Query psy12531
Match_columns 183
No_of_seqs 157 out of 682
Neff 4.3
Searched_HMMs 46136
Date Fri Aug 16 21:42:44 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy12531.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/12531hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1557|consensus 100.0 2.2E-88 4.8E-93 597.6 13.6 182 1-183 1-305 (363)
2 PLN02455 fructose-bisphosphate 100.0 3E-85 6.5E-90 584.3 16.1 178 5-183 1-300 (358)
3 PTZ00019 fructose-bisphosphate 100.0 5.6E-84 1.2E-88 576.1 15.2 172 11-183 2-298 (355)
4 cd00948 FBP_aldolase_I_a Fruct 100.0 8.9E-84 1.9E-88 570.9 15.0 169 14-183 2-293 (330)
5 PLN02227 fructose-bisphosphate 100.0 1.4E-83 3.1E-88 578.7 15.4 172 9-183 49-342 (399)
6 PLN02425 probable fructose-bis 100.0 2.3E-83 5.1E-88 576.5 15.6 178 3-183 34-333 (390)
7 PF00274 Glycolytic: Fructose- 100.0 1.4E-77 3.1E-82 536.2 11.6 168 15-183 1-291 (348)
8 cd00344 FBP_aldolase_I Fructos 100.0 3.5E-75 7.6E-80 517.1 13.9 170 14-183 2-294 (328)
9 COG3588 Fructose-1,6-bisphosph 100.0 9.1E-68 2E-72 464.5 11.3 169 14-183 3-293 (332)
10 PRK05377 fructose-1,6-bisphosp 100.0 1.3E-47 2.7E-52 335.8 10.9 103 22-127 8-123 (296)
11 cd00949 FBP_aldolase_I_bact Fr 100.0 1.9E-44 4.2E-49 315.3 9.7 102 22-126 5-116 (292)
12 PRK06015 keto-hydroxyglutarate 65.1 4.1 8.8E-05 34.7 1.8 121 12-163 14-164 (201)
13 KOG0742|consensus 60.7 7.1 0.00015 38.0 2.7 70 4-73 326-398 (630)
14 PF11285 DUF3086: Protein of u 53.9 8.9 0.00019 34.6 2.0 62 42-111 187-254 (283)
15 TIGR01182 eda Entner-Doudoroff 48.3 12 0.00027 31.8 1.9 124 12-166 18-171 (204)
16 PF06167 Peptidase_M90: Glucos 44.7 21 0.00046 31.3 2.9 70 3-87 36-110 (253)
17 PRK06552 keto-hydroxyglutarate 38.8 85 0.0018 26.6 5.6 131 12-164 23-176 (213)
18 PRK15410 DgsA anti-repressor M 37.6 30 0.00066 30.7 2.8 69 4-87 27-100 (260)
19 PF03681 UPF0150: Uncharacteri 37.6 26 0.00057 22.4 1.8 22 140-163 19-40 (48)
20 PF06738 DUF1212: Protein of u 37.1 11 0.00025 30.3 0.1 33 147-179 77-110 (193)
21 KOG1749|consensus 35.6 22 0.00047 29.0 1.4 84 9-108 24-119 (143)
22 PRK07114 keto-hydroxyglutarate 35.3 21 0.00046 30.8 1.4 119 14-163 27-180 (222)
23 TIGR03104 trio_amidotrans aspa 34.9 40 0.00088 32.5 3.4 23 133-155 252-274 (589)
24 cd00532 MGS-like MGS-like doma 33.3 45 0.00098 24.9 2.8 40 10-53 8-47 (112)
25 COG5400 Uncharacterized protei 31.8 36 0.00078 29.3 2.2 113 16-152 46-164 (205)
26 TIGR00683 nanA N-acetylneurami 31.3 2.9E+02 0.0063 24.1 7.8 100 5-110 48-164 (290)
27 COG0367 AsnB Asparagine syntha 29.9 63 0.0014 31.2 3.7 35 133-167 222-256 (542)
28 PRK03170 dihydrodipicolinate s 29.5 2.7E+02 0.0058 24.0 7.3 99 4-109 47-162 (292)
29 PF14337 DUF4393: Domain of un 29.2 45 0.00097 26.9 2.3 76 38-114 17-93 (186)
30 smart00027 EH Eps15 homology d 29.2 1.1E+02 0.0023 22.0 4.1 41 7-51 3-43 (96)
31 PRK03620 5-dehydro-4-deoxygluc 26.7 3.6E+02 0.0078 23.6 7.7 96 4-109 53-165 (303)
32 COG4396 Mu-like prophage host- 26.6 26 0.00057 29.2 0.5 16 100-116 145-160 (170)
33 cd00954 NAL N-Acetylneuraminic 24.1 4E+02 0.0086 23.0 7.4 101 4-110 47-164 (288)
34 PF01386 Ribosomal_L25p: Ribos 24.1 77 0.0017 23.1 2.5 29 87-115 6-34 (88)
35 cd02847 Chitobiase_C_term Chit 23.6 36 0.00078 24.9 0.7 43 104-146 14-60 (78)
36 cd00952 CHBPH_aldolase Trans-o 23.1 4.5E+02 0.0098 23.2 7.7 99 5-109 55-170 (309)
37 cd00951 KDGDH 5-dehydro-4-deox 22.4 5.1E+02 0.011 22.5 7.7 96 4-109 46-158 (289)
38 cd03030 GRX_SH3BGR Glutaredoxi 21.8 49 0.0011 24.6 1.1 34 44-77 33-74 (92)
39 COG0505 CarA Carbamoylphosphat 21.4 78 0.0017 29.8 2.6 35 72-107 74-109 (368)
40 TIGR00674 dapA dihydrodipicoli 21.1 4.7E+02 0.01 22.5 7.2 60 4-63 44-120 (285)
41 PRK02228 V-type ATP synthase s 21.0 1.5E+02 0.0033 22.1 3.7 55 51-121 28-82 (100)
42 PRK04147 N-acetylneuraminate l 20.7 4.8E+02 0.01 22.5 7.3 99 4-109 50-165 (293)
No 1
>KOG1557|consensus
Probab=100.00 E-value=2.2e-88 Score=597.63 Aligned_cols=182 Identities=69% Similarity=1.078 Sum_probs=179.9
Q ss_pred CCCCCCCCChHHHHHHHHHHHHHhcCCCceEeecCCCCchHHHhhhcCCCCchhhHHhhhhhhcccCCCCCCceeeeecc
Q psy12531 1 MTTYFNYPPPALQEELKKIAEAIVAPGKGILAADESVSTMGKRLQDIGCENTEEHRRLYRQLLFTSDKVIGDNISGVILF 80 (183)
Q Consensus 1 ~~~~~~~~~~~~~~eL~~ta~~i~a~GKGiLAaDES~gt~~KRl~~iGventeenRr~yRelL~tt~~~~~~~IsGvILf 80 (183)
|.++++.++.++++||.+||++|++|||||||||||++||+|||++|||||||+|||+|||+|||+ |++.+||||||||
T Consensus 1 m~~~~~~~~~~~~~EL~~~A~~I~~pGkGILAaDES~~T~gkRl~sIgveNtE~NRr~yRelLftt-pg~~~~IsGvILf 79 (363)
T KOG1557|consen 1 MSHYFPFLSKAQKDELIKIAKKIVTPGKGILAADESTGTIGKRLASIGVENTEENRRAYRELLFTT-PGLNQYISGVILF 79 (363)
T ss_pred CCccccccCHHHHHHHHHHHHHhcCCCCceEeecCCcchHHHHHHhcCCcccHHHHHHHHHHhhcC-CChhhccceEEee
Confidence 789999999999999999999999999999999999999999999999999999999999999999 8999999999999
Q ss_pred hhhhcccccCCCchHHHhhhCCceeeEecCCccccCCCCCCccccch---------------------------------
Q psy12531 81 HETLYQKADDGTPFVELLKQRGIIPGIKVDKGVVPLMGSEDECTTQA--------------------------------- 127 (183)
Q Consensus 81 eETl~Q~~~dG~~~~~~L~~~GIvpGIKVDkG~~pL~g~~~E~~TqG--------------------------------- 127 (183)
||||||+++||+||+|+|+++|||||||||||++||+|+++|++|||
T Consensus 80 eETlyQkt~dGkpf~~~L~~~givpGIKvDKG~vplaGt~~E~ttqGLD~L~~Rca~y~k~Ga~FAKWR~vlki~~~~PS 159 (363)
T KOG1557|consen 80 EETLYQKTDDGKPFVDLLKEKGIVPGIKVDKGLVPLAGTNGETTTQGLDGLAERCAQYYKDGARFAKWRAVLKIGDGTPS 159 (363)
T ss_pred eehheeeCCCCCCHHHHHHhcCCccceEecCCcccccccCCcceeechhhHHHHHHHHHHcCCchhheeEEEEecCCCch
Confidence 99999999999999999999999999999999999999999999999
Q ss_pred --------------------------------------------------------------------------------
Q psy12531 128 -------------------------------------------------------------------------------- 127 (183)
Q Consensus 128 -------------------------------------------------------------------------------- 127 (183)
T Consensus 160 ~lai~EnA~~LARYA~IcQ~nGLVPIVEPEil~dGdHdi~r~~~VtE~Vla~vykaL~~hhV~lEGtLLKPnMVTpG~~s 239 (363)
T KOG1557|consen 160 ALAIKENANGLARYASICQQNGLVPIVEPEILPDGDHDIKRCQYVTEKVLAAVYKALNDHHVYLEGTLLKPNMVTPGAES 239 (363)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCcccccccccccCCcccHHHHHHHHHHHHHHHHHHhhhcceeeeceecccccccCCccc
Confidence
Q ss_pred ----------hhHHHhhhccCCCCCCceeeccCCCCHHHHHHHhHHHhccCCCCCceeeeeccCCC
Q psy12531 128 ----------QATVQALQRTVPAAVPGITFLSGGQSEEEASVNLDAINKYSGKKPWALTFSYGRAL 183 (183)
Q Consensus 128 ----------~~Tv~~l~rtVP~avpGi~FLSGGqsee~At~~LnaiN~~~~~~PW~LsFSygRAL 183 (183)
.+||++|+||||||||||+||||||||||||.||||||++++++||+|||||||||
T Consensus 240 ~~K~tpe~iA~~TvtaLrrtVP~AVPGI~FLSGgqseeeAt~nLnAiN~~~~~kpW~LtFSygRAL 305 (363)
T KOG1557|consen 240 TEKYTPEQIALATVTALRRTVPAAVPGIVFLSGGQSEEEATLNLNAINQEPGPKPWSLTFSYGRAL 305 (363)
T ss_pred cccCCHHHHHHHHHHHHHhcCCCCCceEEEecCCccHhhhhcchHHhhcCCCCCCceeeehHHHHH
Confidence 78999999999999999999999999999999999999999999999999999997
No 2
>PLN02455 fructose-bisphosphate aldolase
Probab=100.00 E-value=3e-85 Score=584.29 Aligned_cols=178 Identities=60% Similarity=0.900 Sum_probs=172.8
Q ss_pred CCCCChHHHHHHHHHHHHHhcCCCceEeecCCCCchHHHhhhcCCCCchhhHHhhhhhhcccCCCCCCceeeeecchhhh
Q psy12531 5 FNYPPPALQEELKKIAEAIVAPGKGILAADESVSTMGKRLQDIGCENTEEHRRLYRQLLFTSDKVIGDNISGVILFHETL 84 (183)
Q Consensus 5 ~~~~~~~~~~eL~~ta~~i~a~GKGiLAaDES~gt~~KRl~~iGventeenRr~yRelL~tt~~~~~~~IsGvILfeETl 84 (183)
+..++.++++||.+||++|++|||||||||||+|||+|||++|||||||||||+||++|||+ |++++||||||||||||
T Consensus 1 ~~~~~~~~~~eL~~tA~~iva~GKGiLAADES~gT~gKRl~~iGVente~nRr~yR~lLftt-p~~~~~IsGvILfeETl 79 (358)
T PLN02455 1 MSAFVGKYADELIKNAKYIATPGKGILAADESTGTIGKRLASINVENVESNRQALRELLFTA-PGALQYLSGVILFEETL 79 (358)
T ss_pred CCcccHHHHHHHHHHHHHHhCCCCeeEEeccCCCchhhHHHhcCCCCchHHHHHHHHhhccC-CcccccEEEEEcchHhc
Confidence 35678899999999999999999999999999999999999999999999999999999999 67899999999999999
Q ss_pred cccccCCCchHHHhhhCCceeeEecCCccccCCCCCCccccch-------------------------------------
Q psy12531 85 YQKADDGTPFVELLKQRGIIPGIKVDKGVVPLMGSEDECTTQA------------------------------------- 127 (183)
Q Consensus 85 ~Q~~~dG~~~~~~L~~~GIvpGIKVDkG~~pL~g~~~E~~TqG------------------------------------- 127 (183)
||+++||+||+|+|+++|||||||||||++||+|++||++|||
T Consensus 80 ~Q~~~dG~p~~~~L~~~GIvPGIKVDkGl~~l~g~~ge~~t~GLDgL~~R~~~y~~~GarFAKWRsVikI~~~~PS~~ai 159 (358)
T PLN02455 80 YQKTSDGKPFVDVLKENGVLPGIKVDKGTVELAGTNGETTTQGLDGLGARCAKYYEAGARFAKWRAVLKIGPTEPSELAI 159 (358)
T ss_pred cccccCCcCHHHHHHHCCCeeeEEecCCccccCCCCCCccCcchHHHHHHHHHHHhcCCceeeceeeeecCCCCCCHHHH
Confidence 9999999999999999999999999999999999999999999
Q ss_pred --------------------------------------------------------------------------------
Q psy12531 128 -------------------------------------------------------------------------------- 127 (183)
Q Consensus 128 -------------------------------------------------------------------------------- 127 (183)
T Consensus 160 ~~na~~LArYA~icQ~~GlVPIVEPEvL~dGdH~i~~c~~Vte~Vl~~vf~aL~~~~V~lEG~LLKPnMV~pG~~~~~~s 239 (358)
T PLN02455 160 QENAQGLARYAIICQENGLVPIVEPEILVDGSHDIKKCAAVTERVLAACYKALNDHHVLLEGTLLKPNMVTPGSDSPKVS 239 (358)
T ss_pred HHHHHHHHHHHHHHHHcCCCceecccccCCCCCCHHHHHHHHHHHHHHHHHHHHHcCcccccceeccccccCCcccCcCC
