BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy12549
(336 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|157125851|ref|XP_001654419.1| polyadenylate-binding protein [Aedes aegypti]
gi|157125853|ref|XP_001654420.1| polyadenylate-binding protein [Aedes aegypti]
gi|94468824|gb|ABF18261.1| polyadenylate-binding protein [Aedes aegypti]
gi|108873484|gb|EAT37709.1| AAEL010318-PB [Aedes aegypti]
gi|108873485|gb|EAT37710.1| AAEL010318-PA [Aedes aegypti]
Length = 628
Score = 468 bits (1204), Expect = e-129, Method: Compositional matrix adjust.
Identities = 229/275 (83%), Positives = 246/275 (89%), Gaps = 3/275 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD +KGRPIRIMWSQRDPSLRKSGVGNVFIKNLDK+I
Sbjct: 44 GYAYVNFQQP--ADAERALDTMNFDLIKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKNI 101
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKAMYDTFSAFG+ILSCKVAQDE+GNSKGYGFVHFETEE+AN SIEKVNGMLLN K V+
Sbjct: 102 DNKAMYDTFSAFGNILSCKVAQDEKGNSKGYGFVHFETEESANTSIEKVNGMLLNGKKVY 161
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDGKS 242
VG+FIPRKEREKELGEKAKLFTNVY+KNFG++ NDE LKEMFE YGTITS+RVM DGKS
Sbjct: 162 VGRFIPRKEREKELGEKAKLFTNVYVKNFGDELNDETLKEMFEKYGTITSHRVMIKDGKS 221
Query: 243 RGFGFVAYESPEFAEKAVQAWNGKEV-DGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
RGFGFVA+E+PE AE AVQ NGKE+ +GKILYVGRAQKK ER ELKRRFE LK+ERL
Sbjct: 222 RGFGFVAFENPESAEHAVQELNGKELGEGKILYVGRAQKKNERQMELKRRFEQLKMERLT 281
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLYVKNLDDSIDDERLRKEF+PFGTITSAK
Sbjct: 282 RYQGVNLYVKNLDDSIDDERLRKEFSPFGTITSAK 316
Score = 130 bits (327), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 70/192 (36%), Positives = 116/192 (60%), Gaps = 12/192 (6%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV++KN ++++ + + F +G+I S +V + G S+G+GFV FE E+A +++++
Sbjct: 184 NVYVKNFGDELNDETLKEMFEKYGTITSHRVMIKD-GKSRGFGFVAFENPESAEHAVQEL 242
Query: 172 NGMLLN-SKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKL 220
NG L KI++VG+ + ER+ EL + + N+Y+KN + +DE+L
Sbjct: 243 NGKELGEGKILYVGRAQKKNERQMELKRRFEQLKMERLTRYQGVNLYVKNLDDSIDDERL 302
Query: 221 KEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
++ F P+GTITS +VM +G+S+GFGFV + + E A KAV NG+ V K LYV AQ+
Sbjct: 303 RKEFSPFGTITSAKVMLEEGRSKGFGFVCFSAAEEATKAVTEMNGRIVGSKPLYVALAQR 362
Query: 281 KAERTQELKRRF 292
K +R L ++
Sbjct: 363 KEDRKAHLASQY 374
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 127/229 (55%), Gaps = 18/229 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQD-EQGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L I +++ FS+ G +LS +V +D S GY +V+F+ A +++
Sbjct: 1 MASLYVGDLHADITEAILFEKFSSAGPVLSIRVCRDVVTRRSLGYAYVNFQQPADAERAL 60
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N L+ + + I +R+ L + NV+IKN ++ +++ + + F +G
Sbjct: 61 DTMNFDLIKGRPI----RIMWSQRDPSLRKSG--VGNVFIKNLDKNIDNKAMYDTFSAFG 114
Query: 229 TITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQE 287
I S +V ++ G S+G+GFV +E+ E A +++ NG ++GK +YVGR + ER +E
Sbjct: 115 NILSCKVAQDEKGNSKGYGFVHFETEESANTSIEKVNGMLLNGKKVYVGRFIPRKEREKE 174
Query: 288 LKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
L + ++ N+YVKN D ++DE L++ F +GTITS +
Sbjct: 175 LGEKAKLF----------TNVYVKNFGDELNDETLKEMFEKYGTITSHR 213
>gi|91095037|ref|XP_975975.1| PREDICTED: similar to poly A binding protein isoform 4 [Tribolium
castaneum]
gi|270014772|gb|EFA11220.1| hypothetical protein TcasGA2_TC005185 [Tribolium castaneum]
Length = 607
Score = 468 bits (1204), Expect = e-129, Method: Compositional matrix adjust.
Identities = 228/276 (82%), Positives = 248/276 (89%), Gaps = 4/276 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD +KGRPIRIMWSQRDPSLRKSGVGNVFIKNLD+SI
Sbjct: 53 GYAYVNFQQP--ADAERALDTMNFDLIKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDRSI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKAMYDTFSAFG+ILSCKVAQDE G SKGYGFVHFETEEAANKSIEKVNGMLLN K V+
Sbjct: 111 DNKAMYDTFSAFGNILSCKVAQDENGTSKGYGFVHFETEEAANKSIEKVNGMLLNGKKVY 170
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMN-NDGK 241
VG+FIPRKEREKELGEKAKLFTNVY+KNFGED +E+L+ MFE YG ITSY++M+ +DGK
Sbjct: 171 VGRFIPRKEREKELGEKAKLFTNVYVKNFGEDLTEEQLRTMFEKYGKITSYKIMSKDDGK 230
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKE-VDGKILYVGRAQKKAERTQELKRRFEMLKIERL 300
S+GFGFVA+ESPE AE AV+A NGKE +DGK LYVGRAQKKAER QELKRRFE LK+ERL
Sbjct: 231 SKGFGFVAFESPEAAETAVEALNGKEIIDGKPLYVGRAQKKAERQQELKRRFEALKMERL 290
Query: 301 NRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
NRYQGVNLYVKNLDD+IDDERLRKEF+PFGTITSAK
Sbjct: 291 NRYQGVNLYVKNLDDTIDDERLRKEFSPFGTITSAK 326
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 75/204 (36%), Positives = 121/204 (59%), Gaps = 12/204 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV++KN + + + + F +G I S K+ + G SKG+GFV FE+ EAA ++E +
Sbjct: 193 NVYVKNFGEDLTEEQLRTMFEKYGKITSYKIMSKDDGKSKGFGFVAFESPEAAETAVEAL 252
Query: 172 NGM-LLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKL 220
NG +++ K ++VG+ + ER++EL + + N+Y+KN + +DE+L
Sbjct: 253 NGKEIIDGKPLYVGRAQKKAERQQELKRRFEALKMERLNRYQGVNLYVKNLDDTIDDERL 312
Query: 221 KEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
++ F P+GTITS +VM D +S+GFGFV + SPE A KAV NG+ V K LYV AQ+
Sbjct: 313 RKEFSPFGTITSAKVMMEDNRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQR 372
Query: 281 KAERTQELKRRFEMLKIERLNRYQ 304
K +R L ++ M ++ + +Q
Sbjct: 373 KEDRKAHLTSQY-MQRMANIRMHQ 395
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 125/237 (52%), Gaps = 18/237 (7%)
Query: 102 DPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFET 160
+P + ++++ +L I +++ FS G +LS +V +D S GY +V+F+
Sbjct: 2 NPGAPNYPMASLYVGDLHTDITEAMLFEKFSTAGPVLSIRVCRDLITRRSLGYAYVNFQQ 61
Query: 161 EEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKL 220
A ++++ +N L+ + + I +R+ L + NV+IKN +++ +
Sbjct: 62 PADAERALDTMNFDLIKGRPI----RIMWSQRDPSLRKSG--VGNVFIKNLDRSIDNKAM 115
Query: 221 KEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQ 279
+ F +G I S +V ++ G S+G+GFV +E+ E A K+++ NG ++GK +YVGR
Sbjct: 116 YDTFSAFGNILSCKVAQDENGTSKGYGFVHFETEEAANKSIEKVNGMLLNGKKVYVGRFI 175
Query: 280 KKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ ER +EL + ++ N+YVKN + + +E+LR F +G ITS K
Sbjct: 176 PRKEREKELGEKAKLF----------TNVYVKNFGEDLTEEQLRTMFEKYGKITSYK 222
>gi|307165845|gb|EFN60208.1| Polyadenylate-binding protein 1 [Camponotus floridanus]
Length = 635
Score = 466 bits (1198), Expect = e-129, Method: Compositional matrix adjust.
Identities = 228/276 (82%), Positives = 248/276 (89%), Gaps = 4/276 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD +KGRPIRIMWSQRDPSLRKSGVGNVFIKNLDK+I
Sbjct: 53 GYAYVNFQQP--ADAERALDTMNFDMIKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKNI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKAMYDTFSAFG+ILSCKVAQDE G SKGYGFVHFETEEAANKSI+KVNGMLLN K V+
Sbjct: 111 DNKAMYDTFSAFGNILSCKVAQDESGASKGYGFVHFETEEAANKSIDKVNGMLLNGKKVY 170
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMN-NDGK 241
VGKFIPRKEREKELGEKAKLFTNVY+KNFGED D+KLKEMFE YGTITS++VM+ +DGK
Sbjct: 171 VGKFIPRKEREKELGEKAKLFTNVYVKNFGEDMTDDKLKEMFEKYGTITSHKVMSKDDGK 230
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEV-DGKILYVGRAQKKAERTQELKRRFEMLKIERL 300
SRGFGFVA+E P+ AE+AV NGK++ +GK +YVGRAQKKAER QELKR+FE LKIERL
Sbjct: 231 SRGFGFVAFEDPDAAEQAVLELNGKDISEGKCMYVGRAQKKAERQQELKRKFEQLKIERL 290
Query: 301 NRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
NRYQGVNLYVKNLDD+IDDERLRKEFTPFGTITSAK
Sbjct: 291 NRYQGVNLYVKNLDDTIDDERLRKEFTPFGTITSAK 326
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 71/192 (36%), Positives = 115/192 (59%), Gaps = 11/192 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV++KN + + + + + F +G+I S KV + G S+G+GFV FE +AA +++ ++
Sbjct: 193 NVYVKNFGEDMTDDKLKEMFEKYGTITSHKVMSKDDGKSRGFGFVAFEDPDAAEQAVLEL 252
Query: 172 NGM-LLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKL 220
NG + K ++VG+ + ER++EL K + N+Y+KN + +DE+L
Sbjct: 253 NGKDISEGKCMYVGRAQKKAERQQELKRKFEQLKIERLNRYQGVNLYVKNLDDTIDDERL 312
Query: 221 KEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
++ F P+GTITS +VM +G+S+GFGFV + PE A KAV NG+ V K LYV AQ+
Sbjct: 313 RKEFTPFGTITSAKVMMEEGRSKGFGFVCFSQPEEATKAVTEMNGRIVGSKPLYVALAQR 372
Query: 281 KAERTQELKRRF 292
K +R L ++
Sbjct: 373 KEDRKAHLASQY 384
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 129/237 (54%), Gaps = 18/237 (7%)
Query: 102 DPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFET 160
+P + ++++ +L I +++ FS+ G +LS +V +D S GY +V+F+
Sbjct: 2 NPGAPNYPMASLYVGDLHTDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 161 EEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKL 220
A ++++ +N ++ + + I +R+ L + NV+IKN ++ +++ +
Sbjct: 62 PADAERALDTMNFDMIKGRPI----RIMWSQRDPSLRKSG--VGNVFIKNLDKNIDNKAM 115
Query: 221 KEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQ 279
+ F +G I S +V ++ G S+G+GFV +E+ E A K++ NG ++GK +YVG+
Sbjct: 116 YDTFSAFGNILSCKVAQDESGASKGYGFVHFETEEAANKSIDKVNGMLLNGKKVYVGKFI 175
Query: 280 KKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ ER +EL + ++ N+YVKN + + D++L++ F +GTITS K
Sbjct: 176 PRKEREKELGEKAKLF----------TNVYVKNFGEDMTDDKLKEMFEKYGTITSHK 222
>gi|340719918|ref|XP_003398391.1| PREDICTED: polyadenylate-binding protein 1-like isoform 1 [Bombus
terrestris]
Length = 630
Score = 465 bits (1196), Expect = e-128, Method: Compositional matrix adjust.
Identities = 228/276 (82%), Positives = 246/276 (89%), Gaps = 4/276 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD +KGRPIRIMWSQRDPSLRKSGVGNVFIKNLDK+I
Sbjct: 53 GYAYVNFQQP--ADAERALDTMNFDMIKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKNI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKAMYDTFSAFG+ILSCKVAQDE G SKGYGFVHFETEEAANKSI++VNGMLLN K V+
Sbjct: 111 DNKAMYDTFSAFGNILSCKVAQDESGVSKGYGFVHFETEEAANKSIDRVNGMLLNGKKVY 170
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGK 241
VGKFIPRKEREKELGEKAKLFTNVY+KNFGED D+KLKEMFE YGTITS++VM +DGK
Sbjct: 171 VGKFIPRKEREKELGEKAKLFTNVYVKNFGEDMTDDKLKEMFEKYGTITSHKVMIKDDGK 230
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEV-DGKILYVGRAQKKAERTQELKRRFEMLKIERL 300
SRGFGFVA+E P+ AE+AV NGKEV +GK +YVGRAQKKAER QELKR+FE LK+ERL
Sbjct: 231 SRGFGFVAFEDPDAAEQAVLELNGKEVAEGKCMYVGRAQKKAERQQELKRKFEQLKLERL 290
Query: 301 NRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
NRYQGVNLYVKNLDDSIDDERLRKEF PFGTITSAK
Sbjct: 291 NRYQGVNLYVKNLDDSIDDERLRKEFAPFGTITSAK 326
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 70/192 (36%), Positives = 116/192 (60%), Gaps = 11/192 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV++KN + + + + + F +G+I S KV + G S+G+GFV FE +AA +++ ++
Sbjct: 193 NVYVKNFGEDMTDDKLKEMFEKYGTITSHKVMIKDDGKSRGFGFVAFEDPDAAEQAVLEL 252
Query: 172 NGM-LLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKL 220
NG + K ++VG+ + ER++EL K + N+Y+KN + +DE+L
Sbjct: 253 NGKEVAEGKCMYVGRAQKKAERQQELKRKFEQLKLERLNRYQGVNLYVKNLDDSIDDERL 312
Query: 221 KEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
++ F P+GTITS +VM +G+S+GFGFV + +PE A KAV NG+ + K LYV AQ+
Sbjct: 313 RKEFAPFGTITSAKVMMEEGRSKGFGFVCFSAPEEATKAVTEMNGRIIVTKPLYVALAQR 372
Query: 281 KAERTQELKRRF 292
K +R L ++
Sbjct: 373 KEDRKAHLASQY 384
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 129/237 (54%), Gaps = 18/237 (7%)
Query: 102 DPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFET 160
+P + ++++ +L I +++ FS+ G +LS +V +D S GY +V+F+
Sbjct: 2 NPGAPNYPMASLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 161 EEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKL 220
A ++++ +N ++ + + I +R+ L + NV+IKN ++ +++ +
Sbjct: 62 PADAERALDTMNFDMIKGRPI----RIMWSQRDPSLRKSG--VGNVFIKNLDKNIDNKAM 115
Query: 221 KEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQ 279
+ F +G I S +V ++ G S+G+GFV +E+ E A K++ NG ++GK +YVG+
Sbjct: 116 YDTFSAFGNILSCKVAQDESGVSKGYGFVHFETEEAANKSIDRVNGMLLNGKKVYVGKFI 175
Query: 280 KKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ ER +EL + ++ N+YVKN + + D++L++ F +GTITS K
Sbjct: 176 PRKEREKELGEKAKLF----------TNVYVKNFGEDMTDDKLKEMFEKYGTITSHK 222
>gi|380019828|ref|XP_003693803.1| PREDICTED: polyadenylate-binding protein 1-like [Apis florea]
Length = 630
Score = 464 bits (1195), Expect = e-128, Method: Compositional matrix adjust.
Identities = 228/276 (82%), Positives = 246/276 (89%), Gaps = 4/276 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD +KGRPIRIMWSQRDPSLRKSGVGNVFIKNLDK+I
Sbjct: 53 GYAYVNFQQP--ADAERALDTMNFDMIKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKNI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKAMYDTFSAFG+ILSCKVAQDE G SKGYGFVHFETEEAANKSI++VNGMLLN K V+
Sbjct: 111 DNKAMYDTFSAFGNILSCKVAQDESGVSKGYGFVHFETEEAANKSIDRVNGMLLNGKKVY 170
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGK 241
VGKFIPRKEREKELGEKAKLFTNVY+KNFGED D+KLKEMFE YGTITS++VM +DGK
Sbjct: 171 VGKFIPRKEREKELGEKAKLFTNVYVKNFGEDMTDDKLKEMFEKYGTITSHKVMIKDDGK 230
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEV-DGKILYVGRAQKKAERTQELKRRFEMLKIERL 300
SRGFGFVA+E P+ AE+AV NGKEV +GK +YVGRAQKKAER QELKR+FE LK+ERL
Sbjct: 231 SRGFGFVAFEDPDAAEQAVLELNGKEVAEGKCMYVGRAQKKAERQQELKRKFEQLKLERL 290
Query: 301 NRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
NRYQGVNLYVKNLDDSIDDERLRKEF PFGTITSAK
Sbjct: 291 NRYQGVNLYVKNLDDSIDDERLRKEFAPFGTITSAK 326
Score = 134 bits (337), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 70/192 (36%), Positives = 116/192 (60%), Gaps = 11/192 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV++KN + + + + + F +G+I S KV + G S+G+GFV FE +AA +++ ++
Sbjct: 193 NVYVKNFGEDMTDDKLKEMFEKYGTITSHKVMIKDDGKSRGFGFVAFEDPDAAEQAVLEL 252
Query: 172 NGM-LLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKL 220
NG + K ++VG+ + ER++EL K + N+Y+KN + +DE+L
Sbjct: 253 NGKEVAEGKCMYVGRAQKKAERQQELKRKFEQLKLERLNRYQGVNLYVKNLDDSIDDERL 312
Query: 221 KEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
++ F P+GTITS +VM +G+S+GFGFV + +PE A KAV NG+ + K LYV AQ+
Sbjct: 313 RKEFAPFGTITSAKVMMEEGRSKGFGFVCFSAPEEATKAVTEMNGRIIVTKPLYVALAQR 372
Query: 281 KAERTQELKRRF 292
K +R L ++
Sbjct: 373 KEDRKAHLASQY 384
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 129/237 (54%), Gaps = 18/237 (7%)
Query: 102 DPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFET 160
+P + ++++ +L I +++ FS+ G +LS +V +D S GY +V+F+
Sbjct: 2 NPGAPNYPMASLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 161 EEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKL 220
A ++++ +N ++ + + I +R+ L + NV+IKN ++ +++ +
Sbjct: 62 PADAERALDTMNFDMIKGRPI----RIMWSQRDPSLRKSG--VGNVFIKNLDKNIDNKAM 115
Query: 221 KEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQ 279
+ F +G I S +V ++ G S+G+GFV +E+ E A K++ NG ++GK +YVG+
Sbjct: 116 YDTFSAFGNILSCKVAQDESGVSKGYGFVHFETEEAANKSIDRVNGMLLNGKKVYVGKFI 175
Query: 280 KKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ ER +EL + ++ N+YVKN + + D++L++ F +GTITS K
Sbjct: 176 PRKEREKELGEKAKLF----------TNVYVKNFGEDMTDDKLKEMFEKYGTITSHK 222
>gi|340719922|ref|XP_003398393.1| PREDICTED: polyadenylate-binding protein 1-like isoform 3 [Bombus
terrestris]
Length = 621
Score = 464 bits (1194), Expect = e-128, Method: Compositional matrix adjust.
Identities = 228/276 (82%), Positives = 246/276 (89%), Gaps = 4/276 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD +KGRPIRIMWSQRDPSLRKSGVGNVFIKNLDK+I
Sbjct: 53 GYAYVNFQQP--ADAERALDTMNFDMIKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKNI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKAMYDTFSAFG+ILSCKVAQDE G SKGYGFVHFETEEAANKSI++VNGMLLN K V+
Sbjct: 111 DNKAMYDTFSAFGNILSCKVAQDESGVSKGYGFVHFETEEAANKSIDRVNGMLLNGKKVY 170
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGK 241
VGKFIPRKEREKELGEKAKLFTNVY+KNFGED D+KLKEMFE YGTITS++VM +DGK
Sbjct: 171 VGKFIPRKEREKELGEKAKLFTNVYVKNFGEDMTDDKLKEMFEKYGTITSHKVMIKDDGK 230
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEV-DGKILYVGRAQKKAERTQELKRRFEMLKIERL 300
SRGFGFVA+E P+ AE+AV NGKEV +GK +YVGRAQKKAER QELKR+FE LK+ERL
Sbjct: 231 SRGFGFVAFEDPDAAEQAVLELNGKEVAEGKCMYVGRAQKKAERQQELKRKFEQLKLERL 290
Query: 301 NRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
NRYQGVNLYVKNLDDSIDDERLRKEF PFGTITSAK
Sbjct: 291 NRYQGVNLYVKNLDDSIDDERLRKEFAPFGTITSAK 326
Score = 134 bits (337), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 70/192 (36%), Positives = 116/192 (60%), Gaps = 11/192 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV++KN + + + + + F +G+I S KV + G S+G+GFV FE +AA +++ ++
Sbjct: 193 NVYVKNFGEDMTDDKLKEMFEKYGTITSHKVMIKDDGKSRGFGFVAFEDPDAAEQAVLEL 252
Query: 172 NGM-LLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKL 220
NG + K ++VG+ + ER++EL K + N+Y+KN + +DE+L
Sbjct: 253 NGKEVAEGKCMYVGRAQKKAERQQELKRKFEQLKLERLNRYQGVNLYVKNLDDSIDDERL 312
Query: 221 KEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
++ F P+GTITS +VM +G+S+GFGFV + +PE A KAV NG+ + K LYV AQ+
Sbjct: 313 RKEFAPFGTITSAKVMMEEGRSKGFGFVCFSAPEEATKAVTEMNGRIIVTKPLYVALAQR 372
Query: 281 KAERTQELKRRF 292
K +R L ++
Sbjct: 373 KEDRKAHLASQY 384
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 129/237 (54%), Gaps = 18/237 (7%)
Query: 102 DPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFET 160
+P + ++++ +L I +++ FS+ G +LS +V +D S GY +V+F+
Sbjct: 2 NPGAPNYPMASLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 161 EEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKL 220
A ++++ +N ++ + + I +R+ L + NV+IKN ++ +++ +
Sbjct: 62 PADAERALDTMNFDMIKGRPI----RIMWSQRDPSLRKSG--VGNVFIKNLDKNIDNKAM 115
Query: 221 KEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQ 279
+ F +G I S +V ++ G S+G+GFV +E+ E A K++ NG ++GK +YVG+
Sbjct: 116 YDTFSAFGNILSCKVAQDESGVSKGYGFVHFETEEAANKSIDRVNGMLLNGKKVYVGKFI 175
Query: 280 KKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ ER +EL + ++ N+YVKN + + D++L++ F +GTITS K
Sbjct: 176 PRKEREKELGEKAKLF----------TNVYVKNFGEDMTDDKLKEMFEKYGTITSHK 222
>gi|332030568|gb|EGI70256.1| Polyadenylate-binding protein 1 [Acromyrmex echinatior]
Length = 678
Score = 464 bits (1193), Expect = e-128, Method: Compositional matrix adjust.
Identities = 226/275 (82%), Positives = 247/275 (89%), Gaps = 10/275 (3%)
Query: 72 PYMLD--------TERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSID 123
P MLD ERALDTMNFD +KGRPIRIMWSQRDPSLRKSGVGNVFIKNLDK+ID
Sbjct: 95 PTMLDPRPHSTVNAERALDTMNFDMIKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKNID 154
Query: 124 NKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFV 183
NKAMYDTFSAFG+ILSCKVAQDE G SKGYGFVHFETEEAANKSI+KVNGMLLN K V+V
Sbjct: 155 NKAMYDTFSAFGNILSCKVAQDESGASKGYGFVHFETEEAANKSIDKVNGMLLNGKKVYV 214
Query: 184 GKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMN-NDGKS 242
GKFIPRKEREKELGEKAKLFTNVY+KNFGED ++KLK+MFE YGTITS++VM+ +DGKS
Sbjct: 215 GKFIPRKEREKELGEKAKLFTNVYVKNFGEDMTEDKLKDMFEKYGTITSHKVMSKDDGKS 274
Query: 243 RGFGFVAYESPEFAEKAVQAWNGKEV-DGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
RGFGFVA+E P+ AE+AV NGKE+ +GK +YVGRAQKKAER QELKR+FE LKIERLN
Sbjct: 275 RGFGFVAFEDPDAAEQAVLELNGKEIAEGKCMYVGRAQKKAERQQELKRKFEQLKIERLN 334
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLYVKNLDD+IDDERLRKEFTPFGTITSAK
Sbjct: 335 RYQGVNLYVKNLDDTIDDERLRKEFTPFGTITSAK 369
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 72/192 (37%), Positives = 114/192 (59%), Gaps = 11/192 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV++KN + + + D F +G+I S KV + G S+G+GFV FE +AA +++ ++
Sbjct: 236 NVYVKNFGEDMTEDKLKDMFEKYGTITSHKVMSKDDGKSRGFGFVAFEDPDAAEQAVLEL 295
Query: 172 NGM-LLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKL 220
NG + K ++VG+ + ER++EL K + N+Y+KN + +DE+L
Sbjct: 296 NGKEIAEGKCMYVGRAQKKAERQQELKRKFEQLKIERLNRYQGVNLYVKNLDDTIDDERL 355
Query: 221 KEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
++ F P+GTITS +VM +G+S+GFGFV + PE A KAV NG+ V K LYV AQ+
Sbjct: 356 RKEFTPFGTITSAKVMMEEGRSKGFGFVCFSQPEEATKAVTEMNGRIVGSKPLYVALAQR 415
Query: 281 KAERTQELKRRF 292
K +R L ++
Sbjct: 416 KEDRKAHLASQY 427
>gi|340719924|ref|XP_003398394.1| PREDICTED: polyadenylate-binding protein 1-like isoform 4 [Bombus
terrestris]
Length = 612
Score = 464 bits (1193), Expect = e-128, Method: Compositional matrix adjust.
Identities = 228/276 (82%), Positives = 246/276 (89%), Gaps = 4/276 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD +KGRPIRIMWSQRDPSLRKSGVGNVFIKNLDK+I
Sbjct: 53 GYAYVNFQQP--ADAERALDTMNFDMIKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKNI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKAMYDTFSAFG+ILSCKVAQDE G SKGYGFVHFETEEAANKSI++VNGMLLN K V+
Sbjct: 111 DNKAMYDTFSAFGNILSCKVAQDESGVSKGYGFVHFETEEAANKSIDRVNGMLLNGKKVY 170
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGK 241
VGKFIPRKEREKELGEKAKLFTNVY+KNFGED D+KLKEMFE YGTITS++VM +DGK
Sbjct: 171 VGKFIPRKEREKELGEKAKLFTNVYVKNFGEDMTDDKLKEMFEKYGTITSHKVMIKDDGK 230
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEV-DGKILYVGRAQKKAERTQELKRRFEMLKIERL 300
SRGFGFVA+E P+ AE+AV NGKEV +GK +YVGRAQKKAER QELKR+FE LK+ERL
Sbjct: 231 SRGFGFVAFEDPDAAEQAVLELNGKEVAEGKCMYVGRAQKKAERQQELKRKFEQLKLERL 290
Query: 301 NRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
NRYQGVNLYVKNLDDSIDDERLRKEF PFGTITSAK
Sbjct: 291 NRYQGVNLYVKNLDDSIDDERLRKEFAPFGTITSAK 326
Score = 134 bits (337), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 70/192 (36%), Positives = 116/192 (60%), Gaps = 11/192 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV++KN + + + + + F +G+I S KV + G S+G+GFV FE +AA +++ ++
Sbjct: 193 NVYVKNFGEDMTDDKLKEMFEKYGTITSHKVMIKDDGKSRGFGFVAFEDPDAAEQAVLEL 252
Query: 172 NGM-LLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKL 220
NG + K ++VG+ + ER++EL K + N+Y+KN + +DE+L
Sbjct: 253 NGKEVAEGKCMYVGRAQKKAERQQELKRKFEQLKLERLNRYQGVNLYVKNLDDSIDDERL 312
Query: 221 KEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
++ F P+GTITS +VM +G+S+GFGFV + +PE A KAV NG+ + K LYV AQ+
Sbjct: 313 RKEFAPFGTITSAKVMMEEGRSKGFGFVCFSAPEEATKAVTEMNGRIIVTKPLYVALAQR 372
Query: 281 KAERTQELKRRF 292
K +R L ++
Sbjct: 373 KEDRKAHLASQY 384
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 129/237 (54%), Gaps = 18/237 (7%)
Query: 102 DPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFET 160
+P + ++++ +L I +++ FS+ G +LS +V +D S GY +V+F+
Sbjct: 2 NPGAPNYPMASLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 161 EEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKL 220
A ++++ +N ++ + + I +R+ L + NV+IKN ++ +++ +
Sbjct: 62 PADAERALDTMNFDMIKGRPI----RIMWSQRDPSLRKSG--VGNVFIKNLDKNIDNKAM 115
Query: 221 KEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQ 279
+ F +G I S +V ++ G S+G+GFV +E+ E A K++ NG ++GK +YVG+
Sbjct: 116 YDTFSAFGNILSCKVAQDESGVSKGYGFVHFETEEAANKSIDRVNGMLLNGKKVYVGKFI 175
Query: 280 KKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ ER +EL + ++ N+YVKN + + D++L++ F +GTITS K
Sbjct: 176 PRKEREKELGEKAKLF----------TNVYVKNFGEDMTDDKLKEMFEKYGTITSHK 222
>gi|332374002|gb|AEE62142.1| unknown [Dendroctonus ponderosae]
Length = 634
Score = 464 bits (1193), Expect = e-128, Method: Compositional matrix adjust.
Identities = 227/276 (82%), Positives = 247/276 (89%), Gaps = 4/276 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD ++GRPIRIMWSQRDPSLRKSGVGNVFIKNLD+SI
Sbjct: 53 GYAYVNFQQP--ADAERALDTMNFDLIRGRPIRIMWSQRDPSLRKSGVGNVFIKNLDRSI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKAMYDTFSAFG+ILSCKVAQDE G SKGYGFVHFETEEAANKSIEKVNGMLLN K V+
Sbjct: 111 DNKAMYDTFSAFGNILSCKVAQDENGTSKGYGFVHFETEEAANKSIEKVNGMLLNGKKVY 170
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMN-NDGK 241
VG+FIPRKEREKELGEKAKLFTNVY+KNFGED ++E+L+ MFE +G ITSY+VM+ +DGK
Sbjct: 171 VGRFIPRKEREKELGEKAKLFTNVYVKNFGEDLSEEQLRNMFEKFGKITSYKVMSKDDGK 230
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKE-VDGKILYVGRAQKKAERTQELKRRFEMLKIERL 300
S+GFGFVA+ESPE AE AV A NGKE V+GK LYVGRAQKKAER QELKRRFE LK+ERL
Sbjct: 231 SKGFGFVAFESPEAAETAVDALNGKELVEGKPLYVGRAQKKAERQQELKRRFEALKMERL 290
Query: 301 NRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
NRYQGVNLYVKNLDD+IDDERLRKEF PFGTITSAK
Sbjct: 291 NRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAK 326
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 77/212 (36%), Positives = 121/212 (57%), Gaps = 20/212 (9%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV++KN + + + + + F FG I S KV + G SKG+GFV FE+ EAA +++ +
Sbjct: 193 NVYVKNFGEDLSEEQLRNMFEKFGKITSYKVMSKDDGKSKGFGFVAFESPEAAETAVDAL 252
Query: 172 NGM-LLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKL 220
NG L+ K ++VG+ + ER++EL + + N+Y+KN + +DE+L
Sbjct: 253 NGKELVEGKPLYVGRAQKKAERQQELKRRFEALKMERLNRYQGVNLYVKNLDDTIDDERL 312
Query: 221 KEMFEPYGTITSYRVMNNDGK--------SRGFGFVAYESPEFAEKAVQAWNGKEVDGKI 272
++ F P+GTITS +VM + K S+GFGFV + SPE A KAV NG+ V K
Sbjct: 313 RKEFAPFGTITSAKVMIEENKTESFITTRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKP 372
Query: 273 LYVGRAQKKAERTQELKRRFEMLKIERLNRYQ 304
LYV AQ+K +R L ++ M ++ + +Q
Sbjct: 373 LYVALAQRKEDRKAHLTSQY-MQRMANMRMHQ 403
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 124/229 (54%), Gaps = 18/229 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L I ++D FS+ G +LS +V +D S GY +V+F+ A +++
Sbjct: 10 MASLYVGDLHSDITEAMLFDKFSSAGPVLSIRVCRDLITRRSLGYAYVNFQQPADAERAL 69
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N L+ + + I +R+ L + NV+IKN +++ + + F +G
Sbjct: 70 DTMNFDLIRGRPI----RIMWSQRDPSLRKSG--VGNVFIKNLDRSIDNKAMYDTFSAFG 123
Query: 229 TITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQE 287
I S +V ++ G S+G+GFV +E+ E A K+++ NG ++GK +YVGR + ER +E
Sbjct: 124 NILSCKVAQDENGTSKGYGFVHFETEEAANKSIEKVNGMLLNGKKVYVGRFIPRKEREKE 183
Query: 288 LKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
L + ++ N+YVKN + + +E+LR F FG ITS K
Sbjct: 184 LGEKAKLF----------TNVYVKNFGEDLSEEQLRNMFEKFGKITSYK 222
>gi|170044609|ref|XP_001849934.1| polyadenylate-binding protein 1 [Culex quinquefasciatus]
gi|167867688|gb|EDS31071.1| polyadenylate-binding protein 1 [Culex quinquefasciatus]
Length = 628
Score = 464 bits (1193), Expect = e-128, Method: Compositional matrix adjust.
Identities = 227/275 (82%), Positives = 245/275 (89%), Gaps = 3/275 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD +KGRPIRIMWSQRDPSLRKSGVGNVFIKNLDK+I
Sbjct: 44 GYAYVNFQQP--ADAERALDTMNFDLIKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKNI 101
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKAMYDTFSAFG+ILSCKVAQDE+GNSKGYGFVHFETEE+AN SIEKVNGMLLN+K VF
Sbjct: 102 DNKAMYDTFSAFGNILSCKVAQDEKGNSKGYGFVHFETEESANTSIEKVNGMLLNAKKVF 161
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDGKS 242
VG+FIPRKEREKELGEKAKLFTNVY+KNFG++ DE LKEMFE YGTITS+RVM + KS
Sbjct: 162 VGRFIPRKEREKELGEKAKLFTNVYVKNFGDELTDESLKEMFEKYGTITSHRVMIKENKS 221
Query: 243 RGFGFVAYESPEFAEKAVQAWNGKEV-DGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
RGFGFVA+E+PE AE AVQ NGKE+ DGK+LYVGRAQKK ER ELKRRFE LK+ERL
Sbjct: 222 RGFGFVAFENPESAEVAVQELNGKELGDGKVLYVGRAQKKNERQMELKRRFEQLKMERLT 281
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLYVKNLDDSIDDERLRKEF+PFGTITSAK
Sbjct: 282 RYQGVNLYVKNLDDSIDDERLRKEFSPFGTITSAK 316
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 69/192 (35%), Positives = 116/192 (60%), Gaps = 12/192 (6%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV++KN + ++++ + F +G+I S +V E S+G+GFV FE E+A +++++
Sbjct: 184 NVYVKNFGDELTDESLKEMFEKYGTITSHRVMIKE-NKSRGFGFVAFENPESAEVAVQEL 242
Query: 172 NGMLL-NSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKL 220
NG L + K+++VG+ + ER+ EL + + N+Y+KN + +DE+L
Sbjct: 243 NGKELGDGKVLYVGRAQKKNERQMELKRRFEQLKMERLTRYQGVNLYVKNLDDSIDDERL 302
Query: 221 KEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
++ F P+GTITS +VM +G+S+GFGFV + + E A KAV NG+ V K LYV AQ+
Sbjct: 303 RKEFSPFGTITSAKVMLEEGRSKGFGFVCFSAAEEATKAVTEMNGRIVGSKPLYVALAQR 362
Query: 281 KAERTQELKRRF 292
K +R L ++
Sbjct: 363 KEDRKAHLASQY 374
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 125/229 (54%), Gaps = 18/229 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQD-EQGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L I +++ FS+ G +LS +V +D S GY +V+F+ A +++
Sbjct: 1 MASLYVGDLHADITEAMLFEKFSSAGPVLSIRVCRDVVTRRSLGYAYVNFQQPADAERAL 60
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N L+ + + I +R+ L + NV+IKN ++ +++ + + F +G
Sbjct: 61 DTMNFDLIKGRPI----RIMWSQRDPSLRKSG--VGNVFIKNLDKNIDNKAMYDTFSAFG 114
Query: 229 TITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQE 287
I S +V ++ G S+G+GFV +E+ E A +++ NG ++ K ++VGR + ER +E
Sbjct: 115 NILSCKVAQDEKGNSKGYGFVHFETEESANTSIEKVNGMLLNAKKVFVGRFIPRKEREKE 174
Query: 288 LKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
L + ++ N+YVKN D + DE L++ F +GTITS +
Sbjct: 175 LGEKAKLF----------TNVYVKNFGDELTDESLKEMFEKYGTITSHR 213
>gi|350408504|ref|XP_003488426.1| PREDICTED: polyadenylate-binding protein 1-like isoform 1 [Bombus
impatiens]
Length = 630
Score = 463 bits (1192), Expect = e-128, Method: Compositional matrix adjust.
Identities = 227/276 (82%), Positives = 246/276 (89%), Gaps = 4/276 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD +KGRPIRIMWSQRDPSLRKSGVGNVFIKNLDK+I
Sbjct: 53 GYAYVNFQQP--ADAERALDTMNFDMIKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKNI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKAMYDTFSAFG+ILSCKVAQDE G SKGYGFVHFETEEAANKSI++VNGMLLN K V+
Sbjct: 111 DNKAMYDTFSAFGNILSCKVAQDESGVSKGYGFVHFETEEAANKSIDRVNGMLLNGKKVY 170
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGK 241
VGKFIPRKEREKELGEKAKLFTNVY+KNFGED D+KLK+MFE YGTITS++VM +DGK
Sbjct: 171 VGKFIPRKEREKELGEKAKLFTNVYVKNFGEDMTDDKLKDMFEKYGTITSHKVMIKDDGK 230
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEV-DGKILYVGRAQKKAERTQELKRRFEMLKIERL 300
SRGFGFVA+E P+ AE+AV NGKEV +GK +YVGRAQKKAER QELKR+FE LK+ERL
Sbjct: 231 SRGFGFVAFEDPDAAEQAVLELNGKEVAEGKCMYVGRAQKKAERQQELKRKFEQLKLERL 290
Query: 301 NRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
NRYQGVNLYVKNLDDSIDDERLRKEF PFGTITSAK
Sbjct: 291 NRYQGVNLYVKNLDDSIDDERLRKEFAPFGTITSAK 326
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 71/192 (36%), Positives = 116/192 (60%), Gaps = 11/192 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV++KN + + + + D F +G+I S KV + G S+G+GFV FE +AA +++ ++
Sbjct: 193 NVYVKNFGEDMTDDKLKDMFEKYGTITSHKVMIKDDGKSRGFGFVAFEDPDAAEQAVLEL 252
Query: 172 NGM-LLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKL 220
NG + K ++VG+ + ER++EL K + N+Y+KN + +DE+L
Sbjct: 253 NGKEVAEGKCMYVGRAQKKAERQQELKRKFEQLKLERLNRYQGVNLYVKNLDDSIDDERL 312
Query: 221 KEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
++ F P+GTITS +VM +G+S+GFGFV + +PE A KAV NG+ + K LYV AQ+
Sbjct: 313 RKEFAPFGTITSAKVMMEEGRSKGFGFVCFSAPEEATKAVTEMNGRIIVTKPLYVALAQR 372
Query: 281 KAERTQELKRRF 292
K +R L ++
Sbjct: 373 KEDRKAHLASQY 384
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 128/237 (54%), Gaps = 18/237 (7%)
Query: 102 DPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFET 160
+P + ++++ +L I +++ FS+ G +LS +V +D S GY +V+F+
Sbjct: 2 NPGAPNYPMASLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 161 EEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKL 220
A ++++ +N ++ + + I +R+ L + NV+IKN ++ +++ +
Sbjct: 62 PADAERALDTMNFDMIKGRPI----RIMWSQRDPSLRKSG--VGNVFIKNLDKNIDNKAM 115
Query: 221 KEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQ 279
+ F +G I S +V ++ G S+G+GFV +E+ E A K++ NG ++GK +YVG+
Sbjct: 116 YDTFSAFGNILSCKVAQDESGVSKGYGFVHFETEEAANKSIDRVNGMLLNGKKVYVGKFI 175
Query: 280 KKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ ER +EL + ++ N+YVKN + + D++L+ F +GTITS K
Sbjct: 176 PRKEREKELGEKAKLF----------TNVYVKNFGEDMTDDKLKDMFEKYGTITSHK 222
>gi|350408506|ref|XP_003488427.1| PREDICTED: polyadenylate-binding protein 1-like isoform 2 [Bombus
impatiens]
Length = 621
Score = 462 bits (1190), Expect = e-128, Method: Compositional matrix adjust.
Identities = 227/276 (82%), Positives = 246/276 (89%), Gaps = 4/276 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD +KGRPIRIMWSQRDPSLRKSGVGNVFIKNLDK+I
Sbjct: 53 GYAYVNFQQP--ADAERALDTMNFDMIKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKNI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKAMYDTFSAFG+ILSCKVAQDE G SKGYGFVHFETEEAANKSI++VNGMLLN K V+
Sbjct: 111 DNKAMYDTFSAFGNILSCKVAQDESGVSKGYGFVHFETEEAANKSIDRVNGMLLNGKKVY 170
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGK 241
VGKFIPRKEREKELGEKAKLFTNVY+KNFGED D+KLK+MFE YGTITS++VM +DGK
Sbjct: 171 VGKFIPRKEREKELGEKAKLFTNVYVKNFGEDMTDDKLKDMFEKYGTITSHKVMIKDDGK 230
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEV-DGKILYVGRAQKKAERTQELKRRFEMLKIERL 300
SRGFGFVA+E P+ AE+AV NGKEV +GK +YVGRAQKKAER QELKR+FE LK+ERL
Sbjct: 231 SRGFGFVAFEDPDAAEQAVLELNGKEVAEGKCMYVGRAQKKAERQQELKRKFEQLKLERL 290
Query: 301 NRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
NRYQGVNLYVKNLDDSIDDERLRKEF PFGTITSAK
Sbjct: 291 NRYQGVNLYVKNLDDSIDDERLRKEFAPFGTITSAK 326
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 71/192 (36%), Positives = 116/192 (60%), Gaps = 11/192 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV++KN + + + + D F +G+I S KV + G S+G+GFV FE +AA +++ ++
Sbjct: 193 NVYVKNFGEDMTDDKLKDMFEKYGTITSHKVMIKDDGKSRGFGFVAFEDPDAAEQAVLEL 252
Query: 172 NGM-LLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKL 220
NG + K ++VG+ + ER++EL K + N+Y+KN + +DE+L
Sbjct: 253 NGKEVAEGKCMYVGRAQKKAERQQELKRKFEQLKLERLNRYQGVNLYVKNLDDSIDDERL 312
Query: 221 KEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
++ F P+GTITS +VM +G+S+GFGFV + +PE A KAV NG+ + K LYV AQ+
Sbjct: 313 RKEFAPFGTITSAKVMMEEGRSKGFGFVCFSAPEEATKAVTEMNGRIIVTKPLYVALAQR 372
Query: 281 KAERTQELKRRF 292
K +R L ++
Sbjct: 373 KEDRKAHLASQY 384
Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 128/237 (54%), Gaps = 18/237 (7%)
Query: 102 DPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFET 160
+P + ++++ +L I +++ FS+ G +LS +V +D S GY +V+F+
Sbjct: 2 NPGAPNYPMASLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 161 EEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKL 220
A ++++ +N ++ + + I +R+ L + NV+IKN ++ +++ +
Sbjct: 62 PADAERALDTMNFDMIKGRPI----RIMWSQRDPSLRKSG--VGNVFIKNLDKNIDNKAM 115
Query: 221 KEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQ 279
+ F +G I S +V ++ G S+G+GFV +E+ E A K++ NG ++GK +YVG+
Sbjct: 116 YDTFSAFGNILSCKVAQDESGVSKGYGFVHFETEEAANKSIDRVNGMLLNGKKVYVGKFI 175
Query: 280 KKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ ER +EL + ++ N+YVKN + + D++L+ F +GTITS K
Sbjct: 176 PRKEREKELGEKAKLF----------TNVYVKNFGEDMTDDKLKDMFEKYGTITSHK 222
>gi|332030569|gb|EGI70257.1| Polyadenylate-binding protein 1 [Acromyrmex echinatior]
Length = 657
Score = 461 bits (1186), Expect = e-127, Method: Compositional matrix adjust.
Identities = 223/262 (85%), Positives = 240/262 (91%), Gaps = 2/262 (0%)
Query: 77 TERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGS 136
ERALDTMNFD +KGRPIRIMWSQRDPSLRKSGVGNVFIKNLDK+IDNKAMYDTFSAFG+
Sbjct: 87 AERALDTMNFDIIKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKNIDNKAMYDTFSAFGN 146
Query: 137 ILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKEL 196
ILSCKV QDE G SKGYGFVHFETEEAANKSIEKVNGMLLN K V+VGKFIPRKER+KEL
Sbjct: 147 ILSCKVTQDESGASKGYGFVHFETEEAANKSIEKVNGMLLNGKKVYVGKFIPRKERQKEL 206
Query: 197 GEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPEF 255
GEKAKLFTNVY+KNFGED D+KLKEMFE YGTITS++VM +DGKSRGFGFVA+E P
Sbjct: 207 GEKAKLFTNVYVKNFGEDMTDDKLKEMFEKYGTITSHKVMIKDDGKSRGFGFVAFEDPNS 266
Query: 256 AEKAVQAWNGKEV-DGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
AE+AV NGKE+ +GK +YVGRAQKKAER QELKR+FE LKIERLNRYQGVNLYVKNLD
Sbjct: 267 AEQAVLDLNGKEIAEGKCMYVGRAQKKAERQQELKRKFEQLKIERLNRYQGVNLYVKNLD 326
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
D+IDDERLRKEFTPFGTITSAK
Sbjct: 327 DTIDDERLRKEFTPFGTITSAK 348
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 70/192 (36%), Positives = 113/192 (58%), Gaps = 11/192 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV++KN + + + + + F +G+I S KV + G S+G+GFV FE +A +++ +
Sbjct: 215 NVYVKNFGEDMTDDKLKEMFEKYGTITSHKVMIKDDGKSRGFGFVAFEDPNSAEQAVLDL 274
Query: 172 NGM-LLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKL 220
NG + K ++VG+ + ER++EL K + N+Y+KN + +DE+L
Sbjct: 275 NGKEIAEGKCMYVGRAQKKAERQQELKRKFEQLKIERLNRYQGVNLYVKNLDDTIDDERL 334
Query: 221 KEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
++ F P+GTITS +VM +G+S+GFGFV + PE A KAV NG+ V K LYV AQ+
Sbjct: 335 RKEFTPFGTITSAKVMMEEGRSKGFGFVCFSQPEEATKAVTEMNGRIVGSKPLYVALAQR 394
Query: 281 KAERTQELKRRF 292
K +R L ++
Sbjct: 395 KEDRKAHLASQY 406
>gi|383862667|ref|XP_003706805.1| PREDICTED: polyadenylate-binding protein 1-like isoform 1
[Megachile rotundata]
Length = 630
Score = 461 bits (1185), Expect = e-127, Method: Compositional matrix adjust.
Identities = 226/276 (81%), Positives = 246/276 (89%), Gaps = 4/276 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD +KGRPIRIMWSQRDPSLRKSGVGNVFIKNLDK+I
Sbjct: 53 GYAYVNFQQP--ADAERALDTMNFDMIKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKNI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKAMYDTFSAFG+ILSCKVAQDE G SKGYGFVHFETEEAANKSI+KVNGMLLN K V+
Sbjct: 111 DNKAMYDTFSAFGNILSCKVAQDESGVSKGYGFVHFETEEAANKSIDKVNGMLLNGKKVY 170
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGK 241
VGKFIPRKEREKELGEKAKLFTNVY+KNFGED D+KLKEMFE YGTITS++VM +DGK
Sbjct: 171 VGKFIPRKEREKELGEKAKLFTNVYVKNFGEDMTDDKLKEMFEKYGTITSHKVMIKDDGK 230
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEV-DGKILYVGRAQKKAERTQELKRRFEMLKIERL 300
SRGFGFVA+E P+ AE+AV NGKEV +GK +YVGRAQKKAER QELKR+FE LK+ERL
Sbjct: 231 SRGFGFVAFEDPDAAEQAVLELNGKEVAEGKCMYVGRAQKKAERQQELKRKFEQLKLERL 290
Query: 301 NRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+RYQGVNLYVKNLDDSI+DERLR+EF PFGTITSAK
Sbjct: 291 SRYQGVNLYVKNLDDSINDERLRREFAPFGTITSAK 326
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 72/192 (37%), Positives = 115/192 (59%), Gaps = 11/192 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV++KN + + + + + F +G+I S KV + G S+G+GFV FE +AA +++ ++
Sbjct: 193 NVYVKNFGEDMTDDKLKEMFEKYGTITSHKVMIKDDGKSRGFGFVAFEDPDAAEQAVLEL 252
Query: 172 NGM-LLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKL 220
NG + K ++VG+ + ER++EL K + N+Y+KN + NDE+L
Sbjct: 253 NGKEVAEGKCMYVGRAQKKAERQQELKRKFEQLKLERLSRYQGVNLYVKNLDDSINDERL 312
Query: 221 KEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
+ F P+GTITS +VM DG+S+GFGFV + +PE A KAV NG+ + K LYV AQ+
Sbjct: 313 RREFAPFGTITSAKVMMEDGRSKGFGFVCFSAPEEATKAVTEMNGRIIVTKPLYVALAQR 372
Query: 281 KAERTQELKRRF 292
K +R L ++
Sbjct: 373 KEDRKAHLASQY 384
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 129/237 (54%), Gaps = 18/237 (7%)
Query: 102 DPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFET 160
+P + ++++ +L I +++ FS+ G +LS +V +D S GY +V+F+
Sbjct: 2 NPGAPNYPMASLYVGDLHADITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 161 EEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKL 220
A ++++ +N ++ + + I +R+ L + NV+IKN ++ +++ +
Sbjct: 62 PADAERALDTMNFDMIKGRPI----RIMWSQRDPSLRKSG--VGNVFIKNLDKNIDNKAM 115
Query: 221 KEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQ 279
+ F +G I S +V ++ G S+G+GFV +E+ E A K++ NG ++GK +YVG+
Sbjct: 116 YDTFSAFGNILSCKVAQDESGVSKGYGFVHFETEEAANKSIDKVNGMLLNGKKVYVGKFI 175
Query: 280 KKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ ER +EL + ++ N+YVKN + + D++L++ F +GTITS K
Sbjct: 176 PRKEREKELGEKAKLF----------TNVYVKNFGEDMTDDKLKEMFEKYGTITSHK 222
>gi|383862669|ref|XP_003706806.1| PREDICTED: polyadenylate-binding protein 1-like isoform 2
[Megachile rotundata]
Length = 612
Score = 460 bits (1183), Expect = e-127, Method: Compositional matrix adjust.
