Query psy12533
Match_columns 567
No_of_seqs 315 out of 545
Neff 5.1
Searched_HMMs 46136
Date Fri Aug 16 21:45:39 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy12533.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/12533hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2116|consensus 100.0 4E-100 8E-105 824.2 20.5 258 30-287 477-738 (738)
2 KOG2116|consensus 100.0 2.1E-97 5E-102 802.8 20.5 262 301-562 473-738 (738)
3 COG5083 SMP2 Uncharacterized p 100.0 2.5E-72 5.4E-77 586.1 15.5 233 32-268 327-560 (580)
4 COG5083 SMP2 Uncharacterized p 100.0 1.9E-71 4.1E-76 579.6 15.2 245 306-556 326-574 (580)
5 PF08235 LNS2: LNS2 (Lipin/Ned 100.0 3.5E-62 7.5E-67 459.9 13.6 157 360-516 1-157 (157)
6 PF08235 LNS2: LNS2 (Lipin/Ned 100.0 4.3E-61 9.2E-66 452.5 13.5 157 85-241 1-157 (157)
7 smart00775 LNS2 LNS2 domain. T 100.0 6.2E-44 1.3E-48 336.0 15.0 156 360-515 1-156 (157)
8 smart00775 LNS2 LNS2 domain. T 100.0 6.8E-44 1.5E-48 335.7 14.6 156 85-240 1-156 (157)
9 PHA02530 pseT polynucleotide k 99.0 5.1E-10 1.1E-14 114.2 7.4 178 38-226 108-292 (300)
10 PHA02530 pseT polynucleotide k 99.0 6.2E-10 1.3E-14 113.5 7.7 136 355-501 155-292 (300)
11 COG4850 Uncharacterized conser 99.0 2.1E-09 4.6E-14 111.5 10.7 169 48-232 128-308 (373)
12 TIGR01689 EcbF-BcbF capsule bi 98.8 2.7E-08 5.8E-13 91.6 9.5 102 359-474 2-120 (126)
13 PF09949 DUF2183: Uncharacteri 98.7 2.8E-08 6E-13 88.2 7.6 93 129-231 1-94 (100)
14 TIGR01689 EcbF-BcbF capsule bi 98.7 5.7E-08 1.2E-12 89.5 9.2 105 84-198 2-119 (126)
15 cd01427 HAD_like Haloacid deha 98.7 8.2E-08 1.8E-12 83.1 9.8 127 360-501 1-136 (139)
16 TIGR01675 plant-AP plant acid 98.7 2.3E-07 5E-12 93.4 12.4 127 356-506 75-220 (229)
17 cd01427 HAD_like Haloacid deha 98.6 1.3E-07 2.9E-12 81.9 9.1 126 85-225 1-135 (139)
18 TIGR01680 Veg_Stor_Prot vegeta 98.6 1.4E-07 3.1E-12 96.9 10.4 128 357-507 100-248 (275)
19 TIGR01675 plant-AP plant acid 98.6 4.3E-07 9.3E-12 91.5 11.1 127 83-231 77-220 (229)
20 PF03767 Acid_phosphat_B: HAD 98.5 4.2E-08 9.1E-13 98.4 3.2 135 356-506 70-220 (229)
21 TIGR01680 Veg_Stor_Prot vegeta 98.5 5.1E-07 1.1E-11 92.9 10.8 130 82-232 100-248 (275)
22 PF03767 Acid_phosphat_B: HAD 98.4 1.5E-07 3.4E-12 94.3 2.8 135 81-231 70-220 (229)
23 PRK11009 aphA acid phosphatase 98.3 2.3E-06 4.9E-11 86.6 10.1 122 360-506 65-212 (237)
24 COG4850 Uncharacterized conser 98.3 4.5E-06 9.8E-11 87.2 11.2 164 324-507 129-308 (373)
25 PRK11009 aphA acid phosphatase 98.2 4.6E-06 1E-10 84.4 9.2 122 85-231 65-212 (237)
26 TIGR01533 lipo_e_P4 5'-nucleot 98.2 5.4E-06 1.2E-10 85.3 9.6 116 356-496 73-206 (266)
27 TIGR01533 lipo_e_P4 5'-nucleot 98.2 5.5E-06 1.2E-10 85.2 8.9 115 82-221 74-206 (266)
28 TIGR01662 HAD-SF-IIIA HAD-supe 98.2 1.2E-05 2.5E-10 72.5 9.9 121 359-501 1-127 (132)
29 TIGR01662 HAD-SF-IIIA HAD-supe 98.1 1.2E-05 2.6E-10 72.5 9.0 120 84-226 1-127 (132)
30 TIGR01672 AphA HAD superfamily 98.1 1.4E-05 3E-10 80.9 9.8 121 360-504 65-210 (237)
31 TIGR01672 AphA HAD superfamily 98.0 4.2E-05 9.2E-10 77.5 10.3 121 85-229 65-210 (237)
32 PF09949 DUF2183: Uncharacteri 97.8 7.2E-05 1.6E-09 66.5 7.6 94 404-507 1-95 (100)
33 TIGR01656 Histidinol-ppas hist 97.8 0.00016 3.5E-09 67.0 9.7 127 359-500 1-140 (147)
34 TIGR01664 DNA-3'-Pase DNA 3'-p 97.8 0.00019 4.2E-09 68.6 10.5 128 357-501 12-158 (166)
35 TIGR01670 YrbI-phosphatas 3-de 97.7 0.00012 2.5E-09 68.8 7.9 139 359-535 2-148 (154)
36 PRK13582 thrH phosphoserine ph 97.7 0.00015 3.3E-09 69.6 8.7 94 388-500 70-166 (205)
37 PRK10976 putative hydrolase; P 97.7 0.00014 3E-09 73.0 8.6 80 359-458 3-82 (266)
38 TIGR01664 DNA-3'-Pase DNA 3'-p 97.6 0.00037 8E-09 66.6 10.1 126 82-226 12-158 (166)
39 PLN02954 phosphoserine phospha 97.6 0.00021 4.7E-09 69.6 8.6 100 388-500 86-191 (224)
40 PRK01158 phosphoglycolate phos 97.6 0.00026 5.5E-09 69.2 8.6 68 358-445 3-70 (230)
41 TIGR01656 Histidinol-ppas hist 97.6 0.00042 9.2E-09 64.2 9.4 127 84-225 1-140 (147)
42 TIGR01670 YrbI-phosphatas 3-de 97.6 0.00018 4E-09 67.5 6.9 108 84-225 2-114 (154)
43 PRK13582 thrH phosphoserine ph 97.5 0.00032 7E-09 67.3 8.5 95 113-226 70-167 (205)
44 PF08282 Hydrolase_3: haloacid 97.5 0.0002 4.2E-09 69.1 6.9 91 361-471 1-93 (254)
45 COG0561 Cof Predicted hydrolas 97.5 0.00033 7.1E-09 70.4 8.7 80 358-458 3-82 (264)
46 PRK10530 pyridoxal phosphate ( 97.5 0.00034 7.4E-09 70.0 8.6 81 358-458 3-84 (272)
47 PLN02954 phosphoserine phospha 97.5 0.00026 5.6E-09 69.0 7.5 100 113-225 86-191 (224)
48 PRK08942 D,D-heptose 1,7-bisph 97.5 0.0012 2.7E-08 62.9 12.0 128 358-500 3-142 (181)
49 PRK09484 3-deoxy-D-manno-octul 97.5 0.00033 7.1E-09 67.6 8.0 110 357-500 20-134 (183)
50 TIGR01487 SPP-like sucrose-pho 97.5 0.00025 5.3E-09 69.2 7.1 68 359-446 2-69 (215)
51 TIGR01491 HAD-SF-IB-PSPlk HAD- 97.5 0.00055 1.2E-08 65.0 9.3 106 113-240 82-196 (201)
52 TIGR01491 HAD-SF-IB-PSPlk HAD- 97.5 0.00063 1.4E-08 64.6 9.6 106 388-515 82-196 (201)
53 PRK15126 thiamin pyrimidine py 97.5 0.00021 4.5E-09 72.2 6.6 80 359-458 3-82 (272)
54 PRK10976 putative hydrolase; P 97.5 0.00036 7.7E-09 70.1 8.2 68 84-171 3-70 (266)
55 TIGR01261 hisB_Nterm histidino 97.5 0.00062 1.3E-08 64.9 9.3 130 358-501 1-143 (161)
56 TIGR00338 serB phosphoserine p 97.5 0.00022 4.7E-09 69.3 6.3 103 388-510 87-196 (219)
57 TIGR00213 GmhB_yaeD D,D-heptos 97.4 0.001 2.2E-08 63.4 10.6 132 359-501 2-146 (176)
58 PF08282 Hydrolase_3: haloacid 97.4 0.00018 3.8E-09 69.4 4.9 89 86-196 1-89 (254)
59 TIGR00338 serB phosphoserine p 97.4 0.00026 5.6E-09 68.8 5.9 105 113-235 87-196 (219)
60 TIGR01487 SPP-like sucrose-pho 97.4 0.00041 8.8E-09 67.7 7.1 68 84-171 2-69 (215)
61 PRK03669 mannosyl-3-phosphogly 97.4 0.00046 9.9E-09 70.1 7.6 71 357-446 6-76 (271)
62 PRK01158 phosphoglycolate phos 97.4 0.00042 9.1E-09 67.7 7.0 67 84-170 4-70 (230)
63 PRK15126 thiamin pyrimidine py 97.3 0.00061 1.3E-08 68.8 8.1 68 84-171 3-70 (272)
64 PRK10513 sugar phosphate phosp 97.3 0.00051 1.1E-08 69.0 7.5 82 358-458 3-87 (270)
65 COG0561 Cof Predicted hydrolas 97.3 0.00037 7.9E-09 70.0 5.7 80 83-183 3-82 (264)
66 TIGR02463 MPGP_rel mannosyl-3- 97.3 0.00055 1.2E-08 66.9 6.7 68 360-446 1-68 (221)
67 TIGR01261 hisB_Nterm histidino 97.3 0.0012 2.6E-08 62.9 8.8 131 83-227 1-144 (161)
68 PRK08942 D,D-heptose 1,7-bisph 97.3 0.003 6.5E-08 60.3 11.4 130 83-225 3-142 (181)
69 PF15017 AF1Q: Drug resistance 97.2 0.0001 2.2E-09 64.0 1.0 33 532-564 4-36 (87)
70 PRK09484 3-deoxy-D-manno-octul 97.2 0.00073 1.6E-08 65.2 7.0 108 82-225 20-134 (183)
71 TIGR00099 Cof-subfamily Cof su 97.2 0.0015 3.2E-08 65.4 9.3 67 360-446 1-67 (256)
72 TIGR01458 HAD-SF-IIA-hyp3 HAD- 97.2 0.00078 1.7E-08 68.5 7.3 58 359-425 2-60 (257)
73 PRK03669 mannosyl-3-phosphogly 97.2 0.00084 1.8E-08 68.2 7.4 70 82-170 6-75 (271)
74 TIGR00213 GmhB_yaeD D,D-heptos 97.2 0.0021 4.6E-08 61.2 9.5 132 84-226 2-146 (176)
75 PRK10530 pyridoxal phosphate ( 97.2 0.00099 2.1E-08 66.7 7.2 69 83-171 3-71 (272)
76 PRK10513 sugar phosphate phosp 97.1 0.001 2.2E-08 66.9 7.2 72 83-171 3-74 (270)
77 PRK13478 phosphonoacetaldehyde 97.1 0.0033 7.1E-08 63.7 10.8 97 388-501 103-199 (267)
78 TIGR01482 SPP-subfamily Sucros 97.1 0.00084 1.8E-08 65.3 6.3 64 361-444 1-64 (225)
79 TIGR01458 HAD-SF-IIA-hyp3 HAD- 97.1 0.0011 2.4E-08 67.4 7.3 62 84-159 2-64 (257)
80 TIGR02463 MPGP_rel mannosyl-3- 97.1 0.001 2.2E-08 65.0 6.6 68 85-171 1-68 (221)
81 PRK09552 mtnX 2-hydroxy-3-keto 97.1 0.00087 1.9E-08 65.9 6.1 97 387-500 75-182 (219)
82 PRK10444 UMP phosphatase; Prov 97.1 0.00078 1.7E-08 68.4 5.8 69 359-442 2-70 (248)
83 PF15017 AF1Q: Drug resistance 97.1 0.0002 4.4E-09 62.2 1.3 33 257-289 4-36 (87)
84 PRK09552 mtnX 2-hydroxy-3-keto 97.1 0.0014 3E-08 64.5 7.1 96 113-225 76-182 (219)
85 PRK13478 phosphonoacetaldehyde 97.1 0.0034 7.3E-08 63.6 10.0 96 113-226 103-199 (267)
86 PRK00192 mannosyl-3-phosphogly 97.0 0.0013 2.9E-08 66.8 7.1 68 358-445 4-71 (273)
87 PRK08238 hypothetical protein; 97.0 0.0031 6.7E-08 70.1 10.0 130 357-515 9-172 (479)
88 TIGR01486 HAD-SF-IIB-MPGP mann 97.0 0.0014 3.1E-08 65.7 6.6 67 360-446 1-67 (256)
89 PRK10444 UMP phosphatase; Prov 96.9 0.0014 2.9E-08 66.7 6.0 66 84-164 2-67 (248)
90 TIGR01490 HAD-SF-IB-hyp1 HAD-s 96.9 0.0022 4.7E-08 61.5 6.7 109 113-237 89-201 (202)
91 TIGR00099 Cof-subfamily Cof su 96.9 0.0028 6E-08 63.4 7.5 67 85-171 1-67 (256)
92 PRK12702 mannosyl-3-phosphogly 96.9 0.0027 5.9E-08 66.6 7.5 118 359-501 2-137 (302)
93 PF13344 Hydrolase_6: Haloacid 96.8 0.0015 3.3E-08 57.6 4.8 53 361-425 1-53 (101)
94 TIGR01545 YfhB_g-proteo haloac 96.8 0.0031 6.7E-08 62.5 7.3 111 388-515 96-208 (210)
95 TIGR01482 SPP-subfamily Sucros 96.8 0.002 4.4E-08 62.6 5.9 65 86-170 1-65 (225)
96 PRK00192 mannosyl-3-phosphogly 96.8 0.0026 5.6E-08 64.7 6.8 68 83-170 4-71 (273)
97 TIGR01663 PNK-3'Pase polynucle 96.8 0.0048 1E-07 69.4 9.5 58 355-413 165-224 (526)
98 TIGR01486 HAD-SF-IIB-MPGP mann 96.8 0.0024 5.2E-08 64.1 6.4 66 85-170 1-66 (256)
99 TIGR02461 osmo_MPG_phos mannos 96.8 0.0029 6.3E-08 63.2 6.8 51 360-425 1-51 (225)
100 PLN02887 hydrolase family prot 96.7 0.0045 9.7E-08 70.4 8.6 63 349-425 299-361 (580)
101 TIGR01545 YfhB_g-proteo haloac 96.7 0.0033 7.1E-08 62.3 6.6 111 113-240 96-208 (210)
102 PRK05446 imidazole glycerol-ph 96.7 0.011 2.3E-07 63.6 11.0 136 358-510 2-150 (354)
103 PRK12702 mannosyl-3-phosphogly 96.7 0.0031 6.6E-08 66.2 6.6 51 84-145 2-52 (302)
104 PTZ00174 phosphomannomutase; P 96.7 0.0023 5E-08 64.4 5.6 54 357-424 4-57 (247)
105 PLN02645 phosphoglycolate phos 96.7 0.0033 7.2E-08 65.6 6.8 60 357-431 27-86 (311)
106 TIGR01452 PGP_euk phosphoglyco 96.6 0.0033 7.2E-08 64.3 6.0 61 359-434 3-63 (279)
107 TIGR02461 osmo_MPG_phos mannos 96.6 0.0045 9.7E-08 61.8 6.7 65 85-170 1-65 (225)
108 PRK13222 phosphoglycolate phos 96.6 0.013 2.9E-07 56.7 9.9 94 113-226 95-189 (226)
109 PF08645 PNK3P: Polynucleotide 96.6 0.0033 7.1E-08 59.9 5.5 52 359-411 1-54 (159)
110 TIGR01428 HAD_type_II 2-haloal 96.6 0.0089 1.9E-07 57.3 8.4 99 113-237 94-196 (198)
111 TIGR01488 HAD-SF-IB Haloacid D 96.6 0.006 1.3E-07 56.9 6.8 99 387-497 74-177 (177)
112 PF13344 Hydrolase_6: Haloacid 96.5 0.0076 1.6E-07 53.2 6.9 53 86-150 1-53 (101)
113 TIGR01663 PNK-3'Pase polynucle 96.5 0.0092 2E-07 67.1 9.2 58 80-138 165-224 (526)
114 PTZ00174 phosphomannomutase; P 96.5 0.0037 8.1E-08 62.9 5.5 47 82-139 4-50 (247)
115 TIGR01488 HAD-SF-IB Haloacid D 96.5 0.0066 1.4E-07 56.6 6.7 98 113-222 75-177 (177)
116 TIGR01422 phosphonatase phosph 96.5 0.015 3.3E-07 58.1 9.7 96 114-226 102-197 (253)
117 TIGR01428 HAD_type_II 2-haloal 96.5 0.01 2.2E-07 56.9 8.0 102 387-512 93-196 (198)
118 PRK13226 phosphoglycolate phos 96.5 0.01 2.2E-07 58.8 8.3 94 388-501 97-191 (229)
119 PLN02645 phosphoglycolate phos 96.5 0.0057 1.2E-07 63.9 6.7 57 82-150 27-83 (311)
120 TIGR01452 PGP_euk phosphoglyco 96.5 0.005 1.1E-07 63.1 6.1 55 84-150 3-57 (279)
121 PRK08238 hypothetical protein; 96.5 0.011 2.3E-07 66.0 9.0 128 83-239 10-171 (479)
122 TIGR01681 HAD-SF-IIIC HAD-supe 96.5 0.0054 1.2E-07 55.9 5.7 57 359-416 1-60 (128)
123 PRK05446 imidazole glycerol-ph 96.4 0.019 4E-07 61.8 10.5 135 83-235 2-150 (354)
124 TIGR01489 DKMTPPase-SF 2,3-dik 96.4 0.0097 2.1E-07 55.8 7.4 101 388-500 74-184 (188)
125 TIGR01422 phosphonatase phosph 96.4 0.022 4.9E-07 56.9 10.4 97 388-501 101-197 (253)
126 TIGR02726 phenyl_P_delta pheny 96.4 0.0084 1.8E-07 57.9 7.1 110 358-500 7-120 (169)
127 PRK11133 serB phosphoserine ph 96.4 0.0044 9.5E-08 65.6 5.5 128 387-532 182-312 (322)
128 PF12710 HAD: haloacid dehalog 96.4 0.0021 4.5E-08 60.5 2.6 93 114-219 88-191 (192)
129 PF12710 HAD: haloacid dehalog 96.4 0.0019 4.1E-08 60.8 2.2 94 389-495 88-192 (192)
130 TIGR01668 YqeG_hyp_ppase HAD s 96.4 0.021 4.6E-07 54.5 9.3 116 355-510 22-138 (170)
131 PRK13226 phosphoglycolate phos 96.3 0.012 2.6E-07 58.3 7.9 94 113-226 97-191 (229)
132 PF08645 PNK3P: Polynucleotide 96.3 0.0057 1.2E-07 58.3 5.4 51 84-135 1-53 (159)
133 TIGR01681 HAD-SF-IIIC HAD-supe 96.3 0.0081 1.8E-07 54.8 5.8 57 84-141 1-60 (128)
134 PRK11133 serB phosphoserine ph 96.2 0.0055 1.2E-07 64.8 5.0 127 113-257 183-312 (322)
135 TIGR01485 SPP_plant-cyano sucr 96.2 0.0076 1.6E-07 60.4 5.8 55 85-150 3-57 (249)
136 TIGR01457 HAD-SF-IIA-hyp2 HAD- 96.2 0.011 2.4E-07 59.8 6.8 69 359-442 2-70 (249)
137 TIGR01484 HAD-SF-IIB HAD-super 96.2 0.0087 1.9E-07 57.6 5.8 47 360-416 1-47 (204)
138 TIGR01485 SPP_plant-cyano sucr 96.2 0.0082 1.8E-07 60.2 5.7 56 359-425 2-57 (249)
139 TIGR01668 YqeG_hyp_ppase HAD s 96.2 0.03 6.5E-07 53.4 9.2 116 80-235 22-138 (170)
140 TIGR01457 HAD-SF-IIA-hyp2 HAD- 96.1 0.014 3E-07 59.1 7.1 55 84-150 2-56 (249)
141 TIGR03333 salvage_mtnX 2-hydro 96.1 0.024 5.1E-07 55.7 8.5 93 112-224 71-177 (214)
142 COG0560 SerB Phosphoserine pho 96.1 0.01 2.2E-07 59.1 6.0 116 387-516 78-194 (212)
143 TIGR03333 salvage_mtnX 2-hydro 96.1 0.018 3.9E-07 56.5 7.6 93 387-499 71-177 (214)
144 TIGR02726 phenyl_P_delta pheny 96.1 0.016 3.5E-07 56.0 6.9 111 83-226 7-121 (169)
145 PRK13223 phosphoglycolate phos 96.0 0.023 5E-07 58.2 8.4 93 388-501 103-197 (272)
146 TIGR02252 DREG-2 REG-2-like, H 96.0 0.03 6.6E-07 53.7 8.7 25 113-137 107-131 (203)
147 PLN02887 hydrolase family prot 96.0 0.0073 1.6E-07 68.7 5.0 64 73-150 298-361 (580)
148 TIGR01489 DKMTPPase-SF 2,3-dik 96.0 0.025 5.4E-07 53.0 7.8 100 114-225 75-184 (188)
149 TIGR01484 HAD-SF-IIB HAD-super 96.0 0.012 2.6E-07 56.7 5.8 47 85-141 1-47 (204)
150 PRK06769 hypothetical protein; 96.0 0.043 9.2E-07 52.6 9.4 124 358-501 4-133 (173)
151 TIGR01684 viral_ppase viral ph 95.9 0.022 4.7E-07 59.9 7.5 67 352-435 121-187 (301)
152 PRK14988 GMP/IMP nucleotidase; 95.9 0.021 4.6E-07 56.7 7.2 91 113-226 95-189 (224)
153 TIGR02252 DREG-2 REG-2-like, H 95.8 0.046 1E-06 52.5 9.0 92 388-501 107-201 (203)
154 PRK14988 GMP/IMP nucleotidase; 95.8 0.018 3.8E-07 57.3 6.3 93 388-501 95-189 (224)
155 PRK14502 bifunctional mannosyl 95.8 0.022 4.7E-07 65.8 7.4 54 358-425 416-469 (694)
156 TIGR01549 HAD-SF-IA-v1 haloaci 95.8 0.023 5E-07 52.0 6.3 87 114-223 67-154 (154)
157 PLN02779 haloacid dehalogenase 95.8 0.027 5.9E-07 58.2 7.5 94 113-226 146-242 (286)
158 PLN02779 haloacid dehalogenase 95.7 0.03 6.6E-07 57.9 7.7 94 388-501 146-242 (286)
159 PRK06769 hypothetical protein; 95.6 0.065 1.4E-06 51.3 9.1 122 82-226 3-133 (173)
160 PHA03398 viral phosphatase sup 95.6 0.037 7.9E-07 58.3 7.8 120 358-506 128-256 (303)
161 TIGR02137 HSK-PSP phosphoserin 95.5 0.034 7.3E-07 55.0 6.9 123 387-534 69-197 (203)
162 PRK13223 phosphoglycolate phos 95.5 0.041 8.9E-07 56.4 7.6 91 113-226 103-197 (272)
163 PF05116 S6PP: Sucrose-6F-phos 95.5 0.011 2.4E-07 59.9 3.4 55 358-434 2-59 (247)
164 PRK13225 phosphoglycolate phos 95.5 0.025 5.3E-07 58.4 5.9 91 388-501 144-235 (273)
165 TIGR01459 HAD-SF-IIA-hyp4 HAD- 95.4 0.21 4.6E-06 49.9 12.2 108 357-499 7-116 (242)
166 TIGR01549 HAD-SF-IA-v1 haloaci 95.4 0.035 7.6E-07 50.8 6.0 88 389-498 67-154 (154)
167 TIGR02471 sucr_syn_bact_C sucr 95.3 0.015 3.3E-07 57.6 3.8 63 360-444 1-65 (236)
168 COG0241 HisB Histidinol phosph 95.3 0.13 2.7E-06 50.7 9.7 130 357-500 4-144 (181)
169 TIGR01685 MDP-1 magnesium-depe 95.2 0.1 2.2E-06 50.8 8.9 132 358-501 2-153 (174)
170 PRK14502 bifunctional mannosyl 95.2 0.036 7.9E-07 64.0 6.7 67 83-169 416-482 (694)
171 PLN02940 riboflavin kinase 95.2 0.075 1.6E-06 57.4 8.7 130 388-540 95-227 (382)
172 PRK13225 phosphoglycolate phos 95.1 0.039 8.5E-07 56.9 6.2 90 114-226 145-235 (273)
173 TIGR01684 viral_ppase viral ph 95.1 0.054 1.2E-06 57.0 7.2 66 77-159 121-186 (301)
174 TIGR02471 sucr_syn_bact_C sucr 95.1 0.021 4.6E-07 56.6 3.9 63 85-169 1-65 (236)
175 PRK10187 trehalose-6-phosphate 95.0 0.043 9.3E-07 56.2 6.0 53 358-416 14-67 (266)
176 PHA03398 viral phosphatase sup 94.9 0.072 1.6E-06 56.1 7.5 76 82-173 127-204 (303)
177 TIGR01459 HAD-SF-IIA-hyp4 HAD- 94.9 0.46 1E-05 47.6 13.0 60 82-159 7-66 (242)
178 PRK09449 dUMP phosphatase; Pro 94.9 0.12 2.7E-06 50.3 8.7 91 388-501 97-192 (224)
179 PF05116 S6PP: Sucrose-6F-phos 94.9 0.019 4.2E-07 58.2 3.0 55 83-159 2-59 (247)
180 COG0241 HisB Histidinol phosph 94.9 0.19 4.2E-06 49.4 9.8 130 82-225 4-144 (181)
181 PRK10187 trehalose-6-phosphate 94.6 0.059 1.3E-06 55.3 5.9 53 83-141 14-67 (266)
182 PLN02940 riboflavin kinase 94.5 0.081 1.8E-06 57.1 6.9 92 113-226 95-190 (382)
183 PRK09449 dUMP phosphatase; Pro 94.5 0.28 6E-06 47.8 10.0 91 113-226 97-192 (224)
184 TIGR01456 CECR5 HAD-superfamil 94.3 0.09 2E-06 55.3 6.5 52 360-423 2-57 (321)
185 smart00577 CPDc catalytic doma 94.2 0.091 2E-06 48.9 5.7 123 358-503 2-140 (148)
186 smart00577 CPDc catalytic doma 94.2 0.099 2.1E-06 48.7 5.8 123 83-227 2-139 (148)
187 PLN02423 phosphomannomutase 94.0 0.12 2.5E-06 52.4 6.5 54 357-425 5-59 (245)
188 COG2503 Predicted secreted aci 94.0 0.099 2.2E-06 53.7 5.7 76 80-160 76-167 (274)
189 PF06941 NT5C: 5' nucleotidase 93.9 0.061 1.3E-06 52.0 4.0 39 387-425 74-116 (191)
190 PLN02423 phosphomannomutase 93.6 0.14 3.1E-06 51.8 6.2 43 83-137 6-49 (245)
191 COG0647 NagD Predicted sugar p 93.6 0.19 4.1E-06 52.3 7.1 69 359-441 9-77 (269)
192 TIGR01456 CECR5 HAD-superfamil 93.4 0.17 3.6E-06 53.3 6.5 52 85-148 2-57 (321)
193 TIGR01685 MDP-1 magnesium-depe 93.3 0.4 8.7E-06 46.6 8.6 130 83-226 2-153 (174)
194 PRK10748 flavin mononucleotide 93.2 0.23 5E-06 49.6 7.0 27 481-510 183-210 (238)
195 TIGR02254 YjjG/YfnB HAD superf 93.2 0.24 5.3E-06 47.7 6.9 91 113-226 99-194 (224)
196 COG0647 NagD Predicted sugar p 92.9 0.27 5.9E-06 51.1 7.1 55 84-150 9-63 (269)
197 TIGR01490 HAD-SF-IB-hyp1 HAD-s 92.9 0.43 9.4E-06 45.6 8.1 110 388-513 89-202 (202)
198 PLN02919 haloacid dehalogenase 92.9 0.29 6.3E-06 59.6 8.3 92 388-500 163-257 (1057)
199 TIGR01460 HAD-SF-IIA Haloacid 92.8 0.21 4.5E-06 50.1 5.9 40 361-412 1-40 (236)
200 PLN02919 haloacid dehalogenase 92.7 0.28 6.2E-06 59.7 8.0 92 113-225 163-257 (1057)
201 COG2503 Predicted secreted aci 92.7 0.22 4.7E-06 51.3 5.9 76 355-435 76-167 (274)
202 PRK10748 flavin mononucleotide 92.7 0.24 5.2E-06 49.5 6.2 21 206-226 183-204 (238)
203 PF06941 NT5C: 5' nucleotidase 92.5 0.15 3.2E-06 49.4 4.2 39 112-150 74-116 (191)
204 TIGR01460 HAD-SF-IIA Haloacid 92.4 0.25 5.5E-06 49.5 5.9 53 86-150 1-53 (236)
205 PRK13288 pyrophosphatase PpaX; 92.3 0.49 1.1E-05 45.9 7.7 126 388-535 84-213 (214)
206 TIGR01686 FkbH FkbH-like domai 92.2 0.84 1.8E-05 47.9 9.8 122 357-499 2-124 (320)
207 PLN02382 probable sucrose-phos 91.7 0.23 4.9E-06 54.4 5.0 55 85-150 11-65 (413)
208 COG5663 Uncharacterized conser 91.4 0.4 8.6E-06 47.0 5.7 71 127-227 87-158 (194)
209 PLN02382 probable sucrose-phos 91.3 0.27 5.8E-06 53.9 5.0 51 358-416 9-59 (413)
210 COG0546 Gph Predicted phosphat 91.3 0.6 1.3E-05 46.1 7.1 91 113-225 91-184 (220)
211 PF03031 NIF: NLI interacting 91.3 0.3 6.6E-06 45.4 4.7 65 84-149 1-73 (159)
212 PF03031 NIF: NLI interacting 91.2 0.28 6.2E-06 45.6 4.5 65 359-424 1-73 (159)
213 PF11019 DUF2608: Protein of u 91.2 1 2.3E-05 46.2 8.9 77 357-436 19-128 (252)
214 COG0546 Gph Predicted phosphat 91.0 0.9 2E-05 44.9 8.0 90 388-500 91-184 (220)
215 TIGR01449 PGP_bact 2-phosphogl 90.7 1.1 2.4E-05 43.0 8.2 94 387-501 86-181 (213)
216 PF11019 DUF2608: Protein of u 90.7 0.52 1.1E-05 48.4 6.2 76 82-160 19-127 (252)
217 PRK13222 phosphoglycolate phos 90.5 2.5 5.5E-05 40.8 10.6 95 387-501 94-189 (226)
218 COG4359 Uncharacterized conser 90.4 0.36 7.8E-06 48.0 4.5 39 111-152 73-111 (220)
219 PRK14501 putative bifunctional 89.9 0.48 1E-05 55.3 5.8 60 356-424 490-550 (726)
220 TIGR03351 PhnX-like phosphonat 89.7 1.7 3.6E-05 42.2 8.6 96 387-501 88-186 (220)
221 PLN03017 trehalose-phosphatase 89.6 0.51 1.1E-05 51.1 5.3 57 352-418 105-164 (366)
222 PRK10563 6-phosphogluconate ph 89.6 1.1 2.5E-05 43.5 7.3 20 482-501 163-182 (221)
223 COG3700 AphA Acid phosphatase 89.5 1.3 2.8E-05 43.9 7.4 125 357-505 62-211 (237)
224 COG0560 SerB Phosphoserine pho 89.4 0.81 1.8E-05 45.7 6.2 116 112-241 78-194 (212)
225 PRK13288 pyrophosphatase PpaX; 89.4 1.1 2.4E-05 43.5 7.0 92 114-226 85-178 (214)
226 TIGR01686 FkbH FkbH-like domai 89.3 2.4 5.2E-05 44.5 10.0 120 82-224 2-124 (320)
227 PRK14501 putative bifunctional 89.1 0.59 1.3E-05 54.5 5.7 52 82-139 491-543 (726)
228 PRK10826 2-deoxyglucose-6-phos 88.8 1.8 3.8E-05 42.4 8.0 97 388-507 94-192 (222)
229 COG5663 Uncharacterized conser 88.8 0.99 2.1E-05 44.3 6.0 79 402-513 87-167 (194)
230 TIGR01449 PGP_bact 2-phosphogl 88.8 1.3 2.7E-05 42.6 6.9 94 112-226 86-181 (213)
231 PLN03017 trehalose-phosphatase 88.6 0.63 1.4E-05 50.5 5.1 54 79-142 107-163 (366)
232 TIGR01511 ATPase-IB1_Cu copper 88.5 2 4.4E-05 48.8 9.4 105 357-500 384-488 (562)
233 TIGR00685 T6PP trehalose-phosp 88.4 0.91 2E-05 45.6 5.9 51 357-413 2-53 (244)
234 TIGR01525 ATPase-IB_hvy heavy 87.9 2.2 4.7E-05 48.3 9.1 103 359-499 365-468 (556)
235 TIGR01454 AHBA_synth_RP 3-amin 87.1 2.3 5E-05 41.0 7.6 94 387-501 76-171 (205)
236 PF13419 HAD_2: Haloacid dehal 87.0 1.2 2.6E-05 40.2 5.3 94 387-501 78-173 (176)
237 TIGR03351 PhnX-like phosphonat 86.8 2.8 6E-05 40.7 8.0 95 114-226 90-186 (220)
238 PRK11590 hypothetical protein; 86.5 3.1 6.7E-05 40.8 8.2 110 388-515 97-209 (211)
239 TIGR00685 T6PP trehalose-phosp 86.5 1.3 2.8E-05 44.5 5.7 50 83-138 3-53 (244)
240 PF13419 HAD_2: Haloacid dehal 85.5 1.7 3.7E-05 39.2 5.5 97 111-226 77-173 (176)
241 COG4359 Uncharacterized conser 85.4 0.89 1.9E-05 45.3 3.7 37 387-426 74-110 (220)
242 COG1778 Low specificity phosph 85.0 4.7 0.0001 39.3 8.3 112 357-501 7-122 (170)
243 PLN02151 trehalose-phosphatase 85.0 1.5 3.3E-05 47.4 5.6 53 357-416 97-149 (354)
244 TIGR01544 HAD-SF-IE haloacid d 85.0 3.9 8.4E-05 42.9 8.4 127 387-532 122-260 (277)
245 cd03016 PRX_1cys Peroxiredoxin 84.6 2.7 5.9E-05 41.4 6.8 78 362-443 10-97 (203)
246 TIGR01544 HAD-SF-IE haloacid d 84.5 3.2 7E-05 43.5 7.6 129 111-257 121-260 (277)
247 TIGR01512 ATPase-IB2_Cd heavy 84.5 6.1 0.00013 44.6 10.4 87 383-499 359-446 (536)
248 TIGR02137 HSK-PSP phosphoserin 84.5 4.8 0.0001 39.8 8.5 122 112-259 69-197 (203)
249 cd03018 PRX_AhpE_like Peroxire 84.4 5 0.00011 36.4 8.0 33 115-150 50-82 (149)
250 cd03017 PRX_BCP Peroxiredoxin 84.3 7.9 0.00017 34.6 9.2 61 87-150 8-77 (140)
251 COG3769 Predicted hydrolase (H 84.0 1.9 4.1E-05 44.2 5.4 45 82-138 6-50 (274)
252 COG3769 Predicted hydrolase (H 83.9 2.6 5.6E-05 43.2 6.3 47 357-415 6-52 (274)
253 PLN02151 trehalose-phosphatase 83.8 1.7 3.7E-05 47.0 5.4 58 77-141 92-149 (354)
254 cd03016 PRX_1cys Peroxiredoxin 83.8 4.6 0.0001 39.7 8.0 133 86-260 9-153 (203)
255 TIGR01454 AHBA_synth_RP 3-amin 83.8 3.7 8E-05 39.6 7.2 94 112-226 76-171 (205)
256 PLN03243 haloacid dehalogenase 83.3 3.8 8.2E-05 42.0 7.4 93 388-501 111-205 (260)
257 COG3700 AphA Acid phosphatase 83.3 4.8 0.0001 40.1 7.6 123 84-230 64-211 (237)
258 PRK10671 copA copper exporting 83.2 5.4 0.00012 47.5 9.7 103 359-499 631-733 (834)
259 TIGR02251 HIF-SF_euk Dullard-l 82.9 2.7 5.8E-05 40.0 5.8 62 359-421 2-76 (162)
260 TIGR02009 PGMB-YQAB-SF beta-ph 82.7 2.3 5.1E-05 39.7 5.3 93 387-500 89-181 (185)
261 TIGR02540 gpx7 putative glutat 82.3 10 0.00022 35.1 9.3 62 88-149 8-82 (153)
262 PF00702 Hydrolase: haloacid d 81.6 4.3 9.4E-05 38.5 6.7 90 383-498 124-215 (215)
263 TIGR01511 ATPase-IB1_Cu copper 81.6 6.4 0.00014 44.8 9.1 103 84-225 386-488 (562)
264 TIGR01525 ATPase-IB_hvy heavy 81.5 6.5 0.00014 44.5 9.1 103 84-224 365-468 (556)
265 TIGR02251 HIF-SF_euk Dullard-l 81.5 3.4 7.4E-05 39.3 5.9 64 84-148 2-78 (162)
266 PTZ00056 glutathione peroxidas 81.1 11 0.00023 37.2 9.4 65 86-150 23-100 (199)
267 PRK11590 hypothetical protein; 81.0 5.4 0.00012 39.1 7.3 110 113-239 97-208 (211)
268 KOG1615|consensus 80.9 4.4 9.5E-05 40.8 6.5 124 110-252 87-216 (227)
269 PF09419 PGP_phosphatase: Mito 80.6 5.9 0.00013 38.6 7.3 54 77-140 35-90 (168)
270 PRK10826 2-deoxyglucose-6-phos 80.3 4 8.6E-05 39.9 6.1 92 114-226 95-188 (222)
271 PF12689 Acid_PPase: Acid Phos 79.3 5.4 0.00012 38.8 6.6 130 357-501 2-147 (169)
272 TIGR01116 ATPase-IIA1_Ca sarco 78.9 11 0.00023 45.7 10.2 103 384-500 535-652 (917)
273 PRK10725 fructose-1-P/6-phosph 78.6 1.1 2.4E-05 42.3 1.5 16 83-98 5-20 (188)
274 PRK10725 fructose-1-P/6-phosph 78.3 1.2 2.5E-05 42.1 1.6 16 358-373 5-20 (188)
275 PLN02580 trehalose-phosphatase 78.3 3.5 7.5E-05 45.2 5.4 52 358-416 119-170 (384)
276 PLN02770 haloacid dehalogenase 78.1 8.2 0.00018 38.8 7.7 93 388-501 110-204 (248)
277 PLN02205 alpha,alpha-trehalose 78.1 3.7 8E-05 49.3 6.0 60 355-425 593-653 (854)
278 cd03017 PRX_BCP Peroxiredoxin 78.0 15 0.00033 32.7 8.7 61 362-425 8-77 (140)
279 TIGR01106 ATPase-IIC_X-K sodiu 76.5 11 0.00023 46.1 9.3 110 384-500 566-707 (997)
280 PLN02205 alpha,alpha-trehalose 76.2 4.3 9.4E-05 48.7 5.9 58 82-150 595-653 (854)
281 PF12689 Acid_PPase: Acid Phos 75.7 8.1 0.00018 37.6 6.6 130 82-226 2-147 (169)
282 PLN02770 haloacid dehalogenase 75.6 11 0.00024 37.9 7.8 92 114-226 111-204 (248)
283 PLN02412 probable glutathione 75.5 19 0.00041 34.3 9.0 51 87-137 14-72 (167)
284 TIGR01497 kdpB K+-transporting 75.1 12 0.00026 44.0 8.9 87 384-500 444-530 (675)
285 PRK10671 copA copper exporting 74.6 11 0.00024 44.8 8.8 86 109-224 648-733 (834)
286 PLN02580 trehalose-phosphatase 74.3 4.9 0.00011 44.0 5.2 53 82-141 118-170 (384)
287 cd03015 PRX_Typ2cys Peroxiredo 74.1 17 0.00036 34.5 8.3 135 361-539 9-160 (173)
288 PRK11587 putative phosphatase; 73.7 11 0.00025 36.7 7.2 92 388-501 85-178 (218)
289 cd03015 PRX_Typ2cys Peroxiredo 73.5 34 0.00073 32.4 10.2 135 85-263 8-159 (173)
290 TIGR02009 PGMB-YQAB-SF beta-ph 72.8 5.9 0.00013 37.0 4.8 93 112-225 89-181 (185)
291 TIGR01990 bPGM beta-phosphoglu 72.7 4.2 9.1E-05 38.0 3.8 93 387-500 88-180 (185)
292 COG1778 Low specificity phosph 72.1 13 0.00027 36.4 6.8 113 82-227 7-123 (170)
293 PLN03243 haloacid dehalogenase 72.1 7.7 0.00017 39.8 5.8 92 114-226 112-205 (260)
294 PRK13190 putative peroxiredoxi 72.1 11 0.00024 37.2 6.7 128 89-260 15-153 (202)
295 PF00702 Hydrolase: haloacid d 71.3 8.8 0.00019 36.3 5.7 89 109-223 125-215 (215)
296 PRK11587 putative phosphatase; 70.7 15 0.00032 35.9 7.3 92 113-226 85-178 (218)
297 TIGR01647 ATPase-IIIA_H plasma 70.3 17 0.00037 43.0 8.9 102 384-501 440-559 (755)
298 TIGR01524 ATPase-IIIB_Mg magne 70.2 17 0.00036 43.8 8.9 101 384-499 513-623 (867)
299 TIGR01522 ATPase-IIA2_Ca golgi 70.0 18 0.00038 43.6 9.0 101 384-499 526-638 (884)
300 TIGR01512 ATPase-IB2_Cd heavy 69.9 12 0.00026 42.3 7.3 87 108-224 359-446 (536)
301 PF09419 PGP_phosphatase: Mito 69.8 9 0.0002 37.4 5.4 54 352-415 35-90 (168)
302 PRK11033 zntA zinc/cadmium/mer 69.8 24 0.00052 41.7 9.9 101 359-499 549-649 (741)
303 PRK13599 putative peroxiredoxi 69.7 27 0.00059 35.0 9.0 77 88-168 14-100 (215)
304 TIGR01509 HAD-SF-IA-v3 haloaci 69.6 15 0.00033 33.9 6.8 89 387-500 86-179 (183)
305 TIGR02250 FCP1_euk FCP1-like p 69.6 12 0.00025 35.8 6.0 67 356-423 4-94 (156)
306 COG1877 OtsB Trehalose-6-phosp 69.5 8.7 0.00019 40.1 5.6 54 354-413 14-68 (266)
307 PRK13190 putative peroxiredoxi 69.4 12 0.00026 36.9 6.3 76 364-443 15-99 (202)
308 PRK09456 ?-D-glucose-1-phospha 68.9 13 0.00029 35.7 6.4 94 113-226 86-181 (199)
309 TIGR02247 HAD-1A3-hyp Epoxide 68.8 6.5 0.00014 37.9 4.3 98 387-501 95-192 (211)
310 TIGR01106 ATPase-IIC_X-K sodiu 68.0 14 0.0003 45.1 7.7 111 109-225 566-707 (997)
311 cd02964 TryX_like_family Trypa 67.9 45 0.00097 30.0 9.3 59 90-150 4-73 (132)
312 KOG1615|consensus 67.6 13 0.00029 37.5 6.1 122 387-527 89-216 (227)
313 TIGR01509 HAD-SF-IA-v3 haloaci 67.5 18 0.00039 33.5 6.8 88 113-225 87-179 (183)
314 PTZ00256 glutathione peroxidas 67.0 42 0.00092 32.3 9.4 63 87-149 25-101 (183)
315 PRK13599 putative peroxiredoxi 66.7 29 0.00063 34.8 8.5 52 388-443 48-100 (215)
316 PRK09456 ?-D-glucose-1-phospha 66.5 17 0.00038 34.9 6.7 96 388-501 86-181 (199)
317 cd02964 TryX_like_family Trypa 66.4 46 0.00099 29.9 9.0 59 365-425 4-73 (132)
318 PLN02575 haloacid dehalogenase 66.2 18 0.0004 39.6 7.4 92 388-500 218-311 (381)
319 TIGR02253 CTE7 HAD superfamily 66.2 24 0.00053 34.0 7.7 90 114-226 97-191 (221)
320 TIGR01497 kdpB K+-transporting 65.9 23 0.00049 41.7 8.5 87 109-225 444-530 (675)
321 TIGR02250 FCP1_euk FCP1-like p 65.7 15 0.00032 35.1 5.9 66 82-148 5-94 (156)
322 COG0637 Predicted phosphatase/ 65.6 3.3 7.2E-05 41.2 1.5 92 113-225 88-181 (221)
323 PRK15122 magnesium-transportin 65.3 22 0.00048 43.0 8.6 103 384-501 548-662 (903)
324 COG1877 OtsB Trehalose-6-phosp 65.2 12 0.00025 39.2 5.4 54 79-138 14-68 (266)
325 PRK00522 tpx lipid hydroperoxi 64.8 38 0.00083 32.1 8.5 37 497-533 127-163 (167)
326 PRK06698 bifunctional 5'-methy 64.6 47 0.001 36.7 10.4 90 387-500 331-422 (459)
327 cd03018 PRX_AhpE_like Peroxire 64.6 47 0.001 29.9 8.8 34 389-425 49-82 (149)
328 TIGR01691 enolase-ppase 2,3-di 64.5 12 0.00026 37.7 5.3 97 387-501 96-192 (220)
329 TIGR01691 enolase-ppase 2,3-di 64.4 10 0.00022 38.2 4.7 97 112-226 96-192 (220)
330 TIGR01993 Pyr-5-nucltdase pyri 64.3 3.8 8.3E-05 38.7 1.7 14 85-98 2-15 (184)
331 TIGR01993 Pyr-5-nucltdase pyri 63.8 4 8.8E-05 38.6 1.7 14 360-373 2-15 (184)
332 COG0637 Predicted phosphatase/ 63.4 3.9 8.4E-05 40.7 1.5 96 387-509 87-187 (221)
333 PLN02575 haloacid dehalogenase 63.2 25 0.00053 38.6 7.7 91 114-225 219-311 (381)
334 TIGR02254 YjjG/YfnB HAD superf 62.2 25 0.00055 33.7 6.9 93 388-501 99-194 (224)
335 cd02969 PRX_like1 Peroxiredoxi 62.0 44 0.00095 31.4 8.4 48 114-167 45-97 (171)
336 PF02358 Trehalose_PPase: Treh 61.7 8.7 0.00019 38.3 3.7 48 362-415 1-49 (235)
337 PLN02177 glycerol-3-phosphate 61.7 4.5 9.8E-05 45.7 1.8 40 461-509 176-215 (497)
338 PRK10563 6-phosphogluconate ph 61.6 4.4 9.5E-05 39.4 1.5 18 82-99 3-20 (221)
339 TIGR01493 HAD-SF-IA-v2 Haloaci 61.3 3.8 8.2E-05 38.2 1.0 15 85-99 1-15 (175)
340 PLN02177 glycerol-3-phosphate 61.2 4.6 0.0001 45.6 1.8 16 83-98 22-37 (497)
341 KOG0207|consensus 60.9 33 0.00073 41.4 8.7 103 85-226 705-810 (951)
342 PF06888 Put_Phosphatase: Puta 60.2 18 0.0004 37.0 5.8 15 85-99 2-16 (234)
343 PF06888 Put_Phosphatase: Puta 60.1 19 0.00041 36.9 5.8 47 388-442 73-123 (234)
344 PRK01122 potassium-transportin 60.1 36 0.00079 40.1 8.8 88 384-501 443-532 (679)
345 TIGR01524 ATPase-IIIB_Mg magne 59.5 34 0.00074 41.2 8.7 103 109-224 513-623 (867)
346 TIGR01523 ATPase-IID_K-Na pota 58.9 41 0.00089 41.5 9.4 103 384-500 644-769 (1053)
347 TIGR01493 HAD-SF-IA-v2 Haloaci 58.8 4.3 9.4E-05 37.8 0.9 14 360-373 1-14 (175)
348 COG4996 Predicted phosphatase 58.7 29 0.00062 33.2 6.2 20 84-103 1-20 (164)
349 KOG0207|consensus 58.5 42 0.00092 40.6 8.9 135 314-500 672-809 (951)
350 cd03012 TlpA_like_DipZ_like Tl 58.4 23 0.0005 31.5 5.5 37 114-150 43-82 (126)
351 PF02358 Trehalose_PPase: Treh 58.0 11 0.00024 37.5 3.7 48 87-140 1-49 (235)
352 TIGR02253 CTE7 HAD superfamily 56.7 39 0.00084 32.6 7.2 93 388-501 96-191 (221)
353 TIGR01522 ATPase-IIA2_Ca golgi 56.6 39 0.00085 40.8 8.6 101 109-224 526-638 (884)
354 PF08924 DUF1906: Domain of un 56.6 6.3 0.00014 36.9 1.6 41 393-433 8-54 (136)
355 PRK01122 potassium-transportin 56.3 49 0.0011 39.0 9.0 87 109-226 443-532 (679)
356 TIGR01647 ATPase-IIIA_H plasma 55.7 42 0.00092 39.8 8.5 104 109-226 440-559 (755)
357 PRK15122 magnesium-transportin 55.6 39 0.00086 40.9 8.4 105 109-226 548-662 (903)
358 TIGR01517 ATPase-IIB_Ca plasma 55.6 55 0.0012 39.8 9.6 103 384-501 577-693 (941)
359 cd03012 TlpA_like_DipZ_like Tl 55.6 27 0.00058 31.1 5.5 38 388-425 42-82 (126)
360 PTZ00256 glutathione peroxidas 55.0 71 0.0015 30.7 8.6 62 363-424 26-101 (183)
361 TIGR01990 bPGM beta-phosphoglu 54.6 20 0.00044 33.4 4.7 89 113-225 89-180 (185)
362 PRK09437 bcp thioredoxin-depen 54.4 79 0.0017 29.0 8.5 33 115-150 52-84 (154)
363 PRK10517 magnesium-transportin 54.4 52 0.0011 40.0 9.1 103 384-501 548-662 (902)
364 PRK13189 peroxiredoxin; Provis 54.3 54 0.0012 33.0 7.9 104 389-535 56-162 (222)
365 PRK14010 potassium-transportin 53.9 51 0.0011 38.8 8.7 88 384-501 439-528 (673)
366 TIGR00385 dsbE periplasmic pro 53.7 75 0.0016 30.1 8.5 34 222-259 136-169 (173)
367 TIGR01116 ATPase-IIA1_Ca sarco 53.4 42 0.00091 40.7 8.1 108 109-225 535-652 (917)
368 TIGR03137 AhpC peroxiredoxin. 53.0 58 0.0013 31.5 7.7 55 93-150 23-85 (187)
369 TIGR02247 HAD-1A3-hyp Epoxide 52.9 19 0.00042 34.6 4.4 96 112-226 95-192 (211)
370 PRK00522 tpx lipid hydroperoxi 52.1 1E+02 0.0023 29.1 9.2 70 86-165 28-106 (167)
371 PRK10382 alkyl hydroperoxide r 52.1 47 0.001 32.6 6.9 33 390-425 53-85 (187)
372 PRK10382 alkyl hydroperoxide r 51.7 66 0.0014 31.6 7.9 54 94-150 24-85 (187)
373 PF10307 DUF2410: Hypothetical 51.2 80 0.0017 31.8 8.4 98 109-222 52-152 (197)
374 PTZ00253 tryparedoxin peroxida 51.2 65 0.0014 31.5 7.8 46 93-138 28-81 (199)
375 PHA02597 30.2 hypothetical pro 50.9 31 0.00067 32.9 5.4 94 387-501 75-170 (197)
376 cd02071 MM_CoA_mut_B12_BD meth 49.5 1.1E+02 0.0023 27.6 8.4 98 107-225 7-104 (122)
377 PF08924 DUF1906: Domain of un 49.3 8.8 0.00019 35.9 1.3 41 118-158 8-54 (136)
378 cd03014 PRX_Atyp2cys Peroxired 49.2 59 0.0013 29.3 6.7 60 86-150 10-78 (143)
379 PF00578 AhpC-TSA: AhpC/TSA fa 49.1 34 0.00074 29.6 5.0 74 86-168 9-91 (124)
380 PLN02811 hydrolase 49.1 56 0.0012 32.0 7.0 98 387-501 79-180 (220)
381 cd03014 PRX_Atyp2cys Peroxired 48.9 91 0.002 28.1 7.9 32 389-425 47-78 (143)
382 PRK15412 thiol:disulfide inter 48.0 1E+02 0.0022 29.6 8.5 41 108-150 76-118 (185)
383 PRK06698 bifunctional 5'-methy 47.6 61 0.0013 35.8 7.8 89 114-226 333-423 (459)
384 PLN03063 alpha,alpha-trehalose 47.4 31 0.00068 41.2 5.8 60 356-424 505-568 (797)
385 PLN03063 alpha,alpha-trehalose 47.4 30 0.00065 41.4 5.6 59 82-149 506-568 (797)
386 PLN02399 phospholipid hydroper 47.2 88 0.0019 32.1 8.2 64 85-148 82-158 (236)
387 TIGR02245 HAD_IIID1 HAD-superf 47.0 49 0.0011 33.0 6.2 57 355-416 18-74 (195)
388 TIGR02245 HAD_IIID1 HAD-superf 47.0 51 0.0011 32.9 6.3 58 80-142 18-75 (195)
389 PRK10517 magnesium-transportin 46.5 73 0.0016 38.8 8.7 105 109-226 548-662 (902)
390 TIGR01652 ATPase-Plipid phosph 45.9 60 0.0013 40.0 8.0 29 109-137 629-657 (1057)
391 TIGR01523 ATPase-IID_K-Na pota 45.5 85 0.0018 38.9 9.1 103 109-225 644-769 (1053)
392 TIGR00385 dsbE periplasmic pro 44.8 1.1E+02 0.0023 29.1 8.0 40 384-425 72-113 (173)
393 PLN02811 hydrolase 44.5 53 0.0012 32.1 6.1 98 112-226 79-180 (220)
394 TIGR03137 AhpC peroxiredoxin. 44.5 68 0.0015 31.1 6.7 54 369-425 24-85 (187)
395 KOG2882|consensus 44.3 41 0.00089 35.9 5.4 59 359-432 23-81 (306)
396 COG1225 Bcp Peroxiredoxin [Pos 43.6 62 0.0013 31.4 6.1 63 89-159 17-88 (157)
397 PRK14010 potassium-transportin 43.5 84 0.0018 37.1 8.3 87 109-226 439-528 (673)
398 PF05152 DUF705: Protein of un 43.4 75 0.0016 33.8 7.1 56 84-150 123-178 (297)
399 PLN03064 alpha,alpha-trehalose 43.2 40 0.00086 41.2 5.8 64 356-424 589-658 (934)
400 TIGR01517 ATPase-IIB_Ca plasma 42.6 92 0.002 38.0 8.7 104 109-226 577-693 (941)
401 PHA02597 30.2 hypothetical pro 42.6 47 0.001 31.6 5.3 93 113-226 76-170 (197)
402 COG2179 Predicted hydrolase of 42.1 87 0.0019 31.0 6.9 105 356-499 26-132 (175)
403 PRK13191 putative peroxiredoxi 41.6 1.5E+02 0.0033 29.6 8.9 129 89-260 20-160 (215)
404 COG1011 Predicted hydrolase (H 40.3 17 0.00036 35.1 1.7 18 357-374 3-20 (229)
405 COG1011 Predicted hydrolase (H 39.9 16 0.00035 35.2 1.6 18 82-99 3-20 (229)
406 PRK03147 thiol-disulfide oxido 39.3 2.1E+02 0.0045 26.4 8.9 35 114-150 81-115 (173)
407 cd02968 SCO SCO (an acronym fo 39.2 86 0.0019 27.9 6.1 76 85-167 5-94 (142)
408 COG2179 Predicted hydrolase of 39.1 1.1E+02 0.0023 30.4 6.9 104 82-224 27-132 (175)
409 PLN02499 glycerol-3-phosphate 39.0 16 0.00035 41.3 1.6 83 395-492 102-186 (498)
410 PF05152 DUF705: Protein of un 38.7 61 0.0013 34.5 5.6 58 358-426 122-179 (297)
411 TIGR01652 ATPase-Plipid phosph 38.6 1.1E+02 0.0024 37.7 8.7 28 384-411 629-656 (1057)
412 PLN02499 glycerol-3-phosphate 38.5 17 0.00036 41.2 1.6 15 84-98 9-24 (498)
413 PLN03064 alpha,alpha-trehalose 38.4 56 0.0012 40.0 6.0 64 82-150 590-659 (934)
414 TIGR01494 ATPase_P-type ATPase 38.0 1.4E+02 0.0031 33.2 8.8 83 384-499 345-427 (499)
415 KOG2134|consensus 37.6 36 0.00077 37.6 3.8 79 354-434 71-156 (422)
416 PF08534 Redoxin: Redoxin; In 37.6 2E+02 0.0043 25.9 8.3 59 89-150 15-82 (146)
417 COG4087 Soluble P-type ATPase 37.5 1.1E+02 0.0024 29.3 6.6 126 88-260 19-146 (152)
418 cd02970 PRX_like2 Peroxiredoxi 37.4 2.2E+02 0.0048 25.3 8.5 48 115-171 45-92 (149)
419 PRK13189 peroxiredoxin; Provis 37.1 1.7E+02 0.0036 29.5 8.3 129 89-260 22-162 (222)
420 PRK10606 btuE putative glutath 36.9 2.8E+02 0.006 27.3 9.6 128 87-261 10-181 (183)
421 COG4087 Soluble P-type ATPase 36.8 1.3E+02 0.0028 29.0 6.8 126 363-535 19-146 (152)
422 COG2217 ZntA Cation transport 36.7 1.1E+02 0.0023 36.5 7.8 106 360-503 519-626 (713)
423 PF10307 DUF2410: Hypothetical 36.1 1.8E+02 0.004 29.3 8.3 98 384-497 52-152 (197)
424 TIGR01548 HAD-SF-IA-hyp1 haloa 36.1 1.1E+02 0.0024 29.3 6.6 33 115-150 110-142 (197)
425 cd02970 PRX_like2 Peroxiredoxi 35.9 1.9E+02 0.0041 25.7 7.8 48 390-446 45-92 (149)
426 PRK11033 zntA zinc/cadmium/mer 35.5 95 0.0021 36.8 7.2 84 109-224 566-649 (741)
427 cd06418 GH25_BacA-like BacA is 35.4 28 0.00062 35.0 2.5 40 393-432 24-67 (212)
428 KOG3189|consensus 35.4 39 0.00084 34.5 3.4 13 360-372 13-25 (252)
429 PF08659 KR: KR domain; Inter 35.1 1.6E+02 0.0035 28.0 7.6 99 382-486 31-136 (181)
430 TIGR01657 P-ATPase-V P-type AT 34.6 1.4E+02 0.003 37.0 8.6 36 384-419 654-689 (1054)
431 TIGR01548 HAD-SF-IA-hyp1 haloa 33.8 86 0.0019 30.0 5.5 88 388-496 108-196 (197)
432 TIGR02540 gpx7 putative glutat 33.4 48 0.001 30.6 3.6 70 363-434 8-90 (153)
433 PTZ00056 glutathione peroxidas 33.3 58 0.0013 32.1 4.3 64 362-425 24-100 (199)
434 COG1609 PurR Transcriptional r 32.5 2.9E+02 0.0063 29.2 9.7 52 381-433 154-208 (333)
435 KOG2134|consensus 31.8 49 0.0011 36.6 3.7 56 79-135 71-128 (422)
436 KOG2882|consensus 31.4 85 0.0019 33.6 5.3 59 84-157 23-81 (306)
437 COG1225 Bcp Peroxiredoxin [Pos 31.3 1.1E+02 0.0023 29.8 5.5 63 364-434 17-88 (157)
438 COG1654 BirA Biotin operon rep 30.3 46 0.00099 28.7 2.6 39 112-168 32-70 (79)
439 PF08659 KR: KR domain; Inter 30.1 2.3E+02 0.005 27.0 7.7 99 107-211 31-136 (181)
440 TIGR02468 sucrsPsyn_pln sucros 30.0 75 0.0016 39.4 5.3 56 355-434 767-828 (1050)
441 KOG2914|consensus 29.9 2.5E+02 0.0055 28.6 8.3 99 387-501 93-192 (222)
442 cd00340 GSH_Peroxidase Glutath 29.8 3.5E+02 0.0076 24.9 8.7 63 88-150 8-82 (152)
443 COG0474 MgtA Cation transport 29.5 1.8E+02 0.0038 35.6 8.3 140 109-262 545-710 (917)
444 PF00578 AhpC-TSA: AhpC/TSA fa 29.4 1.3E+02 0.0028 26.0 5.5 72 362-442 10-90 (124)
445 PTZ00445 p36-lilke protein; Pr 29.4 63 0.0014 33.1 3.8 60 78-137 38-101 (219)
446 PF13778 DUF4174: Domain of un 29.0 3.1E+02 0.0068 24.9 8.0 42 492-535 68-111 (118)
447 PRK13191 putative peroxiredoxi 28.9 1.8E+02 0.0038 29.2 7.0 105 388-535 53-160 (215)
448 PF15577 Spc7_C2: Spc7_C2 28.3 1.1E+02 0.0025 25.3 4.6 48 41-94 16-65 (67)
449 TIGR01494 ATPase_P-type ATPase 28.1 2.5E+02 0.0055 31.3 8.7 83 109-224 345-427 (499)
450 KOG3189|consensus 28.0 60 0.0013 33.2 3.3 39 85-135 13-51 (252)
451 COG2217 ZntA Cation transport 27.9 2.1E+02 0.0046 34.1 8.4 105 85-227 519-625 (713)
452 TIGR02468 sucrsPsyn_pln sucros 26.8 82 0.0018 39.0 4.8 56 80-159 767-828 (1050)
453 TIGR00640 acid_CoA_mut_C methy 26.7 3.9E+02 0.0084 24.8 8.3 107 104-233 7-113 (132)
454 PF10340 DUF2424: Protein of u 26.6 3.6E+02 0.0077 29.8 9.2 147 361-514 156-315 (374)
455 cd02966 TlpA_like_family TlpA- 26.6 62 0.0014 26.6 2.8 37 203-241 77-113 (116)
456 cd02971 PRX_family Peroxiredox 25.6 2E+02 0.0044 25.4 6.1 75 86-168 6-89 (140)
457 cd02969 PRX_like1 Peroxiredoxi 25.5 1.5E+02 0.0032 27.8 5.4 48 389-442 45-97 (171)
458 TIGR02321 Pphn_pyruv_hyd phosp 25.3 1.2E+02 0.0026 32.1 5.2 78 388-500 19-105 (290)
459 TIGR01657 P-ATPase-V P-type AT 25.3 2.2E+02 0.0048 35.3 8.2 36 109-144 654-689 (1054)
460 PF13701 DDE_Tnp_1_4: Transpos 25.2 52 0.0011 36.7 2.7 80 354-447 135-229 (448)
461 cd06418 GH25_BacA-like BacA is 25.0 1.1E+02 0.0024 30.8 4.7 40 118-157 24-67 (212)
462 cd03009 TryX_like_TryX_NRX Try 24.4 1.1E+02 0.0025 27.0 4.3 61 88-150 4-74 (131)
463 PTZ00445 p36-lilke protein; Pr 23.7 92 0.002 31.9 3.8 59 353-411 38-100 (219)
464 PRK15000 peroxidase; Provision 23.5 2.8E+02 0.0062 27.3 7.2 102 389-534 55-160 (200)
465 COG0386 BtuE Glutathione perox 22.7 72 0.0016 31.2 2.7 48 86-133 9-63 (162)
466 cd02966 TlpA_like_family TlpA- 22.7 68 0.0015 26.3 2.3 36 479-516 78-113 (116)
467 PTZ00137 2-Cys peroxiredoxin; 22.5 3.9E+02 0.0084 27.9 8.2 101 390-535 120-224 (261)
468 PTZ00253 tryparedoxin peroxida 22.2 2.3E+02 0.005 27.6 6.3 24 390-413 58-81 (199)
469 COG0474 MgtA Cation transport 21.8 4.1E+02 0.0088 32.6 9.4 113 384-510 545-683 (917)
470 PRK09437 bcp thioredoxin-depen 21.7 2.9E+02 0.0063 25.2 6.5 34 389-425 51-84 (154)
471 cd04375 RhoGAP_DLC1 RhoGAP_DLC 21.7 2E+02 0.0044 28.9 5.9 74 116-200 51-124 (220)
472 COG0263 ProB Glutamate 5-kinas 21.3 2.7E+02 0.0058 30.7 6.9 54 390-445 32-110 (369)
473 PRK00955 hypothetical protein; 21.2 5.5E+02 0.012 30.3 9.8 65 111-178 384-452 (620)
474 PF02142 MGS: MGS-like domain 21.1 1.5E+02 0.0031 25.6 4.1 32 390-434 1-32 (95)
475 PF02590 SPOUT_MTase: Predicte 20.6 2.2E+02 0.0048 27.4 5.6 52 354-421 64-116 (155)
476 PTZ00137 2-Cys peroxiredoxin; 20.5 4.1E+02 0.0088 27.8 7.9 122 94-260 90-224 (261)
477 PF10340 DUF2424: Protein of u 20.4 5.1E+02 0.011 28.6 8.9 146 86-238 156-314 (374)
No 1
>KOG2116|consensus
Probab=100.00 E-value=3.7e-100 Score=824.19 Aligned_cols=258 Identities=56% Similarity=1.009 Sum_probs=252.2
Q ss_pred CCCccceeeccCCHHHHHhCcCCCCCceeEEEEEeccCCcceeeeEEEEecCCCcEEEEecCCccccCCccccccccccc
Q psy12533 30 GLNANHKKTLRLTSEQIAGLELRSGMNEVEFSVTTAYQGTTRCKCYLFKWRWNDKIVISDIDGTITKSDVLGHVLPIMGK 109 (567)
Q Consensus 30 ~~~~~~~k~lrlts~qL~~l~Lk~G~N~v~f~v~t~~qG~~~~~~~iylw~~~~kiVISDIDGTITkSD~lG~il~~lGk 109 (567)
...+.|.||||||||||++||||+|.|.|+|+|+|+|||+|+|+|+||||+|++|||||||||||||||++||+||+|||
T Consensus 477 ~~~~qy~rtLrltSEQL~sLnLk~G~N~v~FsisT~~~Gt~~c~~~IYlWkWn~kIVISDIDGTITKSDvLGh~lp~iGk 556 (738)
T KOG2116|consen 477 NPRPQYVRTLRLTSEQLKSLNLKDGKNDVVFSISTQYQGTAQCEGNIYLWKWNDKIVISDIDGTITKSDVLGHVLPMIGK 556 (738)
T ss_pred CcchhhhhhcccCHHHHhhcCCccCCceeEEEEEecccceEEEeeEEEEEecCCcEEEecCCCceEhhhhhhhhhhhhcC
Confidence 36788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhccChhHHHHH
Q psy12533 110 DWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKIS 189 (567)
Q Consensus 110 Dwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GPlllsp~~l~~al~REvi~k~p~~fKi~ 189 (567)
||||.|||+||++|++|||||||||||||+||++||.||+||+|+|+.||+|||+||||+||+|||||||.|+||+|||+
T Consensus 557 DWTh~GVAkLyt~Ik~NGYk~lyLSARaIgQA~~TR~yL~nv~QdG~~LPdGPViLSPd~lf~Al~REVI~RkPe~FKIA 636 (738)
T KOG2116|consen 557 DWTHTGVAKLYTKIKENGYKILYLSARAIGQADSTRQYLKNVEQDGKKLPDGPVILSPDSLFAALHREVIERKPEVFKIA 636 (738)
T ss_pred cchhhhHHHHHHHHHhCCeeEEEEehhhhhhhHHHHHHHHHHhhcCccCCCCCEEeCCCcchHHHHHHHHHcCchhhhHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhCCCCCCCEEEecCCcccchhhhhhcCCCCCCEEEEcCCCceeccccccccccHHhHHhhhhhcCCCCCCCC-
Q psy12533 190 CLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLSRIFTINSRGEVKHEMTQTFQSTYSNMSYLVDQMFPSSLEGT- 268 (567)
Q Consensus 190 ~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~~rIF~In~~g~~~~~~~~~~~~sY~~l~~~vd~~fP~~~~~~- 268 (567)
||++|++|||+.+||||||||||+||+.+|++||||.+|||||||+|||++++.+++++||.+|+++|||||||+...+
T Consensus 637 cL~DIk~LF~p~~nPFYAgFGNR~TDviSY~~VgVP~~RIFtINpkGEv~~e~~~~~~~SY~~l~elVd~mFPplS~~~~ 716 (738)
T KOG2116|consen 637 CLTDIKNLFPPSGNPFYAGFGNRITDVISYRQVGVPLSRIFTINPKGEVIQELLKTLKSSYVRLNELVDHMFPPLSRSTS 716 (738)
T ss_pred HHHHHHHhcCCCCCceeeecCCCcccceeeeeecCCccceEEECCCceehHHHHhhhhhhhhhHHHHHHHhCCCcccccc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999865
Q ss_pred ---CCCcccccccccCcCCCcc
Q psy12533 269 ---SSEDFTTMAEILNQIPEIT 287 (567)
Q Consensus 269 ---~~~~~~~~~~w~~~~~~~~ 287 (567)
.+++|++|||||+|+|+++
T Consensus 717 ~~~~~~~fs~fnfWr~p~~~v~ 738 (738)
T KOG2116|consen 717 DDFPNPEFSNFNFWREPLPEVD 738 (738)
T ss_pred ccCCccccCCceeecCCCccCC
Confidence 3479999999999999874
No 2
>KOG2116|consensus
Probab=100.00 E-value=2.1e-97 Score=802.83 Aligned_cols=262 Identities=57% Similarity=1.032 Sum_probs=253.8
Q ss_pred hhhcCCCcceeEEEecCHHHHhcCcCCCCCceeEEEEEecccCeeeeeeeEEeeeCCCeEEEEecCCccccCCccccccc
Q psy12533 301 RNKRGLNANHKKTLRLTSEQIAGLELRSGMNEVEFSVTTAYQGTTRCKCYLFKWRWNDKIVISDIDGTITKSDVLGHVLP 380 (567)
Q Consensus 301 ~~~~~~~~~~~~sl~ltseqL~~l~L~~G~n~V~f~v~s~~~g~~~~~~~iylw~~~~kiVIsDIDGTiTkSD~~G~~~~ 380 (567)
.+.....+.|.+|||||||||++||||.|.|.|+|+++|+|||+|.|+|+||||+|++|||||||||||||||++||+||
T Consensus 473 ~sse~~~~qy~rtLrltSEQL~sLnLk~G~N~v~FsisT~~~Gt~~c~~~IYlWkWn~kIVISDIDGTITKSDvLGh~lp 552 (738)
T KOG2116|consen 473 SSSENPRPQYVRTLRLTSEQLKSLNLKDGKNDVVFSISTQYQGTAQCEGNIYLWKWNDKIVISDIDGTITKSDVLGHVLP 552 (738)
T ss_pred CCCCCcchhhhhhcccCHHHHhhcCCccCCceeEEEEEecccceEEEeeEEEEEecCCcEEEecCCCceEhhhhhhhhhh
Confidence 44444667899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCcCCcchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhccChhH
Q psy12533 381 IMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQE 460 (567)
Q Consensus 381 ~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GPvl~spd~l~~al~rEvi~k~p~~ 460 (567)
+|||||||.|||+||++|++|||||||||||+|+||++||.||+||+|+|+.||+|||++|||++|+|||||||.|+||+
T Consensus 553 ~iGkDWTh~GVAkLyt~Ik~NGYk~lyLSARaIgQA~~TR~yL~nv~QdG~~LPdGPViLSPd~lf~Al~REVI~RkPe~ 632 (738)
T KOG2116|consen 553 MIGKDWTHTGVAKLYTKIKENGYKILYLSARAIGQADSTRQYLKNVEQDGKKLPDGPVILSPDSLFAALHREVIERKPEV 632 (738)
T ss_pred hhcCcchhhhHHHHHHHHHhCCeeEEEEehhhhhhhHHHHHHHHHHhhcCccCCCCCEEeCCCcchHHHHHHHHHcCchh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCCCCCEEEEcCCCcccccccccccccHhhHHhhhhhcCCCCC
Q psy12533 461 FKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLSRIFTINSRGEVKHEMTQTFQSTYSNMSYLVDQMFPSSL 540 (567)
Q Consensus 461 fK~~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~~rIF~In~~g~~~~~~~~~~~~sY~~l~~~vd~~FP~~~ 540 (567)
|||+||++|++|||+.+||||||||||+||+.+|++||||.+|||||||+|||++++.+++++||.+|+|+|||||||+.
T Consensus 633 FKIAcL~DIk~LF~p~~nPFYAgFGNR~TDviSY~~VgVP~~RIFtINpkGEv~~e~~~~~~~SY~~l~elVd~mFPplS 712 (738)
T KOG2116|consen 633 FKIACLTDIKNLFPPSGNPFYAGFGNRITDVISYRQVGVPLSRIFTINPKGEVIQELLKTLKSSYVRLNELVDHMFPPLS 712 (738)
T ss_pred hhHHHHHHHHHhcCCCCCceeeecCCCcccceeeeeecCCccceEEECCCceehHHHHhhhhhhhhhHHHHHHHhCCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCC----CCCCCCCceecCCCCCCCC
Q psy12533 541 EGT----SSEDFSQFVYWREPICETL 562 (567)
Q Consensus 541 ~~~----~~~~~~~~~~w~~p~~~~~ 562 (567)
... .+++|++|||||.|+|+++
T Consensus 713 ~~~~~~~~~~~fs~fnfWr~p~~~v~ 738 (738)
T KOG2116|consen 713 RSTSDDFPNPEFSNFNFWREPLPEVD 738 (738)
T ss_pred ccccccCCccccCCceeecCCCccCC
Confidence 854 3479999999999999874
No 3
>COG5083 SMP2 Uncharacterized protein involved in plasmid maintenance [General function prediction only]
Probab=100.00 E-value=2.5e-72 Score=586.14 Aligned_cols=233 Identities=48% Similarity=0.847 Sum_probs=225.8
Q ss_pred CccceeeccCCHHHHHhCcCCCCCceeEEEEEeccCCcceeeeEEEEecCCCcEEEEecCCccccCCccccccccccccc
Q psy12533 32 NANHKKTLRLTSEQIAGLELRSGMNEVEFSVTTAYQGTTRCKCYLFKWRWNDKIVISDIDGTITKSDVLGHVLPIMGKDW 111 (567)
Q Consensus 32 ~~~~~k~lrlts~qL~~l~Lk~G~N~v~f~v~t~~qG~~~~~~~iylw~~~~kiVISDIDGTITkSD~lG~il~~lGkDw 111 (567)
-+.|.++|||+++||.+||||+|.|.+.|.|.. |.+.|+++||||.|+.|+|||||||||||||++||+..++||||
T Consensus 327 ~~d~~~tiklnsdqLr~LnLkyGkn~lkf~V~g---~~a~~t~~ifvwr~n~kiVVsDiDGTITkSD~~Ghv~~miGkdw 403 (580)
T COG5083 327 VTDYNGTIKLNSDQLRNLNLKYGKNLLKFYVEG---GKAIATMYIFVWRNNKKIVVSDIDGTITKSDALGHVKQMIGKDW 403 (580)
T ss_pred eecccceEEcCChHHhcccCccCcceEEEEEcC---CccEEEEEEEEEeCCCcEEEEecCCcEEehhhHHHHHHHhccch
Confidence 467899999999999999999999999999983 66799999999999999999999999999999999999999999
Q ss_pred cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhccChhHHHHHHH
Q psy12533 112 AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCL 191 (567)
Q Consensus 112 th~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GPlllsp~~l~~al~REvi~k~p~~fKi~~L 191 (567)
||.|||+||.+|.+|||+|+|||||+.||++.||.||+.+.|+|+.||+|||+|+||+.++|++||+|.++||+||++||
T Consensus 404 th~gVAkLYtdI~rNGYkI~YltsR~~Gqa~sTrsylrnieQngykLpdgpviLspd~t~aal~relIlrkpE~FKiayL 483 (580)
T COG5083 404 THNGVAKLYTDIDRNGYKIKYLTSRSYGQADSTRSYLRNIEQNGYKLPDGPVILSPDRTMAALYRELILRKPEVFKIAYL 483 (580)
T ss_pred hhcchhhhhhhhccCceEEEEEecccccchhhhhhHHHhhhhcCccCCCCCEeeccchhhhhhhhhhhhcChHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCCCCCCEEEecCCcccchhhhhhcCCCCCCEEEEcCCCceecccccc-ccccHHhHHhhhhhcCCCCCCCC
Q psy12533 192 RDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLSRIFTINSRGEVKHEMTQT-FQSTYSNMSYLVDQMFPSSLEGT 268 (567)
Q Consensus 192 ~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~~rIF~In~~g~~~~~~~~~-~~~sY~~l~~~vd~~fP~~~~~~ 268 (567)
++|+++|.. ..|||||||||.|||.+|+.||||++||||||.+|||+.|+.+. ++++|.+|+++||||||||...+
T Consensus 484 ndl~slf~e-~~PFyAGFGNriTDvisY~~vgIp~SrIFTIn~~gev~~ell~~sy~~sy~~mne~VDhfFPp~s~~t 560 (580)
T COG5083 484 NDLKSLFIE-FDPFYAGFGNRITDVISYSNVGIPKSRIFTINKNGEVHGELLIVSYRSSYKQMNELVDHFFPPLSPKT 560 (580)
T ss_pred HHHHHhhCc-CChhhccccccchhheeeccccCChhheEEeccCCcEEEEEEEeehhhHHHHHhhhhhhcCCCCCCcc
Confidence 999999987 67999999999999999999999999999999999999999987 89999999999999999998654
No 4
>COG5083 SMP2 Uncharacterized protein involved in plasmid maintenance [General function prediction only]
Probab=100.00 E-value=1.9e-71 Score=579.56 Aligned_cols=245 Identities=47% Similarity=0.842 Sum_probs=232.0
Q ss_pred CCcceeEEEecCHHHHhcCcCCCCCceeEEEEEecccCeeeeeeeEEeeeCCCeEEEEecCCccccCCcccccccccCcC
Q psy12533 306 LNANHKKTLRLTSEQIAGLELRSGMNEVEFSVTTAYQGTTRCKCYLFKWRWNDKIVISDIDGTITKSDVLGHVLPIMGKD 385 (567)
Q Consensus 306 ~~~~~~~sl~ltseqL~~l~L~~G~n~V~f~v~s~~~g~~~~~~~iylw~~~~kiVIsDIDGTiTkSD~~G~~~~~~GkD 385 (567)
..+.|.++++|+++||..|||++|.|.+.|.|. +|.+.|+++||||.++.|+|||||||||||||++||+..++|||
T Consensus 326 ~~~d~~~tiklnsdqLr~LnLkyGkn~lkf~V~---g~~a~~t~~ifvwr~n~kiVVsDiDGTITkSD~~Ghv~~miGkd 402 (580)
T COG5083 326 AVTDYNGTIKLNSDQLRNLNLKYGKNLLKFYVE---GGKAIATMYIFVWRNNKKIVVSDIDGTITKSDALGHVKQMIGKD 402 (580)
T ss_pred eeecccceEEcCChHHhcccCccCcceEEEEEc---CCccEEEEEEEEEeCCCcEEEEecCCcEEehhhHHHHHHHhccc
Confidence 345789999999999999999999999999998 56779999999999999999999999999999999999999999
Q ss_pred CcchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhccChhHHHHHH
Q psy12533 386 WAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISC 465 (567)
Q Consensus 386 w~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GPvl~spd~l~~al~rEvi~k~p~~fK~~~ 465 (567)
|+|.|||+||.+|..|||+|+|||||+.||+..||.||+.+.|+|+.||+|||+++||+.++|++||+|.++||.|||+|
T Consensus 403 wth~gVAkLYtdI~rNGYkI~YltsR~~Gqa~sTrsylrnieQngykLpdgpviLspd~t~aal~relIlrkpE~FKiay 482 (580)
T COG5083 403 WTHNGVAKLYTDIDRNGYKIKYLTSRSYGQADSTRSYLRNIEQNGYKLPDGPVILSPDRTMAALYRELILRKPEVFKIAY 482 (580)
T ss_pred hhhcchhhhhhhhccCceEEEEEecccccchhhhhhHHHhhhhcCccCCCCCEeeccchhhhhhhhhhhhcChHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCCCCCEEEEcCCCccccccccc-ccccHhhHHhhhhhcCCCCCCCC-
Q psy12533 466 LRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLSRIFTINSRGEVKHEMTQT-FQSTYSNMSYLVDQMFPSSLEGT- 543 (567)
Q Consensus 466 L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~~rIF~In~~g~~~~~~~~~-~~~sY~~l~~~vd~~FP~~~~~~- 543 (567)
|++|+.+|.. .+|||||||||.|||.+|+.||||++|||+||++||++.|+.+. +.++|.+|+|+||||||||....
T Consensus 483 Lndl~slf~e-~~PFyAGFGNriTDvisY~~vgIp~SrIFTIn~~gev~~ell~~sy~~sy~~mne~VDhfFPp~s~~t~ 561 (580)
T COG5083 483 LNDLKSLFIE-FDPFYAGFGNRITDVISYSNVGIPKSRIFTINKNGEVHGELLIVSYRSSYKQMNELVDHFFPPLSPKTI 561 (580)
T ss_pred HHHHHHhhCc-CChhhccccccchhheeeccccCChhheEEeccCCcEEEEEEEeehhhHHHHHhhhhhhcCCCCCCccc
Confidence 9999999986 67999999999999999999999999999999999999999987 89999999999999999999743
Q ss_pred --CCCCCCCceecCC
Q psy12533 544 --SSEDFSQFVYWRE 556 (567)
Q Consensus 544 --~~~~~~~~~~w~~ 556 (567)
....|+.| |..
T Consensus 562 d~~~~~~~v~--~Sp 574 (580)
T COG5083 562 DFIDHSFSVF--WSP 574 (580)
T ss_pred cccccccccc--CCC
Confidence 33445544 875
No 5
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=100.00 E-value=3.5e-62 Score=459.86 Aligned_cols=157 Identities=62% Similarity=1.125 Sum_probs=155.1
Q ss_pred EEEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCcee
Q psy12533 360 IVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPML 439 (567)
Q Consensus 360 iVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GPvl 439 (567)
|||||||||||+||++||+++++|+||+|+|||+||++|++|||+|+||||||+||+++||+||++++|+|++||+|||+
T Consensus 1 VVvsDIDGTiT~SD~~G~i~~~~G~d~~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~~L~~~~q~~~~lP~Gpv~ 80 (157)
T PF08235_consen 1 VVVSDIDGTITKSDVLGHILPILGKDWTHPGAAELYRKIADNGYKILYLTARPIGQANRTRSWLAQHQQQGHNLPDGPVL 80 (157)
T ss_pred CEEEeccCCcCccchhhhhhhccCchhhhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHHHHHHHHhCCccCCCCCEE
Confidence 69999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCchhhhhhhhhhccChhHHHHHHHHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCCCCCEEEEcCCCccccc
Q psy12533 440 LNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLSRIFTINSRGEVKHE 516 (567)
Q Consensus 440 ~spd~l~~al~rEvi~k~p~~fK~~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~~rIF~In~~g~~~~~ 516 (567)
++|+++++||+||++.++|++||++||++|+++||...+|||||||||.||+.||++||||++|||+||++|++++|
T Consensus 81 ~sP~~l~~al~rEvi~~~p~~fK~~~L~~l~~~f~~~~~pf~agfGN~~tDv~aY~~vGip~~rIF~I~~~g~~~~~ 157 (157)
T PF08235_consen 81 LSPDSLFSALHREVISKDPEEFKIACLRDLRALFPPDGNPFYAGFGNRSTDVIAYKAVGIPKSRIFIINPKGEVKQE 157 (157)
T ss_pred ECCcchhhhhhccccccChHHHHHHHHHHHHHhcCCCCCeEEEecCCcHHHHHHHHHcCCChhhEEEECCCCeEecC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999875
No 6
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=100.00 E-value=4.3e-61 Score=452.47 Aligned_cols=157 Identities=62% Similarity=1.125 Sum_probs=155.2
Q ss_pred EEEEecCCccccCCccccccccccccccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCcee
Q psy12533 85 IVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPML 164 (567)
Q Consensus 85 iVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GPll 164 (567)
|||||||||||+||++||+++++|+||+|+|||+||++|++|||+|+||||||++|+++||+||++++|+|++||+|||+
T Consensus 1 VVvsDIDGTiT~SD~~G~i~~~~G~d~~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~~L~~~~q~~~~lP~Gpv~ 80 (157)
T PF08235_consen 1 VVVSDIDGTITKSDVLGHILPILGKDWTHPGAAELYRKIADNGYKILYLTARPIGQANRTRSWLAQHQQQGHNLPDGPVL 80 (157)
T ss_pred CEEEeccCCcCccchhhhhhhccCchhhhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHHHHHHHHhCCccCCCCCEE
Confidence 69999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCchhhhhhhhhhccChhHHHHHHHHHHHHhCCCCCCCEEEecCCcccchhhhhhcCCCCCCEEEEcCCCceecc
Q psy12533 165 LNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLSRIFTINSRGEVKHE 241 (567)
Q Consensus 165 lsp~~l~~al~REvi~k~p~~fKi~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~~rIF~In~~g~~~~~ 241 (567)
++|++|++||+||++.++|++||++||++|+++||...+|||||||||.||+.||++||||++|||+||++|++++|
T Consensus 81 ~sP~~l~~al~rEvi~~~p~~fK~~~L~~l~~~f~~~~~pf~agfGN~~tDv~aY~~vGip~~rIF~I~~~g~~~~~ 157 (157)
T PF08235_consen 81 LSPDSLFSALHREVISKDPEEFKIACLRDLRALFPPDGNPFYAGFGNRSTDVIAYKAVGIPKSRIFIINPKGEVKQE 157 (157)
T ss_pred ECCcchhhhhhccccccChHHHHHHHHHHHHHhcCCCCCeEEEecCCcHHHHHHHHHcCCChhhEEEECCCCeEecC
Confidence 99999999999999999999999999999999999889999999999999999999999999999999999999875
No 7
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=100.00 E-value=6.2e-44 Score=335.99 Aligned_cols=156 Identities=65% Similarity=1.142 Sum_probs=152.9
Q ss_pred EEEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCcee
Q psy12533 360 IVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPML 439 (567)
Q Consensus 360 iVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GPvl 439 (567)
+|+||||||||+||++||+++.+|++|+|+|++++|++++++||+|+|+||||+++++.||.||+.+.|.|+++|+||++
T Consensus 1 iVisDIDGTL~~sd~~~~~~~~~~~~~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~g~li 80 (157)
T smart00775 1 IVISDIDGTITKSDVLGHVVPIIGKDWTHPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQIKQDGHNLPHGPVL 80 (157)
T ss_pred CEEEecCCCCcccccccccccccccCcCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCCceEE
Confidence 59999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCchhhhhhhhhhccChhHHHHHHHHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCCCCCEEEEcCCCcccc
Q psy12533 440 LNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLSRIFTINSRGEVKH 515 (567)
Q Consensus 440 ~spd~l~~al~rEvi~k~p~~fK~~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~~rIF~In~~g~~~~ 515 (567)
+++++++.++.+|++.++|++||+++|+.|.++||...+|||+|||||+||+.+|+++|||++|||+|||+|++.+
T Consensus 81 ~~~g~~~~~~~~e~i~~~~~~~K~~~l~~i~~~~~~~~~~f~~~~gn~~~D~~~y~~~gi~~~~i~~i~~~~~~~~ 156 (157)
T smart00775 81 LSPDRLFAALHREVISKKPEVFKIACLRDIKSLFPPQGNPFYAGFGNRITDVISYSAVGIPPSRIFTINPKGEVHQ 156 (157)
T ss_pred EcCCcchhhhhcccccCCHHHHHHHHHHHHHHhcCCCCCCEEEEeCCCchhHHHHHHcCCChhhEEEECCCCcccc
Confidence 9999999999999999999999999999999999988999999999999999999999999999999999999875
No 8
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=100.00 E-value=6.8e-44 Score=335.72 Aligned_cols=156 Identities=65% Similarity=1.142 Sum_probs=152.9
Q ss_pred EEEEecCCccccCCccccccccccccccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCcee
Q psy12533 85 IVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPML 164 (567)
Q Consensus 85 iVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GPll 164 (567)
+|+||||||||+||++||+++.+|++|+|+|++++|++++++||+|+||||||+++++.||.||+.+.|.|+++|.||++
T Consensus 1 iVisDIDGTL~~sd~~~~~~~~~~~~~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~g~li 80 (157)
T smart00775 1 IVISDIDGTITKSDVLGHVVPIIGKDWTHPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQIKQDGHNLPHGPVL 80 (157)
T ss_pred CEEEecCCCCcccccccccccccccCcCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCCceEE
Confidence 59999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCchhhhhhhhhhccChhHHHHHHHHHHHHhCCCCCCCEEEecCCcccchhhhhhcCCCCCCEEEEcCCCceec
Q psy12533 165 LNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLSRIFTINSRGEVKH 240 (567)
Q Consensus 165 lsp~~l~~al~REvi~k~p~~fKi~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~~rIF~In~~g~~~~ 240 (567)
+++++++.++.+|++.++|++||+++|++|+++||+..+|||+|||||++|+.+|+++|||++|||+|||+|++.+
T Consensus 81 ~~~g~~~~~~~~e~i~~~~~~~K~~~l~~i~~~~~~~~~~f~~~~gn~~~D~~~y~~~gi~~~~i~~i~~~~~~~~ 156 (157)
T smart00775 81 LSPDRLFAALHREVISKKPEVFKIACLRDIKSLFPPQGNPFYAGFGNRITDVISYSAVGIPPSRIFTINPKGEVHQ 156 (157)
T ss_pred EcCCcchhhhhcccccCCHHHHHHHHHHHHHHhcCCCCCCEEEEeCCCchhHHHHHHcCCChhhEEEECCCCcccc
Confidence 9999999999999999999999999999999999988999999999999999999999999999999999999875
No 9
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=99.01 E-value=5.1e-10 Score=114.15 Aligned_cols=178 Identities=18% Similarity=0.186 Sum_probs=124.2
Q ss_pred eccCCHHHHHhCcCCCCCceeEEE-EEeccCCcc-eeeeEE--EE-ecCCCcEEEEecCCccccCCccccc-cccccccc
Q psy12533 38 TLRLTSEQIAGLELRSGMNEVEFS-VTTAYQGTT-RCKCYL--FK-WRWNDKIVISDIDGTITKSDVLGHV-LPIMGKDW 111 (567)
Q Consensus 38 ~lrlts~qL~~l~Lk~G~N~v~f~-v~t~~qG~~-~~~~~i--yl-w~~~~kiVISDIDGTITkSD~lG~i-l~~lGkDw 111 (567)
-|..+.+++..++.++|...+.-. +.+++.-.. ..+.+. +. .....+++++|+||||......+++ +.....+-
T Consensus 108 ~l~~~~e~~~~R~~~R~~~~~~~~~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~D~dgtl~~~~~~~~~~~~~~~~~~ 187 (300)
T PHA02530 108 VFDVPVEELVKRNRKRGERAVPEDVLRSMFKQMKEYRGLVWPVYTADPGLPKAVIFDIDGTLAKMGGRSPYDWTKVKEDK 187 (300)
T ss_pred EeCCCHHHHHHHHHccCcCCCCHHHHHHHHHHHHHhcCCCCceeccCCCCCCEEEEECCCcCcCCCCCCccchhhcccCC
Confidence 456778999999999987776544 444443221 122222 22 2233469999999999987766554 33344556
Q ss_pred cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhccChhH-HHHHH
Q psy12533 112 AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQE-FKISC 190 (567)
Q Consensus 112 th~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GPlllsp~~l~~al~REvi~k~p~~-fKi~~ 190 (567)
..+|+.++.+.++++|++++++|+|+..++..|.+||.. .+.+--.+...++ ...++|+...++|+- .+..+
T Consensus 188 ~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~-----~~~~f~~i~~~~~--~~~~~~~~~~~kp~p~~~~~~ 260 (300)
T PHA02530 188 PNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQ-----TDIWFDDLIGRPP--DMHFQREQGDKRPDDVVKEEI 260 (300)
T ss_pred CChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHH-----cCCchhhhhCCcc--hhhhcccCCCCCCcHHHHHHH
Confidence 678999999999999999999999999999999999977 3322223333331 334678877777764 78888
Q ss_pred HHHHHHhCCCCCCCEEEecCCcccchhhhhhcCCCC
Q psy12533 191 LRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPL 226 (567)
Q Consensus 191 L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~ 226 (567)
|+.+... ...-...+|++.+|+.+++++||++
T Consensus 261 l~~~~~~----~~~~~~~vgD~~~d~~~a~~~Gi~~ 292 (300)
T PHA02530 261 FWEKIAP----KYDVLLAVDDRDQVVDMWRRIGLEC 292 (300)
T ss_pred HHHHhcc----CceEEEEEcCcHHHHHHHHHhCCeE
Confidence 8775221 1123678999999999999999985
No 10
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=99.00 E-value=6.2e-10 Score=113.52 Aligned_cols=136 Identities=22% Similarity=0.225 Sum_probs=100.6
Q ss_pred eCCCeEEEEecCCccccCCccccc-ccccCcCCcchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccC
Q psy12533 355 RWNDKIVISDIDGTITKSDVLGHV-LPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTL 433 (567)
Q Consensus 355 ~~~~kiVIsDIDGTiTkSD~~G~~-~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~l 433 (567)
....+++++|+|||+......+++ +.....+-..+|+.+++++++++|++++++|+|+...+..|.+||.. .+.
T Consensus 155 ~~~~~~~~~D~dgtl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~-----~~~ 229 (300)
T PHA02530 155 PGLPKAVIFDIDGTLAKMGGRSPYDWTKVKEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQ-----TDI 229 (300)
T ss_pred CCCCCEEEEECCCcCcCCCCCCccchhhcccCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHH-----cCC
Confidence 344579999999999988766565 33344455788999999999999999999999999999999999977 332
Q ss_pred CCCceecCCCchhhhhhhhhhccCh-hHHHHHHHHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCCC
Q psy12533 434 PEGPMLLNPTSLLNAFHTEVIEKKP-QEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPL 501 (567)
Q Consensus 434 P~GPvl~spd~l~~al~rEvi~k~p-~~fK~~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~ 501 (567)
+--.+...+ ....++|+...++| -+.+..+|+.+.. .... -...+|++.+|+.+++++||++
T Consensus 230 ~f~~i~~~~--~~~~~~~~~~~~kp~p~~~~~~l~~~~~---~~~~-~~~~vgD~~~d~~~a~~~Gi~~ 292 (300)
T PHA02530 230 WFDDLIGRP--PDMHFQREQGDKRPDDVVKEEIFWEKIA---PKYD-VLLAVDDRDQVVDMWRRIGLEC 292 (300)
T ss_pred chhhhhCCc--chhhhcccCCCCCCcHHHHHHHHHHHhc---cCce-EEEEEcCcHHHHHHHHHhCCeE
Confidence 222333333 13346888777777 5677777776522 1112 3568999999999999999985
No 11
>COG4850 Uncharacterized conserved protein [Function unknown]
Probab=98.99 E-value=2.1e-09 Score=111.51 Aligned_cols=169 Identities=20% Similarity=0.258 Sum_probs=123.1
Q ss_pred hCcCCCCCceeEEEEEeccCCcc-ee-eeEEEEecCCCcEEEEecCCccccCCccccc----cccccc---cccchhHHH
Q psy12533 48 GLELRSGMNEVEFSVTTAYQGTT-RC-KCYLFKWRWNDKIVISDIDGTITKSDVLGHV----LPIMGK---DWAQNGVTR 118 (567)
Q Consensus 48 ~l~Lk~G~N~v~f~v~t~~qG~~-~~-~~~iylw~~~~kiVISDIDGTITkSD~lG~i----l~~lGk---Dwth~GVa~ 118 (567)
-+.+..|-++|...+. |.+ -+ .+.+-+.+...=-+|||||.||-.+++.+-- -..++. -|+-+||-.
T Consensus 128 ~~~~~~g~~av~lq~e----g~~~~Ae~~~~~v~~~a~igiISDiDDTV~~T~V~~~~r~~~~s~~l~~~tr~~ipGV~~ 203 (373)
T COG4850 128 PFPPTKGNHAVRLQSE----GEKIKAEAAPVPVLNRAGIGIISDIDDTVKVTGVTEGPRKAGRSLLLHALTRQVIPGVSA 203 (373)
T ss_pred ccCCCCCceeEEeecC----CCCcchhcccceeecccceeeeeccccceEecccccchHHHHHHhhhcccccCCCCCHHH
Confidence 3455566656665555 432 22 2344445555557999999999999995431 233444 378889999
Q ss_pred HHHHHHHCC-ceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCc-hhhhhhhhhhccChhHHHHHHHHHHHH
Q psy12533 119 LFTKIKENG-YKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTS-LLNAFHTEVIEKKPQEFKISCLRDIMA 196 (567)
Q Consensus 119 Ly~~i~~nG-Y~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GPlllsp~~-l~~al~REvi~k~p~~fKi~~L~~i~~ 196 (567)
+|+.+.+-| ..|+|||..||+......+||.. ++||.||++|..-+ .+.- +...-...|...|+.|..
T Consensus 204 ~yr~l~~~~~apvfYvSnSPw~~f~~L~efi~~-----~~~P~GPl~L~~~g~~~~~-----i~~sga~rK~~~l~nil~ 273 (373)
T COG4850 204 WYRALTNLGDAPVFYVSNSPWQLFPTLQEFITN-----RNFPYGPLLLRRWGGVLDN-----IIESGAARKGQSLRNILR 273 (373)
T ss_pred HHHHHHhcCCCCeEEecCChhHhHHHHHHHHhc-----CCCCCCchhHhhcCCcccc-----cccchhhhcccHHHHHHH
Confidence 999999998 99999999999999999999999 99999999988322 1111 222334568888887777
Q ss_pred hCCCCCCCEEEecCCcccchhhhhhc-CCCCCCEEEE
Q psy12533 197 LFPPNTQPFYAGYGNKVNDVWSYQAV-GIPLSRIFTI 232 (567)
Q Consensus 197 lf~~~~~pf~agfGNr~tDv~aY~~v-GIp~~rIF~I 232 (567)
-||. .-|+.-.+|...|.++|.++ ---++||.-|
T Consensus 274 ~~p~--~kfvLVGDsGE~DpeIYae~v~~fP~RIl~I 308 (373)
T COG4850 274 RYPD--RKFVLVGDSGEHDPEIYAEMVRCFPNRILGI 308 (373)
T ss_pred hCCC--ceEEEecCCCCcCHHHHHHHHHhCccceeeE
Confidence 7875 56899999999999999985 5556776444
No 12
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=98.79 E-value=2.7e-08 Score=91.64 Aligned_cols=102 Identities=19% Similarity=0.259 Sum_probs=77.1
Q ss_pred eEEEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHCCceEEEEccCcccchH------------HHHHHHHhc
Q psy12533 359 KIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSR------------VTREYLQSV 426 (567)
Q Consensus 359 kiVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~------------~Tr~~L~~~ 426 (567)
|+|+|||||||...+ .|.+. .+-.++.+.+..++++++|+.|+++|||+..... .|.+||+.
T Consensus 2 K~i~~DiDGTL~~~~-~~~y~----~~~~~~~~ie~L~~l~~~G~~IiiaTGR~~~~~~~n~~~i~~~~~~~t~~wL~k- 75 (126)
T TIGR01689 2 KRLVMDLDNTITLTE-NGDYA----NVAPILAVIEKLRHYKALGFEIVISSSRNMRTYEGNVGKINIHTLPIIILWLNQ- 75 (126)
T ss_pred CEEEEeCCCCcccCC-CCccc----ccccCHHHHHHHHHHHHCCCEEEEECCCCchhhhccccccchhhHHHHHHHHHH-
Confidence 689999999998653 22221 1346789999999999999999999999998876 99999999
Q ss_pred ccCCccCCCCceecCC-----CchhhhhhhhhhccChhHHHHHHHHHHHhhCC
Q psy12533 427 KQEDLTLPEGPMLLNP-----TSLLNAFHTEVIEKKPQEFKISCLRDIMALFP 474 (567)
Q Consensus 427 ~Q~~~~lP~GPvl~sp-----d~l~~al~rEvi~k~p~~fK~~~L~~i~~lf~ 474 (567)
|++|--.|++-. +++ .+.--.=+|++|..--.++|+.|..
T Consensus 76 ----~~ipYd~l~~~kp~~~~~~~----~~dD~~ir~~~~~~~~~~~~~~~~~ 120 (126)
T TIGR01689 76 ----HNVPYDEIYVGKPWCGHDGF----YVDDRAIRPSEFSSLTYDEINTLTK 120 (126)
T ss_pred ----cCCCCceEEeCCCcCCCCCc----eecchhhCHHHHHhcCHHHHHHHHh
Confidence 999976666654 233 2222223788888777888887764
No 13
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=98.74 E-value=2.8e-08 Score=88.16 Aligned_cols=93 Identities=20% Similarity=0.298 Sum_probs=75.3
Q ss_pred eEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhccChhHHHHHHHHHHHHhCCCCCCCEEEe
Q psy12533 129 KLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAG 208 (567)
Q Consensus 129 ~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GPlllsp~~l~~al~REvi~k~p~~fKi~~L~~i~~lf~~~~~pf~ag 208 (567)
+|+|||+.|+.+....++||.. +++|.||++|..-+.. .+.......+++|...|+.|...||. ..|+.-
T Consensus 1 pf~YvS~SPwnly~~l~~Fl~~-----~~~P~G~~~Lr~~~~~---~~~~~~~~~~~~K~~~i~~i~~~fP~--~kfiLI 70 (100)
T PF09949_consen 1 PFFYVSNSPWNLYPFLRDFLRR-----NGFPAGPLLLRDYGPS---LSGLFKSGAEEHKRDNIERILRDFPE--RKFILI 70 (100)
T ss_pred CEEEEcCCHHHHHHHHHHHHHh-----cCCCCCceEcccCCcc---ccccccCCchhHHHHHHHHHHHHCCC--CcEEEE
Confidence 5899999999999999999999 9999999999986332 12223333446999999999999995 789999
Q ss_pred cCCcccchhhhhhc-CCCCCCEEE
Q psy12533 209 YGNKVNDVWSYQAV-GIPLSRIFT 231 (567)
Q Consensus 209 fGNr~tDv~aY~~v-GIp~~rIF~ 231 (567)
.+|.+.|+++|.++ ---++||-.
T Consensus 71 GDsgq~DpeiY~~ia~~~P~~i~a 94 (100)
T PF09949_consen 71 GDSGQHDPEIYAEIARRFPGRILA 94 (100)
T ss_pred eeCCCcCHHHHHHHHHHCCCCEEE
Confidence 99999999999985 444555543
No 14
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=98.72 E-value=5.7e-08 Score=89.46 Aligned_cols=105 Identities=19% Similarity=0.258 Sum_probs=76.0
Q ss_pred cEEEEecCCccccCCccccccccccccccchhHHHHHHHHHHCCceEEEEccCcccchH------------HHHHHHHhc
Q psy12533 84 KIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSR------------VTREYLQSV 151 (567)
Q Consensus 84 kiVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~------------~Tr~~L~~~ 151 (567)
|+|++||||||...+ .|.+. .+-.++++.+..++++++|+.|+++|||+..... .|.+||+.
T Consensus 2 K~i~~DiDGTL~~~~-~~~y~----~~~~~~~~ie~L~~l~~~G~~IiiaTGR~~~~~~~n~~~i~~~~~~~t~~wL~k- 75 (126)
T TIGR01689 2 KRLVMDLDNTITLTE-NGDYA----NVAPILAVIEKLRHYKALGFEIVISSSRNMRTYEGNVGKINIHTLPIIILWLNQ- 75 (126)
T ss_pred CEEEEeCCCCcccCC-CCccc----ccccCHHHHHHHHHHHHCCCEEEEECCCCchhhhccccccchhhHHHHHHHHHH-
Confidence 689999999998653 22221 1346778999999999999999999999998877 99999999
Q ss_pred ccCCccCCCCceecCCC-chhhhhhhhhhccChhHHHHHHHHHHHHhC
Q psy12533 152 KQEDLTLPEGPMLLNPT-SLLNAFHTEVIEKKPQEFKISCLRDIMALF 198 (567)
Q Consensus 152 ~q~~~~LP~GPlllsp~-~l~~al~REvi~k~p~~fKi~~L~~i~~lf 198 (567)
+++|--.|++... .....+.+.--.=+|++|..--.+.|+.+.
T Consensus 76 ----~~ipYd~l~~~kp~~~~~~~~~dD~~ir~~~~~~~~~~~~~~~~ 119 (126)
T TIGR01689 76 ----HNVPYDEIYVGKPWCGHDGFYVDDRAIRPSEFSSLTYDEINTLT 119 (126)
T ss_pred ----cCCCCceEEeCCCcCCCCCceecchhhCHHHHHhcCHHHHHHHH
Confidence 9999766666652 000112233233378888766677777764
No 15
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=98.71 E-value=8.2e-08 Score=83.14 Aligned_cols=127 Identities=21% Similarity=0.195 Sum_probs=79.7
Q ss_pred EEEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccC--CCCc
Q psy12533 360 IVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTL--PEGP 437 (567)
Q Consensus 360 iVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~l--P~GP 437 (567)
++|||+||||+..+...+. .......+|+.+++++++++|++++.+|+|+ ....+.++.. +++ +...
T Consensus 1 ~~vfD~D~tl~~~~~~~~~---~~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~---~~~~~~~~~~-----~~~~~~~~~ 69 (139)
T cd01427 1 AVLFDLDGTLLDSEPGIAE---IEELELYPGVKEALKELKEKGIKLALATNKS---RREVLELLEE-----LGLDDYFDP 69 (139)
T ss_pred CeEEccCCceEccCccccc---cccCCcCcCHHHHHHHHHHCCCeEEEEeCch---HHHHHHHHHH-----cCCchhhhh
Confidence 4899999999998754333 2334578999999999999999999999999 4455777766 333 3333
Q ss_pred eecCCCchhh-------hhhhhhhccChhHHHHHHHHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCCC
Q psy12533 438 MLLNPTSLLN-------AFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPL 501 (567)
Q Consensus 438 vl~spd~l~~-------al~rEvi~k~p~~fK~~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~ 501 (567)
++.+.+.... ....+++..+|...+...+.+... ..... ...+|++.+|+.+.+.+|++.
T Consensus 70 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~-~~~igD~~~d~~~~~~~g~~~ 136 (139)
T cd01427 70 VITSNGAAIYYPKEGLFLGGGPFDIGKPNPDKLLAALKLLG---VDPEE-VLMVGDSLNDIEMAKAAGGLG 136 (139)
T ss_pred eeccchhhhhcccccccccccccccCCCCHHHHHHHHHHcC---CChhh-EEEeCCCHHHHHHHHHcCCce
Confidence 3332222110 001122222553333333222222 22223 568999999999999998763
No 16
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=98.66 E-value=2.3e-07 Score=93.40 Aligned_cols=127 Identities=22% Similarity=0.248 Sum_probs=93.7
Q ss_pred CCCeEEEEecCCccccCCc------cc-ccc--------cccCcCCcchhHHHHHHHHHHCCceEEEEccCcccchHHHH
Q psy12533 356 WNDKIVISDIDGTITKSDV------LG-HVL--------PIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTR 420 (567)
Q Consensus 356 ~~~kiVIsDIDGTiTkSD~------~G-~~~--------~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr 420 (567)
.+..+||+|||-|+-.+-- .| .-+ -.-|+-.+-||+.+++++++++|++|+|||+|+..+.+.|.
T Consensus 75 dg~~A~V~DIDET~LsN~py~~~~~~g~~~~~~~~~~~wv~~~~apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~ 154 (229)
T TIGR01675 75 DGMDAWIFDVDDTLLSNIPYYKKHGYGTEKTDPTAFWLWLGKGAAPALPEGLKLYQKIIELGIKIFLLSGRWEELRNATL 154 (229)
T ss_pred CCCcEEEEccccccccCHHHHHHhccCCCcCCHHHHHHHHHcCCCCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHH
Confidence 4557899999999886531 11 111 12455667889999999999999999999999999999999
Q ss_pred HHHHhcccCCccCCC-CceecCCCchhhhhhhhhh--ccChhHHHHHHHHHHHhhCCCCCCCEEEecCCCcccHHhHHHc
Q psy12533 421 EYLQSVKQEDLTLPE-GPMLLNPTSLLNAFHTEVI--EKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAV 497 (567)
Q Consensus 421 ~~L~~~~Q~~~~lP~-GPvl~spd~l~~al~rEvi--~k~p~~fK~~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~v 497 (567)
++|.. .++|. .-|++ |..- .+..-+||.+..+.+.. .+--+.+-+|+.-+|. .
T Consensus 155 ~nL~~-----~G~~~~~~LiL----------R~~~d~~~~~~~yKs~~R~~l~~----~GYrIv~~iGDq~sDl-----~ 210 (229)
T TIGR01675 155 DNLIN-----AGFTGWKHLIL----------RGLEDSNKTVVTYKSEVRKSLME----EGYRIWGNIGDQWSDL-----L 210 (229)
T ss_pred HHHHH-----cCCCCcCeeee----------cCCCCCCchHhHHHHHHHHHHHh----CCceEEEEECCChHHh-----c
Confidence 99998 78883 23333 3221 22336789999888887 3445689999999998 3
Q ss_pred CCCCC-CEEE
Q psy12533 498 GIPLS-RIFT 506 (567)
Q Consensus 498 GIp~~-rIF~ 506 (567)
|-+.+ |+|-
T Consensus 211 G~~~~~RtFK 220 (229)
T TIGR01675 211 GSPPGRRTFK 220 (229)
T ss_pred CCCccCceee
Confidence 55665 8875
No 17
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=98.65 E-value=1.3e-07 Score=81.86 Aligned_cols=126 Identities=22% Similarity=0.215 Sum_probs=79.4
Q ss_pred EEEEecCCccccCCccccccccccccccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccC--CCCc
Q psy12533 85 IVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTL--PEGP 162 (567)
Q Consensus 85 iVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~L--P~GP 162 (567)
++|||+||||++.+...+. .......+|+.++.+.++++|++++.+|+|+ ....+.++.. .++ +...
T Consensus 1 ~~vfD~D~tl~~~~~~~~~---~~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~---~~~~~~~~~~-----~~~~~~~~~ 69 (139)
T cd01427 1 AVLFDLDGTLLDSEPGIAE---IEELELYPGVKEALKELKEKGIKLALATNKS---RREVLELLEE-----LGLDDYFDP 69 (139)
T ss_pred CeEEccCCceEccCccccc---cccCCcCcCHHHHHHHHHHCCCeEEEEeCch---HHHHHHHHHH-----cCCchhhhh
Confidence 4899999999998764443 2344678899999999999999999999998 4555777766 333 3333
Q ss_pred eecCCCchhh-------hhhhhhhccChhHHHHHHHHHHHHhCCCCCCCEEEecCCcccchhhhhhcCCC
Q psy12533 163 MLLNPTSLLN-------AFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIP 225 (567)
Q Consensus 163 lllsp~~l~~-------al~REvi~k~p~~fKi~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp 225 (567)
++.+.+.... ....+++..+|...+... +...+...... ...+|++.+|+.+.+.+|++
T Consensus 70 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~-~~~igD~~~d~~~~~~~g~~ 135 (139)
T cd01427 70 VITSNGAAIYYPKEGLFLGGGPFDIGKPNPDKLLA---ALKLLGVDPEE-VLMVGDSLNDIEMAKAAGGL 135 (139)
T ss_pred eeccchhhhhcccccccccccccccCCCCHHHHHH---HHHHcCCChhh-EEEeCCCHHHHHHHHHcCCc
Confidence 3333222110 000112222454333333 22222221222 67899999999999999876
No 18
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=98.64 E-value=1.4e-07 Score=96.89 Aligned_cols=128 Identities=20% Similarity=0.271 Sum_probs=90.5
Q ss_pred CCeEEEEecCCccccC-Cccc-cc--------------ccccCcCCcchhHHHHHHHHHHCCceEEEEccCcccchHHHH
Q psy12533 357 NDKIVISDIDGTITKS-DVLG-HV--------------LPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTR 420 (567)
Q Consensus 357 ~~kiVIsDIDGTiTkS-D~~G-~~--------------~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr 420 (567)
+.-+||+|||+|+..+ .-.+ |. +-..|+..+-||+.+||+.++++|++|+|||+|+..+.+.|.
T Consensus 100 ~~dA~V~DIDET~LsN~pY~~~~~~g~e~~~~~~w~~~Wv~~~~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT~ 179 (275)
T TIGR01680 100 EKDTFLFNIDGTALSNIPYYKKHGYGSEKFDSELYDEEFVNKGEAPALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVTE 179 (275)
T ss_pred CCCEEEEECccccccCHHHHHHhcCCCCcCChhhhhHHHHhcccCCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHHH
Confidence 4568999999998832 1111 11 112334456789999999999999999999999999999999
Q ss_pred HHHHhcccCCccCCCCceecCCCchhhhhhhhhhc---cChhHHHHHHHHHHHhhCCCCCCCEEEecCCCcccHHhHHHc
Q psy12533 421 EYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIE---KKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAV 497 (567)
Q Consensus 421 ~~L~~~~Q~~~~lP~GPvl~spd~l~~al~rEvi~---k~p~~fK~~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~v 497 (567)
+||.. .++|. .+.|+ +|..-+ +..-.+|.+..+.+.. ++--+.+.+|+.-+|. .
T Consensus 180 ~NL~k-----aGy~~------~~~Li---LR~~~D~~~~~av~yKs~~R~~li~----eGYrIv~~iGDq~sDl-----~ 236 (275)
T TIGR01680 180 ANLKK-----AGYHT------WEKLI---LKDPQDNSAENAVEYKTAARAKLIQ----EGYNIVGIIGDQWNDL-----K 236 (275)
T ss_pred HHHHH-----cCCCC------cceee---ecCCCCCccchhHHHHHHHHHHHHH----cCceEEEEECCCHHhc-----c
Confidence 99988 78873 23332 332221 1225789898888776 3445689999999998 4
Q ss_pred CCCC--CCEEEE
Q psy12533 498 GIPL--SRIFTI 507 (567)
Q Consensus 498 GIp~--~rIF~I 507 (567)
|-+. .|.|-.