Confidence
Q ss_pred -----hhHHHhhhccCCCCCCceeeccCCCCHHHHHHHhHHHhccCCCCCceeeeeccCCC
Q psy12531 128 -----QATVQALQRTVPAAVPGITFLSGGQSEEEASVNLDAINKYSGKKPWALTFSYGRAL 183 (183)
Q Consensus 128 -----~~Tv~~l~rtVP~avpGi~FLSGGqsee~At~~LnaiN~~~~~~PW~LsFSygRAL 183 (183)
++||+||+||||+|||||+||||||||||||.||||||+++.++||+|||||||||
T Consensus 240 ~e~vA~~Tv~~l~rtVP~avpGI~FLSGGqSeeeAt~~LnamN~~~~~~PW~LsFSygRAL 300 (358)
T PLN02455 240 PEVIAEYTVRALQRTVPPAVPGIVFLSGGQSEEEATLNLNAMNKLKTLKPWTLSFSFGRAL 300 (358)
T ss_pred HHHHHHHHHHHHHhhCCccCCcceecCCCCcHHHHHHHHHHHhcCCCCCCceeccchhHhh
Confidence 78999999999999999999999999999999999999997778999999999997
No 3
>PTZ00019 fructose-bisphosphate aldolase; Provisional
Probab=100.00 E-value=5.6e-84 Score=576.06 Aligned_cols=172 Identities=63% Similarity=0.972 Sum_probs=168.3
Q ss_pred HHHHHHHHHHHHHhcCCCceEeecCCCCchHHHhhhcCCCCchhhHHhhhhhhcccCCCCCCceeeeecchhhhcccccC
Q psy12531 11 ALQEELKKIAEAIVAPGKGILAADESVSTMGKRLQDIGCENTEEHRRLYRQLLFTSDKVIGDNISGVILFHETLYQKADD 90 (183)
Q Consensus 11 ~~~~eL~~ta~~i~a~GKGiLAaDES~gt~~KRl~~iGventeenRr~yRelL~tt~~~~~~~IsGvILfeETl~Q~~~d 90 (183)
++++||.+||++|+++||||||||||+|||+|||++|||||||||||+||++|||+ |++++||||||||||||||+++|
T Consensus 2 ~~~~eL~~tA~~i~~~GKGilAADES~gT~~Krl~~iGvente~nrr~~R~llftt-p~~~~~IsGvILfeETl~q~~~d 80 (355)
T PTZ00019 2 EYAKELAETAKKIAAPGKGILAADESTGTIKKRFDPIGLENTEENRRAYRELLFTT-EGLEQYISGVILFEETVYQKAPS 80 (355)
T ss_pred cHHHHHHHHHHHHhCCCCeEEEeccCCCchhHHHHHcCCCCchHHHHHHHHhhccC-cchhhceEEEEcchHhccccccC
Confidence 57899999999999999999999999999999999999999999999999999999 67899999999999999999999
Q ss_pred CCchHHHhhhCCceeeEecCCccccCCCCCCccccch-------------------------------------------
Q psy12531 91 GTPFVELLKQRGIIPGIKVDKGVVPLMGSEDECTTQA------------------------------------------- 127 (183)
Q Consensus 91 G~~~~~~L~~~GIvpGIKVDkG~~pL~g~~~E~~TqG------------------------------------------- 127 (183)
|+||+|+|+++|||||||||||++||+|+++|++|||
T Consensus 81 G~p~~~~L~~~GIvPgIKVDkGl~~l~G~~~e~~t~GLD~L~~R~~~y~~~GarFAKwRsVi~i~~~~g~PS~~aI~~na 160 (355)
T PTZ00019 81 GKTFVELLKEKGIVPGIKVDKGLVTLPGTDGETSTQGLDGLAERAKKYYKAGARFAKWRAVLKIDPAKGKPSELAIQENA 160 (355)
T ss_pred CCChHHHHHHCCCeeeEEcCCCccCCCCCCCCccCcChHHHHHHHHHHHhcCCceeeeeeeeeecCCCCCCcHHHHHHHH
Confidence 9999999999999999999999999999999999999
Q ss_pred --------------------------------------------------------------------------------
Q psy12531 128 -------------------------------------------------------------------------------- 127 (183)
Q Consensus 128 -------------------------------------------------------------------------------- 127 (183)
T Consensus 161 ~~LaryA~icq~~GLVPIVEPEVlidG~H~i~~c~~vte~Vl~~v~~aL~~~~V~lEG~lLKPnMV~pG~~~~~~~s~e~ 240 (355)
T PTZ00019 161 WTLARYAAICQENGLVPIVEPEILIDGSHSIEVCQKVTEKVLAEVFKALNDHGVLLEGCLLKPNMVTPGSDCGVKATPQE 240 (355)
T ss_pred HHHHHHHHHHHHcCCCceecccccCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCeecCceeccccccCCCcCCCCCCHHH
Confidence
Q ss_pred --hhHHHhhhccCCCCCCceeeccCCCCHHHHHHHhHHHhccCCCCCceeeeeccCCC
Q psy12531 128 --QATVQALQRTVPAAVPGITFLSGGQSEEEASVNLDAINKYSGKKPWALTFSYGRAL 183 (183)
Q Consensus 128 --~~Tv~~l~rtVP~avpGi~FLSGGqsee~At~~LnaiN~~~~~~PW~LsFSygRAL 183 (183)
++||+||+||||+|||||+||||||||||||.||||||+++.++||+|||||||||
T Consensus 241 vA~~Tv~~l~rtVP~avPGI~FLSGGqSeeeAt~~LnamN~~~~~~PW~LsFSygRAL 298 (355)
T PTZ00019 241 VAFYTVRTLSRTVPPALPGVMFLSGGQSEEEASLNLNAMNKLTLPRPWALSFSYGRAL 298 (355)
T ss_pred HHHHHHHHHHhcCCccCCeeeeccCCCCHHHHHHHHHHhhcCCCCCCceeccchhHhh
Confidence 78999999999999999999999999999999999999997788999999999997
No 4
>cd00948 FBP_aldolase_I_a Fructose-1,6-bisphosphate aldolase. The enzyme catalyzes the cleavage of fructose 1,6-bisphosphate to glyceraldehyde 3-phosphate and dihydroxyacetone phosphate (DHAP). This family includes proteins found in vertebrates, plants, and bacterial plant pathogens. Mutations in the aldolase genes in humans cause hemolytic anemia and hereditary fructose intolerance. The enzyme is a member of the class I aldolase family, which utilizes covalent catalysis through a Schiff base formed between a lysine residue of the enzyme and ketose substrates.
Probab=100.00 E-value=8.9e-84 Score=570.87 Aligned_cols=169 Identities=72% Similarity=1.109 Sum_probs=165.5
Q ss_pred HHHHHHHHHHhcCCCceEeecCCCCchHHHhhhcCCCCchhhHHhhhhhhcccCCCCCCceeeeecchhhhcccccCCCc
Q psy12531 14 EELKKIAEAIVAPGKGILAADESVSTMGKRLQDIGCENTEEHRRLYRQLLFTSDKVIGDNISGVILFHETLYQKADDGTP 93 (183)
Q Consensus 14 ~eL~~ta~~i~a~GKGiLAaDES~gt~~KRl~~iGventeenRr~yRelL~tt~~~~~~~IsGvILfeETl~Q~~~dG~~ 93 (183)
+||.+||++|+++||||||||||+|||+|||++|||||||||||+||++|||+ |++++||||||||||||||+++||+|
T Consensus 2 ~eL~~tA~~iv~~GKGilAADES~gT~~Krl~~iGvente~nrr~yR~llft~-p~~~~~IsGvILfeeTl~q~~~dG~p 80 (330)
T cd00948 2 EELIKTAKAIVAPGKGILAADESTGTIGKRFASIGVENTEENRRAYRELLFTT-PGLGQYISGVILFEETLYQKTDDGKP 80 (330)
T ss_pred hHHHHHHHHHhCCCCeEEEecCCCCchHHHHHHcCCCCchHHHHHHHHhhccC-CCccccEEEEECChhhccccccCCcC
Confidence 69999999999999999999999999999999999999999999999999999 68889999999999999999999999
Q ss_pred hHHHhhhCCceeeEecCCccccCCCCCCccccch----------------------------------------------
Q psy12531 94 FVELLKQRGIIPGIKVDKGVVPLMGSEDECTTQA---------------------------------------------- 127 (183)
Q Consensus 94 ~~~~L~~~GIvpGIKVDkG~~pL~g~~~E~~TqG---------------------------------------------- 127 (183)
|+|+|+++|||||||||||++||+|+++|++|||
T Consensus 81 ~~~~L~~~GIvPgIKVDkGl~~l~g~~~e~~t~GLD~L~~R~~~y~~~GarFAKwRsVi~i~~~~PS~~~I~~na~~Lar 160 (330)
T cd00948 81 FVDILKEKGIVPGIKVDKGLVPLAGTDGETTTQGLDGLAERCAKYYKQGARFAKWRAVLKIGNGTPSELAIKENAHGLAR 160 (330)
T ss_pred hHHHHHHCCCeeeEEeCCCccccCCCCCCccCcChHHHHHHHHHHhhcCCcceeeheeeeccCCCCcHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999
Q ss_pred -----------------------------------------------------------------------------hhH
Q psy12531 128 -----------------------------------------------------------------------------QAT 130 (183)
Q Consensus 128 -----------------------------------------------------------------------------~~T 130 (183)
++|
T Consensus 161 yA~icq~~GLVPIVEPEVl~dG~H~i~~c~~vte~Vl~~vf~aL~~~~V~lEG~lLKPnMV~pG~~~~~~~~~e~vA~~T 240 (330)
T cd00948 161 YAAICQENGLVPIVEPEVLMDGDHDIERCQEVTEKVLAAVYKALNDHHVLLEGTLLKPNMVTPGADCKKKASPEEVAEYT 240 (330)
T ss_pred HHHHHHHcCCCceecccccCCCCCCHHHHHHHHHHHHHHHHHHHHHcCcccccceeccccccCCCcCCCcCCHHHHHHHH
Confidence 789
Q ss_pred HHhhhccCCCCCCceeeccCCCCHHHHHHHhHHHhccCCCCCceeeeeccCCC
Q psy12531 131 VQALQRTVPAAVPGITFLSGGQSEEEASVNLDAINKYSGKKPWALTFSYGRAL 183 (183)
Q Consensus 131 v~~l~rtVP~avpGi~FLSGGqsee~At~~LnaiN~~~~~~PW~LsFSygRAL 183 (183)
|+||+||||+|||||+||||||||||||+||||||++...+||+|||||||||
T Consensus 241 v~~l~rtvP~avpGI~FLSGGqseeeAt~~LnamN~~~~~~PW~LsFSygRAL 293 (330)
T cd00948 241 VRALRRTVPAAVPGIVFLSGGQSEEEATLNLNAMNKLPLPKPWALSFSYGRAL 293 (330)
T ss_pred HHHHHhcCCccCCeeeeccCCCCHHHHHHHHHHhhcCCCCCCcccccchhHHh
Confidence 99999999999999999999999999999999999987678999999999997
No 5
>PLN02227 fructose-bisphosphate aldolase I
Probab=100.00 E-value=1.4e-83 Score=578.68 Aligned_cols=172 Identities=54% Similarity=0.871 Sum_probs=168.4
Q ss_pred ChHHHHHHHHHHHHHhcCCCceEeecCCCCchHHHhhhcCCCCchhhHHhhhhhhcccCCCCCCceeeeecchhhhcccc
Q psy12531 9 PPALQEELKKIAEAIVAPGKGILAADESVSTMGKRLQDIGCENTEEHRRLYRQLLFTSDKVIGDNISGVILFHETLYQKA 88 (183)
Q Consensus 9 ~~~~~~eL~~ta~~i~a~GKGiLAaDES~gt~~KRl~~iGventeenRr~yRelL~tt~~~~~~~IsGvILfeETl~Q~~ 88 (183)
+.++++||.+||++|++|||||||+|||+|||+|||++|||||||||||+||++|||+ |++++||||||||||||||++
T Consensus 49 ~~~~~~eL~~tA~~ivapGKGIlAaDES~gT~gKRl~~iGVenteenRr~yR~lLftt-p~~~~~IsGvILFeETl~Q~~ 127 (399)
T PLN02227 49 ASAYADELVKTAKTIASPGHGIMAMDESNATCGKRLASIGLENTEANRQAYRTLLVSA-PGLGQYISGAILFEETLYQST 127 (399)
T ss_pred cHHHHHHHHHHHHHHhCCCCceeeeccCcChhHHHHHHcCCCCchHHHHHHHHhcccC-cchhcceEEEEcchhhccCcC
Confidence 7789999999999999999999999999999999999999999999999999999999 678999999999999999999
Q ss_pred cCCCchHHHhhhCCceeeEecCCccccCCCCCCccccch-----------------------------------------
Q psy12531 89 DDGTPFVELLKQRGIIPGIKVDKGVVPLMGSEDECTTQA----------------------------------------- 127 (183)
Q Consensus 89 ~dG~~~~~~L~~~GIvpGIKVDkG~~pL~g~~~E~~TqG----------------------------------------- 127 (183)
+||+||+|+|+++|||||||||||++||+|+++|++|||
T Consensus 128 ~dG~pf~d~L~~~GIVPGIKVDKGl~~l~g~~~e~~tqGLDgL~~R~~~Y~~~GarFAKWRsVikI~~~PS~~aI~~na~ 207 (399)
T PLN02227 128 TDGKKMVDVLVEQNIVPGIKVDKGLVPLVGSYDESWCQGLDGLASRTAAYYQQGARFAKWRTVVSIPNGPSALAVKEAAW 207 (399)
T ss_pred cCCcCHHHHHHHCCCeeeEEcCCCcccCCCCCCCccCCChHHHHHHHHHHHHcCCceeehheeeccCCCCCHHHHHHHHH
Confidence 999999999999999999999999999999999999999
Q ss_pred --------------------------------------------------------------------------------
Q psy12531 128 -------------------------------------------------------------------------------- 127 (183)
Q Consensus 128 -------------------------------------------------------------------------------- 127 (183)
T Consensus 208 ~LArYA~icQ~~GLVPIVEPEVliDGdH~ie~c~~Vte~VL~~vfkaL~~h~V~lEG~LLKPnMV~pG~~~~~~~s~e~V 287 (399)
