~s~l~~VDLAGsEr~ 254 (345)
T cd01368 175 GLTEVEVSSTEEAREVFKRGQKNRRVAGTKLNRESSRSHSVFTIKLVQAPGDSDGDVDQDKDQITVSQLSLVDLAGSERT 254 (345)
T ss_pred CCEEEEeCCHHHHHHHHHHhhccceeccccCcCCCCCceEEEEEEEEEeccCcccccccCCCceEEEEEEEEeccccccc
Confidence 2223445999999999999987654311 235678999999999999999
Q ss_pred cccCcccccccccccchhhhhcccccceeeeec
Q psy12523 104 VKTGAVGERLKEGSNINKQEALESMGISVQASG 136 (544)
Q Consensus 104 ~~~~~~g~~~~e~~~in~~~~l~g~~~~i~a~g 136 (544)
.++++.|++++|+.+||+ +|..++.||.++.
T Consensus 255 ~~~~~~g~~~~E~~~IN~--SL~aL~~vi~aL~ 285 (345)
T cd01368 255 SRTQNTGERLKEAGNINT--SLMTLGKCIEVLR 285 (345)
T ss_pred ccccccchhhhhhhhhhH--HHHHHHHHHHHHH
Confidence 999999999999999999 6666666665543
No 42
>KOG0247|consensus
Probab=99.93 E-value=7.1e-27 Score=245.82 Aligned_cols=140 Identities=29% Similarity=0.392 Sum_probs=117.2
Q ss_pred CCCCCCCCchHHHHHHHHHHHHhccCCCe---------------------------------------------------
Q psy12523 1 MGSQDNKGIIPRLCDSLFDLIAKQESSEL--------------------------------------------------- 29 (544)
Q Consensus 1 ~G~~~~~Giipr~~~~lF~~i~~~~~~~~--------------------------------------------------- 29 (544)
.|+++++||+||+++-||..|....-+.+
T Consensus 133 ~G~~~~~GIlPR~Ld~iF~siq~~~~~k~~~kp~~s~~~e~~~~~~alL~lkr~~~~nd~~~ts~~~~~~~~e~~e~~~~ 212 (809)
T KOG0247|consen 133 TGTPDRPGILPRALDVIFNSIQGRQAKKPVFKPLRSNLFEIKAEEDALLQLKREAMLNDRKSTSKAHRQSTPEYAEHIHV 212 (809)
T ss_pred ecCCCCCCchHHHHHHHHHHhhceeccCceeccccchHHHHHHHHHHHHhhhhhhccccccCcchhhccccHHHHhhcch
Confidence 38999999999999999998875332111
Q ss_pred -eE------eeeEeecccccceeehhhhhhHH------------------------------------------------
Q psy12523 30 -TY------NPYIRTPIRKYEMIYSCRVSMLK------------------------------------------------ 54 (544)
Q Consensus 30 -~y------~~~v~~l~~~~~eiy~e~~~dll------------------------------------------------ 54 (544)
.| ...++.+|.||+|||||.|+|||
T Consensus 213 ~e~~~~~l~~d~~ysV~VSf~EIYN~~iYDLLe~~s~q~~~~~~~ll~~d~~~~~~Vkgl~~V~VssseEA~~l~~lGqk 292 (809)
T KOG0247|consen 213 IEQPALELDEDIVYSVFVSFVEIYNNYIYDLLEDASFQGKLQKLKLLREDTNGNMYVKGLTEVEVSSSEEALELFQLGQK 292 (809)
T ss_pred hcccccccCcCcEEEEEeeHHHHHHHHHHHhhccccccchhhhhhhhhhccCCCeeeccccEEEeccHHHHHHHHHHHHh
Confidence 01 12233345599999999999999
Q ss_pred -----HHhcccCCCCcceEEEEEEEEeeecCCCCCcceeEeeeeeeeccCCccccccCcccccccccccchhhhhccccc
Q psy12523 55 -----MIYGLKASNSTHAVFSVVLTQTLVDTKSGVEGEKVARLSLVDLAGSERAVKTGAVGERLKEGSNINKQEALESMG 129 (544)
Q Consensus 55 -----~~~~n~~ssrSH~i~~i~~~~~~~~~~~~~~~~~~s~l~lvDLAGSEr~~~~~~~g~~~~e~~~in~~~~l~g~~ 129 (544)
.|..|.+|||||+||+|.|.+.+.+ .+...+.+|.|+|||||||||..+|+++|.||+||++||. +|+.++
T Consensus 293 ~r~~asT~lN~~SSRSHsVFtIkl~q~~~~--~~s~~i~vSqlsLvDLAGSERt~rtq~sG~RLrEagNINt--SLmTLg 368 (809)
T KOG0247|consen 293 RRRVASTKLNANSSRSHSVFTIKLVQAPRS--QDSNQITVSQLSLVDLAGSERTNRTQNSGERLREAGNINT--SLMTLR 368 (809)
T ss_pred hhhhhheeccccccccceeEEEEeeecccc--cccCceeEEeeeeeecccchhcccccchhHHHHhhccccH--HHHHHH
Confidence 4556777999999999999999877 3557889999999999999999999999999999999999 888899
Q ss_pred ceeeeeccccccccc
Q psy12523 130 ISVQASGIKVEKNKY 144 (544)
Q Consensus 130 ~~i~a~g~~~sgkt~ 144 (544)
.||-++.....+|+.
T Consensus 369 ~Cie~LR~nqk~ks~ 383 (809)
T KOG0247|consen 369 RCIDVLRENQKSKSQ 383 (809)
T ss_pred HHHHHHHHHhhhhcc
Confidence 999999888777776
No 43
>cd01376 KISc_KID_like Kinesin motor domain, KIF22/Kid-like subgroup. Members of this group might play a role in regulating chromosomal movement along microtubules in mitosis. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In most kinesins, the motor domain is found at the N-terminus (N-type). N-type kinesins are (+) end-directed motors, i.e. they transport cargo towards the (+) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain, which repositions the other head domain through
Probab=99.93 E-value=2.5e-26 Score=234.87 Aligned_cols=119 Identities=34% Similarity=0.401 Sum_probs=100.4
Q ss_pred CCCCCCCCchHHHHHHHHHHHHhccCCCeeEeeeEeecccccceeehhhhhhHH--------------------------
Q psy12523 1 MGSQDNKGIIPRLCDSLFDLIAKQESSELTYNPYIRTPIRKYEMIYSCRVSMLK-------------------------- 54 (544)
Q Consensus 1 ~G~~~~~Giipr~~~~lF~~i~~~~~~~~~y~~~v~~l~~~~~eiy~e~~~dll-------------------------- 54 (544)
+|+++++|||||++++||+.+++.. +.|.+++ ||+|||||.++|||
T Consensus 99 ~G~~~~~Glipr~~~~Lf~~~~~~~---~~~~v~~-----S~~EIy~e~v~DLL~~~~~~l~i~~~~~~~~~v~gl~~~~ 170 (319)
T cd01376 99 LGDPNEPGLIPRTLSDLLRMGRKQA---WTGAFSM-----SYYEIYNEKVYDLLEPAKKELPIREDKDGNILIVGLTSKP 170 (319)
T ss_pred eCCcCccchHHHHHHHHHHHHhhcc---ccceEEE-----EEEEEECCEeeEccCCCCCCceEEEcCCCCEEeeCCEEEE
Confidence 4888899999999999999887643 5688899 99999999999999
Q ss_pred ---------------------HHhcccCCCCcceEEEEEEEEeeecCCCCCcceeEeeeeeeeccCCccccccCcccccc
Q psy12523 55 ---------------------MIYGLKASNSTHAVFSVVLTQTLVDTKSGVEGEKVARLSLVDLAGSERAVKTGAVGERL 113 (544)
Q Consensus 55 ---------------------~~~~n~~ssrSH~i~~i~~~~~~~~~~~~~~~~~~s~l~lvDLAGSEr~~~~~~~g~~~ 113 (544)
.+..|..|||||+||+|+|.+... .....|+|+|||||||||..+++..|.++
T Consensus 171 v~s~~e~~~~l~~~~~~R~~~~t~~n~~SSRSH~i~~i~v~~~~~------~~~~~s~l~~VDLAGsE~~~~~~~~g~~~ 244 (319)
T cd01376 171 IKSMAEFEEAYIPASKNRTVAATKLNDNSSRSHAVLRIKVTQPAS------NIQLEGKLNLIDLAGSEDNRRTGNEGIRL 244 (319)
T ss_pred eCCHHHHHHHHHHHHhhhccccCcCCCccCCCeEEEEEEEEEECC------CceEEEEEEEEECCCCCcccccCCccchh
Confidence 223455699999999999998743 23789999999999999999999999999
