Query psy12534
Match_columns 343
No_of_seqs 159 out of 1318
Neff 6.2
Searched_HMMs 29240
Date Fri Aug 16 21:47:03 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy12534.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/12534hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3se6_A Endoplasmic reticulum a 100.0 1.4E-50 4.7E-55 439.7 19.3 261 10-343 430-710 (967)
2 2xdt_A Endoplasmic reticulum a 100.0 1.6E-48 5.5E-53 421.1 22.4 254 11-343 369-642 (897)
3 4fke_A Aminopeptidase N; zinc 100.0 1.4E-48 4.7E-53 422.1 21.4 258 10-342 383-644 (909)
4 1z5h_A Tricorn protease intera 100.0 8.7E-45 3E-49 386.9 21.3 230 11-341 327-557 (780)
5 3rjo_A Endoplasmic reticulum a 100.0 1.1E-33 3.6E-38 281.3 15.7 159 108-343 1-159 (419)
6 2gtq_A Aminopeptidase N; alani 99.9 4.5E-27 1.6E-31 253.0 18.6 241 12-341 356-622 (867)
7 3b34_A Aminopeptidase N; prote 99.9 2.9E-25 9.8E-30 239.4 16.1 202 12-302 381-595 (891)
8 3ebh_A PFA-M1, M1 family amino 99.9 5.5E-23 1.9E-27 221.2 15.4 186 12-274 364-559 (889)
9 3cia_A Cold-active aminopeptid 99.8 4.5E-21 1.5E-25 199.0 -2.4 197 11-342 363-561 (605)
10 3u9w_A Leukotriene A-4 hydrola 99.7 3.3E-18 1.1E-22 177.7 -0.7 110 11-130 355-474 (608)
11 2xq0_A LTA-4 hydrolase, leukot 99.6 7.4E-18 2.5E-22 175.8 -5.8 207 12-341 364-588 (632)
12 4fgm_A Aminopeptidase N family 96.6 0.0015 5E-08 67.7 4.8 67 34-110 376-450 (597)
No 1
>3se6_A Endoplasmic reticulum aminopeptidase 2; thermolysin-like catalytic domain, zinc BIND glycosylation, hydrolase; HET: LYS NAG MES MAN; 3.08A {Homo sapiens} PDB: 4e36_A*
Probab=100.00 E-value=1.4e-50 Score=439.66 Aligned_cols=261 Identities=26% Similarity=0.362 Sum_probs=218.3
Q ss_pred cccccccccccCCchhHhhhcccccccCCchhHHHHHHhh-hcHHHHHHHHHHHHHHcCCCCCChHHHHHHHHHhhhccC
Q psy12534 10 LLVWEPKTYDVKFLVPIRVVLVQLSLSCELPKNHLRATGS-WQSTVLKLGLQKYIKKKAMGSSTQAELWAFLTNAGHEMR 88 (343)
Q Consensus 10 ~~~~~pi~~~v~~~~~i~~~fd~isy~kg~~~~vlrMl~~-lGee~F~~Gl~~YLk~~~y~Na~~~DLw~aL~~~~~~~~ 88 (343)
+...|||..+|.++.+|.+.||.|+|.|| ++|||||+. +|+++|++||+.||++|+|+|++++|||++|++++++.+
T Consensus 430 ~~~~~Pi~~~v~~~~~i~~~Fd~i~Y~KG--a~vL~mL~~~lG~e~F~~gLr~Yl~~~~~~nat~~Dl~~~l~~~~~~~~ 507 (967)
T 3se6_A 430 LNSSRPISKPAETPTQIQEMFDEVSYNKG--ACILNMLKDFLGEEKFQKGIIQYLKKFSYRNAKNDDLWSSLSNSCLESD 507 (967)
T ss_dssp STTCCCSSCCCCSHHHHHHTSSHHHHHHH--HHHHHHHHHHHCHHHHHHHHHHHHHHHTTEEECHHHHHHHHHCC-----
T ss_pred ccCCCCceeecCCHHHHHHhcchhhhhHH--HHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHhhhcc
Confidence 34689999999999999999999999999 999999997 899999999999999999999999999999999754321
Q ss_pred C-------------------CCCCCCHHHHHHHhhcCCCCcEEEEEEecCCCeEEEEEeecCCccceeeeccccccccCC
Q psy12534 89 T-------------------LPEKMDVETIMNTWTLQTGFPVIRVARDYDAGSAVVKQVRGLGFTLIIIVLINTARTELK 149 (343)
Q Consensus 89 ~-------------------~~~~~~v~~~m~~W~~Q~GyPvV~V~~~~~~~~i~l~Q~rf~~~~~~~~l~~~~~~~~~~ 149 (343)
. ...+.+|++||++|+.|+|||+|+|+++ +++++|+|+|| +.++....+.
T Consensus 508 ~~~~~~~~~~~~~~~~~~~~~~s~~dv~~~m~~W~~q~G~Pvl~V~~~--~~~~~l~Q~rf--------~~~~~~~~~~- 576 (967)
T 3se6_A 508 FTSGGVCHSDPKMTSNMLAFLGENAEVKEMMTTWTLQKGIPLLVVKQD--GCSLRLQQERF--------LQGVFQEDPE- 576 (967)
T ss_dssp --------------------CCCCCCHHHHHHHHHHSCSCEEEEEEEE--TTEEEEEEEEC--------CCC--------
T ss_pred ccccccccccccccccccccccCCcCHHHHHHHHhcCCCCcEEEEEec--CCEEEEEeeee--------cCCCCCCccc-
Confidence 1 1347899999999999999999999985 67899999999 6533211000
Q ss_pred CCCCCccccccccchhhhhccccCCCCCccccCCCcccccCCccccccccCCCCCCceEEEEEEEEeCCCCCcccccceE
Q psy12534 150 GPFTPAVGYHYYGAQELRRDLTTRNRPNFRVTKPSHWLRAEPNLTIKQEDLNAESDDWIIFNIQVATRNRPNFRVTKPFH 229 (343)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~I~Pit~~~~~~~~~~~~~~~~ 229 (343)
+ .....++.|+| ||+|.++.+. +.+..
T Consensus 577 --------~----------------------------------------~~~~~~~~W~I-Pl~~~~~~~~----~~~~~ 603 (967)
T 3se6_A 577 --------W----------------------------------------RALQERYLWHI-PLTYSTSSSN----VIHRH 603 (967)
T ss_dssp ----------------------------------------------------CCSCCCCC-CEEEEESSCC----CCEEE
T ss_pred --------c----------------------------------------ccccCCceEEE-EEEEEeCCCC----ccceE
Confidence 0 00014579999 9999886543 23467
Q ss_pred EeecCCcceEEeccCCCCCCCeEEEccCceeEEEEecCHhhHHHHHHHHhcCCCCCCCCHHhHHHHHHHHHHHHHcCCCC
Q psy12534 230 WLRAEPNLTIKQEDLNAESDDWIIFNIQQTGYYRVLYDEKNWYLIIATLRNSTTYNTIHLLNRAQLIDDAMNLARAGLLD 309 (343)
Q Consensus 230 wl~~~~~~~i~l~~~~~~~~~wi~~N~~~~GyYRV~YD~~~w~~L~~~L~~~~n~~~i~~~~Ra~Li~D~f~la~ag~l~ 309 (343)
||..++ .++.+ +.+++||++|.++.|||||+||+++|++|+++|. .|++.|++.+|||||+|+|+|+++|.++
T Consensus 604 ~l~~~~-~~i~~----~~~~~wi~~N~~~~GyyRV~Yd~~~w~~l~~~L~--~~~~~i~~~~Ra~li~D~~~la~~g~~~ 676 (967)
T 3se6_A 604 ILKSKT-DTLDL----PEKTSWVKFNVDSNGYYIVHYEGHGWDQLITQLN--QNHTLLRPKDRVGLIHDVFQLVGAGRLT 676 (967)
T ss_dssp CCCSSE-EEEEC----SSCCSCEEESGGGCSSCEEEEETTHHHHHHHHHH--HHGGGSCHHHHHHHHHHHHHHHHTTSSC
T ss_pred EecCCc-eEEec----cCCCceEEEeCCccEEEEEecCHHHHHHHHHHHh--hccCCCCHHHHHHHHHHHHHHHHcCCCC
Confidence 776543 22333 4567999999999999999999999999999997 6888999999999999999999999999
Q ss_pred HHHHHHHHHhcccCCChhHHHHHHHHHHHHHhcC
Q psy12534 310 YKIALDVTAYLQYETELVPWRSAMQALGYIEGQL 343 (343)
Q Consensus 310 ~~~~L~l~~yL~~E~~~~~w~~~~~~L~~i~~lL 343 (343)
++.+|++++||++|++|+||..++..|.++.+++
T Consensus 677 ~~~~l~l~~~l~~E~~~~~w~~a~~~l~~l~~~~ 710 (967)
T 3se6_A 677 LDKALDMTYYLQHETSSPALLEGLSYLESFYHMM 710 (967)
T ss_dssp HHHHHHHTTGGGTCCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999987653
No 2
>2xdt_A Endoplasmic reticulum aminopeptidase 1; glycoprotein, metal-binding, metalloprotease, protease, hydrolase, adaptive immunity; HET: NAG; 2.70A {Homo sapiens} PDB: 2yd0_A* 3qnf_A* 3mdj_A*
Probab=100.00 E-value=1.6e-48 Score=421.08 Aligned_cols=254 Identities=25% Similarity=0.395 Sum_probs=217.0
Q ss_pred ccccccccccCCchhHhhhcccccccCCchhHHHHHHhh-hcHHHHHHHHHHHHHHcCCCCCChHHHHHHHHHhhhccCC
Q psy12534 11 LVWEPKTYDVKFLVPIRVVLVQLSLSCELPKNHLRATGS-WQSTVLKLGLQKYIKKKAMGSSTQAELWAFLTNAGHEMRT 89 (343)
Q Consensus 11 ~~~~pi~~~v~~~~~i~~~fd~isy~kg~~~~vlrMl~~-lGee~F~~Gl~~YLk~~~y~Na~~~DLw~aL~~~~~~~~~ 89 (343)
..+|||..+|.+|.+|...||.|+|.|| ++|||||+. +|++.|++||+.||++|+|+|++++|||++|++++++.+.
