Query psy12531
Match_columns 183
No_of_seqs 157 out of 682
Neff 4.3
Searched_HMMs 29240
Date Fri Aug 16 21:43:20 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy12531.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/12531hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3kx6_A Fructose-bisphosphate a 100.0 2.3E-85 7.7E-90 588.0 15.3 176 6-183 24-324 (379)
2 3mbd_A Fructose-bisphosphate a 100.0 3.1E-85 1.1E-89 581.4 14.4 175 6-183 4-301 (342)
3 3bv4_A Fructose-bisphosphate a 100.0 3.9E-84 1.3E-88 575.1 16.2 178 6-183 2-302 (341)
4 2pc4_A 41 kDa antigen, fructos 100.0 4.7E-84 1.6E-88 579.0 16.0 181 1-183 5-312 (369)
5 2qap_A Fructose-1,6-bisphospha 100.0 5E-84 1.7E-88 581.8 16.0 182 1-183 30-335 (391)
6 3mmt_A Fructose-bisphosphate a 100.0 6E-84 2.1E-88 574.0 12.7 172 11-183 4-301 (347)
7 2iqt_A Fructose-bisphosphate a 100.0 4.1E-66 1.4E-70 452.4 7.4 157 18-183 6-266 (296)
8 2lmt_A Calmodulin-related prot 67.1 14 0.00049 26.3 6.0 48 5-56 1-48 (148)
9 1j7q_A CAVP, calcium vector pr 63.1 17 0.00058 23.4 5.3 56 4-63 4-59 (86)
10 1wdc_C Scallop myosin; calcium 57.3 26 0.00088 24.5 5.8 65 6-82 1-67 (156)
11 3i5g_B Myosin regulatory light 54.7 15 0.0005 27.1 4.2 48 6-57 8-55 (153)
12 3i5g_C Myosin catalytic light 53.3 28 0.00094 25.7 5.6 67 6-84 1-69 (159)
13 3khi_A Putative metal-dependen 50.1 13 0.00043 32.0 3.6 69 3-86 28-101 (267)
14 2ovk_B RLC, myosin regulatory 49.3 23 0.00078 24.8 4.4 49 4-56 6-54 (153)
15 2lhi_A Calmodulin, serine/thre 49.1 10 0.00035 28.5 2.6 47 6-56 3-49 (176)
16 2ktg_A Calmodulin, putative; e 45.0 56 0.0019 20.6 5.8 49 3-55 3-51 (85)
17 3dtp_E RLC, myosin regulatory 43.5 27 0.00093 26.1 4.2 63 5-82 48-110 (196)
18 1nya_A Calerythrin; EF-hand, m 43.1 8.7 0.0003 27.4 1.3 50 8-57 1-50 (176)
19 1w7j_B Myosin light chain 1; m 41.6 33 0.0011 23.7 4.1 46 6-55 2-47 (151)
20 2ovk_C Myosin catalytic light 41.5 79 0.0027 22.0 6.3 65 7-83 2-68 (159)
21 2joj_A Centrin protein; N-term 38.6 63 0.0022 19.8 4.8 44 8-55 1-44 (77)
22 2be4_A Hypothetical protein LO 37.9 19 0.00066 27.5 2.6 73 7-82 4-78 (272)
23 2mys_C Myosin; muscle protein, 37.1 55 0.0019 22.2 4.7 44 8-55 2-45 (149)
24 2xw6_A MGS, methylglyoxal synt 33.4 61 0.0021 24.8 4.8 83 10-103 12-106 (134)
25 1c07_A Protein (epidermal grow 31.5 72 0.0025 21.4 4.5 48 8-60 4-51 (95)
26 3fwb_A Cell division control p 30.9 1.1E+02 0.0039 20.9 5.6 47 5-55 14-60 (161)
27 3j04_B Myosin regulatory light 28.4 42 0.0014 22.9 2.8 44 8-55 1-44 (143)
28 2oxl_A Hypothetical protein YM 28.0 37 0.0013 23.1 2.4 50 10-63 4-53 (64)
29 2lv7_A Calcium-binding protein 26.7 55 0.0019 22.6 3.2 46 6-55 28-73 (100)
30 1fi6_A EH domain protein REPS1 25.8 79 0.0027 21.0 3.8 63 7-82 2-64 (92)
31 4ds7_A Calmodulin, CAM; protei 23.1 1.7E+02 0.0059 19.5 5.4 46 6-55 3-48 (147)
32 2jnf_A Troponin C; stretch act 22.6 1.6E+02 0.0055 20.2 5.1 48 4-55 3-51 (158)
33 1nsj_A PRAI, phosphoribosyl an 22.1 48 0.0017 26.6 2.5 29 146-180 154-182 (205)
34 3k21_A PFCDPK3, calcium-depend 21.7 1.2E+02 0.004 22.4 4.5 63 8-82 46-108 (191)
35 2xv9_A ABA-1A1 repeat UNIT; li 21.4 59 0.002 25.1 2.7 19 2-20 15-33 (134)
36 2yvq_A Carbamoyl-phosphate syn 21.0 79 0.0027 23.6 3.4 41 9-53 32-72 (143)
37 1exr_A Calmodulin; high resolu 20.9 1.8E+02 0.0063 19.9 5.2 45 7-55 3-47 (148)
38 1top_A Troponin C; contractIle 20.7 2E+02 0.0067 19.7 5.3 65 7-83 13-78 (162)
No 1
>3kx6_A Fructose-bisphosphate aldolase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, glycolysis, lyase, STRU genomics; HET: CIT; 2.10A {Babesia bovis}
Probab=100.00 E-value=2.3e-85 Score=587.99 Aligned_cols=176 Identities=53% Similarity=0.853 Sum_probs=171.9
Q ss_pred CCCChHHHHHHHHHHHHHhcCCCceEeecCCCCchHHHhhhcCCCCchhhHHhhhhhhcccCCCCCCceeeeecchhhhc
Q psy12531 6 NYPPPALQEELKKIAEAIVAPGKGILAADESVSTMGKRLQDIGCENTEEHRRLYRQLLFTSDKVIGDNISGVILFHETLY 85 (183)
Q Consensus 6 ~~~~~~~~~eL~~ta~~i~a~GKGiLAaDES~gt~~KRl~~iGventeenRr~yRelL~tt~~~~~~~IsGvILfeETl~ 85 (183)
.+++.++++||++||++|++|||||||||||+|||+|||++|||||||||||+||++|||+ |++++|||||||||||||
T Consensus 24 ~~~~~~~~~eL~~~A~~ivapGKGiLAADES~gT~~Krl~~iGventeenrr~yR~lLfts-p~~~~~IsGvILFeETl~ 102 (379)
T 3kx6_A 24 VKLSQERAKELAENASFIASPGKGILAADESTGTIQKRFDNVGVENTEKNRAEYRSILFTT-KGLGKYISGCILFEETLF 102 (379)
T ss_dssp SSCCHHHHHHHHHHHHHHTCTTCEEEEECCCHHHHHHHHHTTTCCCCHHHHHHHHHHHHTC-TTGGGTEEEEEECHHHHT
T ss_pred hhcChHHHHHHHHHHHHHhCCCCceEEecCCCCcHHHHHHHcCCCCcHHHHHHHHHHhhcC-cccccceeEEEcchhhcc
Confidence 5789999999999999999999999999999999999999999999999999999999999 679999999999999999
Q ss_pred ccccCCCchHHHhhhCCceeeEecCCccccCCCCCCccccch--------------------------------------
Q psy12531 86 QKADDGTPFVELLKQRGIIPGIKVDKGVVPLMGSEDECTTQA-------------------------------------- 127 (183)
Q Consensus 86 Q~~~dG~~~~~~L~~~GIvpGIKVDkG~~pL~g~~~E~~TqG-------------------------------------- 127 (183)
|+++||+||+|+|+++|||||||||||++||+|++||++|||
T Consensus 103 Qk~~dG~pf~~~L~~kGIvPGIKVDkG~~pl~g~~ge~~tqGLDgL~eRca~y~~~Ga~FAKWR~Vlki~~~~g~PS~~a 182 (379)
T 3kx6_A 103 QQAPNGQNMVDLLRAEGILPGIKVDKGLVTIPNTDEEVSTTGLDGLAERCQKYYNAGARFAKWRAVLSIDVKKNKPSNLS 182 (379)
T ss_dssp CBCTTSCBHHHHHHHHTCEEEEECCCCEEECTTSSSCEEECCCTTHHHHHHHHHHTTCCEEEEEEEECCBTTTTBSCHHH
T ss_pred ccccCCCCHHHHHHHCCCccEEEcCCCccccCCCCCCccCCChHHHHHHHHHHhhcCCCceeeeeeEeecCCCCCCcHHH
Confidence 999999999999999999999999999999999999999999
Q ss_pred --------------------------------------------------------------------------------
Q psy12531 128 -------------------------------------------------------------------------------- 127 (183)
Q Consensus 128 -------------------------------------------------------------------------------- 127 (183)
T Consensus 183 I~ena~~LArYA~icQ~~GLVPIVEPEVl~dGdHdi~~c~~Vte~VLa~vykaL~dh~V~LEG~lLKPnMV~pG~~~~~k 262 (379)
T 3kx6_A 183 ILETAHTLARYAAICQENGLVPIVEPEILADGDHSIEVCAEVTERVLAAVFKALNDHKVLLEGALLKPNMVTQGVDCKDK 262 (379)
T ss_dssp HHHHHHHHHHHHHHHHHTTCEEEEEEEECCCSSCCHHHHHHHHHHHHHHHHHHHHHTTCCGGGCEECCCCCCCCTTCSCC
T ss_pred HHHHHHHHHHHHHHHHHcCcceeeeeeeCCCCCcCHHHHHHHHHHHHHHHHHHHHhCCccccCcccccCcccCCCcCCCc
Confidence
Q ss_pred -------hhHHHhhhccCCCCCCceeeccCCCCHHHHHHHhHHHhccCCCCCceeeeeccCCC
Q psy12531 128 -------QATVQALQRTVPAAVPGITFLSGGQSEEEASVNLDAINKYSGKKPWALTFSYGRAL 183 (183)
Q Consensus 128 -------~~Tv~~l~rtVP~avpGi~FLSGGqsee~At~~LnaiN~~~~~~PW~LsFSygRAL 183 (183)
++||++|+||||+|||||+||||||||||||+||||||++. ++||+|||||||||
T Consensus 263 ~s~eeVA~aTv~~L~rtVP~avpGI~FLSGGqSeeeAt~nLnAmN~~~-~~PW~LsFSyGRAL 324 (379)
T 3kx6_A 263 PAPQTVGFLTSRALRRTVPPALPGVMFLSGGQSESMATRHLNEINKCN-KHPWSLSFSYGRAL 324 (379)
T ss_dssp CCHHHHHHHHHHHHHTTCCTTSCEEEECCTTCCHHHHHHHHHHHHHTC-CCSSEEEEEESHHH
T ss_pred CCHHHHHHHHHHHHHhcCCcccCcceecCCCCCHHHHHHHHHHHhhcC-CCCcceeeechhhh
Confidence 78999999999999999999999999999999999999985 78999999999997
No 2
>3mbd_A Fructose-bisphosphate aldolase; glycolysis, lyase, schiff base; 2.00A {Encephalitozoon cuniculi} PDB: 3mbf_A* 3qrh_A
Probab=100.00 E-value=3.1e-85 Score=581.39 Aligned_cols=175 Identities=45% Similarity=0.697 Sum_probs=169.5
Q ss_pred CCCChHHHHHHHHHHHHHhcCCCceEeecCCCCchHHHhhhcCCCCchhhHHhhhhhhcccCCCCCCceeeeecchhhhc
Q psy12531 6 NYPPPALQEELKKIAEAIVAPGKGILAADESVSTMGKRLQDIGCENTEEHRRLYRQLLFTSDKVIGDNISGVILFHETLY 85 (183)