T PLN02227 208 GLARYAAISQDSGLVPIVEPEIMLDGEHGIDRTYDVAEKVWAEVFFYLAQNNVMFEGILLKPSMVTPGAEATDRATPEQV 287 (399)
T ss_pred HHHHHHHHHHHcCCCceecceecCCCCcCHHHHHHHHHHHHHHHHHHHHHcCceeecceeccceeccCccCCCcCCHHHH
Confidence
Q ss_pred -hhHHHhhhccCCCCCCceeeccCCCCHHHHHHHhHHHhccCCCCCceeeeeccCCC
Q psy12531 128 -QATVQALQRTVPAAVPGITFLSGGQSEEEASVNLDAINKYSGKKPWALTFSYGRAL 183 (183)
Q Consensus 128 -~~Tv~~l~rtVP~avpGi~FLSGGqsee~At~~LnaiN~~~~~~PW~LsFSygRAL 183 (183)
++||+||+||||+|||||+||||||||||||.||||||++ ++||+|||||||||
T Consensus 288 A~~Tv~~L~rtVP~AVPGI~FLSGGQSeeeAt~nLnAmN~~--~~PW~LsFSygRAL 342 (399)
T PLN02227 288 ASYTLKLLRNRIPPAVPGIMFLSGGQSELEATLNLNAMNQA--PNPWHVSFSYARAL 342 (399)
T ss_pred HHHHHHHHHhcCCCCCCeeeecCCCCcHHHHHHHHHHhhcC--CCCceeccchHHhh
Confidence 7899999999999999999999999999999999999997 57999999999997
No 6
>PLN02425 probable fructose-bisphosphate aldolase
Probab=100.00 E-value=2.3e-83 Score=576.53 Aligned_cols=178 Identities=53% Similarity=0.875 Sum_probs=173.2
Q ss_pred CCCCCCChHHHHHHHHHHHHHhcCCCceEeecCCCCchHHHhhhcCCCCchhhHHhhhhhhcccCCCCCCceeeeecchh
Q psy12531 3 TYFNYPPPALQEELKKIAEAIVAPGKGILAADESVSTMGKRLQDIGCENTEEHRRLYRQLLFTSDKVIGDNISGVILFHE 82 (183)
Q Consensus 3 ~~~~~~~~~~~~eL~~ta~~i~a~GKGiLAaDES~gt~~KRl~~iGventeenRr~yRelL~tt~~~~~~~IsGvILfeE 82 (183)
..++.++.++++||.+||++|++|||||||+|||+|||+|||++|||||||||||+||++|||+ |++++||||||||||
T Consensus 34 ~~~~~~~~~~~~eL~~tA~~i~apGKGIlA~DES~gT~~Krl~~iGVente~nrr~yR~lLftt-p~~~~~IsGvILFeE 112 (390)
T PLN02425 34 VSFRIRAGSYSDELVQTAKSVASPGRGILAIDESNATCGKRLASIGLDNTETNRQAYRQLLLTT-PGLGEYISGAILFEE 112 (390)
T ss_pred cccccccHHHHHHHHHHHHHHhCCCCceEeeccccCchhHHHHHcCCCCchhhhHHHHhhhccC-cchhhceEEEEcchH
Confidence 3578899999999999999999999999999999999999999999999999999999999999 678999999999999
Q ss_pred hhcccccCCCchHHHhhhCCceeeEecCCccccCCCCCCccccch-----------------------------------
Q psy12531 83 TLYQKADDGTPFVELLKQRGIIPGIKVDKGVVPLMGSEDECTTQA----------------------------------- 127 (183)
Q Consensus 83 Tl~Q~~~dG~~~~~~L~~~GIvpGIKVDkG~~pL~g~~~E~~TqG----------------------------------- 127 (183)
||||+++||+||+|+|+++|||||||||||++||+|+++|++|||
T Consensus 113 Tl~q~~~dG~p~~d~L~~~GIVPGIKVDkGl~~l~G~~~e~~t~GLDgL~~R~~~y~~~GarFAKWRsViki~~~Ps~~a 192 (390)
T PLN02425 113 TLYQSTTDGKKFVDCLRDQNIVPGIKVDKGLVPLPGSNNESWCQGLDGLASRSAEYYKQGARFAKWRTVVSIPCGPSALA 192 (390)
T ss_pred hccccccCCcCHHHHHHHCCceeeEEecCCCCcCCCCCCCccCCChHHHHHHHHHHHHcCCceeehheeeccCCCCCHHH
Confidence 999999999999999999999999999999999999999999999
Q ss_pred --------------------------------------------------------------------------------
Q psy12531 128 -------------------------------------------------------------------------------- 127 (183)
Q Consensus 128 -------------------------------------------------------------------------------- 127 (183)
T Consensus 193 I~~na~~LArYA~icQ~~GLVPIVEPEVlidGdH~ie~c~~Vte~VL~~vf~aL~~~~V~lEG~LLKPnMV~pG~~~~~~ 272 (390)
T PLN02425 193 VKEAAWGLARYAAISQDNGLVPIVEPEILLDGDHPIERTLEVAEKVWSEVFFYLAQNNVLFEGILLKPSMVTPGAEHKEK 272 (390)
T ss_pred HHHHHHHHHHHHHHHHHcCCCceecceecCCCCcCHHHHHHHHHHHHHHHHHHHHHcCceeecceecccccccCCcCCCC
Confidence
Q ss_pred -------hhHHHhhhccCCCCCCceeeccCCCCHHHHHHHhHHHhccCCCCCceeeeeccCCC
Q psy12531 128 -------QATVQALQRTVPAAVPGITFLSGGQSEEEASVNLDAINKYSGKKPWALTFSYGRAL 183 (183)
Q Consensus 128 -------~~Tv~~l~rtVP~avpGi~FLSGGqsee~At~~LnaiN~~~~~~PW~LsFSygRAL 183 (183)
++||+||+||||+|||||+||||||||||||.||||||++ .+||+|||||||||
T Consensus 273 ~s~e~VA~~Tv~~l~rtVP~AVPGI~FLSGGqseeeAt~~LnamN~~--~~PW~LsFSygRAL 333 (390)
T PLN02425 273 ASPETIAKYTLTMLRRRVPPAVPGIMFLSGGQSEVEATLNLNAMNQS--PNPWHVSFSYARAL 333 (390)
T ss_pred CCHHHHHHHHHHHHHhcCCCCCCcceeccCCCcHHHHHHHHHhhcCC--CCCceeecchHHhh
Confidence 7899999999999999999999999999999999999996 57999999999997
No 7
>PF00274 Glycolytic: Fructose-bisphosphate aldolase class-I; InterPro: IPR000741 Fructose-bisphosphate aldolase (4.1.2.13 from EC) [, ] is a glycolytic enzyme that catalyses the reversible aldol cleavage or condensation of fructose-1,6-bisphosphate into dihydroxyacetone-phosphate and glyceraldehyde 3-phosphate. There are two classes of fructose-bisphosphate aldolases with different catalytic mechanisms: class I enzymes [] do not require a metal ion, and are characterised by the formation of a Schiff base intermediate between a highly conserved active site lysine and a substrate carbonyl group, while the class II enzymes require an active-site divalent metal ion. This entry represents the class I enzymes. In vertebrates, three forms of this enzyme are found: aldolase A is expressed in muscle, aldolase B in liver, kidney, stomach and intestine, and aldolase C in brain, heart and ovary. The different isozymes have different catalytic functions: aldolases A and C are mainly involved in glycolysis, while aldolase B is involved in both glycolysis and gluconeogenesis. Defects in aldolase B result in hereditary fructose intolerance.; GO: 0004332 fructose-bisphosphate aldolase activity, 0006096 glycolysis; PDB: 1EX5_B 6ALD_D 2QUU_B 3DFN_B 1ADO_B 3DFO_A 1ZAL_A 1J4E_C 3DFP_A 1ZAJ_B ....
Probab=100.00 E-value=1.4e-77 Score=536.20 Aligned_cols=168 Identities=68% Similarity=1.044 Sum_probs=151.7
Q ss_pred HHHHHHHHHhcCCCceEeecCCCCchHHHhhhcCCCCchhhHHhhhhhhcccCCCCCCceeeeecchhhhcccccCCCch
Q psy12531 15 ELKKIAEAIVAPGKGILAADESVSTMGKRLQDIGCENTEEHRRLYRQLLFTSDKVIGDNISGVILFHETLYQKADDGTPF 94 (183)
Q Consensus 15 eL~~ta~~i~a~GKGiLAaDES~gt~~KRl~~iGventeenRr~yRelL~tt~~~~~~~IsGvILfeETl~Q~~~dG~~~ 94 (183)
||++||++|+++||||||||||+|||+|||++|||||||||||+||++|||| |++++||||||||||||+|+++||+||
T Consensus 1 eL~~ta~~~~a~gKGiLAaDES~gt~~Krl~~~Gie~te~~r~~yR~~l~tt-~~~~~~IsGvILfeeTl~q~~~~G~~~ 79 (348)
T PF00274_consen 1 ELRATARAIVAPGKGILAADESGGTIPKRLAAYGIENTEENRRAYRELLFTT-PGLSEYISGVILFEETLYQKTADGKPF 79 (348)
T ss_dssp HHHHHHHHHTGTT-EEEEE---HHHHHHHHHHTTS-CGHHHHHHHHHHHHTS-GGGGGTEEEEEE-HHHHTSBETTSSBH
T ss_pred ChHHHHHHHhCCCCcEEEecCCCccHHHHHHHcCCCCchhhHHHHHHhhhcc-cccccceEEEEcccchhhccccCCCCh
Confidence 7999999999999999999999999999999999999999999999999999 899999999999999999999999999
Q ss_pred HHHhhhCCceeeEecCCccccCCCCCCccccch-----------------------------------------------
Q psy12531 95 VELLKQRGIIPGIKVDKGVVPLMGSEDECTTQA----------------------------------------------- 127 (183)
Q Consensus 95 ~~~L~~~GIvpGIKVDkG~~pL~g~~~E~~TqG----------------------------------------------- 127 (183)
+++|+++|||||||||||++||+|+++|++|+|
T Consensus 80 ~~~L~~~GIvpgIKVDkGl~~l~~~~~ek~t~GLD~L~~R~~~y~~~GarFaKwRsVi~i~~~~ps~~~I~~na~~lary 159 (348)
T PF00274_consen 80 PDYLKEKGIVPGIKVDKGLVPLPGGVQEKPTQGLDGLLERCAEYYAFGARFAKWRSVIKIGDGTPSEAAIKANAHQLARY 159 (348)
T ss_dssp HHHHHHTT-EEEEE---EEEEETTSSSEEEEETTTTHHHHHHHHHHTTEEEEEEEEEEESBTTBS-HHHHHHHHHHHHHH
T ss_pred HHHHHhcCceeeEeccCceeccccCCCceeCCCcchHHHHHHHHhhhcccceeeeeeeecCCCCCCHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999
Q ss_pred ----------------------------------------------------------------------------hhHH
Q psy12531 128 ----------------------------------------------------------------------------QATV 131 (183)
Q Consensus 128 ----------------------------------------------------------------------------~~Tv 131 (183)
.+||
T Consensus 160 A~icq~~GLVPIVEPEVli~g~h~~~~~~~vt~~vl~~v~~~l~~~~V~Leg~llKpnmv~pG~~~~~~~~~~~vA~~T~ 239 (348)
T PF00274_consen 160 AAICQEAGLVPIVEPEVLIDGDHDIERCAEVTEAVLAAVFKALNDHGVMLEGTLLKPNMVTPGKDHPKKASPEEVAEATV 239 (348)
T ss_dssp HHHHHHTT-EEEEEEEEESSSSTHHHHHHHHHHHHHHHHHHHHHHTTEEGGGEEEEEB-S---TTSSS---HHHHHHHHH
T ss_pred HHHHHhccCccccccccccCCCchHHHHHHHHHHHHHHHHHhhccCEEEeccccccccceeecccCCCCCCHHHHHHHHH
Confidence 6899
Q ss_pred HhhhccCCCCCCceeeccCCCCHHHHHHHhHHHhccCCCCCceeeeeccCCC
Q psy12531 132 QALQRTVPAAVPGITFLSGGQSEEEASVNLDAINKYSGKKPWALTFSYGRAL 183 (183)
Q Consensus 132 ~~l~rtVP~avpGi~FLSGGqsee~At~~LnaiN~~~~~~PW~LsFSygRAL 183 (183)
++|+|+||++||||+|||||||+||||+||||||+++.++||+|||||||||
T Consensus 240 ~~l~~~vP~aVpgIvFLSGGqs~e~At~~Lna~n~~~~~~PW~lsFSfgRAL 291 (348)
T PF00274_consen 240 RALRRTVPAAVPGIVFLSGGQSEEEATANLNAINKMPGNKPWPLSFSFGRAL 291 (348)
T ss_dssp HHHHHHSBTTSSEEEEB-TTS-HHHHHHHHHHHHHSSS--SSEEEEEESHHH
T ss_pred HHHHHhcccccceeEecCCCCCHHHHHHHHHHhhCCCcCCChheeEEechhh
Confidence 9999999999999999999999999999999999998789999999999997
No 8
>cd00344 FBP_aldolase_I Fructose-bisphosphate aldolase class I. Fructose-1,6-bisphosphate aldolase is an enzyme of the glycolytic and gluconeogenic pathways found in vertebrates, plants, and bacteria. The enzyme catalyzes the cleavage of fructose 1,6-bisphosphate to glyceraldehyde 3-phosphate and dihydroxyacetone phosphate (DHAP). Mutations in the aldolase genes in humans cause hemolytic anemia and hereditary fructose intolerance. The enzyme is a member of the class I aldolase family, which utilizes covalent catalysis through a Schiff base formed between a lysine residue of the enzyme and ketose substrates. Although structurally similar, the class II aldolases use a different mechanism and are believed to have an independent evolutionary origin.