T Consensus 237 G~~~g~~RtFKL 248 (275)
T TIGR01680 237 GEHRGAIRSFKL 248 (275)
T ss_pred CCCccCcceecC
Confidence 6654 577753
No 19
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=98.56 E-value=4.3e-07 Score=91.49 Aligned_cols=127 Identities=22% Similarity=0.219 Sum_probs=90.8
Q ss_pred CcEEEEecCCccccCCc--ccccc-------------ccccccccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHH
Q psy12533 83 DKIVISDIDGTITKSDV--LGHVL-------------PIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREY 147 (567)
Q Consensus 83 ~kiVISDIDGTITkSD~--lG~il-------------~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~ 147 (567)
..+||+|||.|+..+-- ..|.. -.-|+.-+-+|+.+||++++++|++|+|||+|+..+.+.|.++
T Consensus 77 ~~A~V~DIDET~LsN~py~~~~~~g~~~~~~~~~~~wv~~~~apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~n 156 (229)
T TIGR01675 77 MDAWIFDVDDTLLSNIPYYKKHGYGTEKTDPTAFWLWLGKGAAPALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDN 156 (229)
T ss_pred CcEEEEccccccccCHHHHHHhccCCCcCCHHHHHHHHHcCCCCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHH
Confidence 34999999999886542 11111 1244555667999999999999999999999999999999999
Q ss_pred HHhcccCCccCCC-CceecCCCchhhhhhhhhhccChhHHHHHHHHHHHHhCCCCCCCEEEecCCcccchhhhhhcCCCC
Q psy12533 148 LQSVKQEDLTLPE-GPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPL 226 (567)
Q Consensus 148 L~~~~q~~~~LP~-GPlllsp~~l~~al~REvi~k~p~~fKi~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~ 226 (567)
|.. .++|. .-|+|.+.. --.+..-.||.+..+.+..- +--+++-+|+..+|.. |-+.
T Consensus 157 L~~-----~G~~~~~~LiLR~~~--------d~~~~~~~yKs~~R~~l~~~----GYrIv~~iGDq~sDl~-----G~~~ 214 (229)
T TIGR01675 157 LIN-----AGFTGWKHLILRGLE--------DSNKTVVTYKSEVRKSLMEE----GYRIWGNIGDQWSDLL-----GSPP 214 (229)
T ss_pred HHH-----cCCCCcCeeeecCCC--------CCCchHhHHHHHHHHHHHhC----CceEEEEECCChHHhc-----CCCc
Confidence 999 78884 344544310 01222334899998887763 4456899999999983 4555
Q ss_pred C-CEEE
Q psy12533 227 S-RIFT 231 (567)
Q Consensus 227 ~-rIF~ 231 (567)
+ |+|-
T Consensus 215 ~~RtFK 220 (229)
T TIGR01675 215 GRRTFK 220 (229)
T ss_pred cCceee
Confidence 4 8875
No 20
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=98.53 E-value=4.2e-08 Score=98.36 Aligned_cols=135 Identities=21% Similarity=0.305 Sum_probs=91.6
Q ss_pred CCCeEEEEecCCccccC-Cccc-c------c-------ccccCcCCcchhHHHHHHHHHHCCceEEEEccCcccchHHHH
Q psy12533 356 WNDKIVISDIDGTITKS-DVLG-H------V-------LPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTR 420 (567)
Q Consensus 356 ~~~kiVIsDIDGTiTkS-D~~G-~------~-------~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr 420 (567)
....+||||||+|+..+ ...+ + + +-.-|++.+-||+.+||+..+++|.+|+|+|+|+..+.+.|.
T Consensus 70 ~~~~avv~DIDeTvLsn~~y~~~~~~~~~~~~~~~w~~wv~~~~~~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~ 149 (229)
T PF03767_consen 70 DKPPAVVFDIDETVLSNSPYYAYLIFGGESFSPEDWDEWVASGKAPAIPGALELYNYARSRGVKVFFITGRPESQREATE 149 (229)
T ss_dssp TSEEEEEEESBTTTEEHHHHHHHHHHHTHHH-CCHHHHHHHCTGGEEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHH
T ss_pred CCCcEEEEECCcccccCHHHHHHHhhccCCCChHHHHHHHhcccCcccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHH
Confidence 56778999999998732 1101 0 0 111355567789999999999999999999999999999999
Q ss_pred HHHHhcccCCccCCC-CceecCCCchhhhhhhhhhccChhHHHHHHHHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCC
Q psy12533 421 EYLQSVKQEDLTLPE-GPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGI 499 (567)
Q Consensus 421 ~~L~~~~Q~~~~lP~-GPvl~spd~l~~al~rEvi~k~p~~fK~~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGI 499 (567)
++|.. .+++. -.+++.++.-. -.+..-.+|.+..+.|.. .+.-+.+-+|+..+|+...+..|-
T Consensus 150 ~nL~~-----~G~~~~~~l~lr~~~~~-------~~~~~~~yK~~~r~~i~~----~Gy~Ii~~iGD~~~D~~~~~~~~~ 213 (229)
T PF03767_consen 150 KNLKK-----AGFPGWDHLILRPDKDP-------SKKSAVEYKSERRKEIEK----KGYRIIANIGDQLSDFSGAKTAGA 213 (229)
T ss_dssp HHHHH-----HTTSTBSCGEEEEESST-------SS------SHHHHHHHHH----TTEEEEEEEESSGGGCHCTHHHHH
T ss_pred HHHHH-----cCCCccchhcccccccc-------ccccccccchHHHHHHHH----cCCcEEEEeCCCHHHhhccccccc
Confidence 99988 66664 33333332110 011225789999999988 344568899999999998444444
Q ss_pred CCCCEEE
Q psy12533 500 PLSRIFT 506 (567)
Q Consensus 500 p~~rIF~ 506 (567)
...|.|.
T Consensus 214 ~~~r~f~ 220 (229)
T PF03767_consen 214 RAERWFK 220 (229)
T ss_dssp HHTTEEE
T ss_pred ccceEEE
Confidence 3366654
No 21
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=98.53 E-value=5.1e-07 Score=92.89 Aligned_cols=130 Identities=19% Similarity=0.240 Sum_probs=88.0
Q ss_pred CCcEEEEecCCccccCC-cc-cccc--------------ccccccccchhHHHHHHHHHHCCceEEEEccCcccchHHHH
Q psy12533 82 NDKIVISDIDGTITKSD-VL-GHVL--------------PIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTR 145 (567)
Q Consensus 82 ~~kiVISDIDGTITkSD-~l-G~il--------------~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr 145 (567)
+..+||+|||+|+..+- -. .|.. -..|+.-+-+|+.+||+.++++|++|+|||+|+..+.+.|.
T Consensus 100 ~~dA~V~DIDET~LsN~pY~~~~~~g~e~~~~~~w~~~Wv~~~~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT~ 179 (275)
T TIGR01680 100 EKDTFLFNIDGTALSNIPYYKKHGYGSEKFDSELYDEEFVNKGEAPALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVTE 179 (275)
T ss_pred CCCEEEEECccccccCHHHHHHhcCCCCcCChhhhhHHHHhcccCCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHHH
Confidence 44599999999998321 11 1111 11223334679999999999999999999999999999999
Q ss_pred HHHHhcccCCccCCC-CceecCCCchhhhhhhhhhccChhHHHHHHHHHHHHhCCCCCCCEEEecCCcccchhhhhhcCC
Q psy12533 146 EYLQSVKQEDLTLPE-GPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGI 224 (567)
Q Consensus 146 ~~L~~~~q~~~~LP~-GPlllsp~~l~~al~REvi~k~p~~fKi~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGI 224 (567)
++|.. .++|. --|+|.+.+-. ..+..-.+|.+..+.+..- +--+.+.+|+.-+|. .|-
T Consensus 180 ~NL~k-----aGy~~~~~LiLR~~~D~-------~~~~av~yKs~~R~~li~e----GYrIv~~iGDq~sDl-----~G~ 238 (275)
T TIGR01680 180 ANLKK-----AGYHTWEKLILKDPQDN-------SAENAVEYKTAARAKLIQE----GYNIVGIIGDQWNDL-----KGE 238 (275)
T ss_pred HHHHH-----cCCCCcceeeecCCCCC-------ccchhHHHHHHHHHHHHHc----CceEEEEECCCHHhc-----cCC
Confidence 99998 78873 22444432110 0112224898887776653 345689999999998 355
Q ss_pred CC--CCEEEE
Q psy12533 225 PL--SRIFTI 232 (567)
Q Consensus 225 p~--~rIF~I 232 (567)
+. .|.|-.
T Consensus 239 ~~g~~RtFKL 248 (275)
T TIGR01680 239 HRGAIRSFKL 248 (275)
T ss_pred CccCcceecC
Confidence 43 477643
No 22
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=98.38 E-value=1.5e-07 Score=94.32 Aligned_cols=135 Identities=21% Similarity=0.307 Sum_probs=90.8
Q ss_pred CCCcEEEEecCCccccCCcc-c-cc-------------cccccccccchhHHHHHHHHHHCCceEEEEccCcccchHHHH
Q psy12533 81 WNDKIVISDIDGTITKSDVL-G-HV-------------LPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTR 145 (567)
Q Consensus 81 ~~~kiVISDIDGTITkSD~l-G-~i-------------l~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr 145 (567)
....+||+|||+|+..+-.. + +. +-.-|++.+-||+.+||+.++++|.+|+|+|+|+..+.+.|.
T Consensus 70 ~~~~avv~DIDeTvLsn~~y~~~~~~~~~~~~~~~w~~wv~~~~~~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~ 149 (229)
T PF03767_consen 70 DKPPAVVFDIDETVLSNSPYYAYLIFGGESFSPEDWDEWVASGKAPAIPGALELYNYARSRGVKVFFITGRPESQREATE 149 (229)
T ss_dssp TSEEEEEEESBTTTEEHHHHHHHHHHHTHHH-CCHHHHHHHCTGGEEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHH
T ss_pred CCCcEEEEECCcccccCHHHHHHHhhccCCCChHHHHHHHhcccCcccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHH
Confidence 34458999999998733111 1 11 011344556679999999999999999999999999999999
Q ss_pred HHHHhcccCCccCCC-CceecCCCchhhhhhhhhhccChhHHHHHHHHHHHHhCCCCCCCEEEecCCcccchhhhhhcCC
Q psy12533 146 EYLQSVKQEDLTLPE-GPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGI 224 (567)
Q Consensus 146 ~~L~~~~q~~~~LP~-GPlllsp~~l~~al~REvi~k~p~~fKi~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGI 224 (567)
..|.. .+++. -.+++.++.-. -.+..-.+|.+..+.|... +.-+++-+|+..+|....+..|-
T Consensus 150 ~nL~~-----~G~~~~~~l~lr~~~~~-------~~~~~~~yK~~~r~~i~~~----Gy~Ii~~iGD~~~D~~~~~~~~~ 213 (229)
T PF03767_consen 150 KNLKK-----AGFPGWDHLILRPDKDP-------SKKSAVEYKSERRKEIEKK----GYRIIANIGDQLSDFSGAKTAGA 213 (229)
T ss_dssp HHHHH-----HTTSTBSCGEEEEESST-------SS------SHHHHHHHHHT----TEEEEEEEESSGGGCHCTHHHHH
T ss_pred HHHHH-----cCCCccchhcccccccc-------ccccccccchHHHHHHHHc----CCcEEEEeCCCHHHhhccccccc
Confidence 99998 66765 34444443210 0112234899998888875 34568899999999998544444
Q ss_pred CCCCEEE
Q psy12533 225 PLSRIFT 231 (567)
Q Consensus 225 p~~rIF~ 231 (567)
...|.|.
T Consensus 214 ~~~r~f~ 220 (229)
T PF03767_consen 214 RAERWFK 220 (229)
T ss_dssp HHTTEEE
T ss_pred ccceEEE
Confidence 3356554
No 23
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=98.34 E-value=2.3e-06 Score=86.63 Aligned_cols=122 Identities=19% Similarity=0.266 Sum_probs=80.0
Q ss_pred EEEEecCCccccCCc---cc-ccccc-----------------cCcCC--cchhHHHHHHHHHHCCceEEEEccCcccch
Q psy12533 360 IVISDIDGTITKSDV---LG-HVLPI-----------------MGKDW--AQNGVTRLFTKIKENGYKLLYLSARAIGQS 416 (567)
Q Consensus 360 iVIsDIDGTiTkSD~---~G-~~~~~-----------------~GkDw--~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa 416 (567)
.|++|||||++-|-- .| +.+.. ..... ..+|+.+++++++++|++|.|+|+|+....
T Consensus 65 av~~DIDeTvldnsp~~~~~~~~f~~~~~~y~~~~~fw~~y~~~~~~~a~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~ 144 (237)
T PRK11009 65 AVGFDIDDTVLFSSPGFWRGKKTFSPGSEDYLKNQKFWEKMNNGWDEFSIPKEVARQLIDMHVKRGDSIYFITGRTATKT 144 (237)
T ss_pred EEEEECcCccccCCchheeeeeccCCCcccccChHHHHHHHHhcccccCcchHHHHHHHHHHHHCCCeEEEEeCCCCccc
Confidence 899999999997522 21 11100 01122 344699999999999999999999997777
Q ss_pred HHHHHHHHhcccCCccCCCC---ceecCCCchhhhhhhhhhccChhHHHHHHHHHHHhhCCCCCCCEEEecCCCcccHHh
Q psy12533 417 RVTREYLQSVKQEDLTLPEG---PMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWS 493 (567)
Q Consensus 417 ~~Tr~~L~~~~Q~~~~lP~G---Pvl~spd~l~~al~rEvi~k~p~~fK~~~L~~i~~lf~~~~~pf~agfGNr~tDv~a 493 (567)
+.|.++|.. .+++|.- ++++..+. . .+|. |..++++. .. ..-+|++.+|+.+
T Consensus 145 ~~t~~~Llk----~~gip~~~~f~vil~gd~---------~-~K~~--K~~~l~~~-------~i--~I~IGDs~~Di~a 199 (237)
T PRK11009 145 ETVSKTLAD----DFHIPADNMNPVIFAGDK---------P-GQYT--KTQWLKKK-------NI--RIFYGDSDNDITA 199 (237)
T ss_pred HHHHHHHHH----HcCCCcccceeEEEcCCC---------C-CCCC--HHHHHHhc-------CC--eEEEcCCHHHHHH
Confidence 777777664 2678743 33332221 1 1232 33444421 22 2349999999999
Q ss_pred HHHcCCCCCCEEE
Q psy12533 494 YQAVGIPLSRIFT 506 (567)
Q Consensus 494 Y~~vGIp~~rIF~ 506 (567)
-+++|+..-+++-
T Consensus 200 A~~AGi~~I~v~~ 212 (237)
T PRK11009 200 AREAGARGIRILR 212 (237)
T ss_pred HHHcCCcEEEEec
Confidence 9999999877744
No 24
>COG4850 Uncharacterized conserved protein [Function unknown]
Probab=98.30 E-value=4.5e-06 Score=87.23 Aligned_cols=164 Identities=19% Similarity=0.255 Sum_probs=115.3
Q ss_pred CcCCCCCceeEEEEEecccCee-ee-eeeEEeeeCCCeEEEEecCCccccCCccccc----ccccC---cCCcchhHHHH
Q psy12533 324 LELRSGMNEVEFSVTTAYQGTT-RC-KCYLFKWRWNDKIVISDIDGTITKSDVLGHV----LPIMG---KDWAQNGVTRL 394 (567)
Q Consensus 324 l~L~~G~n~V~f~v~s~~~g~~-~~-~~~iylw~~~~kiVIsDIDGTiTkSD~~G~~----~~~~G---kDw~h~Gva~l 394 (567)
+.+..|-++|+.-+. |.+ -+ .+.+-+.+...=-+|||||-||-.+++.+-- -+.++ ..|+-|||-.+
T Consensus 129 ~~~~~g~~av~lq~e----g~~~~Ae~~~~~v~~~a~igiISDiDDTV~~T~V~~~~r~~~~s~~l~~~tr~~ipGV~~~ 204 (373)
T COG4850 129 FPPTKGNHAVRLQSE----GEKIKAEAAPVPVLNRAGIGIISDIDDTVKVTGVTEGPRKAGRSLLLHALTRQVIPGVSAW 204 (373)
T ss_pred cCCCCCceeEEeecC----CCCcchhcccceeecccceeeeeccccceEecccccchHHHHHHhhhcccccCCCCCHHHH
Confidence 344456666666554 432 12 2334445555556999999999999986532 12222 34788999999
Q ss_pred HHHHHHCC-ceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecC-----CCchhhhhhhhhhccChhHHHHHHHHH
Q psy12533 395 FTKIKENG-YKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLN-----PTSLLNAFHTEVIEKKPQEFKISCLRD 468 (567)
Q Consensus 395 ~~~i~~nG-Y~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GPvl~s-----pd~l~~al~rEvi~k~p~~fK~~~L~~ 468 (567)
|+.+.+.| -.|.|||.-|+..-....+||.. ++||.||+++. ++.++ ..-..-|...|+.
T Consensus 205 yr~l~~~~~apvfYvSnSPw~~f~~L~efi~~-----~~~P~GPl~L~~~g~~~~~i~---------~sga~rK~~~l~n 270 (373)
T COG4850 205 YRALTNLGDAPVFYVSNSPWQLFPTLQEFITN-----RNFPYGPLLLRRWGGVLDNII---------ESGAARKGQSLRN 270 (373)
T ss_pred HHHHHhcCCCCeEEecCChhHhHHHHHHHHhc-----CCCCCCchhHhhcCCcccccc---------cchhhhcccHHHH
Confidence 99999999 99999999999999999999999 99999999987 33332 1234558888886
Q ss_pred HHhhCCCCCCCEEEecCCCcccHHhHHHc-CCCCCCEEEE
Q psy12533 469 IMALFPPNTQPFYAGYGNKVNDVWSYQAV-GIPLSRIFTI 507 (567)
Q Consensus 469 i~~lf~~~~~pf~agfGNr~tDv~aY~~v-GIp~~rIF~I 507 (567)
|..-||......+ =+|-..|...|..+ ---++||.-|
T Consensus 271 il~~~p~~kfvLV--GDsGE~DpeIYae~v~~fP~RIl~I 308 (373)
T COG4850 271 ILRRYPDRKFVLV--GDSGEHDPEIYAEMVRCFPNRILGI 308 (373)
T ss_pred HHHhCCCceEEEe--cCCCCcCHHHHHHHHHhCccceeeE
Confidence 6666776444433 34446799999985 5556666443
No 25
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=98.22 E-value=4.6e-06 Score=84.43 Aligned_cols=122 Identities=19% Similarity=0.259 Sum_probs=79.6
Q ss_pred EEEEecCCccccCCc---cc-ccccc-----------------ccccccc--hhHHHHHHHHHHCCceEEEEccCcccch
Q psy12533 85 IVISDIDGTITKSDV---LG-HVLPI-----------------MGKDWAQ--NGVTRLFTKIKENGYKLLYLSARAIGQS 141 (567)
Q Consensus 85 iVISDIDGTITkSD~---lG-~il~~-----------------lGkDwth--~GVa~Ly~~i~~nGY~ilYLSaRpi~~a 141 (567)
.|++|||||++-|-- .| +.+.. ...+.+. +|+.++++.++++|++|.|+|+|+....
T Consensus 65 av~~DIDeTvldnsp~~~~~~~~f~~~~~~y~~~~~fw~~y~~~~~~~a~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~ 144 (237)
T PRK11009 65 AVGFDIDDTVLFSSPGFWRGKKTFSPGSEDYLKNQKFWEKMNNGWDEFSIPKEVARQLIDMHVKRGDSIYFITGRTATKT 144 (237)
T ss_pred EEEEECcCccccCCchheeeeeccCCCcccccChHHHHHHHHhcccccCcchHHHHHHHHHHHHCCCeEEEEeCCCCccc
Confidence 899999999997522 22 11100 0112233 3699999999999999999999987777
Q ss_pred HHHHHHHHhcccCCccCCCC---ceecCCCchhhhhhhhhhccChhHHHHHHHHHHHHhCCCCCCCEEEecCCcccchhh
Q psy12533 142 RVTREYLQSVKQEDLTLPEG---PMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWS 218 (567)
Q Consensus 142 ~~Tr~~L~~~~q~~~~LP~G---Plllsp~~l~~al~REvi~k~p~~fKi~~L~~i~~lf~~~~~pf~agfGNr~tDv~a 218 (567)
+.|..+|.. .+++|.- ++++..+. . .+++ |..++++ . .. ..-+|+..+|+.+
T Consensus 145 ~~t~~~Llk----~~gip~~~~f~vil~gd~---------~-~K~~--K~~~l~~---~----~i--~I~IGDs~~Di~a 199 (237)
T PRK11009 145 ETVSKTLAD----DFHIPADNMNPVIFAGDK---------P-GQYT--KTQWLKK---K----NI--RIFYGDSDNDITA 199 (237)
T ss_pred HHHHHHHHH----HcCCCcccceeEEEcCCC---------C-CCCC--HHHHHHh---c----CC--eEEEcCCHHHHHH
Confidence 777777654 2678743 23332221 1 1222 4444442 2 22 3449999999999
Q ss_pred hhhcCCCCCCEEE
Q psy12533 219 YQAVGIPLSRIFT 231 (567)
Q Consensus 219 Y~~vGIp~~rIF~ 231 (567)
-+++|+..-+++-
T Consensus 200 A~~AGi~~I~v~~ 212 (237)
T PRK11009 200 AREAGARGIRILR 212 (237)
T ss_pred HHHcCCcEEEEec
Confidence 9999999876643
No 26
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=98.21 E-value=5.4e-06 Score=85.31 Aligned_cols=116 Identities=19% Similarity=0.295 Sum_probs=80.5
Q ss_pred CCCeEEEEecCCccccCCc-ccc-cccc---cCcCC----------cchhHHHHHHHHHHCCceEEEEccCcccchHHHH
Q psy12533 356 WNDKIVISDIDGTITKSDV-LGH-VLPI---MGKDW----------AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTR 420 (567)
Q Consensus 356 ~~~kiVIsDIDGTiTkSD~-~G~-~~~~---~GkDw----------~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr 420 (567)
....+||+|||+|+..+.- .|+ +... =.++| .-||+.++++.++++|+++.|+|+|+..+.+.|.
T Consensus 73 ~kp~AVV~DIDeTvLdns~y~~~~~~~~~~~~~~~w~~wv~~~~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~ 152 (266)
T TIGR01533 73 DKKYAIVLDLDETVLDNSPYQGYQVLNNKPFDPETWDKWVQAAQAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATL 152 (266)
T ss_pred CCCCEEEEeCccccccChHHHHHHhcCCCcCCHHHHHHHHHcCCCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHH
Confidence 3466899999999986652 111 1110 01233 4589999999999999999999999999999999
Q ss_pred HHHHhcccCCccCCC---CceecCCCchhhhhhhhhhccChhHHHHHHHHHHHhhCCCCCCCEEEecCCCcccHHhHHH
Q psy12533 421 EYLQSVKQEDLTLPE---GPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQA 496 (567)
Q Consensus 421 ~~L~~~~Q~~~~lP~---GPvl~spd~l~~al~rEvi~k~p~~fK~~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~ 496 (567)
.+|.. +++|. -+|++..++ . .|-...+.|.. .++ +++-+|++..|+.....
T Consensus 153 ~~Lkk-----~Gi~~~~~d~lllr~~~----------~-----~K~~rr~~I~~----~y~-Ivl~vGD~~~Df~~~~~ 206 (266)
T TIGR01533 153 KNLKR-----FGFPQADEEHLLLKKDK----------S-----SKESRRQKVQK----DYE-IVLLFGDNLLDFDDFFY 206 (266)
T ss_pred HHHHH-----cCcCCCCcceEEeCCCC----------C-----CcHHHHHHHHh----cCC-EEEEECCCHHHhhhhhc
Confidence 99988 78874 244443321 1 24444445554 344 47899999999976443
No 27
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=98.18 E-value=5.5e-06 Score=85.24 Aligned_cols=115 Identities=20% Similarity=0.324 Sum_probs=80.4
Q ss_pred CCcEEEEecCCccccCCc-ccc-cc---ccccccc----------cchhHHHHHHHHHHCCceEEEEccCcccchHHHHH
Q psy12533 82 NDKIVISDIDGTITKSDV-LGH-VL---PIMGKDW----------AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTRE 146 (567)
Q Consensus 82 ~~kiVISDIDGTITkSD~-lG~-il---~~lGkDw----------th~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~ 146 (567)
...+||+|||+|+..+.. .|+ +. +.=.++| .-+|+.++++.++++|++++|+|+|+..+.+.|..
T Consensus 74 kp~AVV~DIDeTvLdns~y~~~~~~~~~~~~~~~w~~wv~~~~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~ 153 (266)
T TIGR01533 74 KKYAIVLDLDETVLDNSPYQGYQVLNNKPFDPETWDKWVQAAQAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLK 153 (266)
T ss_pred CCCEEEEeCccccccChHHHHHHhcCCCcCCHHHHHHHHHcCCCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHH
Confidence 445999999999986652 111 11 1111234 44799999999999999999999999999999999
Q ss_pred HHHhcccCCccCCC---CceecCCCchhhhhhhhhhccChhHHHHHHHHHHHHhCCCCCCCEEEecCCcccchhhhhh
Q psy12533 147 YLQSVKQEDLTLPE---GPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQA 221 (567)
Q Consensus 147 ~L~~~~q~~~~LP~---GPlllsp~~l~~al~REvi~k~p~~fKi~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~ 221 (567)
+|+. +++|. -+|++.+++ ..|-.....|..- + -+++-+|++..|......
T Consensus 154 ~Lkk-----~Gi~~~~~d~lllr~~~---------------~~K~~rr~~I~~~----y-~Ivl~vGD~~~Df~~~~~ 206 (266)
T TIGR01533 154 NLKR-----FGFPQADEEHLLLKKDK---------------SSKESRRQKVQKD----Y-EIVLLFGDNLLDFDDFFY 206 (266)
T ss_pred HHHH-----cCcCCCCcceEEeCCCC---------------CCcHHHHHHHHhc----C-CEEEEECCCHHHhhhhhc
Confidence 9988 78874 355554421 1244445555542 3 348899999999976433
No 28
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=98.18 E-value=1.2e-05 Score=72.54 Aligned_cols=121 Identities=20% Similarity=0.274 Sum_probs=73.7
Q ss_pred eEEEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHCCceEEEEccCcccc-----hHHHHHHHHhcccCCccC
Q psy12533 359 KIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQ-----SRVTREYLQSVKQEDLTL 433 (567)
Q Consensus 359 kiVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~q-----a~~Tr~~L~~~~Q~~~~l 433 (567)
|+|+||+||||+.+ ++.....+.-...+||.+++..++++||++..+|.++... .+.++..|+. .++
T Consensus 1 k~~~~D~dgtL~~~---~~~~~~~~~~~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~-----~~l 72 (132)
T TIGR01662 1 KGVVLDLDGTLTDD---VPYVDDEDERILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEE-----LGV 72 (132)
T ss_pred CEEEEeCCCceecC---CCCCCCHHHheeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHH-----CCC
Confidence 68999999999943 2222222222357999999999999999999999997443 3445666666 455
Q ss_pred CCCceecCCCchhhhhhhhhhccChhHHHHHHHHHHHhhCCCCCCCEEEecCC-CcccHHhHHHcCCCC
Q psy12533 434 PEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGN-KVNDVWSYQAVGIPL 501 (567)
Q Consensus 434 P~GPvl~spd~l~~al~rEvi~k~p~~fK~~~L~~i~~lf~~~~~pf~agfGN-r~tDv~aY~~vGIp~ 501 (567)
+.=.+. +.. ....++|+.|+..+ +.+.. +++ ... .-+|+ ..+|+.+=+++|+..
T Consensus 73 ~~~~~~------~~~---~~~KP~~~~~~~~~-~~~~~-~~~-~~~--v~IGD~~~~Di~~A~~~Gi~~ 127 (132)
T TIGR01662 73 PIDVLY------ACP---HCRKPKPGMFLEAL-KRFNE-IDP-EES--VYVGDQDLTDLQAAKRAGLAF 127 (132)
T ss_pred CEEEEE------ECC---CCCCCChHHHHHHH-HHcCC-CCh-hhe--EEEcCCCcccHHHHHHCCCeE
Confidence 410011 111 11233445554332 22210 111 222 35788 589999999999863
No 29
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=98.13 E-value=1.2e-05 Score=72.47 Aligned_cols=120 Identities=21% Similarity=0.284 Sum_probs=72.7
Q ss_pred cEEEEecCCccccCCccccccccccccccchhHHHHHHHHHHCCceEEEEccCcccc-----hHHHHHHHHhcccCCccC
Q psy12533 84 KIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQ-----SRVTREYLQSVKQEDLTL 158 (567)
Q Consensus 84 kiVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~-----a~~Tr~~L~~~~q~~~~L 158 (567)
|+|+||+||||+.+ ++.....+.-...+||.++...++++||++..+|.++... .+.++..|+. .++
T Consensus 1 k~~~~D~dgtL~~~---~~~~~~~~~~~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~-----~~l 72 (132)
T TIGR01662 1 KGVVLDLDGTLTDD---VPYVDDEDERILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEE-----LGV 72 (132)
T ss_pred CEEEEeCCCceecC---CCCCCCHHHheeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHH-----CCC
Confidence 68999999999943 2222222223456899999999999999999999987443 3445556665 445
Q ss_pred CCCceecCCCchhhhhhhhhhccChhHHHHHHHHHHHHhCC-CCCCCEEEecCC-cccchhhhhhcCCCC
Q psy12533 159 PEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFP-PNTQPFYAGYGN-KVNDVWSYQAVGIPL 226 (567)
Q Consensus 159 P~GPlllsp~~l~~al~REvi~k~p~~fKi~~L~~i~~lf~-~~~~pf~agfGN-r~tDv~aY~~vGIp~ 226 (567)
+. +..+.+ . ....++|+.| ..+.+.++ -...- ..-+|+ ..+|+.+=+++|+..
T Consensus 73 ~~-------~~~~~~-~-~~~KP~~~~~-----~~~~~~~~~~~~~~-~v~IGD~~~~Di~~A~~~Gi~~ 127 (132)
T TIGR01662 73 PI-------DVLYAC-P-HCRKPKPGMF-----LEALKRFNEIDPEE-SVYVGDQDLTDLQAAKRAGLAF 127 (132)
T ss_pred CE-------EEEEEC-C-CCCCCChHHH-----HHHHHHcCCCChhh-eEEEcCCCcccHHHHHHCCCeE
Confidence 41 011100 0 1123333434 33333331 11111 334778 589999999999864
No 30
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=98.10 E-value=1.4e-05 Score=80.94 Aligned_cols=121 Identities=19% Similarity=0.331 Sum_probs=77.4
Q ss_pred EEEEecCCccccCCc---cccc-cc------ccCcC-C----------cchh--HHHHHHHHHHCCceEEEEccCcccch
Q psy12533 360 IVISDIDGTITKSDV---LGHV-LP------IMGKD-W----------AQNG--VTRLFTKIKENGYKLLYLSARAIGQS 416 (567)
Q Consensus 360 iVIsDIDGTiTkSD~---~G~~-~~------~~GkD-w----------~h~G--va~l~~~i~~nGY~iiYLSaRpi~qa 416 (567)
.|+||||||+.-|.. .|.- .+ ..|.+ | +.++ +.+++..++++|+++.|+|+|.....
T Consensus 65 aViFDlDgTLlDSs~~~~~G~~~~s~~~~~~l~g~~~w~~~~~~~~~~s~p~~~a~elL~~l~~~G~~i~iVTnr~~~k~ 144 (237)
T TIGR01672 65 AVSFDIDDTVLFSSPGFWRGKKTFSPGSEDYLKNQVFWEKVNNGWDEFSIPKEVARQLIDMHQRRGDAIFFVTGRTPGKT 144 (237)
T ss_pred EEEEeCCCccccCcHHHhCCcccCCHHHhhhhcChHHHHHHHHhcccCCcchhHHHHHHHHHHHCCCEEEEEeCCCCCcC
Confidence 799999999999977 5532 11 12222 2 2344 99999999999999999999965422
Q ss_pred -HHHHHHHHhcccCCccCCCC-ceecCCCchhhhhhhhhhccChhHHHHHHHHHHHhhCCCCCCCEEEecCCCcccHHhH
Q psy12533 417 -RVTREYLQSVKQEDLTLPEG-PMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSY 494 (567)
Q Consensus 417 -~~Tr~~L~~~~Q~~~~lP~G-Pvl~spd~l~~al~rEvi~k~p~~fK~~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY 494 (567)
..++..++. .++|.- ++++..+.. ...+|+. ..++++ ... ..-||++.+|+.+-
T Consensus 145 ~~~a~~ll~~-----lGi~~~f~~i~~~d~~--------~~~Kp~~--~~~l~~-------~~i--~i~vGDs~~DI~aA 200 (237)
T TIGR01672 145 DTVSKTLAKN-----FHIPAMNPVIFAGDKP--------GQYQYTK--TQWIQD-------KNI--RIHYGDSDNDITAA 200 (237)
T ss_pred HHHHHHHHHH-----hCCchheeEEECCCCC--------CCCCCCH--HHHHHh-------CCC--eEEEeCCHHHHHHH
Confidence 344444444 566641 233322211 1234553 334432 122 34699999999999
Q ss_pred HHcCCCCCCE
Q psy12533 495 QAVGIPLSRI 504 (567)
Q Consensus 495 ~~vGIp~~rI 504 (567)
+++|+..-++
T Consensus 201 k~AGi~~I~V 210 (237)
T TIGR01672 201 KEAGARGIRI 210 (237)
T ss_pred HHCCCCEEEE
Confidence 9999987665
No 31
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=97.96 E-value=4.2e-05 Score=77.48 Aligned_cols=121 Identities=20% Similarity=0.326 Sum_probs=77.1
Q ss_pred EEEEecCCccccCCc---cccc-cc------ccccc-c----------cchh--HHHHHHHHHHCCceEEEEccCcccc-
Q psy12533 85 IVISDIDGTITKSDV---LGHV-LP------IMGKD-W----------AQNG--VTRLFTKIKENGYKLLYLSARAIGQ- 140 (567)
Q Consensus 85 iVISDIDGTITkSD~---lG~i-l~------~lGkD-w----------th~G--Va~Ly~~i~~nGY~ilYLSaRpi~~- 140 (567)
.|+||||||++.|.. .|.- .+ ..|.. | +.++ +.++...++++|+++.|+|+|....
T Consensus 65 aViFDlDgTLlDSs~~~~~G~~~~s~~~~~~l~g~~~w~~~~~~~~~~s~p~~~a~elL~~l~~~G~~i~iVTnr~~~k~ 144 (237)
T TIGR01672 65 AVSFDIDDTVLFSSPGFWRGKKTFSPGSEDYLKNQVFWEKVNNGWDEFSIPKEVARQLIDMHQRRGDAIFFVTGRTPGKT 144 (237)
T ss_pred EEEEeCCCccccCcHHHhCCcccCCHHHhhhhcChHHHHHHHHhcccCCcchhHHHHHHHHHHHCCCEEEEEeCCCCCcC
Confidence 899999999999987 5532 11 12222 2 2334 9999999999999999999996542
Q ss_pred hHHHHHHHHhcccCCccCCCC-ceecCCCchhhhhhhhhhccChhHHHHHHHHHHHHhCCCCCCCEEEecCCcccchhhh
Q psy12533 141 SRVTREYLQSVKQEDLTLPEG-PMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSY 219 (567)
Q Consensus 141 a~~Tr~~L~~~~q~~~~LP~G-Plllsp~~l~~al~REvi~k~p~~fKi~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY 219 (567)
...++..++. .++|.= ++++..+.. ...+|+ |..++++ . .. ..-||++..|+.+-
T Consensus 145 ~~~a~~ll~~-----lGi~~~f~~i~~~d~~--------~~~Kp~--~~~~l~~---~----~i--~i~vGDs~~DI~aA 200 (237)
T TIGR01672 145 DTVSKTLAKN-----FHIPAMNPVIFAGDKP--------GQYQYT--KTQWIQD---K----NI--RIHYGDSDNDITAA 200 (237)
T ss_pred HHHHHHHHHH-----hCCchheeEEECCCCC--------CCCCCC--HHHHHHh---C----CC--eEEEeCCHHHHHHH
Confidence 2344445545 566531 233222211 123454 3334332 1 22 45699999999999
Q ss_pred hhcCCCCCCE
Q psy12533 220 QAVGIPLSRI 229 (567)
Q Consensus 220 ~~vGIp~~rI 229 (567)
+++|+..-++
T Consensus 201 k~AGi~~I~V 210 (237)
T TIGR01672 201 KEAGARGIRI 210 (237)
T ss_pred HHCCCCEEEE
Confidence 9999986655
No 32
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=97.80 E-value=7.2e-05 Score=66.51 Aligned_cols=94 Identities=20% Similarity=0.308 Sum_probs=68.9
Q ss_pred eEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhccChhHHHHHHHHHHHhhCCCCCCCEEEe
Q psy12533 404 KLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAG 483 (567)
Q Consensus 404 ~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GPvl~spd~l~~al~rEvi~k~p~~fK~~~L~~i~~lf~~~~~pf~ag 483 (567)
.|.|||+.|.......++||.. +++|.||+++..-+.. .+..+....++.|...|+.|...||...-.++.
T Consensus 1 pf~YvS~SPwnly~~l~~Fl~~-----~~~P~G~~~Lr~~~~~---~~~~~~~~~~~~K~~~i~~i~~~fP~~kfiLIG- 71 (100)
T PF09949_consen 1 PFFYVSNSPWNLYPFLRDFLRR-----NGFPAGPLLLRDYGPS---LSGLFKSGAEEHKRDNIERILRDFPERKFILIG- 71 (100)
T ss_pred CEEEEcCCHHHHHHHHHHHHHh-----cCCCCCceEcccCCcc---ccccccCCchhHHHHHHHHHHHHCCCCcEEEEe-
Confidence 4799999999999999999999 9999999999775221 112222233469999999999999975544432
Q ss_pred cCCCcccHHhHHHc-CCCCCCEEEE
Q psy12533 484 YGNKVNDVWSYQAV-GIPLSRIFTI 507 (567)
Q Consensus 484 fGNr~tDv~aY~~v-GIp~~rIF~I 507 (567)
+|-..|..+|.++ -=-++||-.|
T Consensus 72 -Dsgq~DpeiY~~ia~~~P~~i~ai 95 (100)
T PF09949_consen 72 -DSGQHDPEIYAEIARRFPGRILAI 95 (100)
T ss_pred -eCCCcCHHHHHHHHHHCCCCEEEE
Confidence 3446799999985 4445666443
No 33
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=97.76 E-value=0.00016 Score=67.02 Aligned_cols=127 Identities=17% Similarity=0.234 Sum_probs=73.8
Q ss_pred eEEEEecCCccccCCcccccccccCcCC-cchhHHHHHHHHHHCCceEEEEccCccc------ch------HHHHHHHHh
Q psy12533 359 KIVISDIDGTITKSDVLGHVLPIMGKDW-AQNGVTRLFTKIKENGYKLLYLSARAIG------QS------RVTREYLQS 425 (567)
Q Consensus 359 kiVIsDIDGTiTkSD~~G~~~~~~GkDw-~h~Gva~l~~~i~~nGY~iiYLSaRpi~------qa------~~Tr~~L~~ 425 (567)
++++||+||||+.-.... +. ....+| ..+|+.+++..++++||++.-+|+.+.. ++ ..++..|+.
T Consensus 1 ~~~~~d~dgtl~~~~~~~-~~-~~~~~~~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~ 78 (147)
T TIGR01656 1 PALFLDRDGVINEDTVSD-YP-RSLDDWQLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQ 78 (147)
T ss_pred CeEEEeCCCceeccCCcc-cC-CCHHHeEEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHh
Confidence 579999999999764322 21 122344 5889999999999999999999997632 11 344555555
Q ss_pred cccCCccCCCCceecCCCchhhhhhhhhhccChhHHHHHHHHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCC
Q psy12533 426 VKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIP 500 (567)
Q Consensus 426 ~~Q~~~~lP~GPvl~spd~l~~al~rEvi~k~p~~fK~~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp 500 (567)
.+++.=..+... ...+-....-.++|+.|... ...++....- ..-+|++..|+.+=+++||.
T Consensus 79 -----~~l~~~~~~~~~--~~~~~~~~~~KP~~~~~~~~-----~~~~~~~~~e-~i~IGDs~~Di~~A~~~Gi~ 140 (147)
T TIGR01656 79 -----LGVAVDGVLFCP--HHPADNCSCRKPKPGLILEA-----LKRLGVDASR-SLVVGDRLRDLQAARNAGLA 140 (147)
T ss_pred -----CCCceeEEEECC--CCCCCCCCCCCCCHHHHHHH-----HHHcCCChHH-EEEEcCCHHHHHHHHHCCCC
Confidence 555410111111 00000000113344444433 3333322222 34688999999999999996
No 34
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=97.76 E-value=0.00019 Score=68.56 Aligned_cols=128 Identities=17% Similarity=0.344 Sum_probs=77.3
Q ss_pred CCeEEEEecCCccccCCcccccccccCcCCc--chhHHHHHHHHHHCCceEEEEccCccc---------chHHHHHHHHh
Q psy12533 357 NDKIVISDIDGTITKSDVLGHVLPIMGKDWA--QNGVTRLFTKIKENGYKLLYLSARAIG---------QSRVTREYLQS 425 (567)
Q Consensus 357 ~~kiVIsDIDGTiTkSD~~G~~~~~~GkDw~--h~Gva~l~~~i~~nGY~iiYLSaRpi~---------qa~~Tr~~L~~ 425 (567)
..|++++|.||||+..+- ++..+.--.||. -+||.++.+.++++||++.-+|+.+.. ....++..|+.
T Consensus 12 ~~k~~~~D~Dgtl~~~~~-~~~~~~~~~~~~~~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~ 90 (166)
T TIGR01664 12 QSKVAAFDLDGTLITTRS-GKVFPTSASDWRFLYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEK 90 (166)
T ss_pred cCcEEEEeCCCceEecCC-CCcccCChHHeEEecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHH
Confidence 478999999999998642 121233335784 699999999999999999999986542 11244566666
Q ss_pred cccCCccCCCCceecCCCchhhhhhhhhhccChhHHHHHHHHHHHhhCCCCCCCEEEecCCCc--------ccHHhHHHc
Q psy12533 426 VKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKV--------NDVWSYQAV 497 (567)
Q Consensus 426 ~~Q~~~~lP~GPvl~spd~l~~al~rEvi~k~p~~fK~~~L~~i~~lf~~~~~pf~agfGNr~--------tDv~aY~~v 497 (567)
++++.-.++. .+.. . .-.++|+.|+.. ++.+...+.+ ...+| .|++. +|+.+=+++
T Consensus 91 -----~gl~~~~ii~-~~~~---~---~~KP~p~~~~~~-~~~~~~~~~~-~~~v~--VGD~~~~~~~~~~~Di~aA~~a 154 (166)
T TIGR01664 91 -----LKVPIQVLAA-THAG---L---YRKPMTGMWEYL-QSQYNSPIKM-TRSFY--VGDAAGRKLDFSDADIKFAKNL 154 (166)
T ss_pred -----cCCCEEEEEe-cCCC---C---CCCCccHHHHHH-HHHcCCCCCc-hhcEE--EECCCCCCCCCchhHHHHHHHC
Confidence 6665412222 2211 0 112334565533 2222100111 33444 55765 699999999
Q ss_pred CCCC
Q psy12533 498 GIPL 501 (567)
Q Consensus 498 GIp~ 501 (567)
||+.
T Consensus 155 Gi~~ 158 (166)
T TIGR01664 155 GLEF 158 (166)
T ss_pred CCCc
Confidence 9986
No 35
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=97.70 E-value=0.00012 Score=68.81 Aligned_cols=139 Identities=14% Similarity=0.245 Sum_probs=79.2
Q ss_pred eEEEEecCCccccCCc----ccccccccCcCC-cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccC
Q psy12533 359 KIVISDIDGTITKSDV----LGHVLPIMGKDW-AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTL 433 (567)
Q Consensus 359 kiVIsDIDGTiTkSD~----~G~~~~~~GkDw-~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~l 433 (567)
|+|+|||||||+..-+ .|+.. ++ | ..+|. ..++++++||++.-+|+++...+ +..+.. +++
T Consensus 2 ~~~~~D~Dgtl~~~~~~~~~~~~~~---~~-~~~~~~~--~i~~Lk~~G~~i~IvTn~~~~~~---~~~l~~-----~gi 67 (154)
T TIGR01670 2 RLLILDVDGVLTDGKIYYTNNGEEI---KA-FNVRDGY--GIRCALKSGIEVAIITGRKAKLV---EDRCKT-----LGI 67 (154)
T ss_pred eEEEEeCceeEEcCeEEECCCCcEE---EE-EechhHH--HHHHHHHCCCEEEEEECCCCHHH---HHHHHH-----cCC
Confidence 7899999999996311 12111 11 3 33444 78999999999999999987544 556665 555
Q ss_pred CCCceecCCCchhhhhhhhhhccChhHHHHHHHHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCCCCCEEEEcCCCcc
Q psy12533 434 PEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLSRIFTINSRGEV 513 (567)
Q Consensus 434 P~GPvl~spd~l~~al~rEvi~k~p~~fK~~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~~rIF~In~~g~~ 513 (567)
+. +|.. ...+|+.+ ..+..-..-.... ...+|+..+|+.+-+++|++ +..-+....+
T Consensus 68 ~~---------~~~~-----~~~k~~~~-----~~~~~~~~~~~~~-~~~vGDs~~D~~~~~~ag~~---~~v~~~~~~~ 124 (154)
T TIGR01670 68 TH---------LYQG-----QSNKLIAF-----SDILEKLALAPEN-VAYIGDDLIDWPVMEKVGLS---VAVADAHPLL 124 (154)
T ss_pred CE---------EEec-----ccchHHHH-----HHHHHHcCCCHHH-EEEECCCHHHHHHHHHCCCe---EecCCcCHHH
Confidence 42 1111 12334433 3333222211122 56799999999999999996 4333444333
Q ss_pred cccccccccccH---hhHHhhhhhc
Q psy12533 514 KHEMTQTFQSTY---SNMSYLVDQM 535 (567)
Q Consensus 514 ~~~~~~~~~~sY---~~l~~~vd~~ 535 (567)
.........+. .-+.++++.+
T Consensus 125 -~~~a~~i~~~~~~~g~~~~~~~~~ 148 (154)
T TIGR01670 125 -IPRADYVTRIAGGRGAVREVCELL 148 (154)
T ss_pred -HHhCCEEecCCCCCcHHHHHHHHH
Confidence 32232222222 2255665554
No 36
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=97.69 E-value=0.00015 Score=69.59 Aligned_cols=94 Identities=13% Similarity=0.202 Sum_probs=59.3
Q ss_pred chhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCC---CceecCCCchhhhhhhhhhccChhHHHHH
Q psy12533 388 QNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPE---GPMLLNPTSLLNAFHTEVIEKKPQEFKIS 464 (567)
Q Consensus 388 h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~---GPvl~spd~l~~al~rEvi~k~p~~fK~~ 464 (567)
.||+.+++..++++ |++.-+|+.....+ +.+|+. ++++. -.+....++... +.. ...|+ -|..
T Consensus 70 ~pg~~e~L~~L~~~-~~~~IvS~~~~~~~---~~~l~~-----~gl~~~f~~~~~~~~~~~i~---~~~-~~~p~-~k~~ 135 (205)
T PRK13582 70 LPGAVEFLDWLRER-FQVVILSDTFYEFA---GPLMRQ-----LGWPTLFCHSLEVDEDGMIT---GYD-LRQPD-GKRQ 135 (205)
T ss_pred CCCHHHHHHHHHhc-CCEEEEeCCcHHHH---HHHHHH-----cCCchhhcceEEECCCCeEE---Ccc-ccccc-hHHH
Confidence 58999999999999 99999998766544 566666 55542 111122222111 111 11232 3666
Q ss_pred HHHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCC
Q psy12533 465 CLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIP 500 (567)
Q Consensus 465 ~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp 500 (567)
+++.+... + . . ...+|+..+|+.+.+++|+.
T Consensus 136 ~l~~~~~~-~--~-~-~v~iGDs~~D~~~~~aa~~~ 166 (205)
T PRK13582 136 AVKALKSL-G--Y-R-VIAAGDSYNDTTMLGEADAG 166 (205)
T ss_pred HHHHHHHh-C--C-e-EEEEeCCHHHHHHHHhCCCC
Confidence 77766542 1 2 2 46899999999999999974
No 37
>PRK10976 putative hydrolase; Provisional
Probab=97.68 E-value=0.00014 Score=73.03 Aligned_cols=80 Identities=15% Similarity=0.239 Sum_probs=56.2
Q ss_pred eEEEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCce
Q psy12533 359 KIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPM 438 (567)
Q Consensus 359 kiVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GPv 438 (567)
|+|++|+||||..++- . ..+...+..++++++|++|+..|||+.... +.+++. .++ ++|+
T Consensus 3 kli~~DlDGTLl~~~~--~---------is~~~~~ai~~l~~~G~~~~iaTGR~~~~~---~~~~~~-----l~~-~~~~ 62 (266)
T PRK10976 3 QVVASDLDGTLLSPDH--T---------LSPYAKETLKLLTARGIHFVFATGRHHVDV---GQIRDN-----LEI-KSYM 62 (266)
T ss_pred eEEEEeCCCCCcCCCC--c---------CCHHHHHHHHHHHHCCCEEEEEcCCChHHH---HHHHHh-----cCC-CCeE
Confidence 7899999999998751 1 345578899999999999999999998754 666666 444 3677
Q ss_pred ecCCCchhhhhhhhhhccCh
Q psy12533 439 LLNPTSLLNAFHTEVIEKKP 458 (567)
Q Consensus 439 l~spd~l~~al~rEvi~k~p 458 (567)
+++...+.--...+++..++
T Consensus 63 I~~NGa~i~~~~~~~i~~~~ 82 (266)
T PRK10976 63 ITSNGARVHDTDGNLIFSHN 82 (266)
T ss_pred EEcCCcEEECCCCCEehhhc
Confidence 77665543212334444333
No 38
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=97.62 E-value=0.00037 Score=66.61 Aligned_cols=126 Identities=19% Similarity=0.397 Sum_probs=75.5
Q ss_pred CCcEEEEecCCccccCCcccccccccccccc--chhHHHHHHHHHHCCceEEEEccCccc---------chHHHHHHHHh
Q psy12533 82 NDKIVISDIDGTITKSDVLGHVLPIMGKDWA--QNGVTRLFTKIKENGYKLLYLSARAIG---------QSRVTREYLQS 150 (567)
Q Consensus 82 ~~kiVISDIDGTITkSD~lG~il~~lGkDwt--h~GVa~Ly~~i~~nGY~ilYLSaRpi~---------~a~~Tr~~L~~ 150 (567)
..|++++|.||||+..+- ++..+.--.||. -+||.++.+.++++||++.-+|+.+.. ....++..|+.
T Consensus 12 ~~k~~~~D~Dgtl~~~~~-~~~~~~~~~~~~~~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~ 90 (166)
T TIGR01664 12 QSKVAAFDLDGTLITTRS-GKVFPTSASDWRFLYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEK 90 (166)
T ss_pred cCcEEEEeCCCceEecCC-CCcccCChHHeEEecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHH
Confidence 468999999999998653 122233335685 589999999999999999999976542 11234556666
Q ss_pred cccCCccCCCCceecCCCchhhhhhhhhhccCh--hHHHHHHHHHHHHhCCCCCCCEEEecCCcc--------cchhhhh
Q psy12533 151 VKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKP--QEFKISCLRDIMALFPPNTQPFYAGYGNKV--------NDVWSYQ 220 (567)
Q Consensus 151 ~~q~~~~LP~GPlllsp~~l~~al~REvi~k~p--~~fKi~~L~~i~~lf~~~~~pf~agfGNr~--------tDv~aY~ 220 (567)
.+++.-.++ ..+. ...++| +.|+..+ +.+.....+ ..-+|. |++. +|+.+=+
T Consensus 91 -----~gl~~~~ii-~~~~--------~~~~KP~p~~~~~~~-~~~~~~~~~-~~~v~V--GD~~~~~~~~~~~Di~aA~ 152 (166)
T TIGR01664 91 -----LKVPIQVLA-ATHA--------GLYRKPMTGMWEYLQ-SQYNSPIKM-TRSFYV--GDAAGRKLDFSDADIKFAK 152 (166)
T ss_pred -----cCCCEEEEE-ecCC--------CCCCCCccHHHHHHH-HHcCCCCCc-hhcEEE--ECCCCCCCCCchhHHHHHH
Confidence 566531222 2211 112344 4444322 222100111 234454 4654 6999999
Q ss_pred hcCCCC
Q psy12533 221 AVGIPL 226 (567)
Q Consensus 221 ~vGIp~ 226 (567)
++||+.
T Consensus 153 ~aGi~~ 158 (166)
T TIGR01664 153 NLGLEF 158 (166)
T ss_pred HCCCCc
Confidence 999986
No 39
>PLN02954 phosphoserine phosphatase
Probab=97.62 E-value=0.00021 Score=69.62 Aligned_cols=100 Identities=14% Similarity=0.168 Sum_probs=57.4
Q ss_pred chhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCcee-----cCCCchhhhhh-hhhhccChhHH
Q psy12533 388 QNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPML-----LNPTSLLNAFH-TEVIEKKPQEF 461 (567)
Q Consensus 388 h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GPvl-----~spd~l~~al~-rEvi~k~p~~f 461 (567)
.||+.++++.++++|+++.-+|+.....+ +..|+. ++++.=.++ +..++.+.+.. .+... ...-
T Consensus 86 ~pg~~e~l~~l~~~g~~~~IvS~~~~~~i---~~~l~~-----~gi~~~~~~~~~~~~~~~g~~~g~~~~~~~~--~~~~ 155 (224)
T PLN02954 86 SPGIPELVKKLRARGTDVYLVSGGFRQMI---APVAAI-----LGIPPENIFANQILFGDSGEYAGFDENEPTS--RSGG 155 (224)
T ss_pred CccHHHHHHHHHHCCCEEEEECCCcHHHH---HHHHHH-----hCCChhhEEEeEEEEcCCCcEECccCCCccc--CCcc
Confidence 47999999999999999999999775544 444555 555421222 12222211110 01000 0112
Q ss_pred HHHHHHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCC
Q psy12533 462 KISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIP 500 (567)
Q Consensus 462 K~~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp 500 (567)
|-++++.++...+. . . ...+|+..+|+.|-++.|+.
T Consensus 156 K~~~i~~~~~~~~~-~-~-~i~iGDs~~Di~aa~~~~~~ 191 (224)
T PLN02954 156 KAEAVQHIKKKHGY-K-T-MVMIGDGATDLEARKPGGAD 191 (224)
T ss_pred HHHHHHHHHHHcCC-C-c-eEEEeCCHHHHHhhhcCCCC
Confidence 55666666553322 2 2 45799999999996666654
No 40
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=97.58 E-value=0.00026 Score=69.24 Aligned_cols=68 Identities=21% Similarity=0.281 Sum_probs=50.8
Q ss_pred CeEEEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCc
Q psy12533 358 DKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGP 437 (567)
Q Consensus 358 ~kiVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GP 437 (567)
-|+|++|+||||..++. -..+...+..++++++|.+|+.+|||+.... +.++.. .+++ +|
T Consensus 3 ~kli~~DlDGTLl~~~~-----------~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~---~~~~~~-----l~~~-~~ 62 (230)
T PRK01158 3 IKAIAIDIDGTITDKDR-----------RLSLKAVEAIRKAEKLGIPVILATGNVLCFA---RAAAKL-----IGTS-GP 62 (230)
T ss_pred eeEEEEecCCCcCCCCC-----------ccCHHHHHHHHHHHHCCCEEEEEcCCchHHH---HHHHHH-----hCCC-Cc
Confidence 37899999999997741 1345677889999999999999999997754 445544 4454 67
Q ss_pred eecCCCch
Q psy12533 438 MLLNPTSL 445 (567)
Q Consensus 438 vl~spd~l 445 (567)
+++....+
T Consensus 63 ~i~~nGa~ 70 (230)
T PRK01158 63 VIAENGGV 70 (230)
T ss_pred EEEecCeE
Confidence 77766544
No 41
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=97.56 E-value=0.00042 Score=64.22 Aligned_cols=127 Identities=17% Similarity=0.271 Sum_probs=73.4
Q ss_pred cEEEEecCCccccCCccccccccccccc-cchhHHHHHHHHHHCCceEEEEccCccc------ch------HHHHHHHHh
Q psy12533 84 KIVISDIDGTITKSDVLGHVLPIMGKDW-AQNGVTRLFTKIKENGYKLLYLSARAIG------QS------RVTREYLQS 150 (567)
Q Consensus 84 kiVISDIDGTITkSD~lG~il~~lGkDw-th~GVa~Ly~~i~~nGY~ilYLSaRpi~------~a------~~Tr~~L~~ 150 (567)
+++++|+||||+...... +.. ...+| ..+|+.+++..++++||++.-+|+.+.. .. ..++..|+.
T Consensus 1 ~~~~~d~dgtl~~~~~~~-~~~-~~~~~~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~ 78 (147)
T TIGR01656 1 PALFLDRDGVINEDTVSD-YPR-SLDDWQLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQ 78 (147)
T ss_pred CeEEEeCCCceeccCCcc-cCC-CHHHeEEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHh
Confidence 579999999999765322 211 12222 4679999999999999999999997631 11 344555555
Q ss_pred cccCCccCCCCceecCCCchhhhhhhhhhccChhHHHHHHHHHHHHhCCCCCCCEEEecCCcccchhhhhhcCCC
Q psy12533 151 VKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIP 225 (567)
Q Consensus 151 ~~q~~~~LP~GPlllsp~~l~~al~REvi~k~p~~fKi~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp 225 (567)
.+++.=..+... ...+ -+...++| |.+.+..+...++-...- ..-+|++..|+.+=+++||.
T Consensus 79 -----~~l~~~~~~~~~--~~~~--~~~~~~KP---~~~~~~~~~~~~~~~~~e-~i~IGDs~~Di~~A~~~Gi~ 140 (147)
T TIGR01656 79 -----LGVAVDGVLFCP--HHPA--DNCSCRKP---KPGLILEALKRLGVDASR-SLVVGDRLRDLQAARNAGLA 140 (147)
T ss_pred -----CCCceeEEEECC--CCCC--CCCCCCCC---CHHHHHHHHHHcCCChHH-EEEEcCCHHHHHHHHHCCCC
Confidence 455410111110 0000 00112244 333444444444322222 44578889999999999986
No 42
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=97.56 E-value=0.00018 Score=67.52 Aligned_cols=108 Identities=18% Similarity=0.306 Sum_probs=66.9
Q ss_pred cEEEEecCCccccCCc----cccccccccccc-cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccC
Q psy12533 84 KIVISDIDGTITKSDV----LGHVLPIMGKDW-AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTL 158 (567)
Q Consensus 84 kiVISDIDGTITkSD~----lG~il~~lGkDw-th~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~L 158 (567)
|+|++||||||+..-+ .|+.. ++ | ..+|. ..+.++++||++.-+|+++...+ +..++. .++
T Consensus 2 ~~~~~D~Dgtl~~~~~~~~~~~~~~---~~-~~~~~~~--~i~~Lk~~G~~i~IvTn~~~~~~---~~~l~~-----~gi 67 (154)
T TIGR01670 2 RLLILDVDGVLTDGKIYYTNNGEEI---KA-FNVRDGY--GIRCALKSGIEVAIITGRKAKLV---EDRCKT-----LGI 67 (154)
T ss_pred eEEEEeCceeEEcCeEEECCCCcEE---EE-EechhHH--HHHHHHHCCCEEEEEECCCCHHH---HHHHHH-----cCC
Confidence 6899999999996311 12221 22 3 23343 68889999999999999987544 556665 444
Q ss_pred CCCceecCCCchhhhhhhhhhccChhHHHHHHHHHHHHhCCCCCCCEEEecCCcccchhhhhhcCCC
Q psy12533 159 PEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIP 225 (567)
Q Consensus 159 P~GPlllsp~~l~~al~REvi~k~p~~fKi~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp 225 (567)
+. ++.. ...+| +.+..+.....-...- ...+|+..+|+.+-+.+|++
T Consensus 68 ~~---------~~~~-----~~~k~-----~~~~~~~~~~~~~~~~-~~~vGDs~~D~~~~~~ag~~ 114 (154)
T TIGR01670 68 TH---------LYQG-----QSNKL-----IAFSDILEKLALAPEN-VAYIGDDLIDWPVMEKVGLS 114 (154)
T ss_pred CE---------EEec-----ccchH-----HHHHHHHHHcCCCHHH-EEEECCCHHHHHHHHHCCCe
Confidence 41 1111 12233 3334443332211122 56799999999999999996
No 43
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=97.54 E-value=0.00032 Score=67.33 Aligned_cols=95 Identities=13% Similarity=0.222 Sum_probs=59.2
Q ss_pred chhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCC---CceecCCCchhhhhhhhhhccChhHHHHH
Q psy12533 113 QNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPE---GPMLLNPTSLLNAFHTEVIEKKPQEFKIS 189 (567)
Q Consensus 113 h~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~---GPlllsp~~l~~al~REvi~k~p~~fKi~ 189 (567)
.+|+.++...++++ |++.-+|+.... .++.+|+. .+++. -.+....++.... .. ...| .-|..
T Consensus 70 ~pg~~e~L~~L~~~-~~~~IvS~~~~~---~~~~~l~~-----~gl~~~f~~~~~~~~~~~i~~---~~-~~~p-~~k~~ 135 (205)
T PRK13582 70 LPGAVEFLDWLRER-FQVVILSDTFYE---FAGPLMRQ-----LGWPTLFCHSLEVDEDGMITG---YD-LRQP-DGKRQ 135 (205)
T ss_pred CCCHHHHHHHHHhc-CCEEEEeCCcHH---HHHHHHHH-----cCCchhhcceEEECCCCeEEC---cc-cccc-chHHH
Confidence 47999999999999 999999996554 44667766 45541 1111112221110 10 1123 23667
Q ss_pred HHHHHHHhCCCCCCCEEEecCCcccchhhhhhcCCCC
Q psy12533 190 CLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPL 226 (567)
Q Consensus 190 ~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~ 226 (567)
+++.+... + . -...+|+..+|+.+.+++|+..
T Consensus 136 ~l~~~~~~-~---~-~~v~iGDs~~D~~~~~aa~~~v 167 (205)
T PRK13582 136 AVKALKSL-G---Y-RVIAAGDSYNDTTMLGEADAGI 167 (205)
T ss_pred HHHHHHHh-C---C-eEEEEeCCHHHHHHHHhCCCCE
Confidence 77766543 2 1 2568899999999999999743
No 44
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=97.53 E-value=0.0002 Score=69.08 Aligned_cols=91 Identities=20% Similarity=0.356 Sum_probs=61.3
Q ss_pred EEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceec
Q psy12533 361 VISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLL 440 (567)
Q Consensus 361 VIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GPvl~ 440 (567)
|+|||||||..++ .. ..+-..+.++.++++|++++..|||+.... +.++.. .+++ .|+++
T Consensus 1 i~~DlDGTLl~~~----------~~-i~~~~~~al~~l~~~g~~~~i~TGR~~~~~---~~~~~~-----~~~~-~~~I~ 60 (254)
T PF08282_consen 1 IFSDLDGTLLNSD----------GK-ISPETIEALKELQEKGIKLVIATGRSYSSI---KRLLKE-----LGID-DYFIC 60 (254)
T ss_dssp EEEECCTTTCSTT----------SS-SCHHHHHHHHHHHHTTCEEEEECSSTHHHH---HHHHHH-----TTHC-SEEEE
T ss_pred cEEEECCceecCC----------Ce-eCHHHHHHHHhhcccceEEEEEccCccccc---cccccc-----ccch-hhhcc
Confidence 7899999998874 22 457889999999999999999999998765 666665 3444 67776
Q ss_pred CCCchhhhhhhhhhccCh--hHHHHHHHHHHHh
Q psy12533 441 NPTSLLNAFHTEVIEKKP--QEFKISCLRDIMA 471 (567)
Q Consensus 441 spd~l~~al~rEvi~k~p--~~fK~~~L~~i~~ 471 (567)
....+.---..|++...+ ...-.++++.+..
T Consensus 61 ~nGa~i~~~~~~~l~~~~i~~~~~~~i~~~~~~ 93 (254)
T PF08282_consen 61 SNGALIDDPKGKILYEKPIDSDDVKKILKYLKE 93 (254)
T ss_dssp GGGTEEEETTTEEEEEESB-HHHHHHHHHHHHH
T ss_pred cccceeeecccccchhhheeccchhheeehhhh
Confidence 665554233455554444 2233334444444
No 45
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=97.52 E-value=0.00033 Score=70.39 Aligned_cols=80 Identities=23% Similarity=0.397 Sum_probs=62.3
Q ss_pred CeEEEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCc
Q psy12533 358 DKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGP 437 (567)
Q Consensus 358 ~kiVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GP 437 (567)
-|+|++|+||||+.++. . .++-..+..++++++|++++..|||+...+ +.+++.+ ++. ||
T Consensus 3 ~kli~~DlDGTLl~~~~----------~-i~~~~~~al~~~~~~g~~v~iaTGR~~~~~---~~~~~~l-----~~~-~~ 62 (264)
T COG0561 3 IKLLAFDLDGTLLDSNK----------T-ISPETKEALARLREKGVKVVLATGRPLPDV---LSILEEL-----GLD-GP 62 (264)
T ss_pred eeEEEEcCCCCccCCCC----------c-cCHHHHHHHHHHHHCCCEEEEECCCChHHH---HHHHHHc-----CCC-cc
Confidence 58899999999999862 1 678889999999999999999999999554 7777773 333 38
Q ss_pred eecCCCchhhhhhhhhhccCh
Q psy12533 438 MLLNPTSLLNAFHTEVIEKKP 458 (567)
Q Consensus 438 vl~spd~l~~al~rEvi~k~p 458 (567)
+++...+..... .|++.+++
T Consensus 63 ~I~~NGa~i~~~-~~~i~~~~ 82 (264)
T COG0561 63 LITFNGALIYNG-GELLFQKP 82 (264)
T ss_pred EEEeCCeEEecC-CcEEeeec
Confidence 888777766544 56666555
No 46
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=97.51 E-value=0.00034 Score=69.96 Aligned_cols=81 Identities=21% Similarity=0.407 Sum_probs=57.9
Q ss_pred CeEEEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCc
Q psy12533 358 DKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGP 437 (567)
Q Consensus 358 ~kiVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GP 437 (567)
-|+++|||||||..++. ...+-..+..++++++|++|+..|||+... ++.+++. .++ .+|
T Consensus 3 ~kli~~DlDGTLl~~~~-----------~i~~~~~~ai~~~~~~G~~~~iaTGR~~~~---~~~~~~~-----l~~-~~~ 62 (272)
T PRK10530 3 YRVIALDLDGTLLTPKK-----------TILPESLEALARAREAGYKVIIVTGRHHVA---IHPFYQA-----LAL-DTP 62 (272)
T ss_pred ccEEEEeCCCceECCCC-----------ccCHHHHHHHHHHHHCCCEEEEEcCCChHH---HHHHHHh-----cCC-CCC
Confidence 47899999999997741 134556788999999999999999999764 3667766 344 467
Q ss_pred eecCCCchhhhh-hhhhhccCh
Q psy12533 438 MLLNPTSLLNAF-HTEVIEKKP 458 (567)
Q Consensus 438 vl~spd~l~~al-~rEvi~k~p 458 (567)
++++...+.--. ..|++..++
T Consensus 63 ~I~~NGa~i~d~~~~~~l~~~~ 84 (272)
T PRK10530 63 AICCNGTYLYDYQAKKVLEADP 84 (272)
T ss_pred EEEcCCcEEEecCCCEEEEecC
Confidence 887776654322 345555544
No 47
>PLN02954 phosphoserine phosphatase
Probab=97.51 E-value=0.00026 Score=69.03 Aligned_cols=100 Identities=14% Similarity=0.165 Sum_probs=57.5
Q ss_pred chhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCcee-----cCCCchhhhhhhhhhcc-ChhHH
Q psy12533 113 QNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPML-----LNPTSLLNAFHTEVIEK-KPQEF 186 (567)
Q Consensus 113 h~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GPll-----lsp~~l~~al~REvi~k-~p~~f 186 (567)
.+|+.++.+.++++|+++.-+|+..... ++..|+. ++++.=.++ +..++...+. +.... ....-
T Consensus 86 ~pg~~e~l~~l~~~g~~~~IvS~~~~~~---i~~~l~~-----~gi~~~~~~~~~~~~~~~g~~~g~--~~~~~~~~~~~ 155 (224)
T PLN02954 86 SPGIPELVKKLRARGTDVYLVSGGFRQM---IAPVAAI-----LGIPPENIFANQILFGDSGEYAGF--DENEPTSRSGG 155 (224)
T ss_pred CccHHHHHHHHHHCCCEEEEECCCcHHH---HHHHHHH-----hCCChhhEEEeEEEEcCCCcEECc--cCCCcccCCcc
Confidence 3699999999999999999999966443 4445555 455421222 1112111110 00000 00112
Q ss_pred HHHHHHHHHHhCCCCCCCEEEecCCcccchhhhhhcCCC
Q psy12533 187 KISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIP 225 (567)
Q Consensus 187 Ki~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp 225 (567)
|-++++.++...+. . -...+|+..+|+.|-++.|+.
T Consensus 156 K~~~i~~~~~~~~~--~-~~i~iGDs~~Di~aa~~~~~~ 191 (224)
T PLN02954 156 KAEAVQHIKKKHGY--K-TMVMIGDGATDLEARKPGGAD 191 (224)
T ss_pred HHHHHHHHHHHcCC--C-ceEEEeCCHHHHHhhhcCCCC
Confidence 66676766665432 1 256789999999996665654
No 48
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=97.51 E-value=0.0012 Score=62.91 Aligned_cols=128 Identities=15% Similarity=0.201 Sum_probs=72.8
Q ss_pred CeEEEEecCCccccCCcccccccccCcCC-cchhHHHHHHHHHHCCceEEEEccCcc-c-------chHHHHHHHHh-cc
Q psy12533 358 DKIVISDIDGTITKSDVLGHVLPIMGKDW-AQNGVTRLFTKIKENGYKLLYLSARAI-G-------QSRVTREYLQS-VK 427 (567)
Q Consensus 358 ~kiVIsDIDGTiTkSD~~G~~~~~~GkDw-~h~Gva~l~~~i~~nGY~iiYLSaRpi-~-------qa~~Tr~~L~~-~~ 427 (567)
-|++++|-||||...- ..+.-.+ ..| ..+|+.++.+.++++||++.-+|..+- . +.+..++++.. ++
T Consensus 3 ~~~~~~d~~~t~~~~~--~~~~~~~-~~~~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~ 79 (181)
T PRK08942 3 MKAIFLDRDGVINVDS--DGYVKSP-DEWIPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLA 79 (181)
T ss_pred ccEEEEECCCCcccCC--ccccCCH-HHeEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHH
Confidence 4899999999996652 1222111 234 688999999999999999999998752 1 11122344432 22
Q ss_pred cCCccCCCCceecCCCchhhhhhhhhh--ccChhHHHHHHHHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCC
Q psy12533 428 QEDLTLPEGPMLLNPTSLLNAFHTEVI--EKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIP 500 (567)
Q Consensus 428 Q~~~~lP~GPvl~spd~l~~al~rEvi--~k~p~~fK~~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp 500 (567)
. .++.--.++.+.+.- ..++. .++|+.|...+ +.+.. ++ .. ..-+|++.+|+.+-+++|+.
T Consensus 80 ~--~g~~f~~i~~~~~~~----~~~~~~~KP~p~~~~~~~-~~l~~--~~-~~--~~~VgDs~~Di~~A~~aG~~ 142 (181)
T PRK08942 80 D--RGGRLDGIYYCPHHP----EDGCDCRKPKPGMLLSIA-ERLNI--DL-AG--SPMVGDSLRDLQAAAAAGVT 142 (181)
T ss_pred H--cCCccceEEECCCCC----CCCCcCCCCCHHHHHHHH-HHcCC--Ch-hh--EEEEeCCHHHHHHHHHCCCe
Confidence 2 233211233322110 01112 33456665443 22211 11 22 34589999999999999993
No 49
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=97.50 E-value=0.00033 Score=67.63 Aligned_cols=110 Identities=18% Similarity=0.318 Sum_probs=67.1
Q ss_pred CCeEEEEecCCccccCCc----ccccccccCcCCcc-hhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCc
Q psy12533 357 NDKIVISDIDGTITKSDV----LGHVLPIMGKDWAQ-NGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDL 431 (567)
Q Consensus 357 ~~kiVIsDIDGTiTkSD~----~G~~~~~~GkDw~h-~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~ 431 (567)
.-|+|++|||||||...+ .|+-+ +.|.. .| ...+.++++|+++..+|+|+... ++..++. .
T Consensus 20 ~ikli~~D~Dgtl~~~~i~~~~~~~~~----~~~~~~d~--~~i~~L~~~Gi~v~I~T~~~~~~---v~~~l~~-----l 85 (183)
T PRK09484 20 NIRLLICDVDGVFSDGLIYMGNNGEEL----KAFNVRDG--YGIRCLLTSGIEVAIITGRKSKL---VEDRMTT-----L 85 (183)
T ss_pred CceEEEEcCCeeeecCEEEEcCCCCEE----EEEeccch--HHHHHHHHCCCEEEEEeCCCcHH---HHHHHHH-----c
Confidence 578899999999998632 01111 12222 11 23445678999999999996644 4667766 4
Q ss_pred cCCCCceecCCCchhhhhhhhhhccChhHHHHHHHHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCC
Q psy12533 432 TLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIP 500 (567)
Q Consensus 432 ~lP~GPvl~spd~l~~al~rEvi~k~p~~fK~~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp 500 (567)
+++. + |.+ ... |.+.++.+..-+.-...- .+.+|+..+|+.+-+.+|++
T Consensus 86 gl~~---~------f~g-----~~~-----k~~~l~~~~~~~gl~~~e-v~~VGDs~~D~~~a~~aG~~ 134 (183)
T PRK09484 86 GITH---L------YQG-----QSN-----KLIAFSDLLEKLAIAPEQ-VAYIGDDLIDWPVMEKVGLS 134 (183)
T ss_pred CCce---e------ecC-----CCc-----HHHHHHHHHHHhCCCHHH-EEEECCCHHHHHHHHHCCCe
Confidence 4431 1 111 012 344455544433322222 56899999999999999996
No 50
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=97.49 E-value=0.00025 Score=69.23 Aligned_cols=68 Identities=19% Similarity=0.346 Sum_probs=50.6
Q ss_pred eEEEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCce
Q psy12533 359 KIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPM 438 (567)
Q Consensus 359 kiVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GPv 438 (567)
|+|++|+||||..++. -.++...+..++++++|++++.+|||+.... +.++.. .++ .+|+
T Consensus 2 k~v~~DlDGTLl~~~~-----------~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~---~~~~~~-----l~~-~~~~ 61 (215)
T TIGR01487 2 KLVAIDIDGTLTEPNR-----------MISERAIEAIRKAEKKGIPVSLVTGNTVPFA---RALAVL-----IGT-SGPV 61 (215)
T ss_pred cEEEEecCCCcCCCCc-----------ccCHHHHHHHHHHHHCCCEEEEEcCCcchhH---HHHHHH-----hCC-CCcE
Confidence 7899999999997641 2567889999999999999999999988654 555555 333 3566
Q ss_pred ecCCCchh
Q psy12533 439 LLNPTSLL 446 (567)
Q Consensus 439 l~spd~l~ 446 (567)
++....+.
T Consensus 62 i~~NGa~i 69 (215)
T TIGR01487 62 VAENGGVI 69 (215)
T ss_pred EEccCcEE
Confidence 66555443
No 51
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=97.49 E-value=0.00055 Score=65.04 Aligned_cols=106 Identities=15% Similarity=0.233 Sum_probs=61.8
Q ss_pred chhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCC--Cceec-------CCCchhhhhhhhhhccCh
Q psy12533 113 QNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPE--GPMLL-------NPTSLLNAFHTEVIEKKP 183 (567)
Q Consensus 113 h~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~--GPlll-------sp~~l~~al~REvi~k~p 183 (567)
.+|+.++...++++||++..+|+...... +..++. .++.. +-.+. .|+... .....
T Consensus 82 ~~g~~e~l~~l~~~g~~~~IvS~~~~~~~---~~~l~~-----~g~~~~~~~~~~~~~~g~~~p~~~~------~~~~~- 146 (201)
T TIGR01491 82 RDYAEELVRWLKEKGLKTAIVSGGIMCLA---KKVAEK-----LNPDYVYSNELVFDEKGFIQPDGIV------RVTFD- 146 (201)
T ss_pred CccHHHHHHHHHHCCCEEEEEeCCcHHHH---HHHHHH-----hCCCeEEEEEEEEcCCCeEecceee------EEccc-
Confidence 35888899999999999999999765444 444443 11110 00000 011100 00001
Q ss_pred hHHHHHHHHHHHHhCCCCCCCEEEecCCcccchhhhhhcCCCCCCEEEEcCCCceec
Q psy12533 184 QEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLSRIFTINSRGEVKH 240 (567)
Q Consensus 184 ~~fKi~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~~rIF~In~~g~~~~ 240 (567)
-|.+.++.++..+.-...- ...+|++.+|+.+-+.+|++ |.+|+++.+..
T Consensus 147 --~k~~~~~~~~~~~~~~~~~-~i~iGDs~~D~~~a~~ag~~----~a~~~~~~~~~ 196 (201)
T TIGR01491 147 --NKGEAVERLKRELNPSLTE-TVAVGDSKNDLPMFEVADIS----ISLGDEGHADY 196 (201)
T ss_pred --cHHHHHHHHHHHhCCCHHH-EEEEcCCHhHHHHHHhcCCe----EEECCCccchh
Confidence 1445555554443211111 45778999999999999984 78999887743
No 52
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=97.48 E-value=0.00063 Score=64.64 Aligned_cols=106 Identities=15% Similarity=0.239 Sum_probs=62.4
Q ss_pred chhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCC--Cceec-------CCCchhhhhhhhhhccCh
Q psy12533 388 QNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPE--GPMLL-------NPTSLLNAFHTEVIEKKP 458 (567)
Q Consensus 388 h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~--GPvl~-------spd~l~~al~rEvi~k~p 458 (567)
.+|+.++...++++||++..+|+...... +..++. .++.. +-.+. .|+... .....+
T Consensus 82 ~~g~~e~l~~l~~~g~~~~IvS~~~~~~~---~~~l~~-----~g~~~~~~~~~~~~~~g~~~p~~~~------~~~~~~ 147 (201)
T TIGR01491 82 RDYAEELVRWLKEKGLKTAIVSGGIMCLA---KKVAEK-----LNPDYVYSNELVFDEKGFIQPDGIV------RVTFDN 147 (201)
T ss_pred CccHHHHHHHHHHCCCEEEEEeCCcHHHH---HHHHHH-----hCCCeEEEEEEEEcCCCeEecceee------EEcccc
Confidence 56888999999999999999999865544 444444 22211 00000 011100 000111
Q ss_pred hHHHHHHHHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCCCCCEEEEcCCCcccc
Q psy12533 459 QEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLSRIFTINSRGEVKH 515 (567)
Q Consensus 459 ~~fK~~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~~rIF~In~~g~~~~ 515 (567)
|.+.++.++..+...... ...+|++.+|+.+-+++|++ |.+|+.+.+..
T Consensus 148 ---k~~~~~~~~~~~~~~~~~-~i~iGDs~~D~~~a~~ag~~----~a~~~~~~~~~ 196 (201)
T TIGR01491 148 ---KGEAVERLKRELNPSLTE-TVAVGDSKNDLPMFEVADIS----ISLGDEGHADY 196 (201)
T ss_pred ---HHHHHHHHHHHhCCCHHH-EEEEcCCHhHHHHHHhcCCe----EEECCCccchh
Confidence 444455544432211112 35789999999999999994 68999888744
No 53
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=97.48 E-value=0.00021 Score=72.21 Aligned_cols=80 Identities=15% Similarity=0.322 Sum_probs=57.0
Q ss_pred eEEEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCce
Q psy12533 359 KIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPM 438 (567)
Q Consensus 359 kiVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GPv 438 (567)
|+|++|+||||..++- ...+-..+..++++++|.+|+..|||+...+ +.+++. .+++ +|+
T Consensus 3 kli~~DlDGTLl~~~~-----------~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~---~~~~~~-----l~~~-~~~ 62 (272)
T PRK15126 3 RLAAFDMDGTLLMPDH-----------HLGEKTLSTLARLRERDITLTFATGRHVLEM---QHILGA-----LSLD-AYL 62 (272)
T ss_pred cEEEEeCCCcCcCCCC-----------cCCHHHHHHHHHHHHCCCEEEEECCCCHHHH---HHHHHH-----cCCC-CcE
Confidence 7899999999998751 2355678889999999999999999998754 677766 4443 677
Q ss_pred ecCCCchhhhhhhhhhccCh
Q psy12533 439 LLNPTSLLNAFHTEVIEKKP 458 (567)
Q Consensus 439 l~spd~l~~al~rEvi~k~p 458 (567)
+++...+.--...+++..++
T Consensus 63 I~~NGa~I~~~~~~~l~~~~ 82 (272)
T PRK15126 63 ITGNGTRVHSLEGELLHRQD 82 (272)
T ss_pred EecCCcEEEcCCCCEEEeec
Confidence 77666554212334444333
No 54
>PRK10976 putative hydrolase; Provisional
Probab=97.47 E-value=0.00036 Score=70.07 Aligned_cols=68 Identities=16% Similarity=0.278 Sum_probs=50.9
Q ss_pred cEEEEecCCccccCCccccccccccccccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCce
Q psy12533 84 KIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPM 163 (567)
Q Consensus 84 kiVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GPl 163 (567)
|+|++|+||||..++- . ..+...+..++++++|++|+.+|||+.... +.+++. .++ .+|+
T Consensus 3 kli~~DlDGTLl~~~~--~---------is~~~~~ai~~l~~~G~~~~iaTGR~~~~~---~~~~~~-----l~~-~~~~ 62 (266)
T PRK10976 3 QVVASDLDGTLLSPDH--T---------LSPYAKETLKLLTARGIHFVFATGRHHVDV---GQIRDN-----LEI-KSYM 62 (266)
T ss_pred eEEEEeCCCCCcCCCC--c---------CCHHHHHHHHHHHHCCCEEEEEcCCChHHH---HHHHHh-----cCC-CCeE
Confidence 7899999999998752 1 234467889999999999999999998754 566666 344 3677
Q ss_pred ecCCCchh
Q psy12533 164 LLNPTSLL 171 (567)
Q Consensus 164 llsp~~l~ 171 (567)
++....+.
T Consensus 63 I~~NGa~i 70 (266)
T PRK10976 63 ITSNGARV 70 (266)
T ss_pred EEcCCcEE
Confidence 76665543
No 55
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=97.47 E-value=0.00062 Score=64.88 Aligned_cols=130 Identities=20% Similarity=0.229 Sum_probs=75.0
Q ss_pred CeEEEEecCCccccCCcccccccccCcCC-cchhHHHHHHHHHHCCceEEEEccCcc------------cchHHHHHHHH
Q psy12533 358 DKIVISDIDGTITKSDVLGHVLPIMGKDW-AQNGVTRLFTKIKENGYKLLYLSARAI------------GQSRVTREYLQ 424 (567)
Q Consensus 358 ~kiVIsDIDGTiTkSD~~G~~~~~~GkDw-~h~Gva~l~~~i~~nGY~iiYLSaRpi------------~qa~~Tr~~L~ 424 (567)
.|++.||-||||+..- -+++....-.+| .-+||.++.+.++++||++.-+|.-+. .....++..|.
T Consensus 1 ~~~~~~d~dg~l~~~~-~~~~~~~~~~~~~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~ 79 (161)
T TIGR01261 1 QKILFIDRDGTLIEEP-PSDFQVDALEKLRFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFR 79 (161)
T ss_pred CCEEEEeCCCCccccC-CCccccCCHHHeeECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHH
Confidence 4789999999999842 123332222233 678999999999999999999998531 12234455555
Q ss_pred hcccCCccCCCCceecCCCchhhhhhhhhhccChhHHHHHHHHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCCC
Q psy12533 425 SVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPL 501 (567)
Q Consensus 425 ~~~Q~~~~lP~GPvl~spd~l~~al~rEvi~k~p~~fK~~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~ 501 (567)
. ++++-=-++.+|... .-++-.++| |.+.+..+...+.-.... ..-+|++.+|+.+=+++|+..
T Consensus 80 ~-----~gl~fd~ii~~~~~~----~~~~~~~KP---~~~~~~~~~~~~~~~~~e-~l~IGD~~~Di~~A~~aGi~~ 143 (161)
T TIGR01261 80 S-----QGIIFDDVLICPHFP----DDNCDCRKP---KIKLLEPYLKKNLIDKAR-SYVIGDRETDMQLAENLGIRG 143 (161)
T ss_pred H-----CCCceeEEEECCCCC----CCCCCCCCC---CHHHHHHHHHHcCCCHHH-eEEEeCCHHHHHHHHHCCCeE
Confidence 5 555411122232100 012223355 223333333322211111 235778899999999999974
No 56
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=97.46 E-value=0.00022 Score=69.33 Aligned_cols=103 Identities=19% Similarity=0.276 Sum_probs=58.1
Q ss_pred chhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecC----CCchhhh-hhhhhhc--cChhH
Q psy12533 388 QNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLN----PTSLLNA-FHTEVIE--KKPQE 460 (567)
Q Consensus 388 h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GPvl~s----pd~l~~a-l~rEvi~--k~p~~ 460 (567)
.+|+.++++.++++||++.-+|+-.. ...+..++. .+++. ++.+ .++.+.+ ...+... .+|+.
T Consensus 87 ~~g~~~~l~~l~~~g~~~~IvS~~~~---~~~~~~l~~-----~~i~~--~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~ 156 (219)
T TIGR00338 87 TEGAEELVKTLKEKGYKVAVISGGFD---LFAEHVKDK-----LGLDA--AFANRLEVEDGKLTGLVEGPIVDASYKGKT 156 (219)
T ss_pred CCCHHHHHHHHHHCCCEEEEECCCcH---HHHHHHHHH-----cCCCc--eEeeEEEEECCEEEEEecCcccCCcccHHH
Confidence 56888999999999999999998553 344555555 44442 2210 0111111 0111111 24555
Q ss_pred HHHHHHHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCCCCCEEEEcCC
Q psy12533 461 FKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLSRIFTINSR 510 (567)
Q Consensus 461 fK~~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~~rIF~In~~ 510 (567)
|+.. ...+.-...- ...+|+..+|+.+-+++|++ +.+|+.
T Consensus 157 ~~~~-----~~~~~~~~~~-~i~iGDs~~Di~aa~~ag~~----i~~~~~ 196 (219)
T TIGR00338 157 LLIL-----LRKEGISPEN-TVAVGDGANDLSMIKAAGLG----IAFNAK 196 (219)
T ss_pred HHHH-----HHHcCCCHHH-EEEEECCHHHHHHHHhCCCe----EEeCCC
Confidence 5433 2222111112 23478889999999999997 366765
No 57
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=97.45 E-value=0.001 Score=63.37 Aligned_cols=132 Identities=17% Similarity=0.204 Sum_probs=74.4
Q ss_pred eEEEEecCCccccCCcccccccccCcCC-cchhHHHHHHHHHHCCceEEEEccCcc-c-------chHHHHHHHHhcccC
Q psy12533 359 KIVISDIDGTITKSDVLGHVLPIMGKDW-AQNGVTRLFTKIKENGYKLLYLSARAI-G-------QSRVTREYLQSVKQE 429 (567)
Q Consensus 359 kiVIsDIDGTiTkSD~~G~~~~~~GkDw-~h~Gva~l~~~i~~nGY~iiYLSaRpi-~-------qa~~Tr~~L~~~~Q~ 429 (567)
|++.+|.||||++.. ++. .-..+| .-|||.++...++++||++.-+|+-+. + ..+..+.++.++-+.
T Consensus 2 ~~~~~D~Dgtl~~~~---~~~-~~~~~~~~~pgv~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~~~~~~~~~l~~ 77 (176)
T TIGR00213 2 KAIFLDRDGTINIDH---GYV-HEIDNFEFIDGVIDALRELKKMGYALVLVTNQSGIARGYFTEAQFEQLTEWMDWSLAE 77 (176)
T ss_pred CEEEEeCCCCEeCCC---CCC-CCHHHeEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHH
Confidence 789999999999531 221 112355 568999999999999999999998763 1 122334555442221
Q ss_pred CccCCCCceecCCCchhh--hhhhhhh--ccChhHHHHHHHHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCCC
Q psy12533 430 DLTLPEGPMLLNPTSLLN--AFHTEVI--EKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPL 501 (567)
Q Consensus 430 ~~~lP~GPvl~spd~l~~--al~rEvi--~k~p~~fK~~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~ 501 (567)
.+++.--++.++..-.. -+..+.. .++|+.|+.++ +.+ .-...- ...+|++.+|+.+=+++|++.
T Consensus 78 -~~~~~~~i~~~~~~~~~~~~~~~~~~~~KP~p~~~~~a~-~~~----~~~~~~-~v~VGDs~~Di~aA~~aG~~~ 146 (176)
T TIGR00213 78 -RDVDLDGIYYCPHHPEGVEEFRQVCDCRKPKPGMLLQAR-KEL----HIDMAQ-SYMVGDKLEDMQAGVAAKVKT 146 (176)
T ss_pred -cCCCccEEEECCCCCcccccccCCCCCCCCCHHHHHHHH-HHc----CcChhh-EEEEcCCHHHHHHHHHCCCcE
Confidence 22221112222211000 0001111 34556666543 222 111122 235899999999999999974
No 58
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=97.40 E-value=0.00018 Score=69.38 Aligned_cols=89 Identities=20% Similarity=0.399 Sum_probs=57.7
Q ss_pred EEEecCCccccCCccccccccccccccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceec
Q psy12533 86 VISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLL 165 (567)
Q Consensus 86 VISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GPlll 165 (567)
|+|||||||..++ +. ..+-..+..+.++++|++++.+|||+.... +.++.. .+++ .|+++
T Consensus 1 i~~DlDGTLl~~~----------~~-i~~~~~~al~~l~~~g~~~~i~TGR~~~~~---~~~~~~-----~~~~-~~~I~ 60 (254)
T PF08282_consen 1 IFSDLDGTLLNSD----------GK-ISPETIEALKELQEKGIKLVIATGRSYSSI---KRLLKE-----LGID-DYFIC 60 (254)
T ss_dssp EEEECCTTTCSTT----------SS-SCHHHHHHHHHHHHTTCEEEEECSSTHHHH---HHHHHH-----TTHC-SEEEE
T ss_pred cEEEECCceecCC----------Ce-eCHHHHHHHHhhcccceEEEEEccCccccc---cccccc-----ccch-hhhcc
Confidence 7899999999875 22 346788889999999999999999998765 555555 3343 66666
Q ss_pred CCCchhhhhhhhhhccChhHHHHHHHHHHHH
Q psy12533 166 NPTSLLNAFHTEVIEKKPQEFKISCLRDIMA 196 (567)
Q Consensus 166 sp~~l~~al~REvi~k~p~~fKi~~L~~i~~ 196 (567)
....+..--..+++...+ ++.+.+..|..
T Consensus 61 ~nGa~i~~~~~~~l~~~~--i~~~~~~~i~~ 89 (254)
T PF08282_consen 61 SNGALIDDPKGKILYEKP--IDSDDVKKILK 89 (254)
T ss_dssp GGGTEEEETTTEEEEEES--B-HHHHHHHHH
T ss_pred cccceeeecccccchhhh--eeccchhheee
Confidence 665544122344443322 34444444433
No 59
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=97.39 E-value=0.00026 Score=68.81 Aligned_cols=105 Identities=19% Similarity=0.261 Sum_probs=56.9
Q ss_pred chhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCC----Cchhhh-hhhhhhccChhHHH
Q psy12533 113 QNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNP----TSLLNA-FHTEVIEKKPQEFK 187 (567)
Q Consensus 113 h~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GPlllsp----~~l~~a-l~REvi~k~p~~fK 187 (567)
.+|+.++.+.++++|+++.-+|+.. ....+..++. .+++. ++.+. ++.+.+ ...+.....| |
T Consensus 87 ~~g~~~~l~~l~~~g~~~~IvS~~~---~~~~~~~l~~-----~~i~~--~~~~~~~~~~~~~~~~~~~~~~~~~~---k 153 (219)
T TIGR00338 87 TEGAEELVKTLKEKGYKVAVISGGF---DLFAEHVKDK-----LGLDA--AFANRLEVEDGKLTGLVEGPIVDASY---K 153 (219)
T ss_pred CCCHHHHHHHHHHCCCEEEEECCCc---HHHHHHHHHH-----cCCCc--eEeeEEEEECCEEEEEecCcccCCcc---c
Confidence 3588889999999999999999954 3444555555 34432 22110 111100 0001111111 3
Q ss_pred HHHHHHHHHhCCCCCCCEEEecCCcccchhhhhhcCCCCCCEEEEcCC
Q psy12533 188 ISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLSRIFTINSR 235 (567)
Q Consensus 188 i~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~~rIF~In~~ 235 (567)
.+.++.+...+.-...- ...+|+..+|+.+-+++|++ +.+|+.
T Consensus 154 ~~~~~~~~~~~~~~~~~-~i~iGDs~~Di~aa~~ag~~----i~~~~~ 196 (219)
T TIGR00338 154 GKTLLILLRKEGISPEN-TVAVGDGANDLSMIKAAGLG----IAFNAK 196 (219)
T ss_pred HHHHHHHHHHcCCCHHH-EEEEECCHHHHHHHHhCCCe----EEeCCC
Confidence 33333333332211111 33478889999999999997 356664
No 60
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=97.38 E-value=0.00041 Score=67.71 Aligned_cols=68 Identities=19% Similarity=0.346 Sum_probs=50.7
Q ss_pred cEEEEecCCccccCCccccccccccccccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCce
Q psy12533 84 KIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPM 163 (567)
Q Consensus 84 kiVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GPl 163 (567)
|+|++|+||||..++. -..+...+..++++++|++|+.+|||+.... +.+++. .++ .+|+
T Consensus 2 k~v~~DlDGTLl~~~~-----------~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~---~~~~~~-----l~~-~~~~ 61 (215)
T TIGR01487 2 KLVAIDIDGTLTEPNR-----------MISERAIEAIRKAEKKGIPVSLVTGNTVPFA---RALAVL-----IGT-SGPV 61 (215)
T ss_pred cEEEEecCCCcCCCCc-----------ccCHHHHHHHHHHHHCCCEEEEEcCCcchhH---HHHHHH-----hCC-CCcE
Confidence 6899999999997641 2456788889999999999999999988654 555554 333 3577
Q ss_pred ecCCCchh
Q psy12533 164 LLNPTSLL 171 (567)
Q Consensus 164 llsp~~l~ 171 (567)
++....+.
T Consensus 62 i~~NGa~i 69 (215)
T TIGR01487 62 VAENGGVI 69 (215)
T ss_pred EEccCcEE
Confidence 77665443
No 61
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=97.37 E-value=0.00046 Score=70.11 Aligned_cols=71 Identities=17% Similarity=0.349 Sum_probs=53.0
Q ss_pred CCeEEEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCC
Q psy12533 357 NDKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEG 436 (567)
Q Consensus 357 ~~kiVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~G 436 (567)
..++|++|+||||..++. ...+-..+..++++++|.+|+-.|||+.... +.+++. .+++..
T Consensus 6 ~~~lI~~DlDGTLL~~~~-----------~i~~~~~~ai~~l~~~Gi~~viaTGR~~~~i---~~~~~~-----l~~~~~ 66 (271)
T PRK03669 6 DPLLIFTDLDGTLLDSHT-----------YDWQPAAPWLTRLREAQVPVILCSSKTAAEM---LPLQQT-----LGLQGL 66 (271)
T ss_pred CCeEEEEeCccCCcCCCC-----------cCcHHHHHHHHHHHHcCCeEEEEcCCCHHHH---HHHHHH-----hCCCCC
Confidence 468899999999997641 1233466788999999999999999998654 667766 455445
Q ss_pred ceecCCCchh
Q psy12533 437 PMLLNPTSLL 446 (567)
Q Consensus 437 Pvl~spd~l~ 446 (567)
|+++...++.
T Consensus 67 ~~I~~NGa~I 76 (271)
T PRK03669 67 PLIAENGAVI 76 (271)
T ss_pred cEEEeCCCEE
Confidence 7777666543
No 62
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=97.36 E-value=0.00042 Score=67.72 Aligned_cols=67 Identities=21% Similarity=0.304 Sum_probs=49.1
Q ss_pred cEEEEecCCccccCCccccccccccccccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCce
Q psy12533 84 KIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPM 163 (567)
Q Consensus 84 kiVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GPl 163 (567)
|+|++|+||||..++. -..+...+..++++++|.+|+.+|||+.... +.++.. .+++ +|+
T Consensus 4 kli~~DlDGTLl~~~~-----------~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~---~~~~~~-----l~~~-~~~ 63 (230)
T PRK01158 4 KAIAIDIDGTITDKDR-----------RLSLKAVEAIRKAEKLGIPVILATGNVLCFA---RAAAKL-----IGTS-GPV 63 (230)
T ss_pred eEEEEecCCCcCCCCC-----------ccCHHHHHHHHHHHHCCCEEEEEcCCchHHH---HHHHHH-----hCCC-CcE
Confidence 7899999999997752 1234567788889999999999999997754 445544 4453 677
Q ss_pred ecCCCch
Q psy12533 164 LLNPTSL 170 (567)
Q Consensus 164 llsp~~l 170 (567)
++....+
T Consensus 64 i~~nGa~ 70 (230)
T PRK01158 64 IAENGGV 70 (230)
T ss_pred EEecCeE
Confidence 7665443
No 63
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=97.34 E-value=0.00061 Score=68.81 Aligned_cols=68 Identities=16% Similarity=0.302 Sum_probs=51.7
Q ss_pred cEEEEecCCccccCCccccccccccccccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCce
Q psy12533 84 KIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPM 163 (567)
Q Consensus 84 kiVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GPl 163 (567)
|+|++|+||||..++. .-.+-..+..++++++|.+|+.+|||+...+ +.+++. .+++ +|+
T Consensus 3 kli~~DlDGTLl~~~~-----------~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~---~~~~~~-----l~~~-~~~ 62 (272)
T PRK15126 3 RLAAFDMDGTLLMPDH-----------HLGEKTLSTLARLRERDITLTFATGRHVLEM---QHILGA-----LSLD-AYL 62 (272)
T ss_pred cEEEEeCCCcCcCCCC-----------cCCHHHHHHHHHHHHCCCEEEEECCCCHHHH---HHHHHH-----cCCC-CcE
Confidence 7899999999998752 1344567888889999999999999998754 677776 4443 677
Q ss_pred ecCCCchh
Q psy12533 164 LLNPTSLL 171 (567)
Q Consensus 164 llsp~~l~ 171 (567)
+++...+.
T Consensus 63 I~~NGa~I 70 (272)
T PRK15126 63 ITGNGTRV 70 (272)
T ss_pred EecCCcEE
Confidence 76665544
No 64
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=97.34 E-value=0.00051 Score=69.00 Aligned_cols=82 Identities=20% Similarity=0.338 Sum_probs=57.2
Q ss_pred CeEEEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccC--CC
Q psy12533 358 DKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTL--PE 435 (567)
Q Consensus 358 ~kiVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~l--P~ 435 (567)
-|+|++|+||||..++. -..+-..+..++++++|++|+..|||+...+ +.+++. .++ |.
T Consensus 3 ~kli~~DlDGTLl~~~~-----------~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~---~~~~~~-----l~~~~~~ 63 (270)
T PRK10513 3 IKLIAIDMDGTLLLPDH-----------TISPAVKQAIAAARAKGVNVVLTTGRPYAGV---HRYLKE-----LHMEQPG 63 (270)
T ss_pred eEEEEEecCCcCcCCCC-----------ccCHHHHHHHHHHHHCCCEEEEecCCChHHH---HHHHHH-----hCCCCCC
Confidence 48899999999998741 1344567889999999999999999998854 667766 333 34
Q ss_pred CceecCCCchhhh-hhhhhhccCh
Q psy12533 436 GPMLLNPTSLLNA-FHTEVIEKKP 458 (567)
Q Consensus 436 GPvl~spd~l~~a-l~rEvi~k~p 458 (567)
++++++...+.-- -..+++..++
T Consensus 64 ~~~I~~NGa~i~~~~~~~~i~~~~ 87 (270)
T PRK10513 64 DYCITNNGALVQKAADGETVAQTA 87 (270)
T ss_pred CeEEEcCCeEEEECCCCCEEEecC
Confidence 5777766655421 1234455444
No 65
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=97.29 E-value=0.00037 Score=70.02 Aligned_cols=80 Identities=23% Similarity=0.395 Sum_probs=59.1
Q ss_pred CcEEEEecCCccccCCccccccccccccccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCc
Q psy12533 83 DKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGP 162 (567)
Q Consensus 83 ~kiVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GP 162 (567)
.|+|++|+||||+.++.. -++-..+..++++++|++++.+|||+... .+.+++.+ ++. ||
T Consensus 3 ~kli~~DlDGTLl~~~~~-----------i~~~~~~al~~~~~~g~~v~iaTGR~~~~---~~~~~~~l-----~~~-~~ 62 (264)
T COG0561 3 IKLLAFDLDGTLLDSNKT-----------ISPETKEALARLREKGVKVVLATGRPLPD---VLSILEEL-----GLD-GP 62 (264)
T ss_pred eeEEEEcCCCCccCCCCc-----------cCHHHHHHHHHHHHCCCEEEEECCCChHH---HHHHHHHc-----CCC-cc
Confidence 478999999999999631 56778888999999999999999999944 47777773 332 37
Q ss_pred eecCCCchhhhhhhhhhccCh
Q psy12533 163 MLLNPTSLLNAFHTEVIEKKP 183 (567)
Q Consensus 163 lllsp~~l~~al~REvi~k~p 183 (567)
+++...++.... -|++.+++
T Consensus 63 ~I~~NGa~i~~~-~~~i~~~~ 82 (264)
T COG0561 63 LITFNGALIYNG-GELLFQKP 82 (264)
T ss_pred EEEeCCeEEecC-CcEEeeec
Confidence 887777665433 34444433
No 66
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=97.28 E-value=0.00055 Score=66.86 Aligned_cols=68 Identities=21% Similarity=0.316 Sum_probs=50.8
Q ss_pred EEEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCcee
Q psy12533 360 IVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPML 439 (567)
Q Consensus 360 iVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GPvl 439 (567)
.|++|+||||+.++. .-..+ ..+..++++++|++++.+|+|+.... +.+++. .+++..|++
T Consensus 1 ~i~~DlDGTLL~~~~----------~~~~~-~~~~l~~l~~~gi~~~i~TgR~~~~~---~~~~~~-----l~~~~~~~I 61 (221)
T TIGR02463 1 WVFSDLDGTLLDSHS----------YDWQP-AAPWLTRLQEAGIPVILCTSKTAAEV---EYLQKA-----LGLTGDPYI 61 (221)
T ss_pred CEEEeCCCCCcCCCC----------CCcHH-HHHHHHHHHHCCCeEEEEcCCCHHHH---HHHHHH-----cCCCCCcEE
Confidence 389999999998751 11233 67899999999999999999998665 556655 445446788
Q ss_pred cCCCchh
Q psy12533 440 LNPTSLL 446 (567)
Q Consensus 440 ~spd~l~ 446 (567)
+...++.
T Consensus 62 ~~NGa~i 68 (221)
T TIGR02463 62 AENGAAI 68 (221)
T ss_pred EeCCcEE
Confidence 7776654
No 67
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=97.27 E-value=0.0012 Score=62.93 Aligned_cols=131 Identities=20% Similarity=0.222 Sum_probs=76.2
Q ss_pred CcEEEEecCCccccCCcccccccccccc-ccchhHHHHHHHHHHCCceEEEEccCcc------------cchHHHHHHHH
Q psy12533 83 DKIVISDIDGTITKSDVLGHVLPIMGKD-WAQNGVTRLFTKIKENGYKLLYLSARAI------------GQSRVTREYLQ 149 (567)
Q Consensus 83 ~kiVISDIDGTITkSD~lG~il~~lGkD-wth~GVa~Ly~~i~~nGY~ilYLSaRpi------------~~a~~Tr~~L~ 149 (567)
.|++.+|.||||+..-. +++....-.+ +.-+||.++...++++||++.-+|.-+- .....+...|.
T Consensus 1 ~~~~~~d~dg~l~~~~~-~~~~~~~~~~~~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~ 79 (161)
T TIGR01261 1 QKILFIDRDGTLIEEPP-SDFQVDALEKLRFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFR 79 (161)
T ss_pred CCEEEEeCCCCccccCC-CccccCCHHHeeECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHH
Confidence 47999999999998422 2332221122 3557999999999999999999998531 12234455555
Q ss_pred hcccCCccCCCCceecCCCchhhhhhhhhhccChhHHHHHHHHHHHHhCCCCCCCEEEecCCcccchhhhhhcCCCCC
Q psy12533 150 SVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLS 227 (567)
Q Consensus 150 ~~~q~~~~LP~GPlllsp~~l~~al~REvi~k~p~~fKi~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~~ 227 (567)
. ++++-=-++.+|... .-++..++| |.+.+..+.+.+.-...- ..-+|++.+|+.+=+++|+..-
T Consensus 80 ~-----~gl~fd~ii~~~~~~----~~~~~~~KP---~~~~~~~~~~~~~~~~~e-~l~IGD~~~Di~~A~~aGi~~i 144 (161)
T TIGR01261 80 S-----QGIIFDDVLICPHFP----DDNCDCRKP---KIKLLEPYLKKNLIDKAR-SYVIGDRETDMQLAENLGIRGI 144 (161)
T ss_pred H-----CCCceeEEEECCCCC----CCCCCCCCC---CHHHHHHHHHHcCCCHHH-eEEEeCCHHHHHHHHHCCCeEE
Confidence 5 555411122232100 012223455 334444444443211111 3356788999999999999754
No 68
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=97.26 E-value=0.003 Score=60.27 Aligned_cols=130 Identities=14% Similarity=0.132 Sum_probs=71.0
Q ss_pred CcEEEEecCCccccCCccccccccccccccchhHHHHHHHHHHCCceEEEEccCcc-c-------chHHHHHHHHhcccC
Q psy12533 83 DKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAI-G-------QSRVTREYLQSVKQE 154 (567)
Q Consensus 83 ~kiVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi-~-------~a~~Tr~~L~~~~q~ 154 (567)
-|++++|-||||..... .+.-....--..+||.++.+.++++||++.-+|..+- . +.+..++++..+-+.
T Consensus 3 ~~~~~~d~~~t~~~~~~--~~~~~~~~~~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~ 80 (181)
T PRK08942 3 MKAIFLDRDGVINVDSD--GYVKSPDEWIPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLAD 80 (181)
T ss_pred ccEEEEECCCCcccCCc--cccCCHHHeEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHH
Confidence 47999999999976531 2211111112567999999999999999999998752 1 111223444322111
Q ss_pred CccCCCCceecCCCchhhhhhhhhhccC--hhHHHHHHHHHHHHhCCCCCCCEEEecCCcccchhhhhhcCCC
Q psy12533 155 DLTLPEGPMLLNPTSLLNAFHTEVIEKK--PQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIP 225 (567)
Q Consensus 155 ~~~LP~GPlllsp~~l~~al~REvi~k~--p~~fKi~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp 225 (567)
.++.--.++.+.+.- ..++...+ |+.|...+ +.+ .. ++ .- ..-+|++..|+.+-+++|+.
T Consensus 81 -~g~~f~~i~~~~~~~----~~~~~~~KP~p~~~~~~~-~~l-~~-~~--~~-~~~VgDs~~Di~~A~~aG~~ 142 (181)
T PRK08942 81 -RGGRLDGIYYCPHHP----EDGCDCRKPKPGMLLSIA-ERL-NI-DL--AG-SPMVGDSLRDLQAAAAAGVT 142 (181)
T ss_pred -cCCccceEEECCCCC----CCCCcCCCCCHHHHHHHH-HHc-CC-Ch--hh-EEEEeCCHHHHHHHHHCCCe
Confidence 233222233332110 01122234 44444333 222 11 11 11 44588999999999999993
No 69
>PF15017 AF1Q: Drug resistance and apoptosis regulator
Probab=97.24 E-value=0.0001 Score=63.96 Aligned_cols=33 Identities=27% Similarity=0.573 Sum_probs=26.4
Q ss_pred hhhcCCCCCCCCCCCCCCCceecCCCCCCCCCC
Q psy12533 532 VDQMFPSSLEGTSSEDFSQFVYWREPICETLPE 564 (567)
Q Consensus 532 vd~~FP~~~~~~~~~~~~~~~~w~~p~~~~~~~ 564 (567)
++..+++........+||+|+|||.|||+|+.+
T Consensus 4 ~~~~~~~~~~~~~~~~f~sF~fWR~PlP~id~~ 36 (87)
T PF15017_consen 4 EDWDKPPPQHDPEDEEFNSFLFWRNPLPDIDLE 36 (87)
T ss_pred ccccCCCccCCcccccccceeeccCCCCCCCHH
Confidence 345666666666788899999999999999764
No 70
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=97.24 E-value=0.00073 Score=65.23 Aligned_cols=108 Identities=19% Similarity=0.339 Sum_probs=67.4
Q ss_pred CCcEEEEecCCccccCCc----cccccccccccccc---hhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccC
Q psy12533 82 NDKIVISDIDGTITKSDV----LGHVLPIMGKDWAQ---NGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQE 154 (567)
Q Consensus 82 ~~kiVISDIDGTITkSD~----lG~il~~lGkDwth---~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~ 154 (567)
.-|+|++|||||||...+ .|+-+ +.|.. .++ +.++++|+++..+|+|+... ++..++.
T Consensus 20 ~ikli~~D~Dgtl~~~~i~~~~~~~~~----~~~~~~d~~~i----~~L~~~Gi~v~I~T~~~~~~---v~~~l~~---- 84 (183)
T PRK09484 20 NIRLLICDVDGVFSDGLIYMGNNGEEL----KAFNVRDGYGI----RCLLTSGIEVAIITGRKSKL---VEDRMTT---- 84 (183)
T ss_pred CceEEEEcCCeeeecCEEEEcCCCCEE----EEEeccchHHH----HHHHHCCCEEEEEeCCCcHH---HHHHHHH----
Confidence 478999999999998642 11111 22322 234 44567999999999996644 4667766
Q ss_pred CccCCCCceecCCCchhhhhhhhhhccChhHHHHHHHHHHHHhCCCCCCCEEEecCCcccchhhhhhcCCC
Q psy12533 155 DLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIP 225 (567)
Q Consensus 155 ~~~LP~GPlllsp~~l~~al~REvi~k~p~~fKi~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp 225 (567)
.+++. +|.+ ... |.+.+..+...+.-...- ++.+|+..+|+.+-+.+|++
T Consensus 85 -lgl~~---------~f~g-----~~~-----k~~~l~~~~~~~gl~~~e-v~~VGDs~~D~~~a~~aG~~ 134 (183)
T PRK09484 85 -LGITH---------LYQG-----QSN-----KLIAFSDLLEKLAIAPEQ-VAYIGDDLIDWPVMEKVGLS 134 (183)
T ss_pred -cCCce---------eecC-----CCc-----HHHHHHHHHHHhCCCHHH-EEEECCCHHHHHHHHHCCCe
Confidence 33431 1111 011 455555555544321222 67899999999999999986
No 71
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=97.23 E-value=0.0015 Score=65.37 Aligned_cols=67 Identities=21% Similarity=0.434 Sum_probs=50.0
Q ss_pred EEEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCcee
Q psy12533 360 IVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPML 439 (567)
Q Consensus 360 iVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GPvl 439 (567)
+|+||+||||..++ + ...+...+.+++++++|++++.+|||+... .+..+.. .++. +|++
T Consensus 1 li~~DlDGTLl~~~----------~-~i~~~~~~~i~~l~~~G~~~~iaTGR~~~~---~~~~~~~-----~~~~-~~~I 60 (256)
T TIGR00099 1 LIFIDLDGTLLNDD----------H-TISPSTKEALAKLREKGIKVVLATGRPYKE---VKNILKE-----LGLD-TPFI 60 (256)
T ss_pred CEEEeCCCCCCCCC----------C-ccCHHHHHHHHHHHHCCCeEEEEeCCCHHH---HHHHHHH-----cCCC-CCEE
Confidence 48999999999763 1 245678899999999999999999999654 3666666 4443 3677
Q ss_pred cCCCchh
Q psy12533 440 LNPTSLL 446 (567)
Q Consensus 440 ~spd~l~ 446 (567)
+...++.
T Consensus 61 ~~NGa~i 67 (256)
T TIGR00099 61 TANGAAV 67 (256)
T ss_pred EcCCcEE
Confidence 6665543
No 72
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=97.22 E-value=0.00078 Score=68.48 Aligned_cols=58 Identities=24% Similarity=0.275 Sum_probs=46.3
Q ss_pred eEEEEecCCccccCCcccccccccCcCC-cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHh
Q psy12533 359 KIVISDIDGTITKSDVLGHVLPIMGKDW-AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQS 425 (567)
Q Consensus 359 kiVIsDIDGTiTkSD~~G~~~~~~GkDw-~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~ 425 (567)
|+|+||+||||..++. +.+ .-||+.+..++++++|++++++|+|+..-.....+.|..