T Consensus 369 ~~~~Pi~~~v~~p~~i~~~fd~i~Y~KG--a~vl~mL~~~lG~e~F~~gl~~Yl~~~~~~~a~~~Dl~~~l~~~~~~~~~ 446 (897)
T 2xdt_A 369 NSSHPVSTPVENPAQIREMFDDVSYDKG--ACILNMLREYLSADAFKSGIVQYLQKHSYKNTKNEDLWDSMASICPTDGV 446 (897)
T ss_dssp TTCCCSSCCCCSHHHHHHTSSHHHHHHH--HHHHHHHHHHSCHHHHHHHHHHHHHHHTTEEECHHHHHHHHHTC------
T ss_pred cCCCCCEEeCCCHHHHHHhcchhhhhhH--HHHHHHHHHHhCHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHhhhccc
Confidence 4689999999999999999999999999 999999997 7999999999999999999999999999999997544322
Q ss_pred -----------C-C-------CCCCHHHHHHHhhcCCCCcEEEEEEecCCCeEEEEEeecCCccceeeeccccccccCCC
Q psy12534 90 -----------L-P-------EKMDVETIMNTWTLQTGFPVIRVARDYDAGSAVVKQVRGLGFTLIIIVLINTARTELKG 150 (343)
Q Consensus 90 -----------~-~-------~~~~v~~~m~~W~~Q~GyPvV~V~~~~~~~~i~l~Q~rf~~~~~~~~l~~~~~~~~~~~ 150 (343)
. . .+.+|+.||++|+.|+|||+|+|+++ +++++|+|+|| +.++...
T Consensus 447 ~~~~~~~~~~~~~s~~~~~~~~g~dl~~~~~~W~~q~G~P~l~v~~~--~~~~~l~Q~~f--------~~~~~~~----- 511 (897)
T 2xdt_A 447 KGMDGFCSRSQHSSSSSHWHQEGVDVKTMMNTWTLQKGFPLITITVR--GRNVHMKQEHY--------MKGSDGA----- 511 (897)
T ss_dssp ----------------------CCCHHHHHHHHHSSCSEEEEEEEEE--TTEEEEEEEEE--------CCC---------
T ss_pred cccccccccccccccccccccCCCCHHHHHHHhhcCCCceEEEEEEc--CCEEEEEEEEe--------ecCCCCC-----
Confidence 1 1 27899999999999999999999987 67899999999 5422110
Q ss_pred CCCCccccccccchhhhhccccCCCCCccccCCCcccccCCccccccccCCCCCCceEEEEEEEEeCCCCCcccccceEE
Q psy12534 151 PFTPAVGYHYYGAQELRRDLTTRNRPNFRVTKPSHWLRAEPNLTIKQEDLNAESDDWIIFNIQVATRNRPNFRVTKPFHW 230 (343)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~I~Pit~~~~~~~~~~~~~~~~w 230 (343)
+ ..++.|+| ||+|.+.++. ..+..|
T Consensus 512 -----------------------------------------------~---~~~~~w~i-Pi~~~~~~~~----~~~~~~ 536 (897)
T 2xdt_A 512 -----------------------------------------------P---DTGYLWHV-PLTFITSKSD----MVHRFL 536 (897)
T ss_dssp ---------------------------------------------------CCCCCCCE-EEEEEESSCS----SCEEEE
T ss_pred -----------------------------------------------C---CCCceEEE-EEEEEeCCCC----ccceEE
Confidence 0 03578999 9999875543 235789
Q ss_pred eecCCcceEEeccCCCCCCCeEEEccCceeEEEEecCHhhHHHHHHHHhcCCCCCCCCHHhHHHHHHHHHHHHHcCCCCH
Q psy12534 231 LRAEPNLTIKQEDLNAESDDWIIFNIQQTGYYRVLYDEKNWYLIIATLRNSTTYNTIHLLNRAQLIDDAMNLARAGLLDY 310 (343)
Q Consensus 231 l~~~~~~~i~l~~~~~~~~~wi~~N~~~~GyYRV~YD~~~w~~L~~~L~~~~n~~~i~~~~Ra~Li~D~f~la~ag~l~~ 310 (343)
|..++. ++.+ +.+++||++|.++.|||||+||+++|+.|+++|. .+++.|++.+|||||+|+|+|+++|.+++
T Consensus 537 l~~~~~-~~~~----~~~~~~i~~N~~~~gyyrV~Yd~~~w~~l~~~L~--~~~~~i~~~~Ra~li~D~~~la~~g~~~~ 609 (897)
T 2xdt_A 537 LKTKTD-VLIL----PEEVEWIKFNVGMNGYYIVHYEDDGWDSLTGLLK--GTHTAVSSNDRASLINNAFQLVSIGKLSI 609 (897)
T ss_dssp ECSSEE-EEEC----SSCCSCEEESGGGCSSCEEEECTTHHHHHHHHHH--HCGGGSCHHHHHHHHHHHHHHHTTTSSCH
T ss_pred ecCCce-EEEc----cCCCceEEECCCceEEEEEEcCHHHHHHHHHHHH--hCcccCCHHHHHHHHHHHHHHHHcCCCCH
Confidence 987543 2333 3567899999999999999999999999999997 68889999999999999999999999999
Q ss_pred HHHHHHHHhcccCCChhHHHHHHHHHHHHHhcC
Q psy12534 311 KIALDVTAYLQYETELVPWRSAMQALGYIEGQL 343 (343)
Q Consensus 311 ~~~L~l~~yL~~E~~~~~w~~~~~~L~~i~~lL 343 (343)
+.+|++++||++|++|+||..++..|.+|.++|
T Consensus 610 ~~~l~l~~~l~~E~~~~~w~~~~~~l~~l~~~~ 642 (897)
T 2xdt_A 610 EKALDLSLYLKHETEIMPVFQGLNELIPMYKLM 642 (897)
T ss_dssp HHHHHHHGGGGGCCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999998753
No 3
>4fke_A Aminopeptidase N; zinc aminopeptidase, hydrolase; HET: NAG; 1.85A {Sus scrofa} PDB: 4fkh_A* 4fkk_A* 4fkn_A* 4fkf_A* 4f5c_A* 4fyt_A* 4fyr_A* 4fys_A* 4fyq_A*
Probab=100.00 E-value=1.4e-48 Score=422.15 Aligned_cols=258 Identities=31% Similarity=0.497 Sum_probs=218.9
Q ss_pred cccccccccc---cCCchhHhhhcccccccCCchhHHHHHHhh-hcHHHHHHHHHHHHHHcCCCCCChHHHHHHHHHhhh
Q psy12534 10 LLVWEPKTYD---VKFLVPIRVVLVQLSLSCELPKNHLRATGS-WQSTVLKLGLQKYIKKKAMGSSTQAELWAFLTNAGH 85 (343)
Q Consensus 10 ~~~~~pi~~~---v~~~~~i~~~fd~isy~kg~~~~vlrMl~~-lGee~F~~Gl~~YLk~~~y~Na~~~DLw~aL~~~~~ 85 (343)
+..+||+..+ |.++.+|.++||.|+|.|| ++|||||+. +|+++|++||+.||++|+|+|++++|||++|++++.