Identities = 226/276 (81%), Positives = 246/276 (89%), Gaps = 4/276 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD +KGRPIRIMWSQRDPSLRKSGVGNVFIKNLDK+I
Sbjct: 53 GYAYVNFQQP--ADAERALDTMNFDMIKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKNI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKAMYDTFSAFG+ILSCKVAQDE G SKGYGFVHFETEEAANKSI+KVNGMLLN K V+
Sbjct: 111 DNKAMYDTFSAFGNILSCKVAQDESGVSKGYGFVHFETEEAANKSIDKVNGMLLNGKKVY 170
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGK 241
VGKFIPRKEREKELGEKAKLFTNVY+KNFGED D+KLKEMFE YGTITS++VM +DGK
Sbjct: 171 VGKFIPRKEREKELGEKAKLFTNVYVKNFGEDMTDDKLKEMFEKYGTITSHKVMIKDDGK 230
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEV-DGKILYVGRAQKKAERTQELKRRFEMLKIERL 300
SRGFGFVA+E P+ AE+AV NGKEV +GK +YVGRAQKKAER QELKR+FE LK+ERL
Sbjct: 231 SRGFGFVAFEDPDAAEQAVLELNGKEVAEGKCMYVGRAQKKAERQQELKRKFEQLKLERL 290
Query: 301 NRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+RYQGVNLYVKNLDDSI+DERLR+EF PFGTITSAK
Sbjct: 291 SRYQGVNLYVKNLDDSINDERLRREFAPFGTITSAK 326
Score = 137 bits (346), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 72/192 (37%), Positives = 115/192 (59%), Gaps = 11/192 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV++KN + + + + + F +G+I S KV + G S+G+GFV FE +AA +++ ++
Sbjct: 193 NVYVKNFGEDMTDDKLKEMFEKYGTITSHKVMIKDDGKSRGFGFVAFEDPDAAEQAVLEL 252
Query: 172 NGM-LLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKL 220
NG + K ++VG+ + ER++EL K + N+Y+KN + NDE+L
Sbjct: 253 NGKEVAEGKCMYVGRAQKKAERQQELKRKFEQLKLERLSRYQGVNLYVKNLDDSINDERL 312
Query: 221 KEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
+ F P+GTITS +VM DG+S+GFGFV + +PE A KAV NG+ + K LYV AQ+
Sbjct: 313 RREFAPFGTITSAKVMMEDGRSKGFGFVCFSAPEEATKAVTEMNGRIIVTKPLYVALAQR 372
Query: 281 KAERTQELKRRF 292
K +R L ++
Sbjct: 373 KEDRKAHLASQY 384
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 129/237 (54%), Gaps = 18/237 (7%)
Query: 102 DPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFET 160
+P + ++++ +L I +++ FS+ G +LS +V +D S GY +V+F+
Sbjct: 2 NPGAPNYPMASLYVGDLHADITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 161 EEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKL 220
A ++++ +N ++ + + I +R+ L + NV+IKN ++ +++ +
Sbjct: 62 PADAERALDTMNFDMIKGRPI----RIMWSQRDPSLRKSG--VGNVFIKNLDKNIDNKAM 115
Query: 221 KEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQ 279
+ F +G I S +V ++ G S+G+GFV +E+ E A K++ NG ++GK +YVG+
Sbjct: 116 YDTFSAFGNILSCKVAQDESGVSKGYGFVHFETEEAANKSIDKVNGMLLNGKKVYVGKFI 175
Query: 280 KKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ ER +EL + ++ N+YVKN + + D++L++ F +GTITS K
Sbjct: 176 PRKEREKELGEKAKLF----------TNVYVKNFGEDMTDDKLKEMFEKYGTITSHK 222
>gi|242025596|ref|XP_002433210.1| Polyadenylate-binding protein, putative [Pediculus humanus
corporis]
gi|212518751|gb|EEB20472.1| Polyadenylate-binding protein, putative [Pediculus humanus
corporis]
Length = 637
Score = 459 bits (1181), Expect = e-127, Method: Compositional matrix adjust.
Identities = 225/276 (81%), Positives = 247/276 (89%), Gaps = 4/276 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMN+D LKG+PIRIMWSQRDPSLRKSGVGNVFIKNLDKSI
Sbjct: 53 GYAYVNFQQP--ADAERALDTMNYDPLKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKAMYDTFS FG+ILSCKVAQDE G SKGYGFVHFETEEAANKSI+KVNGMLLN K VF
Sbjct: 111 DNKAMYDTFSTFGNILSCKVAQDESGTSKGYGFVHFETEEAANKSIDKVNGMLLNGKRVF 170
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMN-NDGK 241
VGKFIPRKEREKELGEKAK FTNVY+KNFGEDF+D+ L+EMFE YG ITS++VM+ +DGK
Sbjct: 171 VGKFIPRKEREKELGEKAKRFTNVYVKNFGEDFSDDLLREMFEKYGRITSHKVMSKDDGK 230
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKE-VDGKILYVGRAQKKAERTQELKRRFEMLKIERL 300
S+GFGFVA+E PE AEKAV + NGKE V+GK L+VGRAQKKAER QELKR+FE LK+ERL
Sbjct: 231 SKGFGFVAFEDPEAAEKAVASLNGKEIVEGKPLFVGRAQKKAERQQELKRKFEQLKMERL 290
Query: 301 NRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+RYQGVNLYVKN+DD+IDDERLRKEFTPFGTITSAK
Sbjct: 291 SRYQGVNLYVKNIDDNIDDERLRKEFTPFGTITSAK 326
Score = 140 bits (354), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 76/192 (39%), Positives = 114/192 (59%), Gaps = 11/192 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV++KN + + + + F +G I S KV + G SKG+GFV FE EAA K++ +
Sbjct: 193 NVYVKNFGEDFSDDLLREMFEKYGRITSHKVMSKDDGKSKGFGFVAFEDPEAAEKAVASL 252
Query: 172 NGM-LLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKL 220
NG ++ K +FVG+ + ER++EL K + N+Y+KN ++ +DE+L
Sbjct: 253 NGKEIVEGKPLFVGRAQKKAERQQELKRKFEQLKMERLSRYQGVNLYVKNIDDNIDDERL 312
Query: 221 KEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
++ F P+GTITS +VM DG+S+GFGFV + S E A KAV NG+ V K LYV AQ+
Sbjct: 313 RKEFTPFGTITSAKVMLEDGRSKGFGFVCFSSAEEATKAVTEMNGRIVGSKPLYVALAQR 372
Query: 281 KAERTQELKRRF 292
K +R L ++
Sbjct: 373 KEDRKAHLASQY 384
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 123/229 (53%), Gaps = 18/229 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + +++ FS+ G +LS +V +D S GY +V+F+ A +++
Sbjct: 10 MASLYVGDLHSDVTEAMLFEKFSSAGPVLSIRVCRDMITKRSLGYAYVNFQQPADAERAL 69
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N L K + I +R+ L + NV+IKN + +++ + + F +G
Sbjct: 70 DTMNYDPLKGKPI----RIMWSQRDPSLRKSG--VGNVFIKNLDKSIDNKAMYDTFSTFG 123
Query: 229 TITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQE 287
I S +V ++ G S+G+GFV +E+ E A K++ NG ++GK ++VG+ + ER +E
Sbjct: 124 NILSCKVAQDESGTSKGYGFVHFETEEAANKSIDKVNGMLLNGKRVFVGKFIPRKEREKE 183
Query: 288 LKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
L E+ R+ N+YVKN + D+ LR+ F +G ITS K
Sbjct: 184 LG--------EKAKRF--TNVYVKNFGEDFSDDLLREMFEKYGRITSHK 222
>gi|156554126|ref|XP_001604025.1| PREDICTED: polyadenylate-binding protein 1-like isoform 1 [Nasonia
vitripennis]
Length = 627
Score = 459 bits (1180), Expect = e-126, Method: Compositional matrix adjust.
Identities = 223/276 (80%), Positives = 246/276 (89%), Gaps = 4/276 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD +KGRPIRIMWSQRDPSLR+SGVGNVFIKNLDK+I
Sbjct: 53 GYAYVNFQQP--ADAERALDTMNFDIIKGRPIRIMWSQRDPSLRRSGVGNVFIKNLDKNI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKAMYDTFSAFG+ILSC+VAQDE G+SKGYGFVHFETEEAANKSI++VNGMLLN K V+
Sbjct: 111 DNKAMYDTFSAFGNILSCRVAQDESGSSKGYGFVHFETEEAANKSIDRVNGMLLNGKKVY 170
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMN-NDGK 241
VGKFI RKEREKELGEKAKLFTNVY+KNFGED D+KLKEMFE YGTITS++VM+ +DGK
Sbjct: 171 VGKFISRKEREKELGEKAKLFTNVYVKNFGEDMTDDKLKEMFEKYGTITSHKVMSKDDGK 230
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEV-DGKILYVGRAQKKAERTQELKRRFEMLKIERL 300
SRGFGFVA+E P A++AV NGKE+ +GKI+YVGRAQKKAER QELKR+FE LKIERL
Sbjct: 231 SRGFGFVAFEDPNAADRAVADLNGKEIAEGKIMYVGRAQKKAERQQELKRKFEQLKIERL 290
Query: 301 NRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
NRYQGVNLYVKNLDD+IDDERLRKEF PFGTITS K
Sbjct: 291 NRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSVK 326
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 72/192 (37%), Positives = 114/192 (59%), Gaps = 11/192 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV++KN + + + + + F +G+I S KV + G S+G+GFV FE AA++++ +
Sbjct: 193 NVYVKNFGEDMTDDKLKEMFEKYGTITSHKVMSKDDGKSRGFGFVAFEDPNAADRAVADL 252
Query: 172 NGM-LLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKL 220
NG + KI++VG+ + ER++EL K + N+Y+KN + +DE+L
Sbjct: 253 NGKEIAEGKIMYVGRAQKKAERQQELKRKFEQLKIERLNRYQGVNLYVKNLDDTIDDERL 312
Query: 221 KEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
++ F P+GTITS +VM DG+S+GFGFV + E A KAV NG+ V K LYV AQ+
Sbjct: 313 RKEFAPFGTITSVKVMMEDGRSKGFGFVCFSLAEEATKAVTEMNGRIVGSKPLYVALAQR 372
Query: 281 KAERTQELKRRF 292
K +R L ++
Sbjct: 373 KEDRKAHLASQY 384
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 128/237 (54%), Gaps = 18/237 (7%)
Query: 102 DPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFET 160
+P + ++++ +L I +++ FS+ G +LS +V +D S GY +V+F+
Sbjct: 2 NPGAPNYPMASLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDAVTRRSLGYAYVNFQQ 61
Query: 161 EEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKL 220
A ++++ +N ++ + + I +R+ L NV+IKN ++ +++ +
Sbjct: 62 PADAERALDTMNFDIIKGRPI----RIMWSQRDPSLRRSG--VGNVFIKNLDKNIDNKAM 115
Query: 221 KEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQ 279
+ F +G I S RV ++ G S+G+GFV +E+ E A K++ NG ++GK +YVG+
Sbjct: 116 YDTFSAFGNILSCRVAQDESGSSKGYGFVHFETEEAANKSIDRVNGMLLNGKKVYVGKFI 175
Query: 280 KKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ ER +EL + ++ N+YVKN + + D++L++ F +GTITS K
Sbjct: 176 SRKEREKELGEKAKLF----------TNVYVKNFGEDMTDDKLKEMFEKYGTITSHK 222
>gi|312378306|gb|EFR24923.1| hypothetical protein AND_10202 [Anopheles darlingi]
Length = 645
Score = 456 bits (1173), Expect = e-126, Method: Compositional matrix adjust.
Identities = 221/275 (80%), Positives = 239/275 (86%), Gaps = 3/275 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD +KGRPIRIMWSQRDPSLRKSGVGNVFIKNLDK I
Sbjct: 53 GYAYVNFQQP--ADAERALDTMNFDTIKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKKI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKAMYDTFSAFG+ILSCKVAQDE+G SKGYGFVHFETEE+AN SIEKVNGMLLN K VF
Sbjct: 111 DNKAMYDTFSAFGNILSCKVAQDEKGQSKGYGFVHFETEESANTSIEKVNGMLLNEKKVF 170
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDGKS 242
VG+FI RKEREKELGEKAKLFTNVY+KNFGED +E L EMFE YG+ITS+RVM DGKS
Sbjct: 171 VGRFISRKEREKELGEKAKLFTNVYVKNFGEDLTEEALHEMFEKYGSITSHRVMMKDGKS 230
Query: 243 RGFGFVAYESPEFAEKAVQAWNGKEV-DGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
RGFGFVA+E+P+ AE+AVQ N KE+ DGK+LYVGRAQKK ER ELKRRFE LK+ERL
Sbjct: 231 RGFGFVAFENPDAAERAVQELNAKELSDGKVLYVGRAQKKNERQMELKRRFEQLKMERLT 290
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RY GVNLYVKNLDD+IDDERLRKEF P+GTITSAK
Sbjct: 291 RYHGVNLYVKNLDDTIDDERLRKEFAPYGTITSAK 325
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 75/201 (37%), Positives = 125/201 (62%), Gaps = 16/201 (7%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV++KN + + +A+++ F +GSI S +V + G S+G+GFV FE +AA ++++++
Sbjct: 193 NVYVKNFGEDLTEEALHEMFEKYGSITSHRVMMKD-GKSRGFGFVAFENPDAAERAVQEL 251
Query: 172 NGM-LLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKL 220
N L + K+++VG+ + ER+ EL + + N+Y+KN + +DE+L
Sbjct: 252 NAKELSDGKVLYVGRAQKKNERQMELKRRFEQLKMERLTRYHGVNLYVKNLDDTIDDERL 311
Query: 221 KEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
++ F PYGTITS +VM ++G+S+GFGFV + +P+ A KAV NG+ V K LYV AQ+
Sbjct: 312 RKEFAPYGTITSAKVMLDEGRSKGFGFVCFSAPDEATKAVTEMNGRIVGSKPLYVALAQR 371
Query: 281 KAERTQELKRRFEMLKIERLN 301
K ER L ++ I+R+N
Sbjct: 372 KEERKSHLASQY----IQRVN 388
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 123/229 (53%), Gaps = 18/229 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L I +++ FS+ G +LS +V +D S GY +V+F+ A +++
Sbjct: 10 MASLYVGDLHADITEATLFEKFSSAGPVLSIRVCRDLITRRSLGYAYVNFQQPADAERAL 69
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N + + + I +R+ L + NV+IKN + +++ + + F +G
Sbjct: 70 DTMNFDTIKGRPI----RIMWSQRDPSLRKSG--VGNVFIKNLDKKIDNKAMYDTFSAFG 123
Query: 229 TITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQE 287
I S +V ++ G+S+G+GFV +E+ E A +++ NG ++ K ++VGR + ER +E
Sbjct: 124 NILSCKVAQDEKGQSKGYGFVHFETEESANTSIEKVNGMLLNEKKVFVGRFISRKEREKE 183
Query: 288 LKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
L + ++ N+YVKN + + +E L + F +G+ITS +
Sbjct: 184 LGEKAKLF----------TNVYVKNFGEDLTEEALHEMFEKYGSITSHR 222
>gi|119113388|ref|XP_309558.3| AGAP011092-PA [Anopheles gambiae str. PEST]
gi|116131767|gb|EAA05186.3| AGAP011092-PA [Anopheles gambiae str. PEST]
Length = 634
Score = 454 bits (1169), Expect = e-125, Method: Compositional matrix adjust.
Identities = 220/275 (80%), Positives = 239/275 (86%), Gaps = 3/275 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD +KGRPIRIMWSQRDPSLRKSGVGNVFIKNLDK I
Sbjct: 44 GYAYVNFQQP--ADAERALDTMNFDPIKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKKI 101
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKAMYDTFSAFG+ILSCKVAQDE+G SKGYGFVHFETEE+AN SIEKVNGMLLN K V+
Sbjct: 102 DNKAMYDTFSAFGNILSCKVAQDEKGQSKGYGFVHFETEESANTSIEKVNGMLLNEKKVY 161
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDGKS 242
VG+FI RKEREKELGEKAKLFTNVY+KNFGED +E L++MFE +G ITS+RVM DGKS
Sbjct: 162 VGRFISRKEREKELGEKAKLFTNVYVKNFGEDLTEEALRDMFEKFGPITSHRVMTKDGKS 221
Query: 243 RGFGFVAYESPEFAEKAVQAWNGKEV-DGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
RGFGFVA+E PE AE+AVQ NGKE+ DGK+LYVGRAQKK ER ELKRRFE LK+ERL
Sbjct: 222 RGFGFVAFEKPEDAEEAVQKLNGKELSDGKVLYVGRAQKKNERQMELKRRFEQLKMERLT 281
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RY GVNLYVKNLDD+IDDERLRKEF P+GTITSAK
Sbjct: 282 RYHGVNLYVKNLDDTIDDERLRKEFAPYGTITSAK 316
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 78/201 (38%), Positives = 123/201 (61%), Gaps = 16/201 (7%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV++KN + + +A+ D F FG I S +V + G S+G+GFV FE E A ++++K+
Sbjct: 184 NVYVKNFGEDLTEEALRDMFEKFGPITSHRVMTKD-GKSRGFGFVAFEKPEDAEEAVQKL 242
Query: 172 NGM-LLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKL 220
NG L + K+++VG+ + ER+ EL + + N+Y+KN + +DE+L
Sbjct: 243 NGKELSDGKVLYVGRAQKKNERQMELKRRFEQLKMERLTRYHGVNLYVKNLDDTIDDERL 302
Query: 221 KEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
++ F PYGTITS +VM ++G+S+GFGFV + +P+ A KAV NG+ V K LYV AQ+
Sbjct: 303 RKEFAPYGTITSAKVMLDEGRSKGFGFVCFSAPDEATKAVTEMNGRIVGSKPLYVALAQR 362
Query: 281 KAERTQELKRRFEMLKIERLN 301
K ER L ++ I+R+N
Sbjct: 363 KEERKSHLASQY----IQRVN 379
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 122/229 (53%), Gaps = 18/229 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L I +++ FS+ G +LS +V +D S GY +V+F+ A +++
Sbjct: 1 MASLYVGDLHSDITEATLFEKFSSAGPVLSIRVCRDLITRRSLGYAYVNFQQPADAERAL 60
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N + + + I +R+ L + NV+IKN + +++ + + F +G
Sbjct: 61 DTMNFDPIKGRPI----RIMWSQRDPSLRKSG--VGNVFIKNLDKKIDNKAMYDTFSAFG 114
Query: 229 TITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQE 287
I S +V ++ G+S+G+GFV +E+ E A +++ NG ++ K +YVGR + ER +E
Sbjct: 115 NILSCKVAQDEKGQSKGYGFVHFETEESANTSIEKVNGMLLNEKKVYVGRFISRKEREKE 174
Query: 288 LKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
L + ++ N+YVKN + + +E LR F FG ITS +
Sbjct: 175 LGEKAKLF----------TNVYVKNFGEDLTEEALRDMFEKFGPITSHR 213
>gi|307095208|gb|ADN29910.1| poly A binding protein cytoplasmic 1 isoform 1-like protein
[Triatoma matogrossensis]
Length = 341
Score = 454 bits (1168), Expect = e-125, Method: Compositional matrix adjust.
Identities = 227/276 (82%), Positives = 245/276 (88%), Gaps = 4/276 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD LKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDK+I
Sbjct: 55 GYAYVNFQQP--ADAERALDTMNFDTLKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKNI 112
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKAMYDTFSAFG+ILSCKVAQDE G+SKGYGFVHFETEEAA KSI+KVNGMLLN K VF
Sbjct: 113 DNKAMYDTFSAFGNILSCKVAQDESGSSKGYGFVHFETEEAATKSIDKVNGMLLNGKKVF 172
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYR-VMNNDGK 241
VGKFIPRKEREKELGEKAKLFTNVY+KNFGEDF D+ LKEMFE YG ITS+ V+N D K
Sbjct: 173 VGKFIPRKEREKELGEKAKLFTNVYVKNFGEDFTDDMLKEMFEKYGPITSHTVVVNKDQK 232
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKE-VDGKILYVGRAQKKAERTQELKRRFEMLKIERL 300
SRGFGFVA+E PE AE+AV+ NGKE ++GK LYVGRAQKKAER QELKR+FE LK+ER+
Sbjct: 233 SRGFGFVAFEDPEAAERAVEDLNGKEIIEGKQLYVGRAQKKAERQQELKRKFEQLKMERM 292
Query: 301 NRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
NRYQGVNLYVKNLDD+IDDERLRKEF+PFGTITSAK
Sbjct: 293 NRYQGVNLYVKNLDDTIDDERLRKEFSPFGTITSAK 328
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/147 (34%), Positives = 87/147 (59%), Gaps = 11/147 (7%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV++KN + + + + F +G I S V ++ S+G+GFV FE EAA +++E +
Sbjct: 195 NVYVKNFGEDFTDDMLKEMFEKYGPITSHTVVVNKDQKSRGFGFVAFEDPEAAERAVEDL 254
Query: 172 NGM-LLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKL 220
NG ++ K ++VG+ + ER++EL K + N+Y+KN + +DE+L
Sbjct: 255 NGKEIIEGKQLYVGRAQKKAERQQELKRKFEQLKMERMNRYQGVNLYVKNLDDTIDDERL 314
Query: 221 KEMFEPYGTITSYRVMNNDGKSRGFGF 247
++ F P+GTITS +VM + +S+GFGF
Sbjct: 315 RKEFSPFGTITSAKVMLEERRSKGFGF 341
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 122/227 (53%), Gaps = 18/227 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + +++ FS+ G +LS +V +D S GY +V+F+ A +++
Sbjct: 12 MASLYVGDLHSDVTKAMLFEKFSSAGPVLSIRVCKDMITRRSLGYAYVNFQQPADAERAL 71
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N L + + I +R+ L + NV+IKN ++ +++ + + F +G
Sbjct: 72 DTMNFDTLKGRPI----RIMWSQRDPSLRKSG--VGNVFIKNLDKNIDNKAMYDTFSAFG 125
Query: 229 TITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQE 287
I S +V ++ G S+G+GFV +E+ E A K++ NG ++GK ++VG+ + ER +E
Sbjct: 126 NILSCKVAQDESGSSKGYGFVHFETEEAATKSIDKVNGMLLNGKKVFVGKFIPRKEREKE 185
Query: 288 LKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITS 334
L + ++ N+YVKN + D+ L++ F +G ITS
Sbjct: 186 LGEKAKLF----------TNVYVKNFGEDFTDDMLKEMFEKYGPITS 222
>gi|148298695|ref|NP_001091823.1| poly A binding protein [Bombyx mori]
gi|111608107|gb|ABH10797.1| poly A binding protein [Bombyx mori]
Length = 603
Score = 454 bits (1167), Expect = e-125, Method: Compositional matrix adjust.
Identities = 223/276 (80%), Positives = 243/276 (88%), Gaps = 4/276 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD +KGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI
Sbjct: 44 GYAYVNFQQP--TDAERALDTMNFDIIKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 101
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA++DTFSAFG+ILSCKVAQDE G SKGYGFVHFETEEAANKSIEKVNGMLLN K+V+
Sbjct: 102 DNKALFDTFSAFGNILSCKVAQDETGASKGYGFVHFETEEAANKSIEKVNGMLLNGKMVY 161
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGK 241
VG+FIPRKEREKELGEKAKLFTNVY+KNFGEDF+DE LK+MFE YG ITS++VM +DG
Sbjct: 162 VGRFIPRKEREKELGEKAKLFTNVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGN 221
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKE-VDGKILYVGRAQKKAERTQELKRRFEMLKIERL 300
SRGFGFVA+E P+ AE+A NGKE V+GK LYVGRAQKKAER +ELKR+FE LK ERL
Sbjct: 222 SRGFGFVAFEDPDAAERACIELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERL 281
Query: 301 NRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLYVKNLDD+IDDERLRKEF PFGTITSAK
Sbjct: 282 TRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAK 317
Score = 144 bits (362), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 77/192 (40%), Positives = 116/192 (60%), Gaps = 11/192 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV++KN + ++ + D F +G I S KV + GNS+G+GFV FE +AA ++ ++
Sbjct: 184 NVYVKNFGEDFSDEMLKDMFEKYGRITSHKVMYKDDGNSRGFGFVAFEDPDAAERACIEL 243
Query: 172 NGM-LLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKL 220
NG L+ K ++VG+ + ER+KEL K + N+Y+KN + +DE+L
Sbjct: 244 NGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERL 303
Query: 221 KEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
++ F P+GTITS +VM DG+S+GFGFV + SPE A KAV NG+ V K LYV AQ+
Sbjct: 304 RKEFAPFGTITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQR 363
Query: 281 KAERTQELKRRF 292
K +R L ++
Sbjct: 364 KEDRKAHLTSQY 375
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 123/229 (53%), Gaps = 18/229 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L I +++ FS G +LS +V +D S GY +V+F+ A +++
Sbjct: 1 MASLYVGDLHSDITEAMLFEKFSTAGPVLSIRVCRDMITRRSLGYAYVNFQQPTDAERAL 60
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N ++ + + I +R+ L + NV+IKN + +++ L + F +G
Sbjct: 61 DTMNFDIIKGRPI----RIMWSQRDPSLRKSG--VGNVFIKNLDKSIDNKALFDTFSAFG 114
Query: 229 TITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQE 287
I S +V ++ G S+G+GFV +E+ E A K+++ NG ++GK++YVGR + ER +E
Sbjct: 115 NILSCKVAQDETGASKGYGFVHFETEEAANKSIEKVNGMLLNGKMVYVGRFIPRKEREKE 174
Query: 288 LKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
L + ++ N+YVKN + DE L+ F +G ITS K
Sbjct: 175 LGEKAKLF----------TNVYVKNFGEDFSDEMLKDMFEKYGRITSHK 213
>gi|357628251|gb|EHJ77641.1| poly A binding protein [Danaus plexippus]
Length = 601
Score = 452 bits (1163), Expect = e-124, Method: Compositional matrix adjust.
Identities = 223/276 (80%), Positives = 241/276 (87%), Gaps = 4/276 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD +KGRPIRIMWSQRDPSLRKSGVGNVFIKNLDK+I
Sbjct: 44 GYAYVNFQQPS--DAERALDTMNFDMIKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKAI 101
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKAMYDTFSAFG+ILSCKVAQDE G SKGYGFVHFETEEAANKSIEKVNGMLLN K V+
Sbjct: 102 DNKAMYDTFSAFGNILSCKVAQDENGASKGYGFVHFETEEAANKSIEKVNGMLLNGKKVY 161
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGK 241
VG+FIPRKEREKELGEKAKLFTNVY+KNFGEDF+DE L++MFE YG ITS++VM DG
Sbjct: 162 VGRFIPRKEREKELGEKAKLFTNVYVKNFGEDFSDEMLRDMFEKYGRITSHKVMYKEDGS 221
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKE-VDGKILYVGRAQKKAERTQELKRRFEMLKIERL 300
SRGFGFVA+E P+ AE+A NGKE V+GK LYVGRAQKKAER +ELKR+FE LK ERL
Sbjct: 222 SRGFGFVAFEDPDAAERACLELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERL 281
Query: 301 NRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLYVKNLDD+IDDERLRKEF PFGTITSAK
Sbjct: 282 TRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAK 317
Score = 143 bits (361), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 77/192 (40%), Positives = 116/192 (60%), Gaps = 11/192 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV++KN + ++ + D F +G I S KV E G+S+G+GFV FE +AA ++ ++
Sbjct: 184 NVYVKNFGEDFSDEMLRDMFEKYGRITSHKVMYKEDGSSRGFGFVAFEDPDAAERACLEL 243
Query: 172 NGM-LLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKL 220
NG L+ K ++VG+ + ER+KEL K + N+Y+KN + +DE+L
Sbjct: 244 NGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERL 303
Query: 221 KEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
++ F P+GTITS +VM DG+S+GFGFV + SPE A KAV NG+ V K LYV AQ+
Sbjct: 304 RKEFAPFGTITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQR 363
Query: 281 KAERTQELKRRF 292
K +R L ++
Sbjct: 364 KEDRKAHLTSQY 375
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 122/229 (53%), Gaps = 18/229 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L I +++ FS G +LS +V +D S GY +V+F+ A +++
Sbjct: 1 MASLYVGDLHSDITEAMLFEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPSDAERAL 60
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N ++ + + I +R+ L + NV+IKN + +++ + + F +G
Sbjct: 61 DTMNFDMIKGRPI----RIMWSQRDPSLRKSG--VGNVFIKNLDKAIDNKAMYDTFSAFG 114
Query: 229 TITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQE 287
I S +V ++ G S+G+GFV +E+ E A K+++ NG ++GK +YVGR + ER +E
Sbjct: 115 NILSCKVAQDENGASKGYGFVHFETEEAANKSIEKVNGMLLNGKKVYVGRFIPRKEREKE 174
Query: 288 LKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
L + ++ N+YVKN + DE LR F +G ITS K
Sbjct: 175 LGEKAKLF----------TNVYVKNFGEDFSDEMLRDMFEKYGRITSHK 213
>gi|389610655|dbj|BAM18939.1| polyA-binding protein [Papilio polytes]
Length = 611
Score = 449 bits (1156), Expect = e-124, Method: Compositional matrix adjust.
Identities = 222/276 (80%), Positives = 240/276 (86%), Gaps = 4/276 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERAL+ MNFD +KGRPIRIMWSQRDPSLRKSGVGNVFIKNLDK+I
Sbjct: 53 GYAYVNFQQP--ADAERALEGMNFDIIKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKTI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKAMYDTFSAFG+ILSCKVAQDE G SKGYGFVHFETEEAANKSIEKVNGMLLN K V+
Sbjct: 111 DNKAMYDTFSAFGNILSCKVAQDETGASKGYGFVHFETEEAANKSIEKVNGMLLNGKKVY 170
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGK 241
VG+FIPRKEREKELGEKAKLFTNVY+KNFGEDF+DE L+EMFE YG ITS++VM DG
Sbjct: 171 VGRFIPRKEREKELGEKAKLFTNVYVKNFGEDFSDEMLREMFEKYGRITSHKVMYKEDGS 230
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKE-VDGKILYVGRAQKKAERTQELKRRFEMLKIERL 300
SRGFGFVA+E P+ AE+A NGKE V+GK LYVGRAQKKAER +ELKR+FE LK ERL
Sbjct: 231 SRGFGFVAFEDPDAAERACMELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERL 290
Query: 301 NRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLYVKNLDD+IDDERLRKEF PFGTITSAK
Sbjct: 291 TRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAK 326
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 76/192 (39%), Positives = 116/192 (60%), Gaps = 11/192 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV++KN + ++ + + F +G I S KV E G+S+G+GFV FE +AA ++ ++
Sbjct: 193 NVYVKNFGEDFSDEMLREMFEKYGRITSHKVMYKEDGSSRGFGFVAFEDPDAAERACMEL 252
Query: 172 NGM-LLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKL 220
NG L+ K ++VG+ + ER+KEL K + N+Y+KN + +DE+L
Sbjct: 253 NGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERL 312
Query: 221 KEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
++ F P+GTITS +VM DG+S+GFGFV + SPE A KAV NG+ V K LYV AQ+
Sbjct: 313 RKEFAPFGTITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQR 372
Query: 281 KAERTQELKRRF 292
K +R L ++
Sbjct: 373 KEDRKAHLTSQY 384
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 125/237 (52%), Gaps = 18/237 (7%)
Query: 102 DPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFET 160
+P + ++++ +L I +++ FS G +LS +V +D S GY +V+F+
Sbjct: 2 NPGPPNYPMASLYVGDLHSDITEAMLFEKFSTAGPVLSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 161 EEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKL 220
A +++E +N ++ + + I +R+ L + NV+IKN + +++ +
Sbjct: 62 PADAERALEGMNFDIIKGRPI----RIMWSQRDPSLRKSG--VGNVFIKNLDKTIDNKAM 115
Query: 221 KEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQ 279
+ F +G I S +V ++ G S+G+GFV +E+ E A K+++ NG ++GK +YVGR
Sbjct: 116 YDTFSAFGNILSCKVAQDETGASKGYGFVHFETEEAANKSIEKVNGMLLNGKKVYVGRFI 175
Query: 280 KKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ ER +EL + ++ N+YVKN + DE LR+ F +G ITS K
Sbjct: 176 PRKEREKELGEKAKLF----------TNVYVKNFGEDFSDEMLREMFEKYGRITSHK 222
>gi|389608229|dbj|BAM17726.1| polyA-binding protein [Papilio xuthus]
Length = 619
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 221/276 (80%), Positives = 240/276 (86%), Gaps = 4/276 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERAL+ MNFD +KGRPIRIMWSQRDPSLRKSGVGNVFIKNLDK+I
Sbjct: 53 GYAYVNFQQP--ADAERALEGMNFDIIKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKTI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKAMYDTF+AFG+ILSCKVAQDE G SKGYGFVHFETEEAANKSIEKVNGMLLN K V+
Sbjct: 111 DNKAMYDTFTAFGNILSCKVAQDETGASKGYGFVHFETEEAANKSIEKVNGMLLNGKKVY 170
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGK 241
VG+FIPRKEREKELGEKAKLFTNVY+KNFGEDF+DE L+EMFE YG ITS++VM DG
Sbjct: 171 VGRFIPRKEREKELGEKAKLFTNVYVKNFGEDFSDEMLREMFEKYGRITSHKVMYKEDGS 230
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKE-VDGKILYVGRAQKKAERTQELKRRFEMLKIERL 300
SRGFGFVA+E P+ AE+A NGKE V+GK LYVGRAQKKAER +ELKR+FE LK ERL
Sbjct: 231 SRGFGFVAFEDPDAAERACMELNGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERL 290
Query: 301 NRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLYVKNLDD+IDDERLRKEF PFGTITSAK
Sbjct: 291 TRYQGVNLYVKNLDDTIDDERLRKEFAPFGTITSAK 326
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 76/192 (39%), Positives = 116/192 (60%), Gaps = 11/192 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV++KN + ++ + + F +G I S KV E G+S+G+GFV FE +AA ++ ++
Sbjct: 193 NVYVKNFGEDFSDEMLREMFEKYGRITSHKVMYKEDGSSRGFGFVAFEDPDAAERACMEL 252
Query: 172 NGM-LLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKL 220
NG L+ K ++VG+ + ER+KEL K + N+Y+KN + +DE+L
Sbjct: 253 NGKELVEGKPLYVGRAQKKAERQKELKRKFEQLKSERLTRYQGVNLYVKNLDDTIDDERL 312
Query: 221 KEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
++ F P+GTITS +VM DG+S+GFGFV + SPE A KAV NG+ V K LYV AQ+
Sbjct: 313 RKEFAPFGTITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQR 372
Query: 281 KAERTQELKRRF 292
K +R L ++
Sbjct: 373 KEDRKAHLTSQY 384
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 125/237 (52%), Gaps = 18/237 (7%)
Query: 102 DPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFET 160
+P + ++++ +L I +++ FS G +LS +V +D S GY +V+F+
Sbjct: 2 NPGPPNYPMASLYVGDLHSDITEAMLFEKFSTAGPVLSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 161 EEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKL 220
A +++E +N ++ + + I +R+ L + NV+IKN + +++ +
Sbjct: 62 PADAERALEGMNFDIIKGRPI----RIMWSQRDPSLRKSG--VGNVFIKNLDKTIDNKAM 115
Query: 221 KEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQ 279
+ F +G I S +V ++ G S+G+GFV +E+ E A K+++ NG ++GK +YVGR
Sbjct: 116 YDTFTAFGNILSCKVAQDETGASKGYGFVHFETEEAANKSIEKVNGMLLNGKKVYVGRFI 175
Query: 280 KKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ ER +EL + ++ N+YVKN + DE LR+ F +G ITS K
Sbjct: 176 PRKEREKELGEKAKLF----------TNVYVKNFGEDFSDEMLREMFEKYGRITSHK 222
>gi|318087106|gb|ADV40145.1| putative apoptosis-promoting RNA-binding protein TIA-1/TIAR
[Latrodectus hesperus]
Length = 332
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 214/275 (77%), Positives = 241/275 (87%), Gaps = 3/275 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP +D ERALDTMNFD +KGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI
Sbjct: 35 GYAYVNFQQP--VDAERALDTMNFDMVKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 92
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKAMYDTFSAFG+ILSCKVA DE+ NSKGYGFVHFETEEAAN +I+KVNGMLLN + VF
Sbjct: 93 DNKAMYDTFSAFGNILSCKVATDEESNSKGYGFVHFETEEAANNAIQKVNGMLLNGRKVF 152
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GK 241
VGKF+PR EREK+LG+KA+ F NVYIKNFG+D +DEKL+EMFE YG ITS +VM ++ GK
Sbjct: 153 VGKFVPRSEREKQLGQKARRFMNVYIKNFGDDLDDEKLREMFEKYGKITSAKVMADETGK 212
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
+GFGFV++E PE AEKAV N KE++GK+LYVGRAQKK+ER ELKRRFE LK++R+N
Sbjct: 213 PKGFGFVSFEDPENAEKAVNDLNNKELNGKVLYVGRAQKKSERAAELKRRFEQLKMDRIN 272
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK
Sbjct: 273 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 307
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 62/158 (39%), Positives = 96/158 (60%), Gaps = 11/158 (6%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV+IKN +D++ + + F +G I S KV DE G KG+GFV FE E A K++ +
Sbjct: 175 NVYIKNFGDDLDDEKLREMFEKYGKITSAKVMADETGKPKGFGFVSFEDPENAEKAVNDL 234
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKLK 221
N LN K+++VG+ + ER EL + + N+Y+KN + +DE+L+
Sbjct: 235 NNKELNGKVLYVGRAQKKSERAAELKRRFEQLKMDRINRYQGVNLYVKNLDDSIDDERLR 294
Query: 222 EMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPEFAEK 258
+ F P+GTITS +VM +++G+S+GFGFV + +PE A K
Sbjct: 295 KEFTPFGTITSAKVMTDSNGRSKGFGFVCFSAPEEATK 332
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 120/215 (55%), Gaps = 24/215 (11%)
Query: 127 MYDTFSAFGSILSCKVAQDEQG-NSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGK 185
+++ FS+ G +LS +V +D S GY +V+F+ A ++++ +N ++ + +
Sbjct: 9 LFEKFSSAGPVLSIRVCRDLIARRSLGYAYVNFQQPVDAERALDTMNFDMVKGRPI---- 64
Query: 186 FIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGKSRG 244
I +R+ L + NV+IKN + +++ + + F +G I S +V + + S+G
Sbjct: 65 RIMWSQRDPSLRKSG--VGNVFIKNLDKSIDNKAMYDTFSAFGNILSCKVATDEESNSKG 122
Query: 245 FGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL---KRRFEMLKIERLN 301
+GFV +E+ E A A+Q NG ++G+ ++VG+ ++ER ++L RRF
Sbjct: 123 YGFVHFETEEAANNAIQKVNGMLLNGRKVFVGKFVPRSEREKQLGQKARRF--------- 173
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+N+Y+KN D +DDE+LR+ F +G ITSAK
Sbjct: 174 ----MNVYIKNFGDDLDDEKLREMFEKYGKITSAK 204
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 56/108 (51%), Gaps = 18/108 (16%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQR-----------------DPSLRKSGVGNVFIKNL 118
+ E+A++ +N L G+ + + +Q+ D R GV N+++KNL
Sbjct: 226 NAEKAVNDLNNKELNGKVLYVGRAQKKSERAAELKRRFEQLKMDRINRYQGV-NLYVKNL 284
Query: 119 DKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANK 166
D SID++ + F+ FG+I S KV D G SKG+GFV F E A K
Sbjct: 285 DDSIDDERLRKEFTPFGTITSAKVMTDSNGRSKGFGFVCFSAPEEATK 332
>gi|195123564|ref|XP_002006275.1| GI18654 [Drosophila mojavensis]
gi|193911343|gb|EDW10210.1| GI18654 [Drosophila mojavensis]
Length = 645
Score = 432 bits (1112), Expect = e-119, Method: Compositional matrix adjust.
Identities = 216/276 (78%), Positives = 238/276 (86%), Gaps = 4/276 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD ++ +PIRIMWSQRDPSLR+SGVGNVFIKNLDK+I
Sbjct: 44 GYAYVNFQQP--ADAERALDTMNFDLIRDKPIRIMWSQRDPSLRRSGVGNVFIKNLDKAI 101
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFSAFG+ILSCKVA DE+G SKGYGFVHFETEEAAN SI+KVNGMLLN K V+
Sbjct: 102 DNKAIYDTFSAFGNILSCKVATDEKGTSKGYGFVHFETEEAANTSIDKVNGMLLNGKKVY 161
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGK 241
VGKFIPRKEREKELGEKAKLFTNVY+KNF EDF+DEKLKE FEPYG ITSY+VM+ DGK
Sbjct: 162 VGKFIPRKEREKELGEKAKLFTNVYVKNFTEDFDDEKLKEFFEPYGKITSYKVMSKEDGK 221
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEV-DGKILYVGRAQKKAERTQELKRRFEMLKIERL 300
S+GFGFVAYE+ E AE AVQA NGK++ DGK LYV RAQKKAER QELKR+FE LK +R
Sbjct: 222 SKGFGFVAYETTEAAEAAVQALNGKDMGDGKTLYVARAQKKAERQQELKRKFEELKKKRH 281
Query: 301 NRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
GVNLYVKNLDDSIDDERLRKEF+ +GTITSAK
Sbjct: 282 ESVFGVNLYVKNLDDSIDDERLRKEFSLYGTITSAK 317
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 73/193 (37%), Positives = 114/193 (59%), Gaps = 12/193 (6%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV++KN + D++ + + F +G I S KV E G SKG+GFV +ET EAA +++ +
Sbjct: 184 NVYVKNFTEDFDDEKLKEFFEPYGKITSYKVMSKEDGKSKGFGFVAYETTEAAEAAVQAL 243
Query: 172 NGM-LLNSKIVFVGKFIPRKEREKELGEK----------AKLFTNVYIKNFGEDFNDEKL 220
NG + + K ++V + + ER++EL K + N+Y+KN + +DE+L
Sbjct: 244 NGKDMGDGKTLYVARAQKKAERQQELKRKFEELKKKRHESVFGVNLYVKNLDDSIDDERL 303
Query: 221 KEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQ 279
++ F YGTITS +VM ++ G+S+GFGFV + SP A AV NG+ + K LYV AQ
Sbjct: 304 RKEFSLYGTITSAKVMTDEEGRSKGFGFVCFISPNEATCAVTELNGRVIGSKPLYVALAQ 363
Query: 280 KKAERTQELKRRF 292
+K ER L ++
Sbjct: 364 RKEERKAHLASQY 376
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 126/229 (55%), Gaps = 18/229 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQD-EQGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + I+ +++ FS+ G +LS +V +D S GY +V+F+ A +++
Sbjct: 1 MASLYVGDLHQDINEAGLFEKFSSAGPVLSIRVCRDVVTRRSLGYAYVNFQQPADAERAL 60
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N L+ K + I +R+ L NV+IKN + +++ + + F +G
Sbjct: 61 DTMNFDLIRDKPI----RIMWSQRDPSLRRSG--VGNVFIKNLDKAIDNKAIYDTFSAFG 114
Query: 229 TITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQE 287
I S +V ++ G S+G+GFV +E+ E A ++ NG ++GK +YVG+ + ER +E
Sbjct: 115 NILSCKVATDEKGTSKGYGFVHFETEEAANTSIDKVNGMLLNGKKVYVGKFIPRKEREKE 174
Query: 288 LKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
L + ++ N+YVKN + DDE+L++ F P+G ITS K
Sbjct: 175 LGEKAKLF----------TNVYVKNFTEDFDDEKLKEFFEPYGKITSYK 213
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 68/119 (57%), Gaps = 1/119 (0%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
N+++KNLD SID++ + FS +G+I S KV DE+G SKG+GFV F + A ++ ++
Sbjct: 288 NLYVKNLDDSIDDERLRKEFSLYGTITSAKVMTDEEGRSKGFGFVCFISPNEATCAVTEL 347
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEK-AKLFTNVYIKNFGEDFNDEKLKEMFEPYGT 229
NG ++ SK ++V ++ER+ L + + T + ++ G+ F F P T
Sbjct: 348 NGRVIGSKPLYVALAQRKEERKAHLASQYMRHMTGMRMQQLGQLFPPNTAGGFFVPTMT 406
>gi|194753367|ref|XP_001958985.1| GF12652 [Drosophila ananassae]
gi|190620283|gb|EDV35807.1| GF12652 [Drosophila ananassae]
Length = 639
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 215/276 (77%), Positives = 239/276 (86%), Gaps = 4/276 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD L+ +PIRIMWSQRDPSLR+SGVGNVFIKNLDK+I
Sbjct: 44 GYAYVNFQQP--ADAERALDTMNFDLLRNKPIRIMWSQRDPSLRRSGVGNVFIKNLDKTI 101
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFSAFG+ILSCKVA DE+ NSKGYGFVHFETEEAAN SI+KVNGMLLN K V+
Sbjct: 102 DNKAIYDTFSAFGNILSCKVATDEKANSKGYGFVHFETEEAANTSIDKVNGMLLNGKKVY 161
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGK 241
VGKFIPRKEREKELGEKAKLFTNVY+KNF EDF+DEKLKE FEPYG ITSY+VM+ DGK
Sbjct: 162 VGKFIPRKEREKELGEKAKLFTNVYVKNFTEDFDDEKLKEFFEPYGKITSYKVMSKEDGK 221
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEV-DGKILYVGRAQKKAERTQELKRRFEMLKIERL 300
S+GFGFVA+E+ E AE AVQA NGK++ +GK LYV RAQKKAER QELKR+FE LK +R
Sbjct: 222 SKGFGFVAFETTEAAEAAVQALNGKDMGEGKSLYVARAQKKAERQQELKRKFEELKKKRH 281
Query: 301 NRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ GVNLYVKNLDDSIDDERL KEF+P+GTITSAK
Sbjct: 282 DSAFGVNLYVKNLDDSIDDERLCKEFSPYGTITSAK 317
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 75/193 (38%), Positives = 112/193 (58%), Gaps = 12/193 (6%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV++KN + D++ + + F +G I S KV E G SKG+GFV FET EAA +++ +
Sbjct: 184 NVYVKNFTEDFDDEKLKEFFEPYGKITSYKVMSKEDGKSKGFGFVAFETTEAAEAAVQAL 243
Query: 172 NGM-LLNSKIVFVGKFIPRKEREKELGEK----------AKLFTNVYIKNFGEDFNDEKL 220
NG + K ++V + + ER++EL K + N+Y+KN + +DE+L
Sbjct: 244 NGKDMGEGKSLYVARAQKKAERQQELKRKFEELKKKRHDSAFGVNLYVKNLDDSIDDERL 303
Query: 221 KEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQ 279
+ F PYGTITS +VM ++ G+S+GFGFV + S A AV NG+ V K LYV AQ
Sbjct: 304 CKEFSPYGTITSAKVMTDEEGRSKGFGFVCFISANEATCAVTELNGRVVGSKPLYVALAQ 363
Query: 280 KKAERTQELKRRF 292
+K ER L ++
Sbjct: 364 RKEERKAHLASQY 376
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 126/229 (55%), Gaps = 18/229 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQG-NSKGYGFVHFETEEAANKSI 168
+ ++++ +L + I+ ++D FS+ G +LS +V +D S GY +V+F+ A +++
Sbjct: 1 MASLYVGDLHQDINESNLFDKFSSAGPVLSIRVCRDVMSRRSLGYAYVNFQQPADAERAL 60
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N LL +K + I +R+ L NV+IKN + +++ + + F +G
Sbjct: 61 DTMNFDLLRNKPI----RIMWSQRDPSLRRSG--VGNVFIKNLDKTIDNKAIYDTFSAFG 114
Query: 229 TITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQE 287
I S +V ++ S+G+GFV +E+ E A ++ NG ++GK +YVG+ + ER +E
Sbjct: 115 NILSCKVATDEKANSKGYGFVHFETEEAANTSIDKVNGMLLNGKKVYVGKFIPRKEREKE 174
Query: 288 LKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
L + ++ N+YVKN + DDE+L++ F P+G ITS K
Sbjct: 175 LGEKAKLF----------TNVYVKNFTEDFDDEKLKEFFEPYGKITSYK 213
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 67/116 (57%), Gaps = 1/116 (0%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
N+++KNLD SID++ + FS +G+I S KV DE+G SKG+GFV F + A ++ ++
Sbjct: 288 NLYVKNLDDSIDDERLCKEFSPYGTITSAKVMTDEEGRSKGFGFVCFISANEATCAVTEL 347
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEK-AKLFTNVYIKNFGEDFNDEKLKEMFEP 226
NG ++ SK ++V ++ER+ L + + T + ++ G+ F F P
Sbjct: 348 NGRVVGSKPLYVALAQRKEERKAHLASQYMRHMTGMRMQQLGQIFPPNAAGGFFVP 403
>gi|195381687|ref|XP_002049579.1| GJ21671 [Drosophila virilis]
gi|194144376|gb|EDW60772.1| GJ21671 [Drosophila virilis]
Length = 645
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 215/276 (77%), Positives = 239/276 (86%), Gaps = 4/276 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD ++ +PIRIMWSQRDPSLR+SGVGNVFIKNLDK+I
Sbjct: 44 GYAYVNFQQP--ADAERALDTMNFDLIRNKPIRIMWSQRDPSLRRSGVGNVFIKNLDKAI 101
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFSAFG+ILSCKVA DE+GNSKGYGFVHFETEEAAN SI+KVNGMLLN K V+
Sbjct: 102 DNKAIYDTFSAFGNILSCKVATDEKGNSKGYGFVHFETEEAANTSIDKVNGMLLNGKKVY 161
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGK 241
VGKFIPRKEREKELGEKAKLFTNVY+KNF E+F+DEKLKE FEPYG ITSY+VM+ DGK
Sbjct: 162 VGKFIPRKEREKELGEKAKLFTNVYVKNFTEEFDDEKLKEFFEPYGKITSYKVMSKEDGK 221
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEV-DGKILYVGRAQKKAERTQELKRRFEMLKIERL 300
S+GFGFVAYE+ E AE AVQA NGK++ +GK LYV RAQKKAER QELKR+FE LK +R
Sbjct: 222 SKGFGFVAYETTEAAEAAVQALNGKDMGEGKSLYVARAQKKAERQQELKRKFEELKKKRH 281
Query: 301 NRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
GVNLYVKNLDDSIDDERLRKEF+ +GTITSAK
Sbjct: 282 ESVFGVNLYVKNLDDSIDDERLRKEFSLYGTITSAK 317
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 75/193 (38%), Positives = 113/193 (58%), Gaps = 12/193 (6%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV++KN + D++ + + F +G I S KV E G SKG+GFV +ET EAA +++ +
Sbjct: 184 NVYVKNFTEEFDDEKLKEFFEPYGKITSYKVMSKEDGKSKGFGFVAYETTEAAEAAVQAL 243
Query: 172 NGM-LLNSKIVFVGKFIPRKEREKELGEK----------AKLFTNVYIKNFGEDFNDEKL 220
NG + K ++V + + ER++EL K + N+Y+KN + +DE+L
Sbjct: 244 NGKDMGEGKSLYVARAQKKAERQQELKRKFEELKKKRHESVFGVNLYVKNLDDSIDDERL 303
Query: 221 KEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQ 279
++ F YGTITS +VM +D G+S+GFGFV + SP A AV NG+ V K LYV AQ
Sbjct: 304 RKEFSLYGTITSAKVMTDDEGRSKGFGFVCFISPNEATCAVTELNGRVVGSKPLYVALAQ 363
Query: 280 KKAERTQELKRRF 292
+K ER L ++
Sbjct: 364 RKEERKAHLASQY 376
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 126/229 (55%), Gaps = 18/229 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + I+ +++ FS G +LS +V +D S GY +V+F+ A +++
Sbjct: 1 MASLYVGDLHQDINEAGLFEKFSTAGPVLSIRVCRDVVTRRSLGYAYVNFQQPADAERAL 60
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N L+ +K + I +R+ L NV+IKN + +++ + + F +G
Sbjct: 61 DTMNFDLIRNKPI----RIMWSQRDPSLRRSG--VGNVFIKNLDKAIDNKAIYDTFSAFG 114
Query: 229 TITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQE 287
I S +V ++ G S+G+GFV +E+ E A ++ NG ++GK +YVG+ + ER +E
Sbjct: 115 NILSCKVATDEKGNSKGYGFVHFETEEAANTSIDKVNGMLLNGKKVYVGKFIPRKEREKE 174
Query: 288 LKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
L + ++ N+YVKN + DDE+L++ F P+G ITS K
Sbjct: 175 LGEKAKLF----------TNVYVKNFTEEFDDEKLKEFFEPYGKITSYK 213
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 67/116 (57%), Gaps = 1/116 (0%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
N+++KNLD SID++ + FS +G+I S KV D++G SKG+GFV F + A ++ ++
Sbjct: 288 NLYVKNLDDSIDDERLRKEFSLYGTITSAKVMTDDEGRSKGFGFVCFISPNEATCAVTEL 347
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEK-AKLFTNVYIKNFGEDFNDEKLKEMFEP 226
NG ++ SK ++V ++ER+ L + + T + ++ G+ F F P
Sbjct: 348 NGRVVGSKPLYVALAQRKEERKAHLASQYMRHMTGMRMQQLGQLFQPNTASGFFVP 403
>gi|321466794|gb|EFX77787.1| polyadenylate binding protein, cytoplasmic 1 [Daphnia pulex]
Length = 574
Score = 429 bits (1103), Expect = e-117, Method: Compositional matrix adjust.