T Consensus 2 k~i~~D~DGtl~~~~~---------~~~~~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~ 60 (257)
T TIGR01458 2 KGVLLDISGVLYISDA---------KSGVAVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQR 60 (257)
T ss_pred CEEEEeCCCeEEeCCC---------cccCcCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHH
Confidence 6899999999997742 223 567999999999999999999999987765555555544
No 73
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=97.21 E-value=0.00084 Score=68.17 Aligned_cols=70 Identities=17% Similarity=0.340 Sum_probs=51.1
Q ss_pred CCcEEEEecCCccccCCccccccccccccccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCC
Q psy12533 82 NDKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEG 161 (567)
Q Consensus 82 ~~kiVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~G 161 (567)
..++|++|+||||+.++. ...+-..+..++++++|.+|+.+|||+.... +.+++. .+++.+
T Consensus 6 ~~~lI~~DlDGTLL~~~~-----------~i~~~~~~ai~~l~~~Gi~~viaTGR~~~~i---~~~~~~-----l~~~~~ 66 (271)
T PRK03669 6 DPLLIFTDLDGTLLDSHT-----------YDWQPAAPWLTRLREAQVPVILCSSKTAAEM---LPLQQT-----LGLQGL 66 (271)
T ss_pred CCeEEEEeCccCCcCCCC-----------cCcHHHHHHHHHHHHcCCeEEEEcCCCHHHH---HHHHHH-----hCCCCC
Confidence 467899999999997642 1223355778889999999999999998654 667766 445445
Q ss_pred ceecCCCch
Q psy12533 162 PMLLNPTSL 170 (567)
Q Consensus 162 Plllsp~~l 170 (567)
|+++...++
T Consensus 67 ~~I~~NGa~ 75 (271)
T PRK03669 67 PLIAENGAV 75 (271)
T ss_pred cEEEeCCCE
Confidence 777666544
No 74
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=97.18 E-value=0.0021 Score=61.20 Aligned_cols=132 Identities=17% Similarity=0.182 Sum_probs=72.3
Q ss_pred cEEEEecCCccccCCccccccccccccc-cchhHHHHHHHHHHCCceEEEEccCcc--------cchHHHHHHHHhcccC
Q psy12533 84 KIVISDIDGTITKSDVLGHVLPIMGKDW-AQNGVTRLFTKIKENGYKLLYLSARAI--------GQSRVTREYLQSVKQE 154 (567)
Q Consensus 84 kiVISDIDGTITkSD~lG~il~~lGkDw-th~GVa~Ly~~i~~nGY~ilYLSaRpi--------~~a~~Tr~~L~~~~q~ 154 (567)
|++.+|.||||++.. ++... ..+| .-+||.++...++++||++.-+|+-+. ...+..+.++.++-+.
T Consensus 2 ~~~~~D~Dgtl~~~~---~~~~~-~~~~~~~pgv~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~~~~~~~~~l~~ 77 (176)
T TIGR00213 2 KAIFLDRDGTINIDH---GYVHE-IDNFEFIDGVIDALRELKKMGYALVLVTNQSGIARGYFTEAQFEQLTEWMDWSLAE 77 (176)
T ss_pred CEEEEeCCCCEeCCC---CCCCC-HHHeEECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHH
Confidence 789999999999531 22111 1233 357999999999999999999998763 1123334555442221
Q ss_pred CccCCCCceecCCCchhhh--hhhhhh--ccChhHHHHHHHHHHHHhCCCCCCCEEEecCCcccchhhhhhcCCCC
Q psy12533 155 DLTLPEGPMLLNPTSLLNA--FHTEVI--EKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPL 226 (567)
Q Consensus 155 ~~~LP~GPlllsp~~l~~a--l~REvi--~k~p~~fKi~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~ 226 (567)
.+++.--++.++..-..+ +..+.. .++|+.|+.++ +.+.-...- ...+|++.+|+.+=+++|++.
T Consensus 78 -~~~~~~~i~~~~~~~~~~~~~~~~~~~~KP~p~~~~~a~-----~~~~~~~~~-~v~VGDs~~Di~aA~~aG~~~ 146 (176)
T TIGR00213 78 -RDVDLDGIYYCPHHPEGVEEFRQVCDCRKPKPGMLLQAR-----KELHIDMAQ-SYMVGDKLEDMQAGVAAKVKT 146 (176)
T ss_pred -cCCCccEEEECCCCCcccccccCCCCCCCCCHHHHHHHH-----HHcCcChhh-EEEEcCCHHHHHHHHHCCCcE
Confidence 222211122222110000 000112 33444454433 222211112 335899999999999999874
No 75
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=97.16 E-value=0.00099 Score=66.67 Aligned_cols=69 Identities=20% Similarity=0.389 Sum_probs=51.5
Q ss_pred CcEEEEecCCccccCCccccccccccccccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCc
Q psy12533 83 DKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGP 162 (567)
Q Consensus 83 ~kiVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GP 162 (567)
-|+|+||+||||..++. . -.+-..+..++++++|++|+.+|||+... ++.+++. .++ .+|
T Consensus 3 ~kli~~DlDGTLl~~~~--~---------i~~~~~~ai~~~~~~G~~~~iaTGR~~~~---~~~~~~~-----l~~-~~~ 62 (272)
T PRK10530 3 YRVIALDLDGTLLTPKK--T---------ILPESLEALARAREAGYKVIIVTGRHHVA---IHPFYQA-----LAL-DTP 62 (272)
T ss_pred ccEEEEeCCCceECCCC--c---------cCHHHHHHHHHHHHCCCEEEEEcCCChHH---HHHHHHh-----cCC-CCC
Confidence 47899999999997752 1 23446788889999999999999999764 4667766 333 367
Q ss_pred eecCCCchh
Q psy12533 163 MLLNPTSLL 171 (567)
Q Consensus 163 lllsp~~l~ 171 (567)
+++....+.
T Consensus 63 ~I~~NGa~i 71 (272)
T PRK10530 63 AICCNGTYL 71 (272)
T ss_pred EEEcCCcEE
Confidence 777776554
No 76
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=97.15 E-value=0.001 Score=66.85 Aligned_cols=72 Identities=19% Similarity=0.358 Sum_probs=51.5
Q ss_pred CcEEEEecCCccccCCccccccccccccccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCc
Q psy12533 83 DKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGP 162 (567)
Q Consensus 83 ~kiVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GP 162 (567)
-|+|++|+||||..++. . ..+-..+..++++++|++|+.+|||+...+ +.+++.+. ...|.+|
T Consensus 3 ~kli~~DlDGTLl~~~~--~---------i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~---~~~~~~l~---~~~~~~~ 65 (270)
T PRK10513 3 IKLIAIDMDGTLLLPDH--T---------ISPAVKQAIAAARAKGVNVVLTTGRPYAGV---HRYLKELH---MEQPGDY 65 (270)
T ss_pred eEEEEEecCCcCcCCCC--c---------cCHHHHHHHHHHHHCCCEEEEecCCChHHH---HHHHHHhC---CCCCCCe
Confidence 37899999999998751 1 233467889999999999999999999754 66776621 1123456
Q ss_pred eecCCCchh
Q psy12533 163 MLLNPTSLL 171 (567)
Q Consensus 163 lllsp~~l~ 171 (567)
+++....+.
T Consensus 66 ~I~~NGa~i 74 (270)
T PRK10513 66 CITNNGALV 74 (270)
T ss_pred EEEcCCeEE
Confidence 776665544
No 77
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=97.14 E-value=0.0033 Score=63.67 Aligned_cols=97 Identities=7% Similarity=0.018 Sum_probs=57.0
Q ss_pred chhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhccChhHHHHHHHH
Q psy12533 388 QNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLR 467 (567)
Q Consensus 388 h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GPvl~spd~l~~al~rEvi~k~p~~fK~~~L~ 467 (567)
.|||.++...++++||++.-+|+.+.... +..|+...- .++..-.++++.+ .. .-.++|+.|..++ +
T Consensus 103 ~pg~~elL~~L~~~g~~l~I~T~~~~~~~---~~~l~~~~l--~~~~~d~i~~~~~-~~------~~KP~p~~~~~a~-~ 169 (267)
T PRK13478 103 IPGVLEVIAALRARGIKIGSTTGYTREMM---DVVVPLAAA--QGYRPDHVVTTDD-VP------AGRPYPWMALKNA-I 169 (267)
T ss_pred CCCHHHHHHHHHHCCCEEEEEcCCcHHHH---HHHHHHHhh--cCCCceEEEcCCc-CC------CCCCChHHHHHHH-H
Confidence 56899999999999999999998766443 444443211 1221123333322 11 1134556665433 2
Q ss_pred HHHhhCCCCCCCEEEecCCCcccHHhHHHcCCCC
Q psy12533 468 DIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPL 501 (567)
Q Consensus 468 ~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~ 501 (567)
.+ .+-++ .. ..-+|++.+|+.+=+++|++.
T Consensus 170 ~l-~~~~~-~e--~l~IGDs~~Di~aA~~aG~~~ 199 (267)
T PRK13478 170 EL-GVYDV-AA--CVKVDDTVPGIEEGLNAGMWT 199 (267)
T ss_pred Hc-CCCCC-cc--eEEEcCcHHHHHHHHHCCCEE
Confidence 21 11011 11 346899999999999999964
No 78
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=97.13 E-value=0.00084 Score=65.30 Aligned_cols=64 Identities=19% Similarity=0.351 Sum_probs=46.3
Q ss_pred EEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceec
Q psy12533 361 VISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLL 440 (567)
Q Consensus 361 VIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GPvl~ 440 (567)
|+||+||||..++. -..+-..+..++++++|++|+.+|||+.... +.++.. .++| .|+++
T Consensus 1 i~~DlDGTLl~~~~-----------~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~---~~~~~~-----l~~~-~~~i~ 60 (225)
T TIGR01482 1 IASDIDGTLTDPNR-----------AINESALEAIRKAESVGIPVVLVTGNSVQFA---RALAKL-----IGTP-DPVIA 60 (225)
T ss_pred CeEeccCccCCCCc-----------ccCHHHHHHHHHHHHCCCEEEEEcCCchHHH---HHHHHH-----hCCC-CeEEE
Confidence 58999999998751 1345567888999999999999999998766 445555 3333 45665
Q ss_pred CCCc
Q psy12533 441 NPTS 444 (567)
Q Consensus 441 spd~ 444 (567)
...+
T Consensus 61 ~nGa 64 (225)
T TIGR01482 61 ENGG 64 (225)
T ss_pred ecCc
Confidence 5443
No 79
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=97.12 E-value=0.0011 Score=67.36 Aligned_cols=62 Identities=24% Similarity=0.280 Sum_probs=50.9
Q ss_pred cEEEEecCCccccCCccccccccccccc-cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCC
Q psy12533 84 KIVISDIDGTITKSDVLGHVLPIMGKDW-AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLP 159 (567)
Q Consensus 84 kiVISDIDGTITkSD~lG~il~~lGkDw-th~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP 159 (567)
|+|+||+||||..++. +.+ .-+|+.+..++++++|++++++|+|+..-.+...+.|.. .++|
T Consensus 2 k~i~~D~DGtl~~~~~---------~~~~~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~-----~g~~ 64 (257)
T TIGR01458 2 KGVLLDISGVLYISDA---------KSGVAVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQR-----LGFD 64 (257)
T ss_pred CEEEEeCCCeEEeCCC---------cccCcCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHH-----cCCC
Confidence 6899999999998752 222 467999999999999999999999998877777777766 5565
No 80
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=97.11 E-value=0.001 Score=64.98 Aligned_cols=68 Identities=22% Similarity=0.367 Sum_probs=49.2
Q ss_pred EEEEecCCccccCCccccccccccccccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCcee
Q psy12533 85 IVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPML 164 (567)
Q Consensus 85 iVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GPll 164 (567)
.|++|+||||+.++. .. ..+ ..+..++++++|++++.+|+|+.... +.+++. .+++..|++
T Consensus 1 ~i~~DlDGTLL~~~~---------~~-~~~-~~~~l~~l~~~gi~~~i~TgR~~~~~---~~~~~~-----l~~~~~~~I 61 (221)
T TIGR02463 1 WVFSDLDGTLLDSHS---------YD-WQP-AAPWLTRLQEAGIPVILCTSKTAAEV---EYLQKA-----LGLTGDPYI 61 (221)
T ss_pred CEEEeCCCCCcCCCC---------CC-cHH-HHHHHHHHHHCCCeEEEEcCCCHHHH---HHHHHH-----cCCCCCcEE
Confidence 389999999998752 11 223 56888889999999999999998665 556655 445435777
Q ss_pred cCCCchh
Q psy12533 165 LNPTSLL 171 (567)
Q Consensus 165 lsp~~l~ 171 (567)
+...++.
T Consensus 62 ~~NGa~i 68 (221)
T TIGR02463 62 AENGAAI 68 (221)
T ss_pred EeCCcEE
Confidence 7765543
No 81
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=97.10 E-value=0.00087 Score=65.87 Aligned_cols=97 Identities=19% Similarity=0.186 Sum_probs=60.0
Q ss_pred cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhccC--hhH----
Q psy12533 387 AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKK--PQE---- 460 (567)
Q Consensus 387 ~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GPvl~spd~l~~al~rEvi~k~--p~~---- 460 (567)
..||+.+++..++++|+++.-+|+-... .++..|+. + ++.-.++.+. ..+. ..++...+ |+.
T Consensus 75 l~pG~~e~l~~l~~~g~~~~IvS~~~~~---~i~~il~~-----~-~~~~~i~~n~-~~~~--~~~~~~~kp~p~~~~~~ 142 (219)
T PRK09552 75 IREGFHEFVQFVKENNIPFYVVSGGMDF---FVYPLLQG-----L-IPKEQIYCNG-SDFS--GEYITITWPHPCDEHCQ 142 (219)
T ss_pred cCcCHHHHHHHHHHcCCeEEEECCCcHH---HHHHHHHH-----h-CCcCcEEEeE-EEec--CCeeEEeccCCcccccc
Confidence 3679999999999999999999997643 44556655 3 4433333221 1111 00111122 221
Q ss_pred -----HHHHHHHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCC
Q psy12533 461 -----FKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIP 500 (567)
Q Consensus 461 -----fK~~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp 500 (567)
-|..+++.+.. .... ...+|+..+|+.|=+++|+.
T Consensus 143 ~~~~~~K~~~l~~~~~---~~~~--~i~iGDs~~Di~aa~~Ag~~ 182 (219)
T PRK09552 143 NHCGCCKPSLIRKLSD---TNDF--HIVIGDSITDLEAAKQADKV 182 (219)
T ss_pred ccCCCchHHHHHHhcc---CCCC--EEEEeCCHHHHHHHHHCCcc
Confidence 27777777654 1223 35789999999999999993
No 82
>PRK10444 UMP phosphatase; Provisional
Probab=97.10 E-value=0.00078 Score=68.45 Aligned_cols=69 Identities=20% Similarity=0.391 Sum_probs=54.1
Q ss_pred eEEEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCce
Q psy12533 359 KIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPM 438 (567)
Q Consensus 359 kiVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GPv 438 (567)
|.|+||+||||..++ -..||+.+.++.++++|.+++++|.|+-... +.+.+.++.-|..+++.-+
T Consensus 2 ~~v~~DlDGtL~~~~------------~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~---~~~~~~l~~~G~~~~~~~i 66 (248)
T PRK10444 2 KNVICDIDGVLMHDN------------VAVPGAAEFLHRILDKGLPLVLLTNYPSQTG---QDLANRFATAGVDVPDSVF 66 (248)
T ss_pred cEEEEeCCCceEeCC------------eeCccHHHHHHHHHHCCCeEEEEeCCCCCCH---HHHHHHHHHcCCCCCHhhE
Confidence 579999999999874 2478999999999999999999999997665 4455555555666677666
Q ss_pred ecCC
Q psy12533 439 LLNP 442 (567)
Q Consensus 439 l~sp 442 (567)
++|.
T Consensus 67 ~ts~ 70 (248)
T PRK10444 67 YTSA 70 (248)
T ss_pred ecHH
Confidence 6543
No 83
>PF15017 AF1Q: Drug resistance and apoptosis regulator
Probab=97.09 E-value=0.0002 Score=62.19 Aligned_cols=33 Identities=21% Similarity=0.285 Sum_probs=26.4
Q ss_pred hhhcCCCCCCCCCCCcccccccccCcCCCcccc
Q psy12533 257 VDQMFPSSLEGTSSEDFTTMAEILNQIPEITDQ 289 (567)
Q Consensus 257 vd~~fP~~~~~~~~~~~~~~~~w~~~~~~~~~~ 289 (567)
++..+++........+||+|+|||.|||+|+..
T Consensus 4 ~~~~~~~~~~~~~~~~f~sF~fWR~PlP~id~~ 36 (87)
T PF15017_consen 4 EDWDKPPPQHDPEDEEFNSFLFWRNPLPDIDLE 36 (87)
T ss_pred ccccCCCccCCcccccccceeeccCCCCCCCHH
Confidence 345566666666788899999999999999764
No 84
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=97.06 E-value=0.0014 Score=64.45 Aligned_cols=96 Identities=17% Similarity=0.197 Sum_probs=58.9
Q ss_pred chhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhccCh--hH-----
Q psy12533 113 QNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKP--QE----- 185 (567)
Q Consensus 113 h~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GPlllsp~~l~~al~REvi~k~p--~~----- 185 (567)
.+|+.+++..++++|+++.-+|+... ..++..|+. . ++.-.++.+... +.. ..+...+| +.
T Consensus 76 ~pG~~e~l~~l~~~g~~~~IvS~~~~---~~i~~il~~-----~-~~~~~i~~n~~~-~~~--~~~~~~kp~p~~~~~~~ 143 (219)
T PRK09552 76 REGFHEFVQFVKENNIPFYVVSGGMD---FFVYPLLQG-----L-IPKEQIYCNGSD-FSG--EYITITWPHPCDEHCQN 143 (219)
T ss_pred CcCHHHHHHHHHHcCCeEEEECCCcH---HHHHHHHHH-----h-CCcCcEEEeEEE-ecC--CeeEEeccCCccccccc
Confidence 45999999999999999999999653 445566655 3 443333322211 110 01111122 21
Q ss_pred ----HHHHHHHHHHHhCCCCCCCEEEecCCcccchhhhhhcCCC
Q psy12533 186 ----FKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIP 225 (567)
Q Consensus 186 ----fKi~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp 225 (567)
-|..+++.+... + .. ...+|++.+|+.|=+++|+.
T Consensus 144 ~~~~~K~~~l~~~~~~--~-~~--~i~iGDs~~Di~aa~~Ag~~ 182 (219)
T PRK09552 144 HCGCCKPSLIRKLSDT--N-DF--HIVIGDSITDLEAAKQADKV 182 (219)
T ss_pred cCCCchHHHHHHhccC--C-CC--EEEEeCCHHHHHHHHHCCcc
Confidence 267777766432 1 22 45789999999999999983
No 85
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=97.05 E-value=0.0034 Score=63.59 Aligned_cols=96 Identities=7% Similarity=-0.039 Sum_probs=55.4
Q ss_pred chhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhccChhHHHHHHHH
Q psy12533 113 QNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLR 192 (567)
Q Consensus 113 h~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GPlllsp~~l~~al~REvi~k~p~~fKi~~L~ 192 (567)
.+||.++...++++||++.-+|+.+... ++..|+...- ..+..-.++++.+ .. ...++|+.|..++
T Consensus 103 ~pg~~elL~~L~~~g~~l~I~T~~~~~~---~~~~l~~~~l--~~~~~d~i~~~~~-~~------~~KP~p~~~~~a~-- 168 (267)
T PRK13478 103 IPGVLEVIAALRARGIKIGSTTGYTREM---MDVVVPLAAA--QGYRPDHVVTTDD-VP------AGRPYPWMALKNA-- 168 (267)
T ss_pred CCCHHHHHHHHHHCCCEEEEEcCCcHHH---HHHHHHHHhh--cCCCceEEEcCCc-CC------CCCCChHHHHHHH--
Confidence 4588899999999999999999866543 3445543211 1221122333322 11 0133444444332
Q ss_pred HHHHhCCCC-CCCEEEecCCcccchhhhhhcCCCC
Q psy12533 193 DIMALFPPN-TQPFYAGYGNKVNDVWSYQAVGIPL 226 (567)
Q Consensus 193 ~i~~lf~~~-~~pf~agfGNr~tDv~aY~~vGIp~ 226 (567)
..+.-. .. =..-+|++.+|+.+=+++|++.
T Consensus 169 ---~~l~~~~~~-e~l~IGDs~~Di~aA~~aG~~~ 199 (267)
T PRK13478 169 ---IELGVYDVA-ACVKVDDTVPGIEEGLNAGMWT 199 (267)
T ss_pred ---HHcCCCCCc-ceEEEcCcHHHHHHHHHCCCEE
Confidence 222110 01 1457889999999999999964
No 86
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=97.05 E-value=0.0013 Score=66.80 Aligned_cols=68 Identities=16% Similarity=0.356 Sum_probs=50.8
Q ss_pred CeEEEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCc
Q psy12533 358 DKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGP 437 (567)
Q Consensus 358 ~kiVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GP 437 (567)
-|+|++||||||..++. -..+++.+..++++++|++++-+|+|+.... +..+.. .+++ .|
T Consensus 4 ~kli~~DlDGTLl~~~~-----------~~~~~~~~ai~~l~~~Gi~~~iaTgR~~~~~---~~~~~~-----l~l~-~~ 63 (273)
T PRK00192 4 KLLVFTDLDGTLLDHHT-----------YSYEPAKPALKALKEKGIPVIPCTSKTAAEV---EVLRKE-----LGLE-DP 63 (273)
T ss_pred ceEEEEcCcccCcCCCC-----------cCcHHHHHHHHHHHHCCCEEEEEcCCCHHHH---HHHHHH-----cCCC-CC
Confidence 57899999999998641 2356788999999999999999999987554 555555 4454 35
Q ss_pred eecCCCch
Q psy12533 438 MLLNPTSL 445 (567)
Q Consensus 438 vl~spd~l 445 (567)
+++...++
T Consensus 64 ~i~~nGa~ 71 (273)
T PRK00192 64 FIVENGAA 71 (273)
T ss_pred EEEEcCcE
Confidence 66555544
No 87
>PRK08238 hypothetical protein; Validated
Probab=97.01 E-value=0.0031 Score=70.14 Aligned_cols=130 Identities=20% Similarity=0.245 Sum_probs=84.1
Q ss_pred CCeEEEEecCCccccCCcccc------------------------------cccccCcCC----cchhHHHHHHHHHHCC
Q psy12533 357 NDKIVISDIDGTITKSDVLGH------------------------------VLPIMGKDW----AQNGVTRLFTKIKENG 402 (567)
Q Consensus 357 ~~kiVIsDIDGTiTkSD~~G~------------------------------~~~~~GkDw----~h~Gva~l~~~i~~nG 402 (567)
.....|+|+|||++++|.+-- +...++-|. -++|+.++.+..+++|
T Consensus 9 ~~~pl~~DlDgTLi~td~l~e~~~~~l~~~p~~~~~l~~~~~~g~a~lK~~~a~~~~~d~~~lp~~pga~e~L~~lk~~G 88 (479)
T PRK08238 9 RDLPLVVDLDGTLIRTDLLHESIFALLRRNPLALLRLPLWLLRGKAALKRRLARRVDLDVATLPYNEEVLDYLRAERAAG 88 (479)
T ss_pred CCCCEEEeCCCCccccchHHHHHHHHHHhChHHHHHHHHHHHhcHHHHHHHHHhhcCCChhhCCCChhHHHHHHHHHHCC
Confidence 345689999999999998431 111123332 4689999999999999
Q ss_pred ceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhccChhHHHHHHHHHHHhhCCCCCCCEEE
Q psy12533 403 YKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYA 482 (567)
Q Consensus 403 Y~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GPvl~spd~l~~al~rEvi~k~p~~fK~~~L~~i~~lf~~~~~pf~a 482 (567)
+++.-+|+.+...++...+ . .++ --.++.+.+. ...+|+. |.+.+. +.++.+. + .
T Consensus 89 ~~v~LaTas~~~~a~~i~~---~-----lGl-Fd~Vigsd~~---------~~~kg~~-K~~~l~---~~l~~~~--~-~ 143 (479)
T PRK08238 89 RKLVLATASDERLAQAVAA---H-----LGL-FDGVFASDGT---------TNLKGAA-KAAALV---EAFGERG--F-D 143 (479)
T ss_pred CEEEEEeCCCHHHHHHHHH---H-----cCC-CCEEEeCCCc---------cccCCch-HHHHHH---HHhCccC--e-e
Confidence 9999999998876654433 3 222 1124433321 1233433 555544 3333322 2 2
Q ss_pred ecCCCcccHHhHHHcCCCCCCEEEEcCCCcccc
Q psy12533 483 GYGNKVNDVWSYQAVGIPLSRIFTINSRGEVKH 515 (567)
Q Consensus 483 gfGNr~tDv~aY~~vGIp~~rIF~In~~g~~~~ 515 (567)
-+||+.+|+.+++.+| +-+.||++..+..
T Consensus 144 yvGDS~~Dlp~~~~A~----~av~Vn~~~~l~~ 172 (479)
T PRK08238 144 YAGNSAADLPVWAAAR----RAIVVGASPGVAR 172 (479)
T ss_pred EecCCHHHHHHHHhCC----CeEEECCCHHHHH
Confidence 3599999999999999 5579999876643
No 88
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=96.99 E-value=0.0014 Score=65.75 Aligned_cols=67 Identities=13% Similarity=0.273 Sum_probs=50.1
Q ss_pred EEEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCcee
Q psy12533 360 IVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPML 439 (567)
Q Consensus 360 iVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GPvl 439 (567)
+|++|+||||+.++ +.-.+ ...+..++++++|++++.+|||+.... +.++.. .+++ .|++
T Consensus 1 li~~DlDGTll~~~----------~~~~~-~~~~~i~~l~~~g~~~~~~TgR~~~~~---~~~~~~-----~~~~-~~~I 60 (256)
T TIGR01486 1 WIFTDLDGTLLDPH----------GYDWG-PAKEVLERLQELGIPVIPCTSKTAAEV---EYLRKE-----LGLE-DPFI 60 (256)
T ss_pred CEEEcCCCCCcCCC----------CcCch-HHHHHHHHHHHCCCeEEEEcCCCHHHH---HHHHHH-----cCCC-CcEE
Confidence 48999999999875 11122 468899999999999999999998754 666766 5665 5677
Q ss_pred cCCCchh
Q psy12533 440 LNPTSLL 446 (567)
Q Consensus 440 ~spd~l~ 446 (567)
+....+.
T Consensus 61 ~~NGa~i 67 (256)
T TIGR01486 61 VENGGAI 67 (256)
T ss_pred EcCCeEE
Confidence 6665543
No 89
>PRK10444 UMP phosphatase; Provisional
Probab=96.95 E-value=0.0014 Score=66.68 Aligned_cols=66 Identities=21% Similarity=0.381 Sum_probs=49.8
Q ss_pred cEEEEecCCccccCCccccccccccccccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCce
Q psy12533 84 KIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPM 163 (567)
Q Consensus 84 kiVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GPl 163 (567)
|.|+||+||||..++ -..+|+.+..+.++++|.+++++|.|+-.-.....+-|. .-|..+++.-+
T Consensus 2 ~~v~~DlDGtL~~~~------------~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l~---~~G~~~~~~~i 66 (248)
T PRK10444 2 KNVICDIDGVLMHDN------------VAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRFA---TAGVDVPDSVF 66 (248)
T ss_pred cEEEEeCCCceEeCC------------eeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHH---HcCCCCCHhhE
Confidence 579999999999874 236799999999999999999999999766644444444 44444454333
Q ss_pred e
Q psy12533 164 L 164 (567)
Q Consensus 164 l 164 (567)
+
T Consensus 67 ~ 67 (248)
T PRK10444 67 Y 67 (248)
T ss_pred e
Confidence 3
No 90
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=96.90 E-value=0.0022 Score=61.49 Aligned_cols=109 Identities=17% Similarity=0.199 Sum_probs=63.4
Q ss_pred chhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCC--Cc-eecCCCchhhhhhhhhhccCh-hHHHH
Q psy12533 113 QNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPE--GP-MLLNPTSLLNAFHTEVIEKKP-QEFKI 188 (567)
Q Consensus 113 h~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~--GP-lllsp~~l~~al~REvi~k~p-~~fKi 188 (567)
.+|+.++.+.++++|+++.-+|+.+.... +.+++. .+++. |. +....++.+. -++..... ..-|.
T Consensus 89 ~~~~~~~l~~l~~~g~~v~ivS~s~~~~v---~~~~~~-----lg~~~~~~~~l~~~~~g~~~---g~~~~~~~~g~~K~ 157 (202)
T TIGR01490 89 YPEARDLIRWHKAEGHTIVLVSASLTILV---KPLARI-----LGIDNAIGTRLEESEDGIYT---GNIDGNNCKGEGKV 157 (202)
T ss_pred cHHHHHHHHHHHHCCCEEEEEeCCcHHHH---HHHHHH-----cCCcceEecceEEcCCCEEe---CCccCCCCCChHHH
Confidence 44777777888899999999999876555 444443 22221 11 1111222211 11110100 13477
Q ss_pred HHHHHHHHhCCCCCCCEEEecCCcccchhhhhhcCCCCCCEEEEcCCCc
Q psy12533 189 SCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLSRIFTINSRGE 237 (567)
Q Consensus 189 ~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~~rIF~In~~g~ 237 (567)
..++.+.....-. ..-..+||+..+|+.+-+.+|.+ +.|||+.+
T Consensus 158 ~~l~~~~~~~~~~-~~~~~~~gDs~~D~~~~~~a~~~----~~v~~~~~ 201 (202)
T TIGR01490 158 HALAELLAEEQID-LKDSYAYGDSISDLPLLSLVGHP----YVVNPDKK 201 (202)
T ss_pred HHHHHHHHHcCCC-HHHcEeeeCCcccHHHHHhCCCc----EEeCCCCC
Confidence 7777766543211 12356799999999999999966 57888754
No 91
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=96.87 E-value=0.0028 Score=63.40 Aligned_cols=67 Identities=21% Similarity=0.422 Sum_probs=49.1
Q ss_pred EEEEecCCccccCCccccccccccccccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCcee
Q psy12533 85 IVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPML 164 (567)
Q Consensus 85 iVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GPll 164 (567)
+|+||+||||..++. ...+...+..++++++|++|+.+|+|+... .+..+.. .++. +|++
T Consensus 1 li~~DlDGTLl~~~~-----------~i~~~~~~~i~~l~~~G~~~~iaTGR~~~~---~~~~~~~-----~~~~-~~~I 60 (256)
T TIGR00099 1 LIFIDLDGTLLNDDH-----------TISPSTKEALAKLREKGIKVVLATGRPYKE---VKNILKE-----LGLD-TPFI 60 (256)
T ss_pred CEEEeCCCCCCCCCC-----------ccCHHHHHHHHHHHHCCCeEEEEeCCCHHH---HHHHHHH-----cCCC-CCEE
Confidence 489999999997641 234567889999999999999999999653 4666666 3443 3666
Q ss_pred cCCCchh
Q psy12533 165 LNPTSLL 171 (567)
Q Consensus 165 lsp~~l~ 171 (567)
+...++.
T Consensus 61 ~~NGa~i 67 (256)
T TIGR00099 61 TANGAAV 67 (256)
T ss_pred EcCCcEE
Confidence 6665543
No 92
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=96.86 E-value=0.0027 Score=66.58 Aligned_cols=118 Identities=17% Similarity=0.290 Sum_probs=70.6
Q ss_pred eEEEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCce
Q psy12533 359 KIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPM 438 (567)
Q Consensus 359 kiVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GPv 438 (567)
|+|++|+||||..++. ..| +-+.+..++++++|..|+.+|||+..-. +.+.+.+ ++. .|+
T Consensus 2 KLIftDLDGTLLd~~~---------~~~--~~a~~aL~~Lk~~GI~vVlaTGRt~~ev---~~l~~~L-----gl~-~p~ 61 (302)
T PRK12702 2 RLVLSSLDGSLLDLEF---------NSY--GAARQALAALERRSIPLVLYSLRTRAQL---EHLCRQL-----RLE-HPF 61 (302)
T ss_pred cEEEEeCCCCCcCCCC---------cCC--HHHHHHHHHHHHCCCEEEEEcCCCHHHH---HHHHHHh-----CCC-CeE
Confidence 7899999999998742 233 3478889999999999999999987755 4444452 232 244
Q ss_pred ecCCC-------chhhh-h-hhhhhcc---------ChhHHHHHHHHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCC
Q psy12533 439 LLNPT-------SLLNA-F-HTEVIEK---------KPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIP 500 (567)
Q Consensus 439 l~spd-------~l~~a-l-~rEvi~k---------~p~~fK~~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp 500 (567)
++... ..+.. + ..+.... .|...=...|+.|+.-+ ..+ +-|||+ -++...-+--|++
T Consensus 62 I~eNGA~I~~p~~~~~~~~~~~~~~~~~~~~~~~lg~~y~~ir~~L~~l~~~~---~~~-f~gF~d-~t~~ei~~~TGL~ 136 (302)
T PRK12702 62 ICEDGSAIYVPEHYFPAGILDEQWQHRPPYYVCALGLPYPCLRHILQQVRQDS---HLD-LIGFGD-WTASELAAATGIP 136 (302)
T ss_pred EEeCCcEEEEccccccccccccccccCCCceEEecCCCHHHHHHHHHHHHHHh---CCC-ceehhh-CCHHHHHHHhCcC
Confidence 44332 22100 0 0000000 11122223466666632 234 579999 7777777777887
Q ss_pred C
Q psy12533 501 L 501 (567)
Q Consensus 501 ~ 501 (567)
.
T Consensus 137 ~ 137 (302)
T PRK12702 137 L 137 (302)
T ss_pred H
Confidence 5
No 93
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=96.84 E-value=0.0015 Score=57.57 Aligned_cols=53 Identities=15% Similarity=0.318 Sum_probs=39.7
Q ss_pred EEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHh
Q psy12533 361 VISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQS 425 (567)
Q Consensus 361 VIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~ 425 (567)
|+||+||||-..+ -.=||++++.+.++++|+++++||-.+-.-.....+-|+.
T Consensus 1 ~l~D~dGvl~~g~------------~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~ 53 (101)
T PF13344_consen 1 FLFDLDGVLYNGN------------EPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKK 53 (101)
T ss_dssp EEEESTTTSEETT------------EE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHH
T ss_pred CEEeCccEeEeCC------------CcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHh
Confidence 6899999999642 1467999999999999999999999887665444444444
No 94
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=96.83 E-value=0.0031 Score=62.46 Aligned_cols=111 Identities=10% Similarity=0.091 Sum_probs=64.6
Q ss_pred chhHHHHHH-HHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhccC-hhHHHHHH
Q psy12533 388 QNGVTRLFT-KIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKK-PQEFKISC 465 (567)
Q Consensus 388 h~Gva~l~~-~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GPvl~spd~l~~al~rEvi~k~-p~~fK~~~ 465 (567)
.|||.++.. +.++.|++++-+||-+...++..-+.+..+ +.. -++.+. +-..-..++...+ --+=|...
T Consensus 96 ~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~-----~~~--~~i~t~--le~~~gg~~~g~~c~g~~Kv~r 166 (210)
T TIGR01545 96 FPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFI-----HRL--NLIASQ--IERGNGGWVLPLRCLGHEKVAQ 166 (210)
T ss_pred CccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhcccc-----ccC--cEEEEE--eEEeCCceEcCccCCChHHHHH
Confidence 578888885 677789999999998877665444332110 000 112111 0000001110110 02336665
Q ss_pred HHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCCCCCEEEEcCCCcccc
Q psy12533 466 LRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLSRIFTINSRGEVKH 515 (567)
Q Consensus 466 L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~~rIF~In~~g~~~~ 515 (567)
|+... +. ....+.+||+..+|.-+...||-| +.|||+..+++
T Consensus 167 l~~~~---~~-~~~~~~aYsDS~~D~pmL~~a~~~----~~Vnp~~~L~~ 208 (210)
T TIGR01545 167 LEQKI---GS-PLKLYSGYSDSKQDNPLLAFCEHR----WRVSKRGELQQ 208 (210)
T ss_pred HHHHh---CC-ChhheEEecCCcccHHHHHhCCCc----EEECcchHhcc
Confidence 55433 22 233457999999999999999987 69999988864
No 95
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=96.82 E-value=0.002 Score=62.58 Aligned_cols=65 Identities=18% Similarity=0.332 Sum_probs=46.6
Q ss_pred EEEecCCccccCCccccccccccccccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceec
Q psy12533 86 VISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLL 165 (567)
Q Consensus 86 VISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GPlll 165 (567)
|+||+||||..++. -..+-..+..++++++|++|+.+|+|+.... +.+++. .++| .|+++
T Consensus 1 i~~DlDGTLl~~~~-----------~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~---~~~~~~-----l~~~-~~~i~ 60 (225)
T TIGR01482 1 IASDIDGTLTDPNR-----------AINESALEAIRKAESVGIPVVLVTGNSVQFA---RALAKL-----IGTP-DPVIA 60 (225)
T ss_pred CeEeccCccCCCCc-----------ccCHHHHHHHHHHHHCCCEEEEEcCCchHHH---HHHHHH-----hCCC-CeEEE
Confidence 58999999998752 1234466778889999999999999998765 445555 3333 46766
Q ss_pred CCCch
Q psy12533 166 NPTSL 170 (567)
Q Consensus 166 sp~~l 170 (567)
...++
T Consensus 61 ~nGa~ 65 (225)
T TIGR01482 61 ENGGE 65 (225)
T ss_pred ecCcE
Confidence 55443
No 96
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=96.81 E-value=0.0026 Score=64.73 Aligned_cols=68 Identities=16% Similarity=0.356 Sum_probs=50.2
Q ss_pred CcEEEEecCCccccCCccccccccccccccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCc
Q psy12533 83 DKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGP 162 (567)
Q Consensus 83 ~kiVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GP 162 (567)
-|+|++|+||||+.++. -..+++.+..++++++|++++-+|+|+.... +..++. .+++ .|
T Consensus 4 ~kli~~DlDGTLl~~~~-----------~~~~~~~~ai~~l~~~Gi~~~iaTgR~~~~~---~~~~~~-----l~l~-~~ 63 (273)
T PRK00192 4 KLLVFTDLDGTLLDHHT-----------YSYEPAKPALKALKEKGIPVIPCTSKTAAEV---EVLRKE-----LGLE-DP 63 (273)
T ss_pred ceEEEEcCcccCcCCCC-----------cCcHHHHHHHHHHHHCCCEEEEEcCCCHHHH---HHHHHH-----cCCC-CC
Confidence 47899999999998642 2345688899999999999999999987554 555655 4454 35
Q ss_pred eecCCCch
Q psy12533 163 MLLNPTSL 170 (567)
Q Consensus 163 lllsp~~l 170 (567)
+++...++
T Consensus 64 ~i~~nGa~ 71 (273)
T PRK00192 64 FIVENGAA 71 (273)
T ss_pred EEEEcCcE
Confidence 66555433
No 97
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=96.81 E-value=0.0048 Score=69.37 Aligned_cols=58 Identities=26% Similarity=0.492 Sum_probs=45.7
Q ss_pred eCCCeEEEEecCCccccCCcccccccccCcCC--cchhHHHHHHHHHHCCceEEEEccCcc
Q psy12533 355 RWNDKIVISDIDGTITKSDVLGHVLPIMGKDW--AQNGVTRLFTKIKENGYKLLYLSARAI 413 (567)
Q Consensus 355 ~~~~kiVIsDIDGTiTkSD~~G~~~~~~GkDw--~h~Gva~l~~~i~~nGY~iiYLSaRpi 413 (567)
....||+.||.||||.+..- |..++.--.|| ..+||.++...++++||+|+-+|.-+.
T Consensus 165 ~~~~Kia~fD~DGTLi~t~s-g~~~~~~~~d~~~l~pgV~e~L~~L~~~Gy~IvIvTNQ~g 224 (526)
T TIGR01663 165 KGQEKIAGFDLDGTIIKTKS-GKVFPKGPDDWQIIFPEIPEKLKELEADGFKICIFTNQGG 224 (526)
T ss_pred CccCcEEEEECCCCccccCC-CccCCCCHHHeeecccCHHHHHHHHHHCCCEEEEEECCcc
Confidence 35679999999999986421 33344444577 489999999999999999999998654
No 98
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=96.79 E-value=0.0024 Score=64.13 Aligned_cols=66 Identities=15% Similarity=0.305 Sum_probs=49.1
Q ss_pred EEEEecCCccccCCccccccccccccccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCcee
Q psy12533 85 IVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPML 164 (567)
Q Consensus 85 iVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GPll 164 (567)
+|++|+||||+.++. +. .. ...+..++++++|++++.+|+|+.... +.+++. .+++ .|++
T Consensus 1 li~~DlDGTll~~~~---------~~-~~-~~~~~i~~l~~~g~~~~~~TgR~~~~~---~~~~~~-----~~~~-~~~I 60 (256)
T TIGR01486 1 WIFTDLDGTLLDPHG---------YD-WG-PAKEVLERLQELGIPVIPCTSKTAAEV---EYLRKE-----LGLE-DPFI 60 (256)
T ss_pred CEEEcCCCCCcCCCC---------cC-ch-HHHHHHHHHHHCCCeEEEEcCCCHHHH---HHHHHH-----cCCC-CcEE
Confidence 489999999998751 11 12 467888999999999999999998754 667766 5565 5677
Q ss_pred cCCCch
Q psy12533 165 LNPTSL 170 (567)
Q Consensus 165 lsp~~l 170 (567)
+...++
T Consensus 61 ~~NGa~ 66 (256)
T TIGR01486 61 VENGGA 66 (256)
T ss_pred EcCCeE
Confidence 666544
No 99
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=96.78 E-value=0.0029 Score=63.18 Aligned_cols=51 Identities=16% Similarity=0.460 Sum_probs=41.1
Q ss_pred EEEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHh
Q psy12533 360 IVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQS 425 (567)
Q Consensus 360 iVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~ 425 (567)
+|+||+||||..++ + .-+...+..++++++|.+++.+|+|+.... +.++..
T Consensus 1 li~~DlDGTLl~~~----------~--~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~---~~~~~~ 51 (225)
T TIGR02461 1 VIFTDLDGTLLPPG----------Y--EPGPAREALEELKDLGFPIVFVSSKTRAEQ---EYYREE 51 (225)
T ss_pred CEEEeCCCCCcCCC----------C--CchHHHHHHHHHHHCCCEEEEEeCCCHHHH---HHHHHH
Confidence 58999999998752 2 234689999999999999999999998754 566666
No 100
>PLN02887 hydrolase family protein
Probab=96.73 E-value=0.0045 Score=70.39 Aligned_cols=63 Identities=16% Similarity=0.180 Sum_probs=51.1
Q ss_pred eeEEeeeCCCeEEEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHh
Q psy12533 349 CYLFKWRWNDKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQS 425 (567)
Q Consensus 349 ~~iylw~~~~kiVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~ 425 (567)
+.+-.+.+.-|+|+||+||||..++- -..+...+..++++++|++|+..|||+.... +.+++.
T Consensus 299 ~~~~~~~~~iKLIa~DLDGTLLn~d~-----------~Is~~t~eAI~kl~ekGi~~vIATGR~~~~i---~~~l~~ 361 (580)
T PLN02887 299 GSLRFYKPKFSYIFCDMDGTLLNSKS-----------QISETNAKALKEALSRGVKVVIATGKARPAV---IDILKM 361 (580)
T ss_pred cchhhhccCccEEEEeCCCCCCCCCC-----------ccCHHHHHHHHHHHHCCCeEEEEcCCCHHHH---HHHHHH
Confidence 45666888899999999999998751 1345678899999999999999999998755 566665
No 101
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=96.73 E-value=0.0033 Score=62.28 Aligned_cols=111 Identities=11% Similarity=0.079 Sum_probs=63.5
Q ss_pred chhHHHHHH-HHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhh-ccChhHHHHHH
Q psy12533 113 QNGVTRLFT-KIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVI-EKKPQEFKISC 190 (567)
Q Consensus 113 h~GVa~Ly~-~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GPlllsp~~l~~al~REvi-~k~p~~fKi~~ 190 (567)
.|||.++.. .+++.|++++-+||.+...++...+.+..+ +.. -++.+.-..-. ..++. ..---+=|...
T Consensus 96 ~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~-----~~~--~~i~t~le~~~--gg~~~g~~c~g~~Kv~r 166 (210)
T TIGR01545 96 FPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFI-----HRL--NLIASQIERGN--GGWVLPLRCLGHEKVAQ 166 (210)
T ss_pred CccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhcccc-----ccC--cEEEEEeEEeC--CceEcCccCCChHHHHH
Confidence 467777775 567789999999998877665554332110 000 01111100000 00000 00111235555
Q ss_pred HHHHHHhCCCCCCCEEEecCCcccchhhhhhcCCCCCCEEEEcCCCceec
Q psy12533 191 LRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLSRIFTINSRGEVKH 240 (567)
Q Consensus 191 L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~~rIF~In~~g~~~~ 240 (567)
|+... .. ....+.+||+..+|..+...||-| +.|||+..+++
T Consensus 167 l~~~~---~~-~~~~~~aYsDS~~D~pmL~~a~~~----~~Vnp~~~L~~ 208 (210)
T TIGR01545 167 LEQKI---GS-PLKLYSGYSDSKQDNPLLAFCEHR----WRVSKRGELQQ 208 (210)
T ss_pred HHHHh---CC-ChhheEEecCCcccHHHHHhCCCc----EEECcchHhcc
Confidence 55433 22 234467999999999999999977 78999988754
No 102
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=96.73 E-value=0.011 Score=63.56 Aligned_cols=136 Identities=18% Similarity=0.218 Sum_probs=76.6
Q ss_pred CeEEEEecCCccccCCcccccccccCcCC-cchhHHHHHHHHHHCCceEEEEccC-cccchHHH-------HHHHH-hcc
Q psy12533 358 DKIVISDIDGTITKSDVLGHVLPIMGKDW-AQNGVTRLFTKIKENGYKLLYLSAR-AIGQSRVT-------REYLQ-SVK 427 (567)
Q Consensus 358 ~kiVIsDIDGTiTkSD~~G~~~~~~GkDw-~h~Gva~l~~~i~~nGY~iiYLSaR-pi~qa~~T-------r~~L~-~~~ 427 (567)
.|++.+|.||||+..-. +++....-.++ ..|||.+++..++++||++.-+|.. .++..... +.++. -+.
T Consensus 2 ~k~l~lDrDgtl~~~~~-~~y~~~~~~~~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~ 80 (354)
T PRK05446 2 QKILFIDRDGTLIEEPP-TDFQVDSLDKLAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFE 80 (354)
T ss_pred CcEEEEeCCCCccCCCC-ccccccCcccceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHH
Confidence 58999999999998642 34332222233 6889999999999999999999984 22211111 11222 122
Q ss_pred cCCccCCCCceecCCCchhhhhhhhhhccCh--hHHHHHHHHHHHhhCCC-CCCCEEEecCCCcccHHhHHHcCCCCCCE
Q psy12533 428 QEDLTLPEGPMLLNPTSLLNAFHTEVIEKKP--QEFKISCLRDIMALFPP-NTQPFYAGYGNKVNDVWSYQAVGIPLSRI 504 (567)
Q Consensus 428 Q~~~~lP~GPvl~spd~l~~al~rEvi~k~p--~~fK~~~L~~i~~lf~~-~~~pf~agfGNr~tDv~aY~~vGIp~~rI 504 (567)
+ .+++---++++++.. .-+.-.++| +.+...+ ...+- ....+| .|++.+|+.+=+++||+.
T Consensus 81 ~--~gl~fd~i~i~~~~~----sd~~~~rKP~p~~l~~a~-----~~l~v~~~~svm--IGDs~sDi~aAk~aGi~~--- 144 (354)
T PRK05446 81 S--QGIKFDEVLICPHFP----EDNCSCRKPKTGLVEEYL-----AEGAIDLANSYV--IGDRETDVQLAENMGIKG--- 144 (354)
T ss_pred H--cCCceeeEEEeCCcC----cccCCCCCCCHHHHHHHH-----HHcCCCcccEEE--EcCCHHHHHHHHHCCCeE---
Confidence 2 444422223332111 011112344 4443322 21211 134444 578999999999999963
Q ss_pred EEEcCC
Q psy12533 505 FTINSR 510 (567)
Q Consensus 505 F~In~~ 510 (567)
+.||+.
T Consensus 145 I~v~~~ 150 (354)
T PRK05446 145 IRYARE 150 (354)
T ss_pred EEEECC
Confidence 345664
No 103
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=96.72 E-value=0.0031 Score=66.20 Aligned_cols=51 Identities=16% Similarity=0.334 Sum_probs=39.9
Q ss_pred cEEEEecCCccccCCccccccccccccccchhHHHHHHHHHHCCceEEEEccCcccchHHHH
Q psy12533 84 KIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTR 145 (567)
Q Consensus 84 kiVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr 145 (567)
|+|++|+|||+..++. ..| +-+.+..++++++|.+|+.+|||+..-....+
T Consensus 2 KLIftDLDGTLLd~~~---------~~~--~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~ 52 (302)
T PRK12702 2 RLVLSSLDGSLLDLEF---------NSY--GAARQALAALERRSIPLVLYSLRTRAQLEHLC 52 (302)
T ss_pred cEEEEeCCCCCcCCCC---------cCC--HHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH
Confidence 7899999999998752 223 33778899999999999999999876543333
No 104
>PTZ00174 phosphomannomutase; Provisional
Probab=96.72 E-value=0.0023 Score=64.35 Aligned_cols=54 Identities=24% Similarity=0.381 Sum_probs=42.3
Q ss_pred CCeEEEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHH
Q psy12533 357 NDKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQ 424 (567)
Q Consensus 357 ~~kiVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~ 424 (567)
.-|+|+||+||||..++- -..+...+..++++++|.+++..|||+.... +..|.
T Consensus 4 ~~klia~DlDGTLL~~~~-----------~is~~~~~ai~~l~~~Gi~~viaTGR~~~~i---~~~l~ 57 (247)
T PTZ00174 4 KKTILLFDVDGTLTKPRN-----------PITQEMKDTLAKLKSKGFKIGVVGGSDYPKI---KEQLG 57 (247)
T ss_pred CCeEEEEECcCCCcCCCC-----------CCCHHHHHHHHHHHHCCCEEEEEcCCCHHHH---HHHHh
Confidence 358999999999998852 1234567889999999999999999987733 55554
No 105
>PLN02645 phosphoglycolate phosphatase
Probab=96.70 E-value=0.0033 Score=65.63 Aligned_cols=60 Identities=23% Similarity=0.352 Sum_probs=46.1
Q ss_pred CCeEEEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCc
Q psy12533 357 NDKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDL 431 (567)
Q Consensus 357 ~~kiVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~ 431 (567)
.-++|+|||||||-..+. .=+|+.+.+++++++|++++++|+|+.... +.+++.+..-|.
T Consensus 27 ~~~~~~~D~DGtl~~~~~------------~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~---~~~~~~l~~lGi 86 (311)
T PLN02645 27 SVETFIFDCDGVIWKGDK------------LIEGVPETLDMLRSMGKKLVFVTNNSTKSR---AQYGKKFESLGL 86 (311)
T ss_pred hCCEEEEeCcCCeEeCCc------------cCcCHHHHHHHHHHCCCEEEEEeCCCCCCH---HHHHHHHHHCCC
Confidence 567899999999987631 237899999999999999999999996655 344444444333
No 106
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=96.61 E-value=0.0033 Score=64.35 Aligned_cols=61 Identities=16% Similarity=0.272 Sum_probs=44.4
Q ss_pred eEEEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCC
Q psy12533 359 KIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLP 434 (567)
Q Consensus 359 kiVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP 434 (567)
++|+|||||||..++ + .-+|+.+++++++++|.++.++|+|+..-. +.+...+..-|....
T Consensus 3 ~~~~~D~DGtl~~~~----------~--~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~---~~~~~~l~~~G~~~~ 63 (279)
T TIGR01452 3 QGFIFDCDGVLWLGE----------R--VVPGAPELLDRLARAGKAALFVTNNSTKSR---AEYALKFARLGFNGL 63 (279)
T ss_pred cEEEEeCCCceEcCC----------e--eCcCHHHHHHHHHHCCCeEEEEeCCCCCCH---HHHHHHHHHcCCCCC
Confidence 689999999998752 1 346899999999999999999999975433 334444444343333
No 107
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=96.61 E-value=0.0045 Score=61.83 Aligned_cols=65 Identities=15% Similarity=0.441 Sum_probs=47.5
Q ss_pred EEEEecCCccccCCccccccccccccccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCcee
Q psy12533 85 IVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPML 164 (567)
Q Consensus 85 iVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GPll 164 (567)
+|+||+||||..++ + .-+...+..++++++|.+++.+|+|+.... +.+++. .++.. |++
T Consensus 1 li~~DlDGTLl~~~----------~--~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~---~~~~~~-----lg~~~-~~I 59 (225)
T TIGR02461 1 VIFTDLDGTLLPPG----------Y--EPGPAREALEELKDLGFPIVFVSSKTRAEQ---EYYREE-----LGVEP-PFI 59 (225)
T ss_pred CEEEeCCCCCcCCC----------C--CchHHHHHHHHHHHCCCEEEEEeCCCHHHH---HHHHHH-----cCCCC-cEE
Confidence 58999999999753 2 234688999999999999999999988753 566666 44433 556
Q ss_pred cCCCch
Q psy12533 165 LNPTSL 170 (567)
Q Consensus 165 lsp~~l 170 (567)
+...++
T Consensus 60 ~~NGa~ 65 (225)
T TIGR02461 60 VENGGA 65 (225)
T ss_pred EcCCcE
Confidence 554433
No 108
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=96.60 E-value=0.013 Score=56.69 Aligned_cols=94 Identities=19% Similarity=0.278 Sum_probs=55.1
Q ss_pred chhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCC-ceecCCCchhhhhhhhhhccChhHHHHHHH
Q psy12533 113 QNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEG-PMLLNPTSLLNAFHTEVIEKKPQEFKISCL 191 (567)
Q Consensus 113 h~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~G-Plllsp~~l~~al~REvi~k~p~~fKi~~L 191 (567)
.+|+.++...+++.|+++..+|+.+.. ..+..|+. .+|..- ..+++.+ ++...+|+ -+++
T Consensus 95 ~~g~~~~l~~l~~~g~~~~i~S~~~~~---~~~~~l~~-----~~l~~~f~~~~~~~--------~~~~~kp~---~~~~ 155 (226)
T PRK13222 95 YPGVKETLAALKAAGYPLAVVTNKPTP---FVAPLLEA-----LGIADYFSVVIGGD--------SLPNKKPD---PAPL 155 (226)
T ss_pred CCCHHHHHHHHHHCCCeEEEEeCCCHH---HHHHHHHH-----cCCccCccEEEcCC--------CCCCCCcC---hHHH
Confidence 358888999999999999999997653 33556655 333210 0111111 11122331 2233
Q ss_pred HHHHHhCCCCCCCEEEecCCcccchhhhhhcCCCC
Q psy12533 192 RDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPL 226 (567)
Q Consensus 192 ~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~ 226 (567)
+.+...+.....- ...+|++.+|+.+=+++|++.
T Consensus 156 ~~~~~~~~~~~~~-~i~igD~~~Di~~a~~~g~~~ 189 (226)
T PRK13222 156 LLACEKLGLDPEE-MLFVGDSRNDIQAARAAGCPS 189 (226)
T ss_pred HHHHHHcCCChhh-eEEECCCHHHHHHHHHCCCcE
Confidence 3333333221222 457999999999999999964
No 109
>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []. ; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....
Probab=96.60 E-value=0.0033 Score=59.89 Aligned_cols=52 Identities=31% Similarity=0.650 Sum_probs=38.5
Q ss_pred eEEEEecCCccccCCcccccccccCcCC--cchhHHHHHHHHHHCCceEEEEccC
Q psy12533 359 KIVISDIDGTITKSDVLGHVLPIMGKDW--AQNGVTRLFTKIKENGYKLLYLSAR 411 (567)
Q Consensus 359 kiVIsDIDGTiTkSD~~G~~~~~~GkDw--~h~Gva~l~~~i~~nGY~iiYLSaR 411 (567)
||..||.||||.+... |..++.=-.|| -+++|.+..++++++||+|+-+|--
T Consensus 1 Kia~fD~DgTLi~~~s-~~~f~~~~~D~~~~~~~v~~~L~~l~~~Gy~IvIvTNQ 54 (159)
T PF08645_consen 1 KIAFFDLDGTLIKTKS-GKKFPKDPDDWKFFPPGVPEALRELHKKGYKIVIVTNQ 54 (159)
T ss_dssp SEEEE-SCTTTEE-ST-STTS-SSTCGGEEC-TTHHHHHHHHHHTTEEEEEEEE-
T ss_pred CEEEEeCCCCccCCCC-CCcCcCCHHHhhhcchhHHHHHHHHHhcCCeEEEEeCc
Confidence 7899999999887654 33333335677 5789999999999999999999964
No 110
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=96.58 E-value=0.0089 Score=57.29 Aligned_cols=99 Identities=21% Similarity=0.291 Sum_probs=58.9
Q ss_pred chhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCC--CCceecCCCchhhhhhhhhhccC--hhHHHH
Q psy12533 113 QNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLP--EGPMLLNPTSLLNAFHTEVIEKK--PQEFKI 188 (567)
Q Consensus 113 h~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP--~GPlllsp~~l~~al~REvi~k~--p~~fKi 188 (567)
.+|+.++.+.++++||++.-+|+-+. ...+..|+. .+|- ---++.+. ++...| |+.|+.
T Consensus 94 ~~~~~~~L~~L~~~g~~~~i~Sn~~~---~~~~~~l~~-----~gl~~~fd~i~~s~---------~~~~~KP~~~~~~~ 156 (198)
T TIGR01428 94 HPDVPAGLRALKERGYRLAILSNGSP---AMLKSLVKH-----AGLDDPFDAVLSAD---------AVRAYKPAPQVYQL 156 (198)
T ss_pred CCCHHHHHHHHHHCCCeEEEEeCCCH---HHHHHHHHH-----CCChhhhheeEehh---------hcCCCCCCHHHHHH
Confidence 46888999999999999999998654 344555555 3331 11122221 222334 444554
Q ss_pred HHHHHHHHhCCCCCCCEEEecCCcccchhhhhhcCCCCCCEEEEcCCCc
Q psy12533 189 SCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLSRIFTINSRGE 237 (567)
Q Consensus 189 ~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~~rIF~In~~g~ 237 (567)
.+ +.+ .+ ++ .. ..-+|++..|+.+=+++|+.. .-|++.|+
T Consensus 157 ~~-~~~-~~-~p-~~--~~~vgD~~~Di~~A~~~G~~~---i~v~r~~~ 196 (198)
T TIGR01428 157 AL-EAL-GV-PP-DE--VLFVASNPWDLGGAKKFGFKT---AWVNRPGE 196 (198)
T ss_pred HH-HHh-CC-Ch-hh--EEEEeCCHHHHHHHHHCCCcE---EEecCCCC
Confidence 44 221 11 11 11 345788899999999999974 34566654
No 111
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=96.56 E-value=0.006 Score=56.87 Aligned_cols=99 Identities=17% Similarity=0.199 Sum_probs=58.3
Q ss_pred cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCC--C-ceecCCCchhhhhhhhhhc-cCh-hHH
Q psy12533 387 AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPE--G-PMLLNPTSLLNAFHTEVIE-KKP-QEF 461 (567)
Q Consensus 387 ~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~--G-Pvl~spd~l~~al~rEvi~-k~p-~~f 461 (567)
..+|+.++++.++++|+++.-+|+.... .++.+++. ++++. + .+....++.+. .+... ..+ ..-
T Consensus 74 ~~~g~~~~l~~l~~~g~~~~ivS~~~~~---~i~~~~~~-----~g~~~~~~~~~~~~~~g~~~---g~~~~~~~~~~~~ 142 (177)
T TIGR01488 74 LRPGARELISWLKERGIDTVIVSGGFDF---FVEPVAEK-----LGIDDVFANRLEFDDNGLLT---GPIEGQVNPEGEC 142 (177)
T ss_pred cCcCHHHHHHHHHHCCCEEEEECCCcHH---HHHHHHHH-----cCCchheeeeEEECCCCEEe---CccCCcccCCcch
Confidence 3479999999999999999999997654 44556655 34431 0 01111122111 00101 112 345
Q ss_pred HHHHHHHHHhhCCCCCCCEEEecCCCcccHHhHHHc
Q psy12533 462 KISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAV 497 (567)
Q Consensus 462 K~~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~v 497 (567)
|.+.++.++.-.+... .-...||+..+|+.+-+.|
T Consensus 143 K~~~l~~~~~~~~~~~-~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 143 KGKVLKELLEESKITL-KKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred HHHHHHHHHHHhCCCH-HHEEEEeCCHHHHHHHhcC
Confidence 8888888766432111 2256899999999887653
No 112
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=96.54 E-value=0.0076 Score=53.17 Aligned_cols=53 Identities=15% Similarity=0.318 Sum_probs=40.2
Q ss_pred EEEecCCccccCCccccccccccccccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHh
Q psy12533 86 VISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQS 150 (567)
Q Consensus 86 VISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~ 150 (567)
|++|+||||-..+ -.=||++++.+.++++|.++++||-.+-.-.....+-|+.
T Consensus 1 ~l~D~dGvl~~g~------------~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~ 53 (101)
T PF13344_consen 1 FLFDLDGVLYNGN------------EPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKK 53 (101)
T ss_dssp EEEESTTTSEETT------------EE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHH
T ss_pred CEEeCccEeEeCC------------CcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHh
Confidence 6899999999743 1457999999999999999999999877665444555554
No 113
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=96.53 E-value=0.0092 Score=67.14 Aligned_cols=58 Identities=26% Similarity=0.496 Sum_probs=45.1
Q ss_pred cCCCcEEEEecCCccccCCcccccccccccccc--chhHHHHHHHHHHCCceEEEEccCcc
Q psy12533 80 RWNDKIVISDIDGTITKSDVLGHVLPIMGKDWA--QNGVTRLFTKIKENGYKLLYLSARAI 138 (567)
Q Consensus 80 ~~~~kiVISDIDGTITkSD~lG~il~~lGkDwt--h~GVa~Ly~~i~~nGY~ilYLSaRpi 138 (567)
....|++.||.||||....- |..++.--.||. .+||.++...++++||+|+-+|.-+.
T Consensus 165 ~~~~Kia~fD~DGTLi~t~s-g~~~~~~~~d~~~l~pgV~e~L~~L~~~Gy~IvIvTNQ~g 224 (526)
T TIGR01663 165 KGQEKIAGFDLDGTIIKTKS-GKVFPKGPDDWQIIFPEIPEKLKELEADGFKICIFTNQGG 224 (526)
T ss_pred CccCcEEEEECCCCccccCC-CccCCCCHHHeeecccCHHHHHHHHHHCCCEEEEEECCcc
Confidence 35578999999999986422 333444445774 79999999999999999999998544
No 114
>PTZ00174 phosphomannomutase; Provisional
Probab=96.51 E-value=0.0037 Score=62.88 Aligned_cols=47 Identities=23% Similarity=0.414 Sum_probs=38.3
Q ss_pred CCcEEEEecCCccccCCccccccccccccccchhHHHHHHHHHHCCceEEEEccCccc
Q psy12533 82 NDKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIG 139 (567)
Q Consensus 82 ~~kiVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~ 139 (567)
.-|+|+||+||||..++- . -.+...+..++++++|.+|+.+|||+..
T Consensus 4 ~~klia~DlDGTLL~~~~--~---------is~~~~~ai~~l~~~Gi~~viaTGR~~~ 50 (247)
T PTZ00174 4 KKTILLFDVDGTLTKPRN--P---------ITQEMKDTLAKLKSKGFKIGVVGGSDYP 50 (247)
T ss_pred CCeEEEEECcCCCcCCCC--C---------CCHHHHHHHHHHHHCCCEEEEEcCCCHH
Confidence 358999999999998862 1 1234677889999999999999999876
No 115
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=96.49 E-value=0.0066 Score=56.58 Aligned_cols=98 Identities=17% Similarity=0.216 Sum_probs=57.2
Q ss_pred chhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCC--C-ceecCCCchhhhhhhhhhc-cCh-hHHH
Q psy12533 113 QNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPE--G-PMLLNPTSLLNAFHTEVIE-KKP-QEFK 187 (567)
Q Consensus 113 h~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~--G-Plllsp~~l~~al~REvi~-k~p-~~fK 187 (567)
.+|+.++.+.++++|+++.-+|+... ..++.+++. ++++. + .+....++.+.. +... ..+ ..-|
T Consensus 75 ~~g~~~~l~~l~~~g~~~~ivS~~~~---~~i~~~~~~-----~g~~~~~~~~~~~~~~g~~~g---~~~~~~~~~~~~K 143 (177)
T TIGR01488 75 RPGARELISWLKERGIDTVIVSGGFD---FFVEPVAEK-----LGIDDVFANRLEFDDNGLLTG---PIEGQVNPEGECK 143 (177)
T ss_pred CcCHHHHHHHHHHCCCEEEEECCCcH---HHHHHHHHH-----cCCchheeeeEEECCCCEEeC---ccCCcccCCcchH
Confidence 46899999999999999999999654 444556655 33331 0 011111211100 0000 111 2358
Q ss_pred HHHHHHHHHhCCCCCCCEEEecCCcccchhhhhhc
Q psy12533 188 ISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAV 222 (567)
Q Consensus 188 i~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~v 222 (567)
.+.++.++...+-. ..-+..||+..+|+.+-+.|
T Consensus 144 ~~~l~~~~~~~~~~-~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 144 GKVLKELLEESKIT-LKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred HHHHHHHHHHhCCC-HHHEEEEeCCHHHHHHHhcC
Confidence 88888877653221 12267899999999886643
No 116
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=96.49 E-value=0.015 Score=58.14 Aligned_cols=96 Identities=10% Similarity=0.090 Sum_probs=54.7
Q ss_pred hhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhccChhHHHHHHHHH
Q psy12533 114 NGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRD 193 (567)
Q Consensus 114 ~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GPlllsp~~l~~al~REvi~k~p~~fKi~~L~~ 193 (567)
+||.++...++++||++.-+|+.+.... +..|+.+.-.++ +. -.++.+. ... .-.++|+.|..++ +.
T Consensus 102 pg~~e~L~~L~~~g~~l~IvT~~~~~~~---~~~l~~~gl~~~-f~-d~ii~~~-~~~------~~KP~p~~~~~a~-~~ 168 (253)
T TIGR01422 102 PGVIEVIAYLRARGIKIGSTTGYTREMM---DVVAPEAALQGY-RP-DYNVTTD-DVP------AGRPAPWMALKNA-IE 168 (253)
T ss_pred CCHHHHHHHHHHCCCeEEEECCCcHHHH---HHHHHHHHhcCC-CC-ceEEccc-cCC------CCCCCHHHHHHHH-HH
Confidence 4888899999999999999999765444 455544211111 11 1233222 111 1133455554332 22
Q ss_pred HHHhCCCCCCCEEEecCCcccchhhhhhcCCCC
Q psy12533 194 IMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPL 226 (567)
Q Consensus 194 i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~ 226 (567)
+ .+-++ .. ...+|++.+|+.+=+++|+..
T Consensus 169 l-~~~~~-~~--~l~IGDs~~Di~aA~~aGi~~ 197 (253)
T TIGR01422 169 L-GVYDV-AA--CVKVGDTVPDIEEGRNAGMWT 197 (253)
T ss_pred c-CCCCc-hh--eEEECCcHHHHHHHHHCCCeE
Confidence 1 11001 11 456889999999999999964
No 117
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=96.49 E-value=0.01 Score=56.92 Aligned_cols=102 Identities=19% Similarity=0.288 Sum_probs=61.0
Q ss_pred cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCC--CCceecCCCchhhhhhhhhhccChhHHHHH
Q psy12533 387 AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLP--EGPMLLNPTSLLNAFHTEVIEKKPQEFKIS 464 (567)
Q Consensus 387 ~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP--~GPvl~spd~l~~al~rEvi~k~p~~fK~~ 464 (567)
..||+.++.+.++++||++.-+|+-+.. ..+..|+. .+|- ---++++.+ . ....++|+.|+..
T Consensus 93 ~~~~~~~~L~~L~~~g~~~~i~Sn~~~~---~~~~~l~~-----~gl~~~fd~i~~s~~-~------~~~KP~~~~~~~~ 157 (198)
T TIGR01428 93 PHPDVPAGLRALKERGYRLAILSNGSPA---MLKSLVKH-----AGLDDPFDAVLSADA-V------RAYKPAPQVYQLA 157 (198)
T ss_pred CCCCHHHHHHHHHHCCCeEEEEeCCCHH---HHHHHHHH-----CCChhhhheeEehhh-c------CCCCCCHHHHHHH
Confidence 4579999999999999999999986543 34555554 3331 111222211 1 0123445666665
Q ss_pred HHHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCCCCCEEEEcCCCc
Q psy12533 465 CLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLSRIFTINSRGE 512 (567)
Q Consensus 465 ~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~~rIF~In~~g~ 512 (567)
+ +.+ .+ .+ .. ..-+|++.+|+.+=+++|+.. .-|++.|+
T Consensus 158 ~-~~~-~~-~p-~~--~~~vgD~~~Di~~A~~~G~~~---i~v~r~~~ 196 (198)
T TIGR01428 158 L-EAL-GV-PP-DE--VLFVASNPWDLGGAKKFGFKT---AWVNRPGE 196 (198)
T ss_pred H-HHh-CC-Ch-hh--EEEEeCCHHHHHHHHHCCCcE---EEecCCCC
Confidence 4 211 11 11 22 235888899999999999974 34576654
No 118
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=96.48 E-value=0.01 Score=58.81 Aligned_cols=94 Identities=18% Similarity=0.293 Sum_probs=55.6
Q ss_pred chhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCC-ceecCCCchhhhhhhhhhccChhHHHHHHH
Q psy12533 388 QNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEG-PMLLNPTSLLNAFHTEVIEKKPQEFKISCL 466 (567)
Q Consensus 388 h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~G-Pvl~spd~l~~al~rEvi~k~p~~fK~~~L 466 (567)
.||+.++...++++|+++..+|+.+...+ +..|.. .++..- .++.+.+.. ....++|+.|...+
T Consensus 97 ~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~---~~~l~~-----~~l~~~f~~i~~~~~~------~~~KP~p~~~~~~~- 161 (229)
T PRK13226 97 FDGVEGMLQRLECAGCVWGIVTNKPEYLA---RLILPQ-----LGWEQRCAVLIGGDTL------AERKPHPLPLLVAA- 161 (229)
T ss_pred CCCHHHHHHHHHHCCCeEEEECCCCHHHH---HHHHHH-----cCchhcccEEEecCcC------CCCCCCHHHHHHHH-
Confidence 56888999999999999999999876433 444544 333210 011111111 01234455555432
Q ss_pred HHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCCC
Q psy12533 467 RDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPL 501 (567)
Q Consensus 467 ~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~ 501 (567)
+.+. + ++ .. ..-+|++.+|+.+-+++|+..
T Consensus 162 ~~l~-~-~p-~~--~l~IGDs~~Di~aA~~aG~~~ 191 (229)
T PRK13226 162 ERIG-V-AP-TD--CVYVGDDERDILAARAAGMPS 191 (229)
T ss_pred HHhC-C-Ch-hh--EEEeCCCHHHHHHHHHCCCcE
Confidence 2221 1 11 22 357899999999999999964
No 119
>PLN02645 phosphoglycolate phosphatase
Probab=96.47 E-value=0.0057 Score=63.89 Aligned_cols=57 Identities=23% Similarity=0.319 Sum_probs=44.4
Q ss_pred CCcEEEEecCCccccCCccccccccccccccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHh
Q psy12533 82 NDKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQS 150 (567)
Q Consensus 82 ~~kiVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~ 150 (567)
.-|+|+||+||||-..+. .=+|+.+..++++++|++++++|+|+........+-|+.
T Consensus 27 ~~~~~~~D~DGtl~~~~~------------~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~ 83 (311)
T PLN02645 27 SVETFIFDCDGVIWKGDK------------LIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFES 83 (311)
T ss_pred hCCEEEEeCcCCeEeCCc------------cCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHH
Confidence 457899999999987631 236899999999999999999999996665443333333
No 120
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=96.46 E-value=0.005 Score=63.06 Aligned_cols=55 Identities=15% Similarity=0.236 Sum_probs=42.1
Q ss_pred cEEEEecCCccccCCccccccccccccccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHh
Q psy12533 84 KIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQS 150 (567)
Q Consensus 84 kiVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~ 150 (567)
++|+|||||||..++ + .-+|+.+++++++++|.++.++|+|+..-......-|..
T Consensus 3 ~~~~~D~DGtl~~~~----------~--~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~ 57 (279)
T TIGR01452 3 QGFIFDCDGVLWLGE----------R--VVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFAR 57 (279)
T ss_pred cEEEEeCCCceEcCC----------e--eCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHH
Confidence 689999999998763 1 346799999999999999999999975544333334444
No 121
>PRK08238 hypothetical protein; Validated
Probab=96.45 E-value=0.011 Score=65.97 Aligned_cols=128 Identities=21% Similarity=0.249 Sum_probs=81.9
Q ss_pred CcEEEEecCCccccCCccccc--------------c----------------ccccccc----cchhHHHHHHHHHHCCc
Q psy12533 83 DKIVISDIDGTITKSDVLGHV--------------L----------------PIMGKDW----AQNGVTRLFTKIKENGY 128 (567)
Q Consensus 83 ~kiVISDIDGTITkSD~lG~i--------------l----------------~~lGkDw----th~GVa~Ly~~i~~nGY 128 (567)
.+..|+|+|||++++|.+-.. + -.++-|- -++|+.++.++.+++|+
T Consensus 10 ~~pl~~DlDgTLi~td~l~e~~~~~l~~~p~~~~~l~~~~~~g~a~lK~~~a~~~~~d~~~lp~~pga~e~L~~lk~~G~ 89 (479)
T PRK08238 10 DLPLVVDLDGTLIRTDLLHESIFALLRRNPLALLRLPLWLLRGKAALKRRLARRVDLDVATLPYNEEVLDYLRAERAAGR 89 (479)
T ss_pred CCCEEEeCCCCccccchHHHHHHHHHHhChHHHHHHHHHHHhcHHHHHHHHHhhcCCChhhCCCChhHHHHHHHHHHCCC
Confidence 347899999999999984310 0 0112221 35799999999999999
Q ss_pred eEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhccChhHHHHHHHHHHHHhCCCCCCCEEEe
Q psy12533 129 KLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAG 208 (567)
Q Consensus 129 ~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GPlllsp~~l~~al~REvi~k~p~~fKi~~L~~i~~lf~~~~~pf~ag 208 (567)
++.-+||.+...++...+.+ ++ .-.++.+.+. ...+|+. |.+.+. +.++. ..+ .-
T Consensus 90 ~v~LaTas~~~~a~~i~~~l--------Gl-Fd~Vigsd~~---------~~~kg~~-K~~~l~---~~l~~--~~~-~y 144 (479)
T PRK08238 90 KLVLATASDERLAQAVAAHL--------GL-FDGVFASDGT---------TNLKGAA-KAAALV---EAFGE--RGF-DY 144 (479)
T ss_pred EEEEEeCCCHHHHHHHHHHc--------CC-CCEEEeCCCc---------cccCCch-HHHHHH---HHhCc--cCe-eE
Confidence 99999998877665443333 22 1124433321 1233332 555544 33443 222 23
Q ss_pred cCCcccchhhhhhcCCCCCCEEEEcCCCcee
Q psy12533 209 YGNKVNDVWSYQAVGIPLSRIFTINSRGEVK 239 (567)
Q Consensus 209 fGNr~tDv~aY~~vGIp~~rIF~In~~g~~~ 239 (567)
+||+.+|+.+++.+| +-+.||++..+.
T Consensus 145 vGDS~~Dlp~~~~A~----~av~Vn~~~~l~ 171 (479)
T PRK08238 145 AGNSAADLPVWAAAR----RAIVVGASPGVA 171 (479)
T ss_pred ecCCHHHHHHHHhCC----CeEEECCCHHHH
Confidence 599999999999999 557999986543
No 122
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=96.45 E-value=0.0054 Score=55.94 Aligned_cols=57 Identities=21% Similarity=0.359 Sum_probs=42.4
Q ss_pred eEEEEecCCccccCCc--ccccccccCcCCcchhHHHHHHHHHHCCceEEEEccC-cccch
Q psy12533 359 KIVISDIDGTITKSDV--LGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSAR-AIGQS 416 (567)
Q Consensus 359 kiVIsDIDGTiTkSD~--~G~~~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaR-pi~qa 416 (567)
|++++|+||||+-... .++ .+.++.+-.-+|+.++.+.++++|+++.-+|++ +...+
T Consensus 1 kli~~DlD~Tl~~~~~~~~~~-~~~~~~~~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~ 60 (128)
T TIGR01681 1 KVIVFDLDNTLWTGENIVVGE-DPIIDLEVTIKEIRDKLQTLKKNGFLLALASYNDDPHVA 60 (128)
T ss_pred CEEEEeCCCCCCCCCcccccC-CcchhhHHHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHH
Confidence 6899999999996642 111 122233346789999999999999999999998 55443
No 123
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=96.44 E-value=0.019 Score=61.76 Aligned_cols=135 Identities=20% Similarity=0.285 Sum_probs=76.7
Q ss_pred CcEEEEecCCccccCCcccccccc-ccccccchhHHHHHHHHHHCCceEEEEccC-cccchH-----------HHHHHHH
Q psy12533 83 DKIVISDIDGTITKSDVLGHVLPI-MGKDWAQNGVTRLFTKIKENGYKLLYLSAR-AIGQSR-----------VTREYLQ 149 (567)
Q Consensus 83 ~kiVISDIDGTITkSD~lG~il~~-lGkDwth~GVa~Ly~~i~~nGY~ilYLSaR-pi~~a~-----------~Tr~~L~ 149 (567)
.|++.+|.||||+..-. +++... ..+--..+||.++...++++||++.-+|.. .++... .+..-|+
T Consensus 2 ~k~l~lDrDgtl~~~~~-~~y~~~~~~~~~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~ 80 (354)
T PRK05446 2 QKILFIDRDGTLIEEPP-TDFQVDSLDKLAFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFE 80 (354)
T ss_pred CcEEEEeCCCCccCCCC-ccccccCcccceECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHH
Confidence 57999999999998642 343211 222245679999999999999999999984 222211 2222333
Q ss_pred hcccCCccCCCCceecCCCchhhhhhhhhhccChhHHHHHHHHHHHHhCCCC-CCCEEEecCCcccchhhhhhcCCCCCC
Q psy12533 150 SVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPN-TQPFYAGYGNKVNDVWSYQAVGIPLSR 228 (567)
Q Consensus 150 ~~~q~~~~LP~GPlllsp~~l~~al~REvi~k~p~~fKi~~L~~i~~lf~~~-~~pf~agfGNr~tDv~aY~~vGIp~~r 228 (567)
. .+++---++++++... -+...++| |.+++..+.....-+ ...+| .|++.+|+.+=+++||+.
T Consensus 81 ~-----~gl~fd~i~i~~~~~s----d~~~~rKP---~p~~l~~a~~~l~v~~~~svm--IGDs~sDi~aAk~aGi~~-- 144 (354)
T PRK05446 81 S-----QGIKFDEVLICPHFPE----DNCSCRKP---KTGLVEEYLAEGAIDLANSYV--IGDRETDVQLAENMGIKG-- 144 (354)
T ss_pred H-----cCCceeeEEEeCCcCc----ccCCCCCC---CHHHHHHHHHHcCCCcccEEE--EcCCHHHHHHHHHCCCeE--
Confidence 3 4444222333321110 01123345 333333333322211 33444 478899999999999963
Q ss_pred EEEEcCC
Q psy12533 229 IFTINSR 235 (567)
Q Consensus 229 IF~In~~ 235 (567)
+.||+.
T Consensus 145 -I~v~~~ 150 (354)
T PRK05446 145 -IRYARE 150 (354)
T ss_pred -EEEECC
Confidence 345553
No 124
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=96.43 E-value=0.0097 Score=55.78 Aligned_cols=101 Identities=14% Similarity=0.072 Sum_probs=54.0
Q ss_pred chhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCC--ceecC-----CCchhhhhhhh--hhccCh
Q psy12533 388 QNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEG--PMLLN-----PTSLLNAFHTE--VIEKKP 458 (567)
Q Consensus 388 h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~G--Pvl~s-----pd~l~~al~rE--vi~k~p 458 (567)
.+|+.++++.++++||++..+|+...... +..++. ++++.= .++.+ +++.+.....+ +....+
T Consensus 74 ~~g~~~ll~~l~~~g~~~~i~S~~~~~~~---~~~l~~-----~~l~~~f~~i~~~~~~~~~~g~~~~~~~~~~~~~~~~ 145 (188)
T TIGR01489 74 DPGFKEFIAFIKEHGIDFIVISDGNDFFI---DPVLEG-----IGEKDVFIEIYSNPASFDNDGRHIVWPHHCHGCCSCP 145 (188)
T ss_pred CccHHHHHHHHHHcCCcEEEEeCCcHHHH---HHHHHH-----cCChhheeEEeccCceECCCCcEEEecCCCCccCcCC
Confidence 44666777788899999999998755433 344443 233210 12221 12222111111 000111
Q ss_pred -hHHHHHHHHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCC
Q psy12533 459 -QEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIP 500 (567)
Q Consensus 459 -~~fK~~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp 500 (567)
-.-|.++++.++.-.+ .. ...+|+..+|+.|=+++++-
T Consensus 146 ~g~~K~~~~~~~~~~~~--~~--~i~iGD~~~D~~aa~~~d~~ 184 (188)
T TIGR01489 146 CGCCKGKVIHKLSEPKY--QH--IIYIGDGVTDVCPAKLSDVV 184 (188)
T ss_pred CCCCHHHHHHHHHhhcC--ce--EEEECCCcchhchHhcCCcc
Confidence 1237777777766321 22 34678999999998877653
No 125
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=96.43 E-value=0.022 Score=56.91 Aligned_cols=97 Identities=10% Similarity=0.092 Sum_probs=57.0
Q ss_pred chhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhccChhHHHHHHHH
Q psy12533 388 QNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLR 467 (567)
Q Consensus 388 h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GPvl~spd~l~~al~rEvi~k~p~~fK~~~L~ 467 (567)
-||+.++...++++||++.-+|+.+.... +..|+.+.-.++ +.+ .+++ .+... .-.++|+.|..++ +
T Consensus 101 ~pg~~e~L~~L~~~g~~l~IvT~~~~~~~---~~~l~~~gl~~~-f~d-~ii~-~~~~~------~~KP~p~~~~~a~-~ 167 (253)
T TIGR01422 101 IPGVIEVIAYLRARGIKIGSTTGYTREMM---DVVAPEAALQGY-RPD-YNVT-TDDVP------AGRPAPWMALKNA-I 167 (253)
T ss_pred CCCHHHHHHHHHHCCCeEEEECCCcHHHH---HHHHHHHHhcCC-CCc-eEEc-cccCC------CCCCCHHHHHHHH-H
Confidence 45888999999999999999999875544 455544221111 111 2332 22221 1134556665433 2
Q ss_pred HHHhhCCCCCCCEEEecCCCcccHHhHHHcCCCC
Q psy12533 468 DIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPL 501 (567)
Q Consensus 468 ~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~ 501 (567)
.+ .+-++ .. ...+|++.+|+.|=+++|+..
T Consensus 168 ~l-~~~~~-~~--~l~IGDs~~Di~aA~~aGi~~ 197 (253)
T TIGR01422 168 EL-GVYDV-AA--CVKVGDTVPDIEEGRNAGMWT 197 (253)
T ss_pred Hc-CCCCc-hh--eEEECCcHHHHHHHHHCCCeE
Confidence 22 11001 11 347899999999999999964
No 126
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=96.42 E-value=0.0084 Score=57.86 Aligned_cols=110 Identities=19% Similarity=0.314 Sum_probs=68.3
Q ss_pred CeEEEEecCCccccCCcccccccccCcCC----cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccC
Q psy12533 358 DKIVISDIDGTITKSDVLGHVLPIMGKDW----AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTL 433 (567)
Q Consensus 358 ~kiVIsDIDGTiTkSD~~G~~~~~~GkDw----~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~l 433 (567)
-|++||||||++|---+ ++..-|.-+ ++.|.+ .+.++++||++..+|+.+...+ +..|+. .++
T Consensus 7 i~~~v~d~dGv~tdg~~---~~~~~g~~~~~~~~~D~~~--~~~L~~~Gi~laIiT~k~~~~~---~~~l~~-----lgi 73 (169)
T TIGR02726 7 IKLVILDVDGVMTDGRI---VINDEGIESRNFDIKDGMG--VIVLQLCGIDVAIITSKKSGAV---RHRAEE-----LKI 73 (169)
T ss_pred CeEEEEeCceeeECCeE---EEcCCCcEEEEEecchHHH--HHHHHHCCCEEEEEECCCcHHH---HHHHHH-----CCC
Confidence 68899999999996421 133344433 333433 3457889999999999876554 666766 444
Q ss_pred CCCceecCCCchhhhhhhhhhccChhHHHHHHHHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCC
Q psy12533 434 PEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIP 500 (567)
Q Consensus 434 P~GPvl~spd~l~~al~rEvi~k~p~~fK~~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp 500 (567)
.. +|.. +.++|+.++..+ .-+.-...- .+.||+..+|+.+-+.+|+.
T Consensus 74 ~~---------~f~~-----~kpkp~~~~~~~-----~~l~~~~~e-v~~iGD~~nDi~~~~~ag~~ 120 (169)
T TIGR02726 74 KR---------FHEG-----IKKKTEPYAQML-----EEMNISDAE-VCYVGDDLVDLSMMKRVGLA 120 (169)
T ss_pred cE---------EEec-----CCCCHHHHHHHH-----HHcCcCHHH-EEEECCCHHHHHHHHHCCCe
Confidence 41 1111 234565444332 222111122 56899999999999999976
No 127
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=96.40 E-value=0.0044 Score=65.56 Aligned_cols=128 Identities=15% Similarity=0.185 Sum_probs=75.1
Q ss_pred cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCC---ceecCCCchhhhhhhhhhccChhHHHH
Q psy12533 387 AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEG---PMLLNPTSLLNAFHTEVIEKKPQEFKI 463 (567)
Q Consensus 387 ~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~G---Pvl~spd~l~~al~rEvi~k~p~~fK~ 463 (567)
..||+.++++.++++||++.-+|+-....++.. ++. .++... -+-+....+...+..+++..+| |.
T Consensus 182 l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l---~~~-----Lgld~~~an~lei~dg~ltg~v~g~iv~~k~---K~ 250 (322)
T PRK11133 182 LMPGLTELVLKLQALGWKVAIASGGFTYFADYL---RDK-----LRLDAAVANELEIMDGKLTGNVLGDIVDAQY---KA 250 (322)
T ss_pred CChhHHHHHHHHHHcCCEEEEEECCcchhHHHH---HHH-----cCCCeEEEeEEEEECCEEEeEecCccCCccc---HH
Confidence 357899999999999999999999876554333 333 233210 0011111111111112223333 77
Q ss_pred HHHHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCCCCCEEEEcCCCcccccccccccccHhhHHhhh
Q psy12533 464 SCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLSRIFTINSRGEVKHEMTQTFQSTYSNMSYLV 532 (567)
Q Consensus 464 ~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~~rIF~In~~g~~~~~~~~~~~~sY~~l~~~v 532 (567)
++|+.++.-++-...- ..+||+..+|+.+-+.+|+.. ..|++=+++. .+.... ++..|..++
T Consensus 251 ~~L~~la~~lgi~~~q-tIaVGDg~NDl~m~~~AGlgi----A~nAkp~Vk~-~Ad~~i-~~~~l~~~l 312 (322)
T PRK11133 251 DTLTRLAQEYEIPLAQ-TVAIGDGANDLPMIKAAGLGI----AYHAKPKVNE-QAQVTI-RHADLMGVL 312 (322)
T ss_pred HHHHHHHHHcCCChhh-EEEEECCHHHHHHHHHCCCeE----EeCCCHHHHh-hCCEEe-cCcCHHHHH
Confidence 8888887655421122 468999999999999999854 4588755643 333332 355565554
No 128
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=96.37 E-value=0.0021 Score=60.48 Aligned_cols=93 Identities=18% Similarity=0.236 Sum_probs=56.4
Q ss_pred hhHH----HHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhh--hhhhhhccChhH--
Q psy12533 114 NGVT----RLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNA--FHTEVIEKKPQE-- 185 (567)
Q Consensus 114 ~GVa----~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GPlllsp~~l~~a--l~REvi~k~p~~-- 185 (567)
+|+. ++.+.++++|++++-+||-+. ..++..++. .++|.=.++.+.. .-.. .....+ .+..
T Consensus 88 ~~~~~~~~e~i~~~~~~~~~v~IvS~~~~---~~i~~~~~~-----~~i~~~~v~~~~~-~~~~~~~~~~~~--~~~~~~ 156 (192)
T PF12710_consen 88 PGFIPDAMELIRELKDNGIKVVIVSGSPD---EIIEPIAER-----LGIDDDNVIGNEL-FDNGGGIFTGRI--TGSNCG 156 (192)
T ss_dssp TTCHTTHHHHHHHHHHTTSEEEEEEEEEH---HHHHHHHHH-----TTSSEGGEEEEEE-ECTTCCEEEEEE--EEEEES
T ss_pred cCchhhHHHHHHHHHHCCCEEEEECCCcH---HHHHHHHHH-----cCCCceEEEEEee-eecccceeeeeE--CCCCCC
Confidence 5556 999999999999999999654 455666665 6677544444332 1000 000000 1111
Q ss_pred HHHHHHHHH---HHhCCCCCCCEEEecCCcccchhhh
Q psy12533 186 FKISCLRDI---MALFPPNTQPFYAGYGNKVNDVWSY 219 (567)
Q Consensus 186 fKi~~L~~i---~~lf~~~~~pf~agfGNr~tDv~aY 219 (567)
=|.++++.+ ... +. ...-+.++|+..+|+.+-
T Consensus 157 ~K~~~l~~~~~~~~~-~~-~~~~~~~iGDs~~D~~~l 191 (192)
T PF12710_consen 157 GKAEALKELYIRDEE-DI-DPDRVIAIGDSINDLPML 191 (192)
T ss_dssp HHHHHHHHHHHHHHH-TH-TCCEEEEEESSGGGHHHH
T ss_pred cHHHHHHHHHHHhhc-CC-CCCeEEEEECCHHHHHHh
Confidence 388898888 221 11 234478999999998764
No 129
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=96.36 E-value=0.0019 Score=60.80 Aligned_cols=94 Identities=18% Similarity=0.216 Sum_probs=56.9
Q ss_pred hhHH----HHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhh--hhhhhhccChhH--
Q psy12533 389 NGVT----RLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNA--FHTEVIEKKPQE-- 460 (567)
Q Consensus 389 ~Gva----~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GPvl~spd~l~~a--l~rEvi~k~p~~-- 460 (567)
+|+. ++++.++++|++++-+||-+... ++..++. .++|.=.++.+.- .-.. ...+.+. +..
T Consensus 88 ~~~~~~~~e~i~~~~~~~~~v~IvS~~~~~~---i~~~~~~-----~~i~~~~v~~~~~-~~~~~~~~~~~~~--~~~~~ 156 (192)
T PF12710_consen 88 PGFIPDAMELIRELKDNGIKVVIVSGSPDEI---IEPIAER-----LGIDDDNVIGNEL-FDNGGGIFTGRIT--GSNCG 156 (192)
T ss_dssp TTCHTTHHHHHHHHHHTTSEEEEEEEEEHHH---HHHHHHH-----TTSSEGGEEEEEE-ECTTCCEEEEEEE--EEEES
T ss_pred cCchhhHHHHHHHHHHCCCEEEEECCCcHHH---HHHHHHH-----cCCCceEEEEEee-eecccceeeeeEC--CCCCC
Confidence 6666 99999999999999999976544 4666665 6777544444332 0000 0000011 111
Q ss_pred HHHHHHHHH---HhhCCCCCCCEEEecCCCcccHHhHH
Q psy12533 461 FKISCLRDI---MALFPPNTQPFYAGYGNKVNDVWSYQ 495 (567)
Q Consensus 461 fK~~~L~~i---~~lf~~~~~pf~agfGNr~tDv~aY~ 495 (567)
=|..+++.+ ... +. ...-..++|+..+|+.+-+
T Consensus 157 ~K~~~l~~~~~~~~~-~~-~~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 157 GKAEALKELYIRDEE-DI-DPDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp HHHHHHHHHHHHHHH-TH-TCCEEEEEESSGGGHHHHH
T ss_pred cHHHHHHHHHHHhhc-CC-CCCeEEEEECCHHHHHHhC
Confidence 388888888 221 11 2334679999999998743
No 130
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=96.35 E-value=0.021 Score=54.46 Aligned_cols=116 Identities=21% Similarity=0.258 Sum_probs=74.7
Q ss_pred eCCCeEEEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCC
Q psy12533 355 RWNDKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLP 434 (567)
Q Consensus 355 ~~~~kiVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP 434 (567)
..+-++|++|+|||++..+ ..-..+|+.++...++++|+++.-+|+.+. ...++.+++. .++.
T Consensus 22 ~~~v~~vv~D~Dgtl~~~~----------~~~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~--~~~~~~~~~~-----~gl~ 84 (170)
T TIGR01668 22 KVGIKGVVLDKDNTLVYPD----------HNEAYPALRDWIEELKAAGRKLLIVSNNAG--EQRAKAVEKA-----LGIP 84 (170)
T ss_pred HCCCCEEEEecCCccccCC----------CCCcChhHHHHHHHHHHcCCEEEEEeCCch--HHHHHHHHHH-----cCCE
Confidence 4577889999999999663 123578999999999999999999999762 2233444443 2332
Q ss_pred CCceecCCCchhhhhhhhhhccChhHHHHHHHHHHHhhCCCCCCCEEEecCCCc-ccHHhHHHcCCCCCCEEEEcCC
Q psy12533 435 EGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKV-NDVWSYQAVGIPLSRIFTINSR 510 (567)
Q Consensus 435 ~GPvl~spd~l~~al~rEvi~k~p~~fK~~~L~~i~~lf~~~~~pf~agfGNr~-tDv~aY~~vGIp~~rIF~In~~ 510 (567)
.+ + + ...++|+.|+..+ +.+ .-...- ..-+|++. +|+.+=+++|+.. ..|++.
T Consensus 85 ---~~------~---~--~~KP~p~~~~~~l-~~~----~~~~~~-~l~IGDs~~~Di~aA~~aGi~~---i~v~~g 138 (170)
T TIGR01668 85 ---VL------P---H--AVKPPGCAFRRAH-PEM----GLTSEQ-VAVVGDRLFTDVMGGNRNGSYT---ILVEPL 138 (170)
T ss_pred ---EE------c---C--CCCCChHHHHHHH-HHc----CCCHHH-EEEECCcchHHHHHHHHcCCeE---EEEccC
Confidence 11 0 0 1234556665433 222 111112 34789997 8999999999953 445554
No 131
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=96.35 E-value=0.012 Score=58.33 Aligned_cols=94 Identities=15% Similarity=0.212 Sum_probs=53.9
Q ss_pred chhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCC-ceecCCCchhhhhhhhhhccChhHHHHHHH
Q psy12533 113 QNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEG-PMLLNPTSLLNAFHTEVIEKKPQEFKISCL 191 (567)
Q Consensus 113 h~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~G-Plllsp~~l~~al~REvi~k~p~~fKi~~L 191 (567)
.+|+.++...++++|+++..+|+.+... .+..|+. .++..- .++.+.+.. ....++|+.|..
T Consensus 97 ~pg~~~~L~~L~~~g~~l~i~Tn~~~~~---~~~~l~~-----~~l~~~f~~i~~~~~~------~~~KP~p~~~~~--- 159 (229)
T PRK13226 97 FDGVEGMLQRLECAGCVWGIVTNKPEYL---ARLILPQ-----LGWEQRCAVLIGGDTL------AERKPHPLPLLV--- 159 (229)
T ss_pred CCCHHHHHHHHHHCCCeEEEECCCCHHH---HHHHHHH-----cCchhcccEEEecCcC------CCCCCCHHHHHH---
Confidence 4588889999999999999999976533 3445544 333210 011111111 011334444443
Q ss_pred HHHHHhCCCCCCCEEEecCCcccchhhhhhcCCCC
Q psy12533 192 RDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPL 226 (567)
Q Consensus 192 ~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~ 226 (567)
+...+.-...- ..-+|++.+|+.+=+++|+..
T Consensus 160 --~~~~l~~~p~~-~l~IGDs~~Di~aA~~aG~~~ 191 (229)
T PRK13226 160 --AAERIGVAPTD-CVYVGDDERDILAARAAGMPS 191 (229)
T ss_pred --HHHHhCCChhh-EEEeCCCHHHHHHHHHCCCcE
Confidence 33222211111 457899999999999999964
No 132
>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []. ; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....
Probab=96.35 E-value=0.0057 Score=58.27 Aligned_cols=51 Identities=31% Similarity=0.653 Sum_probs=37.8
Q ss_pred cEEEEecCCccccCCccccccccccccc--cchhHHHHHHHHHHCCceEEEEcc
Q psy12533 84 KIVISDIDGTITKSDVLGHVLPIMGKDW--AQNGVTRLFTKIKENGYKLLYLSA 135 (567)
Q Consensus 84 kiVISDIDGTITkSD~lG~il~~lGkDw--th~GVa~Ly~~i~~nGY~ilYLSa 135 (567)
||..||.||||.+... |...+.=-.|| -+++|.+..++++++||+|+-+|-
T Consensus 1 Kia~fD~DgTLi~~~s-~~~f~~~~~D~~~~~~~v~~~L~~l~~~Gy~IvIvTN 53 (159)
T PF08645_consen 1 KIAFFDLDGTLIKTKS-GKKFPKDPDDWKFFPPGVPEALRELHKKGYKIVIVTN 53 (159)
T ss_dssp SEEEE-SCTTTEE-ST-STTS-SSTCGGEEC-TTHHHHHHHHHHTTEEEEEEEE
T ss_pred CEEEEeCCCCccCCCC-CCcCcCCHHHhhhcchhHHHHHHHHHhcCCeEEEEeC
Confidence 6899999999888755 33333334665 577999999999999999999985
No 133
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=96.28 E-value=0.0081 Score=54.80 Aligned_cols=57 Identities=21% Similarity=0.359 Sum_probs=41.8
Q ss_pred cEEEEecCCccccCCc--cccccccccccccchhHHHHHHHHHHCCceEEEEccC-cccch
Q psy12533 84 KIVISDIDGTITKSDV--LGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSAR-AIGQS 141 (567)
Q Consensus 84 kiVISDIDGTITkSD~--lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaR-pi~~a 141 (567)
|++++|+||||+-.+. ..+ .+.++.+-.-+|+.++.+.++++|+++.-+|++ +...+
T Consensus 1 kli~~DlD~Tl~~~~~~~~~~-~~~~~~~~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~ 60 (128)
T TIGR01681 1 KVIVFDLDNTLWTGENIVVGE-DPIIDLEVTIKEIRDKLQTLKKNGFLLALASYNDDPHVA 60 (128)
T ss_pred CEEEEeCCCCCCCCCcccccC-CcchhhHHHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHH
Confidence 6899999999996642 111 122233345679999999999999999999997 55433
No 134
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=96.23 E-value=0.0055 Score=64.83 Aligned_cols=127 Identities=16% Similarity=0.227 Sum_probs=72.9
Q ss_pred chhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCC---ceecCCCchhhhhhhhhhccChhHHHHH
Q psy12533 113 QNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEG---PMLLNPTSLLNAFHTEVIEKKPQEFKIS 189 (567)
Q Consensus 113 h~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~G---Plllsp~~l~~al~REvi~k~p~~fKi~ 189 (567)
.+|+.++.+.++++||++.-+|+-....++..++ . .++... .+-.....+......++...+ -|.+
T Consensus 183 ~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~---~-----Lgld~~~an~lei~dg~ltg~v~g~iv~~k---~K~~ 251 (322)
T PRK11133 183 MPGLTELVLKLQALGWKVAIASGGFTYFADYLRD---K-----LRLDAAVANELEIMDGKLTGNVLGDIVDAQ---YKAD 251 (322)
T ss_pred ChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHH---H-----cCCCeEEEeEEEEECCEEEeEecCccCCcc---cHHH
Confidence 4588899999999999999999977655443333 3 222210 000111111111111122222 3888
Q ss_pred HHHHHHHhCCCCCCCEEEecCCcccchhhhhhcCCCCCCEEEEcCCCceeccccccccccHHhHHhhh
Q psy12533 190 CLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLSRIFTINSRGEVKHEMTQTFQSTYSNMSYLV 257 (567)
Q Consensus 190 ~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~~rIF~In~~g~~~~~~~~~~~~sY~~l~~~v 257 (567)
+|+.+++.+.-... -..++|+..+|+.+-+.+|+.. ..|++=+|+. ..... -++..|..+.
T Consensus 252 ~L~~la~~lgi~~~-qtIaVGDg~NDl~m~~~AGlgi----A~nAkp~Vk~-~Ad~~-i~~~~l~~~l 312 (322)
T PRK11133 252 TLTRLAQEYEIPLA-QTVAIGDGANDLPMIKAAGLGI----AYHAKPKVNE-QAQVT-IRHADLMGVL 312 (322)
T ss_pred HHHHHHHHcCCChh-hEEEEECCHHHHHHHHHCCCeE----EeCCCHHHHh-hCCEE-ecCcCHHHHH
Confidence 88888876542111 2678999999999999999854 3487755533 23222 2355555544
No 135
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=96.23 E-value=0.0076 Score=60.41 Aligned_cols=55 Identities=20% Similarity=0.325 Sum_probs=41.4
Q ss_pred EEEEecCCccccCCccccccccccccccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHh
Q psy12533 85 IVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQS 150 (567)
Q Consensus 85 iVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~ 150 (567)
+|++|+|||++.++- +..-.-+..-++.++++++|-+|+.+|||+.... +.+++.
T Consensus 3 li~tDlDGTLl~~~~--------~~~~~~~~~~~~i~~~~~~gi~fv~aTGR~~~~~---~~~~~~ 57 (249)
T TIGR01485 3 LLVSDLDNTLVDHTD--------GDNQALLRLNALLEDHRGEDSLLVYSTGRSPHSY---KELQKQ 57 (249)
T ss_pred EEEEcCCCcCcCCCC--------CChHHHHHHHHHHHHhhccCceEEEEcCCCHHHH---HHHHhc
Confidence 799999999997531 1222345677888888999999999999998765 555554
No 136
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=96.19 E-value=0.011 Score=59.78 Aligned_cols=69 Identities=16% Similarity=0.248 Sum_probs=46.7
Q ss_pred eEEEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCce
Q psy12533 359 KIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPM 438 (567)
Q Consensus 359 kiVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GPv 438 (567)
+.|+||+||||..++ + .-+|+.+..++++++|.+++++|+.+.-........|+. -|...+..=+
T Consensus 2 ~~~~~D~DGtl~~~~----------~--~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~---~g~~~~~~~i 66 (249)
T TIGR01457 2 KGYLIDLDGTMYKGK----------E--RIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLAS---FDIPATLETV 66 (249)
T ss_pred CEEEEeCCCceEcCC----------e--eCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHH---cCCCCChhhE
Confidence 679999999999773 1 235899999999999999999996443333334555554 2333333335
Q ss_pred ecCC
Q psy12533 439 LLNP 442 (567)
Q Consensus 439 l~sp 442 (567)
+++.
T Consensus 67 it~~ 70 (249)
T TIGR01457 67 FTAS 70 (249)
T ss_pred eeHH
Confidence 5543
No 137
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=96.18 E-value=0.0087 Score=57.62 Aligned_cols=47 Identities=17% Similarity=0.422 Sum_probs=38.9
Q ss_pred EEEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHCCceEEEEccCcccch
Q psy12533 360 IVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQS 416 (567)
Q Consensus 360 iVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa 416 (567)
+|++|+||||+.++. --..+.+.+...+++++|.+++.+|||+....
T Consensus 1 li~~D~DgTL~~~~~----------~~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~ 47 (204)
T TIGR01484 1 LLFFDLDGTLLDPNA----------HELSPETIEALERLREAGVKVVLVTGRSLAEI 47 (204)
T ss_pred CEEEeCcCCCcCCCC----------CcCCHHHHHHHHHHHHCCCEEEEECCCCHHHH
Confidence 489999999998641 12457888999999999999999999997655
No 138
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=96.17 E-value=0.0082 Score=60.16 Aligned_cols=56 Identities=20% Similarity=0.307 Sum_probs=42.5
Q ss_pred eEEEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHh
Q psy12533 359 KIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQS 425 (567)
Q Consensus 359 kiVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~ 425 (567)
-+|++|+|||+..++- +..-.-+..-++.++++++|-+|+.+|||+.... +..+..
T Consensus 2 ~li~tDlDGTLl~~~~--------~~~~~~~~~~~~i~~~~~~gi~fv~aTGR~~~~~---~~~~~~ 57 (249)
T TIGR01485 2 LLLVSDLDNTLVDHTD--------GDNQALLRLNALLEDHRGEDSLLVYSTGRSPHSY---KELQKQ 57 (249)
T ss_pred eEEEEcCCCcCcCCCC--------CChHHHHHHHHHHHHhhccCceEEEEcCCCHHHH---HHHHhc
Confidence 3799999999997531 1222446778888899999999999999998766 555544
No 139
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=96.16 E-value=0.03 Score=53.44 Aligned_cols=116 Identities=20% Similarity=0.222 Sum_probs=73.1
Q ss_pred cCCCcEEEEecCCccccCCccccccccccccccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCC
Q psy12533 80 RWNDKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLP 159 (567)
Q Consensus 80 ~~~~kiVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP 159 (567)
..+-++|++|+|||++..+. .-..+|+.++...++++|+++.-+|..+. ....+.+++. .++.
T Consensus 22 ~~~v~~vv~D~Dgtl~~~~~----------~~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~--~~~~~~~~~~-----~gl~ 84 (170)
T TIGR01668 22 KVGIKGVVLDKDNTLVYPDH----------NEAYPALRDWIEELKAAGRKLLIVSNNAG--EQRAKAVEKA-----LGIP 84 (170)
T ss_pred HCCCCEEEEecCCccccCCC----------CCcChhHHHHHHHHHHcCCEEEEEeCCch--HHHHHHHHHH-----cCCE
Confidence 35678999999999996631 23467999999999999999999999762 1233444444 2232
Q ss_pred CCceecCCCchhhhhhhhhhccChhHHHHHHHHHHHHhCCCCCCCEEEecCCcc-cchhhhhhcCCCCCCEEEEcCC
Q psy12533 160 EGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKV-NDVWSYQAVGIPLSRIFTINSR 235 (567)
Q Consensus 160 ~GPlllsp~~l~~al~REvi~k~p~~fKi~~L~~i~~lf~~~~~pf~agfGNr~-tDv~aY~~vGIp~~rIF~In~~ 235 (567)
.+ +. ....+|+.|+..+ ..+.-...- ..-+|++. +|+.+=+++|+.. ..|++.
T Consensus 85 ---~~------~~-----~~KP~p~~~~~~l-----~~~~~~~~~-~l~IGDs~~~Di~aA~~aGi~~---i~v~~g 138 (170)
T TIGR01668 85 ---VL------PH-----AVKPPGCAFRRAH-----PEMGLTSEQ-VAVVGDRLFTDVMGGNRNGSYT---ILVEPL 138 (170)
T ss_pred ---EE------cC-----CCCCChHHHHHHH-----HHcCCCHHH-EEEECCcchHHHHHHHHcCCeE---EEEccC
Confidence 01 00 1233455454433 222111111 45678987 8999999999953 445554
No 140
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=96.12 E-value=0.014 Score=59.10 Aligned_cols=55 Identities=18% Similarity=0.283 Sum_probs=42.3
Q ss_pred cEEEEecCCccccCCccccccccccccccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHh
Q psy12533 84 KIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQS 150 (567)
Q Consensus 84 kiVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~ 150 (567)
|.|+||+||||..++. .-+|+.+..++++++|.+++++|..+--..+.....|+.
T Consensus 2 ~~~~~D~DGtl~~~~~------------~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~ 56 (249)
T TIGR01457 2 KGYLIDLDGTMYKGKE------------RIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLAS 56 (249)
T ss_pred CEEEEeCCCceEcCCe------------eCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHH
Confidence 6899999999997741 234789999999999999999996443333445666666
No 141
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=96.11 E-value=0.024 Score=55.67 Aligned_cols=93 Identities=16% Similarity=0.179 Sum_probs=57.9
Q ss_pred cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecC-----CCchhhhhhhhhhccChhH-
Q psy12533 112 AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLN-----PTSLLNAFHTEVIEKKPQE- 185 (567)
Q Consensus 112 th~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GPllls-----p~~l~~al~REvi~k~p~~- 185 (567)
..+|+.++...++++|+++.-+|+... .....+|+.+ . +.-++..+ .+.+. .....|+.
T Consensus 71 l~pg~~e~l~~l~~~g~~~~IvS~~~~---~~i~~il~~~-----~-~~~~i~~n~~~~~~~~~~------~~~p~~~~~ 135 (214)
T TIGR03333 71 IREGFREFVAFINEHGIPFYVISGGMD---FFVYPLLEGI-----V-EKDRIYCNEADFSNEYIH------IDWPHPCDG 135 (214)
T ss_pred ccccHHHHHHHHHHCCCeEEEECCCcH---HHHHHHHHhh-----C-CcccEEeceeEeeCCeeE------EeCCCCCcc
Confidence 345888999999999999999999743 3445555542 1 11233222 22211 01122333
Q ss_pred --------HHHHHHHHHHHhCCCCCCCEEEecCCcccchhhhhhcCC
Q psy12533 186 --------FKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGI 224 (567)
Q Consensus 186 --------fKi~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGI 224 (567)
.|..+++.++.. . .. ...+|+..+|+.+=+.+|+
T Consensus 136 ~~~~~cg~~K~~~l~~~~~~--~--~~-~i~iGDg~~D~~~a~~Ad~ 177 (214)
T TIGR03333 136 TCQNQCGCCKPSLIRKLSEP--N--DY-HIVIGDSVTDVEAAKQSDL 177 (214)
T ss_pred ccccCCCCCHHHHHHHHhhc--C--Cc-EEEEeCCHHHHHHHHhCCe
Confidence 388888887752 1 22 4578999999999888887
No 142
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=96.10 E-value=0.01 Score=59.11 Aligned_cols=116 Identities=20% Similarity=0.203 Sum_probs=78.3
Q ss_pred cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhccCh-hHHHHHH
Q psy12533 387 AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKP-QEFKISC 465 (567)
Q Consensus 387 ~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GPvl~spd~l~~al~rEvi~k~p-~~fK~~~ 465 (567)
..||+.++...++++|++++-+||-+....+...+-|.- ..=-+-.+...|+. |...++-..- ..-|...
T Consensus 78 l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~------d~~~an~l~~~dG~---ltG~v~g~~~~~~~K~~~ 148 (212)
T COG0560 78 LTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGI------DYVVANELEIDDGK---LTGRVVGPICDGEGKAKA 148 (212)
T ss_pred CCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCC------chheeeEEEEeCCE---EeceeeeeecCcchHHHH
Confidence 467999999999999999999999998877666665532 00012222223321 1122221111 2458888
Q ss_pred HHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCCCCCEEEEcCCCccccc
Q psy12533 466 LRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLSRIFTINSRGEVKHE 516 (567)
Q Consensus 466 L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~~rIF~In~~g~~~~~ 516 (567)
|+++....+-... =..+||+..+|.-+-+.+|.+ +.+||++++...
T Consensus 149 l~~~~~~~g~~~~-~~~a~gDs~nDlpml~~ag~~----ia~n~~~~l~~~ 194 (212)
T COG0560 149 LRELAAELGIPLE-ETVAYGDSANDLPMLEAAGLP----IAVNPKPKLRAL 194 (212)
T ss_pred HHHHHHHcCCCHH-HeEEEcCchhhHHHHHhCCCC----eEeCcCHHHHHH
Confidence 8888875543211 256999999999999999998 489999888654
No 143
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=96.08 E-value=0.018 Score=56.47 Aligned_cols=93 Identities=16% Similarity=0.199 Sum_probs=58.6
Q ss_pred cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceec-----CCCchhhhhhhhhhccChhH-
Q psy12533 387 AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLL-----NPTSLLNAFHTEVIEKKPQE- 460 (567)
Q Consensus 387 ~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GPvl~-----spd~l~~al~rEvi~k~p~~- 460 (567)
..||+.+++..++++|+++.-+|+... .....+|+. +.+ .-++.. ..+.+. ...+.|+.
T Consensus 71 l~pg~~e~l~~l~~~g~~~~IvS~~~~---~~i~~il~~-----~~~-~~~i~~n~~~~~~~~~~------~~~p~~~~~ 135 (214)
T TIGR03333 71 IREGFREFVAFINEHGIPFYVISGGMD---FFVYPLLEG-----IVE-KDRIYCNEADFSNEYIH------IDWPHPCDG 135 (214)
T ss_pred ccccHHHHHHHHHHCCCeEEEECCCcH---HHHHHHHHh-----hCC-cccEEeceeEeeCCeeE------EeCCCCCcc
Confidence 457888999999999999999999744 334455554 211 123322 222211 11123333
Q ss_pred --------HHHHHHHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCC
Q psy12533 461 --------FKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGI 499 (567)
Q Consensus 461 --------fK~~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGI 499 (567)
.|..+++.++. . ... ...+|+..+|+.+=+.+|+
T Consensus 136 ~~~~~cg~~K~~~l~~~~~---~-~~~-~i~iGDg~~D~~~a~~Ad~ 177 (214)
T TIGR03333 136 TCQNQCGCCKPSLIRKLSE---P-NDY-HIVIGDSVTDVEAAKQSDL 177 (214)
T ss_pred ccccCCCCCHHHHHHHHhh---c-CCc-EEEEeCCHHHHHHHHhCCe
Confidence 38888888775 1 222 3578999999999998887
No 144
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=96.06 E-value=0.016 Score=55.96 Aligned_cols=111 Identities=19% Similarity=0.345 Sum_probs=66.1
Q ss_pred CcEEEEecCCccccCCcccccccccccc----ccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccC
Q psy12533 83 DKIVISDIDGTITKSDVLGHVLPIMGKD----WAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTL 158 (567)
Q Consensus 83 ~kiVISDIDGTITkSD~lG~il~~lGkD----wth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~L 158 (567)
-|++||||||++|.--. ++..-|.- -++.|.+ .+.++++|+++..+|+.+... ++..|+. .++
T Consensus 7 i~~~v~d~dGv~tdg~~---~~~~~g~~~~~~~~~D~~~--~~~L~~~Gi~laIiT~k~~~~---~~~~l~~-----lgi 73 (169)
T TIGR02726 7 IKLVILDVDGVMTDGRI---VINDEGIESRNFDIKDGMG--VIVLQLCGIDVAIITSKKSGA---VRHRAEE-----LKI 73 (169)
T ss_pred CeEEEEeCceeeECCeE---EEcCCCcEEEEEecchHHH--HHHHHHCCCEEEEEECCCcHH---HHHHHHH-----CCC
Confidence 68899999999996421 12222322 1233333 344678999999999986654 4666766 444
Q ss_pred CCCceecCCCchhhhhhhhhhccChhHHHHHHHHHHHHhCCCCCCCEEEecCCcccchhhhhhcCCCC
Q psy12533 159 PEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPL 226 (567)
Q Consensus 159 P~GPlllsp~~l~~al~REvi~k~p~~fKi~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~ 226 (567)
. .+|.+ +..+|+.++ .+...+.-...- .+.||+..+|+.+-+.+|++-
T Consensus 74 ~---------~~f~~-----~kpkp~~~~-----~~~~~l~~~~~e-v~~iGD~~nDi~~~~~ag~~~ 121 (169)
T TIGR02726 74 K---------RFHEG-----IKKKTEPYA-----QMLEEMNISDAE-VCYVGDDLVDLSMMKRVGLAV 121 (169)
T ss_pred c---------EEEec-----CCCCHHHHH-----HHHHHcCcCHHH-EEEECCCHHHHHHHHHCCCeE
Confidence 3 12211 234454333 333322211112 678999999999999999763
No 145
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=96.05 E-value=0.023 Score=58.22 Aligned_cols=93 Identities=13% Similarity=0.171 Sum_probs=53.5
Q ss_pred chhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCC--CceecCCCchhhhhhhhhhccChhHHHHHH
Q psy12533 388 QNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPE--GPMLLNPTSLLNAFHTEVIEKKPQEFKISC 465 (567)
Q Consensus 388 h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~--GPvl~spd~l~~al~rEvi~k~p~~fK~~~ 465 (567)
.+|+.++.+.++++||++.-+|+.+... .+..|.. .++.. ..++. .+..- ...++|+.|+..+
T Consensus 103 ~~g~~e~L~~Lk~~g~~l~ivTn~~~~~---~~~~l~~-----~~i~~~f~~i~~-~d~~~------~~Kp~p~~~~~~~ 167 (272)
T PRK13223 103 YPGVRDTLKWLKKQGVEMALITNKPERF---VAPLLDQ-----MKIGRYFRWIIG-GDTLP------QKKPDPAALLFVM 167 (272)
T ss_pred CCCHHHHHHHHHHCCCeEEEEECCcHHH---HHHHHHH-----cCcHhhCeEEEe-cCCCC------CCCCCcHHHHHHH
Confidence 5788999999999999999999976532 2333333 22211 11222 22110 0123334444433
Q ss_pred HHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCCC
Q psy12533 466 LRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPL 501 (567)
Q Consensus 466 L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~ 501 (567)
+.+ .+ ...- ...+|++.+|+.+=+++|+..
