BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy12530
(189 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q7KVW5|KCNN_DROME Small conductance calcium-activated potassium channel protein
OS=Drosophila melanogaster GN=SK PE=2 SV=2
Length = 927
Score = 141 bits (356), Expect = 2e-33, Method: Composition-based stats.
Identities = 75/106 (70%), Positives = 76/106 (71%), Gaps = 29/106 (27%)
Query: 84 GCTALLVAVVSRKMELTRAEKHVHNFMMDTQLTKRLKNAAANVLRETWLIYKHTRLVKRV 143
GCTALLVAVVSRK+ELTRAEKHVHNFMMDTQLTKRLKN
Sbjct: 735 GCTALLVAVVSRKLELTRAEKHVHNFMMDTQLTKRLKN---------------------- 772
Query: 144 NAGRLKNAAANVLRETWLIYKHTRLVKRVNAGRVRTHQRKFLLAIY 189
AAANVLRETWLIYKHTRLVKRVN GRVRTHQRKFLLAIY
Sbjct: 773 -------AAANVLRETWLIYKHTRLVKRVNPGRVRTHQRKFLLAIY 811
>sp|Q9EQR3|KCNN1_MOUSE Small conductance calcium-activated potassium channel protein 1
OS=Mus musculus GN=Kcnn1 PE=1 SV=2
Length = 537
Score = 122 bits (306), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 65/106 (61%), Positives = 73/106 (68%), Gaps = 29/106 (27%)
Query: 84 GCTALLVAVVSRKMELTRAEKHVHNFMMDTQLTKRLKNAAANVLRETWLIYKHTRLVKRV 143
GCTAL+VAVV+RK+ELT+AEKHVHNFMMDTQLTKR+KNAAANVLRETWLIYKHTRL
Sbjct: 353 GCTALVVAVVARKLELTKAEKHVHNFMMDTQLTKRVKNAAANVLRETWLIYKHTRL---- 408
Query: 144 NAGRLKNAAANVLRETWLIYKHTRLVKRVNAGRVRTHQRKFLLAIY 189
VK+ + GRVR HQRKFL AI+
Sbjct: 409 -------------------------VKKPDQGRVRKHQRKFLQAIH 429
>sp|P70605|KCNN3_RAT Small conductance calcium-activated potassium channel protein 3
OS=Rattus norvegicus GN=Kcnn3 PE=2 SV=3
Length = 732
Score = 121 bits (304), Expect = 2e-27, Method: Composition-based stats.
Identities = 61/106 (57%), Positives = 73/106 (68%), Gaps = 29/106 (27%)
Query: 84 GCTALLVAVVSRKMELTRAEKHVHNFMMDTQLTKRLKNAAANVLRETWLIYKHTRLVKRV 143
GCTAL+VAVV+RK+ELT+AEKHVHNFMMDTQLTKR+KNAAANVLRETWLIYKHT
Sbjct: 534 GCTALVVAVVARKLELTKAEKHVHNFMMDTQLTKRIKNAAANVLRETWLIYKHT------ 587
Query: 144 NAGRLKNAAANVLRETWLIYKHTRLVKRVNAGRVRTHQRKFLLAIY 189
+L+K+++ +VR HQRKFL AI+
Sbjct: 588 -----------------------KLLKKIDHAKVRKHQRKFLQAIH 610
>sp|Q9UGI6|KCNN3_HUMAN Small conductance calcium-activated potassium channel protein 3
OS=Homo sapiens GN=KCNN3 PE=2 SV=1
Length = 736
Score = 121 bits (304), Expect = 2e-27, Method: Composition-based stats.
Identities = 61/106 (57%), Positives = 73/106 (68%), Gaps = 29/106 (27%)
Query: 84 GCTALLVAVVSRKMELTRAEKHVHNFMMDTQLTKRLKNAAANVLRETWLIYKHTRLVKRV 143
GCTAL+VAVV+RK+ELT+AEKHVHNFMMDTQLTKR+KNAAANVLRETWLIYKHT
Sbjct: 538 GCTALVVAVVARKLELTKAEKHVHNFMMDTQLTKRIKNAAANVLRETWLIYKHT------ 591
Query: 144 NAGRLKNAAANVLRETWLIYKHTRLVKRVNAGRVRTHQRKFLLAIY 189
+L+K+++ +VR HQRKFL AI+
Sbjct: 592 -----------------------KLLKKIDHAKVRKHQRKFLQAIH 614
>sp|P58392|KCNN3_PIG Small conductance calcium-activated potassium channel protein 3
OS=Sus scrofa GN=KCNN3 PE=2 SV=1
Length = 724
Score = 121 bits (304), Expect = 2e-27, Method: Composition-based stats.
