Query psy12540
Match_columns 79
No_of_seqs 107 out of 168
Neff 4.5
Searched_HMMs 13730
Date Fri Aug 16 21:56:05 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy12540.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/12540hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1oyza_ a.118.1.16 (A:) Hypoth 63.4 9.4 0.00068 22.9 5.5 25 11-35 24-48 (276)
2 d1te4a_ a.118.1.16 (A:) MTH187 61.0 6.1 0.00045 21.7 4.0 41 11-54 27-67 (111)
3 d1oyza_ a.118.1.16 (A:) Hypoth 53.7 16 0.0011 21.8 5.3 62 11-72 55-119 (276)
4 d1ibrb_ a.118.1.1 (B:) Importi 53.5 19 0.0014 22.6 5.9 53 9-61 3-58 (458)
5 d1t06a_ a.118.1.17 (A:) Hypoth 49.2 7.2 0.00052 25.7 3.3 32 9-40 153-185 (235)
6 d1xgsa1 a.4.5.25 (A:195-271) M 47.3 1 7.3E-05 25.7 -1.2 35 36-74 5-39 (77)
7 d1jb0j_ f.23.18.1 (J:) Subunit 46.0 3.3 0.00024 21.7 0.9 21 25-45 21-41 (41)
8 d2b6ca1 a.118.1.17 (A:3-215) H 45.4 11 0.00083 24.0 3.8 30 13-42 161-190 (213)
9 d2bpta1 a.118.1.1 (A:1-861) Im 43.9 37 0.0027 23.1 6.5 60 11-70 229-296 (861)
10 d2g7sa2 a.121.1.1 (A:77-192) P 43.1 16 0.0012 20.3 3.9 32 2-33 83-114 (116)
11 d2vglb_ a.118.1.10 (B:) Adapti 40.5 16 0.0011 26.0 4.2 25 16-40 56-80 (579)
12 d1ibrb_ a.118.1.1 (B:) Importi 39.9 39 0.0028 21.1 6.2 61 10-70 220-288 (458)
13 d2f4mb1 a.189.1.1 (B:275-332) 39.1 6.7 0.00049 21.6 1.6 18 24-41 23-40 (58)
14 d2vglb_ a.118.1.10 (B:) Adapti 38.7 27 0.002 24.7 5.3 64 14-77 91-155 (579)
15 d1qgra_ a.118.1.1 (A:) Importi 33.5 67 0.0049 21.9 6.8 62 11-72 222-291 (876)
16 d1dvpa1 a.118.9.2 (A:1-145) Hr 31.7 25 0.0018 21.1 3.6 42 5-48 25-66 (145)
17 d1te4a_ a.118.1.16 (A:) MTH187 30.9 37 0.0027 18.1 5.0 50 11-63 58-107 (111)
18 d1kfia3 c.84.1.1 (A:324-443) E 29.1 25 0.0018 20.6 3.2 35 2-37 85-119 (120)
19 d1j2jb_ a.7.8.1 (B:) ADP-ribos 25.8 32 0.0023 17.6 2.8 21 49-69 15-35 (41)
20 d1w5fa1 c.32.1.1 (A:22-215) Ce 24.4 13 0.00097 24.0 1.3 46 29-75 105-151 (194)
21 d1di2a_ d.50.1.1 (A:) Double-s 22.9 20 0.0015 18.9 1.7 19 50-68 50-68 (69)
22 d1rq2a1 c.32.1.1 (A:8-205) Cel 22.5 16 0.0012 23.7 1.5 30 46-75 123-152 (198)
23 d1juqa_ a.118.9.2 (A:) ADP-rib 21.9 40 0.0029 20.4 3.3 41 6-48 23-63 (151)
24 d2dixa1 d.50.1.1 (A:7-79) Inte 21.7 47 0.0034 17.4 3.2 23 49-71 50-72 (73)
25 d1n5ua1 a.126.1.1 (A:2-196) Se 21.5 25 0.0018 22.3 2.2 19 22-40 130-148 (195)
26 d1ofua1 c.32.1.1 (A:11-208) Ce 21.5 16 0.0012 23.7 1.3 46 29-75 106-152 (198)
27 d2oc6a1 d.198.4.1 (A:1-123) Un 21.3 32 0.0023 20.0 2.6 23 54-76 14-36 (123)
28 d1ixca2 c.94.1.1 (A:90-294) Ly 20.9 22 0.0016 19.6 1.6 27 14-40 5-31 (205)
29 d1x48a1 d.50.1.1 (A:8-83) dsRN 20.9 23 0.0017 19.3 1.7 24 50-73 48-71 (76)
30 d2b7ta1 d.50.1.1 (A:1-73) dsRN 20.5 26 0.0019 18.9 1.8 20 50-69 52-71 (73)
No 1
>d1oyza_ a.118.1.16 (A:) Hypothetical protein YibA {Escherichia coli [TaxId: 562]}
Probab=63.38 E-value=9.4 Score=22.91 Aligned_cols=25 Identities=16% Similarity=-0.020 Sum_probs=14.8
Q ss_pred HHHHhcCCCchhhHHHHHHHHHHhh
Q psy12540 11 AFLKRKRKSKLIGGPVQAYLSDIGK 35 (79)
Q Consensus 11 ~iaRi~s~~~~vr~li~~LL~~IGk 35 (79)
++--++.+++.||..-...|..+|.