Q Consensus 6 ~~~~~~~~~eL~~ta~~i~a~GKGiLAaDES~gt~~KRl~~iGventeenRr~yRelL~tt~~~~~~~IsGvILfeETl~ 85 (183)
..+++|+++||++||++|++|||||||||||+|||+|||++|||||||||||+||++|||+ |++++|||||||||||||
T Consensus 4 ~~~~~~~~~eL~~~A~~iva~GKGiLAADES~gt~~Krl~~iGventeenrr~yR~lL~ts-p~~~~~IsGvILfeETl~ 82 (342)
T 3mbd_A 4 SMMDCDHLLRLGMTAKKILENGKGILAADETPKTLGRRFEKLGITNTEENRRKFREILFST-KGIERYIGGVILNQETFE 82 (342)
T ss_dssp --CCHHHHHHHHHHHHHHHGGGCEEEEECCCHHHHHHHHHHTTCCCCHHHHHHHHHHHHTC-TTGGGTEEEEEECGGGGG
T ss_pred ccCCHHHHHHHHHHHHHHhCCCCeEEEecCCCCchHHHHHHcCCCCcHHHHHHHHHHHhcC-cccccceeEEEcchhhcc
Confidence 4689999999999999999999999999999999999999999999999999999999999 679999999999999999
Q ss_pred ccccCCCchHHHhhhCCceeeEecCCccccCCCCCCccccch--------------------------------------
Q psy12531 86 QKADDGTPFVELLKQRGIIPGIKVDKGVVPLMGSEDECTTQA-------------------------------------- 127 (183)
Q Consensus 86 Q~~~dG~~~~~~L~~~GIvpGIKVDkG~~pL~g~~~E~~TqG-------------------------------------- 127 (183)
|+++||+||+++|+++|||||||||||++|| ++||++|||
T Consensus 83 qk~~dG~pf~~~L~~kGIvpGIKVDkG~~pl--~~ge~~tqGLDgL~eR~a~y~~~Ga~FAKWR~Vlki~~~~PS~~aI~ 160 (342)
T 3mbd_A 83 QTSGSGVPLTELLKKKGIEIGIKLDKGLIDY--KEKEKISVGLEDLDLRCKSSAFKDATFAKWRSLFYFYDGIPSEDCIN 160 (342)
T ss_dssp CBCTTSCBHHHHHHHTTCEEEEECCCCEEEE--TTTEEEECCGGGHHHHHTCGGGTTCCEEEEEEEECCBTTBSCHHHHH
T ss_pred ccccCCCCHHHHHHHCCCeeEEecCCCCcCC--CCCCccccchHHHHHHHHHHHhcCCceeeeeeEEecCCCCCCHHHHH
Confidence 9999999999999999999999999999999 899999999
Q ss_pred --------------------------------------------------------------------------------
Q psy12531 128 -------------------------------------------------------------------------------- 127 (183)
Q Consensus 128 -------------------------------------------------------------------------------- 127 (183)
T Consensus 161 ena~~LarYA~icQ~~GLVPIVEPEVl~dGdHdi~~c~~vte~vla~v~kaL~~h~V~lEG~lLKPnMV~pG~~~~~k~s 240 (342)
T 3mbd_A 161 ENCSILAKYAIICQKNGLVPIVEPEVFLEGDYSMKRSYEVTRQILSTLMKYLNYELVYIPGVLIKASYVTSGQLSNEKYT 240 (342)
T ss_dssp HHHHHHHHHHHHHHHTTCEEEEEEEECSSSCCCHHHHHHHHHHHHHHHHHHHHHTTCCGGGCEEEECCCCCCTTSCCCCC
T ss_pred HHHHHHHHHHHHHHHcCCceeeeeeECCCCCcCHHHHHHHHHHHHHHHHHHHHhCCccccCcccccccccCCCcCCCcCC
Confidence
Q ss_pred -----hhHHHhhhccCCCCCCceeeccCCCCHHHHHHHhHHHhccCCCCCceeeeeccCCC
Q psy12531 128 -----QATVQALQRTVPAAVPGITFLSGGQSEEEASVNLDAINKYSGKKPWALTFSYGRAL 183 (183)
Q Consensus 128 -----~~Tv~~l~rtVP~avpGi~FLSGGqsee~At~~LnaiN~~~~~~PW~LsFSygRAL 183 (183)
++||++|+||||+|||||+||||||||||||+||||||+++.++||+|||||||||
T Consensus 241 ~eeVA~~Tv~~L~rtVP~avpGI~FLSGGqSeeeAt~nLnAmN~~~~~~PW~LsFSygRAL 301 (342)
T 3mbd_A 241 PKKVATFTLRALLSTIPCGIPGIVFLSGGHGSEDAIGFLNAINMERGCRTWSLSFSFARAL 301 (342)
T ss_dssp HHHHHHHHHHHHHHHCCTTCCEEEECCTTSCHHHHHHHHHHHHHCCCCCSSEEEEEESHHH
T ss_pred HHHHHHHHHHHHHhcCCcccCcceecCCCCCHHHHHHHHHHHhcCCCCCCeeEEEecchhh
Confidence 78999999999999999999999999999999999999998778999999999997
No 3
>3bv4_A Fructose-bisphosphate aldolase A; lyase, acetylation, glycolysis, phosphoprotein, schiff base; HET: 13P; 1.70A {Oryctolagus cuniculus} PDB: 1ado_A* 1ewd_A 1zai_A* 1zah_A* 1zaj_A* 1zal_A 2ot0_A 2ot1_A* 2qut_A 2quv_A 3lge_A 3tu9_A* 3b8d_A 6ald_A* 1ex5_A 1ewe_A 2quu_A 3dfn_A 3dfo_A 3dfp_A ...
Probab=100.00 E-value=3.9e-84 Score=575.11 Aligned_cols=178 Identities=67% Similarity=0.993 Sum_probs=173.4
Q ss_pred CCCChHHHHHHHHHHHHHhcCCCceEeecCCCCchHHHhhhcCCCCchhhHHhhhhhhcccCCCCCCceeeeecchhhhc
Q psy12531 6 NYPPPALQEELKKIAEAIVAPGKGILAADESVSTMGKRLQDIGCENTEEHRRLYRQLLFTSDKVIGDNISGVILFHETLY 85 (183)
Q Consensus 6 ~~~~~~~~~eL~~ta~~i~a~GKGiLAaDES~gt~~KRl~~iGventeenRr~yRelL~tt~~~~~~~IsGvILfeETl~ 85 (183)
|.+++++++||++||++|++|||||||||||+|||+|||++|||||||||||+||++|||+|.++++|||||||||||||
T Consensus 2 ~~~~~~~~~eL~~~a~~i~a~GKGiLAADES~gT~~Krl~~iGvente~nrr~yR~ll~tsp~~~~~~IsGvILfeETl~ 81 (341)
T 3bv4_A 2 PALTPEQKKELSDIAHRIVAPGKGILAADESTGSIAKRLQSIGTENTEENRRFYRQLLLTADDRVNPCIGGVILFHETLY 81 (341)
T ss_dssp CCCCHHHHHHHHHHHHHHTCTTCEEEEECCCHHHHHHHHHTTTCCCCHHHHHHHHHHHHTCCGGGTTTEEEEEECHHHHT
T ss_pred CCCCHHHHHHHHHHHHHHhCCCCceEEecCCCCchhHHHHhcCCCCCchhHHHHHhhhhcCCcccccceEEEEcchhhcc
Confidence 56789999999999999999999999999999999999999999999999999999999997779999999999999999
Q ss_pred ccccCCCchHHHhhhCCceeeEecCCccccCCCCCCccccch--------------------------------------
Q psy12531 86 QKADDGTPFVELLKQRGIIPGIKVDKGVVPLMGSEDECTTQA-------------------------------------- 127 (183)
Q Consensus 86 Q~~~dG~~~~~~L~~~GIvpGIKVDkG~~pL~g~~~E~~TqG-------------------------------------- 127 (183)
|+++||+||+|+|+++|||||||||||++||+|+++|++|||
T Consensus 82 qk~~dG~p~~~~L~~~GIvPgIKVDkGl~pl~G~~~e~~t~GLDgL~eR~~~y~~~Ga~FAKWR~Viki~~~~PS~~aI~ 161 (341)
T 3bv4_A 82 QKADDGRPFPQVIKSKGGVVGIKVDKGVVPLAGTNGETTTQGLVGLSERCAQYKKDGADFAKWRCVLKIGEHTPSALAIM 161 (341)
T ss_dssp CBCTTSCBHHHHHHTTTCEEEEECCCCEEECTTSSSCEEECCCTTHHHHHHHHHHTTCCEEEEEEEECCBTTBSCHHHHH
T ss_pred ccCcCCcCHHHHHHHCCCceEEEcCCCcCcCCCCCCCcCCCChhHHHHHHHHHHhcCCcceeeeeEEecCCCCCCHHHHH
Confidence 999999999999999999999999999999999999999999
Q ss_pred --------------------------------------------------------------------------------
Q psy12531 128 -------------------------------------------------------------------------------- 127 (183)
Q Consensus 128 -------------------------------------------------------------------------------- 127 (183)
T Consensus 162 ~na~~LaryA~icQ~~GLVPIVEPEVl~dg~h~l~~~~~vte~vL~~~~~aL~d~~V~LegtLLKPnMV~pg~~~~~~~~ 241 (341)
T 3bv4_A 162 ENANVLARYASICQQNGIVPIVEPEILPDGDHDLKRCQYVTEKVLAAVYKALSDHHIYLEGTLLKPNMVTPGHACTQKYS 241 (341)
T ss_dssp HHHHHHHHHHHHHHHTTCEEEEEEEECCCSSCCHHHHHHHHHHHHHHHHHHHHHTTCCGGGCEECCCCCCCCTTCSSCCC
T ss_pred HHHHHHHHHHHHHHHcCcceeecceECCCCCCCHHHHHHHHHHHHHHHHHHhcCCeEEecCccCcCccccCCCcccccCC
Confidence
Q ss_pred -----hhHHHhhhccCCCCCCceeeccCCCCHHHHHHHhHHHhccCCCCCceeeeeccCCC
Q psy12531 128 -----QATVQALQRTVPAAVPGITFLSGGQSEEEASVNLDAINKYSGKKPWALTFSYGRAL 183 (183)
Q Consensus 128 -----~~Tv~~l~rtVP~avpGi~FLSGGqsee~At~~LnaiN~~~~~~PW~LsFSygRAL 183 (183)
++||++|+|||||+||||+|||||||+||||.||||||+++..+||.|||||||||
T Consensus 242 ~e~va~~Tv~~l~rtvP~aVpgI~fLSGGqS~eeAt~~LnA~N~~~~~~pw~lsfSygRAL 302 (341)
T 3bv4_A 242 HEEIAMATVTALRRTVPPAVTGVTFLSGGQSEEEASINLNAINKCPLLKPWALTFSYGRAL 302 (341)
T ss_dssp HHHHHHHHHHHHHTTSCTTSCEEEECCTTCCHHHHHHHHHHHHHCCSCCCSEEEEEESHHH
T ss_pred HHHHHHHHHHHHhhcCCcccCeeeecCCCCCHHHHHHHHHHhhccCCCCCeeEEEEehHHH
Confidence 68999999999999999999999999999999999999987677999999999997
No 4
>2pc4_A 41 kDa antigen, fructose-bisphosphate aldolase; invasion machinery, structu genomics, PSI, protein structure initiative; 2.40A {Plasmodium falciparum} PDB: 2eph_A 1a5c_A
Probab=100.00 E-value=4.7e-84 Score=578.99 Aligned_cols=181 Identities=56% Similarity=0.844 Sum_probs=175.8
Q ss_pred CCCCC--CCCChHHHHHHHHHHHHHhcCCCceEeecCCCCchHHHhhhcCCCCchhhHHhhhhhhcccCCCCCCceeeee
Q psy12531 1 MTTYF--NYPPPALQEELKKIAEAIVAPGKGILAADESVSTMGKRLQDIGCENTEEHRRLYRQLLFTSDKVIGDNISGVI 78 (183)
Q Consensus 1 ~~~~~--~~~~~~~~~eL~~ta~~i~a~GKGiLAaDES~gt~~KRl~~iGventeenRr~yRelL~tt~~~~~~~IsGvI 78 (183)
|++++ +.+++++++||++||++|++|||||||||||+|||+|||++|||||||||||+||++|||+ |++++||||||
T Consensus 5 ~~~~~~~~~~~~~~~~eL~~~a~~iva~GKGiLAADES~gT~~Krl~~iGventeenrr~yR~ll~ts-p~~~~~IsGvI 83 (369)
T 2pc4_A 5 TEYMNAPKKLPADVAEELATTAQKLVQAGKGILAADESTQTIKKRFDNIKLENTIENRASYRDLLFGT-KGLGKFISGAI 83 (369)