Identities = 61/106 (57%), Positives = 73/106 (68%), Gaps = 29/106 (27%)
Query: 84 GCTALLVAVVSRKMELTRAEKHVHNFMMDTQLTKRLKNAAANVLRETWLIYKHTRLVKRV 143
GCTAL+VAVV+RK+ELT+AEKHVHNFMMDTQLTKR+KNAAANVLRETWLIYKHT
Sbjct: 526 GCTALVVAVVARKLELTKAEKHVHNFMMDTQLTKRIKNAAANVLRETWLIYKHT------ 579
Query: 144 NAGRLKNAAANVLRETWLIYKHTRLVKRVNAGRVRTHQRKFLLAIY 189
+L+K+++ +VR HQRKFL AI+
Sbjct: 580 -----------------------KLLKKIDHAKVRKHQRKFLQAIH 602
>sp|Q92952|KCNN1_HUMAN Small conductance calcium-activated potassium channel protein 1
OS=Homo sapiens GN=KCNN1 PE=2 SV=2
Length = 543
Score = 120 bits (300), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 64/106 (60%), Positives = 72/106 (67%), Gaps = 29/106 (27%)
Query: 84 GCTALLVAVVSRKMELTRAEKHVHNFMMDTQLTKRLKNAAANVLRETWLIYKHTRLVKRV 143
GCTAL+VAVV+RK+ELT+AEKHVHNFMMDTQLTKR+KNAAANVLRETWLIYKHTR
Sbjct: 356 GCTALVVAVVARKLELTKAEKHVHNFMMDTQLTKRVKNAAANVLRETWLIYKHTR----- 410
Query: 144 NAGRLKNAAANVLRETWLIYKHTRLVKRVNAGRVRTHQRKFLLAIY 189
LVK+ + RVR HQRKFL AI+
Sbjct: 411 ------------------------LVKKPDQARVRKHQRKFLQAIH 432
>sp|P70606|KCNN1_RAT Small conductance calcium-activated potassium channel protein 1
OS=Rattus norvegicus GN=Kcnn1 PE=1 SV=2
Length = 536
Score = 119 bits (299), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 64/106 (60%), Positives = 72/106 (67%), Gaps = 29/106 (27%)
Query: 84 GCTALLVAVVSRKMELTRAEKHVHNFMMDTQLTKRLKNAAANVLRETWLIYKHTRLVKRV 143
GCTAL+VAVV+RK+ELT+AEKHVHNFMMDTQLTKR+KNAAANVLRETWLIYKHTR
Sbjct: 352 GCTALVVAVVARKLELTKAEKHVHNFMMDTQLTKRVKNAAANVLRETWLIYKHTR----- 406
Query: 144 NAGRLKNAAANVLRETWLIYKHTRLVKRVNAGRVRTHQRKFLLAIY 189
LVK+ + RVR HQRKFL AI+
Sbjct: 407 ------------------------LVKKPDQSRVRKHQRKFLQAIH 428
>sp|P58391|KCNN3_MOUSE Small conductance calcium-activated potassium channel protein 3
OS=Mus musculus GN=Kcnn3 PE=2 SV=1
Length = 731
Score = 119 bits (299), Expect = 1e-26, Method: Composition-based stats.