T Consensus 24 L~~~L~d~~~~vR~~A~~~L~~~~~ 48 (276)
T d1oyza_ 24 LFRLLDDHNSLKRISSARVLQLRGG 48 (276)
T ss_dssp HHHHTTCSSHHHHHHHHHHHHHHCC
T ss_pred HHHHhcCCCHHHHHHHHHHHHhhCC
Confidence 5555566666666666666666553
No 2
>d1te4a_ a.118.1.16 (A:) MTH187 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=60.97 E-value=6.1 Score=21.72 Aligned_cols=41 Identities=17% Similarity=0.167 Sum_probs=22.2
Q ss_pred HHHHhcCCCchhhHHHHHHHHHHhhhCchhhhhhhhhcccCCCH
Q psy12540 11 AFLKRKRKSKLIGGPVQAYLSDIGKRHPQALVYPLTVASKSNSS 54 (79)
Q Consensus 11 ~iaRi~s~~~~vr~li~~LL~~IGk~HPQALvYPLtVA~KS~s~ 54 (79)
++..+..+++.||......|..+|. |++ +=+|.-+.++++.
T Consensus 27 L~~~l~d~~~~vR~~a~~~L~~~~~--~~~-~~~L~~~l~d~~~ 67 (111)
T d1te4a_ 27 LLESLSNEDWRIRGAAAWIIGNFQD--ERA-VEPLIKLLEDDSG 67 (111)
T ss_dssp HHHGGGCSCHHHHHHHHHHHGGGCS--HHH-HHHHHHHHHHCCT
T ss_pred HHHHHcCCCHHHHHHHHHHHHhcch--hhh-HHHHHhhhccchh
Confidence 4556667777777766666654442 222 3334444455444
No 3
>d1oyza_ a.118.1.16 (A:) Hypothetical protein YibA {Escherichia coli [TaxId: 562]}
Probab=53.69 E-value=16 Score=21.84 Aligned_cols=62 Identities=18% Similarity=0.104 Sum_probs=36.1
Q ss_pred HHHHhcCCCchhhHHHHHHHHHHhhhCc--hhhhhhh-hhcccCCCHHHHHHHHHHHHHHHhhCH
Q psy12540 11 AFLKRKRKSKLIGGPVQAYLSDIGKRHP--QALVYPL-TVASKSNSSSRRNAANKILQSMCDLSP 72 (79)
Q Consensus 11 ~iaRi~s~~~~vr~li~~LL~~IGk~HP--QALvYPL-tVA~KS~s~~R~~aA~~Il~~mr~hsp 72 (79)
++..+..+++.||......|..+|...+ ...+..| ....++++..-+.+|-.-|.+|..+.+
T Consensus 55 l~~~l~d~~~~vr~~a~~aL~~l~~~~~~~~~~~~~l~~~~l~d~~~~vr~~a~~aL~~~~~~~~ 119 (276)
T d1oyza_ 55 AIEFCSDKNYIRRDIGAFILGQIKICKKCEDNVFNILNNMALNDKSACVRATAIESTAQRCKKNP 119 (276)
T ss_dssp HHHHHTCSSHHHHHHHHHHHHHSCCCTTTHHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHHHHCG
T ss_pred HHHHHcCCCHHHHHHHHHHHHHhccccccccchHHHHHHHHhcCCChhHHHHHHHHHHHHccccc
Confidence 3455677788888888888877764332 2222222 223455555555666666677765543
No 4
>d1ibrb_ a.118.1.1 (B:) Importin beta {Human (Homo sapiens) [TaxId: 9606]}
Probab=53.48 E-value=19 Score=22.59 Aligned_cols=53 Identities=19% Similarity=0.160 Sum_probs=39.2
Q ss_pred HHHHHHhcCCCchhhHHHHHHHHHHhhhC-chhhhhhhhhcccC--CCHHHHHHHH
Q psy12540 9 LCAFLKRKRKSKLIGGPVQAYLSDIGKRH-PQALVYPLTVASKS--NSSSRRNAAN 61 (79)
Q Consensus 9 ~~~iaRi~s~~~~vr~li~~LL~~IGk~H-PQALvYPLtVA~KS--~s~~R~~aA~ 61 (79)
.++|...-+||..+|+--.+.|.+.-+.. |..+.+=+.+.... +...|..||.