T ss_dssp CSCCSSCCCCCHHHHHHHHHHHHHHTCTTCEEEEECCCHHHHHHHHHHTTCCCCHHHHHHHHHHHHTC-TTCTTTEEEEE
T ss_pred cccccCCCCCCHHHHHHHHHHHHHHhCCCCceEEecCCCCchHHHHHHcCCCCchHHHHHHHHHhccC-CCcccceEEEE
Confidence 45667 8899999999999999999999999999999999999999999999999999999999999 56999999999
Q ss_pred cchhhhcccccCCCchHHHhhhCCceeeEecCCccccCCCCCCccccch-------------------------------
Q psy12531 79 LFHETLYQKADDGTPFVELLKQRGIIPGIKVDKGVVPLMGSEDECTTQA------------------------------- 127 (183)
Q Consensus 79 LfeETl~Q~~~dG~~~~~~L~~~GIvpGIKVDkG~~pL~g~~~E~~TqG------------------------------- 127 (183)
||||||||+++||+||+|+|+++|||||||||||++||+|+++|++|||
T Consensus 84 LfeETl~qk~~dG~pf~~~L~~kGIvPGIKVDkGl~pl~g~~~e~~tqGLDgL~eR~a~y~~~Ga~FAKWR~Viki~~~~ 163 (369)
T 2pc4_A 84 LFEETLFQKNEAGVPMVNLLHNENIIPGIKVDKGLVNIPCTDEEKSTQGLDGLAERCKEYYKAGARFAKWRTVLVIDTAK 163 (369)
T ss_dssp ECHHHHTCBCTTSCBHHHHHHHHTCEEEEECCCCEEECTTSSSCEEECCCTTHHHHHHHHHHHTCCEEEEEEEECCBGGG
T ss_pred cchHhccCcCcCCcCHHHHHHHCCCceEEEcCCCcccCCCCCCCcCCCChhhHHHHHHHHHhCCCCeeeeeEEEEecCCC
Confidence 9999999999999999999999999999999999999999999999999
Q ss_pred --------------------------------------------------------------------------------
Q psy12531 128 -------------------------------------------------------------------------------- 127 (183)
Q Consensus 128 -------------------------------------------------------------------------------- 127 (183)
T Consensus 164 ~~PS~~aI~~na~~LArYA~icQ~~GLVPIVEPEVl~dG~h~l~~~~~vte~vL~~~~~aL~d~~V~LegtLLKpnmv~~ 243 (369)
T 2pc4_A 164 GKPTDLSIHETAWGLARYASICQQNRLVPIVEPEILADGPHSIEVCAVVTQKVLSCVFKALQENGVLLEGALLKPNMVTA 243 (369)
T ss_dssp TBSCHHHHHHHHHHHHHHHHHHHHTTCEEEEEEEECCCSSCCHHHHHHHHHHHHHHHHHHHHHTTCCGGGCEECCCCCCC
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHHcCccceecceECCCCCCCHHHHHHHHHHHHHHHHHhcCCCeEEecCccCCCccccc
Confidence
Q ss_pred --------------hhHHHhhhccCCCCCCceeeccCCCCHHHHHHHhHHHhccCCCCCceeeeeccCCC
Q psy12531 128 --------------QATVQALQRTVPAAVPGITFLSGGQSEEEASVNLDAINKYSGKKPWALTFSYGRAL 183 (183)
Q Consensus 128 --------------~~Tv~~l~rtVP~avpGi~FLSGGqsee~At~~LnaiN~~~~~~PW~LsFSygRAL 183 (183)
++||++|+|||||+||||+|||||||+||||.||||||+++ ++||.|||||||||
T Consensus 244 G~~~~~k~s~e~vA~~Tv~~L~rtvPpaVpgI~fLSGGqSeeeAt~~LnamN~~~-~~PW~lsFSygRAL 312 (369)
T 2pc4_A 244 GYECTAKTTTQDVGFLTVRTLRRTVPPALPGVVFLSGGQSEEEASVNLNSINALG-PHPWALTFSYGRAL 312 (369)
T ss_dssp CTTCSSCCCHHHHHHHHHHHHHHHCCTTSCEEEECCTTCCHHHHHHHHHHHHHTC-CCSSEEEEEESHHH
T ss_pred cccccccCCHHHHHHHHHHHHHhcCCccCCeeeeCCCCCCHHHHHHHHHHhhcCC-CCCceeEEehHHhh
Confidence 78999999999999999999999999999999999999986 88999999999997
No 5
>2qap_A Fructose-1,6-bisphosphate aldolase; beta barrel, fructose-1,6-bisphosphate teminal tail, lyase; 1.59A {Leishmania mexicana} SCOP: c.1.10.1 PDB: 2qdg_A* 2qdh_A* 1epx_A 1f2j_A
Probab=100.00 E-value=5e-84 Score=581.80 Aligned_cols=182 Identities=48% Similarity=0.737 Sum_probs=177.1
Q ss_pred CCCCCCCCChHHHHHHHHHHHHHhcCCCceEeecCCCCchHHHhhhcCCCCchhhHHhhhhhhcccCCCCCCceeeeecc
Q psy12531 1 MTTYFNYPPPALQEELKKIAEAIVAPGKGILAADESVSTMGKRLQDIGCENTEEHRRLYRQLLFTSDKVIGDNISGVILF 80 (183)
Q Consensus 1 ~~~~~~~~~~~~~~eL~~ta~~i~a~GKGiLAaDES~gt~~KRl~~iGventeenRr~yRelL~tt~~~~~~~IsGvILf 80 (183)
|+++++.+++++++||++||++|++|||||||||||+|||+|||++|||||||||||+||++|||+ |++++||||||||
T Consensus 30 ~~~~~~~~~~~~~~eL~~~a~~iva~GKGiLAADES~gT~~Krl~~iGventeenrr~yR~lL~ts-p~~~~~IsGvILF 108 (391)
T 2qap_A 30 QLPAYNRLKTPYESELIATVKKLTTPGKGLLAADESIGSCTKRFQPIGLSNTEEHRRQYRALMLEA-EGFEQYISGVILH 108 (391)
T ss_dssp GSGGGCSCCCTTHHHHHHHHHHHTCTTCEEEEECCCTTTHHHHHGGGTCCCCHHHHHHHHHHHHTC-TTGGGTEEEEEEC
T ss_pred cccccccCCHHHHHHHHHHHHHHcCCCCceEEecCCCCchHHHHHhcCCCCCchhhHHHHHheecC-CCccCceEEEEcc
Confidence 467799999999999999999999999999999999999999999999999999999999999999 5699999999999
Q ss_pred hhhhcccccCCCchHHHhhhCCceeeEecCCccccCC-CCCCccccch--------------------------------
Q psy12531 81 HETLYQKADDGTPFVELLKQRGIIPGIKVDKGVVPLM-GSEDECTTQA-------------------------------- 127 (183)
Q Consensus 81 eETl~Q~~~dG~~~~~~L~~~GIvpGIKVDkG~~pL~-g~~~E~~TqG-------------------------------- 127 (183)
||||||+++||+||+|+|+++|||||||||||++||+ |+++|++|||
T Consensus 109 eETl~Qk~~dG~pf~~~L~~kGIvPGIKVDkGl~pl~~G~~~e~~tqGLDgL~eR~a~y~~~Ga~FAKWRsViki~~~~P 188 (391)
T 2qap_A 109 DETVGQKASNGQTFPEYLTARGVVPGIKTDMGLCPLLEGAEGEQMTEGLDGYVKRASAYYKKGCRFCKWRNVYKIQNGTV 188 (391)
T ss_dssp HHHHTCBCTTSSBHHHHHHHTTCEEEEECCCCEEECSSSSTTCEEECCCTTHHHHHHHHHHTTCCEEEEEEEECCBTTBC
T ss_pred hHhccCcCcCCcCHHHHHHHCCCeeEEEecCCcccccCCCCCCccCCChhHHHHHHHHHHhcCCcceeeeeEEeccCCCC
Confidence 9999999999999999999999999999999999999 9999999999
Q ss_pred --------------------------------------------------------------------------------
Q psy12531 128 -------------------------------------------------------------------------------- 127 (183)
Q Consensus 128 -------------------------------------------------------------------------------- 127 (183)
T Consensus 189 S~~aI~~na~~LArYA~icQ~~GLVPIVEPEVl~dG~H~l~~c~~Vte~vla~v~kaL~d~~V~LegtLLKPnMv~pG~~ 268 (391)
T 2qap_A 189 SESAVRFNAETLARYAILSQMSGLVPIVEPEVMIDGKHDIDTCQRVSEHVWREVVAALQRHGVIWEGCLLKPNMVVPGAE 268 (391)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTCEEEEEEEECCCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCGGGCEECCCCCCCCTT
T ss_pred CHHHHHHHHHHHHHHHHHHHHcCceeeecceECCCCCCCHHHHHHHHHHHHHHHHHHhcCCeEEecCccccCcccccCcc
Confidence
Q ss_pred -----------hhHHHhhhccCCCCCCceeeccCCCCHHHHHHHhHHHhccCCCCCceeeeeccCCC
Q psy12531 128 -----------QATVQALQRTVPAAVPGITFLSGGQSEEEASVNLDAINKYSGKKPWALTFSYGRAL 183 (183)
Q Consensus 128 -----------~~Tv~~l~rtVP~avpGi~FLSGGqsee~At~~LnaiN~~~~~~PW~LsFSygRAL 183 (183)
++||++|+|||||+||||+|||||||+||||+||||||+++..+||.|||||||||
T Consensus 269 ~~~k~s~eevA~~Tv~~L~rtVPpaVpgIvFLSGGqSeeeAt~~LnA~N~~~~~~PW~lsFSygRAL 335 (391)
T 2qap_A 269 SGKTAAPEQVAHYTVMTLARTMPAMLPGVMFLSGGLSEVQASEYLNAINNSPLPRPYFLSFSYARAL 335 (391)
T ss_dssp SSCCCCHHHHHHHHHHHHHHHSBTTCCEEEECCTTCCHHHHHHHHHHHTTCCSCCCSEEEEEESHHH
T ss_pred ccccCCHHHHHHHHHHHHhhcCCCccCeeeeCCCCCCHHHHHHHHhccccCCCCCCcceEEehHHHH
Confidence 68999999999999999999999999999999999999997778999999999997
No 6
>3mmt_A Fructose-bisphosphate aldolase; ssgcid, structural genomics, seattle structural GE center for infectious disease, hydrolase; HET: 2FP; 2.35A {Bartonella henselae} SCOP: c.1.10.0
Probab=100.00 E-value=6e-84 Score=574.02 Aligned_cols=172 Identities=55% Similarity=0.899 Sum_probs=167.8
Q ss_pred HHHHHHHHHHHHHhcCCCceEeecCCCCchHHHhhhcCCCCchhhHHhhhhhhcccCCCCCCceeeeecchhhhcccccC
Q psy12531 11 ALQEELKKIAEAIVAPGKGILAADESVSTMGKRLQDIGCENTEEHRRLYRQLLFTSDKVIGDNISGVILFHETLYQKADD 90 (183)
Q Consensus 11 ~~~~eL~~ta~~i~a~GKGiLAaDES~gt~~KRl~~iGventeenRr~yRelL~tt~~~~~~~IsGvILfeETl~Q~~~d 90 (183)
.|.+||++||++|++|||||||+|||+|||+|||++|||||||||||+||++|||++|++++||||||||||||||+++|
T Consensus 4 ~~~~eL~~~A~~iva~GKGiLAaDES~gT~~Krl~~iGventeenrr~yR~lL~ts~p~~~~~IsGvILfeETl~Qk~~d 83 (347)
T 3mmt_A 4 SMNERLEDIALTLVGAGKGILAADESTATIGKRFESIGVECTEDNRRAYREMLFTAKEAMESAISGVILFDETLRQKAST 83 (347)
T ss_dssp HHHHHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHTTCCCCHHHHHHHHHHHHTCHHHHHHTEEEEEECHHHHTCBCTT
T ss_pred hHHHHHHHHHHHHhCCCCceEEecCCCCcHHHHHHHcCCCCcHHHHHHHHHHHhcCCcccccceeEEEecHHhccccCcC
Confidence 46689999999999999999999999999999999999999999999999999999888999999999999999999999