Q ss_pred cccccchhhhhcccccceeeee
Q psy12523 114 KEGSNINKQEALESMGISVQAS 135 (544)
Q Consensus 114 ~e~~~in~~~~l~g~~~~i~a~ 135 (544)
+|+.+||+ ++..++.||.++
T Consensus 245 ~e~~~iN~--Sl~~L~~vi~aL 264 (319)
T cd01376 245 KESAAINS--SLFVLSKVVDAL 264 (319)
T ss_pred hhhhhhhh--hHHHHHHHHHHH
Confidence 99999999 555555555443
No 44
>cd01367 KISc_KIF2_like Kinesin motor domain, KIF2-like group. KIF2 is a protein expressed in neurons, which has been associated with axonal transport and neuron development; alternative splice forms have been implicated in lysosomal translocation. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In this subgroup the motor domain is found in the middle (M-type) of the protein chain. M-type kinesins are (+) end-directed motors, i.e. they transport cargo towards the (+) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second (KIF2 may be slower). To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and lo
Probab=99.93 E-value=4.4e-26 Score=233.18 Aligned_cols=119 Identities=25% Similarity=0.411 Sum_probs=101.5
Q ss_pred CCCCCCCCchHHHHHHHHHHHHhccCCCeeEeeeEeecccccceeehhhhhhHH--------------------------
Q psy12523 1 MGSQDNKGIIPRLCDSLFDLIAKQESSELTYNPYIRTPIRKYEMIYSCRVSMLK-------------------------- 54 (544)
Q Consensus 1 ~G~~~~~Giipr~~~~lF~~i~~~~~~~~~y~~~v~~l~~~~~eiy~e~~~dll-------------------------- 54 (544)
+|+++++|||||++++||+.+++.. ..|.+++ ||+|||||.++|||
T Consensus 103 ~G~~~~~Glipr~~~~lf~~~~~~~---~~~~v~~-----S~~EIy~e~v~DLL~~~~~l~i~~~~~~~~~v~~l~~~~v 174 (322)
T cd01367 103 LGDENQEGLYALAARDIFRLLAQPN---DDLGVTV-----SFFEIYGGKLFDLLNDRKRLSVLEDGKGNVQIVGLTEKPV 174 (322)
T ss_pred cCcCCcCccHHHHHHHHHHHHhccc---cccEEEE-----EEEeeecCchhhhccCccceeEEEcCCCCEEeCCCEEEEe
Confidence 5888999999999999999998755 5688899 99999999999999
Q ss_pred --------------------HHhcccCCCCcceEEEEEEEEeeecCCCCCcceeEeeeeeeeccCCccccccC-cccccc
Q psy12523 55 --------------------MIYGLKASNSTHAVFSVVLTQTLVDTKSGVEGEKVARLSLVDLAGSERAVKTG-AVGERL 113 (544)
Q Consensus 55 --------------------~~~~n~~ssrSH~i~~i~~~~~~~~~~~~~~~~~~s~l~lvDLAGSEr~~~~~-~~g~~~ 113 (544)
.+..|..|||||+||+|+|.+... ....|+|+|||||||||..+++ ..|+++
T Consensus 175 ~s~~e~~~~l~~g~~~R~~~~t~~n~~SSRSH~i~~i~v~~~~~-------~~~~s~l~~vDLAGsE~~~~~~~~~~~~~ 247 (322)
T cd01367 175 TSVDELLELIESGNSLRTTGSTGANDQSSRSHAILQIILKNKKL-------NKLLGKLSFIDLAGSERGADTSEHDRQTR 247 (322)
T ss_pred CCHHHHHHHHHHHhcccccccCcCCCCcccceEEEEEEEEEecC-------CeeEEEEEEeecCCccccccccccchhhH
Confidence 333466699999999999998743 4678999999999999999875 579999
Q ss_pred cccccchhhhhcccccceeeeec
Q psy12523 114 KEGSNINKQEALESMGISVQASG 136 (544)
Q Consensus 114 ~e~~~in~~~~l~g~~~~i~a~g 136 (544)
+|+.+||+ ++..++.||.+..
T Consensus 248 ~e~~~IN~--SL~~L~~vi~al~ 268 (322)
T cd01367 248 KEGAEINK--SLLALKECIRALA 268 (322)
T ss_pred HhHhHHhH--HHHHHHHHHHHHh
Confidence 99999999 7776666665554
No 45
>cd01365 KISc_KIF1A_KIF1B Kinesin motor domain, KIF1_like proteins. KIF1A (Unc104) transports synaptic vesicles to the nerve terminal, KIF1B has been implicated in transport of mitochondria. Both proteins are expressed in neurons. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In most kinesins, the motor domain is found at the N-terminus (N-type). N-type kinesins are (+) end-directed motors, i.e. they transport cargo towards the (+) end of the microtubule. In contrast to the majority of dimeric kinesins, most KIF1A/Unc104 kinesins are monomeric motors. A lysine-rich loop in KIF1A binds to the negatively charged C-terminus of tubulin and compensates for the lack of a second motor domain, allowing KIF1A to move processively.
Probab=99.89 E-value=5.9e-24 Score=220.65 Aligned_cols=131 Identities=47% Similarity=0.711 Sum_probs=113.8
Q ss_pred CCCCCCCCchHHHHHHHHHHHHhccCCCeeEeeeEeecccccceeehhhhhhHH--------------------------
Q psy12523 1 MGSQDNKGIIPRLCDSLFDLIAKQESSELTYNPYIRTPIRKYEMIYSCRVSMLK-------------------------- 54 (544)
Q Consensus 1 ~G~~~~~Giipr~~~~lF~~i~~~~~~~~~y~~~v~~l~~~~~eiy~e~~~dll-------------------------- 54 (544)
+|++.++|||||++++||+.++...+....|.+++ ||+|||||.++|||
T Consensus 107 ~G~~~~~Gli~r~~~~Lf~~~~~~~~~~~~~~v~~-----S~~EIy~e~v~DLL~~~~~~~~~l~i~~~~~~g~~v~gl~ 181 (356)
T cd01365 107 MGYKEEKGIIPRLCEELFQRIESKKEQNLSYEVEV-----SYMEIYNEKVRDLLNPKKKNKGNLKVREHPVLGPYVEDLS 181 (356)
T ss_pred cCCCCCCchHHHHHHHHHHHHhhccccCceEEEEE-----EEEEEECCeeeeCCCCCccCCcCceEEECCCCCEEeCCCE
Confidence 58888999999999999999998877778899999 99999999999999
Q ss_pred ------------------------HHhcccCCCCcceEEEEEEEEeeecCCCCCcceeEeeeeeeeccCCccccccCccc
Q psy12523 55 ------------------------MIYGLKASNSTHAVFSVVLTQTLVDTKSGVEGEKVARLSLVDLAGSERAVKTGAVG 110 (544)
Q Consensus 55 ------------------------~~~~n~~ssrSH~i~~i~~~~~~~~~~~~~~~~~~s~l~lvDLAGSEr~~~~~~~g 110 (544)
.+..|..|||||+||+|+|.+...+...+......|+|+|||||||||..+++..|
T Consensus 182 ~~~v~s~~e~~~~l~~g~~~R~~~~t~~n~~SSRSH~i~~l~v~~~~~~~~~~~~~~~~s~l~~VDLAGsEr~~~~~~~~ 261 (356)
T cd01365 182 KVAVTSYEDIQNLLEEGNKSRTTASTNMNDTSSRSHAVFTIVLTQKKLDKETDLTTEKVSKISLVDLAGSERASSTGAEG 261 (356)
T ss_pred EEEeCCHHHHHHHHHHHHhcccccCCCCCCCcCCceEEEEEEEEEEecccCCCCCceEEEEEEeeecccccccccccccc
Confidence 22335559999999999999986664334567889999999999999999999999
Q ss_pred ccccccccchhhhhcccccceeeeeccc
Q psy12523 111 ERLKEGSNINKQEALESMGISVQASGIK 138 (544)
Q Consensus 111 ~~~~e~~~in~~~~l~g~~~~i~a~g~~ 138 (544)
++++|+.+||+ ++..++.||.++...