T Consensus 168 -~~~-g~---~~~~-~l~IGD~~~Di~aA~~aGi~~ 197 (272)
T PRK13223 168 -KMA-GV---PPSQ-SLFVGDSRSDVLAAKAAGVQC 197 (272)
T ss_pred -HHh-CC---ChhH-EEEECCCHHHHHHHHHCCCeE
Confidence 211 11 1112 347999999999999999974
No 146
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=96.04 E-value=0.03 Score=53.72 Aligned_cols=25 Identities=20% Similarity=0.267 Sum_probs=18.8
Q ss_pred chhHHHHHHHHHHCCceEEEEccCc
Q psy12533 113 QNGVTRLFTKIKENGYKLLYLSARA 137 (567)
Q Consensus 113 h~GVa~Ly~~i~~nGY~ilYLSaRp 137 (567)
.+|+.++.+.++++||++.-+|+-+
T Consensus 107 ~~g~~~~l~~L~~~g~~~~i~Sn~~ 131 (203)
T TIGR02252 107 YPDAIKLLKDLRERGLILGVISNFD 131 (203)
T ss_pred CcCHHHHHHHHHHCCCEEEEEeCCc
Confidence 3577777788888888888888754
No 147
>PLN02887 hydrolase family protein
Probab=96.02 E-value=0.0073 Score=68.71 Aligned_cols=64 Identities=16% Similarity=0.203 Sum_probs=50.4
Q ss_pred eeEEEEecCCCcEEEEecCCccccCCccccccccccccccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHh
Q psy12533 73 KCYLFKWRWNDKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQS 150 (567)
Q Consensus 73 ~~~iylw~~~~kiVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~ 150 (567)
++.+-.+.+.-|+|+||+||||..++- . ..+...+..++++++|++|+.+|||+...+ +.+++.
T Consensus 298 ~~~~~~~~~~iKLIa~DLDGTLLn~d~--~---------Is~~t~eAI~kl~ekGi~~vIATGR~~~~i---~~~l~~ 361 (580)
T PLN02887 298 EGSLRFYKPKFSYIFCDMDGTLLNSKS--Q---------ISETNAKALKEALSRGVKVVIATGKARPAV---IDILKM 361 (580)
T ss_pred hcchhhhccCccEEEEeCCCCCCCCCC--c---------cCHHHHHHHHHHHHCCCeEEEEcCCCHHHH---HHHHHH
Confidence 355666788899999999999998752 1 234567889999999999999999998755 556655
No 148
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=96.01 E-value=0.025 Score=53.01 Aligned_cols=100 Identities=15% Similarity=0.098 Sum_probs=53.2
Q ss_pred hhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCC--ceecCC-----Cchhhhhhhh--hhccChh
Q psy12533 114 NGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEG--PMLLNP-----TSLLNAFHTE--VIEKKPQ 184 (567)
Q Consensus 114 ~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~G--Plllsp-----~~l~~al~RE--vi~k~p~ 184 (567)
+|+.++.+.++++|+++..+|+..... .+..++. .+++.= .++.++ ++.+.....+ +....+.
T Consensus 75 ~g~~~ll~~l~~~g~~~~i~S~~~~~~---~~~~l~~-----~~l~~~f~~i~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 146 (188)
T TIGR01489 75 PGFKEFIAFIKEHGIDFIVISDGNDFF---IDPVLEG-----IGEKDVFIEIYSNPASFDNDGRHIVWPHHCHGCCSCPC 146 (188)
T ss_pred ccHHHHHHHHHHcCCcEEEEeCCcHHH---HHHHHHH-----cCChhheeEEeccCceECCCCcEEEecCCCCccCcCCC
Confidence 366677788888999999999865433 3444443 222210 122221 1111111000 0001111
Q ss_pred -HHHHHHHHHHHHhCCCCCCCEEEecCCcccchhhhhhcCCC
Q psy12533 185 -EFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIP 225 (567)
Q Consensus 185 -~fKi~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp 225 (567)
.-|.++++.++...+ .. ...+|+..+|+.|=+++++-
T Consensus 147 g~~K~~~~~~~~~~~~--~~--~i~iGD~~~D~~aa~~~d~~ 184 (188)
T TIGR01489 147 GCCKGKVIHKLSEPKY--QH--IIYIGDGVTDVCPAKLSDVV 184 (188)
T ss_pred CCCHHHHHHHHHhhcC--ce--EEEECCCcchhchHhcCCcc
Confidence 147778888776532 12 45668999999998777653
No 149
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=96.01 E-value=0.012 Score=56.66 Aligned_cols=47 Identities=17% Similarity=0.422 Sum_probs=38.3
Q ss_pred EEEEecCCccccCCccccccccccccccchhHHHHHHHHHHCCceEEEEccCcccch
Q psy12533 85 IVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQS 141 (567)
Q Consensus 85 iVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a 141 (567)
+|++|+||||+.++. --..+.+.+..++++++|.+++.+|||+....
T Consensus 1 li~~D~DgTL~~~~~----------~~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~ 47 (204)
T TIGR01484 1 LLFFDLDGTLLDPNA----------HELSPETIEALERLREAGVKVVLVTGRSLAEI 47 (204)
T ss_pred CEEEeCcCCCcCCCC----------CcCCHHHHHHHHHHHHCCCEEEEECCCCHHHH
Confidence 489999999998642 11346788999999999999999999997654
No 150
>PRK06769 hypothetical protein; Validated
Probab=95.98 E-value=0.043 Score=52.56 Aligned_cols=124 Identities=17% Similarity=0.156 Sum_probs=70.9
Q ss_pred CeEEEEecCCccccCCcccccccccCc-CC-cchhHHHHHHHHHHCCceEEEEccCcccchH--HHHHHHHhcccCCccC
Q psy12533 358 DKIVISDIDGTITKSDVLGHVLPIMGK-DW-AQNGVTRLFTKIKENGYKLLYLSARAIGQSR--VTREYLQSVKQEDLTL 433 (567)
Q Consensus 358 ~kiVIsDIDGTiTkSD~~G~~~~~~Gk-Dw-~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~--~Tr~~L~~~~Q~~~~l 433 (567)
-|++++|-||||- ||-. .... ++ .-|||.+++..++++||++.-+|.-+..+.. ..+.++..+.. .++
T Consensus 4 ~~~~~~d~d~~~~-----~~~~-~~~~~~~~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~--~g~ 75 (173)
T PRK06769 4 IQAIFIDRDGTIG-----GDTT-IHYPGSFTLFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKG--FGF 75 (173)
T ss_pred CcEEEEeCCCccc-----CCCC-CCCHHHeEECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHh--CCc
Confidence 4789999999994 2211 1121 23 5789999999999999999999987532210 01122222222 444
Q ss_pred CCCceecCCCchhhhhhhhh--hccChhHHHHHHHHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCCC
Q psy12533 434 PEGPMLLNPTSLLNAFHTEV--IEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPL 501 (567)
Q Consensus 434 P~GPvl~spd~l~~al~rEv--i~k~p~~fK~~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~ 501 (567)
.. ++.+.... ..++ -.++|+.|+..+ +.+.. .+ ... .-+|++.+|+.+=+++|+..
T Consensus 76 ~~--~~~~~~~~----~~~~~~~KP~p~~~~~~~-~~l~~--~p-~~~--i~IGD~~~Di~aA~~aGi~~ 133 (173)
T PRK06769 76 DD--IYLCPHKH----GDGCECRKPSTGMLLQAA-EKHGL--DL-TQC--AVIGDRWTDIVAAAKVNATT 133 (173)
T ss_pred CE--EEECcCCC----CCCCCCCCCCHHHHHHHH-HHcCC--CH-HHe--EEEcCCHHHHHHHHHCCCeE
Confidence 32 22221100 0111 244567777554 22211 11 233 35678899999999999963
No 151
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=95.90 E-value=0.022 Score=59.91 Aligned_cols=67 Identities=16% Similarity=0.193 Sum_probs=49.0
Q ss_pred EeeeCCCeEEEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCc
Q psy12533 352 FKWRWNDKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDL 431 (567)
Q Consensus 352 ylw~~~~kiVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~ 431 (567)
++|.. .++|+||+||||..+.-..+ -..||+.++...++++|+++.-.|+++...+ ...|+. .
T Consensus 121 ~~~~~-~kvIvFDLDgTLi~~~~~v~--------irdPgV~EaL~~LkekGikLaIaTS~~Re~v---~~~L~~-----l 183 (301)
T TIGR01684 121 KVFEP-PHVVVFDLDSTLITDEEPVR--------IRDPRIYDSLTELKKRGCILVLWSYGDRDHV---VESMRK-----V 183 (301)
T ss_pred ccccc-ceEEEEecCCCCcCCCCccc--------cCCHHHHHHHHHHHHCCCEEEEEECCCHHHH---HHHHHH-----c
Confidence 44543 56999999999998742111 1258999999999999999999998765544 356666 6
Q ss_pred cCCC
Q psy12533 432 TLPE 435 (567)
Q Consensus 432 ~lP~ 435 (567)
+|..
T Consensus 184 GLd~ 187 (301)
T TIGR01684 184 KLDR 187 (301)
T ss_pred CCCc
Confidence 6653
No 152
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=95.90 E-value=0.021 Score=56.69 Aligned_cols=91 Identities=10% Similarity=0.066 Sum_probs=53.9
Q ss_pred chhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCC--CceecCCCchhhhhhhhhh--ccChhHHHH
Q psy12533 113 QNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPE--GPMLLNPTSLLNAFHTEVI--EKKPQEFKI 188 (567)
Q Consensus 113 h~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~--GPlllsp~~l~~al~REvi--~k~p~~fKi 188 (567)
.+|+.++...++++||++.-+|+-+.. ..+..|+. .+|-+ --++.+. ++. .++|+.|..
T Consensus 95 ~~g~~e~L~~Lk~~g~~~~i~Tn~~~~---~~~~~l~~-----~~l~~~fd~iv~s~---------~~~~~KP~p~~~~~ 157 (224)
T PRK14988 95 REDTVPFLEALKASGKRRILLTNAHPH---NLAVKLEH-----TGLDAHLDLLLSTH---------TFGYPKEDQRLWQA 157 (224)
T ss_pred CCCHHHHHHHHHhCCCeEEEEeCcCHH---HHHHHHHH-----CCcHHHCCEEEEee---------eCCCCCCCHHHHHH
Confidence 369999999999999999999985433 33444443 22210 1122222 122 334455555
Q ss_pred HHHHHHHHhCCCCCCCEEEecCCcccchhhhhhcCCCC
Q psy12533 189 SCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPL 226 (567)
Q Consensus 189 ~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~ 226 (567)
.+ +.+ .+ ++ .- ...+|++..|+.+=+++|+..
T Consensus 158 ~~-~~~-~~-~p--~~-~l~igDs~~di~aA~~aG~~~ 189 (224)
T PRK14988 158 VA-EHT-GL-KA--ER-TLFIDDSEPILDAAAQFGIRY 189 (224)
T ss_pred HH-HHc-CC-Ch--HH-EEEEcCCHHHHHHHHHcCCeE
Confidence 44 111 11 11 11 456899999999999999975
No 153
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=95.84 E-value=0.046 Score=52.47 Aligned_cols=92 Identities=17% Similarity=0.171 Sum_probs=51.2
Q ss_pred chhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCC--CCceecCCCchhhhhhhhhhccChhHHHHHH
Q psy12533 388 QNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLP--EGPMLLNPTSLLNAFHTEVIEKKPQEFKISC 465 (567)
Q Consensus 388 h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP--~GPvl~spd~l~~al~rEvi~k~p~~fK~~~ 465 (567)
.||+.++.+.++++||++.-+|+-+.. .+..|+. .++. --.++.+.+ . ....++|+.|...+
T Consensus 107 ~~g~~~~l~~L~~~g~~~~i~Sn~~~~----~~~~l~~-----~~l~~~fd~i~~s~~-~------~~~KP~~~~~~~~~ 170 (203)
T TIGR02252 107 YPDAIKLLKDLRERGLILGVISNFDSR----LRGLLEA-----LGLLEYFDFVVTSYE-V------GAEKPDPKIFQEAL 170 (203)
T ss_pred CcCHHHHHHHHHHCCCEEEEEeCCchh----HHHHHHH-----CCcHHhcceEEeecc-c------CCCCCCHHHHHHHH
Confidence 578888888899999998888875432 2444544 2321 112332221 1 01133445555443
Q ss_pred HHHHHhhCCCCCCCEEEecCCCc-ccHHhHHHcCCCC
Q psy12533 466 LRDIMALFPPNTQPFYAGYGNKV-NDVWSYQAVGIPL 501 (567)
Q Consensus 466 L~~i~~lf~~~~~pf~agfGNr~-tDv~aY~~vGIp~ 501 (567)
+.+ +-...- ..-+|++. +|+.+=+++|+..
T Consensus 171 -~~~----~~~~~~-~~~IgD~~~~Di~~A~~aG~~~ 201 (203)
T TIGR02252 171 -ERA----GISPEE-ALHIGDSLRNDYQGARAAGWRA 201 (203)
T ss_pred -HHc----CCChhH-EEEECCCchHHHHHHHHcCCee
Confidence 222 111111 34688886 7999999999863
No 154
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=95.83 E-value=0.018 Score=57.28 Aligned_cols=93 Identities=10% Similarity=0.066 Sum_probs=55.0
Q ss_pred chhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCC--CceecCCCchhhhhhhhhhccChhHHHHHH
Q psy12533 388 QNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPE--GPMLLNPTSLLNAFHTEVIEKKPQEFKISC 465 (567)
Q Consensus 388 h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~--GPvl~spd~l~~al~rEvi~k~p~~fK~~~ 465 (567)
.+|+.++...++++||++.-+|+-+... .+..|+. .+|-+ --++++. ..- ...++|+.|...+
T Consensus 95 ~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~---~~~~l~~-----~~l~~~fd~iv~s~-~~~------~~KP~p~~~~~~~ 159 (224)
T PRK14988 95 REDTVPFLEALKASGKRRILLTNAHPHN---LAVKLEH-----TGLDAHLDLLLSTH-TFG------YPKEDQRLWQAVA 159 (224)
T ss_pred CCCHHHHHHHHHhCCCeEEEEeCcCHHH---HHHHHHH-----CCcHHHCCEEEEee-eCC------CCCCCHHHHHHHH
Confidence 4799999999999999999999854333 3444443 22210 1122221 110 1134456666554
Q ss_pred HHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCCC
Q psy12533 466 LRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPL 501 (567)
Q Consensus 466 L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~ 501 (567)
=+ + .+ ++ .. ...+|++..|+.+=+++|+..
T Consensus 160 ~~-~-~~-~p-~~--~l~igDs~~di~aA~~aG~~~ 189 (224)
T PRK14988 160 EH-T-GL-KA-ER--TLFIDDSEPILDAAAQFGIRY 189 (224)
T ss_pred HH-c-CC-Ch-HH--EEEEcCCHHHHHHHHHcCCeE
Confidence 11 1 11 11 12 346899999999999999975
No 155
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=95.76 E-value=0.022 Score=65.77 Aligned_cols=54 Identities=24% Similarity=0.404 Sum_probs=41.6
Q ss_pred CeEEEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHh
Q psy12533 358 DKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQS 425 (567)
Q Consensus 358 ~kiVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~ 425 (567)
.|+|++|+||||+.++. .. .+-..+..++++++|++|+-+|||+.... +.+++.
T Consensus 416 ~KLIfsDLDGTLLd~d~---------~i--~~~t~eAL~~L~ekGI~~VIATGRs~~~i---~~l~~~ 469 (694)
T PRK14502 416 KKIVYTDLDGTLLNPLT---------YS--YSTALDALRLLKDKELPLVFCSAKTMGEQ---DLYRNE 469 (694)
T ss_pred eeEEEEECcCCCcCCCC---------cc--CHHHHHHHHHHHHcCCeEEEEeCCCHHHH---HHHHHH
Confidence 47899999999998752 12 22357889999999999999999998765 444444
No 156
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=95.76 E-value=0.023 Score=52.05 Aligned_cols=87 Identities=17% Similarity=0.229 Sum_probs=52.0
Q ss_pred hhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhh-ccChhHHHHHHHH
Q psy12533 114 NGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVI-EKKPQEFKISCLR 192 (567)
Q Consensus 114 ~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GPlllsp~~l~~al~REvi-~k~p~~fKi~~L~ 192 (567)
+|+.++...++++|+++.-+|+++...+....+.+ +. .... .++++.+ +. .++|+.|...|
T Consensus 67 ~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~--l~----~~f~-~i~~~~~---------~~~Kp~~~~~~~~~-- 128 (154)
T TIGR01549 67 RGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH--LG----DYFD-LILGSDE---------FGAKPEPEIFLAAL-- 128 (154)
T ss_pred cCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH--HH----hcCc-EEEecCC---------CCCCcCHHHHHHHH--
Confidence 69999999999999999999998877665544442 11 1111 2333332 11 22333343333
Q ss_pred HHHHhCCCCCCCEEEecCCcccchhhhhhcC
Q psy12533 193 DIMALFPPNTQPFYAGYGNKVNDVWSYQAVG 223 (567)
Q Consensus 193 ~i~~lf~~~~~pf~agfGNr~tDv~aY~~vG 223 (567)
..+.-.. . ..-+|++..|+.+=+++|
T Consensus 129 ---~~~~~~~-~-~l~iGDs~~Di~aa~~aG 154 (154)
T TIGR01549 129 ---ESLGLPP-E-VLHVGDNLNDIEGARNAG 154 (154)
T ss_pred ---HHcCCCC-C-EEEEeCCHHHHHHHHHcc
Confidence 3332212 2 456888899998887776
No 157
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=95.75 E-value=0.027 Score=58.23 Aligned_cols=94 Identities=16% Similarity=0.224 Sum_probs=51.7
Q ss_pred chhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCC-ceecCCCchhhhhhhhhhccCh--hHHHHH
Q psy12533 113 QNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEG-PMLLNPTSLLNAFHTEVIEKKP--QEFKIS 189 (567)
Q Consensus 113 h~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~G-Plllsp~~l~~al~REvi~k~p--~~fKi~ 189 (567)
.|||.++...++++||++.-+|+.+.... ...|+.. .+..+..+ .++ ..+ ++...+| +.|...
T Consensus 146 ~pGv~elL~~L~~~g~~l~IvTn~~~~~~---~~~l~~~--~~~~~~~~~~~v-~~~--------~~~~~KP~p~~~~~a 211 (286)
T PLN02779 146 RPGVLRLMDEALAAGIKVAVCSTSNEKAV---SKIVNTL--LGPERAQGLDVF-AGD--------DVPKKKPDPDIYNLA 211 (286)
T ss_pred hhhHHHHHHHHHHCCCeEEEEeCCCHHHH---HHHHHHh--ccccccCceEEE-ecc--------ccCCCCCCHHHHHHH
Confidence 34888888889999999999999654333 3333331 00112211 122 111 2223344 344443
Q ss_pred HHHHHHHhCCCCCCCEEEecCCcccchhhhhhcCCCC
Q psy12533 190 CLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPL 226 (567)
Q Consensus 190 ~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~ 226 (567)
+ ..+.-...- ...+|++.+|+.+=+++|++.
T Consensus 212 ~-----~~~~~~p~~-~l~IGDs~~Di~aA~~aG~~~ 242 (286)
T PLN02779 212 A-----ETLGVDPSR-CVVVEDSVIGLQAAKAAGMRC 242 (286)
T ss_pred H-----HHhCcChHH-EEEEeCCHHhHHHHHHcCCEE
Confidence 3 222111111 445889999999999999864
No 158
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=95.73 E-value=0.03 Score=57.89 Aligned_cols=94 Identities=15% Similarity=0.245 Sum_probs=53.2
Q ss_pred chhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCC-ceecCCCchhhhhhhhhh--ccChhHHHHH
Q psy12533 388 QNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEG-PMLLNPTSLLNAFHTEVI--EKKPQEFKIS 464 (567)
Q Consensus 388 h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~G-Pvl~spd~l~~al~rEvi--~k~p~~fK~~ 464 (567)
.||+.++...++++||++.-+|+.+.... ...|... .+..+..+ .++ ..+ ++. .+.|+.|...
T Consensus 146 ~pGv~elL~~L~~~g~~l~IvTn~~~~~~---~~~l~~~--~~~~~~~~~~~v-~~~--------~~~~~KP~p~~~~~a 211 (286)
T PLN02779 146 RPGVLRLMDEALAAGIKVAVCSTSNEKAV---SKIVNTL--LGPERAQGLDVF-AGD--------DVPKKKPDPDIYNLA 211 (286)
T ss_pred hhhHHHHHHHHHHCCCeEEEEeCCCHHHH---HHHHHHh--ccccccCceEEE-ecc--------ccCCCCCCHHHHHHH
Confidence 46888899999999999999999654333 3333331 00112211 112 111 122 3344566554
Q ss_pred HHHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCCC
Q psy12533 465 CLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPL 501 (567)
Q Consensus 465 ~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~ 501 (567)
+ +.+. + .+ .. ..-+|++.+|+.|=+++|++.
T Consensus 212 ~-~~~~-~-~p-~~--~l~IGDs~~Di~aA~~aG~~~ 242 (286)
T PLN02779 212 A-ETLG-V-DP-SR--CVVVEDSVIGLQAAKAAGMRC 242 (286)
T ss_pred H-HHhC-c-Ch-HH--EEEEeCCHHhHHHHHHcCCEE
Confidence 3 2111 1 11 12 345899999999999999973
No 159
>PRK06769 hypothetical protein; Validated
Probab=95.64 E-value=0.065 Score=51.30 Aligned_cols=122 Identities=17% Similarity=0.131 Sum_probs=68.9
Q ss_pred CCcEEEEecCCccccCCccccccccccc-cc-cchhHHHHHHHHHHCCceEEEEccCcccch-----HHHHHHHHhcccC
Q psy12533 82 NDKIVISDIDGTITKSDVLGHVLPIMGK-DW-AQNGVTRLFTKIKENGYKLLYLSARAIGQS-----RVTREYLQSVKQE 154 (567)
Q Consensus 82 ~~kiVISDIDGTITkSD~lG~il~~lGk-Dw-th~GVa~Ly~~i~~nGY~ilYLSaRpi~~a-----~~Tr~~L~~~~q~ 154 (567)
+-|++++|.||||-.- .+ .... ++ .-+||.++...++++||++.-+|+.+-.+. ..+..-|+.
T Consensus 3 ~~~~~~~d~d~~~~~~--~~----~~~~~~~~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~---- 72 (173)
T PRK06769 3 NIQAIFIDRDGTIGGD--TT----IHYPGSFTLFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKG---- 72 (173)
T ss_pred CCcEEEEeCCCcccCC--CC----CCCHHHeEECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHh----
Confidence 3478999999999422 11 1111 22 457999999999999999999998653211 111222333
Q ss_pred CccCCCCceecCCCchhhhhhhhh--hccChhHHHHHHHHHHHHhCCCCCCCEEEecCCcccchhhhhhcCCCC
Q psy12533 155 DLTLPEGPMLLNPTSLLNAFHTEV--IEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPL 226 (567)
Q Consensus 155 ~~~LP~GPlllsp~~l~~al~REv--i~k~p~~fKi~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~ 226 (567)
.++.. ++.+.... ..++ -.++|+.|+..+ +.+ .+ .+ .. ..-+|++.+|+.+=+++|+..
T Consensus 73 -~g~~~--~~~~~~~~----~~~~~~~KP~p~~~~~~~-~~l-~~-~p-~~--~i~IGD~~~Di~aA~~aGi~~ 133 (173)
T PRK06769 73 -FGFDD--IYLCPHKH----GDGCECRKPSTGMLLQAA-EKH-GL-DL-TQ--CAVIGDRWTDIVAAAKVNATT 133 (173)
T ss_pred -CCcCE--EEECcCCC----CCCCCCCCCCHHHHHHHH-HHc-CC-CH-HH--eEEEcCCHHHHHHHHHCCCeE
Confidence 33432 22221100 0011 234555566444 222 11 11 22 334678899999999999964
No 160
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=95.61 E-value=0.037 Score=58.28 Aligned_cols=120 Identities=18% Similarity=0.198 Sum_probs=72.3
Q ss_pred CeEEEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCC-
Q psy12533 358 DKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEG- 436 (567)
Q Consensus 358 ~kiVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~G- 436 (567)
.++|+||+||||..++--.+ -..||+.++...++++|+++.-+|+.+...+ +..|.. .+++.=
T Consensus 128 ~~~i~~D~D~TL~~~~~~v~--------irdp~V~EtL~eLkekGikLaIvTNg~Re~v---~~~Le~-----lgL~~yF 191 (303)
T PHA03398 128 PHVIVFDLDSTLITDEEPVR--------IRDPFVYDSLDELKERGCVLVLWSYGNREHV---VHSLKE-----TKLEGYF 191 (303)
T ss_pred ccEEEEecCCCccCCCCccc--------cCChhHHHHHHHHHHCCCEEEEEcCCChHHH---HHHHHH-----cCCCccc
Confidence 58999999999998842111 1248999999999999999999997654444 666766 666531
Q ss_pred -ceecCCCchhhhhhhhhhccChhHHHHHHHHHHHhhCCCCCCCEEEecCC------CcccHHhHHH-cCCCCCCEEE
Q psy12533 437 -PMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGN------KVNDVWSYQA-VGIPLSRIFT 506 (567)
Q Consensus 437 -Pvl~spd~l~~al~rEvi~k~p~~fK~~~L~~i~~lf~~~~~pf~agfGN------r~tDv~aY~~-vGIp~~rIF~ 506 (567)
.++++.+....+-.||..+.+- | ..| ...|||.-... .++.|.-|.+ .||.--+.+|
T Consensus 192 DvII~~g~i~~k~~~~~~~d~~~---~--------~~~--~~~~f~~d~~~~~~lPKSprvVl~yL~~~gvn~~KtiT 256 (303)
T PHA03398 192 DIIICGGRKAGEYSRRVIVDNKY---K--------MVF--VKKPFYLDVTDVKNLPKSPRVVLWYLRKKGVNYFKTIT 256 (303)
T ss_pred cEEEECCCcccccccceeecccc---e--------eEE--ecCceeEeCCcccCCCCCCeehHHHHHHcCcceeccEE
Confidence 3555554444343333333311 1 111 13467765542 2445555544 4666555444
No 161
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=95.54 E-value=0.034 Score=54.96 Aligned_cols=123 Identities=15% Similarity=0.179 Sum_probs=75.5
Q ss_pred cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecC-----CCchhhhhhhhhhccChhHH
Q psy12533 387 AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLN-----PTSLLNAFHTEVIEKKPQEF 461 (567)
Q Consensus 387 ~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GPvl~s-----pd~l~~al~rEvi~k~p~~f 461 (567)
..||+.++.+.++++| +++-+|+-... .++..++. .+++. ++.+ .++.+ ..+.+..+ .-
T Consensus 69 l~pga~ell~~lk~~~-~~~IVS~~~~~---~~~~il~~-----lgi~~--~~an~l~~~~~g~~---tG~~~~~~--~~ 132 (203)
T TIGR02137 69 PLEGAVEFVDWLRERF-QVVILSDTFYE---FSQPLMRQ-----LGFPT--LLCHKLEIDDSDRV---VGYQLRQK--DP 132 (203)
T ss_pred CCccHHHHHHHHHhCC-eEEEEeCChHH---HHHHHHHH-----cCCch--hhceeeEEecCCee---ECeeecCc--ch
Confidence 5789999999999985 99999996554 44555555 44542 2211 10111 11122211 24
Q ss_pred HHHHHHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCCCCCEEEEcCCCcccccccc-cccccHhhHHhhhhh
Q psy12533 462 KISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLSRIFTINSRGEVKHEMTQ-TFQSTYSNMSYLVDQ 534 (567)
Q Consensus 462 K~~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~~rIF~In~~g~~~~~~~~-~~~~sY~~l~~~vd~ 534 (567)
|..+++.++.. ... ..+||+..||+.+.+.+|++. .++++-.+.....+ ...++|..|-+..+.
T Consensus 133 K~~~l~~l~~~----~~~-~v~vGDs~nDl~ml~~Ag~~i----a~~ak~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (203)
T TIGR02137 133 KRQSVIAFKSL----YYR-VIAAGDSYNDTTMLSEAHAGI----LFHAPENVIREFPQFPAVHTYEDLKREFLK 197 (203)
T ss_pred HHHHHHHHHhh----CCC-EEEEeCCHHHHHHHHhCCCCE----EecCCHHHHHhCCCCCcccCHHHHHHHHHH
Confidence 77777777652 223 568999999999999999884 45665444332221 245778777766553
No 162
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=95.50 E-value=0.041 Score=56.39 Aligned_cols=91 Identities=14% Similarity=0.192 Sum_probs=52.0
Q ss_pred chhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCC--CceecCCCchhhhhhhhhhccCh--hHHHH
Q psy12533 113 QNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPE--GPMLLNPTSLLNAFHTEVIEKKP--QEFKI 188 (567)
Q Consensus 113 h~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~--GPlllsp~~l~~al~REvi~k~p--~~fKi 188 (567)
.+|+.++.+.++++|+++.-+|+.+... .+..|.. .++.. ..++.+. . +-.++| +.|+.
T Consensus 103 ~~g~~e~L~~Lk~~g~~l~ivTn~~~~~---~~~~l~~-----~~i~~~f~~i~~~d-~--------~~~~Kp~p~~~~~ 165 (272)
T PRK13223 103 YPGVRDTLKWLKKQGVEMALITNKPERF---VAPLLDQ-----MKIGRYFRWIIGGD-T--------LPQKKPDPAALLF 165 (272)
T ss_pred CCCHHHHHHHHHHCCCeEEEEECCcHHH---HHHHHHH-----cCcHhhCeEEEecC-C--------CCCCCCCcHHHHH
Confidence 4688889999999999999999876532 2333333 12211 1122221 1 112344 33333
Q ss_pred HHHHHHHHhCCCCCCCEEEecCCcccchhhhhhcCCCC
Q psy12533 189 SCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPL 226 (567)
Q Consensus 189 ~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~ 226 (567)
.+ ..+.-...- ...+|++.+|+.+=+++|+..
T Consensus 166 ~~-----~~~g~~~~~-~l~IGD~~~Di~aA~~aGi~~ 197 (272)
T PRK13223 166 VM-----KMAGVPPSQ-SLFVGDSRSDVLAAKAAGVQC 197 (272)
T ss_pred HH-----HHhCCChhH-EEEECCCHHHHHHHHHCCCeE
Confidence 32 222111112 457999999999999999974
No 163
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=95.49 E-value=0.011 Score=59.94 Aligned_cols=55 Identities=22% Similarity=0.472 Sum_probs=37.9
Q ss_pred CeEEEEecCCccccCCcccccccccCcCCcchhHHHHHHHHH---HCCceEEEEccCcccchHHHHHHHHhcccCCccCC
Q psy12533 358 DKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIK---ENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLP 434 (567)
Q Consensus 358 ~kiVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~---~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP 434 (567)
.++++||+|||++.. ...+...|..-++ ..+-.++|+|+|...+. ++-+.. .++|
T Consensus 2 ~~ll~sDlD~Tl~~~--------------~~~~~~~l~~~l~~~~~~~~~~v~~TGRs~~~~---~~~~~~-----~~l~ 59 (247)
T PF05116_consen 2 PRLLASDLDGTLIDG--------------DDEALARLEELLEQQARPEILFVYVTGRSLESV---LRLLRE-----YNLP 59 (247)
T ss_dssp SEEEEEETBTTTBHC--------------HHHHHHHHHHHHHHHHCCGEEEEEE-SS-HHHH---HHHHHH-----CT-E
T ss_pred CEEEEEECCCCCcCC--------------CHHHHHHHHHHHHHhhCCCceEEEECCCCHHHH---HHHHHh-----CCCC
Confidence 468999999999922 1345666666666 78999999999999887 454555 5565
No 164
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=95.46 E-value=0.025 Score=58.38 Aligned_cols=91 Identities=19% Similarity=0.176 Sum_probs=51.7
Q ss_pred chhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCC-ceecCCCchhhhhhhhhhccChhHHHHHHH
Q psy12533 388 QNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEG-PMLLNPTSLLNAFHTEVIEKKPQEFKISCL 466 (567)
Q Consensus 388 h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~G-Pvl~spd~l~~al~rEvi~k~p~~fK~~~L 466 (567)
.|||.++...++++|+++.-+|+...... ...|+. ++|.+= -.+.+. +...++|+.+
T Consensus 144 ~pg~~e~L~~L~~~gi~laIvSn~~~~~~---~~~L~~-----~gl~~~F~~vi~~---------~~~~~k~~~~----- 201 (273)
T PRK13225 144 FPGVADLLAQLRSRSLCLGILSSNSRQNI---EAFLQR-----QGLRSLFSVVQAG---------TPILSKRRAL----- 201 (273)
T ss_pred CCCHHHHHHHHHHCCCeEEEEeCCCHHHH---HHHHHH-----cCChhheEEEEec---------CCCCCCHHHH-----
Confidence 46888888889999999998888754333 444544 333110 001111 1112234333
Q ss_pred HHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCCC
Q psy12533 467 RDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPL 501 (567)
Q Consensus 467 ~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~ 501 (567)
..+...+.-...- ..-+|++..|+.+=+++|+..
T Consensus 202 ~~~l~~~~~~p~~-~l~IGDs~~Di~aA~~AG~~~ 235 (273)
T PRK13225 202 SQLVAREGWQPAA-VMYVGDETRDVEAARQVGLIA 235 (273)
T ss_pred HHHHHHhCcChhH-EEEECCCHHHHHHHHHCCCeE
Confidence 2322222211112 357899999999999999964
No 165
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=95.37 E-value=0.21 Score=49.94 Aligned_cols=108 Identities=15% Similarity=0.216 Sum_probs=64.8
Q ss_pred CCeEEEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCC
Q psy12533 357 NDKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEG 436 (567)
Q Consensus 357 ~~kiVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~G 436 (567)
.-++|+||+|||+-... ..-||+.++.++++++|+++..+|..+...+.. ...|.. .+++.+
T Consensus 7 ~~~~~~~D~dG~l~~~~------------~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~-~~~L~~-----~gl~~~ 68 (242)
T TIGR01459 7 DYDVFLLDLWGVIIDGN------------HTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSL-HKTLKS-----LGINAD 68 (242)
T ss_pred cCCEEEEecccccccCC------------ccCccHHHHHHHHHHCCCEEEEEeCCCCChHHH-HHHHHH-----CCCCcc
Confidence 45689999999998652 135799999999999999999999976543322 244555 566531
Q ss_pred --ceecCCCchhhhhhhhhhccChhHHHHHHHHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCC
Q psy12533 437 --PMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGI 499 (567)
Q Consensus 437 --Pvl~spd~l~~al~rEvi~k~p~~fK~~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGI 499 (567)
..+++++.. -.+.|..+..-++... .-...+|++..|+.....+|.
T Consensus 69 ~~~~Ii~s~~~----------------~~~~l~~~~~~~~~~~-~~~~~vGd~~~d~~~~~~~~~ 116 (242)
T TIGR01459 69 LPEMIISSGEI----------------AVQMILESKKRFDIRN-GIIYLLGHLENDIINLMQCYT 116 (242)
T ss_pred ccceEEccHHH----------------HHHHHHhhhhhccCCC-ceEEEeCCcccchhhhcCCCc
Confidence 222223211 1123333322121111 113467887778887766665
No 166
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=95.36 E-value=0.035 Score=50.84 Aligned_cols=88 Identities=17% Similarity=0.256 Sum_probs=53.1
Q ss_pred hhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhccChhHHHHHHHHH
Q psy12533 389 NGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRD 468 (567)
Q Consensus 389 ~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GPvl~spd~l~~al~rEvi~k~p~~fK~~~L~~ 468 (567)
+|+.+++..++++|+++.-+|+++...+....+.+ +.+ ... .++++.+ . . -.++|+.|...|
T Consensus 67 ~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~--l~~----~f~-~i~~~~~-~------~-~Kp~~~~~~~~~--- 128 (154)
T TIGR01549 67 RGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH--LGD----YFD-LILGSDE-F------G-AKPEPEIFLAAL--- 128 (154)
T ss_pred cCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH--HHh----cCc-EEEecCC-C------C-CCcCHHHHHHHH---
Confidence 79999999999999999999998876665444432 111 111 2333332 1 0 123445554444
Q ss_pred HHhhCCCCCCCEEEecCCCcccHHhHHHcC
Q psy12533 469 IMALFPPNTQPFYAGYGNKVNDVWSYQAVG 498 (567)
Q Consensus 469 i~~lf~~~~~pf~agfGNr~tDv~aY~~vG 498 (567)
.-+..... ..-+|++..|+.+=+++|
T Consensus 129 --~~~~~~~~--~l~iGDs~~Di~aa~~aG 154 (154)
T TIGR01549 129 --ESLGLPPE--VLHVGDNLNDIEGARNAG 154 (154)
T ss_pred --HHcCCCCC--EEEEeCCHHHHHHHHHcc
Confidence 22221122 346899999999988876
No 167
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=95.35 E-value=0.015 Score=57.60 Aligned_cols=63 Identities=19% Similarity=0.384 Sum_probs=43.6
Q ss_pred EEEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCc--
Q psy12533 360 IVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGP-- 437 (567)
Q Consensus 360 iVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GP-- 437 (567)
+|++|+|||+..++ ++.+. ..++.+ .+++|.+++.+|||+.... +.++.. .+++ +|
T Consensus 1 li~~DlDgTLl~~~----------~~~~~--~~~~~~-~~~~gi~~viaTGR~~~~v---~~~~~~-----l~l~-~~~~ 58 (236)
T TIGR02471 1 LIITDLDNTLLGDD----------EGLAS--FVELLR-GSGDAVGFGIATGRSVESA---KSRYAK-----LNLP-SPDV 58 (236)
T ss_pred CeEEeccccccCCH----------HHHHH--HHHHHH-hcCCCceEEEEeCCCHHHH---HHHHHh-----CCCC-CCCE
Confidence 48899999999764 22211 225666 5899999999999998877 777766 4443 34
Q ss_pred eecCCCc
Q psy12533 438 MLLNPTS 444 (567)
Q Consensus 438 vl~spd~ 444 (567)
+++....
T Consensus 59 ~I~~nGa 65 (236)
T TIGR02471 59 LIARVGT 65 (236)
T ss_pred EEECCCc
Confidence 6655544
No 168
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=95.25 E-value=0.13 Score=50.67 Aligned_cols=130 Identities=21% Similarity=0.317 Sum_probs=84.0
Q ss_pred CCeEEEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHCCceEEEEcc-----Ccc----cchHHHHHHHHhcc
Q psy12533 357 NDKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSA-----RAI----GQSRVTREYLQSVK 427 (567)
Q Consensus 357 ~~kiVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSa-----Rpi----~qa~~Tr~~L~~~~ 427 (567)
..|++..|=||||-.--- + +...+-+=+-.+|+.+...++++.||+++-+|- |.. .....+..-++.++
T Consensus 4 ~~k~lflDRDGtin~d~~-~-yv~~~~~~~~~~g~i~al~~l~~~gy~lVvvTNQsGi~rgyf~~~~f~~~~~~m~~~l~ 81 (181)
T COG0241 4 DQKALFLDRDGTINIDKG-D-YVDSLDDFQFIPGVIPALLKLQRAGYKLVVVTNQSGIGRGYFTEADFDKLHNKMLKILA 81 (181)
T ss_pred CCcEEEEcCCCceecCCC-c-ccCcHHHhccCccHHHHHHHHHhCCCeEEEEECCCCccccCccHHHHHHHHHHHHHHHH
Confidence 368999999999987521 1 222222223799999999999999999999997 321 12222333445677
Q ss_pred cCCccCCCCceecCCCchhhhhhhh--hhccChhHHHHHHHHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCC
Q psy12533 428 QEDLTLPEGPMLLNPTSLLNAFHTE--VIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIP 500 (567)
Q Consensus 428 Q~~~~lP~GPvl~spd~l~~al~rE--vi~k~p~~fK~~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp 500 (567)
++|..|. +-++ .|. +.| ---++| |..++.+...=+.-+-.- -.-.|+|.+|+.+=.++||.
T Consensus 82 ~~gv~id-~i~~-Cph------~p~~~c~cRKP---~~gm~~~~~~~~~iD~~~-s~~VGD~~~Dlq~a~n~gi~ 144 (181)
T COG0241 82 SQGVKID-GILY-CPH------HPEDNCDCRKP---KPGMLLSALKEYNIDLSR-SYVVGDRLTDLQAAENAGIK 144 (181)
T ss_pred HcCCccc-eEEE-CCC------CCCCCCcccCC---ChHHHHHHHHHhCCCccc-eEEecCcHHHHHHHHHCCCC
Confidence 7777664 3333 342 222 134677 777766665544322222 23679999999999999999
No 169
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=95.20 E-value=0.1 Score=50.80 Aligned_cols=132 Identities=15% Similarity=0.171 Sum_probs=70.6
Q ss_pred CeEEEEecCCccccCCc----ccccc----------cccCcC-CcchhHHHHHHHHHHCCceEEEEccC-cccchHHHHH
Q psy12533 358 DKIVISDIDGTITKSDV----LGHVL----------PIMGKD-WAQNGVTRLFTKIKENGYKLLYLSAR-AIGQSRVTRE 421 (567)
Q Consensus 358 ~kiVIsDIDGTiTkSD~----~G~~~----------~~~GkD-w~h~Gva~l~~~i~~nGY~iiYLSaR-pi~qa~~Tr~ 421 (567)
.|+||||.|+|+..--. .+.+- -..+.. -..+||.++...++++||++.-+|+. +... .+.
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~---~~~ 78 (174)
T TIGR01685 2 PRVIVFDLDGTLWDHYMISLLGGPFKPVKQNNSIIIDKSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEW---AYE 78 (174)
T ss_pred CcEEEEeCCCCCcCcccccccCCCceeccCCCCeEEeCCCCEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHH---HHH
Confidence 58999999999875322 11111 112222 25789999999999999999999987 5443 344
Q ss_pred HHHhcc--cCCccCCCCceecCCCchhhhhhhhhhccChhHHHHHHHHHHHhhCC--CCCCCEEEecCCCcccHHhHHHc
Q psy12533 422 YLQSVK--QEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFP--PNTQPFYAGYGNKVNDVWSYQAV 497 (567)
Q Consensus 422 ~L~~~~--Q~~~~lP~GPvl~spd~l~~al~rEvi~k~p~~fK~~~L~~i~~lf~--~~~~pf~agfGNr~tDv~aY~~v 497 (567)
.|..+. ..|...|.=.. -+....+ .++..++| . ..+++.+...++ -...- ..-+|++..|+.+=+++
T Consensus 79 ~L~~~~l~~~~~~~~~~~~---Fd~iv~~--~~~~~~kp--~-~~i~~~~~~~~~~gl~p~e-~l~VgDs~~di~aA~~a 149 (174)
T TIGR01685 79 ILGTFEITYAGKTVPMHSL---FDDRIEI--YKPNKAKQ--L-EMILQKVNKVDPSVLKPAQ-ILFFDDRTDNVREVWGY 149 (174)
T ss_pred HHHhCCcCCCCCcccHHHh---ceeeeec--cCCchHHH--H-HHHHHHhhhcccCCCCHHH-eEEEcChhHhHHHHHHh
Confidence 454411 11111110000 0111110 11111111 1 122444443321 01112 34689999999999999
Q ss_pred CCCC
Q psy12533 498 GIPL 501 (567)
Q Consensus 498 GIp~ 501 (567)
|+..
T Consensus 150 Gi~~ 153 (174)
T TIGR01685 150 GVTS 153 (174)
T ss_pred CCEE
Confidence 9965
No 170
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=95.20 E-value=0.036 Score=64.02 Aligned_cols=67 Identities=22% Similarity=0.430 Sum_probs=47.3
Q ss_pred CcEEEEecCCccccCCccccccccccccccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCc
Q psy12533 83 DKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGP 162 (567)
Q Consensus 83 ~kiVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GP 162 (567)
.|+|++|+|||++.++. ..+ +-..+..++++++|++|+-+|||+.... ..+++. .+++ .|
T Consensus 416 ~KLIfsDLDGTLLd~d~---------~i~--~~t~eAL~~L~ekGI~~VIATGRs~~~i---~~l~~~-----Lgl~-~~ 475 (694)
T PRK14502 416 KKIVYTDLDGTLLNPLT---------YSY--STALDALRLLKDKELPLVFCSAKTMGEQ---DLYRNE-----LGIK-DP 475 (694)
T ss_pred eeEEEEECcCCCcCCCC---------ccC--HHHHHHHHHHHHcCCeEEEEeCCCHHHH---HHHHHH-----cCCC-Ce
Confidence 46899999999998753 112 2356788899999999999999997754 455544 3333 35
Q ss_pred eecCCCc
Q psy12533 163 MLLNPTS 169 (567)
Q Consensus 163 lllsp~~ 169 (567)
+++...+
T Consensus 476 ~I~eNGA 482 (694)
T PRK14502 476 FITENGG 482 (694)
T ss_pred EEEcCCC
Confidence 6655543
No 171
>PLN02940 riboflavin kinase
Probab=95.18 E-value=0.075 Score=57.40 Aligned_cols=130 Identities=11% Similarity=0.108 Sum_probs=69.2
Q ss_pred chhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCC--CCceecCCCchhhhhhhhhhccChhHHHHHH
Q psy12533 388 QNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLP--EGPMLLNPTSLLNAFHTEVIEKKPQEFKISC 465 (567)
Q Consensus 388 h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP--~GPvl~spd~l~~al~rEvi~k~p~~fK~~~ 465 (567)
.+|+.++.+.++++|+++.-+|+.+.... +..|.. . .++- --.+++ .+... .-.++|+.|..++
T Consensus 95 ~pGv~elL~~Lk~~g~~l~IvTn~~~~~~---~~~l~~--~--~gl~~~Fd~ii~-~d~v~------~~KP~p~~~~~a~ 160 (382)
T PLN02940 95 LPGANRLIKHLKSHGVPMALASNSPRANI---EAKISC--H--QGWKESFSVIVG-GDEVE------KGKPSPDIFLEAA 160 (382)
T ss_pred CcCHHHHHHHHHHCCCcEEEEeCCcHHHH---HHHHHh--c--cChHhhCCEEEe-hhhcC------CCCCCHHHHHHHH
Confidence 47888999999999999999999864433 333331 0 1111 012222 22110 0133456665554
Q ss_pred HHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCCCCCEEEEcCCCcccc-cccccccccHhhHHhhhhhcCCCCC
Q psy12533 466 LRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLSRIFTINSRGEVKH-EMTQTFQSTYSNMSYLVDQMFPSSL 540 (567)
Q Consensus 466 L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~~rIF~In~~g~~~~-~~~~~~~~sY~~l~~~vd~~FP~~~ 540 (567)
+.+. + ++ .. ...+|++.+|+.|=+++|++. |.+-...+.... ........++..|. .++.+|||-.
T Consensus 161 -~~lg-v-~p-~~--~l~VGDs~~Di~aA~~aGi~~--I~v~~g~~~~~~~~~ad~~i~sl~el~-~~~~~~~~~~ 227 (382)
T PLN02940 161 -KRLN-V-EP-SN--CLVIEDSLPGVMAGKAAGMEV--IAVPSIPKQTHLYSSADEVINSLLDLQ-PEKWGLPPFN 227 (382)
T ss_pred -HHcC-C-Ch-hH--EEEEeCCHHHHHHHHHcCCEE--EEECCCCcchhhccCccEEeCCHhHcC-HHHcCCCCcc
Confidence 2221 1 11 22 346899999999999999973 433221111111 11112346666665 3336688755
No 172
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=95.15 E-value=0.039 Score=56.91 Aligned_cols=90 Identities=20% Similarity=0.199 Sum_probs=51.0
Q ss_pred hhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCC-ceecCCCchhhhhhhhhhccChhHHHHHHHH
Q psy12533 114 NGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEG-PMLLNPTSLLNAFHTEVIEKKPQEFKISCLR 192 (567)
Q Consensus 114 ~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~G-Plllsp~~l~~al~REvi~k~p~~fKi~~L~ 192 (567)
+||.++...++++|+++.-+|+... +.+...|+. .+|..= -.+.+. +....+|+ .+.
T Consensus 145 pg~~e~L~~L~~~gi~laIvSn~~~---~~~~~~L~~-----~gl~~~F~~vi~~---------~~~~~k~~-----~~~ 202 (273)
T PRK13225 145 PGVADLLAQLRSRSLCLGILSSNSR---QNIEAFLQR-----QGLRSLFSVVQAG---------TPILSKRR-----ALS 202 (273)
T ss_pred CCHHHHHHHHHHCCCeEEEEeCCCH---HHHHHHHHH-----cCChhheEEEEec---------CCCCCCHH-----HHH
Confidence 5888888888889999998888654 333445544 332110 001111 11112333 333
Q ss_pred HHHHhCCCCCCCEEEecCCcccchhhhhhcCCCC
Q psy12533 193 DIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPL 226 (567)
Q Consensus 193 ~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~ 226 (567)
.+...+.-...- ..-+|++..|+.+=+++|+..
T Consensus 203 ~~l~~~~~~p~~-~l~IGDs~~Di~aA~~AG~~~ 235 (273)
T PRK13225 203 QLVAREGWQPAA-VMYVGDETRDVEAARQVGLIA 235 (273)
T ss_pred HHHHHhCcChhH-EEEECCCHHHHHHHHHCCCeE
Confidence 333332211111 457899999999999999964
No 173
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=95.13 E-value=0.054 Score=57.02 Aligned_cols=66 Identities=17% Similarity=0.194 Sum_probs=48.4
Q ss_pred EEecCCCcEEEEecCCccccCCccccccccccccccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCc
Q psy12533 77 FKWRWNDKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDL 156 (567)
Q Consensus 77 ylw~~~~kiVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~ 156 (567)
++|.. .++|+||+||||..+.-..+ =..+||.++...++++|+++.-+|+++-..+ ...|+. .
T Consensus 121 ~~~~~-~kvIvFDLDgTLi~~~~~v~--------irdPgV~EaL~~LkekGikLaIaTS~~Re~v---~~~L~~-----l 183 (301)
T TIGR01684 121 KVFEP-PHVVVFDLDSTLITDEEPVR--------IRDPRIYDSLTELKKRGCILVLWSYGDRDHV---VESMRK-----V 183 (301)
T ss_pred ccccc-ceEEEEecCCCCcCCCCccc--------cCCHHHHHHHHHHHHCCCEEEEEECCCHHHH---HHHHHH-----c
Confidence 44443 45999999999998742111 1258999999999999999999998755544 456766 6
Q ss_pred cCC
Q psy12533 157 TLP 159 (567)
Q Consensus 157 ~LP 159 (567)
+|.
T Consensus 184 GLd 186 (301)
T TIGR01684 184 KLD 186 (301)
T ss_pred CCC
Confidence 665
No 174
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=95.07 E-value=0.021 Score=56.59 Aligned_cols=63 Identities=19% Similarity=0.384 Sum_probs=43.5
Q ss_pred EEEEecCCccccCCccccccccccccccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCc--
Q psy12533 85 IVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGP-- 162 (567)
Q Consensus 85 iVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GP-- 162 (567)
+|++|+|||++.++ ++.+. ..++.+ .+++|.+|+.+|||+.... +.++.. ..++ +|
T Consensus 1 li~~DlDgTLl~~~----------~~~~~--~~~~~~-~~~~gi~~viaTGR~~~~v---~~~~~~-----l~l~-~~~~ 58 (236)
T TIGR02471 1 LIITDLDNTLLGDD----------EGLAS--FVELLR-GSGDAVGFGIATGRSVESA---KSRYAK-----LNLP-SPDV 58 (236)
T ss_pred CeEEeccccccCCH----------HHHHH--HHHHHH-hcCCCceEEEEeCCCHHHH---HHHHHh-----CCCC-CCCE
Confidence 48899999999764 11211 225555 4888999999999998766 777766 4554 44
Q ss_pred eecCCCc
Q psy12533 163 MLLNPTS 169 (567)
Q Consensus 163 lllsp~~ 169 (567)
+++....
T Consensus 59 ~I~~nGa 65 (236)
T TIGR02471 59 LIARVGT 65 (236)
T ss_pred EEECCCc
Confidence 6655543
No 175
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=95.02 E-value=0.043 Score=56.23 Aligned_cols=53 Identities=17% Similarity=0.219 Sum_probs=39.8
Q ss_pred CeEEEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHH-CCceEEEEccCcccch
Q psy12533 358 DKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKE-NGYKLLYLSARAIGQS 416 (567)
Q Consensus 358 ~kiVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~-nGY~iiYLSaRpi~qa 416 (567)
..+|++|+||||+... +.-..-...+...+..+++++ +|..++.+|||+....
T Consensus 14 ~~li~~D~DGTLl~~~------~~p~~~~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~ 67 (266)
T PRK10187 14 NYAWFFDLDGTLAEIK------PHPDQVVVPDNILQGLQLLATANDGALALISGRSMVEL 67 (266)
T ss_pred CEEEEEecCCCCCCCC------CCcccccCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHH
Confidence 4689999999999641 000011345788899999998 8999999999988765
No 176
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=94.95 E-value=0.072 Score=56.11 Aligned_cols=76 Identities=14% Similarity=0.111 Sum_probs=52.7
Q ss_pred CCcEEEEecCCccccCCccccccccccccccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCC
Q psy12533 82 NDKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEG 161 (567)
Q Consensus 82 ~~kiVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~G 161 (567)
-.|+|+||+||||..++--.++ ..+||.++...++++|+++.-+|+.+-..+ +..|.. .+|+.=
T Consensus 127 ~~~~i~~D~D~TL~~~~~~v~i--------rdp~V~EtL~eLkekGikLaIvTNg~Re~v---~~~Le~-----lgL~~y 190 (303)
T PHA03398 127 IPHVIVFDLDSTLITDEEPVRI--------RDPFVYDSLDELKERGCVLVLWSYGNREHV---VHSLKE-----TKLEGY 190 (303)
T ss_pred eccEEEEecCCCccCCCCcccc--------CChhHHHHHHHHHHCCCEEEEEcCCChHHH---HHHHHH-----cCCCcc
Confidence 3479999999999988421111 248999999999999999999997544433 667777 666521
Q ss_pred --ceecCCCchhhh
Q psy12533 162 --PMLLNPTSLLNA 173 (567)
Q Consensus 162 --Plllsp~~l~~a 173 (567)
.++++.+....+
T Consensus 191 FDvII~~g~i~~k~ 204 (303)
T PHA03398 191 FDIIICGGRKAGEY 204 (303)
T ss_pred ccEEEECCCccccc
Confidence 355555444433
No 177
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=94.94 E-value=0.46 Score=47.57 Aligned_cols=60 Identities=18% Similarity=0.289 Sum_probs=45.0
Q ss_pred CCcEEEEecCCccccCCccccccccccccccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCC
Q psy12533 82 NDKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLP 159 (567)
Q Consensus 82 ~~kiVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP 159 (567)
+-++|++|+|||+-... ..-+|+.++.++++++|+++..+|..+-..+.. ...|+. .+++
T Consensus 7 ~~~~~~~D~dG~l~~~~------------~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~-~~~L~~-----~gl~ 66 (242)
T TIGR01459 7 DYDVFLLDLWGVIIDGN------------HTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSL-HKTLKS-----LGIN 66 (242)
T ss_pred cCCEEEEecccccccCC------------ccCccHHHHHHHHHHCCCEEEEEeCCCCChHHH-HHHHHH-----CCCC
Confidence 45689999999998653 135799999999999999999999976543322 245555 5565
No 178
>PRK09449 dUMP phosphatase; Provisional
Probab=94.91 E-value=0.12 Score=50.26 Aligned_cols=91 Identities=13% Similarity=0.182 Sum_probs=50.9
Q ss_pred chhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCC--CceecCCCchhhhhhhhhh--ccChhHHHH
Q psy12533 388 QNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPE--GPMLLNPTSLLNAFHTEVI--EKKPQEFKI 463 (567)
Q Consensus 388 h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~--GPvl~spd~l~~al~rEvi--~k~p~~fK~ 463 (567)
.||+.++...++ +||++.-+|..+. ..++..|+. .++.. -.++++- ++. .++|+.|..
T Consensus 97 ~~g~~~~L~~L~-~~~~~~i~Tn~~~---~~~~~~l~~-----~~l~~~fd~v~~~~---------~~~~~KP~p~~~~~ 158 (224)
T PRK09449 97 LPGAVELLNALR-GKVKMGIITNGFT---ELQQVRLER-----TGLRDYFDLLVISE---------QVGVAKPDVAIFDY 158 (224)
T ss_pred CccHHHHHHHHH-hCCeEEEEeCCcH---HHHHHHHHh-----CChHHHcCEEEEEC---------ccCCCCCCHHHHHH
Confidence 468888888888 6899988988543 333444544 33211 1122221 222 334455543
Q ss_pred HHHHHHHhhCCCCCCCEEEecCCCc-ccHHhHHHcCCCC
Q psy12533 464 SCLRDIMALFPPNTQPFYAGYGNKV-NDVWSYQAVGIPL 501 (567)
Q Consensus 464 ~~L~~i~~lf~~~~~pf~agfGNr~-tDv~aY~~vGIp~ 501 (567)
. ++.+. +.++ .. ..-.|++. +|+.+=+++|+..
T Consensus 159 ~-~~~~~-~~~~-~~--~~~vgD~~~~Di~~A~~aG~~~ 192 (224)
T PRK09449 159 A-LEQMG-NPDR-SR--VLMVGDNLHSDILGGINAGIDT 192 (224)
T ss_pred H-HHHcC-CCCc-cc--EEEEcCCcHHHHHHHHHCCCcE
Confidence 3 23221 1111 12 34578887 6999999999974
No 179
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=94.88 E-value=0.019 Score=58.18 Aligned_cols=55 Identities=22% Similarity=0.472 Sum_probs=37.9
Q ss_pred CcEEEEecCCccccCCccccccccccccccchhHHHHHHHHH---HCCceEEEEccCcccchHHHHHHHHhcccCCccCC
Q psy12533 83 DKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIK---ENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLP 159 (567)
Q Consensus 83 ~kiVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~---~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP 159 (567)
.++++||+|||++.. ...+.+.|..-++ +.+-.|+|+|+|...++ ++-+.. .++|
T Consensus 2 ~~ll~sDlD~Tl~~~--------------~~~~~~~l~~~l~~~~~~~~~~v~~TGRs~~~~---~~~~~~-----~~l~ 59 (247)
T PF05116_consen 2 PRLLASDLDGTLIDG--------------DDEALARLEELLEQQARPEILFVYVTGRSLESV---LRLLRE-----YNLP 59 (247)
T ss_dssp SEEEEEETBTTTBHC--------------HHHHHHHHHHHHHHHHCCGEEEEEE-SS-HHHH---HHHHHH-----CT-E
T ss_pred CEEEEEECCCCCcCC--------------CHHHHHHHHHHHHHhhCCCceEEEECCCCHHHH---HHHHHh-----CCCC
Confidence 358999999999921 1335667766666 66899999999999887 455555 5565
No 180
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=94.87 E-value=0.19 Score=49.40 Aligned_cols=130 Identities=22% Similarity=0.333 Sum_probs=85.1
Q ss_pred CCcEEEEecCCccccCCccccccccccccccchhHHHHHHHHHHCCceEEEEcc-----Cc-ccchH---HHHHHHHhcc
Q psy12533 82 NDKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSA-----RA-IGQSR---VTREYLQSVK 152 (567)
Q Consensus 82 ~~kiVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSa-----Rp-i~~a~---~Tr~~L~~~~ 152 (567)
..|++..|-||||-+--- + +...+-+=+-.+|+.+...++++.||+++-+|- |. ..+++ .+..-+..+.
T Consensus 4 ~~k~lflDRDGtin~d~~-~-yv~~~~~~~~~~g~i~al~~l~~~gy~lVvvTNQsGi~rgyf~~~~f~~~~~~m~~~l~ 81 (181)
T COG0241 4 DQKALFLDRDGTINIDKG-D-YVDSLDDFQFIPGVIPALLKLQRAGYKLVVVTNQSGIGRGYFTEADFDKLHNKMLKILA 81 (181)
T ss_pred CCcEEEEcCCCceecCCC-c-ccCcHHHhccCccHHHHHHHHHhCCCeEEEEECCCCccccCccHHHHHHHHHHHHHHHH
Confidence 368999999999986421 1 322333335788999999999999999999996 31 12222 2222345666
Q ss_pred cCCccCCCCceecCCCchhhhhhhh--hhccChhHHHHHHHHHHHHhCCCCCCCEEEecCCcccchhhhhhcCCC
Q psy12533 153 QEDLTLPEGPMLLNPTSLLNAFHTE--VIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIP 225 (567)
Q Consensus 153 q~~~~LP~GPlllsp~~l~~al~RE--vi~k~p~~fKi~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp 225 (567)
++|..|. + ++..|. +.| ---++| |..++.+..+-+.-+-. .-.-.|+|.+|+.+=.++||.
T Consensus 82 ~~gv~id-~-i~~Cph------~p~~~c~cRKP---~~gm~~~~~~~~~iD~~-~s~~VGD~~~Dlq~a~n~gi~ 144 (181)
T COG0241 82 SQGVKID-G-ILYCPH------HPEDNCDCRKP---KPGMLLSALKEYNIDLS-RSYVVGDRLTDLQAAENAGIK 144 (181)
T ss_pred HcCCccc-e-EEECCC------CCCCCCcccCC---ChHHHHHHHHHhCCCcc-ceEEecCcHHHHHHHHHCCCC
Confidence 6776664 2 333332 222 245667 88887777766553322 244678899999999999999
No 181
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=94.63 E-value=0.059 Score=55.26 Aligned_cols=53 Identities=15% Similarity=0.161 Sum_probs=39.4
Q ss_pred CcEEEEecCCccccCCccccccccccccccchhHHHHHHHHHH-CCceEEEEccCcccch
Q psy12533 83 DKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKE-NGYKLLYLSARAIGQS 141 (567)
Q Consensus 83 ~kiVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~-nGY~ilYLSaRpi~~a 141 (567)
..+|++|+||||+.... .-..-...+...+..+++++ +|.+++.+|||+....
T Consensus 14 ~~li~~D~DGTLl~~~~------~p~~~~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~ 67 (266)
T PRK10187 14 NYAWFFDLDGTLAEIKP------HPDQVVVPDNILQGLQLLATANDGALALISGRSMVEL 67 (266)
T ss_pred CEEEEEecCCCCCCCCC------CcccccCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHH
Confidence 45899999999996310 00011345688888999988 7999999999998765
No 182
>PLN02940 riboflavin kinase
Probab=94.53 E-value=0.081 Score=57.14 Aligned_cols=92 Identities=16% Similarity=0.237 Sum_probs=52.6
Q ss_pred chhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCC--CCceecCCCchhhhhhhhhhccCh--hHHHH
Q psy12533 113 QNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLP--EGPMLLNPTSLLNAFHTEVIEKKP--QEFKI 188 (567)
Q Consensus 113 h~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP--~GPlllsp~~l~~al~REvi~k~p--~~fKi 188 (567)
.+|+.++.+.++++|+++.-+|+.+-.. ++..|.. . .++- --.++.+. ++...+| +.|..
T Consensus 95 ~pGv~elL~~Lk~~g~~l~IvTn~~~~~---~~~~l~~--~--~gl~~~Fd~ii~~d---------~v~~~KP~p~~~~~ 158 (382)
T PLN02940 95 LPGANRLIKHLKSHGVPMALASNSPRAN---IEAKISC--H--QGWKESFSVIVGGD---------EVEKGKPSPDIFLE 158 (382)
T ss_pred CcCHHHHHHHHHHCCCcEEEEeCCcHHH---HHHHHHh--c--cChHhhCCEEEehh---------hcCCCCCCHHHHHH
Confidence 4688889999999999999999976433 2333331 0 1111 01122221 2223344 44544
Q ss_pred HHHHHHHHhCCCCCCCEEEecCCcccchhhhhhcCCCC
Q psy12533 189 SCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPL 226 (567)
Q Consensus 189 ~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~ 226 (567)
++ +.+ .+ ++ .. ...+|++..|+.+=+++|++.
T Consensus 159 a~-~~l-gv-~p-~~--~l~VGDs~~Di~aA~~aGi~~ 190 (382)
T PLN02940 159 AA-KRL-NV-EP-SN--CLVIEDSLPGVMAGKAAGMEV 190 (382)
T ss_pred HH-HHc-CC-Ch-hH--EEEEeCCHHHHHHHHHcCCEE
Confidence 44 222 11 11 12 456799999999999999973
No 183
>PRK09449 dUMP phosphatase; Provisional
Probab=94.50 E-value=0.28 Score=47.82 Aligned_cols=91 Identities=14% Similarity=0.218 Sum_probs=49.4
Q ss_pred chhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCC--CceecCCCchhhhhhhhhhccCh--hHHHH
Q psy12533 113 QNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPE--GPMLLNPTSLLNAFHTEVIEKKP--QEFKI 188 (567)
Q Consensus 113 h~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~--GPlllsp~~l~~al~REvi~k~p--~~fKi 188 (567)
.+|+.++...++ +||++.-+|..+ .+.++..|+. .+|.. -.++.+. ++...|| +.|..
T Consensus 97 ~~g~~~~L~~L~-~~~~~~i~Tn~~---~~~~~~~l~~-----~~l~~~fd~v~~~~---------~~~~~KP~p~~~~~ 158 (224)
T PRK09449 97 LPGAVELLNALR-GKVKMGIITNGF---TELQQVRLER-----TGLRDYFDLLVISE---------QVGVAKPDVAIFDY 158 (224)
T ss_pred CccHHHHHHHHH-hCCeEEEEeCCc---HHHHHHHHHh-----CChHHHcCEEEEEC---------ccCCCCCCHHHHHH
Confidence 357888888888 579988888854 3344445544 33211 1122221 2223345 33432
Q ss_pred HHHHHHHHhCCCCCCCEEEecCCcc-cchhhhhhcCCCC
Q psy12533 189 SCLRDIMALFPPNTQPFYAGYGNKV-NDVWSYQAVGIPL 226 (567)
Q Consensus 189 ~~L~~i~~lf~~~~~pf~agfGNr~-tDv~aY~~vGIp~ 226 (567)
.+ +.+ ...++ .. ..-.|++. +|+.+=+++|+..
T Consensus 159 ~~-~~~-~~~~~-~~--~~~vgD~~~~Di~~A~~aG~~~ 192 (224)
T PRK09449 159 AL-EQM-GNPDR-SR--VLMVGDNLHSDILGGINAGIDT 192 (224)
T ss_pred HH-HHc-CCCCc-cc--EEEEcCCcHHHHHHHHHCCCcE
Confidence 22 222 11111 11 44567887 6999999999975
No 184
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=94.31 E-value=0.09 Score=55.28 Aligned_cols=52 Identities=17% Similarity=0.273 Sum_probs=41.0
Q ss_pred EEEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHC----CceEEEEccCcccchHHHHHHH
Q psy12533 360 IVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKEN----GYKLLYLSARAIGQSRVTREYL 423 (567)
Q Consensus 360 iVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~n----GY~iiYLSaRpi~qa~~Tr~~L 423 (567)
.||||+||||..+. . ..+|+.+.++.++.+ |+++++||...-.-.....++|
T Consensus 2 ~~ifD~DGvL~~g~-----------~-~i~ga~eal~~L~~~~~~~g~~~~flTNn~g~s~~~~~~~l 57 (321)
T TIGR01456 2 GFAFDIDGVLFRGK-----------K-PIAGASDALRRLNRNQGQLKIPYIFLTNGGGFSERARAEEI 57 (321)
T ss_pred EEEEeCcCceECCc-----------c-ccHHHHHHHHHHhccccccCCCEEEEecCCCCCHHHHHHHH
Confidence 58999999998773 2 389999999999999 9999999986554444434444
No 185
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=94.23 E-value=0.091 Score=48.95 Aligned_cols=123 Identities=13% Similarity=0.060 Sum_probs=70.5
Q ss_pred CeEEEEecCCccccCCc---ccccccc---------cC-c--CCcchhHHHHHHHHHHCCceEEEEccCcccchHHHHHH
Q psy12533 358 DKIVISDIDGTITKSDV---LGHVLPI---------MG-K--DWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREY 422 (567)
Q Consensus 358 ~kiVIsDIDGTiTkSD~---~G~~~~~---------~G-k--Dw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~ 422 (567)
.+++|.|+||||-.+-. .+-..+. .. . -...||+.++...++ +||++.-.|+-+...++. .
T Consensus 2 k~~lvldld~tl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~---i 77 (148)
T smart00577 2 KKTLVLDLDETLVHSTHRSFKEWTNRDFIVPVLIDGHPHGVYVKKRPGVDEFLKRAS-ELFELVVFTAGLRMYADP---V 77 (148)
T ss_pred CcEEEEeCCCCeECCCCCcCCCCCccceEEEEEeCCceEEEEEEECCCHHHHHHHHH-hccEEEEEeCCcHHHHHH---H
Confidence 46799999999988632 1111110 00 0 135899999999998 679999999877665543 3
Q ss_pred HHhcccCCccCCCCceecCCCchhhhhhhh-hhccChhHHHHHHHHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCCC
Q psy12533 423 LQSVKQEDLTLPEGPMLLNPTSLLNAFHTE-VIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPL 501 (567)
Q Consensus 423 L~~~~Q~~~~lP~GPvl~spd~l~~al~rE-vi~k~p~~fK~~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~ 501 (567)
|+. .++. ... .+.. +.+| +...+|+ +++.+..+ .....- ...+|++..|+.+-.+.||+.
T Consensus 78 l~~-----l~~~-~~~---f~~i---~~~~d~~~~KP~-----~~k~l~~l-~~~p~~-~i~i~Ds~~~~~aa~~ngI~i 138 (148)
T smart00577 78 LDL-----LDPK-KYF---GYRR---LFRDECVFVKGK-----YVKDLSLL-GRDLSN-VIIIDDSPDSWPFHPENLIPI 138 (148)
T ss_pred HHH-----hCcC-CCE---eeeE---EECccccccCCe-----EeecHHHc-CCChhc-EEEEECCHHHhhcCccCEEEe
Confidence 433 1111 100 0111 1222 2234665 33334332 111111 347899999999988888876
Q ss_pred CC
Q psy12533 502 SR 503 (567)
Q Consensus 502 ~r 503 (567)
..
T Consensus 139 ~~ 140 (148)
T smart00577 139 KP 140 (148)
T ss_pred cC
Confidence 54
No 186
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=94.16 E-value=0.099 Score=48.72 Aligned_cols=123 Identities=14% Similarity=0.086 Sum_probs=69.6
Q ss_pred CcEEEEecCCccccCCc---ccccccccc----------c--cccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHH
Q psy12533 83 DKIVISDIDGTITKSDV---LGHVLPIMG----------K--DWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREY 147 (567)
Q Consensus 83 ~kiVISDIDGTITkSD~---lG~il~~lG----------k--Dwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~ 147 (567)
.+.+|.|+||||-.+-. .+-..+..+ + -...||+.++...++ +||++.-+|+.+-..++. .
T Consensus 2 k~~lvldld~tl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~---i 77 (148)
T smart00577 2 KKTLVLDLDETLVHSTHRSFKEWTNRDFIVPVLIDGHPHGVYVKKRPGVDEFLKRAS-ELFELVVFTAGLRMYADP---V 77 (148)
T ss_pred CcEEEEeCCCCeECCCCCcCCCCCccceEEEEEeCCceEEEEEEECCCHHHHHHHHH-hccEEEEEeCCcHHHHHH---H
Confidence 35899999999988732 111111000 1 145789999999998 579999999976655543 3
Q ss_pred HHhcccCCccCCCCceecCCCchhhhhhhhhhccChhHHHHHHHHHHHHhCCCCCCCEEEecCCcccchhhhhhcCCCCC
Q psy12533 148 LQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLS 227 (567)
Q Consensus 148 L~~~~q~~~~LP~GPlllsp~~l~~al~REvi~k~p~~fKi~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~~ 227 (567)
|+.+.-.. .+ ..-++.+. ++...+|+ +++.+..+ .....- ...+|++..|+.+-.+.||+..
T Consensus 78 l~~l~~~~-~~-f~~i~~~~---------d~~~~KP~-----~~k~l~~l-~~~p~~-~i~i~Ds~~~~~aa~~ngI~i~ 139 (148)
T smart00577 78 LDLLDPKK-YF-GYRRLFRD---------ECVFVKGK-----YVKDLSLL-GRDLSN-VIIIDDSPDSWPFHPENLIPIK 139 (148)
T ss_pred HHHhCcCC-CE-eeeEEECc---------cccccCCe-----EeecHHHc-CCChhc-EEEEECCHHHhhcCccCEEEec
Confidence 44310000 00 01122211 22334564 33333332 111111 4578999999999888888765
No 187
>PLN02423 phosphomannomutase
Probab=94.05 E-value=0.12 Score=52.39 Aligned_cols=54 Identities=15% Similarity=0.225 Sum_probs=38.0
Q ss_pred CCeE-EEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHh
Q psy12533 357 NDKI-VISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQS 425 (567)
Q Consensus 357 ~~ki-VIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~ 425 (567)
..|+ +.|||||||..++. -..+...+.+++++++ .+|+-.|||+. ...+..+..
T Consensus 5 ~~~~i~~~D~DGTLl~~~~-----------~i~~~~~~ai~~l~~~-i~fviaTGR~~---~~~~~~~~~ 59 (245)
T PLN02423 5 KPGVIALFDVDGTLTAPRK-----------EATPEMLEFMKELRKV-VTVGVVGGSDL---SKISEQLGK 59 (245)
T ss_pred ccceEEEEeccCCCcCCCC-----------cCCHHHHHHHHHHHhC-CEEEEECCcCH---HHHHHHhcc
Confidence 3454 45999999998751 1235668899999987 99999999943 333444443
No 188
>COG2503 Predicted secreted acid phosphatase [General function prediction only]
Probab=93.95 E-value=0.099 Score=53.66 Aligned_cols=76 Identities=28% Similarity=0.423 Sum_probs=58.3
Q ss_pred cCCCcEEEEecCCccccCCc-c-cccc---cccccccc----------chhHHHHHHHHHHCCceEEEEccCcccc-hHH
Q psy12533 80 RWNDKIVISDIDGTITKSDV-L-GHVL---PIMGKDWA----------QNGVTRLFTKIKENGYKLLYLSARAIGQ-SRV 143 (567)
Q Consensus 80 ~~~~kiVISDIDGTITkSD~-l-G~il---~~lGkDwt----------h~GVa~Ly~~i~~nGY~ilYLSaRpi~~-a~~ 143 (567)
.-..++||.|||-||...-. - .+++ +.-.++|+ -||+.++.+...+||-+|+|+|-|.-.. .+.
T Consensus 76 k~K~~aVvlDlDETvLdNs~Yqgy~v~nnk~f~pe~Wd~wV~a~~sk~vpGA~eFl~Yvn~~Gg~ifyiSNR~~~~~~~~ 155 (274)
T COG2503 76 KGKKKAVVLDLDETVLDNSAYQGYQVLNNKGFTPETWDKWVQAKKSKAVPGAVEFLNYVNSNGGKIFYISNRDQENEKDG 155 (274)
T ss_pred cCCCceEEEecchHhhcCccccchhhhcCCCCCccchHHHHhhcccccCccHHHHHHHHHhcCcEEEEEeccchhcccch
Confidence 33455899999999998655 2 2332 33345654 3599999999999999999999998866 889
Q ss_pred HHHHHHhcccCCccCCC
Q psy12533 144 TREYLQSVKQEDLTLPE 160 (567)
Q Consensus 144 Tr~~L~~~~q~~~~LP~ 160 (567)
|.+=|.+ .+||.
T Consensus 156 T~~nLk~-----~g~~~ 167 (274)
T COG2503 156 TIENLKS-----EGLPQ 167 (274)
T ss_pred hHHHHHH-----cCccc
Confidence 9988887 67773
No 189
>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins. 5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....
Probab=93.91 E-value=0.061 Score=52.00 Aligned_cols=39 Identities=21% Similarity=0.457 Sum_probs=34.3
Q ss_pred cchhHHHHHHHHHHCCceEEEEccCccc----chHHHHHHHHh
Q psy12533 387 AQNGVTRLFTKIKENGYKLLYLSARAIG----QSRVTREYLQS 425 (567)
Q Consensus 387 ~h~Gva~l~~~i~~nGY~iiYLSaRpi~----qa~~Tr~~L~~ 425 (567)
+.+|+.++++++.+.|+.++|+|+||.. .+..|++||+.
T Consensus 74 p~~gA~e~l~~L~~~g~~~~~Itar~~~~~~~~~~~k~~Wl~~ 116 (191)
T PF06941_consen 74 PIPGAVEALKKLRDKGHEIVIITARPPEFPDHSAEEKREWLER 116 (191)
T ss_dssp B-TTHHHHHHHHHTSTTEEEEEEE-SSSSGCCCHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHcCCcEEEEEecCccccchHHHHHHHHHHH
Confidence 5679999999999999999999999887 67899999998
No 190
>PLN02423 phosphomannomutase
Probab=93.63 E-value=0.14 Score=51.80 Aligned_cols=43 Identities=16% Similarity=0.298 Sum_probs=33.0
Q ss_pred Cc-EEEEecCCccccCCccccccccccccccchhHHHHHHHHHHCCceEEEEccCc
Q psy12533 83 DK-IVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARA 137 (567)
Q Consensus 83 ~k-iVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRp 137 (567)
.| ++.||||||+..++- . ..+...+..++++++ .+|+-+|||+
T Consensus 6 ~~~i~~~D~DGTLl~~~~----------~-i~~~~~~ai~~l~~~-i~fviaTGR~ 49 (245)
T PLN02423 6 PGVIALFDVDGTLTAPRK----------E-ATPEMLEFMKELRKV-VTVGVVGGSD 49 (245)
T ss_pred cceEEEEeccCCCcCCCC----------c-CCHHHHHHHHHHHhC-CEEEEECCcC
Confidence 35 455999999998752 1 234567889999987 9999999993
No 191
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=93.57 E-value=0.19 Score=52.28 Aligned_cols=69 Identities=16% Similarity=0.311 Sum_probs=50.5
Q ss_pred eEEEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCce
Q psy12533 359 KIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPM 438 (567)
Q Consensus 359 kiVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GPv 438 (567)
++++||+||||-... ..-||+++..+.++++|-+++|||-.+.--.+...+-|.. +.+...+..-+
T Consensus 9 ~~~l~DlDGvl~~G~------------~~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~L~~--~~~~~~~~~~i 74 (269)
T COG0647 9 DGFLFDLDGVLYRGN------------EAIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAARLSS--LGGVDVTPDDI 74 (269)
T ss_pred CEEEEcCcCceEeCC------------ccCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHHHh--hcCCCCCHHHe
Confidence 569999999998542 3578999999999999999999999988777655555544 02333444444
Q ss_pred ecC
Q psy12533 439 LLN 441 (567)
Q Consensus 439 l~s 441 (567)
++|
T Consensus 75 ~TS 77 (269)
T COG0647 75 VTS 77 (269)
T ss_pred ecH
Confidence 443
No 192
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=93.36 E-value=0.17 Score=53.27 Aligned_cols=52 Identities=17% Similarity=0.259 Sum_probs=41.0
Q ss_pred EEEEecCCccccCCccccccccccccccchhHHHHHHHHHHC----CceEEEEccCcccchHHHHHHH
Q psy12533 85 IVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKEN----GYKLLYLSARAIGQSRVTREYL 148 (567)
Q Consensus 85 iVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~n----GY~ilYLSaRpi~~a~~Tr~~L 148 (567)
+||||+||||..++. ..+|+.+.++.+..+ |+++++||...-.-.....++|
T Consensus 2 ~~ifD~DGvL~~g~~------------~i~ga~eal~~L~~~~~~~g~~~~flTNn~g~s~~~~~~~l 57 (321)
T TIGR01456 2 GFAFDIDGVLFRGKK------------PIAGASDALRRLNRNQGQLKIPYIFLTNGGGFSERARAEEI 57 (321)
T ss_pred EEEEeCcCceECCcc------------ccHHHHHHHHHHhccccccCCCEEEEecCCCCCHHHHHHHH
Confidence 589999999998732 278999999999999 9999999986544444444555
No 193
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=93.34 E-value=0.4 Score=46.65 Aligned_cols=130 Identities=15% Similarity=0.190 Sum_probs=69.7
Q ss_pred CcEEEEecCCccccCCc----ccccc----------cccccc-ccchhHHHHHHHHHHCCceEEEEccC-cccchHHHHH
Q psy12533 83 DKIVISDIDGTITKSDV----LGHVL----------PIMGKD-WAQNGVTRLFTKIKENGYKLLYLSAR-AIGQSRVTRE 146 (567)
Q Consensus 83 ~kiVISDIDGTITkSD~----lG~il----------~~lGkD-wth~GVa~Ly~~i~~nGY~ilYLSaR-pi~~a~~Tr~ 146 (567)
.|+||||.|+|+..--. .+.+- -..+.. -..+||.++.+.++++|+++.-+|+. +... .+.
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~---~~~ 78 (174)
T TIGR01685 2 PRVIVFDLDGTLWDHYMISLLGGPFKPVKQNNSIIIDKSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEW---AYE 78 (174)
T ss_pred CcEEEEeCCCCCcCcccccccCCCceeccCCCCeEEeCCCCEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHH---HHH
Confidence 57899999999875322 11111 111222 34569999999999999999999986 5543 344
Q ss_pred HHHhcc--cCCccCCCCceecCCCchhhhhhhhhhccChhHHHHHHHHHHHHhC----CCCCCCEEEecCCcccchhhhh
Q psy12533 147 YLQSVK--QEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALF----PPNTQPFYAGYGNKVNDVWSYQ 220 (567)
Q Consensus 147 ~L~~~~--q~~~~LP~GPlllsp~~l~~al~REvi~k~p~~fKi~~L~~i~~lf----~~~~~pf~agfGNr~tDv~aY~ 220 (567)
.|..+. ..|...|.=..+ +....+ .+...++| + ..+++.+...+ .+ .- ..-+|++..|+.+=+
T Consensus 79 ~L~~~~l~~~~~~~~~~~~F---d~iv~~--~~~~~~kp--~-~~i~~~~~~~~~~gl~p--~e-~l~VgDs~~di~aA~ 147 (174)
T TIGR01685 79 ILGTFEITYAGKTVPMHSLF---DDRIEI--YKPNKAKQ--L-EMILQKVNKVDPSVLKP--AQ-ILFFDDRTDNVREVW 147 (174)
T ss_pred HHHhCCcCCCCCcccHHHhc---eeeeec--cCCchHHH--H-HHHHHHhhhcccCCCCH--HH-eEEEcChhHhHHHHH
Confidence 444411 111111100000 011100 11111111 1 12244444332 11 11 456899999999999
Q ss_pred hcCCCC
Q psy12533 221 AVGIPL 226 (567)
Q Consensus 221 ~vGIp~ 226 (567)
++|+..
T Consensus 148 ~aGi~~ 153 (174)
T TIGR01685 148 GYGVTS 153 (174)
T ss_pred HhCCEE
Confidence 999865
No 194
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=93.24 E-value=0.23 Score=49.58 Aligned_cols=27 Identities=22% Similarity=0.303 Sum_probs=20.3
Q ss_pred EEecCCC-cccHHhHHHcCCCCCCEEEEcCC
Q psy12533 481 YAGYGNK-VNDVWSYQAVGIPLSRIFTINSR 510 (567)
Q Consensus 481 ~agfGNr-~tDv~aY~~vGIp~~rIF~In~~ 510 (567)
..-+|++ .+|+.+=+++|+.. |+ |+..
T Consensus 183 ~~~VGD~~~~Di~~A~~aG~~~--i~-v~~~ 210 (238)
T PRK10748 183 ILHVGDDLTTDVAGAIRCGMQA--CW-INPE 210 (238)
T ss_pred EEEEcCCcHHHHHHHHHCCCeE--EE-EcCC
Confidence 3468888 59999999999975 44 4554
No 195
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=93.23 E-value=0.24 Score=47.74 Aligned_cols=91 Identities=11% Similarity=0.184 Sum_probs=49.0
Q ss_pred chhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCC--CceecCCCchhhhhhhhhhc--cChhHHHH
Q psy12533 113 QNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPE--GPMLLNPTSLLNAFHTEVIE--KKPQEFKI 188 (567)
Q Consensus 113 h~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~--GPlllsp~~l~~al~REvi~--k~p~~fKi 188 (567)
.+|+.++.+.++++ |++.-+|+.+.... +.-|+. .+|-. .-++.+. ++.. ++|+.|..
T Consensus 99 ~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~---~~~l~~-----~~l~~~fd~i~~~~---------~~~~~KP~~~~~~~ 160 (224)
T TIGR02254 99 LPGAFELMENLQQK-FRLYIVTNGVRETQ---YKRLRK-----SGLFPFFDDIFVSE---------DAGIQKPDKEIFNY 160 (224)
T ss_pred CccHHHHHHHHHhc-CcEEEEeCCchHHH---HHHHHH-----CCcHhhcCEEEEcC---------ccCCCCCCHHHHHH
Confidence 34777788888888 88888888654333 223333 22210 1122221 2222 33444553
Q ss_pred HHHHHHHHhCCCCCCCEEEecCCcc-cchhhhhhcCCCC
Q psy12533 189 SCLRDIMALFPPNTQPFYAGYGNKV-NDVWSYQAVGIPL 226 (567)
Q Consensus 189 ~~L~~i~~lf~~~~~pf~agfGNr~-tDv~aY~~vGIp~ 226 (567)
.+ +.+..+ .+ .. ..-+|++. +|+.+-+++|++.
T Consensus 161 ~~-~~~~~~-~~-~~--~v~igD~~~~di~~A~~~G~~~ 194 (224)
T TIGR02254 161 AL-ERMPKF-SK-EE--VLMIGDSLTADIKGGQNAGLDT 194 (224)
T ss_pred HH-HHhcCC-Cc-hh--eEEECCCcHHHHHHHHHCCCcE
Confidence 32 222111 11 11 34578877 7999999999986
No 196
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=92.94 E-value=0.27 Score=51.12 Aligned_cols=55 Identities=20% Similarity=0.364 Sum_probs=46.4
Q ss_pred cEEEEecCCccccCCccccccccccccccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHh
Q psy12533 84 KIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQS 150 (567)
Q Consensus 84 kiVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~ 150 (567)
+++++|+||||-+.. ..-||+++..+.++++|-+++|||-.+.--.++..+-|..
T Consensus 9 ~~~l~DlDGvl~~G~------------~~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~L~~ 63 (269)
T COG0647 9 DGFLFDLDGVLYRGN------------EAIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAARLSS 63 (269)
T ss_pred CEEEEcCcCceEeCC------------ccCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHHHh
Confidence 469999999998653 3567999999999999999999999998888766666655
No 197
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=92.93 E-value=0.43 Score=45.62 Aligned_cols=110 Identities=16% Similarity=0.201 Sum_probs=66.2
Q ss_pred chhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCC--Cc-eecCCCchhhhhhhhhhccCh-hHHHH
Q psy12533 388 QNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPE--GP-MLLNPTSLLNAFHTEVIEKKP-QEFKI 463 (567)
Q Consensus 388 h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~--GP-vl~spd~l~~al~rEvi~k~p-~~fK~ 463 (567)
.+|+.++.+.++++|+++.-+|+.+.... +.+++. .+++. |. +....++.+ ..++..... ..-|.
T Consensus 89 ~~~~~~~l~~l~~~g~~v~ivS~s~~~~v---~~~~~~-----lg~~~~~~~~l~~~~~g~~---~g~~~~~~~~g~~K~ 157 (202)
T TIGR01490 89 YPEARDLIRWHKAEGHTIVLVSASLTILV---KPLARI-----LGIDNAIGTRLEESEDGIY---TGNIDGNNCKGEGKV 157 (202)
T ss_pred cHHHHHHHHHHHHCCCEEEEEeCCcHHHH---HHHHHH-----cCCcceEecceEEcCCCEE---eCCccCCCCCChHHH
Confidence 56888888889999999999999887655 455544 33332 11 111122222 111111111 23477
Q ss_pred HHHHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCCCCCEEEEcCCCcc
Q psy12533 464 SCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLSRIFTINSRGEV 513 (567)
Q Consensus 464 ~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~~rIF~In~~g~~ 513 (567)
..++.+..-..-.. .-..+||+..+|+.+-+.+|.+ +.|||+.++
T Consensus 158 ~~l~~~~~~~~~~~-~~~~~~gDs~~D~~~~~~a~~~----~~v~~~~~l 202 (202)
T TIGR01490 158 HALAELLAEEQIDL-KDSYAYGDSISDLPLLSLVGHP----YVVNPDKKL 202 (202)
T ss_pred HHHHHHHHHcCCCH-HHcEeeeCCcccHHHHHhCCCc----EEeCCCCCC
Confidence 76766654222111 1246899999999999999976 478887543
No 198
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=92.88 E-value=0.29 Score=59.58 Aligned_cols=92 Identities=17% Similarity=0.195 Sum_probs=57.0
Q ss_pred chhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCC---CCceecCCCchhhhhhhhhhccChhHHHHH
Q psy12533 388 QNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLP---EGPMLLNPTSLLNAFHTEVIEKKPQEFKIS 464 (567)
Q Consensus 388 h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP---~GPvl~spd~l~~al~rEvi~k~p~~fK~~ 464 (567)
-||+.++.+.++++||++.-+|+.+.... +..|+. .+++ --.++.+.+ . ....++|+.|..
T Consensus 163 ~pG~~elL~~Lk~~G~~l~IvSn~~~~~~---~~~L~~-----~gl~~~~Fd~iv~~~~-~------~~~KP~Pe~~~~- 226 (1057)
T PLN02919 163 FPGALELITQCKNKGLKVAVASSADRIKV---DANLAA-----AGLPLSMFDAIVSADA-F------ENLKPAPDIFLA- 226 (1057)
T ss_pred CccHHHHHHHHHhCCCeEEEEeCCcHHHH---HHHHHH-----cCCChhHCCEEEECcc-c------ccCCCCHHHHHH-
Confidence 45888888899999999999999755444 344554 3333 012222221 1 012455688864
Q ss_pred HHHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCC
Q psy12533 465 CLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIP 500 (567)
Q Consensus 465 ~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp 500 (567)
+++.+.. =| .. ...+|++..|+.|=+++|+.
T Consensus 227 a~~~lgv-~p--~e--~v~IgDs~~Di~AA~~aGm~ 257 (1057)
T PLN02919 227 AAKILGV-PT--SE--CVVIEDALAGVQAARAAGMR 257 (1057)
T ss_pred HHHHcCc-Cc--cc--EEEEcCCHHHHHHHHHcCCE
Confidence 3444321 11 22 34699999999999999984
No 199
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=92.80 E-value=0.21 Score=50.11 Aligned_cols=40 Identities=18% Similarity=0.427 Sum_probs=33.8
Q ss_pred EEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHCCceEEEEccCc
Q psy12533 361 VISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARA 412 (567)
Q Consensus 361 VIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRp 412 (567)
|+||+||||..++. .-+|+.+.++.++++|++++++|..+
T Consensus 1 ~lfD~DGvL~~~~~------------~~~~a~e~i~~l~~~g~~~~~~tN~~ 40 (236)
T TIGR01460 1 FLFDIDGVLWLGHK------------PIPGAAEALNRLRAKGKPVVFLTNNS 40 (236)
T ss_pred CEEeCcCccCcCCc------------cCcCHHHHHHHHHHCCCeEEEEECCC
Confidence 68999999998742 35689999999999999999999443
No 200
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=92.74 E-value=0.28 Score=59.69 Aligned_cols=92 Identities=17% Similarity=0.198 Sum_probs=55.5
Q ss_pred chhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCC---CCceecCCCchhhhhhhhhhccChhHHHHH
Q psy12533 113 QNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLP---EGPMLLNPTSLLNAFHTEVIEKKPQEFKIS 189 (567)
Q Consensus 113 h~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP---~GPlllsp~~l~~al~REvi~k~p~~fKi~ 189 (567)
-+|+.++.+.++++||++.-+|+.+.... +..|+. .+++ .-.++.+.+ . ....++|+.|..
T Consensus 163 ~pG~~elL~~Lk~~G~~l~IvSn~~~~~~---~~~L~~-----~gl~~~~Fd~iv~~~~-~------~~~KP~Pe~~~~- 226 (1057)
T PLN02919 163 FPGALELITQCKNKGLKVAVASSADRIKV---DANLAA-----AGLPLSMFDAIVSADA-F------ENLKPAPDIFLA- 226 (1057)
T ss_pred CccHHHHHHHHHhCCCeEEEEeCCcHHHH---HHHHHH-----cCCChhHCCEEEECcc-c------ccCCCCHHHHHH-
Confidence 35888888899999999999999655444 344554 3333 012222221 1 012445666754
Q ss_pred HHHHHHHhCCCCCCCEEEecCCcccchhhhhhcCCC
Q psy12533 190 CLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIP 225 (567)
Q Consensus 190 ~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp 225 (567)
+++.+. +-|. . ...+|++..|+.+=+++|+.
T Consensus 227 a~~~lg-v~p~--e--~v~IgDs~~Di~AA~~aGm~ 257 (1057)
T PLN02919 227 AAKILG-VPTS--E--CVVIEDALAGVQAARAAGMR 257 (1057)
T ss_pred HHHHcC-cCcc--c--EEEEcCCHHHHHHHHHcCCE
Confidence 334332 1121 2 45689999999999999984
No 201
>COG2503 Predicted secreted acid phosphatase [General function prediction only]
Probab=92.74 E-value=0.22 Score=51.26 Aligned_cols=76 Identities=29% Similarity=0.469 Sum_probs=57.8
Q ss_pred eCCCeEEEEecCCccccCCc-cc-ccc---cccCcCCc----------chhHHHHHHHHHHCCceEEEEccCcccc-hHH
Q psy12533 355 RWNDKIVISDIDGTITKSDV-LG-HVL---PIMGKDWA----------QNGVTRLFTKIKENGYKLLYLSARAIGQ-SRV 418 (567)
Q Consensus 355 ~~~~kiVIsDIDGTiTkSD~-~G-~~~---~~~GkDw~----------h~Gva~l~~~i~~nGY~iiYLSaRpi~q-a~~ 418 (567)
.-..++||.|||-||...-. -| +++ +.-.++|. -||+.++.+...+||-+|+|+|-|.... .+.
T Consensus 76 k~K~~aVvlDlDETvLdNs~Yqgy~v~nnk~f~pe~Wd~wV~a~~sk~vpGA~eFl~Yvn~~Gg~ifyiSNR~~~~~~~~ 155 (274)
T COG2503 76 KGKKKAVVLDLDETVLDNSAYQGYQVLNNKGFTPETWDKWVQAKKSKAVPGAVEFLNYVNSNGGKIFYISNRDQENEKDG 155 (274)
T ss_pred cCCCceEEEecchHhhcCccccchhhhcCCCCCccchHHHHhhcccccCccHHHHHHHHHhcCcEEEEEeccchhcccch
Confidence 34556899999999987544 22 222 33355663 4799999999999999999999998877 888
Q ss_pred HHHHHHhcccCCccCCC
Q psy12533 419 TREYLQSVKQEDLTLPE 435 (567)
Q Consensus 419 Tr~~L~~~~Q~~~~lP~ 435 (567)
|.+=|.+ .+||.
T Consensus 156 T~~nLk~-----~g~~~ 167 (274)
T COG2503 156 TIENLKS-----EGLPQ 167 (274)
T ss_pred hHHHHHH-----cCccc
Confidence 8887776 66763
No 202
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=92.67 E-value=0.24 Score=49.46 Aligned_cols=21 Identities=19% Similarity=0.213 Sum_probs=17.2
Q ss_pred EEecCCc-ccchhhhhhcCCCC
Q psy12533 206 YAGYGNK-VNDVWSYQAVGIPL 226 (567)
Q Consensus 206 ~agfGNr-~tDv~aY~~vGIp~ 226 (567)
..-+|++ .+|+.+=+++|+..
T Consensus 183 ~~~VGD~~~~Di~~A~~aG~~~ 204 (238)
T PRK10748 183 ILHVGDDLTTDVAGAIRCGMQA 204 (238)
T ss_pred EEEEcCCcHHHHHHHHHCCCeE
Confidence 4567888 59999999999975
No 203
>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins. 5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....
Probab=92.46 E-value=0.15 Score=49.37 Aligned_cols=39 Identities=21% Similarity=0.457 Sum_probs=33.9
Q ss_pred cchhHHHHHHHHHHCCceEEEEccCccc----chHHHHHHHHh
Q psy12533 112 AQNGVTRLFTKIKENGYKLLYLSARAIG----QSRVTREYLQS 150 (567)
Q Consensus 112 th~GVa~Ly~~i~~nGY~ilYLSaRpi~----~a~~Tr~~L~~ 150 (567)
+.+|+.+.++++.+.|+.++|+||||.. .+..|++||+.
T Consensus 74 p~~gA~e~l~~L~~~g~~~~~Itar~~~~~~~~~~~k~~Wl~~ 116 (191)
T PF06941_consen 74 PIPGAVEALKKLRDKGHEIVIITARPPEFPDHSAEEKREWLER 116 (191)
T ss_dssp B-TTHHHHHHHHHTSTTEEEEEEE-SSSSGCCCHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHcCCcEEEEEecCccccchHHHHHHHHHHH
Confidence 3459999999999999999999999887 67899999998
No 204
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=92.40 E-value=0.25 Score=49.49 Aligned_cols=53 Identities=19% Similarity=0.326 Sum_probs=38.7
Q ss_pred EEEecCCccccCCccccccccccccccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHh
Q psy12533 86 VISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQS 150 (567)
Q Consensus 86 VISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~ 150 (567)
|+||+||||..++. .-+|+.+..+.++++|++++++|..+-.-.....+.|..
T Consensus 1 ~lfD~DGvL~~~~~------------~~~~a~e~i~~l~~~g~~~~~~tN~~~~~~~~~~~~l~~ 53 (236)
T TIGR01460 1 FLFDIDGVLWLGHK------------PIPGAAEALNRLRAKGKPVVFLTNNSSRSEEDYAEKLSS 53 (236)
T ss_pred CEEeCcCccCcCCc------------cCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHH
Confidence 68999999998742 245899999999999999999995443333333444433
No 205
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=92.31 E-value=0.49 Score=45.92 Aligned_cols=126 Identities=13% Similarity=0.161 Sum_probs=69.6
Q ss_pred chhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCC--CceecCCCchhhhhhhhhhccChhHHHHHH
Q psy12533 388 QNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPE--GPMLLNPTSLLNAFHTEVIEKKPQEFKISC 465 (567)
Q Consensus 388 h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~--GPvl~spd~l~~al~rEvi~k~p~~fK~~~ 465 (567)
.||+.++.+.++++|+++.-+|+.+. ..++..|+. .++.. ..++. .+.. ++ -.++|+.|...+
T Consensus 84 ~~g~~~~l~~L~~~g~~~~i~S~~~~---~~~~~~l~~-----~gl~~~f~~i~~-~~~~----~~--~Kp~p~~~~~~~ 148 (214)
T PRK13288 84 YETVYETLKTLKKQGYKLGIVTTKMR---DTVEMGLKL-----TGLDEFFDVVIT-LDDV----EH--AKPDPEPVLKAL 148 (214)
T ss_pred CcCHHHHHHHHHHCCCeEEEEeCCCH---HHHHHHHHH-----cCChhceeEEEe-cCcC----CC--CCCCcHHHHHHH
Confidence 57999999999999999999999874 334555555 33321 11222 1111 00 133456665433
Q ss_pred HHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCCCCCEEEEcC--CCcccccccccccccHhhHHhhhhhc
Q psy12533 466 LRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLSRIFTINS--RGEVKHEMTQTFQSTYSNMSYLVDQM 535 (567)
Q Consensus 466 L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~~rIF~In~--~g~~~~~~~~~~~~sY~~l~~~vd~~ 535 (567)
+.+ .....- ..-+|++.+|+.|=+++|++.--+- -+. ..++..........++..+.++++.|
T Consensus 149 -~~~----~~~~~~-~~~iGDs~~Di~aa~~aG~~~i~v~-~g~~~~~~l~~~~~~~~i~~~~~l~~~i~~~ 213 (214)
T PRK13288 149 -ELL----GAKPEE-ALMVGDNHHDILAGKNAGTKTAGVA-WTIKGREYLEQYKPDFMLDKMSDLLAIVGDM 213 (214)
T ss_pred -HHc----CCCHHH-EEEECCCHHHHHHHHHCCCeEEEEc-CCCCCHHHHhhcCcCEEECCHHHHHHHHhhc
Confidence 222 111111 3469999999999999999642110 111 12232222223356666666666554
No 206
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=92.23 E-value=0.84 Score=47.93 Aligned_cols=122 Identities=16% Similarity=0.162 Sum_probs=70.4
Q ss_pred CCeEEEEecCCccccCCccccc-ccccCcCCcchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCC
Q psy12533 357 NDKIVISDIDGTITKSDVLGHV-LPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPE 435 (567)
Q Consensus 357 ~~kiVIsDIDGTiTkSD~~G~~-~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~ 435 (567)
.-|+||+|.|+||..- ++|-- ...+.-.-.++|+.++...+++.|+++--+|.-+.. .++..|+. | |
T Consensus 2 ~~k~~v~DlDnTlw~g-v~~e~g~~~i~~~~~~~~~~e~L~~L~~~Gi~lai~S~n~~~---~a~~~l~~-----~--~- 69 (320)
T TIGR01686 2 ALKVLVLDLDNTLWGG-VLGEDGIDNLNLSPLHKTLQEKIKTLKKQGFLLALASKNDED---DAKKVFER-----R--K- 69 (320)
T ss_pred CeEEEEEcCCCCCCCC-EEccCCccccccCccHHHHHHHHHHHHhCCCEEEEEcCCCHH---HHHHHHHh-----C--c-
Confidence 4689999999999853 22211 000001124899999999999999999999998664 34555644 1 1
Q ss_pred CceecCCCchhhhhhhhhhccChhHHHHHHHHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCC
Q psy12533 436 GPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGI 499 (567)
Q Consensus 436 GPvl~spd~l~~al~rEvi~k~p~~fK~~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGI 499 (567)
+-+.+ + ..|.+. .+..+| |-+.+..+..-+.-...- ..-+|++..|+.+-++.+.
T Consensus 70 ~~~~~-~-~~f~~~---~~~~~p---k~~~i~~~~~~l~i~~~~-~vfidD~~~d~~~~~~~lp 124 (320)
T TIGR01686 70 DFILQ-A-EDFDAR---SINWGP---KSESLRKIAKKLNLGTDS-FLFIDDNPAERANVKITLP 124 (320)
T ss_pred cccCc-H-HHeeEE---EEecCc---hHHHHHHHHHHhCCCcCc-EEEECCCHHHHHHHHHHCC
Confidence 10111 1 122222 112234 444444444333222223 3468999999999888654
No 207
>PLN02382 probable sucrose-phosphatase
Probab=91.73 E-value=0.23 Score=54.43 Aligned_cols=55 Identities=15% Similarity=0.243 Sum_probs=38.2
Q ss_pred EEEEecCCccccCCccccccccccccccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHh
Q psy12533 85 IVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQS 150 (567)
Q Consensus 85 iVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~ 150 (567)
+|+||+|||+..++ +. +.-+-.-...++.++.++|-.|++.|||+..++ +.+++.
T Consensus 11 lI~sDLDGTLL~~~--~~------~~~s~~~~~~l~~~~~~~gi~fv~aTGR~~~~~---~~l~~~ 65 (413)
T PLN02382 11 MIVSDLDHTMVDHH--DP------ENLSLLRFNALWEAEYRHDSLLVFSTGRSPTLY---KELRKE 65 (413)
T ss_pred EEEEcCCCcCcCCC--Cc------cchhHHHHHHHHHHhhcCCeeEEEEcCCCHHHH---HHHHHh
Confidence 79999999999662 00 011222345566778899999999999998776 444444
No 208
>COG5663 Uncharacterized conserved protein [Function unknown]
Probab=91.39 E-value=0.4 Score=46.96 Aligned_cols=71 Identities=24% Similarity=0.329 Sum_probs=48.8
Q ss_pred CceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhccChhHHHHHHHHHHH-HhCCCCCCCE
Q psy12533 127 GYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIM-ALFPPNTQPF 205 (567)
Q Consensus 127 GY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GPlllsp~~l~~al~REvi~k~p~~fKi~~L~~i~-~lf~~~~~pf 205 (567)
-.+++|+|||.--....|..||.. .++| -+.| |.+... .|++|.+... ++ +|
T Consensus 87 ~~~L~~itar~~dl~~iT~~~l~~-----q~ih-------~~~l------~i~g~h---~KV~~vrth~idl------f~ 139 (194)
T COG5663 87 EHRLIYITARKADLTRITYAWLFI-----QNIH-------YDHL------EIVGLH---HKVEAVRTHNIDL------FF 139 (194)
T ss_pred hceeeeeehhhHHHHHHHHHHHHH-----hccc-------hhhh------hhhccc---ccchhhHhhccCc------cc
Confidence 389999999999999999999998 7787 4444 333332 3788877654 33 33
Q ss_pred EEecCCcccchhhhhhcCCCCC
Q psy12533 206 YAGYGNKVNDVWSYQAVGIPLS 227 (567)
Q Consensus 206 ~agfGNr~tDv~aY~~vGIp~~ 227 (567)
---+|| =..+=+.+|+|.-
T Consensus 140 ed~~~n---a~~iAk~~~~~vi 158 (194)
T COG5663 140 EDSHDN---AGQIAKNAGIPVI 158 (194)
T ss_pred cccCch---HHHHHHhcCCcEE
Confidence 333444 4566667888753
No 209
>PLN02382 probable sucrose-phosphatase
Probab=91.26 E-value=0.27 Score=53.86 Aligned_cols=51 Identities=14% Similarity=0.208 Sum_probs=35.1
Q ss_pred CeEEEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHCCceEEEEccCcccch
Q psy12533 358 DKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQS 416 (567)
Q Consensus 358 ~kiVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa 416 (567)
.-+|+||+|||+..++ +. +.-+-.-...++.+..++|-.+++.|||+..+.
T Consensus 9 ~~lI~sDLDGTLL~~~--~~------~~~s~~~~~~l~~~~~~~gi~fv~aTGR~~~~~ 59 (413)
T PLN02382 9 RLMIVSDLDHTMVDHH--DP------ENLSLLRFNALWEAEYRHDSLLVFSTGRSPTLY 59 (413)
T ss_pred CEEEEEcCCCcCcCCC--Cc------cchhHHHHHHHHHHhhcCCeeEEEEcCCCHHHH
Confidence 3468999999999662 00 011223345566778889999999999986555
No 210
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=91.26 E-value=0.6 Score=46.12 Aligned_cols=91 Identities=24% Similarity=0.314 Sum_probs=54.5
Q ss_pred chhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCC--CCceecCCCchhhhhhhhhhccChhHHHHHH
Q psy12533 113 QNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLP--EGPMLLNPTSLLNAFHTEVIEKKPQEFKISC 190 (567)
Q Consensus 113 h~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP--~GPlllsp~~l~~al~REvi~k~p~~fKi~~ 190 (567)
=+||.++...+++.||++.-+|+++..-+. ..|+. ++|- -.-++. .+ ..-.+||+--.+..
T Consensus 91 ~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~---~~l~~-----~gl~~~F~~i~g-~~--------~~~~~KP~P~~l~~ 153 (220)
T COG0546 91 FPGVKELLAALKSAGYKLGIVTNKPERELD---ILLKA-----LGLADYFDVIVG-GD--------DVPPPKPDPEPLLL 153 (220)
T ss_pred CCCHHHHHHHHHhCCCeEEEEeCCcHHHHH---HHHHH-----hCCccccceEEc-CC--------CCCCCCcCHHHHHH
Confidence 358999999999999999999998776554 44443 2221 111111 11 22344554432222
Q ss_pred -HHHHHHhCCCCCCCEEEecCCcccchhhhhhcCCC
Q psy12533 191 -LRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIP 225 (567)
Q Consensus 191 -L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp 225 (567)
++.+... |. =....|++..|+.|=+++|++
T Consensus 154 ~~~~~~~~-~~----~~l~VGDs~~Di~aA~~Ag~~ 184 (220)
T COG0546 154 LLEKLGLD-PE----EALMVGDSLNDILAAKAAGVP 184 (220)
T ss_pred HHHHhCCC-hh----heEEECCCHHHHHHHHHcCCC
Confidence 2222111 10 145679999999999999966
No 211
>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear. It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....
Probab=91.25 E-value=0.3 Score=45.41 Aligned_cols=65 Identities=15% Similarity=0.261 Sum_probs=43.4
Q ss_pred cEEEEecCCccccCCcccccc------c-ccc-ccccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHH
Q psy12533 84 KIVISDIDGTITKSDVLGHVL------P-IMG-KDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQ 149 (567)
Q Consensus 84 kiVISDIDGTITkSD~lG~il------~-~lG-kDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~ 149 (567)
|++|.|+||||..+....+.- . ..+ .-+.+||+.++...+++. |.++-.|+.....++..-+.|.
T Consensus 1 k~LVlDLD~TLv~~~~~~~~~~~~~~~~~~~~~~v~~RP~l~~FL~~l~~~-~ev~i~T~~~~~ya~~v~~~ld 73 (159)
T PF03031_consen 1 KTLVLDLDGTLVHSSSKSPLPYDFKIIDQRGGYYVKLRPGLDEFLEELSKH-YEVVIWTSASEEYAEPVLDALD 73 (159)
T ss_dssp EEEEEE-CTTTEEEESSTCTT-SEEEETEEEEEEEEE-TTHHHHHHHHHHH-CEEEEE-SS-HHHHHHHHHHHT
T ss_pred CEEEEeCCCcEEEEeecCCCCcccceeccccceeEeeCchHHHHHHHHHHh-ceEEEEEeehhhhhhHHHHhhh
Confidence 689999999999887654320 0 011 126799999999999665 9999999987666666555554
No 212
>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear. It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....
Probab=91.21 E-value=0.28 Score=45.59 Aligned_cols=65 Identities=15% Similarity=0.273 Sum_probs=42.6
Q ss_pred eEEEEecCCccccCCcccccc------ccc-C-cCCcchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHH
Q psy12533 359 KIVISDIDGTITKSDVLGHVL------PIM-G-KDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQ 424 (567)
Q Consensus 359 kiVIsDIDGTiTkSD~~G~~~------~~~-G-kDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~ 424 (567)
|++|+|+||||..+....+.- ... + .-+.+||+.++...+.+. |.++-.|+.....+...-+.|.
T Consensus 1 k~LVlDLD~TLv~~~~~~~~~~~~~~~~~~~~~~v~~RP~l~~FL~~l~~~-~ev~i~T~~~~~ya~~v~~~ld 73 (159)
T PF03031_consen 1 KTLVLDLDGTLVHSSSKSPLPYDFKIIDQRGGYYVKLRPGLDEFLEELSKH-YEVVIWTSASEEYAEPVLDALD 73 (159)
T ss_dssp EEEEEE-CTTTEEEESSTCTT-SEEEETEEEEEEEEE-TTHHHHHHHHHHH-CEEEEE-SS-HHHHHHHHHHHT
T ss_pred CEEEEeCCCcEEEEeecCCCCcccceeccccceeEeeCchHHHHHHHHHHh-ceEEEEEeehhhhhhHHHHhhh
Confidence 689999999999887654320 000 1 124799999999998655 9999999987666655555543
No 213
>PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria. The function is not known.
Probab=91.20 E-value=1 Score=46.20 Aligned_cols=77 Identities=22% Similarity=0.380 Sum_probs=55.3
Q ss_pred CCeEEEEecCCccccCC-ccccc-cc-----cc--------------CcCC------------cchhHHHHHHHHHHCCc
Q psy12533 357 NDKIVISDIDGTITKSD-VLGHV-LP-----IM--------------GKDW------------AQNGVTRLFTKIKENGY 403 (567)
Q Consensus 357 ~~kiVIsDIDGTiTkSD-~~G~~-~~-----~~--------------GkDw------------~h~Gva~l~~~i~~nGY 403 (567)
.+-.||||||-||..+. .+|+- +- .+ -.+| +++.+.++++.+++.|.