Probab=100.00 E-value=3.5e-75 Score=517.07 Aligned_cols=170 Identities=70% Similarity=1.039 Sum_probs=166.3
Q ss_pred HHHHHHHHHHhcCCCceEeecCCCCchHHHhhhcCCCCchhhHHhhhhhhcccCCCCCCceeeeecchhhhcccccCCCc
Q psy12531 14 EELKKIAEAIVAPGKGILAADESVSTMGKRLQDIGCENTEEHRRLYRQLLFTSDKVIGDNISGVILFHETLYQKADDGTP 93 (183)
Q Consensus 14 ~eL~~ta~~i~a~GKGiLAaDES~gt~~KRl~~iGventeenRr~yRelL~tt~~~~~~~IsGvILfeETl~Q~~~dG~~ 93 (183)
++|.+||++|++|||||||||||+||++|||..+|+||+|+|||+||++||++++++++||||||||||||+|+++||++
T Consensus 2 ~eL~~~a~~~~~~GKGilAAdEssgt~~kR~~~i~~enteenrr~~r~ll~~~~~~i~~~IsGvILfeeTl~q~~~~g~~ 81 (328)
T cd00344 2 KELSDIAHRIVAPGKGILAADESTGSIAKRLQSIGTENTEENRRFYRQLLLTADDRVNPRIGGVILFHETLYQKADDGRP 81 (328)
T ss_pred hHHHHHHHHhcCCCCeeEEeccCCCcccchhhhCCCCCchhhHHHHHHHHhccCchhhccEEEEEechhhccccCCCCcc
Confidence 68999999999999999999999999999999999999999999999999997689999999999999999999999999
Q ss_pred hHHHhhhCCceeeEecCCccccCCCCCCccccch----------------------------------------------
Q psy12531 94 FVELLKQRGIIPGIKVDKGVVPLMGSEDECTTQA---------------------------------------------- 127 (183)
Q Consensus 94 ~~~~L~~~GIvpGIKVDkG~~pL~g~~~E~~TqG---------------------------------------------- 127 (183)
|+++|+++|||||||||||++||+|.++|++|+|
T Consensus 82 ~~~ll~~~GIvPgIKVDkGl~~l~g~~~ek~t~GLD~L~~R~~~y~~~GarfaKwRsVi~i~~~~Ps~~~I~~na~~lar 161 (328)
T cd00344 82 FPQVIKSKGGVVGIKVDKGVVPLAGTNGETTTQGLDGLSERCAQYKKDGADFAKWRCVLKIGEHTPSALAIMENANVLAR 161 (328)
T ss_pred HHHHHHhCCCeeeEEecCCcccCCCCCCCccCCChHHHHHHHHHHhhcCCceeeeeeeeecCCCCCcHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999
Q ss_pred -----------------------------------------------------------------------------hhH
Q psy12531 128 -----------------------------------------------------------------------------QAT 130 (183)
Q Consensus 128 -----------------------------------------------------------------------------~~T 130 (183)
.+|
T Consensus 162 yA~~cq~~GLVPIVEPEVlidg~h~i~~~~~vt~~vl~~~~~~L~~~~V~leg~lLKpnmv~~G~~~~~~~~~~~va~~t 241 (328)
T cd00344 162 YASICQQNGIVPIVEPEILPDGDHDLKRCQYVTEKVLAAVYKALSDHHIYLEGTLLKPNMVTPGHACTQKFSHEEIAMAT 241 (328)
T ss_pred HHHHHHHCCCCceecceeCCCCCccHHHHHHHHHHHHHHHHHHhhhcCCcccCeEEEccccccCccCCCcCCHHHHHHhh
Confidence 489
Q ss_pred HHhhhccCCCCCCceeeccCCCCHHHHHHHhHHHhccCCCCCceeeeeccCCC
Q psy12531 131 VQALQRTVPAAVPGITFLSGGQSEEEASVNLDAINKYSGKKPWALTFSYGRAL 183 (183)
Q Consensus 131 v~~l~rtVP~avpGi~FLSGGqsee~At~~LnaiN~~~~~~PW~LsFSygRAL 183 (183)
|++|+|+||+|||||+|||||||+||||+||||||++...+||+|||||||||
T Consensus 242 ~~~l~~~vP~aVpgVvfLSGGqS~eeAt~~Lna~n~~~~~~pW~lsfSfgRAL 294 (328)
T cd00344 242 VTALRRTVPPAVTGVTFLSGGQSEEEASINLNAINKCPLLKPWALTFSYGRAL 294 (328)
T ss_pred HHHHHhhCCCcCCeEEeccCCCCHHHHHHHHHHhcCCCCCCCceEEechHHHh
Confidence 99999999999999999999999999999999999987778999999999998
No 9
>COG3588 Fructose-1,6-bisphosphate aldolase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=9.1e-68 Score=464.55 Aligned_cols=169 Identities=52% Similarity=0.722 Sum_probs=164.3
Q ss_pred HHHHHHHHHHhcCCCceEeecCCCCchHHHhhhcCCCCchhhHHhhhhhhcccCCCCCCceeeeecchhhhcccccCCCc
Q psy12531 14 EELKKIAEAIVAPGKGILAADESVSTMGKRLQDIGCENTEEHRRLYRQLLFTSDKVIGDNISGVILFHETLYQKADDGTP 93 (183)
Q Consensus 14 ~eL~~ta~~i~a~GKGiLAaDES~gt~~KRl~~iGventeenRr~yRelL~tt~~~~~~~IsGvILfeETl~Q~~~dG~~ 93 (183)
.+|.+||.++|++||||||||||+||++|||++|||||||++||.||++||+||.++++||+|||||||||+|+.++|.|
T Consensus 3 erl~~~a~~~v~nGKG~iAADeS~gt~~krf~~~Gie~te~srrd~Re~l~~s~~~~~~yI~GaILfeeTm~q~~~~g~p 82 (332)
T COG3588 3 ERLNDTALKKVANGKGFIAADESGGTTPKRFDSYGIEETEYSRRDMRERLFTSPDFMEDYILGAILFEETMDQKADGGYP 82 (332)
T ss_pred cchhHHHHHHHhcCCceEeecCCCCchhhHHHHcCCCCchhhhHHHHHHHhcCcccchhhhhheehhHHHHHHhhcCCCC
Confidence 57899999999999999999999999999999999999999999999999999889999999999999999999999999
Q ss_pred hHHHhhhCCceeeEecCCccccCCCCCCccccch----------------------------------------------
Q psy12531 94 FVELLKQRGIIPGIKVDKGVVPLMGSEDECTTQA---------------------------------------------- 127 (183)
Q Consensus 94 ~~~~L~~~GIvpGIKVDkG~~pL~g~~~E~~TqG---------------------------------------------- 127 (183)
++++++++|||||||||||+.|++|.+.|+.|.|
T Consensus 83 ~~~l~~~kgivPgiKvDkGl~~~~g~~~ek~t~gLd~L~~R~~~~~~~GarfaKwRsvI~~~~~~ps~~~I~~nv~~la~ 162 (332)
T COG3588 83 ADYLWKEKGIVPGIKVDKGLKPLAGVQLEKPTEGLDGLLKRAKEYHIFGARFAKWRSVIKIADGIPSWGGIKANVHQLAE 162 (332)
T ss_pred HHHHHHhcCCCcceeecCCcccccCCccccCCcCHHHHHHHHHHhhhccchHHHHHHHHHhccCCCccchHHHHHHHHHH
Confidence 9999999999999999999999999999999999
Q ss_pred ----------------------------------------------------------------------------hhHH
Q psy12531 128 ----------------------------------------------------------------------------QATV 131 (183)
Q Consensus 128 ----------------------------------------------------------------------------~~Tv 131 (183)
+-|+
T Consensus 163 yAa~cq~aGlVPIVEPEV~mdg~~d~~~~eeVtk~~L~k~~~~L~~~~vvm~g~~lk~smv~~g~~~~~~s~~~vae~tl 242 (332)
T COG3588 163 YAALCQAAGLVPIVEPEVDIDGDHDKARSEEVTKAELRKLLNALNEERVVMLGLILKTSMVISGKKSREASPDEVAEDTL 242 (332)
T ss_pred HHHHHHHCCCcccccceeeccCcccHHHHHHHHHHHHHHHHHHhhhhHhHhhcccccchhccccccccccchHHHHHHHH
Confidence 4589
Q ss_pred HhhhccCCCCCCceeeccCCCCHHHHHHHhHHHhccCCCCCceeeeeccCCC
Q psy12531 132 QALQRTVPAAVPGITFLSGGQSEEEASVNLDAINKYSGKKPWALTFSYGRAL 183 (183)
Q Consensus 132 ~~l~rtVP~avpGi~FLSGGqsee~At~~LnaiN~~~~~~PW~LsFSygRAL 183 (183)
.+|+.|||++||||+|||||||.|||++||||||... +.||+|+|||||||
T Consensus 243 ~~~~~tvP~~vpgIvfLSGG~s~eeA~~~Lsa~n~~~-~~pw~L~fSf~RAL 293 (332)
T COG3588 243 YSLLSTVPAVVPGIVFLSGGYSSEEANAHLSANNGER-PLPWSLIFSFSRAL 293 (332)
T ss_pred HHHHhcCCcccceeEEecCCcchHHHHHHHHhhcCCC-CCCceeeeeHHHHh
Confidence 9999999999999999999999999999999999874 78999999999997
No 10
>PRK05377 fructose-1,6-bisphosphate aldolase; Reviewed
Probab=100.00 E-value=1.3e-47 Score=335.83 Aligned_cols=103 Identities=30% Similarity=0.442 Sum_probs=95.9
Q ss_pred HHhcCCCceEe-ecCCCCchHHHhhhcCCCCchhhH--------HhhhhhhcccCCCCCCceeeeecchhhhcccccCCC
Q psy12531 22 AIVAPGKGILA-ADESVSTMGKRLQDIGCENTEEHR--------RLYRQLLFTSDKVIGDNISGVILFHETLYQKADDGT 92 (183)
Q Consensus 22 ~i~a~GKGiLA-aDES~gt~~KRl~~iGventeenR--------r~yRelL~tt~~~~~~~IsGvILfeETl~Q~~~dG~ 92 (183)
.-+++|||||| +|||+|||+|||+.|||||||+|| |+||++|||+|.++++||||||||||||+| ++||+
T Consensus 8 ~~~~~GKG~lAAlDeS~GT~~Krl~~~GVente~n~~~eM~~li~~~R~~l~tsp~f~~~~I~GaILFEeTl~q-~~dG~ 86 (296)
T PRK05377 8 EKMKNGKGFIAALDQSGGSTPKALKLYGVEEDAYSNEEEMFDLVHEMRTRIITSPAFTGDKILGAILFEQTMDR-EIEGK 86 (296)
T ss_pred HhhcCCCceEEehhccCCchHHHHHHcCCCCcccccchhHHHHHHHHhhccccCccccccceEEEEcchHhhcC-ccCCc
Confidence 35799999996 599999999999999999999995 999999999976799999999999999999 78999
Q ss_pred chHHHhhh-CCceeeEecCCccccCCCCCC---ccccch
Q psy12531 93 PFVELLKQ-RGIIPGIKVDKGVVPLMGSED---ECTTQA 127 (183)
Q Consensus 93 ~~~~~L~~-~GIvpGIKVDkG~~pL~g~~~---E~~TqG 127 (183)
||+++||+ +|||||||||||++|++ +| ++.|+|
T Consensus 87 p~~d~L~e~kGIVPgIKVDKGl~~l~--~gvql~k~~~G 123 (296)
T PRK05377 87 PTADYLWEKKGVVPFLKVDKGLAEEA--NGVQLMKPIPN 123 (296)
T ss_pred CHHHHHHhcCCcceEEEecCCcccCC--CCccccccCCC
Confidence 99999998 99999999999999998 67 566777
No 11
>cd00949 FBP_aldolase_I_bact Fructose-1.6-bisphosphate aldolase found in gram +/- bacteria. The enzyme catalyzes the cleavage of fructose 1,6-bisphosphate to glyceraldehyde 3-phosphate and dihydroxyacetone phosphate (DHAP). The enzyme is member of the class I aldolase family, which utilizes covalent catalysis through a Schiff base formed between a lysine residue of the enzyme and ketose substrates.
Probab=100.00 E-value=1.9e-44 Score=315.32 Aligned_cols=102 Identities=32% Similarity=0.439 Sum_probs=94.4
Q ss_pred HHhcCCCceE-eecCCCCchHHHhhhcCCCCc-----hhhHH---hhhhhhcccCCCCCCceeeeecchhhhcccccCCC
Q psy12531 22 AIVAPGKGIL-AADESVSTMGKRLQDIGCENT-----EEHRR---LYRQLLFTSDKVIGDNISGVILFHETLYQKADDGT 92 (183)
Q Consensus 22 ~i~a~GKGiL-AaDES~gt~~KRl~~iGvent-----eenRr---~yRelL~tt~~~~~~~IsGvILfeETl~Q~~~dG~ 92 (183)
..+++||||| |+|||+|||+|||++|||||| ||||+ +||++|||+|.++++||||||||||||+|+ .||+
T Consensus 5 ~~~~~GKGilAAlDES~GT~~Krl~~iGVent~y~~eee~r~~ih~~R~~lftsp~f~~~~IsGaILFEeTl~q~-~dG~ 83 (292)
T cd00949 5 ERMKSGKGFIAALDQSGGSTPKALAAYGIEEDAYSNEEEMFDLVHEMRTRIITSPAFDGDKILGAILFEQTMDRE-IEGK 83 (292)
T ss_pred HhccCCCceEEehhccCCchHHHHHHcCCCCCCCCChHHHHHHHHHHhhccccCccccccceEEEEccHHhhcCc-cCCc
Confidence 4589999999 559999999999999999999 99995 999999999666999999999999999997 7999
Q ss_pred chHHHhhhCC-ceeeEecCCccccCCCCCCccccc
Q psy12531 93 PFVELLKQRG-IIPGIKVDKGVVPLMGSEDECTTQ 126 (183)
Q Consensus 93 ~~~~~L~~~G-IvpGIKVDkG~~pL~g~~~E~~Tq 126 (183)
||+++||++| ||||||||||++|++ +||++|+
T Consensus 84 p~~d~L~e~ggIVPgIKVDKGl~~la--~Ge~lmk 116 (292)
T cd00949 84 PTADYLWEKKQIVPFLKVDKGLAEEK--NGVQLMK 116 (292)
T ss_pred CHHHHHHhcCCeeeEEEecCCcccCC--CCcccCc
Confidence 9999999886 999999999999998 8999554
No 12
>PRK06015 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase; Provisional
Probab=65.15 E-value=4.1 Score=34.67 Aligned_cols=121 Identities=21% Similarity=0.239 Sum_probs=80.8
Q ss_pred HHHHHHHHHHHHhcCCCceEeecCCCCchHHHhhhcCCCCchhhHHhhhhhhcccCCCCCCceeeeecchhhhcccccCC
Q psy12531 12 LQEELKKIAEAIVAPGKGILAADESVSTMGKRLQDIGCENTEEHRRLYRQLLFTSDKVIGDNISGVILFHETLYQKADDG 91 (183)
Q Consensus 12 ~~~eL~~ta~~i~a~GKGiLAaDES~gt~~KRl~~iGventeenRr~yRelL~tt~~~~~~~IsGvILfeETl~Q~~~dG 91 (183)
..++...+++++++.|=.++ |-+=+.+..++.| ++-+++|.++++.+ |-||-.|+..+-...|
T Consensus 14 ~~~~a~~ia~al~~gGi~~i---Eit~~tp~a~~~I-----~~l~~~~~~~~vGA---------GTVl~~e~a~~ai~aG 76 (201)
T PRK06015 14 DVEHAVPLARALAAGGLPAI---EITLRTPAALDAI-----RAVAAEVEEAIVGA---------GTILNAKQFEDAAKAG 76 (201)
T ss_pred CHHHHHHHHHHHHHCCCCEE---EEeCCCccHHHHH-----HHHHHHCCCCEEee---------EeCcCHHHHHHHHHcC
Confidence 34578889999999998888 7777777777766 34455666665554 5688889988877777
Q ss_pred CchH----------HHhhhCCceeeEecCCccccCCC--CCCcccc---ch--------------hhHHHhhhccCCCCC
Q psy12531 92 TPFV----------ELLKQRGIIPGIKVDKGVVPLMG--SEDECTT---QA--------------QATVQALQRTVPAAV 142 (183)
Q Consensus 92 ~~~~----------~~L~~~GIvpGIKVDkG~~pL~g--~~~E~~T---qG--------------~~Tv~~l~rtVP~av 142 (183)
-.|. ++.+++||. -+|| |+.|-.+ .| -.-++.|+.-.|
T Consensus 77 A~FivSP~~~~~vi~~a~~~~i~----------~iPG~~TptEi~~A~~~Ga~~vK~FPa~~~GG~~yikal~~plp--- 143 (201)
T PRK06015 77 SRFIVSPGTTQELLAAANDSDVP----------LLPGAATPSEVMALREEGYTVLKFFPAEQAGGAAFLKALSSPLA--- 143 (201)
T ss_pred CCEEECCCCCHHHHHHHHHcCCC----------EeCCCCCHHHHHHHHHCCCCEEEECCchhhCCHHHHHHHHhhCC---
Confidence 6553 455566664 2333 2333211 12 345677776554
Q ss_pred Ccee-eccCCCCHHHHHHHhHH
Q psy12531 143 PGIT-FLSGGQSEEEASVNLDA 163 (183)
Q Consensus 143 pGi~-FLSGGqsee~At~~Lna 163 (183)
++- +=+||-|.+.+..+|+|
T Consensus 144 -~~~l~ptGGV~~~n~~~~l~a 164 (201)
T PRK06015 144 -GTFFCPTGGISLKNARDYLSL 164 (201)
T ss_pred -CCcEEecCCCCHHHHHHHHhC
Confidence 332 35899999999999987
No 13
>KOG0742|consensus
Probab=60.74 E-value=7.1 Score=37.99 Aligned_cols=70 Identities=20% Similarity=0.293 Sum_probs=51.1
Q ss_pred CCCCC-ChHHHHHHHHHHHHHhcCCCceEeecCCCCchHHHhhhcCCC--CchhhHHhhhhhhcccCCCCCCc
Q psy12531 4 YFNYP-PPALQEELKKIAEAIVAPGKGILAADESVSTMGKRLQDIGCE--NTEEHRRLYRQLLFTSDKVIGDN 73 (183)
Q Consensus 4 ~~~~~-~~~~~~eL~~ta~~i~a~GKGiLAaDES~gt~~KRl~~iGve--nteenRr~yRelL~tt~~~~~~~ 73 (183)
.|||. +-++-+-=....+.+.+.||+-|--==-..++.||++.+-+- ||..|+.-||.+||--|||.++.
T Consensus 326 ~~pw~gsls~~k~~i~~~~~~s~~gk~pl~~ViL~psLe~Rie~lA~aTaNTK~h~apfRNilfyGPPGTGKT 398 (630)
T KOG0742|consen 326 RFPWIGSLSALKHPIQGSRSASSRGKDPLEGVILHPSLEKRIEDLAIATANTKKHQAPFRNILFYGPPGTGKT 398 (630)
T ss_pred cCCCcccHHHHhchhhhhHhhhhcCCCCcCCeecCHHHHHHHHHHHHHhcccccccchhhheeeeCCCCCCch
Confidence 47887 334444444457888889988331111257889999987654 99999999999999999999876
No 14
>PF11285 DUF3086: Protein of unknown function (DUF3086); InterPro: IPR021437 This family of proteins with unknown function appears to be restricted to Cyanobacteria.
Probab=53.86 E-value=8.9 Score=34.57 Aligned_cols=62 Identities=31% Similarity=0.445 Sum_probs=40.8
Q ss_pred HHhhhcCCCCchhhHHhhhhhhcccCCCCCCc----eeeeecchh--hhcccccCCCchHHHhhhCCceeeEecCC
Q psy12531 42 KRLQDIGCENTEEHRRLYRQLLFTSDKVIGDN----ISGVILFHE--TLYQKADDGTPFVELLKQRGIIPGIKVDK 111 (183)
Q Consensus 42 KRl~~iGventeenRr~yRelL~tt~~~~~~~----IsGvILfeE--Tl~Q~~~dG~~~~~~L~~~GIvpGIKVDk 111 (183)
.||..+=+-|+.|-=..||.-|=.+ =|++.. =+||+|||. .|-|+ +|-|.++|-+|.|=+|.