Q ss_pred CCchHHHhhhCCceeeEecCCccccCCCCCCccccch-------------------------------------------
Q psy12531 91 GTPFVELLKQRGIIPGIKVDKGVVPLMGSEDECTTQA------------------------------------------- 127 (183)
Q Consensus 91 G~~~~~~L~~~GIvpGIKVDkG~~pL~g~~~E~~TqG------------------------------------------- 127 (183)
|+||+|+|+++|||||||||||++||+|+++|++|||
T Consensus 84 G~pf~~~L~~kGIvpGIKVDkG~~pl~G~~ge~~tqGLDgL~eR~a~y~~~Ga~FAKWR~Viki~~~~~PS~~aI~~na~ 163 (347)
T 3mmt_A 84 GQMLTDLIRDAGAVPGIKVDTGAKPLAAFPQETITEGLDGLRERLKDYYTLGARFAKWRAVIAIDAQTLPTRGAISQNAQ 163 (347)
T ss_dssp SSBHHHHHHHTTCEEEEECCCCEEECTTSTTCEEECCCTTHHHHHHHHHHTTCCEEEEEEEECCCSSSCSCHHHHHHHHH
T ss_pred CCCHHHHHHhCCCccEEEcCCCcccCCCCCCCccCCCchHHHHHHHHHHhcCCcceeeeeEEecCCCCCCCHHHHHHHHH
Confidence 9999999999999999999999999999999999999
Q ss_pred --------------------------------------------------------------------------------
Q psy12531 128 -------------------------------------------------------------------------------- 127 (183)
Q Consensus 128 -------------------------------------------------------------------------------- 127 (183)
T Consensus 164 ~LarYA~icQ~~GLVPIVEPEVl~dG~~~dHdi~~c~~Vte~VL~~v~kaL~dh~V~LEG~lLKPnMV~pG~~~~k~s~e 243 (347)
T 3mmt_A 164 ALARYAALCQEAGLVPIVEPEVLMDGPSRQHSITRCFEVTKVVLHTVFKELFEARVLFEGMILKPNMVIDGKDARIASVE 243 (347)
T ss_dssp HHHHHHHHHHHHTCEEEEEEEECSSSSCCCCCHHHHHHHHHHHHHHHHHHHHHTTCCGGGCEECCCCSCCCTTSCCCCHH
T ss_pred HHHHHHHHHHHcCccceeCceEcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCccccCcccccccccCCCCCCcCCHH
Confidence
Q ss_pred ---hhHHHhhhccCCCCCCceeeccCCCCHHHHHHHhHHHhccCCCCCceeeeeccCCC
Q psy12531 128 ---QATVQALQRTVPAAVPGITFLSGGQSEEEASVNLDAINKYSGKKPWALTFSYGRAL 183 (183)
Q Consensus 128 ---~~Tv~~l~rtVP~avpGi~FLSGGqsee~At~~LnaiN~~~~~~PW~LsFSygRAL 183 (183)
++||++|+||||+|||||+||||||||||||+||||||++ .++||+|||||||||
T Consensus 244 evA~~Tv~~L~rtVP~avpGI~FLSGGqSeeeAt~nLnAmN~~-~~~PW~LsFSygRAL 301 (347)
T 3mmt_A 244 EVAEKTVHVLKQTVPAAVPGIAFLSGGQTDEEATAHLSAMNAL-GALPWKLTFSYGRAL 301 (347)
T ss_dssp HHHHHHHHHHHHHSCTTSCEEEECCTTCCHHHHHHHHHHHTTS-CCCSSEEEEEESHHH
T ss_pred HHHHHHHHHHHhhCCcccCcceecCCCCCHHHHHHHHHHHhcC-CCCCeeeEeccchhh
Confidence 7899999999999999999999999999999999999998 678999999999997
No 7
>2iqt_A Fructose-bisphosphate aldolase class 1; TIM berrel, structural genomics, PSI-2; 2.46A {Porphyromonas gingivalis}
Probab=100.00 E-value=4.1e-66 Score=452.43 Aligned_cols=157 Identities=28% Similarity=0.336 Sum_probs=140.4
Q ss_pred HHHHHHhcCCCceEee-cCCCCchHHHhhhcCCCCchhh--------HHhhhhhhcccCCCCCCceeeeecchhhhcccc
Q psy12531 18 KIAEAIVAPGKGILAA-DESVSTMGKRLQDIGCENTEEH--------RRLYRQLLFTSDKVIGDNISGVILFHETLYQKA 88 (183)
Q Consensus 18 ~ta~~i~a~GKGiLAa-DES~gt~~KRl~~iGventeen--------Rr~yRelL~tt~~~~~~~IsGvILfeETl~Q~~ 88 (183)
....+.++|||||||| |||+|||+|||++||||||||| ||+||++|||+|.+.++||||||||||||||++
T Consensus 6 ~~~~~~va~GKGiLAAlDES~gt~~Krl~~iGvente~n~~~e~~~~rr~yR~ll~tsp~~~~~~IsGvILfeeTl~q~~ 85 (296)
T 2iqt_A 6 KEQLQQMRQAPGFVGALDQSGGSTPKALKAYGIQPDAYQSEEEMFDLIHQMRTRMITSPAFATGKIIGVILFERTMRGKI 85 (296)
T ss_dssp HHHHHHHHHCCSEEEEECCCGGGHHHHHHHTTCCGGGCCSHHHHHHHHHHHHHHHHHSGGGGSSSEEEEEECHHHHTSEE
T ss_pred HHHHHhcCCCCceEEeecCCCCchHHHHHHcCCCCccccchhhhHHHHHHHhhheecCCCcccCeeeeeeCchhhcCcCC
Confidence 4556789999999987 9999999999999999999988 689999999996556999999999999999985
Q ss_pred cCCCchHHHh-hhCCceeeEecCCccccCC-CCCCccccch---------------------------------------
Q psy12531 89 DDGTPFVELL-KQRGIIPGIKVDKGVVPLM-GSEDECTTQA--------------------------------------- 127 (183)
Q Consensus 89 ~dG~~~~~~L-~~~GIvpGIKVDkG~~pL~-g~~~E~~TqG--------------------------------------- 127 (183)
||+||+++| +++|||||||||||++||+ |.++|++|||
T Consensus 86 -dG~p~~~~Lw~~kGIvpgIKVDkGl~pl~~G~~~e~~tqGLDgL~eR~~~y~~~GAKWR~Vlki~~~~aI~~na~~lar 164 (296)
T 2iqt_A 86 -EGMPTADFLWEKRHIVPFLKVDKGLQDEANGVQLMKPFPELGKLCEEAVGYHVFGTKMRSVIKQANEQGIRDIVEQQFQ 164 (296)
T ss_dssp -TTEEHHHHHHHHHCCEEEEECCCCBCCCBTTEECBCCCTTHHHHHHHHHHTTCCEEEEEEEECSCCHHHHHHHHHHHHH
T ss_pred -CCeEhHHHHHHhCCCceEEEcCCCccccCCCCCCCccCCChhHHHHHHHHhccCCCeeeeeeecCchhHHHHHHHHHHH
Confidence 999999999 7999999999999999999 8899999999
Q ss_pred -----------------------------hhHHHhhhc-------------------------cCCCCCCceeeccCCCC
Q psy12531 128 -----------------------------QATVQALQR-------------------------TVPAAVPGITFLSGGQS 153 (183)
Q Consensus 128 -----------------------------~~Tv~~l~r-------------------------tVP~avpGi~FLSGGqs 153 (183)
..|-++|.. ..||+||||+|||||||
T Consensus 165 yA~icq~~GLVPIVEPEVl~dg~d~~~c~~vte~vL~~v~~aL~~~V~Legtlpg~~~~~~~va~ppaVpgVvfLSGGqS 244 (296)
T 2iqt_A 165 WGKEILSHGLVPILEPEVDIHCPEKAKAEEILKRELLAQLDKMTEPVMLKITIPTVDNFYKEIIEHPMMLRVVALSGGYS 244 (296)
T ss_dssp HHHHHHTTTCEEEEEEEECTTCTTHHHHHHHHHHHHHHHHHHCSSCEEEEEECCSSTTTTHHHHTSTTEEEEEEECTTCC
T ss_pred HHHHHHHcCccceecceECCCCCCHHHHHHHHHHHHHHHHHHHhhCcEEecccCCCCCCHHhhcCCCCCCeeeeCCCCCC
Confidence 222223222 12999999999999999
Q ss_pred HHHHHHHhHHHhccCCCCCceeeeeccCCC
Q psy12531 154 EEEASVNLDAINKYSGKKPWALTFSYGRAL 183 (183)
Q Consensus 154 ee~At~~LnaiN~~~~~~PW~LsFSygRAL 183 (183)
+||||.||||||+ |||||||||
T Consensus 245 eeeAt~~L~a~n~--------l~fSfgRAL 266 (296)
T 2iqt_A 245 REQANELLSRNHG--------VIASFSRAL 266 (296)
T ss_dssp HHHHHHHHTTSTT--------CEEEESHHH
T ss_pred HHHHHHHHHhcCC--------cEEEeHHHh
Confidence 9999999999985 599999997
No 8
>2lmt_A Calmodulin-related protein 97A; spermatogenesis, metal binding protein; NMR {Drosophila melanogaster} PDB: 2lmu_A 2lmv_A
Probab=67.09 E-value=14 Score=26.30 Aligned_cols=48 Identities=21% Similarity=0.266 Sum_probs=41.0
Q ss_pred CCCCChHHHHHHHHHHHHHhcCCCceEeecCCCCchHHHhhhcCCCCchhhH
Q psy12531 5 FNYPPPALQEELKKIAEAIVAPGKGILAADESVSTMGKRLQDIGCENTEEHR 56 (183)
Q Consensus 5 ~~~~~~~~~~eL~~ta~~i~a~GKGiLAaDES~gt~~KRl~~iGventeenR 56 (183)
+..||+++.++|++.=+.+=..|.|.|-.+| +...|+.+|...+++.-
T Consensus 1 Ms~lt~eqi~el~~~F~~~D~d~~G~I~~~E----l~~~l~~~~~~~~~~~~ 48 (148)
T 2lmt_A 1 MSELTEEQIAEFKDAFVQFDKEGTGKIATRE----LGTLMRTLGQNPTEAEL 48 (148)
T ss_dssp CCSCCSHHHHHHHHHHHHHHCSSCCEEEGGG----HHHHHHHHTCCCCHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHcCCCCCeECHHH----HHHHHHhcCCCchHHHH
Confidence 3568999999999999999999999998887 67888999988777543
No 9
>1j7q_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1j7r_A
Probab=63.13 E-value=17 Score=23.38 Aligned_cols=56 Identities=14% Similarity=0.090 Sum_probs=42.2
Q ss_pred CCCCCChHHHHHHHHHHHHHhcCCCceEeecCCCCchHHHhhhcCCCCchhhHHhhhhhh
Q psy12531 4 YFNYPPPALQEELKKIAEAIVAPGKGILAADESVSTMGKRLQDIGCENTEEHRRLYRQLL 63 (183)
Q Consensus 4 ~~~~~~~~~~~eL~~ta~~i~a~GKGiLAaDES~gt~~KRl~~iGventeenRr~yRelL 63 (183)
....+++++.++|...=+.+=..+.|.|-.+| +.+.|..+|...+++.....++++
T Consensus 4 ~~~~l~~~~~~~l~~~F~~~D~d~~G~I~~~e----l~~~l~~~g~~~~~~~~~~~~~~~ 59 (86)
T 1j7q_A 4 KARALGPEEKDECMKIFDIFDRNAENIAPVSD----TMDMLTKLGQTYTKRETEAIMKEA 59 (86)
T ss_dssp CCCCCSSTHHHHHHHHHHHHSTTTTSCBCHHH----HHHHHHHTSCCCSHHHHHHHHHHH
T ss_pred ccccCCHHHHHHHHHHHHHhCCCCCCcCcHHH----HHHHHHHHcCCCCHHHHHHHHHHH
Confidence 34567888999999999988889999996555 567788899887766543445554
No 10
>1wdc_C Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Z 1kqm_C* 1kwo_C* 1l2o_C* 1qvi_Z* 1s5g_Z* 1sr6_C 1b7t_Z 3jvt_C 3jtd_C 1kk8_C* 2ec6_C 1dfk_Z 1dfl_Z* 2w4t_Z 2w4v_Z 2w4w_Z 2otg_C* 2os8_C* 3pn7_C ...