T Consensus 262 ~~~~E~~~IN~--SL~aL~~vi~~l~~~ 287 (356)
T cd01365 262 DRLKEGSNINK--SLTTLGKVISALADN 287 (356)
T ss_pred hhhHHHHHHhH--HHHHHHHHHHHHHhc
Confidence 99999999999 777777777776543
No 46
>cd01371 KISc_KIF3 Kinesin motor domain, kinesins II or KIF3_like proteins. Subgroup of kinesins, which form heterotrimers composed of 2 kinesins and one non-motor accessory subunit. Kinesins II play important roles in ciliary transport, and have been implicated in neuronal transport, melanosome transport, the secretory pathway, and mitosis. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In this group the motor domain is found at the N-terminus (N-type). N-type kinesins are (+) end-directed motors, i.e. they transport cargo towards the (+) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain
Probab=99.87 E-value=7.2e-23 Score=210.59 Aligned_cols=126 Identities=35% Similarity=0.512 Sum_probs=107.9
Q ss_pred CCCCC---CCCchHHHHHHHHHHHHhccCCCeeEeeeEeecccccceeehhhhhhHH-----------------------
Q psy12523 1 MGSQD---NKGIIPRLCDSLFDLIAKQESSELTYNPYIRTPIRKYEMIYSCRVSMLK----------------------- 54 (544)
Q Consensus 1 ~G~~~---~~Giipr~~~~lF~~i~~~~~~~~~y~~~v~~l~~~~~eiy~e~~~dll----------------------- 54 (544)
+|.++ ++|||||++++||+.+++..+ ..|.+++ +|+|||||.++|||
T Consensus 100 ~G~~~~~~~~Glipr~~~~Lf~~~~~~~~--~~~~v~~-----S~~Eiy~e~v~DLL~~~~~~~l~i~~~~~~~~~v~~l 172 (333)
T cd01371 100 EGVREPPELRGIIPNSFAHIFGHIAKAEN--VQFLVRV-----SYLEIYNEEVRDLLGKDQKKKLELKERPDRGVYVKDL 172 (333)
T ss_pred cCCCCcccccchHHHHHHHHHHHHhhccC--ccEEEEE-----EEEEeeCCeeeeCCCCCCCCceeEEEcCCCCEEeCCC
Confidence 36555 899999999999999987665 5688899 99999999999999
Q ss_pred -------------------------HHhcccCCCCcceEEEEEEEEeeecCCCCCcceeEeeeeeeeccCCccccccCcc
Q psy12523 55 -------------------------MIYGLKASNSTHAVFSVVLTQTLVDTKSGVEGEKVARLSLVDLAGSERAVKTGAV 109 (544)
Q Consensus 55 -------------------------~~~~n~~ssrSH~i~~i~~~~~~~~~~~~~~~~~~s~l~lvDLAGSEr~~~~~~~ 109 (544)
.+..|..|||||+||+|+|++..... .+......|+|+|||||||||..+++..
T Consensus 173 ~~~~v~s~~~~~~~l~~g~~~R~~~~t~~n~~ssRSH~i~~i~v~~~~~~~-~~~~~~~~s~L~~VDLAGsEr~~~~~~~ 251 (333)
T cd01371 173 SMFVVKNAEEMDKLMTLGNKNRSVGATNMNEDSSRSHSIFTITIECSEKGE-DGENHIRVGKLNLVDLAGSERQSKTGAT 251 (333)
T ss_pred EEEEeCCHHHHHHHHHHHHhhCccccccccCCCCCCcEEEEEEEEEEeccC-CCCCcEEEEEEEEEECCCCCcccccCCc
Confidence 23345569999999999999875543 3446678999999999999999999999
Q ss_pred cccccccccchhhhhcccccceeeeec
Q psy12523 110 GERLKEGSNINKQEALESMGISVQASG 136 (544)
Q Consensus 110 g~~~~e~~~in~~~~l~g~~~~i~a~g 136 (544)
|++++|+..||+ +|..++.||.++.
T Consensus 252 ~~~~~E~~~iN~--sL~~L~~vi~al~ 276 (333)
T cd01371 252 GDRLKEATKINL--SLSALGNVISALV 276 (333)
T ss_pred hhhhHhHhhhhh--HHHHHHHHHHHHH
Confidence 999999999999 8888888887765
No 47
>COG5059 KIP1 Kinesin-like protein [Cytoskeleton]
Probab=99.87 E-value=1.5e-22 Score=220.14 Aligned_cols=126 Identities=35% Similarity=0.491 Sum_probs=108.9
Q ss_pred CCCCCCCCchHHHHHHHHHHHHhccCCCeeEeeeEeecccccceeehhhhhhHH--------------------------
Q psy12523 1 MGSQDNKGIIPRLCDSLFDLIAKQESSELTYNPYIRTPIRKYEMIYSCRVSMLK-------------------------- 54 (544)
Q Consensus 1 ~G~~~~~Giipr~~~~lF~~i~~~~~~~~~y~~~v~~l~~~~~eiy~e~~~dll-------------------------- 54 (544)
.|..+++||||+++++||+.++.... +.+|.+.+ +|+|||||.++|||
T Consensus 108 ~G~~~~~Gii~~~l~~lf~~l~~~~~-~~~~~v~i-----s~lEiYnEk~~DLl~~~~~~~~~~~~~~~~v~v~~l~~~~ 181 (568)
T COG5059 108 SGTEEEPGIIPLSLKELFSKLEDLSM-TKDFAVSI-----SYLEIYNEKIYDLLSPNEESLNIREDSLLGVKVAGLTEKH 181 (568)
T ss_pred ecCccccchHHHHHHHHHHHHHhccc-CcceeeEe-----ehhHHHhhHHHhhccCccccccccccCCCceEeecceEEe
Confidence 47778999999999999999988765 56788888 99999999999999
Q ss_pred ---------------------HHhcccCCCCcceEEEEEEEEeeecCCCCCcceeEeeeeeeeccCCccccccCcccccc
Q psy12523 55 ---------------------MIYGLKASNSTHAVFSVVLTQTLVDTKSGVEGEKVARLSLVDLAGSERAVKTGAVGERL 113 (544)
Q Consensus 55 ---------------------~~~~n~~ssrSH~i~~i~~~~~~~~~~~~~~~~~~s~l~lvDLAGSEr~~~~~~~g~~~ 113 (544)
.+..|..|||||+||++++.+.+... .....++++|||||||||+..+++.|.|+
T Consensus 182 ~~s~ee~l~~l~~~~~nr~~~~te~n~~ssRshsi~~i~~~~~~~~~----~~~~~~~l~lvDLagSE~~~~~~~~~~r~ 257 (568)
T COG5059 182 VSSKEEILDLLRKGEKNRTTASTEINDESSRSHSIFQIELASKNKVS----GTSETSKLSLVDLAGSERAARTGNRGTRL 257 (568)
T ss_pred cCChHHHHHHHHHhhhhcccccchhccccccceEEEEEEEEEeccCc----cceecceEEEEeeccccccchhhcccchh
Confidence 34445569999999999999997665 44555899999999999999999999999
Q ss_pred cccccchhhhhcccccceeeeeccc
Q psy12523 114 KEGSNINKQEALESMGISVQASGIK 138 (544)
Q Consensus 114 ~e~~~in~~~~l~g~~~~i~a~g~~ 138 (544)
+||..||+ +|+.++.||-+++..