T Consensus 383 ~~~~~pi~~~~~~v~~~~~i~~~fd~i~Y~KG--a~vL~mL~~~lG~e~F~~gl~~Yl~~~~~~na~~~Dl~~~l~~~s~ 460 (909)
T 4fke_A 383 LASSHPLTTPAEEVNTPAQISEMFDSISYSKG--ASVIRMLSNFLTEDLFKEGLASYLHAFAYQNTTYLDLWEHLQKAVD 460 (909)
T ss_dssp STTCCCSCCCGGGCCSHHHHHTTSSHHHHHHH--HHHHHHHHHHHCHHHHHHHHHHHHHHHTTEEECHHHHHHHHHHHHH
T ss_pred hcccCCccccccccCChhhHHhhhhhHHHHHH--HHHHHHHHHHhHHHHHHHHHHHHHHhhcccCCCHHHHHHHHHHHhC
Confidence 4578999875 7889999999999999999 999999997 799999999999999999999999999999999998
Q ss_pred ccCCCCCCCCHHHHHHHhhcCCCCcEEEEEEecCCCeEEEEEeecCCccceeeeccccccccCCCCCCCccccccccchh
Q psy12534 86 EMRTLPEKMDVETIMNTWTLQTGFPVIRVARDYDAGSAVVKQVRGLGFTLIIIVLINTARTELKGPFTPAVGYHYYGAQE 165 (343)
Q Consensus 86 ~~~~~~~~~~v~~~m~~W~~Q~GyPvV~V~~~~~~~~i~l~Q~rf~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (343)
+...++.+.+|+++|++|+.|+|||+|+|++. ++ .++|+|| +........
T Consensus 461 ~~~~~~~~~~v~~~~~~W~~q~G~Pvv~V~~~--~~--~~~q~~~--------~~~~~~~~~------------------ 510 (909)
T 4fke_A 461 AQTSIRLPDTVRAIMDRWTLQMGFPVITVDTK--TG--NISQKHF--------LLDSESNVT------------------ 510 (909)
T ss_dssp TCSSCCCSSCHHHHHHHHHSSCSCEEEEEETT--TT--EEEEEEC--------CSCTTCCCC------------------
T ss_pred cccccccchhHHhHhhCccccCCCcEEEEEec--cC--cEEEEEE--------EeccCCCCC------------------
Confidence 77666667899999999999999999999865 44 4788888 543221110
Q ss_pred hhhccccCCCCCccccCCCcccccCCccccccccCCCCCCceEEEEEEEEeCCCCCcccccceEEeecCCcceEEeccCC
Q psy12534 166 LRRDLTTRNRPNFRVTKPSHWLRAEPNLTIKQEDLNAESDDWIIFNIQVATRNRPNFRVTKPFHWLRAEPNLTIKQEDLN 245 (343)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~I~Pit~~~~~~~~~~~~~~~~wl~~~~~~~i~l~~~~ 245 (343)
.....++.|+| ||++.+.+.. ....|+.........+. .
T Consensus 511 ---------------------------------~~~~~~~~w~I-Pl~~~~~~~~-----~~~~~~~~~~~~~~~~~--~ 549 (909)
T 4fke_A 511 ---------------------------------RSSAFDYLWIV-PISSIKNGVM-----QDHYWLRDVSQAQNDLF--K 549 (909)
T ss_dssp ---------------------------------SCCTTTTCCCE-EECEEETTEE-----CCCEEECSCSEEECGGG--C
T ss_pred ---------------------------------CCCCCCceEEE-EEEEEeCCCc-----cceEEeeccccceeeec--c
Confidence 00115678999 9999876532 23456655443211222 3
Q ss_pred CCCCCeEEEccCceeEEEEecCHhhHHHHHHHHhcCCCCCCCCHHhHHHHHHHHHHHHHcCCCCHHHHHHHHHhcccCCC
Q psy12534 246 AESDDWIIFNIQQTGYYRVLYDEKNWYLIIATLRNSTTYNTIHLLNRAQLIDDAMNLARAGLLDYKIALDVTAYLQYETE 325 (343)
Q Consensus 246 ~~~~~wi~~N~~~~GyYRV~YD~~~w~~L~~~L~~~~n~~~i~~~~Ra~Li~D~f~la~ag~l~~~~~L~l~~yL~~E~~ 325 (343)
..+++||++|.+++|||||+||+++|+.|+++|. .|+..|+..+|+|||+|+|+|+++|.++++.+|++++||++|++
T Consensus 550 ~~~~~wi~~N~~~~gyyRV~Yd~~~w~~l~~~L~--~~~~~i~~~~Ra~li~D~~~la~ag~~~~~~~l~l~~~l~~E~~ 627 (909)
T 4fke_A 550 TASDDWVLLNVNVTGYFQVNYDEDNWRMIQHQLQ--TNLSVIPVINRAQVIYDSFNLATAHMVPVTLALDNTLFLNGEKE 627 (909)
T ss_dssp CCTTCCEEESGGGCSSCEEEECHHHHHHHHHHHH--HCGGGSCHHHHHHHHHHHHHHHHTTSSCHHHHHHTTGGGGGCCS
T ss_pred CCCCCeEEECCCceEEEEEecCHHHHHHHHHHHH--hCcccCCHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHccCcc
Confidence 5678999999999999999999999999999997 78899999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHhc
Q psy12534 326 LVPWRSAMQALGYIEGQ 342 (343)
Q Consensus 326 ~~~w~~~~~~L~~i~~l 342 (343)
|+||.+++..|.++..+
T Consensus 628 y~~w~~~~~~l~~l~~~ 644 (909)
T 4fke_A 628 YMPWQAALSSLSYFSLM 644 (909)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99999999999998765
No 4
>1z5h_A Tricorn protease interacting factor F3; zinc aminopeptidase, gluzicins, superhelix, hydrolase; 2.30A {Thermoplasma acidophilum} PDB: 1z1w_A 3q7j_A*
Probab=100.00 E-value=8.7e-45 Score=386.91 Aligned_cols=230 Identities=20% Similarity=0.353 Sum_probs=204.5
Q ss_pred ccccccccccCCchhHhhhcccccccCCchhHHHHHHhh-hcHHHHHHHHHHHHHHcCCCCCChHHHHHHHHHhhhccCC
Q psy12534 11 LVWEPKTYDVKFLVPIRVVLVQLSLSCELPKNHLRATGS-WQSTVLKLGLQKYIKKKAMGSSTQAELWAFLTNAGHEMRT 89 (343)
Q Consensus 11 ~~~~pi~~~v~~~~~i~~~fd~isy~kg~~~~vlrMl~~-lGee~F~~Gl~~YLk~~~y~Na~~~DLw~aL~~~~~~~~~ 89 (343)
..+|||..+|.++.+|...||.|+|.|| ++|||||+. +|++.|++||+.||++|+|+|++++|||++|++++
T Consensus 327 ~~~~pi~~~v~~~~~~~~~fd~i~Y~KG--a~vl~mL~~~lG~e~F~~~l~~yl~~~~~~~~t~~Dl~~~l~~~s----- 399 (780)
T 1z5h_A 327 KNTHPIEVDVRDPDEISQIFDEISYGKG--ASILRMIEDYAGYEEFRKGISKYLNDHKFGNAEGSDLWTAIEDVS----- 399 (780)
T ss_dssp TTCCCSCCCCCSSCCTTTTSCHHHHHHH--HHHHHHHHHHHCHHHHHHHHHHHHHHHTTEEECHHHHHHHHHHHH-----
T ss_pred cCCCCceecCCCHHHHHHhcchhhhhhH--HHHHHHHHHHhCHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHh-----
Confidence 4689999999999999999999999999 999999997 89999999999999999999999999999999998
Q ss_pred CCCCCCHHHHHHHhhcCCCCcEEEEEEecCCCeEEEEEeecCCccceeeeccccccccCCCCCCCccccccccchhhhhc
Q psy12534 90 LPEKMDVETIMNTWTLQTGFPVIRVARDYDAGSAVVKQVRGLGFTLIIIVLINTARTELKGPFTPAVGYHYYGAQELRRD 169 (343)
Q Consensus 90 ~~~~~~v~~~m~~W~~Q~GyPvV~V~~~~~~~~i~l~Q~rf~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (343)
+.+|+.+|++|+.|+|||+|+|+++ +++++|+|+|| +.++ .