Probab=57.31 E-value=26 Score=24.49 Aligned_cols=65 Identities=15% Similarity=0.040 Sum_probs=46.7
Q ss_pred CCCChHHHHHHHHHHHHHhc--CCCceEeecCCCCchHHHhhhcCCCCchhhHHhhhhhhcccCCCCCCceeeeecchh
Q psy12531 6 NYPPPALQEELKKIAEAIVA--PGKGILAADESVSTMGKRLQDIGCENTEEHRRLYRQLLFTSDKVIGDNISGVILFHE 82 (183)
Q Consensus 6 ~~~~~~~~~eL~~ta~~i~a--~GKGiLAaDES~gt~~KRl~~iGventeenRr~yRelL~tt~~~~~~~IsGvILfeE 82 (183)
+.|++++.++|...=+.+=. .+.|.|-.+| +.+.|..+|+..+++.-..+ ..+..+ -.|.|-|+|
T Consensus 1 ~~ls~~~~~~l~~~F~~~D~~~d~~G~i~~~e----l~~~l~~~g~~~~~~~~~~l--~~~D~~------~~g~i~~~e 67 (156)
T 1wdc_C 1 PKLSQDEIDDLKDVFELFDFWDGRDGAVDAFK----LGDVCRCLGINPRNEDVFAV--GGTHKM------GEKSLPFEE 67 (156)
T ss_dssp --CCHHHHHHHHHHHHHHHHHTCSSSCEEGGG----HHHHHHHTTCCCCHHHHHHT--TCCSST------TSCEECHHH
T ss_pred CCCCHHHHHHHHHHHHHHccCCCCCCCCcHHH----HHHHHHHcCCCCCHHHHHHH--HhhCCC------CCCeeeHHH
Confidence 45789999999999999988 9999997766 67788888988776554444 222221 246677777
No 11
>3i5g_B Myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_B 3i5h_B 3i5i_B
Probab=54.69 E-value=15 Score=27.10 Aligned_cols=48 Identities=13% Similarity=0.190 Sum_probs=41.7
Q ss_pred CCCChHHHHHHHHHHHHHhcCCCceEeecCCCCchHHHhhhcCCCCchhhHH
Q psy12531 6 NYPPPALQEELKKIAEAIVAPGKGILAADESVSTMGKRLQDIGCENTEEHRR 57 (183)
Q Consensus 6 ~~~~~~~~~eL~~ta~~i~a~GKGiLAaDES~gt~~KRl~~iGventeenRr 57 (183)
..||+++.++|++.=+.+=..|.|.|-.+| +...|+++|...+++.-.
T Consensus 8 ~~Lt~~qi~elk~~F~~~D~d~dG~I~~~E----l~~~l~~lg~~~~~~~~~ 55 (153)
T 3i5g_B 8 VKLSQRQMQELKEAFTMIDQDRDGFIGMED----LKDMFSSLGRVPPDDELN 55 (153)
T ss_dssp TTCCHHHHHHHHHHHHHHCCSTTSCCCHHH----HHHHHHHTTSCCCHHHHH
T ss_pred cCCCHHHHHHHHHHHHHHCCCCCCeEcHHH----HHHHHHHcCCCccHHHHH
Confidence 468999999999999999999999997777 788999999998886643
No 12
>3i5g_C Myosin catalytic light chain LC-1, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_C 3i5h_C 3i5i_C
Probab=53.27 E-value=28 Score=25.73 Aligned_cols=67 Identities=19% Similarity=0.216 Sum_probs=47.4
Q ss_pred CCCChHHHHHHHHHHHHHh--cCCCceEeecCCCCchHHHhhhcCCCCchhhHHhhhhhhcccCCCCCCceeeeecchhh
Q psy12531 6 NYPPPALQEELKKIAEAIV--APGKGILAADESVSTMGKRLQDIGCENTEEHRRLYRQLLFTSDKVIGDNISGVILFHET 83 (183)
Q Consensus 6 ~~~~~~~~~eL~~ta~~i~--a~GKGiLAaDES~gt~~KRl~~iGventeenRr~yRelL~tt~~~~~~~IsGvILfeET 83 (183)
+.||+++.++|++.=+.+= ..+.|.|-.+| +...|+++|+..|++.-+.+ +..+. .+ +|.|=|+|=
T Consensus 1 sqLt~eqi~elre~F~~fD~~~d~dG~I~~~E----l~~~lr~lG~~~t~~el~~~----~~~d~-~~---~g~i~f~eF 68 (159)
T 3i5g_C 1 SQLTKDEIEEVREVFDLFDFWDGRDGDVDAAK----VGDLLRCLGMNPTEAQVHQH----GGTKK-MG---EKAYKLEEI 68 (159)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHTTSSSCEEGGG----HHHHHHHTTCCCCHHHHHTT----TCCSS-TT---SCEECHHHH
T ss_pred CCCCHHHHHHHHHHHHHHCcCCCCCCeECHHH----HHHHHHHcCCCCCHHHHHHH----Hcccc-cC---CCcccHHHH
Confidence 3689999999988776653 37889997766 78889999999887654332 22222 11 577888885
Q ss_pred h
Q psy12531 84 L 84 (183)
Q Consensus 84 l 84 (183)
+
T Consensus 69 l 69 (159)
T 3i5g_C 69 L 69 (159)
T ss_dssp H
T ss_pred H
Confidence 4
No 13
>3khi_A Putative metal-dependent hydrolase; structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; 1.95A {Klebsiella pneumoniae subsp} PDB: 3dl1_A
Probab=50.06 E-value=13 Score=31.96 Aligned_cols=69 Identities=17% Similarity=0.227 Sum_probs=51.0
Q ss_pred CCCCCCChHHHHHHHHHHHHHhcCCCceEeecCCCCchHHHhhhc-CCCCchhhHH---h-hhhhhcccCCCCCCceeee
Q psy12531 3 TYFNYPPPALQEELKKIAEAIVAPGKGILAADESVSTMGKRLQDI-GCENTEEHRR---L-YRQLLFTSDKVIGDNISGV 77 (183)
Q Consensus 3 ~~~~~~~~~~~~eL~~ta~~i~a~GKGiLAaDES~gt~~KRl~~i-GventeenRr---~-yRelL~tt~~~~~~~IsGv 77 (183)
.+|..|+++.+..|+..+...++ .|+|... |+|=|+++|- + -=-++|.-+...-+....|
T Consensus 28 p~y~~L~~~e~~~L~~~~~~FL~---------------~K~f~g~~glevtdem~v~IAaqAcLpvL~l~~~~y~~~~~I 92 (267)
T 3khi_A 28 PVLAHLSSTEQHKLTQMAARFLQ---------------QKRLVALQGLELTPLHQARIAMLFCLPVLELGIEWLDGFHEV 92 (267)
T ss_dssp GGGTTCCHHHHHHHHHHHHHHHH---------------HCEEEECTTCCCCHHHHHHHHHHHHGGGTTTCGGGGTTCSEE
T ss_pred HHHhcCCHHHHHHHHHHHHHHHc---------------cCEEeccCCCccCHHHHHHHHHHHHHHHcCCCchHhCCCcEE
Confidence 46788999999999999998875 6888888 8999999983 1 1123444333445677899
Q ss_pred ecchhhhcc
Q psy12531 78 ILFHETLYQ 86 (183)
Q Consensus 78 ILfeETl~Q 86 (183)
|+|..+++-
T Consensus 93 lvYP~~f~~ 101 (267)
T 3khi_A 93 LIYPAPFIV 101 (267)
T ss_dssp EEESSCC--
T ss_pred EEeCccccc
Confidence 999999974
No 14
>2ovk_B RLC, myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, contractIle protein; 2.60A {Todarodes pacificus} PDB: 2ekv_B 2ekw_B 2oy6_B* 3i5f_B* 3i5g_B 3i5h_B 3i5i_B
Probab=49.28 E-value=23 Score=24.78 Aligned_cols=49 Identities=12% Similarity=0.150 Sum_probs=39.8
Q ss_pred CCCCCChHHHHHHHHHHHHHhcCCCceEeecCCCCchHHHhhhcCCCCchhhH
Q psy12531 4 YFNYPPPALQEELKKIAEAIVAPGKGILAADESVSTMGKRLQDIGCENTEEHR 56 (183)
Q Consensus 4 ~~~~~~~~~~~eL~~ta~~i~a~GKGiLAaDES~gt~~KRl~~iGventeenR 56 (183)
..+.+++++.++|...=+.+=.++.|.|-.+| +.+.|..+|..-+++.-
T Consensus 6 ~~~~l~~~~~~~l~~~F~~~D~d~~G~i~~~e----l~~~l~~~g~~~~~~~~ 54 (153)
T 2ovk_B 6 RRVKLSQRQMQELKEAFTMIDQDRDGFIGMED----LKDMFSSLGRVPPDDEL 54 (153)
T ss_dssp -CTTCCHHHHHHHHHHHHHHCCSTTTCCCHHH----HHHHTTTTTSCCCHHHH
T ss_pred ccCCCCHHHHHHHHHHHHHhCCCCCCeECHHH----HHHHHHHhCCCCCHHHH
Confidence 45778999999999999999899999997766 67788888887666543
No 15
>2lhi_A Calmodulin, serine/threonine-protein phosphatase catalytic subunit A1; yeast calmodulin, CNA1, metal binding protein; NMR {Saccharomyces cerevisiae}
Probab=49.14 E-value=10 Score=28.54 Aligned_cols=47 Identities=13% Similarity=0.200 Sum_probs=40.6
Q ss_pred CCCChHHHHHHHHHHHHHhcCCCceEeecCCCCchHHHhhhcCCCCchhhH
Q psy12531 6 NYPPPALQEELKKIAEAIVAPGKGILAADESVSTMGKRLQDIGCENTEEHR 56 (183)
Q Consensus 6 ~~~~~~~~~eL~~ta~~i~a~GKGiLAaDES~gt~~KRl~~iGventeenR 56 (183)
..||+++.++|++.=+.+=..|.|.|-.+| +.+.|..+|..-+++.-
T Consensus 3 ~~Lt~eqi~elk~~F~~~D~d~dG~I~~~E----l~~~l~~lg~~~~~~~~ 49 (176)
T 2lhi_A 3 SNLTEEQIAEFKEAFALFDKDNNGSISSSE----LATVMRSLGLSPSEAEV 49 (176)
T ss_dssp CCCCTTGGGHHHHHHHTTCSSCSSCBCHHH----HHHHHHHHTCCCCHHHH
T ss_pred CcCCHHHHHHHHHHHHHHCCCCCCCCCHHH----HHHHHHHcCCChhHHHH
Confidence 568999999999999988899999998877 68889999998877654
No 16
>2ktg_A Calmodulin, putative; ehcam, Ca-binding protein, partially structured protein, CAM-like; NMR {Entamoeba histolytica} PDB: 2lc5_A
Probab=45.02 E-value=56 Score=20.56 Aligned_cols=49 Identities=18% Similarity=0.251 Sum_probs=39.0
Q ss_pred CCCCCCChHHHHHHHHHHHHHhcCCCceEeecCCCCchHHHhhhcCCCCchhh
Q psy12531 3 TYFNYPPPALQEELKKIAEAIVAPGKGILAADESVSTMGKRLQDIGCENTEEH 55 (183)
Q Consensus 3 ~~~~~~~~~~~~eL~~ta~~i~a~GKGiLAaDES~gt~~KRl~~iGventeen 55 (183)
.....+++++.++|...=+.+=..+.|.|-.+| +.+.|..+|..-+++.