T Consensus 3 ~~il~~~~s~d~~~r~~A~~~L~~~~~~~~~~~~~~l~~il~~~~~~~~~R~~A~i 58 (458)
T d1ibrb_ 3 ITILEKTVSPDRLELEAAQKFLERAAVENLPTFLVELSRVLANPGNSQVARVAAGL 58 (458)
T ss_dssp HHHHHHTTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHHH
T ss_pred HHHHHHHhCcCHHHHHHHHHHHHHHHhcCchHHHHHHHHHHhcCCCCHHHHHHHHH
Confidence 46788899999999999999999998877 56676666665333 2345665554
No 5
>d1t06a_ a.118.1.17 (A:) Hypothetical protein BC3264 {Bacillus cereus (strain ATCC 14579 / DSM 31) [TaxId: 226900]}
Probab=49.19 E-value=7.2 Score=25.68 Aligned_cols=32 Identities=6% Similarity=0.044 Sum_probs=26.8
Q ss_pred HHHHHH-hcCCCchhhHHHHHHHHHHhhhCchh
Q psy12540 9 LCAFLK-RKRKSKLIGGPVQAYLSDIGKRHPQA 40 (79)
Q Consensus 9 ~~~iaR-i~s~~~~vr~li~~LL~~IGk~HPQA 40 (79)
|..+.+ |+.+...|+..+--.|..||+.+|--
T Consensus 153 L~~~~~~i~d~~~~v~kAv~W~Lr~ig~~~~~l 185 (235)
T d1t06a_ 153 LEMVKDTIHHSPERTKSAMNNFLNTVAISYVPL 185 (235)
T ss_dssp HHHHHHHGGGSCHHHHHHHHHHHHHHHHHCGGG
T ss_pred HHHHHHhccCchHHHHHHHHHHHHHHhccChHH
Confidence 344444 88989999999999999999999973
No 6
>d1xgsa1 a.4.5.25 (A:195-271) Methionine aminopeptidase, insert domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=47.26 E-value=1 Score=25.69 Aligned_cols=35 Identities=20% Similarity=0.180 Sum_probs=25.1
Q ss_pred hCchhhhhhhhhcccCCCHHHHHHHHHHHHHHHhhCHhh
Q psy12540 36 RHPQALVYPLTVASKSNSSSRRNAANKILQSMCDLSPLL 74 (79)
Q Consensus 36 ~HPQALvYPLtVA~KS~s~~R~~aA~~Il~~mr~hsp~L 74 (79)
+-|++-||.++. +. ..|.+.|.++++.+.+.+++|
T Consensus 5 e~~~~~Iy~~~~---~~-plr~~~ar~ll~~I~~~f~tL 39 (77)
T d1xgsa1 5 EVPPTLIYMYVR---DV-PVRVAQARFLLAKIKREYGTL 39 (77)
T ss_dssp EEEEEEEEEECC---CC-CCSSHHHHHHHHHHHHHTTTS
T ss_pred eCCCceEEEEeC---CC-CCCCHHHHHHHHHHHHHCCCc
Confidence 346777888752 22 347788899999999888765
No 7
>d1jb0j_ f.23.18.1 (J:) Subunit IX of photosystem I reaction centre, PsaJ {Synechococcus elongatus [TaxId: 32046]}
Probab=45.99 E-value=3.3 Score=21.70 Aligned_cols=21 Identities=24% Similarity=0.341 Sum_probs=18.5
Q ss_pred HHHHHHHHHhhhCchhhhhhh
Q psy12540 25 PVQAYLSDIGKRHPQALVYPL 45 (79)
Q Consensus 25 li~~LL~~IGk~HPQALvYPL 45 (79)
+...+|++|-+=+|-+|.+||
T Consensus 21 ~tAG~lIEiNRFfPD~L~~Pl 41 (41)
T d1jb0j_ 21 ITAGILIEFNRFYPDLLFHPL 41 (41)
T ss_dssp HHHHHHHHHHHHSCCCSSCCC
T ss_pred HHHHHHHHHHhhCchhhcCCC
Confidence 456789999999999999986
No 8
>d2b6ca1 a.118.1.17 (A:3-215) Hypothetical protein EF3068 {Enterococcus faecalis [TaxId: 1351]}
Probab=45.45 E-value=11 Score=23.99 Aligned_cols=30 Identities=20% Similarity=0.215 Sum_probs=26.5
Q ss_pred HHhcCCCchhhHHHHHHHHHHhhhCchhhh
Q psy12540 13 LKRKRKSKLIGGPVQAYLSDIGKRHPQALV 42 (79)
Q Consensus 13 aRi~s~~~~vr~li~~LL~~IGk~HPQALv 42 (79)
.-+++++.-|++-|--.|-++|+.+|+.++
T Consensus 161 ~~~~d~e~~i~kAigW~Lre~~k~~p~~v~ 190 (213)
T d2b6ca1 161 YDRTTEEFFIQKAIGWSLRQYSKTNPQWVE 190 (213)
T ss_dssp HTTTCCCHHHHHHHHHHHHHHTTTCHHHHH
T ss_pred HhCCChHHHHHHHHHHHHHHHHHHCHHHHH
Confidence 456777889999999999999999999975
No 9
>d2bpta1 a.118.1.1 (A:1-861) Importin beta {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=43.94 E-value=37 Score=23.09 Aligned_cols=60 Identities=13% Similarity=0.157 Sum_probs=44.9
Q ss_pred HHHHhcCCCchhhHHHHHHHHHHhhhCchh-------hhhhhh-hcccCCCHHHHHHHHHHHHHHHhh
Q psy12540 11 AFLKRKRKSKLIGGPVQAYLSDIGKRHPQA-------LVYPLT-VASKSNSSSRRNAANKILQSMCDL 70 (79)
Q Consensus 11 ~iaRi~s~~~~vr~li~~LL~~IGk~HPQA-------LvYPLt-VA~KS~s~~R~~aA~~Il~~mr~h 70 (79)
++.-+..+++.++....+.|..+.+.+|.. ++.+++ ...++....-+..|..++..+.+.