T Consensus 258 ~E~~~iN~--sLl~Lg~vI~~L~~~ 280 (568)
T COG5059 258 KEGASINK--SLLTLGNVINALGDK 280 (568)
T ss_pred hhhhhhHh--hHHHHHHHHHHHhcc
Confidence 99999999 888777777776643
No 48
>cd01374 KISc_CENP_E Kinesin motor domain, CENP-E/KIP2-like subgroup, involved in chromosome movement and/or spindle elongation during mitosis. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In most kinesins, the motor domain is found at the N-terminus (N-type). N-type kinesins are (+) end-directed motors, i.e. they transport cargo towards the (+) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain, which repositions the other head domain through the coiled-coil domain close to
Probab=99.87 E-value=1.4e-22 Score=207.54 Aligned_cols=128 Identities=31% Similarity=0.429 Sum_probs=109.4
Q ss_pred CCCCCCCCchHHHHHHHHHHHHhccCCCeeEeeeEeecccccceeehhhhhhHH--------------------------
Q psy12523 1 MGSQDNKGIIPRLCDSLFDLIAKQESSELTYNPYIRTPIRKYEMIYSCRVSMLK-------------------------- 54 (544)
Q Consensus 1 ~G~~~~~Giipr~~~~lF~~i~~~~~~~~~y~~~v~~l~~~~~eiy~e~~~dll-------------------------- 54 (544)
+|+++++|||||++++||+.+.+..+ ..|.+++ +|+|||||.++|||
T Consensus 92 ~G~~~~~Gli~r~~~~lf~~~~~~~~--~~~~v~~-----S~~Eiy~e~v~DLL~~~~~~l~i~~~~~~~~~v~gl~~~~ 164 (321)
T cd01374 92 SGDEQEPGIIPLAVRDIFQRIQDTPD--REFLLRV-----SYLEIYNEKIKDLLSPSPQELRIREDPNKGVVVAGLTEEI 164 (321)
T ss_pred cCCCCCCchHHHHHHHHHHHHhcccC--ceEEEEE-----EEEEEEcCEeEEccCCCCCCceEEECCCCCEEeCCceEEE
Confidence 47788999999999999999987663 4678888 99999999999999
Q ss_pred ---------------------HHhcccCCCCcceEEEEEEEEeeecCCCCCcceeEeeeeeeeccCCccccccCcccccc
Q psy12523 55 ---------------------MIYGLKASNSTHAVFSVVLTQTLVDTKSGVEGEKVARLSLVDLAGSERAVKTGAVGERL 113 (544)
Q Consensus 55 ---------------------~~~~n~~ssrSH~i~~i~~~~~~~~~~~~~~~~~~s~l~lvDLAGSEr~~~~~~~g~~~ 113 (544)
.+..|..|||||+||+|+|.+..... .+......|+|+|||||||||..+.+ .|+++
T Consensus 165 v~s~~e~~~~l~~~~~~R~~~~t~~n~~ssRSH~i~~i~v~~~~~~~-~~~~~~~~s~l~~vDLAGsE~~~~~~-~~~~~ 242 (321)
T cd01374 165 VTSPEHLLQLIARGEKNRHVGETDFNERSSRSHTIFQLTIESRERGD-SESGTVRVSTLNLIDLAGSERASQTG-AGERR 242 (321)
T ss_pred eCCHHHHHHHHHHHHhccccccCcCCCccccccEEEEEEEEEEecCC-CCCCcEEEEEEEEEECCCCCccccCC-CCccc
Confidence 23345569999999999999986543 23467889999999999999999999 99999
Q ss_pred cccccchhhhhcccccceeeeecccc
Q psy12523 114 KEGSNINKQEALESMGISVQASGIKV 139 (544)
Q Consensus 114 ~e~~~in~~~~l~g~~~~i~a~g~~~ 139 (544)
+|+.+||+ ++..++.||.+.....
T Consensus 243 ~e~~~iN~--Sl~~L~~vi~al~~~~ 266 (321)
T cd01374 243 KEGSFINK--SLLTLGTVISKLSEGK 266 (321)
T ss_pred cccchhhh--HHHHHHHHHHHHHhcC
Confidence 99999999 8888888888877543
No 49
>cd01366 KISc_C_terminal Kinesin motor domain, KIFC2/KIFC3/ncd-like carboxy-terminal kinesins. Ncd is a spindle motor protein necessary for chromosome segregation in meiosis. KIFC2/KIFC3-like kinesins have been implicated in motility of the Golgi apparatus as well as dentritic and axonal transport in neurons. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In this subgroup the motor domain is found at the C-terminus (C-type). C-type kinesins are (-) end-directed motors, i.e. they transport cargo towards the (-) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for mi
Probab=99.86 E-value=2.3e-22 Score=206.91 Aligned_cols=127 Identities=35% Similarity=0.476 Sum_probs=112.3
Q ss_pred CCCCCCCCchHHHHHHHHHHHHhccCCCeeEeeeEeecccccceeehhhhhhHH--------------------------
Q psy12523 1 MGSQDNKGIIPRLCDSLFDLIAKQESSELTYNPYIRTPIRKYEMIYSCRVSMLK-------------------------- 54 (544)
Q Consensus 1 ~G~~~~~Giipr~~~~lF~~i~~~~~~~~~y~~~v~~l~~~~~eiy~e~~~dll-------------------------- 54 (544)
+|+++++|||||++++||+.++...+..+.|.+++ +|+|||||.++|||
T Consensus 96 ~G~~~~~Gli~r~~~~lf~~~~~~~~~~~~~~v~~-----S~~EIy~e~v~DLL~~~~~~~~~l~i~~~~~~~~~i~~l~ 170 (329)
T cd01366 96 EGPPENPGIIPRALEQLFNTAEELKEKGWSYTITA-----SMLEIYNETIRDLLATKPAPKKKLEIKHDSKGETYVTNLT 170 (329)
T ss_pred cCCCCCCCcHHHHHHHHHHHHHhhhccCceEEEEE-----EEEEEECCEeEECCCCCcCCCCceEEEECCCCCEEecCCE
Confidence 47788999999999999999999887788899999 99999999999999
Q ss_pred ------------------------HHhcccCCCCcceEEEEEEEEeeecCCCCCcceeEeeeeeeeccCCccccccCccc
Q psy12523 55 ------------------------MIYGLKASNSTHAVFSVVLTQTLVDTKSGVEGEKVARLSLVDLAGSERAVKTGAVG 110 (544)
Q Consensus 55 ------------------------~~~~n~~ssrSH~i~~i~~~~~~~~~~~~~~~~~~s~l~lvDLAGSEr~~~~~~~g 110 (544)
.+..|..|||||+||+|+|.+.... .+....|+|+|||||||||..++++.|
T Consensus 171 ~~~v~s~~e~~~~l~~~~~~R~~~~t~~n~~sSRsH~i~~i~v~~~~~~----~~~~~~s~l~~VDLaGsE~~~~~~~~~ 246 (329)
T cd01366 171 EVPVSSPEEVTRLLNLGSKNRSVASTNMNEHSSRSHAVFQLKIRGTNLQ----TGEQTRGKLNLVDLAGSERLKKSGATG 246 (329)
T ss_pred EEEeCCHHHHHHHHHHHHhhcccccccccCCCCCccEEEEEEEEEEcCC----CCcEEEEEEEEEECCCCcccccccccc
Confidence 2223444999999999999987544 367789999999999999999999999
Q ss_pred ccccccccchhhhhcccccceeeeeccc
Q psy12523 111 ERLKEGSNINKQEALESMGISVQASGIK 138 (544)
Q Consensus 111 ~~~~e~~~in~~~~l~g~~~~i~a~g~~ 138 (544)
.+++|+..||+ ++..++.||.+....
T Consensus 247 ~~~~e~~~in~--Sl~~L~~vl~~l~~~ 272 (329)
T cd01366 247 DRLKEAQAINK--SLSALGDVISALRSK 272 (329)
T ss_pred hhhHhHhhhhh--HHHHHHHHHHHHhcC
Confidence 99999999999 888888888888754
No 50
>cd01369 KISc_KHC_KIF5 Kinesin motor domain, kinesin heavy chain (KHC) or KIF5-like subgroup. Members of this group have been associated with organelle transport. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In most kinesins, the motor domain is found at the N-terminus (N-type). N-type kinesins are (+) end-directed motors, i.e. they transport cargo towards the (+) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain, which repositions the other head domain through the coiled-c
Probab=99.86 E-value=2.8e-22 Score=205.80 Aligned_cols=125 Identities=35% Similarity=0.527 Sum_probs=107.8
Q ss_pred CCCCC---CCCchHHHHHHHHHHHHhccCCCeeEeeeEeecccccceeehhhhhhHH-----------------------
Q psy12523 1 MGSQD---NKGIIPRLCDSLFDLIAKQESSELTYNPYIRTPIRKYEMIYSCRVSMLK----------------------- 54 (544)
Q Consensus 1 ~G~~~---~~Giipr~~~~lF~~i~~~~~~~~~y~~~v~~l~~~~~eiy~e~~~dll----------------------- 54 (544)
+|.+. ++|||||++++||+++.... .+..|.+++ +|+|||||.++|||
T Consensus 95 ~G~~~~~~~~Giipr~~~~Lf~~~~~~~-~~~~~~v~~-----S~~EIy~e~v~DLL~~~~~~l~i~~~~~~~~~v~gl~ 168 (325)
T cd01369 95 EGPPGDPELKGIIPRIVHDIFEHISSMD-ENLEFHVKV-----SYLEIYMEKIRDLLDVSKDNLQVHEDKNRGVYVKGLT 168 (325)
T ss_pred cCCCCccccCChHHHHHHHHHHHHhhcc-CCceEEEEE-----EEEEEECCChhhcccCccCCceEEEcCCCCEEEcCCE
Confidence 35555 89999999999999998763 466799999 99999999999998
Q ss_pred ------------------------HHhcccCCCCcceEEEEEEEEeeecCCCCCcceeEeeeeeeeccCCccccccCccc
Q psy12523 55 ------------------------MIYGLKASNSTHAVFSVVLTQTLVDTKSGVEGEKVARLSLVDLAGSERAVKTGAVG 110 (544)
Q Consensus 55 ------------------------~~~~n~~ssrSH~i~~i~~~~~~~~~~~~~~~~~~s~l~lvDLAGSEr~~~~~~~g 110 (544)
.+..|..|||||+||+|+|.+..... .....|+|+|||||||||..++++.|
T Consensus 169 ~~~v~s~~e~~~~i~~~~~~R~~~~t~~n~~ssRSH~i~~i~v~~~~~~~----~~~~~s~l~~VDLAGsE~~~~~~~~~ 244 (325)
T cd01369 169 ERFVSSPEEVLEVINEGKSNRAVASTNMNEESSRSHSIFLITLKQENVET----GSKKRGKLFLVDLAGSEKVSKTGAEG 244 (325)
T ss_pred EEEcCCHHHHHHHHHHHHhhcccccCcCCCccccccEEEEEEEEEEecCC----CCEEEEEEEEEECCCCCcccccCCcc
Confidence 23345569999999999999875443 56789999999999999999999999
Q ss_pred ccccccccchhhhhcccccceeeeecc
Q psy12523 111 ERLKEGSNINKQEALESMGISVQASGI 137 (544)
Q Consensus 111 ~~~~e~~~in~~~~l~g~~~~i~a~g~ 137 (544)
++++|+..||+ ++..++.||.++..