T Consensus 400 ---g~dl~~~~~~W~~~~G~P~l~v~~~--~~~~~l~Q~~f--------~~~~---~----------------------- 440 (780)
T 1z5h_A 400 ---GKPVKRVMEYWIKNPGYPVIKLKRN--GRKITMYQTRF--------LLNG---E----------------------- 440 (780)
T ss_dssp ---CSCHHHHHHHHHHSCSCEEEEEEES--SSEEEEEEEEC--------CSSC---C-----------------------
T ss_pred ---CCCHHHHHHHHHhCCCCceEEEEec--CcEEEEEEEEe--------cCCC---C-----------------------
Confidence 7899999999999999999999985 67899999999 4421 0
Q ss_pred cccCCCCCccccCCCcccccCCccccccccCCCCCCceEEEEEEEEeCCCCCcccccceEEeecCCcceEEeccCCCCCC
Q psy12534 170 LTTRNRPNFRVTKPSHWLRAEPNLTIKQEDLNAESDDWIIFNIQVATRNRPNFRVTKPFHWLRAEPNLTIKQEDLNAESD 249 (343)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~I~Pit~~~~~~~~~~~~~~~~wl~~~~~~~i~l~~~~~~~~ 249 (343)
.+..|+| ||++ +.++. +. .. |..++ +.++ ++
T Consensus 441 ---------------------------------~~~~w~i-Pi~~-~~~~~----~~-~~-l~~~~---~~~~----~~- 471 (780)
T 1z5h_A 441 ---------------------------------EEGRWPV-PVNI-KKKDG----VE-RI-LLEDE---ASIE----AD- 471 (780)
T ss_dssp ---------------------------------EECCCCE-EEEE-EETTE----EE-EE-EECSS---EEEE----CT-
T ss_pred ---------------------------------CCceEEE-EEEE-cCCCc----ee-ee-ccCce---EEcc----CC-
Confidence 2357999 9999 43321 22 23 66532 5554 23
Q ss_pred CeEEEccCceeEEEEecCHhhHHHHHHHHhcCCCCCCCCHHhHHHHHHHHHHHHHcCCCCHHHHHHHHHhcccCCChhHH
Q psy12534 250 DWIIFNIQQTGYYRVLYDEKNWYLIIATLRNSTTYNTIHLLNRAQLIDDAMNLARAGLLDYKIALDVTAYLQYETELVPW 329 (343)
Q Consensus 250 ~wi~~N~~~~GyYRV~YD~~~w~~L~~~L~~~~n~~~i~~~~Ra~Li~D~f~la~ag~l~~~~~L~l~~yL~~E~~~~~w 329 (343)
+||++|.++.|||||+||+++|+.|+++| ..|++.+|+|||+|+|+|+++|.++++.+|++++||++|++|.||
T Consensus 472 ~~i~~N~~~~gyyrv~Yd~~~~~~l~~~l------~~i~~~~Ra~li~D~~~l~~~g~~~~~~~l~l~~~l~~E~~~~~w 545 (780)
T 1z5h_A 472 GLIKINADSAGFYRVLYDDATFSDVMGHY------RDLSPLDRIGLVDDLFAFLLSGHIDPETYRQRIRNFFDDEDHNVI 545 (780)
T ss_dssp TEEEESGGGCSSSEEECCHHHHHHHHHTG------GGCCHHHHHHHHHHHHHHHHHTSSCHHHHHHHHGGGTTCCCHHHH
T ss_pred ceEEEeCCCCEEEEEECCHHHHHHHHHHh------ccCCHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHhccCCcHHHH
Confidence 89999999999999999999999999988 358999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHh
Q psy12534 330 RSAMQALGYIEG 341 (343)
Q Consensus 330 ~~~~~~L~~i~~ 341 (343)
..++..|.++.+
T Consensus 546 ~~~~~~l~~~~~ 557 (780)
T 1z5h_A 546 TAIVGQMEYLRM 557 (780)
T ss_dssp HHHHHHHHHHHT
T ss_pred HHHHHHHHHHHh
Confidence 999999998865
No 5
>3rjo_A Endoplasmic reticulum aminopeptidase 1; ERAP1, hydrolase; 2.30A {Homo sapiens}
Probab=100.00 E-value=1.1e-33 Score=281.31 Aligned_cols=159 Identities=25% Similarity=0.408 Sum_probs=132.7
Q ss_pred CCcEEEEEEecCCCeEEEEEeecCCccceeeeccccccccCCCCCCCccccccccchhhhhccccCCCCCccccCCCccc
Q psy12534 108 GFPVIRVARDYDAGSAVVKQVRGLGFTLIIIVLINTARTELKGPFTPAVGYHYYGAQELRRDLTTRNRPNFRVTKPSHWL 187 (343)
Q Consensus 108 GyPvV~V~~~~~~~~i~l~Q~rf~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (343)
|||||+|+++ ++.++|+|+|| +.+++...
T Consensus 1 GyPvvtV~~~--~~~~~l~Q~RF--------l~~~~~~~----------------------------------------- 29 (419)
T 3rjo_A 1 GFPLITITVR--GRNVHMKQEHY--------MKGSDGAP----------------------------------------- 29 (419)
T ss_dssp CEEEEEEEEE--TTEEEEEEEEE--------C------------------------------------------------
T ss_pred CCCEEEEEEC--CCEEEEEEeec--------cCCCCCCC-----------------------------------------
Confidence 9999999985 67999999999 65432111
Q ss_pred ccCCccccccccCCCCCCceEEEEEEEEeCCCCCcccccceEEeecCCcceEEeccCCCCCCCeEEEccCceeEEEEecC
Q psy12534 188 RAEPNLTIKQEDLNAESDDWIIFNIQVATRNRPNFRVTKPFHWLRAEPNLTIKQEDLNAESDDWIIFNIQQTGYYRVLYD 267 (343)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~W~I~Pit~~~~~~~~~~~~~~~~wl~~~~~~~i~l~~~~~~~~~wi~~N~~~~GyYRV~YD 267 (343)
..++.|+| ||+|.+++++ ..+..||..++ .++.+ +++++||++|.+++|||||+||
T Consensus 30 --------------~~~~~W~I-Pl~~~~~~~~----~~~~~~l~~~~-~~i~l----~~~~~wi~~N~~~~GyYRVnYd 85 (419)
T 3rjo_A 30 --------------DTGYLWHV-PLTFITSKSD----MVHRFLLKTKT-DVLIL----PEEVEWIKFNVGMNGYYIVHYE 85 (419)
T ss_dssp -----------------CCCCE-EEEEEESSCS----SCEEEEECSSE-EEEEC----SSCCSCEEEEESSSSCCEEECH
T ss_pred --------------CCCeEEEE-EEEEEeCCCC----ccceEEEecCc-eEEEc----CCCCceEEEeCCccceEEEEeC
Confidence 03578999 9999987643 24567887663 32433 4567899999999999999999
Q ss_pred HhhHHHHHHHHhcCCCCCCCCHHhHHHHHHHHHHHHHcCCCCHHHHHHHHHhcccCCChhHHHHHHHHHHHHHhcC
Q psy12534 268 EKNWYLIIATLRNSTTYNTIHLLNRAQLIDDAMNLARAGLLDYKIALDVTAYLQYETELVPWRSAMQALGYIEGQL 343 (343)
Q Consensus 268 ~~~w~~L~~~L~~~~n~~~i~~~~Ra~Li~D~f~la~ag~l~~~~~L~l~~yL~~E~~~~~w~~~~~~L~~i~~lL 343 (343)
+++|+.|+++|. +|++.||+.+|+|||+|+|+|+++|.++++.+|++++||++|++|+||.++++.|++|+++|
T Consensus 86 ~~~w~~L~~~L~--~~~~~i~~~dRa~LidD~~~La~ag~~~~~~~l~l~~yL~~E~~y~~w~~~~~~l~~l~~~~ 159 (419)
T 3rjo_A 86 DDGWDSLTGLLK--GTHTAVSSNDRASLINNAFQLVSIGKLSIEKALDLSLYLKHETEIMPVFQGLNELIPMYKLM 159 (419)
T ss_dssp HHHHHHHHHHHH--HHGGGSCHHHHHHHHHHHHHHHHHTSSCHHHHHHHHGGGGGCCSHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh--hCCccCCHhHHHHHHHHHHHHHHcCCCCHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHH
Confidence 999999999997 68899999999999999999999999999999999999999999999999999999998753
No 6
>2gtq_A Aminopeptidase N; alanine aminopeptidase, M1 family peptidas PSI-2, structural genomics, protein structure initiative; 2.05A {Neisseria meningitidis}
Probab=99.95 E-value=4.5e-27 Score=253.01 Aligned_cols=241 Identities=12% Similarity=0.058 Sum_probs=184.5
Q ss_pred cccccccccCCchhHhhhcccccccCCchhHHHHHHhh-hcHHHHHHHHHHHHHHcCCCCCChHHHHHHHHHhhhccCCC
Q psy12534 12 VWEPKTYDVKFLVPIRVVLVQLSLSCELPKNHLRATGS-WQSTVLKLGLQKYIKKKAMGSSTQAELWAFLTNAGHEMRTL 90 (343)
Q Consensus 12 ~~~pi~~~v~~~~~i~~~fd~isy~kg~~~~vlrMl~~-lGee~F~~Gl~~YLk~~~y~Na~~~DLw~aL~~~~~~~~~~ 90 (343)
.+|||.. .++.+|...||.++|.|| ++|||||+. +|++.|++||+.|+++|+|+|++++|||++|++++
T Consensus 356 ~~~Pi~~--~~~~~i~~~f~~i~Y~KG--a~vl~mL~~~lG~e~F~~glr~Yl~~~~~~~~t~~Df~~~l~~~s------ 425 (867)
T 2gtq_A 356 TAHPVRP--ASYEEMNNFYTMTVYEKG--AEVVRMYHTLLGEEGFQKGMKLYFQRHDGQAVTCDDFRAAMADAN------ 425 (867)
T ss_dssp TCCCSSC--SEESCGGGGCSHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEECHHHHHHHHHHHH------
T ss_pred cCCCCcC--CChhhhhhhccchhhhHH--HHHHHHHHHHHCHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHh------
Confidence 5799874 456789999999999999 999999997 79999999999999999999999999999999998
Q ss_pred CCCCCHHHHHHHhhcCCCCcEEEEEEecCCCe--EEEEEeecCCccceeeeccccccccCCCCCCCccccccccchhhhh
Q psy12534 91 PEKMDVETIMNTWTLQTGFPVIRVARDYDAGS--AVVKQVRGLGFTLIIIVLINTARTELKGPFTPAVGYHYYGAQELRR 168 (343)
Q Consensus 91 ~~~~~v~~~m~~W~~Q~GyPvV~V~~~~~~~~--i~l~Q~rf~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (343)
+.++..| +.|+.|+|+|+|+|++.++++. ++|+|++| ...+.