T Consensus 229 l~~~~~~~~~~~~~~~~~~l~~i~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~v~~~~~~~l~~l~~~ 296 (861)
T d2bpta1 229 VCEATQAEDIEVQAAAFGCLCKIMSKYYTFMKPYMEQALYALTIATMKSPNDKVASMTVEFWSTICEE 296 (861)
T ss_dssp HHHHHTCSCHHHHHHHHHHHHHHHHHHGGGCHHHHHHTHHHHHHHHTTCSSHHHHHHHHHHHHHHHHH
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHH
Confidence 445678889999999999999999998864 345554 456777777777777777666543
No 10
>d2g7sa2 a.121.1.1 (A:77-192) Putative transcriptional regulator Atu0279 {Agrobacterium tumefaciens [TaxId: 358]}
Probab=43.12 E-value=16 Score=20.29 Aligned_cols=32 Identities=9% Similarity=0.157 Sum_probs=25.8
Q ss_pred hhHHHHHHHHHHHhcCCCchhhHHHHHHHHHH
Q psy12540 2 LFSALVALCAFLKRKRKSKLIGGPVQAYLSDI 33 (79)
Q Consensus 2 ~~~~~~~~~~iaRi~s~~~~vr~li~~LL~~I 33 (79)
+++.+-+..+.+|+.......++++..++..+
T Consensus 83 l~~~~~G~~~~ar~~~d~~~~~~~~~~~~~~L 114 (116)
T d2g7sa2 83 FMATVHGAMLSARAHGDAATFGAITRPMLERI 114 (116)
T ss_dssp HHHHHHHHHHHHHSSCCTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHh
Confidence 57778888899999988887888887777665
No 11
>d2vglb_ a.118.1.10 (B:) Adaptin beta subunit N-terminal fragment {Human (Homo sapiens) [TaxId: 9606]}
Probab=40.53 E-value=16 Score=26.00 Aligned_cols=25 Identities=20% Similarity=0.282 Sum_probs=11.3
Q ss_pred cCCCchhhHHHHHHHHHHhhhCchh
Q psy12540 16 KRKSKLIGGPVQAYLSDIGKRHPQA 40 (79)
Q Consensus 16 ~s~~~~vr~li~~LL~~IGk~HPQA 40 (79)
.+++-.++++.+--|...++.+|.-
T Consensus 56 ~s~d~~~Kkl~yl~l~~~~~~~~d~ 80 (579)
T d2vglb_ 56 QTDNLELKKLVYLYLMNYAKSQPDM 80 (579)
T ss_dssp SSSCHHHHHHHHHHHHHHHHHSHHH
T ss_pred CCCCHHHHHHHHHHHHHhCcCCccH
Confidence 3444444444444444444444443
No 12
>d1ibrb_ a.118.1.1 (B:) Importin beta {Human (Homo sapiens) [TaxId: 9606]}
Probab=39.90 E-value=39 Score=21.06 Aligned_cols=61 Identities=13% Similarity=0.053 Sum_probs=43.9
Q ss_pred HHHHHhcCCCchhhHHHHHHHHHHhhhCchhh-------hhh-hhhcccCCCHHHHHHHHHHHHHHHhh
Q psy12540 10 CAFLKRKRKSKLIGGPVQAYLSDIGKRHPQAL-------VYP-LTVASKSNSSSRRNAANKILQSMCDL 70 (79)
Q Consensus 10 ~~iaRi~s~~~~vr~li~~LL~~IGk~HPQAL-------vYP-LtVA~KS~s~~R~~aA~~Il~~mr~h 70 (79)
.+...+.++++.++....+.|..+.+.+|..+ +.+ +..+.+++....+..|-..+..+.+.