T Consensus 19 ~~tLvvfDiDdTLi~~~~~lg~~~w~~~~~~~l~~~~~~~~~~~~~~~~~~l~~i~~~~~~~lie~~~~~~i~~lq~~~~ 98 (252)
T PF11019_consen 19 QDTLVVFDIDDTLITPKQPLGSPAWYQWQLGKLQKRGKSEYKAVECIFEEWLSLIFELRKMELIESDVPNIINSLQNKGI 98 (252)
T ss_pred CCeEEEEEcchhhhcCccccCCchhHHHHHHHHHhhccchhhhhhHHHHHHHHHHHhhcceEEcchhHHHHHHHHHHCCC
Confidence 56679999999998876 45531 10 01 1123 46677889999999999
Q ss_pred eEEEEccCcccchHHHHHHHHhcccCCccCCCC
Q psy12533 404 KLLYLSARAIGQSRVTREYLQSVKQEDLTLPEG 436 (567)
Q Consensus 404 ~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~G 436 (567)
.++=||+|+..+...|-..|+. .|..|-.-
T Consensus 99 ~v~alT~~~~~~~~~t~~~Lk~---~gi~fs~~ 128 (252)
T PF11019_consen 99 PVIALTARGPNMEDWTLRELKS---LGIDFSSS 128 (252)
T ss_pred cEEEEcCCChhhHHHHHHHHHH---CCCCcccc
Confidence 9999999998888777776665 55555543
No 214
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=90.98 E-value=0.9 Score=44.89 Aligned_cols=90 Identities=24% Similarity=0.342 Sum_probs=55.1
Q ss_pred chhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCC--CCceecCCCchhhhhhhhhhccChhHHHHHH
Q psy12533 388 QNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLP--EGPMLLNPTSLLNAFHTEVIEKKPQEFKISC 465 (567)
Q Consensus 388 h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP--~GPvl~spd~l~~al~rEvi~k~p~~fK~~~ 465 (567)
=+||.++...+++.||++--+|+++..-+ +..|+. +++- -.-++. .+ ..-.+||+--.+..
T Consensus 91 ~~gv~e~L~~L~~~g~~l~i~T~k~~~~~---~~~l~~-----~gl~~~F~~i~g-~~--------~~~~~KP~P~~l~~ 153 (220)
T COG0546 91 FPGVKELLAALKSAGYKLGIVTNKPEREL---DILLKA-----LGLADYFDVIVG-GD--------DVPPPKPDPEPLLL 153 (220)
T ss_pred CCCHHHHHHHHHhCCCeEEEEeCCcHHHH---HHHHHH-----hCCccccceEEc-CC--------CCCCCCcCHHHHHH
Confidence 46899999999999999999999887666 444444 2221 111111 12 22244553332222
Q ss_pred -HHHHHhhCCCCCCC-EEEecCCCcccHHhHHHcCCC
Q psy12533 466 -LRDIMALFPPNTQP-FYAGYGNKVNDVWSYQAVGIP 500 (567)
Q Consensus 466 -L~~i~~lf~~~~~p-f~agfGNr~tDv~aY~~vGIp 500 (567)
++.+.. . | =....|++..|+.|=+++|++
T Consensus 154 ~~~~~~~----~--~~~~l~VGDs~~Di~aA~~Ag~~ 184 (220)
T COG0546 154 LLEKLGL----D--PEEALMVGDSLNDILAAKAAGVP 184 (220)
T ss_pred HHHHhCC----C--hhheEEECCCHHHHHHHHHcCCC
Confidence 332222 1 2 134789999999999999976
No 215
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=90.72 E-value=1.1 Score=43.00 Aligned_cols=94 Identities=17% Similarity=0.270 Sum_probs=58.4
Q ss_pred cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCC--CceecCCCchhhhhhhhhhccChhHHHHH
Q psy12533 387 AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPE--GPMLLNPTSLLNAFHTEVIEKKPQEFKIS 464 (567)
Q Consensus 387 ~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~--GPvl~spd~l~~al~rEvi~k~p~~fK~~ 464 (567)
..||+.++.+.++++||++.-+|+.+.. .++.+|+. .++.. ..++.+.+ .- .-.++|+.|...
T Consensus 86 ~~~g~~~~L~~l~~~g~~~~i~S~~~~~---~~~~~l~~-----~~l~~~f~~~~~~~~-~~------~~Kp~p~~~~~~ 150 (213)
T TIGR01449 86 VFPGVEATLGALRAKGLRLGLVTNKPTP---LARPLLEL-----LGLAKYFSVLIGGDS-LA------QRKPHPDPLLLA 150 (213)
T ss_pred cCCCHHHHHHHHHHCCCeEEEEeCCCHH---HHHHHHHH-----cCcHhhCcEEEecCC-CC------CCCCChHHHHHH
Confidence 4679999999999999999999997553 34666666 33321 12222221 10 013345655543
Q ss_pred HHHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCCC
Q psy12533 465 CLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPL 501 (567)
Q Consensus 465 ~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~ 501 (567)
+ +. ++....- ...+|++.+|+.+-+++|++.
T Consensus 151 ~-~~----~~~~~~~-~~~igDs~~d~~aa~~aG~~~ 181 (213)
T TIGR01449 151 A-ER----LGVAPQQ-MVYVGDSRVDIQAARAAGCPS 181 (213)
T ss_pred H-HH----cCCChhH-eEEeCCCHHHHHHHHHCCCeE
Confidence 3 22 2211112 346999999999999999975
No 216
>PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria. The function is not known.
Probab=90.68 E-value=0.52 Score=48.37 Aligned_cols=76 Identities=22% Similarity=0.390 Sum_probs=54.7
Q ss_pred CCcEEEEecCCccccCC-ccccc-c-----ccc--------------cccc------------cchhHHHHHHHHHHCCc
Q psy12533 82 NDKIVISDIDGTITKSD-VLGHV-L-----PIM--------------GKDW------------AQNGVTRLFTKIKENGY 128 (567)
Q Consensus 82 ~~kiVISDIDGTITkSD-~lG~i-l-----~~l--------------GkDw------------th~GVa~Ly~~i~~nGY 128 (567)
.+-.||+|||-||..+. .+|+- + ..+ -.+| +++.+.++.+.+++.|.
T Consensus 19 ~~tLvvfDiDdTLi~~~~~lg~~~w~~~~~~~l~~~~~~~~~~~~~~~~~~l~~i~~~~~~~lie~~~~~~i~~lq~~~~ 98 (252)
T PF11019_consen 19 QDTLVVFDIDDTLITPKQPLGSPAWYQWQLGKLQKRGKSEYKAVECIFEEWLSLIFELRKMELIESDVPNIINSLQNKGI 98 (252)
T ss_pred CCeEEEEEcchhhhcCccccCCchhHHHHHHHHHhhccchhhhhhHHHHHHHHHHHhhcceEEcchhHHHHHHHHHHCCC
Confidence 34479999999998876 45541 0 001 1123 35577788999999999
Q ss_pred eEEEEccCcccchHHHHHHHHhcccCCccCCC
Q psy12533 129 KLLYLSARAIGQSRVTREYLQSVKQEDLTLPE 160 (567)
Q Consensus 129 ~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~ 160 (567)
+++=||+|+..+...|-..|+. .|..|-.
T Consensus 99 ~v~alT~~~~~~~~~t~~~Lk~---~gi~fs~ 127 (252)
T PF11019_consen 99 PVIALTARGPNMEDWTLRELKS---LGIDFSS 127 (252)
T ss_pred cEEEEcCCChhhHHHHHHHHHH---CCCCccc
Confidence 9999999999998888888877 4444443
No 217
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=90.53 E-value=2.5 Score=40.81 Aligned_cols=95 Identities=18% Similarity=0.277 Sum_probs=57.2
Q ss_pred cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCC-ceecCCCchhhhhhhhhhccChhHHHHHH
Q psy12533 387 AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEG-PMLLNPTSLLNAFHTEVIEKKPQEFKISC 465 (567)
Q Consensus 387 ~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~G-Pvl~spd~l~~al~rEvi~k~p~~fK~~~ 465 (567)
..+|+.++...++++|+++..+|+.+.... +.+++. ++|..- ..+++.+.. ....++|+.|+..
T Consensus 94 ~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~---~~~l~~-----~~l~~~f~~~~~~~~~------~~~kp~~~~~~~~- 158 (226)
T PRK13222 94 LYPGVKETLAALKAAGYPLAVVTNKPTPFV---APLLEA-----LGIADYFSVVIGGDSL------PNKKPDPAPLLLA- 158 (226)
T ss_pred cCCCHHHHHHHHHHCCCeEEEEeCCCHHHH---HHHHHH-----cCCccCccEEEcCCCC------CCCCcChHHHHHH-
Confidence 347999999999999999999999875433 555555 333210 011111111 1122344544443
Q ss_pred HHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCCC
Q psy12533 466 LRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPL 501 (567)
Q Consensus 466 L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~ 501 (567)
...+...... ...+|++.+|+.+=+++|++.
T Consensus 159 ----~~~~~~~~~~-~i~igD~~~Di~~a~~~g~~~ 189 (226)
T PRK13222 159 ----CEKLGLDPEE-MLFVGDSRNDIQAARAAGCPS 189 (226)
T ss_pred ----HHHcCCChhh-eEEECCCHHHHHHHHHCCCcE
Confidence 2222222222 347999999999999999964
No 218
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=90.43 E-value=0.36 Score=47.96 Aligned_cols=39 Identities=15% Similarity=0.249 Sum_probs=30.4
Q ss_pred ccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcc
Q psy12533 111 WAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVK 152 (567)
Q Consensus 111 wth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~ 152 (567)
.-.||.-++|..++++|-+++-+|| ||--..+..|+++.
T Consensus 73 ~Idp~fKef~e~ike~di~fiVvSs---Gm~~fI~~lfe~iv 111 (220)
T COG4359 73 KIDPGFKEFVEWIKEHDIPFIVVSS---GMDPFIYPLFEGIV 111 (220)
T ss_pred ccCccHHHHHHHHHHcCCCEEEEeC---CCchHHHHHHHhhc
Confidence 4566777888888999999999998 77777777777654
No 219
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=89.92 E-value=0.48 Score=55.32 Aligned_cols=60 Identities=12% Similarity=0.194 Sum_probs=43.5
Q ss_pred CCCeEEEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHC-CceEEEEccCcccchHHHHHHHH
Q psy12533 356 WNDKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKEN-GYKLLYLSARAIGQSRVTREYLQ 424 (567)
Q Consensus 356 ~~~kiVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~n-GY~iiYLSaRpi~qa~~Tr~~L~ 424 (567)
...+++++|+||||+..+... ...-.++.+.+..+++.+. |..++.+|||+.... +.|+.
T Consensus 490 ~~~rLi~~D~DGTL~~~~~~~------~~~~~~~~~~~~L~~L~~d~g~~V~ivSGR~~~~l---~~~~~ 550 (726)
T PRK14501 490 ASRRLLLLDYDGTLVPFAPDP------ELAVPDKELRDLLRRLAADPNTDVAIISGRDRDTL---ERWFG 550 (726)
T ss_pred ccceEEEEecCccccCCCCCc------ccCCCCHHHHHHHHHHHcCCCCeEEEEeCCCHHHH---HHHhC
Confidence 456899999999999642110 0113467899999999995 999999999985433 45554
No 220
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=89.71 E-value=1.7 Score=42.25 Aligned_cols=96 Identities=13% Similarity=0.089 Sum_probs=58.8
Q ss_pred cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccC-CccCCCCceecCCCchhhhhhhhhhccChhHHHHHH
Q psy12533 387 AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQE-DLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISC 465 (567)
Q Consensus 387 ~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~-~~~lP~GPvl~spd~l~~al~rEvi~k~p~~fK~~~ 465 (567)
.-+|+.++...+++.||++.-+|+.+..... ..|+.+.=. +.-|+ .++++.+ .. ...++|+.|..++
T Consensus 88 l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~---~~l~~~~l~~~~~f~--~i~~~~~-~~------~~KP~p~~~~~a~ 155 (220)
T TIGR03351 88 ALPGAEEAFRSLRSSGIKVALTTGFDRDTAE---RLLEKLGWTVGDDVD--AVVCPSD-VA------AGRPAPDLILRAM 155 (220)
T ss_pred cCCCHHHHHHHHHHCCCEEEEEeCCchHHHH---HHHHHhhhhhhccCC--EEEcCCc-CC------CCCCCHHHHHHHH
Confidence 4568999999999999999999998766553 344331100 01132 3444433 21 1234556666432
Q ss_pred HHHHHhhCCCC--CCCEEEecCCCcccHHhHHHcCCCC
Q psy12533 466 LRDIMALFPPN--TQPFYAGYGNKVNDVWSYQAVGIPL 501 (567)
Q Consensus 466 L~~i~~lf~~~--~~pf~agfGNr~tDv~aY~~vGIp~ 501 (567)
+. +... .. ..-+|++.+|+.+=+++|++.
T Consensus 156 -~~----~~~~~~~~--~~~igD~~~Di~aa~~aG~~~ 186 (220)
T TIGR03351 156 -EL----TGVQDVQS--VAVAGDTPNDLEAGINAGAGA 186 (220)
T ss_pred -HH----cCCCChhH--eEEeCCCHHHHHHHHHCCCCe
Confidence 22 2111 22 346789999999999999994
No 221
>PLN03017 trehalose-phosphatase
Probab=89.61 E-value=0.51 Score=51.15 Aligned_cols=57 Identities=21% Similarity=0.346 Sum_probs=42.6
Q ss_pred EeeeCCCeEEEEecCCccccCCcccccccccC-cC--CcchhHHHHHHHHHHCCceEEEEccCcccchHH
Q psy12533 352 FKWRWNDKIVISDIDGTITKSDVLGHVLPIMG-KD--WAQNGVTRLFTKIKENGYKLLYLSARAIGQSRV 418 (567)
Q Consensus 352 ylw~~~~kiVIsDIDGTiTkSD~~G~~~~~~G-kD--w~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~ 418 (567)
.+......+|++|+||||+ |++. .+ ...+...+..++++ +|+++.-+|||+......
T Consensus 105 ~~~~~k~~llflD~DGTL~---------Piv~~p~~a~i~~~~~~aL~~La-~~~~vaIvSGR~~~~l~~ 164 (366)
T PLN03017 105 EASRGKQIVMFLDYDGTLS---------PIVDDPDKAFMSSKMRRTVKKLA-KCFPTAIVTGRCIDKVYN 164 (366)
T ss_pred HHhcCCCeEEEEecCCcCc---------CCcCCcccccCCHHHHHHHHHHh-cCCcEEEEeCCCHHHHHH
Confidence 3345566778999999998 2221 11 35678889999999 889999999999876643
No 222
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=89.55 E-value=1.1 Score=43.54 Aligned_cols=20 Identities=15% Similarity=0.028 Sum_probs=17.0
Q ss_pred EecCCCcccHHhHHHcCCCC
Q psy12533 482 AGYGNKVNDVWSYQAVGIPL 501 (567)
Q Consensus 482 agfGNr~tDv~aY~~vGIp~ 501 (567)
.-+|++.+|+.+=+++|++.
T Consensus 163 l~igDs~~di~aA~~aG~~~ 182 (221)
T PRK10563 163 ILVDDSSAGAQSGIAAGMEV 182 (221)
T ss_pred EEEeCcHhhHHHHHHCCCEE
Confidence 34678899999999999974
No 223
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=89.46 E-value=1.3 Score=43.94 Aligned_cols=125 Identities=21% Similarity=0.338 Sum_probs=82.0
Q ss_pred CCeEEEEecCCccccCCc---ccc---------------cccccCcCC-----cchhHHHHHHHHHHCCceEEEEccCcc
Q psy12533 357 NDKIVISDIDGTITKSDV---LGH---------------VLPIMGKDW-----AQNGVTRLFTKIKENGYKLLYLSARAI 413 (567)
Q Consensus 357 ~~kiVIsDIDGTiTkSD~---~G~---------------~~~~~GkDw-----~h~Gva~l~~~i~~nGY~iiYLSaRpi 413 (567)
-+-.|-||||.|+.-|.- .|. +|..|..-| +..-+.+|-.+=+..|=+|.++|+|.-
T Consensus 62 ~Pi~VsFDIDDTvLFsSp~F~~Gk~~~sPgs~DyLknq~FW~~vn~g~D~~SIPKevA~qLI~MHq~RGD~i~FvTGRt~ 141 (237)
T COG3700 62 PPIAVSFDIDDTVLFSSPGFWRGKKYFSPGSEDYLKNQVFWEKVNNGWDEFSIPKEVARQLIDMHQRRGDAIYFVTGRTP 141 (237)
T ss_pred CCeeEeeccCCeeEecccccccCccccCCChHHhhcCHHHHHHHhcCCccccchHHHHHHHHHHHHhcCCeEEEEecCCC
Confidence 344589999999987643 331 223333333 223445677777889999999999998
Q ss_pred cchHHHHHHHHhcccCCccC-CCCceecCCCchhhhhhhhhhccCh-hHHHHHHHHHHHhhCCCCCCCEEEecCCCcccH
Q psy12533 414 GQSRVTREYLQSVKQEDLTL-PEGPMLLNPTSLLNAFHTEVIEKKP-QEFKISCLRDIMALFPPNTQPFYAGYGNKVNDV 491 (567)
Q Consensus 414 ~qa~~Tr~~L~~~~Q~~~~l-P~GPvl~spd~l~~al~rEvi~k~p-~~fK~~~L~~i~~lf~~~~~pf~agfGNr~tDv 491 (567)
+-.+.+-.-|.. +.++ -+-||.+..|. .+| +.-|..+|.+ +..- -=||+.++|+
T Consensus 142 gk~d~vsk~Lak----~F~i~~m~pv~f~Gdk-----------~k~~qy~Kt~~i~~-------~~~~--IhYGDSD~Di 197 (237)
T COG3700 142 GKTDTVSKTLAK----NFHITNMNPVIFAGDK-----------PKPGQYTKTQWIQD-------KNIR--IHYGDSDNDI 197 (237)
T ss_pred CcccccchhHHh----hcccCCCcceeeccCC-----------CCcccccccHHHHh-------cCce--EEecCCchhh
Confidence 877777666653 1222 23466665542 245 4447776653 2222 3589999999
Q ss_pred HhHHHcCCCCCCEE
Q psy12533 492 WSYQAVGIPLSRIF 505 (567)
Q Consensus 492 ~aY~~vGIp~~rIF 505 (567)
.|=+.+|+-.=||.
T Consensus 198 ~AAkeaG~RgIRil 211 (237)
T COG3700 198 TAAKEAGARGIRIL 211 (237)
T ss_pred hHHHhcCccceeEE
Confidence 99999999888884
No 224
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=89.44 E-value=0.81 Score=45.69 Aligned_cols=116 Identities=20% Similarity=0.182 Sum_probs=77.5
Q ss_pred cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhccCh-hHHHHHH
Q psy12533 112 AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKP-QEFKISC 190 (567)
Q Consensus 112 th~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GPlllsp~~l~~al~REvi~k~p-~~fKi~~ 190 (567)
-.+|+.+|...++++|++++-+||-+...++...+-|.--.- -+-.+...++. +...++...- .+-|...
T Consensus 78 l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~------~an~l~~~dG~---ltG~v~g~~~~~~~K~~~ 148 (212)
T COG0560 78 LTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYV------VANELEIDDGK---LTGRVVGPICDGEGKAKA 148 (212)
T ss_pred CCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchh------eeeEEEEeCCE---EeceeeeeecCcchHHHH
Confidence 356889999999999999999999998887777776642100 11222222221 1111211111 1358888
Q ss_pred HHHHHHhCCCCCCCEEEecCCcccchhhhhhcCCCCCCEEEEcCCCceecc
Q psy12533 191 LRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLSRIFTINSRGEVKHE 241 (567)
Q Consensus 191 L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~~rIF~In~~g~~~~~ 241 (567)
|+++....+-. .-=..+||+..+|.-+-+.+|.+ +.+||++++...
T Consensus 149 l~~~~~~~g~~-~~~~~a~gDs~nDlpml~~ag~~----ia~n~~~~l~~~ 194 (212)
T COG0560 149 LRELAAELGIP-LEETVAYGDSANDLPMLEAAGLP----IAVNPKPKLRAL 194 (212)
T ss_pred HHHHHHHcCCC-HHHeEEEcCchhhHHHHHhCCCC----eEeCcCHHHHHH
Confidence 88888765432 11367999999999999999988 578999887654
No 225
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=89.40 E-value=1.1 Score=43.49 Aligned_cols=92 Identities=15% Similarity=0.197 Sum_probs=54.2
Q ss_pred hhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCC--CceecCCCchhhhhhhhhhccChhHHHHHHH
Q psy12533 114 NGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPE--GPMLLNPTSLLNAFHTEVIEKKPQEFKISCL 191 (567)
Q Consensus 114 ~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~--GPlllsp~~l~~al~REvi~k~p~~fKi~~L 191 (567)
+|+.++.+.++++|+++.-+|+.+. ..++..|+. .++.. ..++.+.+ . ++ ...+|+.|...+
T Consensus 85 ~g~~~~l~~L~~~g~~~~i~S~~~~---~~~~~~l~~-----~gl~~~f~~i~~~~~-~----~~--~Kp~p~~~~~~~- 148 (214)
T PRK13288 85 ETVYETLKTLKKQGYKLGIVTTKMR---DTVEMGLKL-----TGLDEFFDVVITLDD-V----EH--AKPDPEPVLKAL- 148 (214)
T ss_pred cCHHHHHHHHHHCCCeEEEEeCCCH---HHHHHHHHH-----cCChhceeEEEecCc-C----CC--CCCCcHHHHHHH-
Confidence 5888999999999999999999763 344555555 33321 11222111 1 00 123444454333
Q ss_pred HHHHHhCCCCCCCEEEecCCcccchhhhhhcCCCC
Q psy12533 192 RDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPL 226 (567)
Q Consensus 192 ~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~ 226 (567)
..+.-...- ..-+|++.+|+.+=+++|++.
T Consensus 149 ----~~~~~~~~~-~~~iGDs~~Di~aa~~aG~~~ 178 (214)
T PRK13288 149 ----ELLGAKPEE-ALMVGDNHHDILAGKNAGTKT 178 (214)
T ss_pred ----HHcCCCHHH-EEEECCCHHHHHHHHHCCCeE
Confidence 222211111 346899999999999999964
No 226
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=89.33 E-value=2.4 Score=44.54 Aligned_cols=120 Identities=17% Similarity=0.147 Sum_probs=71.3
Q ss_pred CCcEEEEecCCccccCCccccc---cccccccccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccC
Q psy12533 82 NDKIVISDIDGTITKSDVLGHV---LPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTL 158 (567)
Q Consensus 82 ~~kiVISDIDGTITkSD~lG~i---l~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~L 158 (567)
.-|+||+|.|+|+.. +++|.- .-.++ -.++|+.++...+++.|+++--+|..+. ..++..|+. |
T Consensus 2 ~~k~~v~DlDnTlw~-gv~~e~g~~~i~~~--~~~~~~~e~L~~L~~~Gi~lai~S~n~~---~~a~~~l~~-----~-- 68 (320)
T TIGR01686 2 ALKVLVLDLDNTLWG-GVLGEDGIDNLNLS--PLHKTLQEKIKTLKKQGFLLALASKNDE---DDAKKVFER-----R-- 68 (320)
T ss_pred CeEEEEEcCCCCCCC-CEEccCCccccccC--ccHHHHHHHHHHHHhCCCEEEEEcCCCH---HHHHHHHHh-----C--
Confidence 458999999999984 333321 11112 2478999999999999999999999765 344566654 1
Q ss_pred CCCceecCCCchhhhhhhhhhccChhHHHHHHHHHHHHhCCCCCCCEEEecCCcccchhhhhhcCC
Q psy12533 159 PEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGI 224 (567)
Q Consensus 159 P~GPlllsp~~l~~al~REvi~k~p~~fKi~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGI 224 (567)
| +-+.+ + ..|.+. .+..+| |-+.+..+...+.-+..- ..-+|+...|+.+-++.+.
T Consensus 69 ~-~~~~~-~-~~f~~~---~~~~~p---k~~~i~~~~~~l~i~~~~-~vfidD~~~d~~~~~~~lp 124 (320)
T TIGR01686 69 K-DFILQ-A-EDFDAR---SINWGP---KSESLRKIAKKLNLGTDS-FLFIDDNPAERANVKITLP 124 (320)
T ss_pred c-cccCc-H-HHeeEE---EEecCc---hHHHHHHHHHHhCCCcCc-EEEECCCHHHHHHHHHHCC
Confidence 1 10111 1 122221 122344 555555555444322223 4467888999998888654
No 227
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=89.08 E-value=0.59 Score=54.54 Aligned_cols=52 Identities=13% Similarity=0.222 Sum_probs=39.2
Q ss_pred CCcEEEEecCCccccCCccccccccccccccchhHHHHHHHHHHC-CceEEEEccCccc
Q psy12533 82 NDKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKEN-GYKLLYLSARAIG 139 (567)
Q Consensus 82 ~~kiVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~n-GY~ilYLSaRpi~ 139 (567)
..+++++|+||||+..+... ...-.++...+..+++.+. |..++.+|||+..
T Consensus 491 ~~rLi~~D~DGTL~~~~~~~------~~~~~~~~~~~~L~~L~~d~g~~V~ivSGR~~~ 543 (726)
T PRK14501 491 SRRLLLLDYDGTLVPFAPDP------ELAVPDKELRDLLRRLAADPNTDVAIISGRDRD 543 (726)
T ss_pred cceEEEEecCccccCCCCCc------ccCCCCHHHHHHHHHHHcCCCCeEEEEeCCCHH
Confidence 45799999999999743111 0113467889999999995 9999999999843
No 228
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=88.82 E-value=1.8 Score=42.41 Aligned_cols=97 Identities=15% Similarity=0.174 Sum_probs=58.5
Q ss_pred chhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCC--CceecCCCchhhhhhhhhhccChhHHHHHH
Q psy12533 388 QNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPE--GPMLLNPTSLLNAFHTEVIEKKPQEFKISC 465 (567)
Q Consensus 388 h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~--GPvl~spd~l~~al~rEvi~k~p~~fK~~~ 465 (567)
.||+.++...++++||++.-+|+.+.. .++..++. .++.. ..++.+.+ . ....++|+.|...|
T Consensus 94 ~~g~~~~l~~l~~~g~~~~i~S~~~~~---~~~~~l~~-----~~l~~~f~~~~~~~~-~------~~~Kp~~~~~~~~~ 158 (222)
T PRK10826 94 LPGVREALALCKAQGLKIGLASASPLH---MLEAVLTM-----FDLRDYFDALASAEK-L------PYSKPHPEVYLNCA 158 (222)
T ss_pred CCCHHHHHHHHHHCCCeEEEEeCCcHH---HHHHHHHh-----CcchhcccEEEEccc-C------CCCCCCHHHHHHHH
Confidence 579999999999999999999996543 34555554 22211 11222211 1 11245566664433
Q ss_pred HHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCCCCCEEEE
Q psy12533 466 LRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLSRIFTI 507 (567)
Q Consensus 466 L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~~rIF~I 507 (567)
..+.-...- ...+|++.+|+.+-+++|++. |++-
T Consensus 159 -----~~~~~~~~~-~~~igDs~~Di~aA~~aG~~~--i~v~ 192 (222)
T PRK10826 159 -----AKLGVDPLT-CVALEDSFNGMIAAKAARMRS--IVVP 192 (222)
T ss_pred -----HHcCCCHHH-eEEEcCChhhHHHHHHcCCEE--EEec
Confidence 211111111 357899999999999999964 5443
No 229
>COG5663 Uncharacterized conserved protein [Function unknown]
Probab=88.81 E-value=0.99 Score=44.28 Aligned_cols=79 Identities=24% Similarity=0.311 Sum_probs=51.3
Q ss_pred CceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhccChhHHHHHHHHHHH-hhCCCCCCCE
Q psy12533 402 GYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIM-ALFPPNTQPF 480 (567)
Q Consensus 402 GY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GPvl~spd~l~~al~rEvi~k~p~~fK~~~L~~i~-~lf~~~~~pf 480 (567)
-.+++|.|||.--....|.+||.. .++| -+.++ .+.... |.+|.+... ++|.+
T Consensus 87 ~~~L~~itar~~dl~~iT~~~l~~-----q~ih-------~~~l~------i~g~h~---KV~~vrth~idlf~e----- 140 (194)
T COG5663 87 EHRLIYITARKADLTRITYAWLFI-----QNIH-------YDHLE------IVGLHH---KVEAVRTHNIDLFFE----- 140 (194)
T ss_pred hceeeeeehhhHHHHHHHHHHHHH-----hccc-------hhhhh------hhcccc---cchhhHhhccCcccc-----
Confidence 379999999999999999999988 7787 34332 222222 677877643 43333
Q ss_pred EEecCCCcccHHhHHHcCCCCCCEEEEcC-CCcc
Q psy12533 481 YAGYGNKVNDVWSYQAVGIPLSRIFTINS-RGEV 513 (567)
Q Consensus 481 ~agfGNr~tDv~aY~~vGIp~~rIF~In~-~g~~ 513 (567)
--+|| =..+=+.+|+|. ..||. .|++
T Consensus 141 -d~~~n---a~~iAk~~~~~v---ilins~ynRk 167 (194)
T COG5663 141 -DSHDN---AGQIAKNAGIPV---ILINSPYNRK 167 (194)
T ss_pred -ccCch---HHHHHHhcCCcE---EEecCccccc
Confidence 33444 466667788875 34455 3444
No 230
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=88.75 E-value=1.3 Score=42.64 Aligned_cols=94 Identities=17% Similarity=0.260 Sum_probs=57.2
Q ss_pred cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCC--CceecCCCchhhhhhhhhhccChhHHHHH
Q psy12533 112 AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPE--GPMLLNPTSLLNAFHTEVIEKKPQEFKIS 189 (567)
Q Consensus 112 th~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~--GPlllsp~~l~~al~REvi~k~p~~fKi~ 189 (567)
..+|+.++.+.++++||++..+|+.+. ..++.+|+. .++.. ..++.+.+ .- ...++|+.|...
T Consensus 86 ~~~g~~~~L~~l~~~g~~~~i~S~~~~---~~~~~~l~~-----~~l~~~f~~~~~~~~-~~------~~Kp~p~~~~~~ 150 (213)
T TIGR01449 86 VFPGVEATLGALRAKGLRLGLVTNKPT---PLARPLLEL-----LGLAKYFSVLIGGDS-LA------QRKPHPDPLLLA 150 (213)
T ss_pred cCCCHHHHHHHHHHCCCeEEEEeCCCH---HHHHHHHHH-----cCcHhhCcEEEecCC-CC------CCCCChHHHHHH
Confidence 456999999999999999999999654 445666665 33321 11222221 10 012334444433
Q ss_pred HHHHHHHhCCCCCCCEEEecCCcccchhhhhhcCCCC
Q psy12533 190 CLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPL 226 (567)
Q Consensus 190 ~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~ 226 (567)
...+.-...- ...+|++.+|+.+-+++|++.
T Consensus 151 -----~~~~~~~~~~-~~~igDs~~d~~aa~~aG~~~ 181 (213)
T TIGR01449 151 -----AERLGVAPQQ-MVYVGDSRVDIQAARAAGCPS 181 (213)
T ss_pred -----HHHcCCChhH-eEEeCCCHHHHHHHHHCCCeE
Confidence 3333211111 456999999999999999975
No 231
>PLN03017 trehalose-phosphatase
Probab=88.58 E-value=0.63 Score=50.47 Aligned_cols=54 Identities=22% Similarity=0.398 Sum_probs=40.0
Q ss_pred ecCCCcEEEEecCCccccCCcccccccccc---ccccchhHHHHHHHHHHCCceEEEEccCcccchH
Q psy12533 79 WRWNDKIVISDIDGTITKSDVLGHVLPIMG---KDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSR 142 (567)
Q Consensus 79 w~~~~kiVISDIDGTITkSD~lG~il~~lG---kDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~ 142 (567)
......+|++|+||||+ |++. .....+...+..++++ +|+++.-+|||+.....
T Consensus 107 ~~~k~~llflD~DGTL~---------Piv~~p~~a~i~~~~~~aL~~La-~~~~vaIvSGR~~~~l~ 163 (366)
T PLN03017 107 SRGKQIVMFLDYDGTLS---------PIVDDPDKAFMSSKMRRTVKKLA-KCFPTAIVTGRCIDKVY 163 (366)
T ss_pred hcCCCeEEEEecCCcCc---------CCcCCcccccCCHHHHHHHHHHh-cCCcEEEEeCCCHHHHH
Confidence 34455688899999999 1111 1135678888899999 88999999999986553
No 232
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=88.55 E-value=2 Score=48.79 Aligned_cols=105 Identities=14% Similarity=0.239 Sum_probs=72.5
Q ss_pred CCeEEEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCC
Q psy12533 357 NDKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEG 436 (567)
Q Consensus 357 ~~kiVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~G 436 (567)
+..+|..+.||++..- + .=+|-.+||+.++.+.++++||++.-+|+.+...+ +..++. .+++
T Consensus 384 g~~~~~~~~~~~~~g~-----~---~~~d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a---~~ia~~-----lgi~-- 445 (562)
T TIGR01511 384 GSTSVLVAVNGELAGV-----F---ALEDQLRPEAKEVIQALKRRGIEPVMLTGDNRKTA---KAVAKE-----LGIN-- 445 (562)
T ss_pred CCEEEEEEECCEEEEE-----E---EecccccHHHHHHHHHHHHcCCeEEEEcCCCHHHH---HHHHHH-----cCCc--
Confidence 3455677778876432 1 11577899999999999999999999999876544 444445 4453
Q ss_pred ceecCCCchhhhhhhhhhccChhHHHHHHHHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCC
Q psy12533 437 PMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIP 500 (567)
Q Consensus 437 Pvl~spd~l~~al~rEvi~k~p~~fK~~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp 500 (567)
++ . ++ .| .=|.+.++.++. .... .+.+|+..+|+.|-+++||.
T Consensus 446 -~~-------~----~~---~p-~~K~~~v~~l~~----~~~~-v~~VGDg~nD~~al~~A~vg 488 (562)
T TIGR01511 446 -VR-------A----EV---LP-DDKAALIKELQE----KGRV-VAMVGDGINDAPALAQADVG 488 (562)
T ss_pred -EE-------c----cC---Ch-HHHHHHHHHHHH----cCCE-EEEEeCCCccHHHHhhCCEE
Confidence 11 1 11 23 236777777766 2222 67899999999999999984
No 233
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=88.42 E-value=0.91 Score=45.63 Aligned_cols=51 Identities=16% Similarity=0.259 Sum_probs=35.7
Q ss_pred CCeEEEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHC-CceEEEEccCcc
Q psy12533 357 NDKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKEN-GYKLLYLSARAI 413 (567)
Q Consensus 357 ~~kiVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~n-GY~iiYLSaRpi 413 (567)
...++++|+||||+... +.-......+++.++.+++.+. +..+..+|||+.
T Consensus 2 ~~~~l~lD~DGTL~~~~------~~p~~~~~~~~~~~~L~~L~~~~~~~v~ivSGR~~ 53 (244)
T TIGR00685 2 RKRAFFFDYDGTLSEIV------PDPDAAVVSDRLLTILQKLAARPHNAIWIISGRKF 53 (244)
T ss_pred CcEEEEEecCccccCCc------CCCcccCCCHHHHHHHHHHHhCCCCeEEEEECCCh
Confidence 35679999999999631 0011123567899999988776 456678999965
No 234
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=87.89 E-value=2.2 Score=48.30 Aligned_cols=103 Identities=19% Similarity=0.307 Sum_probs=71.6
Q ss_pred eEEEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHCC-ceEEEEccCcccchHHHHHHHHhcccCCccCCCCc
Q psy12533 359 KIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENG-YKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGP 437 (567)
Q Consensus 359 kiVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~nG-Y~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GP 437 (567)
.++.+..||++... + .-+|-.+||+.++.++++++| |++.-+|+.+...+ +..++. .++.+
T Consensus 365 ~~~~v~~~~~~~g~-----i---~~~d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a---~~i~~~-----lgi~~-- 426 (556)
T TIGR01525 365 TVVFVAVDGELLGV-----I---ALRDQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAA---EAVAAE-----LGIDE-- 426 (556)
T ss_pred EEEEEEECCEEEEE-----E---EecccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHH---HHHHHH-----hCCCe--
Confidence 44556677754432 2 236789999999999999999 99999999877655 555555 44431
Q ss_pred eecCCCchhhhhhhhhhccChhHHHHHHHHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCC
Q psy12533 438 MLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGI 499 (567)
Q Consensus 438 vl~spd~l~~al~rEvi~k~p~~fK~~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGI 499 (567)
.|. ++ .| +-|.++++.++. .. .-.+.+|+..+|+.|-+++||
T Consensus 427 -------~f~----~~---~p-~~K~~~v~~l~~----~~-~~v~~vGDg~nD~~al~~A~v 468 (556)
T TIGR01525 427 -------VHA----EL---LP-EDKLAIVKELQE----EG-GVVAMVGDGINDAPALAAADV 468 (556)
T ss_pred -------eec----cC---CH-HHHHHHHHHHHH----cC-CEEEEEECChhHHHHHhhCCE
Confidence 121 11 22 246677888776 12 247889999999999999995
No 235
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=87.08 E-value=2.3 Score=40.95 Aligned_cols=94 Identities=17% Similarity=0.209 Sum_probs=56.0
Q ss_pred cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCC--CceecCCCchhhhhhhhhhccChhHHHHH
Q psy12533 387 AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPE--GPMLLNPTSLLNAFHTEVIEKKPQEFKIS 464 (567)
Q Consensus 387 ~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~--GPvl~spd~l~~al~rEvi~k~p~~fK~~ 464 (567)
..+|+.++.+.++++||++.-+|+.....+ +..|+. .++.. --++.+.+ .. .-.++|+.|+..
T Consensus 76 ~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~---~~~l~~-----~~l~~~f~~i~~~~~-~~------~~KP~~~~~~~~ 140 (205)
T TIGR01454 76 VFPGVPELLAELRADGVGTAIATGKSGPRA---RSLLEA-----LGLLPLFDHVIGSDE-VP------RPKPAPDIVREA 140 (205)
T ss_pred cCCCHHHHHHHHHHCCCeEEEEeCCchHHH---HHHHHH-----cCChhheeeEEecCc-CC------CCCCChHHHHHH
Confidence 457999999999999999999999765443 444544 23311 01222211 10 012334444433
Q ss_pred HHHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCCC
Q psy12533 465 CLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPL 501 (567)
Q Consensus 465 ~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~ 501 (567)
+ +. +.-...- ..-+|++.+|+.+=+++|++.
T Consensus 141 ~-~~----~~~~~~~-~l~igD~~~Di~aA~~~Gi~~ 171 (205)
T TIGR01454 141 L-RL----LDVPPED-AVMVGDAVTDLASARAAGTAT 171 (205)
T ss_pred H-HH----cCCChhh-eEEEcCCHHHHHHHHHcCCeE
Confidence 2 22 2211111 356899999999999999984
No 236
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=86.99 E-value=1.2 Score=40.23 Aligned_cols=94 Identities=19% Similarity=0.340 Sum_probs=57.4
Q ss_pred cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhccCh--hHHHHH
Q psy12533 387 AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKP--QEFKIS 464 (567)
Q Consensus 387 ~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GPvl~spd~l~~al~rEvi~k~p--~~fK~~ 464 (567)
..+|+.++.+.++++||++.-+|..+. ...+..|+.+.- ..+++ .++.+ -+.-..+| +.|+..
T Consensus 78 ~~~~~~~~L~~l~~~~~~~~i~Sn~~~---~~~~~~l~~~~~--~~~f~--------~i~~~--~~~~~~Kp~~~~~~~~ 142 (176)
T PF13419_consen 78 PYPGVRELLERLKAKGIPLVIVSNGSR---ERIERVLERLGL--DDYFD--------EIISS--DDVGSRKPDPDAYRRA 142 (176)
T ss_dssp ESTTHHHHHHHHHHTTSEEEEEESSEH---HHHHHHHHHTTH--GGGCS--------EEEEG--GGSSSSTTSHHHHHHH
T ss_pred hhhhhhhhhhhcccccceeEEeecCCc---cccccccccccc--ccccc--------ccccc--chhhhhhhHHHHHHHH
Confidence 577999999999999999999999864 444555555211 12232 22221 12222344 555433
Q ss_pred HHHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCCC
Q psy12533 465 CLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPL 501 (567)
Q Consensus 465 ~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~ 501 (567)
+ +.+ .+ ++ . - ..-+|++..|+.+=+++|+..
T Consensus 143 ~-~~~-~~-~p-~-~-~~~vgD~~~d~~~A~~~G~~~ 173 (176)
T PF13419_consen 143 L-EKL-GI-PP-E-E-ILFVGDSPSDVEAAKEAGIKT 173 (176)
T ss_dssp H-HHH-TS-SG-G-G-EEEEESSHHHHHHHHHTTSEE
T ss_pred H-HHc-CC-Cc-c-e-EEEEeCCHHHHHHHHHcCCeE
Confidence 2 222 11 11 1 2 357899999999999999864
No 237
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=86.82 E-value=2.8 Score=40.72 Aligned_cols=95 Identities=14% Similarity=0.124 Sum_probs=55.6
Q ss_pred hhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccC-CccCCCCceecCCCchhhhhhhhhhccChhHHHHHHHH
Q psy12533 114 NGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQE-DLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLR 192 (567)
Q Consensus 114 ~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~-~~~LP~GPlllsp~~l~~al~REvi~k~p~~fKi~~L~ 192 (567)
+|+.++...+++.||++.-+|+.+.... +..|+.+.=. +.-++ .++++.+ .. ...++|+.|..++
T Consensus 90 ~G~~~~L~~L~~~g~~~~ivT~~~~~~~---~~~l~~~~l~~~~~f~--~i~~~~~-~~------~~KP~p~~~~~a~-- 155 (220)
T TIGR03351 90 PGAEEAFRSLRSSGIKVALTTGFDRDTA---ERLLEKLGWTVGDDVD--AVVCPSD-VA------AGRPAPDLILRAM-- 155 (220)
T ss_pred CCHHHHHHHHHHCCCEEEEEeCCchHHH---HHHHHHhhhhhhccCC--EEEcCCc-CC------CCCCCHHHHHHHH--
Confidence 5889999999999999999999766544 3344431100 01122 2444432 11 1234445454332
Q ss_pred HHHHhCCCC-CCCEEEecCCcccchhhhhhcCCCC
Q psy12533 193 DIMALFPPN-TQPFYAGYGNKVNDVWSYQAVGIPL 226 (567)
Q Consensus 193 ~i~~lf~~~-~~pf~agfGNr~tDv~aY~~vGIp~ 226 (567)
..+.-. ... ..-+|++.+|+.+=+++|++.
T Consensus 156 ---~~~~~~~~~~-~~~igD~~~Di~aa~~aG~~~ 186 (220)
T TIGR03351 156 ---ELTGVQDVQS-VAVAGDTPNDLEAGINAGAGA 186 (220)
T ss_pred ---HHcCCCChhH-eEEeCCCHHHHHHHHHCCCCe
Confidence 222211 011 456778899999999999995
No 238
>PRK11590 hypothetical protein; Provisional
Probab=86.52 E-value=3.1 Score=40.83 Aligned_cols=110 Identities=11% Similarity=0.122 Sum_probs=65.7
Q ss_pred chhHHHHH-HHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCC-ceecCCCchhhhhhhhhhccCh-hHHHHH
Q psy12533 388 QNGVTRLF-TKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEG-PMLLNPTSLLNAFHTEVIEKKP-QEFKIS 464 (567)
Q Consensus 388 h~Gva~l~-~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~G-Pvl~spd~l~~al~rEvi~k~p-~~fK~~ 464 (567)
.|||.++. +++++.||+++-+|+.+...+. ..+.. .++=.| .++.+. +-.-+..++...+- -+=|..
T Consensus 97 ~pga~e~L~~~l~~~G~~l~IvSas~~~~~~---~il~~-----l~~~~~~~~i~t~--l~~~~tg~~~g~~c~g~~K~~ 166 (211)
T PRK11590 97 FPVVQERLTTYLLSSDADVWLITGSPQPLVE---QVYFD-----TPWLPRVNLIASQ--MQRRYGGWVLTLRCLGHEKVA 166 (211)
T ss_pred CccHHHHHHHHHHhCCCEEEEEeCCcHHHHH---HHHHH-----ccccccCceEEEE--EEEEEccEECCccCCChHHHH
Confidence 47888888 5678899999999999876654 33333 111001 123222 10011112211111 344666
Q ss_pred HHHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCCCCCEEEEcCCCcccc
Q psy12533 465 CLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLSRIFTINSRGEVKH 515 (567)
Q Consensus 465 ~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~~rIF~In~~g~~~~ 515 (567)
.|+... +. ....+.+||+..+|.-+...||-| +.|||+.++.+
T Consensus 167 ~l~~~~---~~-~~~~~~aY~Ds~~D~pmL~~a~~~----~~vnp~~~l~~ 209 (211)
T PRK11590 167 QLERKI---GT-PLRLYSGYSDSKQDNPLLYFCQHR----WRVTPRGELQQ 209 (211)
T ss_pred HHHHHh---CC-CcceEEEecCCcccHHHHHhCCCC----EEECccHHhhc
Confidence 555433 32 334456999999999999999977 68999877643
No 239
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=86.50 E-value=1.3 Score=44.52 Aligned_cols=50 Identities=14% Similarity=0.199 Sum_probs=35.6
Q ss_pred CcEEEEecCCccccCCccccccccccccccchhHHHHHHHHHHC-CceEEEEccCcc
Q psy12533 83 DKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKEN-GYKLLYLSARAI 138 (567)
Q Consensus 83 ~kiVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~n-GY~ilYLSaRpi 138 (567)
..++++|+||||+.... .-......+++.++.+.+.+. +..+..+|+|++
T Consensus 3 ~~~l~lD~DGTL~~~~~------~p~~~~~~~~~~~~L~~L~~~~~~~v~ivSGR~~ 53 (244)
T TIGR00685 3 KRAFFFDYDGTLSEIVP------DPDAAVVSDRLLTILQKLAARPHNAIWIISGRKF 53 (244)
T ss_pred cEEEEEecCccccCCcC------CCcccCCCHHHHHHHHHHHhCCCCeEEEEECCCh
Confidence 45799999999996310 011224567899999998777 567779999964
No 240
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=85.54 E-value=1.7 Score=39.21 Aligned_cols=97 Identities=18% Similarity=0.232 Sum_probs=56.9
Q ss_pred ccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhccChhHHHHHH
Q psy12533 111 WAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISC 190 (567)
Q Consensus 111 wth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GPlllsp~~l~~al~REvi~k~p~~fKi~~ 190 (567)
...+|+.++.+.++++||++.-+|..+. ...+..|+.+.- ..+++ .++.+ -+....+|+ .++
T Consensus 77 ~~~~~~~~~L~~l~~~~~~~~i~Sn~~~---~~~~~~l~~~~~--~~~f~--------~i~~~--~~~~~~Kp~---~~~ 138 (176)
T PF13419_consen 77 QPYPGVRELLERLKAKGIPLVIVSNGSR---ERIERVLERLGL--DDYFD--------EIISS--DDVGSRKPD---PDA 138 (176)
T ss_dssp EESTTHHHHHHHHHHTTSEEEEEESSEH---HHHHHHHHHTTH--GGGCS--------EEEEG--GGSSSSTTS---HHH
T ss_pred chhhhhhhhhhhcccccceeEEeecCCc---cccccccccccc--ccccc--------ccccc--chhhhhhhH---HHH
Confidence 3456899999999999999999999863 444556655211 12232 22211 123334552 222
Q ss_pred HHHHHHhCCCCCCCEEEecCCcccchhhhhhcCCCC
Q psy12533 191 LRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPL 226 (567)
Q Consensus 191 L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~ 226 (567)
++.+.+.+.-...- ..-+|++..|+.+=+++|+..
T Consensus 139 ~~~~~~~~~~~p~~-~~~vgD~~~d~~~A~~~G~~~ 173 (176)
T PF13419_consen 139 YRRALEKLGIPPEE-ILFVGDSPSDVEAAKEAGIKT 173 (176)
T ss_dssp HHHHHHHHTSSGGG-EEEEESSHHHHHHHHHTTSEE
T ss_pred HHHHHHHcCCCcce-EEEEeCCHHHHHHHHHcCCeE
Confidence 33333222111112 457888899999999999864
No 241
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=85.37 E-value=0.89 Score=45.27 Aligned_cols=37 Identities=16% Similarity=0.309 Sum_probs=22.3
Q ss_pred cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhc
Q psy12533 387 AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSV 426 (567)
Q Consensus 387 ~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~ 426 (567)
-.||.-++|..++++|-.++-+|| ||--..+..++++
T Consensus 74 Idp~fKef~e~ike~di~fiVvSs---Gm~~fI~~lfe~i 110 (220)
T COG4359 74 IDPGFKEFVEWIKEHDIPFIVVSS---GMDPFIYPLFEGI 110 (220)
T ss_pred cCccHHHHHHHHHHcCCCEEEEeC---CCchHHHHHHHhh
Confidence 355666666667777777777776 3444445555544
No 242
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=85.04 E-value=4.7 Score=39.31 Aligned_cols=112 Identities=19% Similarity=0.345 Sum_probs=67.6
Q ss_pred CCeEEEEecCCccccCCcccccccccCc---CC-cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCcc
Q psy12533 357 NDKIVISDIDGTITKSDVLGHVLPIMGK---DW-AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLT 432 (567)
Q Consensus 357 ~~kiVIsDIDGTiTkSD~~G~~~~~~Gk---Dw-~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~ 432 (567)
.-|++|+|||||+|.--. ++.--|. -+ +..|.. .+.|.+.|-++--+|+|.--.. +. ++++ .+
T Consensus 7 ~IkLli~DVDGvLTDG~l---y~~~~Gee~KaFnv~DG~G--ik~l~~~Gi~vAIITGr~s~iv---e~---Ra~~--LG 73 (170)
T COG1778 7 NIKLLILDVDGVLTDGKL---YYDENGEEIKAFNVRDGHG--IKLLLKSGIKVAIITGRDSPIV---EK---RAKD--LG 73 (170)
T ss_pred hceEEEEeccceeecCeE---EEcCCCceeeeeeccCcHH--HHHHHHcCCeEEEEeCCCCHHH---HH---HHHH--cC
Confidence 458899999999996421 1222232 22 555543 3458899999999999965443 22 2222 33
Q ss_pred CCCCceecCCCchhhhhhhhhhccChhHHHHHHHHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCCC
Q psy12533 433 LPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPL 501 (567)
Q Consensus 433 lP~GPvl~spd~l~~al~rEvi~k~p~~fK~~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~ 501 (567)
++. ++ .-+ .=|.+++.+|+.-..-...- .|-.|+-.+|.-+.+++|++-
T Consensus 74 I~~---------~~----qG~------~dK~~a~~~L~~~~~l~~e~-~ayiGDD~~Dlpvm~~vGls~ 122 (170)
T COG1778 74 IKH---------LY----QGI------SDKLAAFEELLKKLNLDPEE-VAYVGDDLVDLPVMEKVGLSV 122 (170)
T ss_pred Cce---------ee----ech------HhHHHHHHHHHHHhCCCHHH-hhhhcCccccHHHHHHcCCcc
Confidence 431 11 111 11677777766532211111 356788899999999999984
No 243
>PLN02151 trehalose-phosphatase
Probab=85.02 E-value=1.5 Score=47.42 Aligned_cols=53 Identities=13% Similarity=0.259 Sum_probs=38.0
Q ss_pred CCeEEEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHCCceEEEEccCcccch
Q psy12533 357 NDKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQS 416 (567)
Q Consensus 357 ~~kiVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa 416 (567)
...++++|+||||+- |.+.-..-..+++..+..+.+. ++..+.-+|||+....
T Consensus 97 ~~~ll~lDyDGTL~P------Iv~~P~~A~~~~~~~~aL~~La-~~~~vaIvSGR~~~~l 149 (354)
T PLN02151 97 KQIVMFLDYDGTLSP------IVDDPDRAFMSKKMRNTVRKLA-KCFPTAIVSGRCREKV 149 (354)
T ss_pred CceEEEEecCccCCC------CCCCcccccCCHHHHHHHHHHh-cCCCEEEEECCCHHHH
Confidence 445688999999982 1111112236788999999999 5679999999987554
No 244
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=85.00 E-value=3.9 Score=42.90 Aligned_cols=127 Identities=17% Similarity=0.227 Sum_probs=74.5
Q ss_pred cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccC--CCCce-----ecCCCchhhhhhhhhhccChh
Q psy12533 387 AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTL--PEGPM-----LLNPTSLLNAFHTEVIEKKPQ 459 (567)
Q Consensus 387 ~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~l--P~GPv-----l~spd~l~~al~rEvi~k~p~ 459 (567)
..||+.+++..++++|+++.-+||=.. ...+..|+. .++ |.-++ .++.++...++.-.+++.
T Consensus 122 l~pG~~efl~~L~~~GIpv~IvS~G~~---~~Ie~vL~~-----lgl~~~~~~IvSN~L~f~~dGvltG~~~P~i~~--- 190 (277)
T TIGR01544 122 LKDGYENFFDKLQQHSIPVFIFSAGIG---NVLEEVLRQ-----AGVYHPNVKVVSNFMDFDEDGVLKGFKGPLIHT--- 190 (277)
T ss_pred cCcCHHHHHHHHHHCCCcEEEEeCCcH---HHHHHHHHH-----cCCCCcCceEEeeeEEECCCCeEeCCCCCcccc---
Confidence 578999999999999999999998443 555666665 333 44444 123444443332222221
Q ss_pred HHHHHH-HHHHHhhCC---CCCCCEEEecCCCcccHHhHHHcCCCC-CCEEEEcCCCcccccccccccccHhhHHhhh
Q psy12533 460 EFKISC-LRDIMALFP---PNTQPFYAGYGNKVNDVWSYQAVGIPL-SRIFTINSRGEVKHEMTQTFQSTYSNMSYLV 532 (567)
Q Consensus 460 ~fK~~~-L~~i~~lf~---~~~~pf~agfGNr~tDv~aY~~vGIp~-~rIF~In~~g~~~~~~~~~~~~sY~~l~~~v 532 (567)
-=|.+. +...+..|. ...+ .-.+|+..+|+.| +-|||. ++|..||=--+-. ....+.|...-|+|
T Consensus 191 ~~K~~~v~~~~~~~~~~~~~~~~--vI~vGDs~~Dl~m--a~g~~~~~~~l~igfln~~~----e~~l~~y~~~~Div 260 (277)
T TIGR01544 191 FNKNHDVALRNTEYFNQLKDRSN--IILLGDSQGDLRM--ADGVANVEHILKIGYLNDRV----DELLEKYMDSYDIV 260 (277)
T ss_pred cccHHHHHHHHHHHhCccCCcce--EEEECcChhhhhH--hcCCCcccceEEEEecccCH----HHHHHHHHHhCCEE
Confidence 113333 323334332 1123 3489999999999 789965 6777776532222 22346666666655
No 245
>cd03016 PRX_1cys Peroxiredoxin (PRX) family, 1-cys PRX subfamily; composed of PRXs containing only one conserved cysteine, which serves as the peroxidatic cysteine. They are homodimeric thiol-specific antioxidant (TSA) proteins that confer a protective role in cells by reducing and detoxifying hydrogen peroxide, peroxynitrite, and organic hydroperoxides. As with all other PRXs, a cysteine sulfenic acid intermediate is formed upon reaction of 1-cys PRX with its substrates. Having no resolving cysteine, the oxidized enzyme is resolved by an external small-molecule or protein reductant such as thioredoxin or glutaredoxin. Similar to typical 2-cys PRX, 1-cys PRX forms a functional dimeric unit with a B-type interface, as well as a decameric structure which is stabilized in the reduced form of the enzyme. Other oligomeric forms, tetramers and hexamers, have also been reported. Mammalian 1-cys PRX is localized cellularly in the cytosol and is expressed at high levels in brain, eye, testes an
Probab=84.57 E-value=2.7 Score=41.35 Aligned_cols=78 Identities=21% Similarity=0.401 Sum_probs=48.3
Q ss_pred EEecCCccccCCccc-c--cccccCcCCc------chhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccC-Cc
Q psy12533 362 ISDIDGTITKSDVLG-H--VLPIMGKDWA------QNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQE-DL 431 (567)
Q Consensus 362 IsDIDGTiTkSD~~G-~--~~~~~GkDw~------h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~-~~ 431 (567)
+-|.+|+++-+|..| . ++-..-.+|+ .+..++++.++++.|.+++-+|.-+. ...++|++.+++. ++
T Consensus 10 ~~~~~g~~~l~d~~g~k~vvlf~~pa~~cp~C~~el~~l~~~~~~f~~~gv~vigvS~D~~---~~~~~~~~~i~~~~~~ 86 (203)
T cd03016 10 ADTTHGPIKFHDYLGDSWGILFSHPADFTPVCTTELGAFAKLAPEFKKRNVKLIGLSVDSV---ESHIKWIEDIEEYTGV 86 (203)
T ss_pred EecCCCcEeHHHHcCCCEEEEEEecCCCCCcCHHHHHHHHHHHHHHHHcCCEEEEEECCCH---HHHHHHHhhHHHhcCC
Confidence 345667777777666 2 1222344553 34677889999999999999997653 3446677766552 13
Q ss_pred cCCCCceecCCC
Q psy12533 432 TLPEGPMLLNPT 443 (567)
Q Consensus 432 ~lP~GPvl~spd 443 (567)
++| -|++..++
T Consensus 87 ~~~-fpil~D~~ 97 (203)
T cd03016 87 EIP-FPIIADPD 97 (203)
T ss_pred CCc-eeEEECch
Confidence 443 35665443
No 246
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=84.52 E-value=3.2 Score=43.49 Aligned_cols=129 Identities=18% Similarity=0.267 Sum_probs=72.8
Q ss_pred ccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccC--CCCcee-----cCCCchhhhhhhhhhccCh
Q psy12533 111 WAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTL--PEGPML-----LNPTSLLNAFHTEVIEKKP 183 (567)
Q Consensus 111 wth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~L--P~GPll-----lsp~~l~~al~REvi~k~p 183 (567)
-..+|+.+|+..++++|.++.-+|| |.....+..|+. .++ |..+++ .+.++...++.-.++..
T Consensus 121 ~l~pG~~efl~~L~~~GIpv~IvS~---G~~~~Ie~vL~~-----lgl~~~~~~IvSN~L~f~~dGvltG~~~P~i~~-- 190 (277)
T TIGR01544 121 MLKDGYENFFDKLQQHSIPVFIFSA---GIGNVLEEVLRQ-----AGVYHPNVKVVSNFMDFDEDGVLKGFKGPLIHT-- 190 (277)
T ss_pred ccCcCHHHHHHHHHHCCCcEEEEeC---CcHHHHHHHHHH-----cCCCCcCceEEeeeEEECCCCeEeCCCCCcccc--
Confidence 3467999999999999999999999 555666666765 233 333331 22233322221111111
Q ss_pred hHHHHHH-HHHHHHhCC--CCCCCEEEecCCcccchhhhhhcCCCC-CCEEEEcCCCceeccccccccccHHhHHhhh
Q psy12533 184 QEFKISC-LRDIMALFP--PNTQPFYAGYGNKVNDVWSYQAVGIPL-SRIFTINSRGEVKHEMTQTFQSTYSNMSYLV 257 (567)
Q Consensus 184 ~~fKi~~-L~~i~~lf~--~~~~pf~agfGNr~tDv~aY~~vGIp~-~rIF~In~~g~~~~~~~~~~~~sY~~l~~~v 257 (567)
.=|.+. +...+..|. ....- ...+|+..+|+.| +-|||. ++|..|+=--+- .....+.|...-|+|
T Consensus 191 -~~K~~~v~~~~~~~~~~~~~~~~-vI~vGDs~~Dl~m--a~g~~~~~~~l~igfln~~----~e~~l~~y~~~~Div 260 (277)
T TIGR01544 191 -FNKNHDVALRNTEYFNQLKDRSN-IILLGDSQGDLRM--ADGVANVEHILKIGYLNDR----VDELLEKYMDSYDIV 260 (277)
T ss_pred -cccHHHHHHHHHHHhCccCCcce-EEEECcChhhhhH--hcCCCcccceEEEEecccC----HHHHHHHHHHhCCEE
Confidence 014443 223444432 11222 4589999999998 789965 677666542111 122346676666655
No 247
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=84.48 E-value=6.1 Score=44.64 Aligned_cols=87 Identities=18% Similarity=0.238 Sum_probs=63.8
Q ss_pred CcCCcchhHHHHHHHHHHCCc-eEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhccChhHH
Q psy12533 383 GKDWAQNGVTRLFTKIKENGY-KLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEF 461 (567)
Q Consensus 383 GkDw~h~Gva~l~~~i~~nGY-~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GPvl~spd~l~~al~rEvi~k~p~~f 461 (567)
-+|...+|+.++.+.++++|+ ++.-+|+.+...+ +..++. .++++ .|. ++ .| .-
T Consensus 359 ~~d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a---~~i~~~-----lgi~~---------~f~----~~---~p-~~ 413 (536)
T TIGR01512 359 LSDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVA---ERVARE-----LGIDE---------VHA----EL---LP-ED 413 (536)
T ss_pred EeccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHH---HHHHHH-----cCChh---------hhh----cc---Cc-HH
Confidence 367889999999999999999 9999999866444 666666 44531 221 11 12 23
Q ss_pred HHHHHHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCC
Q psy12533 462 KISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGI 499 (567)
Q Consensus 462 K~~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGI 499 (567)
|.+.++.++. ... -.+.+|+..+|+.|-+++|+
T Consensus 414 K~~~i~~l~~----~~~-~v~~vGDg~nD~~al~~A~v 446 (536)
T TIGR01512 414 KLEIVKELRE----KYG-PVAMVGDGINDAPALAAADV 446 (536)
T ss_pred HHHHHHHHHh----cCC-EEEEEeCCHHHHHHHHhCCE
Confidence 6778888776 233 36789999999999999996
No 248
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=84.46 E-value=4.8 Score=39.79 Aligned_cols=122 Identities=14% Similarity=0.190 Sum_probs=75.2
Q ss_pred cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecC-----C-CchhhhhhhhhhccChhH
Q psy12533 112 AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLN-----P-TSLLNAFHTEVIEKKPQE 185 (567)
Q Consensus 112 th~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GPllls-----p-~~l~~al~REvi~k~p~~ 185 (567)
..+|+.++...++++| ++.-+|+-.. ..++..++. .+++. ++.+ . +.+. .+.+.. -.
T Consensus 69 l~pga~ell~~lk~~~-~~~IVS~~~~---~~~~~il~~-----lgi~~--~~an~l~~~~~g~~t----G~~~~~--~~ 131 (203)
T TIGR02137 69 PLEGAVEFVDWLRERF-QVVILSDTFY---EFSQPLMRQ-----LGFPT--LLCHKLEIDDSDRVV----GYQLRQ--KD 131 (203)
T ss_pred CCccHHHHHHHHHhCC-eEEEEeCChH---HHHHHHHHH-----cCCch--hhceeeEEecCCeeE----CeeecC--cc
Confidence 4679999999999986 9999999544 455556655 44431 2211 1 1111 111111 12
Q ss_pred HHHHHHHHHHHhCCCCCCCEEEecCCcccchhhhhhcCCCCCCEEEEcCCCceeccccc-cccccHHhHHhhhhh
Q psy12533 186 FKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLSRIFTINSRGEVKHEMTQ-TFQSTYSNMSYLVDQ 259 (567)
Q Consensus 186 fKi~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~~rIF~In~~g~~~~~~~~-~~~~sY~~l~~~vd~ 259 (567)
-|.+.++.++.. ... ..++|+..+|+.+.+.+|++. .++++-.+.....+ ...++|..|-+..+.
T Consensus 132 ~K~~~l~~l~~~----~~~-~v~vGDs~nDl~ml~~Ag~~i----a~~ak~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (203)
T TIGR02137 132 PKRQSVIAFKSL----YYR-VIAAGDSYNDTTMLSEAHAGI----LFHAPENVIREFPQFPAVHTYEDLKREFLK 197 (203)
T ss_pred hHHHHHHHHHhh----CCC-EEEEeCCHHHHHHHHhCCCCE----EecCCHHHHHhCCCCCcccCHHHHHHHHHH
Confidence 478888877654 223 668999999999999999885 34555334332222 345778877776654
No 249
>cd03018 PRX_AhpE_like Peroxiredoxin (PRX) family, AhpE-like subfamily; composed of proteins similar to Mycobacterium tuberculosis AhpE. AhpE is described as a 1-cys PRX because of the absence of a resolving cysteine. The structure and sequence of AhpE, however, show greater similarity to 2-cys PRXs than 1-cys PRXs. PRXs are thiol-specific antioxidant (TSA) proteins that confer a protective role in cells through their peroxidase activity in which hydrogen peroxide, peroxynitrate, and organic hydroperoxides are reduced and detoxified using reducing equivalents derived from either thioredoxin, glutathione, trypanothione and AhpF. The first step of catalysis is the nucleophilic attack by the peroxidatic cysteine on the peroxide leading to the formation of a cysteine sulfenic acid intermediate. The absence of a resolving cysteine suggests that functional AhpE is regenerated by an external reductant. The solution behavior and crystal structure of AhpE show that it forms dimers and octamers.
Probab=84.35 E-value=5 Score=36.40 Aligned_cols=33 Identities=12% Similarity=0.195 Sum_probs=25.4
Q ss_pred hHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHh
Q psy12533 115 GVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQS 150 (567)
Q Consensus 115 GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~ 150 (567)
..++++.++.++|.+++-+|.-+ .+..++|++.
T Consensus 50 ~l~~~~~~~~~~~v~vi~vs~d~---~~~~~~~~~~ 82 (149)
T cd03018 50 ALRDSLELFEAAGAEVLGISVDS---PFSLRAWAEE 82 (149)
T ss_pred HHHHHHHHHHhCCCEEEEecCCC---HHHHHHHHHh
Confidence 56688888888999999998754 3456778766
No 250
>cd03017 PRX_BCP Peroxiredoxin (PRX) family, Bacterioferritin comigratory protein (BCP) subfamily; composed of thioredoxin-dependent thiol peroxidases, widely expressed in pathogenic bacteria, that protect cells against toxicity from reactive oxygen species by reducing and detoxifying hydroperoxides. The protein was named BCP based on its electrophoretic mobility before its function was known. BCP shows substrate selectivity toward fatty acid hydroperoxides rather than hydrogen peroxide or alkyl hydroperoxides. BCP contains the peroxidatic cysteine but appears not to possess a resolving cysteine (some sequences, not all, contain a second cysteine but its role is still unknown). Unlike other PRXs, BCP exists as a monomer. The plant homolog of BCP is PRX Q, which is expressed only in leaves and is cellularly localized in the chloroplasts and the guard cells of stomata. Also included in this subfamily is the fungal nuclear protein, Dot5p (for disrupter of telomere silencing protein 5), w
Probab=84.30 E-value=7.9 Score=34.61 Aligned_cols=61 Identities=20% Similarity=0.292 Sum_probs=38.6
Q ss_pred EEecCCc-cccCCccccc-ccccc-cccc------chhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHh
Q psy12533 87 ISDIDGT-ITKSDVLGHV-LPIMG-KDWA------QNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQS 150 (567)
Q Consensus 87 ISDIDGT-ITkSD~lG~i-l~~lG-kDwt------h~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~ 150 (567)
+-|++|. ++-++..|.. +-.+. ..|. -+...+++.++++.|..|+-+|..+ .+..++|++.
T Consensus 8 l~~~~g~~~~l~~~~gk~~ll~f~~~~~cp~C~~~~~~l~~~~~~~~~~~~~vv~is~d~---~~~~~~~~~~ 77 (140)
T cd03017 8 LPDQDGETVSLSDLRGKPVVLYFYPKDDTPGCTKEACDFRDLYEEFKALGAVVIGVSPDS---VESHAKFAEK 77 (140)
T ss_pred ccCCCCCEEeHHHhCCCcEEEEEeCCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEcCCC---HHHHHHHHHH
Confidence 3466663 5666666653 11122 2332 2356678888888999999999753 4556778776
No 251
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=84.04 E-value=1.9 Score=44.16 Aligned_cols=45 Identities=18% Similarity=0.467 Sum_probs=35.4
Q ss_pred CCcEEEEecCCccccCCccccccccccccccchhHHHHHHHHHHCCceEEEEccCcc
Q psy12533 82 NDKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAI 138 (567)
Q Consensus 82 ~~kiVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi 138 (567)
..++|-.|||||+..- |.+|- -++..+..+++.||+++.|||...
T Consensus 6 ~~~lIFtDlD~TLl~~----------~ye~~--pA~pv~~el~d~G~~Vi~~SSKT~ 50 (274)
T COG3769 6 MPLLIFTDLDGTLLPH----------SYEWQ--PAAPVLLELKDAGVPVILCSSKTR 50 (274)
T ss_pred cceEEEEcccCcccCC----------CCCCC--ccchHHHHHHHcCCeEEEeccchH
Confidence 3467888999999862 34553 367889999999999999999654
No 252
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=83.94 E-value=2.6 Score=43.20 Aligned_cols=47 Identities=17% Similarity=0.463 Sum_probs=36.5
Q ss_pred CCeEEEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHCCceEEEEccCcccc
Q psy12533 357 NDKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQ 415 (567)
Q Consensus 357 ~~kiVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~q 415 (567)
...+|-.|||||+..- |.+|- -++.++..+++.||.||.||+...--
T Consensus 6 ~~~lIFtDlD~TLl~~----------~ye~~--pA~pv~~el~d~G~~Vi~~SSKT~aE 52 (274)
T COG3769 6 MPLLIFTDLDGTLLPH----------SYEWQ--PAAPVLLELKDAGVPVILCSSKTRAE 52 (274)
T ss_pred cceEEEEcccCcccCC----------CCCCC--ccchHHHHHHHcCCeEEEeccchHHH
Confidence 4567888999999752 45653 25678999999999999999976543
No 253
>PLN02151 trehalose-phosphatase
Probab=83.83 E-value=1.7 Score=46.97 Aligned_cols=58 Identities=14% Similarity=0.216 Sum_probs=41.2
Q ss_pred EEecCCCcEEEEecCCccccCCccccccccccccccchhHHHHHHHHHHCCceEEEEccCcccch
Q psy12533 77 FKWRWNDKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQS 141 (567)
Q Consensus 77 ylw~~~~kiVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a 141 (567)
.+......++++|+||||+. |.+.-.....+++..+..+.+. ++..+.-+|+|+....
T Consensus 92 ~~~~~~~~ll~lDyDGTL~P------Iv~~P~~A~~~~~~~~aL~~La-~~~~vaIvSGR~~~~l 149 (354)
T PLN02151 92 HKSEGKQIVMFLDYDGTLSP------IVDDPDRAFMSKKMRNTVRKLA-KCFPTAIVSGRCREKV 149 (354)
T ss_pred HhhcCCceEEEEecCccCCC------CCCCcccccCCHHHHHHHHHHh-cCCCEEEEECCCHHHH
Confidence 33444556899999999992 2222223356778999999999 5679999999987544
No 254
>cd03016 PRX_1cys Peroxiredoxin (PRX) family, 1-cys PRX subfamily; composed of PRXs containing only one conserved cysteine, which serves as the peroxidatic cysteine. They are homodimeric thiol-specific antioxidant (TSA) proteins that confer a protective role in cells by reducing and detoxifying hydrogen peroxide, peroxynitrite, and organic hydroperoxides. As with all other PRXs, a cysteine sulfenic acid intermediate is formed upon reaction of 1-cys PRX with its substrates. Having no resolving cysteine, the oxidized enzyme is resolved by an external small-molecule or protein reductant such as thioredoxin or glutaredoxin. Similar to typical 2-cys PRX, 1-cys PRX forms a functional dimeric unit with a B-type interface, as well as a decameric structure which is stabilized in the reduced form of the enzyme. Other oligomeric forms, tetramers and hexamers, have also been reported. Mammalian 1-cys PRX is localized cellularly in the cytosol and is expressed at high levels in brain, eye, testes an
Probab=83.76 E-value=4.6 Score=39.74 Aligned_cols=133 Identities=17% Similarity=0.308 Sum_probs=77.0
Q ss_pred EEEecCCccccCCccc-c--ccccccccccch------hHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCC-
Q psy12533 86 VISDIDGTITKSDVLG-H--VLPIMGKDWAQN------GVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQED- 155 (567)
Q Consensus 86 VISDIDGTITkSD~lG-~--il~~lGkDwth~------GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~- 155 (567)
.+-|.+|+++-+|..| . ++-..-.+|+-. ..++++.++++.|.+++-+|.-+. ...++|++.+++..
T Consensus 9 ~~~~~~g~~~l~d~~g~k~vvlf~~pa~~cp~C~~el~~l~~~~~~f~~~gv~vigvS~D~~---~~~~~~~~~i~~~~~ 85 (203)
T cd03016 9 EADTTHGPIKFHDYLGDSWGILFSHPADFTPVCTTELGAFAKLAPEFKKRNVKLIGLSVDSV---ESHIKWIEDIEEYTG 85 (203)
T ss_pred EEecCCCcEeHHHHcCCCEEEEEEecCCCCCcCHHHHHHHHHHHHHHHHcCCEEEEEECCCH---HHHHHHHhhHHHhcC
Confidence 3446677777777777 3 232344555544 677889999999999999997653 44466777665521
Q ss_pred ccCCCCceecCCCchhhhhhhhhhccChhHHHHHHHHHHHHhCCCCCCCEEEecCCcccchhhhhhcCCCCCCEEEEcCC
Q psy12533 156 LTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLSRIFTINSR 235 (567)
Q Consensus 156 ~~LP~GPlllsp~~l~~al~REvi~k~p~~fKi~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~~rIF~In~~ 235 (567)
.++| -|++..+++.+ ...|. -...+ ...+.+.--+|+||++
T Consensus 86 ~~~~-fpil~D~~~~i-----------------------a~~yg-----------~~~~~----~~~~~~~r~~fiID~~ 126 (203)
T cd03016 86 VEIP-FPIIADPDREV-----------------------AKLLG-----------MIDPD----AGSTLTVRAVFIIDPD 126 (203)
T ss_pred CCCc-eeEEECchHHH-----------------------HHHcC-----------Ccccc----CCCCceeeEEEEECCC
Confidence 3444 35665554222 11111 00000 0112233458999999
Q ss_pred Cceecccccc--ccccHHhHHhhhhhc
Q psy12533 236 GEVKHEMTQT--FQSTYSNMSYLVDQM 260 (567)
Q Consensus 236 g~~~~~~~~~--~~~sY~~l~~~vd~~ 260 (567)
|+|+...... .-.+...|-+.++.+
T Consensus 127 G~I~~~~~~~~~~gr~~~ell~~l~~l 153 (203)
T cd03016 127 KKIRLILYYPATTGRNFDEILRVVDAL 153 (203)
T ss_pred CeEEEEEecCCCCCCCHHHHHHHHHHH
Confidence 9998654321 123567777777664
No 255
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=83.75 E-value=3.7 Score=39.55 Aligned_cols=94 Identities=20% Similarity=0.281 Sum_probs=55.8
Q ss_pred cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCC--CceecCCCchhhhhhhhhhccChhHHHHH
Q psy12533 112 AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPE--GPMLLNPTSLLNAFHTEVIEKKPQEFKIS 189 (567)
Q Consensus 112 th~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~--GPlllsp~~l~~al~REvi~k~p~~fKi~ 189 (567)
..+|+.++.+.++++||++.-+|+..... ++..|+. .++.. --++.+.+ +...+| +-+
T Consensus 76 ~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~---~~~~l~~-----~~l~~~f~~i~~~~~---------~~~~KP---~~~ 135 (205)
T TIGR01454 76 VFPGVPELLAELRADGVGTAIATGKSGPR---ARSLLEA-----LGLLPLFDHVIGSDE---------VPRPKP---APD 135 (205)
T ss_pred cCCCHHHHHHHHHHCCCeEEEEeCCchHH---HHHHHHH-----cCChhheeeEEecCc---------CCCCCC---ChH
Confidence 35699999999999999999999975444 3445544 22211 01222221 122344 223
Q ss_pred HHHHHHHhCCCCCCCEEEecCCcccchhhhhhcCCCC
Q psy12533 190 CLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPL 226 (567)
Q Consensus 190 ~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~ 226 (567)
++..+...+.-...- ..-+|++.+|+.+=+++|++.
T Consensus 136 ~~~~~~~~~~~~~~~-~l~igD~~~Di~aA~~~Gi~~ 171 (205)
T TIGR01454 136 IVREALRLLDVPPED-AVMVGDAVTDLASARAAGTAT 171 (205)
T ss_pred HHHHHHHHcCCChhh-eEEEcCCHHHHHHHHHcCCeE
Confidence 333333333211111 456889999999999999984
No 256
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=83.33 E-value=3.8 Score=42.04 Aligned_cols=93 Identities=12% Similarity=0.191 Sum_probs=57.9
Q ss_pred chhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCC--CceecCCCchhhhhhhhhhccChhHHHHHH
Q psy12533 388 QNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPE--GPMLLNPTSLLNAFHTEVIEKKPQEFKISC 465 (567)
Q Consensus 388 h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~--GPvl~spd~l~~al~rEvi~k~p~~fK~~~ 465 (567)
.+|+.++...++++||++.-+|+.+...+ +..|+. ++|.. --++.+.+ .. ...++|+.|..++
T Consensus 111 ~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~---~~~l~~-----~gl~~~Fd~ii~~~d-~~------~~KP~Pe~~~~a~ 175 (260)
T PLN03243 111 RPGSREFVQALKKHEIPIAVASTRPRRYL---ERAIEA-----VGMEGFFSVVLAAED-VY------RGKPDPEMFMYAA 175 (260)
T ss_pred CCCHHHHHHHHHHCCCEEEEEeCcCHHHH---HHHHHH-----cCCHhhCcEEEeccc-CC------CCCCCHHHHHHHH
Confidence 47899999999999999999999876444 444544 23221 11222221 10 1244567776554
Q ss_pred HHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCCC
Q psy12533 466 LRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPL 501 (567)
Q Consensus 466 L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~ 501 (567)
+.+ .+-| .. ...+|++.+|+.|=+++|+..
T Consensus 176 -~~l-~~~p--~~--~l~IgDs~~Di~aA~~aG~~~ 205 (260)
T PLN03243 176 -ERL-GFIP--ER--CIVFGNSNSSVEAAHDGCMKC 205 (260)
T ss_pred -HHh-CCCh--HH--eEEEcCCHHHHHHHHHcCCEE
Confidence 222 1111 11 346999999999999999963
No 257
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=83.29 E-value=4.8 Score=40.13 Aligned_cols=123 Identities=20% Similarity=0.339 Sum_probs=77.9
Q ss_pred cEEEEecCCccccCCc---ccc---------------ccccccccccch-----hHHHHHHHHHHCCceEEEEccCcccc
Q psy12533 84 KIVISDIDGTITKSDV---LGH---------------VLPIMGKDWAQN-----GVTRLFTKIKENGYKLLYLSARAIGQ 140 (567)
Q Consensus 84 kiVISDIDGTITkSD~---lG~---------------il~~lGkDwth~-----GVa~Ly~~i~~nGY~ilYLSaRpi~~ 140 (567)
-.|-||||.|+.=|.- .|. ++..+.+-|-.- -+.+|-.+=++.|=+|.|+|+|.-+-
T Consensus 64 i~VsFDIDDTvLFsSp~F~~Gk~~~sPgs~DyLknq~FW~~vn~g~D~~SIPKevA~qLI~MHq~RGD~i~FvTGRt~gk 143 (237)
T COG3700 64 IAVSFDIDDTVLFSSPGFWRGKKYFSPGSEDYLKNQVFWEKVNNGWDEFSIPKEVARQLIDMHQRRGDAIYFVTGRTPGK 143 (237)
T ss_pred eeEeeccCCeeEecccccccCccccCCChHHhhcCHHHHHHHhcCCccccchHHHHHHHHHHHHhcCCeEEEEecCCCCc
Confidence 3699999999987654 332 122333333322 23356666678899999999998887
Q ss_pred hHHHHHHHHhcccCCccC-CCCceecCCCchhhhhhhhhhccChhH-HHHHHHHHHHHhCCCCCCCEEEecCCcccchhh
Q psy12533 141 SRVTREYLQSVKQEDLTL-PEGPMLLNPTSLLNAFHTEVIEKKPQE-FKISCLRDIMALFPPNTQPFYAGYGNKVNDVWS 218 (567)
Q Consensus 141 a~~Tr~~L~~~~q~~~~L-P~GPlllsp~~l~~al~REvi~k~p~~-fKi~~L~~i~~lf~~~~~pf~agfGNr~tDv~a 218 (567)
.+.+-.-|.. .+.+ -+-||....| ..+|.. -|..+|.+ . + .--=||+.++|+.|
T Consensus 144 ~d~vsk~Lak----~F~i~~m~pv~f~Gd-----------k~k~~qy~Kt~~i~~---~-----~-~~IhYGDSD~Di~A 199 (237)
T COG3700 144 TDTVSKTLAK----NFHITNMNPVIFAGD-----------KPKPGQYTKTQWIQD---K-----N-IRIHYGDSDNDITA 199 (237)
T ss_pred ccccchhHHh----hcccCCCcceeeccC-----------CCCcccccccHHHHh---c-----C-ceEEecCCchhhhH
Confidence 7777666653 1222 1234554433 113444 46666544 1 1 13358999999999
Q ss_pred hhhcCCCCCCEE
Q psy12533 219 YQAVGIPLSRIF 230 (567)
Q Consensus 219 Y~~vGIp~~rIF 230 (567)
=+++|+-.=||.
T Consensus 200 AkeaG~RgIRil 211 (237)
T COG3700 200 AKEAGARGIRIL 211 (237)
T ss_pred HHhcCccceeEE
Confidence 999999887774
No 258
>PRK10671 copA copper exporting ATPase; Provisional
Probab=83.23 E-value=5.4 Score=47.47 Aligned_cols=103 Identities=16% Similarity=0.269 Sum_probs=71.4
Q ss_pred eEEEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCce
Q psy12533 359 KIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPM 438 (567)
Q Consensus 359 kiVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GPv 438 (567)
.+|..-+||++. |.+ .-.|..++|+.++...+++.||++.-+|+...-.+ +..++. .++++
T Consensus 631 ~~v~va~~~~~~-----g~~---~l~d~~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a---~~ia~~-----lgi~~--- 691 (834)
T PRK10671 631 TPVLLAVDGKAA-----ALL---AIRDPLRSDSVAALQRLHKAGYRLVMLTGDNPTTA---NAIAKE-----AGIDE--- 691 (834)
T ss_pred eEEEEEECCEEE-----EEE---EccCcchhhHHHHHHHHHHCCCeEEEEcCCCHHHH---HHHHHH-----cCCCE---
Confidence 445555666532 222 12688899999999999999999999999776554 444444 44542
Q ss_pred ecCCCchhhhhhhhhhccChhHHHHHHHHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCC
Q psy12533 439 LLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGI 499 (567)
Q Consensus 439 l~spd~l~~al~rEvi~k~p~~fK~~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGI 499 (567)
.+. ++ .|+ -|.++++.++. ... -.+.+|+..+|+.|-+++|+
T Consensus 692 ------~~~----~~---~p~-~K~~~i~~l~~----~~~-~v~~vGDg~nD~~al~~Agv 733 (834)
T PRK10671 692 ------VIA----GV---LPD-GKAEAIKRLQS----QGR-QVAMVGDGINDAPALAQADV 733 (834)
T ss_pred ------EEe----CC---CHH-HHHHHHHHHhh----cCC-EEEEEeCCHHHHHHHHhCCe
Confidence 111 11 244 38889998876 222 36899999999999999988
No 259
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=82.93 E-value=2.7 Score=40.02 Aligned_cols=62 Identities=18% Similarity=0.337 Sum_probs=43.1
Q ss_pred eEEEEecCCccccCCcccc-----c-ccc-cC-c--C---CcchhHHHHHHHHHHCCceEEEEccCcccchHHHHH
Q psy12533 359 KIVISDIDGTITKSDVLGH-----V-LPI-MG-K--D---WAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTRE 421 (567)
Q Consensus 359 kiVIsDIDGTiTkSD~~G~-----~-~~~-~G-k--D---w~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~ 421 (567)
+.+|.|+|+|+-.|...-. + ++. .+ + . +.+||+.++...++++ |.|+-.|+-+...|+..-+
T Consensus 2 ~~lvlDLDeTLi~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~RPgl~eFL~~l~~~-yei~I~Ts~~~~yA~~il~ 76 (162)
T TIGR02251 2 KTLVLDLDETLVHSTFKMPKVDADFKVPVLIDGKIIPVYVFKRPHVDEFLERVSKW-YELVIFTASLEEYADPVLD 76 (162)
T ss_pred cEEEEcCCCCcCCCCCCCCCCCCceEEEEEecCcEEEEEEEECCCHHHHHHHHHhc-CEEEEEcCCcHHHHHHHHH
Confidence 5799999999997743210 0 111 11 0 1 4799999999999998 9999888877666644333
No 260
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=82.74 E-value=2.3 Score=39.74 Aligned_cols=93 Identities=12% Similarity=0.200 Sum_probs=54.7
Q ss_pred cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhccChhHHHHHHH
Q psy12533 387 AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCL 466 (567)
Q Consensus 387 ~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GPvl~spd~l~~al~rEvi~k~p~~fK~~~L 466 (567)
..||+.++.+.++++||++.-+|++ ...+..|+...- ..+.+ -++.+.+ ...-.++|+.|... +
T Consensus 89 ~~~g~~~~l~~l~~~g~~i~i~S~~-----~~~~~~l~~~~l--~~~f~-~v~~~~~-------~~~~kp~~~~~~~~-~ 152 (185)
T TIGR02009 89 VLPGIENFLKRLKKKGIAVGLGSSS-----KNADRILAKLGL--TDYFD-AIVDADE-------VKEGKPHPETFLLA-A 152 (185)
T ss_pred CCcCHHHHHHHHHHcCCeEEEEeCc-----hhHHHHHHHcCh--HHHCC-Eeeehhh-------CCCCCCChHHHHHH-H
Confidence 5789999999999999999999987 234555655111 11111 1221111 11123345555432 3
Q ss_pred HHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCC
Q psy12533 467 RDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIP 500 (567)
Q Consensus 467 ~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp 500 (567)
+.+. + ++ ... ..+|++..|+.+=+++|++
T Consensus 153 ~~~~-~-~~-~~~--v~IgD~~~di~aA~~~G~~ 181 (185)
T TIGR02009 153 ELLG-V-SP-NEC--VVFEDALAGVQAARAAGMF 181 (185)
T ss_pred HHcC-C-CH-HHe--EEEeCcHhhHHHHHHCCCe
Confidence 3221 1 11 222 3579999999999999996
No 261
>TIGR02540 gpx7 putative glutathione peroxidase Gpx7. This model represents one of several families of known and probable glutathione peroxidases. This family is restricted to animals and designated GPX7.
Probab=82.28 E-value=10 Score=35.13 Aligned_cols=62 Identities=15% Similarity=0.248 Sum_probs=39.3
Q ss_pred EecCC-ccccCCccccc-cccccccccch------hHHHHHHHHHHCCceEEEEccCcc-----cchHHHHHHHH
Q psy12533 88 SDIDG-TITKSDVLGHV-LPIMGKDWAQN------GVTRLFTKIKENGYKLLYLSARAI-----GQSRVTREYLQ 149 (567)
Q Consensus 88 SDIDG-TITkSD~lG~i-l~~lGkDwth~------GVa~Ly~~i~~nGY~ilYLSaRpi-----~~a~~Tr~~L~ 149 (567)
-|.|| |++.|+..|.. +-..-..|..+ ...+++++++++|..|+-+++... .-.+..++|++
T Consensus 8 ~~~~G~~~~l~~~~Gk~vvv~~~as~C~~c~~~~~~l~~l~~~~~~~~~~v~~i~~~~~~~~~~d~~~~~~~f~~ 82 (153)
T TIGR02540 8 KDARGRTVSLEKYRGKVSLVVNVASECGFTDQNYRALQELHRELGPSHFNVLAFPCNQFGESEPDSSKEIESFAR 82 (153)
T ss_pred ECCCCCEecHHHhCCCEEEEEEeCCCCCchhhhHHHHHHHHHHHhhCCeEEEEEeccccccCCCCCHHHHHHHHH
Confidence 46777 77778888874 21222334333 455889999999999999986422 22345566664
No 262
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=81.58 E-value=4.3 Score=38.46 Aligned_cols=90 Identities=23% Similarity=0.332 Sum_probs=60.2
Q ss_pred CcCCcchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhccChhHHH
Q psy12533 383 GKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFK 462 (567)
Q Consensus 383 GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GPvl~spd~l~~al~rEvi~k~p~~fK 462 (567)
-.|..++|+.++.+.+++.|+++.-+|+....-+ +...+. .++++.- .++ ++. .+| .-|
T Consensus 124 ~~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a---~~~~~~-----lgi~~~~-------v~a----~~~-~kP-~~k 182 (215)
T PF00702_consen 124 LRDPLRPGAKEALQELKEAGIKVAILTGDNESTA---SAIAKQ-----LGIFDSI-------VFA----RVI-GKP-EPK 182 (215)
T ss_dssp EEEEBHTTHHHHHHHHHHTTEEEEEEESSEHHHH---HHHHHH-----TTSCSEE-------EEE----SHE-TTT-HHH
T ss_pred ecCcchhhhhhhhhhhhccCcceeeeeccccccc---cccccc-----ccccccc-------ccc----ccc-ccc-cch
Confidence 3677899999999999999999999998776655 444444 4553211 111 010 345 224
Q ss_pred --HHHHHHHHhhCCCCCCCEEEecCCCcccHHhHHHcC
Q psy12533 463 --ISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVG 498 (567)
Q Consensus 463 --~~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vG 498 (567)
..+++.++. .... ++.+|+..||+.|=+++|
T Consensus 183 ~~~~~i~~l~~----~~~~-v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 183 IFLRIIKELQV----KPGE-VAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp HHHHHHHHHTC----TGGG-EEEEESSGGHHHHHHHSS
T ss_pred hHHHHHHHHhc----CCCE-EEEEccCHHHHHHHHhCc
Confidence 555666552 1233 689999999999999886
No 263
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=81.56 E-value=6.4 Score=44.84 Aligned_cols=103 Identities=15% Similarity=0.237 Sum_probs=70.4
Q ss_pred cEEEEecCCccccCCccccccccccccccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCce
Q psy12533 84 KIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPM 163 (567)
Q Consensus 84 kiVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GPl 163 (567)
.+|..+.||++..- + .=+|-.++|+.++.+.++++|+++.-+|+.+...+ +..++. .+++ +
T Consensus 386 ~~~~~~~~~~~~g~-----~---~~~d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a---~~ia~~-----lgi~---~ 446 (562)
T TIGR01511 386 TSVLVAVNGELAGV-----F---ALEDQLRPEAKEVIQALKRRGIEPVMLTGDNRKTA---KAVAKE-----LGIN---V 446 (562)
T ss_pred EEEEEEECCEEEEE-----E---EecccccHHHHHHHHHHHHcCCeEEEEcCCCHHHH---HHHHHH-----cCCc---E
Confidence 45666777765422 1 01567899999999999999999999999876544 445554 4443 1
Q ss_pred ecCCCchhhhhhhhhhccChhHHHHHHHHHHHHhCCCCCCCEEEecCCcccchhhhhhcCCC
Q psy12533 164 LLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIP 225 (567)
Q Consensus 164 llsp~~l~~al~REvi~k~p~~fKi~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp 225 (567)
+ . ++ .| +=|.+.++.++.. .. -++-+|+..+|+.|-+++||.
T Consensus 447 ~-------~----~~---~p-~~K~~~v~~l~~~----~~-~v~~VGDg~nD~~al~~A~vg 488 (562)
T TIGR01511 447 R-------A----EV---LP-DDKAALIKELQEK----GR-VVAMVGDGINDAPALAQADVG 488 (562)
T ss_pred E-------c----cC---Ch-HHHHHHHHHHHHc----CC-EEEEEeCCCccHHHHhhCCEE
Confidence 1 1 11 23 2367777777662 22 377899999999999999974
No 264
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=81.51 E-value=6.5 Score=44.54 Aligned_cols=103 Identities=19% Similarity=0.292 Sum_probs=70.5
Q ss_pred cEEEEecCCccccCCccccccccccccccchhHHHHHHHHHHCC-ceEEEEccCcccchHHHHHHHHhcccCCccCCCCc
Q psy12533 84 KIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENG-YKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGP 162 (567)
Q Consensus 84 kiVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nG-Y~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GP 162 (567)
.++....||+... .+ .-+|-.++|+.++.+.++++| |++.-+|+.+...+ +..++. .++.+
T Consensus 365 ~~~~v~~~~~~~g-----~i---~~~d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a---~~i~~~-----lgi~~-- 426 (556)
T TIGR01525 365 TVVFVAVDGELLG-----VI---ALRDQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAA---EAVAAE-----LGIDE-- 426 (556)
T ss_pred EEEEEEECCEEEE-----EE---EecccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHH---HHHHHH-----hCCCe--
Confidence 3455666664332 22 236788999999999999999 99999999877554 555555 44421
Q ss_pred eecCCCchhhhhhhhhhccChhHHHHHHHHHHHHhCCCCCCCEEEecCCcccchhhhhhcCC
Q psy12533 163 MLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGI 224 (567)
Q Consensus 163 lllsp~~l~~al~REvi~k~p~~fKi~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGI 224 (567)
.|. ++ .| +-|.+.++.++.. ..-++.+|++.+|+.|-+++||
T Consensus 427 -------~f~----~~---~p-~~K~~~v~~l~~~-----~~~v~~vGDg~nD~~al~~A~v 468 (556)
T TIGR01525 427 -------VHA----EL---LP-EDKLAIVKELQEE-----GGVVAMVGDGINDAPALAAADV 468 (556)
T ss_pred -------eec----cC---CH-HHHHHHHHHHHHc-----CCEEEEEECChhHHHHHhhCCE
Confidence 121 11 22 2467778887763 2247889999999999999995
No 265
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=81.46 E-value=3.4 Score=39.29 Aligned_cols=64 Identities=17% Similarity=0.318 Sum_probs=44.2
Q ss_pred cEEEEecCCccccCCccc-c----c-cc-cccc------cccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHH
Q psy12533 84 KIVISDIDGTITKSDVLG-H----V-LP-IMGK------DWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYL 148 (567)
Q Consensus 84 kiVISDIDGTITkSD~lG-~----i-l~-~lGk------Dwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L 148 (567)
+.+|.|+|+|+-.|...- . + .+ ..+. =+-+||+.++...++++ |.|+-.|+-+-..|+..-+.|
T Consensus 2 ~~lvlDLDeTLi~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~RPgl~eFL~~l~~~-yei~I~Ts~~~~yA~~il~~l 78 (162)
T TIGR02251 2 KTLVLDLDETLVHSTFKMPKVDADFKVPVLIDGKIIPVYVFKRPHVDEFLERVSKW-YELVIFTASLEEYADPVLDIL 78 (162)
T ss_pred cEEEEcCCCCcCCCCCCCCCCCCceEEEEEecCcEEEEEEEECCCHHHHHHHHHhc-CEEEEEcCCcHHHHHHHHHHH
Confidence 579999999999774421 1 0 11 0110 15789999999999998 999999997766555444433
No 266
>PTZ00056 glutathione peroxidase; Provisional
Probab=81.09 E-value=11 Score=37.24 Aligned_cols=65 Identities=14% Similarity=0.284 Sum_probs=42.8
Q ss_pred EEEecCC-ccccCCccccc-cccccccccc------hhHHHHHHHHHHCCceEEEEccCc-----ccchHHHHHHHHh
Q psy12533 86 VISDIDG-TITKSDVLGHV-LPIMGKDWAQ------NGVTRLFTKIKENGYKLLYLSARA-----IGQSRVTREYLQS 150 (567)
Q Consensus 86 VISDIDG-TITkSD~lG~i-l~~lGkDwth------~GVa~Ly~~i~~nGY~ilYLSaRp-----i~~a~~Tr~~L~~ 150 (567)
-+-|+|| +++.++..|.. +-..-..|.- +...+|+++++++|..|+-++... ..-.+..+.|++.
T Consensus 23 ~l~d~~G~~vsL~~~kGkvvlv~fwAswC~~C~~e~p~L~~l~~~~~~~g~~vvgv~~~~~~~~e~d~~e~~~~f~~~ 100 (199)
T PTZ00056 23 TVKTLEGTTVPMSSLKNKVLMITNSASKCGLTKKHVDQMNRLHSVFNPLGLEILAFPTSQFLNQEFPNTKDIRKFNDK 100 (199)
T ss_pred EEECCCCCEEeHHHhCCCEEEEEEECCCCCChHHHHHHHHHHHHHHhcCceEEEEecchhccCCCCCCHHHHHHHHHH
Confidence 3457777 46767777765 2222234542 366789999999999999998642 1234667788766
No 267
>PRK11590 hypothetical protein; Provisional
Probab=80.96 E-value=5.4 Score=39.15 Aligned_cols=110 Identities=11% Similarity=0.059 Sum_probs=63.8
Q ss_pred chhHHHHH-HHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhcc-ChhHHHHHH
Q psy12533 113 QNGVTRLF-TKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEK-KPQEFKISC 190 (567)
Q Consensus 113 h~GVa~Ly-~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GPlllsp~~l~~al~REvi~k-~p~~fKi~~ 190 (567)
.+||.++. +.+++.||++.-+||.+...+...-..+.. +. .. .++.+. +-.-+..++... -.-+=|...
T Consensus 97 ~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~--~~---~~--~~i~t~--l~~~~tg~~~g~~c~g~~K~~~ 167 (211)
T PRK11590 97 FPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPW--LP---RV--NLIASQ--MQRRYGGWVLTLRCLGHEKVAQ 167 (211)
T ss_pred CccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHccc--cc---cC--ceEEEE--EEEEEccEECCccCCChHHHHH
Confidence 36888888 567788999999999887665433333321 00 01 122222 100011111111 111236655
Q ss_pred HHHHHHhCCCCCCCEEEecCCcccchhhhhhcCCCCCCEEEEcCCCcee
Q psy12533 191 LRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLSRIFTINSRGEVK 239 (567)
Q Consensus 191 L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~~rIF~In~~g~~~ 239 (567)
|+.. ++. ...-+.+||+..+|.-+...||-| +.|||+.++.
T Consensus 168 l~~~---~~~-~~~~~~aY~Ds~~D~pmL~~a~~~----~~vnp~~~l~ 208 (211)
T PRK11590 168 LERK---IGT-PLRLYSGYSDSKQDNPLLYFCQHR----WRVTPRGELQ 208 (211)
T ss_pred HHHH---hCC-CcceEEEecCCcccHHHHHhCCCC----EEECccHHhh
Confidence 5543 332 344567999999999999999977 7899987664
No 268
>KOG1615|consensus
Probab=80.94 E-value=4.4 Score=40.84 Aligned_cols=124 Identities=15% Similarity=0.167 Sum_probs=78.6
Q ss_pred cccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCC-----CceecCCCchhhhhhhhhhccChh
Q psy12533 110 DWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPE-----GPMLLNPTSLLNAFHTEVIEKKPQ 184 (567)
Q Consensus 110 Dwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~-----GPlllsp~~l~~al~REvi~k~p~ 184 (567)
...-+||-+|.+.++++|-++.-+|+-=..++.-..+-| ++|. --+++..++-+..|. +...-.+
T Consensus 87 ~~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~L--------gi~~~n~yAN~l~fd~~Gk~~gfd--~~~ptsd 156 (227)
T KOG1615|consen 87 PTLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQL--------GIPKSNIYANELLFDKDGKYLGFD--TNEPTSD 156 (227)
T ss_pred CccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHh--------CCcHhhhhhheeeeccCCcccccc--cCCcccc
Confidence 345579999999999999999999997777766665544 3443 223444444443321 1111111
Q ss_pred H-HHHHHHHHHHHhCCCCCCCEEEecCCcccchhhhhhcCCCCCCEEEEcCCCceeccccccccccHHh
Q psy12533 185 E-FKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLSRIFTINSRGEVKHEMTQTFQSTYSN 252 (567)
Q Consensus 185 ~-fKi~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~~rIF~In~~g~~~~~~~~~~~~sY~~ 252 (567)
. =|.+.+..|+..++- . -.+..|+..||..|-. +..-|+ +.-|.++.+..+.+..+|..
T Consensus 157 sggKa~~i~~lrk~~~~--~-~~~mvGDGatDlea~~-----pa~afi-~~~g~~~r~~vk~nak~~~~ 216 (227)
T KOG1615|consen 157 SGGKAEVIALLRKNYNY--K-TIVMVGDGATDLEAMP-----PADAFI-GFGGNVIREGVKANAKWYVT 216 (227)
T ss_pred CCccHHHHHHHHhCCCh--h-eeEEecCCccccccCC-----chhhhh-ccCCceEcHhhHhccHHHHH
Confidence 1 488888888885542 2 3678899999998854 444444 55566666655666666643
No 269
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=80.64 E-value=5.9 Score=38.62 Aligned_cols=54 Identities=20% Similarity=0.108 Sum_probs=42.2
Q ss_pred EEecCCCcEEEEecCCccccCCccccccccccccccchhHHHHHHHHHHCCc--eEEEEccCcccc
Q psy12533 77 FKWRWNDKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGY--KLLYLSARAIGQ 140 (567)
Q Consensus 77 ylw~~~~kiVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nGY--~ilYLSaRpi~~ 140 (567)
.|-..+-|+||+|.|.|||.- .++-.++-+++-++++++.|- +++-+|-.+...
T Consensus 35 ~Lk~~Gik~li~DkDNTL~~~----------~~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~ 90 (168)
T PF09419_consen 35 HLKKKGIKALIFDKDNTLTPP----------YEDEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSS 90 (168)
T ss_pred hhhhcCceEEEEcCCCCCCCC----------CcCcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcc
Confidence 345667788999999999976 456667789999999998864 588899876444
No 270
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=80.26 E-value=4 Score=39.93 Aligned_cols=92 Identities=15% Similarity=0.191 Sum_probs=54.2
Q ss_pred hhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCC--CceecCCCchhhhhhhhhhccChhHHHHHHH
Q psy12533 114 NGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPE--GPMLLNPTSLLNAFHTEVIEKKPQEFKISCL 191 (567)
Q Consensus 114 ~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~--GPlllsp~~l~~al~REvi~k~p~~fKi~~L 191 (567)
+|+.++...++++||++.-+|+.+. ..++..++. .+|.. ..++.+.+ . ....++|+.|...|
T Consensus 95 ~g~~~~l~~l~~~g~~~~i~S~~~~---~~~~~~l~~-----~~l~~~f~~~~~~~~-~------~~~Kp~~~~~~~~~- 158 (222)
T PRK10826 95 PGVREALALCKAQGLKIGLASASPL---HMLEAVLTM-----FDLRDYFDALASAEK-L------PYSKPHPEVYLNCA- 158 (222)
T ss_pred CCHHHHHHHHHHCCCeEEEEeCCcH---HHHHHHHHh-----CcchhcccEEEEccc-C------CCCCCCHHHHHHHH-
Confidence 4788889999999999999999553 344555554 22211 11222221 1 11244555454433
Q ss_pred HHHHHhCCCCCCCEEEecCCcccchhhhhhcCCCC
Q psy12533 192 RDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPL 226 (567)
Q Consensus 192 ~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~ 226 (567)
..+.-...- ...+|++.+|+.+-+++|++.
T Consensus 159 ----~~~~~~~~~-~~~igDs~~Di~aA~~aG~~~ 188 (222)
T PRK10826 159 ----AKLGVDPLT-CVALEDSFNGMIAAKAARMRS 188 (222)
T ss_pred ----HHcCCCHHH-eEEEcCChhhHHHHHHcCCEE
Confidence 222111111 457899999999999999964
No 271
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=79.31 E-value=5.4 Score=38.84 Aligned_cols=130 Identities=20% Similarity=0.182 Sum_probs=63.1
Q ss_pred CCeEEEEecCCccccCCcccc-------------cccccCcC-CcchhHHHHHHHHHHCCceEEEEccCcccchHHHHHH
Q psy12533 357 NDKIVISDIDGTITKSDVLGH-------------VLPIMGKD-WAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREY 422 (567)
Q Consensus 357 ~~kiVIsDIDGTiTkSD~~G~-------------~~~~~GkD-w~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~ 422 (567)
-+|+||||.|+|+--=-.--| +...-|.. .-.|+|.++.+.++++|.+|-..|--+.. +..|+.
T Consensus 2 ~PklvvFDLD~TlW~~~~~~~~~~Pf~~~~~~~~v~D~~g~~v~lypdv~~iL~~L~~~gv~lavASRt~~P--~~A~~~ 79 (169)
T PF12689_consen 2 LPKLVVFDLDYTLWPPWMDTHVGPPFKKISNGNVVVDSRGEEVSLYPDVPEILQELKERGVKLAVASRTDEP--DWAREL 79 (169)
T ss_dssp S-SEEEE-STTTSSSS-TTTSS-S-EEE-TTS--EEETT--EE---TTHHHHHHHHHHCT--EEEEE--S-H--HHHHHH
T ss_pred CCcEEEEcCcCCCCchhHhhccCCCceecCCCCEEEeCCCCEEEeCcCHHHHHHHHHHCCCEEEEEECCCCh--HHHHHH
Confidence 368999999999976322222 22334444 36889999999999999999999843222 455888
Q ss_pred HHhcccCCccCC--CCceecCCCchhhhhhhhhhccChhHHHHHHHHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCC
Q psy12533 423 LQSVKQEDLTLP--EGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIP 500 (567)
Q Consensus 423 L~~~~Q~~~~lP--~GPvl~spd~l~~al~rEvi~k~p~~fK~~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp 500 (567)
|+. ..++ .|+..... ..|.. -| |-+. =|...++.|+.--+-.+.- ..=|+|...-+..=+++||.
T Consensus 80 L~~-----l~i~~~~~~~~~~~-~~F~~--~e-I~~g---sK~~Hf~~i~~~tgI~y~e-MlFFDDe~~N~~~v~~lGV~ 146 (169)
T PF12689_consen 80 LKL-----LEIDDADGDGVPLI-EYFDY--LE-IYPG---SKTTHFRRIHRKTGIPYEE-MLFFDDESRNIEVVSKLGVT 146 (169)
T ss_dssp HHH-----TT-C-----------CCECE--EE-ESSS----HHHHHHHHHHHH---GGG-EEEEES-HHHHHHHHTTT-E
T ss_pred HHh-----cCCCccccccccch-hhcch--hh-eecC---chHHHHHHHHHhcCCChhH-EEEecCchhcceeeEecCcE
Confidence 877 4555 22222212 23321 22 2322 3777777776521111111 12266666666665557765
Q ss_pred C
Q psy12533 501 L 501 (567)
Q Consensus 501 ~ 501 (567)
+
T Consensus 147 ~ 147 (169)
T PF12689_consen 147 C 147 (169)
T ss_dssp E
T ss_pred E
Confidence 4
No 272
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=78.86 E-value=11 Score=45.68 Aligned_cols=103 Identities=11% Similarity=0.138 Sum_probs=65.7
Q ss_pred cCCcchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCC--Cce---ecCCCchhhhhhhh------
Q psy12533 384 KDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPE--GPM---LLNPTSLLNAFHTE------ 452 (567)
Q Consensus 384 kDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~--GPv---l~spd~l~~al~rE------ 452 (567)
+|..++|+.+..+++++.|.+++.+|+....-|..... . .++.. ..+ .++... +..+..|
T Consensus 535 ~Dplr~~v~e~I~~l~~aGI~v~miTGD~~~tA~~ia~---~-----~gi~~~~~~v~~~~~~g~~-l~~~~~~~~~~~~ 605 (917)
T TIGR01116 535 LDPPRPEVADAIEKCRTAGIRVIMITGDNKETAEAICR---R-----IGIFSPDEDVTFKSFTGRE-FDEMGPAKQRAAC 605 (917)
T ss_pred eCCCchhHHHHHHHHHHCCCEEEEecCCCHHHHHHHHH---H-----cCCCCCCccccceeeeHHH-HhhCCHHHHHHhh
Confidence 68999999999999999999999999987655533333 3 33321 111 111111 1111110
Q ss_pred ----hhccChhHHHHHHHHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCC
Q psy12533 453 ----VIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIP 500 (567)
Q Consensus 453 ----vi~k~p~~fK~~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp 500 (567)
|..+--.+.|..+++.++. .+ -.++..|+-.||+.|-++++|-
T Consensus 606 ~~~~v~ar~~P~~K~~iV~~lq~----~g-~~va~iGDG~ND~~alk~AdVG 652 (917)
T TIGR01116 606 RSAVLFSRVEPSHKSELVELLQE----QG-EIVAMTGDGVNDAPALKKADIG 652 (917)
T ss_pred hcCeEEEecCHHHHHHHHHHHHh----cC-CeEEEecCCcchHHHHHhCCee
Confidence 1122223568888888776 22 3468899999999999998773
No 273
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=78.57 E-value=1.1 Score=42.28 Aligned_cols=16 Identities=38% Similarity=0.495 Sum_probs=13.9
Q ss_pred CcEEEEecCCccccCC
Q psy12533 83 DKIVISDIDGTITKSD 98 (567)
Q Consensus 83 ~kiVISDIDGTITkSD 98 (567)
-|+||||+||||..|.
T Consensus 5 ~~~viFD~DGTLiDs~ 20 (188)
T PRK10725 5 YAGLIFDMDGTILDTE 20 (188)
T ss_pred ceEEEEcCCCcCccCH
Confidence 4789999999999883
No 274
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=78.28 E-value=1.2 Score=42.08 Aligned_cols=16 Identities=38% Similarity=0.495 Sum_probs=14.0
Q ss_pred CeEEEEecCCccccCC
Q psy12533 358 DKIVISDIDGTITKSD 373 (567)
Q Consensus 358 ~kiVIsDIDGTiTkSD 373 (567)
-|+||||+||||.-|.
T Consensus 5 ~~~viFD~DGTLiDs~ 20 (188)
T PRK10725 5 YAGLIFDMDGTILDTE 20 (188)
T ss_pred ceEEEEcCCCcCccCH
Confidence 4789999999999874
No 275
>PLN02580 trehalose-phosphatase
Probab=78.28 E-value=3.5 Score=45.16 Aligned_cols=52 Identities=12% Similarity=0.233 Sum_probs=37.7
Q ss_pred CeEEEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHCCceEEEEccCcccch
Q psy12533 358 DKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQS 416 (567)
Q Consensus 358 ~kiVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa 416 (567)
..++.+|.||||+- |.+.-..-...+++.++.+++.+. ..+.-+|||+.-..
T Consensus 119 ~~~LfLDyDGTLaP------Iv~~Pd~A~~s~~~~~aL~~La~~-~~VAIVSGR~~~~L 170 (384)
T PLN02580 119 KIALFLDYDGTLSP------IVDDPDRALMSDAMRSAVKNVAKY-FPTAIISGRSRDKV 170 (384)
T ss_pred CeEEEEecCCccCC------CCCCcccccCCHHHHHHHHHHhhC-CCEEEEeCCCHHHH
Confidence 34578899999983 222222224678999999999988 58999999976544
No 276
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=78.12 E-value=8.2 Score=38.83 Aligned_cols=93 Identities=14% Similarity=0.225 Sum_probs=58.0
Q ss_pred chhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCC--CceecCCCchhhhhhhhhhccChhHHHHHH
Q psy12533 388 QNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPE--GPMLLNPTSLLNAFHTEVIEKKPQEFKISC 465 (567)
Q Consensus 388 h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~--GPvl~spd~l~~al~rEvi~k~p~~fK~~~ 465 (567)
.|||.++...++++||++.-+|+.+...+ +..|+. .+|.+ -.++++.+ .. .-.++|+.|..++
T Consensus 110 ~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~---~~~l~~-----~gl~~~Fd~iv~~~~-~~------~~KP~p~~~~~a~ 174 (248)
T PLN02770 110 LNGLYKLKKWIEDRGLKRAAVTNAPRENA---ELMISL-----LGLSDFFQAVIIGSE-CE------HAKPHPDPYLKAL 174 (248)
T ss_pred CccHHHHHHHHHHcCCeEEEEeCCCHHHH---HHHHHH-----cCChhhCcEEEecCc-CC------CCCCChHHHHHHH
Confidence 56999999999999999999999865554 555555 33321 12333222 11 1134556655443
Q ss_pred HHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCCC
Q psy12533 466 LRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPL 501 (567)
Q Consensus 466 L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~ 501 (567)
+.+.- .+ ... .-+|++..|+.|=+++|++.
T Consensus 175 -~~~~~--~~-~~~--l~vgDs~~Di~aA~~aGi~~ 204 (248)
T PLN02770 175 -EVLKV--SK-DHT--FVFEDSVSGIKAGVAAGMPV 204 (248)
T ss_pred -HHhCC--Ch-hHE--EEEcCCHHHHHHHHHCCCEE
Confidence 22211 11 222 35999999999999999974
No 277
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=78.06 E-value=3.7 Score=49.26 Aligned_cols=60 Identities=13% Similarity=0.308 Sum_probs=44.1
Q ss_pred eCCCeEEEEecCCccccCCcccccccccCcCCcchhHHHHHHHH-HHCCceEEEEccCcccchHHHHHHHHh
Q psy12533 355 RWNDKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKI-KENGYKLLYLSARAIGQSRVTREYLQS 425 (567)
Q Consensus 355 ~~~~kiVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i-~~nGY~iiYLSaRpi~qa~~Tr~~L~~ 425 (567)
....+++++|.||||+..... .-...+++.++.+++ ++.|..+.-+|||+.... ++|+..
T Consensus 593 ~~~~rlI~LDyDGTLlp~~~~--------~~~p~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L---~~~f~~ 653 (854)
T PLN02205 593 RTTTRAILLDYDGTLMPQASI--------DKSPSSKSIDILNTLCRDKNNMVFIVSARSRKTL---ADWFSP 653 (854)
T ss_pred hhcCeEEEEecCCcccCCccc--------cCCCCHHHHHHHHHHHhcCCCEEEEEeCCCHHHH---HHHhCC
Confidence 345788999999999955311 112457899999997 778999999999976554 666644
No 278
>cd03017 PRX_BCP Peroxiredoxin (PRX) family, Bacterioferritin comigratory protein (BCP) subfamily; composed of thioredoxin-dependent thiol peroxidases, widely expressed in pathogenic bacteria, that protect cells against toxicity from reactive oxygen species by reducing and detoxifying hydroperoxides. The protein was named BCP based on its electrophoretic mobility before its function was known. BCP shows substrate selectivity toward fatty acid hydroperoxides rather than hydrogen peroxide or alkyl hydroperoxides. BCP contains the peroxidatic cysteine but appears not to possess a resolving cysteine (some sequences, not all, contain a second cysteine but its role is still unknown). Unlike other PRXs, BCP exists as a monomer. The plant homolog of BCP is PRX Q, which is expressed only in leaves and is cellularly localized in the chloroplasts and the guard cells of stomata. Also included in this subfamily is the fungal nuclear protein, Dot5p (for disrupter of telomere silencing protein 5), w
Probab=78.01 E-value=15 Score=32.72 Aligned_cols=61 Identities=20% Similarity=0.292 Sum_probs=37.6
Q ss_pred EEecCCc-cccCCccccc-ccccC-cCCc------chhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHh
Q psy12533 362 ISDIDGT-ITKSDVLGHV-LPIMG-KDWA------QNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQS 425 (567)
Q Consensus 362 IsDIDGT-iTkSD~~G~~-~~~~G-kDw~------h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~ 425 (567)
+-|++|. ++-++..|.. +-... ..|. -+...+++.++++.|..|+-+|..+ .+..++|++.