T Consensus 426 --g~dl~~f-~~W~~q~G~P~l~v~~~~~~~~~~l~l~Q~~~--------~~~~~------------------------- 469 (867)
T 2gtq_A 426 --GINLDQF-ALWYSQAGTPVLEAEGRLKNNIFELTVKQTVP--------PTPDM------------------------- 469 (867)
T ss_dssp --TCCCGGG-GHHHHCCSCCEEEEEEEEETTEEEEEEEEECC--------CBTTB-------------------------
T ss_pred --CCCHHHH-HHHhcCCCCceEEEEEEecCCEEEEEEEEecC--------CCCCC-------------------------
Confidence 6788886 6999999999999998765554 78999998 32110
Q ss_pred ccccCCCCCccccCCCcccccCCccccccccCCCCCCceEEEEEEEEeCC--CCCcc----c---ccceEEeecCCcceE
Q psy12534 169 DLTTRNRPNFRVTKPSHWLRAEPNLTIKQEDLNAESDDWIIFNIQVATRN--RPNFR----V---TKPFHWLRAEPNLTI 239 (343)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~I~Pit~~~~~--~~~~~----~---~~~~~wl~~~~~~~i 239 (343)
.....|+| ||++...+ +.... . ....+||+.++ +++
T Consensus 470 ---------------------------------~~~~~~~i-Pi~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~-~~~ 514 (867)
T 2gtq_A 470 ---------------------------------TDKQPMMI-PVKVGLLNRNGEAVAFDYQGKRATEAVLLLTEAE-QTF 514 (867)
T ss_dssp ---------------------------------SCCCCCCE-EEEEEEECTTCCBCCEECSSCEESCEEEEECSSE-EEE
T ss_pred ---------------------------------CCCceEEE-EEEEEEEcCCCcccccccccccccceEEEEcCCc-eEE
Confidence 03468999 99997643 21110 0 02356777654 447
Q ss_pred EeccCCCCCCCeEEEccCceeEEEEecCHhhHHHHHHHHhcCCCCCCCCHHhHHHH---HHHHHHH-----HHcCCC-C-
Q psy12534 240 KQEDLNAESDDWIIFNIQQTGYYRVLYDEKNWYLIIATLRNSTTYNTIHLLNRAQL---IDDAMNL-----ARAGLL-D- 309 (343)
Q Consensus 240 ~l~~~~~~~~~wi~~N~~~~GyYRV~YD~~~w~~L~~~L~~~~n~~~i~~~~Ra~L---i~D~f~l-----a~ag~l-~- 309 (343)
.+++ .....|+.+|.+..+++||+|+-..+.. ...+.+ .-+..+|.++ +.|...+ +++|.. +
T Consensus 515 ~~~~--~~~~p~~~l~r~fs~~~~l~~~~~~~~l-~~l~~~-----~~d~~~R~~a~~~L~~~~~~~~~~~~~~~~~~~~ 586 (867)
T 2gtq_A 515 LLEG--VTEAVVPSLLRGFSAPVHLNYPYSDDDL-LLLLAH-----DSDAFTRWEAAQTLYRRAVAANLATLSDGVELPK 586 (867)
T ss_dssp EEBC--CCSCCEEEESTTCCSSCEEECCCCHHHH-HHHHHH-----CSCHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCC
T ss_pred EEeC--CCCCCceEecCCCCccEEEECCCCHHHH-HHHHhh-----CCChhHHHHHHHHHHHHHHHHHHHHhhcCCCCCc
Confidence 7763 3456789999999999999987665543 333431 1147888766 8887777 667765 6
Q ss_pred HHHHHHHHHhcc-cCC-ChhHHHHHHH--HHHHHHh
Q psy12534 310 YKIALDVTAYLQ-YET-ELVPWRSAMQ--ALGYIEG 341 (343)
Q Consensus 310 ~~~~L~l~~yL~-~E~-~~~~w~~~~~--~L~~i~~ 341 (343)
++.+++++.++. +|+ |+.+|..++. .+.+|..
T Consensus 587 ~~~~~~~~~~~~~~~~~d~~~~a~~l~lp~~~~l~~ 622 (867)
T 2gtq_A 587 HEKLLAAVEKVISDDLLDNAFKALLLGVPSEAELWD 622 (867)
T ss_dssp CHHHHHHHHHHHHCSSSCHHHHHHHTCCCCHHHHTT
T ss_pred hHHHHHHHHHHhcCcCCCHHHHHHHhcCCCHHHHHh
Confidence 789999998655 787 9999999988 6666643
No 7
>3b34_A Aminopeptidase N; protease, hydrolase, thermolysin, phenylal membrane, metal-binding, metalloprotease; HET: PHE; 1.30A {Escherichia coli K12} PDB: 2hpt_A* 3b2p_A* 2hpo_A* 3b2x_A* 3b37_A* 3b3b_A* 3ked_A* 3qjx_A 3puu_A 2dq6_A 2dqm_A* 2zxg_A*
Probab=99.92 E-value=2.9e-25 Score=239.39 Aligned_cols=202 Identities=12% Similarity=0.158 Sum_probs=157.4
Q ss_pred cccccccccCCchhHhhhcccccccCCchhHHHHHHhh-hcHHHHHHHHHHHHHHcCCCCCChHHHHHHHHHhhhccCCC
Q psy12534 12 VWEPKTYDVKFLVPIRVVLVQLSLSCELPKNHLRATGS-WQSTVLKLGLQKYIKKKAMGSSTQAELWAFLTNAGHEMRTL 90 (343)
Q Consensus 12 ~~~pi~~~v~~~~~i~~~fd~isy~kg~~~~vlrMl~~-lGee~F~~Gl~~YLk~~~y~Na~~~DLw~aL~~~~~~~~~~ 90 (343)
.+|||.. +++.+|...||.|+|.|| ++|||||+. +|++.|++||+.||++|+|+|++++|||++|++++
T Consensus 381 ~~~Pi~~--~~~~~i~~~f~~i~Y~KG--a~VLrML~~~lG~e~F~~gLr~Yl~~~~~~~att~Df~~ale~~s------ 450 (891)
T 3b34_A 381 MAHPIRP--DMVIEMNNFYTLTVYEKG--AEVIRMIHTLLGEENFQKGMQLYFERHDGSAATCDDFVQAMEDAS------ 450 (891)
T ss_dssp TCCCSSC--SEESCGGGGCCHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHTTEEECHHHHHHHHHHHH------
T ss_pred cCCCCcc--ccccccccccccchhhHH--HHHHHHHHHHHCHHHHHHHHHHHHHhccCCCCCHHHHHHHHHHHh------
Confidence 4789865 356789999999999999 999999997 79999999999999999999999999999999998
Q ss_pred CCCCCHHHHHHHhhcCCCCcEEEEEEecC--CC--eEEEEEeecCCccceeeeccccccccCCCCCCCccccccccchhh
Q psy12534 91 PEKMDVETIMNTWTLQTGFPVIRVARDYD--AG--SAVVKQVRGLGFTLIIIVLINTARTELKGPFTPAVGYHYYGAQEL 166 (343)
Q Consensus 91 ~~~~~v~~~m~~W~~Q~GyPvV~V~~~~~--~~--~i~l~Q~rf~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (343)
+.+++.| +.|+.|+|+|+|+|++.++ ++ .++|+|+++ ...+.