T Consensus 220 ~l~~~~~~~~~~~~~~~~~~l~~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~a~~~l~~i~~~ 288 (458)
T d1ibrb_ 220 VVCEATQCPDTRVRVAALQNLVKIMSLYYQYMETYMGPALFAITIEAMKSDIDEVALQGIEFWSNVCDE 288 (458)
T ss_dssp HHHHHTTCSSHHHHHHHHHHHHHHHHHCGGGCTTTTTTTHHHHHHHHHHCSSHHHHHHHHHHHHHHHHH
T ss_pred hHHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHH
Confidence 34556788899999999999999999887543 233 34556777776666666666666543
No 13
>d2f4mb1 a.189.1.1 (B:275-332) XPC-binding domain of Rad23 homolog B (Hhr23b) {Human (Homo sapiens) [TaxId: 9606]}
Probab=39.15 E-value=6.7 Score=21.56 Aligned_cols=18 Identities=39% Similarity=0.652 Sum_probs=13.6
Q ss_pred HHHHHHHHHHhhhCchhh
Q psy12540 24 GPVQAYLSDIGKRHPQAL 41 (79)
Q Consensus 24 ~li~~LL~~IGk~HPQAL 41 (79)
+++..+|-.||+.+|+-+
T Consensus 23 ~~L~~lLqql~~~NP~L~ 40 (58)
T d2f4mb1 23 SLLPALLQQIGRENPQLL 40 (58)
T ss_dssp GGHHHHHHHHHHHCHHHH
T ss_pred HHHHHHHHHHHhhCHHHH
Confidence 356778888999888853
No 14
>d2vglb_ a.118.1.10 (B:) Adaptin beta subunit N-terminal fragment {Human (Homo sapiens) [TaxId: 9606]}
Probab=38.70 E-value=27 Score=24.69 Aligned_cols=64 Identities=17% Similarity=0.152 Sum_probs=45.9
Q ss_pred HhcCCCchhhHHHHHHHHHHhhhCc-hhhhhhhhhcccCCCHHHHHHHHHHHHHHHhhCHhhhhc
Q psy12540 14 KRKRKSKLIGGPVQAYLSDIGKRHP-QALVYPLTVASKSNSSSRRNAANKILQSMCDLSPLLVKL 77 (79)
Q Consensus 14 Ri~s~~~~vr~li~~LL~~IGk~HP-QALvYPLtVA~KS~s~~R~~aA~~Il~~mr~hsp~LV~q 77 (79)
=+.+|++.+|.+-.+.|..|+..-- +.++-++.=+.+++++.=|+.|-.-+.++-..+|+++++
T Consensus 91 Dl~d~n~~iR~lALr~L~~i~~~~i~~~l~~~l~~~L~D~~p~VRk~Aa~~l~kl~~~~p~~~~~ 155 (579)
T d2vglb_ 91 DCEDPNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQMVED 155 (579)
T ss_dssp GSSSSSHHHHHHHHHHHHTCCSGGGHHHHHHHHHHHSSCSCHHHHHHHHHHHHHHHHSSCCCHHH
T ss_pred HcCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHhccChhhhhh
Confidence 3678899999999888888764322 456777777777777754445555667788888988764
No 15
>d1qgra_ a.118.1.1 (A:) Importin beta {Human (Homo sapiens) [TaxId: 9606]}
Probab=33.52 E-value=67 Score=21.93 Aligned_cols=62 Identities=13% Similarity=0.041 Sum_probs=42.1
Q ss_pred HHHHhcCCCchhhHHHHHHHHHHhhhCchhh-------hhh-hhhcccCCCHHHHHHHHHHHHHHHhhCH
Q psy12540 11 AFLKRKRKSKLIGGPVQAYLSDIGKRHPQAL-------VYP-LTVASKSNSSSRRNAANKILQSMCDLSP 72 (79)
Q Consensus 11 ~iaRi~s~~~~vr~li~~LL~~IGk~HPQAL-------vYP-LtVA~KS~s~~R~~aA~~Il~~mr~hsp 72 (79)
+...+..+++.++....+.|.++.+.+|.-+ +.+ +..+.+++...-+..|...+..+.+...
T Consensus 222 l~~~~~~~~~~v~~~~~~~l~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 291 (876)
T d1qgra_ 222 VCEATQCPDTRVRVAALQNLVKIMSLYYQYMETYMGPALFAITIEAMKSDIDEVALQGIEFWSNVCDEEM 291 (876)
T ss_dssp HHHHTTCSSHHHHHHHHHHHHHHHHHSGGGCHHHHTTTHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHH
Confidence 4455678899999999999999999988642 233 3445667766656666555555554433
No 16
>d1dvpa1 a.118.9.2 (A:1-145) Hrs {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=31.71 E-value=25 Score=21.13 Aligned_cols=42 Identities=17% Similarity=0.332 Sum_probs=30.3
Q ss_pred HHHHHHHHHHhcCCCchhhHHHHHHHHHHhhhCchhhhhhhhhc
Q psy12540 5 ALVALCAFLKRKRKSKLIGGPVQAYLSDIGKRHPQALVYPLTVA 48 (79)
Q Consensus 5 ~~~~~~~iaRi~s~~~~vr~li~~LL~~IGk~HPQALvYPLtVA 48 (79)
+...+|=+.+ +.....+..+.-|--++...+|+.-+|.|++-
T Consensus 25 ~il~icD~I~--~~~~~~k~a~ral~krl~~~n~~v~l~aL~LL 66 (145)
T d1dvpa1 25 SILLICDEIN--QKDVTPKNAFAAIKKKMNSPNPHSSCYSLLVL 66 (145)
T ss_dssp HHHHHHHHHH--TTSSCHHHHHHHHHHHHTCSSHHHHHHHHHHH
T ss_pred HHHHHHHHHh--CCCccHHHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 4445555555 33445778888888888888999999998874
No 17
>d1te4a_ a.118.1.16 (A:) MTH187 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=30.91 E-value=37 Score=18.15 Aligned_cols=50 Identities=12% Similarity=0.124 Sum_probs=31.0
Q ss_pred HHHHhcCCCchhhHHHHHHHHHHhhhCchhhhhhhhhcccCCCHHHHHHHHHH
Q psy12540 11 AFLKRKRKSKLIGGPVQAYLSDIGKRHPQALVYPLTVASKSNSSSRRNAANKI 63 (79)
Q Consensus 11 ~iaRi~s~~~~vr~li~~LL~~IGk~HPQALvYPLtVA~KS~s~~R~~aA~~I 63 (79)
++..++.+++.||.-...-|..+|. +..+=.|.-..++++..=|++|...