T Consensus 187 dr~~tLVLA~~PERLGEWRRGLQDc-LGi~R~DFGP~~GivLFE~~daL~qr-------ADRL~~~~~lPlIiID~ 254 (283)
T PF11285_consen 187 DRFQTLVLANSPERLGEWRRGLQDC-LGISREDFGPNSGIVLFERPDALIQR-------ADRLEERGELPLIIIDA 254 (283)
T ss_pred cceeeeeecCChhHHHHHHHHHHHh-hCCCccccCCCcceEEeeCcHHHHHH-------HHHHHhcCCCCEEEEcc
Confidence 3444444557776555666554333 233221 289999984 67776 57899999999999985
No 15
>TIGR01182 eda Entner-Doudoroff aldolase. 2-deydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14) is an enzyme of the Entner-Doudoroff pathway. This aldolase has another function, 4-hydroxy-2-oxoglutarate aldolase (EC 4.1.3.16) shown experimentally in Escherichia coli and Pseudomonas putida
Probab=48.31 E-value=12 Score=31.81 Aligned_cols=124 Identities=24% Similarity=0.309 Sum_probs=77.3
Q ss_pred HHHHHHHHHHHHhcCCCceEeecCCCCchHHHhhhcCCCCchhhHHhhhhhhcccCCCCCCceeeeecchhhhcccccCC
Q psy12531 12 LQEELKKIAEAIVAPGKGILAADESVSTMGKRLQDIGCENTEEHRRLYRQLLFTSDKVIGDNISGVILFHETLYQKADDG 91 (183)
Q Consensus 12 ~~~eL~~ta~~i~a~GKGiLAaDES~gt~~KRl~~iGventeenRr~yRelL~tt~~~~~~~IsGvILfeETl~Q~~~dG 91 (183)
..++...+++++++-|=.++ |-+-+.+..++.| ++.|+.|.++++. .|-||-.|+..+-...|
T Consensus 18 ~~e~a~~~~~al~~~Gi~~i---Eit~~t~~a~~~i-----~~l~~~~~~~~vG---------AGTVl~~~~a~~a~~aG 80 (204)
T TIGR01182 18 DVDDALPLAKALIEGGLRVL---EVTLRTPVALDAI-----RLLRKEVPDALIG---------AGTVLNPEQLRQAVDAG 80 (204)
T ss_pred CHHHHHHHHHHHHHcCCCEE---EEeCCCccHHHHH-----HHHHHHCCCCEEE---------EEeCCCHHHHHHHHHcC
Confidence 34577888999999888888 5555556665544 3445555555544 36688888888776677
Q ss_pred CchH----------HHhhhCCceeeEecCCccccCCC--CCCcccc---c--------------hhhHHHhhhccCCCCC
Q psy12531 92 TPFV----------ELLKQRGIIPGIKVDKGVVPLMG--SEDECTT---Q--------------AQATVQALQRTVPAAV 142 (183)
Q Consensus 92 ~~~~----------~~L~~~GIvpGIKVDkG~~pL~g--~~~E~~T---q--------------G~~Tv~~l~rtVP~av 142 (183)
-.|. +..+++||. -+|| |+.|-.. - |-..++.|+.-.|
T Consensus 81 A~FivsP~~~~~v~~~~~~~~i~----------~iPG~~TptEi~~A~~~Ga~~vKlFPA~~~GG~~yikal~~plp--- 147 (204)
T TIGR01182 81 AQFIVSPGLTPELAKHAQDHGIP----------IIPGVATPSEIMLALELGITALKLFPAEVSGGVKMLKALAGPFP--- 147 (204)
T ss_pred CCEEECCCCCHHHHHHHHHcCCc----------EECCCCCHHHHHHHHHCCCCEEEECCchhcCCHHHHHHHhccCC---
Confidence 5543 555566653 2333 2222211 1 1456777776443
Q ss_pred Cceee-ccCCCCHHHHHHHhHHHhc
Q psy12531 143 PGITF-LSGGQSEEEASVNLDAINK 166 (183)
Q Consensus 143 pGi~F-LSGGqsee~At~~LnaiN~ 166 (183)
++-| =+||-+.+.+..+|+|=+.
T Consensus 148 -~i~~~ptGGV~~~N~~~~l~aGa~ 171 (204)
T TIGR01182 148 -QVRFCPTGGINLANVRDYLAAPNV 171 (204)
T ss_pred -CCcEEecCCCCHHHHHHHHhCCCE
Confidence 4433 5799999999999986443
No 16
>PF06167 Peptidase_M90: Glucose-regulated metallo-peptidase M90; InterPro: IPR010384 MtfA (earlier known as YeeI) is a transcription factor that binds Mlc (make large colonies), itself a repressor of glucose and hence a protein important in regulation of the phosphoenolpyruvate:glucose-phosphotransferase (PtsG) system, the major glucose transporter in Escherichia coli. Mlc is a repressor of ptsG, and MtfA is found to bind and inactivate Mlc with high affinity []. The membrane-bound protein EIICBGlc encoded by the ptsG gene is the major glucose transporter in E. coli. ; PDB: 3DL1_A 3KHI_A.
Probab=44.75 E-value=21 Score=31.31 Aligned_cols=70 Identities=17% Similarity=0.253 Sum_probs=41.0
Q ss_pred CCCCCCChHHHHHHHHHHHHHhcCCCceEeecCCCCchHHHhhhc-CCCCchhhHH----hhhhhhcccCCCCCCceeee
Q psy12531 3 TYFNYPPPALQEELKKIAEAIVAPGKGILAADESVSTMGKRLQDI-GCENTEEHRR----LYRQLLFTSDKVIGDNISGV 77 (183)
Q Consensus 3 ~~~~~~~~~~~~eL~~ta~~i~a~GKGiLAaDES~gt~~KRl~~i-GventeenRr----~yRelL~tt~~~~~~~IsGv 77 (183)
.+|..|++++++.|...+...++ .|+|... |+|=|+++|- .-=.++|.-+...-+.+..|
T Consensus 36 p~y~~L~~~~~~~l~~~~~~Fl~---------------~K~f~g~~glevtdemkl~IAa~Acll~l~~~~~~y~~~~~I 100 (253)
T PF06167_consen 36 PFYRRLSPEEQRRLRQRVQLFLA---------------EKRFEGCGGLEVTDEMKLLIAAQACLLTLGLGLDWYDGWRTI 100 (253)
T ss_dssp GGGTT--HHHHHHHHHHHHHHHH---------------HSEEEE-TT----HHHHHHHHHHHHGGGTTT-GGGGTT-SEE
T ss_pred HHhhcCCHHHHHHHHHHHHHHhc---------------cCEEEecCCCcCCHHHHHHHHHHHHHHHcCCChhHhCCCcEE
Confidence 35788999999999999998876 6778877 6999999983 22223344433455667899
Q ss_pred ecchhhhccc
Q psy12531 78 ILFHETLYQK 87 (183)
Q Consensus 78 ILfeETl~Q~ 87 (183)
|+|..+++..
T Consensus 101 liYP~~f~~~ 110 (253)
T PF06167_consen 101 LIYPDAFVSP 110 (253)
T ss_dssp EEESS-----
T ss_pred EEeCccccCC
Confidence 9999999854
No 17
>PRK06552 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase; Provisional
Probab=38.83 E-value=85 Score=26.64 Aligned_cols=131 Identities=24% Similarity=0.289 Sum_probs=74.8
Q ss_pred HHHHHHHHHHHHhcCCCceEeecCCCCchHHHhhhcCCCCchhhHHhhh---hhhcccCCCCCCceeeeecchhhhcccc
Q psy12531 12 LQEELKKIAEAIVAPGKGILAADESVSTMGKRLQDIGCENTEEHRRLYR---QLLFTSDKVIGDNISGVILFHETLYQKA 88 (183)
Q Consensus 12 ~~~eL~~ta~~i~a~GKGiLAaDES~gt~~KRl~~iGventeenRr~yR---elL~tt~~~~~~~IsGvILfeETl~Q~~ 88 (183)
..++...+++++++.|=.++ |-+=+.+..++.| ++-++.|+ ++++. .|-|+-.|...+-.
T Consensus 23 ~~~~a~~~~~al~~~Gi~~i---Eit~~~~~a~~~i-----~~l~~~~~~~p~~~vG---------aGTV~~~~~~~~a~ 85 (213)
T PRK06552 23 SKEEALKISLAVIKGGIKAI---EVTYTNPFASEVI-----KELVELYKDDPEVLIG---------AGTVLDAVTARLAI 85 (213)
T ss_pred CHHHHHHHHHHHHHCCCCEE---EEECCCccHHHHH-----HHHHHHcCCCCCeEEe---------eeeCCCHHHHHHHH
Confidence 34577788888888888887 5555555555544 33344443 23433 35678888888766
Q ss_pred cCCCchH----------HHhhhCCce--eeEecCCccccC--CCC------CCccccchhhHHHhhhccCCCCCCceeec
Q psy12531 89 DDGTPFV----------ELLKQRGII--PGIKVDKGVVPL--MGS------EDECTTQAQATVQALQRTVPAAVPGITFL 148 (183)
Q Consensus 89 ~dG~~~~----------~~L~~~GIv--pGIKVDkG~~pL--~g~------~~E~~TqG~~Tv~~l~rtVP~avpGi~FL 148 (183)
+.|-.|. ++.+++||. ||.--..-+.-. .|. +.+ ..|-..++.|+.-+|. +| +.-
T Consensus 86 ~aGA~FivsP~~~~~v~~~~~~~~i~~iPG~~T~~E~~~A~~~Gad~vklFPa~--~~G~~~ik~l~~~~p~-ip--~~a 160 (213)
T PRK06552 86 LAGAQFIVSPSFNRETAKICNLYQIPYLPGCMTVTEIVTALEAGSEIVKLFPGS--TLGPSFIKAIKGPLPQ-VN--VMV 160 (213)
T ss_pred HcCCCEEECCCCCHHHHHHHHHcCCCEECCcCCHHHHHHHHHcCCCEEEECCcc--cCCHHHHHHHhhhCCC-CE--EEE
Confidence 6676543 444566653 332111000000 000 001 1234567888876653 45 457
Q ss_pred cCCCCHHHHHHHhHHH
Q psy12531 149 SGGQSEEEASVNLDAI 164 (183)
Q Consensus 149 SGGqsee~At~~Lnai 164 (183)
+||-+.+.+...|.+=
T Consensus 161 tGGI~~~N~~~~l~aG 176 (213)
T PRK06552 161 TGGVNLDNVKDWFAAG 176 (213)
T ss_pred ECCCCHHHHHHHHHCC
Confidence 8999999999998764
No 18
>PRK15410 DgsA anti-repressor MtfA; Provisional
Probab=37.59 E-value=30 Score=30.75 Aligned_cols=69 Identities=17% Similarity=0.148 Sum_probs=49.3
Q ss_pred CCCCCChHHHHHHHHHHHHHhcCCCceEeecCCCCchHHHhhhc-CCCCchhhHH---hhhh-hhcccCCCCCCceeeee
Q psy12531 4 YFNYPPPALQEELKKIAEAIVAPGKGILAADESVSTMGKRLQDI-GCENTEEHRR---LYRQ-LLFTSDKVIGDNISGVI 78 (183)
Q Consensus 4 ~~~~~~~~~~~eL~~ta~~i~a~GKGiLAaDES~gt~~KRl~~i-GventeenRr---~yRe-lL~tt~~~~~~~IsGvI 78 (183)
+|..|+++.+..|++.++..++ .|+|... |++=|+++|- +.=- +++.-+-..-+.+.+||
T Consensus 27 fy~~Ls~~~~~~L~~~v~~FL~---------------eK~f~G~~glevTdemkv~IAAqAclpiL~lg~~~y~~~~~Il 91 (260)
T PRK15410 27 LLTPLTEQEQQKLVALAERFLQ---------------QKRLVPLQGLELDSLMSARIALLFCLPVLELGIEWLDGFHEVL 91 (260)
T ss_pred HHhcCCHHHHHHHHHHHHHHhc---------------cceEeCCCCceeCHHHHHHHHHHHHHHHhcCCchHhcCCCEEE
Confidence 5778999999999999998776 4666666 7899999982 1111 23332112346788999
Q ss_pred cchhhhccc
Q psy12531 79 LFHETLYQK 87 (183)
Q Consensus 79 LfeETl~Q~ 87 (183)
+|..+++-.
T Consensus 92 vYP~~f~~~ 100 (260)
T PRK15410 92 IYPAPFVVD 100 (260)
T ss_pred EcCcccccC
Confidence 999999743
No 19
>PF03681 UPF0150: Uncharacterised protein family (UPF0150); InterPro: IPR005357 This family of small proteins is uncharacterised. In Q9A3L8 from SWISSPROT this domain is found next to a DNA binding helix-turn-helix domain IPR002145 from INTERPRO, which suggests that this is some kind of ligand binding domain.; PDB: 2DSY_C 2YZT_A 3KWR_A.
Probab=37.56 E-value=26 Score=22.36 Aligned_cols=22 Identities=32% Similarity=0.427 Sum_probs=17.6
Q ss_pred CCCCceeeccCCCCHHHHHHHhHH
Q psy12531 140 AAVPGITFLSGGQSEEEASVNLDA 163 (183)
Q Consensus 140 ~avpGi~FLSGGqsee~At~~Lna 163 (183)
|.+||++ +-|.|.+||..|+..
T Consensus 19 pdlpg~~--t~G~t~eea~~~~~e 40 (48)
T PF03681_consen 19 PDLPGCF--TQGDTLEEALENAKE 40 (48)
T ss_dssp TTCCTCE--EEESSHHHHHHHHHH
T ss_pred CCccChh--hcCCCHHHHHHHHHH
Confidence 4568876 778899999999864
No 20
>PF06738 DUF1212: Protein of unknown function (DUF1212); InterPro: IPR010619 This entry represents a predicted domain found within a number of hypothetical proteins of unknown function found in eukaryotes, bacteria and archaea. Some of these sequences are predicted to be membrane proteins.
Probab=37.13 E-value=11 Score=30.30 Aligned_cols=33 Identities=30% Similarity=0.484 Sum_probs=25.0
Q ss_pred eccCCCCHHHHHHHhHHHhccC-CCCCceeeeec
Q psy12531 147 FLSGGQSEEEASVNLDAINKYS-GKKPWALTFSY 179 (183)
Q Consensus 147 FLSGGqsee~At~~LnaiN~~~-~~~PW~LsFSy 179 (183)
+.+|..|.|||...|++|.+.+ ..+||..-+.|
T Consensus 77 ~~~~~~~~~ea~~~L~~I~~~~~~y~~~~~~l~~ 110 (193)
T PF06738_consen 77 IVAGQLSLEEAIERLDEIDREPPRYPPWLVILAA 110 (193)
T ss_pred HhcCCCCHHHHHHHHHHHhhCCCCCCHHHHHHHH
Confidence 4569999999999999999875 33567554444
No 21
>KOG1749|consensus
Probab=35.56 E-value=22 Score=28.96 Aligned_cols=84 Identities=24% Similarity=0.328 Sum_probs=52.2
Q ss_pred ChHHHHHHHHHHHHH-----hcCCCceEeecCCCCchHHHhhhcCCCCch---hhHHhhhhhhcccCCCCCCceeeeecc
Q psy12531 9 PPALQEELKKIAEAI-----VAPGKGILAADESVSTMGKRLQDIGCENTE---EHRRLYRQLLFTSDKVIGDNISGVILF 80 (183)
Q Consensus 9 ~~~~~~eL~~ta~~i-----~a~GKGiLAaDES~gt~~KRl~~iGvente---enRr~yRelL~tt~~~~~~~IsGvILf 80 (183)
+.++++.+.-||-+- ....|||. |+.||||.-. .-|...|--|+.. ++.|..++-.