Identities = 59/106 (55%), Positives = 72/106 (67%), Gaps = 29/106 (27%)
Query: 84 GCTALLVAVVSRKMELTRAEKHVHNFMMDTQLTKRLKNAAANVLRETWLIYKHTRLVKRV 143
GCTAL+VAVV+RK+ELT+AEKHVHNFMMDTQLTKR+KNAA NVLRETWL+YKHT
Sbjct: 533 GCTALVVAVVARKLELTKAEKHVHNFMMDTQLTKRIKNAATNVLRETWLVYKHT------ 586
Query: 144 NAGRLKNAAANVLRETWLIYKHTRLVKRVNAGRVRTHQRKFLLAIY 189
+L+K+++ +VR HQRKFL AI+
Sbjct: 587 -----------------------KLLKKIDHAKVRKHQRKFLQAIH 609
>sp|P58390|KCNN2_MOUSE Small conductance calcium-activated potassium channel protein 2
OS=Mus musculus GN=Kcnn2 PE=2 SV=1
Length = 574
Score = 116 bits (291), Expect = 7e-26, Method: Composition-based stats.
Identities = 61/106 (57%), Positives = 73/106 (68%), Gaps = 29/106 (27%)
Query: 84 GCTALLVAVVSRKMELTRAEKHVHNFMMDTQLTKRLKNAAANVLRETWLIYKHTRLVKRV 143
GCTAL+VAVV+RK+ELT+AEKHVHNFMMDTQLTKR+KNAAANVLRETWLIYK+T+
Sbjct: 379 GCTALVVAVVARKLELTKAEKHVHNFMMDTQLTKRVKNAAANVLRETWLIYKNTK----- 433
Query: 144 NAGRLKNAAANVLRETWLIYKHTRLVKRVNAGRVRTHQRKFLLAIY 189
LVK+++ +VR HQRKFL AI+
Sbjct: 434 ------------------------LVKKIDHAKVRKHQRKFLQAIH 455
>sp|Q9H2S1|KCNN2_HUMAN Small conductance calcium-activated potassium channel protein 2
OS=Homo sapiens GN=KCNN2 PE=2 SV=2
Length = 579
Score = 115 bits (287), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 61/106 (57%), Positives = 73/106 (68%), Gaps = 29/106 (27%)
Query: 84 GCTALLVAVVSRKMELTRAEKHVHNFMMDTQLTKRLKNAAANVLRETWLIYKHTRLVKRV 143
GCTAL+VAVV+RK+ELT+AEKHVHNFMMDTQLTKR+KNAAANVLRETWLIYK+T
Sbjct: 384 GCTALVVAVVARKLELTKAEKHVHNFMMDTQLTKRVKNAAANVLRETWLIYKNT------ 437
Query: 144 NAGRLKNAAANVLRETWLIYKHTRLVKRVNAGRVRTHQRKFLLAIY 189
+LVK+++ +VR HQRKFL AI+
Sbjct: 438 -----------------------KLVKKIDHAKVRKHQRKFLQAIH 460
>sp|P70604|KCNN2_RAT Small conductance calcium-activated potassium channel protein 2
OS=Rattus norvegicus GN=Kcnn2 PE=1 SV=1
Length = 580
Score = 115 bits (287), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 61/106 (57%), Positives = 73/106 (68%), Gaps = 29/106 (27%)
Query: 84 GCTALLVAVVSRKMELTRAEKHVHNFMMDTQLTKRLKNAAANVLRETWLIYKHTRLVKRV 143
GCTAL+VAVV+RK+ELT+AEKHVHNFMMDTQLTKR+KNAAANVLRETWLIYK+T
Sbjct: 385 GCTALVVAVVARKLELTKAEKHVHNFMMDTQLTKRVKNAAANVLRETWLIYKNT------ 438
Query: 144 NAGRLKNAAANVLRETWLIYKHTRLVKRVNAGRVRTHQRKFLLAIY 189
+LVK+++ +VR HQRKFL AI+
Sbjct: 439 -----------------------KLVKKIDHAKVRKHQRKFLQAIH 461
>sp|O15554|KCNN4_HUMAN Intermediate conductance calcium-activated potassium channel
protein 4 OS=Homo sapiens GN=KCNN4 PE=1 SV=1
Length = 427
Score = 87.4 bits (215), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 51/94 (54%), Positives = 64/94 (68%), Gaps = 7/94 (7%)
Query: 85 CTALLVAVVSRKMELTRAEKHVHNFMMDTQLTKRLKNAAANVLRETWLIYKHTRLVKRVN 144
CTALLVAVV+RK+E +AEKHVHNFMMD Q TK +K +AA VL+E W+ YKHTR K +
Sbjct: 277 CTALLVAVVARKLEFNKAEKHVHNFMMDIQYTKEMKESAARVLQEAWMFYKHTRR-KESH 335