T Consensus 58 L~~~l~d~~~~VR~~a~~aL~~i~~---~~~~~~L~~ll~d~~~~vr~~A~~a 107 (111)
T d1te4a_ 58 LIKLLEDDSGFVRSGAARSLEQIGG---ERVRAAMEKLAETGTGFARKVAVNY 107 (111)
T ss_dssp HHHHHHHCCTHHHHHHHHHHHHHCS---HHHHHHHHHHTTSCCTHHHHHHHHH
T ss_pred HHhhhccchhHHHHHHHHHHHHhCc---cchHHHHHHHHcCCCHHHHHHHHHH
Confidence 5566788899999998888888874 3333334444555555444444433
No 18
>d1kfia3 c.84.1.1 (A:324-443) Exocytosis-sensitive phosphoprotein, pp63/parafusin {Paramecium tetraurelia [TaxId: 5888]}
Probab=29.14 E-value=25 Score=20.65 Aligned_cols=35 Identities=9% Similarity=0.218 Sum_probs=23.1
Q ss_pred hhHHHHHHHHHHHhcCCCchhhHHHHHHHHHHhhhC
Q psy12540 2 LFSALVALCAFLKRKRKSKLIGGPVQAYLSDIGKRH 37 (79)
Q Consensus 2 ~~~~~~~~~~iaRi~s~~~~vr~li~~LL~~IGk~H 37 (79)
+++++..+++++....+-..... +.|++.++.++|
T Consensus 85 i~aal~~leila~~~k~~s~~~s-~~di~~~~~~~y 119 (120)
T d1kfia3 85 IWAVLAWLTILAHKNKNTDHFVT-VEEIVTQYWQQF 119 (120)
T ss_dssp HHHHHHHHHHHHHHTSSCSSCCC-HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCcChhhcCC-HHHHHHHHHHhc
Confidence 46788889999988765433322 566666666654
No 19
>d1j2jb_ a.7.8.1 (B:) ADP-ribosylation factor binding protein Gga1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=25.80 E-value=32 Score=17.62 Aligned_cols=21 Identities=33% Similarity=0.425 Sum_probs=17.7
Q ss_pred ccCCCHHHHHHHHHHHHHHHh
Q psy12540 49 SKSNSSSRRNAANKILQSMCD 69 (79)
Q Consensus 49 ~KS~s~~R~~aA~~Il~~mr~ 69 (79)
.||..+.=-++|++++.+|-+
T Consensus 15 LkS~~PeDLqaANrLIK~mVk 35 (41)
T d1j2jb_ 15 LKSSHPEDLRAANKLIKEMVQ 35 (41)
T ss_dssp HTCSCHHHHHHHHHHHHHHHH
T ss_pred HhcCCHHHHHHHHHHHHHHHH
Confidence 478888889999999998854
No 20
>d1w5fa1 c.32.1.1 (A:22-215) Cell-division protein FtsZ {Thermotoga maritima [TaxId: 2336]}
Probab=24.42 E-value=13 Score=24.01 Aligned_cols=46 Identities=17% Similarity=0.131 Sum_probs=32.0
Q ss_pred HHHHHhhhCchhhhhh-hhhcccCCCHHHHHHHHHHHHHHHhhCHhhh
Q psy12540 29 YLSDIGKRHPQALVYP-LTVASKSNSSSRRNAANKILQSMCDLSPLLV 75 (79)
Q Consensus 29 LL~~IGk~HPQALvYP-LtVA~KS~s~~R~~aA~~Il~~mr~hsp~LV 75 (79)
++.++.|+.- ++++. .|..++.+...|.+.|..=+++++++...++
T Consensus 105 viA~~ake~g-~lvv~ivtlPF~~EG~~r~~~A~~gl~~L~~~~D~~I 151 (194)
T d1w5fa1 105 VIAKIAKEMG-ILTVAIVTTPFYFEGPERLKKAIEGLKKLRKHVDTLI 151 (194)
T ss_dssp HHHHHHHHTT-CEEEEEEEECCGGGCHHHHHHHHHHHHHHHHTCSEEE
T ss_pred HHHHHHHHcC-CceEEEEeechhhhHHHHHHHHHHHHHHHHHHhhhhh
Confidence 3445555542 34443 2555777888999999999999999876554
No 21
>d1di2a_ d.50.1.1 (A:) Double-stranded RNA-binding protein A, second dsRBD {Xenopus laevis [TaxId: 8355]}
Probab=22.92 E-value=20 Score=18.93 Aligned_cols=19 Identities=32% Similarity=0.408 Sum_probs=15.5
Q ss_pred cCCCHHHHHHHHHHHHHHH