Identities = 205/275 (74%), Positives = 237/275 (86%), Gaps = 3/275 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALD+MNFD L+GRPIRIMWSQRDPSLR+SGVGN+FIKNLDK+I
Sbjct: 54 GYAYVNFQQP--ADAERALDSMNFDVLRGRPIRIMWSQRDPSLRRSGVGNIFIKNLDKTI 111
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKAMYDTFSAFG+ILSCKVAQDE GNSKGYGFVHFETEE+A +I KVNGMLLN K VF
Sbjct: 112 DNKAMYDTFSAFGNILSCKVAQDEAGNSKGYGFVHFETEESAVNAITKVNGMLLNGKKVF 171
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGK 241
VG+FIPRK+RE+ELGEKAK FTNVYIKNFG++F+DEKL E F YG +TS++VM ++DGK
Sbjct: 172 VGRFIPRKDRERELGEKAKYFTNVYIKNFGDEFDDEKLFECFSKYGKVTSHKVMSSDDGK 231
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
SRGFGFV YE P+ AE+A + K+++GK L+VGRAQK+ ER EL+R+FE +KIERLN
Sbjct: 232 SRGFGFVCYEDPDAAERACDDMHAKDMNGKTLFVGRAQKRNERQTELRRKFEQMKIERLN 291
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLYVKNLDD+IDDERLRKEF P+GTITSAK
Sbjct: 292 RYQGVNLYVKNLDDTIDDERLRKEFAPYGTITSAK 326
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 73/192 (38%), Positives = 115/192 (59%), Gaps = 11/192 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV+IKN D++ +++ FS +G + S KV + G S+G+GFV +E +AA ++ + +
Sbjct: 194 NVYIKNFGDEFDDEKLFECFSKYGKVTSHKVMSSDDGKSRGFGFVCYEDPDAAERACDDM 253
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKLK 221
+ +N K +FVG+ R ER+ EL K + N+Y+KN + +DE+L+
Sbjct: 254 HAKDMNGKTLFVGRAQKRNERQTELRRKFEQMKIERLNRYQGVNLYVKNLDDTIDDERLR 313
Query: 222 EMFEPYGTITSYRVMNNDGKSR-GFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
+ F PYGTITS +VM G+++ GFGFV + SPE A KAV NG+ + K LYV AQ+
Sbjct: 314 KEFAPYGTITSAKVMTEGGRNKGGFGFVCFSSPEEATKAVTEMNGRILVSKPLYVALAQR 373
Query: 281 KAERTQELKRRF 292
K +R +L ++
Sbjct: 374 KEDRKAQLASQY 385
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 121/229 (52%), Gaps = 18/229 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + +++ FS G ++S +V +D S GY +V+F+ A +++
Sbjct: 11 IASLYVGDLHNEVTEAMLFEKFSTAGPVVSIRVCRDMITRRSLGYAYVNFQQPADAERAL 70
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N +L + + I +R+ L N++IKN + +++ + + F +G
Sbjct: 71 DSMNFDVLRGRPI----RIMWSQRDPSLRRSG--VGNIFIKNLDKTIDNKAMYDTFSAFG 124
Query: 229 TITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQE 287
I S +V ++ G S+G+GFV +E+ E A A+ NG ++GK ++VGR + +R +E
Sbjct: 125 NILSCKVAQDEAGNSKGYGFVHFETEESAVNAITKVNGMLLNGKKVFVGRFIPRKDRERE 184
Query: 288 LKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
L + + N+Y+KN D DDE+L + F+ +G +TS K
Sbjct: 185 LGEKAKYF----------TNVYIKNFGDEFDDEKLFECFSKYGKVTSHK 223
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 87/169 (51%), Gaps = 26/169 (15%)
Query: 77 TERALDTMNFDALKGRPIRIMWSQ----RDPSLRK-------------SGVGNVFIKNLD 119
ERA D M+ + G+ + + +Q R LR+ GV N+++KNLD
Sbjct: 246 AERACDDMHAKDMNGKTLFVGRAQKRNERQTELRRKFEQMKIERLNRYQGV-NLYVKNLD 304
Query: 120 KSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSK 179
+ID++ + F+ +G+I S KV + N G+GFV F + E A K++ ++NG +L SK
Sbjct: 305 DTIDDERLRKEFAPYGTITSAKVMTEGGRNKGGFGFVCFSSPEEATKAVTEMNGRILVSK 364
Query: 180 IVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
++V +++R+ +L + Y++ +++ +MF+P G
Sbjct: 365 PLYVALAQRKEDRKAQLASQ-------YMQRMA-GMRMQQMGQMFQPGG 405
>gi|328713207|ref|XP_001947071.2| PREDICTED: polyadenylate-binding protein 1-like [Acyrthosiphon
pisum]
Length = 630
Score = 428 bits (1101), Expect = e-117, Method: Compositional matrix adjust.
Identities = 209/265 (78%), Positives = 234/265 (88%), Gaps = 2/265 (0%)
Query: 74 MLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSA 133
M D ERALDTMNFD LKGRP+RIMWSQRDPSLRKSGVGNVFIKNLD+SIDNKAMYDTFSA
Sbjct: 53 MADAERALDTMNFDILKGRPMRIMWSQRDPSLRKSGVGNVFIKNLDRSIDNKAMYDTFSA 112
Query: 134 FGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKERE 193
FG+ILSCKVAQDE G SKGYGFVHFE E++A +SIEKVNGMLLN K VFVG+F+ RK+RE
Sbjct: 113 FGNILSCKVAQDETGQSKGYGFVHFEMEQSATQSIEKVNGMLLNGKKVFVGRFVGRKDRE 172
Query: 194 KELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYES 252
KELG+KAKL+TNVYIKN E+ ND++L EMFE YG+ITS++VM +DG SRGFGFVA+E
Sbjct: 173 KELGQKAKLYTNVYIKNIDENVNDKELFEMFEKYGSITSFKVMFRDDGSSRGFGFVAFED 232
Query: 253 PEFAEKAVQAWNGKE-VDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVK 311
PE AEKAV +GKE +GK YVGRAQKKAER QELKR+FE KIER+NRYQGVNLYVK
Sbjct: 233 PEEAEKAVTELHGKESPEGKTYYVGRAQKKAERQQELKRKFEQYKIERMNRYQGVNLYVK 292
Query: 312 NLDDSIDDERLRKEFTPFGTITSAK 336
NLDD+IDDERLRKEF+ FGTITSAK
Sbjct: 293 NLDDTIDDERLRKEFSVFGTITSAK 317
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 76/192 (39%), Positives = 121/192 (63%), Gaps = 11/192 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV+IKN+D+++++K +++ F +GSI S KV + G+S+G+GFV FE E A K++ ++
Sbjct: 184 NVYIKNIDENVNDKELFEMFEKYGSITSFKVMFRDDGSSRGFGFVAFEDPEEAEKAVTEL 243
Query: 172 NGM-LLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKL 220
+G K +VG+ + ER++EL K + + N+Y+KN + +DE+L
Sbjct: 244 HGKESPEGKTYYVGRAQKKAERQQELKRKFEQYKIERMNRYQGVNLYVKNLDDTIDDERL 303
Query: 221 KEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
++ F +GTITS +VM +DG+S+GFGFV + SPE A KAV NG+ V K LYV AQ+
Sbjct: 304 RKEFSVFGTITSAKVMMDDGRSKGFGFVCFSSPEEATKAVTDMNGRIVGTKPLYVALAQR 363
Query: 281 KAERTQELKRRF 292
K +R L ++
Sbjct: 364 KEDRKAHLDSQY 375
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 129/229 (56%), Gaps = 18/229 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + +++ FS G++LS +V +D S GY +V+F+ A +++
Sbjct: 1 MASLYVGDLHSDVTEAMLFEKFSTVGAVLSIRVCRDMITRRSLGYAYVNFQNMADAERAL 60
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N +L + + I +R+ L + NV+IKN +++ + + F +G
Sbjct: 61 DTMNFDILKGRPM----RIMWSQRDPSLRKSG--VGNVFIKNLDRSIDNKAMYDTFSAFG 114
Query: 229 TITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQE 287
I S +V ++ G+S+G+GFV +E + A ++++ NG ++GK ++VGR + +R +E
Sbjct: 115 NILSCKVAQDETGQSKGYGFVHFEMEQSATQSIEKVNGMLLNGKKVFVGRFVGRKDREKE 174
Query: 288 LKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
L ++ ++ N+Y+KN+D++++D+ L + F +G+ITS K
Sbjct: 175 LGQKAKLY----------TNVYIKNIDENVNDKELFEMFEKYGSITSFK 213
>gi|195024447|ref|XP_001985876.1| GH21052 [Drosophila grimshawi]
gi|193901876|gb|EDW00743.1| GH21052 [Drosophila grimshawi]
Length = 645
Score = 428 bits (1100), Expect = e-117, Method: Compositional matrix adjust.
Identities = 214/276 (77%), Positives = 240/276 (86%), Gaps = 4/276 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD ++ +PIRIMWSQRDPSLR+SGVGNVFIKNLDK+I
Sbjct: 44 GYAYVNFQQP--ADAERALDTMNFDLVRNKPIRIMWSQRDPSLRRSGVGNVFIKNLDKAI 101
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFSAFG+ILSCKVA DE+G+SKGYGFVHFETEEAAN SI+KVNGMLLN K V+
Sbjct: 102 DNKAIYDTFSAFGNILSCKVATDEKGHSKGYGFVHFETEEAANTSIDKVNGMLLNGKKVY 161
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMN-NDGK 241
VGKFIPRKEREKELGEKAKLFTNVYIKNF ++F+DEKLKE FEPYG ITSY+VM+ +DGK
Sbjct: 162 VGKFIPRKEREKELGEKAKLFTNVYIKNFTDEFDDEKLKENFEPYGKITSYKVMSKDDGK 221
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEV-DGKILYVGRAQKKAERTQELKRRFEMLKIERL 300
S+GFGFVAYE+ E AE AVQA NGK++ +GK LYV RAQKKAER QELKR+FE LK +R
Sbjct: 222 SKGFGFVAYETTEAAEAAVQALNGKDMGEGKTLYVARAQKKAERQQELKRKFEELKKKRH 281
Query: 301 NRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
GVNLYVKNLDDSIDDERLRKEF+ +GTITSAK
Sbjct: 282 ESVFGVNLYVKNLDDSIDDERLRKEFSLYGTITSAK 317
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 74/193 (38%), Positives = 112/193 (58%), Gaps = 12/193 (6%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV+IKN D++ + + F +G I S KV + G SKG+GFV +ET EAA +++ +
Sbjct: 184 NVYIKNFTDEFDDEKLKENFEPYGKITSYKVMSKDDGKSKGFGFVAYETTEAAEAAVQAL 243
Query: 172 NGM-LLNSKIVFVGKFIPRKEREKELGEK----------AKLFTNVYIKNFGEDFNDEKL 220
NG + K ++V + + ER++EL K + N+Y+KN + +DE+L
Sbjct: 244 NGKDMGEGKTLYVARAQKKAERQQELKRKFEELKKKRHESVFGVNLYVKNLDDSIDDERL 303
Query: 221 KEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQ 279
++ F YGTITS +VM ++ G+S+GFGFV + SP A AV NG+ V K LYV AQ
Sbjct: 304 RKEFSLYGTITSAKVMTDEEGRSKGFGFVCFISPNEATCAVTELNGRVVGSKPLYVALAQ 363
Query: 280 KKAERTQELKRRF 292
+K ER L ++
Sbjct: 364 RKEERKAHLASQY 376
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 126/229 (55%), Gaps = 18/229 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + I+ +++ FS G +LS +V +D S GY +V+F+ A +++
Sbjct: 1 MASLYVGDLHQDINEAGLFEKFSTAGPVLSIRVCRDVVTRRSLGYAYVNFQQPADAERAL 60
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N L+ +K + I +R+ L NV+IKN + +++ + + F +G
Sbjct: 61 DTMNFDLVRNKPI----RIMWSQRDPSLRRSG--VGNVFIKNLDKAIDNKAIYDTFSAFG 114
Query: 229 TITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQE 287
I S +V ++ G S+G+GFV +E+ E A ++ NG ++GK +YVG+ + ER +E
Sbjct: 115 NILSCKVATDEKGHSKGYGFVHFETEEAANTSIDKVNGMLLNGKKVYVGKFIPRKEREKE 174
Query: 288 LKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
L + ++ N+Y+KN D DDE+L++ F P+G ITS K
Sbjct: 175 LGEKAKLF----------TNVYIKNFTDEFDDEKLKENFEPYGKITSYK 213
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 67/116 (57%), Gaps = 1/116 (0%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
N+++KNLD SID++ + FS +G+I S KV DE+G SKG+GFV F + A ++ ++
Sbjct: 288 NLYVKNLDDSIDDERLRKEFSLYGTITSAKVMTDEEGRSKGFGFVCFISPNEATCAVTEL 347
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEK-AKLFTNVYIKNFGEDFNDEKLKEMFEP 226
NG ++ SK ++V ++ER+ L + + T + ++ G+ F F P
Sbjct: 348 NGRVVGSKPLYVALAQRKEERKAHLASQYMRHMTGMRMQQLGQLFQPNAASGFFVP 403
>gi|241831489|ref|XP_002414860.1| apoptosis-promoting RNA-binding protein TIA-1/TIAR, putative
[Ixodes scapularis]
gi|215509072|gb|EEC18525.1| apoptosis-promoting RNA-binding protein TIA-1/TIAR, putative
[Ixodes scapularis]
Length = 686
Score = 426 bits (1095), Expect = e-117, Method: Compositional matrix adjust.
Identities = 207/275 (75%), Positives = 236/275 (85%), Gaps = 3/275 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFDA+K +PIRIMWSQRDPSLRKSGVGNVFIKNLDK+I
Sbjct: 53 GYAYVNFQQP--ADAERALDTMNFDAIKNKPIRIMWSQRDPSLRKSGVGNVFIKNLDKTI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKAMYDTFSAFG+ILSC+VA DE+ SKGYGFVHFETEEAANK+I KVNGMLLN+K V+
Sbjct: 111 DNKAMYDTFSAFGNILSCRVATDEEAASKGYGFVHFETEEAANKAISKVNGMLLNNKKVY 170
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GK 241
VGKFIPRKEREK LG+KA+ FTNVYIKNFG++ +D+KL +FE YG ITS +VM +D GK
Sbjct: 171 VGKFIPRKEREKMLGDKARCFTNVYIKNFGDELDDDKLLVIFEKYGKITSAKVMTDDSGK 230
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
+RGFGFV++E P+ AE+AV+ NGK++ G+ LYVGRAQKKAER ELKR FE LK ERLN
Sbjct: 231 NRGFGFVSFEEPDSAERAVEELNGKDMGGRPLYVGRAQKKAERQSELKRHFEQLKQERLN 290
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLYVKNLDD++DDERLRKEF PFG ITSAK
Sbjct: 291 RYQGVNLYVKNLDDALDDERLRKEFGPFGNITSAK 325
Score = 137 bits (345), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 71/192 (36%), Positives = 114/192 (59%), Gaps = 11/192 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV+IKN +D+ + F +G I S KV D+ G ++G+GFV FE ++A +++E++
Sbjct: 193 NVYIKNFGDELDDDKLLVIFEKYGKITSAKVMTDDSGKNRGFGFVSFEEPDSAERAVEEL 252
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKLK 221
NG + + ++VG+ + ER+ EL + N+Y+KN + +DE+L+
Sbjct: 253 NGKDMGGRPLYVGRAQKKAERQSELKRHFEQLKQERLNRYQGVNLYVKNLDDALDDERLR 312
Query: 222 EMFEPYGTITSYRVMNN-DGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
+ F P+G ITS +VM + +G+S+GFGFV + SPE A KAV NG+ V K LYV AQ+
Sbjct: 313 KEFGPFGNITSAKVMTDANGRSKGFGFVCFSSPEEATKAVTEMNGRIVVSKPLYVALAQR 372
Query: 281 KAERTQELKRRF 292
K +R L ++
Sbjct: 373 KEDRKAHLASQY 384
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 122/237 (51%), Gaps = 18/237 (7%)
Query: 102 DPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFET 160
+PS + ++++ +L + +++ FS G +LS +V +D S GY +V+F+
Sbjct: 2 NPSGPNYPMASLYVGDLHPEVTEAMLFEKFSTAGPVLSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 161 EEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKL 220
A ++++ +N + +K + I +R+ L + NV+IKN + +++ +
Sbjct: 62 PADAERALDTMNFDAIKNKPI----RIMWSQRDPSLRKSG--VGNVFIKNLDKTIDNKAM 115
Query: 221 KEMFEPYGTITSYRVMNN-DGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQ 279
+ F +G I S RV + + S+G+GFV +E+ E A KA+ NG ++ K +YVG+
Sbjct: 116 YDTFSAFGNILSCRVATDEEAASKGYGFVHFETEEAANKAISKVNGMLLNNKKVYVGKFI 175
Query: 280 KKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ ER + L + N+Y+KN D +DD++L F +G ITSAK
Sbjct: 176 PRKEREKMLGDKARCF----------TNVYIKNFGDELDDDKLLVIFEKYGKITSAK 222
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 103/211 (48%), Gaps = 31/211 (14%)
Query: 77 TERALDTMNFDALKGRPIRIMWSQ----RDPSLRK-------------SGVGNVFIKNLD 119
ERA++ +N + GRP+ + +Q R L++ GV N+++KNLD
Sbjct: 245 AERAVEELNGKDMGGRPLYVGRAQKKAERQSELKRHFEQLKQERLNRYQGV-NLYVKNLD 303
Query: 120 KSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSK 179
++D++ + F FG+I S KV D G SKG+GFV F + E A K++ ++NG ++ SK
Sbjct: 304 DALDDERLRKEFGPFGNITSAKVMTDANGRSKGFGFVCFSSPEEATKAVTEMNGRIVVSK 363
Query: 180 IVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGT-ITSYRV--M 236
++V RKE KA L + + G ++ +MF P GT + +Y V M
Sbjct: 364 PLYVA-LAQRKE-----DRKAHLASQYMHRIAGMRM---QMGQMFPPGGTGVANYFVPTM 414
Query: 237 NNDGKSRGFGFVAYESPEFAEKAVQAWNGKE 267
+ + F A P +A W G++
Sbjct: 415 PHHQTGQRSYFPAALGPA-QMRATPRWTGQQ 444
>gi|195429537|ref|XP_002062815.1| GK19652 [Drosophila willistoni]
gi|194158900|gb|EDW73801.1| GK19652 [Drosophila willistoni]
Length = 638
Score = 426 bits (1094), Expect = e-117, Method: Compositional matrix adjust.
Identities = 213/276 (77%), Positives = 238/276 (86%), Gaps = 4/276 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD ++ +PIRIMWSQRDPSLR+SGVGNVFIKNLD+ I
Sbjct: 44 GYAYVNFQQP--ADAERALDTMNFDLIRNKPIRIMWSQRDPSLRRSGVGNVFIKNLDRQI 101
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFSAFG+ILSCKVA DE+GNSKGYGFVHFETEEAAN SIEKVNGMLLN K V+
Sbjct: 102 DNKAIYDTFSAFGNILSCKVALDEKGNSKGYGFVHFETEEAANTSIEKVNGMLLNGKKVY 161
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGK 241
VGKFIPRKEREKELGEKAKLFTNVY+KNF E+F+DEKLK+ FEPYG ITSY+VM+ DGK
Sbjct: 162 VGKFIPRKEREKELGEKAKLFTNVYVKNFTEEFDDEKLKDFFEPYGKITSYKVMSKEDGK 221
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEV-DGKILYVGRAQKKAERTQELKRRFEMLKIERL 300
S+GFGFVA+E+ E AE AVQA NGK++ +GK LYV RAQKKAER QELKR+FE LK +R
Sbjct: 222 SKGFGFVAFETTEAAEAAVQALNGKDMGEGKSLYVARAQKKAERQQELKRKFEELKKKRH 281
Query: 301 NRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
GVNLYVKNLDDSIDDERLRKEF+ +GTITSAK
Sbjct: 282 ESVFGVNLYVKNLDDSIDDERLRKEFSLYGTITSAK 317
Score = 133 bits (335), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 76/193 (39%), Positives = 113/193 (58%), Gaps = 12/193 (6%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV++KN + D++ + D F +G I S KV E G SKG+GFV FET EAA +++ +
Sbjct: 184 NVYVKNFTEEFDDEKLKDFFEPYGKITSYKVMSKEDGKSKGFGFVAFETTEAAEAAVQAL 243
Query: 172 NGM-LLNSKIVFVGKFIPRKEREKELGEK----------AKLFTNVYIKNFGEDFNDEKL 220
NG + K ++V + + ER++EL K + N+Y+KN + +DE+L
Sbjct: 244 NGKDMGEGKSLYVARAQKKAERQQELKRKFEELKKKRHESVFGVNLYVKNLDDSIDDERL 303
Query: 221 KEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQ 279
++ F YGTITS +VM ++ G+S+GFGFV + SP A AV NG+ V K LYV AQ
Sbjct: 304 RKEFSLYGTITSAKVMTDEEGRSKGFGFVCFISPNEATCAVTELNGRVVGSKPLYVALAQ 363
Query: 280 KKAERTQELKRRF 292
+K ER L ++
Sbjct: 364 RKEERKAHLASQY 376
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 126/229 (55%), Gaps = 18/229 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQD-EQGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + I+ +++ FS+ G +LS +V +D S GY +V+F+ A +++
Sbjct: 1 MASLYVGDLHQDINEAGLFEKFSSAGPVLSIRVCRDVVTRRSLGYAYVNFQQPADAERAL 60
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N L+ +K + I +R+ L NV+IKN +++ + + F +G
Sbjct: 61 DTMNFDLIRNKPI----RIMWSQRDPSLRRSG--VGNVFIKNLDRQIDNKAIYDTFSAFG 114
Query: 229 TITSYRV-MNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQE 287
I S +V ++ G S+G+GFV +E+ E A +++ NG ++GK +YVG+ + ER +E
Sbjct: 115 NILSCKVALDEKGNSKGYGFVHFETEEAANTSIEKVNGMLLNGKKVYVGKFIPRKEREKE 174
Query: 288 LKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
L + ++ N+YVKN + DDE+L+ F P+G ITS K
Sbjct: 175 LGEKAKLF----------TNVYVKNFTEEFDDEKLKDFFEPYGKITSYK 213
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 65/105 (61%), Gaps = 1/105 (0%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
N+++KNLD SID++ + FS +G+I S KV DE+G SKG+GFV F + A ++ ++
Sbjct: 288 NLYVKNLDDSIDDERLRKEFSLYGTITSAKVMTDEEGRSKGFGFVCFISPNEATCAVTEL 347
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEK-AKLFTNVYIKNFGEDF 215
NG ++ SK ++V ++ER+ L + + T + ++ G+ F
Sbjct: 348 NGRVVGSKPLYVALAQRKEERKAHLASQYMRHMTGMRMQQLGQIF 392
>gi|194880963|ref|XP_001974622.1| GG21846 [Drosophila erecta]
gi|190657809|gb|EDV55022.1| GG21846 [Drosophila erecta]
Length = 635
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 211/276 (76%), Positives = 237/276 (85%), Gaps = 4/276 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD L+ +PIRIMWSQRDPSLR+SGVGNVFIKNLD++I
Sbjct: 44 GYAYVNFQQP--ADAERALDTMNFDLLRNKPIRIMWSQRDPSLRRSGVGNVFIKNLDRAI 101
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFSAFG+ILSCKVA DE+GNSKGYGFVHFETEEAAN SI+KVNGMLLN K V+
Sbjct: 102 DNKAIYDTFSAFGNILSCKVATDEKGNSKGYGFVHFETEEAANTSIDKVNGMLLNGKKVY 161
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGK 241
VGKFIPRKEREKELGEKAKLFTNVY+KNF EDF+DEKLKE FEPYG ITSY+VM+ DGK
Sbjct: 162 VGKFIPRKEREKELGEKAKLFTNVYVKNFTEDFDDEKLKEFFEPYGKITSYKVMSKEDGK 221
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEV-DGKILYVGRAQKKAERTQELKRRFEMLKIERL 300
S+GFGFVA+E+ E AE AVQA NGK++ +GK LYV RAQKKAER QELKR+FE LK +R
Sbjct: 222 SKGFGFVAFETTEAAEAAVQALNGKDMGEGKSLYVARAQKKAERQQELKRKFEELKQKRH 281
Query: 301 NRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
GVNLYVKNLDD+IDD+RLR F+P+G ITSAK
Sbjct: 282 ESVFGVNLYVKNLDDTIDDDRLRIAFSPYGNITSAK 317
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 72/193 (37%), Positives = 111/193 (57%), Gaps = 12/193 (6%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV++KN + D++ + + F +G I S KV E G SKG+GFV FET EAA +++ +
Sbjct: 184 NVYVKNFTEDFDDEKLKEFFEPYGKITSYKVMSKEDGKSKGFGFVAFETTEAAEAAVQAL 243
Query: 172 NGM-LLNSKIVFVGKFIPRKEREKELGEK----------AKLFTNVYIKNFGEDFNDEKL 220
NG + K ++V + + ER++EL K + N+Y+KN + +D++L
Sbjct: 244 NGKDMGEGKSLYVARAQKKAERQQELKRKFEELKQKRHESVFGVNLYVKNLDDTIDDDRL 303
Query: 221 KEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQ 279
+ F PYG ITS +VM ++ G+S+GFGFV + + A AV NG+ V K LYV AQ
Sbjct: 304 RIAFSPYGNITSAKVMTDEEGRSKGFGFVCFNAASEATCAVTELNGRVVGSKPLYVALAQ 363
Query: 280 KKAERTQELKRRF 292
+K ER L ++
Sbjct: 364 RKEERKAHLASQY 376
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 125/229 (54%), Gaps = 18/229 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + ++ +++ FS G +LS +V +D S GY +V+F+ A +++
Sbjct: 1 MASLYVGDLPQDVNESGLFEKFSTAGPVLSIRVCRDVITRRSLGYAYVNFQQPADAERAL 60
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N LL +K + I +R+ L NV+IKN +++ + + F +G
Sbjct: 61 DTMNFDLLRNKPI----RIMWSQRDPSLRRSG--VGNVFIKNLDRAIDNKAIYDTFSAFG 114
Query: 229 TITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQE 287
I S +V ++ G S+G+GFV +E+ E A ++ NG ++GK +YVG+ + ER +E
Sbjct: 115 NILSCKVATDEKGNSKGYGFVHFETEEAANTSIDKVNGMLLNGKKVYVGKFIPRKEREKE 174
Query: 288 LKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
L + ++ N+YVKN + DDE+L++ F P+G ITS K
Sbjct: 175 LGEKAKLF----------TNVYVKNFTEDFDDEKLKEFFEPYGKITSYK 213
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 63/105 (60%), Gaps = 1/105 (0%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
N+++KNLD +ID+ + FS +G+I S KV DE+G SKG+GFV F A ++ ++
Sbjct: 288 NLYVKNLDDTIDDDRLRIAFSPYGNITSAKVMTDEEGRSKGFGFVCFNAASEATCAVTEL 347
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEK-AKLFTNVYIKNFGEDF 215
NG ++ SK ++V ++ER+ L + + T + ++ G+ F
Sbjct: 348 NGRVVGSKPLYVALAQRKEERKAHLASQYMRHMTGMRMQQLGQIF 392
>gi|195487595|ref|XP_002091975.1| GE11925 [Drosophila yakuba]
gi|194178076|gb|EDW91687.1| GE11925 [Drosophila yakuba]
Length = 634
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 211/276 (76%), Positives = 237/276 (85%), Gaps = 4/276 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD ++ +PIRIMWSQRDPSLR+SGVGNVFIKNLDK+I
Sbjct: 44 GYAYVNFQQP--ADAERALDTMNFDLVRNKPIRIMWSQRDPSLRRSGVGNVFIKNLDKAI 101
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFSAFG+ILSCKVA DE+GNSKGYGFVHFETEEAAN SI+KVNGMLLN K V+
Sbjct: 102 DNKAIYDTFSAFGNILSCKVATDEKGNSKGYGFVHFETEEAANTSIDKVNGMLLNGKKVY 161
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGK 241
VGKFIPRKEREKELGEKAKLFTNVY+KNF EDF+DEKLKE FEPYG ITSY+VM+ DGK
Sbjct: 162 VGKFIPRKEREKELGEKAKLFTNVYVKNFTEDFDDEKLKEFFEPYGKITSYKVMSKEDGK 221
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEV-DGKILYVGRAQKKAERTQELKRRFEMLKIERL 300
S+GFGFVA+E+ E AE AVQA NGK++ +GK LYV RAQKKAER QELKR+FE LK +R
Sbjct: 222 SKGFGFVAFETTEAAEAAVQALNGKDMGEGKSLYVARAQKKAERQQELKRKFEELKQKRH 281
Query: 301 NRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
GVNLYVKNLDD+IDD+RLR F+P+G ITSAK
Sbjct: 282 ESVFGVNLYVKNLDDTIDDDRLRVAFSPYGNITSAK 317
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 73/193 (37%), Positives = 112/193 (58%), Gaps = 12/193 (6%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV++KN + D++ + + F +G I S KV E G SKG+GFV FET EAA +++ +
Sbjct: 184 NVYVKNFTEDFDDEKLKEFFEPYGKITSYKVMSKEDGKSKGFGFVAFETTEAAEAAVQAL 243
Query: 172 NGM-LLNSKIVFVGKFIPRKEREKELGEK----------AKLFTNVYIKNFGEDFNDEKL 220
NG + K ++V + + ER++EL K + N+Y+KN + +D++L
Sbjct: 244 NGKDMGEGKSLYVARAQKKAERQQELKRKFEELKQKRHESVFGVNLYVKNLDDTIDDDRL 303
Query: 221 KEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQ 279
+ F PYG ITS +VM ++ G+S+GFGFV + +P A AV NG+ V K LYV AQ
Sbjct: 304 RVAFSPYGNITSAKVMTDEEGRSKGFGFVCFNAPSEATCAVTELNGRVVGSKPLYVALAQ 363
Query: 280 KKAERTQELKRRF 292
+K ER L ++
Sbjct: 364 RKEERKAHLASQY 376
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 127/229 (55%), Gaps = 18/229 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + ++ ++D FS+ G +LS +V +D S GY +V+F+ A +++
Sbjct: 1 MASLYVGDLPQDVNESGLFDKFSSAGPVLSIRVCRDVITRRSLGYAYVNFQQPADAERAL 60
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N L+ +K + I +R+ L NV+IKN + +++ + + F +G
Sbjct: 61 DTMNFDLVRNKPI----RIMWSQRDPSLRRSG--VGNVFIKNLDKAIDNKAIYDTFSAFG 114
Query: 229 TITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQE 287
I S +V ++ G S+G+GFV +E+ E A ++ NG ++GK +YVG+ + ER +E
Sbjct: 115 NILSCKVATDEKGNSKGYGFVHFETEEAANTSIDKVNGMLLNGKKVYVGKFIPRKEREKE 174
Query: 288 LKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
L + ++ N+YVKN + DDE+L++ F P+G ITS K
Sbjct: 175 LGEKAKLF----------TNVYVKNFTEDFDDEKLKEFFEPYGKITSYK 213
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 65/116 (56%), Gaps = 1/116 (0%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
N+++KNLD +ID+ + FS +G+I S KV DE+G SKG+GFV F A ++ ++
Sbjct: 288 NLYVKNLDDTIDDDRLRVAFSPYGNITSAKVMTDEEGRSKGFGFVCFNAPSEATCAVTEL 347
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEK-AKLFTNVYIKNFGEDFNDEKLKEMFEP 226
NG ++ SK ++V ++ER+ L + + T + ++ G+ F F P
Sbjct: 348 NGRVVGSKPLYVALAQRKEERKAHLASQYMRHMTGMRMQQLGQIFQPNTASGFFVP 403
>gi|195150897|ref|XP_002016387.1| GL11548 [Drosophila persimilis]
gi|194110234|gb|EDW32277.1| GL11548 [Drosophila persimilis]
Length = 640
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 212/276 (76%), Positives = 238/276 (86%), Gaps = 4/276 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD ++ +PIRIMWSQRDPSLR+SGVGNVFIKNLDK I
Sbjct: 44 GYAYVNFQQP--ADAERALDTMNFDLIRNKPIRIMWSQRDPSLRRSGVGNVFIKNLDKGI 101
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFSAFG+ILSCKVA DE+GNSKGYGFVHFETEEAAN SI++VNGMLLN K V+
Sbjct: 102 DNKAIYDTFSAFGNILSCKVAIDEKGNSKGYGFVHFETEEAANTSIDRVNGMLLNGKKVY 161
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGK 241
VGKFIPRKEREKELGEKAKLFTNVY+KNF EDF+DEKLKE FEPYG ITSY+VM+ DGK
Sbjct: 162 VGKFIPRKEREKELGEKAKLFTNVYVKNFTEDFDDEKLKEFFEPYGKITSYKVMSKEDGK 221
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEV-DGKILYVGRAQKKAERTQELKRRFEMLKIERL 300
S+GFGFVAYE+ E AE AVQA NGK++ + K LYV RAQKKAER QELKR+FE LK +R
Sbjct: 222 SKGFGFVAYETTEAAEAAVQALNGKDMGESKSLYVARAQKKAERQQELKRKFEELKKKRH 281
Query: 301 NRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ GVNLYVKNLDD+IDDERLRK+F+ +GTITSAK
Sbjct: 282 DSVFGVNLYVKNLDDTIDDERLRKDFSMYGTITSAK 317
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 74/193 (38%), Positives = 114/193 (59%), Gaps = 12/193 (6%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV++KN + D++ + + F +G I S KV E G SKG+GFV +ET EAA +++ +
Sbjct: 184 NVYVKNFTEDFDDEKLKEFFEPYGKITSYKVMSKEDGKSKGFGFVAYETTEAAEAAVQAL 243
Query: 172 NGM-LLNSKIVFVGKFIPRKEREKELGEK----------AKLFTNVYIKNFGEDFNDEKL 220
NG + SK ++V + + ER++EL K + N+Y+KN + +DE+L
Sbjct: 244 NGKDMGESKSLYVARAQKKAERQQELKRKFEELKKKRHDSVFGVNLYVKNLDDTIDDERL 303
Query: 221 KEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQ 279
++ F YGTITS +VM ++ G+S+GFGFV + SP A AV NG+ + K LYV AQ
Sbjct: 304 RKDFSMYGTITSAKVMTDEEGRSKGFGFVCFISPNEATCAVTELNGRVIGSKPLYVALAQ 363
Query: 280 KKAERTQELKRRF 292
+K ER L ++
Sbjct: 364 RKEERKAHLASQY 376
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 126/229 (55%), Gaps = 18/229 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + I+ +++ FS G +LS +V +D S GY +V+F+ A +++
Sbjct: 1 MASLYVGDLHQDINEAGLFEKFSTAGPVLSIRVCRDVITRRSLGYAYVNFQQPADAERAL 60
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N L+ +K + I +R+ L NV+IKN + +++ + + F +G
Sbjct: 61 DTMNFDLIRNKPI----RIMWSQRDPSLRRSG--VGNVFIKNLDKGIDNKAIYDTFSAFG 114
Query: 229 TITSYRV-MNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQE 287
I S +V ++ G S+G+GFV +E+ E A ++ NG ++GK +YVG+ + ER +E
Sbjct: 115 NILSCKVAIDEKGNSKGYGFVHFETEEAANTSIDRVNGMLLNGKKVYVGKFIPRKEREKE 174
Query: 288 LKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
L + ++ N+YVKN + DDE+L++ F P+G ITS K
Sbjct: 175 LGEKAKLF----------TNVYVKNFTEDFDDEKLKEFFEPYGKITSYK 213
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 67/116 (57%), Gaps = 1/116 (0%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
N+++KNLD +ID++ + FS +G+I S KV DE+G SKG+GFV F + A ++ ++
Sbjct: 288 NLYVKNLDDTIDDERLRKDFSMYGTITSAKVMTDEEGRSKGFGFVCFISPNEATCAVTEL 347
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEK-AKLFTNVYIKNFGEDFNDEKLKEMFEP 226
NG ++ SK ++V ++ER+ L + + T + ++ G+ F F P
Sbjct: 348 NGRVIGSKPLYVALAQRKEERKAHLASQYMRHMTGMRMQQLGQMFQPNTTGGFFVP 403
>gi|125808454|ref|XP_001360757.1| GA18673 [Drosophila pseudoobscura pseudoobscura]
gi|54635929|gb|EAL25332.1| GA18673 [Drosophila pseudoobscura pseudoobscura]
Length = 640
Score = 424 bits (1091), Expect = e-116, Method: Compositional matrix adjust.
Identities = 212/276 (76%), Positives = 238/276 (86%), Gaps = 4/276 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD ++ +PIRIMWSQRDPSLR+SGVGNVFIKNLDK I
Sbjct: 44 GYAYVNFQQP--ADAERALDTMNFDLIRNKPIRIMWSQRDPSLRRSGVGNVFIKNLDKGI 101
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFSAFG+ILSCKVA DE+GNSKGYGFVHFETEEAAN SI++VNGMLLN K V+
Sbjct: 102 DNKAIYDTFSAFGNILSCKVAIDEKGNSKGYGFVHFETEEAANMSIDRVNGMLLNGKKVY 161
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGK 241
VGKFIPRKEREKELGEKAKLFTNVY+KNF EDF+DEKLKE FEPYG ITSY+VM+ DGK
Sbjct: 162 VGKFIPRKEREKELGEKAKLFTNVYVKNFTEDFDDEKLKEFFEPYGKITSYKVMSKEDGK 221
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEV-DGKILYVGRAQKKAERTQELKRRFEMLKIERL 300
S+GFGFVAYE+ E AE AVQA NGK++ + K LYV RAQKKAER QELKR+FE LK +R
Sbjct: 222 SKGFGFVAYETTEAAEAAVQALNGKDMGESKSLYVARAQKKAERQQELKRKFEELKKKRH 281
Query: 301 NRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ GVNLYVKNLDD+IDDERLRK+F+ +GTITSAK
Sbjct: 282 DSVFGVNLYVKNLDDTIDDERLRKDFSMYGTITSAK 317
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 74/193 (38%), Positives = 114/193 (59%), Gaps = 12/193 (6%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV++KN + D++ + + F +G I S KV E G SKG+GFV +ET EAA +++ +
Sbjct: 184 NVYVKNFTEDFDDEKLKEFFEPYGKITSYKVMSKEDGKSKGFGFVAYETTEAAEAAVQAL 243
Query: 172 NGMLLN-SKIVFVGKFIPRKEREKELGEK----------AKLFTNVYIKNFGEDFNDEKL 220
NG + SK ++V + + ER++EL K + N+Y+KN + +DE+L
Sbjct: 244 NGKDMGESKSLYVARAQKKAERQQELKRKFEELKKKRHDSVFGVNLYVKNLDDTIDDERL 303
Query: 221 KEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQ 279
++ F YGTITS +VM ++ G+S+GFGFV + SP A AV NG+ + K LYV AQ
Sbjct: 304 RKDFSMYGTITSAKVMTDEEGRSKGFGFVCFISPNEATCAVTELNGRVIGSKPLYVALAQ 363
Query: 280 KKAERTQELKRRF 292
+K ER L ++
Sbjct: 364 RKEERKAHLASQY 376
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 126/229 (55%), Gaps = 18/229 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + I+ +++ FS G +LS +V +D S GY +V+F+ A +++
Sbjct: 1 MASLYVGDLHQDINEAGLFEKFSTAGPVLSIRVCRDVITRRSLGYAYVNFQQPADAERAL 60
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N L+ +K + I +R+ L NV+IKN + +++ + + F +G
Sbjct: 61 DTMNFDLIRNKPI----RIMWSQRDPSLRRSG--VGNVFIKNLDKGIDNKAIYDTFSAFG 114
Query: 229 TITSYRV-MNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQE 287
I S +V ++ G S+G+GFV +E+ E A ++ NG ++GK +YVG+ + ER +E
Sbjct: 115 NILSCKVAIDEKGNSKGYGFVHFETEEAANMSIDRVNGMLLNGKKVYVGKFIPRKEREKE 174
Query: 288 LKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
L + ++ N+YVKN + DDE+L++ F P+G ITS K
Sbjct: 175 LGEKAKLF----------TNVYVKNFTEDFDDEKLKEFFEPYGKITSYK 213
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 67/116 (57%), Gaps = 1/116 (0%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
N+++KNLD +ID++ + FS +G+I S KV DE+G SKG+GFV F + A ++ ++
Sbjct: 288 NLYVKNLDDTIDDERLRKDFSMYGTITSAKVMTDEEGRSKGFGFVCFISPNEATCAVTEL 347
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEK-AKLFTNVYIKNFGEDFNDEKLKEMFEP 226
NG ++ SK ++V ++ER+ L + + T + ++ G+ F F P
Sbjct: 348 NGRVIGSKPLYVALAQRKEERKAHLASQYMRHMTGMRMQQLGQMFQPNTTGGFFVP 403
>gi|17136378|ref|NP_476667.1| polyA-binding protein, isoform A [Drosophila melanogaster]
gi|24654793|ref|NP_725749.1| polyA-binding protein, isoform B [Drosophila melanogaster]
gi|24654797|ref|NP_725750.1| polyA-binding protein, isoform C [Drosophila melanogaster]
gi|195335482|ref|XP_002034394.1| GM21847 [Drosophila sechellia]
gi|76803808|sp|P21187.3|PABP_DROME RecName: Full=Polyadenylate-binding protein; Short=PABP;
Short=Poly(A)-binding protein
gi|7302665|gb|AAF57745.1| polyA-binding protein, isoform B [Drosophila melanogaster]
gi|7302666|gb|AAF57746.1| polyA-binding protein, isoform C [Drosophila melanogaster]
gi|21428474|gb|AAM49897.1| LD24412p [Drosophila melanogaster]
gi|21626472|gb|AAM68175.1| polyA-binding protein, isoform A [Drosophila melanogaster]
gi|194126364|gb|EDW48407.1| GM21847 [Drosophila sechellia]
gi|220946756|gb|ACL85921.1| pAbp-PA [synthetic construct]
Length = 634
Score = 424 bits (1089), Expect = e-116, Method: Compositional matrix adjust.
Identities = 210/276 (76%), Positives = 237/276 (85%), Gaps = 4/276 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD ++ +PIRIMWSQRDPSLR+SGVGNVFIKNLD++I
Sbjct: 44 GYAYVNFQQP--ADAERALDTMNFDLVRNKPIRIMWSQRDPSLRRSGVGNVFIKNLDRAI 101
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFSAFG+ILSCKVA DE+GNSKGYGFVHFETEEAAN SI+KVNGMLLN K V+
Sbjct: 102 DNKAIYDTFSAFGNILSCKVATDEKGNSKGYGFVHFETEEAANTSIDKVNGMLLNGKKVY 161
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGK 241
VGKFIPRKEREKELGEKAKLFTNVY+KNF EDF+DEKLKE FEPYG ITSY+VM+ DGK
Sbjct: 162 VGKFIPRKEREKELGEKAKLFTNVYVKNFTEDFDDEKLKEFFEPYGKITSYKVMSKEDGK 221
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEV-DGKILYVGRAQKKAERTQELKRRFEMLKIERL 300
S+GFGFVA+E+ E AE AVQA NGK++ +GK LYV RAQKKAER QELKR+FE LK +R
Sbjct: 222 SKGFGFVAFETTEAAEAAVQALNGKDMGEGKSLYVARAQKKAERQQELKRKFEELKQKRH 281
Query: 301 NRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
GVNLYVKNLDD+IDD+RLR F+P+G ITSAK
Sbjct: 282 ESVFGVNLYVKNLDDTIDDDRLRIAFSPYGNITSAK 317
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 72/193 (37%), Positives = 111/193 (57%), Gaps = 12/193 (6%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV++KN + D++ + + F +G I S KV E G SKG+GFV FET EAA +++ +
Sbjct: 184 NVYVKNFTEDFDDEKLKEFFEPYGKITSYKVMSKEDGKSKGFGFVAFETTEAAEAAVQAL 243
Query: 172 NGM-LLNSKIVFVGKFIPRKEREKELGEK----------AKLFTNVYIKNFGEDFNDEKL 220
NG + K ++V + + ER++EL K + N+Y+KN + +D++L
Sbjct: 244 NGKDMGEGKSLYVARAQKKAERQQELKRKFEELKQKRHESVFGVNLYVKNLDDTIDDDRL 303
Query: 221 KEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQ 279
+ F PYG ITS +VM ++ G+S+GFGFV + + A AV NG+ V K LYV AQ
Sbjct: 304 RIAFSPYGNITSAKVMTDEEGRSKGFGFVCFNAASEATCAVTELNGRVVGSKPLYVALAQ 363
Query: 280 KKAERTQELKRRF 292
+K ER L ++
Sbjct: 364 RKEERKAHLASQY 376
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 126/229 (55%), Gaps = 18/229 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + ++ ++D FS+ G +LS +V +D S GY +V+F+ A +++
Sbjct: 1 MASLYVGDLPQDVNESGLFDKFSSAGPVLSIRVCRDVITRRSLGYAYVNFQQPADAERAL 60
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N L+ +K + I +R+ L NV+IKN +++ + + F +G
Sbjct: 61 DTMNFDLVRNKPI----RIMWSQRDPSLRRSG--VGNVFIKNLDRAIDNKAIYDTFSAFG 114
Query: 229 TITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQE 287
I S +V ++ G S+G+GFV +E+ E A ++ NG ++GK +YVG+ + ER +E
Sbjct: 115 NILSCKVATDEKGNSKGYGFVHFETEEAANTSIDKVNGMLLNGKKVYVGKFIPRKEREKE 174
Query: 288 LKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
L + ++ N+YVKN + DDE+L++ F P+G ITS K
Sbjct: 175 LGEKAKLF----------TNVYVKNFTEDFDDEKLKEFFEPYGKITSYK 213
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 65/116 (56%), Gaps = 1/116 (0%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
N+++KNLD +ID+ + FS +G+I S KV DE+G SKG+GFV F A ++ ++
Sbjct: 288 NLYVKNLDDTIDDDRLRIAFSPYGNITSAKVMTDEEGRSKGFGFVCFNAASEATCAVTEL 347
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEK-AKLFTNVYIKNFGEDFNDEKLKEMFEP 226
NG ++ SK ++V ++ER+ L + + T + ++ G+ + F P
Sbjct: 348 NGRVVGSKPLYVALAQRKEERKAHLASQYMRHMTGMRMQQLGQIYQPNAASGFFVP 403
>gi|195584475|ref|XP_002082032.1| GD11341 [Drosophila simulans]
gi|194194041|gb|EDX07617.1| GD11341 [Drosophila simulans]
Length = 379
Score = 421 bits (1083), Expect = e-115, Method: Compositional matrix adjust.