T Consensus 245 ~~~~e~~~in~--sl~~L~~vi~aL~~ 269 (325)
T cd01369 245 QTLEEAKKINK--SLSALGNVINALTD 269 (325)
T ss_pred hhHHHHHHHhH--HHHHHHHHHHHHHc
Confidence 99999999999 78888888888764
No 51
>cd01375 KISc_KIF9_like Kinesin motor domain, KIF9-like subgroup; might play a role in cell shape remodeling. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In most kinesins, the motor domain is found at the N-terminus (N-type). N-type kinesins are (+) end-directed motors, i.e. they transport cargo towards the (+) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain, which repositions the other head domain through the coiled-coil domain close to a second tubulin dimer, about 80
Probab=99.86 E-value=3.4e-22 Score=205.58 Aligned_cols=124 Identities=34% Similarity=0.490 Sum_probs=106.0
Q ss_pred CCCCchHHHHHHHHHHHHhccCCCeeEeeeEeecccccceeehhhhhhHH------------------------------
Q psy12523 5 DNKGIIPRLCDSLFDLIAKQESSELTYNPYIRTPIRKYEMIYSCRVSMLK------------------------------ 54 (544)
Q Consensus 5 ~~~Giipr~~~~lF~~i~~~~~~~~~y~~~v~~l~~~~~eiy~e~~~dll------------------------------ 54 (544)
.++|||||++++||++|++..+ ..|.+++ +|+|||||.++|||
T Consensus 106 ~~~Glipr~~~~lf~~~~~~~~--~~~~v~~-----S~~Eiy~e~v~DLL~~~~~~~~~~~~l~i~e~~~~~~~v~gl~~ 178 (334)
T cd01375 106 KDRGLIPRALEQVFREVAMRAT--KTYTVHV-----SYLEIYNEQLYDLLGDTPEALESLPAVTILEDSEQNIHVKGLSL 178 (334)
T ss_pred cCCchHHHHHHHHHHHHHhccC--cceEEEE-----EEEEEECCEeecCCCCCccccccCCceEEEEcCCCCEEeCCcEE
Confidence 4789999999999999987654 5688999 99999999999999
Q ss_pred -----------------------HHhcccCCCCcceEEEEEEEEeeecCCCCCcceeEeeeeeeeccCCccccccCcccc
Q psy12523 55 -----------------------MIYGLKASNSTHAVFSVVLTQTLVDTKSGVEGEKVARLSLVDLAGSERAVKTGAVGE 111 (544)
Q Consensus 55 -----------------------~~~~n~~ssrSH~i~~i~~~~~~~~~~~~~~~~~~s~l~lvDLAGSEr~~~~~~~g~ 111 (544)
.+..|..|||||+||+|+|.+..... +......|+|+|||||||||..++++.|.
T Consensus 179 ~~v~s~~e~~~~~~~g~~~R~~~~t~~n~~sSRSH~i~~l~v~~~~~~~--~~~~~~~s~l~~VDLAGsEr~~~~~~~~~ 256 (334)
T cd01375 179 HSATTEEEALNLLFLGETNRTIAETSMNQASSRSHCIFTIHLESRSREA--GSEVVRLSKLNLVDLAGSERVSKTGVSGQ 256 (334)
T ss_pred EEeCCHHHHHHHHHHHHhhcccccCcCcCCcCcCeEEEEEEEEEEecCC--CCCceEEEEEEEEECCCCCccccccCchh
Confidence 12334559999999999999985442 34567899999999999999999999999
Q ss_pred cccccccchhhhhcccccceeeeecccc
Q psy12523 112 RLKEGSNINKQEALESMGISVQASGIKV 139 (544)
Q Consensus 112 ~~~e~~~in~~~~l~g~~~~i~a~g~~~ 139 (544)
+++|+.+||+ +|..++.||.+++...
T Consensus 257 ~~~e~~~iN~--SL~~L~~vi~~l~~~~ 282 (334)
T cd01375 257 VLKEAKYINK--SLSFLEQVINALSEKA 282 (334)
T ss_pred hhhhhhhhhh--hHHHHHHHHHHHHhCC
Confidence 9999999999 8888888888877543
No 52
>cd01372 KISc_KIF4 Kinesin motor domain, KIF4-like subfamily. Members of this group seem to perform a variety of functions, and have been implicated in neuronal organelle transport and chromosome segregation during mitosis. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In most kinesins, the motor domain is found at the N-terminus (N-type). N-type kinesins are (+) end-directed motors, i.e. they transport cargo towards the (+) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain,
Probab=99.85 E-value=6.3e-22 Score=204.66 Aligned_cols=128 Identities=33% Similarity=0.488 Sum_probs=107.9
Q ss_pred CCCCCchHHHHHHHHHHHHhccCCCeeEeeeEeecccccceeehhhhhhHH-----------------------------
Q psy12523 4 QDNKGIIPRLCDSLFDLIAKQESSELTYNPYIRTPIRKYEMIYSCRVSMLK----------------------------- 54 (544)
Q Consensus 4 ~~~~Giipr~~~~lF~~i~~~~~~~~~y~~~v~~l~~~~~eiy~e~~~dll----------------------------- 54 (544)
.+++|||||++++||+.+++..+ +..|.+.+ +|+|||||.++|||
T Consensus 101 ~~~~Giipr~~~~LF~~~~~~~~-~~~~~v~v-----S~~EIy~e~v~DLL~~~~~~~~~l~i~e~~~~~~~i~gl~~~~ 174 (341)
T cd01372 101 EEEVGIIPRAIQHIFKKIDEKKD-EPDFQLKV-----SFLELYNEEVRDLLSPSTSEKSPIQIREDSKGNIIIVGLTEVT 174 (341)
T ss_pred cccCChHHHHHHHHHHHHHhccc-cceEEEEE-----EEEEeECCeeecCCCCcccCCCCceEEECCCCCEecCCCEEEE
Confidence 35799999999999999987654 46788999 99999999999998
Q ss_pred ---------------------HHhcccCCCCcceEEEEEEEEeeecCC------CCCcceeEeeeeeeeccCCccccccC
Q psy12523 55 ---------------------MIYGLKASNSTHAVFSVVLTQTLVDTK------SGVEGEKVARLSLVDLAGSERAVKTG 107 (544)
Q Consensus 55 ---------------------~~~~n~~ssrSH~i~~i~~~~~~~~~~------~~~~~~~~s~l~lvDLAGSEr~~~~~ 107 (544)
.+..|..|||||+||+|+|.+...... .+......|+|+|||||||||..+++
T Consensus 175 v~s~~e~~~~l~~g~~~R~~~~t~~n~~sSRsH~i~~i~v~~~~~~~~~~~~~~~~~~~~~~s~l~~VDLAGsE~~~~~~ 254 (341)
T cd01372 175 VNSAQEVMSCLEQGSLSRTTASTAMNSQSSRSHAIFTITLEQTRKNGPIAPMSGDDKNSTLTSKFHFVDLAGSERLKKTG 254 (341)
T ss_pred ECCHHHHHHHHHHHHHhcccccccCCCccCcCcEEEEEEEEEEecCCccccccccCCCceeeEEEEEEECCCCccccccc
Confidence 233445599999999999999876411 13356789999999999999999999
Q ss_pred cccccccccccchhhhhcccccceeeeecccc
Q psy12523 108 AVGERLKEGSNINKQEALESMGISVQASGIKV 139 (544)
Q Consensus 108 ~~g~~~~e~~~in~~~~l~g~~~~i~a~g~~~ 139 (544)
+.|++++|+..||+ ++..++.||.+++...