T Consensus 3 ~~~~~l~~~~~~~l~~~F~~~D~d~~G~i~~~e----l~~~l~~~g~~~~~~~ 51 (85)
T 2ktg_A 3 EQKKVLTAEEQQEYKEAFQLFDKDNDNKLTAEE----LGTVMRALGANPTKQK 51 (85)
T ss_dssp CCCCSSSHHHHHHHHHHHHHTCTTCCSEEEHHH----HHHHHHTTSSCCCHHH
T ss_pred hhhhhCCHHHHHHHHHHHHHHCCCCCCcCcHHH----HHHHHHHhCCCCCHHH
Confidence 345678999999999999999899999997766 5677888888755543
No 17
>3dtp_E RLC, myosin regulatory light chain; muscle protein, smooth muscle, myosin subfragment 2, heavy meromyosin, essential light chain; 20.00A {Avicularia avicularia}
Probab=43.49 E-value=27 Score=26.10 Aligned_cols=63 Identities=17% Similarity=0.275 Sum_probs=46.8
Q ss_pred CCCCChHHHHHHHHHHHHHhcCCCceEeecCCCCchHHHhhhcCCCCchhhHHhhhhhhcccCCCCCCceeeeecchh
Q psy12531 5 FNYPPPALQEELKKIAEAIVAPGKGILAADESVSTMGKRLQDIGCENTEEHRRLYRQLLFTSDKVIGDNISGVILFHE 82 (183)
Q Consensus 5 ~~~~~~~~~~eL~~ta~~i~a~GKGiLAaDES~gt~~KRl~~iGventeenRr~yRelL~tt~~~~~~~IsGvILfeE 82 (183)
+..+++++..+|..+=+.+=.++.|.|-.+| +...|..+|+.-+++.- ++++ .. +.|.|=|+|
T Consensus 48 ~~~ls~~~~~~l~~~F~~~D~d~~G~i~~~e----l~~~l~~lg~~~~~~~~---~~l~-~~-------~~g~i~~~e 110 (196)
T 3dtp_E 48 FAMFTQHQVQEFKEAFQLIDQDKDGFISKND----IRATFDSLGRLCTEQEL---DSMV-AE-------APGPINFTM 110 (196)
T ss_dssp SCSSCTTTHHHHHHHHHHHCCSCSSBCCHHH----HHHHHHTTSCCCCHHHH---HHHH-TT-------SSSCCBHHH
T ss_pred hhhCCHHHHHHHHHHHHHHCCCCCCcCCHHH----HHHHHHHhCCCCCHHHH---HHHH-HH-------ccCCCcHHH
Confidence 5678999999999999999999999997766 67788888988665442 2222 11 056677777
No 18
>1nya_A Calerythrin; EF-hand, metal binding protein; NMR {Saccharopolyspora erythraea} SCOP: a.39.1.5
Probab=43.11 E-value=8.7 Score=27.37 Aligned_cols=50 Identities=14% Similarity=0.128 Sum_probs=38.9
Q ss_pred CChHHHHHHHHHHHHHhcCCCceEeecCCCCchHHHhhhcCCCCchhhHH
Q psy12531 8 PPPALQEELKKIAEAIVAPGKGILAADESVSTMGKRLQDIGCENTEEHRR 57 (183)
Q Consensus 8 ~~~~~~~eL~~ta~~i~a~GKGiLAaDES~gt~~KRl~~iGventeenRr 57 (183)
+|+++.++|...=+.+=.++.|.|-.+|-..-+.+.+..+|+..+++.-+
T Consensus 1 ls~~~~~~l~~~F~~~D~d~~G~i~~~el~~~~~~~l~~~g~~~~~~~~~ 50 (176)
T 1nya_A 1 TTAIASDRLKKRFDRWDFDGNGALERADFEKEAQHIAEAFGKDAGAAEVQ 50 (176)
T ss_dssp CCSHHHHHHHHHHHHCCSSCCSSBCSHHHHHHHHHHHHHTSSCSSSHHHH
T ss_pred CcHHHHHHHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHcCCCCCcHHHH
Confidence 57788999999999998999999987775554444688889887665443
No 19
>1w7j_B Myosin light chain 1; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Homo sapiens} SCOP: a.39.1.5 PDB: 1w7i_B* 1oe9_B* 3j04_C 1br1_B* 1br4_B* 1i84_T* 3dtp_C 2w4a_C 2w4g_C 2w4h_C
Probab=41.64 E-value=33 Score=23.73 Aligned_cols=46 Identities=20% Similarity=0.194 Sum_probs=31.5
Q ss_pred CCCChHHHHHHHHHHHHHhcCCCceEeecCCCCchHHHhhhcCCCCchhh
Q psy12531 6 NYPPPALQEELKKIAEAIVAPGKGILAADESVSTMGKRLQDIGCENTEEH 55 (183)
Q Consensus 6 ~~~~~~~~~eL~~ta~~i~a~GKGiLAaDES~gt~~KRl~~iGventeen 55 (183)
+.+|+++.++|...=+.+=..+.|.|-.+| +.+.|..+|...+++.
T Consensus 2 ~~ls~~~~~~l~~~F~~~D~d~~G~i~~~e----l~~~l~~~g~~~~~~~ 47 (151)
T 1w7j_B 2 IEFNKDQLEEFKEAFELFDRVGDGKILYSQ----CGDVMRALGQNPTNAE 47 (151)
T ss_dssp ---------CHHHHHHHHCCSSSSEEESTT----HHHHHHHTTCCCCHHH
T ss_pred CCCCHHHHHHHHHHHHHHCCCCCCcCcHHH----HHHHHHHcCCCCCHHH
Confidence 457888889999999999999999998777 7788888998876543
No 20
>2ovk_C Myosin catalytic light chain LC-1, mantle muscle, myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, contractIle protein; 2.60A {Todarodes pacificus} PDB: 2ekv_C 2ekw_C 2oy6_C* 3i5f_C* 3i5g_C 3i5h_C 3i5i_C
Probab=41.47 E-value=79 Score=22.03 Aligned_cols=65 Identities=20% Similarity=0.174 Sum_probs=47.3
Q ss_pred CCChHHHHHHHHHHHHHh--cCCCceEeecCCCCchHHHhhhcCCCCchhhHHhhhhhhcccCCCCCCceeeeecchhh
Q psy12531 7 YPPPALQEELKKIAEAIV--APGKGILAADESVSTMGKRLQDIGCENTEEHRRLYRQLLFTSDKVIGDNISGVILFHET 83 (183)
Q Consensus 7 ~~~~~~~~eL~~ta~~i~--a~GKGiLAaDES~gt~~KRl~~iGventeenRr~yRelL~tt~~~~~~~IsGvILfeET 83 (183)
.|++++.++|+..=+.+= ..+.|.|-.+| +.+.|..+|...+++.- .+++-..+. + .|.|=|+|=
T Consensus 2 ~ls~~~~~~l~~~F~~~D~~~d~~G~i~~~e----l~~~l~~lg~~~~~~~~---~~l~~~~d~--~---~g~i~~~eF 68 (159)
T 2ovk_C 2 QLTKDEIEEVREVFDLFDFWDGRDGDVDAAK----VGDLLRCLGMNPTEAQV---HQHGGTKKM--G---EKAYKLEEI 68 (159)
T ss_dssp CCCHHHHHHHHHHHHHHHHHTTSSSEEEGGG----HHHHHHHTTCCCCHHHH---HHTTCCSST--T---SCEEEHHHH
T ss_pred CCCHHHHHHHHHHHHHhCCCCCCCCCCcHHH----HHHHHHHcCCCCCHHHH---HHHHHHhcC--C---CCeEcHHHH
Confidence 578999999999999987 99999997776 67888899988666443 222222222 2 377888884
No 21
>2joj_A Centrin protein; N-terminal domain, centrin solution structure, EF-hand calcium binding protein, cell cycle; NMR {Euplotes octocarinatus}
Probab=38.63 E-value=63 Score=19.80 Aligned_cols=44 Identities=11% Similarity=0.214 Sum_probs=35.6
Q ss_pred CChHHHHHHHHHHHHHhcCCCceEeecCCCCchHHHhhhcCCCCchhh
Q psy12531 8 PPPALQEELKKIAEAIVAPGKGILAADESVSTMGKRLQDIGCENTEEH 55 (183)
Q Consensus 8 ~~~~~~~eL~~ta~~i~a~GKGiLAaDES~gt~~KRl~~iGventeen 55 (183)
+++++.++|...=+.+=..+.|.|-.+| +.+.|..+|..-+++.
T Consensus 1 ls~~~~~~l~~~F~~~D~d~~G~i~~~e----l~~~l~~~g~~~~~~~ 44 (77)
T 2joj_A 1 LSEEQKQEIKEAFDLFDTNKTGSIDYHE----LKVAMRALGFDVKKPE 44 (77)
T ss_dssp CCHHHHHHHHHHHHHHCCSSSSEEEHHH----HHHHHHHHTCCCHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCCCCCCcHHH----HHHHHHHhCCCCCHHH
Confidence 5778889999999999899999997776 5677888888766544
No 22
>2be4_A Hypothetical protein LOC449832; DR.36843, BC083168, calicium binding, EF-hand superfamily, S genomics, protein structure initiative, PSI; 2.10A {Danio rerio} PDB: 2q4u_A
Probab=37.94 E-value=19 Score=27.53 Aligned_cols=73 Identities=12% Similarity=0.124 Sum_probs=47.6
Q ss_pred CCChHHHHHHHHHHHHHhcCCCceEeecCCCCchHHHhhhcCC--CCchhhHHhhhhhhcccCCCCCCceeeeecchh
Q psy12531 7 YPPPALQEELKKIAEAIVAPGKGILAADESVSTMGKRLQDIGC--ENTEEHRRLYRQLLFTSDKVIGDNISGVILFHE 82 (183)
Q Consensus 7 ~~~~~~~~eL~~ta~~i~a~GKGiLAaDES~gt~~KRl~~iGv--enteenRr~yRelL~tt~~~~~~~IsGvILfeE 82 (183)
.++....++|+.+=+.+=..|.|.|-.+|-..-+.+.+.++|. .-+++.-..+.+.+|.. +...-.|.|-|+|
T Consensus 4 ~~~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~lg~~~~~~~~~~~~~~~~~f~~---~D~d~~g~i~~~E 78 (272)
T 2be4_A 4 AFANLDAAGFLQIWQHFDADDNGYIEGKELDDFFRHMLKKLQPKDKITDERVQQIKKSFMSA---YDATFDGRLQIEE 78 (272)
T ss_dssp CCCCCCHHHHHHHHHHHCTTCCSEEEGGGHHHHHHHHHHHHSTTSCCCHHHHHHHHHHHSCH---HHHTCCSEEEHHH
T ss_pred HHHhcCHHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHH---hcCCCCCcEeHHH
Confidence 4555566789999899999999999888865555554558898 66665555444444432 1111246666766
No 23
>2mys_C Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1m8q_C* 1mvw_C* 1o18_F* 1o19_C* 1o1a_C* 1o1b_C* 1o1c_C* 1o1d_C* 1o1e_C* 1o1f_C* 1o1g_C*
Probab=37.07 E-value=55 Score=22.21 Aligned_cols=44 Identities=16% Similarity=0.228 Sum_probs=35.6
Q ss_pred CChHHHHHHHHHHHHHhcCCCceEeecCCCCchHHHhhhcCCCCchhh
Q psy12531 8 PPPALQEELKKIAEAIVAPGKGILAADESVSTMGKRLQDIGCENTEEH 55 (183)
Q Consensus 8 ~~~~~~~eL~~ta~~i~a~GKGiLAaDES~gt~~KRl~~iGventeen 55 (183)
+|+++.++|...=+.+-..+.|.|-.+| +.+.|..+|...+++.