T Consensus 8 l~~~~g~~~~l~~~~gk~~ll~f~~~~~cp~C~~~~~~l~~~~~~~~~~~~~vv~is~d~---~~~~~~~~~~ 77 (140)
T cd03017 8 LPDQDGETVSLSDLRGKPVVLYFYPKDDTPGCTKEACDFRDLYEEFKALGAVVIGVSPDS---VESHAKFAEK 77 (140)
T ss_pred ccCCCCCEEeHHHhCCCcEEEEEeCCCCCCchHHHHHHHHHHHHHHHHCCCEEEEEcCCC---HHHHHHHHHH
Confidence 3456664 5556666653 11111 2332 2356678888999999999999753 3556777766
No 279
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=76.51 E-value=11 Score=46.14 Aligned_cols=110 Identities=15% Similarity=0.234 Sum_probs=68.2
Q ss_pred cCCcchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCC---------ccCC-------C--CceecCCCch
Q psy12533 384 KDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQED---------LTLP-------E--GPMLLNPTSL 445 (567)
Q Consensus 384 kDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~---------~~lP-------~--GPvl~spd~l 445 (567)
+|..+++|.+..++++++|.+++-+|||+.-.+...-.=+.-+..+. .+++ + ..++. ...+
T Consensus 566 ~Dplr~~v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~vi~-G~~l 644 (997)
T TIGR01106 566 IDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETVEDIAARLNIPVSQVNPRDAKACVVH-GSDL 644 (997)
T ss_pred cCCChHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCccchhhhhhhccccccccccccccceEEE-hHHh
Confidence 69999999999999999999999999998877643333221111000 0000 0 01221 1111
Q ss_pred hhhhhh----h--------hhccChhHHHHHHHHHHHhhCCCCCCCEEEecCCCcccHHhHHHc--CCC
Q psy12533 446 LNAFHT----E--------VIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAV--GIP 500 (567)
Q Consensus 446 ~~al~r----E--------vi~k~p~~fK~~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~v--GIp 500 (567)
..+.. + |..+-.-+.|..+.+.++.. +. .+|..|+-.||+-|-+++ ||.
T Consensus 645 -~~l~~~el~~~~~~~~~~VfaR~sPeqK~~IV~~lq~~----g~-vv~~~GDG~ND~paLk~AdVGia 707 (997)
T TIGR01106 645 -KDMTSEQLDEILKYHTEIVFARTSPQQKLIIVEGCQRQ----GA-IVAVTGDGVNDSPALKKADIGVA 707 (997)
T ss_pred -hhCCHHHHHHHHHhcCCEEEEECCHHHHHHHHHHHHHC----CC-EEEEECCCcccHHHHhhCCccee
Confidence 11111 1 33333346799998888872 33 689999999999999875 664
No 280
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=76.17 E-value=4.3 Score=48.68 Aligned_cols=58 Identities=12% Similarity=0.316 Sum_probs=43.1
Q ss_pred CCcEEEEecCCccccCCccccccccccccccchhHHHHHHHH-HHCCceEEEEccCcccchHHHHHHHHh
Q psy12533 82 NDKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKI-KENGYKLLYLSARAIGQSRVTREYLQS 150 (567)
Q Consensus 82 ~~kiVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i-~~nGY~ilYLSaRpi~~a~~Tr~~L~~ 150 (567)
..+++++|.|||++..... .....+++.++.+++ ++.|..+.-+|||+... .+.|+..
T Consensus 595 ~~rlI~LDyDGTLlp~~~~--------~~~p~~~~~~~L~~L~~d~g~~VaIvSGR~~~~---L~~~f~~ 653 (854)
T PLN02205 595 TTRAILLDYDGTLMPQASI--------DKSPSSKSIDILNTLCRDKNNMVFIVSARSRKT---LADWFSP 653 (854)
T ss_pred cCeEEEEecCCcccCCccc--------cCCCCHHHHHHHHHHHhcCCCEEEEEeCCCHHH---HHHHhCC
Confidence 4678999999999965321 113446889999997 77799999999998654 4666643
No 281
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=75.69 E-value=8.1 Score=37.64 Aligned_cols=130 Identities=18% Similarity=0.144 Sum_probs=63.6
Q ss_pred CCcEEEEecCCccccCCccc-------------ccccccccc-ccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHH
Q psy12533 82 NDKIVISDIDGTITKSDVLG-------------HVLPIMGKD-WAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREY 147 (567)
Q Consensus 82 ~~kiVISDIDGTITkSD~lG-------------~il~~lGkD-wth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~ 147 (567)
-.|+||||.|+|+-.=-.-- .+...-|.. .-.++|.+..+.++++|.+|-..|.-+.. +..|+.
T Consensus 2 ~PklvvFDLD~TlW~~~~~~~~~~Pf~~~~~~~~v~D~~g~~v~lypdv~~iL~~L~~~gv~lavASRt~~P--~~A~~~ 79 (169)
T PF12689_consen 2 LPKLVVFDLDYTLWPPWMDTHVGPPFKKISNGNVVVDSRGEEVSLYPDVPEILQELKERGVKLAVASRTDEP--DWAREL 79 (169)
T ss_dssp S-SEEEE-STTTSSSS-TTTSS-S-EEE-TTS--EEETT--EE---TTHHHHHHHHHHCT--EEEEE--S-H--HHHHHH
T ss_pred CCcEEEEcCcCCCCchhHhhccCCCceecCCCCEEEeCCCCEEEeCcCHHHHHHHHHHCCCEEEEEECCCCh--HHHHHH
Confidence 36899999999997632211 222234444 66789999999999999999988843222 556777
Q ss_pred HHhcccCCccCC--CCceecCCCchhhhhhhhhhccChhHHHHHHHHHHHHhCCCCCCCEEEecCCcccchhhhhhcCCC
Q psy12533 148 LQSVKQEDLTLP--EGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIP 225 (567)
Q Consensus 148 L~~~~q~~~~LP--~GPlllsp~~l~~al~REvi~k~p~~fKi~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp 225 (567)
|+. ..++ .|+..... ..|.. ..|.+. =|..-++.|+..-.-.+.- ..=|+|....+..=++.||.
T Consensus 80 L~~-----l~i~~~~~~~~~~~-~~F~~---~eI~~g---sK~~Hf~~i~~~tgI~y~e-MlFFDDe~~N~~~v~~lGV~ 146 (169)
T PF12689_consen 80 LKL-----LEIDDADGDGVPLI-EYFDY---LEIYPG---SKTTHFRRIHRKTGIPYEE-MLFFDDESRNIEVVSKLGVT 146 (169)
T ss_dssp HHH-----TT-C-----------CCECE---EEESSS----HHHHHHHHHHHH---GGG-EEEEES-HHHHHHHHTTT-E
T ss_pred HHh-----cCCCccccccccch-hhcch---hheecC---chHHHHHHHHHhcCCChhH-EEEecCchhcceeeEecCcE
Confidence 876 4444 22222111 22321 223333 3777777777532211122 23367766666665567765
Q ss_pred C
Q psy12533 226 L 226 (567)
Q Consensus 226 ~ 226 (567)
+
T Consensus 147 ~ 147 (169)
T PF12689_consen 147 C 147 (169)
T ss_dssp E
T ss_pred E
Confidence 5
No 282
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=75.62 E-value=11 Score=37.94 Aligned_cols=92 Identities=14% Similarity=0.235 Sum_probs=55.2
Q ss_pred hhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCC--CceecCCCchhhhhhhhhhccChhHHHHHHH
Q psy12533 114 NGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPE--GPMLLNPTSLLNAFHTEVIEKKPQEFKISCL 191 (567)
Q Consensus 114 ~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~--GPlllsp~~l~~al~REvi~k~p~~fKi~~L 191 (567)
+||.++...++++||++.-+|+.+...+ +..|+. .+|.+ -.++++.+ .. ...++|+-|..++
T Consensus 111 pgv~e~L~~L~~~g~~l~I~Tn~~~~~~---~~~l~~-----~gl~~~Fd~iv~~~~-~~------~~KP~p~~~~~a~- 174 (248)
T PLN02770 111 NGLYKLKKWIEDRGLKRAAVTNAPRENA---ELMISL-----LGLSDFFQAVIIGSE-CE------HAKPHPDPYLKAL- 174 (248)
T ss_pred ccHHHHHHHHHHcCCeEEEEeCCCHHHH---HHHHHH-----cCChhhCcEEEecCc-CC------CCCCChHHHHHHH-
Confidence 4888999999999999999999765444 555555 33321 12333321 11 1233444444333
Q ss_pred HHHHHhCCCCCCCEEEecCCcccchhhhhhcCCCC
Q psy12533 192 RDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPL 226 (567)
Q Consensus 192 ~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~ 226 (567)
+.+ .+ .+ .. ..-+|++..|+.+=+++|++.
T Consensus 175 ~~~-~~-~~-~~--~l~vgDs~~Di~aA~~aGi~~ 204 (248)
T PLN02770 175 EVL-KV-SK-DH--TFVFEDSVSGIKAGVAAGMPV 204 (248)
T ss_pred HHh-CC-Ch-hH--EEEEcCCHHHHHHHHHCCCEE
Confidence 221 11 11 12 345899999999999999974
No 283
>PLN02412 probable glutathione peroxidase
Probab=75.47 E-value=19 Score=34.27 Aligned_cols=51 Identities=24% Similarity=0.427 Sum_probs=32.4
Q ss_pred EEecCC-ccccCCccccc-cccccccccc------hhHHHHHHHHHHCCceEEEEccCc
Q psy12533 87 ISDIDG-TITKSDVLGHV-LPIMGKDWAQ------NGVTRLFTKIKENGYKLLYLSARA 137 (567)
Q Consensus 87 ISDIDG-TITkSD~lG~i-l~~lGkDwth------~GVa~Ly~~i~~nGY~ilYLSaRp 137 (567)
.-|.|| +++.++..|.. +-..-..|.- +...+|+++++++|..|+=+|+-+
T Consensus 14 l~d~~G~~v~l~~~~gk~vlv~f~a~~C~~c~~e~~~l~~l~~~~~~~g~~vvgv~~~~ 72 (167)
T PLN02412 14 VKDIGGNDVSLNQYKGKVLLIVNVASKCGLTDSNYKELNVLYEKYKEQGFEILAFPCNQ 72 (167)
T ss_pred EECCCCCEEeHHHhCCCEEEEEEeCCCCCChHHHHHHHHHHHHHHhhCCcEEEEecccc
Confidence 346666 46666666643 1111123322 356779999999999999999753
No 284
>TIGR01497 kdpB K+-transporting ATPase, B subunit. One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.
Probab=75.05 E-value=12 Score=43.97 Aligned_cols=87 Identities=20% Similarity=0.305 Sum_probs=64.3
Q ss_pred cCCcchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhccChhHHHH
Q psy12533 384 KDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKI 463 (567)
Q Consensus 384 kDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GPvl~spd~l~~al~rEvi~k~p~~fK~ 463 (567)
+|..++|+.+.++.+++.|++++-+|+....-+... -+. .++.+ .+. .-.| +-|.
T Consensus 444 ~D~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~i---A~~-----lGI~~---------v~a-------~~~P-edK~ 498 (675)
T TIGR01497 444 KDIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAI---AAE-----AGVDD---------FIA-------EATP-EDKI 498 (675)
T ss_pred cccchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHH---HHH-----cCCCE---------EEc-------CCCH-HHHH
Confidence 799999999999999999999999999765555333 333 33421 111 1245 4499
Q ss_pred HHHHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCC
Q psy12533 464 SCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIP 500 (567)
Q Consensus 464 ~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp 500 (567)
++++.+++ .+. .++-.|+-.||+-|-+++++.
T Consensus 499 ~~v~~lq~----~g~-~VamvGDG~NDapAL~~AdvG 530 (675)
T TIGR01497 499 ALIRQEQA----EGK-LVAMTGDGTNDAPALAQADVG 530 (675)
T ss_pred HHHHHHHH----cCC-eEEEECCCcchHHHHHhCCEe
Confidence 99999987 233 488999999999999998665
No 285
>PRK10671 copA copper exporting ATPase; Provisional
Probab=74.64 E-value=11 Score=44.85 Aligned_cols=86 Identities=14% Similarity=0.268 Sum_probs=63.4
Q ss_pred ccccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhccChhHHHH
Q psy12533 109 KDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKI 188 (567)
Q Consensus 109 kDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GPlllsp~~l~~al~REvi~k~p~~fKi 188 (567)
.|-.++|+.++...+++.|+++.-+|+.....+ +..++. .+++. .+. + -.|+. |.
T Consensus 648 ~d~~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a---~~ia~~-----lgi~~---------~~~----~---~~p~~-K~ 702 (834)
T PRK10671 648 RDPLRSDSVAALQRLHKAGYRLVMLTGDNPTTA---NAIAKE-----AGIDE---------VIA----G---VLPDG-KA 702 (834)
T ss_pred cCcchhhHHHHHHHHHHCCCeEEEEcCCCHHHH---HHHHHH-----cCCCE---------EEe----C---CCHHH-HH
Confidence 677899999999999999999999999766544 444444 44432 111 1 12443 88
Q ss_pred HHHHHHHHhCCCCCCCEEEecCCcccchhhhhhcCC
Q psy12533 189 SCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGI 224 (567)
Q Consensus 189 ~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGI 224 (567)
++++.++.. .. -++.+|+..+|+.|-+++|+
T Consensus 703 ~~i~~l~~~----~~-~v~~vGDg~nD~~al~~Agv 733 (834)
T PRK10671 703 EAIKRLQSQ----GR-QVAMVGDGINDAPALAQADV 733 (834)
T ss_pred HHHHHHhhc----CC-EEEEEeCCHHHHHHHHhCCe
Confidence 888888754 22 37899999999999999988
No 286
>PLN02580 trehalose-phosphatase
Probab=74.29 E-value=4.9 Score=43.98 Aligned_cols=53 Identities=11% Similarity=0.234 Sum_probs=39.0
Q ss_pred CCcEEEEecCCccccCCccccccccccccccchhHHHHHHHHHHCCceEEEEccCcccch
Q psy12533 82 NDKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQS 141 (567)
Q Consensus 82 ~~kiVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a 141 (567)
...++.+|.||||+- |.+.-......+++.++.+.+.+. .++.-+|||+.-..
T Consensus 118 k~~~LfLDyDGTLaP------Iv~~Pd~A~~s~~~~~aL~~La~~-~~VAIVSGR~~~~L 170 (384)
T PLN02580 118 KKIALFLDYDGTLSP------IVDDPDRALMSDAMRSAVKNVAKY-FPTAIISGRSRDKV 170 (384)
T ss_pred CCeEEEEecCCccCC------CCCCcccccCCHHHHHHHHHHhhC-CCEEEEeCCCHHHH
Confidence 444788899999983 222222335677999999999988 58999999987544
No 287
>cd03015 PRX_Typ2cys Peroxiredoxin (PRX) family, Typical 2-Cys PRX subfamily; PRXs are thiol-specific antioxidant (TSA) proteins, which confer a protective role in cells through its peroxidase activity by reducing hydrogen peroxide, peroxynitrite, and organic hydroperoxides. The functional unit of typical 2-cys PRX is a homodimer. A unique intermolecular redox-active disulfide center is utilized for its activity. Upon reaction with peroxides, its peroxidatic cysteine is oxidized into a sulfenic acid intermediate which is resolved by bonding with the resolving cysteine from the other subunit of the homodimer. This intermolecular disulfide bond is then reduced by thioredoxin, tryparedoxin or AhpF. Typical 2-cys PRXs, like 1-cys PRXs, form decamers which are stabilized by reduction of the active site cysteine. Typical 2-cys PRX interacts through beta strands at one edge of the monomer (B-type interface) to form the functional homodimer, and uses an A-type interface (similar to the dimeric
Probab=74.07 E-value=17 Score=34.48 Aligned_cols=135 Identities=18% Similarity=0.243 Sum_probs=74.2
Q ss_pred EEEecCC-----ccccCCccccc--ccccCcCCc------chhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcc
Q psy12533 361 VISDIDG-----TITKSDVLGHV--LPIMGKDWA------QNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVK 427 (567)
Q Consensus 361 VIsDIDG-----TiTkSD~~G~~--~~~~GkDw~------h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~ 427 (567)
.+.|++| +++.++..|.. +-.....|+ -+...+++.++++.|..++-+|.-+. .....|++...
T Consensus 9 ~~~~~~g~~~~~~~~l~~~~Gk~vvl~F~~~~~c~~C~~~l~~l~~~~~~~~~~~v~vv~Is~d~~---~~~~~~~~~~~ 85 (173)
T cd03015 9 KATAVVPNGEFKEISLSDYKGKWVVLFFYPLDFTFVCPTEIIAFSDRYEEFKKLNAEVLGVSTDSH---FSHLAWRNTPR 85 (173)
T ss_pred EeecccCCCCceEEehHHhCCCEEEEEEECCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEecCCH---HHHHHHHHhhh
Confidence 4556776 67777777743 222223332 33566788889999999999987543 23356666533
Q ss_pred cCC--ccCCCCceecCCCchhhhhhhhhhccChhHHHHHHHHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCCCCCEE
Q psy12533 428 QED--LTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLSRIF 505 (567)
Q Consensus 428 Q~~--~~lP~GPvl~spd~l~~al~rEvi~k~p~~fK~~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~~rIF 505 (567)
..+ .++| -|++.-+++-+ .+. ||-...+ .|++...+|
T Consensus 86 ~~~~~~~~~-f~~l~D~~~~~-------------------~~~---------------~gv~~~~------~~~~~p~~~ 124 (173)
T cd03015 86 KEGGLGKIN-FPLLADPKKKI-------------------SRD---------------YGVLDEE------EGVALRGTF 124 (173)
T ss_pred hhCCccCcc-eeEEECCchhH-------------------HHH---------------hCCcccc------CCceeeEEE
Confidence 211 2333 34554333211 110 1100000 144455899
Q ss_pred EEcCCCcccccccc--cccccHhhHHhhhhhcCCCC
Q psy12533 506 TINSRGEVKHEMTQ--TFQSTYSNMSYLVDQMFPSS 539 (567)
Q Consensus 506 ~In~~g~~~~~~~~--~~~~sY~~l~~~vd~~FP~~ 539 (567)
+||++|.+...... ........+-+.++.+=...
T Consensus 125 lID~~G~I~~~~~~~~~~~~~~~~il~~l~~~~~~~ 160 (173)
T cd03015 125 IIDPEGIIRHITVNDLPVGRSVDETLRVLDALQFVE 160 (173)
T ss_pred EECCCCeEEEEEecCCCCCCCHHHHHHHHHHhhhhh
Confidence 99999999876532 22345666777777663333
No 288
>PRK11587 putative phosphatase; Provisional
Probab=73.71 E-value=11 Score=36.74 Aligned_cols=92 Identities=15% Similarity=0.260 Sum_probs=55.5
Q ss_pred chhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhh--ccChhHHHHHH
Q psy12533 388 QNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVI--EKKPQEFKISC 465 (567)
Q Consensus 388 h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GPvl~spd~l~~al~rEvi--~k~p~~fK~~~ 465 (567)
-||+.++...++++||++..+|+.+.... +..+.. .+...+. .+.+.+ ++. .++|+.|..++
T Consensus 85 ~pg~~e~L~~L~~~g~~~~ivTn~~~~~~---~~~l~~---~~l~~~~--~i~~~~--------~~~~~KP~p~~~~~~~ 148 (218)
T PRK11587 85 LPGAIALLNHLNKLGIPWAIVTSGSVPVA---SARHKA---AGLPAPE--VFVTAE--------RVKRGKPEPDAYLLGA 148 (218)
T ss_pred CcCHHHHHHHHHHcCCcEEEEcCCCchHH---HHHHHh---cCCCCcc--EEEEHH--------HhcCCCCCcHHHHHHH
Confidence 57999999999999999999999765432 333433 1222221 122221 222 33446665443
Q ss_pred HHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCCC
Q psy12533 466 LRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPL 501 (567)
Q Consensus 466 L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~ 501 (567)
- .+ .+ .+ .. ..-+|++.+|+.+=+++|+..
T Consensus 149 ~-~~-g~-~p-~~--~l~igDs~~di~aA~~aG~~~ 178 (218)
T PRK11587 149 Q-LL-GL-AP-QE--CVVVEDAPAGVLSGLAAGCHV 178 (218)
T ss_pred H-Hc-CC-Cc-cc--EEEEecchhhhHHHHHCCCEE
Confidence 2 11 11 11 22 346899999999999999963
No 289
>cd03015 PRX_Typ2cys Peroxiredoxin (PRX) family, Typical 2-Cys PRX subfamily; PRXs are thiol-specific antioxidant (TSA) proteins, which confer a protective role in cells through its peroxidase activity by reducing hydrogen peroxide, peroxynitrite, and organic hydroperoxides. The functional unit of typical 2-cys PRX is a homodimer. A unique intermolecular redox-active disulfide center is utilized for its activity. Upon reaction with peroxides, its peroxidatic cysteine is oxidized into a sulfenic acid intermediate which is resolved by bonding with the resolving cysteine from the other subunit of the homodimer. This intermolecular disulfide bond is then reduced by thioredoxin, tryparedoxin or AhpF. Typical 2-cys PRXs, like 1-cys PRXs, form decamers which are stabilized by reduction of the active site cysteine. Typical 2-cys PRX interacts through beta strands at one edge of the monomer (B-type interface) to form the functional homodimer, and uses an A-type interface (similar to the dimeric
Probab=73.47 E-value=34 Score=32.39 Aligned_cols=135 Identities=15% Similarity=0.183 Sum_probs=75.4
Q ss_pred EEEEecCC-----ccccCCccccc--cccccccccc------hhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhc
Q psy12533 85 IVISDIDG-----TITKSDVLGHV--LPIMGKDWAQ------NGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSV 151 (567)
Q Consensus 85 iVISDIDG-----TITkSD~lG~i--l~~lGkDwth------~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~ 151 (567)
..+.|++| +++-++..|.. +-.....|+. +...+++.++++.|..++-+|.-+. .....|++..
T Consensus 8 f~~~~~~g~~~~~~~~l~~~~Gk~vvl~F~~~~~c~~C~~~l~~l~~~~~~~~~~~v~vv~Is~d~~---~~~~~~~~~~ 84 (173)
T cd03015 8 FKATAVVPNGEFKEISLSDYKGKWVVLFFYPLDFTFVCPTEIIAFSDRYEEFKKLNAEVLGVSTDSH---FSHLAWRNTP 84 (173)
T ss_pred CEeecccCCCCceEEehHHhCCCEEEEEEECCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEecCCH---HHHHHHHHhh
Confidence 34567776 67777777753 3222234432 2566788899999999999987543 2334566653
Q ss_pred ccCC--ccCCCCceecCCCchhhhhhhhhhccChhHHHHHHHHHHHHhCCCCCCCEEEecCCcccchhhhhhcCCCCCCE
Q psy12533 152 KQED--LTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLSRI 229 (567)
Q Consensus 152 ~q~~--~~LP~GPlllsp~~l~~al~REvi~k~p~~fKi~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~~rI 229 (567)
...+ .++| -|++.-+++-+ ...|. -...+ .|++...+
T Consensus 85 ~~~~~~~~~~-f~~l~D~~~~~-----------------------~~~~g-----------v~~~~------~~~~~p~~ 123 (173)
T cd03015 85 RKEGGLGKIN-FPLLADPKKKI-----------------------SRDYG-----------VLDEE------EGVALRGT 123 (173)
T ss_pred hhhCCccCcc-eeEEECCchhH-----------------------HHHhC-----------Ccccc------CCceeeEE
Confidence 2211 2343 35554443221 11111 00000 14445589
Q ss_pred EEEcCCCceecccccc--ccccHHhHHhhhhhcCCC
Q psy12533 230 FTINSRGEVKHEMTQT--FQSTYSNMSYLVDQMFPS 263 (567)
Q Consensus 230 F~In~~g~~~~~~~~~--~~~sY~~l~~~vd~~fP~ 263 (567)
|+||++|.++...... .......+-+.++.+=..
T Consensus 124 ~lID~~G~I~~~~~~~~~~~~~~~~il~~l~~~~~~ 159 (173)
T cd03015 124 FIIDPEGIIRHITVNDLPVGRSVDETLRVLDALQFV 159 (173)
T ss_pred EEECCCCeEEEEEecCCCCCCCHHHHHHHHHHhhhh
Confidence 9999999998765332 234566677777666333
No 290
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=72.83 E-value=5.9 Score=37.02 Aligned_cols=93 Identities=12% Similarity=0.224 Sum_probs=51.8
Q ss_pred cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhccChhHHHHHHH
Q psy12533 112 AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCL 191 (567)
Q Consensus 112 th~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GPlllsp~~l~~al~REvi~k~p~~fKi~~L 191 (567)
..+||.++.+.++++||++.-+|++ ...+..|+...- ..+.+ -++.+.+ .....++|+.|... +
T Consensus 89 ~~~g~~~~l~~l~~~g~~i~i~S~~-----~~~~~~l~~~~l--~~~f~-~v~~~~~-------~~~~kp~~~~~~~~-~ 152 (185)
T TIGR02009 89 VLPGIENFLKRLKKKGIAVGLGSSS-----KNADRILAKLGL--TDYFD-AIVDADE-------VKEGKPHPETFLLA-A 152 (185)
T ss_pred CCcCHHHHHHHHHHcCCeEEEEeCc-----hhHHHHHHHcCh--HHHCC-Eeeehhh-------CCCCCCChHHHHHH-H
Confidence 4559999999999999999999987 234555655111 01111 1121110 01112334444422 2
Q ss_pred HHHHHhCCCCCCCEEEecCCcccchhhhhhcCCC
Q psy12533 192 RDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIP 225 (567)
Q Consensus 192 ~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp 225 (567)
+.+ .+ ++ .. ...+|++..|+.+=+++|++
T Consensus 153 ~~~-~~-~~-~~--~v~IgD~~~di~aA~~~G~~ 181 (185)
T TIGR02009 153 ELL-GV-SP-NE--CVVFEDALAGVQAARAAGMF 181 (185)
T ss_pred HHc-CC-CH-HH--eEEEeCcHhhHHHHHHCCCe
Confidence 222 11 11 12 23578999999999999986
No 291
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=72.70 E-value=4.2 Score=38.01 Aligned_cols=93 Identities=17% Similarity=0.266 Sum_probs=53.7
Q ss_pred cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhccChhHHHHHHH
Q psy12533 387 AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCL 466 (567)
Q Consensus 387 ~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GPvl~spd~l~~al~rEvi~k~p~~fK~~~L 466 (567)
..|||.++.+.++++||++.-+|+... + +..|+. .++-. .-+..+.+-.-..-.++|+.|+..+=
T Consensus 88 ~~pg~~~~L~~L~~~g~~~~i~s~~~~--~---~~~l~~-----~~l~~-----~f~~~~~~~~~~~~kp~p~~~~~~~~ 152 (185)
T TIGR01990 88 VLPGIKNLLDDLKKNNIKIALASASKN--A---PTVLEK-----LGLID-----YFDAIVDPAEIKKGKPDPEIFLAAAE 152 (185)
T ss_pred cCccHHHHHHHHHHCCCeEEEEeCCcc--H---HHHHHh-----cCcHh-----hCcEEEehhhcCCCCCChHHHHHHHH
Confidence 357999999999999999999998642 1 334544 22210 01122211110112345566665442
Q ss_pred HHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCC
Q psy12533 467 RDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIP 500 (567)
Q Consensus 467 ~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp 500 (567)
.+ .+ ++ ... .-+|++.+|+.+=+++|++
T Consensus 153 -~~-~~-~~-~~~--v~vgD~~~di~aA~~aG~~ 180 (185)
T TIGR01990 153 -GL-GV-SP-SEC--IGIEDAQAGIEAIKAAGMF 180 (185)
T ss_pred -Hc-CC-CH-HHe--EEEecCHHHHHHHHHcCCE
Confidence 11 11 11 222 3588999999999999985
No 292
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=72.11 E-value=13 Score=36.40 Aligned_cols=113 Identities=19% Similarity=0.309 Sum_probs=68.0
Q ss_pred CCcEEEEecCCccccCCc----cccccccccccccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCcc
Q psy12533 82 NDKIVISDIDGTITKSDV----LGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLT 157 (567)
Q Consensus 82 ~~kiVISDIDGTITkSD~----lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~ 157 (567)
+-|.+|+|||||+|.--. -|+.+ -.--++.|.. .+.|.+.|-++--+|+|.-...+ .=.+. -+
T Consensus 7 ~IkLli~DVDGvLTDG~ly~~~~Gee~---KaFnv~DG~G--ik~l~~~Gi~vAIITGr~s~ive---~Ra~~-----LG 73 (170)
T COG1778 7 NIKLLILDVDGVLTDGKLYYDENGEEI---KAFNVRDGHG--IKLLLKSGIKVAIITGRDSPIVE---KRAKD-----LG 73 (170)
T ss_pred hceEEEEeccceeecCeEEEcCCCcee---eeeeccCcHH--HHHHHHcCCeEEEEeCCCCHHHH---HHHHH-----cC
Confidence 457899999999996321 22222 1123555543 24578899999999999655442 22222 23
Q ss_pred CCCCceecCCCchhhhhhhhhhccChhHHHHHHHHHHHHhCCCCCCCEEEecCCcccchhhhhhcCCCCC
Q psy12533 158 LPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLS 227 (567)
Q Consensus 158 LP~GPlllsp~~l~~al~REvi~k~p~~fKi~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~~ 227 (567)
++. ++- - +. =|.+++.+|+....-...- .|-.|+-..|.-+.+++|++-.
T Consensus 74 I~~---------~~q----G-~~-----dK~~a~~~L~~~~~l~~e~-~ayiGDD~~Dlpvm~~vGls~a 123 (170)
T COG1778 74 IKH---------LYQ----G-IS-----DKLAAFEELLKKLNLDPEE-VAYVGDDLVDLPVMEKVGLSVA 123 (170)
T ss_pred Cce---------eee----c-hH-----hHHHHHHHHHHHhCCCHHH-hhhhcCccccHHHHHHcCCccc
Confidence 321 110 0 11 2778877777654321111 4556888999999999998854
No 293
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=72.10 E-value=7.7 Score=39.79 Aligned_cols=92 Identities=12% Similarity=0.174 Sum_probs=55.7
Q ss_pred hhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCC--CceecCCCchhhhhhhhhhccChhHHHHHHH
Q psy12533 114 NGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPE--GPMLLNPTSLLNAFHTEVIEKKPQEFKISCL 191 (567)
Q Consensus 114 ~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~--GPlllsp~~l~~al~REvi~k~p~~fKi~~L 191 (567)
+|+.++...++++||++.-+|+.+...+ +..|+. ++|.. --++.+.+ .. ....+|+.|..++
T Consensus 112 pg~~e~L~~L~~~g~~l~I~Tn~~~~~~---~~~l~~-----~gl~~~Fd~ii~~~d-~~------~~KP~Pe~~~~a~- 175 (260)
T PLN03243 112 PGSREFVQALKKHEIPIAVASTRPRRYL---ERAIEA-----VGMEGFFSVVLAAED-VY------RGKPDPEMFMYAA- 175 (260)
T ss_pred CCHHHHHHHHHHCCCEEEEEeCcCHHHH---HHHHHH-----cCCHhhCcEEEeccc-CC------CCCCCHHHHHHHH-
Confidence 5888889999999999999999776444 444544 22211 11222221 10 1244555665444
Q ss_pred HHHHHhCCCCCCCEEEecCCcccchhhhhhcCCCC
Q psy12533 192 RDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPL 226 (567)
Q Consensus 192 ~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~ 226 (567)
+.+ .+ .+ .. ...+|++.+|+.|=+++|+..
T Consensus 176 ~~l-~~-~p-~~--~l~IgDs~~Di~aA~~aG~~~ 205 (260)
T PLN03243 176 ERL-GF-IP-ER--CIVFGNSNSSVEAAHDGCMKC 205 (260)
T ss_pred HHh-CC-Ch-HH--eEEEcCCHHHHHHHHHcCCEE
Confidence 221 11 11 11 456999999999999999963
No 294
>PRK13190 putative peroxiredoxin; Provisional
Probab=72.05 E-value=11 Score=37.16 Aligned_cols=128 Identities=16% Similarity=0.244 Sum_probs=71.6
Q ss_pred ecCCccccCCccccc--cccccccccch------hHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccC-CccCC
Q psy12533 89 DIDGTITKSDVLGHV--LPIMGKDWAQN------GVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQE-DLTLP 159 (567)
Q Consensus 89 DIDGTITkSD~lG~i--l~~lGkDwth~------GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~-~~~LP 159 (567)
|.+|+++.+|..|.. +-..=.+|+-. ..++++.+++++|.+++-+|.-+. ..-++|++.+.+. |..+|
T Consensus 15 ~~~g~v~l~d~~gk~vvL~~~p~~~cp~C~~El~~l~~~~~~f~~~~~~vi~vS~D~~---~~~~~w~~~~~~~~g~~~~ 91 (202)
T PRK13190 15 TTKGPIDLSKYKGKWVLLFSHPADFTPVCTTEFIAFSRRYEDFKKLGVELVGLSVDSI---YSHIAWLRDIEERFGIKIP 91 (202)
T ss_pred cCCCcEeHHHhCCCEEEEEEEcCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCCH---HHHHHHHHhHHHhcCCCce
Confidence 456777777766652 21233455533 677888899999999999987543 2335666654432 33333
Q ss_pred CCceecCCCchhhhhhhhhhccChhHHHHHHHHHHHHhCCCCCCCEEEecCCcccchhhhhhcCCCCCCEEEEcCCCcee
Q psy12533 160 EGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLSRIFTINSRGEVK 239 (567)
Q Consensus 160 ~GPlllsp~~l~~al~REvi~k~p~~fKi~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~~rIF~In~~g~~~ 239 (567)
=|++.-+++- +...| |-... ..|.+.--+|+||++|.|+
T Consensus 92 -fPll~D~~~~-----------------------ia~~y-----------gv~~~------~~g~~~p~~fiId~~G~I~ 130 (202)
T PRK13190 92 -FPVIADIDKE-----------------------LAREY-----------NLIDE------NSGATVRGVFIIDPNQIVR 130 (202)
T ss_pred -EEEEECCChH-----------------------HHHHc-----------CCccc------cCCcEEeEEEEECCCCEEE
Confidence 3566555422 11111 11000 1133445569999999998
Q ss_pred cccccc--ccccHHhHHhhhhhc
Q psy12533 240 HEMTQT--FQSTYSNMSYLVDQM 260 (567)
Q Consensus 240 ~~~~~~--~~~sY~~l~~~vd~~ 260 (567)
...... .-.++..|-..+|.+
T Consensus 131 ~~~~~~~~~gr~~~ellr~l~~l 153 (202)
T PRK13190 131 WMIYYPAETGRNIDEIIRITKAL 153 (202)
T ss_pred EEEEeCCCCCCCHHHHHHHHHHh
Confidence 654222 123566666666653
No 295
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=71.35 E-value=8.8 Score=36.33 Aligned_cols=89 Identities=22% Similarity=0.337 Sum_probs=58.5
Q ss_pred ccccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhccChhHHH-
Q psy12533 109 KDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFK- 187 (567)
Q Consensus 109 kDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GPlllsp~~l~~al~REvi~k~p~~fK- 187 (567)
.|..++|+.++.+.+++.|+++.-+|+....-+ +...+. .++++- ..++ ++. .+|+. |
T Consensus 125 ~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a---~~~~~~-----lgi~~~-------~v~a----~~~-~kP~~-k~ 183 (215)
T PF00702_consen 125 RDPLRPGAKEALQELKEAGIKVAILTGDNESTA---SAIAKQ-----LGIFDS-------IVFA----RVI-GKPEP-KI 183 (215)
T ss_dssp EEEBHTTHHHHHHHHHHTTEEEEEEESSEHHHH---HHHHHH-----TTSCSE-------EEEE----SHE-TTTHH-HH
T ss_pred cCcchhhhhhhhhhhhccCcceeeeeccccccc---cccccc-----cccccc-------cccc----ccc-ccccc-hh
Confidence 567889999999999999999999998665554 444444 445311 1111 111 34532 4
Q ss_pred -HHHHHHHHHhCCCCCCCEEEecCCcccchhhhhhcC
Q psy12533 188 -ISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVG 223 (567)
Q Consensus 188 -i~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vG 223 (567)
..+++.++.. .. -++.+|+..+|+.|=+++|
T Consensus 184 ~~~~i~~l~~~----~~-~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 184 FLRIIKELQVK----PG-EVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp HHHHHHHHTCT----GG-GEEEEESSGGHHHHHHHSS
T ss_pred HHHHHHHHhcC----CC-EEEEEccCHHHHHHHHhCc
Confidence 5555554411 23 3789999999999998876
No 296
>PRK11587 putative phosphatase; Provisional
Probab=70.71 E-value=15 Score=35.92 Aligned_cols=92 Identities=15% Similarity=0.247 Sum_probs=54.0
Q ss_pred chhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhccCh--hHHHHHH
Q psy12533 113 QNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKP--QEFKISC 190 (567)
Q Consensus 113 h~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GPlllsp~~l~~al~REvi~k~p--~~fKi~~ 190 (567)
-+|+.++...++++||++..+|+.+... ++..+.. .+++.=..+.+.+ ++...+| +.|..++
T Consensus 85 ~pg~~e~L~~L~~~g~~~~ivTn~~~~~---~~~~l~~-----~~l~~~~~i~~~~--------~~~~~KP~p~~~~~~~ 148 (218)
T PRK11587 85 LPGAIALLNHLNKLGIPWAIVTSGSVPV---ASARHKA-----AGLPAPEVFVTAE--------RVKRGKPEPDAYLLGA 148 (218)
T ss_pred CcCHHHHHHHHHHcCCcEEEEcCCCchH---HHHHHHh-----cCCCCccEEEEHH--------HhcCCCCCcHHHHHHH
Confidence 3699999999999999999999976543 2333433 2232101122211 2223344 4444333
Q ss_pred HHHHHHhCCCCCCCEEEecCCcccchhhhhhcCCCC
Q psy12533 191 LRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPL 226 (567)
Q Consensus 191 L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~ 226 (567)
+.+ .+ .+ .. ..-+|++..|+.+=+++|+..
T Consensus 149 -~~~-g~-~p-~~--~l~igDs~~di~aA~~aG~~~ 178 (218)
T PRK11587 149 -QLL-GL-AP-QE--CVVVEDAPAGVLSGLAAGCHV 178 (218)
T ss_pred -HHc-CC-Cc-cc--EEEEecchhhhHHHHHCCCEE
Confidence 211 11 11 12 456899999999999999963
No 297
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=70.31 E-value=17 Score=42.96 Aligned_cols=102 Identities=17% Similarity=0.223 Sum_probs=66.6
Q ss_pred cCCcchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhh-----hhh----hh--
Q psy12533 384 KDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLN-----AFH----TE-- 452 (567)
Q Consensus 384 kDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GPvl~spd~l~~-----al~----rE-- 452 (567)
.|..++++.+..+.+++.|.+++-+||....-|...-+ . .++.+. + ++.+.+.. .+. .|
T Consensus 440 ~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~---~-----lGI~~~-~-~~~~~l~~~~~~~~~~~~~~~~~~ 509 (755)
T TIGR01647 440 FDPPRHDTKETIERARHLGVEVKMVTGDHLAIAKETAR---R-----LGLGTN-I-YTADVLLKGDNRDDLPSGELGEMV 509 (755)
T ss_pred cCCChhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHH---H-----cCCCCC-C-cCHHHhcCCcchhhCCHHHHHHHH
Confidence 79999999999999999999999999987766633333 3 555431 1 11111100 000 01
Q ss_pred ----hhcc-ChhHHHHHHHHHHHhhCCCCCCCEEEecCCCcccHHhHHHc--CCCC
Q psy12533 453 ----VIEK-KPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAV--GIPL 501 (567)
Q Consensus 453 ----vi~k-~p~~fK~~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~v--GIp~ 501 (567)
|..+ .| +-|..+.+.++. .+ -.+|--|+-.||+-|-+++ ||..
T Consensus 510 ~~~~vfAr~~P-e~K~~iV~~lq~----~G-~~VamvGDGvNDapAL~~AdVGIAm 559 (755)
T TIGR01647 510 EDADGFAEVFP-EHKYEIVEILQK----RG-HLVGMTGDGVNDAPALKKADVGIAV 559 (755)
T ss_pred HhCCEEEecCH-HHHHHHHHHHHh----cC-CEEEEEcCCcccHHHHHhCCeeEEe
Confidence 1122 34 459999999987 23 3478889999998888875 6654
No 298
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=70.16 E-value=17 Score=43.77 Aligned_cols=101 Identities=11% Similarity=0.115 Sum_probs=68.0
Q ss_pred cCCcchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhh----------hh
Q psy12533 384 KDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHT----------EV 453 (567)
Q Consensus 384 kDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GPvl~spd~l~~al~r----------Ev 453 (567)
.|..++++.+..+.+++.|.+++-+||-...-|.. .-+. .++..+.++.-.+ +..+.. +|
T Consensus 513 ~Dp~R~~~~~aI~~l~~aGI~vvmiTGD~~~tA~a---IA~~-----lGI~~~~v~~g~~--l~~~~~~el~~~~~~~~v 582 (867)
T TIGR01524 513 LDPPKESTKEAIAALFKNGINVKVLTGDNEIVTAR---ICQE-----VGIDANDFLLGAD--IEELSDEELARELRKYHI 582 (867)
T ss_pred eCCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHH---HHHH-----cCCCCCCeeecHh--hhhCCHHHHHHHhhhCeE
Confidence 69999999999999999999999999976554432 2223 5555444543221 111111 22
Q ss_pred hccChhHHHHHHHHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCC
Q psy12533 454 IEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGI 499 (567)
Q Consensus 454 i~k~p~~fK~~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGI 499 (567)
..+-.-+-|.++.+.++. .+ -.+|..|+-.||+-|-+++.|
T Consensus 583 fAr~~Pe~K~~iV~~lq~----~G-~vVam~GDGvNDapALk~AdV 623 (867)
T TIGR01524 583 FARLTPMQKSRIIGLLKK----AG-HTVGFLGDGINDAPALRKADV 623 (867)
T ss_pred EEECCHHHHHHHHHHHHh----CC-CEEEEECCCcccHHHHHhCCE
Confidence 223334679999999887 23 357899999999999888633
No 299
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=70.00 E-value=18 Score=43.63 Aligned_cols=101 Identities=18% Similarity=0.272 Sum_probs=67.3
Q ss_pred cCCcchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCC--CceecCCCchhhhhhh----------
Q psy12533 384 KDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPE--GPMLLNPTSLLNAFHT---------- 451 (567)
Q Consensus 384 kDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~--GPvl~spd~l~~al~r---------- 451 (567)
.|..++|+.+....+++.|+++.-+|+....-|...-. . .++.. +.++. .+.+ ..+..
T Consensus 526 ~Dp~r~~~~~~i~~l~~~Gi~v~miTGD~~~tA~~ia~---~-----~Gi~~~~~~~v~-g~~l-~~~~~~~l~~~~~~~ 595 (884)
T TIGR01522 526 NDPPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIAR---R-----LGMPSKTSQSVS-GEKL-DAMDDQQLSQIVPKV 595 (884)
T ss_pred cCcchhHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHH---H-----cCCCCCCCceeE-hHHh-HhCCHHHHHHHhhcC
Confidence 68999999999999999999999999987766644433 3 33321 11211 1111 11111
Q ss_pred hhhccChhHHHHHHHHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCC
Q psy12533 452 EVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGI 499 (567)
Q Consensus 452 Evi~k~p~~fK~~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGI 499 (567)
.|..+-..+-|..+++.++.. + -.++..|+-.||+-|-++++|
T Consensus 596 ~Vfar~~P~~K~~iv~~lq~~----g-~~v~mvGDGvND~pAl~~AdV 638 (884)
T TIGR01522 596 AVFARASPEHKMKIVKALQKR----G-DVVAMTGDGVNDAPALKLADI 638 (884)
T ss_pred eEEEECCHHHHHHHHHHHHHC----C-CEEEEECCCcccHHHHHhCCe
Confidence 122222246788888888872 2 347889999999999999865
No 300
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=69.89 E-value=12 Score=42.29 Aligned_cols=87 Identities=18% Similarity=0.231 Sum_probs=63.6
Q ss_pred cccccchhHHHHHHHHHHCCc-eEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhccChhHH
Q psy12533 108 GKDWAQNGVTRLFTKIKENGY-KLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEF 186 (567)
Q Consensus 108 GkDwth~GVa~Ly~~i~~nGY-~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GPlllsp~~l~~al~REvi~k~p~~f 186 (567)
-+|-..+|+.++.+.+++.|+ ++.-+|+.+.. .++..++. .+++ ..|. ++ .| +-
T Consensus 359 ~~d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~---~a~~i~~~-----lgi~---------~~f~----~~---~p-~~ 413 (536)
T TIGR01512 359 LSDEPRPDAAEAIAELKALGIEKVVMLTGDRRA---VAERVARE-----LGID---------EVHA----EL---LP-ED 413 (536)
T ss_pred EeccchHHHHHHHHHHHHcCCCcEEEEcCCCHH---HHHHHHHH-----cCCh---------hhhh----cc---Cc-HH
Confidence 367789999999999999999 99999997654 44666666 4443 1221 11 12 23
Q ss_pred HHHHHHHHHHhCCCCCCCEEEecCCcccchhhhhhcCC
Q psy12533 187 KISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGI 224 (567)
Q Consensus 187 Ki~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGI 224 (567)
|.+.++.++.. .. -++.+|+..+|+.|-+++|+
T Consensus 414 K~~~i~~l~~~----~~-~v~~vGDg~nD~~al~~A~v 446 (536)
T TIGR01512 414 KLEIVKELREK----YG-PVAMVGDGINDAPALAAADV 446 (536)
T ss_pred HHHHHHHHHhc----CC-EEEEEeCCHHHHHHHHhCCE
Confidence 77788887764 22 37889999999999999996
No 301
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=69.82 E-value=9 Score=37.36 Aligned_cols=54 Identities=20% Similarity=0.108 Sum_probs=42.8
Q ss_pred EeeeCCCeEEEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHCCc--eEEEEccCcccc
Q psy12533 352 FKWRWNDKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGY--KLLYLSARAIGQ 415 (567)
Q Consensus 352 ylw~~~~kiVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~nGY--~iiYLSaRpi~q 415 (567)
.|-..+=|.||+|.|.|||.- +++-.++-+.+-++++++.|- +|+-+|.-+...
T Consensus 35 ~Lk~~Gik~li~DkDNTL~~~----------~~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~ 90 (168)
T PF09419_consen 35 HLKKKGIKALIFDKDNTLTPP----------YEDEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSS 90 (168)
T ss_pred hhhhcCceEEEEcCCCCCCCC----------CcCcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcc
Confidence 355667789999999999976 366678889999999998865 589899876443
No 302
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=69.81 E-value=24 Score=41.70 Aligned_cols=101 Identities=18% Similarity=0.248 Sum_probs=69.1
Q ss_pred eEEEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCce
Q psy12533 359 KIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPM 438 (567)
Q Consensus 359 kiVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GPv 438 (567)
.+|.+-+||++ +|.+. =+|..++|+.+..+.++++|+++.-||+....-+ +...+. .++. .
T Consensus 549 ~~v~va~~~~~-----~g~i~---l~d~~r~~a~~~i~~L~~~gi~~~llTGd~~~~a---~~ia~~-----lgi~---~ 609 (741)
T PRK11033 549 TVVLVLRNDDV-----LGLIA---LQDTLRADARQAISELKALGIKGVMLTGDNPRAA---AAIAGE-----LGID---F 609 (741)
T ss_pred EEEEEEECCEE-----EEEEE---EecCCchhHHHHHHHHHHCCCEEEEEcCCCHHHH---HHHHHH-----cCCC---e
Confidence 44555556543 23331 2688999999999999999999999999866555 444445 4443 1
Q ss_pred ecCCCchhhhhhhhhhccChhHHHHHHHHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCC
Q psy12533 439 LLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGI 499 (567)
Q Consensus 439 l~spd~l~~al~rEvi~k~p~~fK~~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGI 499 (567)
. + .-.|+ -|.++++.++. .. . ++-.|+..||+.|-++++|
T Consensus 610 ~------~--------~~~p~-~K~~~v~~l~~----~~-~-v~mvGDgiNDapAl~~A~v 649 (741)
T PRK11033 610 R------A--------GLLPE-DKVKAVTELNQ----HA-P-LAMVGDGINDAPAMKAASI 649 (741)
T ss_pred e------c--------CCCHH-HHHHHHHHHhc----CC-C-EEEEECCHHhHHHHHhCCe
Confidence 1 1 11344 48888888875 23 2 6778888999999988754
No 303
>PRK13599 putative peroxiredoxin; Provisional
Probab=69.67 E-value=27 Score=34.97 Aligned_cols=77 Identities=18% Similarity=0.245 Sum_probs=45.3
Q ss_pred EecCCcccc-CCccccc--cccccccccch------hHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccC-Ccc
Q psy12533 88 SDIDGTITK-SDVLGHV--LPIMGKDWAQN------GVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQE-DLT 157 (567)
Q Consensus 88 SDIDGTITk-SD~lG~i--l~~lGkDwth~------GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~-~~~ 157 (567)
-+.+|.+.. ++..|.. +-..-.+||-. ..++++.++++.|.+++-+|.-+. ...+.|.+.+++. ++.
T Consensus 14 ~t~~G~~~~~~~~~Gk~vVL~~~pa~~tpvCt~El~~l~~~~~~f~~~gv~vigIS~D~~---~~~~~w~~~i~~~~~~~ 90 (215)
T PRK13599 14 VTTQGVKRLPEDYAGKWFVLFSHPADFTPVCTTEFVEFARKANDFKELNTELIGLSVDQV---FSHIKWVEWIKDNTNIA 90 (215)
T ss_pred ECCCCcEecHHHHCCCeEEEEEeCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEeCCCH---HHHHHHHHhHHHhcCCC
Confidence 345555444 3445542 22233555543 778899999999999999997543 3345566655543 344
Q ss_pred CCCCceecCCC
Q psy12533 158 LPEGPMLLNPT 168 (567)
Q Consensus 158 LP~GPlllsp~ 168 (567)
+| =|++..++
T Consensus 91 i~-fPil~D~~ 100 (215)
T PRK13599 91 IP-FPVIADDL 100 (215)
T ss_pred Cc-eeEEECCC
Confidence 44 24665554
No 304
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=69.65 E-value=15 Score=33.89 Aligned_cols=89 Identities=17% Similarity=0.252 Sum_probs=52.9
Q ss_pred cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccC---CCCceecCCCchhhhhhhhhhccC--hhHH
Q psy12533 387 AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTL---PEGPMLLNPTSLLNAFHTEVIEKK--PQEF 461 (567)
Q Consensus 387 ~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~l---P~GPvl~spd~l~~al~rEvi~k~--p~~f 461 (567)
..||+.++.+.++++||++.-+|+.+... . ..+.. .+| .+ .++++ .++...+ |+.|
T Consensus 86 ~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~---~~~~~-----~~l~~~f~-~i~~~---------~~~~~~KP~~~~~ 146 (183)
T TIGR01509 86 PLPGVEPLLEALRARGKKLALLTNSPRDH-A---VLVQE-----LGLRDLFD-VVIFS---------GDVGRGKPDPDIY 146 (183)
T ss_pred cCcCHHHHHHHHHHCCCeEEEEeCCchHH-H---HHHHh-----cCCHHHCC-EEEEc---------CCCCCCCCCHHHH
Confidence 45899999999999999999999876544 1 22222 122 11 12221 1233344 4566
Q ss_pred HHHHHHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCC
Q psy12533 462 KISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIP 500 (567)
Q Consensus 462 K~~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp 500 (567)
+..+ +.+ +-.... ..-+|++..|+.+=+++|+.
T Consensus 147 ~~~~-~~~----~~~~~~-~~~vgD~~~di~aA~~~G~~ 179 (183)
T TIGR01509 147 LLAL-KKL----GLKPEE-CLFVDDSPAGIEAAKAAGMH 179 (183)
T ss_pred HHHH-HHc----CCCcce-EEEEcCCHHHHHHHHHcCCE
Confidence 5432 222 111112 23579999999999999985
No 305
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=69.60 E-value=12 Score=35.77 Aligned_cols=67 Identities=7% Similarity=0.086 Sum_probs=47.1
Q ss_pred CCCeEEEEecCCccccCCccccccc--------------------ccC-c-CC--cchhHHHHHHHHHHCCceEEEEccC
Q psy12533 356 WNDKIVISDIDGTITKSDVLGHVLP--------------------IMG-K-DW--AQNGVTRLFTKIKENGYKLLYLSAR 411 (567)
Q Consensus 356 ~~~kiVIsDIDGTiTkSD~~G~~~~--------------------~~G-k-Dw--~h~Gva~l~~~i~~nGY~iiYLSaR 411 (567)
...+++|.|+|.|+-.|-.....-. .++ . .+ .+||+.++...++++ |.+.-.|+-
T Consensus 4 ~~kl~LVLDLDeTLihs~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~v~~rPgv~efL~~l~~~-yel~I~T~~ 82 (156)
T TIGR02250 4 EKKLHLVLDLDQTLIHTTKDPTLSEWEKYDIEEPNSETRRDLRKFNLGTMWYLTKLRPFLHEFLKEASKL-YEMHVYTMG 82 (156)
T ss_pred CCceEEEEeCCCCcccccccCccchhhhcccccCCccccccceEEEcCCeEEEEEECCCHHHHHHHHHhh-cEEEEEeCC
Confidence 4567799999999998866432110 011 1 11 489999999999966 999999998
Q ss_pred cccchHHHHHHH
Q psy12533 412 AIGQSRVTREYL 423 (567)
Q Consensus 412 pi~qa~~Tr~~L 423 (567)
+...|+..-+.|
T Consensus 83 ~~~yA~~vl~~l 94 (156)
T TIGR02250 83 TRAYAQAIAKLI 94 (156)
T ss_pred cHHHHHHHHHHh
Confidence 877776555544
No 306
>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]
Probab=69.52 E-value=8.7 Score=40.08 Aligned_cols=54 Identities=17% Similarity=0.305 Sum_probs=38.5
Q ss_pred eeCCCeEEEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHCCc-eEEEEccCcc
Q psy12533 354 WRWNDKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGY-KLLYLSARAI 413 (567)
Q Consensus 354 w~~~~kiVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~nGY-~iiYLSaRpi 413 (567)
-+...+.+++|.|||+|-. .+.--..++-++..++.+++....= -+..+|+|+.
T Consensus 14 ~~a~~~~~~lDyDGTl~~i------~~~p~~a~~~~~l~~lL~~Las~~~~~v~iiSGR~~ 68 (266)
T COG1877 14 LNARKRLLFLDYDGTLTEI------VPHPEAAVPDDRLLSLLQDLASDPRNVVAIISGRSL 68 (266)
T ss_pred ccccceEEEEecccccccc------ccCccccCCCHHHHHHHHHHHhcCCCeEEEEeCCCH
Confidence 4566788999999999865 2222233566789999999998844 3556788864
No 307
>PRK13190 putative peroxiredoxin; Provisional
Probab=69.44 E-value=12 Score=36.92 Aligned_cols=76 Identities=21% Similarity=0.321 Sum_probs=44.1
Q ss_pred ecCCccccCCccccc--ccccCcCCc------chhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccC-CccCC
Q psy12533 364 DIDGTITKSDVLGHV--LPIMGKDWA------QNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQE-DLTLP 434 (567)
Q Consensus 364 DIDGTiTkSD~~G~~--~~~~GkDw~------h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~-~~~lP 434 (567)
|.+|+++.+|..|.. +-..-.+|+ -+..++++.+++++|.+++-+|.-+. ..-++|++.+.+. |..+|
T Consensus 15 ~~~g~v~l~d~~gk~vvL~~~p~~~cp~C~~El~~l~~~~~~f~~~~~~vi~vS~D~~---~~~~~w~~~~~~~~g~~~~ 91 (202)
T PRK13190 15 TTKGPIDLSKYKGKWVLLFSHPADFTPVCTTEFIAFSRRYEDFKKLGVELVGLSVDSI---YSHIAWLRDIEERFGIKIP 91 (202)
T ss_pred cCCCcEeHHHhCCCEEEEEEEcCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCCH---HHHHHHHHhHHHhcCCCce
Confidence 345666666665642 111234443 34677888899999999999997543 2235676654432 33333
Q ss_pred CCceecCCC
Q psy12533 435 EGPMLLNPT 443 (567)
Q Consensus 435 ~GPvl~spd 443 (567)
=|++..++
T Consensus 92 -fPll~D~~ 99 (202)
T PRK13190 92 -FPVIADID 99 (202)
T ss_pred -EEEEECCC
Confidence 35665553
No 308
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=68.92 E-value=13 Score=35.73 Aligned_cols=94 Identities=11% Similarity=0.192 Sum_probs=50.9
Q ss_pred chhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhh--ccChhHHHHHH
Q psy12533 113 QNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVI--EKKPQEFKISC 190 (567)
Q Consensus 113 h~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GPlllsp~~l~~al~REvi--~k~p~~fKi~~ 190 (567)
.+|+.++.+.++++||++.-+|..+.... ..++.....-..-+- -++.+. ++. .++|+.|...+
T Consensus 86 ~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~---~~~~~~~~~l~~~fd--~v~~s~---------~~~~~KP~p~~~~~~~ 151 (199)
T PRK09456 86 RPEVIAIMHKLREQGHRVVVLSNTNRLHT---TFWPEEYPEVRAAAD--HIYLSQ---------DLGMRKPEARIYQHVL 151 (199)
T ss_pred CHHHHHHHHHHHhCCCcEEEEcCCchhhH---HHHHhhchhHHHhcC--EEEEec---------ccCCCCCCHHHHHHHH
Confidence 46889999999999999999998764332 122211000000010 122221 222 33444454332
Q ss_pred HHHHHHhCCCCCCCEEEecCCcccchhhhhhcCCCC
Q psy12533 191 LRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPL 226 (567)
Q Consensus 191 L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~ 226 (567)
+.+ .+ ++ .. ..-+|++..|+.+=+++|+..
T Consensus 152 -~~~-~~-~p-~~--~l~vgD~~~di~aA~~aG~~~ 181 (199)
T PRK09456 152 -QAE-GF-SA-AD--AVFFDDNADNIEAANALGITS 181 (199)
T ss_pred -HHc-CC-Ch-hH--eEEeCCCHHHHHHHHHcCCEE
Confidence 222 11 11 11 335678899999999999965
No 309
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=68.79 E-value=6.5 Score=37.94 Aligned_cols=98 Identities=9% Similarity=0.166 Sum_probs=53.3
Q ss_pred cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhccChhHHHHHHH
Q psy12533 387 AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCL 466 (567)
Q Consensus 387 ~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GPvl~spd~l~~al~rEvi~k~p~~fK~~~L 466 (567)
..||+.++.+.++++||++.-+|+-+...... ...+.... -...| + .++.+.+ -....+.|+.|+..+
T Consensus 95 ~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~-~~~~~~~~-l~~~f-d-~v~~s~~-------~~~~KP~p~~~~~~~- 162 (211)
T TIGR02247 95 LRPSMMAAIKTLRAKGFKTACITNNFPTDHSA-EEALLPGD-IMALF-D-AVVESCL-------EGLRKPDPRIYQLML- 162 (211)
T ss_pred cChhHHHHHHHHHHCCCeEEEEeCCCCccchh-hhHhhhhh-hHhhC-C-EEEEeee-------cCCCCCCHHHHHHHH-
Confidence 47899999999999999999999865432211 11111100 00011 1 1222111 011234556776543
Q ss_pred HHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCCC
Q psy12533 467 RDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPL 501 (567)
Q Consensus 467 ~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~ 501 (567)
+.+. + .+ ..-++ +|++..|+.+=+++|+..
T Consensus 163 ~~~g-~-~~-~~~l~--i~D~~~di~aA~~aG~~~ 192 (211)
T TIGR02247 163 ERLG-V-AP-EECVF--LDDLGSNLKPAAALGITT 192 (211)
T ss_pred HHcC-C-CH-HHeEE--EcCCHHHHHHHHHcCCEE
Confidence 2221 1 11 22233 589999999999999954
No 310
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=68.01 E-value=14 Score=45.11 Aligned_cols=111 Identities=15% Similarity=0.223 Sum_probs=68.8
Q ss_pred ccccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCC---------ccCC-------C--CceecCCCch
Q psy12533 109 KDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQED---------LTLP-------E--GPMLLNPTSL 170 (567)
Q Consensus 109 kDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~---------~~LP-------~--GPlllsp~~l 170 (567)
.|-.+++|.+..++++++|.+++-+|+|+.-.+.....=+.-+..+. ..++ + ..++ +...+
T Consensus 566 ~Dplr~~v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~vi-~G~~l 644 (997)
T TIGR01106 566 IDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETVEDIAARLNIPVSQVNPRDAKACVV-HGSDL 644 (997)
T ss_pred cCCChHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCccchhhhhhhccccccccccccccceEE-EhHHh
Confidence 68889999999999999999999999998877644433322211100 0000 0 0121 11111
Q ss_pred --------hhhhhh--h-hhccChhHHHHHHHHHHHHhCCCCCCCEEEecCCcccchhhhhhc--CCC
Q psy12533 171 --------LNAFHT--E-VIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAV--GIP 225 (567)
Q Consensus 171 --------~~al~R--E-vi~k~p~~fKi~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~v--GIp 225 (567)
-..+.+ . |..+-.-+.|..+.+.++.. + -.++..|+..+|+-|-+++ ||.
T Consensus 645 ~~l~~~el~~~~~~~~~~VfaR~sPeqK~~IV~~lq~~----g-~vv~~~GDG~ND~paLk~AdVGia 707 (997)
T TIGR01106 645 KDMTSEQLDEILKYHTEIVFARTSPQQKLIIVEGCQRQ----G-AIVAVTGDGVNDSPALKKADIGVA 707 (997)
T ss_pred hhCCHHHHHHHHHhcCCEEEEECCHHHHHHHHHHHHHC----C-CEEEEECCCcccHHHHhhCCccee
Confidence 111110 0 33443446799998888875 2 3689999999999998874 663
No 311
>cd02964 TryX_like_family Tryparedoxin (TryX)-like family; composed of TryX and related proteins including nucleoredoxin (NRX), rod-derived cone viability factor (RdCVF) and the nematode homolog described as a 16-kD class of TRX. Most members of this family, except RdCVF, are protein disulfide oxidoreductases containing an active site CXXC motif, similar to TRX.
Probab=67.91 E-value=45 Score=29.97 Aligned_cols=59 Identities=19% Similarity=0.466 Sum_probs=38.2
Q ss_pred cCCc--cccCCccccc-cccccccccch------hHHHHHHHHHHC--CceEEEEccCcccchHHHHHHHHh
Q psy12533 90 IDGT--ITKSDVLGHV-LPIMGKDWAQN------GVTRLFTKIKEN--GYKLLYLSARAIGQSRVTREYLQS 150 (567)
Q Consensus 90 IDGT--ITkSD~lG~i-l~~lGkDwth~------GVa~Ly~~i~~n--GY~ilYLSaRpi~~a~~Tr~~L~~ 150 (567)
+||| ++-++..|.+ +-.+...|..+ -+.++++++++. +..|+++|..+. .+..+.|++.
T Consensus 4 ~~~~~~v~l~~~~Gk~vll~F~atwC~~C~~~~p~l~~l~~~~~~~~~~v~vi~Vs~d~~--~~~~~~~~~~ 73 (132)
T cd02964 4 LDGEGVVPVSALEGKTVGLYFSASWCPPCRAFTPKLVEFYEKLKEEGKNFEIVFVSRDRS--EESFNEYFSE 73 (132)
T ss_pred ccCCccccHHHhCCCEEEEEEECCCCchHHHHHHHHHHHHHHHhhcCCCeEEEEEecCCC--HHHHHHHHhc
Confidence 5665 5556666755 33445566555 344677778775 788999987653 3566778776
No 312
>KOG1615|consensus
Probab=67.59 E-value=13 Score=37.53 Aligned_cols=122 Identities=17% Similarity=0.230 Sum_probs=79.4
Q ss_pred cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCC-----CceecCCCchhhhhhh-hhhccChhH
Q psy12533 387 AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPE-----GPMLLNPTSLLNAFHT-EVIEKKPQE 460 (567)
Q Consensus 387 ~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~-----GPvl~spd~l~~al~r-Evi~k~p~~ 460 (567)
.-|||-+|+++++++|-++.-+|+-=+.++.-+.+-| ++|. --+++.-++-|..|.. |.+.. --
T Consensus 89 lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~L--------gi~~~n~yAN~l~fd~~Gk~~gfd~~~ptsd--sg 158 (227)
T KOG1615|consen 89 LTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQL--------GIPKSNIYANELLFDKDGKYLGFDTNEPTSD--SG 158 (227)
T ss_pred cCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHh--------CCcHhhhhhheeeeccCCcccccccCCcccc--CC
Confidence 5689999999999999999999998777776666533 4443 2344455555543321 11110 12
Q ss_pred HHHHHHHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCCCCCEEEEcCCCcccccccccccccHhh
Q psy12533 461 FKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLSRIFTINSRGEVKHEMTQTFQSTYSN 527 (567)
Q Consensus 461 fK~~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~~rIF~In~~g~~~~~~~~~~~~sY~~ 527 (567)
=|.+.|..|+.-++ +.- .+..|+-.||..|- |+..-| |+.-|.+..+..+....+|..
T Consensus 159 gKa~~i~~lrk~~~--~~~-~~mvGDGatDlea~-----~pa~af-i~~~g~~~r~~vk~nak~~~~ 216 (227)
T KOG1615|consen 159 GKAEVIALLRKNYN--YKT-IVMVGDGATDLEAM-----PPADAF-IGFGGNVIREGVKANAKWYVT 216 (227)
T ss_pred ccHHHHHHHHhCCC--hhe-eEEecCCccccccC-----Cchhhh-hccCCceEcHhhHhccHHHHH
Confidence 37788888887333 222 56889999999874 555445 466677776666666677743
No 313
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=67.51 E-value=18 Score=33.46 Aligned_cols=88 Identities=17% Similarity=0.229 Sum_probs=50.9
Q ss_pred chhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccC---CCCceecCCCchhhhhhhhhhccCh--hHHH
Q psy12533 113 QNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTL---PEGPMLLNPTSLLNAFHTEVIEKKP--QEFK 187 (567)
Q Consensus 113 h~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~L---P~GPlllsp~~l~~al~REvi~k~p--~~fK 187 (567)
.+|+.++.+.++++||++.-+|+.+... ...+.. .+| .. .++.+ .++...+| +.|+
T Consensus 87 ~~g~~~~l~~l~~~g~~~~i~Tn~~~~~----~~~~~~-----~~l~~~f~-~i~~~---------~~~~~~KP~~~~~~ 147 (183)
T TIGR01509 87 LPGVEPLLEALRARGKKLALLTNSPRDH----AVLVQE-----LGLRDLFD-VVIFS---------GDVGRGKPDPDIYL 147 (183)
T ss_pred CcCHHHHHHHHHHCCCeEEEEeCCchHH----HHHHHh-----cCCHHHCC-EEEEc---------CCCCCCCCCHHHHH
Confidence 4789999999999999999999876543 222222 122 11 12222 13334454 3344
Q ss_pred HHHHHHHHHhCCCCCCCEEEecCCcccchhhhhhcCCC
Q psy12533 188 ISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIP 225 (567)
Q Consensus 188 i~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp 225 (567)
..+ ..+.-...- ..-+|++..|+.+=+++|+.
T Consensus 148 ~~~-----~~~~~~~~~-~~~vgD~~~di~aA~~~G~~ 179 (183)
T TIGR01509 148 LAL-----KKLGLKPEE-CLFVDDSPAGIEAAKAAGMH 179 (183)
T ss_pred HHH-----HHcCCCcce-EEEEcCCHHHHHHHHHcCCE
Confidence 332 222211112 34578889999999999985
No 314
>PTZ00256 glutathione peroxidase; Provisional
Probab=66.97 E-value=42 Score=32.31 Aligned_cols=63 Identities=21% Similarity=0.336 Sum_probs=39.7
Q ss_pred EEecCC-ccccCCccccc-cccc-cccccc------hhHHHHHHHHHHCCceEEEEccCc-c----cchHHHHHHHH
Q psy12533 87 ISDIDG-TITKSDVLGHV-LPIM-GKDWAQ------NGVTRLFTKIKENGYKLLYLSARA-I----GQSRVTREYLQ 149 (567)
Q Consensus 87 ISDIDG-TITkSD~lG~i-l~~l-GkDwth------~GVa~Ly~~i~~nGY~ilYLSaRp-i----~~a~~Tr~~L~ 149 (567)
.-|.|| +++-|+..|.. +-.+ -..|.- +...+++++++++|..|+-+|... . ...+..+.|+.
T Consensus 25 l~d~~G~~vsLs~~~Gk~vvlv~n~atwCp~C~~e~p~l~~l~~~~~~~gv~vv~vs~~~~~~~~~~~~~~~~~f~~ 101 (183)
T PTZ00256 25 AIDIDGQLVQLSKFKGKKAIIVVNVACKCGLTSDHYTQLVELYKQYKSQGLEILAFPCNQFMEQEPWDEPEIKEYVQ 101 (183)
T ss_pred eEcCCCCEEeHHHhCCCcEEEEEEECCCCCchHHHHHHHHHHHHHHhhCCcEEEEEecccccccCCCCHHHHHHHHH
Confidence 336777 56777777863 1111 244543 366789999999999999998532 1 12356677764
No 315
>PRK13599 putative peroxiredoxin; Provisional
Probab=66.69 E-value=29 Score=34.78 Aligned_cols=52 Identities=17% Similarity=0.252 Sum_probs=33.9
Q ss_pred chhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccC-CccCCCCceecCCC
Q psy12533 388 QNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQE-DLTLPEGPMLLNPT 443 (567)
Q Consensus 388 h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~-~~~lP~GPvl~spd 443 (567)
.+..++++.++++.|.+++-+|.-..- ..+.|.+.+++. ++.+| =|++..++
T Consensus 48 l~~l~~~~~~f~~~gv~vigIS~D~~~---~~~~w~~~i~~~~~~~i~-fPil~D~~ 100 (215)
T PRK13599 48 FVEFARKANDFKELNTELIGLSVDQVF---SHIKWVEWIKDNTNIAIP-FPVIADDL 100 (215)
T ss_pred HHHHHHHHHHHHHCCCEEEEEeCCCHH---HHHHHHHhHHHhcCCCCc-eeEEECCC
Confidence 347788999999999999999976532 335566555542 33443 24565443
No 316
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=66.54 E-value=17 Score=34.91 Aligned_cols=96 Identities=13% Similarity=0.210 Sum_probs=54.2
Q ss_pred chhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhccChhHHHHHHHH
Q psy12533 388 QNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLR 467 (567)
Q Consensus 388 h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GPvl~spd~l~~al~rEvi~k~p~~fK~~~L~ 467 (567)
.||+.++.+.++++||++.-+|..+.... ..++.....-...|. -++.+.+ . ..-.++|+.|... ++
T Consensus 86 ~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~---~~~~~~~~~l~~~fd--~v~~s~~-~------~~~KP~p~~~~~~-~~ 152 (199)
T PRK09456 86 RPEVIAIMHKLREQGHRVVVLSNTNRLHT---TFWPEEYPEVRAAAD--HIYLSQD-L------GMRKPEARIYQHV-LQ 152 (199)
T ss_pred CHHHHHHHHHHHhCCCcEEEEcCCchhhH---HHHHhhchhHHHhcC--EEEEecc-c------CCCCCCHHHHHHH-HH
Confidence 68999999999999999999999764332 222211000000111 1222221 1 1124455777644 33
Q ss_pred HHHhhCCCCCCCEEEecCCCcccHHhHHHcCCCC
Q psy12533 468 DIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPL 501 (567)
Q Consensus 468 ~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~ 501 (567)
.+. + ++ ... .-+|++..|+.+=+++|+..
T Consensus 153 ~~~-~-~p-~~~--l~vgD~~~di~aA~~aG~~~ 181 (199)
T PRK09456 153 AEG-F-SA-ADA--VFFDDNADNIEAANALGITS 181 (199)
T ss_pred HcC-C-Ch-hHe--EEeCCCHHHHHHHHHcCCEE
Confidence 321 1 11 222 35688999999999999965
No 317
>cd02964 TryX_like_family Tryparedoxin (TryX)-like family; composed of TryX and related proteins including nucleoredoxin (NRX), rod-derived cone viability factor (RdCVF) and the nematode homolog described as a 16-kD class of TRX. Most members of this family, except RdCVF, are protein disulfide oxidoreductases containing an active site CXXC motif, similar to TRX.
Probab=66.42 E-value=46 Score=29.92 Aligned_cols=59 Identities=19% Similarity=0.466 Sum_probs=37.5
Q ss_pred cCCc--cccCCccccc-ccccCcCCcch------hHHHHHHHHHHC--CceEEEEccCcccchHHHHHHHHh
Q psy12533 365 IDGT--ITKSDVLGHV-LPIMGKDWAQN------GVTRLFTKIKEN--GYKLLYLSARAIGQSRVTREYLQS 425 (567)
Q Consensus 365 IDGT--iTkSD~~G~~-~~~~GkDw~h~------Gva~l~~~i~~n--GY~iiYLSaRpi~qa~~Tr~~L~~ 425 (567)
+||| ++-++..|.+ +-.....|..+ -+.++++++++. +..|++++..+. ....+.|++.
T Consensus 4 ~~~~~~v~l~~~~Gk~vll~F~atwC~~C~~~~p~l~~l~~~~~~~~~~v~vi~Vs~d~~--~~~~~~~~~~ 73 (132)
T cd02964 4 LDGEGVVPVSALEGKTVGLYFSASWCPPCRAFTPKLVEFYEKLKEEGKNFEIVFVSRDRS--EESFNEYFSE 73 (132)
T ss_pred ccCCccccHHHhCCCEEEEEEECCCCchHHHHHHHHHHHHHHHhhcCCCeEEEEEecCCC--HHHHHHHHhc
Confidence 4555 5556666654 33344556433 445677788775 789999987654 3566777776
No 318
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=66.23 E-value=18 Score=39.61 Aligned_cols=92 Identities=11% Similarity=0.156 Sum_probs=57.8
Q ss_pred chhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCC--CceecCCCchhhhhhhhhhccChhHHHHHH
Q psy12533 388 QNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPE--GPMLLNPTSLLNAFHTEVIEKKPQEFKISC 465 (567)
Q Consensus 388 h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~--GPvl~spd~l~~al~rEvi~k~p~~fK~~~ 465 (567)
-+|+.+++..++++||++--+|+++.-.. +..|+. .+|.+ -.++.+.+.. ...++|+.|..++
T Consensus 218 ~pGa~ElL~~Lk~~GiklaIaSn~~~~~~---~~~L~~-----lgL~~yFd~Iv~sddv~-------~~KP~Peifl~A~ 282 (381)
T PLN02575 218 RTGSQEFVNVLMNYKIPMALVSTRPRKTL---ENAIGS-----IGIRGFFSVIVAAEDVY-------RGKPDPEMFIYAA 282 (381)
T ss_pred CcCHHHHHHHHHHCCCeEEEEeCCCHHHH---HHHHHH-----cCCHHHceEEEecCcCC-------CCCCCHHHHHHHH
Confidence 47999999999999999999999875444 555555 33321 1122222210 1234556666443
Q ss_pred HHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCC
Q psy12533 466 LRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIP 500 (567)
Q Consensus 466 L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp 500 (567)
+.+. + .+ .. ...||++.+|+.|=+++|+.
T Consensus 283 -~~lg-l-~P-ee--cl~IGDS~~DIeAAk~AGm~ 311 (381)
T PLN02575 283 -QLLN-F-IP-ER--CIVFGNSNQTVEAAHDARMK 311 (381)
T ss_pred -HHcC-C-Cc-cc--EEEEcCCHHHHHHHHHcCCE
Confidence 2221 1 11 22 45699999999999999995
No 319
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=66.19 E-value=24 Score=34.00 Aligned_cols=90 Identities=18% Similarity=0.251 Sum_probs=53.9
Q ss_pred hhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCC--CCceecCCCchhhhhhhhhhccCh--hHHHHH
Q psy12533 114 NGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLP--EGPMLLNPTSLLNAFHTEVIEKKP--QEFKIS 189 (567)
Q Consensus 114 ~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP--~GPlllsp~~l~~al~REvi~k~p--~~fKi~ 189 (567)
+|+.++.+.++++||++.-+|+.+.. ..+..|+. .+|- -..++++. ++...+| +.|+..
T Consensus 97 ~g~~~~L~~L~~~g~~~~i~Tn~~~~---~~~~~l~~-----~~l~~~f~~i~~~~---------~~~~~KP~~~~~~~~ 159 (221)
T TIGR02253 97 PGVRDTLMELRESGYRLGIITDGLPV---KQWEKLER-----LGVRDFFDAVITSE---------EEGVEKPHPKIFYAA 159 (221)
T ss_pred CCHHHHHHHHHHCCCEEEEEeCCchH---HHHHHHHh-----CChHHhccEEEEec---------cCCCCCCCHHHHHHH
Confidence 48889999999999999999997533 23444554 2221 01133222 2222344 445433
Q ss_pred HHHHHHHhCCCCCCCEEEecCCcc-cchhhhhhcCCCC
Q psy12533 190 CLRDIMALFPPNTQPFYAGYGNKV-NDVWSYQAVGIPL 226 (567)
Q Consensus 190 ~L~~i~~lf~~~~~pf~agfGNr~-tDv~aY~~vGIp~ 226 (567)
+ ..++-...- ..-+|++. +|+.+=+++|+..
T Consensus 160 ~-----~~~~~~~~~-~~~igDs~~~di~~A~~aG~~~ 191 (221)
T TIGR02253 160 L-----KRLGVKPEE-AVMVGDRLDKDIKGAKNLGMKT 191 (221)
T ss_pred H-----HHcCCChhh-EEEECCChHHHHHHHHHCCCEE
Confidence 3 223211111 45788987 8999999999976
No 320
>TIGR01497 kdpB K+-transporting ATPase, B subunit. One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.
Probab=65.85 E-value=23 Score=41.72 Aligned_cols=87 Identities=18% Similarity=0.283 Sum_probs=63.9
Q ss_pred ccccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhccChhHHHH
Q psy12533 109 KDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKI 188 (567)
Q Consensus 109 kDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GPlllsp~~l~~al~REvi~k~p~~fKi 188 (567)
+|-.++|+.+.++.+++.|.+++-+|+....-+.. .-+. .++.. .+. .-.|+ -|.
T Consensus 444 ~D~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~---iA~~-----lGI~~---------v~a-------~~~Pe-dK~ 498 (675)
T TIGR01497 444 KDIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAA---IAAE-----AGVDD---------FIA-------EATPE-DKI 498 (675)
T ss_pred cccchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHH---HHHH-----cCCCE---------EEc-------CCCHH-HHH
Confidence 78999999999999999999999999976555433 3333 33321 111 12454 499
Q ss_pred HHHHHHHHhCCCCCCCEEEecCCcccchhhhhhcCCC
Q psy12533 189 SCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIP 225 (567)
Q Consensus 189 ~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp 225 (567)
+.++.+++. +. .++-.|+..+|+-|-+++++.
T Consensus 499 ~~v~~lq~~----g~-~VamvGDG~NDapAL~~AdvG 530 (675)
T TIGR01497 499 ALIRQEQAE----GK-LVAMTGDGTNDAPALAQADVG 530 (675)
T ss_pred HHHHHHHHc----CC-eEEEECCCcchHHHHHhCCEe
Confidence 999998874 22 589999999999999998655
No 321
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=65.74 E-value=15 Score=35.07 Aligned_cols=66 Identities=8% Similarity=0.084 Sum_probs=46.6
Q ss_pred CCcEEEEecCCccccCCccccccc--------------------ccc--cc--ccchhHHHHHHHHHHCCceEEEEccCc
Q psy12533 82 NDKIVISDIDGTITKSDVLGHVLP--------------------IMG--KD--WAQNGVTRLFTKIKENGYKLLYLSARA 137 (567)
Q Consensus 82 ~~kiVISDIDGTITkSD~lG~il~--------------------~lG--kD--wth~GVa~Ly~~i~~nGY~ilYLSaRp 137 (567)
..+++|.|+|.|+..|-.....-. .++ .. ..+||+.++...++++ |++.-.|+-+
T Consensus 5 ~kl~LVLDLDeTLihs~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~v~~rPgv~efL~~l~~~-yel~I~T~~~ 83 (156)
T TIGR02250 5 KKLHLVLDLDQTLIHTTKDPTLSEWEKYDIEEPNSETRRDLRKFNLGTMWYLTKLRPFLHEFLKEASKL-YEMHVYTMGT 83 (156)
T ss_pred CceEEEEeCCCCcccccccCccchhhhcccccCCccccccceEEEcCCeEEEEEECCCHHHHHHHHHhh-cEEEEEeCCc
Confidence 345899999999998766432100 011 11 3478999999999966 9999999988
Q ss_pred ccchHHHHHHH
Q psy12533 138 IGQSRVTREYL 148 (567)
Q Consensus 138 i~~a~~Tr~~L 148 (567)
-..|+..-+.|
T Consensus 84 ~~yA~~vl~~l 94 (156)
T TIGR02250 84 RAYAQAIAKLI 94 (156)
T ss_pred HHHHHHHHHHh
Confidence 77776655555
No 322
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=65.57 E-value=3.3 Score=41.23 Aligned_cols=92 Identities=16% Similarity=0.218 Sum_probs=47.4
Q ss_pred chhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCC-CCceecCCCchhhhhhhhhhccChhHHHHHHH
Q psy12533 113 QNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLP-EGPMLLNPTSLLNAFHTEVIEKKPQEFKISCL 191 (567)
Q Consensus 113 h~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP-~GPlllsp~~l~~al~REvi~k~p~~fKi~~L 191 (567)
-+||.++...++++|.++.-.|+.+-.. ++..|.. .+|. .=+.+.+.+..- + ..+.||.|=.++
T Consensus 88 ~pGv~~~l~~L~~~~i~~avaS~s~~~~---~~~~L~~-----~gl~~~f~~~v~~~dv~-----~-~KP~Pd~yL~Aa- 152 (221)
T COG0637 88 IPGVVELLEQLKARGIPLAVASSSPRRA---AERVLAR-----LGLLDYFDVIVTADDVA-----R-GKPAPDIYLLAA- 152 (221)
T ss_pred CccHHHHHHHHHhcCCcEEEecCChHHH---HHHHHHH-----ccChhhcchhccHHHHh-----c-CCCCCHHHHHHH-
Confidence 3477788888888887766666654322 2333333 2211 111111111111 1 144555553332
Q ss_pred HHHHHh-CCCCCCCEEEecCCcccchhhhhhcCCC
Q psy12533 192 RDIMAL-FPPNTQPFYAGYGNKVNDVWSYQAVGIP 225 (567)
Q Consensus 192 ~~i~~l-f~~~~~pf~agfGNr~tDv~aY~~vGIp 225 (567)
+.+ +.+.. +.+|.+....+.|-+++|+.
T Consensus 153 ---~~Lgv~P~~---CvviEDs~~Gi~Aa~aAGm~ 181 (221)
T COG0637 153 ---ERLGVDPEE---CVVVEDSPAGIQAAKAAGMR 181 (221)
T ss_pred ---HHcCCChHH---eEEEecchhHHHHHHHCCCE
Confidence 222 22211 56889999999999999964
No 323
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=65.26 E-value=22 Score=43.02 Aligned_cols=103 Identities=20% Similarity=0.224 Sum_probs=69.1
Q ss_pred cCCcchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhh----------hh
Q psy12533 384 KDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHT----------EV 453 (567)
Q Consensus 384 kDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GPvl~spd~l~~al~r----------Ev 453 (567)
.|..++++.+..+.+++.|.+++-+||-...-|... -+. .++..+.++.-. -+..+.. +|
T Consensus 548 ~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~aI---A~~-----lGI~~~~vi~G~--el~~~~~~el~~~v~~~~V 617 (903)
T PRK15122 548 LDPPKESAAPAIAALRENGVAVKVLTGDNPIVTAKI---CRE-----VGLEPGEPLLGT--EIEAMDDAALAREVEERTV 617 (903)
T ss_pred cCccHHHHHHHHHHHHHCCCeEEEECCCCHHHHHHH---HHH-----cCCCCCCccchH--hhhhCCHHHHHHHhhhCCE
Confidence 699999999999999999999999999765444322 223 555544444211 1111111 23
Q ss_pred hccChhHHHHHHHHHHHhhCCCCCCCEEEecCCCcccHHhHHHc--CCCC
Q psy12533 454 IEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAV--GIPL 501 (567)
Q Consensus 454 i~k~p~~fK~~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~v--GIp~ 501 (567)
..+-.-+-|..+.+.++. .+ -.+|--|+-.||+-|-+++ ||..
T Consensus 618 fAr~sPe~K~~iV~~Lq~----~G-~vVamtGDGvNDaPALk~ADVGIAm 662 (903)
T PRK15122 618 FAKLTPLQKSRVLKALQA----NG-HTVGFLGDGINDAPALRDADVGISV 662 (903)
T ss_pred EEEeCHHHHHHHHHHHHh----CC-CEEEEECCCchhHHHHHhCCEEEEe
Confidence 333334669999999987 23 3478899999998888874 6654
No 324
>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]
Probab=65.21 E-value=12 Score=39.21 Aligned_cols=54 Identities=17% Similarity=0.305 Sum_probs=38.5
Q ss_pred ecCCCcEEEEecCCccccCCccccccccccccccchhHHHHHHHHHHCCc-eEEEEccCcc
Q psy12533 79 WRWNDKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGY-KLLYLSARAI 138 (567)
Q Consensus 79 w~~~~kiVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nGY-~ilYLSaRpi 138 (567)
-+...+.+++|.|||+|.- .+.=-..++-++..++.+++....- -+..+|+|+.
T Consensus 14 ~~a~~~~~~lDyDGTl~~i------~~~p~~a~~~~~l~~lL~~Las~~~~~v~iiSGR~~ 68 (266)
T COG1877 14 LNARKRLLFLDYDGTLTEI------VPHPEAAVPDDRLLSLLQDLASDPRNVVAIISGRSL 68 (266)
T ss_pred ccccceEEEEecccccccc------ccCccccCCCHHHHHHHHHHHhcCCCeEEEEeCCCH
Confidence 3455678999999999865 2222234666789999999998843 3556788875
No 325
>PRK00522 tpx lipid hydroperoxide peroxidase; Provisional
Probab=64.76 E-value=38 Score=32.12 Aligned_cols=37 Identities=8% Similarity=0.093 Sum_probs=23.4
Q ss_pred cCCCCCCEEEEcCCCcccccccccccccHhhHHhhhh
Q psy12533 497 VGIPLSRIFTINSRGEVKHEMTQTFQSTYSNMSYLVD 533 (567)
Q Consensus 497 vGIp~~rIF~In~~g~~~~~~~~~~~~sY~~l~~~vd 533 (567)
.|++.-.+|+||++|+|+..........-.++.++++
T Consensus 127 ~g~~~r~tfvId~~G~I~~~~~~~~~~~~~~~~~~l~ 163 (167)
T PRK00522 127 KGLLARAVFVLDENNKVVYSELVPEITNEPDYDAALA 163 (167)
T ss_pred CCceeeEEEEECCCCeEEEEEECCCcCCCCCHHHHHH
Confidence 3667778999999999987653222233344444443
No 326
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=64.63 E-value=47 Score=36.68 Aligned_cols=90 Identities=18% Similarity=0.138 Sum_probs=58.2
Q ss_pred cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCC--CceecCCCchhhhhhhhhhccChhHHHHH
Q psy12533 387 AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPE--GPMLLNPTSLLNAFHTEVIEKKPQEFKIS 464 (567)
Q Consensus 387 ~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~--GPvl~spd~l~~al~rEvi~k~p~~fK~~ 464 (567)
.-||+.++.+.++++||++--+|+.+...+ +..|+. +++-+ -.++.+.+ .- -.++|+.|...
T Consensus 331 l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~---~~~l~~-----~~l~~~f~~i~~~d~-v~-------~~~kP~~~~~a 394 (459)
T PRK06698 331 LYPNVKEIFTYIKENNCSIYIASNGLTEYL---RAIVSY-----YDLDQWVTETFSIEQ-IN-------SLNKSDLVKSI 394 (459)
T ss_pred cCCCHHHHHHHHHHCCCeEEEEeCCchHHH---HHHHHH-----CCcHhhcceeEecCC-CC-------CCCCcHHHHHH
Confidence 457999999999999999999999766544 444544 23211 11232221 10 13578766544
Q ss_pred HHHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCC
Q psy12533 465 CLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIP 500 (567)
Q Consensus 465 ~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp 500 (567)
+ +.+ .. .. ...+|++.+|+.+=+++|+.
T Consensus 395 l-~~l----~~--~~-~v~VGDs~~Di~aAk~AG~~ 422 (459)
T PRK06698 395 L-NKY----DI--KE-AAVVGDRLSDINAAKDNGLI 422 (459)
T ss_pred H-Hhc----Cc--ce-EEEEeCCHHHHHHHHHCCCe
Confidence 3 322 22 22 46899999999999999995
No 327
>cd03018 PRX_AhpE_like Peroxiredoxin (PRX) family, AhpE-like subfamily; composed of proteins similar to Mycobacterium tuberculosis AhpE. AhpE is described as a 1-cys PRX because of the absence of a resolving cysteine. The structure and sequence of AhpE, however, show greater similarity to 2-cys PRXs than 1-cys PRXs. PRXs are thiol-specific antioxidant (TSA) proteins that confer a protective role in cells through their peroxidase activity in which hydrogen peroxide, peroxynitrate, and organic hydroperoxides are reduced and detoxified using reducing equivalents derived from either thioredoxin, glutathione, trypanothione and AhpF. The first step of catalysis is the nucleophilic attack by the peroxidatic cysteine on the peroxide leading to the formation of a cysteine sulfenic acid intermediate. The absence of a resolving cysteine suggests that functional AhpE is regenerated by an external reductant. The solution behavior and crystal structure of AhpE show that it forms dimers and octamers.
Probab=64.58 E-value=47 Score=29.93 Aligned_cols=34 Identities=12% Similarity=0.172 Sum_probs=25.7
Q ss_pred hhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHh
Q psy12533 389 NGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQS 425 (567)
Q Consensus 389 ~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~ 425 (567)
+...+++.++.++|.+++-+|.-+ ....++|++.
T Consensus 49 ~~l~~~~~~~~~~~v~vi~vs~d~---~~~~~~~~~~ 82 (149)
T cd03018 49 CALRDSLELFEAAGAEVLGISVDS---PFSLRAWAEE 82 (149)
T ss_pred HHHHHHHHHHHhCCCEEEEecCCC---HHHHHHHHHh
Confidence 356788888999999999998754 3346777766
No 328
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=64.46 E-value=12 Score=37.66 Aligned_cols=97 Identities=10% Similarity=0.119 Sum_probs=55.4
Q ss_pred cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhccChhHHHHHHH
Q psy12533 387 AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCL 466 (567)
Q Consensus 387 ~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GPvl~spd~l~~al~rEvi~k~p~~fK~~~L 466 (567)
..+||.++.+.|+++||++.-+|+.+.... +..+..... ..|.+ . -+..|... .-..++|+.|...+
T Consensus 96 lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~---~~~~~~~~~--~~L~~--~---f~~~fd~~--~g~KP~p~~y~~i~- 162 (220)
T TIGR01691 96 LYPDVPPALEAWLQLGLRLAVYSSGSVPAQ---KLLFGHSDA--GNLTP--Y---FSGYFDTT--VGLKTEAQSYVKIA- 162 (220)
T ss_pred cCcCHHHHHHHHHHCCCEEEEEeCCCHHHH---HHHHhhccc--cchhh--h---cceEEEeC--cccCCCHHHHHHHH-
Confidence 567999999999999999999998765543 333332110 11111 0 11222210 01134556665443
Q ss_pred HHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCCC
Q psy12533 467 RDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPL 501 (567)
Q Consensus 467 ~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~ 501 (567)
+.+. + ++ .. ..-+|++..|+.|=+++|+..
T Consensus 163 ~~lg-v-~p-~e--~lfVgDs~~Di~AA~~AG~~t 192 (220)
T TIGR01691 163 GQLG-S-PP-RE--ILFLSDIINELDAARKAGLHT 192 (220)
T ss_pred HHhC-c-Ch-hH--EEEEeCCHHHHHHHHHcCCEE
Confidence 3321 1 11 22 235788899999999999964
No 329
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=64.45 E-value=10 Score=38.24 Aligned_cols=97 Identities=11% Similarity=0.160 Sum_probs=53.7
Q ss_pred cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhccChhHHHHHHH
Q psy12533 112 AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCL 191 (567)
Q Consensus 112 th~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GPlllsp~~l~~al~REvi~k~p~~fKi~~L 191 (567)
..+||.++.+.++++||++.-+|+.+.... +..+..... ..|. +. -+..|... .-..+.|+.|...+
T Consensus 96 lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~---~~~~~~~~~--~~L~--~~---f~~~fd~~--~g~KP~p~~y~~i~- 162 (220)
T TIGR01691 96 LYPDVPPALEAWLQLGLRLAVYSSGSVPAQ---KLLFGHSDA--GNLT--PY---FSGYFDTT--VGLKTEAQSYVKIA- 162 (220)
T ss_pred cCcCHHHHHHHHHHCCCEEEEEeCCCHHHH---HHHHhhccc--cchh--hh---cceEEEeC--cccCCCHHHHHHHH-
Confidence 456999999999999999999999765433 333332110 1111 11 11222210 00133444443333
Q ss_pred HHHHHhCCCCCCCEEEecCCcccchhhhhhcCCCC
Q psy12533 192 RDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPL 226 (567)
Q Consensus 192 ~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~ 226 (567)
+.+ .+ ++ .. ..-+|++..|+.|=+++|+..
T Consensus 163 ~~l-gv-~p-~e--~lfVgDs~~Di~AA~~AG~~t 192 (220)
T TIGR01691 163 GQL-GS-PP-RE--ILFLSDIINELDAARKAGLHT 192 (220)
T ss_pred HHh-Cc-Ch-hH--EEEEeCCHHHHHHHHHcCCEE
Confidence 332 11 12 12 345678899999999999964
No 330
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=64.31 E-value=3.8 Score=38.73 Aligned_cols=14 Identities=21% Similarity=0.344 Sum_probs=12.4
Q ss_pred EEEEecCCccccCC
Q psy12533 85 IVISDIDGTITKSD 98 (567)
Q Consensus 85 iVISDIDGTITkSD 98 (567)
+||||.||||..|.
T Consensus 2 ~viFDlDGTL~ds~ 15 (184)
T TIGR01993 2 VWFFDLDNTLYPHS 15 (184)
T ss_pred eEEEeCCCCCCCCc
Confidence 69999999999874
No 331
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=63.83 E-value=4 Score=38.58 Aligned_cols=14 Identities=21% Similarity=0.344 Sum_probs=12.6
Q ss_pred EEEEecCCccccCC
Q psy12533 360 IVISDIDGTITKSD 373 (567)
Q Consensus 360 iVIsDIDGTiTkSD 373 (567)
+||||.||||..|.
T Consensus 2 ~viFDlDGTL~ds~ 15 (184)
T TIGR01993 2 VWFFDLDNTLYPHS 15 (184)
T ss_pred eEEEeCCCCCCCCc
Confidence 69999999999874
No 332
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=63.37 E-value=3.9 Score=40.75 Aligned_cols=96 Identities=17% Similarity=0.263 Sum_probs=53.2
Q ss_pred cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCC-C-CceecCCCchhhhhhhhhh--ccChhHHH
Q psy12533 387 AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLP-E-GPMLLNPTSLLNAFHTEVI--EKKPQEFK 462 (567)
Q Consensus 387 ~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP-~-GPvl~spd~l~~al~rEvi--~k~p~~fK 462 (567)
.-|||.++...++++|..+.-.|+.+-.-. +..|.. .+|. . ..+++ .+ +|. .+.|+.|=
T Consensus 87 ~~pGv~~~l~~L~~~~i~~avaS~s~~~~~---~~~L~~-----~gl~~~f~~~v~-~~--------dv~~~KP~Pd~yL 149 (221)
T COG0637 87 PIPGVVELLEQLKARGIPLAVASSSPRRAA---ERVLAR-----LGLLDYFDVIVT-AD--------DVARGKPAPDIYL 149 (221)
T ss_pred CCccHHHHHHHHHhcCCcEEEecCChHHHH---HHHHHH-----ccChhhcchhcc-HH--------HHhcCCCCCHHHH
Confidence 456888888888888877766666553333 333333 2221 1 11111 11 222 44557664
Q ss_pred HHHHHHHHhh-CCCCCCCEEEecCCCcccHHhHHHcCCCCCCEEEEcC
Q psy12533 463 ISCLRDIMAL-FPPNTQPFYAGYGNKVNDVWSYQAVGIPLSRIFTINS 509 (567)
Q Consensus 463 ~~~L~~i~~l-f~~~~~pf~agfGNr~tDv~aY~~vGIp~~rIF~In~ 509 (567)
.++ +.| +.+ .. +.+|.+..+.+.|-+++|+. ++.|..
T Consensus 150 ~Aa----~~Lgv~P-~~--CvviEDs~~Gi~Aa~aAGm~---vv~v~~ 187 (221)
T COG0637 150 LAA----ERLGVDP-EE--CVVVEDSPAGIQAAKAAGMR---VVGVPA 187 (221)
T ss_pred HHH----HHcCCCh-HH--eEEEecchhHHHHHHHCCCE---EEEecC
Confidence 433 222 222 11 46899999999999999984 444443
No 333
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=63.20 E-value=25 Score=38.62 Aligned_cols=91 Identities=11% Similarity=0.162 Sum_probs=55.4
Q ss_pred hhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCC--CceecCCCchhhhhhhhhhccChhHHHHHHH
Q psy12533 114 NGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPE--GPMLLNPTSLLNAFHTEVIEKKPQEFKISCL 191 (567)
Q Consensus 114 ~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~--GPlllsp~~l~~al~REvi~k~p~~fKi~~L 191 (567)
+|+.++...++++|+++--+|+++.. .++..|+. .+|.. -.++.+.+.. ....+|+.|..++
T Consensus 219 pGa~ElL~~Lk~~GiklaIaSn~~~~---~~~~~L~~-----lgL~~yFd~Iv~sddv~-------~~KP~Peifl~A~- 282 (381)
T PLN02575 219 TGSQEFVNVLMNYKIPMALVSTRPRK---TLENAIGS-----IGIRGFFSVIVAAEDVY-------RGKPDPEMFIYAA- 282 (381)
T ss_pred cCHHHHHHHHHHCCCeEEEEeCCCHH---HHHHHHHH-----cCCHHHceEEEecCcCC-------CCCCCHHHHHHHH-
Confidence 48889999999999999999997744 34555555 33221 1122222110 1233445555433
Q ss_pred HHHHHhCCCCCCCEEEecCCcccchhhhhhcCCC
Q psy12533 192 RDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIP 225 (567)
Q Consensus 192 ~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp 225 (567)
+.+ .+ .+ .. ...||++.+|+.|=+++|+.
T Consensus 283 ~~l-gl-~P-ee--cl~IGDS~~DIeAAk~AGm~ 311 (381)
T PLN02575 283 QLL-NF-IP-ER--CIVFGNSNQTVEAAHDARMK 311 (381)
T ss_pred HHc-CC-Cc-cc--EEEEcCCHHHHHHHHHcCCE
Confidence 222 11 11 12 55799999999999999995
No 334
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=62.18 E-value=25 Score=33.74 Aligned_cols=93 Identities=11% Similarity=0.193 Sum_probs=54.6
Q ss_pred chhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCC--CceecCCCchhhhhhhhhhccChhHHHHHH
Q psy12533 388 QNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPE--GPMLLNPTSLLNAFHTEVIEKKPQEFKISC 465 (567)
Q Consensus 388 h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~--GPvl~spd~l~~al~rEvi~k~p~~fK~~~ 465 (567)
.+|+.++.+.++++ |++.-+|+.+.... +.-|.. .++-. .-++.+.+-. ...++|+.|...+
T Consensus 99 ~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~---~~~l~~-----~~l~~~fd~i~~~~~~~-------~~KP~~~~~~~~~ 162 (224)
T TIGR02254 99 LPGAFELMENLQQK-FRLYIVTNGVRETQ---YKRLRK-----SGLFPFFDDIFVSEDAG-------IQKPDKEIFNYAL 162 (224)
T ss_pred CccHHHHHHHHHhc-CcEEEEeCCchHHH---HHHHHH-----CCcHhhcCEEEEcCccC-------CCCCCHHHHHHHH
Confidence 57899999999999 99999999764433 333333 22211 1222222100 0134556666433
Q ss_pred HHHHHhhCCCCCCCEEEecCCCc-ccHHhHHHcCCCC
Q psy12533 466 LRDIMALFPPNTQPFYAGYGNKV-NDVWSYQAVGIPL 501 (567)
Q Consensus 466 L~~i~~lf~~~~~pf~agfGNr~-tDv~aY~~vGIp~ 501 (567)
+.+..+ .+ .. ..-+|++. +|+.+-+++|++.
T Consensus 163 -~~~~~~-~~-~~--~v~igD~~~~di~~A~~~G~~~ 194 (224)
T TIGR02254 163 -ERMPKF-SK-EE--VLMIGDSLTADIKGGQNAGLDT 194 (224)
T ss_pred -HHhcCC-Cc-hh--eEEECCCcHHHHHHHHHCCCcE
Confidence 322111 11 12 34689987 7999999999986
No 335
>cd02969 PRX_like1 Peroxiredoxin (PRX)-like 1 family; hypothetical proteins that show sequence similarity to PRXs. Members of this group contain a conserved cysteine that aligns to the first cysteine in the CXXC motif of TRX. This does not correspond to the peroxidatic cysteine found in PRXs, which aligns to the second cysteine in the CXXC motif of TRX. In addition, these proteins do not contain the other two conserved residues of the catalytic triad of PRX. PRXs confer a protective antioxidant role in cells through their peroxidase activity in which hydrogen peroxide, peroxynitrate, and organic hydroperoxides are reduced and detoxified using reducing equivalents derived from either thioredoxin, glutathione, trypanothione and AhpF.
Probab=61.99 E-value=44 Score=31.37 Aligned_cols=48 Identities=17% Similarity=0.289 Sum_probs=32.8
Q ss_pred hhHHHHHHHHHHCCceEEEEccCcc-----cchHHHHHHHHhcccCCccCCCCceecCC
Q psy12533 114 NGVTRLFTKIKENGYKLLYLSARAI-----GQSRVTREYLQSVKQEDLTLPEGPMLLNP 167 (567)
Q Consensus 114 ~GVa~Ly~~i~~nGY~ilYLSaRpi-----~~a~~Tr~~L~~~~q~~~~LP~GPlllsp 167 (567)
+.+.+|+.++++.|..|+-+|..+. .-.+..+.|++. +++| -|++..+
T Consensus 45 ~~l~~l~~~~~~~~v~~v~is~d~~~~~~~d~~~~~~~~~~~-----~~~~-~~~l~D~ 97 (171)
T cd02969 45 DRLNRLAKEYGAKGVAVVAINSNDIEAYPEDSPENMKAKAKE-----HGYP-FPYLLDE 97 (171)
T ss_pred HHHHHHHHHHhhCCeEEEEEecCccccccccCHHHHHHHHHH-----CCCC-ceEEECC
Confidence 3678888889888999998887553 234556666666 5565 5566544
No 336
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=61.72 E-value=8.7 Score=38.26 Aligned_cols=48 Identities=15% Similarity=0.216 Sum_probs=28.2
Q ss_pred EEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHCCc-eEEEEccCcccc
Q psy12533 362 ISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGY-KLLYLSARAIGQ 415 (567)
Q Consensus 362 IsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~nGY-~iiYLSaRpi~q 415 (567)
.+|.||||+.- .+.-..-..++++.++.+++.+..- .+.-+|||+...
T Consensus 1 ~lDyDGTL~p~------~~~p~~~~~~~~~~~~L~~La~~~~~~v~IvSGR~~~~ 49 (235)
T PF02358_consen 1 FLDYDGTLAPI------VDDPDAAVPPPELRELLRALAADPNNTVAIVSGRSLDD 49 (235)
T ss_dssp EEE-TTTSS---------S-GGG----HHHHHHHHHHHHHSE--EEEE-SS-HHH
T ss_pred CcccCCccCCC------CCCccccCCCHHHHHHHHHHhccCCCEEEEEEeCCHHH
Confidence 47999999954 2221223468899999999998865 567789998766
No 337
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=61.66 E-value=4.5 Score=45.66 Aligned_cols=40 Identities=15% Similarity=0.106 Sum_probs=25.9
Q ss_pred HHHHHHHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCCCCCEEEEcC
Q psy12533 461 FKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLSRIFTINS 509 (567)
Q Consensus 461 fK~~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~~rIF~In~ 509 (567)
-|...|+ ..++. ..+- .|||+..+|..+-..++- -|.|++
T Consensus 176 ~Kv~rl~---~~~g~-~~~~-~aYgDS~sD~plL~~a~e----~y~V~~ 215 (497)
T PLN02177 176 HKRDAVL---KEFGD-ALPD-LGLGDRETDHDFMSICKE----GYMVPR 215 (497)
T ss_pred HHHHHHH---HHhCC-CCce-EEEECCccHHHHHHhCCc----cEEeCC
Confidence 3666665 33332 2232 599999999999888773 356666
No 338
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=61.63 E-value=4.4 Score=39.43 Aligned_cols=18 Identities=39% Similarity=0.518 Sum_probs=14.8
Q ss_pred CCcEEEEecCCccccCCc
Q psy12533 82 NDKIVISDIDGTITKSDV 99 (567)
Q Consensus 82 ~~kiVISDIDGTITkSD~ 99 (567)
.-|.||||+||||..+..
T Consensus 3 ~~~~viFD~DGTL~d~~~ 20 (221)
T PRK10563 3 QIEAVFFDCDGTLVDSEV 20 (221)
T ss_pred CCCEEEECCCCCCCCChH
Confidence 357899999999998743
No 339
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=61.31 E-value=3.8 Score=38.22 Aligned_cols=15 Identities=20% Similarity=0.326 Sum_probs=12.9
Q ss_pred EEEEecCCccccCCc
Q psy12533 85 IVISDIDGTITKSDV 99 (567)
Q Consensus 85 iVISDIDGTITkSD~ 99 (567)
+|+||+||||..+..
T Consensus 1 ~viFD~DGTL~D~~~ 15 (175)
T TIGR01493 1 AMVFDVYGTLVDVHG 15 (175)
T ss_pred CeEEecCCcCcccHH
Confidence 589999999998763
No 340
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=61.24 E-value=4.6 Score=45.57 Aligned_cols=16 Identities=38% Similarity=0.613 Sum_probs=14.3
Q ss_pred CcEEEEecCCccccCC
Q psy12533 83 DKIVISDIDGTITKSD 98 (567)
Q Consensus 83 ~kiVISDIDGTITkSD 98 (567)
.+.|+||+|||||++|
T Consensus 22 ~~~~~FDfDGTLt~~~ 37 (497)
T PLN02177 22 NQTVAADLDGTLLISR 37 (497)
T ss_pred ccEEEEecCCcccCCC
Confidence 4579999999999987
No 341
>KOG0207|consensus
Probab=60.89 E-value=33 Score=41.44 Aligned_cols=103 Identities=21% Similarity=0.353 Sum_probs=70.4
Q ss_pred EEEEecCCccccCCcccccccccc-ccccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCce
Q psy12533 85 IVISDIDGTITKSDVLGHVLPIMG-KDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPM 163 (567)
Q Consensus 85 iVISDIDGTITkSD~lG~il~~lG-kDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GPl 163 (567)
+|..-|||+++. .++ .|-.+++++...+.+++.|++.+-||+-...-|..+.+=+- +-
T Consensus 705 vv~v~vn~~l~g---------v~~l~D~vr~~a~~av~~Lk~~Gi~v~mLTGDn~~aA~svA~~VG--------i~---- 763 (951)
T KOG0207|consen 705 VVYVAVNGQLVG---------VFALEDQVRPDAALAVAELKSMGIKVVMLTGDNDAAARSVAQQVG--------ID---- 763 (951)
T ss_pred EEEEEECCEEEE---------EEEeccccchhHHHHHHHHHhcCceEEEEcCCCHHHHHHHHHhhC--------cc----
Confidence 555666666552 122 68899999999999999999999999987766654433221 11
Q ss_pred ecCCCchhhhhhhhhhccChhHHHHHHHHHHHHhCCCCCCCEEEecCCcccchhhhhh--cCCCC
Q psy12533 164 LLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQA--VGIPL 226 (567)
Q Consensus 164 llsp~~l~~al~REvi~k~p~~fKi~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~--vGIp~ 226 (567)
.. +-|+ .| .-|.+.+++|+.- ..+ +|-.|+..||.-|-.+ +||..
T Consensus 764 -----~V----~aev---~P-~~K~~~Ik~lq~~----~~~-VaMVGDGINDaPALA~AdVGIai 810 (951)
T KOG0207|consen 764 -----NV----YAEV---LP-EQKAEKIKEIQKN----GGP-VAMVGDGINDAPALAQADVGIAI 810 (951)
T ss_pred -----eE----Eecc---Cc-hhhHHHHHHHHhc----CCc-EEEEeCCCCccHHHHhhccceee
Confidence 01 1122 22 3588888888874 444 8999999999888876 46543
No 342
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=60.20 E-value=18 Score=36.97 Aligned_cols=15 Identities=40% Similarity=0.587 Sum_probs=13.5
Q ss_pred EEEEecCCccccCCc
Q psy12533 85 IVISDIDGTITKSDV 99 (567)
Q Consensus 85 iVISDIDGTITkSD~ 99 (567)
+||||-|+||+..|.
T Consensus 2 LvvfDFD~TIvd~ds 16 (234)
T PF06888_consen 2 LVVFDFDHTIVDQDS 16 (234)
T ss_pred EEEEeCCCCccCCcc
Confidence 589999999999776
No 343
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=60.12 E-value=19 Score=36.92 Aligned_cols=47 Identities=21% Similarity=0.423 Sum_probs=28.7
Q ss_pred chhHHHHHHHH--HHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCC--ceecCC
Q psy12533 388 QNGVTRLFTKI--KENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEG--PMLLNP 442 (567)
Q Consensus 388 h~Gva~l~~~i--~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~G--Pvl~sp 442 (567)
+||+.++++.+ +.+|+.++-+|- +-.--...||+. ++|-.- .|+++|
T Consensus 73 ~pgm~~~l~~l~~~~~~~~~~IiSD---aNs~fI~~iL~~-----~gl~~~f~~I~TNp 123 (234)
T PF06888_consen 73 DPGMKELLRFLAKNQRGFDLIIISD---ANSFFIETILEH-----HGLRDCFSEIFTNP 123 (234)
T ss_pred CccHHHHHHHHHhcCCCceEEEEeC---CcHhHHHHHHHh-----CCCccccceEEeCC
Confidence 45666777777 346777777764 444455667766 665432 456665
No 344
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=60.07 E-value=36 Score=40.07 Aligned_cols=88 Identities=20% Similarity=0.323 Sum_probs=63.0
Q ss_pred cCCcchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhccChhHHHH
Q psy12533 384 KDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKI 463 (567)
Q Consensus 384 kDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GPvl~spd~l~~al~rEvi~k~p~~fK~ 463 (567)
+|..++|+.+.++.+++.|.+++-+||-...-+ +..-+. .++.+ .+. .-.| +-|.
T Consensus 443 ~D~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA---~aIA~e-----lGId~---------v~A-------~~~P-edK~ 497 (679)
T PRK01122 443 KDIVKPGIKERFAELRKMGIKTVMITGDNPLTA---AAIAAE-----AGVDD---------FLA-------EATP-EDKL 497 (679)
T ss_pred eccCchhHHHHHHHHHHCCCeEEEECCCCHHHH---HHHHHH-----cCCcE---------EEc-------cCCH-HHHH
Confidence 799999999999999999999999999654443 222223 44432 111 1134 5599
Q ss_pred HHHHHHHhhCCCCCCCEEEecCCCcccHHhHHHc--CCCC
Q psy12533 464 SCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAV--GIPL 501 (567)
Q Consensus 464 ~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~v--GIp~ 501 (567)
++++.+++ .+ -.+|--|+-.||.-|-+++ ||..
T Consensus 498 ~iV~~lQ~----~G-~~VaMtGDGvNDAPALa~ADVGIAM 532 (679)
T PRK01122 498 ALIRQEQA----EG-RLVAMTGDGTNDAPALAQADVGVAM 532 (679)
T ss_pred HHHHHHHH----cC-CeEEEECCCcchHHHHHhCCEeEEe
Confidence 99999988 23 3478889999999888886 6543
No 345
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=59.46 E-value=34 Score=41.22 Aligned_cols=103 Identities=12% Similarity=0.112 Sum_probs=67.3
Q ss_pred ccccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCC-------chhhhhhh-hhhc
Q psy12533 109 KDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPT-------SLLNAFHT-EVIE 180 (567)
Q Consensus 109 kDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GPlllsp~-------~l~~al~R-Evi~ 180 (567)
.|-.++++.+..+.+++.|.+++-+|+-...-|.. .-+. .++..+.++.-.+ .+...+.+ +|..
T Consensus 513 ~Dp~R~~~~~aI~~l~~aGI~vvmiTGD~~~tA~a---IA~~-----lGI~~~~v~~g~~l~~~~~~el~~~~~~~~vfA 584 (867)
T TIGR01524 513 LDPPKESTKEAIAALFKNGINVKVLTGDNEIVTAR---ICQE-----VGIDANDFLLGADIEELSDEELARELRKYHIFA 584 (867)
T ss_pred eCCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHH---HHHH-----cCCCCCCeeecHhhhhCCHHHHHHHhhhCeEEE
Confidence 78899999999999999999999999966554432 2223 4454444443221 01100000 2233
Q ss_pred cChhHHHHHHHHHHHHhCCCCCCCEEEecCCcccchhhhhhcCC
Q psy12533 181 KKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGI 224 (567)
Q Consensus 181 k~p~~fKi~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGI 224 (567)
+-.-+-|.++.+.+++. .-.+|-.|+..+|+-|-+++.|
T Consensus 585 r~~Pe~K~~iV~~lq~~-----G~vVam~GDGvNDapALk~AdV 623 (867)
T TIGR01524 585 RLTPMQKSRIIGLLKKA-----GHTVGFLGDGINDAPALRKADV 623 (867)
T ss_pred ECCHHHHHHHHHHHHhC-----CCEEEEECCCcccHHHHHhCCE
Confidence 33335699998888874 2358999999999988887543
No 346
>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.