Identities = 210/276 (76%), Positives = 237/276 (85%), Gaps = 4/276 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD ++ +PIRIMWSQRDPSLR+SGVGNVFIKNLD++I
Sbjct: 44 GYAYVNFQQP--ADAERALDTMNFDLVRNKPIRIMWSQRDPSLRRSGVGNVFIKNLDRAI 101
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFSAFG+ILSCKVA DE+GNSKGYGFVHFETEEAAN SI+KVNGMLLN K V+
Sbjct: 102 DNKAIYDTFSAFGNILSCKVATDEKGNSKGYGFVHFETEEAANTSIDKVNGMLLNGKKVY 161
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGK 241
VGKFIPRKEREKELGEKAKLFTNVY+KNF EDF+DEKLKE FEPYG ITSY+VM+ DGK
Sbjct: 162 VGKFIPRKEREKELGEKAKLFTNVYVKNFTEDFDDEKLKEFFEPYGKITSYKVMSKEDGK 221
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEV-DGKILYVGRAQKKAERTQELKRRFEMLKIERL 300
S+GFGFVA+E+ E AE AVQA NGK++ +GK LYV RAQKKAER QELKR+FE LK +R
Sbjct: 222 SKGFGFVAFETTEAAEAAVQALNGKDMGEGKSLYVARAQKKAERQQELKRKFEELKQKRH 281
Query: 301 NRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
GVNLYVKNLDD+IDD+RLR F+P+G ITSAK
Sbjct: 282 ESVFGVNLYVKNLDDTIDDDRLRIAFSPYGNITSAK 317
Score = 127 bits (318), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 72/195 (36%), Positives = 112/195 (57%), Gaps = 12/195 (6%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV++KN + D++ + + F +G I S KV E G SKG+GFV FET EAA +++ +
Sbjct: 184 NVYVKNFTEDFDDEKLKEFFEPYGKITSYKVMSKEDGKSKGFGFVAFETTEAAEAAVQAL 243
Query: 172 NGMLLN-SKIVFVGKFIPRKEREKELGEK----------AKLFTNVYIKNFGEDFNDEKL 220
NG + K ++V + + ER++EL K + N+Y+KN + +D++L
Sbjct: 244 NGKDMGEGKSLYVARAQKKAERQQELKRKFEELKQKRHESVFGVNLYVKNLDDTIDDDRL 303
Query: 221 KEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQ 279
+ F PYG ITS +VM ++ G+S+GFGFV + + A AV NG+ V K LYV AQ
Sbjct: 304 RIAFSPYGNITSAKVMTDEEGRSKGFGFVCFNAASEATCAVTELNGRVVGSKPLYVALAQ 363
Query: 280 KKAERTQELKRRFEM 294
+K ER L ++ +
Sbjct: 364 RKEERKAHLASQYML 378
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 126/229 (55%), Gaps = 18/229 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + ++ ++D FS+ G +LS +V +D S GY +V+F+ A +++
Sbjct: 1 MASLYVGDLPQDVNESGLFDKFSSAGPVLSIRVCRDVITRRSLGYAYVNFQQPADAERAL 60
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N L+ +K + I +R+ L NV+IKN +++ + + F +G
Sbjct: 61 DTMNFDLVRNKPI----RIMWSQRDPSLRRSG--VGNVFIKNLDRAIDNKAIYDTFSAFG 114
Query: 229 TITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQE 287
I S +V ++ G S+G+GFV +E+ E A ++ NG ++GK +YVG+ + ER +E
Sbjct: 115 NILSCKVATDEKGNSKGYGFVHFETEEAANTSIDKVNGMLLNGKKVYVGKFIPRKEREKE 174
Query: 288 LKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
L + ++ N+YVKN + DDE+L++ F P+G ITS K
Sbjct: 175 LGEKAKLF----------TNVYVKNFTEDFDDEKLKEFFEPYGKITSYK 213
>gi|391332716|ref|XP_003740776.1| PREDICTED: polyadenylate-binding protein 1-like [Metaseiulus
occidentalis]
Length = 660
Score = 418 bits (1074), Expect = e-114, Method: Compositional matrix adjust.
Identities = 203/276 (73%), Positives = 236/276 (85%), Gaps = 4/276 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNF+ LK RP+RIMWSQRDPSLRKSGVGNVFIKNL K I
Sbjct: 53 GYAYVNFHQPG--DAERALDTMNFEPLKNRPMRIMWSQRDPSLRKSGVGNVFIKNLHKDI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA++DTFSAFG+ILSC+VA DEQGNS+GYGFVHFETEEAAN++I KVNGMLLN K VF
Sbjct: 111 DNKAIFDTFSAFGNILSCRVATDEQGNSRGYGFVHFETEEAANEAINKVNGMLLNEKKVF 170
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GK 241
VGKF+PR ERE+ +G+KA+LFTNVY+KNFGE+ +D KLKEMFE YG ITS RVM + GK
Sbjct: 171 VGKFVPRSERERMMGDKARLFTNVYVKNFGEELDDGKLKEMFEVYGKITSARVMTDQTGK 230
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEV-DGKILYVGRAQKKAERTQELKRRFEMLKIERL 300
SRGFGFV++E+P+ AE+AV+ N KE+ +GK +YVGRAQKKAER +LKR+FE LK+ER+
Sbjct: 231 SRGFGFVSFENPDNAEQAVKELNDKELGNGKKIYVGRAQKKAERLSDLKRKFEQLKMERM 290
Query: 301 NRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLYVKNLDD IDDERLR+EF P+GTITSAK
Sbjct: 291 TRYQGVNLYVKNLDDVIDDERLRREFAPYGTITSAK 326
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 75/210 (35%), Positives = 119/210 (56%), Gaps = 20/210 (9%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV++KN + +D+ + + F +G I S +V D+ G S+G+GFV FE + A ++++++
Sbjct: 193 NVYVKNFGEELDDGKLKEMFEVYGKITSARVMTDQTGKSRGFGFVSFENPDNAEQAVKEL 252
Query: 172 NGMLL-NSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKL 220
N L N K ++VG+ + ER +L K + N+Y+KN + +DE+L
Sbjct: 253 NDKELGNGKKIYVGRAQKKAERLSDLKRKFEQLKMERMTRYQGVNLYVKNLDDVIDDERL 312
Query: 221 KEMFEPYGTITSYRVM--NNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRA 278
+ F PYGTITS +VM + +S+GFGFV + SPE A KAV NG+ + K LYV A
Sbjct: 313 RREFAPYGTITSAKVMMDSTGARSKGFGFVCFSSPEEATKAVTEMNGRIIVQKPLYVALA 372
Query: 279 QKKAERTQELKRRFEMLKIERLNRYQGVNL 308
Q+K +R L +F + R+ GV +
Sbjct: 373 QRKEDRRAHLSSQF-------VQRFTGVRV 395
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 125/236 (52%), Gaps = 23/236 (9%)
Query: 108 SGVGN-----VFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETE 161
SG GN +++ +LD + +++ F G +LS +V +D S GY +V+F
Sbjct: 3 SGGGNYTMASLYVGDLDPDVTESMLFEKFCQAGPVLSIRVCRDMISRRSLGYAYVNFHQP 62
Query: 162 EAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLK 221
A ++++ +N L ++ + I +R+ L + NV+IKN +D +++ +
Sbjct: 63 GDAERALDTMNFEPLKNRPM----RIMWSQRDPSLRKSG--VGNVFIKNLHKDIDNKAIF 116
Query: 222 EMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
+ F +G I S RV ++ G SRG+GFV +E+ E A +A+ NG ++ K ++VG+
Sbjct: 117 DTFSAFGNILSCRVATDEQGNSRGYGFVHFETEEAANEAINKVNGMLLNEKKVFVGKFVP 176
Query: 281 KAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
++ER + + + + N+YVKN + +DD +L++ F +G ITSA+
Sbjct: 177 RSERERMMGDKARLF----------TNVYVKNFGEELDDGKLKEMFEVYGKITSAR 222
>gi|340719920|ref|XP_003398392.1| PREDICTED: polyadenylate-binding protein 1-like isoform 2 [Bombus
terrestris]
Length = 609
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 209/276 (75%), Positives = 226/276 (81%), Gaps = 25/276 (9%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD +KGRPIRIMWSQRDPSLRKSGVGNVFIKNLDK+I
Sbjct: 53 GYAYVNFQQP--ADAERALDTMNFDMIKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKNI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKAMYDTFSAFG+ILSCKVAQDE G SKGYGFVHFETEEAANKSI++VNGMLLN K
Sbjct: 111 DNKAMYDTFSAFGNILSCKVAQDESGVSKGYGFVHFETEEAANKSIDRVNGMLLNGK--- 167
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGK 241
KLFTNVY+KNFGED D+KLKEMFE YGTITS++VM +DGK
Sbjct: 168 ------------------KLFTNVYVKNFGEDMTDDKLKEMFEKYGTITSHKVMIKDDGK 209
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEV-DGKILYVGRAQKKAERTQELKRRFEMLKIERL 300
SRGFGFVA+E P+ AE+AV NGKEV +GK +YVGRAQKKAER QELKR+FE LK+ERL
Sbjct: 210 SRGFGFVAFEDPDAAEQAVLELNGKEVAEGKCMYVGRAQKKAERQQELKRKFEQLKLERL 269
Query: 301 NRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
NRYQGVNLYVKNLDDSIDDERLRKEF PFGTITSAK
Sbjct: 270 NRYQGVNLYVKNLDDSIDDERLRKEFAPFGTITSAK 305
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 70/192 (36%), Positives = 116/192 (60%), Gaps = 11/192 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV++KN + + + + + F +G+I S KV + G S+G+GFV FE +AA +++ ++
Sbjct: 172 NVYVKNFGEDMTDDKLKEMFEKYGTITSHKVMIKDDGKSRGFGFVAFEDPDAAEQAVLEL 231
Query: 172 NGM-LLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKL 220
NG + K ++VG+ + ER++EL K + N+Y+KN + +DE+L
Sbjct: 232 NGKEVAEGKCMYVGRAQKKAERQQELKRKFEQLKLERLNRYQGVNLYVKNLDDSIDDERL 291
Query: 221 KEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
++ F P+GTITS +VM +G+S+GFGFV + +PE A KAV NG+ + K LYV AQ+
Sbjct: 292 RKEFAPFGTITSAKVMMEEGRSKGFGFVCFSAPEEATKAVTEMNGRIIVTKPLYVALAQR 351
Query: 281 KAERTQELKRRF 292
K +R L ++
Sbjct: 352 KEDRKAHLASQY 363
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 117/237 (49%), Gaps = 39/237 (16%)
Query: 102 DPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFET 160
+P + ++++ +L I +++ FS+ G +LS +V +D S GY +V+F+
Sbjct: 2 NPGAPNYPMASLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 161 EEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKL 220
A ++++ +N ++ + + I +R+ L + NV+IKN ++ +++ +
Sbjct: 62 PADAERALDTMNFDMIKGRPI----RIMWSQRDPSLRKSG--VGNVFIKNLDKNIDNKAM 115
Query: 221 KEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQ 279
+ F +G I S +V ++ G S+G+GFV +E+ E A K++ NG ++GK L+
Sbjct: 116 YDTFSAFGNILSCKVAQDESGVSKGYGFVHFETEEAANKSIDRVNGMLLNGKKLF----- 170
Query: 280 KKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
N+YVKN + + D++L++ F +GTITS K
Sbjct: 171 --------------------------TNVYVKNFGEDMTDDKLKEMFEKYGTITSHK 201
>gi|495594|gb|AAA70421.1| poly(A)-binding protein [Drosophila melanogaster]
Length = 632
Score = 413 bits (1062), Expect = e-113, Method: Compositional matrix adjust.
Identities = 207/276 (75%), Positives = 235/276 (85%), Gaps = 6/276 (2%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD ++ +PIRIMWSQRDPSLR+SGVGNVFIKNLD++I
Sbjct: 44 GYAYVNFQQP--ADAERALDTMNFDLVRNKPIRIMWSQRDPSLRRSGVGNVFIKNLDRAI 101
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFSAFG+ILSCKVA DE+GNSKGYGFVHFETEEAAN SI+KVNGMLLN K V+
Sbjct: 102 DNKAIYDTFSAFGNILSCKVATDEKGNSKGYGFVHFETEEAANTSIDKVNGMLLNGKKVY 161
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGK 241
VGKFIPRK E+ELGEKAKLFTNVY+KNF EDF+DEKLKE FEPYG ITSY+VM+ DGK
Sbjct: 162 VGKFIPRK--EQELGEKAKLFTNVYVKNFTEDFDDEKLKEFFEPYGKITSYKVMSKEDGK 219
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEV-DGKILYVGRAQKKAERTQELKRRFEMLKIERL 300
S+GFGFVA+E+ E AE AVQA NGK++ +GK LYV RAQKKAER QELKR+FE LK +R
Sbjct: 220 SKGFGFVAFETTEAAEAAVQALNGKDMGEGKSLYVARAQKKAERQQELKRKFEELKQKRH 279
Query: 301 NRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
GVNLYVKNLDD+IDD+RLR F+P+G ITSAK
Sbjct: 280 ESVFGVNLYVKNLDDTIDDDRLRIAFSPYGNITSAK 315
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 72/193 (37%), Positives = 111/193 (57%), Gaps = 12/193 (6%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV++KN + D++ + + F +G I S KV E G SKG+GFV FET EAA +++ +
Sbjct: 182 NVYVKNFTEDFDDEKLKEFFEPYGKITSYKVMSKEDGKSKGFGFVAFETTEAAEAAVQAL 241
Query: 172 NGM-LLNSKIVFVGKFIPRKEREKELGEK----------AKLFTNVYIKNFGEDFNDEKL 220
NG + K ++V + + ER++EL K + N+Y+KN + +D++L
Sbjct: 242 NGKDMGEGKSLYVARAQKKAERQQELKRKFEELKQKRHESVFGVNLYVKNLDDTIDDDRL 301
Query: 221 KEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQ 279
+ F PYG ITS +VM ++ G+S+GFGFV + A AV NG+ V K LYV AQ
Sbjct: 302 RIAFSPYGNITSAKVMTDEEGRSKGFGFVCFNPESEATCAVTELNGRVVGSKPLYVALAQ 361
Query: 280 KKAERTQELKRRF 292
+K ER +L ++
Sbjct: 362 RKEERKADLASQY 374
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 125/229 (54%), Gaps = 20/229 (8%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + ++ ++D FS+ G +LS +V +D S GY +V+F+ A +++
Sbjct: 1 MASLYVGDLPQDVNESGLFDKFSSAGPVLSIRVCRDVITRRSLGYAYVNFQQPADAERAL 60
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N L+ +K + I +R+ L NV+IKN +++ + + F +G
Sbjct: 61 DTMNFDLVRNKPI----RIMWSQRDPSLRRSG--VGNVFIKNLDRAIDNKAIYDTFSAFG 114
Query: 229 TITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQE 287
I S +V ++ G S+G+GFV +E+ E A ++ NG ++GK +YVG+ + E QE
Sbjct: 115 NILSCKVATDEKGNSKGYGFVHFETEEAANTSIDKVNGMLLNGKKVYVGKFIPRKE--QE 172
Query: 288 LKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
L + ++ N+YVKN + DDE+L++ F P+G ITS K
Sbjct: 173 LGEKAKLF----------TNVYVKNFTEDFDDEKLKEFFEPYGKITSYK 211
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 67/116 (57%), Gaps = 1/116 (0%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
N+++KNLD +ID+ + FS +G+I S KV DE+G SKG+GFV F E A ++ ++
Sbjct: 286 NLYVKNLDDTIDDDRLRIAFSPYGNITSAKVMTDEEGRSKGFGFVCFNPESEATCAVTEL 345
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEK-AKLFTNVYIKNFGEDFNDEKLKEMFEP 226
NG ++ SK ++V ++ER+ +L + + T + ++ G+ + F P
Sbjct: 346 NGRVVGSKPLYVALAQRKEERKADLASQYMRHMTGMRMQQLGQIYQPNAASGFFVP 401
>gi|193650237|ref|XP_001943392.1| PREDICTED: polyadenylate-binding protein 1-like [Acyrthosiphon
pisum]
Length = 650
Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust.
Identities = 199/265 (75%), Positives = 230/265 (86%), Gaps = 2/265 (0%)
Query: 74 MLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSA 133
+ D ERALDTMNFD LKG P+RIMWSQRDPSLRKSGVGNVFIKNLD+SIDNKAMYDTFSA
Sbjct: 53 IADAERALDTMNFDILKGHPMRIMWSQRDPSLRKSGVGNVFIKNLDRSIDNKAMYDTFSA 112
Query: 134 FGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKERE 193
FG+ILSCKVAQDE GNSKGYGFVHFET+++A +SIEKVNGMLLN K VFVG+F+ R +RE
Sbjct: 113 FGNILSCKVAQDETGNSKGYGFVHFETKQSATQSIEKVNGMLLNGKKVFVGRFVGRNDRE 172
Query: 194 KELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYES 252
KELG++AKL+TNVYIKN E+ N+++L EMF+ YGTITS +VM +DG SRGFGFVA+E
Sbjct: 173 KELGQRAKLYTNVYIKNIDENVNEKELFEMFKKYGTITSCKVMFKDDGSSRGFGFVAFED 232
Query: 253 PEFAEKAVQAWNGKE-VDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVK 311
P+ AEKAV +GK+ +GK YV RAQKK ER QELKR+FE KIER+NRYQGVNLYVK
Sbjct: 233 PKEAEKAVTELHGKKSPEGKTYYVNRAQKKTERQQELKRKFEQYKIERINRYQGVNLYVK 292
Query: 312 NLDDSIDDERLRKEFTPFGTITSAK 336
NLDD+IDDERLR+EF+ FGTI SAK
Sbjct: 293 NLDDTIDDERLRREFSAFGTIKSAK 317
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 73/192 (38%), Positives = 118/192 (61%), Gaps = 11/192 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV+IKN+D++++ K +++ F +G+I SCKV + G+S+G+GFV FE + A K++ ++
Sbjct: 184 NVYIKNIDENVNEKELFEMFKKYGTITSCKVMFKDDGSSRGFGFVAFEDPKEAEKAVTEL 243
Query: 172 NGM-LLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKL 220
+G K +V + + ER++EL K + + N+Y+KN + +DE+L
Sbjct: 244 HGKKSPEGKTYYVNRAQKKTERQQELKRKFEQYKIERINRYQGVNLYVKNLDDTIDDERL 303
Query: 221 KEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
+ F +GTI S +VM +DG+S+GFGFV + SPE A KAV NG+ V K LYV AQ+
Sbjct: 304 RREFSAFGTIKSAKVMMDDGRSKGFGFVYFSSPEEATKAVTDMNGRIVGTKPLYVTLAQR 363
Query: 281 KAERTQELKRRF 292
K +R L ++
Sbjct: 364 KKDRKAHLDSQY 375
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 128/229 (55%), Gaps = 18/229 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + +++ FS G+ILS +V + +S GY +V+F+ A +++
Sbjct: 1 MASLYVGDLHSDVTEAMLFEKFSTVGAILSIRVCRHVITRSSLGYAYVNFQNIADAERAL 60
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N +L + I +R+ L + NV+IKN +++ + + F +G
Sbjct: 61 DTMNFDILKGHPM----RIMWSQRDPSLRKSG--VGNVFIKNLDRSIDNKAMYDTFSAFG 114
Query: 229 TITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQE 287
I S +V ++ G S+G+GFV +E+ + A ++++ NG ++GK ++VGR + +R +E
Sbjct: 115 NILSCKVAQDETGNSKGYGFVHFETKQSATQSIEKVNGMLLNGKKVFVGRFVGRNDREKE 174
Query: 288 LKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
L +R ++ N+Y+KN+D++++++ L + F +GTITS K
Sbjct: 175 LGQRAKLY----------TNVYIKNIDENVNEKELFEMFKKYGTITSCK 213
>gi|41053728|ref|NP_957176.1| poly A binding protein, cytoplasmic 1 b [Danio rerio]
gi|37590406|gb|AAH59662.1| Poly A binding protein, cytoplasmic 1 b [Danio rerio]
gi|39645430|gb|AAH63948.1| Poly A binding protein, cytoplasmic 1 b [Danio rerio]
Length = 634
Score = 410 bits (1053), Expect = e-112, Method: Compositional matrix adjust.
Identities = 199/275 (72%), Positives = 230/275 (83%), Gaps = 4/275 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD +KGRP+RIMWSQRDPSLRKSGVGN+FIKNLDKSI
Sbjct: 53 GYAYVNFQQP--ADAERALDTMNFDVIKGRPVRIMWSQRDPSLRKSGVGNIFIKNLDKSI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFSAFG+ILSCKV DE G SKGYGFVHFET+EAA ++IEK+NGMLLN + VF
Sbjct: 111 DNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVF 169
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GK 241
VG+F RKERE ELG +AK FTNVYIKNFGED +D+KLK++F YG S RVM ++ GK
Sbjct: 170 VGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDDKLKDIFSKYGNAMSIRVMTDENGK 229
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
SRGFGFV++E E A++AV NGKE++GK++YVGRAQKK ER ELKR+FE +K +R+
Sbjct: 230 SRGFGFVSFERHEDAQRAVDEMNGKEMNGKLIYVGRAQKKVERQTELKRKFEQMKQDRMT 289
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLYVKNLDD IDDERLRKEF+PFGTITSAK
Sbjct: 290 RYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAK 324
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 88/232 (37%), Positives = 136/232 (58%), Gaps = 16/232 (6%)
Query: 77 TERALDTMNFDALKGRPIRI----MWSQRDPSL--RKSGVGNVFIKNLDKSIDNKAMYDT 130
ERA++ MN L R + + +R+ L R NV+IKN + +D+ + D
Sbjct: 151 AERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDDKLKDI 210
Query: 131 FSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRK 190
FS +G+ +S +V DE G S+G+GFV FE E A ++++++NG +N K+++VG+ +
Sbjct: 211 FSKYGNAMSIRVMTDENGKSRGFGFVSFERHEDAQRAVDEMNGKEMNGKLIYVGRAQKKV 270
Query: 191 EREKELGEKAKLF----------TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDG 240
ER+ EL K + N+Y+KN + +DE+L++ F P+GTITS +VM + G
Sbjct: 271 ERQTELKRKFEQMKQDRMTRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMDGG 330
Query: 241 KSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRF 292
+S+GFGFV + SPE A KAV NG+ V K LYV AQ+K ER L ++
Sbjct: 331 RSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAHLTNQY 382
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 128/236 (54%), Gaps = 17/236 (7%)
Query: 102 DPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFET 160
+PS + ++++ +L + + +Y+ FS G+ILS +V +D S GY +V+F+
Sbjct: 2 NPSAPSYPMASLYVGDLHQDVTEAMLYEKFSPAGAILSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 161 EEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKL 220
A ++++ +N ++ + V I +R+ L + N++IKN + +++ L
Sbjct: 62 PADAERALDTMNFDVIKGRPV----RIMWSQRDPSLRKSG--VGNIFIKNLDKSIDNKAL 115
Query: 221 KEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
+ F +G I S +V+ ++ S+G+GFV +E+ E AE+A++ NG ++ + ++VGR +
Sbjct: 116 YDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKS 175
Query: 281 KAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ ER EL R + N+Y+KN + +DD++L+ F+ +G S +
Sbjct: 176 RKEREAELGARAKEF----------TNVYIKNFGEDMDDDKLKDIFSKYGNAMSIR 221
>gi|193592023|ref|XP_001950415.1| PREDICTED: polyadenylate-binding protein 1-like [Acyrthosiphon
pisum]
Length = 630
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 200/265 (75%), Positives = 228/265 (86%), Gaps = 2/265 (0%)
Query: 74 MLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSA 133
M D E ALDTMNF+ L G P+RIMWSQRDPSLRKSGVGNVFIKNLDK+IDNKAMYDTFSA
Sbjct: 53 MADAECALDTMNFEILNGCPMRIMWSQRDPSLRKSGVGNVFIKNLDKNIDNKAMYDTFSA 112
Query: 134 FGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKERE 193
FG+ILSCKVAQDE G SKGYGFVHF+ E++A +SIEKVNGMLLN K VFVG+F+ RK+RE
Sbjct: 113 FGNILSCKVAQDETGQSKGYGFVHFDMEQSATQSIEKVNGMLLNGKKVFVGRFVGRKDRE 172
Query: 194 KELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYES 252
KELG+KAKLFTNVYIKN E+ ND++L EMFE YG+ITS +VM +DG SRGFGFVA+E
Sbjct: 173 KELGQKAKLFTNVYIKNIDENVNDKELFEMFEKYGSITSCKVMFKDDGSSRGFGFVAFED 232
Query: 253 PEFAEKAVQAWNGKE-VDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVK 311
P+ AEKAV +GKE +GK YVGRAQKKAER ELKR+FE KIER+NRYQG+NLYVK
Sbjct: 233 PKEAEKAVSELHGKESPEGKTYYVGRAQKKAERQNELKRKFEQYKIERMNRYQGINLYVK 292
Query: 312 NLDDSIDDERLRKEFTPFGTITSAK 336
NLDD+IDDE LR+EF+ FGTITSAK
Sbjct: 293 NLDDTIDDEHLRREFSVFGTITSAK 317
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 76/192 (39%), Positives = 118/192 (61%), Gaps = 11/192 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV+IKN+D+++++K +++ F +GSI SCKV + G+S+G+GFV FE + A K++ ++
Sbjct: 184 NVYIKNIDENVNDKELFEMFEKYGSITSCKVMFKDDGSSRGFGFVAFEDPKEAEKAVSEL 243
Query: 172 NGM-LLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKL 220
+G K +VG+ + ER+ EL K + + N+Y+KN + +DE L
Sbjct: 244 HGKESPEGKTYYVGRAQKKAERQNELKRKFEQYKIERMNRYQGINLYVKNLDDTIDDEHL 303
Query: 221 KEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
+ F +GTITS +VM +DG+S+GFGFV + SPE A KAV N + V K LYV AQ+
Sbjct: 304 RREFSVFGTITSAKVMMDDGRSKGFGFVCFSSPEEATKAVTEMNNRIVGTKPLYVALAQR 363
Query: 281 KAERTQELKRRF 292
K ER L ++
Sbjct: 364 KEERKAHLNAQY 375
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 129/229 (56%), Gaps = 18/229 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + +++ FSA G ++S +V +D S GY +V+F+ A ++
Sbjct: 1 MASLYVGDLHSDVTEAMLFEKFSAVGVVVSVRVCRDNITRRSLGYAYVNFQNMADAECAL 60
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N +LN I +R+ L + NV+IKN ++ +++ + + F +G
Sbjct: 61 DTMNFEILNG----CPMRIMWSQRDPSLRKSG--VGNVFIKNLDKNIDNKAMYDTFSAFG 114
Query: 229 TITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQE 287
I S +V ++ G+S+G+GFV ++ + A ++++ NG ++GK ++VGR + +R +E
Sbjct: 115 NILSCKVAQDETGQSKGYGFVHFDMEQSATQSIEKVNGMLLNGKKVFVGRFVGRKDREKE 174
Query: 288 LKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
L ++ ++ N+Y+KN+D++++D+ L + F +G+ITS K
Sbjct: 175 LGQKAKLF----------TNVYIKNIDENVNDKELFEMFEKYGSITSCK 213
>gi|363894957|gb|AEW42987.1| putative polyadenylate-binding protein 1, partial [Haliotis
diversicolor]
Length = 563
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 202/276 (73%), Positives = 232/276 (84%), Gaps = 5/276 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD +KGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI
Sbjct: 53 GYAYVNFQQP--ADAERALDTMNFDTIKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFSAFG+ILSCK+A DE G SKGYGFVHFETEEAA ++IEKVNGMLLN K V+
Sbjct: 111 DNKALYDTFSAFGNILSCKIASDENG-SKGYGFVHFETEEAARQAIEKVNGMLLNGKKVY 169
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GK 241
VGKFIPRKER LG+K K F NVYIKNFG++ +D+K++E+F+P+G I S +VM ++ GK
Sbjct: 170 VGKFIPRKERIALLGDKMKRFNNVYIKNFGDELDDDKIRELFDPFGKIISAKVMTDEIGK 229
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEV-DGKILYVGRAQKKAERTQELKRRFEMLKIERL 300
SRGFGFV+YE PE AEKAV NG E+ GK+LY GRAQKKAER ELK +FE +K+ER+
Sbjct: 230 SRGFGFVSYEEPEAAEKAVDNLNGMELGGGKVLYAGRAQKKAERQAELKDKFEKIKMERI 289
Query: 301 NRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
NRYQGVNLYVKNLDD +DDERLRKEF+ FGTITSA+
Sbjct: 290 NRYQGVNLYVKNLDDVVDDERLRKEFSQFGTITSAR 325
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 80/192 (41%), Positives = 118/192 (61%), Gaps = 11/192 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV+IKN +D+ + + F FG I+S KV DE G S+G+GFV +E EAA K+++ +
Sbjct: 192 NVYIKNFGDELDDDKIRELFDPFGKIISAKVMTDEIGKSRGFGFVSYEEPEAAEKAVDNL 251
Query: 172 NGMLLNS-KIVFVGKFIPRKEREKELG---EKAKL-------FTNVYIKNFGEDFNDEKL 220
NGM L K+++ G+ + ER+ EL EK K+ N+Y+KN + +DE+L
Sbjct: 252 NGMELGGGKVLYAGRAQKKAERQAELKDKFEKIKMERINRYQGVNLYVKNLDDVVDDERL 311
Query: 221 KEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
++ F +GTITS RVM+ G+S+GFGFV + SPE A KAV NG+ + K LYV AQ+
Sbjct: 312 RKEFSQFGTITSARVMSEGGRSKGFGFVCFSSPEEATKAVTEMNGRIIVSKPLYVALAQR 371
Query: 281 KAERTQELKRRF 292
K +R L ++
Sbjct: 372 KEDRRAHLASQY 383
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 129/236 (54%), Gaps = 17/236 (7%)
Query: 102 DPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFET 160
+P+ + ++++ +L + +++ FS G +LS +V +D S GY +V+F+
Sbjct: 2 NPAGPSYPMASLYVGDLHPDVTEAMLFEKFSTAGPVLSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 161 EEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKL 220
A ++++ +N + + + I +R+ L + NV+IKN + +++ L
Sbjct: 62 PADAERALDTMNFDTIKGRPI----RIMWSQRDPSLRKSG--VGNVFIKNLDKSIDNKAL 115
Query: 221 KEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
+ F +G I S ++ +++ S+G+GFV +E+ E A +A++ NG ++GK +YVG+
Sbjct: 116 YDTFSAFGNILSCKIASDENGSKGYGFVHFETEEAARQAIEKVNGMLLNGKKVYVGKFIP 175
Query: 281 KAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ ER L K++R N N+Y+KN D +DD+++R+ F PFG I SAK
Sbjct: 176 RKERIALLGD-----KMKRFN-----NVYIKNFGDELDDDKIRELFDPFGKIISAK 221
>gi|348513241|ref|XP_003444151.1| PREDICTED: polyadenylate-binding protein 1-like isoform 2
[Oreochromis niloticus]
Length = 637
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 198/275 (72%), Positives = 230/275 (83%), Gaps = 4/275 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD +KG+P+RIMWSQRDPSLRKSGVGN+FIKNLDKSI
Sbjct: 53 GYAYVNFQQP--ADAERALDTMNFDVIKGQPVRIMWSQRDPSLRKSGVGNIFIKNLDKSI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFSAFG+ILSCKV DE G SKGYGFVHFET+EAA ++IEK+NGMLLN + VF
Sbjct: 111 DNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVF 169
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GK 241
VG+F RKERE ELG +AK FTNVYIKNFG++ +DEKL+E+F YG S RVM ++ GK
Sbjct: 170 VGRFKSRKEREAELGARAKEFTNVYIKNFGDEMDDEKLRELFSKYGNAMSIRVMTDENGK 229
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
SRGFGFV++E E A+KAV NGKE++GK++YVGRAQKK ER ELKR+FE +K +R+
Sbjct: 230 SRGFGFVSFERHEDAQKAVDEMNGKEMNGKLMYVGRAQKKVERQTELKRKFEQMKQDRMT 289
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLYVKNLDD IDDERLRKEF+PFGTITSAK
Sbjct: 290 RYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAK 324
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 88/232 (37%), Positives = 135/232 (58%), Gaps = 16/232 (6%)
Query: 77 TERALDTMNFDALKGRPIRI----MWSQRDPSL--RKSGVGNVFIKNLDKSIDNKAMYDT 130
ERA++ MN L R + + +R+ L R NV+IKN +D++ + +
Sbjct: 151 AERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGDEMDDEKLREL 210
Query: 131 FSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRK 190
FS +G+ +S +V DE G S+G+GFV FE E A K+++++NG +N K+++VG+ +
Sbjct: 211 FSKYGNAMSIRVMTDENGKSRGFGFVSFERHEDAQKAVDEMNGKEMNGKLMYVGRAQKKV 270
Query: 191 EREKELGEKAKLF----------TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDG 240
ER+ EL K + N+Y+KN + +DE+L++ F P+GTITS +VM G
Sbjct: 271 ERQTELKRKFEQMKQDRMTRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGG 330
Query: 241 KSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRF 292
+S+GFGFV + SPE A KAV NG+ V K LYV AQ+K ER L ++
Sbjct: 331 RSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAHLTNQY 382
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 129/236 (54%), Gaps = 17/236 (7%)
Query: 102 DPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFET 160
+PS + ++++ +L + + +Y+ FS G+ILS +V +D S GY +V+F+
Sbjct: 2 NPSAPSYPMASLYVGDLHQDVTEAMLYEKFSPAGAILSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 161 EEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKL 220
A ++++ +N ++ + V I +R+ L + N++IKN + +++ L
Sbjct: 62 PADAERALDTMNFDVIKGQPV----RIMWSQRDPSLRKSG--VGNIFIKNLDKSIDNKAL 115
Query: 221 KEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
+ F +G I S +V+ ++ S+G+GFV +E+ E AE+A++ NG ++ + ++VGR +
Sbjct: 116 YDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKS 175
Query: 281 KAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ ER EL R + N+Y+KN D +DDE+LR+ F+ +G S +
Sbjct: 176 RKEREAELGARAKEF----------TNVYIKNFGDEMDDEKLRELFSKYGNAMSIR 221
>gi|348513239|ref|XP_003444150.1| PREDICTED: polyadenylate-binding protein 1-like isoform 1
[Oreochromis niloticus]
Length = 634
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 198/275 (72%), Positives = 230/275 (83%), Gaps = 4/275 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD +KG+P+RIMWSQRDPSLRKSGVGN+FIKNLDKSI
Sbjct: 53 GYAYVNFQQP--ADAERALDTMNFDVIKGQPVRIMWSQRDPSLRKSGVGNIFIKNLDKSI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFSAFG+ILSCKV DE G SKGYGFVHFET+EAA ++IEK+NGMLLN + VF
Sbjct: 111 DNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVF 169
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GK 241
VG+F RKERE ELG +AK FTNVYIKNFG++ +DEKL+E+F YG S RVM ++ GK
Sbjct: 170 VGRFKSRKEREAELGARAKEFTNVYIKNFGDEMDDEKLRELFSKYGNAMSIRVMTDENGK 229
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
SRGFGFV++E E A+KAV NGKE++GK++YVGRAQKK ER ELKR+FE +K +R+
Sbjct: 230 SRGFGFVSFERHEDAQKAVDEMNGKEMNGKLMYVGRAQKKVERQTELKRKFEQMKQDRMT 289
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLYVKNLDD IDDERLRKEF+PFGTITSAK
Sbjct: 290 RYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAK 324
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 88/232 (37%), Positives = 135/232 (58%), Gaps = 16/232 (6%)
Query: 77 TERALDTMNFDALKGRPIRI----MWSQRDPSL--RKSGVGNVFIKNLDKSIDNKAMYDT 130
ERA++ MN L R + + +R+ L R NV+IKN +D++ + +
Sbjct: 151 AERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGDEMDDEKLREL 210
Query: 131 FSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRK 190
FS +G+ +S +V DE G S+G+GFV FE E A K+++++NG +N K+++VG+ +
Sbjct: 211 FSKYGNAMSIRVMTDENGKSRGFGFVSFERHEDAQKAVDEMNGKEMNGKLMYVGRAQKKV 270
Query: 191 EREKELGEKAKLF----------TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDG 240
ER+ EL K + N+Y+KN + +DE+L++ F P+GTITS +VM G
Sbjct: 271 ERQTELKRKFEQMKQDRMTRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGG 330
Query: 241 KSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRF 292
+S+GFGFV + SPE A KAV NG+ V K LYV AQ+K ER L ++
Sbjct: 331 RSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAHLTNQY 382
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 129/236 (54%), Gaps = 17/236 (7%)
Query: 102 DPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFET 160
+PS + ++++ +L + + +Y+ FS G+ILS +V +D S GY +V+F+
Sbjct: 2 NPSAPSYPMASLYVGDLHQDVTEAMLYEKFSPAGAILSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 161 EEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKL 220
A ++++ +N ++ + V I +R+ L + N++IKN + +++ L
Sbjct: 62 PADAERALDTMNFDVIKGQPV----RIMWSQRDPSLRKSG--VGNIFIKNLDKSIDNKAL 115
Query: 221 KEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
+ F +G I S +V+ ++ S+G+GFV +E+ E AE+A++ NG ++ + ++VGR +
Sbjct: 116 YDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKS 175
Query: 281 KAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ ER EL R + N+Y+KN D +DDE+LR+ F+ +G S +
Sbjct: 176 RKEREAELGARAKEF----------TNVYIKNFGDEMDDEKLRELFSKYGNAMSIR 221
>gi|410904819|ref|XP_003965889.1| PREDICTED: polyadenylate-binding protein 1-like [Takifugu rubripes]
Length = 636
Score = 407 bits (1046), Expect = e-111, Method: Compositional matrix adjust.
Identities = 199/275 (72%), Positives = 228/275 (82%), Gaps = 4/275 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD +KGRP+RIMWSQRDPSLRKSGVGN+FIKNLDKSI
Sbjct: 53 GYAYVNFQQP--ADAERALDTMNFDVIKGRPLRIMWSQRDPSLRKSGVGNIFIKNLDKSI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFSAFG+ILSCKV DE G SKGYGFVHFET EAA ++IEK+NGMLLN + VF
Sbjct: 111 DNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETHEAAERAIEKMNGMLLNDRKVF 169
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDG-K 241
VG+F RKERE ELG +A+ FTNVYIKNFGED +DEKLKE+F YG S RVM +DG K
Sbjct: 170 VGRFKSRKEREAELGARAREFTNVYIKNFGEDMDDEKLKELFSKYGPALSIRVMTDDGGK 229
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
S+GFGFV++E E A+KAV NGKE++G+ +YVGRAQKK ER ELKR+FE +K +R+
Sbjct: 230 SKGFGFVSFERHEDAQKAVDDMNGKELNGRQVYVGRAQKKGERQNELKRKFEQMKQDRMT 289
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLYVKNLDD +DDERLRKEF+PFGTITSAK
Sbjct: 290 RYQGVNLYVKNLDDGLDDERLRKEFSPFGTITSAK 324
Score = 155 bits (391), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 90/232 (38%), Positives = 133/232 (57%), Gaps = 16/232 (6%)
Query: 77 TERALDTMNFDALKGRPIRI----MWSQRDPSL--RKSGVGNVFIKNLDKSIDNKAMYDT 130
ERA++ MN L R + + +R+ L R NV+IKN + +D++ + +
Sbjct: 151 AERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAREFTNVYIKNFGEDMDDEKLKEL 210
Query: 131 FSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRK 190
FS +G LS +V D+ G SKG+GFV FE E A K+++ +NG LN + V+VG+ +
Sbjct: 211 FSKYGPALSIRVMTDDGGKSKGFGFVSFERHEDAQKAVDDMNGKELNGRQVYVGRAQKKG 270
Query: 191 EREKELGEKAKLF----------TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDG 240
ER+ EL K + N+Y+KN + +DE+L++ F P+GTITS +VM G
Sbjct: 271 ERQNELKRKFEQMKQDRMTRYQGVNLYVKNLDDGLDDERLRKEFSPFGTITSAKVMMEGG 330
Query: 241 KSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRF 292
+S+GFGFV + SPE A KAV NG+ V K LYV AQ+K ER L ++
Sbjct: 331 RSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAHLTNQY 382
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 126/236 (53%), Gaps = 17/236 (7%)
Query: 102 DPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFET 160
+PS + ++++ +L + +Y+ FS G ILS +V +D S GY +V+F+
Sbjct: 2 NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 161 EEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKL 220
A ++++ +N ++ + + I +R+ L + N++IKN + +++ L
Sbjct: 62 PADAERALDTMNFDVIKGRPL----RIMWSQRDPSLRKSG--VGNIFIKNLDKSIDNKAL 115
Query: 221 KEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
+ F +G I S +V+ ++ S+G+GFV +E+ E AE+A++ NG ++ + ++VGR +
Sbjct: 116 YDTFSAFGNILSCKVVCDENGSKGYGFVHFETHEAAERAIEKMNGMLLNDRKVFVGRFKS 175
Query: 281 KAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ ER EL R N+Y+KN + +DDE+L++ F+ +G S +
Sbjct: 176 RKEREAELGARAREF----------TNVYIKNFGEDMDDEKLKELFSKYGPALSIR 221
>gi|72534835|ref|NP_001026846.1| poly A binding protein, cytoplasmic 1 a [Danio rerio]
gi|71534060|gb|AAH99992.1| Poly A binding protein, cytoplasmic 1 a [Danio rerio]
Length = 634
Score = 407 bits (1045), Expect = e-111, Method: Compositional matrix adjust.
Identities = 199/275 (72%), Positives = 228/275 (82%), Gaps = 4/275 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD +KGRP+RIMWSQRDPSLRKSGVGN+FIKNLDKSI
Sbjct: 53 GYAYVNFQQP--ADAERALDTMNFDVIKGRPVRIMWSQRDPSLRKSGVGNIFIKNLDKSI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFSAFG+ILSCKV DE G SKGYGFVHFET EAA ++IEK+NGMLLN + VF
Sbjct: 111 DNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETHEAAERAIEKMNGMLLNDRKVF 169
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GK 241
VG+F RKERE E+G +AK FTNVYIKNFGED +DEKLKE+F YG S RVM +D GK
Sbjct: 170 VGRFKSRKEREAEMGARAKEFTNVYIKNFGEDMDDEKLKEIFCKYGPALSIRVMTDDSGK 229
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
S+GFGFV++E E A++AV NGKE++GK +YVGRAQKK ER ELKR+FE +K +R+
Sbjct: 230 SKGFGFVSFERHEDAQRAVDEMNGKEMNGKQVYVGRAQKKGERQTELKRKFEQMKQDRMT 289
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLYVKNLDD +DDERLRKEF+PFGTITSAK
Sbjct: 290 RYQGVNLYVKNLDDGLDDERLRKEFSPFGTITSAK 324
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 87/232 (37%), Positives = 133/232 (57%), Gaps = 16/232 (6%)
Query: 77 TERALDTMNFDALKGRPIRI----MWSQRDPSL--RKSGVGNVFIKNLDKSIDNKAMYDT 130
ERA++ MN L R + + +R+ + R NV+IKN + +D++ + +
Sbjct: 151 AERAIEKMNGMLLNDRKVFVGRFKSRKEREAEMGARAKEFTNVYIKNFGEDMDDEKLKEI 210
Query: 131 FSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRK 190
F +G LS +V D+ G SKG+GFV FE E A ++++++NG +N K V+VG+ +
Sbjct: 211 FCKYGPALSIRVMTDDSGKSKGFGFVSFERHEDAQRAVDEMNGKEMNGKQVYVGRAQKKG 270
Query: 191 EREKELGEKAKLF----------TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDG 240
ER+ EL K + N+Y+KN + +DE+L++ F P+GTITS +VM G
Sbjct: 271 ERQTELKRKFEQMKQDRMTRYQGVNLYVKNLDDGLDDERLRKEFSPFGTITSAKVMMEGG 330
Query: 241 KSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRF 292
+S+GFGFV + SPE A KAV NG+ V K LYV AQ+K ER L ++
Sbjct: 331 RSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAHLTSQY 382
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 126/236 (53%), Gaps = 17/236 (7%)
Query: 102 DPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQG-NSKGYGFVHFET 160
+PS + ++++ +L + +Y+ FS G ILS +V +D S GY +V+F+
Sbjct: 2 NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMMTRRSLGYAYVNFQQ 61
Query: 161 EEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKL 220
A ++++ +N ++ + V + +R+ L + N++IKN + +++ L
Sbjct: 62 PADAERALDTMNFDVIKGRPVRIM----WSQRDPSLRKSG--VGNIFIKNLDKSIDNKAL 115
Query: 221 KEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
+ F +G I S +V+ ++ S+G+GFV +E+ E AE+A++ NG ++ + ++VGR +
Sbjct: 116 YDTFSAFGNILSCKVVCDENGSKGYGFVHFETHEAAERAIEKMNGMLLNDRKVFVGRFKS 175
Query: 281 KAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ ER E+ R + N+Y+KN + +DDE+L++ F +G S +
Sbjct: 176 RKEREAEMGARAKEF----------TNVYIKNFGEDMDDEKLKEIFCKYGPALSIR 221
>gi|410910966|ref|XP_003968961.1| PREDICTED: polyadenylate-binding protein 1-like [Takifugu rubripes]
Length = 635
Score = 407 bits (1045), Expect = e-111, Method: Compositional matrix adjust.
Identities = 198/275 (72%), Positives = 229/275 (83%), Gaps = 4/275 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD +KGRP+RIMWSQRDPSLRKSGVGN+FIKNLDKSI
Sbjct: 53 GYAYVNFQQP--ADAERALDTMNFDVIKGRPVRIMWSQRDPSLRKSGVGNIFIKNLDKSI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFSAFG+ILSCKV DE G SKGYGFVHFET+EAA ++IEK+NGMLLN + VF
Sbjct: 111 DNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVF 169
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GK 241
VG+F RKERE ELG +A+ FTNVYIKNFG+D ++EKL+++F YG S RVM +D GK
Sbjct: 170 VGRFKSRKEREAELGARAREFTNVYIKNFGDDMDEEKLRDVFNKYGNAMSIRVMTDDSGK 229
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
SRGFGFV++E E A+KAV NGKE++GK +YVGRAQKK ER ELKR+FE +K +R+
Sbjct: 230 SRGFGFVSFERHEDAQKAVDEMNGKEMNGKPIYVGRAQKKVERQAELKRKFEQMKQDRMT 289
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLYVKNLDD IDDERLRKEF+PFGTITSAK
Sbjct: 290 RYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAK 324
Score = 154 bits (388), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 87/232 (37%), Positives = 133/232 (57%), Gaps = 16/232 (6%)
Query: 77 TERALDTMNFDALKGRPIRI----MWSQRDPSL--RKSGVGNVFIKNLDKSIDNKAMYDT 130
ERA++ MN L R + + +R+ L R NV+IKN +D + + D
Sbjct: 151 AERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAREFTNVYIKNFGDDMDEEKLRDV 210
Query: 131 FSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRK 190
F+ +G+ +S +V D+ G S+G+GFV FE E A K+++++NG +N K ++VG+ +
Sbjct: 211 FNKYGNAMSIRVMTDDSGKSRGFGFVSFERHEDAQKAVDEMNGKEMNGKPIYVGRAQKKV 270
Query: 191 EREKELGEKAKLF----------TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDG 240
ER+ EL K + N+Y+KN + +DE+L++ F P+GTITS +VM G
Sbjct: 271 ERQAELKRKFEQMKQDRMTRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMLEGG 330
Query: 241 KSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRF 292
+S+GFGFV + SPE A KAV NG+ V K LYV AQ+K ER L ++
Sbjct: 331 RSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAHLTNQY 382
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 125/236 (52%), Gaps = 17/236 (7%)
Query: 102 DPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFET 160
+PS + ++++ +L + +Y+ FS G+ILS +V +D S GY +V+F+
Sbjct: 2 NPSAASYPMASLYVGDLHTDVTEAMLYEKFSPAGAILSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 161 EEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKL 220
A ++++ +N ++ + V I +R+ L + N++IKN + +++ L
Sbjct: 62 PADAERALDTMNFDVIKGRPV----RIMWSQRDPSLRKSG--VGNIFIKNLDKSIDNKAL 115
Query: 221 KEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
+ F +G I S +V+ ++ S+G+GFV +E+ E AE+A++ NG ++ + ++VGR +
Sbjct: 116 YDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKS 175
Query: 281 KAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ ER EL R N+Y+KN D +D+E+LR F +G S +
Sbjct: 176 RKEREAELGARAREF----------TNVYIKNFGDDMDEEKLRDVFNKYGNAMSIR 221
>gi|348529271|ref|XP_003452137.1| PREDICTED: polyadenylate-binding protein 1-like [Oreochromis
niloticus]
Length = 635
Score = 406 bits (1044), Expect = e-111, Method: Compositional matrix adjust.
Identities = 198/275 (72%), Positives = 228/275 (82%), Gaps = 4/275 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD +KGRP+RIMWSQRDPSLRKSGVGN+FIKNLDKSI
Sbjct: 53 GYAYVNFQQP--ADAERALDTMNFDVIKGRPLRIMWSQRDPSLRKSGVGNIFIKNLDKSI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFSAFG+ILSCKV DE G SKGYGFVHFET EAA ++IEK+NGMLLN + VF
Sbjct: 111 DNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETHEAAERAIEKMNGMLLNDRKVF 169
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GK 241
VG+F RKERE ELG +A+ FTNVYIKNFGED +DEKLKE+F YG S RVM ++ GK
Sbjct: 170 VGRFKSRKEREAELGARAREFTNVYIKNFGEDMDDEKLKELFSKYGPALSIRVMTDESGK 229
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
S+GFGFV++E E A+KAV NGKE++G+ +YVGRAQKK ER ELKR+FE +K +R+
Sbjct: 230 SKGFGFVSFERHEDAQKAVDEMNGKELNGRQVYVGRAQKKGERQNELKRKFEQMKQDRMT 289
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLYVKNLDD +DDERLRKEF+PFGTITSAK
Sbjct: 290 RYQGVNLYVKNLDDGLDDERLRKEFSPFGTITSAK 324
Score = 157 bits (398), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 91/232 (39%), Positives = 134/232 (57%), Gaps = 16/232 (6%)
Query: 77 TERALDTMNFDALKGRPIRI----MWSQRDPSL--RKSGVGNVFIKNLDKSIDNKAMYDT 130
ERA++ MN L R + + +R+ L R NV+IKN + +D++ + +
Sbjct: 151 AERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAREFTNVYIKNFGEDMDDEKLKEL 210
Query: 131 FSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRK 190
FS +G LS +V DE G SKG+GFV FE E A K+++++NG LN + V+VG+ +
Sbjct: 211 FSKYGPALSIRVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGRQVYVGRAQKKG 270
Query: 191 EREKELGEKAKLF----------TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDG 240
ER+ EL K + N+Y+KN + +DE+L++ F P+GTITS +VM G
Sbjct: 271 ERQNELKRKFEQMKQDRMTRYQGVNLYVKNLDDGLDDERLRKEFSPFGTITSAKVMMEGG 330
Query: 241 KSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRF 292
+S+GFGFV + SPE A KAV NG+ V K LYV AQ+K ER L ++
Sbjct: 331 RSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAHLTNQY 382
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 126/236 (53%), Gaps = 17/236 (7%)
Query: 102 DPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFET 160
+PS + ++++ +L + +Y+ FS G ILS +V +D S GY +V+F+
Sbjct: 2 NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 161 EEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKL 220
A ++++ +N ++ + + I +R+ L + N++IKN + +++ L
Sbjct: 62 PADAERALDTMNFDVIKGRPL----RIMWSQRDPSLRKSG--VGNIFIKNLDKSIDNKAL 115
Query: 221 KEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
+ F +G I S +V+ ++ S+G+GFV +E+ E AE+A++ NG ++ + ++VGR +
Sbjct: 116 YDTFSAFGNILSCKVVCDENGSKGYGFVHFETHEAAERAIEKMNGMLLNDRKVFVGRFKS 175
Query: 281 KAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ ER EL R N+Y+KN + +DDE+L++ F+ +G S +
Sbjct: 176 RKEREAELGARAREF----------TNVYIKNFGEDMDDEKLKELFSKYGPALSIR 221
>gi|432907583|ref|XP_004077665.1| PREDICTED: polyadenylate-binding protein 1-like [Oryzias latipes]
Length = 635
Score = 406 bits (1044), Expect = e-111, Method: Compositional matrix adjust.