T Consensus 451 --g~dL~~f-~~W~~q~G~P~l~V~~~~~~~~~~~~ltl~Q~~~--------~~~~~----------------------- 496 (891)
T 3b34_A 451 --NVDLSHF-RRWYSQSGTPIVTVKDDYNPETEQYTLTISQRTP--------ATPDQ----------------------- 496 (891)
T ss_dssp --CCCCTTT-THHHHCCSCCEEEEEEEEETTTTEEEEEEEEECC--------CBTTB-----------------------
T ss_pred --CCCHHHH-HHHHcCCCCceEEEEEEeecCCCEEEEEEEEecC--------CCCCC-----------------------
Confidence 6788875 6999999999999998754 33 488999988 21110
Q ss_pred hhccccCCCCCccccCCCcccccCCccccccccCCCCCCceEEEEEEEEeCC--CCCcc------cccceEEeecCCcce
Q psy12534 167 RRDLTTRNRPNFRVTKPSHWLRAEPNLTIKQEDLNAESDDWIIFNIQVATRN--RPNFR------VTKPFHWLRAEPNLT 238 (343)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~I~Pit~~~~~--~~~~~------~~~~~~wl~~~~~~~ 238 (343)
.....|+| ||++...+ +.... .....+||+..+ ++
T Consensus 497 -----------------------------------~~~~~~~i-Pi~v~l~~~~G~~~~~~~~~~~~~~~~~l~~~~-~~ 539 (891)
T 3b34_A 497 -----------------------------------AEKQPLHI-PFAIELYDNEGKVIPLQKGGHPVNSVLNVTQAE-QT 539 (891)
T ss_dssp -----------------------------------SCCCCCCE-EEEEEEECTTSCBCCCEETTEECCSEEEECSSE-EE
T ss_pred -----------------------------------CCCceEEE-EEEEEEEcCCCCcccccccccccceEEEecCCc-EE
Confidence 03468999 99997643 21110 002467887665 34
Q ss_pred EEeccCCCCCCCeEEEccCceeEEEEecCHhhHHHHHHHHhcCCCCCCCCHHhHHHHHHHHHHH
Q psy12534 239 IKQEDLNAESDDWIIFNIQQTGYYRVLYDEKNWYLIIATLRNSTTYNTIHLLNRAQLIDDAMNL 302 (343)
Q Consensus 239 i~l~~~~~~~~~wi~~N~~~~GyYRV~YD~~~w~~L~~~L~~~~n~~~i~~~~Ra~Li~D~f~l 302 (343)
+.+++ .....|+.+|.+..|||||+||..+|+.+.. |. ..-+..+|.+.+.+++..
T Consensus 540 ~~~~~--v~~~P~~~l~~~~s~~~~v~~~~~~~~l~~~-l~-----~d~d~~~R~~a~~~L~~~ 595 (891)
T 3b34_A 540 FVFDN--VYFQPVPALLCEFSAPVKLEYKWSDQQLTFL-MR-----HARNDFSRWDAAQSLLAT 595 (891)
T ss_dssp EEECC--CCSCCEEEESTTCCSSCEEECCCCHHHHHHH-HH-----HCSSHHHHHHHHHHHHHH
T ss_pred EEEcc--CCCCCcEEEcCCCcceEEEeCCCCHHHHHHH-Hh-----hCCChhHHHHHHHHHHHH
Confidence 77763 4556799999999999999999999887654 43 234578888887776664
No 8
>3ebh_A PFA-M1, M1 family aminopeptidase; hydrolase, metal-binding, metalloprotease, P hydrolase inhibitor; HET: BES; 1.65A {Plasmodium falciparum} PDB: 3ebg_A* 3ebi_A* 3q43_A* 3q44_A* 3t8v_A*
Probab=99.89 E-value=5.5e-23 Score=221.19 Aligned_cols=186 Identities=17% Similarity=0.116 Sum_probs=139.4
Q ss_pred cccccccccCCchhHhhhcccccccCCchhHHHHHHhh-hcHHHHHHHHHHHHHHcCCCCCChHHHHHHHHHhhhccCCC
Q psy12534 12 VWEPKTYDVKFLVPIRVVLVQLSLSCELPKNHLRATGS-WQSTVLKLGLQKYIKKKAMGSSTQAELWAFLTNAGHEMRTL 90 (343)
Q Consensus 12 ~~~pi~~~v~~~~~i~~~fd~isy~kg~~~~vlrMl~~-lGee~F~~Gl~~YLk~~~y~Na~~~DLw~aL~~~~~~~~~~ 90 (343)
.+|||.. +++.+|...||.|+|.|| ++|||||+. +|++.|++||+.||++|+|+|++++|||++|++++++.. .
T Consensus 364 ~shPI~~--~~~~ei~~~f~~i~Y~KG--a~vLrML~~~lGde~F~~gLr~Yl~~~~~~natt~Df~~ale~as~~~~-~ 438 (889)
T 3ebh_A 364 LSHPIRP--ESYVSMENFYTTTVYDKG--SEVMRMYLTILGEEYYKKGFDIYIKKNDGNTATCEDFNYAMEQAYKMKK-A 438 (889)
T ss_dssp TCCCSSC--SEESCGGGCCCHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHTTSEECHHHHHHHHHHHHHHHH-T
T ss_pred cCCCCCC--cchhhhhhhccchhhhHH--HHHHHHHHHHhCHHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhcc-C
Confidence 5788864 356789999999999999 999999997 799999999999999999999999999999999884321 2
Q ss_pred CCCCCHHHHHHHhhcCCCCcEEEEEEecCC--C--eEEEEEeecCCccceeeeccccccccCCCCCCCccccccccchhh
Q psy12534 91 PEKMDVETIMNTWTLQTGFPVIRVARDYDA--G--SAVVKQVRGLGFTLIIIVLINTARTELKGPFTPAVGYHYYGAQEL 166 (343)
Q Consensus 91 ~~~~~v~~~m~~W~~Q~GyPvV~V~~~~~~--~--~i~l~Q~rf~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (343)
+.+.++.. |++|+.|+|||+|+|+++++. + +++|+|+++ ...+.
T Consensus 439 ~~g~dL~~-f~~Wl~q~G~P~l~V~~~~d~~~~~~~ltl~Q~~~--------~~~~~----------------------- 486 (889)
T 3ebh_A 439 DNSANLNQ-YLLWFSQSGTPHVSFKYNYDAEKKQYSIHVNQYTK--------PDENQ----------------------- 486 (889)
T ss_dssp CTTCCCTG-GGHHHHCCSCCEEEEEEEEETTTTEEEEEEEEECC--------CCSSC-----------------------
T ss_pred CCCCCHHH-HHHHhcCCCCceEEEEEeecCCCCEEEEEEEEecC--------CCCCC-----------------------
Confidence 33678875 689999999999999998753 3 578888887 21110
Q ss_pred hhccccCCCCCccccCCCcccccCCccccccccCCCCCCceEEEEEEEEeCC---CCCcccccceEEeecCCcceEEecc
Q psy12534 167 RRDLTTRNRPNFRVTKPSHWLRAEPNLTIKQEDLNAESDDWIIFNIQVATRN---RPNFRVTKPFHWLRAEPNLTIKQED 243 (343)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~I~Pit~~~~~---~~~~~~~~~~~wl~~~~~~~i~l~~ 243 (343)
.....|.| ||++..-+ +.... ....++|+.. ++++.+++
T Consensus 487 -----------------------------------~~~~~~~I-Pl~v~l~~~~~G~~~~-~~~~l~l~~~-~q~f~~~~ 528 (889)
T 3ebh_A 487 -----------------------------------KEKKPLFI-PISVGLINPENGKEMI-SQTTLELTKE-SDTFVFNN 528 (889)
T ss_dssp -----------------------------------SSCCCCCE-EEEEEEECTTTCCBCS-CCEEEEECSS-EEEEEESC
T ss_pred -----------------------------------CCCceEEE-EEEEEEEeCCCCcccc-ceeEEEecCC-cEEEEEcC
Confidence 03468999 99998632 22110 0234556554 45577763
Q ss_pred CCCCCCCeEEEccCceeEEEEecC--HhhHHHH
Q psy12534 244 LNAESDDWIIFNIQQTGYYRVLYD--EKNWYLI 274 (343)
Q Consensus 244 ~~~~~~~wi~~N~~~~GyYRV~YD--~~~w~~L 274 (343)
.....+..+|.+..+++|+.|+ .+.+..|
T Consensus 529 --~~~~p~~sl~r~fsa~v~l~~~~~~~~l~~l 559 (889)
T 3ebh_A 529 --IAVKPIPSLFRGFSAPVYIEDQLTDEERILL 559 (889)
T ss_dssp --CCSCCEEEESTTCCSSSEEECCCCHHHHHHH
T ss_pred --CCCCCeEEEcCCCCceEEEeCCCCHHHHHHH
Confidence 3445577899999999999976 4444333
No 9
>3cia_A Cold-active aminopeptidase; psychrohilic, hydrolase; 2.70A {Colwellia psychrerythraea}
Probab=99.78 E-value=4.5e-21 Score=199.03 Aligned_cols=197 Identities=13% Similarity=0.086 Sum_probs=150.4
Q ss_pred ccccccccccCCchhHhhhcccccccCCchhHHHHHHhh-hcHHHHHHHHHHHHHHcCCCCCChHHHHHHHHHhhhccCC
Q psy12534 11 LVWEPKTYDVKFLVPIRVVLVQLSLSCELPKNHLRATGS-WQSTVLKLGLQKYIKKKAMGSSTQAELWAFLTNAGHEMRT 89 (343)
Q Consensus 11 ~~~~pi~~~v~~~~~i~~~fd~isy~kg~~~~vlrMl~~-lGee~F~~Gl~~YLk~~~y~Na~~~DLw~aL~~~~~~~~~ 89 (343)
-..||+..++. ..++...||.|+|.|| ++|||||+. +|++.|++||+.|+++|+|+|++++|||++|++++...