T Consensus 255 ~~~~~~~e~~~in~--sl~aL~~vi~al~~~~ 284 (341)
T cd01372 255 ATGDRLKEGISINS--GLLALGNVISALGDES 284 (341)
T ss_pred CchhHhHHHHHHhH--HHHHHHHHHHHHHhcC
Confidence 99999999999999 7778888888876544
No 53
>cd01364 KISc_BimC_Eg5 Kinesin motor domain, BimC/Eg5 spindle pole proteins, participate in spindle assembly and chromosome segregation during cell division. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In most kinesins, the motor domain is found at the N-terminus (N-type), N-type kinesins are (+) end-directed motors, i.e. they transport cargo towards the (+) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain, which repositions the other head domain through the coiled-coil d
Probab=99.85 E-value=5.2e-22 Score=205.99 Aligned_cols=124 Identities=32% Similarity=0.447 Sum_probs=105.2
Q ss_pred CCCCCchHHHHHHHHHHHHhccCCCeeEeeeEeecccccceeehhhhhhHHH----------------------------
Q psy12523 4 QDNKGIIPRLCDSLFDLIAKQESSELTYNPYIRTPIRKYEMIYSCRVSMLKM---------------------------- 55 (544)
Q Consensus 4 ~~~~Giipr~~~~lF~~i~~~~~~~~~y~~~v~~l~~~~~eiy~e~~~dll~---------------------------- 55 (544)
++++|||||++++||++++.. ...|.+++ +|+|||||.++|||.
T Consensus 114 ~~~~Glipr~~~~Lf~~~~~~---~~~~~v~~-----S~~EIy~e~v~DLL~~~~~~~~~l~i~e~~~~~~g~~v~gl~~ 185 (352)
T cd01364 114 SPHAGIIPRALYQLFEKLESQ---NTEYSVKV-----SYLELYNEELFDLLSSESDLNKPLRIFDDTNNKGGVVIQGLEE 185 (352)
T ss_pred cccCCchHHHHHHHHHHHHhc---cceeEEEE-----EEEEeeCCeeeeCCCCccccCccceEEeccCcCCCEEeCCcEE
Confidence 356899999999999999875 55788999 999999999999992
Q ss_pred ------------------------HhcccCCCCcceEEEEEEEEeeecCCCCCcceeEeeeeeeeccCCccccccCcccc
Q psy12523 56 ------------------------IYGLKASNSTHAVFSVVLTQTLVDTKSGVEGEKVARLSLVDLAGSERAVKTGAVGE 111 (544)
Q Consensus 56 ------------------------~~~n~~ssrSH~i~~i~~~~~~~~~~~~~~~~~~s~l~lvDLAGSEr~~~~~~~g~ 111 (544)
+..|..|||||+||+|+|.+..... .+......|+|+|||||||||..++++.|.
T Consensus 186 ~~v~s~~e~~~~l~~g~~~R~~~~t~~n~~sSRSH~i~~i~i~~~~~~~-~~~~~~~~s~l~~VDLAGsE~~~~~~~~~~ 264 (352)
T cd01364 186 ITVNNANEGLKLLEKGSAKRKTAATLMNDQSSRSHSIFSITIHIKETTI-SGEELVKIGKLNLVDLAGSENIGRSGAENK 264 (352)
T ss_pred EEeCCHHHHHHHHHHHhhhcccccCcCCCCCCCCceEEEEEEEEeccCC-CCCccEEEEEEEEEECCCccccccccCcch
Confidence 1234459999999999999886543 344556789999999999999999999999
Q ss_pred cccccccchhhhhcccccceeeeeccc
Q psy12523 112 RLKEGSNINKQEALESMGISVQASGIK 138 (544)
Q Consensus 112 ~~~e~~~in~~~~l~g~~~~i~a~g~~ 138 (544)
+++|+..||+ +|..++.||.++...
T Consensus 265 ~~~e~~~iN~--SL~~L~~vi~al~~~ 289 (352)
T cd01364 265 RAREAGNINQ--SLLTLGRVINALVEK 289 (352)
T ss_pred hhHHHhhhhH--HHHHHHHHHHHHHcC
Confidence 9999999999 888888888887643
No 54
>KOG0246|consensus
Probab=99.83 E-value=8.1e-21 Score=195.12 Aligned_cols=121 Identities=30% Similarity=0.408 Sum_probs=103.2
Q ss_pred CCCchHHHHHHHHHHHHhccCCCeeEeeeEeecccccceeehhhhhhHH-------------------------------
Q psy12523 6 NKGIIPRLCDSLFDLIAKQESSELTYNPYIRTPIRKYEMIYSCRVSMLK------------------------------- 54 (544)
Q Consensus 6 ~~Giipr~~~~lF~~i~~~~~~~~~y~~~v~~l~~~~~eiy~e~~~dll------------------------------- 54 (544)
..||--.+..|+|..+..-..+.+.+.+++ +|+|||.-.++|||
T Consensus 321 s~giya~aa~Dvf~~L~~p~Y~~~~l~v~~-----tFFEIYgGKvfDLL~~k~KLrvLEDg~QQVqVVGLqE~~v~~~ee 395 (676)
T KOG0246|consen 321 SKGIYALAARDVFRLLRQPTYRKLDLKVYV-----TFFEIYGGKVYDLLNDKKKLRVLEDGNQQVQVVGLQEEEVSGVEE 395 (676)
T ss_pred cccchhhhhhHHHHHhcccchhhcceEEEE-----EEEEEeCcchhhhhccccceEEeecCCceEEEeeceeeeccCHHH
Confidence 459999999999999887777778888888 99999999999999
Q ss_pred ---------------HHhcccCCCCcceEEEEEEEEeeecCCCCCcceeEeeeeeeeccCCcccccc-Cccccccccccc
Q psy12523 55 ---------------MIYGLKASNSTHAVFSVVLTQTLVDTKSGVEGEKVARLSLVDLAGSERAVKT-GAVGERLKEGSN 118 (544)
Q Consensus 55 ---------------~~~~n~~ssrSH~i~~i~~~~~~~~~~~~~~~~~~s~l~lvDLAGSEr~~~~-~~~g~~~~e~~~ 118 (544)
-|..|.+|||||+||.|.+.+.. .....++++||||||+||.+.| .+.-+.-.||+.
T Consensus 396 Vl~lIe~Gns~RtsG~TsANs~SSRSHAvfQIilr~~~-------~~k~hGKfSlIDLAGnERGaDts~adRqtRlEGAE 468 (676)
T KOG0246|consen 396 VLELIEKGNSCRTSGQTSANSNSSRSHAVFQIILRKHG-------EFKLHGKFSLIDLAGNERGADTSSADRQTRLEGAE 468 (676)
T ss_pred HHHHHHhcccccccCcccCcccccccceeEeeeeecCC-------cceeEeEEEEEEccCCccCCcccccchhhhhhhhh
Confidence 33356669999999999987751 2567899999999999998887 566667779999
Q ss_pred chhhhhcccccceeeeeccccc
Q psy12523 119 INKQEALESMGISVQASGIKVE 140 (544)
Q Consensus 119 in~~~~l~g~~~~i~a~g~~~s 140 (544)
||| +|+.+--||.|+|....
T Consensus 469 INK--SLLALKECIRaLg~nk~ 488 (676)
T KOG0246|consen 469 INK--SLLALKECIRALGRNKS 488 (676)
T ss_pred hhH--HHHHHHHHHHHhcCCCC
Confidence 999 99999999999985533
No 55
>PF00225 Kinesin: Kinesin motor domain; InterPro: IPR001752 Kinesin [, , ] is a microtubule-associated force-producing protein that may play a role in organelle transport. The kinesin motor activity is directed toward the microtubule's plus end. Kinesin is an oligomeric complex composed of two heavy chains and two light chains. The maintenance of the quaternary structure does not require interchain disulphide bonds. The heavy chain is composed of three structural domains: a large globular N-terminal domain which is responsible for the motor activity of kinesin (it is known to hydrolyse ATP, to bind and move on microtubules), a central alpha-helical coiled coil domain that mediates the heavy chain dimerisation; and a small globular C-terminal domain which interacts with other proteins (such as the kinesin light chains), vesicles and membranous organelles. A number of proteins have been recently found that contain a domain similar to that of the kinesin 'motor' domain [, ]: Drosophila melanogaster claret segregational protein (ncd). Ncd is required for normal chromosomal segregation in meiosis, in females, and in early mitotic divisions of the embryo. The ncd motor activity is directed toward the microtubule's minus end. Homo sapiens CENP-E []. CENP-E is a protein that associates with kinetochores during chromosome congression, relocates to the spindle midzone at anaphase, and is quantitatively discarded at the end of the cell division. CENP-E is probably an important motor molecule in chromosome movement and/or spindle elongation. H. sapiens mitotic kinesin-like protein-1 (MKLP-1), a motor protein whose activity is directed toward the microtubule's plus end. Saccharomyces cerevisiae KAR3 protein, which is essential for nuclear fusion during mating. KAR3 may mediate microtubule sliding during nuclear fusion and possibly mitosis. S. cerevisiae CIN8 and KIP1 proteins which are required for the assembly of the mitotic spindle. Both proteins seem to interact with spindle microtubules to produce an outwardly directed force acting upon the poles. Emericella nidulans (Aspergillus nidulans) bimC, which plays an important role in nuclear division. A. nidulans klpA. Caenorhabditis elegans unc-104, which may be required for the transport of substances needed for neuronal cell differentiation. C. elegans osm-3. Xenopus laevis Eg5, which may be involved in mitosis. Arabidopsis thaliana KatA, KatB and katC. Chlamydomonas reinhardtii FLA10/KHP1 and KLP1. Both proteins seem to play a role in the rotation or twisting of the microtubules of the flagella. C. elegans hypothetical protein T09A5.2. The kinesin motor domain is located in the N-terminal part of most of the above proteins, with the exception of KAR3, klpA, and ncd where it is located in the C-terminal section. The kinesin motor domain contains about 330 amino acids. An ATP-binding motif of type A is found near position 80 to 90, the C-terminal half of the domain is involved in microtubule-binding.; GO: 0003777 microtubule motor activity, 0005524 ATP binding, 0007018 microtubule-based movement; PDB: 3NWN_A 2Y5W_A 2Y65_C 3BFN_A 2WBE_C 2ZFL_A 2ZFI_A 1I6I_A 2ZFM_A 1IA0_K ....