Identities = 199/275 (72%), Positives = 228/275 (82%), Gaps = 4/275 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD +KGRP+RIMWSQRDPSLRKSGVGN+FIKNLDKSI
Sbjct: 53 GYAYVNFQQP--ADAERALDTMNFDVIKGRPLRIMWSQRDPSLRKSGVGNIFIKNLDKSI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFSAFG+ILSCKV DE G SKGYGFVHFET EAA ++IEK+NGMLLN + VF
Sbjct: 111 DNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETHEAAERAIEKMNGMLLNDRKVF 169
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GK 241
VG+F RKERE ELG +A+ FTNVYIKNFGED +DEKLKE+F YG S RVM +D GK
Sbjct: 170 VGRFKSRKEREAELGARAREFTNVYIKNFGEDMDDEKLKELFGNYGPALSVRVMTDDTGK 229
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
S+GFGFV++E E A+KAV NGKE++G+ +YVGRAQKK ER ELKR+FE +K +R+
Sbjct: 230 SKGFGFVSFERHEDAQKAVDDMNGKELNGRQVYVGRAQKKGERQNELKRKFEQMKQDRMT 289
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLYVKNLDD +DDERLRKEF+PFGTITSAK
Sbjct: 290 RYQGVNLYVKNLDDGLDDERLRKEFSPFGTITSAK 324
Score = 153 bits (387), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 89/232 (38%), Positives = 132/232 (56%), Gaps = 16/232 (6%)
Query: 77 TERALDTMNFDALKGRPIRI----MWSQRDPSL--RKSGVGNVFIKNLDKSIDNKAMYDT 130
ERA++ MN L R + + +R+ L R NV+IKN + +D++ + +
Sbjct: 151 AERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAREFTNVYIKNFGEDMDDEKLKEL 210
Query: 131 FSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRK 190
F +G LS +V D+ G SKG+GFV FE E A K+++ +NG LN + V+VG+ +
Sbjct: 211 FGNYGPALSVRVMTDDTGKSKGFGFVSFERHEDAQKAVDDMNGKELNGRQVYVGRAQKKG 270
Query: 191 EREKELGEKAKLF----------TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDG 240
ER+ EL K + N+Y+KN + +DE+L++ F P+GTITS +VM G
Sbjct: 271 ERQNELKRKFEQMKQDRMTRYQGVNLYVKNLDDGLDDERLRKEFSPFGTITSAKVMMEGG 330
Query: 241 KSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRF 292
+S+GFGFV + SPE A KAV NG+ V K LYV AQ+K ER L ++
Sbjct: 331 RSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAHLTNQY 382
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 125/236 (52%), Gaps = 17/236 (7%)
Query: 102 DPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFET 160
+PS + ++++ +L + +Y+ FS G ILS +V +D S GY +V+F+
Sbjct: 2 NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 161 EEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKL 220
A ++++ +N ++ + + I +R+ L + N++IKN + +++ L
Sbjct: 62 PADAERALDTMNFDVIKGRPL----RIMWSQRDPSLRKSG--VGNIFIKNLDKSIDNKAL 115
Query: 221 KEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
+ F +G I S +V+ ++ S+G+GFV +E+ E AE+A++ NG ++ + ++VGR +
Sbjct: 116 YDTFSAFGNILSCKVVCDENGSKGYGFVHFETHEAAERAIEKMNGMLLNDRKVFVGRFKS 175
Query: 281 KAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ ER EL R N+Y+KN + +DDE+L++ F +G S +
Sbjct: 176 RKEREAELGARAREF----------TNVYIKNFGEDMDDEKLKELFGNYGPALSVR 221
>gi|47219550|emb|CAG09904.1| unnamed protein product [Tetraodon nigroviridis]
Length = 623
Score = 406 bits (1044), Expect = e-111, Method: Compositional matrix adjust.
Identities = 198/275 (72%), Positives = 231/275 (84%), Gaps = 4/275 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD +KG+PIRIMWSQRDPSLRKSGVGNVFIKNLDKSI
Sbjct: 53 GYAYVNFSQP--ADAERALDTMNFDVVKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFSAFG+ILSCKV DE G SKGY FVHFET++AA+++IEK+NGMLLN + VF
Sbjct: 111 DNKALYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQDAADRAIEKMNGMLLNDRKVF 169
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GK 241
VG+F RKERE ELG KAK FTNVYIKNFG+D NDE+LKE+F+ YG S +VM + GK
Sbjct: 170 VGRFKSRKEREAELGAKAKEFTNVYIKNFGDDMNDERLKELFDKYGKTLSVKVMTDPTGK 229
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
SRGFGF++YE E A KAV+ NG E++GK ++VGRAQKK ER ELKR+FEMLK ER++
Sbjct: 230 SRGFGFISYEKHEDANKAVEDMNGTELNGKTVFVGRAQKKMERQAELKRKFEMLKQERIS 289
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLY+KNLDD+IDDE+LRKEF+PFG+ITSAK
Sbjct: 290 RYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAK 324
Score = 157 bits (397), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 81/191 (42%), Positives = 117/191 (61%), Gaps = 10/191 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV+IKN ++++ + + F +G LS KV D G S+G+GF+ +E E ANK++E +
Sbjct: 192 NVYIKNFGDDMNDERLKELFDKYGKTLSVKVMTDPTGKSRGFGFISYEKHEDANKAVEDM 251
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKLK 221
NG LN K VFVG+ + ER+ EL K ++ N+YIKN + +DEKL+
Sbjct: 252 NGTELNGKTVFVGRAQKKMERQAELKRKFEMLKQERISRYQGVNLYIKNLDDTIDDEKLR 311
Query: 222 EMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKK 281
+ F P+G+ITS +VM +G+S+GFGFV + SPE A KAV NG+ V K LYV AQ+K
Sbjct: 312 KEFSPFGSITSAKVMLEEGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRK 371
Query: 282 AERTQELKRRF 292
ER L ++
Sbjct: 372 EERKAHLTNQY 382
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 122/228 (53%), Gaps = 17/228 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L I +Y+ FS G +LS +V +D S GY +V+F A +++
Sbjct: 10 MASLYVGDLHPDITEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFSQPADAERAL 69
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N ++ K + I +R+ L + NV+IKN + +++ L + F +G
Sbjct: 70 DTMNFDVVKGKPI----RIMWSQRDPSLRKSG--VGNVFIKNLDKSIDNKALYDTFSAFG 123
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S +V+ ++ S+G+ FV +E+ + A++A++ NG ++ + ++VGR + + ER EL
Sbjct: 124 NILSCKVVCDENGSKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSRKEREAEL 183
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ + + N+Y+KN D ++DERL++ F +G S K
Sbjct: 184 GAKAK----------EFTNVYIKNFGDDMNDERLKELFDKYGKTLSVK 221
>gi|47217896|emb|CAG05018.1| unnamed protein product [Tetraodon nigroviridis]
Length = 558
Score = 406 bits (1043), Expect = e-111, Method: Compositional matrix adjust.
Identities = 199/275 (72%), Positives = 228/275 (82%), Gaps = 4/275 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD +KGRP+RIMWSQRDPSLRKSGVGN+FIKNLDKSI
Sbjct: 40 GYAYVNFQQP--ADAERALDTMNFDVIKGRPLRIMWSQRDPSLRKSGVGNIFIKNLDKSI 97
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFSAFG+ILSCKV DE G SKGYGFVHFET EAA ++IEK+NGMLLN + VF
Sbjct: 98 DNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETHEAAERAIEKMNGMLLNDRKVF 156
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GK 241
VG+F RKERE ELG +A+ FTNVYIKNFGED +DEKLKE+F YG S RVM +D GK
Sbjct: 157 VGRFKSRKEREAELGARAREFTNVYIKNFGEDMDDEKLKELFSKYGPALSIRVMTDDSGK 216
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
S+GFGFV++E E A+KAV NGKE++G+ +YVGRAQKK ER ELKR+FE +K +R+
Sbjct: 217 SKGFGFVSFERHEDAQKAVDDMNGKELNGRQVYVGRAQKKGERQNELKRKFEQMKQDRMT 276
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLYVKNLDD +DDERLRKEF+PFGTITSAK
Sbjct: 277 RYQGVNLYVKNLDDGLDDERLRKEFSPFGTITSAK 311
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 90/232 (38%), Positives = 133/232 (57%), Gaps = 16/232 (6%)
Query: 77 TERALDTMNFDALKGRPIRI----MWSQRDPSL--RKSGVGNVFIKNLDKSIDNKAMYDT 130
ERA++ MN L R + + +R+ L R NV+IKN + +D++ + +
Sbjct: 138 AERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAREFTNVYIKNFGEDMDDEKLKEL 197
Query: 131 FSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRK 190
FS +G LS +V D+ G SKG+GFV FE E A K+++ +NG LN + V+VG+ +
Sbjct: 198 FSKYGPALSIRVMTDDSGKSKGFGFVSFERHEDAQKAVDDMNGKELNGRQVYVGRAQKKG 257
Query: 191 EREKELGEKAKLF----------TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDG 240
ER+ EL K + N+Y+KN + +DE+L++ F P+GTITS +VM G
Sbjct: 258 ERQNELKRKFEQMKQDRMTRYQGVNLYVKNLDDGLDDERLRKEFSPFGTITSAKVMMEGG 317
Query: 241 KSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRF 292
+S+GFGFV + SPE A KAV NG+ V K LYV AQ+K ER L ++
Sbjct: 318 RSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAHLTNQY 369
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 112/207 (54%), Gaps = 17/207 (8%)
Query: 131 FSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPR 189
FS G ILS +V +D S GY +V+F+ A ++++ +N ++ + + I
Sbjct: 18 FSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGRPL----RIMW 73
Query: 190 KEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDGKSRGFGFVA 249
+R+ L + N++IKN + +++ L + F +G I S +V+ ++ S+G+GFV
Sbjct: 74 SQRDPSLRKSG--VGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVH 131
Query: 250 YESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLY 309
+E+ E AE+A++ NG ++ + ++VGR + + ER EL R N+Y
Sbjct: 132 FETHEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAREF----------TNVY 181
Query: 310 VKNLDDSIDDERLRKEFTPFGTITSAK 336
+KN + +DDE+L++ F+ +G S +
Sbjct: 182 IKNFGEDMDDEKLKELFSKYGPALSIR 208
>gi|224081795|ref|XP_002196994.1| PREDICTED: polyadenylate-binding protein 4 [Taeniopygia guttata]
Length = 629
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 199/275 (72%), Positives = 232/275 (84%), Gaps = 4/275 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD +KG+PIRIMWSQRDPSLRKSGVGNVFIKNLDKSI
Sbjct: 53 GYAYVNFQQP--ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFSAFG+ILSCKV DE G SKGY FVHFET++AA+++IEK+NGMLLN + VF
Sbjct: 111 DNKALYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQDAADRAIEKMNGMLLNDRKVF 169
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GK 241
VG+F RKERE ELG KAK FTNVYIKNFG+D +DE+LKE+F YG S +VM + GK
Sbjct: 170 VGRFKSRKEREAELGAKAKEFTNVYIKNFGDDMDDERLKELFGKYGKTLSVKVMTDPTGK 229
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
S+GFGFV++E E A KAV+ NGK+++GK+L+VGRAQKKAER ELKRRFE LK ERL+
Sbjct: 230 SKGFGFVSFEKHEEANKAVEEMNGKDINGKMLFVGRAQKKAERQAELKRRFEQLKQERLS 289
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLY+KNLDD+IDDE+LRKEF+PFG+ITSAK
Sbjct: 290 RYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAK 324
Score = 160 bits (404), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 83/191 (43%), Positives = 118/191 (61%), Gaps = 10/191 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV+IKN +D++ + + F +G LS KV D G SKG+GFV FE E ANK++E++
Sbjct: 192 NVYIKNFGDDMDDERLKELFGKYGKTLSVKVMTDPTGKSKGFGFVSFEKHEEANKAVEEM 251
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKLK 221
NG +N K++FVG+ + ER+ EL + + N+YIKN + +DEKL+
Sbjct: 252 NGKDINGKMLFVGRAQKKAERQAELKRRFEQLKQERLSRYQGVNLYIKNLDDTIDDEKLR 311
Query: 222 EMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKK 281
+ F P+G+ITS +VM DG+S+GFGFV + SPE A KAV NG+ V K LYV AQ+K
Sbjct: 312 KEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRK 371
Query: 282 AERTQELKRRF 292
ER L ++
Sbjct: 372 EERKAHLTNQY 382
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 122/228 (53%), Gaps = 17/228 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L I +Y+ FS G +LS +V +D S GY +V+F+ A +++
Sbjct: 10 MASLYVGDLHPDITEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERAL 69
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N ++ K + I +R+ L + NV+IKN + +++ L + F +G
Sbjct: 70 DTMNFDVIKGKPI----RIMWSQRDPSLRKSG--VGNVFIKNLDKSIDNKALYDTFSAFG 123
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S +V+ ++ S+G+ FV +E+ + A++A++ NG ++ + ++VGR + + ER EL
Sbjct: 124 NILSCKVVCDENGSKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSRKEREAEL 183
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ + N+Y+KN D +DDERL++ F +G S K
Sbjct: 184 GAKAKEF----------TNVYIKNFGDDMDDERLKELFGKYGKTLSVK 221
>gi|52346016|ref|NP_001005051.1| poly(A) binding protein, cytoplasmic 1 [Xenopus (Silurana)
tropicalis]
gi|49903495|gb|AAH76931.1| polyadenylate-binding protein 1 [Xenopus (Silurana) tropicalis]
Length = 634
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 198/275 (72%), Positives = 229/275 (83%), Gaps = 4/275 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD +KG+P+RIMWSQRDPSLRKSGVGN+FIKNLDKSI
Sbjct: 53 GYAYVNFQQP--ADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFSAFG+ILSCKV DE G SKGYGFVHFET+EAA ++I+K+NGMLLN + VF
Sbjct: 111 DNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIDKMNGMLLNDRKVF 169
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GK 241
VG+F RKERE ELG +AK FTNVYIKNFGED +DE+LKEMF YG S +VM +D GK
Sbjct: 170 VGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKEMFGKYGPALSVKVMTDDNGK 229
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
S+GFGFV++E E A+KAV NGK+++GK +YVGRAQKK ER ELKR+FE +K +R+
Sbjct: 230 SKGFGFVSFERHEDAQKAVDDMNGKDMNGKAIYVGRAQKKVERQTELKRKFEQMKQDRIT 289
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLYVKNLDD IDDERLRKEF+PFGTITSAK
Sbjct: 290 RYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAK 324
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 90/232 (38%), Positives = 132/232 (56%), Gaps = 16/232 (6%)
Query: 77 TERALDTMNFDALKGRPIRI----MWSQRDPSL--RKSGVGNVFIKNLDKSIDNKAMYDT 130
ERA+D MN L R + + +R+ L R NV+IKN + +D++ + +
Sbjct: 151 AERAIDKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKEM 210
Query: 131 FSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRK 190
F +G LS KV D+ G SKG+GFV FE E A K+++ +NG +N K ++VG+ +
Sbjct: 211 FGKYGPALSVKVMTDDNGKSKGFGFVSFERHEDAQKAVDDMNGKDMNGKAIYVGRAQKKV 270
Query: 191 EREKELGEKAKLF----------TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDG 240
ER+ EL K + N+Y+KN + +DE+L++ F P+GTITS +VM G
Sbjct: 271 ERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGG 330
Query: 241 KSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRF 292
+S+GFGFV + SPE A KAV NG+ V K LYV AQ+K ER L ++
Sbjct: 331 RSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAHLTNQY 382
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 125/236 (52%), Gaps = 17/236 (7%)
Query: 102 DPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFET 160
+PS + ++++ +L + +Y+ FS G ILS +V +D S GY +V+F+
Sbjct: 2 NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 161 EEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKL 220
A ++++ +N ++ K V + +R+ L + N++IKN + +++ L
Sbjct: 62 PADAERALDTMNFDVIKGKPVRIM----WSQRDPSLRKSG--VGNIFIKNLDKSIDNKAL 115
Query: 221 KEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
+ F +G I S +V+ ++ S+G+GFV +E+ E AE+A+ NG ++ + ++VGR +
Sbjct: 116 YDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIDKMNGMLLNDRKVFVGRFKS 175
Query: 281 KAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ ER EL R + N+Y+KN + +DDERL++ F +G S K
Sbjct: 176 RKEREAELGARAKEF----------TNVYIKNFGEDMDDERLKEMFGKYGPALSVK 221
>gi|410263252|gb|JAA19592.1| poly(A) binding protein, cytoplasmic 4 (inducible form) [Pan
troglodytes]
Length = 631
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 199/275 (72%), Positives = 230/275 (83%), Gaps = 4/275 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD +KG+PIRIMWSQRDPSLRKSGVGNVFIKNLDKSI
Sbjct: 53 GYAYVNFQQP--ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFSAFG+ILSCKV DE G SKGY FVHFET+EAA+K+IEK+NGMLLN + VF
Sbjct: 111 DNKALYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVF 169
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGK 241
VG+F RKERE ELG KAK FTNVYIKNFGE+ +DE LKE+F +G S +VM + +GK
Sbjct: 170 VGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGK 229
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
S+GFGFV+YE E A KAV+ NGKE+ GKI++VGRAQKK ER ELKR+FE LK ER++
Sbjct: 230 SKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERIS 289
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLY+KNLDD+IDDE+LRKEF+PFG+ITSAK
Sbjct: 290 RYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAK 324
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 85/191 (44%), Positives = 122/191 (63%), Gaps = 10/191 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV+IKN + +D++++ + FS FG LS KV +D G SKG+GFV +E E ANK++E++
Sbjct: 192 NVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEM 251
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKLK 221
NG ++ KI+FVG+ + ER+ EL K + N+YIKN + +DEKL+
Sbjct: 252 NGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLR 311
Query: 222 EMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKK 281
+ F P+G+ITS +VM DG+S+GFGFV + SPE A KAV NG+ V K LYV AQ+K
Sbjct: 312 KEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRK 371
Query: 282 AERTQELKRRF 292
ER L ++
Sbjct: 372 EERKAHLTNQY 382
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 122/228 (53%), Gaps = 17/228 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + +Y+ FS G +LS +V +D S GY +V+F+ A +++
Sbjct: 10 MASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERAL 69
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N ++ K + I +R+ L + NV+IKN + +++ L + F +G
Sbjct: 70 DTMNFDVIKGKPI----RIMWSQRDPSLRKSG--VGNVFIKNLDKSIDNKALYDTFSAFG 123
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S +V+ ++ S+G+ FV +E+ E A+KA++ NG ++ + ++VGR + + ER EL
Sbjct: 124 NILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAEL 183
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ + N+Y+KN + +DDE L++ F+ FG S K
Sbjct: 184 GAKAKEF----------TNVYIKNFGEEVDDESLKELFSQFGKTLSVK 221
>gi|64970|emb|CAA40721.1| polyA binding protein [Xenopus laevis]
Length = 633
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 198/275 (72%), Positives = 228/275 (82%), Gaps = 4/275 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD +KGRP+RIMWSQRDPSLRKSGVGN+FIKNLDKSI
Sbjct: 53 GYAYVNFQQP--ADAERALDTMNFDVIKGRPVRIMWSQRDPSLRKSGVGNIFIKNLDKSI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFSAFG+ILSCKV DE G SKGYGFVHFET+EAA ++I+K+NGMLLN + VF
Sbjct: 111 DNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIDKMNGMLLNDRKVF 169
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GK 241
VG+F RKERE ELG +AK FTNVYIKNFG+D NDE+LKEMF YG S +VM +D GK
Sbjct: 170 VGRFKSRKEREAELGARAKEFTNVYIKNFGDDMNDERLKEMFGKYGPALSVKVMTDDNGK 229
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
S+GFGFV++E E A+KAV NGK+++GK ++VGRAQKK ER ELKR+FE +K +R+
Sbjct: 230 SKGFGFVSFERHEDAQKAVDEMNGKDMNGKSMFVGRAQKKVERQTELKRKFEQMKQDRIT 289
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLYVKNLDD IDDERLRKEF PFGTITSAK
Sbjct: 290 RYQGVNLYVKNLDDGIDDERLRKEFLPFGTITSAK 324
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 90/232 (38%), Positives = 132/232 (56%), Gaps = 16/232 (6%)
Query: 77 TERALDTMNFDALKGRPIRI----MWSQRDPSL--RKSGVGNVFIKNLDKSIDNKAMYDT 130
ERA+D MN L R + + +R+ L R NV+IKN ++++ + +
Sbjct: 151 AERAIDKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGDDMNDERLKEM 210
Query: 131 FSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRK 190
F +G LS KV D+ G SKG+GFV FE E A K+++++NG +N K +FVG+ +
Sbjct: 211 FGKYGPALSVKVMTDDNGKSKGFGFVSFERHEDAQKAVDEMNGKDMNGKSMFVGRAQKKV 270
Query: 191 EREKELGEKAKLF----------TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDG 240
ER+ EL K + N+Y+KN + +DE+L++ F P+GTITS +VM G
Sbjct: 271 ERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFLPFGTITSAKVMMEGG 330
Query: 241 KSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRF 292
+S+GFGFV + SPE A KAV NG+ V K LYV AQ+K ER L ++
Sbjct: 331 RSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAHLTNQY 382
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 126/236 (53%), Gaps = 17/236 (7%)
Query: 102 DPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFET 160
+PS + ++++ +L + + +Y+ FS G ILS +V +D S GY +V+F+
Sbjct: 2 NPSAPSYPMASLYVGDLHQDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 161 EEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKL 220
A ++++ +N ++ + V I +R+ L + N++IKN + +++ L
Sbjct: 62 PADAERALDTMNFDVIKGRPV----RIMWSQRDPSLRKSG--VGNIFIKNLDKSIDNKAL 115
Query: 221 KEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
+ F +G I S +V+ ++ S+G+GFV +E+ E AE+A+ NG ++ + ++VGR +
Sbjct: 116 YDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIDKMNGMLLNDRKVFVGRFKS 175
Query: 281 KAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ ER EL R + N+Y+KN D ++DERL++ F +G S K
Sbjct: 176 RKEREAELGARAKEF----------TNVYIKNFGDDMNDERLKEMFGKYGPALSVK 221
>gi|403292062|ref|XP_003937076.1| PREDICTED: polyadenylate-binding protein 4 isoform 3 [Saimiri
boliviensis boliviensis]
Length = 630
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 199/275 (72%), Positives = 230/275 (83%), Gaps = 4/275 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD +KG+PIRIMWSQRDPSLRKSGVGNVFIKNLDKSI
Sbjct: 53 GYAYVNFQQP--ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFSAFG+ILSCKV DE G SKGY FVHFET+EAA+K+IEK+NGMLLN + VF
Sbjct: 111 DNKALYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVF 169
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGK 241
VG+F RKERE ELG KAK FTNVYIKNFGE+ +DE LKE+F +G S +VM + +GK
Sbjct: 170 VGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGK 229
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
S+GFGFV+YE E A KAV+ NGKE+ GKI++VGRAQKK ER ELKR+FE LK ER++
Sbjct: 230 SKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERIS 289
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLY+KNLDD+IDDE+LRKEF+PFG+ITSAK
Sbjct: 290 RYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAK 324
Score = 165 bits (418), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 85/191 (44%), Positives = 122/191 (63%), Gaps = 10/191 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV+IKN + +D++++ + FS FG LS KV +D G SKG+GFV +E E ANK++E++
Sbjct: 192 NVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEM 251
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKLK 221
NG ++ KI+FVG+ + ER+ EL K + N+YIKN + +DEKL+
Sbjct: 252 NGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLR 311
Query: 222 EMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKK 281
+ F P+G+ITS +VM DG+S+GFGFV + SPE A KAV NG+ V K LYV AQ+K
Sbjct: 312 KEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRK 371
Query: 282 AERTQELKRRF 292
ER L ++
Sbjct: 372 EERKAHLTNQY 382
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 122/228 (53%), Gaps = 17/228 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + +Y+ FS G +LS +V +D S GY +V+F+ A +++
Sbjct: 10 MASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERAL 69
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N ++ K + I +R+ L + NV+IKN + +++ L + F +G
Sbjct: 70 DTMNFDVIKGKPI----RIMWSQRDPSLRKSG--VGNVFIKNLDKSIDNKALYDTFSAFG 123
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S +V+ ++ S+G+ FV +E+ E A+KA++ NG ++ + ++VGR + + ER EL
Sbjct: 124 NILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAEL 183
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ + N+Y+KN + +DDE L++ F+ FG S K
Sbjct: 184 GAKAKEF----------TNVYIKNFGEEVDDESLKELFSQFGKTLSVK 221
>gi|403292060|ref|XP_003937075.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 643
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 199/275 (72%), Positives = 230/275 (83%), Gaps = 4/275 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD +KG+PIRIMWSQRDPSLRKSGVGNVFIKNLDKSI
Sbjct: 53 GYAYVNFQQP--ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFSAFG+ILSCKV DE G SKGY FVHFET+EAA+K+IEK+NGMLLN + VF
Sbjct: 111 DNKALYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVF 169
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGK 241
VG+F RKERE ELG KAK FTNVYIKNFGE+ +DE LKE+F +G S +VM + +GK
Sbjct: 170 VGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGK 229
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
S+GFGFV+YE E A KAV+ NGKE+ GKI++VGRAQKK ER ELKR+FE LK ER++
Sbjct: 230 SKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERIS 289
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLY+KNLDD+IDDE+LRKEF+PFG+ITSAK
Sbjct: 290 RYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAK 324
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 85/191 (44%), Positives = 122/191 (63%), Gaps = 10/191 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV+IKN + +D++++ + FS FG LS KV +D G SKG+GFV +E E ANK++E++
Sbjct: 192 NVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEM 251
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKLK 221
NG ++ KI+FVG+ + ER+ EL K + N+YIKN + +DEKL+
Sbjct: 252 NGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLR 311
Query: 222 EMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKK 281
+ F P+G+ITS +VM DG+S+GFGFV + SPE A KAV NG+ V K LYV AQ+K
Sbjct: 312 KEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRK 371
Query: 282 AERTQELKRRF 292
ER L ++
Sbjct: 372 EERKAHLTNQY 382
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 122/228 (53%), Gaps = 17/228 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + +Y+ FS G +LS +V +D S GY +V+F+ A +++
Sbjct: 10 MASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERAL 69
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N ++ K + I +R+ L + NV+IKN + +++ L + F +G
Sbjct: 70 DTMNFDVIKGKPI----RIMWSQRDPSLRKSG--VGNVFIKNLDKSIDNKALYDTFSAFG 123
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S +V+ ++ S+G+ FV +E+ E A+KA++ NG ++ + ++VGR + + ER EL
Sbjct: 124 NILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAEL 183
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ + N+Y+KN + +DDE L++ F+ FG S K
Sbjct: 184 GAKAKEF----------TNVYIKNFGEEVDDESLKELFSQFGKTLSVK 221
>gi|208431833|ref|NP_001129125.1| polyadenylate-binding protein 4 isoform 1 [Homo sapiens]
gi|332808508|ref|XP_513344.3| PREDICTED: polyadenylate-binding protein 4 isoform 3 [Pan
troglodytes]
gi|395730714|ref|XP_002811047.2| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Pongo abelii]
gi|397488842|ref|XP_003815452.1| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Pan paniscus]
gi|426329062|ref|XP_004025563.1| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Gorilla
gorilla gorilla]
gi|66267552|gb|AAH94755.1| PABPC4 protein [Homo sapiens]
gi|119627668|gb|EAX07263.1| poly(A) binding protein, cytoplasmic 4 (inducible form), isoform
CRA_c [Homo sapiens]
gi|410227598|gb|JAA11018.1| poly(A) binding protein, cytoplasmic 4 (inducible form) [Pan
troglodytes]
gi|410227604|gb|JAA11021.1| poly(A) binding protein, cytoplasmic 4 (inducible form) [Pan
troglodytes]
Length = 660
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 199/275 (72%), Positives = 230/275 (83%), Gaps = 4/275 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD +KG+PIRIMWSQRDPSLRKSGVGNVFIKNLDKSI
Sbjct: 53 GYAYVNFQQP--ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFSAFG+ILSCKV DE G SKGY FVHFET+EAA+K+IEK+NGMLLN + VF
Sbjct: 111 DNKALYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVF 169
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGK 241
VG+F RKERE ELG KAK FTNVYIKNFGE+ +DE LKE+F +G S +VM + +GK
Sbjct: 170 VGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGK 229
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
S+GFGFV+YE E A KAV+ NGKE+ GKI++VGRAQKK ER ELKR+FE LK ER++
Sbjct: 230 SKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERIS 289
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLY+KNLDD+IDDE+LRKEF+PFG+ITSAK
Sbjct: 290 RYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAK 324
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 85/191 (44%), Positives = 122/191 (63%), Gaps = 10/191 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV+IKN + +D++++ + FS FG LS KV +D G SKG+GFV +E E ANK++E++
Sbjct: 192 NVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEM 251
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKLK 221
NG ++ KI+FVG+ + ER+ EL K + N+YIKN + +DEKL+
Sbjct: 252 NGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLR 311
Query: 222 EMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKK 281
+ F P+G+ITS +VM DG+S+GFGFV + SPE A KAV NG+ V K LYV AQ+K
Sbjct: 312 KEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRK 371
Query: 282 AERTQELKRRF 292
ER L ++
Sbjct: 372 EERKAHLTNQY 382
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 122/228 (53%), Gaps = 17/228 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + +Y+ FS G +LS +V +D S GY +V+F+ A +++
Sbjct: 10 MASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERAL 69
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N ++ K + I +R+ L + NV+IKN + +++ L + F +G
Sbjct: 70 DTMNFDVIKGKPI----RIMWSQRDPSLRKSG--VGNVFIKNLDKSIDNKALYDTFSAFG 123
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S +V+ ++ S+G+ FV +E+ E A+KA++ NG ++ + ++VGR + + ER EL
Sbjct: 124 NILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAEL 183
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ + N+Y+KN + +DDE L++ F+ FG S K
Sbjct: 184 GAKAKEF----------TNVYIKNFGEEVDDESLKELFSQFGKTLSVK 221
>gi|4504715|ref|NP_003810.1| polyadenylate-binding protein 4 isoform 2 [Homo sapiens]
gi|332808510|ref|XP_003308042.1| PREDICTED: polyadenylate-binding protein 4 [Pan troglodytes]
gi|395730716|ref|XP_003775777.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Pongo abelii]
gi|397488844|ref|XP_003815453.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Pan paniscus]
gi|426329066|ref|XP_004025565.1| PREDICTED: polyadenylate-binding protein 4 isoform 3 [Gorilla
gorilla gorilla]
gi|12229875|sp|Q13310.1|PABP4_HUMAN RecName: Full=Polyadenylate-binding protein 4; Short=PABP-4;
Short=Poly(A)-binding protein 4; AltName:
Full=Activated-platelet protein 1; Short=APP-1; AltName:
Full=Inducible poly(A)-binding protein; Short=iPABP
gi|1163177|gb|AAC50350.1| inducible poly(A)-binding protein [Homo sapiens]
gi|2801403|gb|AAB97309.1| polyadenylate binding protein [Homo sapiens]
gi|119627669|gb|EAX07264.1| poly(A) binding protein, cytoplasmic 4 (inducible form), isoform
CRA_d [Homo sapiens]
gi|410227600|gb|JAA11019.1| poly(A) binding protein, cytoplasmic 4 (inducible form) [Pan
troglodytes]
gi|1585757|prf||2201474A inducible poly(A)-binding protein
Length = 644
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 199/275 (72%), Positives = 230/275 (83%), Gaps = 4/275 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD +KG+PIRIMWSQRDPSLRKSGVGNVFIKNLDKSI
Sbjct: 53 GYAYVNFQQP--ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFSAFG+ILSCKV DE G SKGY FVHFET+EAA+K+IEK+NGMLLN + VF
Sbjct: 111 DNKALYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVF 169
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGK 241
VG+F RKERE ELG KAK FTNVYIKNFGE+ +DE LKE+F +G S +VM + +GK
Sbjct: 170 VGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGK 229
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
S+GFGFV+YE E A KAV+ NGKE+ GKI++VGRAQKK ER ELKR+FE LK ER++
Sbjct: 230 SKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERIS 289
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLY+KNLDD+IDDE+LRKEF+PFG+ITSAK
Sbjct: 290 RYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAK 324
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 85/191 (44%), Positives = 122/191 (63%), Gaps = 10/191 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV+IKN + +D++++ + FS FG LS KV +D G SKG+GFV +E E ANK++E++
Sbjct: 192 NVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEM 251
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKLK 221
NG ++ KI+FVG+ + ER+ EL K + N+YIKN + +DEKL+
Sbjct: 252 NGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLR 311
Query: 222 EMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKK 281
+ F P+G+ITS +VM DG+S+GFGFV + SPE A KAV NG+ V K LYV AQ+K
Sbjct: 312 KEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRK 371
Query: 282 AERTQELKRRF 292
ER L ++
Sbjct: 372 EERKAHLTNQY 382
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 122/228 (53%), Gaps = 17/228 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + +Y+ FS G +LS +V +D S GY +V+F+ A +++
Sbjct: 10 MASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERAL 69
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N ++ K + I +R+ L + NV+IKN + +++ L + F +G
Sbjct: 70 DTMNFDVIKGKPI----RIMWSQRDPSLRKSG--VGNVFIKNLDKSIDNKALYDTFSAFG 123
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S +V+ ++ S+G+ FV +E+ E A+KA++ NG ++ + ++VGR + + ER EL
Sbjct: 124 NILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAEL 183
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ + N+Y+KN + +DDE L++ F+ FG S K
Sbjct: 184 GAKAKEF----------TNVYIKNFGEEVDDESLKELFSQFGKTLSVK 221
>gi|403292058|ref|XP_003937074.1| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Saimiri
boliviensis boliviensis]
Length = 659
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 199/275 (72%), Positives = 230/275 (83%), Gaps = 4/275 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD +KG+PIRIMWSQRDPSLRKSGVGNVFIKNLDKSI
Sbjct: 53 GYAYVNFQQP--ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFSAFG+ILSCKV DE G SKGY FVHFET+EAA+K+IEK+NGMLLN + VF
Sbjct: 111 DNKALYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVF 169
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGK 241
VG+F RKERE ELG KAK FTNVYIKNFGE+ +DE LKE+F +G S +VM + +GK
Sbjct: 170 VGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGK 229
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
S+GFGFV+YE E A KAV+ NGKE+ GKI++VGRAQKK ER ELKR+FE LK ER++
Sbjct: 230 SKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERIS 289
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLY+KNLDD+IDDE+LRKEF+PFG+ITSAK
Sbjct: 290 RYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAK 324
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 85/191 (44%), Positives = 122/191 (63%), Gaps = 10/191 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV+IKN + +D++++ + FS FG LS KV +D G SKG+GFV +E E ANK++E++
Sbjct: 192 NVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEM 251
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKLK 221
NG ++ KI+FVG+ + ER+ EL K + N+YIKN + +DEKL+
Sbjct: 252 NGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLR 311
Query: 222 EMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKK 281
+ F P+G+ITS +VM DG+S+GFGFV + SPE A KAV NG+ V K LYV AQ+K
Sbjct: 312 KEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRK 371
Query: 282 AERTQELKRRF 292
ER L ++
Sbjct: 372 EERKAHLTNQY 382
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 122/228 (53%), Gaps = 17/228 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + +Y+ FS G +LS +V +D S GY +V+F+ A +++
Sbjct: 10 MASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERAL 69
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N ++ K + I +R+ L + NV+IKN + +++ L + F +G
Sbjct: 70 DTMNFDVIKGKPI----RIMWSQRDPSLRKSG--VGNVFIKNLDKSIDNKALYDTFSAFG 123
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S +V+ ++ S+G+ FV +E+ E A+KA++ NG ++ + ++VGR + + ER EL
Sbjct: 124 NILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAEL 183
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ + N+Y+KN + +DDE L++ F+ FG S K
Sbjct: 184 GAKAKEF----------TNVYIKNFGEEVDDESLKELFSQFGKTLSVK 221
>gi|119627673|gb|EAX07268.1| poly(A) binding protein, cytoplasmic 4 (inducible form), isoform
CRA_h [Homo sapiens]
Length = 661
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 199/275 (72%), Positives = 230/275 (83%), Gaps = 4/275 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD +KG+PIRIMWSQRDPSLRKSGVGNVFIKNLDKSI
Sbjct: 53 GYAYVNFQQP--ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFSAFG+ILSCKV DE G SKGY FVHFET+EAA+K+IEK+NGMLLN + VF
Sbjct: 111 DNKALYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVF 169
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGK 241
VG+F RKERE ELG KAK FTNVYIKNFGE+ +DE LKE+F +G S +VM + +GK
Sbjct: 170 VGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGK 229
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
S+GFGFV+YE E A KAV+ NGKE+ GKI++VGRAQKK ER ELKR+FE LK ER++
Sbjct: 230 SKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERIS 289
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLY+KNLDD+IDDE+LRKEF+PFG+ITSAK
Sbjct: 290 RYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAK 324
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 85/191 (44%), Positives = 122/191 (63%), Gaps = 10/191 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV+IKN + +D++++ + FS FG LS KV +D G SKG+GFV +E E ANK++E++
Sbjct: 192 NVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEM 251
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKLK 221
NG ++ KI+FVG+ + ER+ EL K + N+YIKN + +DEKL+
Sbjct: 252 NGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLR 311
Query: 222 EMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKK 281
+ F P+G+ITS +VM DG+S+GFGFV + SPE A KAV NG+ V K LYV AQ+K
Sbjct: 312 KEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRK 371
Query: 282 AERTQELKRRF 292
ER L ++
Sbjct: 372 EERKAHLTNQY 382
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 122/228 (53%), Gaps = 17/228 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + +Y+ FS G +LS +V +D S GY +V+F+ A +++
Sbjct: 10 MASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERAL 69
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N ++ K + I +R+ L + NV+IKN + +++ L + F +G
Sbjct: 70 DTMNFDVIKGKPI----RIMWSQRDPSLRKSG--VGNVFIKNLDKSIDNKALYDTFSAFG 123
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S +V+ ++ S+G+ FV +E+ E A+KA++ NG ++ + ++VGR + + ER EL
Sbjct: 124 NILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAEL 183
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ + N+Y+KN + +DDE L++ F+ FG S K
Sbjct: 184 GAKAKEF----------TNVYIKNFGEEVDDESLKELFSQFGKTLSVK 221
>gi|410263250|gb|JAA19591.1| poly(A) binding protein, cytoplasmic 4 (inducible form) [Pan
troglodytes]
Length = 644
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 199/275 (72%), Positives = 230/275 (83%), Gaps = 4/275 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD +KG+PIRIMWSQRDPSLRKSGVGNVFIKNLDKSI
Sbjct: 53 GYAYVNFQQP--ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFSAFG+ILSCKV DE G SKGY FVHFET+EAA+K+IEK+NGMLLN + VF
Sbjct: 111 DNKALYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVF 169
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGK 241
VG+F RKERE ELG KAK FTNVYIKNFGE+ +DE LKE+F +G S +VM + +GK
Sbjct: 170 VGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGK 229
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
S+GFGFV+YE E A KAV+ NGKE+ GKI++VGRAQKK ER ELKR+FE LK ER++
Sbjct: 230 SKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERIS 289
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLY+KNLDD+IDDE+LRKEF+PFG+ITSAK
Sbjct: 290 RYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAK 324
Score = 165 bits (417), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 85/191 (44%), Positives = 122/191 (63%), Gaps = 10/191 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV+IKN + +D++++ + FS FG LS KV +D G SKG+GFV +E E ANK++E++
Sbjct: 192 NVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEM 251
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKLK 221
NG ++ KI+FVG+ + ER+ EL K + N+YIKN + +DEKL+
Sbjct: 252 NGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLR 311
Query: 222 EMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKK 281
+ F P+G+ITS +VM DG+S+GFGFV + SPE A KAV NG+ V K LYV AQ+K
Sbjct: 312 KEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRK 371
Query: 282 AERTQELKRRF 292
ER L ++
Sbjct: 372 EERKAHLTNQY 382
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 122/228 (53%), Gaps = 17/228 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + +Y+ FS G +LS +V +D S GY +V+F+ A +++
Sbjct: 10 MASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERAL 69
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N ++ K + I +R+ L + NV+IKN + +++ L + F +G
Sbjct: 70 DTMNFDVIKGKPI----RIMWSQRDPSLRKSG--VGNVFIKNLDKSIDNKALYDTFSAFG 123
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S +V+ ++ S+G+ FV +E+ E A+KA++ NG ++ + ++VGR + + ER EL
Sbjct: 124 NILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAEL 183
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ + N+Y+KN + +DDE L++ F+ FG S K
Sbjct: 184 GAKAKEF----------TNVYIKNFGEEVDDESLKELFSQFGKTLSVK 221
>gi|348553000|ref|XP_003462315.1| PREDICTED: polyadenylate-binding protein 4-like isoform 4 [Cavia
porcellus]
Length = 631
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 199/275 (72%), Positives = 230/275 (83%), Gaps = 4/275 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD +KG+PIRIMWSQRDPSLRKSGVGNVFIKNLDKSI
Sbjct: 53 GYAYVNFQQP--ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFSAFG+ILSCKV DE G SKGY FVHFET+EAA+K+IEK+NGMLLN + VF
Sbjct: 111 DNKALYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVF 169
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGK 241
VG+F RKERE ELG KAK FTNVYIKNFGE+ +DE LKE+F +G S +VM + GK
Sbjct: 170 VGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDENLKELFSQFGKTLSVKVMRDPSGK 229
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
S+GFGFV+YE E A KAV+ NGKE++GKI++VGRAQKK ER ELKR+FE LK ER++
Sbjct: 230 SKGFGFVSYEKHEDANKAVEEMNGKEINGKIIFVGRAQKKVERQAELKRKFEQLKQERIS 289
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLY+KNLDD+IDDE+LRKEF+PFG+ITSAK
Sbjct: 290 RYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAK 324
Score = 166 bits (420), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 86/191 (45%), Positives = 121/191 (63%), Gaps = 10/191 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV+IKN + +D++ + + FS FG LS KV +D G SKG+GFV +E E ANK++E++
Sbjct: 192 NVYIKNFGEEVDDENLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEM 251
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKLK 221
NG +N KI+FVG+ + ER+ EL K + N+YIKN + +DEKL+
Sbjct: 252 NGKEINGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLR 311
Query: 222 EMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKK 281
+ F P+G+ITS +VM DG+S+GFGFV + SPE A KAV NG+ V K LYV AQ+K
Sbjct: 312 KEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRK 371
Query: 282 AERTQELKRRF 292
ER L ++
Sbjct: 372 EERKAHLTNQY 382
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 122/228 (53%), Gaps = 17/228 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + +Y+ FS G +LS +V +D S GY +V+F+ A +++
Sbjct: 10 MASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERAL 69
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N ++ K + I +R+ L + NV+IKN + +++ L + F +G
Sbjct: 70 DTMNFDVIKGKPI----RIMWSQRDPSLRKSG--VGNVFIKNLDKSIDNKALYDTFSAFG 123
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S +V+ ++ S+G+ FV +E+ E A+KA++ NG ++ + ++VGR + + ER EL
Sbjct: 124 NILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAEL 183
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ + N+Y+KN + +DDE L++ F+ FG S K
Sbjct: 184 GAKAKEF----------TNVYIKNFGEEVDDENLKELFSQFGKTLSVK 221
>gi|208431836|ref|NP_001129126.1| polyadenylate-binding protein 4 isoform 3 [Homo sapiens]
gi|332808512|ref|XP_003308043.1| PREDICTED: polyadenylate-binding protein 4 [Pan troglodytes]
gi|395730718|ref|XP_003775778.1| PREDICTED: polyadenylate-binding protein 4 isoform 3 [Pongo abelii]
gi|426329064|ref|XP_004025564.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Gorilla
gorilla gorilla]
gi|119627671|gb|EAX07266.1| poly(A) binding protein, cytoplasmic 4 (inducible form), isoform
CRA_f [Homo sapiens]
gi|410227602|gb|JAA11020.1| poly(A) binding protein, cytoplasmic 4 (inducible form) [Pan
troglodytes]
Length = 631
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 199/275 (72%), Positives = 230/275 (83%), Gaps = 4/275 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD +KG+PIRIMWSQRDPSLRKSGVGNVFIKNLDKSI
Sbjct: 53 GYAYVNFQQP--ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFSAFG+ILSCKV DE G SKGY FVHFET+EAA+K+IEK+NGMLLN + VF
Sbjct: 111 DNKALYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVF 169
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGK 241
VG+F RKERE ELG KAK FTNVYIKNFGE+ +DE LKE+F +G S +VM + +GK
Sbjct: 170 VGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGK 229
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
S+GFGFV+YE E A KAV+ NGKE+ GKI++VGRAQKK ER ELKR+FE LK ER++
Sbjct: 230 SKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERIS 289
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLY+KNLDD+IDDE+LRKEF+PFG+ITSAK
Sbjct: 290 RYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAK 324
Score = 165 bits (418), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 85/191 (44%), Positives = 122/191 (63%), Gaps = 10/191 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV+IKN + +D++++ + FS FG LS KV +D G SKG+GFV +E E ANK++E++
Sbjct: 192 NVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEM 251
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKLK 221
NG ++ KI+FVG+ + ER+ EL K + N+YIKN + +DEKL+
Sbjct: 252 NGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLR 311
Query: 222 EMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKK 281
+ F P+G+ITS +VM DG+S+GFGFV + SPE A KAV NG+ V K LYV AQ+K
Sbjct: 312 KEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRK 371
Query: 282 AERTQELKRRF 292
ER L ++
Sbjct: 372 EERKAHLTNQY 382
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 122/228 (53%), Gaps = 17/228 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + +Y+ FS G +LS +V +D S GY +V+F+ A +++
Sbjct: 10 MASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERAL 69
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N ++ K + I +R+ L + NV+IKN + +++ L + F +G
Sbjct: 70 DTMNFDVIKGKPI----RIMWSQRDPSLRKSG--VGNVFIKNLDKSIDNKALYDTFSAFG 123
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S +V+ ++ S+G+ FV +E+ E A+KA++ NG ++ + ++VGR + + ER EL
Sbjct: 124 NILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAEL 183
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ + N+Y+KN + +DDE L++ F+ FG S K
Sbjct: 184 GAKAKEF----------TNVYIKNFGEEVDDESLKELFSQFGKTLSVK 221
>gi|119627667|gb|EAX07262.1| poly(A) binding protein, cytoplasmic 4 (inducible form), isoform
CRA_b [Homo sapiens]
Length = 645
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 199/275 (72%), Positives = 230/275 (83%), Gaps = 4/275 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD +KG+PIRIMWSQRDPSLRKSGVGNVFIKNLDKSI
Sbjct: 53 GYAYVNFQQP--ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFSAFG+ILSCKV DE G SKGY FVHFET+EAA+K+IEK+NGMLLN + VF
Sbjct: 111 DNKALYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVF 169
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGK 241
VG+F RKERE ELG KAK FTNVYIKNFGE+ +DE LKE+F +G S +VM + +GK
Sbjct: 170 VGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGK 229
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
S+GFGFV+YE E A KAV+ NGKE+ GKI++VGRAQKK ER ELKR+FE LK ER++
Sbjct: 230 SKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERIS 289
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLY+KNLDD+IDDE+LRKEF+PFG+ITSAK
Sbjct: 290 RYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAK 324
Score = 165 bits (418), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 85/191 (44%), Positives = 122/191 (63%), Gaps = 10/191 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV+IKN + +D++++ + FS FG LS KV +D G SKG+GFV +E E ANK++E++
Sbjct: 192 NVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEM 251
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKLK 221
NG ++ KI+FVG+ + ER+ EL K + N+YIKN + +DEKL+
Sbjct: 252 NGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLR 311
Query: 222 EMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKK 281
+ F P+G+ITS +VM DG+S+GFGFV + SPE A KAV NG+ V K LYV AQ+K
Sbjct: 312 KEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRK 371
Query: 282 AERTQELKRRF 292
ER L ++
Sbjct: 372 EERKAHLTNQY 382
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 122/228 (53%), Gaps = 17/228 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + +Y+ FS G +LS +V +D S GY +V+F+ A +++
Sbjct: 10 MASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERAL 69
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N ++ K + I +R+ L + NV+IKN + +++ L + F +G
Sbjct: 70 DTMNFDVIKGKPI----RIMWSQRDPSLRKSG--VGNVFIKNLDKSIDNKALYDTFSAFG 123
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S +V+ ++ S+G+ FV +E+ E A+KA++ NG ++ + ++VGR + + ER EL
Sbjct: 124 NILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAEL 183
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ + N+Y+KN + +DDE L++ F+ FG S K
Sbjct: 184 GAKAKEF----------TNVYIKNFGEEVDDESLKELFSQFGKTLSVK 221
>gi|410263248|gb|JAA19590.1| poly(A) binding protein, cytoplasmic 4 (inducible form) [Pan
troglodytes]
gi|410263254|gb|JAA19593.1| poly(A) binding protein, cytoplasmic 4 (inducible form) [Pan
troglodytes]
Length = 660
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 199/275 (72%), Positives = 230/275 (83%), Gaps = 4/275 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD +KG+PIRIMWSQRDPSLRKSGVGNVFIKNLDKSI
Sbjct: 53 GYAYVNFQQP--ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFSAFG+ILSCKV DE G SKGY FVHFET+EAA+K+IEK+NGMLLN + VF
Sbjct: 111 DNKALYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVF 169
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGK 241
VG+F RKERE ELG KAK FTNVYIKNFGE+ +DE LKE+F +G S +VM + +GK
Sbjct: 170 VGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGK 229
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
S+GFGFV+YE E A KAV+ NGKE+ GKI++VGRAQKK ER ELKR+FE LK ER++
Sbjct: 230 SKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERIS 289
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLY+KNLDD+IDDE+LRKEF+PFG+ITSAK
Sbjct: 290 RYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAK 324
Score = 165 bits (418), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 85/191 (44%), Positives = 122/191 (63%), Gaps = 10/191 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV+IKN + +D++++ + FS FG LS KV +D G SKG+GFV +E E ANK++E++
Sbjct: 192 NVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEM 251
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKLK 221
NG ++ KI+FVG+ + ER+ EL K + N+YIKN + +DEKL+
Sbjct: 252 NGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLR 311
Query: 222 EMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKK 281
+ F P+G+ITS +VM DG+S+GFGFV + SPE A KAV NG+ V K LYV AQ+K
Sbjct: 312 KEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRK 371
Query: 282 AERTQELKRRF 292
ER L ++
Sbjct: 372 EERKAHLTNQY 382
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 122/228 (53%), Gaps = 17/228 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + +Y+ FS G +LS +V +D S GY +V+F+ A +++
Sbjct: 10 MASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERAL 69
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N ++ K + I +R+ L + NV+IKN + +++ L + F +G
Sbjct: 70 DTMNFDVIKGKPI----RIMWSQRDPSLRKSG--VGNVFIKNLDKSIDNKALYDTFSAFG 123
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S +V+ ++ S+G+ FV +E+ E A+KA++ NG ++ + ++VGR + + ER EL
Sbjct: 124 NILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAEL 183
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ + N+Y+KN + +DDE L++ F+ FG S K
Sbjct: 184 GAKAKEF----------TNVYIKNFGEEVDDESLKELFSQFGKTLSVK 221
>gi|94730404|sp|P20965.3|PABPA_XENLA RecName: Full=Polyadenylate-binding protein 1-A; Short=PABP-1-A;
Short=Poly(A)-binding protein 1-A; Short=xPABP1-A;
AltName: Full=Cytoplasmic poly(A)-binding protein 1-A
gi|30353795|gb|AAH52100.1| Pabpc1 protein [Xenopus laevis]
Length = 633
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 198/275 (72%), Positives = 228/275 (82%), Gaps = 4/275 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD +KGRP+RIMWSQRDPSLRKSGVGN+FIKNLDKSI
Sbjct: 53 GYAYVNFQQP--ADAERALDTMNFDVIKGRPVRIMWSQRDPSLRKSGVGNIFIKNLDKSI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFSAFG+ILSCKV DE G SKGYGFVHFET+EAA ++I+K+NGMLLN + VF
Sbjct: 111 DNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIDKMNGMLLNDRKVF 169
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GK 241
VG+F RKERE ELG +AK FTNVYIKNFG+D NDE+LKEMF YG S +VM +D GK
Sbjct: 170 VGRFKSRKEREAELGARAKEFTNVYIKNFGDDMNDERLKEMFGKYGPALSVKVMTDDNGK 229
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
S+GFGFV++E E A+KAV NGK+++GK ++VGRAQKK ER ELKR+FE +K +R+
Sbjct: 230 SKGFGFVSFERHEDAQKAVDEMNGKDMNGKSMFVGRAQKKVERQTELKRKFEQMKQDRIT 289
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLYVKNLDD IDDERLRKEF PFGTITSAK
Sbjct: 290 RYQGVNLYVKNLDDGIDDERLRKEFLPFGTITSAK 324
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 90/232 (38%), Positives = 132/232 (56%), Gaps = 16/232 (6%)
Query: 77 TERALDTMNFDALKGRPIRI----MWSQRDPSL--RKSGVGNVFIKNLDKSIDNKAMYDT 130
ERA+D MN L R + + +R+ L R NV+IKN ++++ + +
Sbjct: 151 AERAIDKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGDDMNDERLKEM 210
Query: 131 FSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRK 190
F +G LS KV D+ G SKG+GFV FE E A K+++++NG +N K +FVG+ +
Sbjct: 211 FGKYGPALSVKVMTDDNGKSKGFGFVSFERHEDAQKAVDEMNGKDMNGKSMFVGRAQKKV 270
Query: 191 EREKELGEKAKLF----------TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDG 240
ER+ EL K + N+Y+KN + +DE+L++ F P+GTITS +VM G
Sbjct: 271 ERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFLPFGTITSAKVMMEGG 330
Query: 241 KSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRF 292
+S+GFGFV + SPE A KAV NG+ V K LYV AQ+K ER L ++
Sbjct: 331 RSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAHLTNQY 382
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 126/236 (53%), Gaps = 17/236 (7%)
Query: 102 DPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFET 160
+PS + ++++ +L + + +Y+ FS G ILS +V +D S GY +V+F+
Sbjct: 2 NPSAPSYPMASLYVGDLHQDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 161 EEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKL 220
A ++++ +N ++ + V I +R+ L + N++IKN + +++ L
Sbjct: 62 PADAERALDTMNFDVIKGRPV----RIMWSQRDPSLRKSG--VGNIFIKNLDKSIDNKAL 115
Query: 221 KEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
+ F +G I S +V+ ++ S+G+GFV +E+ E AE+A+ NG ++ + ++VGR +
Sbjct: 116 YDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIDKMNGMLLNDRKVFVGRFKS 175
Query: 281 KAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ ER EL R + N+Y+KN D ++DERL++ F +G S K
Sbjct: 176 RKEREAELGARAKEF----------TNVYIKNFGDDMNDERLKEMFGKYGPALSVK 221
>gi|48734702|gb|AAH71591.1| PABPC4 protein [Homo sapiens]
Length = 660
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 199/275 (72%), Positives = 230/275 (83%), Gaps = 4/275 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD +KG+PIRIMWSQRDPSLRKSGVGNVFIKNLDKSI
Sbjct: 53 GYAYVNFQQP--ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFSAFG+ILSCKV DE G SKGY FVHFET+EAA+K+IEK+NGMLLN + VF
Sbjct: 111 DNKALYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVF 169
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGK 241
VG+F RKERE ELG KAK FTNVYIKNFGE+ +DE LKE+F +G S +VM + +GK
Sbjct: 170 VGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGK 229
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
S+GFGFV+YE E A KAV+ NGKE+ GKI++VGRAQKK ER ELKR+FE LK ER++
Sbjct: 230 SKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERIS 289
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLY+KNLDD+IDDE+LRKEF+PFG+ITSAK
Sbjct: 290 RYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAK 324
Score = 165 bits (418), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 85/191 (44%), Positives = 122/191 (63%), Gaps = 10/191 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV+IKN + +D++++ + FS FG LS KV +D G SKG+GFV +E E ANK++E++
Sbjct: 192 NVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEM 251
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKLK 221
NG ++ KI+FVG+ + ER+ EL K + N+YIKN + +DEKL+
Sbjct: 252 NGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLR 311
Query: 222 EMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKK 281
+ F P+G+ITS +VM DG+S+GFGFV + SPE A KAV NG+ V K LYV AQ+K
Sbjct: 312 KEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRK 371
Query: 282 AERTQELKRRF 292
ER L ++
Sbjct: 372 EERKAHLTNQY 382
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 122/228 (53%), Gaps = 17/228 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + +Y+ FS G +LS +V +D S GY +V+F+ A +++
Sbjct: 10 MASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERAL 69
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N ++ K + I +R+ L + NV+IKN + +++ L + F +G
Sbjct: 70 DTMNFDVIKGKPI----RIMWSQRDPSLRKSG--VGNVFIKNLDKSIDNKALYDTFSAFG 123
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S +V+ ++ S+G+ FV +E+ E A+KA++ NG ++ + ++VGR + + ER EL
Sbjct: 124 NILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAEL 183
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ + N+Y+KN + +DDE L++ F+ FG S K
Sbjct: 184 GAKAKEF----------TNVYIKNFGEEVDDESLKELFSQFGKTLSVK 221
>gi|402854031|ref|XP_003891684.1| PREDICTED: polyadenylate-binding protein 4 isoform 3 [Papio anubis]
Length = 631
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 199/275 (72%), Positives = 229/275 (83%), Gaps = 4/275 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD +KG+PIRIMWSQRDPSLRKSGVGNVFIKNLDKSI
Sbjct: 53 GYAYVNFQQP--ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFSAFG+ILSCKV DE G SKGY FVHFET+EAA+K+IEK+NGMLLN + VF
Sbjct: 111 DNKALYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVF 169
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGK 241
VG+F RKERE ELG KAK FTNVYIKNFGE+ +DE LKE+F +G S +VM + GK
Sbjct: 170 VGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGK 229
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
S+GFGFV+YE E A KAV+ NGKE+ GKI++VGRAQKK ER ELKR+FE LK ER++
Sbjct: 230 SKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERIS 289
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLY+KNLDD+IDDE+LRKEF+PFG+ITSAK
Sbjct: 290 RYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAK 324
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 85/191 (44%), Positives = 122/191 (63%), Gaps = 10/191 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV+IKN + +D++++ + FS FG LS KV +D G SKG+GFV +E E ANK++E++
Sbjct: 192 NVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEM 251
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKLK 221
NG ++ KI+FVG+ + ER+ EL K + N+YIKN + +DEKL+
Sbjct: 252 NGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLR 311
Query: 222 EMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKK 281
+ F P+G+ITS +VM DG+S+GFGFV + SPE A KAV NG+ V K LYV AQ+K
Sbjct: 312 KEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRK 371
Query: 282 AERTQELKRRF 292
ER L ++
Sbjct: 372 EERKAHLTNQY 382
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 122/228 (53%), Gaps = 17/228 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + +Y+ FS G +LS +V +D S GY +V+F+ A +++
Sbjct: 10 MASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERAL 69
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N ++ K + I +R+ L + NV+IKN + +++ L + F +G
Sbjct: 70 DTMNFDVIKGKPI----RIMWSQRDPSLRKSG--VGNVFIKNLDKSIDNKALYDTFSAFG 123
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S +V+ ++ S+G+ FV +E+ E A+KA++ NG ++ + ++VGR + + ER EL
Sbjct: 124 NILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAEL 183
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ + N+Y+KN + +DDE L++ F+ FG S K
Sbjct: 184 GAKAKEF----------TNVYIKNFGEEVDDESLKELFSQFGKTLSVK 221
>gi|119627670|gb|EAX07265.1| poly(A) binding protein, cytoplasmic 4 (inducible form), isoform
CRA_e [Homo sapiens]
Length = 615
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 199/275 (72%), Positives = 230/275 (83%), Gaps = 4/275 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD +KG+PIRIMWSQRDPSLRKSGVGNVFIKNLDKSI
Sbjct: 53 GYAYVNFQQP--ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFSAFG+ILSCKV DE G SKGY FVHFET+EAA+K+IEK+NGMLLN + VF
Sbjct: 111 DNKALYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVF 169
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGK 241
VG+F RKERE ELG KAK FTNVYIKNFGE+ +DE LKE+F +G S +VM + +GK
Sbjct: 170 VGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGK 229
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
S+GFGFV+YE E A KAV+ NGKE+ GKI++VGRAQKK ER ELKR+FE LK ER++
Sbjct: 230 SKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERIS 289
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLY+KNLDD+IDDE+LRKEF+PFG+ITSAK
Sbjct: 290 RYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAK 324
Score = 165 bits (417), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 85/191 (44%), Positives = 122/191 (63%), Gaps = 10/191 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV+IKN + +D++++ + FS FG LS KV +D G SKG+GFV +E E ANK++E++
Sbjct: 192 NVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEM 251
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKLK 221
NG ++ KI+FVG+ + ER+ EL K + N+YIKN + +DEKL+
Sbjct: 252 NGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLR 311
Query: 222 EMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKK 281
+ F P+G+ITS +VM DG+S+GFGFV + SPE A KAV NG+ V K LYV AQ+K
Sbjct: 312 KEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRK 371
Query: 282 AERTQELKRRF 292
ER L ++
Sbjct: 372 EERKAHLTNQY 382
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 122/228 (53%), Gaps = 17/228 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + +Y+ FS G +LS +V +D S GY +V+F+ A +++
Sbjct: 10 MASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERAL 69
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N ++ K + I +R+ L + NV+IKN + +++ L + F +G
Sbjct: 70 DTMNFDVIKGKPI----RIMWSQRDPSLRKSG--VGNVFIKNLDKSIDNKALYDTFSAFG 123
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S +V+ ++ S+G+ FV +E+ E A+KA++ NG ++ + ++VGR + + ER EL
Sbjct: 124 NILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAEL 183
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ + N+Y+KN + +DDE L++ F+ FG S K
Sbjct: 184 GAKAKEF----------TNVYIKNFGEEVDDESLKELFSQFGKTLSVK 221
>gi|348552996|ref|XP_003462313.1| PREDICTED: polyadenylate-binding protein 4-like isoform 2 [Cavia
porcellus]
Length = 644
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 199/275 (72%), Positives = 230/275 (83%), Gaps = 4/275 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD +KG+PIRIMWSQRDPSLRKSGVGNVFIKNLDKSI
Sbjct: 53 GYAYVNFQQP--ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFSAFG+ILSCKV DE G SKGY FVHFET+EAA+K+IEK+NGMLLN + VF
Sbjct: 111 DNKALYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVF 169
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGK 241
VG+F RKERE ELG KAK FTNVYIKNFGE+ +DE LKE+F +G S +VM + GK
Sbjct: 170 VGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDENLKELFSQFGKTLSVKVMRDPSGK 229
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
S+GFGFV+YE E A KAV+ NGKE++GKI++VGRAQKK ER ELKR+FE LK ER++
Sbjct: 230 SKGFGFVSYEKHEDANKAVEEMNGKEINGKIIFVGRAQKKVERQAELKRKFEQLKQERIS 289
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLY+KNLDD+IDDE+LRKEF+PFG+ITSAK
Sbjct: 290 RYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAK 324
Score = 166 bits (420), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 86/191 (45%), Positives = 121/191 (63%), Gaps = 10/191 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV+IKN + +D++ + + FS FG LS KV +D G SKG+GFV +E E ANK++E++
Sbjct: 192 NVYIKNFGEEVDDENLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEM 251
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKLK 221
NG +N KI+FVG+ + ER+ EL K + N+YIKN + +DEKL+
Sbjct: 252 NGKEINGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLR 311
Query: 222 EMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKK 281
+ F P+G+ITS +VM DG+S+GFGFV + SPE A KAV NG+ V K LYV AQ+K
Sbjct: 312 KEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRK 371
Query: 282 AERTQELKRRF 292
ER L ++
Sbjct: 372 EERKAHLTNQY 382
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 122/228 (53%), Gaps = 17/228 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + +Y+ FS G +LS +V +D S GY +V+F+ A +++
Sbjct: 10 MASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERAL 69
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N ++ K + I +R+ L + NV+IKN + +++ L + F +G
Sbjct: 70 DTMNFDVIKGKPI----RIMWSQRDPSLRKSG--VGNVFIKNLDKSIDNKALYDTFSAFG 123
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S +V+ ++ S+G+ FV +E+ E A+KA++ NG ++ + ++VGR + + ER EL
Sbjct: 124 NILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAEL 183
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ + N+Y+KN + +DDE L++ F+ FG S K
Sbjct: 184 GAKAKEF----------TNVYIKNFGEEVDDENLKELFSQFGKTLSVK 221
>gi|332248417|ref|XP_003273360.1| PREDICTED: polyadenylate-binding protein 4 isoform 3 [Nomascus
leucogenys]
gi|383411099|gb|AFH28763.1| polyadenylate-binding protein 4 isoform 3 [Macaca mulatta]
gi|384941234|gb|AFI34222.1| polyadenylate-binding protein 4 isoform 3 [Macaca mulatta]
Length = 631
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 199/275 (72%), Positives = 229/275 (83%), Gaps = 4/275 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD +KG+PIRIMWSQRDPSLRKSGVGNVFIKNLDKSI
Sbjct: 53 GYAYVNFQQP--ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFSAFG+ILSCKV DE G SKGY FVHFET+EAA+K+IEK+NGMLLN + VF
Sbjct: 111 DNKALYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVF 169
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGK 241
VG+F RKERE ELG KAK FTNVYIKNFGE+ +DE LKE+F +G S +VM + GK
Sbjct: 170 VGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGK 229
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
S+GFGFV+YE E A KAV+ NGKE+ GKI++VGRAQKK ER ELKR+FE LK ER++
Sbjct: 230 SKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERIS 289
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLY+KNLDD+IDDE+LRKEF+PFG+ITSAK
Sbjct: 290 RYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAK 324
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 85/191 (44%), Positives = 122/191 (63%), Gaps = 10/191 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV+IKN + +D++++ + FS FG LS KV +D G SKG+GFV +E E ANK++E++
Sbjct: 192 NVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEM 251
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKLK 221
NG ++ KI+FVG+ + ER+ EL K + N+YIKN + +DEKL+
Sbjct: 252 NGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLR 311
Query: 222 EMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKK 281
+ F P+G+ITS +VM DG+S+GFGFV + SPE A KAV NG+ V K LYV AQ+K
Sbjct: 312 KEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRK 371
Query: 282 AERTQELKRRF 292
ER L ++
Sbjct: 372 EERKAHLTNQY 382
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 122/228 (53%), Gaps = 17/228 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + +Y+ FS G +LS +V +D S GY +V+F+ A +++
Sbjct: 10 MASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERAL 69
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N ++ K + I +R+ L + NV+IKN + +++ L + F +G
Sbjct: 70 DTMNFDVIKGKPI----RIMWSQRDPSLRKSG--VGNVFIKNLDKSIDNKALYDTFSAFG 123
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S +V+ ++ S+G+ FV +E+ E A+KA++ NG ++ + ++VGR + + ER EL
Sbjct: 124 NILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAEL 183
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ + N+Y+KN + +DDE L++ F+ FG S K
Sbjct: 184 GAKAKEF----------TNVYIKNFGEEVDDESLKELFSQFGKTLSVK 221
>gi|417403696|gb|JAA48646.1| Putative polyadenylate-binding protein rrm superfamily [Desmodus
rotundus]
Length = 660
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 198/275 (72%), Positives = 230/275 (83%), Gaps = 4/275 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD +KG+PIRIMWSQRDPSLRKSGVGNVFIKNLDKSI
Sbjct: 53 GYAYVNFQQP--ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFSAFG+ILSCKV DE G SKGY FVHFET+EAA+K+IEK+NGMLLN + VF
Sbjct: 111 DNKALYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVF 169
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGK 241
VG+F RKERE ELG KAK FTNVYIKNFGE+ +DE LKE+F +G S +VM + +GK
Sbjct: 170 VGRFKSRKEREAELGAKAKEFTNVYIKNFGEEMDDESLKELFSQFGKTLSVKVMRDPNGK 229
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
S+GFGFV+YE E A KAV+ NGKE+ GK+++VGRAQKK ER ELKR+FE LK ER++
Sbjct: 230 SKGFGFVSYEKHEDANKAVEEMNGKEISGKVIFVGRAQKKVERQAELKRKFEQLKQERIS 289
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLY+KNLDD+IDDE+LRKEF+PFG+ITSAK
Sbjct: 290 RYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAK 324
Score = 164 bits (415), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 84/191 (43%), Positives = 122/191 (63%), Gaps = 10/191 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV+IKN + +D++++ + FS FG LS KV +D G SKG+GFV +E E ANK++E++
Sbjct: 192 NVYIKNFGEEMDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEM 251
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKLK 221
NG ++ K++FVG+ + ER+ EL K + N+YIKN + +DEKL+
Sbjct: 252 NGKEISGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLR 311
Query: 222 EMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKK 281
+ F P+G+ITS +VM DG+S+GFGFV + SPE A KAV NG+ V K LYV AQ+K
Sbjct: 312 KEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRK 371
Query: 282 AERTQELKRRF 292
ER L ++
Sbjct: 372 EERKAHLTNQY 382
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 122/228 (53%), Gaps = 17/228 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + +Y+ FS G +LS +V +D S GY +V+F+ A +++
Sbjct: 10 MASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERAL 69
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N ++ K + I +R+ L + NV+IKN + +++ L + F +G
Sbjct: 70 DTMNFDVIKGKPI----RIMWSQRDPSLRKSG--VGNVFIKNLDKSIDNKALYDTFSAFG 123
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S +V+ ++ S+G+ FV +E+ E A+KA++ NG ++ + ++VGR + + ER EL
Sbjct: 124 NILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAEL 183
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ + N+Y+KN + +DDE L++ F+ FG S K
Sbjct: 184 GAKAKEF----------TNVYIKNFGEEMDDESLKELFSQFGKTLSVK 221
>gi|417403591|gb|JAA48595.1| Putative polyadenylate-binding protein rrm superfamily [Desmodus
rotundus]
Length = 644
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 198/275 (72%), Positives = 230/275 (83%), Gaps = 4/275 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD +KG+PIRIMWSQRDPSLRKSGVGNVFIKNLDKSI
Sbjct: 53 GYAYVNFQQP--ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFSAFG+ILSCKV DE G SKGY FVHFET+EAA+K+IEK+NGMLLN + VF
Sbjct: 111 DNKALYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVF 169
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGK 241
VG+F RKERE ELG KAK FTNVYIKNFGE+ +DE LKE+F +G S +VM + +GK
Sbjct: 170 VGRFKSRKEREAELGAKAKEFTNVYIKNFGEEMDDESLKELFSQFGKTLSVKVMRDPNGK 229
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
S+GFGFV+YE E A KAV+ NGKE+ GK+++VGRAQKK ER ELKR+FE LK ER++
Sbjct: 230 SKGFGFVSYEKHEDANKAVEEMNGKEISGKVIFVGRAQKKVERQAELKRKFEQLKQERIS 289
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLY+KNLDD+IDDE+LRKEF+PFG+ITSAK
Sbjct: 290 RYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAK 324
Score = 164 bits (415), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 84/191 (43%), Positives = 122/191 (63%), Gaps = 10/191 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV+IKN + +D++++ + FS FG LS KV +D G SKG+GFV +E E ANK++E++
Sbjct: 192 NVYIKNFGEEMDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEM 251
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKLK 221
NG ++ K++FVG+ + ER+ EL K + N+YIKN + +DEKL+
Sbjct: 252 NGKEISGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLR 311
Query: 222 EMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKK 281
+ F P+G+ITS +VM DG+S+GFGFV + SPE A KAV NG+ V K LYV AQ+K
Sbjct: 312 KEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRK 371
Query: 282 AERTQELKRRF 292
ER L ++
Sbjct: 372 EERKAHLTNQY 382
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 122/228 (53%), Gaps = 17/228 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + +Y+ FS G +LS +V +D S GY +V+F+ A +++
Sbjct: 10 MASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERAL 69
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N ++ K + I +R+ L + NV+IKN + +++ L + F +G
Sbjct: 70 DTMNFDVIKGKPI----RIMWSQRDPSLRKSG--VGNVFIKNLDKSIDNKALYDTFSAFG 123
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S +V+ ++ S+G+ FV +E+ E A+KA++ NG ++ + ++VGR + + ER EL
Sbjct: 124 NILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAEL 183
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ + N+Y+KN + +DDE L++ F+ FG S K
Sbjct: 184 GAKAKEF----------TNVYIKNFGEEMDDESLKELFSQFGKTLSVK 221
>gi|332248413|ref|XP_003273358.1| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Nomascus
leucogenys]
gi|355557859|gb|EHH14639.1| hypothetical protein EGK_00600 [Macaca mulatta]
gi|383411103|gb|AFH28765.1| polyadenylate-binding protein 4 isoform 1 [Macaca mulatta]
gi|384941238|gb|AFI34224.1| polyadenylate-binding protein 4 isoform 1 [Macaca mulatta]
Length = 660
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 199/275 (72%), Positives = 229/275 (83%), Gaps = 4/275 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD +KG+PIRIMWSQRDPSLRKSGVGNVFIKNLDKSI
Sbjct: 53 GYAYVNFQQP--ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFSAFG+ILSCKV DE G SKGY FVHFET+EAA+K+IEK+NGMLLN + VF
Sbjct: 111 DNKALYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVF 169
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGK 241
VG+F RKERE ELG KAK FTNVYIKNFGE+ +DE LKE+F +G S +VM + GK
Sbjct: 170 VGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGK 229
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
S+GFGFV+YE E A KAV+ NGKE+ GKI++VGRAQKK ER ELKR+FE LK ER++
Sbjct: 230 SKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERIS 289
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLY+KNLDD+IDDE+LRKEF+PFG+ITSAK
Sbjct: 290 RYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAK 324
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 85/191 (44%), Positives = 122/191 (63%), Gaps = 10/191 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV+IKN + +D++++ + FS FG LS KV +D G SKG+GFV +E E ANK++E++
Sbjct: 192 NVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEM 251
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKLK 221
NG ++ KI+FVG+ + ER+ EL K + N+YIKN + +DEKL+
Sbjct: 252 NGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLR 311
Query: 222 EMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKK 281
+ F P+G+ITS +VM DG+S+GFGFV + SPE A KAV NG+ V K LYV AQ+K
Sbjct: 312 KEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRK 371
Query: 282 AERTQELKRRF 292
ER L ++
Sbjct: 372 EERKAHLTNQY 382
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 122/228 (53%), Gaps = 17/228 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + +Y+ FS G +LS +V +D S GY +V+F+ A +++
Sbjct: 10 MASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERAL 69
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N ++ K + I +R+ L + NV+IKN + +++ L + F +G
Sbjct: 70 DTMNFDVIKGKPI----RIMWSQRDPSLRKSG--VGNVFIKNLDKSIDNKALYDTFSAFG 123
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S +V+ ++ S+G+ FV +E+ E A+KA++ NG ++ + ++VGR + + ER EL
Sbjct: 124 NILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAEL 183
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ + N+Y+KN + +DDE L++ F+ FG S K
Sbjct: 184 GAKAKEF----------TNVYIKNFGEEVDDESLKELFSQFGKTLSVK 221
>gi|402854027|ref|XP_003891682.1| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Papio anubis]
Length = 660
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 199/275 (72%), Positives = 229/275 (83%), Gaps = 4/275 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD +KG+PIRIMWSQRDPSLRKSGVGNVFIKNLDKSI
Sbjct: 53 GYAYVNFQQP--ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFSAFG+ILSCKV DE G SKGY FVHFET+EAA+K+IEK+NGMLLN + VF
Sbjct: 111 DNKALYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVF 169
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGK 241
VG+F RKERE ELG KAK FTNVYIKNFGE+ +DE LKE+F +G S +VM + GK
Sbjct: 170 VGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGK 229
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
S+GFGFV+YE E A KAV+ NGKE+ GKI++VGRAQKK ER ELKR+FE LK ER++
Sbjct: 230 SKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERIS 289
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLY+KNLDD+IDDE+LRKEF+PFG+ITSAK
Sbjct: 290 RYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAK 324
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 85/191 (44%), Positives = 122/191 (63%), Gaps = 10/191 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV+IKN + +D++++ + FS FG LS KV +D G SKG+GFV +E E ANK++E++
Sbjct: 192 NVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEM 251
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKLK 221
NG ++ KI+FVG+ + ER+ EL K + N+YIKN + +DEKL+
Sbjct: 252 NGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLR 311
Query: 222 EMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKK 281
+ F P+G+ITS +VM DG+S+GFGFV + SPE A KAV NG+ V K LYV AQ+K
Sbjct: 312 KEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRK 371
Query: 282 AERTQELKRRF 292
ER L ++
Sbjct: 372 EERKAHLTNQY 382
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 122/228 (53%), Gaps = 17/228 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + +Y+ FS G +LS +V +D S GY +V+F+ A +++
Sbjct: 10 MASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERAL 69
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N ++ K + I +R+ L + NV+IKN + +++ L + F +G
Sbjct: 70 DTMNFDVIKGKPI----RIMWSQRDPSLRKSG--VGNVFIKNLDKSIDNKALYDTFSAFG 123
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S +V+ ++ S+G+ FV +E+ E A+KA++ NG ++ + ++VGR + + ER EL
Sbjct: 124 NILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAEL 183
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ + N+Y+KN + +DDE L++ F+ FG S K
Sbjct: 184 GAKAKEF----------TNVYIKNFGEEVDDESLKELFSQFGKTLSVK 221
>gi|348552994|ref|XP_003462312.1| PREDICTED: polyadenylate-binding protein 4-like isoform 1 [Cavia
porcellus]
Length = 660
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 199/275 (72%), Positives = 230/275 (83%), Gaps = 4/275 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD +KG+PIRIMWSQRDPSLRKSGVGNVFIKNLDKSI
Sbjct: 53 GYAYVNFQQP--ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFSAFG+ILSCKV DE G SKGY FVHFET+EAA+K+IEK+NGMLLN + VF
Sbjct: 111 DNKALYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVF 169
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGK 241
VG+F RKERE ELG KAK FTNVYIKNFGE+ +DE LKE+F +G S +VM + GK
Sbjct: 170 VGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDENLKELFSQFGKTLSVKVMRDPSGK 229
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
S+GFGFV+YE E A KAV+ NGKE++GKI++VGRAQKK ER ELKR+FE LK ER++
Sbjct: 230 SKGFGFVSYEKHEDANKAVEEMNGKEINGKIIFVGRAQKKVERQAELKRKFEQLKQERIS 289
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLY+KNLDD+IDDE+LRKEF+PFG+ITSAK
Sbjct: 290 RYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAK 324
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 86/191 (45%), Positives = 121/191 (63%), Gaps = 10/191 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV+IKN + +D++ + + FS FG LS KV +D G SKG+GFV +E E ANK++E++
Sbjct: 192 NVYIKNFGEEVDDENLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEM 251
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKLK 221
NG +N KI+FVG+ + ER+ EL K + N+YIKN + +DEKL+
Sbjct: 252 NGKEINGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLR 311
Query: 222 EMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKK 281
+ F P+G+ITS +VM DG+S+GFGFV + SPE A KAV NG+ V K LYV AQ+K
Sbjct: 312 KEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRK 371
Query: 282 AERTQELKRRF 292
ER L ++
Sbjct: 372 EERKAHLTNQY 382
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 122/228 (53%), Gaps = 17/228 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + +Y+ FS G +LS +V +D S GY +V+F+ A +++
Sbjct: 10 MASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERAL 69
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N ++ K + I +R+ L + NV+IKN + +++ L + F +G
Sbjct: 70 DTMNFDVIKGKPI----RIMWSQRDPSLRKSG--VGNVFIKNLDKSIDNKALYDTFSAFG 123
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S +V+ ++ S+G+ FV +E+ E A+KA++ NG ++ + ++VGR + + ER EL
Sbjct: 124 NILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAEL 183
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ + N+Y+KN + +DDE L++ F+ FG S K
Sbjct: 184 GAKAKEF----------TNVYIKNFGEEVDDENLKELFSQFGKTLSVK 221
>gi|344287655|ref|XP_003415568.1| PREDICTED: polyadenylate-binding protein 4 isoform 3 [Loxodonta
africana]
Length = 631
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 198/275 (72%), Positives = 229/275 (83%), Gaps = 4/275 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD +KG+PIRIMWSQRDPSLRKSGVGNVFIKNLDKSI
Sbjct: 53 GYAYVNFQQP--ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFSAFG+ILSCKV DE G SKGY FVHFET+EAA+K+IEK+NGMLLN + VF
Sbjct: 111 DNKALYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVF 169
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGK 241
VG+F RKERE ELG KAK FTNVYIKNFGE+ +DE LKE+F +G S +VM + GK
Sbjct: 170 VGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGK 229
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
S+GFGFV+YE E A KAV+ NGKE+ GK+++VGRAQKK ER ELKR+FE LK ER++
Sbjct: 230 SKGFGFVSYEKHEDANKAVEEMNGKEISGKVIFVGRAQKKVERQAELKRKFEQLKQERIS 289
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLY+KNLDD+IDDE+LRKEF+PFG+ITSAK
Sbjct: 290 RYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAK 324
Score = 165 bits (417), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 84/191 (43%), Positives = 122/191 (63%), Gaps = 10/191 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV+IKN + +D++++ + FS FG LS KV +D G SKG+GFV +E E ANK++E++
Sbjct: 192 NVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEM 251
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKLK 221
NG ++ K++FVG+ + ER+ EL K + N+YIKN + +DEKL+
Sbjct: 252 NGKEISGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLR 311
Query: 222 EMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKK 281
+ F P+G+ITS +VM DG+S+GFGFV + SPE A KAV NG+ V K LYV AQ+K
Sbjct: 312 KEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRK 371
Query: 282 AERTQELKRRF 292
ER L ++
Sbjct: 372 EERKAHLTNQY 382
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 122/228 (53%), Gaps = 17/228 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + +Y+ FS G +LS +V +D S GY +V+F+ A +++
Sbjct: 10 MASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERAL 69
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N ++ K + I +R+ L + NV+IKN + +++ L + F +G
Sbjct: 70 DTMNFDVIKGKPI----RIMWSQRDPSLRKSG--VGNVFIKNLDKSIDNKALYDTFSAFG 123
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S +V+ ++ S+G+ FV +E+ E A+KA++ NG ++ + ++VGR + + ER EL
Sbjct: 124 NILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAEL 183
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ + N+Y+KN + +DDE L++ F+ FG S K
Sbjct: 184 GAKAKEF----------TNVYIKNFGEEVDDESLKELFSQFGKTLSVK 221
>gi|332248415|ref|XP_003273359.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Nomascus
leucogenys]
gi|383411101|gb|AFH28764.1| polyadenylate-binding protein 4 isoform 2 [Macaca mulatta]
gi|384941236|gb|AFI34223.1| polyadenylate-binding protein 4 isoform 2 [Macaca mulatta]
Length = 644
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 199/275 (72%), Positives = 229/275 (83%), Gaps = 4/275 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD +KG+PIRIMWSQRDPSLRKSGVGNVFIKNLDKSI
Sbjct: 53 GYAYVNFQQP--ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFSAFG+ILSCKV DE G SKGY FVHFET+EAA+K+IEK+NGMLLN + VF
Sbjct: 111 DNKALYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVF 169
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGK 241
VG+F RKERE ELG KAK FTNVYIKNFGE+ +DE LKE+F +G S +VM + GK
Sbjct: 170 VGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGK 229
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
S+GFGFV+YE E A KAV+ NGKE+ GKI++VGRAQKK ER ELKR+FE LK ER++
Sbjct: 230 SKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERIS 289
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLY+KNLDD+IDDE+LRKEF+PFG+ITSAK
Sbjct: 290 RYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAK 324
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 85/191 (44%), Positives = 122/191 (63%), Gaps = 10/191 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV+IKN + +D++++ + FS FG LS KV +D G SKG+GFV +E E ANK++E++
Sbjct: 192 NVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEM 251
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKLK 221
NG ++ KI+FVG+ + ER+ EL K + N+YIKN + +DEKL+
Sbjct: 252 NGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLR 311
Query: 222 EMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKK 281
+ F P+G+ITS +VM DG+S+GFGFV + SPE A KAV NG+ V K LYV AQ+K
Sbjct: 312 KEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRK 371
Query: 282 AERTQELKRRF 292
ER L ++
Sbjct: 372 EERKAHLTNQY 382
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 122/228 (53%), Gaps = 17/228 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + +Y+ FS G +LS +V +D S GY +V+F+ A +++
Sbjct: 10 MASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERAL 69
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N ++ K + I +R+ L + NV+IKN + +++ L + F +G
Sbjct: 70 DTMNFDVIKGKPI----RIMWSQRDPSLRKSG--VGNVFIKNLDKSIDNKALYDTFSAFG 123
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S +V+ ++ S+G+ FV +E+ E A+KA++ NG ++ + ++VGR + + ER EL
Sbjct: 124 NILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAEL 183
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ + N+Y+KN + +DDE L++ F+ FG S K
Sbjct: 184 GAKAKEF----------TNVYIKNFGEEVDDESLKELFSQFGKTLSVK 221
>gi|402854029|ref|XP_003891683.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Papio anubis]
Length = 644
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 199/275 (72%), Positives = 229/275 (83%), Gaps = 4/275 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD +KG+PIRIMWSQRDPSLRKSGVGNVFIKNLDKSI
Sbjct: 53 GYAYVNFQQP--ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFSAFG+ILSCKV DE G SKGY FVHFET+EAA+K+IEK+NGMLLN + VF
Sbjct: 111 DNKALYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVF 169
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGK 241
VG+F RKERE ELG KAK FTNVYIKNFGE+ +DE LKE+F +G S +VM + GK
Sbjct: 170 VGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGK 229
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
S+GFGFV+YE E A KAV+ NGKE+ GKI++VGRAQKK ER ELKR+FE LK ER++
Sbjct: 230 SKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERIS 289
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLY+KNLDD+IDDE+LRKEF+PFG+ITSAK
Sbjct: 290 RYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAK 324
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 85/191 (44%), Positives = 122/191 (63%), Gaps = 10/191 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV+IKN + +D++++ + FS FG LS KV +D G SKG+GFV +E E ANK++E++
Sbjct: 192 NVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEM 251
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKLK 221
NG ++ KI+FVG+ + ER+ EL K + N+YIKN + +DEKL+
Sbjct: 252 NGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLR 311
Query: 222 EMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKK 281
+ F P+G+ITS +VM DG+S+GFGFV + SPE A KAV NG+ V K LYV AQ+K
Sbjct: 312 KEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRK 371
Query: 282 AERTQELKRRF 292
ER L ++
Sbjct: 372 EERKAHLTNQY 382
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 122/228 (53%), Gaps = 17/228 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + +Y+ FS G +LS +V +D S GY +V+F+ A +++
Sbjct: 10 MASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERAL 69
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N ++ K + I +R+ L + NV+IKN + +++ L + F +G
Sbjct: 70 DTMNFDVIKGKPI----RIMWSQRDPSLRKSG--VGNVFIKNLDKSIDNKALYDTFSAFG 123
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S +V+ ++ S+G+ FV +E+ E A+KA++ NG ++ + ++VGR + + ER EL
Sbjct: 124 NILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAEL 183
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ + N+Y+KN + +DDE L++ F+ FG S K
Sbjct: 184 GAKAKEF----------TNVYIKNFGEEVDDESLKELFSQFGKTLSVK 221
>gi|348552998|ref|XP_003462314.1| PREDICTED: polyadenylate-binding protein 4-like isoform 3 [Cavia
porcellus]
Length = 615
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 199/275 (72%), Positives = 230/275 (83%), Gaps = 4/275 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD +KG+PIRIMWSQRDPSLRKSGVGNVFIKNLDKSI
Sbjct: 53 GYAYVNFQQP--ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFSAFG+ILSCKV DE G SKGY FVHFET+EAA+K+IEK+NGMLLN + VF
Sbjct: 111 DNKALYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVF 169
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGK 241
VG+F RKERE ELG KAK FTNVYIKNFGE+ +DE LKE+F +G S +VM + GK
Sbjct: 170 VGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDENLKELFSQFGKTLSVKVMRDPSGK 229
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
S+GFGFV+YE E A KAV+ NGKE++GKI++VGRAQKK ER ELKR+FE LK ER++
Sbjct: 230 SKGFGFVSYEKHEDANKAVEEMNGKEINGKIIFVGRAQKKVERQAELKRKFEQLKQERIS 289
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLY+KNLDD+IDDE+LRKEF+PFG+ITSAK
Sbjct: 290 RYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAK 324
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 86/191 (45%), Positives = 121/191 (63%), Gaps = 10/191 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV+IKN + +D++ + + FS FG LS KV +D G SKG+GFV +E E ANK++E++
Sbjct: 192 NVYIKNFGEEVDDENLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEM 251
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKLK 221
NG +N KI+FVG+ + ER+ EL K + N+YIKN + +DEKL+
Sbjct: 252 NGKEINGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLR 311
Query: 222 EMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKK 281
+ F P+G+ITS +VM DG+S+GFGFV + SPE A KAV NG+ V K LYV AQ+K
Sbjct: 312 KEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRK 371
Query: 282 AERTQELKRRF 292
ER L ++
Sbjct: 372 EERKAHLTNQY 382
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 122/228 (53%), Gaps = 17/228 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + +Y+ FS G +LS +V +D S GY +V+F+ A +++
Sbjct: 10 MASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERAL 69
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N ++ K + I +R+ L + NV+IKN + +++ L + F +G
Sbjct: 70 DTMNFDVIKGKPI----RIMWSQRDPSLRKSG--VGNVFIKNLDKSIDNKALYDTFSAFG 123
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S +V+ ++ S+G+ FV +E+ E A+KA++ NG ++ + ++VGR + + ER EL
Sbjct: 124 NILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAEL 183
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ + N+Y+KN + +DDE L++ F+ FG S K
Sbjct: 184 GAKAKEF----------TNVYIKNFGEEVDDENLKELFSQFGKTLSVK 221
>gi|149637721|ref|XP_001509272.1| PREDICTED: polyadenylate-binding protein 1-like [Ornithorhynchus
anatinus]
Length = 636
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 197/275 (71%), Positives = 229/275 (83%), Gaps = 4/275 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD +KG+P+RIMWSQRDPSLRKSGVGN+FIKNLDKSI
Sbjct: 53 GYAYVNFQQP--ADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFSAFG+ILSCKV DE G SKGYGFVHFET+EAA ++IEK+NGMLLN + VF
Sbjct: 111 DNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVF 169
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GK 241
VG+F RKERE ELG +AK FTNVYIKNFGED +DE+LKE+F +G S +VM ++ GK
Sbjct: 170 VGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGK 229
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
S+GFGFV++E E A+KAV NGKE++GK +YVGRAQKK ER ELKR+FE +K +R+
Sbjct: 230 SKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRIT 289
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLYVKNLDD IDDERLRKEF+PFGTITSAK
Sbjct: 290 RYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAK 324
Score = 158 bits (399), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 92/232 (39%), Positives = 133/232 (57%), Gaps = 16/232 (6%)
Query: 77 TERALDTMNFDALKGRPIRI----MWSQRDPSL--RKSGVGNVFIKNLDKSIDNKAMYDT 130
ERA++ MN L R + + +R+ L R NV+IKN + +D++ + +
Sbjct: 151 AERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKEL 210
Query: 131 FSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRK 190
F FG LS KV DE G SKG+GFV FE E A K+++++NG LN K ++VG+ +
Sbjct: 211 FGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKV 270
Query: 191 EREKELGEKAKLF----------TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDG 240
ER+ EL K + N+Y+KN + +DE+L++ F P+GTITS +VM G
Sbjct: 271 ERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGG 330
Query: 241 KSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRF 292
+S+GFGFV + SPE A KAV NG+ V K LYV AQ+K ER L ++
Sbjct: 331 RSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAHLTNQY 382
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 126/236 (53%), Gaps = 17/236 (7%)
Query: 102 DPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFET 160
+PS + ++++ +L + +Y+ FS G ILS +V +D S GY +V+F+
Sbjct: 2 NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 161 EEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKL 220
A ++++ +N ++ K V + +R+ L + N++IKN + +++ L
Sbjct: 62 PADAERALDTMNFDVIKGKPVRIM----WSQRDPSLRKSG--VGNIFIKNLDKSIDNKAL 115
Query: 221 KEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
+ F +G I S +V+ ++ S+G+GFV +E+ E AE+A++ NG ++ + ++VGR +
Sbjct: 116 YDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKS 175
Query: 281 KAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ ER EL R + N+Y+KN + +DDERL++ F FG S K
Sbjct: 176 RKEREAELGARAKEF----------TNVYIKNFGEDMDDERLKELFGKFGPALSVK 221
>gi|387017716|gb|AFJ50976.1| Polyadenylate-binding protein 1-like [Crotalus adamanteus]
Length = 636
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 197/275 (71%), Positives = 229/275 (83%), Gaps = 4/275 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD +KG+P+RIMWSQRDPSLRKSGVGN+FIKNLDKSI
Sbjct: 53 GYAYVNFQQP--ADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFSAFG+ILSCKV DE G SKGYGFVHFET+EAA ++IEK+NGMLLN + VF
Sbjct: 111 DNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVF 169
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GK 241
VG+F RKERE ELG +AK FTNVYIKNFGED +DE+LKE+F +G S +VM ++ GK
Sbjct: 170 VGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGK 229
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
S+GFGFV++E E A+KAV NGKE++GK +YVGRAQKK ER ELKR+FE +K +R+
Sbjct: 230 SKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRIT 289
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLYVKNLDD IDDERLRKEF+PFGTITSAK
Sbjct: 290 RYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAK 324
Score = 158 bits (399), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 92/232 (39%), Positives = 133/232 (57%), Gaps = 16/232 (6%)
Query: 77 TERALDTMNFDALKGRPIRI----MWSQRDPSL--RKSGVGNVFIKNLDKSIDNKAMYDT 130
ERA++ MN L R + + +R+ L R NV+IKN + +D++ + +
Sbjct: 151 AERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKEL 210
Query: 131 FSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRK 190
F FG LS KV DE G SKG+GFV FE E A K+++++NG LN K ++VG+ +
Sbjct: 211 FGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKV 270
Query: 191 EREKELGEKAKLF----------TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDG 240
ER+ EL K + N+Y+KN + +DE+L++ F P+GTITS +VM G
Sbjct: 271 ERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGG 330
Query: 241 KSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRF 292
+S+GFGFV + SPE A KAV NG+ V K LYV AQ+K ER L ++
Sbjct: 331 RSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAHLTNQY 382
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 126/236 (53%), Gaps = 17/236 (7%)
Query: 102 DPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFET 160
+PS + ++++ +L + +Y+ FS G ILS +V +D S GY +V+F+
Sbjct: 2 NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 161 EEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKL 220
A ++++ +N ++ K V + +R+ L + N++IKN + +++ L
Sbjct: 62 PADAERALDTMNFDVIKGKPVRIM----WSQRDPSLRKSG--VGNIFIKNLDKSIDNKAL 115
Query: 221 KEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
+ F +G I S +V+ ++ S+G+GFV +E+ E AE+A++ NG ++ + ++VGR +
Sbjct: 116 YDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKS 175
Query: 281 KAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ ER EL R + N+Y+KN + +DDERL++ F FG S K
Sbjct: 176 RKEREAELGARAKEF----------TNVYIKNFGEDMDDERLKELFGKFGPALSVK 221
>gi|410966844|ref|XP_003989937.1| PREDICTED: polyadenylate-binding protein 4 isoform 3 [Felis catus]
Length = 631
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 198/275 (72%), Positives = 229/275 (83%), Gaps = 4/275 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD +KG+PIRIMWSQRDPSLRKSGVGNVFIKNLDKSI
Sbjct: 53 GYAYVNFQQP--ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFSAFG+ILSCKV DE G SKGY FVHFET+EAA+K+IEK+NGMLLN + VF
Sbjct: 111 DNKALYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVF 169
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGK 241
VG+F RKERE ELG KAK FTNVYIKNFGE+ +DE LKE+F +G S +VM + GK
Sbjct: 170 VGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGK 229
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
S+GFGFV+YE E A KAV+ NGKE+ GK+++VGRAQKK ER ELKR+FE LK ER++
Sbjct: 230 SKGFGFVSYEKHEDANKAVEEMNGKEISGKVIFVGRAQKKVERQAELKRKFEQLKQERIS 289
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLY+KNLDD+IDDE+LRKEF+PFG+ITSAK
Sbjct: 290 RYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAK 324
Score = 165 bits (417), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 84/191 (43%), Positives = 122/191 (63%), Gaps = 10/191 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV+IKN + +D++++ + FS FG LS KV +D G SKG+GFV +E E ANK++E++
Sbjct: 192 NVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEM 251
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKLK 221
NG ++ K++FVG+ + ER+ EL K + N+YIKN + +DEKL+
Sbjct: 252 NGKEISGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLR 311
Query: 222 EMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKK 281
+ F P+G+ITS +VM DG+S+GFGFV + SPE A KAV NG+ V K LYV AQ+K
Sbjct: 312 KEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRK 371
Query: 282 AERTQELKRRF 292
ER L ++
Sbjct: 372 EERKAHLTNQY 382
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 122/228 (53%), Gaps = 17/228 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + +Y+ FS G +LS +V +D S GY +V+F+ A +++
Sbjct: 10 MASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERAL 69
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N ++ K + I +R+ L + NV+IKN + +++ L + F +G
Sbjct: 70 DTMNFDVIKGKPI----RIMWSQRDPSLRKSG--VGNVFIKNLDKSIDNKALYDTFSAFG 123
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S +V+ ++ S+G+ FV +E+ E A+KA++ NG ++ + ++VGR + + ER EL
Sbjct: 124 NILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAEL 183
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ + N+Y+KN + +DDE L++ F+ FG S K
Sbjct: 184 GAKAKEF----------TNVYIKNFGEEVDDESLKELFSQFGKTLSVK 221
>gi|31560656|ref|NP_032800.2| polyadenylate-binding protein 1 [Mus musculus]
gi|341941223|sp|P29341.2|PABP1_MOUSE RecName: Full=Polyadenylate-binding protein 1; Short=PABP-1;
Short=Poly(A)-binding protein 1
gi|13278026|gb|AAH03870.1| Poly(A) binding protein, cytoplasmic 1 [Mus musculus]
gi|15029950|gb|AAH11207.1| Poly(A) binding protein, cytoplasmic 1 [Mus musculus]
gi|18606321|gb|AAH23145.1| Poly(A) binding protein, cytoplasmic 1 [Mus musculus]
gi|26336853|dbj|BAC32110.1| unnamed protein product [Mus musculus]
gi|29145018|gb|AAH46233.1| Poly(A) binding protein, cytoplasmic 1 [Mus musculus]
gi|74144576|dbj|BAE36120.1| unnamed protein product [Mus musculus]
gi|74145579|dbj|BAE36203.1| unnamed protein product [Mus musculus]
gi|74179929|dbj|BAE36522.1| unnamed protein product [Mus musculus]
gi|74198265|dbj|BAE35302.1| unnamed protein product [Mus musculus]
gi|74198320|dbj|BAE35327.1| unnamed protein product [Mus musculus]
gi|74214225|dbj|BAE40360.1| unnamed protein product [Mus musculus]
gi|74223327|dbj|BAE21553.1| unnamed protein product [Mus musculus]
gi|148676871|gb|EDL08818.1| poly A binding protein, cytoplasmic 1 [Mus musculus]
Length = 636
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 197/275 (71%), Positives = 229/275 (83%), Gaps = 4/275 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD +KG+P+RIMWSQRDPSLRKSGVGN+FIKNLDKSI
Sbjct: 53 GYAYVNFQQP--ADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFSAFG+ILSCKV DE G SKGYGFVHFET+EAA ++IEK+NGMLLN + VF
Sbjct: 111 DNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVF 169
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GK 241
VG+F RKERE ELG +AK FTNVYIKNFGED +DE+LKE+F +G S +VM ++ GK
Sbjct: 170 VGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGK 229
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
S+GFGFV++E E A+KAV NGKE++GK +YVGRAQKK ER ELKR+FE +K +R+
Sbjct: 230 SKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRIT 289
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLYVKNLDD IDDERLRKEF+PFGTITSAK
Sbjct: 290 RYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAK 324
Score = 157 bits (398), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 92/232 (39%), Positives = 133/232 (57%), Gaps = 16/232 (6%)
Query: 77 TERALDTMNFDALKGRPIRI----MWSQRDPSL--RKSGVGNVFIKNLDKSIDNKAMYDT 130
ERA++ MN L R + + +R+ L R NV+IKN + +D++ + +
Sbjct: 151 AERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKEL 210
Query: 131 FSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRK 190
F FG LS KV DE G SKG+GFV FE E A K+++++NG LN K ++VG+ +
Sbjct: 211 FGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKV 270
Query: 191 EREKELGEKAKLF----------TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDG 240
ER+ EL K + N+Y+KN + +DE+L++ F P+GTITS +VM G
Sbjct: 271 ERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGG 330
Query: 241 KSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRF 292
+S+GFGFV + SPE A KAV NG+ V K LYV AQ+K ER L ++
Sbjct: 331 RSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAHLTNQY 382
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 126/236 (53%), Gaps = 17/236 (7%)
Query: 102 DPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFET 160
+PS + ++++ +L + +Y+ FS G ILS +V +D S GY +V+F+
Sbjct: 2 NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 161 EEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKL 220
A ++++ +N ++ K V + +R+ L + N++IKN + +++ L
Sbjct: 62 PADAERALDTMNFDVIKGKPVRIM----WSQRDPSLRKSG--VGNIFIKNLDKSIDNKAL 115
Query: 221 KEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