T Consensus 363 ~~~~pl~~~~~-~~~~~~~f~~i~Y~KG--a~vl~mL~~~lG~e~F~~~lr~yl~~~~~~~~t~~df~~~l~~~~~~~-- 437 (605)
T 3cia_A 363 ASDTQLYIDLK-GRDPDDAFSGVPYVKG--QLFLMYLEEKFGRERFDAFVLEYFDSHAFQSLGTDNFVKYLKANLTDK-- 437 (605)
T ss_dssp TTTTSSSCCCT-TCCTTTSCCSHHHHHH--HHHHHHHHHHHCHHHHHHHHHHHHHHTTTEEECHHHHHHHHHHTTTTT--
T ss_pred cCCCCcccCCC-CCChhHhhCccchhHH--HHHHHHHHHHhChHHHHHHHHHHHHHhCcCCCCHHHHHHHHHHHhccc--
Confidence 45799888776 3567889999999999 999999997 79999999999999999999999999999999987421
Q ss_pred CCCCCCHHH-HHHHhhcCCCCcEEEEEEecCCCeEEEEEeecCCccceeeeccccccccCCCCCCCccccccccchhhhh
Q psy12534 90 LPEKMDVET-IMNTWTLQTGFPVIRVARDYDAGSAVVKQVRGLGFTLIIIVLINTARTELKGPFTPAVGYHYYGAQELRR 168 (343)
Q Consensus 90 ~~~~~~v~~-~m~~W~~Q~GyPvV~V~~~~~~~~i~l~Q~rf~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (343)
. +.++.. +|++|+.|+|+|+|+|+.+ .+ .. . . ...
T Consensus 438 ~--~~~l~~~~~~~W~~~~G~P~~~~~~~--~~-------~~---------~-~--~~~--------------------- 473 (605)
T 3cia_A 438 Y--PNIVSDNEINEWIFKAGLPSYAPQPT--SN-------AF---------K-V--IDK--------------------- 473 (605)
T ss_dssp S--TTSSCHHHHHHHHHSSSCCSSSCCCC--CH-------HH---------H-H--HHH---------------------
T ss_pred c--ccccchhhHHHHhcCCCCCceeccCC--ch-------HH---------H-H--HHH---------------------
Confidence 1 123333 6899999999999987643 21 01 0 0 000
Q ss_pred ccccCCCCCccccCCCcccccCCccccccccCCCCCCceEEEEEEEEeCCCCCcccccceEEeecCCcceEEeccCCCCC
Q psy12534 169 DLTTRNRPNFRVTKPSHWLRAEPNLTIKQEDLNAESDDWIIFNIQVATRNRPNFRVTKPFHWLRAEPNLTIKQEDLNAES 248 (343)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~I~Pit~~~~~~~~~~~~~~~~wl~~~~~~~i~l~~~~~~~ 248 (343)
....|.- .... ..
T Consensus 474 ----------------------------------l~~~w~~-----------------------~~~~---------~~- 486 (605)
T 3cia_A 474 ----------------------------------QINQLVT-----------------------DELT---------LE- 486 (605)
T ss_dssp ----------------------------------HTCCTTT-----------------------TSSC---------CS-
T ss_pred ----------------------------------HHHHHHh-----------------------cCCC---------cc-
Confidence 1122321 1100 00
Q ss_pred CCeEEEccCceeEEEEecCHhhHHHHHHHHhcCCCCCCCCHHhHHHHHHHHHHHHHcCCCCHHHHHHHHHhcccCCChhH
Q psy12534 249 DDWIIFNIQQTGYYRVLYDEKNWYLIIATLRNSTTYNTIHLLNRAQLIDDAMNLARAGLLDYKIALDVTAYLQYETELVP 328 (343)
Q Consensus 249 ~~wi~~N~~~~GyYRV~YD~~~w~~L~~~L~~~~n~~~i~~~~Ra~Li~D~f~la~ag~l~~~~~L~l~~yL~~E~~~~~ 328 (343)
.+.|++|+..+|..+++.|. + .|+ .+|+++|+|+|+|+.++.. ++.+..++++.++.++.+
T Consensus 487 -----------~~~~~~~~~~~~~~~l~~l~--~---~l~-~~~~~~l~~~~~~~~~~n~--ei~~~~~~~~~~~~~~~~ 547 (605)
T 3cia_A 487 -----------QLPTAQWTLHEWLHFINNLP--V---DLD-HQRMVNLDKAFDLTNSSNA--EIAHAWYLLSVRADYKEV 547 (605)
T ss_dssp -----------CSGGGGCCSHHHHHHHHHSC--S---CCT-TC-CHHHHHHHCCSSCSSH--HHHHHHHHHHHHHTCGGG
T ss_pred -----------ccchhhCCHHHHHHHHHhcC--c---cCC-HHHHHHHHHhhCCCcCCCH--HHHHHHHHHHHhcCChhH
Confidence 11289999999999999995 2 588 9999999999998887654 789999999999999999
Q ss_pred HHHHHHHHHHHHhc
Q psy12534 329 WRSAMQALGYIEGQ 342 (343)
Q Consensus 329 w~~~~~~L~~i~~l 342 (343)
|..+...|..+.+|
T Consensus 548 ~~~~~~~l~~~gr~ 561 (605)
T 3cia_A 548 YPAMAKYLKSIGRR 561 (605)
T ss_dssp HHHHHHHHHHCCCS
T ss_pred HHHHHHHHHHcCCc
Confidence 99999998876544
No 10
>3u9w_A Leukotriene A-4 hydrolase; hydrolase-hydrolase inhibitor complex; HET: 28P; 1.25A {Homo sapiens} PDB: 3cho_A* 3chp_A* 3chq_A* 3chr_A* 3chs_A* 3fun_A* 1hs6_A* 2vj8_A* 3fh7_A* 3fh8_A* 3fhe_A* 3fts_A* 3ftu_A* 3ftv_A* 3ftw_A* 3ftx_A* 3fty_A* 3ftz_A* 3fu0_A* 3fu3_A* ...
Probab=99.67 E-value=3.3e-18 Score=177.67 Aligned_cols=110 Identities=20% Similarity=0.126 Sum_probs=95.8
Q ss_pred ccccccccccCCchhH--hhhcccccccCCchhHHHHHHhh-hc-HHHHHHHHHHHHHHcCCCCCChHHHHHHHHHhhhc
Q psy12534 11 LVWEPKTYDVKFLVPI--RVVLVQLSLSCELPKNHLRATGS-WQ-STVLKLGLQKYIKKKAMGSSTQAELWAFLTNAGHE 86 (343)
Q Consensus 11 ~~~~pi~~~v~~~~~i--~~~fd~isy~kg~~~~vlrMl~~-lG-ee~F~~Gl~~YLk~~~y~Na~~~DLw~aL~~~~~~ 86 (343)
-.+||+..+|.++.++ ...||.|+|.|| +++||||+. +| ++.|++||+.||++|+|+|++++|||++|++++.