Q psy12540 50 KSNSSSRRNAANKILQSMC 68 (79)
Q Consensus 50 KS~s~~R~~aA~~Il~~mr 68 (79)
+|.....+.||...|++++
T Consensus 50 ~sKK~Aeq~AA~~aL~~L~ 68 (69)
T d1di2a_ 50 TSKQVAKRVAAEKLLTKFK 68 (69)
T ss_dssp SSHHHHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHHhc
Confidence 4556688999999999986
No 22
>d1rq2a1 c.32.1.1 (A:8-205) Cell-division protein FtsZ {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=22.51 E-value=16 Score=23.69 Aligned_cols=30 Identities=17% Similarity=0.161 Sum_probs=24.5
Q ss_pred hhcccCCCHHHHHHHHHHHHHHHhhCHhhh
Q psy12540 46 TVASKSNSSSRRNAANKILQSMCDLSPLLV 75 (79)
Q Consensus 46 tVA~KS~s~~R~~aA~~Il~~mr~hsp~LV 75 (79)
|...+.+...|.+.|+.=+++|+++...++
T Consensus 123 t~PF~~EG~~r~~~A~~gl~~L~~~~D~~I 152 (198)
T d1rq2a1 123 TRPFSFEGKRRSNQAENGIAALRESCDTLI 152 (198)
T ss_dssp EECCGGGCHHHHHHHHHHHHHHHHHCSEEE
T ss_pred ecChHHHHHHHHHHHHHHHHHHHHhhCeEE
Confidence 445777888999999999999999876543
No 23
>d1juqa_ a.118.9.2 (A:) ADP-ribosylation factor binding protein Gga3 {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.93 E-value=40 Score=20.44 Aligned_cols=41 Identities=15% Similarity=0.183 Sum_probs=29.0
Q ss_pred HHHHHHHHHhcCCCchhhHHHHHHHHHHhhhCchhhhhhhhhc
Q psy12540 6 LVALCAFLKRKRKSKLIGGPVQAYLSDIGKRHPQALVYPLTVA 48 (79)
Q Consensus 6 ~~~~~~iaRi~s~~~~vr~li~~LL~~IGk~HPQALvYPLtVA 48 (79)
..-+|=+.+ +.....+..+.-|-.++....|+..+|.|++.
T Consensus 23 ileicD~In--~~~~~~k~a~rai~krl~~~~~~~~l~aL~LL 63 (151)
T d1juqa_ 23 IIGFCDQIN--KELEGPQIAVRLLAHKIQSPQEWEALQALTVL 63 (151)
T ss_dssp HHHHHHHHH--HSTTHHHHHHHHHHHHHTCSSHHHHHHHHHHH
T ss_pred HHHHHHHHh--cCCccHHHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 344444444 33345788888888888888899888888875
No 24
>d2dixa1 d.50.1.1 (A:7-79) Interferon-inducible double stranded RNA-dependent protein kinase activator A {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.74 E-value=47 Score=17.44 Aligned_cols=23 Identities=13% Similarity=0.150 Sum_probs=19.0
Q ss_pred ccCCCHHHHHHHHHHHHHHHhhC
Q psy12540 49 SKSNSSSRRNAANKILQSMCDLS 71 (79)
Q Consensus 49 ~KS~s~~R~~aA~~Il~~mr~hs 71 (79)
.+|.....+.||...|+.|+..+
T Consensus 50 g~sKK~Aeq~AA~~al~~L~~~~ 72 (73)
T d2dixa1 50 GTSKKLAKHRAAEAAINILKANA 72 (73)
T ss_dssp SSCTTHHHHHHHHHHHHHHHHTC
T ss_pred cccHHHHHHHHHHHHHHHHHhcC
Confidence 46677889999999999998654
No 25
>d1n5ua1 a.126.1.1 (A:2-196) Serum albumin {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.49 E-value=25 Score=22.28 Aligned_cols=19 Identities=32% Similarity=0.502 Sum_probs=16.0
Q ss_pred hhHHHHHHHHHHhhhCchh
Q psy12540 22 IGGPVQAYLSDIGKRHPQA 40 (79)
Q Consensus 22 vr~li~~LL~~IGk~HPQA 40 (79)
-...+...|-+++|.||+.