+ F +G I S +V+ ++ S+G+GFV +E+ E AE+A++ NG ++ + ++VGR +
Sbjct: 116 YDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKS 175
Query: 281 KAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ ER EL R + N+Y+KN + +DDERL++ F FG S K
Sbjct: 176 RKEREAELGARAKEF----------TNVYIKNFGEDMDDERLKELFGKFGPALSVK 221
>gi|395853072|ref|XP_003799044.1| PREDICTED: polyadenylate-binding protein 4 isoform 3 [Otolemur
garnettii]
Length = 633
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 198/275 (72%), Positives = 229/275 (83%), Gaps = 4/275 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD +KG+PIRIMWSQRDPSLRKSGVGNVFIKNLDKSI
Sbjct: 53 GYAYVNFQQP--ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFSAFG+ILSCKV DE G SKGY FVHFET+EAA+K+IEK+NGMLLN + VF
Sbjct: 111 DNKALYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVF 169
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGK 241
VG+F RKERE ELG KAK FTNVYIKNFGE+ +DE LKE+F +G S +VM + GK
Sbjct: 170 VGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGK 229
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
S+GFGFV+YE E A KAV+ NGKE+ GK+++VGRAQKK ER ELKR+FE LK ER++
Sbjct: 230 SKGFGFVSYEKHEDANKAVEEMNGKEISGKVIFVGRAQKKVERQAELKRKFEQLKQERIS 289
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLY+KNLDD+IDDE+LRKEF+PFG+ITSAK
Sbjct: 290 RYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAK 324
Score = 165 bits (417), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 84/191 (43%), Positives = 122/191 (63%), Gaps = 10/191 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV+IKN + +D++++ + FS FG LS KV +D G SKG+GFV +E E ANK++E++
Sbjct: 192 NVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEM 251
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKLK 221
NG ++ K++FVG+ + ER+ EL K + N+YIKN + +DEKL+
Sbjct: 252 NGKEISGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLR 311
Query: 222 EMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKK 281
+ F P+G+ITS +VM DG+S+GFGFV + SPE A KAV NG+ V K LYV AQ+K
Sbjct: 312 KEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRK 371
Query: 282 AERTQELKRRF 292
ER L ++
Sbjct: 372 EERKAHLTNQY 382
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 122/228 (53%), Gaps = 17/228 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + +Y+ FS G +LS +V +D S GY +V+F+ A +++
Sbjct: 10 MASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERAL 69
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N ++ K + I +R+ L + NV+IKN + +++ L + F +G
Sbjct: 70 DTMNFDVIKGKPI----RIMWSQRDPSLRKSG--VGNVFIKNLDKSIDNKALYDTFSAFG 123
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S +V+ ++ S+G+ FV +E+ E A+KA++ NG ++ + ++VGR + + ER EL
Sbjct: 124 NILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAEL 183
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ + N+Y+KN + +DDE L++ F+ FG S K
Sbjct: 184 GAKAKEF----------TNVYIKNFGEEVDDESLKELFSQFGKTLSVK 221
>gi|338721952|ref|XP_003364452.1| PREDICTED: polyadenylate-binding protein 4 isoform 3 [Equus
caballus]
Length = 631
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 198/275 (72%), Positives = 229/275 (83%), Gaps = 4/275 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD +KG+PIRIMWSQRDPSLRKSGVGNVFIKNLDKSI
Sbjct: 53 GYAYVNFQQP--ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFSAFG+ILSCKV DE G SKGY FVHFET+EAA+K+IEK+NGMLLN + VF
Sbjct: 111 DNKALYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVF 169
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGK 241
VG+F RKERE ELG KAK FTNVYIKNFGE+ +DE LKE+F +G S +VM + GK
Sbjct: 170 VGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGK 229
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
S+GFGFV+YE E A KAV+ NGKE+ GK+++VGRAQKK ER ELKR+FE LK ER++
Sbjct: 230 SKGFGFVSYEKHEDANKAVEEMNGKEISGKVIFVGRAQKKVERQAELKRKFEQLKQERIS 289
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLY+KNLDD+IDDE+LRKEF+PFG+ITSAK
Sbjct: 290 RYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAK 324
Score = 165 bits (417), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 84/191 (43%), Positives = 122/191 (63%), Gaps = 10/191 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV+IKN + +D++++ + FS FG LS KV +D G SKG+GFV +E E ANK++E++
Sbjct: 192 NVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEM 251
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKLK 221
NG ++ K++FVG+ + ER+ EL K + N+YIKN + +DEKL+
Sbjct: 252 NGKEISGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLR 311
Query: 222 EMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKK 281
+ F P+G+ITS +VM DG+S+GFGFV + SPE A KAV NG+ V K LYV AQ+K
Sbjct: 312 KEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRK 371
Query: 282 AERTQELKRRF 292
ER L ++
Sbjct: 372 EERKAHLTNQY 382
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 122/228 (53%), Gaps = 17/228 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + +Y+ FS G +LS +V +D S GY +V+F+ A +++
Sbjct: 10 MASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERAL 69
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N ++ K + I +R+ L + NV+IKN + +++ L + F +G
Sbjct: 70 DTMNFDVIKGKPI----RIMWSQRDPSLRKSG--VGNVFIKNLDKSIDNKALYDTFSAFG 123
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S +V+ ++ S+G+ FV +E+ E A+KA++ NG ++ + ++VGR + + ER EL
Sbjct: 124 NILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAEL 183
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ + N+Y+KN + +DDE L++ F+ FG S K
Sbjct: 184 GAKAKEF----------TNVYIKNFGEEVDDESLKELFSQFGKTLSVK 221
>gi|344287653|ref|XP_003415567.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Loxodonta
africana]
Length = 660
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 198/275 (72%), Positives = 229/275 (83%), Gaps = 4/275 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD +KG+PIRIMWSQRDPSLRKSGVGNVFIKNLDKSI
Sbjct: 53 GYAYVNFQQP--ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFSAFG+ILSCKV DE G SKGY FVHFET+EAA+K+IEK+NGMLLN + VF
Sbjct: 111 DNKALYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVF 169
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGK 241
VG+F RKERE ELG KAK FTNVYIKNFGE+ +DE LKE+F +G S +VM + GK
Sbjct: 170 VGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGK 229
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
S+GFGFV+YE E A KAV+ NGKE+ GK+++VGRAQKK ER ELKR+FE LK ER++
Sbjct: 230 SKGFGFVSYEKHEDANKAVEEMNGKEISGKVIFVGRAQKKVERQAELKRKFEQLKQERIS 289
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLY+KNLDD+IDDE+LRKEF+PFG+ITSAK
Sbjct: 290 RYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAK 324
Score = 164 bits (416), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 84/191 (43%), Positives = 122/191 (63%), Gaps = 10/191 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV+IKN + +D++++ + FS FG LS KV +D G SKG+GFV +E E ANK++E++
Sbjct: 192 NVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEM 251
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKLK 221
NG ++ K++FVG+ + ER+ EL K + N+YIKN + +DEKL+
Sbjct: 252 NGKEISGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLR 311
Query: 222 EMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKK 281
+ F P+G+ITS +VM DG+S+GFGFV + SPE A KAV NG+ V K LYV AQ+K
Sbjct: 312 KEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRK 371
Query: 282 AERTQELKRRF 292
ER L ++
Sbjct: 372 EERKAHLTNQY 382
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 122/228 (53%), Gaps = 17/228 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + +Y+ FS G +LS +V +D S GY +V+F+ A +++
Sbjct: 10 MASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERAL 69
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N ++ K + I +R+ L + NV+IKN + +++ L + F +G
Sbjct: 70 DTMNFDVIKGKPI----RIMWSQRDPSLRKSG--VGNVFIKNLDKSIDNKALYDTFSAFG 123
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S +V+ ++ S+G+ FV +E+ E A+KA++ NG ++ + ++VGR + + ER EL
Sbjct: 124 NILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAEL 183
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ + N+Y+KN + +DDE L++ F+ FG S K
Sbjct: 184 GAKAKEF----------TNVYIKNFGEEVDDESLKELFSQFGKTLSVK 221
>gi|19526272|gb|AAL89666.1|AF411956_7 polyA-binding protein [Takifugu rubripes]
Length = 623
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 198/275 (72%), Positives = 231/275 (84%), Gaps = 4/275 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD +KG+PIRIMWSQRDPSLRKSGVGNVFIKNLDKSI
Sbjct: 53 GYAYVNFSQP--ADAERALDTMNFDVVKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFSAFG+ILSCKV DE G SKGY FVHFET++AA+++IEK+NGMLLN + VF
Sbjct: 111 DNKALYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQDAADRAIEKMNGMLLNDRKVF 169
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGK 241
VG+F RKERE ELG KAK FTNVYIKNFG+D +DE+LKE+F+ YG S +VM + GK
Sbjct: 170 VGRFKSRKEREAELGAKAKEFTNVYIKNFGDDMDDERLKELFDKYGKTLSVKVMMDPTGK 229
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
SRGFGFV+YE E A KAV+ NG E++GK ++VGRAQKK ER ELKR+FEMLK ER++
Sbjct: 230 SRGFGFVSYEKHEDANKAVEDMNGTELNGKTVFVGRAQKKNERQAELKRKFEMLKQERIS 289
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLY+KNLDD+IDDE+LRKEF+PFG+ITSAK
Sbjct: 290 RYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAK 324
Score = 160 bits (405), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 83/191 (43%), Positives = 117/191 (61%), Gaps = 10/191 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV+IKN +D++ + + F +G LS KV D G S+G+GFV +E E ANK++E +
Sbjct: 192 NVYIKNFGDDMDDERLKELFDKYGKTLSVKVMMDPTGKSRGFGFVSYEKHEDANKAVEDM 251
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKLK 221
NG LN K VFVG+ + ER+ EL K ++ N+YIKN + +DEKL+
Sbjct: 252 NGTELNGKTVFVGRAQKKNERQAELKRKFEMLKQERISRYQGVNLYIKNLDDTIDDEKLR 311
Query: 222 EMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKK 281
+ F P+G+ITS +VM +G+S+GFGFV + SPE A KAV NG+ V K LYV AQ+K
Sbjct: 312 KEFSPFGSITSAKVMLEEGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRK 371
Query: 282 AERTQELKRRF 292
ER L ++
Sbjct: 372 EERKAHLTNQY 382
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 121/228 (53%), Gaps = 17/228 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L I +Y+ FS G +LS +V +D S GY +V+F A +++
Sbjct: 10 MASLYVGDLHPDITEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFSQPADAERAL 69
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N ++ K + I +R+ L + NV+IKN + +++ L + F +G
Sbjct: 70 DTMNFDVVKGKPI----RIMWSQRDPSLRKSG--VGNVFIKNLDKSIDNKALYDTFSAFG 123
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S +V+ ++ S+G+ FV +E+ + A++A++ NG ++ + ++VGR + + ER EL
Sbjct: 124 NILSCKVVCDENGSKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSRKEREAEL 183
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ + N+Y+KN D +DDERL++ F +G S K
Sbjct: 184 GAKAKEF----------TNVYIKNFGDDMDDERLKELFDKYGKTLSVK 221
>gi|410966840|ref|XP_003989935.1| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Felis catus]
Length = 660
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 198/275 (72%), Positives = 229/275 (83%), Gaps = 4/275 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD +KG+PIRIMWSQRDPSLRKSGVGNVFIKNLDKSI
Sbjct: 53 GYAYVNFQQP--ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFSAFG+ILSCKV DE G SKGY FVHFET+EAA+K+IEK+NGMLLN + VF
Sbjct: 111 DNKALYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVF 169
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGK 241
VG+F RKERE ELG KAK FTNVYIKNFGE+ +DE LKE+F +G S +VM + GK
Sbjct: 170 VGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGK 229
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
S+GFGFV+YE E A KAV+ NGKE+ GK+++VGRAQKK ER ELKR+FE LK ER++
Sbjct: 230 SKGFGFVSYEKHEDANKAVEEMNGKEISGKVIFVGRAQKKVERQAELKRKFEQLKQERIS 289
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLY+KNLDD+IDDE+LRKEF+PFG+ITSAK
Sbjct: 290 RYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAK 324
Score = 165 bits (417), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 84/191 (43%), Positives = 122/191 (63%), Gaps = 10/191 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV+IKN + +D++++ + FS FG LS KV +D G SKG+GFV +E E ANK++E++
Sbjct: 192 NVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEM 251
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKLK 221
NG ++ K++FVG+ + ER+ EL K + N+YIKN + +DEKL+
Sbjct: 252 NGKEISGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLR 311
Query: 222 EMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKK 281
+ F P+G+ITS +VM DG+S+GFGFV + SPE A KAV NG+ V K LYV AQ+K
Sbjct: 312 KEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRK 371
Query: 282 AERTQELKRRF 292
ER L ++
Sbjct: 372 EERKAHLTNQY 382
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 122/228 (53%), Gaps = 17/228 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + +Y+ FS G +LS +V +D S GY +V+F+ A +++
Sbjct: 10 MASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERAL 69
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N ++ K + I +R+ L + NV+IKN + +++ L + F +G
Sbjct: 70 DTMNFDVIKGKPI----RIMWSQRDPSLRKSG--VGNVFIKNLDKSIDNKALYDTFSAFG 123
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S +V+ ++ S+G+ FV +E+ E A+KA++ NG ++ + ++VGR + + ER EL
Sbjct: 124 NILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAEL 183
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ + N+Y+KN + +DDE L++ F+ FG S K
Sbjct: 184 GAKAKEF----------TNVYIKNFGEEVDDESLKELFSQFGKTLSVK 221
>gi|395853068|ref|XP_003799042.1| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Otolemur
garnettii]
Length = 662
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 198/275 (72%), Positives = 229/275 (83%), Gaps = 4/275 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD +KG+PIRIMWSQRDPSLRKSGVGNVFIKNLDKSI
Sbjct: 53 GYAYVNFQQP--ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFSAFG+ILSCKV DE G SKGY FVHFET+EAA+K+IEK+NGMLLN + VF
Sbjct: 111 DNKALYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVF 169
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGK 241
VG+F RKERE ELG KAK FTNVYIKNFGE+ +DE LKE+F +G S +VM + GK
Sbjct: 170 VGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGK 229
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
S+GFGFV+YE E A KAV+ NGKE+ GK+++VGRAQKK ER ELKR+FE LK ER++
Sbjct: 230 SKGFGFVSYEKHEDANKAVEEMNGKEISGKVIFVGRAQKKVERQAELKRKFEQLKQERIS 289
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLY+KNLDD+IDDE+LRKEF+PFG+ITSAK
Sbjct: 290 RYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAK 324
Score = 165 bits (417), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 84/191 (43%), Positives = 122/191 (63%), Gaps = 10/191 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV+IKN + +D++++ + FS FG LS KV +D G SKG+GFV +E E ANK++E++
Sbjct: 192 NVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEM 251
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKLK 221
NG ++ K++FVG+ + ER+ EL K + N+YIKN + +DEKL+
Sbjct: 252 NGKEISGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLR 311
Query: 222 EMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKK 281
+ F P+G+ITS +VM DG+S+GFGFV + SPE A KAV NG+ V K LYV AQ+K
Sbjct: 312 KEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRK 371
Query: 282 AERTQELKRRF 292
ER L ++
Sbjct: 372 EERKAHLTNQY 382
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 122/228 (53%), Gaps = 17/228 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + +Y+ FS G +LS +V +D S GY +V+F+ A +++
Sbjct: 10 MASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERAL 69
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N ++ K + I +R+ L + NV+IKN + +++ L + F +G
Sbjct: 70 DTMNFDVIKGKPI----RIMWSQRDPSLRKSG--VGNVFIKNLDKSIDNKALYDTFSAFG 123
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S +V+ ++ S+G+ FV +E+ E A+KA++ NG ++ + ++VGR + + ER EL
Sbjct: 124 NILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAEL 183
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ + N+Y+KN + +DDE L++ F+ FG S K
Sbjct: 184 GAKAKEF----------TNVYIKNFGEEVDDESLKELFSQFGKTLSVK 221
>gi|350585908|ref|XP_003482078.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Sus scrofa]
Length = 660
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 198/275 (72%), Positives = 229/275 (83%), Gaps = 4/275 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD +KG+PIRIMWSQRDPSLRKSGVGNVFIKNLDKSI
Sbjct: 53 GYAYVNFQQP--ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFSAFG+ILSCKV DE G SKGY FVHFET+EAA+K+IEK+NGMLLN + VF
Sbjct: 111 DNKALYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVF 169
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGK 241
VG+F RKERE ELG KAK FTNVYIKNFGE+ +DE LKE+F +G S +VM + GK
Sbjct: 170 VGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDENLKELFSQFGKTLSVKVMRDPSGK 229
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
S+GFGFV+YE E A KAV+ NGKE+ GK+++VGRAQKK ER ELKR+FE LK ER++
Sbjct: 230 SKGFGFVSYEKHEDANKAVEEMNGKEISGKVIFVGRAQKKVERQAELKRKFEQLKQERIS 289
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLY+KNLDD+IDDE+LRKEF+PFG+ITSAK
Sbjct: 290 RYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAK 324
Score = 163 bits (413), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 84/191 (43%), Positives = 121/191 (63%), Gaps = 10/191 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV+IKN + +D++ + + FS FG LS KV +D G SKG+GFV +E E ANK++E++
Sbjct: 192 NVYIKNFGEEVDDENLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEM 251
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKLK 221
NG ++ K++FVG+ + ER+ EL K + N+YIKN + +DEKL+
Sbjct: 252 NGKEISGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLR 311
Query: 222 EMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKK 281
+ F P+G+ITS +VM DG+S+GFGFV + SPE A KAV NG+ V K LYV AQ+K
Sbjct: 312 KEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRK 371
Query: 282 AERTQELKRRF 292
ER L ++
Sbjct: 372 EERKAHLTNQY 382
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 122/228 (53%), Gaps = 17/228 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + +Y+ FS G +LS +V +D S GY +V+F+ A +++
Sbjct: 10 MASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERAL 69
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N ++ K + I +R+ L + NV+IKN + +++ L + F +G
Sbjct: 70 DTMNFDVIKGKPI----RIMWSQRDPSLRKSG--VGNVFIKNLDKSIDNKALYDTFSAFG 123
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S +V+ ++ S+G+ FV +E+ E A+KA++ NG ++ + ++VGR + + ER EL
Sbjct: 124 NILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAEL 183
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ + N+Y+KN + +DDE L++ F+ FG S K
Sbjct: 184 GAKAKEF----------TNVYIKNFGEEVDDENLKELFSQFGKTLSVK 221
>gi|338721949|ref|XP_003364451.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Equus
caballus]
Length = 660
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 198/275 (72%), Positives = 229/275 (83%), Gaps = 4/275 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD +KG+PIRIMWSQRDPSLRKSGVGNVFIKNLDKSI
Sbjct: 53 GYAYVNFQQP--ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFSAFG+ILSCKV DE G SKGY FVHFET+EAA+K+IEK+NGMLLN + VF
Sbjct: 111 DNKALYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVF 169
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGK 241
VG+F RKERE ELG KAK FTNVYIKNFGE+ +DE LKE+F +G S +VM + GK
Sbjct: 170 VGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGK 229
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
S+GFGFV+YE E A KAV+ NGKE+ GK+++VGRAQKK ER ELKR+FE LK ER++
Sbjct: 230 SKGFGFVSYEKHEDANKAVEEMNGKEISGKVIFVGRAQKKVERQAELKRKFEQLKQERIS 289
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLY+KNLDD+IDDE+LRKEF+PFG+ITSAK
Sbjct: 290 RYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAK 324
Score = 165 bits (417), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 84/191 (43%), Positives = 122/191 (63%), Gaps = 10/191 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV+IKN + +D++++ + FS FG LS KV +D G SKG+GFV +E E ANK++E++
Sbjct: 192 NVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEM 251
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKLK 221
NG ++ K++FVG+ + ER+ EL K + N+YIKN + +DEKL+
Sbjct: 252 NGKEISGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLR 311
Query: 222 EMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKK 281
+ F P+G+ITS +VM DG+S+GFGFV + SPE A KAV NG+ V K LYV AQ+K
Sbjct: 312 KEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRK 371
Query: 282 AERTQELKRRF 292
ER L ++
Sbjct: 372 EERKAHLTNQY 382
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 122/228 (53%), Gaps = 17/228 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + +Y+ FS G +LS +V +D S GY +V+F+ A +++
Sbjct: 10 MASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERAL 69
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N ++ K + I +R+ L + NV+IKN + +++ L + F +G
Sbjct: 70 DTMNFDVIKGKPI----RIMWSQRDPSLRKSG--VGNVFIKNLDKSIDNKALYDTFSAFG 123
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S +V+ ++ S+G+ FV +E+ E A+KA++ NG ++ + ++VGR + + ER EL
Sbjct: 124 NILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAEL 183
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ + N+Y+KN + +DDE L++ F+ FG S K
Sbjct: 184 GAKAKEF----------TNVYIKNFGEEVDDESLKELFSQFGKTLSVK 221
>gi|410966842|ref|XP_003989936.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Felis catus]
Length = 644
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 198/275 (72%), Positives = 229/275 (83%), Gaps = 4/275 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD +KG+PIRIMWSQRDPSLRKSGVGNVFIKNLDKSI
Sbjct: 53 GYAYVNFQQP--ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFSAFG+ILSCKV DE G SKGY FVHFET+EAA+K+IEK+NGMLLN + VF
Sbjct: 111 DNKALYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVF 169
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGK 241
VG+F RKERE ELG KAK FTNVYIKNFGE+ +DE LKE+F +G S +VM + GK
Sbjct: 170 VGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGK 229
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
S+GFGFV+YE E A KAV+ NGKE+ GK+++VGRAQKK ER ELKR+FE LK ER++
Sbjct: 230 SKGFGFVSYEKHEDANKAVEEMNGKEISGKVIFVGRAQKKVERQAELKRKFEQLKQERIS 289
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLY+KNLDD+IDDE+LRKEF+PFG+ITSAK
Sbjct: 290 RYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAK 324
Score = 164 bits (416), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 84/191 (43%), Positives = 122/191 (63%), Gaps = 10/191 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV+IKN + +D++++ + FS FG LS KV +D G SKG+GFV +E E ANK++E++
Sbjct: 192 NVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEM 251
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKLK 221
NG ++ K++FVG+ + ER+ EL K + N+YIKN + +DEKL+
Sbjct: 252 NGKEISGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLR 311
Query: 222 EMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKK 281
+ F P+G+ITS +VM DG+S+GFGFV + SPE A KAV NG+ V K LYV AQ+K
Sbjct: 312 KEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRK 371
Query: 282 AERTQELKRRF 292
ER L ++
Sbjct: 372 EERKAHLTNQY 382
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 122/228 (53%), Gaps = 17/228 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + +Y+ FS G +LS +V +D S GY +V+F+ A +++
Sbjct: 10 MASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERAL 69
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N ++ K + I +R+ L + NV+IKN + +++ L + F +G
Sbjct: 70 DTMNFDVIKGKPI----RIMWSQRDPSLRKSG--VGNVFIKNLDKSIDNKALYDTFSAFG 123
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S +V+ ++ S+G+ FV +E+ E A+KA++ NG ++ + ++VGR + + ER EL
Sbjct: 124 NILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAEL 183
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ + N+Y+KN + +DDE L++ F+ FG S K
Sbjct: 184 GAKAKEF----------TNVYIKNFGEEVDDESLKELFSQFGKTLSVK 221
>gi|395853070|ref|XP_003799043.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Otolemur
garnettii]
Length = 646
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 198/275 (72%), Positives = 229/275 (83%), Gaps = 4/275 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD +KG+PIRIMWSQRDPSLRKSGVGNVFIKNLDKSI
Sbjct: 53 GYAYVNFQQP--ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFSAFG+ILSCKV DE G SKGY FVHFET+EAA+K+IEK+NGMLLN + VF
Sbjct: 111 DNKALYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVF 169
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGK 241
VG+F RKERE ELG KAK FTNVYIKNFGE+ +DE LKE+F +G S +VM + GK
Sbjct: 170 VGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGK 229
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
S+GFGFV+YE E A KAV+ NGKE+ GK+++VGRAQKK ER ELKR+FE LK ER++
Sbjct: 230 SKGFGFVSYEKHEDANKAVEEMNGKEISGKVIFVGRAQKKVERQAELKRKFEQLKQERIS 289
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLY+KNLDD+IDDE+LRKEF+PFG+ITSAK
Sbjct: 290 RYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAK 324
Score = 164 bits (416), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 84/191 (43%), Positives = 122/191 (63%), Gaps = 10/191 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV+IKN + +D++++ + FS FG LS KV +D G SKG+GFV +E E ANK++E++
Sbjct: 192 NVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEM 251
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKLK 221
NG ++ K++FVG+ + ER+ EL K + N+YIKN + +DEKL+
Sbjct: 252 NGKEISGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLR 311
Query: 222 EMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKK 281
+ F P+G+ITS +VM DG+S+GFGFV + SPE A KAV NG+ V K LYV AQ+K
Sbjct: 312 KEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRK 371
Query: 282 AERTQELKRRF 292
ER L ++
Sbjct: 372 EERKAHLTNQY 382
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 122/228 (53%), Gaps = 17/228 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + +Y+ FS G +LS +V +D S GY +V+F+ A +++
Sbjct: 10 MASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERAL 69
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N ++ K + I +R+ L + NV+IKN + +++ L + F +G
Sbjct: 70 DTMNFDVIKGKPI----RIMWSQRDPSLRKSG--VGNVFIKNLDKSIDNKALYDTFSAFG 123
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S +V+ ++ S+G+ FV +E+ E A+KA++ NG ++ + ++VGR + + ER EL
Sbjct: 124 NILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAEL 183
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ + N+Y+KN + +DDE L++ F+ FG S K
Sbjct: 184 GAKAKEF----------TNVYIKNFGEEVDDESLKELFSQFGKTLSVK 221
>gi|410898224|ref|XP_003962598.1| PREDICTED: polyadenylate-binding protein 4-like [Takifugu rubripes]
Length = 653
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 198/275 (72%), Positives = 231/275 (84%), Gaps = 4/275 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD +KG+PIRIMWSQRDPSLRKSGVGNVFIKNLDKSI
Sbjct: 53 GYAYVNFSQP--ADAERALDTMNFDVVKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFSAFG+ILSCKV DE G SKGY FVHFET++AA+++IEK+NGMLLN + VF
Sbjct: 111 DNKALYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQDAADRAIEKMNGMLLNDRKVF 169
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGK 241
VG+F RKERE ELG KAK FTNVYIKNFG+D +DE+LKE+F+ YG S +VM + GK
Sbjct: 170 VGRFKSRKEREAELGAKAKEFTNVYIKNFGDDMDDERLKELFDKYGKTLSVKVMMDPTGK 229
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
SRGFGFV+YE E A KAV+ NG E++GK ++VGRAQKK ER ELKR+FEMLK ER++
Sbjct: 230 SRGFGFVSYEKHEDANKAVEDMNGTELNGKTVFVGRAQKKNERQAELKRKFEMLKQERIS 289
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLY+KNLDD+IDDE+LRKEF+PFG+ITSAK
Sbjct: 290 RYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAK 324
Score = 160 bits (405), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 83/191 (43%), Positives = 117/191 (61%), Gaps = 10/191 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV+IKN +D++ + + F +G LS KV D G S+G+GFV +E E ANK++E +
Sbjct: 192 NVYIKNFGDDMDDERLKELFDKYGKTLSVKVMMDPTGKSRGFGFVSYEKHEDANKAVEDM 251
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKLK 221
NG LN K VFVG+ + ER+ EL K ++ N+YIKN + +DEKL+
Sbjct: 252 NGTELNGKTVFVGRAQKKNERQAELKRKFEMLKQERISRYQGVNLYIKNLDDTIDDEKLR 311
Query: 222 EMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKK 281
+ F P+G+ITS +VM +G+S+GFGFV + SPE A KAV NG+ V K LYV AQ+K
Sbjct: 312 KEFSPFGSITSAKVMLEEGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRK 371
Query: 282 AERTQELKRRF 292
ER L ++
Sbjct: 372 EERKAHLTNQY 382
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 122/228 (53%), Gaps = 17/228 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L I +Y+ FS G +LS +V +D S GY +V+F A +++
Sbjct: 10 MASLYVGDLHPDITEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFSQPADAERAL 69
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N ++ K + I +R+ L + NV+IKN + +++ L + F +G
Sbjct: 70 DTMNFDVVKGKPI----RIMWSQRDPSLRKSG--VGNVFIKNLDKSIDNKALYDTFSAFG 123
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S +V+ ++ S+G+ FV +E+ + A++A++ NG ++ + ++VGR + + ER EL
Sbjct: 124 NILSCKVVCDENGSKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSRKEREAEL 183
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ + + N+Y+KN D +DDERL++ F +G S K
Sbjct: 184 GAKAK----------EFTNVYIKNFGDDMDDERLKELFDKYGKTLSVK 221
>gi|344287651|ref|XP_003415566.1| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Loxodonta
africana]
Length = 644
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 198/275 (72%), Positives = 229/275 (83%), Gaps = 4/275 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD +KG+PIRIMWSQRDPSLRKSGVGNVFIKNLDKSI
Sbjct: 53 GYAYVNFQQP--ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFSAFG+ILSCKV DE G SKGY FVHFET+EAA+K+IEK+NGMLLN + VF
Sbjct: 111 DNKALYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVF 169
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGK 241
VG+F RKERE ELG KAK FTNVYIKNFGE+ +DE LKE+F +G S +VM + GK
Sbjct: 170 VGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGK 229
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
S+GFGFV+YE E A KAV+ NGKE+ GK+++VGRAQKK ER ELKR+FE LK ER++
Sbjct: 230 SKGFGFVSYEKHEDANKAVEEMNGKEISGKVIFVGRAQKKVERQAELKRKFEQLKQERIS 289
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLY+KNLDD+IDDE+LRKEF+PFG+ITSAK
Sbjct: 290 RYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAK 324
Score = 164 bits (416), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 84/191 (43%), Positives = 122/191 (63%), Gaps = 10/191 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV+IKN + +D++++ + FS FG LS KV +D G SKG+GFV +E E ANK++E++
Sbjct: 192 NVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEM 251
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKLK 221
NG ++ K++FVG+ + ER+ EL K + N+YIKN + +DEKL+
Sbjct: 252 NGKEISGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLR 311
Query: 222 EMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKK 281
+ F P+G+ITS +VM DG+S+GFGFV + SPE A KAV NG+ V K LYV AQ+K
Sbjct: 312 KEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRK 371
Query: 282 AERTQELKRRF 292
ER L ++
Sbjct: 372 EERKAHLTNQY 382
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 122/228 (53%), Gaps = 17/228 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + +Y+ FS G +LS +V +D S GY +V+F+ A +++
Sbjct: 10 MASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERAL 69
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N ++ K + I +R+ L + NV+IKN + +++ L + F +G
Sbjct: 70 DTMNFDVIKGKPI----RIMWSQRDPSLRKSG--VGNVFIKNLDKSIDNKALYDTFSAFG 123
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S +V+ ++ S+G+ FV +E+ E A+KA++ NG ++ + ++VGR + + ER EL
Sbjct: 124 NILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAEL 183
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ + N+Y+KN + +DDE L++ F+ FG S K
Sbjct: 184 GAKAKEF----------TNVYIKNFGEEVDDESLKELFSQFGKTLSVK 221
>gi|149693775|ref|XP_001503500.1| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Equus
caballus]
Length = 644
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 198/275 (72%), Positives = 229/275 (83%), Gaps = 4/275 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD +KG+PIRIMWSQRDPSLRKSGVGNVFIKNLDKSI
Sbjct: 53 GYAYVNFQQP--ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFSAFG+ILSCKV DE G SKGY FVHFET+EAA+K+IEK+NGMLLN + VF
Sbjct: 111 DNKALYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVF 169
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGK 241
VG+F RKERE ELG KAK FTNVYIKNFGE+ +DE LKE+F +G S +VM + GK
Sbjct: 170 VGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGK 229
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
S+GFGFV+YE E A KAV+ NGKE+ GK+++VGRAQKK ER ELKR+FE LK ER++
Sbjct: 230 SKGFGFVSYEKHEDANKAVEEMNGKEISGKVIFVGRAQKKVERQAELKRKFEQLKQERIS 289
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLY+KNLDD+IDDE+LRKEF+PFG+ITSAK
Sbjct: 290 RYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAK 324
Score = 165 bits (417), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 84/191 (43%), Positives = 122/191 (63%), Gaps = 10/191 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV+IKN + +D++++ + FS FG LS KV +D G SKG+GFV +E E ANK++E++
Sbjct: 192 NVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEM 251
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKLK 221
NG ++ K++FVG+ + ER+ EL K + N+YIKN + +DEKL+
Sbjct: 252 NGKEISGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLR 311
Query: 222 EMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKK 281
+ F P+G+ITS +VM DG+S+GFGFV + SPE A KAV NG+ V K LYV AQ+K
Sbjct: 312 KEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRK 371
Query: 282 AERTQELKRRF 292
ER L ++
Sbjct: 372 EERKAHLTNQY 382
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 122/228 (53%), Gaps = 17/228 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + +Y+ FS G +LS +V +D S GY +V+F+ A +++
Sbjct: 10 MASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERAL 69
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N ++ K + I +R+ L + NV+IKN + +++ L + F +G
Sbjct: 70 DTMNFDVIKGKPI----RIMWSQRDPSLRKSG--VGNVFIKNLDKSIDNKALYDTFSAFG 123
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S +V+ ++ S+G+ FV +E+ E A+KA++ NG ++ + ++VGR + + ER EL
Sbjct: 124 NILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAEL 183
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ + N+Y+KN + +DDE L++ F+ FG S K
Sbjct: 184 GAKAKEF----------TNVYIKNFGEEVDDESLKELFSQFGKTLSVK 221
>gi|444706907|gb|ELW48224.1| Polyadenylate-binding protein 4 [Tupaia chinensis]
Length = 692
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 198/275 (72%), Positives = 229/275 (83%), Gaps = 4/275 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD +KG+PIRIMWSQRDPSLRKSGVGNVFIKNLDKSI
Sbjct: 53 GYAYVNFQQP--ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFSAFG+ILSCKV DE G SKGY FVHFET+EAA+K+IEK+NGMLLN + VF
Sbjct: 111 DNKALYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVF 169
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GK 241
VG+F RKERE ELG KAK FTNVYIKNFGE+ +DE LKE+F +G S +VM + GK
Sbjct: 170 VGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPTGK 229
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
S+GFGFV+YE E A KAV+ NGKE+ GK+++VGRAQKK ER ELKR+FE LK ER++
Sbjct: 230 SKGFGFVSYEKHEDANKAVEEMNGKEISGKVIFVGRAQKKVERQAELKRKFEQLKQERIS 289
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLY+KNLDD+IDDE+LRKEF+PFG+ITSAK
Sbjct: 290 RYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAK 324
Score = 165 bits (417), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 84/191 (43%), Positives = 122/191 (63%), Gaps = 10/191 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV+IKN + +D++++ + FS FG LS KV +D G SKG+GFV +E E ANK++E++
Sbjct: 192 NVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPTGKSKGFGFVSYEKHEDANKAVEEM 251
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKLK 221
NG ++ K++FVG+ + ER+ EL K + N+YIKN + +DEKL+
Sbjct: 252 NGKEISGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLR 311
Query: 222 EMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKK 281
+ F P+G+ITS +VM DG+S+GFGFV + SPE A KAV NG+ V K LYV AQ+K
Sbjct: 312 KEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRK 371
Query: 282 AERTQELKRRF 292
ER L ++
Sbjct: 372 EERKAHLTNQY 382
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 122/228 (53%), Gaps = 17/228 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + +Y+ FS G +LS +V +D S GY +V+F+ A +++
Sbjct: 10 MASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERAL 69
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N ++ K + I +R+ L + NV+IKN + +++ L + F +G
Sbjct: 70 DTMNFDVIKGKPI----RIMWSQRDPSLRKSG--VGNVFIKNLDKSIDNKALYDTFSAFG 123
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S +V+ ++ S+G+ FV +E+ E A+KA++ NG ++ + ++VGR + + ER EL
Sbjct: 124 NILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAEL 183
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ + N+Y+KN + +DDE L++ F+ FG S K
Sbjct: 184 GAKAKEF----------TNVYIKNFGEEVDDESLKELFSQFGKTLSVK 221
>gi|351713677|gb|EHB16596.1| Polyadenylate-binding protein 4 [Heterocephalus glaber]
Length = 661
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 198/275 (72%), Positives = 229/275 (83%), Gaps = 4/275 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD +KG+PIRIMWSQRDPSLRKSGVGNVFIKNLDKSI
Sbjct: 53 GYAYVNFQQP--ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFSAFG+ILSCKV DE G SKGY FVHFET+EAA+K+IEK+NGMLLN + VF
Sbjct: 111 DNKALYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVF 169
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGK 241
VG+F RKERE ELG KAK FTNVYIKNFGE+ +DE LKE+F +G S +VM + GK
Sbjct: 170 VGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGK 229
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
S+GFGFV+YE E A KAV+ NGKE+ GK+++VGRAQKK ER ELKR+FE LK ER++
Sbjct: 230 SKGFGFVSYEKHEDANKAVEEMNGKEISGKVIFVGRAQKKVERQAELKRKFEQLKQERIS 289
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLY+KNLDD+IDDE+LRKEF+PFG+ITSAK
Sbjct: 290 RYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAK 324
Score = 165 bits (417), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 84/191 (43%), Positives = 122/191 (63%), Gaps = 10/191 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV+IKN + +D++++ + FS FG LS KV +D G SKG+GFV +E E ANK++E++
Sbjct: 192 NVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEM 251
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKLK 221
NG ++ K++FVG+ + ER+ EL K + N+YIKN + +DEKL+
Sbjct: 252 NGKEISGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLR 311
Query: 222 EMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKK 281
+ F P+G+ITS +VM DG+S+GFGFV + SPE A KAV NG+ V K LYV AQ+K
Sbjct: 312 KEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRK 371
Query: 282 AERTQELKRRF 292
ER L ++
Sbjct: 372 EERKAHLTNQY 382
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 122/228 (53%), Gaps = 17/228 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + +Y+ FS G +LS +V +D S GY +V+F+ A +++
Sbjct: 10 MASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERAL 69
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N ++ K + I +R+ L + NV+IKN + +++ L + F +G
Sbjct: 70 DTMNFDVIKGKPI----RIMWSQRDPSLRKSG--VGNVFIKNLDKSIDNKALYDTFSAFG 123
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S +V+ ++ S+G+ FV +E+ E A+KA++ NG ++ + ++VGR + + ER EL
Sbjct: 124 NILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAEL 183
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ + N+Y+KN + +DDE L++ F+ FG S K
Sbjct: 184 GAKAKEF----------TNVYIKNFGEEVDDESLKELFSQFGKTLSVK 221
>gi|327283838|ref|XP_003226647.1| PREDICTED: polyadenylate-binding protein 1-like [Anolis
carolinensis]
Length = 636
Score = 403 bits (1036), Expect = e-110, Method: Compositional matrix adjust.
Identities = 197/275 (71%), Positives = 229/275 (83%), Gaps = 4/275 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD +KG+P+RIMWSQRDPSLRKSGVGN+FIKNLDKSI
Sbjct: 53 GYAYVNFQQP--ADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFSAFG+ILSCKV DE G SKGYGFVHFET+EAA ++IEK+NGMLLN + VF
Sbjct: 111 DNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVF 169
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GK 241
VG+F RKERE ELG +AK FTNVYIKNFGED +DE+LKE+F +G S +VM ++ GK
Sbjct: 170 VGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGK 229
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
S+GFGFV++E E A+KAV NGKE++GK +YVGRAQKK ER ELKR+FE +K +R+
Sbjct: 230 SKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRIT 289
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLYVKNLDD IDDERLRKEF+PFGTITSAK
Sbjct: 290 RYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAK 324
Score = 158 bits (399), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 92/232 (39%), Positives = 133/232 (57%), Gaps = 16/232 (6%)
Query: 77 TERALDTMNFDALKGRPIRI----MWSQRDPSL--RKSGVGNVFIKNLDKSIDNKAMYDT 130
ERA++ MN L R + + +R+ L R NV+IKN + +D++ + +
Sbjct: 151 AERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKEL 210
Query: 131 FSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRK 190
F FG LS KV DE G SKG+GFV FE E A K+++++NG LN K ++VG+ +
Sbjct: 211 FGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKV 270
Query: 191 EREKELGEKAKLF----------TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDG 240
ER+ EL K + N+Y+KN + +DE+L++ F P+GTITS +VM G
Sbjct: 271 ERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGG 330
Query: 241 KSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRF 292
+S+GFGFV + SPE A KAV NG+ V K LYV AQ+K ER L ++
Sbjct: 331 RSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAHLTNQY 382
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 126/236 (53%), Gaps = 17/236 (7%)
Query: 102 DPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFET 160
+PS + ++++ +L + +Y+ FS G ILS +V +D S GY +V+F+
Sbjct: 2 NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 161 EEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKL 220
A ++++ +N ++ K V + +R+ L + N++IKN + +++ L
Sbjct: 62 PADAERALDTMNFDVIKGKPVRIM----WSQRDPSLRKSG--VGNIFIKNLDKSIDNKAL 115
Query: 221 KEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
+ F +G I S +V+ ++ S+G+GFV +E+ E AE+A++ NG ++ + ++VGR +
Sbjct: 116 YDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKS 175
Query: 281 KAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ ER EL R + N+Y+KN + +DDERL++ F FG S K
Sbjct: 176 RKEREAELGARAKEF----------TNVYIKNFGEDMDDERLKELFGKFGPALSVK 221
>gi|335291035|ref|XP_003127861.2| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Sus scrofa]
Length = 644
Score = 403 bits (1036), Expect = e-110, Method: Compositional matrix adjust.
Identities = 198/275 (72%), Positives = 229/275 (83%), Gaps = 4/275 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD +KG+PIRIMWSQRDPSLRKSGVGNVFIKNLDKSI
Sbjct: 53 GYAYVNFQQP--ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFSAFG+ILSCKV DE G SKGY FVHFET+EAA+K+IEK+NGMLLN + VF
Sbjct: 111 DNKALYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVF 169
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGK 241
VG+F RKERE ELG KAK FTNVYIKNFGE+ +DE LKE+F +G S +VM + GK
Sbjct: 170 VGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDENLKELFSQFGKTLSVKVMRDPSGK 229
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
S+GFGFV+YE E A KAV+ NGKE+ GK+++VGRAQKK ER ELKR+FE LK ER++
Sbjct: 230 SKGFGFVSYEKHEDANKAVEEMNGKEISGKVIFVGRAQKKVERQAELKRKFEQLKQERIS 289
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLY+KNLDD+IDDE+LRKEF+PFG+ITSAK
Sbjct: 290 RYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAK 324
Score = 163 bits (413), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 84/191 (43%), Positives = 121/191 (63%), Gaps = 10/191 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV+IKN + +D++ + + FS FG LS KV +D G SKG+GFV +E E ANK++E++
Sbjct: 192 NVYIKNFGEEVDDENLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEM 251
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKLK 221
NG ++ K++FVG+ + ER+ EL K + N+YIKN + +DEKL+
Sbjct: 252 NGKEISGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLR 311
Query: 222 EMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKK 281
+ F P+G+ITS +VM DG+S+GFGFV + SPE A KAV NG+ V K LYV AQ+K
Sbjct: 312 KEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRK 371
Query: 282 AERTQELKRRF 292
ER L ++
Sbjct: 372 EERKAHLTNQY 382
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 122/228 (53%), Gaps = 17/228 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + +Y+ FS G +LS +V +D S GY +V+F+ A +++
Sbjct: 10 MASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERAL 69
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N ++ K + I +R+ L + NV+IKN + +++ L + F +G
Sbjct: 70 DTMNFDVIKGKPI----RIMWSQRDPSLRKSG--VGNVFIKNLDKSIDNKALYDTFSAFG 123
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S +V+ ++ S+G+ FV +E+ E A+KA++ NG ++ + ++VGR + + ER EL
Sbjct: 124 NILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAEL 183
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ + N+Y+KN + +DDE L++ F+ FG S K
Sbjct: 184 GAKAKEF----------TNVYIKNFGEEVDDENLKELFSQFGKTLSVK 221
>gi|355745175|gb|EHH49800.1| hypothetical protein EGM_00521 [Macaca fascicularis]
Length = 635
Score = 403 bits (1036), Expect = e-110, Method: Compositional matrix adjust.
Identities = 199/275 (72%), Positives = 229/275 (83%), Gaps = 4/275 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD +KG+PIRIMWSQRDPSLRKSGVGNVFIKNLDKSI
Sbjct: 28 GYAYVNFQQP--ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 85
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFSAFG+ILSCKV DE G SKGY FVHFET+EAA+K+IEK+NGMLLN + VF
Sbjct: 86 DNKALYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVF 144
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGK 241
VG+F RKERE ELG KAK FTNVYIKNFGE+ +DE LKE+F +G S +VM + GK
Sbjct: 145 VGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGK 204
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
S+GFGFV+YE E A KAV+ NGKE+ GKI++VGRAQKK ER ELKR+FE LK ER++
Sbjct: 205 SKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERIS 264
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLY+KNLDD+IDDE+LRKEF+PFG+ITSAK
Sbjct: 265 RYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAK 299
Score = 165 bits (417), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 85/191 (44%), Positives = 122/191 (63%), Gaps = 10/191 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV+IKN + +D++++ + FS FG LS KV +D G SKG+GFV +E E ANK++E++
Sbjct: 167 NVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEM 226
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKLK 221
NG ++ KI+FVG+ + ER+ EL K + N+YIKN + +DEKL+
Sbjct: 227 NGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLR 286
Query: 222 EMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKK 281
+ F P+G+ITS +VM DG+S+GFGFV + SPE A KAV NG+ V K LYV AQ+K
Sbjct: 287 KEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRK 346
Query: 282 AERTQELKRRF 292
ER L ++
Sbjct: 347 EERKAHLTNQY 357
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 114/211 (54%), Gaps = 17/211 (8%)
Query: 127 MYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGK 185
+Y+ FS G +LS +V +D S GY +V+F+ A ++++ +N ++ K +
Sbjct: 2 LYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPI---- 57
Query: 186 FIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDGKSRGF 245
I +R+ L + NV+IKN + +++ L + F +G I S +V+ ++ S+G+
Sbjct: 58 RIMWSQRDPSLRKSG--VGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGY 115
Query: 246 GFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQG 305
FV +E+ E A+KA++ NG ++ + ++VGR + + ER EL + +
Sbjct: 116 AFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEF---------- 165
Query: 306 VNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
N+Y+KN + +DDE L++ F+ FG S K
Sbjct: 166 TNVYIKNFGEEVDDESLKELFSQFGKTLSVK 196
>gi|74212334|dbj|BAE30919.1| unnamed protein product [Mus musculus]
Length = 636
Score = 403 bits (1036), Expect = e-110, Method: Compositional matrix adjust.
Identities = 197/275 (71%), Positives = 229/275 (83%), Gaps = 4/275 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD +KG+P+RIMWSQRDPSLRKSGVGN+FIKNLDKSI
Sbjct: 53 GYAYVNFQQP--ADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFSAFG+ILSCKV DE G SKGYGFVHFET+EAA ++IEK+NGMLLN + VF
Sbjct: 111 DNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVF 169
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDG-K 241
VG+F RKERE ELG +AK FTNVYIKNFGED +DE+LKE+F +G S +VM ++G K
Sbjct: 170 VGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDEGGK 229
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
S+GFGFV++E E A+KAV NGKE++GK +YVGRAQKK ER ELKR+FE +K +R+
Sbjct: 230 SKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRIT 289
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLYVKNLDD IDDERLRKEF+PFGTITSAK
Sbjct: 290 RYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAK 324
Score = 157 bits (396), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 92/232 (39%), Positives = 133/232 (57%), Gaps = 16/232 (6%)
Query: 77 TERALDTMNFDALKGRPIRI----MWSQRDPSL--RKSGVGNVFIKNLDKSIDNKAMYDT 130
ERA++ MN L R + + +R+ L R NV+IKN + +D++ + +
Sbjct: 151 AERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKEL 210
Query: 131 FSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRK 190
F FG LS KV DE G SKG+GFV FE E A K+++++NG LN K ++VG+ +
Sbjct: 211 FGKFGPALSVKVMTDEGGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKV 270
Query: 191 EREKELGEKAKLF----------TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDG 240
ER+ EL K + N+Y+KN + +DE+L++ F P+GTITS +VM G
Sbjct: 271 ERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGG 330
Query: 241 KSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRF 292
+S+GFGFV + SPE A KAV NG+ V K LYV AQ+K ER L ++
Sbjct: 331 RSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAHLTNQY 382
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 126/236 (53%), Gaps = 17/236 (7%)
Query: 102 DPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFET 160
+PS + ++++ +L + +Y+ FS G ILS +V +D S GY +V+F+
Sbjct: 2 NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 161 EEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKL 220
A ++++ +N ++ K V + +R+ L + N++IKN + +++ L
Sbjct: 62 PADAERALDTMNFDVIKGKPVRIM----WSQRDPSLRKSG--VGNIFIKNLDKSIDNKAL 115
Query: 221 KEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
+ F +G I S +V+ ++ S+G+GFV +E+ E AE+A++ NG ++ + ++VGR +
Sbjct: 116 YDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKS 175
Query: 281 KAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ ER EL R + N+Y+KN + +DDERL++ F FG S K
Sbjct: 176 RKEREAELGARAKEF----------TNVYIKNFGEDMDDERLKELFGKFGPALSVK 221
>gi|19705459|ref|NP_599180.1| polyadenylate-binding protein 1 [Rattus norvegicus]
gi|47605941|sp|Q9EPH8.1|PABP1_RAT RecName: Full=Polyadenylate-binding protein 1; Short=PABP-1;
Short=Poly(A)-binding protein 1
gi|12188891|emb|CAC21554.1| poly(A) binding protein [Rattus norvegicus]
gi|52789215|gb|AAH83176.1| Poly(A) binding protein, cytoplasmic 1 [Rattus norvegicus]
gi|149066519|gb|EDM16392.1| rCG60104 [Rattus norvegicus]
Length = 636
Score = 403 bits (1036), Expect = e-110, Method: Compositional matrix adjust.