Query: 145 AGRLKN----AAANVLRETWLIYKHTRLVKRVNA 174
A R AA N R+ L KH +L ++VN+
Sbjct: 336 AARRHQRKLLAAINAFRQVRL--KHRKLREQVNS 367
>sp|O89109|KCNN4_MOUSE Intermediate conductance calcium-activated potassium channel
protein 4 OS=Mus musculus GN=Kcnn4 PE=2 SV=1
Length = 425
Score = 79.0 bits (193), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 35/54 (64%), Positives = 43/54 (79%)
Query: 85 CTALLVAVVSRKMELTRAEKHVHNFMMDTQLTKRLKNAAANVLRETWLIYKHTR 138
CTALLVAVV+RK+E +AEKHVHNFMMD K +K +AA +L+E W+ YKHTR
Sbjct: 275 CTALLVAVVARKLEFNKAEKHVHNFMMDIHYAKEMKESAARLLQEAWMYYKHTR 328
>sp|Q9QYW1|KCNN4_RAT Intermediate conductance calcium-activated potassium channel
protein 4 OS=Rattus norvegicus GN=Kcnn4 PE=2 SV=2
Length = 425
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 35/54 (64%), Positives = 43/54 (79%)
Query: 85 CTALLVAVVSRKMELTRAEKHVHNFMMDTQLTKRLKNAAANVLRETWLIYKHTR 138
CTALLVAVV+RK+E +AEKHVHNFMMD K +K +AA +L+E W+ YKHTR
Sbjct: 275 CTALLVAVVARKLEFNKAEKHVHNFMMDIHYAKEMKESAARLLQEAWMYYKHTR 328
>sp|Q11122|YX11_CAEEL Uncharacterized protein C03F11.1 OS=Caenorhabditis elegans
GN=C03F11.1 PE=4 SV=2
Length = 692
Score = 53.9 bits (128), Expect = 6e-07, Method: Composition-based stats.
Identities = 33/104 (31%), Positives = 56/104 (53%), Gaps = 30/104 (28%)
Query: 86 TALLVAVVSRKMELTRAEKHVHNFMMDTQLTKRLKNAAANVLRETWLIYKHTRLVKRVNA 145
+++L+AV+SR + L++ +++V+NFM D++L + K AAA VL+ TW I+K ++ +
Sbjct: 533 SSILIAVISRNILLSQGQRNVNNFMYDSKLAREHKEAAARVLQHTWHIHK---CLQGSDG 589
Query: 146 GRLKNAAANVLRETWLIYKHTRLVKRVNAGRVRTHQRKFLLAIY 189
G R+RT+QRKFL AI+
Sbjct: 590 GNR---------------------------RLRTYQRKFLKAIH 606
>sp|Q9NUA8|ZBT40_HUMAN Zinc finger and BTB domain-containing protein 40 OS=Homo sapiens
GN=ZBTB40 PE=1 SV=4
Length = 1239
Score = 33.1 bits (74), Expect = 1.0, Method: Composition-based stats.
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 7/61 (11%)
Query: 18 KTFHFHISTALILKQCHLVLIQK-------ENKRRRKEGEEDKEEGGGGGGKRKKKKKKK 70
K+FHF+ + +K+C + ++ E K +KE ++ + E G GG+ KKKK
Sbjct: 743 KSFHFYCRLKVHMKRCRVAKSKQVQCKECSETKDSKKELDKHQLEAHGAGGEPDAPKKKK 802
Query: 71 K 71
K
Sbjct: 803 K 803
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.133 0.392
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 66,199,545
Number of Sequences: 539616
Number of extensions: 2650803
Number of successful extensions: 24527
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 168
Number of HSP's successfully gapped in prelim test: 79
Number of HSP's that attempted gapping in prelim test: 21589
Number of HSP's gapped (non-prelim): 2440
length of query: 189
length of database: 191,569,459
effective HSP length: 111
effective length of query: 78
effective length of database: 131,672,083
effective search space: 10270422474
effective search space used: 10270422474
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 58 (26.9 bits)