T Consensus 24 d~~ykk~~lGta~K~~pfggashAKgIv------------LEKigVEAKQPNSAiRKcvRvQLIkn----gKKITafVp~ 87 (143)
T KOG1749|consen 24 DKHYKKRLLGTAYKSSPFGGASHAKGIV------------LEKIGVEAKQPNSAIRKCVRVQLIKN----GKKITAFVPN 87 (143)
T ss_pred hhhhhhhhhcchhhcCCCCCccccceeE------------EEeeeeeccCCcHHHhhheeeeeeeC----CceEEEEecC
Confidence 445555555555443 34568888 9999999544 4466888777765 6788888887
Q ss_pred hhhhccccc-CCCchHHH---hhhCCceeeEe
Q psy12531 81 HETLYQKAD-DGTPFVEL---LKQRGIIPGIK 108 (183)
Q Consensus 81 eETl~Q~~~-dG~~~~~~---L~~~GIvpGIK 108 (183)
|-.+.--.. |-+.+..+ =...|=||||.
T Consensus 88 dgcln~ieendevlv~gfgrkg~avgdipgvr 119 (143)
T KOG1749|consen 88 DGCLNFIEENDEVLVAGFGRKGHAVGDIPGVR 119 (143)
T ss_pred CCceeeeccCCeeeeeccCccCccccCCCceE
Confidence 776654332 22222221 13667788874
No 22
>PRK07114 keto-hydroxyglutarate-aldolase/keto-deoxy-phosphogluconate aldolase; Provisional
Probab=35.32 E-value=21 Score=30.76 Aligned_cols=119 Identities=19% Similarity=0.194 Sum_probs=70.4
Q ss_pred HHHHHHHHHHhcCCCceEeecCCCCchHHHhhhcCCCCchhhHHhh----hhhhcccCCCCCCceeeeecchhhhccccc
Q psy12531 14 EELKKIAEAIVAPGKGILAADESVSTMGKRLQDIGCENTEEHRRLY----RQLLFTSDKVIGDNISGVILFHETLYQKAD 89 (183)
Q Consensus 14 ~eL~~ta~~i~a~GKGiLAaDES~gt~~KRl~~iGventeenRr~y----RelL~tt~~~~~~~IsGvILfeETl~Q~~~ 89 (183)
++...+++++++-|=.++ |-+=+++..++.| +..|+.| -++++. .|-||-.|+..+-.+
T Consensus 27 ~~a~~~~~al~~gGi~~i---EiT~~tp~a~~~i-----~~l~~~~~~~~p~~~vG---------aGTVl~~e~a~~a~~ 89 (222)
T PRK07114 27 EVAKKVIKACYDGGARVF---EFTNRGDFAHEVF-----AELVKYAAKELPGMILG---------VGSIVDAATAALYIQ 89 (222)
T ss_pred HHHHHHHHHHHHCCCCEE---EEeCCCCcHHHHH-----HHHHHHHHhhCCCeEEe---------eEeCcCHHHHHHHHH
Confidence 466677777777777766 5555555555443 2222222 223333 366899999988777
Q ss_pred CCCchH----------HHhhhCCceeeEecCCccccCCC--CCCccc----------------cchhhHHHhhhccCCCC
Q psy12531 90 DGTPFV----------ELLKQRGIIPGIKVDKGVVPLMG--SEDECT----------------TQAQATVQALQRTVPAA 141 (183)
Q Consensus 90 dG~~~~----------~~L~~~GIvpGIKVDkG~~pL~g--~~~E~~----------------TqG~~Tv~~l~rtVP~a 141 (183)
.|-.|. ++.+++||. -+|| |+.|.. .-|-..++.|+.-.
T Consensus 90 aGA~FiVsP~~~~~v~~~~~~~~i~----------~iPG~~TpsEi~~A~~~Ga~~vKlFPA~~~G~~~ikal~~p~--- 156 (222)
T PRK07114 90 LGANFIVTPLFNPDIAKVCNRRKVP----------YSPGCGSLSEIGYAEELGCEIVKLFPGSVYGPGFVKAIKGPM--- 156 (222)
T ss_pred cCCCEEECCCCCHHHHHHHHHcCCC----------EeCCCCCHHHHHHHHHCCCCEEEECcccccCHHHHHHHhccC---
Confidence 776553 555666663 2233 233211 11245677777544
Q ss_pred CCceeec-cCCCCH--HHHHHHhHH
Q psy12531 142 VPGITFL-SGGQSE--EEASVNLDA 163 (183)
Q Consensus 142 vpGi~FL-SGGqse--e~At~~Lna 163 (183)
|+|-|. +||-+. +.+..+|++
T Consensus 157 -p~i~~~ptGGV~~~~~n~~~yl~a 180 (222)
T PRK07114 157 -PWTKIMPTGGVEPTEENLKKWFGA 180 (222)
T ss_pred -CCCeEEeCCCCCcchhcHHHHHhC
Confidence 455554 799998 789988884
No 23
>TIGR03104 trio_amidotrans asparagine synthase family amidotransferase. Members of this protein family are closely related to several isoforms of asparagine synthetase (glutamine amidotransferase) and typically have been given this name in genome annotation to date. Each is part of a conserved three-gene cassette sparsely distributed across at least twenty different species known so far, including alpha, beta, and gamma Proteobacteria, Mycobacterium, and Prosthecochloris, which is a member of the Chlorobi. The other two members of the cassette are a probable protease and a member of the GNAT family of acetyltransferases.
Probab=34.91 E-value=40 Score=32.53 Aligned_cols=23 Identities=39% Similarity=0.525 Sum_probs=16.2
Q ss_pred hhhccCCCCCCceeeccCCCCHH
Q psy12531 133 ALQRTVPAAVPGITFLSGGQSEE 155 (183)
Q Consensus 133 ~l~rtVP~avpGi~FLSGGqsee 155 (183)
+.++.+..-||=.+|||||...-
T Consensus 252 AV~~rl~sd~pvg~~LSGGlDSs 274 (589)
T TIGR03104 252 AVKRRLVADVPVGVLLSGGLDSS 274 (589)
T ss_pred HHHHHhhcCCceeEEecCCccHH
Confidence 44555667788778999995433
No 24
>cd00532 MGS-like MGS-like domain. This domain composes the whole protein of methylglyoxal synthetase, which catalyzes the enolization of dihydroxyacetone phosphate (DHAP) to produce methylglyoxal. The family also includes the C-terminal domain in carbamoyl phosphate synthetase (CPS) where it catalyzes the last phosphorylation of a coaboxyphosphate intermediate to form the product carbamoyl phosphate and may also play a regulatory role. This family also includes inosine monophosphate cyclohydrolase. The known structures in this family show a common phosphate binding site.
Probab=33.34 E-value=45 Score=24.90 Aligned_cols=40 Identities=18% Similarity=0.236 Sum_probs=33.2
Q ss_pred hHHHHHHHHHHHHHhcCCCceEeecCCCCchHHHhhhcCCCCch
Q psy12531 10 PALQEELKKIAEAIVAPGKGILAADESVSTMGKRLQDIGCENTE 53 (183)
Q Consensus 10 ~~~~~eL~~ta~~i~a~GKGiLAaDES~gt~~KRl~~iGvente 53 (183)
...|+++...|+++...|-.|+| ++.+.+.|+..|++.+.
T Consensus 8 d~~K~~~~~~a~~l~~~G~~i~A----T~gTa~~L~~~Gi~~~~ 47 (112)
T cd00532 8 DHVKAMLVDLAPKLSSDGFPLFA----TGGTSRVLADAGIPVRA 47 (112)
T ss_pred cccHHHHHHHHHHHHHCCCEEEE----CcHHHHHHHHcCCceEE
Confidence 34678999999999999999985 56789999999988443
No 25
>COG5400 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=31.82 E-value=36 Score=29.25 Aligned_cols=113 Identities=25% Similarity=0.344 Sum_probs=69.9
Q ss_pred HHHHHHHHhcCCCceEee-cCCCC-chHHHhhhcCCCCchhhHHhhhhhhcccCCCCCCceeeeecchhhhccccc-CCC
Q psy12531 16 LKKIAEAIVAPGKGILAA-DESVS-TMGKRLQDIGCENTEEHRRLYRQLLFTSDKVIGDNISGVILFHETLYQKAD-DGT 92 (183)
Q Consensus 16 L~~ta~~i~a~GKGiLAa-DES~g-t~~KRl~~iGventeenRr~yRelL~tt~~~~~~~IsGvILfeETl~Q~~~-dG~ 92 (183)
=.-+|+.|+..|.||+-. -++-+ -+.|.|+++|++|-- |+.- ++.+.+|.|+--=|-|||-|.. |.+
T Consensus 46 ~~YtaqEivdagh~FfG~Tsggla~vvEkaF~~yGlPnGY---------ilGe-EGSGAfIaGltYGeG~LytKn~g~h~ 115 (205)
T COG5400 46 QTYTAQEIVDAGHGFFGETSGGLAKVVEKAFQSYGLPNGY---------ILGE-EGSGAFIAGLTYGEGTLYTKNAGDHK 115 (205)
T ss_pred ccccHHHHHHhcccccccccchHHHHHHHHHHhcCCCCce---------Eecc-ccccceEeeeeeccceEEecCCCCcc
Confidence 345789999999999965 34433 356899999999852 4444 7889999998777779997652 222
Q ss_pred chHHHhhhCCceeeEecCCccccCCCCCCccccc---hhhHHHhhhccCCCCCCceeeccCCC
Q psy12531 93 PFVELLKQRGIIPGIKVDKGVVPLMGSEDECTTQ---AQATVQALQRTVPAAVPGITFLSGGQ 152 (183)
Q Consensus 93 ~~~~~L~~~GIvpGIKVDkG~~pL~g~~~E~~Tq---G~~Tv~~l~rtVP~avpGi~FLSGGq 152 (183)
+.|+- |-|-.|-| ..+-.... -.-.+.+|-|..| .|.|-+|+-+|.
T Consensus 116 ----vFWQG---PslGwD~G------GqgsRvmmLvYnL~~v~aly~Ry~-GV~GSAyvVaGv 164 (205)
T COG5400 116 ----VFWQG---PSLGWDWG------GQGSRVMMLVYNLDDVDALYRRYG-GVAGSAYVVAGV 164 (205)
T ss_pred ----eEeeC---CccccccC------CCceEEEEEEecCCCHHHHHhhcC-CccccEEEEeec
Confidence 22321 22222221 11111000 0224677777776 467888888773
No 26
>TIGR00683 nanA N-acetylneuraminate lyase. N-acetylneuraminate lyase is also known as N-acetylneuraminic acid aldolase, sialic acid aldolase, or sialate lyase. It is an intracellular enzyme. The structure of this homotetrameric enzyme related to dihydrodipicolinate synthase is known. In Clostridium tertium, the enzyme appears to be in an operon with a secreted sialidase that releases sialic acid from host sialoglycoconjugates. In several E. coli strains, however, this enzyme is responsible for N-acetyl-D-neuraminic acid synthesis for capsule production by condensing N-acetyl-D-mannosamine and pyruvate.
Probab=31.31 E-value=2.9e+02 Score=24.11 Aligned_cols=100 Identities=14% Similarity=0.214 Sum_probs=58.4
Q ss_pred CCCCChHHHHHHHHHHHHHhcCCCceEee--cCCCC---chHHHhhhcCCC------------CchhhHHhhhhhhcccC
Q psy12531 5 FNYPPPALQEELKKIAEAIVAPGKGILAA--DESVS---TMGKRLQDIGCE------------NTEEHRRLYRQLLFTSD 67 (183)
Q Consensus 5 ~~~~~~~~~~eL~~ta~~i~a~GKGiLAa--DES~g---t~~KRl~~iGve------------nteenRr~yRelL~tt~ 67 (183)
+..||.|.++++.+.+.+.++...-|++- +-|+. ...|+.+..|++ +.++..+-|+++.=.+
T Consensus 48 ~~~Lt~eEr~~~~~~~~~~~~~~~pvi~gv~~~~t~~~i~la~~a~~~Gad~v~v~~P~y~~~~~~~i~~yf~~v~~~~- 126 (290)
T TIGR00683 48 NFMLSTEEKKEIFRIAKDEAKDQIALIAQVGSVNLKEAVELGKYATELGYDCLSAVTPFYYKFSFPEIKHYYDTIIAET- 126 (290)
T ss_pred cccCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHHhCCCEEEEeCCcCCCCCHHHHHHHHHHHHhhC-
Confidence 67899999999999888877644445554 44442 234777888876 5567777888775322
Q ss_pred CCCCCceeeeecchhhhcccccCCCchHHHhhhCCceeeEecC
Q psy12531 68 KVIGDNISGVILFHETLYQKADDGTPFVELLKQRGIIPGIKVD 110 (183)
Q Consensus 68 ~~~~~~IsGvILfeETl~Q~~~dG~~~~~~L~~~GIvpGIKVD 110 (183)
+. ..+|+|+---....+=...+..-|.+..-|.|||--
T Consensus 127 ~~-----lpv~lYn~P~~tg~~l~~~~i~~L~~~pnv~giK~s 164 (290)
T TIGR00683 127 GG-----LNMIVYSIPFLTGVNMGIEQFGELYKNPKVLGVKFT 164 (290)
T ss_pred CC-----CCEEEEeCccccccCcCHHHHHHHhcCCCEEEEEeC
Confidence 11 235666543211111111122333355667799974
No 27
>COG0367 AsnB Asparagine synthase (glutamine-hydrolyzing) [Amino acid transport and metabolism]
Probab=29.88 E-value=63 Score=31.16 Aligned_cols=35 Identities=29% Similarity=0.246 Sum_probs=25.9
Q ss_pred hhhccCCCCCCceeeccCCCCHHHHHHHhHHHhcc
Q psy12531 133 ALQRTVPAAVPGITFLSGGQSEEEASVNLDAINKY 167 (183)
Q Consensus 133 ~l~rtVP~avpGi~FLSGGqsee~At~~LnaiN~~ 167 (183)
+.++.+=+.||..+|||||.......+.+...+..