T Consensus 130 ~~~~~~~fLye~srrhP~~ 148 (195)
T d1n5ua1 130 EETFLKKYLYEIARRHPYF 148 (195)
T ss_dssp HHHHHHHHHHHHHHHSTTS
T ss_pred HHHHHHHHHHHHHhhCCCC
Confidence 3456889999999999986
No 26
>d1ofua1 c.32.1.1 (A:11-208) Cell-division protein FtsZ {Pseudomonas aeruginosa [TaxId: 287]}
Probab=21.45 E-value=16 Score=23.69 Aligned_cols=46 Identities=13% Similarity=0.198 Sum_probs=31.7
Q ss_pred HHHHHhhhCchhhhhhh-hhcccCCCHHHHHHHHHHHHHHHhhCHhhh
Q psy12540 29 YLSDIGKRHPQALVYPL-TVASKSNSSSRRNAANKILQSMCDLSPLLV 75 (79)
Q Consensus 29 LL~~IGk~HPQALvYPL-tVA~KS~s~~R~~aA~~Il~~mr~hsp~LV 75 (79)
++.++.|+-- ++++.+ |...+.+...|.+.|..=+++|+++...++
T Consensus 106 viA~~ake~g-~lvvaivtlPF~~EG~~r~~~A~~gl~~L~~~~d~~i 152 (198)
T d1ofua1 106 IIAEVAKEMG-ILTVAVVTRPFPFEGRKRMQIADEGIRALAESVDSLI 152 (198)
T ss_dssp HHHHHHHHTT-CEEEEEEEECCGGGCHHHHHHHHHHHHHHHTTCSEEE
T ss_pred HHHHHHHHcC-CCEEEEEecchHHHHHHHHHHHHHHHHHHHHHCCEEE
Confidence 3445555542 344432 455788989999999999999999876543
No 27
>d2oc6a1 d.198.4.1 (A:1-123) Uncharacterized protein YdhG {Bacillus subtilis [TaxId: 1423]}
Probab=21.29 E-value=32 Score=19.99 Aligned_cols=23 Identities=17% Similarity=0.209 Sum_probs=14.0
Q ss_pred HHHHHHHHHHHHHHHhhCHhhhh
Q psy12540 54 SSRRNAANKILQSMCDLSPLLVK 76 (79)
Q Consensus 54 ~~R~~aA~~Il~~mr~hsp~LV~ 76 (79)
+.||+....|.+-+++..|++.+
T Consensus 14 p~~r~~l~~l~~~I~~~~P~~ee 36 (123)
T d2oc6a1 14 PFHRERTEEVLTWIKNKYPNLHT 36 (123)
T ss_dssp HHHHHHHHHHHHHHHHHSTTSEE
T ss_pred HHHHHHHHHHHHHHHHHhhcccc
Confidence 34566666666666666666543
No 28
>d1ixca2 c.94.1.1 (A:90-294) LysR-type regulatory protein CbnR {Ralstonia eutropha [TaxId: 106590]}
Probab=20.93 E-value=22 Score=19.59 Aligned_cols=27 Identities=15% Similarity=0.006 Sum_probs=21.6
Q ss_pred HhcCCCchhhHHHHHHHHHHhhhCchh
Q psy12540 14 KRKRKSKLIGGPVQAYLSDIGKRHPQA 40 (79)
Q Consensus 14 Ri~s~~~~vr~li~~LL~~IGk~HPQA 40 (79)
||..........+-.+|.+.-+.||+.
T Consensus 5 rIg~~~~~~~~~Lp~~l~~f~~~~P~v 31 (205)
T d1ixca2 5 SVAYFGTPIYRSLPLLLRAFLTSTPTA 31 (205)
T ss_dssp EEEECSGGGGTHHHHHHHHHHHHCTTE
T ss_pred EEEEEhHHHHHHHHHHHHHHHHHCCCc
Confidence 556666667778889999999999986
No 29
>d1x48a1 d.50.1.1 (A:8-83) dsRNA-dependent protein kinase pkr {Mouse (Mus musculus) [TaxId: 10090]}
Probab=20.88 E-value=23 Score=19.29 Aligned_cols=24 Identities=17% Similarity=0.248 Sum_probs=19.8
Q ss_pred cCCCHHHHHHHHHHHHHHHhhCHh
Q psy12540 50 KSNSSSRRNAANKILQSMCDLSPL 73 (79)
Q Consensus 50 KS~s~~R~~aA~~Il~~mr~hsp~ 73 (79)
+|.....+.||...|+.|....|.
T Consensus 48 ~sKK~Aeq~AA~~Al~~L~~~~~~ 71 (76)
T d1x48a1 48 VTKQEAKQLAAKEAYQKLLKSPPK 71 (76)
T ss_dssp SSHHHHHHHHHHHHHHHHHHSCCC
T ss_pred cHHHHHHHHHHHHHHHHHHccCCC
Confidence 556678899999999999987763
No 30
>d2b7ta1 d.50.1.1 (A:1-73) dsRNA-specific editase 1 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=20.50 E-value=26 Score=18.85 Aligned_cols=20 Identities=25% Similarity=0.385 Sum_probs=16.0
Q ss_pred cCCCHHHHHHHHHHHHHHHh
Q psy12540 50 KSNSSSRRNAANKILQSMCD 69 (79)
Q Consensus 50 KS~s~~R~~aA~~Il~~mr~ 69 (79)
+|....++.||...|+.+.+
T Consensus 52 ~SKK~Aeq~AA~~aL~~l~~ 71 (73)
T d2b7ta1 52 PTKKKAKLHAAEKALRSFVQ 71 (73)
T ss_dssp SSHHHHHHHHHHHHHHHHHT
T ss_pred CcHHHHHHHHHHHHHHHHhh
Confidence 45556899999999998854
Done!