Probab=99.82 E-value=1.5e-21 Score=201.55 Aligned_cols=131 Identities=37% Similarity=0.512 Sum_probs=110.3
Q ss_pred CCC--CCCCCchHHHHHHHHHHHHhccCC-CeeEeeeEeecccccceeehhhhhhHHHHh--------------------
Q psy12523 1 MGS--QDNKGIIPRLCDSLFDLIAKQESS-ELTYNPYIRTPIRKYEMIYSCRVSMLKMIY-------------------- 57 (544)
Q Consensus 1 ~G~--~~~~Giipr~~~~lF~~i~~~~~~-~~~y~~~v~~l~~~~~eiy~e~~~dll~~~-------------------- 57 (544)
+|+ ++++|||||++++||..++..... .+.|.++| ||+|||||.++|||...
T Consensus 93 ~G~~~~~~~Gli~~~~~~lf~~~~~~~~~~~~~~~v~v-----S~~EIy~e~v~DLL~~~~~~~~~~l~i~~~~~~g~~~ 167 (335)
T PF00225_consen 93 FGSNDPSEPGLIPRALRDLFSQIEERKEKSGYEFSVSV-----SYLEIYNEKVYDLLSPNNSKSRKPLKIREDSNKGSVY 167 (335)
T ss_dssp TBSTSTTTBSHHHHHHHHHHHHHHHHTTTSTEEEEEEE-----EEEEEETTEEEETTSTTSSSTTSEBEEEEETTTEEEE
T ss_pred cccccccccchhhhHHHHHhhhhccccccccccccccc-----cchhhhhhhhhhhcCccccccccccceeeccccccce
Confidence 366 789999999999999999987765 67899999 99999999999999222
Q ss_pred --------------------------------cccCCCCcceEEEEEEEEeeecCCCCCcceeEeeeeeeeccCCccccc
Q psy12523 58 --------------------------------GLKASNSTHAVFSVVLTQTLVDTKSGVEGEKVARLSLVDLAGSERAVK 105 (544)
Q Consensus 58 --------------------------------~n~~ssrSH~i~~i~~~~~~~~~~~~~~~~~~s~l~lvDLAGSEr~~~ 105 (544)
.|..|||||+||+|+|.+.......+......|+|+|||||||||..+
T Consensus 168 i~~l~~~~v~s~~~~~~~l~~~~~~R~~~~t~~n~~sSRSH~i~~i~v~~~~~~~~~~~~~~~~s~l~~vDLaGsE~~~~ 247 (335)
T PF00225_consen 168 IKGLTEVEVKSAEEALQLLKKGQKNRRTASTKMNARSSRSHAIFTIHVEQKDRDPSDDEESVKHSRLTFVDLAGSERLKK 247 (335)
T ss_dssp ETTSEEEEESSHHHHHHHHHHHHHHHTCTSSSCTHHGGGSEEEEEEEEEEEETTTTTEEEEEEEEEEEEEEEEESTGGCG
T ss_pred eeccccccccccccccccccchhhccccccccccccccccccccccccccccccccccccceeecceeeeeccccccccc
Confidence 222389999999999999976653222246899999999999999999
Q ss_pred cCcc-cccccccccchhhhhcccccceeeeeccc
Q psy12523 106 TGAV-GERLKEGSNINKQEALESMGISVQASGIK 138 (544)
Q Consensus 106 ~~~~-g~~~~e~~~in~~~~l~g~~~~i~a~g~~ 138 (544)
+++. |++++|+..||+ ++..+..||.++...
T Consensus 248 ~~~~~~~~~~e~~~in~--Sl~~L~~vi~~L~~~ 279 (335)
T PF00225_consen 248 SGASDGQRLKESSNINK--SLSALGNVIRALAQG 279 (335)
T ss_dssp CSSSSHHHHHHHHHHHH--HHHHHHHHHHHHHCT
T ss_pred ccccccccccccceecc--hhhhhhhhHhhhhcc
Confidence 9874 899999999999 788888888888766
No 56
>smart00129 KISc Kinesin motor, catalytic domain. ATPase. Microtubule-dependent molecular motors that play important roles in intracellular transport of organelles and in cell division.
Probab=99.81 E-value=1.6e-20 Score=193.83 Aligned_cols=127 Identities=39% Similarity=0.573 Sum_probs=109.5
Q ss_pred CCCCCCCCchHHHHHHHHHHHHhccCCCeeEeeeEeecccccceeehhhhhhHH--------------------------
Q psy12523 1 MGSQDNKGIIPRLCDSLFDLIAKQESSELTYNPYIRTPIRKYEMIYSCRVSMLK-------------------------- 54 (544)
Q Consensus 1 ~G~~~~~Giipr~~~~lF~~i~~~~~~~~~y~~~v~~l~~~~~eiy~e~~~dll-------------------------- 54 (544)
+|+++++|||||++++||+.+.+..+ ...|.+++ ||+|||+|.++|||
T Consensus 98 ~G~~~~~Gli~~~~~~Lf~~~~~~~~-~~~~~v~~-----S~~ei~~e~v~DLL~~~~~~l~i~~~~~~~~~i~~l~~~~ 171 (335)
T smart00129 98 SGTPDSPGIIPRALKDLFEKIDKLEE-GWQFQVKV-----SYLEIYNEKIRDLLNPSPKKLEIREDKKGGVYVKGLTEIS 171 (335)
T ss_pred cCCCCCCCHHHHHHHHHHHHhhhccc-CceEEEEE-----EEEEEECCEEEECcCCCCCCcEEEECCCCCEEecCCEEEE
Confidence 47888999999999999999977654 55788899 99999999999999
Q ss_pred ---------------------HHhcccCCCCcceEEEEEEEEeeecCCCCCcceeEeeeeeeeccCCccccccCcccccc
Q psy12523 55 ---------------------MIYGLKASNSTHAVFSVVLTQTLVDTKSGVEGEKVARLSLVDLAGSERAVKTGAVGERL 113 (544)
Q Consensus 55 ---------------------~~~~n~~ssrSH~i~~i~~~~~~~~~~~~~~~~~~s~l~lvDLAGSEr~~~~~~~g~~~ 113 (544)
.+..|..|||||+||+|+|.+.... ........|+|+|||||||||..++++.|+++
T Consensus 172 v~s~~e~~~~l~~~~~~R~~~~t~~n~~ssRsH~i~~l~v~~~~~~--~~~~~~~~s~l~~VDLaGse~~~~~~~~~~~~ 249 (335)
T smart00129 172 VSSFEEVYNLLEKGNKNRTVAATKMNEESSRSHAVFTITVESKIKN--SSSGSGKASKLNLVDLAGSERASKTGAEGDRL 249 (335)
T ss_pred eCCHHHHHHHHHHHHhccccccCCCCCCCCcceEEEEEEEEEEecC--CCCCCEEEEEEEEEECCCCCccccccChhHHH
Confidence 2334566999999999999987333 23466899999999999999999999999999
Q ss_pred cccccchhhhhcccccceeeeecc
Q psy12523 114 KEGSNINKQEALESMGISVQASGI 137 (544)
Q Consensus 114 ~e~~~in~~~~l~g~~~~i~a~g~ 137 (544)
+|+..||+ ++..++.||.+...