T Consensus 222 sV~~r~~advpvg~~lSGGlDSS~Iaa~a~~~~~~ 256 (542)
T COG0367 222 AVKRRLVADVPVGVFLSGGLDSSLIAAIAAEELGK 256 (542)
T ss_pred HHHHHhccCCcEEEEeCCCccHHHHHHHHHHhccc
Confidence 34444456788899999998877777777777653
No 28
>PRK03170 dihydrodipicolinate synthase; Provisional
Probab=29.47 E-value=2.7e+02 Score=23.95 Aligned_cols=99 Identities=18% Similarity=0.124 Sum_probs=57.7
Q ss_pred CCCCCChHHHHHHHHHHHHHhcCCCceEee--cCCCCch---HHHhhhcCCC------------CchhhHHhhhhhhccc
Q psy12531 4 YFNYPPPALQEELKKIAEAIVAPGKGILAA--DESVSTM---GKRLQDIGCE------------NTEEHRRLYRQLLFTS 66 (183)
Q Consensus 4 ~~~~~~~~~~~eL~~ta~~i~a~GKGiLAa--DES~gt~---~KRl~~iGve------------nteenRr~yRelL~tt 66 (183)
-++.||.+.+.++.+.+.+.++...-|++. ..|+..+ .++.+..|+. +.++..+-|+++.=.+
T Consensus 47 E~~~ls~~Er~~~~~~~~~~~~~~~~vi~gv~~~~~~~~i~~a~~a~~~G~d~v~~~pP~~~~~~~~~i~~~~~~ia~~~ 126 (292)
T PRK03170 47 ESPTLTHEEHEELIRAVVEAVNGRVPVIAGTGSNSTAEAIELTKFAEKAGADGALVVTPYYNKPTQEGLYQHFKAIAEAT 126 (292)
T ss_pred ccccCCHHHHHHHHHHHHHHhCCCCcEEeecCCchHHHHHHHHHHHHHcCCCEEEECCCcCCCCCHHHHHHHHHHHHhcC
Confidence 367899999999999888887655566665 5454332 3566777776 4566667787765222
Q ss_pred CCCCCCceeeeecchhhhcccccCCCchHHHhhhCCceeeEec
Q psy12531 67 DKVIGDNISGVILFHETLYQKADDGTPFVELLKQRGIIPGIKV 109 (183)
Q Consensus 67 ~~~~~~~IsGvILfeETl~Q~~~dG~~~~~~L~~~GIvpGIKV 109 (183)
. ..+|+|+---.-..+=-..+..-|.+..=|.|||-
T Consensus 127 ----~---~pv~lYn~P~~~g~~l~~~~~~~L~~~p~v~giK~ 162 (292)
T PRK03170 127 ----D---LPIILYNVPGRTGVDILPETVARLAEHPNIVGIKE 162 (292)
T ss_pred ----C---CCEEEEECccccCCCCCHHHHHHHHcCCCEEEEEE
Confidence 1 25677753211011001122333344455779995
No 29
>PF14337 DUF4393: Domain of unknown function (DUF4393)
Probab=29.23 E-value=45 Score=26.87 Aligned_cols=76 Identities=24% Similarity=0.229 Sum_probs=60.6
Q ss_pred CchHHHhhhcCCC-CchhhHHhhhhhhcccCCCCCCceeeeecchhhhcccccCCCchHHHhhhCCceeeEecCCccc
Q psy12531 38 STMGKRLQDIGCE-NTEEHRRLYRQLLFTSDKVIGDNISGVILFHETLYQKADDGTPFVELLKQRGIIPGIKVDKGVV 114 (183)
Q Consensus 38 gt~~KRl~~iGve-nteenRr~yRelL~tt~~~~~~~IsGvILfeETl~Q~~~dG~~~~~~L~~~GIvpGIKVDkG~~ 114 (183)
.-..+.|++...+ +.|+-|..|=.+|.++ -.....-.-.=.|-+.+.|-+.+--.+-++|...+..|.+.+-....
T Consensus 17 ~i~~p~le~~~~~~~~e~Lremfa~LLass-~d~~~~~~~hp~fv~Ii~qLsp~EA~iL~~l~~~~~~p~~~~~~~~~ 93 (186)
T PF14337_consen 17 KIAGPALEAASYEIDDEELREMFANLLASS-MDKRKNDDVHPSFVEIIKQLSPDEARILKYLYDNNQIPIVDVRLRRK 93 (186)
T ss_pred hhhHHHHHhccCcCCcHHHHHHHHHHHHHH-hCcCccccccHHHHHHHHhCCHHHHHHHHHHHhcCCCcceeeeeeec
Confidence 3347889988888 8899999999999887 34444334456899999999999988999999999999998866543
No 30
>smart00027 EH Eps15 homology domain. Pair of EF hand motifs that recognise proteins containing Asn-Pro-Phe (NPF) sequences.
Probab=29.16 E-value=1.1e+02 Score=21.95 Aligned_cols=41 Identities=12% Similarity=0.147 Sum_probs=33.2
Q ss_pred CCChHHHHHHHHHHHHHhcCCCceEeecCCCCchHHHhhhcCCCC
Q psy12531 7 YPPPALQEELKKIAEAIVAPGKGILAADESVSTMGKRLQDIGCEN 51 (183)
Q Consensus 7 ~~~~~~~~eL~~ta~~i~a~GKGiLAaDES~gt~~KRl~~iGven 51 (183)
++|+++.+++...=+.+=..++|.|..+| +.+.|...|+++
T Consensus 3 ~ls~~~~~~l~~~F~~~D~d~~G~Is~~e----l~~~l~~~~~~~ 43 (96)
T smart00027 3 AISPEDKAKYEQIFRSLDKNQDGTVTGAQ----AKPILLKSGLPQ 43 (96)
T ss_pred CCCHHHHHHHHHHHHHhCCCCCCeEeHHH----HHHHHHHcCCCH
Confidence 46889999999999998899999996655 677777777643
No 31
>PRK03620 5-dehydro-4-deoxyglucarate dehydratase; Provisional
Probab=26.73 E-value=3.6e+02 Score=23.62 Aligned_cols=96 Identities=16% Similarity=0.145 Sum_probs=56.9
Q ss_pred CCCCCChHHHHHHHHHHHHHhcCCCceEee-cCCCC---chHHHhhhcCCC------------CchhhHHhhhhhhcccC
Q psy12531 4 YFNYPPPALQEELKKIAEAIVAPGKGILAA-DESVS---TMGKRLQDIGCE------------NTEEHRRLYRQLLFTSD 67 (183)
Q Consensus 4 ~~~~~~~~~~~eL~~ta~~i~a~GKGiLAa-DES~g---t~~KRl~~iGve------------nteenRr~yRelL~tt~ 67 (183)
-++.||.|.+.++.+.+.+.+....-++|- ..|+. ...|+.+..|+. +.++-.+-||++.=.++
T Consensus 53 E~~~Lt~eEr~~~~~~~~~~~~~~~pvi~gv~~~t~~~i~~~~~a~~~Gadav~~~pP~y~~~~~~~i~~~f~~va~~~~ 132 (303)
T PRK03620 53 EFFSLTPDEYSQVVRAAVETTAGRVPVIAGAGGGTAQAIEYAQAAERAGADGILLLPPYLTEAPQEGLAAHVEAVCKSTD 132 (303)
T ss_pred CcccCCHHHHHHHHHHHHHHhCCCCcEEEecCCCHHHHHHHHHHHHHhCCCEEEECCCCCCCCCHHHHHHHHHHHHHhCC
Confidence 378899999999988888777655556654 21332 133677777876 44566667777643221
Q ss_pred CCCCCceeeeecchhhhcccccCCCchHHHhh-hCCceeeEec
Q psy12531 68 KVIGDNISGVILFHETLYQKADDGTPFVELLK-QRGIIPGIKV 109 (183)
Q Consensus 68 ~~~~~~IsGvILfeETl~Q~~~dG~~~~~~L~-~~GIvpGIKV 109 (183)
..||+|+-| ..+=...+...|. +..-|.|||-
T Consensus 133 -------lpi~lYn~~---g~~l~~~~l~~L~~~~pni~giK~ 165 (303)
T PRK03620 133 -------LGVIVYNRD---NAVLTADTLARLAERCPNLVGFKD 165 (303)
T ss_pred -------CCEEEEcCC---CCCCCHHHHHHHHhhCCCEEEEEe
Confidence 347888733 1111111223333 5556779996
No 32
>COG4396 Mu-like prophage host-nuclease inhibitor protein Gam [General function prediction only]
Probab=26.61 E-value=26 Score=29.21 Aligned_cols=16 Identities=44% Similarity=0.777 Sum_probs=13.6
Q ss_pred hCCceeeEecCCccccC
Q psy12531 100 QRGIIPGIKVDKGVVPL 116 (183)
Q Consensus 100 ~~GIvpGIKVDkG~~pL 116 (183)
.+| |+|||+.+|+...
T Consensus 145 ~kG-iaGiki~~G~EdF 160 (170)
T COG4396 145 SKG-IAGIKIVSGVEDF 160 (170)
T ss_pred hcC-CCceeeeccchhh
Confidence 578 7999999999765
No 33
>cd00954 NAL N-Acetylneuraminic acid aldolase, also called N-acetylneuraminate lyase (NAL), which catalyses the reversible aldol reaction of N-acetyl-D-mannosamine and pyruvate to give N-acetyl-D-neuraminic acid (D-sialic acid). It has a widespread application as biocatalyst for the synthesis of sialic acid and its derivatives. This enzyme has been shown to be quite specific for pyruvate as the donor, but flexible to a variety of D- and, to some extent, L-hexoses and pentoses as acceptor substrates. NAL is member of dihydrodipicolinate synthase family that comprises several pyruvate-dependent class I aldolases.
Probab=24.12 E-value=4e+02 Score=23.03 Aligned_cols=101 Identities=13% Similarity=0.163 Sum_probs=57.2
Q ss_pred CCCCCChHHHHHHHHHHHHHhcCCCceEee--cCCCC---chHHHhhhcCCC------------CchhhHHhhhhhhccc
Q psy12531 4 YFNYPPPALQEELKKIAEAIVAPGKGILAA--DESVS---TMGKRLQDIGCE------------NTEEHRRLYRQLLFTS 66 (183)
Q Consensus 4 ~~~~~~~~~~~eL~~ta~~i~a~GKGiLAa--DES~g---t~~KRl~~iGve------------nteenRr~yRelL~tt 66 (183)
-++.||.+.+.++.+.+..-+....-++|- +.|+. ...+..+..|+. +.++-.+-|+++.=.+
T Consensus 47 E~~~Lt~~Er~~~~~~~~~~~~~~~~viagv~~~~~~~ai~~a~~a~~~Gad~v~~~~P~y~~~~~~~i~~~~~~v~~a~ 126 (288)
T cd00954 47 EGFLLSVEERKQIAEIVAEAAKGKVTLIAHVGSLNLKESQELAKHAEELGYDAISAITPFYYKFSFEEIKDYYREIIAAA 126 (288)
T ss_pred CcccCCHHHHHHHHHHHHHHhCCCCeEEeccCCCCHHHHHHHHHHHHHcCCCEEEEeCCCCCCCCHHHHHHHHHHHHHhc
Confidence 468899999999998888877654566663 45542 234666777765 4566667777765323
Q ss_pred CCCCCCceeeeecchhhhcccccCCCchHHHhhhCCceeeEecC
Q psy12531 67 DKVIGDNISGVILFHETLYQKADDGTPFVELLKQRGIIPGIKVD 110 (183)
Q Consensus 67 ~~~~~~~IsGvILfeETl~Q~~~dG~~~~~~L~~~GIvpGIKVD 110 (183)
|+ ..+|+|+---.-..+=...+..-|.+..=|.|||.-
T Consensus 127 -~~-----lpi~iYn~P~~tg~~l~~~~~~~L~~~pnivgiK~s 164 (288)
T cd00954 127 -AS-----LPMIIYHIPALTGVNLTLEQFLELFEIPNVIGVKFT 164 (288)
T ss_pred -CC-----CCEEEEeCccccCCCCCHHHHHHHhcCCCEEEEEeC
Confidence 11 235666543211111011122233344556699974
No 34
>PF01386 Ribosomal_L25p: Ribosomal L25p family; InterPro: IPR020055 Ribosomes are the particles that catalyse mRNA-directed protein synthesis in all organisms. The codons of the mRNA are exposed on the ribosome to allow tRNA binding. This leads to the incorporation of amino acids into the growing polypeptide chain in accordance with the genetic information. Incoming amino acid monomers enter the ribosomal A site in the form of aminoacyl-tRNAs complexed with elongation factor Tu (EF-Tu) and GTP. The growing polypeptide chain, situated in the P site as peptidyl-tRNA, is then transferred to aminoacyl-tRNA and the new peptidyl-tRNA, extended by one residue, is translocated to the P site with the aid the elongation factor G (EF-G) and GTP as the deacylated tRNA is released from the ribosome through one or more exit sites [, ]. About 2/3 of the mass of the ribosome consists of RNA and 1/3 of protein. The proteins are named in accordance with the subunit of the ribosome which they belong to - the small (S1 to S31) and the large (L1 to L44). Usually they decorate the rRNA cores of the subunits. Many ribosomal proteins, particularly those of the large subunit, are composed of a globular, surfaced-exposed domain with long finger-like projections that extend into the rRNA core to stabilise its structure. Most of the proteins interact with multiple RNA elements, often from different domains. In the large subunit, about 1/3 of the 23S rRNA nucleotides are at least in van der Waal's contact with protein, and L22 interacts with all six domains of the 23S rRNA. Proteins S4 and S7, which initiate assembly of the 16S rRNA, are located at junctions of five and four RNA helices, respectively. In this way proteins serve to organise and stabilise the rRNA tertiary structure. While the crucial activities of decoding and peptide transfer are RNA based, proteins play an active role in functions that may have evolved to streamline the process of protein synthesis. In addition to their function in the ribosome, many ribosomal proteins have some function 'outside' the ribosome [, ]. This entry models the short-form of the ribosomal L25 protein. The long-form has homology to the general stress protein Ctc of Bacillus subtilis, a mesophile, and ribosomal protein TL5 of Thermus thermophilus, a thermophile. Ribosomal protein L25 of Escherichia coli and Haemophilus influenzae appear to be orthologous but consist only of the N-terminal half of Ctc and TL5. Both short (L25-like) and full-length (CTC-like) members of this family bind the E-loop of bacterial 5S rRNA.; GO: 0003735 structural constituent of ribosome, 0008097 5S rRNA binding, 0006412 translation, 0005622 intracellular, 0005840 ribosome; PDB: 2HGQ_Y 2HGJ_Y 2Y19_Z 2WRL_Z 3KIT_Z 2WH2_Z 2WDN_Z 3V25_Z 3HUZ_Z 3KIY_Z ....
Probab=24.11 E-value=77 Score=23.09 Aligned_cols=29 Identities=24% Similarity=0.464 Sum_probs=22.4
Q ss_pred cccCCCchHHHhhhCCceeeEecCCcccc
Q psy12531 87 KADDGTPFVELLKQRGIIPGIKVDKGVVP 115 (183)
Q Consensus 87 ~~~dG~~~~~~L~~~GIvpGIKVDkG~~p 115 (183)
++.-|+.-+.-|++.|.||||=--+|..+
T Consensus 6 R~~~gk~~~r~LR~~G~iPaviYG~~~~~ 34 (88)
T PF01386_consen 6 REETGKSAARRLRREGKIPAVIYGKGKES 34 (88)
T ss_dssp SSSTSSSHHHHHHHTTEEEEEEEESSEEE
T ss_pred cCcCCCHHHHHHHHcCCceEEEECCCCCC
Confidence 34568888999999999999966555443
No 35
>cd02847 Chitobiase_C_term Chitobiase C-terminus domain. Chitobiase (AKA N-acetylglucosaminidase) digests the beta, 1-4 glycosidic bonds of the N-acetylglucosamine (NAG) oligomers found in chitin, an important structural element of fungal cell wall and arthropod exoskeletons. It is thought to proceed through an acid-base reaction mechanism, in which one protein carboxylate acts as catalytic acid, while the nucleophile is the polar acetamido group of the sugar in a substrate-assisted reaction with retention of the anomeric configuration. The C-terminus of chitobiase may be related to the immunoglobulin and/or fibronectin type III superfamilies. These domains are associated with different types of catalytic domains at either the N-terminal or C-terminal end and may be involved in homodimeric/tetrameric/dodecameric interactions. Members of this family include members of the alpha amylase family, sialidase, galactose oxidase, cellulase, cellulose, hyaluronate lyase, chitobiase, and chit
Probab=23.63 E-value=36 Score=24.89 Aligned_cols=43 Identities=23% Similarity=0.359 Sum_probs=26.3
Q ss_pred eeeEecCCccc----cCCCCCCccccchhhHHHhhhccCCCCCCcee
Q psy12531 104 IPGIKVDKGVV----PLMGSEDECTTQAQATVQALQRTVPAAVPGIT 146 (183)
Q Consensus 104 vpGIKVDkG~~----pL~g~~~E~~TqG~~Tv~~l~rtVP~avpGi~ 146 (183)
+||.+++.|.. ++||..-|-++.|..+=......+|+.|.|.+
T Consensus 14 ~pga~i~~g~l~~n~~~pg~~i~Yt~dgg~~w~~Y~~p~~~~v~~~v 60 (78)
T cd02847 14 VPGAKVENGKLEMNVSLPGLTLQYSTDGGKNWNIYDAAAKPVVSGDV 60 (78)
T ss_pred CCCeEEEcCEEEEeccCCCcEEEEEecCCccCeeccccccccccccE
Confidence 78889988874 67888877777763222223333445555443
No 36
>cd00952 CHBPH_aldolase Trans-o-hydroxybenzylidenepyruvate hydratase-aldolase (HBPHA) and trans-2'-carboxybenzalpyruvate hydratase-aldolase (CBPHA). HBPHA catalyzes HBP to salicyaldehyde and pyruvate. This reaction is part of the degradative pathways for naphthalene and naphthalenesulfonates by bacteria. CBPHA is homologous to HBPHA and catalyzes the cleavage of CBP to 2-carboxylbenzaldehyde and pyruvate during the degradation of phenanthrene. They are member of the DHDPS family of Schiff-base-dependent class I aldolases.