T Consensus 2 l~~~~~~~l~~~F~~~D~~~~G~i~~~e----l~~~l~~~~~~~~~~~ 45 (149)
T 2mys_C 2 FSKAAADDFKEAFLLFDRTGDAKITASQ----VGDIARALGQNPTNAE 45 (149)
T ss_pred CCHHHHHHHHHHHHHhCCCCCCcCcHHH----HHHHHHHhCCCCCHHH
Confidence 6888899999999999899999996655 5677888888766544
No 24
>2xw6_A MGS, methylglyoxal synthase; lyase; 1.08A {Thermus SP} PDB: 2x8w_A 1wo8_A
Probab=33.35 E-value=61 Score=24.81 Aligned_cols=83 Identities=19% Similarity=0.272 Sum_probs=59.6
Q ss_pred hHHHHHHHHHHHHHhcC--CCceEeecCCCCchHHHhhh-cCCCCch------hhHHhhhhhhcccCCCCCCceeeeecc
Q psy12531 10 PALQEELKKIAEAIVAP--GKGILAADESVSTMGKRLQD-IGCENTE------EHRRLYRQLLFTSDKVIGDNISGVILF 80 (183)
Q Consensus 10 ~~~~~eL~~ta~~i~a~--GKGiLAaDES~gt~~KRl~~-iGvente------enRr~yRelL~tt~~~~~~~IsGvILf 80 (183)
...|+++...|+++..- |-.|+| ++++++.|+. -|++-+. +.|..--+++ .+..|.-||-|
T Consensus 12 D~dK~~~v~~a~~~~~ll~Gf~l~A----T~gTa~~L~e~~Gl~v~~v~k~~~eG~p~I~d~I------~~geIdlVInt 81 (134)
T 2xw6_A 12 DAKKEEMVAFCQRHREVLARFPLVA----TGTTGRRIEEATGLTVEKLLSGPLGGDQQMGARV------AEGRILAVIFF 81 (134)
T ss_dssp GGGHHHHHHHHHHTHHHHTTSCEEE----CHHHHHHHHHHHCCCCEECSCGGGTHHHHHHHHH------HTTCEEEEEEE
T ss_pred cccHHHHHHHHHHHHHHhCCCEEEE----ccHHHHHHHHhhCceEEEEEecCCCCcchHHHHH------HCCCccEEEEc
Confidence 45788999999999998 999995 7899999998 8988432 3343344444 24458888888
Q ss_pred hh--hhccc-ccCCCchHHHhhhCCc
Q psy12531 81 HE--TLYQK-ADDGTPFVELLKQRGI 103 (183)
Q Consensus 81 eE--Tl~Q~-~~dG~~~~~~L~~~GI 103 (183)
.+ + .|. ..||..+-...-..+|
T Consensus 82 ~~pl~-~~~h~~D~~~IrR~A~~~~I 106 (134)
T 2xw6_A 82 RDPLT-AQPHEPDVQALLRVCDVHGV 106 (134)
T ss_dssp CCTTT-CCTTSCCSHHHHHHHHHHTC
T ss_pred cCccc-CCCccchHHHHHHHHHHcCC
Confidence 88 5 555 5677666665555554
No 25
>1c07_A Protein (epidermal growth factor receptor pathway substrate 15); calcium binding, signaling domain, NPF binding, FW binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6
Probab=31.46 E-value=72 Score=21.43 Aligned_cols=48 Identities=13% Similarity=0.137 Sum_probs=35.8
Q ss_pred CChHHHHHHHHHHHHHhcCCCceEeecCCCCchHHHhhhcCCCCchhhHHhhh
Q psy12531 8 PPPALQEELKKIAEAIVAPGKGILAADESVSTMGKRLQDIGCENTEEHRRLYR 60 (183)
Q Consensus 8 ~~~~~~~eL~~ta~~i~a~GKGiLAaDES~gt~~KRl~~iGventeenRr~yR 60 (183)
+++++.+++++.=+.+=.++.|.|-.|| +..-|...|+. .++-+.-++
T Consensus 4 ls~~~~~~~~~~F~~~D~d~dG~I~~~e----l~~~l~~~g~~-~~~~~~i~~ 51 (95)
T 1c07_A 4 VSPAEKAKYDEIFLKTDKDMDGFVSGLE----VREIFLKTGLP-STLLAHIWS 51 (95)
T ss_dssp SCSHHHHHHHHHHHHHCTTCSSEECHHH----HHHHHHTTTCC-HHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCCCCcEeHHH----HHHHHHHcCCC-HHHHHHHHH
Confidence 5788999999999988899999997777 56667777865 334433343
No 26
>3fwb_A Cell division control protein 31; gene gating, complex, cell cycle, cell division, mitosis, MR transport, nuclear pore complex, nucleus, phosphoprotein; 2.50A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2gv5_A 2doq_A 3fwc_A
Probab=30.85 E-value=1.1e+02 Score=20.94 Aligned_cols=47 Identities=13% Similarity=0.131 Sum_probs=39.5
Q ss_pred CCCCChHHHHHHHHHHHHHhcCCCceEeecCCCCchHHHhhhcCCCCchhh
Q psy12531 5 FNYPPPALQEELKKIAEAIVAPGKGILAADESVSTMGKRLQDIGCENTEEH 55 (183)
Q Consensus 5 ~~~~~~~~~~eL~~ta~~i~a~GKGiLAaDES~gt~~KRl~~iGventeen 55 (183)
...+++++.++|...=+.+=..+.|.|-.+| +.+.|..+|+..+++.
T Consensus 14 ~~~l~~~~~~~l~~~F~~~D~~~~G~i~~~e----~~~~l~~~~~~~~~~~ 60 (161)
T 3fwb_A 14 NSELLEEQKQEIYEAFSLFDMNNDGFLDYHE----LKVAMKALGFELPKRE 60 (161)
T ss_dssp TTTSCHHHHHHHHHHHHHHCTTSSSEECHHH----HHHHHHHTTCCCCHHH
T ss_pred CCCCCHHHHHHHHHHHHHHCCCCCCcCcHHH----HHHHHHHcCCCCCHHH
Confidence 5678999999999999999999999997776 6788888898866554
No 27
>3j04_B Myosin regulatory light chain 2, smooth muscle MA isoform; phosphorylation, 2D crystalline arrays, myosin regulation, M light chains, structural protein; 20.00A {Gallus gallus}
Probab=28.44 E-value=42 Score=22.92 Aligned_cols=44 Identities=18% Similarity=0.257 Sum_probs=35.7
Q ss_pred CChHHHHHHHHHHHHHhcCCCceEeecCCCCchHHHhhhcCCCCchhh
Q psy12531 8 PPPALQEELKKIAEAIVAPGKGILAADESVSTMGKRLQDIGCENTEEH 55 (183)
Q Consensus 8 ~~~~~~~eL~~ta~~i~a~GKGiLAaDES~gt~~KRl~~iGventeen 55 (183)
||+++.++|...=+.+=.++.|.|-.+| +.+.|..+|..-+++.
T Consensus 1 ls~~~~~~l~~~F~~~D~d~~G~i~~~e----l~~~l~~~g~~~~~~~ 44 (143)
T 3j04_B 1 FDQSQIQEFKEAFNMIDQNRDGFIDKED----LHDMLASMGKNPTDEY 44 (143)
T ss_dssp CCHHHHHHHHHHHTTTCSSCTTCCCHHH----HHHHHHHTSCCCCHHH
T ss_pred CCHHHHHHHHHHHHHhCCCCCCCcCHHH----HHHHHHHhCCCCCHHH
Confidence 5788889999988888889999997666 6788888898766544
No 28
>2oxl_A Hypothetical protein YMGB; bacterial protein, biofilm, acid resistance, DNA binding Pro dimer, gene regulation; HET: BOG; 1.80A {Escherichia coli}
Probab=28.02 E-value=37 Score=23.13 Aligned_cols=50 Identities=8% Similarity=0.109 Sum_probs=39.0
Q ss_pred hHHHHHHHHHHHHHhcCCCceEeecCCCCchHHHhhhcCCCCchhhHHhhhhhh
Q psy12531 10 PALQEELKKIAEAIVAPGKGILAADESVSTMGKRLQDIGCENTEEHRRLYRQLL 63 (183)
Q Consensus 10 ~~~~~eL~~ta~~i~a~GKGiLAaDES~gt~~KRl~~iGventeenRr~yRelL 63 (183)
+++++-|..+...|++.|+-+= +-.=|.|-+..+..+..++.-.-||++|
T Consensus 4 ~~E~e~Lg~iv~eil~~g~~vs----nKaIi~~LI~rLE~~~d~~~~d~yR~lL 53 (64)
T 2oxl_A 4 EEESAVLGQAVTNLMLSGDNVN----NKNIILSLIHSLETTSDILKADVIRKTL 53 (64)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCS----HHHHHHHHHHHHHTCCCHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHcCCCCc----HHHHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 5678899999999999886442 1122467788889999999999999987
No 29
>2lv7_A Calcium-binding protein 7; metal binding protein; NMR {Homo sapiens}
Probab=26.75 E-value=55 Score=22.64 Aligned_cols=46 Identities=20% Similarity=0.356 Sum_probs=37.6
Q ss_pred CCCChHHHHHHHHHHHHHhcCCCceEeecCCCCchHHHhhhcCCCCchhh
Q psy12531 6 NYPPPALQEELKKIAEAIVAPGKGILAADESVSTMGKRLQDIGCENTEEH 55 (183)
Q Consensus 6 ~~~~~~~~~eL~~ta~~i~a~GKGiLAaDES~gt~~KRl~~iGventeen 55 (183)
..++.++.++|++.=+.+=..+.|.|-.+| +.+.|+.+|..-+++.
T Consensus 28 ~~l~~~~~~el~~~F~~~D~d~~G~I~~~E----l~~~l~~lg~~~~~~e 73 (100)
T 2lv7_A 28 VDIPEDELEEIREAFKVFDRDGNGFISKQE----LGTAMRSLGYMPNEVE 73 (100)
T ss_dssp CCCCGGGHHHHHHHHHHTCSSCSSCBCHHH----HHHHHHHHTCCCCTTT
T ss_pred ccCCHHHHHHHHHHHHHHcCCCCCcCCHHH----HHHHHHHhCCCCCHHH
Confidence 457888999999999999899999997766 6788888998765543
No 30
>1fi6_A EH domain protein REPS1; EPS15 homology domain, EF hand, calcium, RAS signal transduction, endocytosis/exocytosis complex; NMR {Mus musculus} SCOP: a.39.1.6
Probab=25.76 E-value=79 Score=21.02 Aligned_cols=63 Identities=11% Similarity=0.054 Sum_probs=41.9
Q ss_pred CCChHHHHHHHHHHHHHhcCCCceEeecCCCCchHHHhhhcCCCCchhhHHhhhhhhcccCCCCCCceeeeecchh
Q psy12531 7 YPPPALQEELKKIAEAIVAPGKGILAADESVSTMGKRLQDIGCENTEEHRRLYRQLLFTSDKVIGDNISGVILFHE 82 (183)
Q Consensus 7 ~~~~~~~~eL~~ta~~i~a~GKGiLAaDES~gt~~KRl~~iGventeenRr~yRelL~tt~~~~~~~IsGvILfeE 82 (183)
.+++++.+++++.=+.+=..+.|.|-.+| +..-|...|+.. ++-+.-+++ .+.. -.|.|=|+|
T Consensus 2 ~ls~~~~~~~~~~F~~~D~d~dG~I~~~e----l~~~l~~~g~~~-~~~~~i~~~----~D~d----~dG~i~~~E 64 (92)
T 1fi6_A 2 KITDEQRQYYVNQFKTIQPDLNGFIPGSA----AKEFFTKSKLPI-LELSHIWEL----SDFD----KDGALTLDE 64 (92)
T ss_dssp CCCHHHHHHHHHHHTTTCCSTTCEEEHHH----HHHHHHHHSSCH-HHHHHHHHH----HCTT----CSSEEEHHH
T ss_pred CCCHHHHHHHHHHHHHHCCCCCCcCcHHH----HHHHHHHcCCCH-HHHHHHHHH----HCCC----CCCCCCHHH
Confidence 36788888999888888889999998877 566677778653 333333332 2211 145677777
No 31
>4ds7_A Calmodulin, CAM; protein binding, metal binding, structura; 2.15A {Kluyveromyces lactis} PDB: 1lkj_A 2lhh_A 1f54_A 1f55_A
Probab=23.08 E-value=1.7e+02 Score=19.50 Aligned_cols=46 Identities=15% Similarity=0.222 Sum_probs=37.8
Q ss_pred CCCChHHHHHHHHHHHHHhcCCCceEeecCCCCchHHHhhhcCCCCchhh
Q psy12531 6 NYPPPALQEELKKIAEAIVAPGKGILAADESVSTMGKRLQDIGCENTEEH 55 (183)
Q Consensus 6 ~~~~~~~~~eL~~ta~~i~a~GKGiLAaDES~gt~~KRl~~iGventeen 55 (183)
..+++++.++|...=+.+=..+.|.|-.+| +.+.|..+|...+++.