Probab=58.89 E-value=41 Score=41.54 Aligned_cols=103 Identities=19% Similarity=0.260 Sum_probs=67.5
Q ss_pred cCCcchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCc-----------eecCCCchhhhhhhh
Q psy12533 384 KDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGP-----------MLLNPTSLLNAFHTE 452 (567)
Q Consensus 384 kDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GP-----------vl~spd~l~~al~rE 452 (567)
.|..++++.+....+++.|.+++-+||....-|..+-. . .++.... ..++... +..+..|
T Consensus 644 ~Dp~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~---~-----~Gi~~~~~~~~~~~~~~~~vitG~~-l~~l~~~ 714 (1053)
T TIGR01523 644 YDPPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQ---E-----VGIIPPNFIHDRDEIMDSMVMTGSQ-FDALSDE 714 (1053)
T ss_pred ecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHH---H-----cCCCCccccccccccccceeeehHH-hhhcCHH
Confidence 68999999999999999999999999987665533332 3 4443211 1111111 1111111
Q ss_pred ----------hhccChhHHHHHHHHHHHhhCCCCCCCEEEecCCCcccHHhHHHc--CCC
Q psy12533 453 ----------VIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAV--GIP 500 (567)
Q Consensus 453 ----------vi~k~p~~fK~~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~v--GIp 500 (567)
|..+-.-+.|.++++.++.. + ..++..|+-.||+-|-+++ ||.
T Consensus 715 ~l~~~~~~~~V~ar~sP~~K~~iV~~lq~~----g-~~Vam~GDGvNDapaLk~AdVGIA 769 (1053)
T TIGR01523 715 EVDDLKALCLVIARCAPQTKVKMIEALHRR----K-AFCAMTGDGVNDSPSLKMANVGIA 769 (1053)
T ss_pred HHHHHhhcCeEEEecCHHHHHHHHHHHHhc----C-CeeEEeCCCcchHHHHHhCCccEe
Confidence 22332346799999998872 3 3578999999999999986 554
No 347
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=58.84 E-value=4.3 Score=37.81 Aligned_cols=14 Identities=21% Similarity=0.427 Sum_probs=12.5
Q ss_pred EEEEecCCccccCC
Q psy12533 360 IVISDIDGTITKSD 373 (567)
Q Consensus 360 iVIsDIDGTiTkSD 373 (567)
+|+||+||||..+.
T Consensus 1 ~viFD~DGTL~D~~ 14 (175)
T TIGR01493 1 AMVFDVYGTLVDVH 14 (175)
T ss_pred CeEEecCCcCcccH
Confidence 48999999999876
No 348
>COG4996 Predicted phosphatase [General function prediction only]
Probab=58.70 E-value=29 Score=33.24 Aligned_cols=20 Identities=15% Similarity=0.300 Sum_probs=14.3
Q ss_pred cEEEEecCCccccCCccccc
Q psy12533 84 KIVISDIDGTITKSDVLGHV 103 (567)
Q Consensus 84 kiVISDIDGTITkSD~lG~i 103 (567)
+++++|.|||+-.-.-+..+
T Consensus 1 ~~i~~d~d~t~wdhh~iSsl 20 (164)
T COG4996 1 RAIVFDADKTLWDHHNISSL 20 (164)
T ss_pred CcEEEeCCCcccccccchhc
Confidence 36899999999765444433
No 349
>KOG0207|consensus
Probab=58.46 E-value=42 Score=40.62 Aligned_cols=135 Identities=19% Similarity=0.270 Sum_probs=87.3
Q ss_pred EecCHHHHhcCcCCCCCceeEEEEE-ecccCeeeeeeeEEeeeCCCeEEEEecCCccccCCcccccccccCcCCcchhHH
Q psy12533 314 LRLTSEQIAGLELRSGMNEVEFSVT-TAYQGTTRCKCYLFKWRWNDKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVT 392 (567)
Q Consensus 314 l~ltseqL~~l~L~~G~n~V~f~v~-s~~~g~~~~~~~iylw~~~~kiVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva 392 (567)
..+-..++.++|=......|.--++ +.++| .-+|.+-|||+++.- | -=.|-.+++++
T Consensus 672 i~iGN~~~~~r~~~~~~~~i~~~~~~~e~~g--------------~tvv~v~vn~~l~gv-----~---~l~D~vr~~a~ 729 (951)
T KOG0207|consen 672 VLIGNKEWMSRNGCSIPDDILDALTESERKG--------------QTVVYVAVNGQLVGV-----F---ALEDQVRPDAA 729 (951)
T ss_pred EeechHHHHHhcCCCCchhHHHhhhhHhhcC--------------ceEEEEEECCEEEEE-----E---EeccccchhHH
Confidence 5555566666555554444442221 12223 334777888888742 1 01688999999
Q ss_pred HHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhccChhHHHHHHHHHHHhh
Q psy12533 393 RLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMAL 472 (567)
Q Consensus 393 ~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GPvl~spd~l~~al~rEvi~k~p~~fK~~~L~~i~~l 472 (567)
...+.++++|++.+-|||-...-|..+.+ . .++- .. +-|+ .| .-|.+..++|+.
T Consensus 730 ~av~~Lk~~Gi~v~mLTGDn~~aA~svA~---~-----VGi~---------~V----~aev---~P-~~K~~~Ik~lq~- 783 (951)
T KOG0207|consen 730 LAVAELKSMGIKVVMLTGDNDAAARSVAQ---Q-----VGID---------NV----YAEV---LP-EQKAEKIKEIQK- 783 (951)
T ss_pred HHHHHHHhcCceEEEEcCCCHHHHHHHHH---h-----hCcc---------eE----Eecc---Cc-hhhHHHHHHHHh-
Confidence 99999999999999999987776655443 2 2211 11 1122 23 458889999988
Q ss_pred CCCCCCCEEEecCCCcccHHhHHH--cCCC
Q psy12533 473 FPPNTQPFYAGYGNKVNDVWSYQA--VGIP 500 (567)
Q Consensus 473 f~~~~~pf~agfGNr~tDv~aY~~--vGIp 500 (567)
+.++ +|-.|+-.||.-|-.+ +||.
T Consensus 784 ---~~~~-VaMVGDGINDaPALA~AdVGIa 809 (951)
T KOG0207|consen 784 ---NGGP-VAMVGDGINDAPALAQADVGIA 809 (951)
T ss_pred ---cCCc-EEEEeCCCCccHHHHhhcccee
Confidence 4555 7899999999888876 4654
No 350
>cd03012 TlpA_like_DipZ_like TlpA-like family, DipZ-like subfamily; composed uncharacterized proteins containing a TlpA-like TRX domain. Some members show domain architectures similar to that of E. coli DipZ protein (also known as DsbD). The only eukaryotic members of the TlpA family belong to this subfamily. TlpA is a disulfide reductase known to have a crucial role in the biogenesis of cytochrome aa3.
Probab=58.41 E-value=23 Score=31.52 Aligned_cols=37 Identities=14% Similarity=0.126 Sum_probs=23.8
Q ss_pred hhHHHHHHHHHHCCceEEEEccCcc---cchHHHHHHHHh
Q psy12533 114 NGVTRLFTKIKENGYKLLYLSARAI---GQSRVTREYLQS 150 (567)
Q Consensus 114 ~GVa~Ly~~i~~nGY~ilYLSaRpi---~~a~~Tr~~L~~ 150 (567)
+...++++++++.|..++.+++-.. .-.+..++|++.
T Consensus 43 p~l~~l~~~~~~~~~~vi~i~~~~~~~~~~~~~~~~~~~~ 82 (126)
T cd03012 43 PYLTDLEQKYKDDGLVVIGVHSPEFAFERDLANVKSAVLR 82 (126)
T ss_pred HHHHHHHHHcCcCCeEEEEeccCccccccCHHHHHHHHHH
Confidence 3567788888888888888875321 224455566655
No 351
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=57.97 E-value=11 Score=37.52 Aligned_cols=48 Identities=15% Similarity=0.184 Sum_probs=28.4
Q ss_pred EEecCCccccCCccccccccccccccchhHHHHHHHHHHCCc-eEEEEccCcccc
Q psy12533 87 ISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGY-KLLYLSARAIGQ 140 (567)
Q Consensus 87 ISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nGY-~ilYLSaRpi~~ 140 (567)
.+|.||||+.-. +.-......+++.++.+++.+..- .+.-+|+|+...
T Consensus 1 ~lDyDGTL~p~~------~~p~~~~~~~~~~~~L~~La~~~~~~v~IvSGR~~~~ 49 (235)
T PF02358_consen 1 FLDYDGTLAPIV------DDPDAAVPPPELRELLRALAADPNNTVAIVSGRSLDD 49 (235)
T ss_dssp EEE-TTTSS---------S-GGG----HHHHHHHHHHHHHSE--EEEE-SS-HHH
T ss_pred CcccCCccCCCC------CCccccCCCHHHHHHHHHHhccCCCEEEEEEeCCHHH
Confidence 479999999542 222233667899999999998854 677789998766
No 352
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=56.72 E-value=39 Score=32.59 Aligned_cols=93 Identities=16% Similarity=0.272 Sum_probs=56.6
Q ss_pred chhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCC--CceecCCCchhhhhhhhhhccChhHHHHHH
Q psy12533 388 QNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPE--GPMLLNPTSLLNAFHTEVIEKKPQEFKISC 465 (567)
Q Consensus 388 h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~--GPvl~spd~l~~al~rEvi~k~p~~fK~~~ 465 (567)
.||+.++...++++||++.-+|+.+... .+..|+. .+|-. ..++++.+ .. .-.++|+.|+.++
T Consensus 96 ~~g~~~~L~~L~~~g~~~~i~Tn~~~~~---~~~~l~~-----~~l~~~f~~i~~~~~-~~------~~KP~~~~~~~~~ 160 (221)
T TIGR02253 96 YPGVRDTLMELRESGYRLGIITDGLPVK---QWEKLER-----LGVRDFFDAVITSEE-EG------VEKPHPKIFYAAL 160 (221)
T ss_pred CCCHHHHHHHHHHCCCEEEEEeCCchHH---HHHHHHh-----CChHHhccEEEEecc-CC------CCCCCHHHHHHHH
Confidence 5699999999999999999999976332 3444544 22211 11333221 10 0133456665443
Q ss_pred HHHHHhhCCCCCCCEEEecCCCc-ccHHhHHHcCCCC
Q psy12533 466 LRDIMALFPPNTQPFYAGYGNKV-NDVWSYQAVGIPL 501 (567)
Q Consensus 466 L~~i~~lf~~~~~pf~agfGNr~-tDv~aY~~vGIp~ 501 (567)
+. ++-...- ..-+|++. +|+.+=+++|+..
T Consensus 161 -~~----~~~~~~~-~~~igDs~~~di~~A~~aG~~~ 191 (221)
T TIGR02253 161 -KR----LGVKPEE-AVMVGDRLDKDIKGAKNLGMKT 191 (221)
T ss_pred -HH----cCCChhh-EEEECCChHHHHHHHHHCCCEE
Confidence 22 2211112 35799997 8999999999986
No 353
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=56.64 E-value=39 Score=40.76 Aligned_cols=101 Identities=18% Similarity=0.282 Sum_probs=66.9
Q ss_pred ccccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCC--CceecCCCchhhhhhh----------
Q psy12533 109 KDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPE--GPMLLNPTSLLNAFHT---------- 176 (567)
Q Consensus 109 kDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~--GPlllsp~~l~~al~R---------- 176 (567)
.|-.++|+.+....+++.|.++.-+|+....-|..... . .++.. +.++ +...+ ..+..
T Consensus 526 ~Dp~r~~~~~~i~~l~~~Gi~v~miTGD~~~tA~~ia~---~-----~Gi~~~~~~~v-~g~~l-~~~~~~~l~~~~~~~ 595 (884)
T TIGR01522 526 NDPPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIAR---R-----LGMPSKTSQSV-SGEKL-DAMDDQQLSQIVPKV 595 (884)
T ss_pred cCcchhHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHH---H-----cCCCCCCCcee-EhHHh-HhCCHHHHHHHhhcC
Confidence 68899999999999999999999999987766644433 3 33321 1111 11111 11110
Q ss_pred hhhccChhHHHHHHHHHHHHhCCCCCCCEEEecCCcccchhhhhhcCC
Q psy12533 177 EVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGI 224 (567)
Q Consensus 177 Evi~k~p~~fKi~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGI 224 (567)
.|..+-.-+.|..+++.++.. .-.++..|+..+|+-|-++++|
T Consensus 596 ~Vfar~~P~~K~~iv~~lq~~-----g~~v~mvGDGvND~pAl~~AdV 638 (884)
T TIGR01522 596 AVFARASPEHKMKIVKALQKR-----GDVVAMTGDGVNDAPALKLADI 638 (884)
T ss_pred eEEEECCHHHHHHHHHHHHHC-----CCEEEEECCCcccHHHHHhCCe
Confidence 122333335688888888875 2358899999999999999865
No 354
>PF08924 DUF1906: Domain of unknown function (DUF1906); InterPro: IPR015020 This entry represents a family of uncharacterised hypothetical bacterial proteins. ; PDB: 1SFS_A.
Probab=56.56 E-value=6.3 Score=36.88 Aligned_cols=41 Identities=27% Similarity=0.443 Sum_probs=26.8
Q ss_pred HHHHHHHHCCceEE--EEccCccc----chHHHHHHHHhcccCCccC
Q psy12533 393 RLFTKIKENGYKLL--YLSARAIG----QSRVTREYLQSVKQEDLTL 433 (567)
Q Consensus 393 ~l~~~i~~nGY~ii--YLSaRpi~----qa~~Tr~~L~~~~Q~~~~l 433 (567)
...+.|+++||+++ |||.+... +...|++|+..|...|..+
T Consensus 8 ~~~~~l~~aGy~~VgrYl~~~~~~~~~~~k~Lt~~e~~~i~~~Gl~i 54 (136)
T PF08924_consen 8 ASAQALKAAGYRAVGRYLSGSRGGCAMRQKNLTAGEVQDIRAAGLRI 54 (136)
T ss_dssp HHHHHHHHT---SEEEESS-BTTTB-----B--HHHHHHHHHTT-EE
T ss_pred HHHHHHHHCCCCEEEEEcCCCCCCcccccCCCCHHHHHHHHHCCCEE
Confidence 45677999999987 99999876 4599999999999977554
No 355
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=56.32 E-value=49 Score=39.05 Aligned_cols=87 Identities=18% Similarity=0.302 Sum_probs=62.6
Q ss_pred ccccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhcc-ChhHHH
Q psy12533 109 KDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEK-KPQEFK 187 (567)
Q Consensus 109 kDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GPlllsp~~l~~al~REvi~k-~p~~fK 187 (567)
+|-.++|+.+.++.+++.|.+++-||+-...-| +..-+. .++.+ . ..+ .| +-|
T Consensus 443 ~D~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA---~aIA~e-----lGId~---------v--------~A~~~P-edK 496 (679)
T PRK01122 443 KDIVKPGIKERFAELRKMGIKTVMITGDNPLTA---AAIAAE-----AGVDD---------F--------LAEATP-EDK 496 (679)
T ss_pred eccCchhHHHHHHHHHHCCCeEEEECCCCHHHH---HHHHHH-----cCCcE---------E--------EccCCH-HHH
Confidence 788999999999999999999999999544333 222223 44431 1 122 34 459
Q ss_pred HHHHHHHHHhCCCCCCCEEEecCCcccchhhhhhc--CCCC
Q psy12533 188 ISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAV--GIPL 226 (567)
Q Consensus 188 i~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~v--GIp~ 226 (567)
.++++.+++. + -.+|--|+..||+-|-+++ ||..
T Consensus 497 ~~iV~~lQ~~----G-~~VaMtGDGvNDAPALa~ADVGIAM 532 (679)
T PRK01122 497 LALIRQEQAE----G-RLVAMTGDGTNDAPALAQADVGVAM 532 (679)
T ss_pred HHHHHHHHHc----C-CeEEEECCCcchHHHHHhCCEeEEe
Confidence 9999999874 2 3589999999999888875 6543
No 356
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=55.72 E-value=42 Score=39.77 Aligned_cols=104 Identities=16% Similarity=0.209 Sum_probs=66.0
Q ss_pred ccccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCC----ceecCC-------Cchhhhhhhh
Q psy12533 109 KDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEG----PMLLNP-------TSLLNAFHTE 177 (567)
Q Consensus 109 kDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~G----Plllsp-------~~l~~al~RE 177 (567)
.|-.++++.+..+.+++.|.+++-+|+....-|...-. . .++... .-+... +.-+..+-++
T Consensus 440 ~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~---~-----lGI~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 511 (755)
T TIGR01647 440 FDPPRHDTKETIERARHLGVEVKMVTGDHLAIAKETAR---R-----LGLGTNIYTADVLLKGDNRDDLPSGELGEMVED 511 (755)
T ss_pred cCCChhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHH---H-----cCCCCCCcCHHHhcCCcchhhCCHHHHHHHHHh
Confidence 78999999999999999999999999987665543333 3 444321 111100 0000000000
Q ss_pred --hhcc-ChhHHHHHHHHHHHHhCCCCCCCEEEecCCcccchhhhhhc--CCCC
Q psy12533 178 --VIEK-KPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAV--GIPL 226 (567)
Q Consensus 178 --vi~k-~p~~fKi~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~v--GIp~ 226 (567)
+..+ .| +-|.++++.+++. + -.++--|+..||+-|-+++ ||..
T Consensus 512 ~~vfAr~~P-e~K~~iV~~lq~~----G-~~VamvGDGvNDapAL~~AdVGIAm 559 (755)
T TIGR01647 512 ADGFAEVFP-EHKYEIVEILQKR----G-HLVGMTGDGVNDAPALKKADVGIAV 559 (755)
T ss_pred CCEEEecCH-HHHHHHHHHHHhc----C-CEEEEEcCCcccHHHHHhCCeeEEe
Confidence 2222 34 4599999998874 2 3589999999998888875 5543
No 357
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=55.63 E-value=39 Score=40.94 Aligned_cols=105 Identities=20% Similarity=0.206 Sum_probs=68.2
Q ss_pred ccccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecC-------CCchhhhhhh-hhhc
Q psy12533 109 KDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLN-------PTSLLNAFHT-EVIE 180 (567)
Q Consensus 109 kDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GPllls-------p~~l~~al~R-Evi~ 180 (567)
.|-.++++.+..+.+++.|.+++-+|+-...-|.. .-+. .++..+.++.- .+.+...+.+ +|..
T Consensus 548 ~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~a---IA~~-----lGI~~~~vi~G~el~~~~~~el~~~v~~~~VfA 619 (903)
T PRK15122 548 LDPPKESAAPAIAALRENGVAVKVLTGDNPIVTAK---ICRE-----VGLEPGEPLLGTEIEAMDDAALAREVEERTVFA 619 (903)
T ss_pred cCccHHHHHHHHHHHHHCCCeEEEECCCCHHHHHH---HHHH-----cCCCCCCccchHhhhhCCHHHHHHHhhhCCEEE
Confidence 68999999999999999999999999965444432 2223 44544443321 1111111111 2333
Q ss_pred cChhHHHHHHHHHHHHhCCCCCCCEEEecCCcccchhhhhh--cCCCC
Q psy12533 181 KKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQA--VGIPL 226 (567)
Q Consensus 181 k~p~~fKi~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~--vGIp~ 226 (567)
+-.-+-|..+++.+++. .-.+|--|+..||+-|-++ |||..
T Consensus 620 r~sPe~K~~iV~~Lq~~-----G~vVamtGDGvNDaPALk~ADVGIAm 662 (903)
T PRK15122 620 KLTPLQKSRVLKALQAN-----GHTVGFLGDGINDAPALRDADVGISV 662 (903)
T ss_pred EeCHHHHHHHHHHHHhC-----CCEEEEECCCchhHHHHHhCCEEEEe
Confidence 33335699999998874 2358999999999888777 46654
No 358
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=55.60 E-value=55 Score=39.82 Aligned_cols=103 Identities=14% Similarity=0.154 Sum_probs=68.5
Q ss_pred cCCcchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCC--CceecCCCchhhhhhh----------
Q psy12533 384 KDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPE--GPMLLNPTSLLNAFHT---------- 451 (567)
Q Consensus 384 kDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~--GPvl~spd~l~~al~r---------- 451 (567)
+|..++++.+....+++.|.+++-+||....-|...-. . .++.. +-++ +...+ ..+..
T Consensus 577 ~Dplr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~iA~---~-----~GI~~~~~~vi-~G~~~-~~l~~~el~~~i~~~ 646 (941)
T TIGR01517 577 KDPLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIAR---N-----CGILTFGGLAM-EGKEF-RRLVYEEMDPILPKL 646 (941)
T ss_pred cCCCchhHHHHHHHHHHCCCEEEEECCCChHHHHHHHH---H-----cCCCCCCceEe-eHHHh-hhCCHHHHHHHhccC
Confidence 68999999999999999999999999987665544433 2 33321 1122 11111 11111
Q ss_pred hhhccChhHHHHHHHHHHHhhCCCCCCCEEEecCCCcccHHhHHHc--CCCC
Q psy12533 452 EVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAV--GIPL 501 (567)
Q Consensus 452 Evi~k~p~~fK~~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~v--GIp~ 501 (567)
.|..+---+-|.++.+.++. .+ ..+|.-|+-.||+-|-+++ ||..
T Consensus 647 ~Vfar~sPe~K~~iV~~lq~----~g-~vVam~GDGvNDapALk~AdVGIAm 693 (941)
T TIGR01517 647 RVLARSSPLDKQLLVLMLKD----MG-EVVAVTGDGTNDAPALKLADVGFSM 693 (941)
T ss_pred eEEEECCHHHHHHHHHHHHH----CC-CEEEEECCCCchHHHHHhCCcceec
Confidence 12233334679999999987 23 3578999999999999885 7644
No 359
>cd03012 TlpA_like_DipZ_like TlpA-like family, DipZ-like subfamily; composed uncharacterized proteins containing a TlpA-like TRX domain. Some members show domain architectures similar to that of E. coli DipZ protein (also known as DsbD). The only eukaryotic members of the TlpA family belong to this subfamily. TlpA is a disulfide reductase known to have a crucial role in the biogenesis of cytochrome aa3.
Probab=55.60 E-value=27 Score=31.10 Aligned_cols=38 Identities=13% Similarity=0.077 Sum_probs=25.5
Q ss_pred chhHHHHHHHHHHCCceEEEEccCc---ccchHHHHHHHHh
Q psy12533 388 QNGVTRLFTKIKENGYKLLYLSARA---IGQSRVTREYLQS 425 (567)
Q Consensus 388 h~Gva~l~~~i~~nGY~iiYLSaRp---i~qa~~Tr~~L~~ 425 (567)
.+...++++++++.|..++.++.-. ....+..++|++.
T Consensus 42 ~p~l~~l~~~~~~~~~~vi~i~~~~~~~~~~~~~~~~~~~~ 82 (126)
T cd03012 42 LPYLTDLEQKYKDDGLVVIGVHSPEFAFERDLANVKSAVLR 82 (126)
T ss_pred HHHHHHHHHHcCcCCeEEEEeccCccccccCHHHHHHHHHH
Confidence 4466788888888899999887621 1234455666665
No 360
>PTZ00256 glutathione peroxidase; Provisional
Probab=54.97 E-value=71 Score=30.74 Aligned_cols=62 Identities=21% Similarity=0.342 Sum_probs=38.3
Q ss_pred EecCC-ccccCCccccc-cccc-CcCCc------chhHHHHHHHHHHCCceEEEEccCc-c----cchHHHHHHHH
Q psy12533 363 SDIDG-TITKSDVLGHV-LPIM-GKDWA------QNGVTRLFTKIKENGYKLLYLSARA-I----GQSRVTREYLQ 424 (567)
Q Consensus 363 sDIDG-TiTkSD~~G~~-~~~~-GkDw~------h~Gva~l~~~i~~nGY~iiYLSaRp-i----~qa~~Tr~~L~ 424 (567)
-|+|| +++.|+..|.. +-.+ -..|. -|...+++++++++|..|+-+|.-. . ......+.|+.
T Consensus 26 ~d~~G~~vsLs~~~Gk~vvlv~n~atwCp~C~~e~p~l~~l~~~~~~~gv~vv~vs~~~~~~~~~~~~~~~~~f~~ 101 (183)
T PTZ00256 26 IDIDGQLVQLSKFKGKKAIIVVNVACKCGLTSDHYTQLVELYKQYKSQGLEILAFPCNQFMEQEPWDEPEIKEYVQ 101 (183)
T ss_pred EcCCCCEEeHHHhCCCcEEEEEEECCCCCchHHHHHHHHHHHHHHhhCCcEEEEEecccccccCCCCHHHHHHHHH
Confidence 35666 36667777762 1111 24453 3467789999999999999998532 1 12356677764
No 361
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=54.62 E-value=20 Score=33.40 Aligned_cols=89 Identities=18% Similarity=0.271 Sum_probs=50.5
Q ss_pred chhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhh--ccChhHHHHHH
Q psy12533 113 QNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVI--EKKPQEFKISC 190 (567)
Q Consensus 113 h~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GPlllsp~~l~~al~REvi--~k~p~~fKi~~ 190 (567)
.+||.++.+.++++||++.-+|+... + +..|+. .++-. . -+..+.+- ++. .++|+.|+..+
T Consensus 89 ~pg~~~~L~~L~~~g~~~~i~s~~~~--~---~~~l~~-----~~l~~--~---f~~~~~~~--~~~~~kp~p~~~~~~~ 151 (185)
T TIGR01990 89 LPGIKNLLDDLKKNNIKIALASASKN--A---PTVLEK-----LGLID--Y---FDAIVDPA--EIKKGKPDPEIFLAAA 151 (185)
T ss_pred CccHHHHHHHHHHCCCeEEEEeCCcc--H---HHHHHh-----cCcHh--h---CcEEEehh--hcCCCCCChHHHHHHH
Confidence 36899999999999999998887542 1 234544 22210 0 11111111 222 33444455443
Q ss_pred HHHHHHhCCCC-CCCEEEecCCcccchhhhhhcCCC
Q psy12533 191 LRDIMALFPPN-TQPFYAGYGNKVNDVWSYQAVGIP 225 (567)
Q Consensus 191 L~~i~~lf~~~-~~pf~agfGNr~tDv~aY~~vGIp 225 (567)
..+.-. .. ...+|++.+|+.+=+++|++
T Consensus 152 -----~~~~~~~~~--~v~vgD~~~di~aA~~aG~~ 180 (185)
T TIGR01990 152 -----EGLGVSPSE--CIGIEDAQAGIEAIKAAGMF 180 (185)
T ss_pred -----HHcCCCHHH--eEEEecCHHHHHHHHHcCCE
Confidence 222110 12 34578889999999999985
No 362
>PRK09437 bcp thioredoxin-dependent thiol peroxidase; Reviewed
Probab=54.42 E-value=79 Score=28.97 Aligned_cols=33 Identities=15% Similarity=0.292 Sum_probs=25.8
Q ss_pred hHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHh
Q psy12533 115 GVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQS 150 (567)
Q Consensus 115 GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~ 150 (567)
...+++++++++|..|+-+|..+ ....+.|++.
T Consensus 52 ~l~~~~~~~~~~~v~vi~Is~d~---~~~~~~~~~~ 84 (154)
T PRK09437 52 GLRDNMDELKKAGVVVLGISTDK---PEKLSRFAEK 84 (154)
T ss_pred HHHHHHHHHHHCCCEEEEEcCCC---HHHHHHHHHH
Confidence 46788889999999999998753 3556677766
No 363
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=54.36 E-value=52 Score=39.98 Aligned_cols=103 Identities=14% Similarity=0.170 Sum_probs=68.5
Q ss_pred cCCcchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhh----------hh
Q psy12533 384 KDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHT----------EV 453 (567)
Q Consensus 384 kDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GPvl~spd~l~~al~r----------Ev 453 (567)
.|..++++.+..+.+++.|.+++-+||-...-|.. .-+. .++..+.++.-. -+..+.. +|
T Consensus 548 ~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~---IA~~-----lGI~~~~v~~G~--el~~l~~~el~~~~~~~~V 617 (902)
T PRK10517 548 LDPPKETTAPALKALKASGVTVKILTGDSELVAAK---VCHE-----VGLDAGEVLIGS--DIETLSDDELANLAERTTL 617 (902)
T ss_pred hCcchhhHHHHHHHHHHCCCEEEEEcCCCHHHHHH---HHHH-----cCCCccCceeHH--HHHhCCHHHHHHHHhhCcE
Confidence 69999999999999999999999999975544422 2223 555444444321 1112211 22
Q ss_pred hccChhHHHHHHHHHHHhhCCCCCCCEEEecCCCcccHHhHHHc--CCCC
Q psy12533 454 IEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAV--GIPL 501 (567)
Q Consensus 454 i~k~p~~fK~~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~v--GIp~ 501 (567)
..+-.-+-|..+.+.++. .+ -.+|--|+-.||+-|-+++ ||..
T Consensus 618 fAr~sPe~K~~IV~~Lq~----~G-~vVam~GDGvNDaPALk~ADVGIAm 662 (902)
T PRK10517 618 FARLTPMHKERIVTLLKR----EG-HVVGFMGDGINDAPALRAADIGISV 662 (902)
T ss_pred EEEcCHHHHHHHHHHHHH----CC-CEEEEECCCcchHHHHHhCCEEEEe
Confidence 233334669999999987 23 3478888889999888875 6654
No 364
>PRK13189 peroxiredoxin; Provisional
Probab=54.29 E-value=54 Score=32.96 Aligned_cols=104 Identities=13% Similarity=0.219 Sum_probs=58.5
Q ss_pred hhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccC-CccCCCCceecCCCchhhhhhhhhhccChhHHHHHHHH
Q psy12533 389 NGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQE-DLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLR 467 (567)
Q Consensus 389 ~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~-~~~lP~GPvl~spd~l~~al~rEvi~k~p~~fK~~~L~ 467 (567)
+..++++.++++.|.+|+-+|.-+. ...++|++.+.+. |..+| =|++.-+++-
T Consensus 56 ~~l~~~~~ef~~~~v~VigvS~D~~---~~h~aw~~~~~~~~g~~i~-fPllsD~~~~---------------------- 109 (222)
T PRK13189 56 VAFQKRYDEFRELNTELIGLSIDQV---FSHIKWVEWIKEKLGVEIE-FPIIADDRGE---------------------- 109 (222)
T ss_pred HHHHHHHHHHHHcCCEEEEEECCCH---HHHHHHHHhHHHhcCcCcc-eeEEEcCccH----------------------
Confidence 3566788889999999999986432 2346777765442 33343 2455434321
Q ss_pred HHHhhCCCCCCCEEEecCCCcccHHhHHHcCCCCCCEEEEcCCCcccccccc--cccccHhhHHhhhhhc
Q psy12533 468 DIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLSRIFTINSRGEVKHEMTQ--TFQSTYSNMSYLVDQM 535 (567)
Q Consensus 468 ~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~~rIF~In~~g~~~~~~~~--~~~~sY~~l~~~vd~~ 535 (567)
+...| |-...+ .-|...--.|+||++|.|++.... ..-.++..+-.++|.+
T Consensus 110 -ia~~y-----------gv~~~~-----~~~~~~r~tfIID~~G~Ir~~~~~~~~~gr~~~eilr~l~al 162 (222)
T PRK13189 110 -IAKKL-----------GMISPG-----KGTNTVRAVFIIDPKGIIRAILYYPQEVGRNMDEILRLVKAL 162 (222)
T ss_pred -HHHHh-----------CCCccc-----cCCCceeEEEEECCCCeEEEEEecCCCCCCCHHHHHHHHHHh
Confidence 11111 110000 012244568999999999875432 1234577777777764
No 365
>PRK14010 potassium-transporting ATPase subunit B; Provisional
Probab=53.88 E-value=51 Score=38.81 Aligned_cols=88 Identities=22% Similarity=0.320 Sum_probs=64.7
Q ss_pred cCCcchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhccChhHHHH
Q psy12533 384 KDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKI 463 (567)
Q Consensus 384 kDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GPvl~spd~l~~al~rEvi~k~p~~fK~ 463 (567)
+|..++++.+.+..+++.|.+++-+||-...-|...-+ . .++.+ .+. |+ .| +-|.
T Consensus 439 ~Dp~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~---e-----lGI~~---------v~A----~~---~P-edK~ 493 (673)
T PRK14010 439 KDVIKDGLVERFRELREMGIETVMCTGDNELTAATIAK---E-----AGVDR---------FVA----EC---KP-EDKI 493 (673)
T ss_pred ecCCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHH---H-----cCCce---------EEc----CC---CH-HHHH
Confidence 79999999999999999999999999987665533333 3 44431 111 11 34 5699
Q ss_pred HHHHHHHhhCCCCCCCEEEecCCCcccHHhHHHc--CCCC
Q psy12533 464 SCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAV--GIPL 501 (567)
Q Consensus 464 ~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~v--GIp~ 501 (567)
+..+.+++ .+ -.+|--|+-.||+-|-+++ ||..
T Consensus 494 ~iV~~lQ~----~G-~~VaMtGDGvNDAPALa~ADVGIAM 528 (673)
T PRK14010 494 NVIREEQA----KG-HIVAMTGDGTNDAPALAEANVGLAM 528 (673)
T ss_pred HHHHHHHh----CC-CEEEEECCChhhHHHHHhCCEEEEe
Confidence 99999987 23 3478889999999998886 6544
No 366
>TIGR00385 dsbE periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily. Involved in the biogenesis of c-type cytochromes as well as in disulfide bond formation in some periplasmic proteins.
Probab=53.67 E-value=75 Score=30.13 Aligned_cols=34 Identities=12% Similarity=0.104 Sum_probs=20.8
Q ss_pred cCCCCCCEEEEcCCCceeccccccccccHHhHHhhhhh
Q psy12533 222 VGIPLSRIFTINSRGEVKHEMTQTFQSTYSNMSYLVDQ 259 (567)
Q Consensus 222 vGIp~~rIF~In~~g~~~~~~~~~~~~sY~~l~~~vd~ 259 (567)
.|+| ..|+||++|+++...... .+...|.+.++.
T Consensus 136 ~~~P--~~~~id~~G~i~~~~~G~--~~~~~l~~~l~~ 169 (173)
T TIGR00385 136 YGAP--ETFLVDGNGVILYRHAGP--LNNEVWTEGFLP 169 (173)
T ss_pred eeCC--eEEEEcCCceEEEEEecc--CCHHHHHHHHHH
Confidence 3455 479999999998654322 234555554443
No 367
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=53.36 E-value=42 Score=40.71 Aligned_cols=108 Identities=10% Similarity=0.111 Sum_probs=65.4
Q ss_pred ccccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhh----------h
Q psy12533 109 KDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTE----------V 178 (567)
Q Consensus 109 kDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GPlllsp~~l~~al~RE----------v 178 (567)
.|-.++|+.+..+.+++.|.+++.+|+....-|.....-+.-+..+.. + ...++ +... +..+..+ |
T Consensus 535 ~Dplr~~v~e~I~~l~~aGI~v~miTGD~~~tA~~ia~~~gi~~~~~~-v-~~~~~-~g~~-l~~~~~~~~~~~~~~~~v 610 (917)
T TIGR01116 535 LDPPRPEVADAIEKCRTAGIRVIMITGDNKETAEAICRRIGIFSPDED-V-TFKSF-TGRE-FDEMGPAKQRAACRSAVL 610 (917)
T ss_pred eCCCchhHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHcCCCCCCcc-c-cceee-eHHH-HhhCCHHHHHHhhhcCeE
Confidence 688999999999999999999999999866555433333322111000 0 00111 1101 1111110 1
Q ss_pred hccChhHHHHHHHHHHHHhCCCCCCCEEEecCCcccchhhhhhcCCC
Q psy12533 179 IEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIP 225 (567)
Q Consensus 179 i~k~p~~fKi~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp 225 (567)
..+-.-+.|..+++.++.. .-.++..|+..+|+.|-++++|.
T Consensus 611 ~ar~~P~~K~~iV~~lq~~-----g~~va~iGDG~ND~~alk~AdVG 652 (917)
T TIGR01116 611 FSRVEPSHKSELVELLQEQ-----GEIVAMTGDGVNDAPALKKADIG 652 (917)
T ss_pred EEecCHHHHHHHHHHHHhc-----CCeEEEecCCcchHHHHHhCCee
Confidence 2222234688888877753 23578899999999999998774
No 368
>TIGR03137 AhpC peroxiredoxin. This gene contains two invariant cysteine residues, one near the N-terminus and one near the C-terminus, each followed immediately by a proline residue.
Probab=53.04 E-value=58 Score=31.55 Aligned_cols=55 Identities=16% Similarity=0.278 Sum_probs=34.7
Q ss_pred ccccCCccccc--cccccccccch------hHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHh
Q psy12533 93 TITKSDVLGHV--LPIMGKDWAQN------GVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQS 150 (567)
Q Consensus 93 TITkSD~lG~i--l~~lGkDwth~------GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~ 150 (567)
+++.++..|.. +-..-.+|+.. ..++++.++++.|..++-+|.-+. ...+.|...
T Consensus 23 ~~sl~d~~Gk~vvl~F~p~~~cp~C~~el~~l~~~~~~~~~~gv~vi~VS~D~~---~~~~~~~~~ 85 (187)
T TIGR03137 23 EVTDEDVKGKWSVFFFYPADFTFVCPTELEDLADKYAELKKLGVEVYSVSTDTH---FVHKAWHDT 85 (187)
T ss_pred EecHHHHCCCEEEEEEECCCcCCcCHHHHHHHHHHHHHHHhcCCcEEEEeCCCH---HHHHHHHhh
Confidence 36666766753 22222566644 566788888889999999997653 233455443
No 369
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=52.93 E-value=19 Score=34.64 Aligned_cols=96 Identities=9% Similarity=0.147 Sum_probs=50.9
Q ss_pred cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhh--ccChhHHHHH
Q psy12533 112 AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVI--EKKPQEFKIS 189 (567)
Q Consensus 112 th~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GPlllsp~~l~~al~REvi--~k~p~~fKi~ 189 (567)
..+|+.++.+.++++||++.-+|+.+...... ...+.... -...+ + .++.+. ++. .+.|+.|+..
T Consensus 95 ~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~-~~~~~~~~-l~~~f-d-~v~~s~---------~~~~~KP~p~~~~~~ 161 (211)
T TIGR02247 95 LRPSMMAAIKTLRAKGFKTACITNNFPTDHSA-EEALLPGD-IMALF-D-AVVESC---------LEGLRKPDPRIYQLM 161 (211)
T ss_pred cChhHHHHHHHHHHCCCeEEEEeCCCCccchh-hhHhhhhh-hHhhC-C-EEEEee---------ecCCCCCCHHHHHHH
Confidence 35799999999999999999999865432211 11111100 00001 1 122111 222 3344456544
Q ss_pred HHHHHHHhCCCCCCCEEEecCCcccchhhhhhcCCCC
Q psy12533 190 CLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPL 226 (567)
Q Consensus 190 ~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~ 226 (567)
+ +.+. + .+ ..-++ +|++..|+.+=+++|+..
T Consensus 162 ~-~~~g-~-~~-~~~l~--i~D~~~di~aA~~aG~~~ 192 (211)
T TIGR02247 162 L-ERLG-V-AP-EECVF--LDDLGSNLKPAAALGITT 192 (211)
T ss_pred H-HHcC-C-CH-HHeEE--EcCCHHHHHHHHHcCCEE
Confidence 3 2221 1 11 12223 489999999999999854
No 370
>PRK00522 tpx lipid hydroperoxide peroxidase; Provisional
Probab=52.14 E-value=1e+02 Score=29.13 Aligned_cols=70 Identities=14% Similarity=0.079 Sum_probs=39.0
Q ss_pred EEEecCCc-cccCCccccc--cccccccccch------hHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCc
Q psy12533 86 VISDIDGT-ITKSDVLGHV--LPIMGKDWAQN------GVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDL 156 (567)
Q Consensus 86 VISDIDGT-ITkSD~lG~i--l~~lGkDwth~------GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~ 156 (567)
.+-|.||. ++.++..|.. +...-..|+-+ ...+++.++ .|..++-+|.-+. ...++|++. +
T Consensus 28 ~l~~~~g~~v~l~~~~Gk~vvl~f~~s~~cp~C~~e~~~l~~~~~~~--~~~~vv~vs~D~~---~~~~~f~~~-----~ 97 (167)
T PRK00522 28 TLVANDLSDVSLADFAGKRKVLNIFPSIDTGVCATSVRKFNQEAAEL--DNTVVLCISADLP---FAQKRFCGA-----E 97 (167)
T ss_pred EEEcCCCcEEehHHhCCCEEEEEEEcCCCCCccHHHHHHHHHHHHHc--CCcEEEEEeCCCH---HHHHHHHHh-----C
Confidence 34566774 7777777752 22222222322 334444444 4899999986432 345788887 6
Q ss_pred cCCCCceec
Q psy12533 157 TLPEGPMLL 165 (567)
Q Consensus 157 ~LP~GPlll 165 (567)
+++.-|++.
T Consensus 98 ~~~~~~~ls 106 (167)
T PRK00522 98 GLENVITLS 106 (167)
T ss_pred CCCCceEee
Confidence 676434443
No 371
>PRK10382 alkyl hydroperoxide reductase subunit C; Provisional
Probab=52.10 E-value=47 Score=32.62 Aligned_cols=33 Identities=12% Similarity=0.214 Sum_probs=24.3
Q ss_pred hHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHh
Q psy12533 390 GVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQS 425 (567)
Q Consensus 390 Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~ 425 (567)
...+++.++.+.|..++-+|.-+.- .-+.|.+.
T Consensus 53 ~l~~~~~~f~~~g~~vigIS~D~~~---~~~a~~~~ 85 (187)
T PRK10382 53 DVADHYEELQKLGVDVYSVSTDTHF---THKAWHSS 85 (187)
T ss_pred HHHHHHHHHHhCCCEEEEEeCCCHH---HHHHHHHh
Confidence 5667888899999999999964443 34666654
No 372
>PRK10382 alkyl hydroperoxide reductase subunit C; Provisional
Probab=51.75 E-value=66 Score=31.61 Aligned_cols=54 Identities=15% Similarity=0.233 Sum_probs=34.2
Q ss_pred cccCCccccc--cccccccccch------hHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHh
Q psy12533 94 ITKSDVLGHV--LPIMGKDWAQN------GVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQS 150 (567)
Q Consensus 94 ITkSD~lG~i--l~~lGkDwth~------GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~ 150 (567)
+|.||..|.. +-..-.+|+-. ...+++.++++.|..++-+|.-+. ..-+.|.+.
T Consensus 24 v~L~d~~Gk~vvL~F~P~~~~p~C~~el~~l~~~~~~f~~~g~~vigIS~D~~---~~~~a~~~~ 85 (187)
T PRK10382 24 VTEKDTEGRWSVFFFYPADFTFVCPTELGDVADHYEELQKLGVDVYSVSTDTH---FTHKAWHSS 85 (187)
T ss_pred EEHHHhCCCeEEEEEECCCCCCcCHHHHHHHHHHHHHHHhCCCEEEEEeCCCH---HHHHHHHHh
Confidence 3555666642 22233556543 566788889999999999996443 334666654
No 373
>PF10307 DUF2410: Hypothetical protein (DUF2410); InterPro: IPR018812 This entry represents a family of proteins conserved in fungi whose function is not known. There are two characteristic sequence motifs, GGWW and TGR.
Probab=51.18 E-value=80 Score=31.76 Aligned_cols=98 Identities=16% Similarity=0.260 Sum_probs=72.3
Q ss_pred ccccchhHHHHHHH-HHHCCceEEEEccCcc-cchHHHHHHHHhcccCCccCCCCceecCCC-chhhhhhhhhhccChhH
Q psy12533 109 KDWAQNGVTRLFTK-IKENGYKLLYLSARAI-GQSRVTREYLQSVKQEDLTLPEGPMLLNPT-SLLNAFHTEVIEKKPQE 185 (567)
Q Consensus 109 kDwth~GVa~Ly~~-i~~nGY~ilYLSaRpi-~~a~~Tr~~L~~~~q~~~~LP~GPlllsp~-~l~~al~REvi~k~p~~ 185 (567)
++|=...|++|.+. +++..---+-||||.. ..++..+.-|.+ .+|--=-|.|-|. +- ....-.
T Consensus 52 ~gwWNe~Iv~la~~S~~~~dtltVLLTGR~e~~F~~lI~~ml~s-----~~L~Fd~v~LKp~~~~---------~~sTm~ 117 (197)
T PF10307_consen 52 EGWWNENIVELARLSMQDPDTLTVLLTGRRESKFSSLIERMLAS-----KGLEFDAVCLKPENQR---------FSSTMD 117 (197)
T ss_pred cchhhHHHHHHHHHhhcCCCeeEEEEeCCCchhHHHHHHHHHhc-----CCCCccEEEeCccccc---------CccccH
Confidence 45667788888865 5666788888999995 888888888877 6666555555554 11 123457
Q ss_pred HHHHHHHHHHHhCCCCCCCEEEecCCcccchhhhhhc
Q psy12533 186 FKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAV 222 (567)
Q Consensus 186 fKi~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~v 222 (567)
||..+|.++...++.- .- +.-|.+|..-+..++..
T Consensus 118 fK~~~l~~ll~~Y~~~-~e-I~IYeDR~~hvk~Fr~F 152 (197)
T PF10307_consen 118 FKQAFLEDLLHTYKNA-EE-IRIYEDRPKHVKGFRDF 152 (197)
T ss_pred HHHHHHHHHHHhcCCC-CE-EEEEcCCHHHHHHHHHH
Confidence 9999999999988742 22 56899999999998875
No 374
>PTZ00253 tryparedoxin peroxidase; Provisional
Probab=51.17 E-value=65 Score=31.45 Aligned_cols=46 Identities=17% Similarity=0.113 Sum_probs=31.3
Q ss_pred ccccCCccccc--cccccccccch------hHHHHHHHHHHCCceEEEEccCcc
Q psy12533 93 TITKSDVLGHV--LPIMGKDWAQN------GVTRLFTKIKENGYKLLYLSARAI 138 (567)
Q Consensus 93 TITkSD~lG~i--l~~lGkDwth~------GVa~Ly~~i~~nGY~ilYLSaRpi 138 (567)
|++-+|..|.. +-..-.+|+.. ..++++.++++.|.+|+-+|..+.
T Consensus 28 ~v~l~d~~Gk~~lL~F~p~~~~~~C~~e~~~l~~~~~~f~~~g~~vv~IS~d~~ 81 (199)
T PTZ00253 28 KISLSSYKGKWVVLFFYPLDFTFVCPTEIIQFSDSVKRFNELNCEVLACSMDSE 81 (199)
T ss_pred EEeHHHHCCCEEEEEEEcCCCCCcCHHHHHHHHHHHHHHHHcCCEEEEEeCCCH
Confidence 57777777752 21122344433 677889999999999999998653
No 375
>PHA02597 30.2 hypothetical protein; Provisional
Probab=50.92 E-value=31 Score=32.95 Aligned_cols=94 Identities=14% Similarity=0.220 Sum_probs=50.3
Q ss_pred cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhccChhHHHHHHH
Q psy12533 387 AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCL 466 (567)
Q Consensus 387 ~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GPvl~spd~l~~al~rEvi~k~p~~fK~~~L 466 (567)
..||+.++.++++++ |+++.+|+.+..........+. +. ..+| + . + +... ..+....+|+.|+.++
T Consensus 75 ~~pG~~e~L~~L~~~-~~~~i~Tn~~~~~~~~~~~~~~-l~---~~f~-~-~-f--~~i~---~~~~~~~kp~~~~~a~- 140 (197)
T PHA02597 75 AYDDALDVINKLKED-YDFVAVTALGDSIDALLNRQFN-LN---ALFP-G-A-F--SEVL---MCGHDESKEKLFIKAK- 140 (197)
T ss_pred CCCCHHHHHHHHHhc-CCEEEEeCCccchhHHHHhhCC-HH---HhCC-C-c-c--cEEE---EeccCcccHHHHHHHH-
Confidence 467899999999987 5777888865432221111110 00 1111 1 0 0 0111 0111133565555443
Q ss_pred HHHHhhCCCCCCCEEEecCCCcccHHhHHHc--CCCC
Q psy12533 467 RDIMALFPPNTQPFYAGYGNKVNDVWSYQAV--GIPL 501 (567)
Q Consensus 467 ~~i~~lf~~~~~pf~agfGNr~tDv~aY~~v--GIp~ 501 (567)
+. +.+ .. ..-+|++.+|+.|=+++ ||+.
T Consensus 141 ~~----~~~--~~-~v~vgDs~~di~aA~~a~~Gi~~ 170 (197)
T PHA02597 141 EK----YGD--RV-VCFVDDLAHNLDAAHEALSQLPV 170 (197)
T ss_pred HH----hCC--Cc-EEEeCCCHHHHHHHHHHHcCCcE
Confidence 22 221 11 44799999999999998 9983
No 376
>cd02071 MM_CoA_mut_B12_BD methylmalonyl CoA mutase B12 binding domain. This domain binds to B12 (adenosylcobamide), which initiates the conversion of succinyl CoA and methylmalonyl CoA by forming an adenosyl radical, which then undergoes a rearrangement exchanging a hydrogen atom with a group attached to a neighboring carbon atom. This family is present in both mammals and bacteria. Bacterial members are heterodimers and involved in the fermentation of pyruvate to propionate. Mammalian members are homodimers and responsible for the conversion of odd-chain fatty acids and branched-chain amino acids via propionyl CoA to succinyl CoA for further degradation.
Probab=49.46 E-value=1.1e+02 Score=27.62 Aligned_cols=98 Identities=13% Similarity=0.142 Sum_probs=53.0
Q ss_pred ccccccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhccChhHH
Q psy12533 107 MGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEF 186 (567)
Q Consensus 107 lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GPlllsp~~l~~al~REvi~k~p~~f 186 (567)
++-|+-..|.--+-..++.+||.++||-.+ ....+..+...++ + |+ -|.+|-. . ..+...
T Consensus 7 ~~gd~H~lG~~~~~~~l~~~G~~vi~lG~~-vp~e~~~~~a~~~----~---~d-~V~iS~~--~---------~~~~~~ 66 (122)
T cd02071 7 PGLDGHDRGAKVIARALRDAGFEVIYTGLR-QTPEEIVEAAIQE----D---VD-VIGLSSL--S---------GGHMTL 66 (122)
T ss_pred cCCChhHHHHHHHHHHHHHCCCEEEECCCC-CCHHHHHHHHHHc----C---CC-EEEEccc--c---------hhhHHH
Confidence 455666667766666789999999999987 3333444443333 1 11 1333321 1 011111
Q ss_pred HHHHHHHHHHhCCCCCCCEEEecCCcccchhhhhhcCCC
Q psy12533 187 KISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIP 225 (567)
Q Consensus 187 Ki~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp 225 (567)
=.+.++.++..-++ ..++++|......+...|++.|+.
T Consensus 67 ~~~~~~~L~~~~~~-~i~i~~GG~~~~~~~~~~~~~G~d 104 (122)
T cd02071 67 FPEVIELLRELGAG-DILVVGGGIIPPEDYELLKEMGVA 104 (122)
T ss_pred HHHHHHHHHhcCCC-CCEEEEECCCCHHHHHHHHHCCCC
Confidence 13345556665232 345555544434458889999965
No 377
>PF08924 DUF1906: Domain of unknown function (DUF1906); InterPro: IPR015020 This entry represents a family of uncharacterised hypothetical bacterial proteins. ; PDB: 1SFS_A.
Probab=49.27 E-value=8.8 Score=35.91 Aligned_cols=41 Identities=24% Similarity=0.402 Sum_probs=27.5
Q ss_pred HHHHHHHHCCceEE--EEccCcccc----hHHHHHHHHhcccCCccC
Q psy12533 118 RLFTKIKENGYKLL--YLSARAIGQ----SRVTREYLQSVKQEDLTL 158 (567)
Q Consensus 118 ~Ly~~i~~nGY~il--YLSaRpi~~----a~~Tr~~L~~~~q~~~~L 158 (567)
...+.|+++||+++ |||.+.-.. ...|++|+..|...|..+
T Consensus 8 ~~~~~l~~aGy~~VgrYl~~~~~~~~~~~k~Lt~~e~~~i~~~Gl~i 54 (136)
T PF08924_consen 8 ASAQALKAAGYRAVGRYLSGSRGGCAMRQKNLTAGEVQDIRAAGLRI 54 (136)
T ss_dssp HHHHHHHHT---SEEEESS-BTTTB-----B--HHHHHHHHHTT-EE
T ss_pred HHHHHHHHCCCCEEEEEcCCCCCCcccccCCCCHHHHHHHHHCCCEE
Confidence 45678999999987 999998774 499999999999988553
No 378
>cd03014 PRX_Atyp2cys Peroxiredoxin (PRX) family, Atypical 2-cys PRX subfamily; composed of PRXs containing peroxidatic and resolving cysteines, similar to the homodimeric thiol specific antioxidant (TSA) protein also known as TRX-dependent thiol peroxidase (Tpx). Tpx is a bacterial periplasmic peroxidase which differs from other PRXs in that it shows substrate specificity toward alkyl hydroperoxides over hydrogen peroxide. As with all other PRXs, the peroxidatic cysteine (N-terminal) of Tpx is oxidized into a sulfenic acid intermediate upon reaction with peroxides. Tpx is able to resolve this intermediate by forming an intramolecular disulfide bond with a conserved C-terminal cysteine (the resolving cysteine), which can then be reduced by thioredoxin. This differs from the typical 2-cys PRX which resolves the oxidized cysteine by forming an intermolecular disulfide bond with the resolving cysteine from the other subunit of the homodimer. Atypical 2-cys PRX homodimers have a loop-based
Probab=49.20 E-value=59 Score=29.30 Aligned_cols=60 Identities=13% Similarity=0.183 Sum_probs=33.4
Q ss_pred EEEecCC-ccccCCccccc--ccccccccc------chhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHh
Q psy12533 86 VISDIDG-TITKSDVLGHV--LPIMGKDWA------QNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQS 150 (567)
Q Consensus 86 VISDIDG-TITkSD~lG~i--l~~lGkDwt------h~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~ 150 (567)
-+.|.|| +++-++..|.. +.+.-..|+ .+...+++.++ .|..|+-+|.-. ....++|.+.
T Consensus 10 ~l~~~~g~~~~l~~~~gk~vvl~f~~~~~c~~C~~e~~~l~~~~~~~--~~~~vi~Is~d~---~~~~~~~~~~ 78 (143)
T cd03014 10 TLVTSDLSEVSLADFAGKVKVISVFPSIDTPVCATQTKRFNKEAAKL--DNTVVLTISADL---PFAQKRWCGA 78 (143)
T ss_pred EEECCCCcEEeHHHhCCCeEEEEEEcCCCCCcCHHHHHHHHHHHHhc--CCCEEEEEECCC---HHHHHHHHHh
Confidence 3456666 56667666642 211111222 22455566664 389999998532 3445778776
No 379
>PF00578 AhpC-TSA: AhpC/TSA family; InterPro: IPR000866 Peroxiredoxins (Prxs) are a ubiquitous family of antioxidant enzymes that also control cytokine-induced peroxide levels which mediate signal transduction in mammalian cells. Prxs can be regulated by changes to phosphorylation, redox and possibly oligomerisation states. Prxs are divided into three classes: typical 2-Cys Prxs; atypical 2-Cys Prxs; and 1-Cys Prxs. All Prxs share the same basic catalytic mechanism, in which an active-site cysteine (the peroxidatic cysteine) is oxidised to a sulphenic acid by the peroxide substrate. The recycling of the sulphenic acid back to a thiol is what distinguishes the three enzyme classes. Using crystal structures, a detailed catalytic cycle has been derived for typical 2-Cys Prxs, including a model for the redox-regulated oligomeric state proposed to control enzyme activity []. Alkyl hydroperoxide reductase (AhpC) is responsible for directly reducing organic hyperoxides in its reduced dithiol form. Thiol specific antioxidant (TSA) is a physiologically important antioxidant which constitutes an enzymatic defence against sulphur-containing radicals. This family contains AhpC and TSA, as well as related proteins.; GO: 0016209 antioxidant activity, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1QMV_A 1PRX_B 3HJP_C 3HA9_A 2V41_G 2V32_C 2V2G_C 3LWA_A 3IA1_B 1ZYE_G ....
Probab=49.12 E-value=34 Score=29.62 Aligned_cols=74 Identities=26% Similarity=0.478 Sum_probs=50.5
Q ss_pred EEEecCC-ccccCCccccc--cccccccccch------hHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCc
Q psy12533 86 VISDIDG-TITKSDVLGHV--LPIMGKDWAQN------GVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDL 156 (567)
Q Consensus 86 VISDIDG-TITkSD~lG~i--l~~lGkDwth~------GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~ 156 (567)
..-|+|| +++.++..|.. +-+....|... ...+++.+++++|++++-+|.-+.. ..++|++. +
T Consensus 9 ~l~~~~g~~~~l~~l~gk~~vl~f~~~~~c~~c~~~l~~l~~~~~~~~~~~~~vi~is~d~~~---~~~~~~~~-----~ 80 (124)
T PF00578_consen 9 TLTDSDGKTVSLSDLKGKPVVLFFWPTAWCPFCQAELPELNELYKKYKDKGVQVIGISTDDPE---EIKQFLEE-----Y 80 (124)
T ss_dssp EEETTTSEEEEGGGGTTSEEEEEEESTTTSHHHHHHHHHHHHHHHHHHTTTEEEEEEESSSHH---HHHHHHHH-----H
T ss_pred EeECCCCCEEEHHHHCCCcEEEEEeCccCccccccchhHHHHHhhhhccceEEeeeccccccc---chhhhhhh-----h
Confidence 3447785 77788887743 33444445443 6678899999999999999995544 67888887 4
Q ss_pred cCCCCceecCCC
Q psy12533 157 TLPEGPMLLNPT 168 (567)
Q Consensus 157 ~LP~GPlllsp~ 168 (567)
++ +-|++.-++
T Consensus 81 ~~-~~~~~~D~~ 91 (124)
T PF00578_consen 81 GL-PFPVLSDPD 91 (124)
T ss_dssp TC-SSEEEEETT
T ss_pred cc-ccccccCcc
Confidence 43 346665443
No 380
>PLN02811 hydrolase
Probab=49.11 E-value=56 Score=32.00 Aligned_cols=98 Identities=13% Similarity=0.203 Sum_probs=55.1
Q ss_pred cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCC-ccCCCCceecCCCchhhhhhhhhh--ccChhHHHH
Q psy12533 387 AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQED-LTLPEGPMLLNPTSLLNAFHTEVI--EKKPQEFKI 463 (567)
Q Consensus 387 ~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~-~~lP~GPvl~spd~l~~al~rEvi--~k~p~~fK~ 463 (567)
..+||.++.+.++++||++.-+|+.+.... +...+.. .+ ..+.+ .++ +.+ ..++- .++|+.|..
T Consensus 79 l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~--~~~~~~~---~~l~~~f~-~i~-~~~------~~~~~~~KP~p~~~~~ 145 (220)
T PLN02811 79 LMPGAERLVRHLHAKGIPIAIATGSHKRHF--DLKTQRH---GELFSLMH-HVV-TGD------DPEVKQGKPAPDIFLA 145 (220)
T ss_pred CCccHHHHHHHHHHCCCcEEEEeCCchhhH--HHHHccc---HHHHhhCC-EEE-ECC------hhhccCCCCCcHHHHH
Confidence 468999999999999999999998654322 1111110 00 01111 122 222 11222 345566655
Q ss_pred HHHHHHHh-hCCCCCCCEEEecCCCcccHHhHHHcCCCC
Q psy12533 464 SCLRDIMA-LFPPNTQPFYAGYGNKVNDVWSYQAVGIPL 501 (567)
Q Consensus 464 ~~L~~i~~-lf~~~~~pf~agfGNr~tDv~aY~~vGIp~ 501 (567)
++ +.+.. =+.+ .. +..+|++..|+.|=+++|++.
T Consensus 146 a~-~~~~~~~~~~-~~--~v~IgDs~~di~aA~~aG~~~ 180 (220)
T PLN02811 146 AA-RRFEDGPVDP-GK--VLVFEDAPSGVEAAKNAGMSV 180 (220)
T ss_pred HH-HHhCCCCCCc-cc--eEEEeccHhhHHHHHHCCCeE
Confidence 43 22210 0111 12 457899999999999999964
No 381
>cd03014 PRX_Atyp2cys Peroxiredoxin (PRX) family, Atypical 2-cys PRX subfamily; composed of PRXs containing peroxidatic and resolving cysteines, similar to the homodimeric thiol specific antioxidant (TSA) protein also known as TRX-dependent thiol peroxidase (Tpx). Tpx is a bacterial periplasmic peroxidase which differs from other PRXs in that it shows substrate specificity toward alkyl hydroperoxides over hydrogen peroxide. As with all other PRXs, the peroxidatic cysteine (N-terminal) of Tpx is oxidized into a sulfenic acid intermediate upon reaction with peroxides. Tpx is able to resolve this intermediate by forming an intramolecular disulfide bond with a conserved C-terminal cysteine (the resolving cysteine), which can then be reduced by thioredoxin. This differs from the typical 2-cys PRX which resolves the oxidized cysteine by forming an intermolecular disulfide bond with the resolving cysteine from the other subunit of the homodimer. Atypical 2-cys PRX homodimers have a loop-based
Probab=48.87 E-value=91 Score=28.05 Aligned_cols=32 Identities=13% Similarity=0.174 Sum_probs=20.9
Q ss_pred hhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHh
Q psy12533 389 NGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQS 425 (567)
Q Consensus 389 ~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~ 425 (567)
+...+++.++ .|..|+-+|.-. ....++|.+.
T Consensus 47 ~~l~~~~~~~--~~~~vi~Is~d~---~~~~~~~~~~ 78 (143)
T cd03014 47 KRFNKEAAKL--DNTVVLTISADL---PFAQKRWCGA 78 (143)
T ss_pred HHHHHHHHhc--CCCEEEEEECCC---HHHHHHHHHh
Confidence 3555666664 489999998532 3345888776
No 382
>PRK15412 thiol:disulfide interchange protein DsbE; Provisional
Probab=48.00 E-value=1e+02 Score=29.64 Aligned_cols=41 Identities=7% Similarity=0.265 Sum_probs=24.5
Q ss_pred cccccchhHH--HHHHHHHHCCceEEEEccCcccchHHHHHHHHh
Q psy12533 108 GKDWAQNGVT--RLFTKIKENGYKLLYLSARAIGQSRVTREYLQS 150 (567)
Q Consensus 108 GkDwth~GVa--~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~ 150 (567)
...|..+=.. ..+.++++.|.+|+.++.... .+..++|++.
T Consensus 76 watwC~~C~~e~p~l~~l~~~~~~vi~v~~~~~--~~~~~~~~~~ 118 (185)
T PRK15412 76 WATWCPTCRAEHQYLNQLSAQGIRVVGMNYKDD--RQKAISWLKE 118 (185)
T ss_pred ECCCCHHHHHHHHHHHHHHHcCCEEEEEECCCC--HHHHHHHHHH
Confidence 3456655222 234566777999999985321 2445667766
No 383
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=47.57 E-value=61 Score=35.79 Aligned_cols=89 Identities=18% Similarity=0.168 Sum_probs=56.3
Q ss_pred hhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCC--CceecCCCchhhhhhhhhhccChhHHHHHHH
Q psy12533 114 NGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPE--GPMLLNPTSLLNAFHTEVIEKKPQEFKISCL 191 (567)
Q Consensus 114 ~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~--GPlllsp~~l~~al~REvi~k~p~~fKi~~L 191 (567)
+|+.++...++++||++--+|+.+...+ +..|+. +++-. -.++.+.+ .- ..++|+.|...+
T Consensus 333 pG~~e~L~~Lk~~g~~l~IvS~~~~~~~---~~~l~~-----~~l~~~f~~i~~~d~-v~-------~~~kP~~~~~al- 395 (459)
T PRK06698 333 PNVKEIFTYIKENNCSIYIASNGLTEYL---RAIVSY-----YDLDQWVTETFSIEQ-IN-------SLNKSDLVKSIL- 395 (459)
T ss_pred CCHHHHHHHHHHCCCeEEEEeCCchHHH---HHHHHH-----CCcHhhcceeEecCC-CC-------CCCCcHHHHHHH-
Confidence 5999999999999999999999665444 444544 22211 11232221 10 135776554433
Q ss_pred HHHHHhCCCCCCCEEEecCCcccchhhhhhcCCCC
Q psy12533 192 RDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPL 226 (567)
Q Consensus 192 ~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~ 226 (567)
+. +.+ .. ...+|++.+|+.+=+++|+..
T Consensus 396 ~~----l~~--~~-~v~VGDs~~Di~aAk~AG~~~ 423 (459)
T PRK06698 396 NK----YDI--KE-AAVVGDRLSDINAAKDNGLIA 423 (459)
T ss_pred Hh----cCc--ce-EEEEeCCHHHHHHHHHCCCeE
Confidence 22 222 22 568889999999999999953
No 384
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=47.45 E-value=31 Score=41.22 Aligned_cols=60 Identities=12% Similarity=0.073 Sum_probs=40.8
Q ss_pred CCCeEEEEecCCccccCCccccccccc---CcCCcchhHHHHHHHHHHC-CceEEEEccCcccchHHHHHHHH
Q psy12533 356 WNDKIVISDIDGTITKSDVLGHVLPIM---GKDWAQNGVTRLFTKIKEN-GYKLLYLSARAIGQSRVTREYLQ 424 (567)
Q Consensus 356 ~~~kiVIsDIDGTiTkSD~~G~~~~~~---GkDw~h~Gva~l~~~i~~n-GY~iiYLSaRpi~qa~~Tr~~L~ 424 (567)
....++++|.||||+-- .+.. ..-.+++++.++.+.+.+. +-.+.-+|||+...- ..|+.
T Consensus 505 a~~rll~LDyDGTL~~~------~~~~~~p~~a~p~~~l~~~L~~L~~d~~~~V~IvSGR~~~~L---~~~~~ 568 (797)
T PLN03063 505 SNNRLLILGFYGTLTEP------RNSQIKEMDLGLHPELKETLKALCSDPKTTVVVLSRSGKDIL---DKNFG 568 (797)
T ss_pred ccCeEEEEecCccccCC------CCCccccccCCCCHHHHHHHHHHHcCCCCEEEEEeCCCHHHH---HHHhC
Confidence 34578999999999932 1111 1113678899999998876 677777999976443 55554
No 385
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=47.42 E-value=30 Score=41.38 Aligned_cols=59 Identities=12% Similarity=0.097 Sum_probs=41.1
Q ss_pred CCcEEEEecCCccccCCccccccccc---cccccchhHHHHHHHHHHC-CceEEEEccCcccchHHHHHHHH
Q psy12533 82 NDKIVISDIDGTITKSDVLGHVLPIM---GKDWAQNGVTRLFTKIKEN-GYKLLYLSARAIGQSRVTREYLQ 149 (567)
Q Consensus 82 ~~kiVISDIDGTITkSD~lG~il~~l---GkDwth~GVa~Ly~~i~~n-GY~ilYLSaRpi~~a~~Tr~~L~ 149 (567)
..+++++|.||||+.- .+.. ....+.+++.++.+.+.+. +..+.-+|+|+... ...|+.
T Consensus 506 ~~rll~LDyDGTL~~~------~~~~~~p~~a~p~~~l~~~L~~L~~d~~~~V~IvSGR~~~~---L~~~~~ 568 (797)
T PLN03063 506 NNRLLILGFYGTLTEP------RNSQIKEMDLGLHPELKETLKALCSDPKTTVVVLSRSGKDI---LDKNFG 568 (797)
T ss_pred cCeEEEEecCccccCC------CCCccccccCCCCHHHHHHHHHHHcCCCCEEEEEeCCCHHH---HHHHhC
Confidence 4468999999999932 1111 1124677899999999876 67888899997644 356663
No 386
>PLN02399 phospholipid hydroperoxide glutathione peroxidase
Probab=47.16 E-value=88 Score=32.09 Aligned_cols=64 Identities=22% Similarity=0.427 Sum_probs=41.2
Q ss_pred EEEEecCC-ccccCCccccc-cccccccccch------hHHHHHHHHHHCCceEEEEccCcc-----cchHHHHHHH
Q psy12533 85 IVISDIDG-TITKSDVLGHV-LPIMGKDWAQN------GVTRLFTKIKENGYKLLYLSARAI-----GQSRVTREYL 148 (567)
Q Consensus 85 iVISDIDG-TITkSD~lG~i-l~~lGkDwth~------GVa~Ly~~i~~nGY~ilYLSaRpi-----~~a~~Tr~~L 148 (567)
.-+-|+|| +++.++..|.. +-.+...|.-+ ...+|+.+++++|..|+-++.... .-.+..++|+
T Consensus 82 F~l~d~~G~~vsLsd~kGK~vvl~FwAswCp~c~~e~p~L~~L~~~~~~~Gv~VIgV~~d~~~~~e~~s~~ei~~f~ 158 (236)
T PLN02399 82 FTVKDIDGKDVALSKFKGKVLLIVNVASKCGLTSSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKQFA 158 (236)
T ss_pred eEEECCCCCEEeHHHhCCCeEEEEEEcCCCcchHHHHHHHHHHHHHHhcCCcEEEEEecccccccCCCCHHHHHHHH
Confidence 45568898 46778877864 22222445433 556789999999999999996432 2234456665
No 387
>TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245. This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD.
Probab=46.96 E-value=49 Score=32.97 Aligned_cols=57 Identities=21% Similarity=0.267 Sum_probs=41.2
Q ss_pred eCCCeEEEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHCCceEEEEccCcccch
Q psy12533 355 RWNDKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQS 416 (567)
Q Consensus 355 ~~~~kiVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa 416 (567)
..+.|++|-|+||||-.+-... .-+.-.-+||+-++.+.+.+ .|.|+--||.....+
T Consensus 18 ~~~kklLVLDLDeTLvh~~~~~----~~~~~~kRP~l~eFL~~~~~-~feIvVwTAa~~~ya 74 (195)
T TIGR02245 18 REGKKLLVLDIDYTLFDHRSPA----ETGEELMRPYLHEFLTSAYE-DYDIVIWSATSMKWI 74 (195)
T ss_pred CCCCcEEEEeCCCceEcccccC----CCceEEeCCCHHHHHHHHHh-CCEEEEEecCCHHHH
Confidence 3566899999999999542111 12334589999999999998 599998888654333
No 388
>TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245. This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD.
Probab=46.96 E-value=51 Score=32.87 Aligned_cols=58 Identities=21% Similarity=0.265 Sum_probs=42.2
Q ss_pred cCCCcEEEEecCCccccCCccccccccccccccchhHHHHHHHHHHCCceEEEEccCcccchH
Q psy12533 80 RWNDKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSR 142 (567)
Q Consensus 80 ~~~~kiVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~ 142 (567)
..+.|++|-|+||||..+-... .-+.-.-+||+-++.+.+.+ .|.|+--||.....++
T Consensus 18 ~~~kklLVLDLDeTLvh~~~~~----~~~~~~kRP~l~eFL~~~~~-~feIvVwTAa~~~ya~ 75 (195)
T TIGR02245 18 REGKKLLVLDIDYTLFDHRSPA----ETGEELMRPYLHEFLTSAYE-DYDIVIWSATSMKWIE 75 (195)
T ss_pred CCCCcEEEEeCCCceEcccccC----CCceEEeCCCHHHHHHHHHh-CCEEEEEecCCHHHHH
Confidence 3456799999999999542111 12345689999999999999 5999988886544443
No 389
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=46.52 E-value=73 Score=38.75 Aligned_cols=105 Identities=15% Similarity=0.160 Sum_probs=67.7
Q ss_pred ccccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCC-------Cchhhhhhh-hhhc
Q psy12533 109 KDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNP-------TSLLNAFHT-EVIE 180 (567)
Q Consensus 109 kDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GPlllsp-------~~l~~al~R-Evi~ 180 (567)
.|-.++++.+..+.+++.|.+++-+|+-...-|.. --+. .++..+.++.-. +.+...+.+ +|..
T Consensus 548 ~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~---IA~~-----lGI~~~~v~~G~el~~l~~~el~~~~~~~~VfA 619 (902)
T PRK10517 548 LDPPKETTAPALKALKASGVTVKILTGDSELVAAK---VCHE-----VGLDAGEVLIGSDIETLSDDELANLAERTTLFA 619 (902)
T ss_pred hCcchhhHHHHHHHHHHCCCEEEEEcCCCHHHHHH---HHHH-----cCCCccCceeHHHHHhCCHHHHHHHHhhCcEEE
Confidence 68899999999999999999999999965544422 2223 445433333211 111111111 2333
Q ss_pred cChhHHHHHHHHHHHHhCCCCCCCEEEecCCcccchhhhhhc--CCCC
Q psy12533 181 KKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAV--GIPL 226 (567)
Q Consensus 181 k~p~~fKi~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~v--GIp~ 226 (567)
+-.-+.|.++++.+++. .-.+|--|+..||+-|-+++ ||..
T Consensus 620 r~sPe~K~~IV~~Lq~~-----G~vVam~GDGvNDaPALk~ADVGIAm 662 (902)
T PRK10517 620 RLTPMHKERIVTLLKRE-----GHVVGFMGDGINDAPALRAADIGISV 662 (902)
T ss_pred EcCHHHHHHHHHHHHHC-----CCEEEEECCCcchHHHHHhCCEEEEe
Confidence 33335699999998874 23588899999998888874 6544
No 390
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase. This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.
Probab=45.86 E-value=60 Score=39.97 Aligned_cols=29 Identities=24% Similarity=0.405 Sum_probs=26.8
Q ss_pred ccccchhHHHHHHHHHHCCceEEEEccCc
Q psy12533 109 KDWAQNGVTRLFTKIKENGYKLLYLSARA 137 (567)
Q Consensus 109 kDwth~GVa~Ly~~i~~nGY~ilYLSaRp 137 (567)
+|-.++||.+..+.+++.|.++.-|||-.
T Consensus 629 eD~lq~~v~etI~~L~~AGIkv~mlTGD~ 657 (1057)
T TIGR01652 629 EDKLQEGVPETIELLRQAGIKIWVLTGDK 657 (1057)
T ss_pred hhhhhhccHHHHHHHHHCCCeEEEEcCCc
Confidence 68899999999999999999999999853
No 391
>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.
Probab=45.47 E-value=85 Score=38.88 Aligned_cols=103 Identities=19% Similarity=0.269 Sum_probs=66.7
Q ss_pred ccccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCC-----------ceecCCCchhhhhhhh
Q psy12533 109 KDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEG-----------PMLLNPTSLLNAFHTE 177 (567)
Q Consensus 109 kDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~G-----------Plllsp~~l~~al~RE 177 (567)
.|-.++++.+..+.+++.|.+++-+|+....-|..... . .++... -..++... +..+..+
T Consensus 644 ~Dp~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~---~-----~Gi~~~~~~~~~~~~~~~~vitG~~-l~~l~~~ 714 (1053)
T TIGR01523 644 YDPPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQ---E-----VGIIPPNFIHDRDEIMDSMVMTGSQ-FDALSDE 714 (1053)
T ss_pred ecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHH---H-----cCCCCccccccccccccceeeehHH-hhhcCHH
Confidence 67889999999999999999999999987665543332 2 333211 01111111 1111111
Q ss_pred ----------hhccChhHHHHHHHHHHHHhCCCCCCCEEEecCCcccchhhhhhc--CCC
Q psy12533 178 ----------VIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAV--GIP 225 (567)
Q Consensus 178 ----------vi~k~p~~fKi~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~v--GIp 225 (567)
|..+-.-+.|.++++.+++. .-.++..|+..+|+-|-+++ ||.
T Consensus 715 ~l~~~~~~~~V~ar~sP~~K~~iV~~lq~~-----g~~Vam~GDGvNDapaLk~AdVGIA 769 (1053)
T TIGR01523 715 EVDDLKALCLVIARCAPQTKVKMIEALHRR-----KAFCAMTGDGVNDSPSLKMANVGIA 769 (1053)
T ss_pred HHHHHhhcCeEEEecCHHHHHHHHHHHHhc-----CCeeEEeCCCcchHHHHHhCCccEe
Confidence 22333335699998888875 23588999999999999886 554
No 392
>TIGR00385 dsbE periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily. Involved in the biogenesis of c-type cytochromes as well as in disulfide bond formation in some periplasmic proteins.
Probab=44.84 E-value=1.1e+02 Score=29.08 Aligned_cols=40 Identities=10% Similarity=0.332 Sum_probs=23.0
Q ss_pred cCCcch--hHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHh
Q psy12533 384 KDWAQN--GVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQS 425 (567)
Q Consensus 384 kDw~h~--Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~ 425 (567)
.+|..+ -....++++.+.|+.++.++.... ....++|++.
T Consensus 72 a~wC~~C~~~~p~l~~l~~~~~~vi~V~~~~~--~~~~~~~~~~ 113 (173)
T TIGR00385 72 ASWCPPCRAEHPYLNELAKDGLPIVGVDYKDQ--SQNALKFLKE 113 (173)
T ss_pred CCcCHHHHHHHHHHHHHHHcCCEEEEEECCCC--hHHHHHHHHH
Confidence 456432 222345667778899999985422 2334566655
No 393
>PLN02811 hydrolase
Probab=44.49 E-value=53 Score=32.13 Aligned_cols=98 Identities=13% Similarity=0.187 Sum_probs=54.2
Q ss_pred cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCC-ccCCCCceecCCCchhhhhhhhhh--ccChhHHHH
Q psy12533 112 AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQED-LTLPEGPMLLNPTSLLNAFHTEVI--EKKPQEFKI 188 (567)
Q Consensus 112 th~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~-~~LP~GPlllsp~~l~~al~REvi--~k~p~~fKi 188 (567)
..+||.++.+.++++||++.-+|+.+.... +...+.. .+ ..+.. .++ +.+ -.++. .++|+.|..
T Consensus 79 l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~--~~~~~~~---~~l~~~f~-~i~-~~~------~~~~~~~KP~p~~~~~ 145 (220)
T PLN02811 79 LMPGAERLVRHLHAKGIPIAIATGSHKRHF--DLKTQRH---GELFSLMH-HVV-TGD------DPEVKQGKPAPDIFLA 145 (220)
T ss_pred CCccHHHHHHHHHHCCCcEEEEeCCchhhH--HHHHccc---HHHHhhCC-EEE-ECC------hhhccCCCCCcHHHHH
Confidence 358999999999999999999998654322 1111110 00 11111 122 222 01222 334445544
Q ss_pred HHHHHHHH-hCCCCCCCEEEecCCcccchhhhhhcCCCC
Q psy12533 189 SCLRDIMA-LFPPNTQPFYAGYGNKVNDVWSYQAVGIPL 226 (567)
Q Consensus 189 ~~L~~i~~-lf~~~~~pf~agfGNr~tDv~aY~~vGIp~ 226 (567)
++ +++.. -+.+ . =+..+|++..|+.|=+++|++.
T Consensus 146 a~-~~~~~~~~~~-~--~~v~IgDs~~di~aA~~aG~~~ 180 (220)
T PLN02811 146 AA-RRFEDGPVDP-G--KVLVFEDAPSGVEAAKNAGMSV 180 (220)
T ss_pred HH-HHhCCCCCCc-c--ceEEEeccHhhHHHHHHCCCeE
Confidence 43 22210 0111 1 1567899999999999999964
No 394
>TIGR03137 AhpC peroxiredoxin. This gene contains two invariant cysteine residues, one near the N-terminus and one near the C-terminus, each followed immediately by a proline residue.
Probab=44.45 E-value=68 Score=31.05 Aligned_cols=54 Identities=17% Similarity=0.303 Sum_probs=32.6
Q ss_pred cccCCccccc--ccccCcCCcc------hhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHh
Q psy12533 369 ITKSDVLGHV--LPIMGKDWAQ------NGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQS 425 (567)
Q Consensus 369 iTkSD~~G~~--~~~~GkDw~h------~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~ 425 (567)
++.++..|.. +...-.+|+. +..++++.++++.|.+++-+|.-+. ...+.|...
T Consensus 24 ~sl~d~~Gk~vvl~F~p~~~cp~C~~el~~l~~~~~~~~~~gv~vi~VS~D~~---~~~~~~~~~ 85 (187)
T TIGR03137 24 VTDEDVKGKWSVFFFYPADFTFVCPTELEDLADKYAELKKLGVEVYSVSTDTH---FVHKAWHDT 85 (187)
T ss_pred ecHHHHCCCEEEEEEECCCcCCcCHHHHHHHHHHHHHHHhcCCcEEEEeCCCH---HHHHHHHhh
Confidence 5556666642 2122145543 2556778888889999999997653 233555443
No 395
>KOG2882|consensus
Probab=44.25 E-value=41 Score=35.93 Aligned_cols=59 Identities=14% Similarity=0.318 Sum_probs=45.6
Q ss_pred eEEEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCcc
Q psy12533 359 KIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLT 432 (567)
Q Consensus 359 kiVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~ 432 (567)
..||||-||-+..- .+ .-||+++.++.+++.|=+++++|--+..-. ++|++..+..|++
T Consensus 23 DtfifDcDGVlW~g-----------~~-~ipGs~e~l~~L~~~gK~i~fvTNNStksr---~~y~kK~~~lG~~ 81 (306)
T KOG2882|consen 23 DTFIFDCDGVLWLG-----------EK-PIPGSPEALNLLKSLGKQIIFVTNNSTKSR---EQYMKKFAKLGFN 81 (306)
T ss_pred CEEEEcCCcceeec-----------CC-CCCChHHHHHHHHHcCCcEEEEeCCCcchH---HHHHHHHHHhCcc
Confidence 35999999988752 33 357999999999999999999998765433 6777776666655
No 396
>COG1225 Bcp Peroxiredoxin [Posttranslational modification, protein turnover, chaperones]
Probab=43.59 E-value=62 Score=31.38 Aligned_cols=63 Identities=24% Similarity=0.355 Sum_probs=44.6
Q ss_pred ecCC-ccccCCccccc--cccccccccch------hHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCC
Q psy12533 89 DIDG-TITKSDVLGHV--LPIMGKDWAQN------GVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLP 159 (567)
Q Consensus 89 DIDG-TITkSD~lG~i--l~~lGkDwth~------GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP 159 (567)
|.|| ||+.||.+|.- +-+-=+|+|-- +-.+++..+.+.|+.++=+|.-+.. ..+.|-+. ++||
T Consensus 17 ~~~g~~v~Lsd~~Gk~VVLyFYPk~~TpgCT~Ea~~Frd~~~ef~~~~a~V~GIS~Ds~~---~~~~F~~k-----~~L~ 88 (157)
T COG1225 17 DQDGETVSLSDLRGKPVVLYFYPKDFTPGCTTEACDFRDLLEEFEKLGAVVLGISPDSPK---SHKKFAEK-----HGLT 88 (157)
T ss_pred cCCCCEEehHHhcCCcEEEEECCCCCCCcchHHHHHHHHHHHHHHhCCCEEEEEeCCCHH---HHHHHHHH-----hCCC
Confidence 4556 78999999972 33334566543 4446788889999999999986554 34777777 7777
No 397
>PRK14010 potassium-transporting ATPase subunit B; Provisional
Probab=43.51 E-value=84 Score=37.10 Aligned_cols=87 Identities=21% Similarity=0.305 Sum_probs=63.8
Q ss_pred ccccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhcc-ChhHHH
Q psy12533 109 KDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEK-KPQEFK 187 (567)
Q Consensus 109 kDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GPlllsp~~l~~al~REvi~k-~p~~fK 187 (567)
+|-.++++.+.++.+++.|.+++-+|+-...-|....+ . .++.. .+ .+ .| +-|
T Consensus 439 ~Dp~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~---e-----lGI~~---------v~--------A~~~P-edK 492 (673)
T PRK14010 439 KDVIKDGLVERFRELREMGIETVMCTGDNELTAATIAK---E-----AGVDR---------FV--------AECKP-EDK 492 (673)
T ss_pred ecCCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHH---H-----cCCce---------EE--------cCCCH-HHH
Confidence 78999999999999999999999999976655533322 2 34431 11 22 34 569
Q ss_pred HHHHHHHHHhCCCCCCCEEEecCCcccchhhhhhc--CCCC
Q psy12533 188 ISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAV--GIPL 226 (567)
Q Consensus 188 i~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~v--GIp~ 226 (567)
.+.++.+++. .-.+|--|+..||+-|-+++ ||..
T Consensus 493 ~~iV~~lQ~~-----G~~VaMtGDGvNDAPALa~ADVGIAM 528 (673)
T PRK14010 493 INVIREEQAK-----GHIVAMTGDGTNDAPALAEANVGLAM 528 (673)
T ss_pred HHHHHHHHhC-----CCEEEEECCChhhHHHHHhCCEEEEe
Confidence 9999998874 23588889999999988886 6544
No 398
>PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins.
Probab=43.38 E-value=75 Score=33.84 Aligned_cols=56 Identities=21% Similarity=0.350 Sum_probs=40.6
Q ss_pred cEEEEecCCccccCCccccccccccccccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHh
Q psy12533 84 KIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQS 150 (567)
Q Consensus 84 kiVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~ 150 (567)
.+||||+|.|+..+.-...+ ..+.|.+-.+.+++.|.-++-=| .|-++-.+.-|+.
T Consensus 123 hVIVfDlD~TLItd~~~v~I--------r~~~v~~sL~~Lk~~g~vLvLWS---yG~~eHV~~sl~~ 178 (297)
T PF05152_consen 123 HVIVFDLDSTLITDEGDVRI--------RDPAVYDSLRELKEQGCVLVLWS---YGNREHVRHSLKE 178 (297)
T ss_pred cEEEEECCCcccccCCcccc--------CChHHHHHHHHHHHcCCEEEEec---CCCHHHHHHHHHH
Confidence 39999999999987533222 34578888899999996444333 3677777888877
No 399
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=43.21 E-value=40 Score=41.18 Aligned_cols=64 Identities=11% Similarity=0.128 Sum_probs=42.4
Q ss_pred CCCeEEEEecCCccccCCcc-----cccccccCcCCcchhHHHHHHHHHHC-CceEEEEccCcccchHHHHHHHH
Q psy12533 356 WNDKIVISDIDGTITKSDVL-----GHVLPIMGKDWAQNGVTRLFTKIKEN-GYKLLYLSARAIGQSRVTREYLQ 424 (567)
Q Consensus 356 ~~~kiVIsDIDGTiTkSD~~-----G~~~~~~GkDw~h~Gva~l~~~i~~n-GY~iiYLSaRpi~qa~~Tr~~L~ 424 (567)
....++++|.||||+--.-. .++.++ .-.+++++.++.+.+.+. +..+.-+|||+.... ..|+.
T Consensus 589 a~~RLlfLDyDGTLap~~~~P~~~~~~~~~~--~a~p~p~l~~~L~~L~~dp~n~VaIVSGR~~~~L---e~~fg 658 (934)
T PLN03064 589 SNNRLLILGFNATLTEPVDTPGRRGDQIKEM--ELRLHPELKEPLRALCSDPKTTIVVLSGSDRSVL---DENFG 658 (934)
T ss_pred ccceEEEEecCceeccCCCCccccccccccc--ccCCCHHHHHHHHHHHhCCCCeEEEEeCCCHHHH---HHHhC
Confidence 35678999999999853100 011000 123678999999998875 778889999976554 55554
No 400
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=42.61 E-value=92 Score=37.96 Aligned_cols=104 Identities=13% Similarity=0.165 Sum_probs=68.2
Q ss_pred ccccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCC-CCceecCCCchhhhhh----h------h
Q psy12533 109 KDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLP-EGPMLLNPTSLLNAFH----T------E 177 (567)
Q Consensus 109 kDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP-~GPlllsp~~l~~al~----R------E 177 (567)
.|-.++++.+..+++++.|.+++-+|+....-|.....=+ ++. .+-..++...+ ..+. + .
T Consensus 577 ~Dplr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~iA~~~--------GI~~~~~~vi~G~~~-~~l~~~el~~~i~~~~ 647 (941)
T TIGR01517 577 KDPLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARNC--------GILTFGGLAMEGKEF-RRLVYEEMDPILPKLR 647 (941)
T ss_pred cCCCchhHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHc--------CCCCCCceEeeHHHh-hhCCHHHHHHHhccCe
Confidence 6889999999999999999999999998766654443333 332 11111111111 1111 1 1
Q ss_pred hhccChhHHHHHHHHHHHHhCCCCCCCEEEecCCcccchhhhhhc--CCCC
Q psy12533 178 VIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAV--GIPL 226 (567)
Q Consensus 178 vi~k~p~~fKi~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~v--GIp~ 226 (567)
|..+-.-+.|.++++.+++. ...+|.-|+..+|+-|-+++ ||..
T Consensus 648 Vfar~sPe~K~~iV~~lq~~-----g~vVam~GDGvNDapALk~AdVGIAm 693 (941)
T TIGR01517 648 VLARSSPLDKQLLVLMLKDM-----GEVVAVTGDGTNDAPALKLADVGFSM 693 (941)
T ss_pred EEEECCHHHHHHHHHHHHHC-----CCEEEEECCCCchHHHHHhCCcceec
Confidence 22333335699999998874 23689999999999999885 6643
No 401
>PHA02597 30.2 hypothetical protein; Provisional
Probab=42.60 E-value=47 Score=31.65 Aligned_cols=93 Identities=13% Similarity=0.186 Sum_probs=48.2
Q ss_pred chhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhccChhHHHHHHHH
Q psy12533 113 QNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLR 192 (567)
Q Consensus 113 h~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GPlllsp~~l~~al~REvi~k~p~~fKi~~L~ 192 (567)
.+|+.++.++++++ |+++.+|+.+..........+.. . ..+| + .+ +.... .+....+|+.|+.++
T Consensus 76 ~pG~~e~L~~L~~~-~~~~i~Tn~~~~~~~~~~~~~~l-~---~~f~-~-~f---~~i~~---~~~~~~kp~~~~~a~-- 140 (197)
T PHA02597 76 YDDALDVINKLKED-YDFVAVTALGDSIDALLNRQFNL-N---ALFP-G-AF---SEVLM---CGHDESKEKLFIKAK-- 140 (197)
T ss_pred CCCHHHHHHHHHhc-CCEEEEeCCccchhHHHHhhCCH-H---HhCC-C-cc---cEEEE---eccCcccHHHHHHHH--
Confidence 45888899999887 57777887554322211111100 0 1111 1 00 01110 011123454444333
Q ss_pred HHHHhCCCCCCCEEEecCCcccchhhhhhc--CCCC
Q psy12533 193 DIMALFPPNTQPFYAGYGNKVNDVWSYQAV--GIPL 226 (567)
Q Consensus 193 ~i~~lf~~~~~pf~agfGNr~tDv~aY~~v--GIp~ 226 (567)
..+.+ .- ..-+|++.+|+.+=+++ ||+.
T Consensus 141 ---~~~~~--~~-~v~vgDs~~di~aA~~a~~Gi~~ 170 (197)
T PHA02597 141 ---EKYGD--RV-VCFVDDLAHNLDAAHEALSQLPV 170 (197)
T ss_pred ---HHhCC--Cc-EEEeCCCHHHHHHHHHHHcCCcE
Confidence 33321 11 55899999999999998 9984
No 402
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=42.10 E-value=87 Score=30.99 Aligned_cols=105 Identities=24% Similarity=0.318 Sum_probs=67.3
Q ss_pred CCCeEEEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCC
Q psy12533 356 WNDKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPE 435 (567)
Q Consensus 356 ~~~kiVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~ 435 (567)
.+-|.||.|+|-||-.=|. .-.-|-+.+-+..++++|.+++-+|. .-......|.+. .++|
T Consensus 26 ~Gikgvi~DlDNTLv~wd~----------~~~tpe~~~W~~e~k~~gi~v~vvSN---n~e~RV~~~~~~-----l~v~- 86 (175)
T COG2179 26 HGIKGVILDLDNTLVPWDN----------PDATPELRAWLAELKEAGIKVVVVSN---NKESRVARAAEK-----LGVP- 86 (175)
T ss_pred cCCcEEEEeccCceecccC----------CCCCHHHHHHHHHHHhcCCEEEEEeC---CCHHHHHhhhhh-----cCCc-
Confidence 3445699999999986541 22445677888889999999999998 566777888887 6666
Q ss_pred CceecCCCchhhhhhhhhhccChhHHHHHH-HHHHHhhCCCCCCCEEEecCCC-cccHHhHHHcCC
Q psy12533 436 GPMLLNPTSLLNAFHTEVIEKKPQEFKISC-LRDIMALFPPNTQPFYAGYGNK-VNDVWSYQAVGI 499 (567)
Q Consensus 436 GPvl~spd~l~~al~rEvi~k~p~~fK~~~-L~~i~~lf~~~~~pf~agfGNr-~tDv~aY~~vGI 499 (567)
.++. .++|-..|+.- |+...- ++ .+ ++-.|++ -|||.+=..+|+
T Consensus 87 --------fi~~-------A~KP~~~~fr~Al~~m~l--~~-~~--vvmVGDqL~TDVlggnr~G~ 132 (175)
T COG2179 87 --------FIYR-------AKKPFGRAFRRALKEMNL--PP-EE--VVMVGDQLFTDVLGGNRAGM 132 (175)
T ss_pred --------eeec-------ccCccHHHHHHHHHHcCC--Ch-hH--EEEEcchhhhhhhcccccCc
Confidence 1222 34664444332 332221 11 22 3455665 478877777775
No 403
>PRK13191 putative peroxiredoxin; Provisional
Probab=41.56 E-value=1.5e+02 Score=29.61 Aligned_cols=129 Identities=13% Similarity=0.234 Sum_probs=71.5
Q ss_pred ecCCccccCC-ccccc--cccccccccch------hHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccC-CccC
Q psy12533 89 DIDGTITKSD-VLGHV--LPIMGKDWAQN------GVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQE-DLTL 158 (567)
Q Consensus 89 DIDGTITkSD-~lG~i--l~~lGkDwth~------GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~-~~~L 158 (567)
+.+|++..++ ..|.. +-..-.||+-. ..++++.+++++|.+++=+|..+. ..-+.|.+.+++. ++.+
T Consensus 20 ~~~G~~~l~~~~~GK~vvLff~pa~ftpvC~tEl~~l~~~~~ef~~~g~~VigvS~Ds~---~~h~aw~~~~~~~~~~~i 96 (215)
T PRK13191 20 TTHGKIKLPDDYKGRWFVLFSHPGDFTPVCTTEFYSFAKKYEEFKKLNTELIGLSVDSN---ISHIEWVMWIEKNLKVEV 96 (215)
T ss_pred cCCCCEEcHHHhCCCcEEEEEeCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEECCCH---HHHHHHHhhHHHhcCCCC
Confidence 3455555444 34531 21223455433 677889999999999999997654 2234566655542 3455
Q ss_pred CCCceecCCCchhhhhhhhhhccChhHHHHHHHHHHHHhCCCCCCCEEEecCCcccchhhhhhcCCCCCCEEEEcCCCce
Q psy12533 159 PEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLSRIFTINSRGEV 238 (567)
Q Consensus 159 P~GPlllsp~~l~~al~REvi~k~p~~fKi~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~~rIF~In~~g~~ 238 (567)
| =|++.-+++- +...|.- +.. + ..|.+.--.|+||++|.|
T Consensus 97 ~-fPllsD~~~~-----------------------ia~~ygv--------~~~---~-----~~~~~~r~tfIID~~G~I 136 (215)
T PRK13191 97 P-FPIIADPMGN-----------------------VAKRLGM--------IHA---E-----SSTATVRAVFIVDDKGTV 136 (215)
T ss_pred c-eEEEECCchH-----------------------HHHHcCC--------ccc---c-----cCCceeEEEEEECCCCEE
Confidence 4 3566554322 2222210 000 0 013345568999999999
Q ss_pred ecccccc--ccccHHhHHhhhhhc
Q psy12533 239 KHEMTQT--FQSTYSNMSYLVDQM 260 (567)
Q Consensus 239 ~~~~~~~--~~~sY~~l~~~vd~~ 260 (567)
++..... .-.++..+-+.+|.+
T Consensus 137 r~~~~~~~~~gr~~~eilr~l~al 160 (215)
T PRK13191 137 RLILYYPMEIGRNIDEILRAIRAL 160 (215)
T ss_pred EEEEecCCCCCCCHHHHHHHHHHh
Confidence 8864332 223566666667654
No 404
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=40.31 E-value=17 Score=35.14 Aligned_cols=18 Identities=33% Similarity=0.440 Sum_probs=14.8
Q ss_pred CCeEEEEecCCccccCCc
Q psy12533 357 NDKIVISDIDGTITKSDV 374 (567)
Q Consensus 357 ~~kiVIsDIDGTiTkSD~ 374 (567)
.-|+|+||+||||...+.
T Consensus 3 ~~k~i~FD~d~TL~d~~~ 20 (229)
T COG1011 3 MIKAILFDLDGTLLDFDS 20 (229)
T ss_pred ceeEEEEecCCcccccch
Confidence 357899999999988653
No 405
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=39.90 E-value=16 Score=35.22 Aligned_cols=18 Identities=33% Similarity=0.440 Sum_probs=14.9
Q ss_pred CCcEEEEecCCccccCCc
Q psy12533 82 NDKIVISDIDGTITKSDV 99 (567)
Q Consensus 82 ~~kiVISDIDGTITkSD~ 99 (567)
..|+|+||+||||...+.
T Consensus 3 ~~k~i~FD~d~TL~d~~~ 20 (229)
T COG1011 3 MIKAILFDLDGTLLDFDS 20 (229)
T ss_pred ceeEEEEecCCcccccch
Confidence 357899999999998754
No 406
>PRK03147 thiol-disulfide oxidoreductase; Provisional
Probab=39.30 E-value=2.1e+02 Score=26.40 Aligned_cols=35 Identities=14% Similarity=0.361 Sum_probs=23.3
Q ss_pred hhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHh
Q psy12533 114 NGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQS 150 (567)
Q Consensus 114 ~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~ 150 (567)
+.+.+++.++.+.|.+++-++.- ...+..++|++.
T Consensus 81 ~~l~~~~~~~~~~~~~vi~i~~d--~~~~~~~~~~~~ 115 (173)
T PRK03147 81 PYMNELYPKYKEKGVEIIAVNVD--ETELAVKNFVNR 115 (173)
T ss_pred HHHHHHHHHhhcCCeEEEEEEcC--CCHHHHHHHHHH
Confidence 36667788888888888888763 233455666655
No 407
>cd02968 SCO SCO (an acronym for Synthesis of Cytochrome c Oxidase) family; composed of proteins similar to Sco1, a membrane-anchored protein possessing a soluble domain with a TRX fold. Members of this family are required for the proper assembly of cytochrome c oxidase (COX). They contain a metal binding motif, typically CXXXC, which is located in a flexible loop. COX, the terminal enzyme in the respiratory chain, is imbedded in the inner mitochondrial membrane of all eukaryotes and in the plasma membrane of some prokaryotes. It is composed of two subunits, COX I and COX II. It has been proposed that Sco1 specifically delivers copper to the CuA site, a dinuclear copper center, of the COX II subunit. Mutations in human Sco1 and Sco2 cause fatal infantile hepatoencephalomyopathy and cardioencephalomyopathy, respectively. Both disorders are associated with severe COX deficiency in affected tissues. More recently, it has been argued that the redox sensitivity of the copper binding properti
Probab=39.16 E-value=86 Score=27.90 Aligned_cols=76 Identities=17% Similarity=0.323 Sum_probs=45.5
Q ss_pred EEEEecCC-ccccCCccccc--cccccccccch-------hHHHHHHHHHHCC---ceEEEEccCcc-cchHHHHHHHHh
Q psy12533 85 IVISDIDG-TITKSDVLGHV--LPIMGKDWAQN-------GVTRLFTKIKENG---YKLLYLSARAI-GQSRVTREYLQS 150 (567)
Q Consensus 85 iVISDIDG-TITkSD~lG~i--l~~lGkDwth~-------GVa~Ly~~i~~nG---Y~ilYLSaRpi-~~a~~Tr~~L~~ 150 (567)
..+-|.|| +++-++..|.. +-..+ .|..+ -..+++.+++++| ..|+.+|.-+. ...+..++|++.
T Consensus 5 f~l~~~~g~~~~l~~~~gk~~vl~f~~-~~C~~~C~~~l~~l~~~~~~~~~~~~~~v~~v~vs~d~~~d~~~~~~~~~~~ 83 (142)
T cd02968 5 FTLTDQDGRPVTLSDLKGKPVLVYFGY-THCPDVCPTTLANLAQALKQLGADGGDDVQVVFISVDPERDTPEVLKAYAKA 83 (142)
T ss_pred eEEEcCCCCEEchHHhCCCEEEEEEEc-CCCcccCHHHHHHHHHHHHHhhHhhcCceEEEEEEECCCCCCHHHHHHHHHH
Confidence 35567777 56656656653 22222 23221 3456777788876 99999998654 334566788877
Q ss_pred cccCCccCCCCceecCC
Q psy12533 151 VKQEDLTLPEGPMLLNP 167 (567)
Q Consensus 151 ~~q~~~~LP~GPlllsp 167 (567)
++ +..|++..+
T Consensus 84 -----~~-~~~~~l~~~ 94 (142)
T cd02968 84 -----FG-PGWIGLTGT 94 (142)
T ss_pred -----hC-CCcEEEECC
Confidence 43 456666544
No 408
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=39.09 E-value=1.1e+02 Score=30.42 Aligned_cols=104 Identities=25% Similarity=0.347 Sum_probs=65.9
Q ss_pred CCcEEEEecCCccccCCccccccccccccccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCC
Q psy12533 82 NDKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEG 161 (567)
Q Consensus 82 ~~kiVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~G 161 (567)
+-|.||.|+|-||..=|. .-.-+-+.+-+..++++|-+++-+|- +-......|.+. .++|
T Consensus 27 Gikgvi~DlDNTLv~wd~----------~~~tpe~~~W~~e~k~~gi~v~vvSN---n~e~RV~~~~~~-----l~v~-- 86 (175)
T COG2179 27 GIKGVILDLDNTLVPWDN----------PDATPELRAWLAELKEAGIKVVVVSN---NKESRVARAAEK-----LGVP-- 86 (175)
T ss_pred CCcEEEEeccCceecccC----------CCCCHHHHHHHHHHHhcCCEEEEEeC---CCHHHHHhhhhh-----cCCc--
Confidence 445699999999986542 22345677888899999999999987 556677788887 6676
Q ss_pred ceecCCCchhhhhhhhhhccChhHHHHHH-HHHHHHhCCCCCCCEEEecCCc-ccchhhhhhcCC
Q psy12533 162 PMLLNPTSLLNAFHTEVIEKKPQEFKISC-LRDIMALFPPNTQPFYAGYGNK-VNDVWSYQAVGI 224 (567)
Q Consensus 162 Plllsp~~l~~al~REvi~k~p~~fKi~~-L~~i~~lf~~~~~pf~agfGNr-~tDv~aY~~vGI 224 (567)
.+.. +++|-..|+.- |+.. ++ ++ .+ ++-.|++ -|||.+=...|+
T Consensus 87 -------fi~~-------A~KP~~~~fr~Al~~m-~l-~~-~~--vvmVGDqL~TDVlggnr~G~ 132 (175)
T COG2179 87 -------FIYR-------AKKPFGRAFRRALKEM-NL-PP-EE--VVMVGDQLFTDVLGGNRAGM 132 (175)
T ss_pred -------eeec-------ccCccHHHHHHHHHHc-CC-Ch-hH--EEEEcchhhhhhhcccccCc
Confidence 3332 44665544332 2221 11 21 12 3334443 578887777775
No 409
>PLN02499 glycerol-3-phosphate acyltransferase
Probab=39.04 E-value=16 Score=41.33 Aligned_cols=83 Identities=11% Similarity=0.156 Sum_probs=42.1
Q ss_pred HHHHHHCCceEEEEccCcccchHHHHHHHHh-cccCCccCCCCc-eecCCCchhhhhhhhhhccChhHHHHHHHHHHHhh
Q psy12533 395 FTKIKENGYKLLYLSARAIGQSRVTREYLQS-VKQEDLTLPEGP-MLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMAL 472 (567)
Q Consensus 395 ~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~-~~Q~~~~lP~GP-vl~spd~l~~al~rEvi~k~p~~fK~~~L~~i~~l 472 (567)
++.++..| +.+-+||-|..+. ..|++. +--+ .=-|. +-....+.+..+..++. -++-|.. .++++
T Consensus 102 ~~~~~~~g-~~vVVTAsPrvmV---EpFake~LG~D---~VvGTEL~v~~~G~~TG~~~G~n---~~ek~~~---rl~~~ 168 (498)
T PLN02499 102 WKVFSSCD-KRVVVTRMPRVMV---ERFAKEHLRAD---EVIGSELVVNRFGFATGFIRGTD---VDQSVAN---RVANL 168 (498)
T ss_pred HHHHHcCC-eEEEEeCCHHHHH---HHHHHHhcCCc---eEEeeeEEEeeccEEEEEEecCc---cHHHHHH---HHHHH
Confidence 33466788 8888998887654 666665 2111 00022 11221244444444331 1333344 44555
Q ss_pred CCCCCCCEEEecCCCcccHH
Q psy12533 473 FPPNTQPFYAGYGNKVNDVW 492 (567)
Q Consensus 473 f~~~~~pf~agfGNr~tDv~ 492 (567)
|.. ..| +.|+|++.+|-.
T Consensus 169 ~g~-~~~-~vg~~~~~~~~~ 186 (498)
T PLN02499 169 FVD-ERP-QLGLGRISASSS 186 (498)
T ss_pred hCc-cCc-eecccCCcccch
Confidence 643 344 679999876544
No 410
>PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins.
Probab=38.73 E-value=61 Score=34.52 Aligned_cols=58 Identities=19% Similarity=0.338 Sum_probs=40.5
Q ss_pred CeEEEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhc
Q psy12533 358 DKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSV 426 (567)
Q Consensus 358 ~kiVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~ 426 (567)
+.+||||+|-||-.+.-...+ ..+.|.+-++.++++|.-++-= +.|-++-.+.-|..+
T Consensus 122 phVIVfDlD~TLItd~~~v~I--------r~~~v~~sL~~Lk~~g~vLvLW---SyG~~eHV~~sl~~~ 179 (297)
T PF05152_consen 122 PHVIVFDLDSTLITDEGDVRI--------RDPAVYDSLRELKEQGCVLVLW---SYGNREHVRHSLKEL 179 (297)
T ss_pred CcEEEEECCCcccccCCcccc--------CChHHHHHHHHHHHcCCEEEEe---cCCCHHHHHHHHHHh
Confidence 458999999999987532222 3567889999999999633322 346667777777773
No 411
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase. This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.
Probab=38.64 E-value=1.1e+02 Score=37.72 Aligned_cols=28 Identities=25% Similarity=0.424 Sum_probs=26.6
Q ss_pred cCCcchhHHHHHHHHHHCCceEEEEccC
Q psy12533 384 KDWAQNGVTRLFTKIKENGYKLLYLSAR 411 (567)
Q Consensus 384 kDw~h~Gva~l~~~i~~nGY~iiYLSaR 411 (567)
+|..++||.+..+.+++.|.++.-|||-
T Consensus 629 eD~lq~~v~etI~~L~~AGIkv~mlTGD 656 (1057)
T TIGR01652 629 EDKLQEGVPETIELLRQAGIKIWVLTGD 656 (1057)
T ss_pred hhhhhhccHHHHHHHHHCCCeEEEEcCC
Confidence 6889999999999999999999999985
No 412
>PLN02499 glycerol-3-phosphate acyltransferase
Probab=38.46 E-value=17 Score=41.25 Aligned_cols=15 Identities=40% Similarity=0.725 Sum_probs=12.8
Q ss_pred cEEEEecCCcccc-CC
Q psy12533 84 KIVISDIDGTITK-SD 98 (567)
Q Consensus 84 kiVISDIDGTITk-SD 98 (567)
+.|+||+|||||+ .|
T Consensus 9 ~~~~fD~DGTLlrs~s 24 (498)
T PLN02499 9 YSVVSELEGTLLKDAD 24 (498)
T ss_pred ceEEEecccceecCCC
Confidence 4699999999999 44
No 413
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=38.40 E-value=56 Score=39.99 Aligned_cols=64 Identities=11% Similarity=0.130 Sum_probs=43.2
Q ss_pred CCcEEEEecCCccccCCc-----cccccccccccccchhHHHHHHHHHHC-CceEEEEccCcccchHHHHHHHHh
Q psy12533 82 NDKIVISDIDGTITKSDV-----LGHVLPIMGKDWAQNGVTRLFTKIKEN-GYKLLYLSARAIGQSRVTREYLQS 150 (567)
Q Consensus 82 ~~kiVISDIDGTITkSD~-----lG~il~~lGkDwth~GVa~Ly~~i~~n-GY~ilYLSaRpi~~a~~Tr~~L~~ 150 (567)
..+++++|.||||+.-.- ..++.++ ....++++.++.+.+.+. +..+.-+|+|+.... ..|+..
T Consensus 590 ~~RLlfLDyDGTLap~~~~P~~~~~~~~~~--~a~p~p~l~~~L~~L~~dp~n~VaIVSGR~~~~L---e~~fg~ 659 (934)
T PLN03064 590 NNRLLILGFNATLTEPVDTPGRRGDQIKEM--ELRLHPELKEPLRALCSDPKTTIVVLSGSDRSVL---DENFGE 659 (934)
T ss_pred cceEEEEecCceeccCCCCccccccccccc--ccCCCHHHHHHHHHHHhCCCCeEEEEeCCCHHHH---HHHhCC
Confidence 456899999999985311 0111100 234678999999999876 788999999987543 566643
No 414
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=38.05 E-value=1.4e+02 Score=33.24 Aligned_cols=83 Identities=14% Similarity=0.252 Sum_probs=61.0
Q ss_pred cCCcchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhccChhHHHH
Q psy12533 384 KDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKI 463 (567)
Q Consensus 384 kDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GPvl~spd~l~~al~rEvi~k~p~~fK~ 463 (567)
+|..++++.+....+++.|++++-+|+....-+......+ . + + .+-..+.|.
T Consensus 345 ~d~lr~~~~~~i~~l~~~gi~~~~ltGD~~~~a~~ia~~l-g-------i------------~--------~~~~p~~K~ 396 (499)
T TIGR01494 345 EDPLRDDAKETISELREAGIRVIMLTGDNVLTAKAIAKEL-G-------I------------F--------ARVTPEEKA 396 (499)
T ss_pred cCCCchhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHc-C-------c------------e--------eccCHHHHH
Confidence 6889999999999999999999999999887776666644 1 1 1 001225688
Q ss_pred HHHHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCC
Q psy12533 464 SCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGI 499 (567)
Q Consensus 464 ~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGI 499 (567)
++++.++. . + -..+.-|+-.+|+-|-++++|
T Consensus 397 ~~v~~l~~---~-g-~~v~~vGDg~nD~~al~~Adv 427 (499)
T TIGR01494 397 ALVEALQK---K-G-RVVAMTGDGVNDAPALKKADV 427 (499)
T ss_pred HHHHHHHH---C-C-CEEEEECCChhhHHHHHhCCC
Confidence 88888876 2 2 235777777899988887643
No 415
>KOG2134|consensus
Probab=37.62 E-value=36 Score=37.65 Aligned_cols=79 Identities=22% Similarity=0.388 Sum_probs=53.5
Q ss_pred eeCCCeEEEEecCCccccCCcccccccccCcCC--cchhHHHHHHHHHHCCceEEEEccC-----cccchHHHHHHHHhc
Q psy12533 354 WRWNDKIVISDIDGTITKSDVLGHVLPIMGKDW--AQNGVTRLFTKIKENGYKLLYLSAR-----AIGQSRVTREYLQSV 426 (567)
Q Consensus 354 w~~~~kiVIsDIDGTiTkSD~~G~~~~~~GkDw--~h~Gva~l~~~i~~nGY~iiYLSaR-----pi~qa~~Tr~~L~~~ 426 (567)
.+.+.|++.||.||||-+.+. |-+.+.---|| .++-+..=...+.++||+++.-|-- .-.-++.++.=...+
T Consensus 71 v~~~~K~i~FD~dgtlI~t~s-g~vf~~~~~dw~~l~~~vp~Klktl~~~g~~l~iftnq~~i~r~~~~~~~f~~Ki~~i 149 (422)
T KOG2134|consen 71 VNGGSKIIMFDYDGTLIDTKS-GKVFPKGSMDWRILFPEVPSKLKTLYQDGIKLFIFTNQNGIARGKLELEEFKKKIKAI 149 (422)
T ss_pred cCCCcceEEEecCCceeecCC-cceeeccCccceeeccccchhhhhhccCCeEEEEEecccccccCcchHHHHHHHHHHH
Confidence 567889999999999987653 55566666677 5666666667788899999987743 333444555444454
Q ss_pred ccCCccCC
Q psy12533 427 KQEDLTLP 434 (567)
Q Consensus 427 ~Q~~~~lP 434 (567)
..+ .++|
T Consensus 150 ~an-l~vP 156 (422)
T KOG2134|consen 150 VAN-LGVP 156 (422)
T ss_pred HHh-cCCc
Confidence 443 5555
No 416
>PF08534 Redoxin: Redoxin; InterPro: IPR013740 This redoxin domain is found in peroxiredoxin, thioredoxin and glutaredoxin proteins. Peroxiredoxins (Prxs) constitute a family of thiol peroxidases that reduce hydrogen peroxide, peroxinitrite, and hydroperoxides using a strictly conserved cysteine []. Chloroplast thioredoxin systems in plants regulate the enzymes involved in photosynthetic carbon assimilation []. It is thought that redoxins have a large role to play in anti-oxidant defence. Cadmium-sensitive proteins are also regulated via thioredoxin and glutaredoxin thiol redox systems [].; GO: 0016491 oxidoreductase activity; PDB: 2H30_A 1TP9_A 1Y25_A 1XVQ_A 2B1K_A 2G0F_A 2B1L_B 3K8N_A 1Z5Y_E 3OR5_A ....
Probab=37.55 E-value=2e+02 Score=25.88 Aligned_cols=59 Identities=25% Similarity=0.449 Sum_probs=38.6
Q ss_pred ecCC-ccccCCccccc--cccccccccc------hhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHh
Q psy12533 89 DIDG-TITKSDVLGHV--LPIMGKDWAQ------NGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQS 150 (567)
Q Consensus 89 DIDG-TITkSD~lG~i--l~~lGkDwth------~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~ 150 (567)
|.|| ++..++..|.. +-....-|.- +.+.+|+.+++++|..++.|++..... .++|++.