Probab=23.12 E-value=4.5e+02 Score=23.15 Aligned_cols=99 Identities=12% Similarity=0.068 Sum_probs=56.5
Q ss_pred CCCCChHHHHHHHHHHHHHhcCCCceEee--cCCCCc---hHHHhhhcCCC------------CchhhHHhhhhhhcccC
Q psy12531 5 FNYPPPALQEELKKIAEAIVAPGKGILAA--DESVST---MGKRLQDIGCE------------NTEEHRRLYRQLLFTSD 67 (183)
Q Consensus 5 ~~~~~~~~~~eL~~ta~~i~a~GKGiLAa--DES~gt---~~KRl~~iGve------------nteenRr~yRelL~tt~ 67 (183)
++.||.|.+.++.+.+...++...-+++- ..|+.. ..++.+..|+. +.++...-||++.=.++
T Consensus 55 ~~~Lt~eEr~~v~~~~~~~~~grvpvi~Gv~~~~t~~ai~~a~~A~~~Gad~vlv~~P~y~~~~~~~l~~yf~~va~a~~ 134 (309)
T cd00952 55 CATLTWEEKQAFVATVVETVAGRVPVFVGATTLNTRDTIARTRALLDLGADGTMLGRPMWLPLDVDTAVQFYRDVAEAVP 134 (309)
T ss_pred chhCCHHHHHHHHHHHHHHhCCCCCEEEEeccCCHHHHHHHHHHHHHhCCCEEEECCCcCCCCCHHHHHHHHHHHHHhCC
Confidence 67899999999999888887655556654 445432 23666777876 55666667777653331
Q ss_pred CCCCCceeeeecchhhhcccccCCCchHHHhhhCCceeeEec
Q psy12531 68 KVIGDNISGVILFHETLYQKADDGTPFVELLKQRGIIPGIKV 109 (183)
Q Consensus 68 ~~~~~~IsGvILfeETl~Q~~~dG~~~~~~L~~~GIvpGIKV 109 (183)
. ..+|+|+---....+=-..+..-|.+..-|.|||-
T Consensus 135 -~-----lPv~iYn~P~~tg~~l~~~~l~~L~~~pnivgiKd 170 (309)
T cd00952 135 -E-----MAIAIYANPEAFKFDFPRAAWAELAQIPQVVAAKY 170 (309)
T ss_pred -C-----CcEEEEcCchhcCCCCCHHHHHHHhcCCCEEEEEe
Confidence 1 23566653211111111122333334455668886
No 37
>cd00951 KDGDH 5-dehydro-4-deoxyglucarate dehydratase, also called 5-keto-4-deoxy-glucarate dehydratase (KDGDH), which is member of dihydrodipicolinate synthase (DHDPS) family that comprises several pyruvate-dependent class I aldolases. The enzyme is involved in glucarate metabolism, and its mechanism presumbly involves a Schiff-base intermediate similar to members of DHDPS family. While in the case of Pseudomonas sp. 5-dehydro-4-deoxy-D-glucarate is degraded by KDGDH to 2,5-dioxopentanoate, in certain species of Enterobacteriaceae it is degraded instead to pyruvate and glycerate.
Probab=22.37 E-value=5.1e+02 Score=22.47 Aligned_cols=96 Identities=17% Similarity=0.136 Sum_probs=54.8
Q ss_pred CCCCCChHHHHHHHHHHHHHhcCCCceEee-cCCCC---chHHHhhhcCCC------------CchhhHHhhhhhhcccC
Q psy12531 4 YFNYPPPALQEELKKIAEAIVAPGKGILAA-DESVS---TMGKRLQDIGCE------------NTEEHRRLYRQLLFTSD 67 (183)
Q Consensus 4 ~~~~~~~~~~~eL~~ta~~i~a~GKGiLAa-DES~g---t~~KRl~~iGve------------nteenRr~yRelL~tt~ 67 (183)
-++.||.|.+.+|.+.+.+.++...=++|- --|+. .+.|+.+..|++ +.++-.+-||++.=.++
T Consensus 46 E~~~Ls~eEr~~l~~~~~~~~~~~~pvi~gv~~~t~~~i~~a~~a~~~Gad~v~~~pP~y~~~~~~~i~~~f~~v~~~~~ 125 (289)
T cd00951 46 EFFSLTPDEYAQVVRAAVEETAGRVPVLAGAGYGTATAIAYAQAAEKAGADGILLLPPYLTEAPQEGLYAHVEAVCKSTD 125 (289)
T ss_pred CcccCCHHHHHHHHHHHHHHhCCCCCEEEecCCCHHHHHHHHHHHHHhCCCEEEECCCCCCCCCHHHHHHHHHHHHhcCC
Confidence 368899999999998888877654444543 11332 234677777876 44566677887743221
Q ss_pred CCCCCceeeeecchhhhcccccCCCchHHHhhh-CCceeeEec
Q psy12531 68 KVIGDNISGVILFHETLYQKADDGTPFVELLKQ-RGIIPGIKV 109 (183)
Q Consensus 68 ~~~~~~IsGvILfeETl~Q~~~dG~~~~~~L~~-~GIvpGIKV 109 (183)
.-+|+|.-| . .+=...+..-|.+ ..=|.|||-
T Consensus 126 -------~pi~lYn~~--g-~~l~~~~l~~L~~~~pnivgiKd 158 (289)
T cd00951 126 -------LGVIVYNRA--N-AVLTADSLARLAERCPNLVGFKD 158 (289)
T ss_pred -------CCEEEEeCC--C-CCCCHHHHHHHHhcCCCEEEEEe
Confidence 346788721 1 1111112233334 445669985
No 38
>cd03030 GRX_SH3BGR Glutaredoxin (GRX) family, SH3BGR (SH3 domain binding glutamic acid-rich protein) subfamily; a recently-identified subfamily composed of SH3BGR and similar proteins possessing significant sequence similarity to GRX, but without a redox active CXXC motif. The SH3BGR gene was cloned in an effort to identify genes mapping to chromosome 21, which could be involved in the pathogenesis of congenital heart disease affecting Down syndrome newborns. Several human SH3BGR-like (SH3BGRL) genes have been identified since, mapping to different locations in the chromosome. Of these, SH3BGRL3 was identified as a tumor necrosis factor (TNF) alpha inhibitory protein and was also named TIP-B1. Upregulation of expression of SH3BGRL3 is associated with differentiation. It has been suggested that it functions as a regulator of differentiation-related signal transduction pathways.
Probab=21.77 E-value=49 Score=24.56 Aligned_cols=34 Identities=15% Similarity=0.208 Sum_probs=26.5
Q ss_pred hhhcCCCCchhhHHhhhhhhc-----ccCCCC---CCceeee
Q psy12531 44 LQDIGCENTEEHRRLYRQLLF-----TSDKVI---GDNISGV 77 (183)
Q Consensus 44 l~~iGventeenRr~yRelL~-----tt~~~~---~~~IsGv 77 (183)
|+.+.|...++.|..||++.= .++|.+ ++||+|.
T Consensus 33 f~eiDI~~d~~~r~em~~~~~~~~g~~tvPQIFi~~~~iGg~ 74 (92)
T cd03030 33 FEEVDISMNEENRQWMRENVPNENGKPLPPQIFNGDEYCGDY 74 (92)
T ss_pred eEEEecCCCHHHHHHHHHhcCCCCCCCCCCEEEECCEEeeCH
Confidence 888999999999999998863 355643 5788886
No 39
>COG0505 CarA Carbamoylphosphate synthase small subunit [Amino acid transport and metabolism / Nucleotide transport and metabolism]
Probab=21.45 E-value=78 Score=29.78 Aligned_cols=35 Identities=23% Similarity=0.298 Sum_probs=24.3
Q ss_pred Cceeeeecchhhhcccc-cCCCchHHHhhhCCceeeE
Q psy12531 72 DNISGVILFHETLYQKA-DDGTPFVELLKQRGIIPGI 107 (183)
Q Consensus 72 ~~IsGvILfeETl~Q~~-~dG~~~~~~L~~~GIvpGI 107 (183)
-++.|+|..|-+...+. .....+.++|+++||+ ||
T Consensus 74 i~~~G~vvre~~~~~Sn~ra~~sL~~~Lk~~gip-gI 109 (368)
T COG0505 74 IHAAGLVVRELSERPSNWRATESLDEYLKEEGIP-GI 109 (368)
T ss_pred ceEEEEEEcccccccCccccccCHHHHHHHcCCC-ce
Confidence 35789998888766442 3456788888888874 44
No 40
>TIGR00674 dapA dihydrodipicolinate synthase. Dihydrodipicolinate synthase is a homotetrameric enzyme of lysine biosynthesis. E. coli has several paralogs closely related to dihydrodipicoline synthase (DapA), as well as the more distant N-acetylneuraminate lyase. In Pyrococcus horikoshii, the bidirectional best hit with E. coli is to an uncharacterized paralog of DapA, not DapA itself, and it is omitted from the seed. The putative members from the Chlamydias (pathogens with a parasitic metabolism) are easily the most divergent members of the multiple alignment.
Probab=21.08 E-value=4.7e+02 Score=22.45 Aligned_cols=60 Identities=10% Similarity=0.163 Sum_probs=41.1
Q ss_pred CCCCCChHHHHHHHHHHHHHhcCCCceEee--cCCCCc---hHHHhhhcCCC------------CchhhHHhhhhhh
Q psy12531 4 YFNYPPPALQEELKKIAEAIVAPGKGILAA--DESVST---MGKRLQDIGCE------------NTEEHRRLYRQLL 63 (183)
Q Consensus 4 ~~~~~~~~~~~eL~~ta~~i~a~GKGiLAa--DES~gt---~~KRl~~iGve------------nteenRr~yRelL 63 (183)
-++.||.++++++.+++.+.++...=+++- +.|+.. ..++.+..|+. +.++..+-|+++.
T Consensus 44 E~~~Ls~~Er~~~~~~~~~~~~~~~~vi~gv~~~s~~~~i~~a~~a~~~Gad~v~v~pP~y~~~~~~~i~~~~~~i~ 120 (285)
T TIGR00674 44 ESPTLSHEEHKKVIEFVVDLVNGRVPVIAGTGSNATEEAISLTKFAEDVGADGFLVVTPYYNKPTQEGLYQHFKAIA 120 (285)
T ss_pred ccccCCHHHHHHHHHHHHHHhCCCCeEEEeCCCccHHHHHHHHHHHHHcCCCEEEEcCCcCCCCCHHHHHHHHHHHH
Confidence 367899999999999888877643445554 555533 44667777876 4556667777764
No 41
>PRK02228 V-type ATP synthase subunit F; Provisional
Probab=21.02 E-value=1.5e+02 Score=22.09 Aligned_cols=55 Identities=18% Similarity=0.308 Sum_probs=34.0
Q ss_pred CchhhHHhhhhhhcccCCCCCCceeeeecchhhhcccccCCCchHHHhhhCCceeeEecCCccccCCCCCC
Q psy12531 51 NTEEHRRLYRQLLFTSDKVIGDNISGVILFHETLYQKADDGTPFVELLKQRGIIPGIKVDKGVVPLMGSED 121 (183)
Q Consensus 51 nteenRr~yRelL~tt~~~~~~~IsGvILfeETl~Q~~~dG~~~~~~L~~~GIvpGIKVDkG~~pL~g~~~ 121 (183)
+.+|-++.+++++-. + + -|+|+-.|.+++.-++ -.+.+.++...|=| +++||.++
T Consensus 28 ~~ee~~~~l~~l~~~--~---d--~gII~Ite~~~~~i~e---~i~~~~~~~~~P~i------i~IP~~~~ 82 (100)
T PRK02228 28 DDEKLDEAVEEVLED--D---D--VGILVMHDDDLEKLPR---RLRRTLEESVEPTV------VTLGGGGG 82 (100)
T ss_pred CHHHHHHHHHHHhhC--C---C--EEEEEEehhHhHhhHH---HHHHHHhcCCCCEE------EEECCCcc
Confidence 446777888886532 2 2 5899999999986422 12233355566554 57777544
No 42
>PRK04147 N-acetylneuraminate lyase; Provisional
Probab=20.73 E-value=4.8e+02 Score=22.55 Aligned_cols=99 Identities=13% Similarity=0.154 Sum_probs=54.8
Q ss_pred CCCCCChHHHHHHHHHHHHHhcCCCceEee--cCCCC---chHHHhhhcCCC------------CchhhHHhhhhhhccc
Q psy12531 4 YFNYPPPALQEELKKIAEAIVAPGKGILAA--DESVS---TMGKRLQDIGCE------------NTEEHRRLYRQLLFTS 66 (183)
Q Consensus 4 ~~~~~~~~~~~eL~~ta~~i~a~GKGiLAa--DES~g---t~~KRl~~iGve------------nteenRr~yRelL~tt 66 (183)
-+..||.+.+.++.+.+.+.+....=++|- +.|+. ...|..++.|+. +.++..+-|+++.=.+
T Consensus 50 E~~~Ls~eEr~~~~~~~~~~~~~~~~viagvg~~~t~~ai~~a~~a~~~Gad~v~v~~P~y~~~~~~~l~~~f~~va~a~ 129 (293)
T PRK04147 50 EAFLLSTEEKKQVLEIVAEEAKGKVKLIAQVGSVNTAEAQELAKYATELGYDAISAVTPFYYPFSFEEICDYYREIIDSA 129 (293)
T ss_pred ccccCCHHHHHHHHHHHHHHhCCCCCEEecCCCCCHHHHHHHHHHHHHcCCCEEEEeCCcCCCCCHHHHHHHHHHHHHhC
Confidence 467899999999998888877643445553 33332 234677777875 4456666777664222
Q ss_pred CCCCCCceeeeecchhhhcccccCCCchHHHhhhCCceeeEec
Q psy12531 67 DKVIGDNISGVILFHETLYQKADDGTPFVELLKQRGIIPGIKV 109 (183)
Q Consensus 67 ~~~~~~~IsGvILfeETl~Q~~~dG~~~~~~L~~~GIvpGIKV 109 (183)
+ .-||+|+---....+=-..+..-|.+..=|.|||-
T Consensus 130 ~-------lPv~iYn~P~~tg~~l~~~~l~~L~~~pnvvgiK~ 165 (293)
T PRK04147 130 D-------NPMIVYNIPALTGVNLSLDQFNELFTLPKVIGVKQ 165 (293)
T ss_pred C-------CCEEEEeCchhhccCCCHHHHHHHhcCCCEEEEEe
Confidence 1 14667763321111001112233334444569997
Done!