T Consensus 250 ~e~~~in~--sl~~L~~~l~~l~~ 271 (335)
T smart00129 250 KEAGNINK--SLSALGNVINALAD 271 (335)
T ss_pred Hhhchhhh--HHHHHHHHHHHHHh
Confidence 99999999 88888888888864
No 57
>cd00106 KISc Kinesin motor domain. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In most kinesins, the motor domain is found at the N-terminus (N-type), in some its is found in the middle (M-type), or C-terminal (C-type). N-type and M-type kinesins are (+) end-directed motors, while C-type kinesins are (-) end-directed motors, i.e. they transport cargo towards the (-) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain, which repositions the other head domain through the coil
Probab=99.80 E-value=3e-20 Score=191.37 Aligned_cols=130 Identities=38% Similarity=0.535 Sum_probs=111.5
Q ss_pred CCCCCCCCchHHHHHHHHHHHHhccCCCeeEeeeEeecccccceeehhhhhhHHHH------------------------
Q psy12523 1 MGSQDNKGIIPRLCDSLFDLIAKQESSELTYNPYIRTPIRKYEMIYSCRVSMLKMI------------------------ 56 (544)
Q Consensus 1 ~G~~~~~Giipr~~~~lF~~i~~~~~~~~~y~~~v~~l~~~~~eiy~e~~~dll~~------------------------ 56 (544)
+|+++++|||||++++||+.+++....+..|.+.+ +++|||+|.++|||..
T Consensus 97 ~G~~~~~Gli~~~~~~Lf~~~~~~~~~~~~~~v~~-----S~~Ei~~e~v~DLL~~~~~~~~l~i~~~~~~~~~v~~l~~ 171 (328)
T cd00106 97 FGSPKDPGIIPRALEDLFNLIDERKEKNKSFSVSV-----SYLEIYNEKVYDLLSPEPPSKPLSLREDPKGGVYVKGLTE 171 (328)
T ss_pred cCCCCCCchHHHHHHHHHHHHhhccccCceEEEEE-----EEEEEECCEeEECCCCCCCCCCcEEEEcCCCCEEEeCCEE
Confidence 47788999999999999999998776567799999 9999999999999822
Q ss_pred -------------------------hcccCCCCcceEEEEEEEEeeecCCCCCcceeEeeeeeeeccCCccccccCcccc
Q psy12523 57 -------------------------YGLKASNSTHAVFSVVLTQTLVDTKSGVEGEKVARLSLVDLAGSERAVKTGAVGE 111 (544)
Q Consensus 57 -------------------------~~n~~ssrSH~i~~i~~~~~~~~~~~~~~~~~~s~l~lvDLAGSEr~~~~~~~g~ 111 (544)
..|..|||||+||+|+|.+..... .......|+|+|||||||||..++++.|.
T Consensus 172 ~~v~s~~e~~~~l~~~~~~R~~~~t~~n~~ssRSH~i~~i~v~~~~~~~--~~~~~~~s~l~~VDLaGse~~~~~~~~~~ 249 (328)
T cd00106 172 VEVGSAEDALSLLQKGLKNRTTASTAMNERSSRSHAIFTIHVEQRNTTN--DGRSIKSSKLNLVDLAGSERAKKTGAEGD 249 (328)
T ss_pred EEeCCHHHHHHHHHHHHhhcCcccCcCCCCcCcCcEEEEEEEEEEecCC--CCccEEEEEEEEEECCCCCcccccCCchh
Confidence 234448999999999999986553 11248899999999999999999999999
Q ss_pred cccccccchhhhhcccccceeeeecccc
Q psy12523 112 RLKEGSNINKQEALESMGISVQASGIKV 139 (544)
Q Consensus 112 ~~~e~~~in~~~~l~g~~~~i~a~g~~~ 139 (544)
+++|+..||+ ++..+..||.+.....
T Consensus 250 ~~~e~~~in~--sl~~L~~vl~~l~~~~ 275 (328)
T cd00106 250 RLKEAKNINK--SLSALGNVISALSSGQ 275 (328)
T ss_pred hhHhHHhhhh--hHHHHHHHHHHHHhcC
Confidence 9999999999 8888888888877544
No 58
>cd01363 Motor_domain Myosin and Kinesin motor domain. These ATPases belong to the P-loop NTPase family and provide the driving force in myosin and kinesin mediated processes.
Probab=99.73 E-value=2.5e-18 Score=162.29 Aligned_cols=113 Identities=35% Similarity=0.488 Sum_probs=92.7
Q ss_pred CCCCCCCCchHHHHHHHHHHHHhccCCCeeEeeeEeecccccceeehhhhhhHHHHhcccCCCCcceEEEEEEEEeeecC
Q psy12523 1 MGSQDNKGIIPRLCDSLFDLIAKQESSELTYNPYIRTPIRKYEMIYSCRVSMLKMIYGLKASNSTHAVFSVVLTQTLVDT 80 (544)
Q Consensus 1 ~G~~~~~Giipr~~~~lF~~i~~~~~~~~~y~~~v~~l~~~~~eiy~e~~~dll~~~~n~~ssrSH~i~~i~~~~~~~~~ 80 (544)
+|+++++|||||+++++++.++........ ..+..|..|||||+||+|++.+.....
T Consensus 42 ~G~~~~~Giip~~~~~~~~ll~~g~~~R~~-----------------------~~t~~N~~SSRsH~i~~i~v~~~~~~~ 98 (186)
T cd01363 42 EGKREGAGIIPRTVTDVIDLMDKGNANRTT-----------------------AATAMNEHSSRSHSVFRIHFGGKNALA 98 (186)
T ss_pred CCCCCCCCcchHHHHHHHHHHhhccccccc-----------------------cccCCCCccCcccEEEEEEEEEeecCC
Confidence 578899999999999988877654431111 145678889999999999999986554
Q ss_pred CCCCcceeEeeeeeeeccCCccccccCcccccccccccchhhhhcccccceeeeecccc
Q psy12523 81 KSGVEGEKVARLSLVDLAGSERAVKTGAVGERLKEGSNINKQEALESMGISVQASGIKV 139 (544)
Q Consensus 81 ~~~~~~~~~s~l~lvDLAGSEr~~~~~~~g~~~~e~~~in~~~~l~g~~~~i~a~g~~~ 139 (544)
.+......|+|+|||||||||..++++.|++++|+..||+ ++..++.||.++....
T Consensus 99 -~~~~~~~~s~l~lVDLAGsE~~~~~~~~~~~~~e~~~in~--sl~~L~~~i~~l~~~~ 154 (186)
T cd01363 99 -SATEQPKVGKINLVDLAGSERIDFSGAEGSRLTETANINK--SLSTLGNVISALAERD 154 (186)
T ss_pred -CCccceeeeeEEEEEccccccccccCCchhhHHHHHHHhh--HHHHHHHHHHHHhcCC
Confidence 3345678999999999999999999999999999999999 7777788888877643
No 59
>PF08776 VASP_tetra: VASP tetramerisation domain; InterPro: IPR014885 Vasodilator-stimulated phosphoprotein (VASP) is an actin cytoskeletal regulatory protein. This region corresponds to the tetramerisation domain which forms a right handed alpha helical coiled coil structure []. ; PDB: 1USE_A 1USD_A.
Probab=32.18 E-value=69 Score=21.89 Aligned_cols=21 Identities=43% Similarity=0.707 Sum_probs=17.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhc
Q psy12523 508 ARIIRELRQEVDKLKEMLISA 528 (544)
Q Consensus 508 ~~~i~~l~~ei~~Lk~~l~~~ 528 (544)
..++++.++|+.++|+++..|
T Consensus 10 qEIL~EvrkEl~K~K~EIIeA 30 (40)
T PF08776_consen 10 QEILEEVRKELQKVKEEIIEA 30 (40)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 356788999999999888765
No 60
>PF04508 Pox_A_type_inc: Viral A-type inclusion protein repeat ; InterPro: IPR007596 The repeat is found in the A-type inclusion protein of the Poxvirus family [].; GO: 0016032 viral reproduction
Probab=23.82 E-value=1.1e+02 Score=18.32 Aligned_cols=17 Identities=24% Similarity=0.473 Sum_probs=14.2
Q ss_pred HHHHHHHHHHHHHHHHh
Q psy12523 511 IRELRQEVDKLKEMLIS 527 (544)
Q Consensus 511 i~~l~~ei~~Lk~~l~~ 527 (544)
+++|+..|..|+.+|..
T Consensus 3 ~~rlr~rI~dLer~L~~ 19 (23)
T PF04508_consen 3 MNRLRNRISDLERQLSE 19 (23)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 67889999999988864
Done!