T Consensus 355 ~~~~p~~~~~~~~~~~~~~~~f~~i~Y~KG--a~vL~mL~~~lG~~~~F~~~lr~Yl~~~~~~~~tt~Df~~~l~~~~~- 431 (608)
T 3u9w_A 355 GETHPFTKLVVDLTDIDPDVAYSSVPYEKG--FALLFYLEQLLGGPEIFLGFLKAYVEKFSYKSITTDDWKDFLYSYFK- 431 (608)
T ss_dssp CTTCGGGSSSCCCTTCCHHHHCSSHHHHHH--HHHHHHHHHHHTCHHHHHHHHHHHHHHHTTEEECHHHHHHHHHHHTG-
T ss_pred hccCCccccccccccCChhhcccHHHHhHH--HHHHHHHHHHhCCHHHHHHHHHHHHHhccCCCCCHHHHHHHHHHHhc-
Confidence 4589999999988876 568999999999 999999997 77 7899999999999999999999999999999984
Q ss_pred cCCCCCCCCHHHH----HHHhhcCCCCcEEEEEEecCC--CeEEEEEeec
Q psy12534 87 MRTLPEKMDVETI----MNTWTLQTGFPVIRVARDYDA--GSAVVKQVRG 130 (343)
Q Consensus 87 ~~~~~~~~~v~~~----m~~W~~Q~GyPvV~V~~~~~~--~~i~l~Q~rf 130 (343)
.++..+ |++|+.|+|||+|+|+++++. +.+.|+|+++
T Consensus 432 -------~~~~~~~~~~~~~W~~~~G~P~v~v~~d~~~~~~~~~l~q~~~ 474 (608)
T 3u9w_A 432 -------DKVDVLNQVDWNAWLYSPGLPPIKPNYDMTLTNACIALSQRWI 474 (608)
T ss_dssp -------GGHHHHHTSCHHHHHHCCSSCSSCCCCCCTTTHHHHHHHHHHH
T ss_pred -------cccchhhHHHHHHHhcCCCCCceeeeeccccccceeeHHhHHh
Confidence 355555 999999999999999987643 3467888777
No 11
>2xq0_A LTA-4 hydrolase, leukotriene A-4 hydrolase; HET: BES; 1.96A {Saccharomyces cerevisiae} PDB: 2xpz_A* 2xpy_A*
Probab=99.61 E-value=7.4e-18 Score=175.81 Aligned_cols=207 Identities=13% Similarity=0.094 Sum_probs=146.5
Q ss_pred cccc---cccccCCchhHhhhcccccccCCchhHHHHHHhh-hcH-HHHHHHHHHHHHHcCCCCCChHHHHHHHHHhhhc
Q psy12534 12 VWEP---KTYDVKFLVPIRVVLVQLSLSCELPKNHLRATGS-WQS-TVLKLGLQKYIKKKAMGSSTQAELWAFLTNAGHE 86 (343)
Q Consensus 12 ~~~p---i~~~v~~~~~i~~~fd~isy~kg~~~~vlrMl~~-lGe-e~F~~Gl~~YLk~~~y~Na~~~DLw~aL~~~~~~ 86 (343)
..|| +..++.+..++...||.|+|.|| ++|||||+. +|+ ++|++||+.|+++|+|+|++++|||++|++++.+
T Consensus 364 ~~~pl~~l~~~~~~~~~~~~~f~~i~Y~KG--a~vL~mL~~~lG~~e~F~~~Lr~Yl~~~~~~~~tt~Df~~~l~~~~~~ 441 (632)
T 2xq0_A 364 DPERFSTLVQNLNDNTDPDDAFSTVPYEKG--FNLLFHLETILGGKAEFDPFIRHYFKKFAKKSLDTFQFLDTLYEFYPE 441 (632)
T ss_dssp SHHHHTSSSCCCCSSSCGGGGCSSHHHHHH--HHHHHHHHHHTTSHHHHHHHHHHHHHHTTTEEECHHHHHHHHHHHCGG
T ss_pred cCCCCcccccCCCCCCChHHhccchhhHHH--HHHHHHHHHHhCChHHHHHHHHHHHHHhCcCCCCHHHHHHHHHHHhhh
Confidence 4688 55666656788899999999999 999999997 899 9999999999999999999999999999998742
Q ss_pred cCCCCCCCCHHH-HHHHhhcCCCCcEEEEEEecCCCeEEEEEeecCCccceeeeccccccccCCCCCCCccccccccchh
Q psy12534 87 MRTLPEKMDVET-IMNTWTLQTGFPVIRVARDYDAGSAVVKQVRGLGFTLIIIVLINTARTELKGPFTPAVGYHYYGAQE 165 (343)
Q Consensus 87 ~~~~~~~~~v~~-~m~~W~~Q~GyPvV~V~~~~~~~~i~l~Q~rf~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (343)
. +.++.. +|++|+.|+|||+ +++.+ .+. . . . .. +
T Consensus 442 ~-----~~~l~~~~~~~W~~~~G~P~-~~~~~--~~~-------~---------~-~--~~------------------~ 476 (632)
T 2xq0_A 442 K-----KEILDSVDWETWLYKPGMPP-RPHFI--TAL-------A---------D-N--VY------------------Q 476 (632)
T ss_dssp G-----HHHHHTSCHHHHHHCCSCCC-CCCCC--CHH-------H---------H-H--HH------------------H
T ss_pred c-----cccccHHHHHHHhcCCCCCC-CcCCC--chH-------H---------H-H--HH------------------H
Confidence 1 134555 6999999999999 65432 210 0 0 0 00 0
Q ss_pred hhhccccCCCCCccccCCCcccccCCccccccccCCCCCCceEEEEEEEEeCCCCCcccccceEEeecCCcceEEeccCC
Q psy12534 166 LRRDLTTRNRPNFRVTKPSHWLRAEPNLTIKQEDLNAESDDWIIFNIQVATRNRPNFRVTKPFHWLRAEPNLTIKQEDLN 245 (343)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~I~Pit~~~~~~~~~~~~~~~~wl~~~~~~~i~l~~~~ 245 (343)
....|.. ..+ ....+ ...++ .+.
T Consensus 477 -------------------------------------l~~~w~~-~~~---~~~~~-~~~~~------------~~~--- 499 (632)
T 2xq0_A 477 -------------------------------------LADKWVE-MAQ---HLKTT-EDFRS------------EFN--- 499 (632)
T ss_dssp -------------------------------------HHHHHHH-HTT---TCCSH-HHHHH------------HCC---
T ss_pred -------------------------------------HHHHHHh-ccc---ccccc-ccccc------------CCC---
Confidence 1123322 110 00000 00000 000
Q ss_pred CCCCCeEEEccCceeEEEEecCHhhHHHHHHHHhcCCC----------CCCCCHHhHHHHHHHHHH--HHHcCCCCHHHH
Q psy12534 246 AESDDWIIFNIQQTGYYRVLYDEKNWYLIIATLRNSTT----------YNTIHLLNRAQLIDDAMN--LARAGLLDYKIA 313 (343)
Q Consensus 246 ~~~~~wi~~N~~~~GyYRV~YD~~~w~~L~~~L~~~~n----------~~~i~~~~Ra~Li~D~f~--la~ag~l~~~~~ 313 (343)
.. +.. +|+...|..+++.|. .+ ...++ .+|+++++|+|. |+.++. .++.
T Consensus 500 --~~-----d~~-------~~~~~~~~~fl~~l~--~~~~~~~~~~~~~~~l~-~~~~~~l~~~~~~~~~~~~n--~ei~ 560 (632)
T 2xq0_A 500 --AI-----DIK-------DFNSNQLVLFLETLT--QNGHSNKKPKDFDWAKF-PVASRALLDIYQDNIVKSQN--AEVV 560 (632)
T ss_dssp --GG-----GGT-------TCCHHHHHHHHHHHH--TTCSSTTSCSCCCGGGC-HHHHHHHHHHTCCCCCTCCC--HHHH
T ss_pred --HH-----HHh-------hCCHHHHHHHHHHHH--hcccccccccccCCCCC-HHHHHHHHHHHhhhhccCcC--HHHH
Confidence 00 111 789999999999996 32 22577 999999999998 666654 4899
Q ss_pred HHHHHhcccCCChhHHHHHHHHHHHHHh
Q psy12534 314 LDVTAYLQYETELVPWRSAMQALGYIEG 341 (343)
Q Consensus 314 L~l~~yL~~E~~~~~w~~~~~~L~~i~~ 341 (343)
+..++++.++....+|..+...|..+.+
T Consensus 561 ~~~~~~~~~~~~~~~~~~~~~~l~~~gr 588 (632)
T 2xq0_A 561 FKMFKFQIFAKLQEEYKHLADWLGTVGR 588 (632)
T ss_dssp HHHHHHHHHTTCGGGHHHHHHHTTTCCC
T ss_pred HHHHHHHHhcCChhHHHHHHHHHHHcCC
Confidence 9999999999999999999988876543
No 12
>4fgm_A Aminopeptidase N family protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, peptidase_M61, PDZ; 2.39A {Idiomarina loihiensis L2TR}
Probab=96.59 E-value=0.0015 Score=67.72 Aligned_cols=67 Identities=4% Similarity=-0.046 Sum_probs=58.6
Q ss_pred cccCCchhHHHHHHhh-h-----cHHHHHHHHHHHHHHcCC--CCCChHHHHHHHHHhhhccCCCCCCCCHHHHHHHhhc
Q psy12534 34 SLSCELPKNHLRATGS-W-----QSTVLKLGLQKYIKKKAM--GSSTQAELWAFLTNAGHEMRTLPEKMDVETIMNTWTL 105 (343)
Q Consensus 34 sy~kg~~~~vlrMl~~-l-----Gee~F~~Gl~~YLk~~~y--~Na~~~DLw~aL~~~~~~~~~~~~~~~v~~~m~~W~~ 105 (343)
.|.|| +.++.||.. | |++.|+++++.|+++|.+ ++++.+||..++++++ +.++..+++.|+.
T Consensus 376 ~Y~KG--alv~~~LD~~lR~~s~g~~sldd~mr~l~~~~~~~~~~~t~~d~~~~~e~~s--------G~dl~~ff~~~l~ 445 (597)
T 4fgm_A 376 YYAKG--ALIALSLDLMLRLQSDHKLTLARVMKELWHEFGKTSIGTADDTVINWLNQYP--------GIDISDFLKDALY 445 (597)
T ss_dssp TTHHH--HHHHHHHHHHHHHHTTTSCCHHHHHHHHHHHHTTTTCCBCTTHHHHHHHTST--------TCCCHHHHHHHHH
T ss_pred cchHH--HHHHHHHHHHHHhhcCCchHHHHHHHHHHHHhCcCCCCCCHHHHHHHHHHhc--------CcCHHHHHHHHHh
Confidence 37777 999999875 5 446899999999999986 6899999999999998 7899999999999
Q ss_pred CCCCc
Q psy12534 106 QTGFP 110 (343)
Q Consensus 106 Q~GyP 110 (343)
.++.|
T Consensus 446 ~t~~~ 450 (597)
T 4fgm_A 446 NKESL 450 (597)
T ss_dssp SCSCC
T ss_pred CCCCc
Confidence 99873
Done!