RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy12534
         (343 letters)



>d3b7sa3 d.92.1.13 (A:209-460) Leukotriene A4 hydrolase catalytic
           domain {Human (Homo sapiens) [TaxId: 9606]}
          Length = 252

 Score = 44.6 bits (104), Expect = 7e-06
 Identities = 12/65 (18%), Positives = 23/65 (35%), Gaps = 4/65 (6%)

Query: 50  WQSTVLKLGLQKYIKKKAMGSSTQAELWAFLTNAGHEMRTLPEKMDVETIMNTWTLQTGF 109
               +    L+ Y++K +  S T  +   FL +   +       +  +   N W    G 
Sbjct: 190 GGPEIFLGFLKAYVEKFSYKSITTDDWKDFLYSYFKD----KVDVLNQVDWNAWLYSPGL 245

Query: 110 PVIRV 114
           P I+ 
Sbjct: 246 PPIKP 250


>d1o3ua_ a.24.16.3 (A:) Hypothetical protein TM0613 {Thermotoga
           maritima [TaxId: 2336]}
          Length = 126

 Score = 26.5 bits (58), Expect = 2.5
 Identities = 17/103 (16%), Positives = 28/103 (27%), Gaps = 7/103 (6%)

Query: 229 HWLR-AEPNLTIKQEDLNAESDDWIIFNIQQTGYYRVLYDEKNWYLIIATLRNSTTYNTI 287
           H +  A+ +L   + DL     +W  F+ QQ     V        +       +  Y+  
Sbjct: 2   HHMDAAKDDLEHAKHDLEHGFYNWACFSSQQAAEKAVK------AVFQRMGAQAWGYSVP 55

Query: 288 HLLNRAQLIDDAMNLARAGLLDYKIALDVTAYLQYETELVPWR 330
             L       +         L+   A   T Y        P  
Sbjct: 56  DFLGELSSRFEIPEELMDHALELDKACIPTRYPDALPSGSPRN 98


>d1t6ex_ b.50.1.2 (X:) Xylanase inhibitor TAXI-I {Wheat (Triticum
           aestivum) [TaxId: 4565]}
          Length = 381

 Score = 27.3 bits (59), Expect = 3.0
 Identities = 6/39 (15%), Positives = 15/39 (38%), Gaps = 1/39 (2%)

Query: 245 NAESDDWIIFNIQQTGYYRVLYDEKNWYLIIATLRNSTT 283
           +  +   I+   Q   +  + +D +   L  + L + T 
Sbjct: 340 DGRAPAVILGGAQMEDFV-LDFDMEKKRLGFSRLPHFTG 377


>d1ufba_ a.24.16.3 (A:) Hypothetical protein TT1696 {Thermus
           thermophilus [TaxId: 274]}
          Length = 127

 Score = 25.0 bits (54), Expect = 9.7
 Identities = 11/34 (32%), Positives = 11/34 (32%), Gaps = 1/34 (2%)

Query: 229 HWLR-AEPNLTIKQEDLNAESDDWIIFNIQQTGY 261
            WL  A  NL   Q  L      W  F  QQ   
Sbjct: 6   DWLEQARHNLRHAQGSLGLGDYAWACFAAQQAAE 39


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.321    0.135    0.413 

Gapped
Lambda     K      H
   0.267   0.0425    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,295,924
Number of extensions: 59570
Number of successful extensions: 114
Number of sequences better than 10.0: 1
Number of HSP's gapped: 113
Number of HSP's successfully gapped: 5
Length of query: 343
Length of database: 2,407,596
Length adjustment: 86
Effective length of query: 257
Effective length of database: 1,226,816
Effective search space: 315291712
Effective search space used: 315291712
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 53 (25.0 bits)