T Consensus 3 ~~l~~~~~~~l~~~F~~~D~~~~G~i~~~e----~~~~l~~~~~~~~~~~ 48 (147)
T 4ds7_A 3 QNLTEEQIAEFKEAFALFDKDNSGSISASE----LATVMRSLGLSPSEAE 48 (147)
T ss_dssp -CCCHHHHHHHHHHHHHHCTTCSSEEEHHH----HHHHHHHTTCCCCHHH
T ss_pred CcCCHHHHHHHHHHHHHHCCCCCCCcCHHH----HHHHHHHhCCCCCHHH
Confidence 457899999999999999999999997766 6777888888766654
No 32
>2jnf_A Troponin C; stretch activated muscle contraction, EF-hand, metal binding protein; NMR {Lethocerus indicus} PDB: 2k2a_A
Probab=22.56 E-value=1.6e+02 Score=20.16 Aligned_cols=48 Identities=17% Similarity=0.233 Sum_probs=38.7
Q ss_pred CCCCCChHHHHHHHHHHHHHh-cCCCceEeecCCCCchHHHhhhcCCCCchhh
Q psy12531 4 YFNYPPPALQEELKKIAEAIV-APGKGILAADESVSTMGKRLQDIGCENTEEH 55 (183)
Q Consensus 4 ~~~~~~~~~~~eL~~ta~~i~-a~GKGiLAaDES~gt~~KRl~~iGventeen 55 (183)
....|++++.++|...=+.+= ..+.|.|-.+| +.+.|..+|+..+++.
T Consensus 3 ~~~~l~~~~~~~l~~~F~~~D~~~~~G~i~~~e----~~~~l~~~~~~~~~~~ 51 (158)
T 2jnf_A 3 DVSKLSSNQVKLLETAFRDFETPEGSGRVSTDQ----IGIILEVLGIQQTKST 51 (158)
T ss_dssp CSTTSCHHHHHHHHHHHHHSBCSSSCSSEEHHH----HHHHHHHTTCSCSHHH
T ss_pred chhhCCHHHHHHHHHHHHHhCCCCCCCcCcHHH----HHHHHHHhCCCCCHHH
Confidence 456789999999999999888 89999997766 5677888888766543
No 33
>1nsj_A PRAI, phosphoribosyl anthranilate isomerase; thermostability; 2.00A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1lbm_A 1dl3_A
Probab=22.09 E-value=48 Score=26.59 Aligned_cols=29 Identities=34% Similarity=0.643 Sum_probs=20.9
Q ss_pred eeccCCCCHHHHHHHhHHHhccCCCCCceeeeecc
Q psy12531 146 TFLSGGQSEEEASVNLDAINKYSGKKPWALTFSYG 180 (183)
Q Consensus 146 ~FLSGGqsee~At~~LnaiN~~~~~~PW~LsFSyg 180 (183)
+||+||.+.|....-+... .||.+-.|=|
T Consensus 154 ~~LAGGL~peNV~~ai~~~------~p~gVDvsSG 182 (205)
T 1nsj_A 154 LVLSGGLNPENVRSAIDVV------RPFAVDVSSG 182 (205)
T ss_dssp EEEESSCCTTTHHHHHHHH------CCSEEEESGG
T ss_pred EEEECCCCHHHHHHHHHhc------CCCEEEECCc
Confidence 7999999999765544433 4888877643
No 34
>3k21_A PFCDPK3, calcium-dependent protein kinase 3; calcium kinase structural genomics malaria, structural genom consortium, SGC, ATP-binding; 1.15A {Plasmodium falciparum} PDB: 3o4y_A
Probab=21.74 E-value=1.2e+02 Score=22.43 Aligned_cols=63 Identities=25% Similarity=0.265 Sum_probs=43.8
Q ss_pred CChHHHHHHHHHHHHHhcCCCceEeecCCCCchHHHhhhcCCCCchhhHHhhhhhhcccCCCCCCceeeeecchh
Q psy12531 8 PPPALQEELKKIAEAIVAPGKGILAADESVSTMGKRLQDIGCENTEEHRRLYRQLLFTSDKVIGDNISGVILFHE 82 (183)
Q Consensus 8 ~~~~~~~eL~~ta~~i~a~GKGiLAaDES~gt~~KRl~~iGventeenRr~yRelL~tt~~~~~~~IsGvILfeE 82 (183)
+++++.++|.+.=+.+=.++.|.|-.+| +.+.|..+|+..+++-++.++.+ .. .-.|.|-|+|
T Consensus 46 l~~~~~~~l~~~F~~~D~d~~G~i~~~E----l~~~l~~~g~~~~~~~~~l~~~~--D~------d~~g~i~~~E 108 (191)
T 3k21_A 46 SNDYDVEKLKSTFLVLDEDGKGYITKEQ----LKKGLEKDGLKLPYNFDLLLDQI--DS------DGSGKIDYTE 108 (191)
T ss_dssp CCCHHHHHHHHHHHHHCTTCSSEECHHH----HHHHHHHTTCCCCTTHHHHHHHH--CT------TCSSSEEHHH
T ss_pred CCHHHHHHHHHHHHHHCCCCCCCCcHHH----HHHHHHHcCCCcHHHHHHHHHHh--CC------CCCCeEeHHH
Confidence 5677888888888888899999996665 67788888888765554444432 11 1245567777
No 35
>2xv9_A ABA-1A1 repeat UNIT; lipid binding protein, fatty acid binding, retinol binding,; NMR {Ascaris suum}
Probab=21.42 E-value=59 Score=25.15 Aligned_cols=19 Identities=21% Similarity=0.326 Sum_probs=15.4
Q ss_pred CCCCCCCChHHHHHHHHHH
Q psy12531 2 TTYFNYPPPALQEELKKIA 20 (183)
Q Consensus 2 ~~~~~~~~~~~~~eL~~ta 20 (183)
-++..|||++|++||...-
T Consensus 15 ~~~LsWLt~eQk~EI~kMk 33 (134)
T 2xv9_A 15 DTHLKWLSQEQKDELLKMK 33 (134)
T ss_dssp TTTTTTSCHHHHHHHHHHH
T ss_pred HHHHHHCCHHHHHHHHHHH
Confidence 3578999999999987643
No 36
>2yvq_A Carbamoyl-phosphate synthase; conserved hypothetical protein, structural genomics, NPPSFA; 1.98A {Homo sapiens}
Probab=21.02 E-value=79 Score=23.64 Aligned_cols=41 Identities=15% Similarity=0.201 Sum_probs=32.1
Q ss_pred ChHHHHHHHHHHHHHhcCCCceEeecCCCCchHHHhhhcCCCCch
Q psy12531 9 PPALQEELKKIAEAIVAPGKGILAADESVSTMGKRLQDIGCENTE 53 (183)
Q Consensus 9 ~~~~~~eL~~ta~~i~a~GKGiLAaDES~gt~~KRl~~iGvente 53 (183)
....|+++...|+++..-|=-|+|. +.+.+.|+..||+-+.
T Consensus 32 ~d~dK~~l~~~a~~l~~lGf~i~AT----~GTa~~L~~~Gi~v~~ 72 (143)
T 2yvq_A 32 QQSFRPRFLGVAEQLHNEGFKLFAT----EATSDWLNANNVPATP 72 (143)
T ss_dssp CGGGHHHHHHHHHHHHTTTCEEEEE----HHHHHHHHHTTCCCEE
T ss_pred cccchHHHHHHHHHHHHCCCEEEEC----chHHHHHHHcCCeEEE
Confidence 3446788999999999998888864 4568899988887543
No 37
>1exr_A Calmodulin; high resolution, disorder, metal transport; 1.00A {Paramecium tetraurelia} SCOP: a.39.1.5 PDB: 1n0y_A 1osa_A 1clm_A 1mxe_A 2bbm_A 2bbn_A 4cln_A 4djc_A 2wel_D* 2x51_B 2vas_B* 2bkh_B 3gn4_B 3l9i_C 2ygg_B* 2w73_A 1lvc_D* 1wrz_A 2bki_B 2r28_A ...
Probab=20.93 E-value=1.8e+02 Score=19.88 Aligned_cols=45 Identities=20% Similarity=0.311 Sum_probs=36.6
Q ss_pred CCChHHHHHHHHHHHHHhcCCCceEeecCCCCchHHHhhhcCCCCchhh
Q psy12531 7 YPPPALQEELKKIAEAIVAPGKGILAADESVSTMGKRLQDIGCENTEEH 55 (183)
Q Consensus 7 ~~~~~~~~eL~~ta~~i~a~GKGiLAaDES~gt~~KRl~~iGventeen 55 (183)
.|++++.++|+..-+.+=..+.|.|-.+| +...|..+|...+++.
T Consensus 3 ~l~~~~~~~l~~~F~~~D~d~~G~i~~~e----l~~~l~~~g~~~~~~~ 47 (148)
T 1exr_A 3 QLTEEQIAEFKEAFALFDKDGDGTITTKE----LGTVMRSLGQNPTEAE 47 (148)
T ss_dssp CCCHHHHHHHHHHHHHHCTTCSSEECHHH----HHHHHHHHTCCCCHHH
T ss_pred cCCHHHHHHHHHHHHHHCCCCCCcCcHHH----HHHHHHHcCCCCCHHH
Confidence 57889999999999999899999997766 5677888888766543
No 38
>1top_A Troponin C; contractIle system protein; 1.78A {Gallus gallus} SCOP: a.39.1.5 PDB: 1ncy_A 1ncz_A 1ncx_A 1ytz_C* 1yv0_C 1tnw_A 1tnx_A 5tnc_A 2w49_0 2w4u_0 4tnc_A 1a2x_A 1tcf_A 1tn4_A 2tn4_A 1aj4_A 1jc2_A 1fi5_A 1sbj_A 1scv_A ...
Probab=20.74 E-value=2e+02 Score=19.66 Aligned_cols=65 Identities=23% Similarity=0.359 Sum_probs=45.1
Q ss_pred CCChHHHHHHHHHHHHHhcCCCceEeecCCCCchHHHhhhcCCCCchhhH-HhhhhhhcccCCCCCCceeeeecchhh
Q psy12531 7 YPPPALQEELKKIAEAIVAPGKGILAADESVSTMGKRLQDIGCENTEEHR-RLYRQLLFTSDKVIGDNISGVILFHET 83 (183)
Q Consensus 7 ~~~~~~~~eL~~ta~~i~a~GKGiLAaDES~gt~~KRl~~iGventeenR-r~yRelL~tt~~~~~~~IsGvILfeET 83 (183)
.+++++.++|...=+.+=..+.|.|-.+| +.+.|..+|+..+++.- ..++.+ .. .-.|.|-|+|=
T Consensus 13 ~ls~~~~~~l~~~F~~~D~d~~G~i~~~e----~~~~l~~~~~~~~~~~~~~~~~~~--d~------~~~g~i~~~ef 78 (162)
T 1top_A 13 FLSEEMIAEFKAAFDMFDADGGGDISTKE----LGTVMRMLGQNPTKEELDAIIEEV--DE------DGSGTIDFEEF 78 (162)
T ss_dssp HSCHHHHHHHHHHHHTTTCSCSSEEEGGG----HHHHHHHTTCCCCHHHHHHHHHHH--CT------TSCCEEEHHHH
T ss_pred hcCHHHHHHHHHHHHHHCCCCCCcCCHHH----HHHHHHHcCCCCCHHHHHHHHHHH--cC------CCCCcEeHHHH
Confidence 47888889999999888889999997666 67788888987665433 233322 11 12466777773
Done!