T Consensus 15 ~~~g~~~~l~~~~gk~~vv~f~~~~~Cp~C~~~~p~l~~l~~~~~~~~v~~v~v~~~~~~~---~~~~~~~ 82 (146)
T PF08534_consen 15 DLDGKPVSLSDFKGKPVVVNFWASAWCPPCRKELPYLNELQEKYKDKGVDVVGVSSDDDPP---VREFLKK 82 (146)
T ss_dssp ETTSEEEEGGGGTTSEEEEEEESTTTSHHHHHHHHHHHHHHHHHHTTTCEEEEEEESSSHH---HHHHHHH
T ss_pred cCCCCEecHHHhCCCeEEEEEEccCCCCcchhhhhhHHhhhhhhccCceEEEEecccCCHH---HHHHHHh
Confidence 4677 44455555653 2222222432 355788888899999999999876655 6778877
No 417
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=37.50 E-value=1.1e+02 Score=29.34 Aligned_cols=126 Identities=16% Similarity=0.270 Sum_probs=75.2
Q ss_pred EecCCccccCCccccccccccccccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCC
Q psy12533 88 SDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNP 167 (567)
Q Consensus 88 SDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GPlllsp 167 (567)
-++++||+.- |.+++ -|.+..+.+++. ..|.--|+--.+ .|..+.+. .++| -
T Consensus 19 ~~v~~tiatg---Gklf~---------ev~e~iqeL~d~-V~i~IASgDr~g-------sl~~lae~-~gi~-------~ 70 (152)
T COG4087 19 GKVLYTIATG---GKLFS---------EVSETIQELHDM-VDIYIASGDRKG-------SLVQLAEF-VGIP-------V 70 (152)
T ss_pred ceEEEEEccC---cEEcH---------hhHHHHHHHHHh-heEEEecCCcch-------HHHHHHHH-cCCc-------e
Confidence 4788999865 33332 355666667777 777777764433 33322221 4566 2
Q ss_pred CchhhhhhhhhhccChhHHHHHHHHHHHHhCCCCCCCEEEecCCcccchhhhhhcCCCCCCEEEEcCCCceecccccccc
Q psy12533 168 TSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLSRIFTINSRGEVKHEMTQTFQ 247 (567)
Q Consensus 168 ~~l~~al~REvi~k~p~~fKi~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~~rIF~In~~g~~~~~~~~~~~ 247 (567)
.+.|.. ...+-|...+++++. .+-++.+.||..||+.|-+++.+- |-+|.+.|.-.. ... .
T Consensus 71 ~rv~a~--------a~~e~K~~ii~eLkk-----~~~k~vmVGnGaND~laLr~ADlG---I~tiq~e~v~~r-~l~--~ 131 (152)
T COG4087 71 ERVFAG--------ADPEMKAKIIRELKK-----RYEKVVMVGNGANDILALREADLG---ICTIQQEGVPER-LLL--T 131 (152)
T ss_pred eeeecc--------cCHHHHHHHHHHhcC-----CCcEEEEecCCcchHHHhhhcccc---eEEeccCCcchH-HHh--h
Confidence 333322 223459999999886 356799999999999999998654 456776443322 111 1
Q ss_pred ccH--HhHHhhhhhc
Q psy12533 248 STY--SNMSYLVDQM 260 (567)
Q Consensus 248 ~sY--~~l~~~vd~~ 260 (567)
..+ ..+.|++|..
T Consensus 132 ADvvik~i~e~ldl~ 146 (152)
T COG4087 132 ADVVLKEIAEILDLL 146 (152)
T ss_pred chhhhhhHHHHHHHh
Confidence 222 5666766653
No 418
>cd02970 PRX_like2 Peroxiredoxin (PRX)-like 2 family; hypothetical proteins that show sequence similarity to PRXs. Members of this group contain a CXXC motif, similar to TRX. The second cysteine in the motif corresponds to the peroxidatic cysteine of PRX, however, these proteins do not contain the other two residues of the catalytic triad of PRX. PRXs confer a protective antioxidant role in cells through their peroxidase activity in which hydrogen peroxide, peroxynitrate, and organic hydroperoxides are reduced and detoxified using reducing equivalents derived from either thioredoxin, glutathione, trypanothione and AhpF. TRXs alter the redox state of target proteins by catalyzing the reduction of their disulfide bonds via the CXXC motif using reducing equivalents derived from either NADPH or ferredoxins.
Probab=37.44 E-value=2.2e+02 Score=25.28 Aligned_cols=48 Identities=17% Similarity=0.336 Sum_probs=33.5
Q ss_pred hHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchh
Q psy12533 115 GVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLL 171 (567)
Q Consensus 115 GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GPlllsp~~l~ 171 (567)
...+++.++++.|..++-+|.-.. +..+.|.+. +.+| -|++..+++-+
T Consensus 45 ~l~~~~~~~~~~~v~vv~V~~~~~---~~~~~~~~~-----~~~~-~p~~~D~~~~~ 92 (149)
T cd02970 45 ALSKLLPELDALGVELVAVGPESP---EKLEAFDKG-----KFLP-FPVYADPDRKL 92 (149)
T ss_pred HHHHHHHHHHhcCeEEEEEeCCCH---HHHHHHHHh-----cCCC-CeEEECCchhH
Confidence 566788888889999999986543 333466665 5564 57888776443
No 419
>PRK13189 peroxiredoxin; Provisional
Probab=37.11 E-value=1.7e+02 Score=29.49 Aligned_cols=129 Identities=15% Similarity=0.217 Sum_probs=70.3
Q ss_pred ecCCccccCCc-cccc--cccccccccch------hHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccC-CccC
Q psy12533 89 DIDGTITKSDV-LGHV--LPIMGKDWAQN------GVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQE-DLTL 158 (567)
Q Consensus 89 DIDGTITkSD~-lG~i--l~~lGkDwth~------GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~-~~~L 158 (567)
+++|+++.++. .|.. +-..-.||+-. ..++++.+.++.|.+++-+|.-+. ...+.|++.+.+. |..+
T Consensus 22 ~~~g~~~l~d~~~Gk~vvL~f~pa~fcpvC~tEl~~l~~~~~ef~~~~v~VigvS~D~~---~~h~aw~~~~~~~~g~~i 98 (222)
T PRK13189 22 TTHGPIKLPDDYKGKWFVLFSHPADFTPVCTTEFVAFQKRYDEFRELNTELIGLSIDQV---FSHIKWVEWIKEKLGVEI 98 (222)
T ss_pred cCCCCEeeHHHhCCCeEEEEEeCCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEECCCH---HHHHHHHHhHHHhcCcCc
Confidence 44566655553 5542 22233455543 556788889999999999986432 2345677665442 3334
Q ss_pred CCCceecCCCchhhhhhhhhhccChhHHHHHHHHHHHHhCCCCCCCEEEecCCcccchhhhhhcCCCCCCEEEEcCCCce
Q psy12533 159 PEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLSRIFTINSRGEV 238 (567)
Q Consensus 159 P~GPlllsp~~l~~al~REvi~k~p~~fKi~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~~rIF~In~~g~~ 238 (567)
| =|++.-+++- +...|.- . .... -|.+.-.+|+||++|.|
T Consensus 99 ~-fPllsD~~~~-----------------------ia~~ygv-~---~~~~------------~~~~~r~tfIID~~G~I 138 (222)
T PRK13189 99 E-FPIIADDRGE-----------------------IAKKLGM-I---SPGK------------GTNTVRAVFIIDPKGII 138 (222)
T ss_pred c-eeEEEcCccH-----------------------HHHHhCC-C---cccc------------CCCceeEEEEECCCCeE
Confidence 3 2455444321 1122210 0 0000 12234468999999999
Q ss_pred ecccccc--ccccHHhHHhhhhhc
Q psy12533 239 KHEMTQT--FQSTYSNMSYLVDQM 260 (567)
Q Consensus 239 ~~~~~~~--~~~sY~~l~~~vd~~ 260 (567)
++..... .-.++..+-.+++.+
T Consensus 139 r~~~~~~~~~gr~~~eilr~l~al 162 (222)
T PRK13189 139 RAILYYPQEVGRNMDEILRLVKAL 162 (222)
T ss_pred EEEEecCCCCCCCHHHHHHHHHHh
Confidence 8764321 224577777777754
No 420
>PRK10606 btuE putative glutathione peroxidase; Provisional
Probab=36.88 E-value=2.8e+02 Score=27.27 Aligned_cols=128 Identities=13% Similarity=0.207 Sum_probs=0.0
Q ss_pred EEecCC-ccccCCccccc-cccccccccch-----hHHHHHHHHHHCCceEEEEcc-----CcccchHHHHHHHH-hccc
Q psy12533 87 ISDIDG-TITKSDVLGHV-LPIMGKDWAQN-----GVTRLFTKIKENGYKLLYLSA-----RAIGQSRVTREYLQ-SVKQ 153 (567)
Q Consensus 87 ISDIDG-TITkSD~lG~i-l~~lGkDwth~-----GVa~Ly~~i~~nGY~ilYLSa-----Rpi~~a~~Tr~~L~-~~~q 153 (567)
+-|+|| +++-|+..|.. +-..-..|... +..+||+++++.|..|+-++. ....-.+..++|++ .
T Consensus 10 ~~~~~G~~v~Ls~~~GKvvLVvf~AS~C~~~~q~~~L~~L~~~y~~~gl~Vlg~p~nqf~~qe~~~~~ei~~f~~~~--- 86 (183)
T PRK10606 10 VTTIDGEVTTLEKYAGNVLLIVNVASKCGLTPQYEQLENIQKAWADQGFVVLGFPCNQFLGQEPGSDEEIKTYCRTT--- 86 (183)
T ss_pred eECCCCCEEeHHHhCCCEEEEEEEeCCCCCcHHHHHHHHHHHHHhhCCeEEEEeeccccccCCCCCHHHHHHHHHHc---
Q ss_pred CCccCCCCceecCCCchhhhhhhhhhccChhHHHHHHHHHHHHhCCCCCCCE--EEecCCcccchhhhhhcCCCCCC---
Q psy12533 154 EDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPF--YAGYGNKVNDVWSYQAVGIPLSR--- 228 (567)
Q Consensus 154 ~~~~LP~GPlllsp~~l~~al~REvi~k~p~~fKi~~L~~i~~lf~~~~~pf--~agfGNr~tDv~aY~~vGIp~~r--- 228 (567)
++++ ..-| +-.-|.....+..|.....|..-
T Consensus 87 --~g~~------------------------------------------Fpv~~k~dvnG~~~~pl~~~Lk~~~~~~~~~~ 122 (183)
T PRK10606 87 --WGVT------------------------------------------FPMFSKIEVNGEGRHPLYQKLIAAAPTAVAPE 122 (183)
T ss_pred --cCCC------------------------------------------ceeEEEEccCCCCCCHHHHHHHHhCCCCcCcc
Q ss_pred --------------------------EEEEcCCCceeccccccccccHHhHHhhhhhcC
Q psy12533 229 --------------------------IFTINSRGEVKHEMTQTFQSTYSNMSYLVDQMF 261 (567)
Q Consensus 229 --------------------------IF~In~~g~~~~~~~~~~~~sY~~l~~~vd~~f 261 (567)
-|.||++|+++........-.=..|.+.++.+.
T Consensus 123 ~~~~~~~~~~~~~~p~~~~~i~WNF~KFLv~~~G~vv~r~~~~~~p~~~~i~~~i~~~l 181 (183)
T PRK10606 123 ESGFYARMVSKGRAPLYPDDILWNFEKFLVGRDGQVIQRFSPDMTPEDPIVMESIKLAL 181 (183)
T ss_pred ccchhhhhhccccccccCCcccccCEEEEECCCCcEEEEECCCCCCCHHHHHHHHHHHh
No 421
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=36.75 E-value=1.3e+02 Score=28.97 Aligned_cols=126 Identities=16% Similarity=0.283 Sum_probs=74.7
Q ss_pred EecCCccccCCcccccccccCcCCcchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCC
Q psy12533 363 SDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNP 442 (567)
Q Consensus 363 sDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GPvl~sp 442 (567)
-++++||+.- |.++ +-|.+..+.+++. -.|.--||--.+- |..+.. -.++| -
T Consensus 19 ~~v~~tiatg---Gklf---------~ev~e~iqeL~d~-V~i~IASgDr~gs-------l~~lae-~~gi~-------~ 70 (152)
T COG4087 19 GKVLYTIATG---GKLF---------SEVSETIQELHDM-VDIYIASGDRKGS-------LVQLAE-FVGIP-------V 70 (152)
T ss_pred ceEEEEEccC---cEEc---------HhhHHHHHHHHHh-heEEEecCCcchH-------HHHHHH-HcCCc-------e
Confidence 4788999865 3333 2355666667777 6666666644433 322221 14566 3
Q ss_pred CchhhhhhhhhhccChhHHHHHHHHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCCCCCEEEEcCCCccccccccccc
Q psy12533 443 TSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLSRIFTINSRGEVKHEMTQTFQ 522 (567)
Q Consensus 443 d~l~~al~rEvi~k~p~~fK~~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~~rIF~In~~g~~~~~~~~~~~ 522 (567)
++.|..-+ .+-|...+++|+. .+-+..+.||-.||+.|-+++.+- |-+|.+.|.-.. .. ..
T Consensus 71 ~rv~a~a~--------~e~K~~ii~eLkk-----~~~k~vmVGnGaND~laLr~ADlG---I~tiq~e~v~~r-~l--~~ 131 (152)
T COG4087 71 ERVFAGAD--------PEMKAKIIRELKK-----RYEKVVMVGNGANDILALREADLG---ICTIQQEGVPER-LL--LT 131 (152)
T ss_pred eeeecccC--------HHHHHHHHHHhcC-----CCcEEEEecCCcchHHHhhhcccc---eEEeccCCcchH-HH--hh
Confidence 33332212 3459999999987 345688999999999999998664 457777443322 11 12
Q ss_pred ccH--hhHHhhhhhc
Q psy12533 523 STY--SNMSYLVDQM 535 (567)
Q Consensus 523 ~sY--~~l~~~vd~~ 535 (567)
..+ ..+.|++|..
T Consensus 132 ADvvik~i~e~ldl~ 146 (152)
T COG4087 132 ADVVLKEIAEILDLL 146 (152)
T ss_pred chhhhhhHHHHHHHh
Confidence 223 5666666643
No 422
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=36.68 E-value=1.1e+02 Score=36.53 Aligned_cols=106 Identities=22% Similarity=0.331 Sum_probs=68.0
Q ss_pred EEEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCcee
Q psy12533 360 IVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPML 439 (567)
Q Consensus 360 iVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GPvl 439 (567)
+|..-+||.+. |-|. =.|-.++.+.+..+++++.|++++-|||-...-++..-+=| ++-
T Consensus 519 ~v~va~dg~~~-----g~i~---~~D~~R~~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA~~l--------GId----- 577 (713)
T COG2217 519 VVFVAVDGKLV-----GVIA---LADELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKEL--------GID----- 577 (713)
T ss_pred EEEEEECCEEE-----EEEE---EeCCCChhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHc--------ChH-----
Confidence 67788888443 3331 27889999999999999999999999997665554433322 111
Q ss_pred cCCCchhhhhhhhhhccChhHHHHHHHHHHHhhCCCCCCCEEEecCCCcccHHhHH--HcCCCCCC
Q psy12533 440 LNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQ--AVGIPLSR 503 (567)
Q Consensus 440 ~spd~l~~al~rEvi~k~p~~fK~~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~--~vGIp~~r 503 (567)
.. +-|+ .| +=|.+..+.++. .+.. ++-.|+-.||.-|-. .|||..+.
T Consensus 578 ----~v----~Ael---lP-edK~~~V~~l~~----~g~~-VamVGDGINDAPALA~AdVGiAmG~ 626 (713)
T COG2217 578 ----EV----RAEL---LP-EDKAEIVRELQA----EGRK-VAMVGDGINDAPALAAADVGIAMGS 626 (713)
T ss_pred ----hh----eccC---Cc-HHHHHHHHHHHh----cCCE-EEEEeCCchhHHHHhhcCeeEeecC
Confidence 11 1111 23 338889999986 2332 566666667766554 46776544
No 423
>PF10307 DUF2410: Hypothetical protein (DUF2410); InterPro: IPR018812 This entry represents a family of proteins conserved in fungi whose function is not known. There are two characteristic sequence motifs, GGWW and TGR.
Probab=36.09 E-value=1.8e+02 Score=29.25 Aligned_cols=98 Identities=16% Similarity=0.254 Sum_probs=72.3
Q ss_pred cCCcchhHHHHHHH-HHHCCceEEEEccCcc-cchHHHHHHHHhcccCCccCCCCceecCCC-chhhhhhhhhhccChhH
Q psy12533 384 KDWAQNGVTRLFTK-IKENGYKLLYLSARAI-GQSRVTREYLQSVKQEDLTLPEGPMLLNPT-SLLNAFHTEVIEKKPQE 460 (567)
Q Consensus 384 kDw~h~Gva~l~~~-i~~nGY~iiYLSaRpi-~qa~~Tr~~L~~~~Q~~~~lP~GPvl~spd-~l~~al~rEvi~k~p~~ 460 (567)
++|=...|++|++. +++..-.-+-||||.. ..++..+.-|.. .+|--=-|.|-|. +- ....-.
T Consensus 52 ~gwWNe~Iv~la~~S~~~~dtltVLLTGR~e~~F~~lI~~ml~s-----~~L~Fd~v~LKp~~~~---------~~sTm~ 117 (197)
T PF10307_consen 52 EGWWNENIVELARLSMQDPDTLTVLLTGRRESKFSSLIERMLAS-----KGLEFDAVCLKPENQR---------FSSTMD 117 (197)
T ss_pred cchhhHHHHHHHHHhhcCCCeeEEEEeCCCchhHHHHHHHHHhc-----CCCCccEEEeCccccc---------CccccH
Confidence 45777789998875 7888899999999995 888888887766 5555444555554 11 123468
Q ss_pred HHHHHHHHHHhhCCCCCCCEEEecCCCcccHHhHHHc
Q psy12533 461 FKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAV 497 (567)
Q Consensus 461 fK~~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~v 497 (567)
||..+|.++..-++.-. - +.-|.+|..=+..++..
T Consensus 118 fK~~~l~~ll~~Y~~~~-e-I~IYeDR~~hvk~Fr~F 152 (197)
T PF10307_consen 118 FKQAFLEDLLHTYKNAE-E-IRIYEDRPKHVKGFRDF 152 (197)
T ss_pred HHHHHHHHHHHhcCCCC-E-EEEEcCCHHHHHHHHHH
Confidence 99999999999777422 2 35789999999988875
No 424
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=36.09 E-value=1.1e+02 Score=29.28 Aligned_cols=33 Identities=9% Similarity=0.213 Sum_probs=22.8
Q ss_pred hHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHh
Q psy12533 115 GVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQS 150 (567)
Q Consensus 115 GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~ 150 (567)
++.++.+.++++|+++.-+|+++...+ +..|+.
T Consensus 110 ~~~~~L~~l~~~g~~~~i~T~~~~~~~---~~~l~~ 142 (197)
T TIGR01548 110 TPKGLLRELHRAPKGMAVVTGRPRKDA---AKFLTT 142 (197)
T ss_pred CHHHHHHHHHHcCCcEEEECCCCHHHH---HHHHHH
Confidence 457788888888888888888765443 444444
No 425
>cd02970 PRX_like2 Peroxiredoxin (PRX)-like 2 family; hypothetical proteins that show sequence similarity to PRXs. Members of this group contain a CXXC motif, similar to TRX. The second cysteine in the motif corresponds to the peroxidatic cysteine of PRX, however, these proteins do not contain the other two residues of the catalytic triad of PRX. PRXs confer a protective antioxidant role in cells through their peroxidase activity in which hydrogen peroxide, peroxynitrate, and organic hydroperoxides are reduced and detoxified using reducing equivalents derived from either thioredoxin, glutathione, trypanothione and AhpF. TRXs alter the redox state of target proteins by catalyzing the reduction of their disulfide bonds via the CXXC motif using reducing equivalents derived from either NADPH or ferredoxins.
Probab=35.86 E-value=1.9e+02 Score=25.71 Aligned_cols=48 Identities=17% Similarity=0.336 Sum_probs=32.9
Q ss_pred hHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchh
Q psy12533 390 GVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLL 446 (567)
Q Consensus 390 Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GPvl~spd~l~ 446 (567)
...+++.++++.|..++-+|.-.. ...+.|.+. +++| -|++..+++-+
T Consensus 45 ~l~~~~~~~~~~~v~vv~V~~~~~---~~~~~~~~~-----~~~~-~p~~~D~~~~~ 92 (149)
T cd02970 45 ALSKLLPELDALGVELVAVGPESP---EKLEAFDKG-----KFLP-FPVYADPDRKL 92 (149)
T ss_pred HHHHHHHHHHhcCeEEEEEeCCCH---HHHHHHHHh-----cCCC-CeEEECCchhH
Confidence 556788888889999999986543 223466655 5564 57888776443
No 426
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=35.46 E-value=95 Score=36.83 Aligned_cols=84 Identities=18% Similarity=0.231 Sum_probs=60.7
Q ss_pred ccccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhccChhHHHH
Q psy12533 109 KDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKI 188 (567)
Q Consensus 109 kDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GPlllsp~~l~~al~REvi~k~p~~fKi 188 (567)
+|-.++|+.+..+.+++.|+++.-+|+....-+ +...+. .++. .. + .-.|+ -|.
T Consensus 566 ~d~~r~~a~~~i~~L~~~gi~~~llTGd~~~~a---~~ia~~-----lgi~---~~------~--------~~~p~-~K~ 619 (741)
T PRK11033 566 QDTLRADARQAISELKALGIKGVMLTGDNPRAA---AAIAGE-----LGID---FR------A--------GLLPE-DKV 619 (741)
T ss_pred ecCCchhHHHHHHHHHHCCCEEEEEcCCCHHHH---HHHHHH-----cCCC---ee------c--------CCCHH-HHH
Confidence 688899999999999999999999999766554 444444 3442 00 1 11344 488
Q ss_pred HHHHHHHHhCCCCCCCEEEecCCcccchhhhhhcCC
Q psy12533 189 SCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGI 224 (567)
Q Consensus 189 ~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGI 224 (567)
+.++.++.- . . ++-.|+..+|+.|-++++|
T Consensus 620 ~~v~~l~~~----~-~-v~mvGDgiNDapAl~~A~v 649 (741)
T PRK11033 620 KAVTELNQH----A-P-LAMVGDGINDAPAMKAASI 649 (741)
T ss_pred HHHHHHhcC----C-C-EEEEECCHHhHHHHHhCCe
Confidence 888887742 2 2 7788999999999888754
No 427
>cd06418 GH25_BacA-like BacA is a bacterial lysin from Enterococcus faecalis that degrades bacterial cell walls by catalyzing the hydrolysis of 1,4-beta-linkages between N-acetylmuramic acid and N-acetyl-D-glucosamine residues. BacA is homologous to the YbfG and YkuG lysins of Bacillus subtilis. BacA has a C-terminal catalytic glycosyl hydrolase family 25 (GH25) domain and an N-terminal peptidoglycan-binding domain comprised of three alpha helices which is similar to a domain found in matrixins.
Probab=35.41 E-value=28 Score=34.95 Aligned_cols=40 Identities=23% Similarity=0.422 Sum_probs=33.0
Q ss_pred HHHHHHHHCCceEE--EEccCccc--chHHHHHHHHhcccCCcc
Q psy12533 393 RLFTKIKENGYKLL--YLSARAIG--QSRVTREYLQSVKQEDLT 432 (567)
Q Consensus 393 ~l~~~i~~nGY~ii--YLSaRpi~--qa~~Tr~~L~~~~Q~~~~ 432 (567)
.....++..||+++ |||.++.. +...|+++++.|...|..
T Consensus 24 ~~a~~l~~~gy~~vgrYls~~~~~~~~k~lt~~e~~~i~~~Gl~ 67 (212)
T cd06418 24 ARAQTLKAAGYGIVGRYLTGSPGGCLSKNLTATELETITAAGLK 67 (212)
T ss_pred HHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCHHHHHHHHHCCCE
Confidence 45566899999987 99998776 889999999999886544
No 428
>KOG3189|consensus
Probab=35.39 E-value=39 Score=34.47 Aligned_cols=13 Identities=38% Similarity=0.756 Sum_probs=11.7
Q ss_pred EEEEecCCccccC
Q psy12533 360 IVISDIDGTITKS 372 (567)
Q Consensus 360 iVIsDIDGTiTkS 372 (567)
++.||+|||+|..
T Consensus 13 l~lfdvdgtLt~~ 25 (252)
T KOG3189|consen 13 LCLFDVDGTLTPP 25 (252)
T ss_pred EEEEecCCccccc
Confidence 5889999999976
No 429
>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....
Probab=35.10 E-value=1.6e+02 Score=28.02 Aligned_cols=99 Identities=14% Similarity=0.310 Sum_probs=57.7
Q ss_pred cCcC-CcchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhccChhH
Q psy12533 382 MGKD-WAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQE 460 (567)
Q Consensus 382 ~GkD-w~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GPvl~spd~l~~al~rEvi~k~p~~ 460 (567)
+|+. -..+...++.+.+++.|.++.|+++. ....+..++.+..+.++.-.+ .|-+++.. .+-.+ -..++.++.
T Consensus 31 ~~r~~~~~~~~~~~i~~l~~~g~~v~~~~~D-v~d~~~v~~~~~~~~~~~~~i-~gVih~ag-~~~~~---~~~~~t~~~ 104 (181)
T PF08659_consen 31 LGRSGAPSAEAEAAIRELESAGARVEYVQCD-VTDPEAVAAALAQLRQRFGPI-DGVIHAAG-VLADA---PIQDQTPDE 104 (181)
T ss_dssp EESSGGGSTTHHHHHHHHHHTT-EEEEEE---TTSHHHHHHHHHTSHTTSS-E-EEEEE--------B----GCC--HHH
T ss_pred eccCCCccHHHHHHHHHHHhCCCceeeeccC-ccCHHHHHHHHHHHHhccCCc-ceeeeeee-eeccc---ccccCCHHH
Confidence 3444 34566778999999999999999984 677778889998887754111 23333321 11111 112344566
Q ss_pred H------HHHHHHHHHhhCCCCCCCEEEecCC
Q psy12533 461 F------KISCLRDIMALFPPNTQPFYAGYGN 486 (567)
Q Consensus 461 f------K~~~L~~i~~lf~~~~~pf~agfGN 486 (567)
| |+.-+..|..+|......|+.-|.+
T Consensus 105 ~~~~~~~Kv~g~~~L~~~~~~~~l~~~i~~SS 136 (181)
T PF08659_consen 105 FDAVLAPKVRGLWNLHEALENRPLDFFILFSS 136 (181)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTTTSEEEEEEE
T ss_pred HHHHHhhhhhHHHHHHHHhhcCCCCeEEEECC
Confidence 6 7777777877776555566655554
No 430
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=34.57 E-value=1.4e+02 Score=37.02 Aligned_cols=36 Identities=3% Similarity=0.054 Sum_probs=31.3
Q ss_pred cCCcchhHHHHHHHHHHCCceEEEEccCcccchHHH
Q psy12533 384 KDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVT 419 (567)
Q Consensus 384 kDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~T 419 (567)
+|..++++.+....+++.|.+++-+||...--|..+
T Consensus 654 ~d~lr~~~~~~I~~l~~agi~v~miTGD~~~TA~~i 689 (1054)
T TIGR01657 654 ENPLKPDTKEVIKELKRASIRTVMITGDNPLTAVHV 689 (1054)
T ss_pred ecCCCccHHHHHHHHHHCCCeEEEECCCCHHHHHHH
Confidence 688999999999999999999999999976555443
No 431
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=33.82 E-value=86 Score=29.99 Aligned_cols=88 Identities=11% Similarity=0.158 Sum_probs=49.5
Q ss_pred chhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCC-CceecCCCchhhhhhhhhhccChhHHHHHHH
Q psy12533 388 QNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPE-GPMLLNPTSLLNAFHTEVIEKKPQEFKISCL 466 (567)
Q Consensus 388 h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~-GPvl~spd~l~~al~rEvi~k~p~~fK~~~L 466 (567)
.+++.++.+.++++|+++.-+|+++...+ +..|+. .++.. -..+++.+... ..++|+.|...+
T Consensus 108 ~~~~~~~L~~l~~~g~~~~i~T~~~~~~~---~~~l~~-----~gl~~~f~~~~~~~~~~-------~KP~p~~~~~~~- 171 (197)
T TIGR01548 108 LLTPKGLLRELHRAPKGMAVVTGRPRKDA---AKFLTT-----HGLEILFPVQIWMEDCP-------PKPNPEPLILAA- 171 (197)
T ss_pred ccCHHHHHHHHHHcCCcEEEECCCCHHHH---HHHHHH-----cCchhhCCEEEeecCCC-------CCcCHHHHHHHH-
Confidence 45678999999999999999999876554 444554 33321 01111121110 134556666543
Q ss_pred HHHHhhCCCCCCCEEEecCCCcccHHhHHH
Q psy12533 467 RDIMALFPPNTQPFYAGYGNKVNDVWSYQA 496 (567)
Q Consensus 467 ~~i~~lf~~~~~pf~agfGNr~tDv~aY~~ 496 (567)
+.+.- .+ ... .-+|++.+|+.|=++
T Consensus 172 ~~~~~--~~-~~~--i~vGD~~~Di~aA~~ 196 (197)
T TIGR01548 172 KALGV--EA-CHA--AMVGDTVDDIITGRK 196 (197)
T ss_pred HHhCc--Cc-ccE--EEEeCCHHHHHHHHh
Confidence 32211 11 233 457788899887443
No 432
>TIGR02540 gpx7 putative glutathione peroxidase Gpx7. This model represents one of several families of known and probable glutathione peroxidases. This family is restricted to animals and designated GPX7.
Probab=33.44 E-value=48 Score=30.63 Aligned_cols=70 Identities=16% Similarity=0.289 Sum_probs=41.5
Q ss_pred EecCC-ccccCCccccc-ccccCcCCc------chhHHHHHHHHHHCCceEEEEccCcc-----cchHHHHHHHHhcccC
Q psy12533 363 SDIDG-TITKSDVLGHV-LPIMGKDWA------QNGVTRLFTKIKENGYKLLYLSARAI-----GQSRVTREYLQSVKQE 429 (567)
Q Consensus 363 sDIDG-TiTkSD~~G~~-~~~~GkDw~------h~Gva~l~~~i~~nGY~iiYLSaRpi-----~qa~~Tr~~L~~~~Q~ 429 (567)
-|.|| |++.|+..|.. +-..-..|. .+...++++++.++|..|+-++.... .-.+..++|++. +.
T Consensus 8 ~~~~G~~~~l~~~~Gk~vvv~~~as~C~~c~~~~~~l~~l~~~~~~~~~~v~~i~~~~~~~~~~d~~~~~~~f~~~--~~ 85 (153)
T TIGR02540 8 KDARGRTVSLEKYRGKVSLVVNVASECGFTDQNYRALQELHRELGPSHFNVLAFPCNQFGESEPDSSKEIESFARR--NY 85 (153)
T ss_pred ECCCCCEecHHHhCCCEEEEEEeCCCCCchhhhHHHHHHHHHHHhhCCeEEEEEeccccccCCCCCHHHHHHHHHH--hc
Confidence 35666 56667777764 111223342 23455899999999999999986422 223456777652 12
Q ss_pred CccCC
Q psy12533 430 DLTLP 434 (567)
Q Consensus 430 ~~~lP 434 (567)
+..+|
T Consensus 86 ~~~fp 90 (153)
T TIGR02540 86 GVTFP 90 (153)
T ss_pred CCCCC
Confidence 45555
No 433
>PTZ00056 glutathione peroxidase; Provisional
Probab=33.33 E-value=58 Score=32.10 Aligned_cols=64 Identities=16% Similarity=0.292 Sum_probs=40.3
Q ss_pred EEecCCc-cccCCcccccc-cccCcCCc------chhHHHHHHHHHHCCceEEEEccCcc-----cchHHHHHHHHh
Q psy12533 362 ISDIDGT-ITKSDVLGHVL-PIMGKDWA------QNGVTRLFTKIKENGYKLLYLSARAI-----GQSRVTREYLQS 425 (567)
Q Consensus 362 IsDIDGT-iTkSD~~G~~~-~~~GkDw~------h~Gva~l~~~i~~nGY~iiYLSaRpi-----~qa~~Tr~~L~~ 425 (567)
+-|+||. ++.++..|..+ -..-..|. .|...+++++++++|+.|+-++.... .-.+..++|++.
T Consensus 24 l~d~~G~~vsL~~~kGkvvlv~fwAswC~~C~~e~p~L~~l~~~~~~~g~~vvgv~~~~~~~~e~d~~e~~~~f~~~ 100 (199)
T PTZ00056 24 VKTLEGTTVPMSSLKNKVLMITNSASKCGLTKKHVDQMNRLHSVFNPLGLEILAFPTSQFLNQEFPNTKDIRKFNDK 100 (199)
T ss_pred EECCCCCEEeHHHhCCCEEEEEEECCCCCChHHHHHHHHHHHHHHhcCceEEEEecchhccCCCCCCHHHHHHHHHH
Confidence 3456663 55566666541 11223442 34677899999999999999986421 234567888765
No 434
>COG1609 PurR Transcriptional regulators [Transcription]
Probab=32.50 E-value=2.9e+02 Score=29.18 Aligned_cols=52 Identities=13% Similarity=0.241 Sum_probs=39.2
Q ss_pred ccCcCCcchhHHHHHHHHHHCCce-EEEEccCc--ccchHHHHHHHHhcccCCccC
Q psy12533 381 IMGKDWAQNGVTRLFTKIKENGYK-LLYLSARA--IGQSRVTREYLQSVKQEDLTL 433 (567)
Q Consensus 381 ~~GkDw~h~Gva~l~~~i~~nGY~-iiYLSaRp--i~qa~~Tr~~L~~~~Q~~~~l 433 (567)
.++-| -..|...+..++-++||+ |.|+++.. ....+.-.+|...+.+.|..+
T Consensus 154 ~V~~D-n~~~~~~a~~~L~~~G~~~i~~i~~~~~~~~~~~R~~Gf~~al~~~~~~~ 208 (333)
T COG1609 154 SVGID-NFAGAYLATEHLIELGHRRIAFIGGPLDSSASRERLEGYRAALREAGLPI 208 (333)
T ss_pred EEEEC-hHHHHHHHHHHHHHCCCceEEEEeCCCccccHhHHHHHHHHHHHHCCCCC
Confidence 33444 355788899999999988 99999984 445677889999999955544
No 435
>KOG2134|consensus
Probab=31.82 E-value=49 Score=36.64 Aligned_cols=56 Identities=27% Similarity=0.469 Sum_probs=40.1
Q ss_pred ecCCCcEEEEecCCccccCCccccccccccccc--cchhHHHHHHHHHHCCceEEEEcc
Q psy12533 79 WRWNDKIVISDIDGTITKSDVLGHVLPIMGKDW--AQNGVTRLFTKIKENGYKLLYLSA 135 (567)
Q Consensus 79 w~~~~kiVISDIDGTITkSD~lG~il~~lGkDw--th~GVa~Ly~~i~~nGY~ilYLSa 135 (567)
.+.+.|++.||.||||.+.+. |-+.|.--.|| .++-|.+=...+.++||+++.-|-
T Consensus 71 v~~~~K~i~FD~dgtlI~t~s-g~vf~~~~~dw~~l~~~vp~Klktl~~~g~~l~iftn 128 (422)
T KOG2134|consen 71 VNGGSKIIMFDYDGTLIDTKS-GKVFPKGSMDWRILFPEVPSKLKTLYQDGIKLFIFTN 128 (422)
T ss_pred cCCCcceEEEecCCceeecCC-cceeeccCccceeeccccchhhhhhccCCeEEEEEec
Confidence 466788999999999987653 55556656675 344444445667888999997664
No 436
>KOG2882|consensus
Probab=31.37 E-value=85 Score=33.60 Aligned_cols=59 Identities=14% Similarity=0.333 Sum_probs=43.4
Q ss_pred cEEEEecCCccccCCccccccccccccccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCcc
Q psy12533 84 KIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLT 157 (567)
Q Consensus 84 kiVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~ 157 (567)
..||||-||-+..- .+ .-||+++..+.+++.|=+++++|--+. ..-++|++..+..|++
T Consensus 23 DtfifDcDGVlW~g-----------~~-~ipGs~e~l~~L~~~gK~i~fvTNNSt---ksr~~y~kK~~~lG~~ 81 (306)
T KOG2882|consen 23 DTFIFDCDGVLWLG-----------EK-PIPGSPEALNLLKSLGKQIIFVTNNST---KSREQYMKKFAKLGFN 81 (306)
T ss_pred CEEEEcCCcceeec-----------CC-CCCChHHHHHHHHHcCCcEEEEeCCCc---chHHHHHHHHHHhCcc
Confidence 35999999988752 22 357999999999999999999998443 2335677665555544
No 437
>COG1225 Bcp Peroxiredoxin [Posttranslational modification, protein turnover, chaperones]
Probab=31.25 E-value=1.1e+02 Score=29.84 Aligned_cols=63 Identities=24% Similarity=0.362 Sum_probs=42.8
Q ss_pred ecCC-ccccCCccccc--ccccCcCCcch------hHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCC
Q psy12533 364 DIDG-TITKSDVLGHV--LPIMGKDWAQN------GVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLP 434 (567)
Q Consensus 364 DIDG-TiTkSD~~G~~--~~~~GkDw~h~------Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP 434 (567)
|.|| ||+.||.+|.- +-.-=+|+|-- +--+.+..+.+.|+.++=+|.-+.... +.|.+. ++||
T Consensus 17 ~~~g~~v~Lsd~~Gk~VVLyFYPk~~TpgCT~Ea~~Frd~~~ef~~~~a~V~GIS~Ds~~~~---~~F~~k-----~~L~ 88 (157)
T COG1225 17 DQDGETVSLSDLRGKPVVLYFYPKDFTPGCTTEACDFRDLLEEFEKLGAVVLGISPDSPKSH---KKFAEK-----HGLT 88 (157)
T ss_pred cCCCCEEehHHhcCCcEEEEECCCCCCCcchHHHHHHHHHHHHHHhCCCEEEEEeCCCHHHH---HHHHHH-----hCCC
Confidence 4455 68889998872 22223455422 333677788999999999998776555 777777 7777
No 438
>COG1654 BirA Biotin operon repressor [Transcription]
Probab=30.26 E-value=46 Score=28.72 Aligned_cols=39 Identities=26% Similarity=0.432 Sum_probs=32.3
Q ss_pred cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCC
Q psy12533 112 AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPT 168 (567)
Q Consensus 112 th~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GPlllsp~ 168 (567)
++.-|-+.-+.+++.||.|. .+.++|+.||.+|.++.++
T Consensus 32 SRtaVwK~Iq~Lr~~G~~I~------------------s~~~kGY~L~~~~~ll~~~ 70 (79)
T COG1654 32 SRTAVWKHIQQLREEGVDIE------------------SVRGKGYLLPQLPDLLPQE 70 (79)
T ss_pred cHHHHHHHHHHHHHhCCceE------------------ecCCCceeccCccccCcHH
Confidence 46677888899999999998 6777899999999887654
No 439
>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....
Probab=30.09 E-value=2.3e+02 Score=26.97 Aligned_cols=99 Identities=14% Similarity=0.310 Sum_probs=56.8
Q ss_pred cccc-ccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhccChhH
Q psy12533 107 MGKD-WAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQE 185 (567)
Q Consensus 107 lGkD-wth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GPlllsp~~l~~al~REvi~k~p~~ 185 (567)
+|+. -..+...++.+.+++.|.++.|+++- +...+..+..+..+.++.-.+ .|-+++.. .+-.+ -..++.++.
T Consensus 31 ~~r~~~~~~~~~~~i~~l~~~g~~v~~~~~D-v~d~~~v~~~~~~~~~~~~~i-~gVih~ag-~~~~~---~~~~~t~~~ 104 (181)
T PF08659_consen 31 LGRSGAPSAEAEAAIRELESAGARVEYVQCD-VTDPEAVAAALAQLRQRFGPI-DGVIHAAG-VLADA---PIQDQTPDE 104 (181)
T ss_dssp EESSGGGSTTHHHHHHHHHHTT-EEEEEE---TTSHHHHHHHHHTSHTTSS-E-EEEEE--------B----GCC--HHH
T ss_pred eccCCCccHHHHHHHHHHHhCCCceeeeccC-ccCHHHHHHHHHHHHhccCCc-ceeeeeee-eeccc---ccccCCHHH
Confidence 4444 34556778999999999999999985 677778888998877754111 22233321 11111 122344555
Q ss_pred H------HHHHHHHHHHhCCCCCCCEEEecCC
Q psy12533 186 F------KISCLRDIMALFPPNTQPFYAGYGN 211 (567)
Q Consensus 186 f------Ki~~L~~i~~lf~~~~~pf~agfGN 211 (567)
| |+.-+..|..+|......|+.-|.+
T Consensus 105 ~~~~~~~Kv~g~~~L~~~~~~~~l~~~i~~SS 136 (181)
T PF08659_consen 105 FDAVLAPKVRGLWNLHEALENRPLDFFILFSS 136 (181)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTTTSEEEEEEE
T ss_pred HHHHHhhhhhHHHHHHHHhhcCCCCeEEEECC
Confidence 5 7777777777776545566666555
No 440
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=30.02 E-value=75 Score=39.36 Aligned_cols=56 Identities=13% Similarity=0.265 Sum_probs=41.4
Q ss_pred eCCCeEEE--EecCCccccCCcccccccccCcCCcchhHHHHHHHHHH----CCceEEEEccCcccchHHHHHHHHhccc
Q psy12533 355 RWNDKIVI--SDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKE----NGYKLLYLSARAIGQSRVTREYLQSVKQ 428 (567)
Q Consensus 355 ~~~~kiVI--sDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~----nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q 428 (567)
+.-.+++| +|||.| . | ....+.+++..++. ....|+|.|||++..+ ++.|..
T Consensus 767 ~~~~~~~via~D~d~~---~---~----------~~~~l~~~~~~~~~~~~~~~igfv~aTGR~l~~~---~~~l~~--- 824 (1050)
T TIGR02468 767 RRRKRLFVIAVDCYDD---K---D----------LLQIIKNIFEAVRKERMEGSSGFILSTSMTISEI---QSFLKS--- 824 (1050)
T ss_pred cccceEEEEEeccCCC---C---C----------hHHHHHHHHHHHhccccCCceEEEEEcCCCHHHH---HHHHHh---
Confidence 55577888 999999 2 1 24567788887762 2378999999998776 777777
Q ss_pred CCccCC
Q psy12533 429 EDLTLP 434 (567)
Q Consensus 429 ~~~~lP 434 (567)
++||
T Consensus 825 --~~lp 828 (1050)
T TIGR02468 825 --GGLN 828 (1050)
T ss_pred --CCCC
Confidence 7787
No 441
>KOG2914|consensus
Probab=29.88 E-value=2.5e+02 Score=28.63 Aligned_cols=99 Identities=11% Similarity=0.166 Sum_probs=62.6
Q ss_pred cchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCcee-cCCCchhhhhhhhhhccChhHHHHHH
Q psy12533 387 AQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPML-LNPTSLLNAFHTEVIEKKPQEFKISC 465 (567)
Q Consensus 387 ~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GPvl-~spd~l~~al~rEvi~k~p~~fK~~~ 465 (567)
..||+.+|+++++.+|-.+=-.|+++-...++--.|+..+-. .|. .+++ -.|+ + .+ ....|+.|=++.
T Consensus 93 ~~PGa~kLv~~L~~~gip~alat~s~~~~~~~k~~~~~~~~~---~f~-~~v~~d~~~-v----~~--gKP~Pdi~l~A~ 161 (222)
T KOG2914|consen 93 LMPGAEKLVNHLKNNGIPVALATSSTSASFELKISRHEDIFK---NFS-HVVLGDDPE-V----KN--GKPDPDIYLKAA 161 (222)
T ss_pred cCCcHHHHHHHHHhCCCCeeEEecCCcccHHHHHHHhhHHHH---hcC-CCeecCCcc-c----cC--CCCCchHHHHHH
Confidence 467999999999999999999999977777666666664322 122 1222 0111 0 11 145667775553
Q ss_pred HHHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCCC
Q psy12533 466 LRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPL 501 (567)
Q Consensus 466 L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~ 501 (567)
.+|+...--.+..|.+...=+.|=.++|.++
T Consensus 162 -----~~l~~~~~~k~lVfeds~~Gv~aa~aagm~v 192 (222)
T KOG2914|consen 162 -----KRLGVPPPSKCLVFEDSPVGVQAAKAAGMQV 192 (222)
T ss_pred -----HhcCCCCccceEEECCCHHHHHHHHhcCCeE
Confidence 2232212134678999999999999999864
No 442
>cd00340 GSH_Peroxidase Glutathione (GSH) peroxidase family; tetrameric selenoenzymes that catalyze the reduction of a variety of hydroperoxides including lipid peroxidases, using GSH as a specific electron donor substrate. GSH peroxidase contains one selenocysteine residue per subunit, which is involved in catalysis. Different isoenzymes are known in mammals,which are involved in protection against reactive oxygen species, redox regulation of many metabolic processes, peroxinitrite scavenging, and modulation of inflammatory processes.
Probab=29.84 E-value=3.5e+02 Score=24.86 Aligned_cols=63 Identities=25% Similarity=0.443 Sum_probs=37.1
Q ss_pred EecCC-ccccCCccccc-cccccccccc-----hhHHHHHHHHHHCCceEEEEccCcc-----cchHHHHHHHHh
Q psy12533 88 SDIDG-TITKSDVLGHV-LPIMGKDWAQ-----NGVTRLFTKIKENGYKLLYLSARAI-----GQSRVTREYLQS 150 (567)
Q Consensus 88 SDIDG-TITkSD~lG~i-l~~lGkDwth-----~GVa~Ly~~i~~nGY~ilYLSaRpi-----~~a~~Tr~~L~~ 150 (567)
-|.|| +++.++..|.. +-.+...|.- +...+|+++++++|..|+-+|.... ...+..++|++.
T Consensus 8 ~d~~G~~v~l~~~~Gk~vvl~fwatwC~C~~e~p~l~~l~~~~~~~~~~vv~v~~~~~~~~~~~~~~~~~~f~~~ 82 (152)
T cd00340 8 KDIDGEPVSLSKYKGKVLLIVNVASKCGFTPQYEGLEALYEKYKDRGLVVLGFPCNQFGGQEPGSNEEIKEFCET 82 (152)
T ss_pred ECCCCCEEeHHHhCCCEEEEEEEcCCCCchHHHHHHHHHHHHhcCCCEEEEEeccCccccCCCCCHHHHHHHHHH
Confidence 45666 45666666653 2112233321 2556788888888999999986431 223556777653
No 443
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=29.48 E-value=1.8e+02 Score=35.61 Aligned_cols=140 Identities=16% Similarity=0.232 Sum_probs=87.4
Q ss_pred ccccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCC-c--eecCCCchhhhhhh----h----
Q psy12533 109 KDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEG-P--MLLNPTSLLNAFHT----E---- 177 (567)
Q Consensus 109 kDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~G-P--lllsp~~l~~al~R----E---- 177 (567)
.|-.+++|.+....++++|-+++-+||-..--|...- +. +++... . +.+.... +..+.. |
T Consensus 545 ~Dppr~~v~~aI~~l~~AGI~v~MiTGD~~~TA~aIa---~~-----~Gi~~~~~~~~vi~G~e-l~~l~~~el~~~~~~ 615 (917)
T COG0474 545 EDPPREDVKEAIEELREAGIKVWMITGDHVETAIAIA---KE-----CGIEAEAESALVIDGAE-LDALSDEELAELVEE 615 (917)
T ss_pred cCCCCccHHHHHHHHHHCCCcEEEECCCCHHHHHHHH---HH-----cCCCCCCCceeEeehHH-hhhcCHHHHHHHhhh
Confidence 6899999999999999999999999997554442222 22 232221 1 1222221 122222 1
Q ss_pred --hhccChhHHHHHHHHHHHHhCCCCCCCEEEecCCcccchhhhhhc--CCCC-----------CCEEEEcCCCceeccc
Q psy12533 178 --VIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAV--GIPL-----------SRIFTINSRGEVKHEM 242 (567)
Q Consensus 178 --vi~k~p~~fKi~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~v--GIp~-----------~rIF~In~~g~~~~~~ 242 (567)
|..|=.-+.|..+.+.+++. .-++|.=|+..||+-|-+++ ||.. +.|+.++.+=..+...
T Consensus 616 ~~VfARvsP~qK~~IV~~lq~~-----g~vVamtGDGvNDapALk~ADVGIamg~~Gtdaak~Aadivl~dd~~~~i~~a 690 (917)
T COG0474 616 LSVFARVSPEQKARIVEALQKS-----GHVVAMTGDGVNDAPALKAADVGIAMGGEGTDAAKEAADIVLLDDNFATIVLA 690 (917)
T ss_pred CcEEEEcCHHHHHHHHHHHHhC-----CCEEEEeCCCchhHHHHHhcCccEEecccHHHHHHhhcceEeecCcHHHHHHH
Confidence 22333335699999999885 34689999999999999985 6632 4466666652222222
Q ss_pred cccccccHHhHHhhhhhcCC
Q psy12533 243 TQTFQSTYSNMSYLVDQMFP 262 (567)
Q Consensus 243 ~~~~~~sY~~l~~~vd~~fP 262 (567)
...-+..|..+...+-.+|.
T Consensus 691 v~eGR~~~~ni~k~i~~~l~ 710 (917)
T COG0474 691 VVEGRRVYVNIKKFILYLLS 710 (917)
T ss_pred HHHhHHHHHHHHHHHHHHHH
Confidence 22235677777777766654
No 444
>PF00578 AhpC-TSA: AhpC/TSA family; InterPro: IPR000866 Peroxiredoxins (Prxs) are a ubiquitous family of antioxidant enzymes that also control cytokine-induced peroxide levels which mediate signal transduction in mammalian cells. Prxs can be regulated by changes to phosphorylation, redox and possibly oligomerisation states. Prxs are divided into three classes: typical 2-Cys Prxs; atypical 2-Cys Prxs; and 1-Cys Prxs. All Prxs share the same basic catalytic mechanism, in which an active-site cysteine (the peroxidatic cysteine) is oxidised to a sulphenic acid by the peroxide substrate. The recycling of the sulphenic acid back to a thiol is what distinguishes the three enzyme classes. Using crystal structures, a detailed catalytic cycle has been derived for typical 2-Cys Prxs, including a model for the redox-regulated oligomeric state proposed to control enzyme activity []. Alkyl hydroperoxide reductase (AhpC) is responsible for directly reducing organic hyperoxides in its reduced dithiol form. Thiol specific antioxidant (TSA) is a physiologically important antioxidant which constitutes an enzymatic defence against sulphur-containing radicals. This family contains AhpC and TSA, as well as related proteins.; GO: 0016209 antioxidant activity, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1QMV_A 1PRX_B 3HJP_C 3HA9_A 2V41_G 2V32_C 2V2G_C 3LWA_A 3IA1_B 1ZYE_G ....
Probab=29.45 E-value=1.3e+02 Score=25.95 Aligned_cols=72 Identities=25% Similarity=0.459 Sum_probs=47.4
Q ss_pred EEecC-CccccCCccccc--ccccCcCCc------chhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCcc
Q psy12533 362 ISDID-GTITKSDVLGHV--LPIMGKDWA------QNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLT 432 (567)
Q Consensus 362 IsDID-GTiTkSD~~G~~--~~~~GkDw~------h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~ 432 (567)
.-|+| ++++.++..|.. +-.....|. .+...+++.+++++|++++-+|.-+.. ..++|++. ++
T Consensus 10 l~~~~g~~~~l~~l~gk~~vl~f~~~~~c~~c~~~l~~l~~~~~~~~~~~~~vi~is~d~~~---~~~~~~~~-----~~ 81 (124)
T PF00578_consen 10 LTDSDGKTVSLSDLKGKPVVLFFWPTAWCPFCQAELPELNELYKKYKDKGVQVIGISTDDPE---EIKQFLEE-----YG 81 (124)
T ss_dssp EETTTSEEEEGGGGTTSEEEEEEESTTTSHHHHHHHHHHHHHHHHHHTTTEEEEEEESSSHH---HHHHHHHH-----HT
T ss_pred eECCCCCEEEHHHHCCCcEEEEEeCccCccccccchhHHHHHhhhhccceEEeeeccccccc---chhhhhhh-----hc
Confidence 34666 456667776642 333344353 246778899999999999999996554 66888877 44
Q ss_pred CCCCceecCC
Q psy12533 433 LPEGPMLLNP 442 (567)
Q Consensus 433 lP~GPvl~sp 442 (567)
+ +-|++.-+
T Consensus 82 ~-~~~~~~D~ 90 (124)
T PF00578_consen 82 L-PFPVLSDP 90 (124)
T ss_dssp C-SSEEEEET
T ss_pred c-ccccccCc
Confidence 3 34566544
No 445
>PTZ00445 p36-lilke protein; Provisional
Probab=29.42 E-value=63 Score=33.06 Aligned_cols=60 Identities=17% Similarity=0.085 Sum_probs=41.4
Q ss_pred EecCCCcEEEEecCCccccCCcccccccc-cccc---ccchhHHHHHHHHHHCCceEEEEccCc
Q psy12533 78 KWRWNDKIVISDIDGTITKSDVLGHVLPI-MGKD---WAQNGVTRLFTKIKENGYKLLYLSARA 137 (567)
Q Consensus 78 lw~~~~kiVISDIDGTITkSD~lG~il~~-lGkD---wth~GVa~Ly~~i~~nGY~ilYLSaRp 137 (567)
|...+-|+|++|.|-||..-...|-.-|. -+.+ ...+..-.+..++++.|.+|+-+|=.+
T Consensus 38 L~~~GIk~Va~D~DnTlI~~HsgG~~~~~~~~~~~~~~~tpefk~~~~~l~~~~I~v~VVTfSd 101 (219)
T PTZ00445 38 LNECGIKVIASDFDLTMITKHSGGYIDPDNDDIRVLTSVTPDFKILGKRLKNSNIKISVVTFSD 101 (219)
T ss_pred HHHcCCeEEEecchhhhhhhhcccccCCCcchhhhhccCCHHHHHHHHHHHHCCCeEEEEEccc
Confidence 46778899999999998874444432222 1111 134557788999999999999988643
No 446
>PF13778 DUF4174: Domain of unknown function (DUF4174)
Probab=29.00 E-value=3.1e+02 Score=24.87 Aligned_cols=42 Identities=19% Similarity=0.152 Sum_probs=31.9
Q ss_pred HhHHHcCCCCCC--EEEEcCCCcccccccccccccHhhHHhhhhhc
Q psy12533 492 WSYQAVGIPLSR--IFTINSRGEVKHEMTQTFQSTYSNMSYLVDQM 535 (567)
Q Consensus 492 ~aY~~vGIp~~r--IF~In~~g~~~~~~~~~~~~sY~~l~~~vd~~ 535 (567)
..++..+++++. ++.||++|.++... ...-+-..|-+++|.|
T Consensus 68 ~lr~~l~~~~~~f~~vLiGKDG~vK~r~--~~p~~~~~lf~~ID~M 111 (118)
T PF13778_consen 68 ALRKRLRIPPGGFTVVLIGKDGGVKLRW--PEPIDPEELFDTIDAM 111 (118)
T ss_pred HHHHHhCCCCCceEEEEEeCCCcEEEec--CCCCCHHHHHHHHhCC
Confidence 556667888776 89999999998753 2334678888888877
No 447
>PRK13191 putative peroxiredoxin; Provisional
Probab=28.86 E-value=1.8e+02 Score=29.16 Aligned_cols=105 Identities=10% Similarity=0.206 Sum_probs=61.2
Q ss_pred chhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhccc-CCccCCCCceecCCCchhhhhhhhhhccChhHHHHHHH
Q psy12533 388 QNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQ-EDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCL 466 (567)
Q Consensus 388 h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q-~~~~lP~GPvl~spd~l~~al~rEvi~k~p~~fK~~~L 466 (567)
.+..++++.+++++|.+++=+|..+.- .-++|.+.+++ .++++| =|++..+++-
T Consensus 53 l~~l~~~~~ef~~~g~~VigvS~Ds~~---~h~aw~~~~~~~~~~~i~-fPllsD~~~~--------------------- 107 (215)
T PRK13191 53 FYSFAKKYEEFKKLNTELIGLSVDSNI---SHIEWVMWIEKNLKVEVP-FPIIADPMGN--------------------- 107 (215)
T ss_pred HHHHHHHHHHHHHCCCEEEEEECCCHH---HHHHHHhhHHHhcCCCCc-eEEEECCchH---------------------
Confidence 346778999999999999999976542 23566665554 234454 3566544321
Q ss_pred HHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCCCCCEEEEcCCCccccccccc--ccccHhhHHhhhhhc
Q psy12533 467 RDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLSRIFTINSRGEVKHEMTQT--FQSTYSNMSYLVDQM 535 (567)
Q Consensus 467 ~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~~rIF~In~~g~~~~~~~~~--~~~sY~~l~~~vd~~ 535 (567)
+...|+- +.. + ..|.+.--.|+||++|.|++..... .-.++..+-..+|.+
T Consensus 108 --ia~~ygv--------~~~---~-----~~~~~~r~tfIID~~G~Ir~~~~~~~~~gr~~~eilr~l~al 160 (215)
T PRK13191 108 --VAKRLGM--------IHA---E-----SSTATVRAVFIVDDKGTVRLILYYPMEIGRNIDEILRAIRAL 160 (215)
T ss_pred --HHHHcCC--------ccc---c-----cCCceeEEEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHHh
Confidence 1111110 000 0 0134555789999999998754322 234666666666654
No 448
>PF15577 Spc7_C2: Spc7_C2
Probab=28.25 E-value=1.1e+02 Score=25.33 Aligned_cols=48 Identities=25% Similarity=0.259 Sum_probs=33.1
Q ss_pred CCHHHHHhCcCCCCCceeEEEEEeccCC-cceeeeEEEEecCCCcE-EEEecCCcc
Q psy12533 41 LTSEQIAGLELRSGMNEVEFSVTTAYQG-TTRCKCYLFKWRWNDKI-VISDIDGTI 94 (567)
Q Consensus 41 lts~qL~~l~Lk~G~N~v~f~v~t~~qG-~~~~~~~iylw~~~~ki-VISDIDGTI 94 (567)
.-.+|+.+++++. +..+ .. -.+ ...+.+.+++.+-.+|+ |.++++|||
T Consensus 16 ~v~~~ir~l~~~f-Pt~v----~~-tsD~si~v~~slll~~l~tKvev~~~l~~si 65 (67)
T PF15577_consen 16 SVAEQIRRLNLTF-PTSV----TK-TSDSSIAVTVSLLLPPLRTKVEVVFSLPGSI 65 (67)
T ss_pred HHHHHHHhhheeC-cEEE----Ee-CCCceEEEEEEEEeccceeEEEEEEEeeeee
Confidence 4467888888765 2222 21 112 23677899999999997 999999965
No 449
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=28.07 E-value=2.5e+02 Score=31.29 Aligned_cols=83 Identities=16% Similarity=0.261 Sum_probs=60.1
Q ss_pred ccccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhccChhHHHH
Q psy12533 109 KDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKI 188 (567)
Q Consensus 109 kDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GPlllsp~~l~~al~REvi~k~p~~fKi 188 (567)
.|-.++++.+....+++.|++++-+|+....-+......+. + +. .-.| +.|.
T Consensus 345 ~d~lr~~~~~~i~~l~~~gi~~~~ltGD~~~~a~~ia~~lg--------i------------~~-------~~~p-~~K~ 396 (499)
T TIGR01494 345 EDPLRDDAKETISELREAGIRVIMLTGDNVLTAKAIAKELG--------I------------FA-------RVTP-EEKA 396 (499)
T ss_pred cCCCchhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcC--------c------------ee-------ccCH-HHHH
Confidence 67888999999999999999999999987766666655551 1 00 1122 4588
Q ss_pred HHHHHHHHhCCCCCCCEEEecCCcccchhhhhhcCC
Q psy12533 189 SCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGI 224 (567)
Q Consensus 189 ~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGI 224 (567)
++++.++.. + -.++.-|+..+|+.|-++++|
T Consensus 397 ~~v~~l~~~----g-~~v~~vGDg~nD~~al~~Adv 427 (499)
T TIGR01494 397 ALVEALQKK----G-RVVAMTGDGVNDAPALKKADV 427 (499)
T ss_pred HHHHHHHHC----C-CEEEEECCChhhHHHHHhCCC
Confidence 888887654 2 237788888999988887643
No 450
>KOG3189|consensus
Probab=28.01 E-value=60 Score=33.15 Aligned_cols=39 Identities=15% Similarity=0.371 Sum_probs=23.4
Q ss_pred EEEEecCCccccCCccccccccccccccchhHHHHHHHHHHCCceEEEEcc
Q psy12533 85 IVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSA 135 (567)
Q Consensus 85 iVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSa 135 (567)
++.||+|||+|..-. ..-+-+.+++.++++. ..|-.+-+
T Consensus 13 l~lfdvdgtLt~~r~-----------~~~~e~~~~l~~lr~~-v~ig~Vgg 51 (252)
T KOG3189|consen 13 LCLFDVDGTLTPPRQ-----------KVTPEMLEFLQKLRKK-VTIGFVGG 51 (252)
T ss_pred EEEEecCCccccccc-----------cCCHHHHHHHHHHhhh-eEEEEeec
Confidence 689999999997631 1233455565555543 44444444
No 451
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=27.94 E-value=2.1e+02 Score=34.09 Aligned_cols=105 Identities=23% Similarity=0.323 Sum_probs=68.3
Q ss_pred EEEEecCCccccCCccccccccccccccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCcee
Q psy12533 85 IVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPML 164 (567)
Q Consensus 85 iVISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GPll 164 (567)
+|..-+||.+. |-+. =.|-.++...+..+++++.|.+++-||+-.-.-++...+=| ++-
T Consensus 519 ~v~va~dg~~~-----g~i~---~~D~~R~~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA~~l--------GId----- 577 (713)
T COG2217 519 VVFVAVDGKLV-----GVIA---LADELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKEL--------GID----- 577 (713)
T ss_pred EEEEEECCEEE-----EEEE---EeCCCChhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHc--------ChH-----
Confidence 68888888433 3331 26888999999999999999999999997655554333332 110
Q ss_pred cCCCchhhhhhhhhhccChhHHHHHHHHHHHHhCCCCCCCEEEecCCcccchhhhhh--cCCCCC
Q psy12533 165 LNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQA--VGIPLS 227 (567)
Q Consensus 165 lsp~~l~~al~REvi~k~p~~fKi~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~--vGIp~~ 227 (567)
.. +-|+ .| +=|.+.++.++.- +. .++-.|+..||+-|-++ |||..+
T Consensus 578 ----~v----~Ael---lP-edK~~~V~~l~~~----g~-~VamVGDGINDAPALA~AdVGiAmG 625 (713)
T COG2217 578 ----EV----RAEL---LP-EDKAEIVRELQAE----GR-KVAMVGDGINDAPALAAADVGIAMG 625 (713)
T ss_pred ----hh----eccC---Cc-HHHHHHHHHHHhc----CC-EEEEEeCCchhHHHHhhcCeeEeec
Confidence 00 1111 23 2388888888853 32 37778888888766555 676554
No 452
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=26.78 E-value=82 Score=39.03 Aligned_cols=56 Identities=13% Similarity=0.265 Sum_probs=41.8
Q ss_pred cCCCcEEE--EecCCccccCCccccccccccccccchhHHHHHHHHHH----CCceEEEEccCcccchHHHHHHHHhccc
Q psy12533 80 RWNDKIVI--SDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKE----NGYKLLYLSARAIGQSRVTREYLQSVKQ 153 (567)
Q Consensus 80 ~~~~kiVI--SDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~~----nGY~ilYLSaRpi~~a~~Tr~~L~~~~q 153 (567)
..-.+++| +|||.| . | ....+.+++..+++ ....|+|.|||++..+ ++.|..
T Consensus 767 ~~~~~~~via~D~d~~---~---~----------~~~~l~~~~~~~~~~~~~~~igfv~aTGR~l~~~---~~~l~~--- 824 (1050)
T TIGR02468 767 RRRKRLFVIAVDCYDD---K---D----------LLQIIKNIFEAVRKERMEGSSGFILSTSMTISEI---QSFLKS--- 824 (1050)
T ss_pred cccceEEEEEeccCCC---C---C----------hHHHHHHHHHHHhccccCCceEEEEEcCCCHHHH---HHHHHh---
Confidence 34466777 999999 2 1 24568888888862 2388999999998665 788888
Q ss_pred CCccCC
Q psy12533 154 EDLTLP 159 (567)
Q Consensus 154 ~~~~LP 159 (567)
++||
T Consensus 825 --~~lp 828 (1050)
T TIGR02468 825 --GGLN 828 (1050)
T ss_pred --CCCC
Confidence 8888
No 453
>TIGR00640 acid_CoA_mut_C methylmalonyl-CoA mutase C-terminal domain. Methylmalonyl-CoA mutase (EC 5.4.99.2) catalyzes a reversible isomerization between L-methylmalonyl-CoA and succinyl-CoA. The enzyme uses an adenosylcobalamin cofactor. It may be a homodimer, as in mitochondrion, or a heterodimer with partially homologous beta chain that does not bind the adenosylcobalamin cofactor, as in Propionibacterium freudenreichii. The most similar archaeal sequences are separate chains, such as AF2215 and AF2219 of Archaeoglobus fulgidus, that correspond roughly to the first 500 and last 130 residues, respectively of known methylmalonyl-CoA mutases. This model describes the C-terminal domain subfamily. In a neighbor-joining tree (methylaspartate mutase S chain as the outgroup), AF2219 branches with a coenzyme B12-dependent enzyme known not to be 5.4.99.2.
Probab=26.67 E-value=3.9e+02 Score=24.82 Aligned_cols=107 Identities=15% Similarity=0.097 Sum_probs=55.6
Q ss_pred cccccccccchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhccCh
Q psy12533 104 LPIMGKDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKP 183 (567)
Q Consensus 104 l~~lGkDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GPlllsp~~l~~al~REvi~k~p 183 (567)
+..+|-|--..|..=+-..++.+||.++|+-.. ... .++.+.+.|.+- +--+++ ++..+ ..
T Consensus 7 ~a~~g~D~Hd~g~~iv~~~l~~~GfeVi~lg~~-~s~----e~~v~aa~e~~a---dii~iS---sl~~~--------~~ 67 (132)
T TIGR00640 7 VAKMGQDGHDRGAKVIATAYADLGFDVDVGPLF-QTP----EEIARQAVEADV---HVVGVS---SLAGG--------HL 67 (132)
T ss_pred EEeeCCCccHHHHHHHHHHHHhCCcEEEECCCC-CCH----HHHHHHHHHcCC---CEEEEc---Cchhh--------hH
Confidence 344566654556666666789999999998875 222 234444444221 111222 22211 11
Q ss_pred hHHHHHHHHHHHHhCCCCCCCEEEecCCcccchhhhhhcCCCCCCEEEEc
Q psy12533 184 QEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLSRIFTIN 233 (567)
Q Consensus 184 ~~fKi~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~~rIF~In 233 (567)
+.+| +.++.++..-+ ...++++|-..-..|...|+++|| +++|.-+
T Consensus 68 ~~~~-~~~~~L~~~g~-~~i~vivGG~~~~~~~~~l~~~Gv--d~~~~~g 113 (132)
T TIGR00640 68 TLVP-ALRKELDKLGR-PDILVVVGGVIPPQDFDELKEMGV--AEIFGPG 113 (132)
T ss_pred HHHH-HHHHHHHhcCC-CCCEEEEeCCCChHhHHHHHHCCC--CEEECCC
Confidence 1111 22344444322 134566664444557999999998 4555433
No 454
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=26.62 E-value=3.6e+02 Score=29.82 Aligned_cols=147 Identities=20% Similarity=0.248 Sum_probs=87.1
Q ss_pred EEEecCCccccCCcccccccccCcCCcchhHHHHHHHHH-HCCceEEEEccCcccchHHHHHHHHhccc-CCccCCCCce
Q psy12533 361 VISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIK-ENGYKLLYLSARAIGQSRVTREYLQSVKQ-EDLTLPEGPM 438 (567)
Q Consensus 361 VIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~-~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q-~~~~lP~GPv 438 (567)
-|.=+|=|+|.|+.-|+.+|.== .-+++.|+++. +.|++=|.|-|-+-| .+..-.+|..+++ +....|..-+
T Consensus 156 SILvLDYsLt~~~~~~~~yPtQL-----~qlv~~Y~~Lv~~~G~~nI~LmGDSAG-GnL~Ls~LqyL~~~~~~~~Pk~~i 229 (374)
T PF10340_consen 156 SILVLDYSLTSSDEHGHKYPTQL-----RQLVATYDYLVESEGNKNIILMGDSAG-GNLALSFLQYLKKPNKLPYPKSAI 229 (374)
T ss_pred eEEEEeccccccccCCCcCchHH-----HHHHHHHHHHHhccCCCeEEEEecCcc-HHHHHHHHHHHhhcCCCCCCceeE
Confidence 34445677887766665554311 14788999988 889999999887554 3445567777776 4568899999
Q ss_pred ecCCCchhhhhh-hhh--h--ccChhHHHHHHHHHHHhhCCCC----CCCEEEecCCCcc--cHHhHHHcCCCCCCEEEE
Q psy12533 439 LLNPTSLLNAFH-TEV--I--EKKPQEFKISCLRDIMALFPPN----TQPFYAGYGNKVN--DVWSYQAVGIPLSRIFTI 507 (567)
Q Consensus 439 l~spd~l~~al~-rEv--i--~k~p~~fK~~~L~~i~~lf~~~----~~pf~agfGNr~t--Dv~aY~~vGIp~~rIF~I 507 (567)
+.||=--..... .+. . ..+-+..-...+......|-++ .......|+|... |..-|+.+ ++...+|++
T Consensus 230 LISPWv~l~~~~~~~~~~~~~n~~~D~l~~~~~~~~~~~y~~~~~~~~~~~~~~~~n~~~n~d~~~W~~I-~~~~~vfVi 308 (374)
T PF10340_consen 230 LISPWVNLVPQDSQEGSSYHDNEKRDMLSYKGLSMFGDAYIGNNDPENDLNSLPFVNIEYNFDAEDWKDI-LKKYSVFVI 308 (374)
T ss_pred EECCCcCCcCCCCCCCccccccccccccchhhHHHHHHhhccccccccccccCCccCcccCCChhHHHHh-ccCCcEEEE
Confidence 999842221100 000 0 0001112222233344444332 1122456677655 88999999 888899987
Q ss_pred cCCCccc
Q psy12533 508 NSRGEVK 514 (567)
Q Consensus 508 n~~g~~~ 514 (567)
=-.-|+-
T Consensus 309 ~Ge~Evf 315 (374)
T PF10340_consen 309 YGEDEVF 315 (374)
T ss_pred ECCcccc
Confidence 6655553
No 455
>cd02966 TlpA_like_family TlpA-like family; composed of TlpA, ResA, DsbE and similar proteins. TlpA, ResA and DsbE are bacterial protein disulfide reductases with important roles in cytochrome maturation. They are membrane-anchored proteins with a soluble TRX domain containing a CXXC motif located in the periplasm. The TRX domains of this family contain an insert, approximately 25 residues in length, which correspond to an extra alpha helix and a beta strand when compared with TRX. TlpA catalyzes an essential reaction in the biogenesis of cytochrome aa3, while ResA and DsbE are essential proteins in cytochrome c maturation. Also included in this family are proteins containing a TlpA-like TRX domain with domain architectures similar to E. coli DipZ protein, and the N-terminal TRX domain of PilB protein from Neisseria which acts as a disulfide reductase that can recylce methionine sulfoxide reductases.
Probab=26.56 E-value=62 Score=26.56 Aligned_cols=37 Identities=19% Similarity=0.305 Sum_probs=24.9
Q ss_pred CCEEEecCCcccchhhhhhcCCCCCCEEEEcCCCceecc
Q psy12533 203 QPFYAGYGNKVNDVWSYQAVGIPLSRIFTINSRGEVKHE 241 (567)
Q Consensus 203 ~pf~agfGNr~tDv~aY~~vGIp~~rIF~In~~g~~~~~ 241 (567)
.+|...+++...-..+|...++| .+|++|++|+++..
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~P--~~~l~d~~g~v~~~ 113 (116)
T cd02966 77 ITFPVLLDPDGELAKAYGVRGLP--TTFLIDRDGRIRAR 113 (116)
T ss_pred CCcceEEcCcchHHHhcCcCccc--eEEEECCCCcEEEE
Confidence 34455566645555666655666 68999999998764
No 456
>cd02971 PRX_family Peroxiredoxin (PRX) family; composed of the different classes of PRXs including many proteins originally known as bacterioferritin comigratory proteins (BCP), based on their electrophoretic mobility before their function was identified. PRXs are thiol-specific antioxidant (TSA) proteins also known as TRX peroxidases and alkyl hydroperoxide reductase C22 (AhpC) proteins. They confer a protective antioxidant role in cells through their peroxidase activity in which hydrogen peroxide, peroxynitrate, and organic hydroperoxides are reduced and detoxified using reducing equivalents derived from either TRX, glutathione, trypanothione and AhpF. They are distinct from other peroxidases in that they have no cofactors such as metals or prosthetic groups. The first step of catalysis, common to all PRXs, is the nucleophilic attack by the catalytic cysteine (also known as the peroxidatic cysteine) on the peroxide leading to cleavage of the oxygen-oxygen bond and the formation of a
Probab=25.64 E-value=2e+02 Score=25.36 Aligned_cols=75 Identities=20% Similarity=0.275 Sum_probs=43.8
Q ss_pred EEEecCC-ccccCCccccc--ccccccccc------chhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCc
Q psy12533 86 VISDIDG-TITKSDVLGHV--LPIMGKDWA------QNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDL 156 (567)
Q Consensus 86 VISDIDG-TITkSD~lG~i--l~~lGkDwt------h~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~ 156 (567)
-+.|+|| +++-++..|.. +-..-..|+ .+...+++.++++.|..|+-+|.-+ .+..+.|++. +
T Consensus 6 ~l~~~~g~~~~l~~~~gk~~ll~f~~~~~c~~C~~~~~~l~~~~~~~~~~~~~~i~is~d~---~~~~~~~~~~-----~ 77 (140)
T cd02971 6 TLPATDGGEVSLSDFKGKWVVLFFYPKDFTPVCTTELCAFRDLAEEFAKGGAEVLGVSVDS---PFSHKAWAEK-----E 77 (140)
T ss_pred eeccCCCcEEehHHhCCCeEEEEEeCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEeCCC---HHHHHHHHhc-----c
Confidence 3445555 45556655543 111112232 3577889999988999999999743 3556777766 3
Q ss_pred cCCCCceecCCC
Q psy12533 157 TLPEGPMLLNPT 168 (567)
Q Consensus 157 ~LP~GPlllsp~ 168 (567)
.-..-|++..++
T Consensus 78 ~~~~~~~l~D~~ 89 (140)
T cd02971 78 GGLNFPLLSDPD 89 (140)
T ss_pred cCCCceEEECCC
Confidence 122345665443
No 457
>cd02969 PRX_like1 Peroxiredoxin (PRX)-like 1 family; hypothetical proteins that show sequence similarity to PRXs. Members of this group contain a conserved cysteine that aligns to the first cysteine in the CXXC motif of TRX. This does not correspond to the peroxidatic cysteine found in PRXs, which aligns to the second cysteine in the CXXC motif of TRX. In addition, these proteins do not contain the other two conserved residues of the catalytic triad of PRX. PRXs confer a protective antioxidant role in cells through their peroxidase activity in which hydrogen peroxide, peroxynitrate, and organic hydroperoxides are reduced and detoxified using reducing equivalents derived from either thioredoxin, glutathione, trypanothione and AhpF.
Probab=25.47 E-value=1.5e+02 Score=27.81 Aligned_cols=48 Identities=17% Similarity=0.289 Sum_probs=33.5
Q ss_pred hhHHHHHHHHHHCCceEEEEccCcc-----cchHHHHHHHHhcccCCccCCCCceecCC
Q psy12533 389 NGVTRLFTKIKENGYKLLYLSARAI-----GQSRVTREYLQSVKQEDLTLPEGPMLLNP 442 (567)
Q Consensus 389 ~Gva~l~~~i~~nGY~iiYLSaRpi-----~qa~~Tr~~L~~~~Q~~~~lP~GPvl~sp 442 (567)
+.+.+|+.++++.|.+|+-+|..+. .-....++|++. +++| -|++..+
T Consensus 45 ~~l~~l~~~~~~~~v~~v~is~d~~~~~~~d~~~~~~~~~~~-----~~~~-~~~l~D~ 97 (171)
T cd02969 45 DRLNRLAKEYGAKGVAVVAINSNDIEAYPEDSPENMKAKAKE-----HGYP-FPYLLDE 97 (171)
T ss_pred HHHHHHHHHHhhCCeEEEEEecCccccccccCHHHHHHHHHH-----CCCC-ceEEECC
Confidence 4778899999989999999987553 234566676666 5665 5566544
No 458
>TIGR02321 Pphn_pyruv_hyd phosphonopyruvate hydrolase. This family consists of phosphonopyruvate hydrolase, an enzyme closely related to phosphoenolpyruvate phosphomutase. It cleaves the direct C-P bond of phosphonopyruvate. The characterized example is from Variovorax sp. Pal2.
Probab=25.30 E-value=1.2e+02 Score=32.15 Aligned_cols=78 Identities=22% Similarity=0.389 Sum_probs=47.0
Q ss_pred chhHHHHHH--HHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhccChhHHHHHH
Q psy12533 388 QNGVTRLFT--KIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISC 465 (567)
Q Consensus 388 h~Gva~l~~--~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~GPvl~spd~l~~al~rEvi~k~p~~fK~~~ 465 (567)
-|||-+-++ -+.+.||+-+|+||=.+.-+ +++|+|=++. .+.+ .+.
T Consensus 19 ~pg~~D~lSAri~e~aGf~ai~~ss~~va~s--------------lG~pD~g~l~-~~e~-----------------~~~ 66 (290)
T TIGR02321 19 AMAAHNPLVAKLAEQAGFGGIWGSGFELSAS--------------YAVPDANILS-MSTH-----------------LEM 66 (290)
T ss_pred eccccCHHHHHHHHHcCCCEEEECHHHHHHH--------------CCCCCcccCC-HHHH-----------------HHH
Confidence 345555544 36788999999999544322 6788865442 2111 123
Q ss_pred HHHHHhhCCCCCCCEE----EecCCCccc---HHhHHHcCCC
Q psy12533 466 LRDIMALFPPNTQPFY----AGYGNKVND---VWSYQAVGIP 500 (567)
Q Consensus 466 L~~i~~lf~~~~~pf~----agfGNr~tD---v~aY~~vGIp 500 (567)
.+.|.... ..|+. .||||..+. |..|.++|+-
T Consensus 67 ~~~I~~~~---~lPv~aD~d~GyG~~~~v~~tV~~~~~aGva 105 (290)
T TIGR02321 67 MRAIASTV---SIPLIADIDTGFGNAVNVHYVVPQYEAAGAS 105 (290)
T ss_pred HHHHHhcc---CCCEEEECCCCCCCcHHHHHHHHHHHHcCCe
Confidence 44555532 33443 589998766 6678888874
No 459
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=25.28 E-value=2.2e+02 Score=35.26 Aligned_cols=36 Identities=3% Similarity=0.054 Sum_probs=31.2
Q ss_pred ccccchhHHHHHHHHHHCCceEEEEccCcccchHHH
Q psy12533 109 KDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVT 144 (567)
Q Consensus 109 kDwth~GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~T 144 (567)
+|-.++++.+..+.+++.|.+++-+||...--|...
T Consensus 654 ~d~lr~~~~~~I~~l~~agi~v~miTGD~~~TA~~i 689 (1054)
T TIGR01657 654 ENPLKPDTKEVIKELKRASIRTVMITGDNPLTAVHV 689 (1054)
T ss_pred ecCCCccHHHHHHHHHHCCCeEEEECCCCHHHHHHH
Confidence 678999999999999999999999999876555444
No 460
>PF13701 DDE_Tnp_1_4: Transposase DDE domain group 1
Probab=25.23 E-value=52 Score=36.68 Aligned_cols=80 Identities=29% Similarity=0.414 Sum_probs=43.5
Q ss_pred eeCCCeEEEEecCCccccCCcccccccccCcCCcchhHHHHH-HHHHHCCceEEEEc----c-------Ccc--cchHHH
Q psy12533 354 WRWNDKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLF-TKIKENGYKLLYLS----A-------RAI--GQSRVT 419 (567)
Q Consensus 354 w~~~~kiVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~-~~i~~nGY~iiYLS----a-------Rpi--~qa~~T 419 (567)
++..++.||.|||+|. .++-|+ +.|.+ | ..+..+||.-|++- + ||. .-++.+
T Consensus 135 ~~~~~~~i~LDiD~T~--~~~~G~----------Qe~~~--~n~y~g~~gY~PL~~f~g~~G~~l~a~LRpGn~~sa~g~ 200 (448)
T PF13701_consen 135 YKKPPKEIVLDIDSTV--DDVHGE----------QEGAV--FNTYYGEDGYHPLVAFDGQTGYLLAAELRPGNVHSAKGA 200 (448)
T ss_pred hccccceEEEeccccc--ccchhh----------ccccc--ccccCCCcccccceeccCCCCceEEEEccCCCCChHHHH
Confidence 3456788999999997 333332 12221 2 12234455544332 2 332 224445
Q ss_pred HHHHHhccc-CCccCCCCceecCCCchhh
Q psy12533 420 REYLQSVKQ-EDLTLPEGPMLLNPTSLLN 447 (567)
Q Consensus 420 r~~L~~~~Q-~~~~lP~GPvl~spd~l~~ 447 (567)
.++|+.+-+ -....|..+|++.-|+-|.
T Consensus 201 ~~fL~~~l~~lr~~~~~~~ILvR~DSgF~ 229 (448)
T PF13701_consen 201 AEFLKRVLRRLRQRWPDTRILVRGDSGFA 229 (448)
T ss_pred HHHHHHHHHHHhhhCccceEEEEecCccC
Confidence 556654322 2235788999998887763
No 461
>cd06418 GH25_BacA-like BacA is a bacterial lysin from Enterococcus faecalis that degrades bacterial cell walls by catalyzing the hydrolysis of 1,4-beta-linkages between N-acetylmuramic acid and N-acetyl-D-glucosamine residues. BacA is homologous to the YbfG and YkuG lysins of Bacillus subtilis. BacA has a C-terminal catalytic glycosyl hydrolase family 25 (GH25) domain and an N-terminal peptidoglycan-binding domain comprised of three alpha helices which is similar to a domain found in matrixins.
Probab=25.01 E-value=1.1e+02 Score=30.76 Aligned_cols=40 Identities=23% Similarity=0.422 Sum_probs=33.6
Q ss_pred HHHHHHHHCCceEE--EEccCccc--chHHHHHHHHhcccCCcc
Q psy12533 118 RLFTKIKENGYKLL--YLSARAIG--QSRVTREYLQSVKQEDLT 157 (567)
Q Consensus 118 ~Ly~~i~~nGY~il--YLSaRpi~--~a~~Tr~~L~~~~q~~~~ 157 (567)
..-..++.+||+++ |||.++.. ....|+++++.|.+.|..
T Consensus 24 ~~a~~l~~~gy~~vgrYls~~~~~~~~k~lt~~e~~~i~~~Gl~ 67 (212)
T cd06418 24 ARAQTLKAAGYGIVGRYLTGSPGGCLSKNLTATELETITAAGLK 67 (212)
T ss_pred HHHHHHHHCCCeEEEEEcCCCCCCCCCCCCCHHHHHHHHHCCCE
Confidence 45566899999987 99998776 789999999999997744
No 462
>cd03009 TryX_like_TryX_NRX Tryparedoxin (TryX)-like family, TryX and nucleoredoxin (NRX) subfamily; TryX and NRX are thioredoxin (TRX)-like protein disulfide oxidoreductases that alter the redox state of target proteins via the reversible oxidation of an active center CXXC motif. TryX is involved in the regulation of oxidative stress in parasitic trypanosomatids by reducing TryX peroxidase, which in turn catalyzes the reduction of hydrogen peroxide and organic hydroperoxides. TryX derives reducing equivalents from reduced trypanothione, a polyamine peptide conjugate unique to trypanosomatids, which is regenerated by the NADPH-dependent flavoprotein trypanothione reductase. Vertebrate NRX is a 400-amino acid nuclear protein with one redox active TRX domain containing a CPPC active site motif followed by one redox inactive TRX-like domain. Mouse NRX transcripts are expressed in all adult tissues but is restricted to the nervous system and limb buds in embryos. Plant NRX, longer than the
Probab=24.35 E-value=1.1e+02 Score=27.03 Aligned_cols=61 Identities=16% Similarity=0.379 Sum_probs=39.8
Q ss_pred EecCCc-cccCCccccc-cccccccccch------hHHHHHHHHHHC--CceEEEEccCcccchHHHHHHHHh
Q psy12533 88 SDIDGT-ITKSDVLGHV-LPIMGKDWAQN------GVTRLFTKIKEN--GYKLLYLSARAIGQSRVTREYLQS 150 (567)
Q Consensus 88 SDIDGT-ITkSD~lG~i-l~~lGkDwth~------GVa~Ly~~i~~n--GY~ilYLSaRpi~~a~~Tr~~L~~ 150 (567)
-|.||. ++.++..|.+ +-.+...|..+ .+.+++++++++ |..|+++|.... .+..++|++.
T Consensus 4 ~~~~G~~v~l~~~~gk~vll~Fwa~wC~~C~~~~p~l~~~~~~~~~~~~~~~vv~is~d~~--~~~~~~~~~~ 74 (131)
T cd03009 4 LRNDGGKVPVSSLEGKTVGLYFSASWCPPCRAFTPKLVEFYEKLKESGKNFEIVFISWDRD--EESFNDYFSK 74 (131)
T ss_pred cccCCCCccHHHhCCcEEEEEEECCCChHHHHHhHHHHHHHHHHHhcCCCEEEEEEECCCC--HHHHHHHHHc
Confidence 477884 7778878874 33444556543 566778888876 688999987533 3455566654
No 463
>PTZ00445 p36-lilke protein; Provisional
Probab=23.68 E-value=92 Score=31.89 Aligned_cols=59 Identities=17% Similarity=0.092 Sum_probs=40.4
Q ss_pred eeeCCCeEEEEecCCccccCCcccccccc-cCcCC---cchhHHHHHHHHHHCCceEEEEccC
Q psy12533 353 KWRWNDKIVISDIDGTITKSDVLGHVLPI-MGKDW---AQNGVTRLFTKIKENGYKLLYLSAR 411 (567)
Q Consensus 353 lw~~~~kiVIsDIDGTiTkSD~~G~~~~~-~GkDw---~h~Gva~l~~~i~~nGY~iiYLSaR 411 (567)
|...+-|+|++|.|-||..--..|-.-|. -+.+- ..|..-.+..++++.|.+|+-+|=-
T Consensus 38 L~~~GIk~Va~D~DnTlI~~HsgG~~~~~~~~~~~~~~~tpefk~~~~~l~~~~I~v~VVTfS 100 (219)
T PTZ00445 38 LNECGIKVIASDFDLTMITKHSGGYIDPDNDDIRVLTSVTPDFKILGKRLKNSNIKISVVTFS 100 (219)
T ss_pred HHHcCCeEEEecchhhhhhhhcccccCCCcchhhhhccCCHHHHHHHHHHHHCCCeEEEEEcc
Confidence 46678899999999998874333422222 11111 3455777888999999999988854
No 464
>PRK15000 peroxidase; Provisional
Probab=23.46 E-value=2.8e+02 Score=27.31 Aligned_cols=102 Identities=17% Similarity=0.278 Sum_probs=57.9
Q ss_pred hhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhccc-CCc-cCCCCceecCCCchhhhhhhhhhccChhHHHHHHH
Q psy12533 389 NGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQ-EDL-TLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCL 466 (567)
Q Consensus 389 ~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q-~~~-~lP~GPvl~spd~l~~al~rEvi~k~p~~fK~~~L 466 (567)
+...+++.+++++|..|+-+|.-..- .-+.|.+...+ .|. ++| =|++.-+++-
T Consensus 55 ~~l~~~~~~f~~~g~~vigvS~D~~~---~~~~w~~~~~~~~g~~~i~-fpllsD~~~~--------------------- 109 (200)
T PRK15000 55 IAFDKRYEEFQKRGVEVVGVSFDSEF---VHNAWRNTPVDKGGIGPVK-YAMVADVKRE--------------------- 109 (200)
T ss_pred HHHHHHHHHHHHCCCEEEEEECCCHH---HHHHHHhhHHHhCCccccC-ceEEECCCcH---------------------
Confidence 35678899999999999999965432 22566554333 332 222 2455433211
Q ss_pred HHHHhhCCCCCCCEEEecCCCcccHHhHHHcCCCCCCEEEEcCCCcccccccc--cccccHhhHHhhhhh
Q psy12533 467 RDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLSRIFTINSRGEVKHEMTQ--TFQSTYSNMSYLVDQ 534 (567)
Q Consensus 467 ~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~~rIF~In~~g~~~~~~~~--~~~~sY~~l~~~vd~ 534 (567)
+.. .||-... ..|+..--.|+|||+|+|++.... ..-.+...+-++++.
T Consensus 110 --ia~-----------~ygv~~~------~~g~~~r~tfiID~~G~I~~~~~~~~~~gr~~~eilr~l~a 160 (200)
T PRK15000 110 --IQK-----------AYGIEHP------DEGVALRGSFLIDANGIVRHQVVNDLPLGRNIDEMLRMVDA 160 (200)
T ss_pred --HHH-----------HcCCccC------CCCcEEeEEEEECCCCEEEEEEecCCCCCCCHHHHHHHHHH
Confidence 111 1121111 125666788999999999875433 223456666666654
No 465
>COG0386 BtuE Glutathione peroxidase [Posttranslational modification, protein turnover, chaperones]
Probab=22.72 E-value=72 Score=31.16 Aligned_cols=48 Identities=33% Similarity=0.654 Sum_probs=35.6
Q ss_pred EEEecCC-ccccCCcccccccccccc----ccch--hHHHHHHHHHHCCceEEEE
Q psy12533 86 VISDIDG-TITKSDVLGHVLPIMGKD----WAQN--GVTRLFTKIKENGYKLLYL 133 (567)
Q Consensus 86 VISDIDG-TITkSD~lG~il~~lGkD----wth~--GVa~Ly~~i~~nGY~ilYL 133 (567)
-+-|+|| +++-++..|.++-.+... .|-+ |...||.++++.|.-|+=.
T Consensus 9 ~~~~~~G~~~~l~~~~GkVlLIVNtASkCGfTpQYegLe~Ly~ky~~~Gf~VLgF 63 (162)
T COG0386 9 SVKDIDGEPVSLSDYKGKVLLIVNTASKCGFTPQYEGLEALYKKYKDKGFEVLGF 63 (162)
T ss_pred eeeccCCCCccHHHhCCcEEEEEEcccccCCcHhHHHHHHHHHHHhhCCcEEEec
Confidence 4678999 566688899876554432 3333 8999999999999999833
No 466
>cd02966 TlpA_like_family TlpA-like family; composed of TlpA, ResA, DsbE and similar proteins. TlpA, ResA and DsbE are bacterial protein disulfide reductases with important roles in cytochrome maturation. They are membrane-anchored proteins with a soluble TRX domain containing a CXXC motif located in the periplasm. The TRX domains of this family contain an insert, approximately 25 residues in length, which correspond to an extra alpha helix and a beta strand when compared with TRX. TlpA catalyzes an essential reaction in the biogenesis of cytochrome aa3, while ResA and DsbE are essential proteins in cytochrome c maturation. Also included in this family are proteins containing a TlpA-like TRX domain with domain architectures similar to E. coli DipZ protein, and the N-terminal TRX domain of PilB protein from Neisseria which acts as a disulfide reductase that can recylce methionine sulfoxide reductases.
Probab=22.68 E-value=68 Score=26.32 Aligned_cols=36 Identities=19% Similarity=0.331 Sum_probs=22.8
Q ss_pred CEEEecCCCcccHHhHHHcCCCCCCEEEEcCCCccccc
Q psy12533 479 PFYAGYGNKVNDVWSYQAVGIPLSRIFTINSRGEVKHE 516 (567)
Q Consensus 479 pf~agfGNr~tDv~aY~~vGIp~~rIF~In~~g~~~~~ 516 (567)
++...+++...-..+|...++| .+|++|++|++...
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~P--~~~l~d~~g~v~~~ 113 (116)
T cd02966 78 TFPVLLDPDGELAKAYGVRGLP--TTFLIDRDGRIRAR 113 (116)
T ss_pred CcceEEcCcchHHHhcCcCccc--eEEEECCCCcEEEE
Confidence 4444556544445555544555 68999999988653
No 467
>PTZ00137 2-Cys peroxiredoxin; Provisional
Probab=22.48 E-value=3.9e+02 Score=27.93 Aligned_cols=101 Identities=18% Similarity=0.259 Sum_probs=57.8
Q ss_pred hHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHh-cccCC-ccCCCCceecCCCchhhhhhhhhhccChhHHHHHHHH
Q psy12533 390 GVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQS-VKQED-LTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLR 467 (567)
Q Consensus 390 Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~-~~Q~~-~~lP~GPvl~spd~l~~al~rEvi~k~p~~fK~~~L~ 467 (567)
...+++.++++.|..|+-+|.-.. ..-+.|.+. +++.| .+++ =|++.-+++
T Consensus 120 ~l~~~~~ef~~~gv~VigIS~Ds~---~~h~aw~~~~~~~~g~~~l~-fPlLsD~~~----------------------- 172 (261)
T PTZ00137 120 GFSERLKEFEERGVKVLGVSVDSP---FSHKAWKELDVRQGGVSPLK-FPLFSDISR----------------------- 172 (261)
T ss_pred HHHHHHHHHHHCCCEEEEEECCCH---HHHHHHHhhhhhhccccCcc-eEEEEcCCh-----------------------
Confidence 567899999999999999987442 234566653 33321 2343 245543321
Q ss_pred HHHhhCCCCCCCEEEecCCCcccHHhHHHcCCCCCCEEEEcCCCcccccccc--cccccHhhHHhhhhhc
Q psy12533 468 DIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLSRIFTINSRGEVKHEMTQ--TFQSTYSNMSYLVDQM 535 (567)
Q Consensus 468 ~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~~rIF~In~~g~~~~~~~~--~~~~sY~~l~~~vd~~ 535 (567)
.+.. +||-.. ..|++.--+|+||++|.|++.... ..-.+...+-+.+|.+
T Consensus 173 ~iak-----------ayGv~~-------~~g~a~R~tFIID~dG~I~~~~~~~~~~gr~v~eiLr~l~al 224 (261)
T PTZ00137 173 EVSK-----------SFGLLR-------DEGFSHRASVLVDKAGVVKHVAVYDLGLGRSVDETLRLFDAV 224 (261)
T ss_pred HHHH-----------HcCCCC-------cCCceecEEEEECCCCEEEEEEEeCCCCCCCHHHHHHHHHHh
Confidence 1112 222111 026677789999999999875432 2224455555555544
No 468
>PTZ00253 tryparedoxin peroxidase; Provisional
Probab=22.18 E-value=2.3e+02 Score=27.59 Aligned_cols=24 Identities=13% Similarity=0.090 Sum_probs=20.7
Q ss_pred hHHHHHHHHHHCCceEEEEccCcc
Q psy12533 390 GVTRLFTKIKENGYKLLYLSARAI 413 (567)
Q Consensus 390 Gva~l~~~i~~nGY~iiYLSaRpi 413 (567)
..++++.++++.|.+|+-+|..+.
T Consensus 58 ~l~~~~~~f~~~g~~vv~IS~d~~ 81 (199)
T PTZ00253 58 QFSDSVKRFNELNCEVLACSMDSE 81 (199)
T ss_pred HHHHHHHHHHHcCCEEEEEeCCCH
Confidence 677889999999999999997654
No 469
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=21.80 E-value=4.1e+02 Score=32.58 Aligned_cols=113 Identities=17% Similarity=0.296 Sum_probs=73.8
Q ss_pred cCCcchhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCC-c--eecCCCchhhhhhhh----hh--
Q psy12533 384 KDWAQNGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEG-P--MLLNPTSLLNAFHTE----VI-- 454 (567)
Q Consensus 384 kDw~h~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP~G-P--vl~spd~l~~al~rE----vi-- 454 (567)
.|+.+++|.+....++++|-++.-+||-..--|...-. . +++... . +.+..+. +..+..| .+
T Consensus 545 ~Dppr~~v~~aI~~l~~AGI~v~MiTGD~~~TA~aIa~---~-----~Gi~~~~~~~~vi~G~e-l~~l~~~el~~~~~~ 615 (917)
T COG0474 545 EDPPREDVKEAIEELREAGIKVWMITGDHVETAIAIAK---E-----CGIEAEAESALVIDGAE-LDALSDEELAELVEE 615 (917)
T ss_pred cCCCCccHHHHHHHHHHCCCcEEEECCCCHHHHHHHHH---H-----cCCCCCCCceeEeehHH-hhhcCHHHHHHHhhh
Confidence 69999999999999999999999999975554432222 2 332222 1 1222222 2222221 22
Q ss_pred ----ccChhHHHHHHHHHHHhhCCCCCCCEEEecCCCcccHHhHHHc--CCCC-----------CCEEEEcCC
Q psy12533 455 ----EKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAV--GIPL-----------SRIFTINSR 510 (567)
Q Consensus 455 ----~k~p~~fK~~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~v--GIp~-----------~rIF~In~~ 510 (567)
.|=.-+.|....+.++.. .-++|.=|+-.||+-|-+++ ||.. +.|+.++..
T Consensus 616 ~~VfARvsP~qK~~IV~~lq~~-----g~vVamtGDGvNDapALk~ADVGIamg~~Gtdaak~Aadivl~dd~ 683 (917)
T COG0474 616 LSVFARVSPEQKARIVEALQKS-----GHVVAMTGDGVNDAPALKAADVGIAMGGEGTDAAKEAADIVLLDDN 683 (917)
T ss_pred CcEEEEcCHHHHHHHHHHHHhC-----CCEEEEeCCCchhHHHHHhcCccEEecccHHHHHHhhcceEeecCc
Confidence 222246799999999982 34578889999999999995 7733 446666665
No 470
>PRK09437 bcp thioredoxin-dependent thiol peroxidase; Reviewed
Probab=21.75 E-value=2.9e+02 Score=25.19 Aligned_cols=34 Identities=15% Similarity=0.266 Sum_probs=26.2
Q ss_pred hhHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHh
Q psy12533 389 NGVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQS 425 (567)
Q Consensus 389 ~Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~ 425 (567)
+...+++++++++|..++-+|..+ ....++|++.
T Consensus 51 ~~l~~~~~~~~~~~v~vi~Is~d~---~~~~~~~~~~ 84 (154)
T PRK09437 51 CGLRDNMDELKKAGVVVLGISTDK---PEKLSRFAEK 84 (154)
T ss_pred HHHHHHHHHHHHCCCEEEEEcCCC---HHHHHHHHHH
Confidence 456788889999999999999753 3556777766
No 471
>cd04375 RhoGAP_DLC1 RhoGAP_DLC1: RhoGAP (GTPase-activator protein [GAP] for Rho-like small GTPases) domain of DLC1-like proteins. DLC1 shows in vitro GAP activity towards RhoA and CDC42. Beside its C-terminal GAP domain, DLC1 also contains a SAM (sterile alpha motif) and a START (StAR-related lipid transfer action) domain. DLC1 has tumor suppressor activity in cell culture. Small GTPases cluster into distinct families, and all act as molecular switches, active in their GTP-bound form but inactive when GDP-bound. The Rho family of GTPases activates effectors involved in a wide variety of developmental processes, including regulation of cytoskeleton formation, cell proliferation and the JNK signaling pathway. GTPases generally have a low intrinsic GTPase hydrolytic activity but there are family-specific groups of GAPs that enhance the rate of GTP hydrolysis by several orders of magnitude.
Probab=21.68 E-value=2e+02 Score=28.88 Aligned_cols=74 Identities=20% Similarity=0.444 Sum_probs=43.8
Q ss_pred HHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhhhccChhHHHHHHHHHHH
Q psy12533 116 VTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIM 195 (567)
Q Consensus 116 Va~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q~~~~LP~GPlllsp~~l~~al~REvi~k~p~~fKi~~L~~i~ 195 (567)
+.+|-..+...+..+.|-...+...|...+.||+. || .||+ |..+...|.. +....+++-|++.++.+.
T Consensus 51 i~~L~~~~d~~~~~~~~~~~~~~~va~lLK~flRe-------LP-ePLl--t~~l~~~fi~-~~~~~~~~~~~~~l~~~i 119 (220)
T cd04375 51 IQKLRSMIESSTDNVNYDGQQAYDVADMLKQYFRD-------LP-EPLL--TNKLSETFIA-IFQYVPKEQRLEAVQCAI 119 (220)
T ss_pred HHHHHHHHhcCCCccCcccccHHHHHHHHHHHHHh-------CC-CccC--CHHHHHHHHH-HHhcCCHHHHHHHHHHHH
Confidence 33444444433333444444567889999999988 77 4888 4445544322 223345566777777777
Q ss_pred HhCCC
Q psy12533 196 ALFPP 200 (567)
Q Consensus 196 ~lf~~ 200 (567)
..+|.
T Consensus 120 ~~LP~ 124 (220)
T cd04375 120 LLLPD 124 (220)
T ss_pred HhCCH
Confidence 66653
No 472
>COG0263 ProB Glutamate 5-kinase [Amino acid transport and metabolism]
Probab=21.31 E-value=2.7e+02 Score=30.70 Aligned_cols=54 Identities=20% Similarity=0.399 Sum_probs=43.8
Q ss_pred hHHHHHHHHHHCCceEEEEccC-------------------------cccchHHHHHHHHhcccCCccCCCCceecCCCc
Q psy12533 390 GVTRLFTKIKENGYKLLYLSAR-------------------------AIGQSRVTREYLQSVKQEDLTLPEGPMLLNPTS 444 (567)
Q Consensus 390 Gva~l~~~i~~nGY~iiYLSaR-------------------------pi~qa~~Tr~~L~~~~Q~~~~lP~GPvl~spd~ 444 (567)
..++-..++++.|++++-+|+= +++|....+.|-+...+ |+++-|-+|++-+.
T Consensus 32 ~l~~~ia~L~~~G~eVilVSSGAiaaG~~~Lg~~~rp~~l~~kQA~AAVGQ~~Lm~~y~~~f~~--~g~~v~QiLLTr~D 109 (369)
T COG0263 32 ELVRQVAALHKAGHEVVLVSSGAIAAGRTRLGLPKRPKTLAEKQAAAAVGQVRLMQLYEELFAR--YGIKVGQILLTRDD 109 (369)
T ss_pred HHHHHHHHHHhCCCEEEEEccchhhhChhhcCCCCCCcchHHHHHHHHhCHHHHHHHHHHHHHh--cCCeeeEEEeehhh
Confidence 3555666788999999999974 57888999999888888 89999999986654
Q ss_pred h
Q psy12533 445 L 445 (567)
Q Consensus 445 l 445 (567)
+
T Consensus 110 ~ 110 (369)
T COG0263 110 F 110 (369)
T ss_pred h
Confidence 4
No 473
>PRK00955 hypothetical protein; Provisional
Probab=21.17 E-value=5.5e+02 Score=30.28 Aligned_cols=65 Identities=12% Similarity=0.252 Sum_probs=38.2
Q ss_pred ccchhHHHHHHHHHH-CCceEEEEcc--Ccccc-hHHHHHHHHhcccCCccCCCCceecCCCchhhhhhhhh
Q psy12533 111 WAQNGVTRLFTKIKE-NGYKLLYLSA--RAIGQ-SRVTREYLQSVKQEDLTLPEGPMLLNPTSLLNAFHTEV 178 (567)
Q Consensus 111 wth~GVa~Ly~~i~~-nGY~ilYLSa--Rpi~~-a~~Tr~~L~~~~q~~~~LP~GPlllsp~~l~~al~REv 178 (567)
..|....+|+++|.+ .|.+-+++|+ |.... .+...+++..+.+. + + .|-|++.+.+......+.+
T Consensus 384 ~d~~~l~~LLr~l~~l~gvkrv~isSGIR~D~l~~~~~~~~l~eL~~~-~-v-sg~L~IapESgSd~VLk~M 452 (620)
T PRK00955 384 VDHKEYLELLRKVRKLPGVKKVFIRSGIRYDYLLHDKNDEFFEELCEH-H-V-SGQLKVAPEHISDRVLKLM 452 (620)
T ss_pred cChHHHHHHHHHHhccCCceEEEeecceeccccccCCcHHHHHHHHHH-h-c-CCCceeCcCCCChHHHHHh
Confidence 356789999999998 5865566666 65442 23223344444432 2 1 2456777776665555544
No 474
>PF02142 MGS: MGS-like domain This is a subfamily of this family; InterPro: IPR011607 This domain composes the whole protein of methylglyoxal synthetase and the domain is also found in carbamoyl phosphate synthetase (CPS) where it forms a regulatory domain that binds to the allosteric effector ornithine. The known structures in this domain show a common phosphate binding site []. ; PDB: 4A1O_A 3ZZM_A 1ZCZ_A 1M6V_C 1CS0_C 1C30_E 1C3O_G 1BXR_A 1T36_E 1A9X_A ....
Probab=21.09 E-value=1.5e+02 Score=25.57 Aligned_cols=32 Identities=16% Similarity=0.378 Sum_probs=24.6
Q ss_pred hHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHhcccCCccCC
Q psy12533 390 GVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQSVKQEDLTLP 434 (567)
Q Consensus 390 Gva~l~~~i~~nGY~iiYLSaRpi~qa~~Tr~~L~~~~Q~~~~lP 434 (567)
|++++.+++++.||+|+ --..|.+||+. +++|
T Consensus 1 e~~~~a~~l~~lG~~i~--------AT~gTa~~L~~-----~Gi~ 32 (95)
T PF02142_consen 1 EIVPLAKRLAELGFEIY--------ATEGTAKFLKE-----HGIE 32 (95)
T ss_dssp THHHHHHHHHHTTSEEE--------EEHHHHHHHHH-----TT--
T ss_pred CHHHHHHHHHHCCCEEE--------EChHHHHHHHH-----cCCC
Confidence 57889999999999987 23568889987 7777
No 475
>PF02590 SPOUT_MTase: Predicted SPOUT methyltransferase; InterPro: IPR003742 This family of proteins are predicted to be SPOUT methyltransferases []. ; GO: 0008168 methyltransferase activity, 0006364 rRNA processing, 0005737 cytoplasm; PDB: 1VH0_E 4FAK_A 1TO0_G 1O6D_A 1NS5_B.
Probab=20.65 E-value=2.2e+02 Score=27.36 Aligned_cols=52 Identities=19% Similarity=0.312 Sum_probs=37.8
Q ss_pred eeCCCeEEEEecCCccccCCcccccccccCcCCcchhHHHHHHHHHHCCc-eEEEEccCcccchHHHHH
Q psy12533 354 WRWNDKIVISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIKENGY-KLLYLSARAIGQSRVTRE 421 (567)
Q Consensus 354 w~~~~kiVIsDIDGTiTkSD~~G~~~~~~GkDw~h~Gva~l~~~i~~nGY-~iiYLSaRpi~qa~~Tr~ 421 (567)
.+.++.+|+.|..| +.++-..-|+...+|..+|. .+.++=|=|.|..+..++
T Consensus 64 i~~~~~~i~Ld~~G----------------k~~sS~~fA~~l~~~~~~g~~~i~F~IGG~~G~~~~~~~ 116 (155)
T PF02590_consen 64 IPPNDYVILLDERG----------------KQLSSEEFAKKLERWMNQGKSDIVFIIGGADGLSEEVRK 116 (155)
T ss_dssp SHTTSEEEEE-TTS----------------EE--HHHHHHHHHHHHHTTS-EEEEEE-BTTB--HHHHH
T ss_pred ccCCCEEEEEcCCC----------------ccCChHHHHHHHHHHHhcCCceEEEEEecCCCCCHHHHh
Confidence 36778888888765 44555678999999999999 999999999999876665
No 476
>PTZ00137 2-Cys peroxiredoxin; Provisional
Probab=20.47 E-value=4.1e+02 Score=27.76 Aligned_cols=122 Identities=19% Similarity=0.222 Sum_probs=66.7
Q ss_pred cccCCc-cccc--cccccccccch------hHHHHHHHHHHCCceEEEEccCcccchHHHHHHHHh-cccCC-ccCCCCc
Q psy12533 94 ITKSDV-LGHV--LPIMGKDWAQN------GVTRLFTKIKENGYKLLYLSARAIGQSRVTREYLQS-VKQED-LTLPEGP 162 (567)
Q Consensus 94 ITkSD~-lG~i--l~~lGkDwth~------GVa~Ly~~i~~nGY~ilYLSaRpi~~a~~Tr~~L~~-~~q~~-~~LP~GP 162 (567)
+.-+|. .|.. +-..-.+|+-. ...+++.++++.|..|+-+|.-.. ..-+.|.+. +++.| .+++ =|
T Consensus 90 vsLsd~~kgk~vVL~FyPa~ftpvCt~El~~l~~~~~ef~~~gv~VigIS~Ds~---~~h~aw~~~~~~~~g~~~l~-fP 165 (261)
T PTZ00137 90 FNSSDYFKDSYGLLVFYPLDFTFVCPSELLGFSERLKEFEERGVKVLGVSVDSP---FSHKAWKELDVRQGGVSPLK-FP 165 (261)
T ss_pred EeHHHHcCCCeEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCH---HHHHHHHhhhhhhccccCcc-eE
Confidence 444554 4422 22223456554 667889999999999999987442 334566653 33322 2343 24
Q ss_pred eecCCCchhhhhhhhhhccChhHHHHHHHHHHHHhCCCCCCCEEEecCCcccchhhhhhcCCCCCCEEEEcCCCceeccc
Q psy12533 163 MLLNPTSLLNAFHTEVIEKKPQEFKISCLRDIMALFPPNTQPFYAGYGNKVNDVWSYQAVGIPLSRIFTINSRGEVKHEM 242 (567)
Q Consensus 163 lllsp~~l~~al~REvi~k~p~~fKi~~L~~i~~lf~~~~~pf~agfGNr~tDv~aY~~vGIp~~rIF~In~~g~~~~~~ 242 (567)
++.-+++- +...| |-.. ..|++.--+|+||++|+|+...
T Consensus 166 lLsD~~~~-----------------------iakay-----------Gv~~-------~~g~a~R~tFIID~dG~I~~~~ 204 (261)
T PTZ00137 166 LFSDISRE-----------------------VSKSF-----------GLLR-------DEGFSHRASVLVDKAGVVKHVA 204 (261)
T ss_pred EEEcCChH-----------------------HHHHc-----------CCCC-------cCCceecEEEEECCCCEEEEEE
Confidence 55433211 22222 1110 1266677889999999998865
Q ss_pred ccc--ccccHHhHHhhhhhc
Q psy12533 243 TQT--FQSTYSNMSYLVDQM 260 (567)
Q Consensus 243 ~~~--~~~sY~~l~~~vd~~ 260 (567)
... .-.+...+-+.+|.+
T Consensus 205 ~~~~~~gr~v~eiLr~l~al 224 (261)
T PTZ00137 205 VYDLGLGRSVDETLRLFDAV 224 (261)
T ss_pred EeCCCCCCCHHHHHHHHHHh
Confidence 322 223455555555433
No 477
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=20.36 E-value=5.1e+02 Score=28.61 Aligned_cols=146 Identities=20% Similarity=0.251 Sum_probs=84.5
Q ss_pred EEEecCCccccCCccccccccccccccchhHHHHHHHHH-HCCceEEEEccCcccchHHHHHHHHhccc-CCccCCCCce
Q psy12533 86 VISDIDGTITKSDVLGHVLPIMGKDWAQNGVTRLFTKIK-ENGYKLLYLSARAIGQSRVTREYLQSVKQ-EDLTLPEGPM 163 (567)
Q Consensus 86 VISDIDGTITkSD~lG~il~~lGkDwth~GVa~Ly~~i~-~nGY~ilYLSaRpi~~a~~Tr~~L~~~~q-~~~~LP~GPl 163 (567)
-|.=+|=|+|.|+.-|+.+|.==. -.++.|+++- +.|++=+.|-|-+-|= +..-.+|.-+.+ +....|+.-+
T Consensus 156 SILvLDYsLt~~~~~~~~yPtQL~-----qlv~~Y~~Lv~~~G~~nI~LmGDSAGG-nL~Ls~LqyL~~~~~~~~Pk~~i 229 (374)
T PF10340_consen 156 SILVLDYSLTSSDEHGHKYPTQLR-----QLVATYDYLVESEGNKNIILMGDSAGG-NLALSFLQYLKKPNKLPYPKSAI 229 (374)
T ss_pred eEEEEeccccccccCCCcCchHHH-----HHHHHHHHHHhccCCCeEEEEecCccH-HHHHHHHHHHhhcCCCCCCceeE
Confidence 445556777776655555433111 5788999998 7799988888865442 344456666666 4467899999
Q ss_pred ecCCCchhhhhhhhhhc-----cChhHHHHHHHHHHHHhCCCC----CCCEEEecCCccc--chhhhhhcCCCCCCEEEE
Q psy12533 164 LLNPTSLLNAFHTEVIE-----KKPQEFKISCLRDIMALFPPN----TQPFYAGYGNKVN--DVWSYQAVGIPLSRIFTI 232 (567)
Q Consensus 164 llsp~~l~~al~REvi~-----k~p~~fKi~~L~~i~~lf~~~----~~pf~agfGNr~t--Dv~aY~~vGIp~~rIF~I 232 (567)
+.||=--.......-.. .+-+..-...+....+.|-++ ......-|.|... |..-|+.+ ++.+.+|++
T Consensus 230 LISPWv~l~~~~~~~~~~~~~n~~~D~l~~~~~~~~~~~y~~~~~~~~~~~~~~~~n~~~n~d~~~W~~I-~~~~~vfVi 308 (374)
T PF10340_consen 230 LISPWVNLVPQDSQEGSSYHDNEKRDMLSYKGLSMFGDAYIGNNDPENDLNSLPFVNIEYNFDAEDWKDI-LKKYSVFVI 308 (374)
T ss_pred EECCCcCCcCCCCCCCccccccccccccchhhHHHHHHhhccccccccccccCCccCcccCCChhHHHHh-ccCCcEEEE
Confidence 99985322210000000 001112222333444444332 1122445667655 88899999 888899987
Q ss_pred cCCCce
Q psy12533 233 NSRGEV 238 (567)
Q Consensus 233 n~~g~~ 238 (567)
=-.-|+
T Consensus 309 ~Ge~Ev 314 (374)
T PF10340_consen 309 YGEDEV 314 (374)
T ss_pred ECCccc
Confidence 665555
Done!