Identities = 197/275 (71%), Positives = 229/275 (83%), Gaps = 4/275 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD +KG+P+RIMWSQRDPSLRKSGVGN+FIKNLDKSI
Sbjct: 53 GYAYVNFQQP--ADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFSAFG+ILSCKV DE G SKGYGFVHFET+EAA ++IEK+NGMLLN + VF
Sbjct: 111 DNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVF 169
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GK 241
VG+F RKERE ELG +AK FTNVYIKNFGED +DE+LKE+F +G S +VM ++ GK
Sbjct: 170 VGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGK 229
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
S+GFGFV++E E A+KAV NGKE++GK +YVGRAQKK ER ELKR+FE +K +R+
Sbjct: 230 SKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRIT 289
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLYVKNLDD IDDERLRKEF+PFGTITSAK
Sbjct: 290 RYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAK 324
Score = 157 bits (398), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 92/232 (39%), Positives = 133/232 (57%), Gaps = 16/232 (6%)
Query: 77 TERALDTMNFDALKGRPIRI----MWSQRDPSL--RKSGVGNVFIKNLDKSIDNKAMYDT 130
ERA++ MN L R + + +R+ L R NV+IKN + +D++ + +
Sbjct: 151 AERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKEL 210
Query: 131 FSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRK 190
F FG LS KV DE G SKG+GFV FE E A K+++++NG LN K ++VG+ +
Sbjct: 211 FGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKV 270
Query: 191 EREKELGEKAKLF----------TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDG 240
ER+ EL K + N+Y+KN + +DE+L++ F P+GTITS +VM G
Sbjct: 271 ERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGG 330
Query: 241 KSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRF 292
+S+GFGFV + SPE A KAV NG+ V K LYV AQ+K ER L ++
Sbjct: 331 RSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAHLTNQY 382
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 126/236 (53%), Gaps = 17/236 (7%)
Query: 102 DPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFET 160
+PS + ++++ +L + +Y+ FS G ILS +V +D S GY +V+F+
Sbjct: 2 NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 161 EEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKL 220
A ++++ +N ++ K V + +R+ L + N++IKN + +++ L
Sbjct: 62 PADAERALDTMNFDVIKGKPVRIM----WSQRDPSLRKSG--VGNIFIKNLDKSIDNKAL 115
Query: 221 KEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
+ F +G I S +V+ ++ S+G+GFV +E+ E AE+A++ NG ++ + ++VGR +
Sbjct: 116 YDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKS 175
Query: 281 KAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ ER EL R + N+Y+KN + +DDERL++ F FG S K
Sbjct: 176 RKEREAELGARAKEF----------TNVYIKNFGEDMDDERLKELFGKFGPALSVK 221
>gi|73976763|ref|XP_857000.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Canis lupus
familiaris]
Length = 644
Score = 403 bits (1036), Expect = e-110, Method: Compositional matrix adjust.
Identities = 198/275 (72%), Positives = 229/275 (83%), Gaps = 4/275 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD +KG+PIRIMWSQRDPSLRKSGVGNVFIKNLDKSI
Sbjct: 53 GYAYVNFQQP--ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFSAFG+ILSCKV DE G SKGY FVHFET+EAA+K+IEK+NGMLLN + VF
Sbjct: 111 DNKALYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVF 169
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGK 241
VG+F RKERE ELG KAK FTNVYIKNFGE+ +DE LKE+F +G S +VM + GK
Sbjct: 170 VGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGK 229
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
S+GFGFV+YE E A KAV+ NGKE+ GK+++VGRAQKK ER ELKR+FE LK ER++
Sbjct: 230 SKGFGFVSYEKHEDANKAVEEMNGKEISGKVIFVGRAQKKVERQAELKRKFEQLKQERIS 289
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLY+KNLDD+IDDE+LRKEF+PFG+ITSAK
Sbjct: 290 RYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAK 324
Score = 164 bits (416), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 84/191 (43%), Positives = 122/191 (63%), Gaps = 10/191 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV+IKN + +D++++ + FS FG LS KV +D G SKG+GFV +E E ANK++E++
Sbjct: 192 NVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEM 251
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKLK 221
NG ++ K++FVG+ + ER+ EL K + N+YIKN + +DEKL+
Sbjct: 252 NGKEISGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLR 311
Query: 222 EMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKK 281
+ F P+G+ITS +VM DG+S+GFGFV + SPE A KAV NG+ V K LYV AQ+K
Sbjct: 312 KEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRK 371
Query: 282 AERTQELKRRF 292
ER L ++
Sbjct: 372 EERKAHLTNQY 382
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 122/228 (53%), Gaps = 17/228 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + +Y+ FS G +LS +V +D S GY +V+F+ A +++
Sbjct: 10 MASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERAL 69
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N ++ K + I +R+ L + NV+IKN + +++ L + F +G
Sbjct: 70 DTMNFDVIKGKPI----RIMWSQRDPSLRKSG--VGNVFIKNLDKSIDNKALYDTFSAFG 123
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S +V+ ++ S+G+ FV +E+ E A+KA++ NG ++ + ++VGR + + ER EL
Sbjct: 124 NILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAEL 183
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ + N+Y+KN + +DDE L++ F+ FG S K
Sbjct: 184 GAKAKEF----------TNVYIKNFGEEVDDESLKELFSQFGKTLSVK 221
>gi|426215230|ref|XP_004001877.1| PREDICTED: polyadenylate-binding protein 4 isoform 3 [Ovis aries]
Length = 631
Score = 403 bits (1036), Expect = e-110, Method: Compositional matrix adjust.
Identities = 198/275 (72%), Positives = 229/275 (83%), Gaps = 4/275 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD +KG+PIRIMWSQRDPSLRKSGVGNVFIKNLDKSI
Sbjct: 53 GYAYVNFQQP--ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFSAFG+ILSCKV DE G SKGY FVHFET+EAA+K+IEK+NGMLLN + VF
Sbjct: 111 DNKALYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVF 169
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGK 241
VG+F RKERE ELG KAK FTNVYIKNFGE+ +DE LKE+F +G S +VM + GK
Sbjct: 170 VGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDENLKELFSQFGKTLSVKVMRDPSGK 229
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
S+GFGFV+YE E A KAV+ NGKE+ GK+++VGRAQKK ER ELKR+FE LK ER++
Sbjct: 230 SKGFGFVSYEKHEDANKAVEEMNGKEITGKVIFVGRAQKKVERQAELKRKFEQLKQERIS 289
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLY+KNLDD+IDDE+LRKEF+PFG+ITSAK
Sbjct: 290 RYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAK 324
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 84/191 (43%), Positives = 120/191 (62%), Gaps = 10/191 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV+IKN + +D++ + + FS FG LS KV +D G SKG+GFV +E E ANK++E++
Sbjct: 192 NVYIKNFGEEVDDENLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEM 251
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKLK 221
NG + K++FVG+ + ER+ EL K + N+YIKN + +DEKL+
Sbjct: 252 NGKEITGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLR 311
Query: 222 EMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKK 281
+ F P+G+ITS +VM DG+S+GFGFV + SPE A KAV NG+ V K LYV AQ+K
Sbjct: 312 KEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRK 371
Query: 282 AERTQELKRRF 292
ER L ++
Sbjct: 372 EERKAHLTNQY 382
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 122/228 (53%), Gaps = 17/228 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + +Y+ FS G +LS +V +D S GY +V+F+ A +++
Sbjct: 10 MASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERAL 69
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N ++ K + I +R+ L + NV+IKN + +++ L + F +G
Sbjct: 70 DTMNFDVIKGKPI----RIMWSQRDPSLRKSG--VGNVFIKNLDKSIDNKALYDTFSAFG 123
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S +V+ ++ S+G+ FV +E+ E A+KA++ NG ++ + ++VGR + + ER EL
Sbjct: 124 NILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAEL 183
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ + N+Y+KN + +DDE L++ F+ FG S K
Sbjct: 184 GAKAKEF----------TNVYIKNFGEEVDDENLKELFSQFGKTLSVK 221
>gi|289742137|gb|ADD19816.1| polyA-binding protein [Glossina morsitans morsitans]
Length = 653
Score = 403 bits (1036), Expect = e-110, Method: Compositional matrix adjust.
Identities = 210/276 (76%), Positives = 237/276 (85%), Gaps = 4/276 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD L+ +PIRIMWSQRDPSLR+SG+GNVFIKNLDK+I
Sbjct: 44 GYAYVNFQQP--ADAERALDTMNFDLLRNKPIRIMWSQRDPSLRRSGIGNVFIKNLDKTI 101
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFSAFG+ILSCKVA D++G SKGYGFVHFETEEAAN +IEKVNGMLLN K V+
Sbjct: 102 DNKAIYDTFSAFGNILSCKVATDDKGTSKGYGFVHFETEEAANNAIEKVNGMLLNGKKVY 161
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGK 241
VGKFIPRKEREK+LGEKAKLFTNVY+KNFG+D +DEKLKEMF+PYG ITSY+VM DGK
Sbjct: 162 VGKFIPRKEREKDLGEKAKLFTNVYVKNFGDDVDDEKLKEMFDPYGKITSYKVMIKEDGK 221
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEV-DGKILYVGRAQKKAERTQELKRRFEMLKIERL 300
S+ FGFVA+E+ E AE AV+A NGK++ DGK LYV RAQKKAER QELKR+FE LK +R
Sbjct: 222 SKCFGFVAFETTEAAEAAVEALNGKDMGDGKALYVARAQKKAERQQELKRKFEELKKKRQ 281
Query: 301 NRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
GVNLYVKNLDD+IDDERLRKEF+ FGTITSAK
Sbjct: 282 ESVYGVNLYVKNLDDTIDDERLRKEFSLFGTITSAK 317
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 128/229 (55%), Gaps = 18/229 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + I+ +++ FS G +LS +V +D S GY +V+F+ A +++
Sbjct: 1 MASLYVGDLHQDINEAGLFEKFSNAGPVLSIRVCRDVITRRSLGYAYVNFQQPADAERAL 60
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N LL +K + I +R+ L NV+IKN + +++ + + F +G
Sbjct: 61 DTMNFDLLRNKPI----RIMWSQRDPSLRRSG--IGNVFIKNLDKTIDNKAIYDTFSAFG 114
Query: 229 TITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQE 287
I S +V +D G S+G+GFV +E+ E A A++ NG ++GK +YVG+ + ER ++
Sbjct: 115 NILSCKVATDDKGTSKGYGFVHFETEEAANNAIEKVNGMLLNGKKVYVGKFIPRKEREKD 174
Query: 288 LKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
L + ++ N+YVKN D +DDE+L++ F P+G ITS K
Sbjct: 175 LGEKAKLF----------TNVYVKNFGDDVDDEKLKEMFDPYGKITSYK 213
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/193 (37%), Positives = 113/193 (58%), Gaps = 12/193 (6%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV++KN +D++ + + F +G I S KV E G SK +GFV FET EAA ++E +
Sbjct: 184 NVYVKNFGDDVDDEKLKEMFDPYGKITSYKVMIKEDGKSKCFGFVAFETTEAAEAAVEAL 243
Query: 172 NGM-LLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKL 220
NG + + K ++V + + ER++EL K + N+Y+KN + +DE+L
Sbjct: 244 NGKDMGDGKALYVARAQKKAERQQELKRKFEELKKKRQESVYGVNLYVKNLDDTIDDERL 303
Query: 221 KEMFEPYGTITSYRVMNN-DGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQ 279
++ F +GTITS +VM + DG+S+GFGFV + +P A AV NG+ V K LYV AQ
Sbjct: 304 RKEFSLFGTITSAKVMTDEDGRSKGFGFVCFVAPHEATCAVTEMNGRVVGSKPLYVALAQ 363
Query: 280 KKAERTQELKRRF 292
+K +R L ++
Sbjct: 364 RKEDRKAHLASQY 376
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 67/115 (58%), Gaps = 8/115 (6%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
N+++KNLD +ID++ + FS FG+I S KV DE G SKG+GFV F A ++ ++
Sbjct: 288 NLYVKNLDDTIDDERLRKEFSLFGTITSAKVMTDEDGRSKGFGFVCFVAPHEATCAVTEM 347
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEP 226
NG ++ SK ++V +++R+ L + Y+++ +++ +MF+P
Sbjct: 348 NGRVVGSKPLYVALAQRKEDRKAHLASQ-------YMRHMA-GMRMQQIGQMFQP 394
>gi|431922543|gb|ELK19486.1| Polyadenylate-binding protein 4 [Pteropus alecto]
Length = 720
Score = 403 bits (1036), Expect = e-110, Method: Compositional matrix adjust.
Identities = 198/275 (72%), Positives = 230/275 (83%), Gaps = 4/275 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD +KG+PIRIMWSQRDPSLRKSGVGNVFIKNLDKSI
Sbjct: 53 GYAYVNFQQPA--DAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFSAFG+ILSCKV DE G SKGY FVHFET+EAA+K+IEK+NGMLLN + VF
Sbjct: 111 DNKALYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVF 169
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGK 241
VG+F RKERE ELG KAK FTNVYIKNFGE+ +DE LKE+F +G S +VM + GK
Sbjct: 170 VGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGK 229
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
S+GFGFV+YE E A KAV+ NGKE++GK+++VGRAQKK ER ELKR+FE LK ER++
Sbjct: 230 SKGFGFVSYEKHEDANKAVEEMNGKEINGKVIFVGRAQKKVERQAELKRKFEQLKQERIS 289
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLY+KNLDD+IDDE+LRKEF+PFG+ITSAK
Sbjct: 290 RYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAK 324
Score = 167 bits (422), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 85/191 (44%), Positives = 122/191 (63%), Gaps = 10/191 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV+IKN + +D++++ + FS FG LS KV +D G SKG+GFV +E E ANK++E++
Sbjct: 192 NVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEM 251
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKLK 221
NG +N K++FVG+ + ER+ EL K + N+YIKN + +DEKL+
Sbjct: 252 NGKEINGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLR 311
Query: 222 EMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKK 281
+ F P+G+ITS +VM DG+S+GFGFV + SPE A KAV NG+ V K LYV AQ+K
Sbjct: 312 KEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRK 371
Query: 282 AERTQELKRRF 292
ER L ++
Sbjct: 372 EERKAHLTNQY 382
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 123/228 (53%), Gaps = 17/228 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + +Y+ FS G +LS +V +D S GY +V+F+ A +++
Sbjct: 10 MASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERAL 69
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N ++ K + I +R+ L + NV+IKN + +++ L + F +G
Sbjct: 70 DTMNFDVIKGKPI----RIMWSQRDPSLRKSG--VGNVFIKNLDKSIDNKALYDTFSAFG 123
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S +V+ ++ S+G+ FV +E+ E A+KA++ NG ++ + ++VGR + + ER EL
Sbjct: 124 NILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAEL 183
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ + + N+Y+KN + +DDE L++ F+ FG S K
Sbjct: 184 GAKAK----------EFTNVYIKNFGEEVDDESLKELFSQFGKTLSVK 221
>gi|301790633|ref|XP_002930398.1| PREDICTED: polyadenylate-binding protein 4-like [Ailuropoda
melanoleuca]
Length = 644
Score = 403 bits (1036), Expect = e-110, Method: Compositional matrix adjust.
Identities = 198/275 (72%), Positives = 229/275 (83%), Gaps = 4/275 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD +KG+PIRIMWSQRDPSLRKSGVGNVFIKNLDKSI
Sbjct: 53 GYAYVNFQQP--ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFSAFG+ILSCKV DE G SKGY FVHFET+EAA+K+IEK+NGMLLN + VF
Sbjct: 111 DNKALYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVF 169
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGK 241
VG+F RKERE ELG KAK FTNVYIKNFGE+ +DE LKE+F +G S +VM + GK
Sbjct: 170 VGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGK 229
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
S+GFGFV+YE E A KAV+ NGKE+ GK+++VGRAQKK ER ELKR+FE LK ER++
Sbjct: 230 SKGFGFVSYEKHEDANKAVEEMNGKEISGKVIFVGRAQKKVERQAELKRKFEQLKQERIS 289
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLY+KNLDD+IDDE+LRKEF+PFG+ITSAK
Sbjct: 290 RYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAK 324
Score = 164 bits (416), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 84/191 (43%), Positives = 122/191 (63%), Gaps = 10/191 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV+IKN + +D++++ + FS FG LS KV +D G SKG+GFV +E E ANK++E++
Sbjct: 192 NVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEM 251
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKLK 221
NG ++ K++FVG+ + ER+ EL K + N+YIKN + +DEKL+
Sbjct: 252 NGKEISGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLR 311
Query: 222 EMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKK 281
+ F P+G+ITS +VM DG+S+GFGFV + SPE A KAV NG+ V K LYV AQ+K
Sbjct: 312 KEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRK 371
Query: 282 AERTQELKRRF 292
ER L ++
Sbjct: 372 EERKAHLTNQY 382
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 121/228 (53%), Gaps = 17/228 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + +Y+ FS G +LS V +D S GY +V+F+ A +++
Sbjct: 10 MASLYVGDLHSDVTEAMLYEKFSPAGPVLSIWVCRDMITRRSLGYAYVNFQQPADAERAL 69
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N ++ K + I +R+ L + NV+IKN + +++ L + F +G
Sbjct: 70 DTMNFDVIKGKPI----RIMWSQRDPSLRKSG--VGNVFIKNLDKSIDNKALYDTFSAFG 123
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S +V+ ++ S+G+ FV +E+ E A+KA++ NG ++ + ++VGR + + ER EL
Sbjct: 124 NILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAEL 183
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ + N+Y+KN + +DDE L++ F+ FG S K
Sbjct: 184 GAKAKEF----------TNVYIKNFGEEVDDESLKELFSQFGKTLSVK 221
>gi|426215226|ref|XP_004001875.1| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Ovis aries]
Length = 660
Score = 403 bits (1036), Expect = e-110, Method: Compositional matrix adjust.
Identities = 198/275 (72%), Positives = 229/275 (83%), Gaps = 4/275 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD +KG+PIRIMWSQRDPSLRKSGVGNVFIKNLDKSI
Sbjct: 53 GYAYVNFQQP--ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFSAFG+ILSCKV DE G SKGY FVHFET+EAA+K+IEK+NGMLLN + VF
Sbjct: 111 DNKALYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVF 169
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGK 241
VG+F RKERE ELG KAK FTNVYIKNFGE+ +DE LKE+F +G S +VM + GK
Sbjct: 170 VGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDENLKELFSQFGKTLSVKVMRDPSGK 229
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
S+GFGFV+YE E A KAV+ NGKE+ GK+++VGRAQKK ER ELKR+FE LK ER++
Sbjct: 230 SKGFGFVSYEKHEDANKAVEEMNGKEITGKVIFVGRAQKKVERQAELKRKFEQLKQERIS 289
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLY+KNLDD+IDDE+LRKEF+PFG+ITSAK
Sbjct: 290 RYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAK 324
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 84/191 (43%), Positives = 120/191 (62%), Gaps = 10/191 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV+IKN + +D++ + + FS FG LS KV +D G SKG+GFV +E E ANK++E++
Sbjct: 192 NVYIKNFGEEVDDENLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEM 251
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKLK 221
NG + K++FVG+ + ER+ EL K + N+YIKN + +DEKL+
Sbjct: 252 NGKEITGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLR 311
Query: 222 EMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKK 281
+ F P+G+ITS +VM DG+S+GFGFV + SPE A KAV NG+ V K LYV AQ+K
Sbjct: 312 KEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRK 371
Query: 282 AERTQELKRRF 292
ER L ++
Sbjct: 372 EERKAHLTNQY 382
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 122/228 (53%), Gaps = 17/228 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + +Y+ FS G +LS +V +D S GY +V+F+ A +++
Sbjct: 10 MASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERAL 69
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N ++ K + I +R+ L + NV+IKN + +++ L + F +G
Sbjct: 70 DTMNFDVIKGKPI----RIMWSQRDPSLRKSG--VGNVFIKNLDKSIDNKALYDTFSAFG 123
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S +V+ ++ S+G+ FV +E+ E A+KA++ NG ++ + ++VGR + + ER EL
Sbjct: 124 NILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAEL 183
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ + N+Y+KN + +DDE L++ F+ FG S K
Sbjct: 184 GAKAKEF----------TNVYIKNFGEEVDDENLKELFSQFGKTLSVK 221
>gi|426215228|ref|XP_004001876.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Ovis aries]
Length = 644
Score = 403 bits (1035), Expect = e-110, Method: Compositional matrix adjust.
Identities = 198/275 (72%), Positives = 229/275 (83%), Gaps = 4/275 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD +KG+PIRIMWSQRDPSLRKSGVGNVFIKNLDKSI
Sbjct: 53 GYAYVNFQQP--ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFSAFG+ILSCKV DE G SKGY FVHFET+EAA+K+IEK+NGMLLN + VF
Sbjct: 111 DNKALYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVF 169
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGK 241
VG+F RKERE ELG KAK FTNVYIKNFGE+ +DE LKE+F +G S +VM + GK
Sbjct: 170 VGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDENLKELFSQFGKTLSVKVMRDPSGK 229
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
S+GFGFV+YE E A KAV+ NGKE+ GK+++VGRAQKK ER ELKR+FE LK ER++
Sbjct: 230 SKGFGFVSYEKHEDANKAVEEMNGKEITGKVIFVGRAQKKVERQAELKRKFEQLKQERIS 289
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLY+KNLDD+IDDE+LRKEF+PFG+ITSAK
Sbjct: 290 RYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAK 324
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 84/191 (43%), Positives = 120/191 (62%), Gaps = 10/191 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV+IKN + +D++ + + FS FG LS KV +D G SKG+GFV +E E ANK++E++
Sbjct: 192 NVYIKNFGEEVDDENLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEM 251
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKLK 221
NG + K++FVG+ + ER+ EL K + N+YIKN + +DEKL+
Sbjct: 252 NGKEITGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLR 311
Query: 222 EMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKK 281
+ F P+G+ITS +VM DG+S+GFGFV + SPE A KAV NG+ V K LYV AQ+K
Sbjct: 312 KEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRK 371
Query: 282 AERTQELKRRF 292
ER L ++
Sbjct: 372 EERKAHLTNQY 382
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 122/228 (53%), Gaps = 17/228 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + +Y+ FS G +LS +V +D S GY +V+F+ A +++
Sbjct: 10 MASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERAL 69
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N ++ K + I +R+ L + NV+IKN + +++ L + F +G
Sbjct: 70 DTMNFDVIKGKPI----RIMWSQRDPSLRKSG--VGNVFIKNLDKSIDNKALYDTFSAFG 123
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S +V+ ++ S+G+ FV +E+ E A+KA++ NG ++ + ++VGR + + ER EL
Sbjct: 124 NILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAEL 183
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ + N+Y+KN + +DDE L++ F+ FG S K
Sbjct: 184 GAKAKEF----------TNVYIKNFGEEVDDENLKELFSQFGKTLSVK 221
>gi|224046575|ref|XP_002200268.1| PREDICTED: polyadenylate-binding protein 1 [Taeniopygia guttata]
Length = 637
Score = 403 bits (1035), Expect = e-110, Method: Compositional matrix adjust.
Identities = 197/275 (71%), Positives = 229/275 (83%), Gaps = 4/275 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD +KG+P+RIMWSQRDPSLRKSGVGN+FIKNLDKSI
Sbjct: 53 GYAYVNFQQP--ADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFSAFG+ILSCKV DE G SKGYGFVHFET+EAA ++IEK+NGMLLN + VF
Sbjct: 111 DNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVF 169
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GK 241
VG+F RKERE ELG +AK FTNVYIKNFGED +DE+LKE+F +G S +VM ++ GK
Sbjct: 170 VGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGK 229
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
S+GFGFV++E E A+KAV NGKE++GK +YVGRAQKK ER ELKR+FE +K +R+
Sbjct: 230 SKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRIT 289
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLYVKNLDD IDDERLRKEF+PFGTITSAK
Sbjct: 290 RYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAK 324
Score = 157 bits (398), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 92/232 (39%), Positives = 133/232 (57%), Gaps = 16/232 (6%)
Query: 77 TERALDTMNFDALKGRPIRI----MWSQRDPSL--RKSGVGNVFIKNLDKSIDNKAMYDT 130
ERA++ MN L R + + +R+ L R NV+IKN + +D++ + +
Sbjct: 151 AERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKEL 210
Query: 131 FSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRK 190
F FG LS KV DE G SKG+GFV FE E A K+++++NG LN K ++VG+ +
Sbjct: 211 FGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKV 270
Query: 191 EREKELGEKAKLF----------TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDG 240
ER+ EL K + N+Y+KN + +DE+L++ F P+GTITS +VM G
Sbjct: 271 ERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGG 330
Query: 241 KSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRF 292
+S+GFGFV + SPE A KAV NG+ V K LYV AQ+K ER L ++
Sbjct: 331 RSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAHLTNQY 382
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 123/228 (53%), Gaps = 17/228 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + +Y+ FS G ILS +V +D S GY +V+F+ A +++
Sbjct: 10 MASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERAL 69
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N ++ K V I +R+ L + N++IKN + +++ L + F +G
Sbjct: 70 DTMNFDVIKGKPV----RIMWSQRDPSLRKSG--VGNIFIKNLDKSIDNKALYDTFSAFG 123
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S +V+ ++ S+G+GFV +E+ E AE+A++ NG ++ + ++VGR + + ER EL
Sbjct: 124 NILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAEL 183
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
R + N+Y+KN + +DDERL++ F FG S K
Sbjct: 184 GARAKEF----------TNVYIKNFGEDMDDERLKELFGKFGPALSVK 221
>gi|139948570|ref|NP_001077193.1| polyadenylate-binding protein 4 [Bos taurus]
gi|134024563|gb|AAI34510.1| PABPC4 protein [Bos taurus]
gi|296488909|tpg|DAA31022.1| TPA: poly A binding protein, cytoplasmic 4 [Bos taurus]
Length = 645
Score = 403 bits (1035), Expect = e-110, Method: Compositional matrix adjust.
Identities = 198/275 (72%), Positives = 229/275 (83%), Gaps = 4/275 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD +KG+PIRIMWSQRDPSLRKSGVGNVFIKNLDKSI
Sbjct: 53 GYAYVNFQQP--ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFSAFG+ILSCKV DE G SKGY FVHFET+EAA+K+IEK+NGMLLN + VF
Sbjct: 111 DNKALYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVF 169
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGK 241
VG+F RKERE ELG KAK FTNVYIKNFGE+ +DE LKE+F +G S +VM + GK
Sbjct: 170 VGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDENLKELFSQFGKTLSVKVMRDPSGK 229
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
S+GFGFV+YE E A KAV+ NGKE+ GK+++VGRAQKK ER ELKR+FE LK ER++
Sbjct: 230 SKGFGFVSYEKHEDANKAVEEMNGKEITGKVIFVGRAQKKVERQAELKRKFEQLKQERIS 289
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLY+KNLDD+IDDE+LRKEF+PFG+ITSAK
Sbjct: 290 RYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAK 324
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 84/191 (43%), Positives = 120/191 (62%), Gaps = 10/191 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV+IKN + +D++ + + FS FG LS KV +D G SKG+GFV +E E ANK++E++
Sbjct: 192 NVYIKNFGEEVDDENLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEM 251
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKLK 221
NG + K++FVG+ + ER+ EL K + N+YIKN + +DEKL+
Sbjct: 252 NGKEITGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLR 311
Query: 222 EMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKK 281
+ F P+G+ITS +VM DG+S+GFGFV + SPE A KAV NG+ V K LYV AQ+K
Sbjct: 312 KEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRK 371
Query: 282 AERTQELKRRF 292
ER L ++
Sbjct: 372 EERKAHLTNQY 382
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 122/228 (53%), Gaps = 17/228 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + +Y+ FS G +LS +V +D S GY +V+F+ A +++
Sbjct: 10 MASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERAL 69
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N ++ K + I +R+ L + NV+IKN + +++ L + F +G
Sbjct: 70 DTMNFDVIKGKPI----RIMWSQRDPSLRKSG--VGNVFIKNLDKSIDNKALYDTFSAFG 123
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S +V+ ++ S+G+ FV +E+ E A+KA++ NG ++ + ++VGR + + ER EL
Sbjct: 124 NILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAEL 183
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ + N+Y+KN + +DDE L++ F+ FG S K
Sbjct: 184 GAKAKEF----------TNVYIKNFGEEVDDENLKELFSQFGKTLSVK 221
>gi|348588301|ref|XP_003479905.1| PREDICTED: polyadenylate-binding protein 1-like [Cavia porcellus]
Length = 599
Score = 403 bits (1035), Expect = e-110, Method: Compositional matrix adjust.
Identities = 195/288 (67%), Positives = 237/288 (82%), Gaps = 3/288 (1%)
Query: 50 DWDSGYTCHQLGSGAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSG 109
+ +G + + G I++ + ++L ERALDTMNFD +KG+P+RIMWSQRDPSLRKSG
Sbjct: 2 EAPTGASSRRPSLGGIILNF-ENFLLAAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSG 60
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIE 169
VGN+FIKNLDKSIDNKA+YDTFSAFG+ILSCKV DE G SKGYGFVHFET+EAA ++IE
Sbjct: 61 VGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIE 119
Query: 170 KVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGT 229
K+NGMLLN + VFVG+F RKERE ELG +AK FTNVYIKNFGED +DE+LK++F +G
Sbjct: 120 KMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGP 179
Query: 230 ITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
S +VM ++ GKS+GFGFV++E E A+KAV NGKE++GK +YVGRAQKK ER EL
Sbjct: 180 ALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTEL 239
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
KR+FE +K +R+ RYQGVNLYVKNLDD IDDERLRKEF+PFGTITSAK
Sbjct: 240 KRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAK 287
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 93/232 (40%), Positives = 133/232 (57%), Gaps = 16/232 (6%)
Query: 77 TERALDTMNFDALKGRPIRI----MWSQRDPSL--RKSGVGNVFIKNLDKSIDNKAMYDT 130
ERA++ MN L R + + +R+ L R NV+IKN + +D++ + D
Sbjct: 114 AERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDL 173
Query: 131 FSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRK 190
F FG LS KV DE G SKG+GFV FE E A K+++++NG LN K ++VG+ +
Sbjct: 174 FGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKV 233
Query: 191 EREKELGEKAKLF----------TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDG 240
ER+ EL K + N+Y+KN + +DE+L++ F P+GTITS +VM G
Sbjct: 234 ERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGG 293
Query: 241 KSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRF 292
+S+GFGFV + SPE A KAV NG+ V K LYV AQ+K ER L ++
Sbjct: 294 RSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAHLTNQY 345
>gi|41388837|gb|AAH65540.1| PABPC4 protein [Homo sapiens]
Length = 631
Score = 403 bits (1035), Expect = e-110, Method: Compositional matrix adjust.
Identities = 198/275 (72%), Positives = 229/275 (83%), Gaps = 4/275 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD +KG+PIRIMWSQRDPSLRKSGVGNVFIKNLDKSI
Sbjct: 53 GYAYVNFQQP--ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNK +YDTFSAFG+ILSCKV DE G SKGY FVHFET+EAA+K+IEK+NGMLLN + VF
Sbjct: 111 DNKVLYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVF 169
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGK 241
VG+F RKERE ELG KAK FTNVYIKNFGE+ +DE LKE+F +G S +VM + +GK
Sbjct: 170 VGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGK 229
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
S+GFGFV+YE E A KAV+ NGKE+ GKI++VGRAQKK ER ELKR+FE LK ER++
Sbjct: 230 SKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERIS 289
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLY+KNLDD+IDDE+LRKEF+PFG+ITSAK
Sbjct: 290 RYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAK 324
Score = 165 bits (418), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 85/191 (44%), Positives = 122/191 (63%), Gaps = 10/191 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV+IKN + +D++++ + FS FG LS KV +D G SKG+GFV +E E ANK++E++
Sbjct: 192 NVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEM 251
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKLK 221
NG ++ KI+FVG+ + ER+ EL K + N+YIKN + +DEKL+
Sbjct: 252 NGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLR 311
Query: 222 EMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKK 281
+ F P+G+ITS +VM DG+S+GFGFV + SPE A KAV NG+ V K LYV AQ+K
Sbjct: 312 KEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRK 371
Query: 282 AERTQELKRRF 292
ER L ++
Sbjct: 372 EERKAHLTNQY 382
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 122/228 (53%), Gaps = 17/228 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + +Y+ FS G +LS +V +D S GY +V+F+ A +++
Sbjct: 10 MASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERAL 69
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N ++ K + I +R+ L + NV+IKN + +++ L + F +G
Sbjct: 70 DTMNFDVIKGKPI----RIMWSQRDPSLRKSG--VGNVFIKNLDKSIDNKVLYDTFSAFG 123
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S +V+ ++ S+G+ FV +E+ E A+KA++ NG ++ + ++VGR + + ER EL
Sbjct: 124 NILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAEL 183
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ + N+Y+KN + +DDE L++ F+ FG S K
Sbjct: 184 GAKAKEF----------TNVYIKNFGEEVDDESLKELFSQFGKTLSVK 221
>gi|118101731|ref|XP_417821.2| PREDICTED: polyadenylate-binding protein 4 [Gallus gallus]
Length = 630
Score = 403 bits (1035), Expect = e-110, Method: Compositional matrix adjust.
Identities = 196/275 (71%), Positives = 231/275 (84%), Gaps = 4/275 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD +KG+PIRIMWSQRDPSLRKSGVGNVFIKNLDKSI
Sbjct: 53 GYAYVNFQQP--ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFSAFG+ILSCKV DE G SKGY FVHFET++AA+++IEK+NGMLLN + VF
Sbjct: 111 DNKALYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQDAADRAIEKMNGMLLNDRKVF 169
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GK 241
VG+F RKERE ELG KAK FTNVYIKNFG+D +DE+LKE+F YG S +VM + GK
Sbjct: 170 VGRFKSRKEREAELGAKAKEFTNVYIKNFGDDMDDERLKELFSKYGKTLSVKVMTDPTGK 229
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
S+GFGFV++E E A KAV+ NGK+++GK+++VGRAQKK ER ELKRRFE LK ER++
Sbjct: 230 SKGFGFVSFEKHEDANKAVEEMNGKDINGKMVFVGRAQKKVERQAELKRRFEQLKQERIS 289
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLY+KNLDD+IDDE+LRKEF+PFG+ITSAK
Sbjct: 290 RYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAK 324
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 85/191 (44%), Positives = 119/191 (62%), Gaps = 10/191 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV+IKN +D++ + + FS +G LS KV D G SKG+GFV FE E ANK++E++
Sbjct: 192 NVYIKNFGDDMDDERLKELFSKYGKTLSVKVMTDPTGKSKGFGFVSFEKHEDANKAVEEM 251
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKLK 221
NG +N K+VFVG+ + ER+ EL + + N+YIKN + +DEKL+
Sbjct: 252 NGKDINGKMVFVGRAQKKVERQAELKRRFEQLKQERISRYQGVNLYIKNLDDTIDDEKLR 311
Query: 222 EMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKK 281
+ F P+G+ITS +VM DG+S+GFGFV + SPE A KAV NG+ V K LYV AQ+K
Sbjct: 312 KEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRK 371
Query: 282 AERTQELKRRF 292
ER L ++
Sbjct: 372 EERKAHLTNQY 382
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 123/228 (53%), Gaps = 17/228 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + +Y+ FS G +LS +V +D S GY +V+F+ A +++
Sbjct: 10 MASLYVGDLHPDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERAL 69
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N ++ K + I +R+ L + NV+IKN + +++ L + F +G
Sbjct: 70 DTMNFDVIKGKPI----RIMWSQRDPSLRKSG--VGNVFIKNLDKSIDNKALYDTFSAFG 123
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S +V+ ++ S+G+ FV +E+ + A++A++ NG ++ + ++VGR + + ER EL
Sbjct: 124 NILSCKVVCDENGSKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSRKEREAEL 183
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ + N+Y+KN D +DDERL++ F+ +G S K
Sbjct: 184 GAKAKEF----------TNVYIKNFGDDMDDERLKELFSKYGKTLSVK 221
>gi|207080212|ref|NP_001128842.1| polyadenylate-binding protein 1 [Pongo abelii]
gi|75070631|sp|Q5R8F7.1|PABP1_PONAB RecName: Full=Polyadenylate-binding protein 1; Short=PABP-1;
Short=Poly(A)-binding protein 1
gi|55730462|emb|CAH91953.1| hypothetical protein [Pongo abelii]
Length = 636
Score = 403 bits (1035), Expect = e-110, Method: Compositional matrix adjust.
Identities = 196/275 (71%), Positives = 229/275 (83%), Gaps = 4/275 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD +KG+P+RIMWSQRDPSLRKSGVGN+FIKNLDKSI
Sbjct: 53 GYAYVNFQQP--ADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFSAFG+ILSCKV DE G SKGYGFVHFET+EAA ++IEK+NGMLLN + VF
Sbjct: 111 DNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVF 169
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GK 241
VG+F RKERE ELG +AK FTNVYIKNFGED +DE+LK++F +G S +VM ++ GK
Sbjct: 170 VGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGK 229
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
S+GFGFV++E E A+KAV NGKE++GK +YVGRAQKK ER ELKR+FE +K +R+
Sbjct: 230 SKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRIT 289
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLYVKNLDD IDDERLRKEF+PFGTITSAK
Sbjct: 290 RYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAK 324
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 93/232 (40%), Positives = 133/232 (57%), Gaps = 16/232 (6%)
Query: 77 TERALDTMNFDALKGRPIRI----MWSQRDPSL--RKSGVGNVFIKNLDKSIDNKAMYDT 130
ERA++ MN L R + + +R+ L R NV+IKN + +D++ + D
Sbjct: 151 AERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDL 210
Query: 131 FSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRK 190
F FG LS KV DE G SKG+GFV FE E A K+++++NG LN K ++VG+ +
Sbjct: 211 FGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKV 270
Query: 191 EREKELGEKAKLF----------TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDG 240
ER+ EL K + N+Y+KN + +DE+L++ F P+GTITS +VM G
Sbjct: 271 ERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGG 330
Query: 241 KSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRF 292
+S+GFGFV + SPE A KAV NG+ V K LYV AQ+K ER L ++
Sbjct: 331 RSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAHLTNQY 382
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 124/236 (52%), Gaps = 17/236 (7%)
Query: 102 DPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFET 160
+PS + ++++ +L +Y+ FS G ILS +V +D S GY +V+F+
Sbjct: 2 NPSAPSYPMASLYVGDLHPDATEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 161 EEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKL 220
A ++++ +N ++ K V + +R+ L + N++IKN + +++ L
Sbjct: 62 PADAERALDTMNFDVIKGKPVRIM----WSQRDPSLRKSG--VGNIFIKNLDKSIDNKAL 115
Query: 221 KEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
+ F +G I S +V+ ++ S+G+GFV +E+ E AE+A++ NG ++ + ++VGR +
Sbjct: 116 YDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKS 175
Query: 281 KAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ ER EL R + N+Y+KN + +DDERL+ F FG S K
Sbjct: 176 RKEREAELGARAKEF----------TNVYIKNFGEDMDDERLKDLFGKFGPALSVK 221
>gi|390465724|ref|XP_002750686.2| PREDICTED: polyadenylate-binding protein 4 [Callithrix jacchus]
Length = 656
Score = 403 bits (1035), Expect = e-110, Method: Compositional matrix adjust.
Identities = 199/275 (72%), Positives = 230/275 (83%), Gaps = 4/275 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD +KG+PIRIMWSQRDPSLRKSGVGNVFIKNLDKSI
Sbjct: 53 GYAYVNFQQP--ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFSAFG+ILSCKV DE G SKGY FVHFET+EAA+K+IEK+NGMLLN + VF
Sbjct: 111 DNKALYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVF 169
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGK 241
VG+F RKERE ELG KAK FTNVYIKNFGE+ +DE LKE+F +G S +VM + +GK
Sbjct: 170 VGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFIQFGKTLSVKVMRDPNGK 229
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
S+GFGFV+YE E A KAV+ NGKE+ GKI++VGRAQKK ER ELKR+FE LK ER++
Sbjct: 230 SKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERIS 289
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLY+KNLDD+IDDE+LRKEF+PFG+ITSAK
Sbjct: 290 RYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAK 324
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 84/191 (43%), Positives = 121/191 (63%), Gaps = 10/191 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV+IKN + +D++++ + F FG LS KV +D G SKG+GFV +E E ANK++E++
Sbjct: 192 NVYIKNFGEEVDDESLKELFIQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEM 251
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKLK 221
NG ++ KI+FVG+ + ER+ EL K + N+YIKN + +DEKL+
Sbjct: 252 NGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLR 311
Query: 222 EMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKK 281
+ F P+G+ITS +VM DG+S+GFGFV + SPE A KAV NG+ V K LYV AQ+K
Sbjct: 312 KEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRK 371
Query: 282 AERTQELKRRF 292
ER L ++
Sbjct: 372 EERKAHLTNQY 382
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 121/228 (53%), Gaps = 17/228 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + +Y+ FS G +LS +V +D S GY +V+F+ A +++
Sbjct: 10 MASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERAL 69
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N ++ K + I +R+ L + NV+IKN + +++ L + F +G
Sbjct: 70 DTMNFDVIKGKPI----RIMWSQRDPSLRKSG--VGNVFIKNLDKSIDNKALYDTFSAFG 123
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S +V+ ++ S+G+ FV +E+ E A+KA++ NG ++ + ++VGR + + ER EL
Sbjct: 124 NILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAEL 183
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ + N+Y+KN + +DDE L++ F FG S K
Sbjct: 184 GAKAKEF----------TNVYIKNFGEEVDDESLKELFIQFGKTLSVK 221
>gi|348517413|ref|XP_003446228.1| PREDICTED: polyadenylate-binding protein 4 [Oreochromis niloticus]
Length = 627
Score = 403 bits (1035), Expect = e-110, Method: Compositional matrix adjust.
Identities = 197/275 (71%), Positives = 230/275 (83%), Gaps = 4/275 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD +KG+PIRIMWSQRDPSLRKSGVGNVFIKNLDKSI
Sbjct: 53 GYAYVNFSQP--ADAERALDTMNFDVVKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFSAFG+ILSCKV DE G SKGY FVHFET++AA+++IEK+NGMLLN + VF
Sbjct: 111 DNKALYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQDAADRAIEKMNGMLLNDRKVF 169
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGK 241
VG+F RKERE ELG KAK FTNVYIKNFG+D +DE+LKE+F+ YG S +VM + GK
Sbjct: 170 VGRFKSRKEREAELGAKAKEFTNVYIKNFGDDMDDERLKEIFDKYGKTLSVKVMTDPSGK 229
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
SRGFGFV+YE E A KAV+ NG E++GK ++VGRAQKK ER ELKR+FE LK ER++
Sbjct: 230 SRGFGFVSYEKHEDANKAVEEMNGTELNGKTVFVGRAQKKMERQAELKRKFEQLKQERIS 289
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLY+KNLDD+IDDE+LRKEF+PFG+ITSAK
Sbjct: 290 RYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAK 324
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 83/191 (43%), Positives = 117/191 (61%), Gaps = 10/191 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV+IKN +D++ + + F +G LS KV D G S+G+GFV +E E ANK++E++
Sbjct: 192 NVYIKNFGDDMDDERLKEIFDKYGKTLSVKVMTDPSGKSRGFGFVSYEKHEDANKAVEEM 251
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKLK 221
NG LN K VFVG+ + ER+ EL K + N+YIKN + +DEKL+
Sbjct: 252 NGTELNGKTVFVGRAQKKMERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLR 311
Query: 222 EMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKK 281
+ F P+G+ITS +VM +G+S+GFGFV + SPE A KAV NG+ V K LYV AQ+K
Sbjct: 312 KEFSPFGSITSAKVMLEEGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRK 371
Query: 282 AERTQELKRRF 292
ER L ++
Sbjct: 372 EERKAHLTNQY 382
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 121/228 (53%), Gaps = 17/228 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L I +Y+ FS G +LS +V +D S GY +V+F A +++
Sbjct: 10 MASLYVGDLHPDITEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFSQPADAERAL 69
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N ++ K + I +R+ L + NV+IKN + +++ L + F +G
Sbjct: 70 DTMNFDVVKGKPI----RIMWSQRDPSLRKSG--VGNVFIKNLDKSIDNKALYDTFSAFG 123
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S +V+ ++ S+G+ FV +E+ + A++A++ NG ++ + ++VGR + + ER EL
Sbjct: 124 NILSCKVVCDENGSKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSRKEREAEL 183
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ + N+Y+KN D +DDERL++ F +G S K
Sbjct: 184 GAKAKEF----------TNVYIKNFGDDMDDERLKEIFDKYGKTLSVK 221
>gi|281344898|gb|EFB20482.1| hypothetical protein PANDA_020836 [Ailuropoda melanoleuca]
Length = 674
Score = 402 bits (1034), Expect = e-110, Method: Compositional matrix adjust.
Identities = 194/261 (74%), Positives = 225/261 (86%), Gaps = 2/261 (0%)
Query: 77 TERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGS 136
TERALDTMNFD +KG+PIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKA+YDTFSAFG+
Sbjct: 78 TERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGN 137
Query: 137 ILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKEL 196
ILSCKV DE G SKGY FVHFET+EAA+K+IEK+NGMLLN + VFVG+F RKERE EL
Sbjct: 138 ILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAEL 196
Query: 197 GEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGKSRGFGFVAYESPEF 255
G KAK FTNVYIKNFGE+ +DE LKE+F +G S +VM + GKS+GFGFV+YE E
Sbjct: 197 GAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKHED 256
Query: 256 AEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDD 315
A KAV+ NGKE+ GK+++VGRAQKK ER ELKR+FE LK ER++RYQGVNLY+KNLDD
Sbjct: 257 ANKAVEEMNGKEISGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDD 316
Query: 316 SIDDERLRKEFTPFGTITSAK 336
+IDDE+LRKEF+PFG+ITSAK
Sbjct: 317 TIDDEKLRKEFSPFGSITSAK 337
Score = 165 bits (417), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 84/191 (43%), Positives = 122/191 (63%), Gaps = 10/191 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV+IKN + +D++++ + FS FG LS KV +D G SKG+GFV +E E ANK++E++
Sbjct: 205 NVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEM 264
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKLK 221
NG ++ K++FVG+ + ER+ EL K + N+YIKN + +DEKL+
Sbjct: 265 NGKEISGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLR 324
Query: 222 EMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKK 281
+ F P+G+ITS +VM DG+S+GFGFV + SPE A KAV NG+ V K LYV AQ+K
Sbjct: 325 KEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRK 384
Query: 282 AERTQELKRRF 292
ER L ++
Sbjct: 385 EERKAHLTNQY 395
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 117/235 (49%), Gaps = 18/235 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + +Y+ FS G +LS V +D S GY +V+F+ +
Sbjct: 10 MASLYVGDLHSDVTEAMLYEKFSPAGPVLSIWVCRDMITRRSLGYAYVNFQQPADVMPTS 69
Query: 169 EKVNGMLLNSKI-------VFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLK 221
+ + + + V GK I +++ + NV+IKN + +++ L
Sbjct: 70 TSSSPLTVTERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALY 129
Query: 222 EMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKK 281
+ F +G I S +V+ ++ S+G+ FV +E+ E A+KA++ NG ++ + ++VGR + +
Sbjct: 130 DTFSAFGNILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSR 189
Query: 282 AERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
ER EL + + N+Y+KN + +DDE L++ F+ FG S K
Sbjct: 190 KEREAELGAKAKEF----------TNVYIKNFGEEVDDESLKELFSQFGKTLSVK 234
>gi|41386798|ref|NP_776993.1| polyadenylate-binding protein 1 [Bos taurus]
gi|46367787|ref|NP_002559.2| polyadenylate-binding protein 1 [Homo sapiens]
gi|383872540|ref|NP_001244826.1| polyadenylate-binding protein 1 [Macaca mulatta]
gi|73974130|ref|XP_856708.1| PREDICTED: polyadenylate-binding protein 1 isoform 6 [Canis lupus
familiaris]
gi|194036975|ref|XP_001927782.1| PREDICTED: polyadenylate-binding protein 1 [Sus scrofa]
gi|332213999|ref|XP_003256115.1| PREDICTED: polyadenylate-binding protein 1 [Nomascus leucogenys]
gi|344273312|ref|XP_003408467.1| PREDICTED: polyadenylate-binding protein 1-like [Loxodonta
africana]
gi|402878853|ref|XP_003903080.1| PREDICTED: polyadenylate-binding protein 1 [Papio anubis]
gi|3183544|sp|P11940.2|PABP1_HUMAN RecName: Full=Polyadenylate-binding protein 1; Short=PABP-1;
Short=Poly(A)-binding protein 1
gi|47117093|sp|P61286.1|PABP1_BOVIN RecName: Full=Polyadenylate-binding protein 1; Short=PABP-1;
Short=Poly(A)-binding protein 1
gi|1562511|gb|AAD08718.1| poly(A)-binding protein [Homo sapiens]
gi|8979741|emb|CAB96752.1| polyadenylate-binding protein 1 [Bos taurus]
gi|16358990|gb|AAH15958.1| PABPC1 protein [Homo sapiens]
gi|23270713|gb|AAH23520.1| Poly(A) binding protein, cytoplasmic 1 [Homo sapiens]
gi|74268035|gb|AAI02366.1| Poly(A) binding protein, cytoplasmic 1 [Bos taurus]
gi|119612221|gb|EAW91815.1| poly(A) binding protein, cytoplasmic 1, isoform CRA_b [Homo
sapiens]
gi|119612223|gb|EAW91817.1| poly(A) binding protein, cytoplasmic 1, isoform CRA_b [Homo
sapiens]
gi|123993665|gb|ABM84434.1| poly(A) binding protein, cytoplasmic 1 [synthetic construct]
gi|123999981|gb|ABM87499.1| poly(A) binding protein, cytoplasmic 1 [synthetic construct]
gi|168278070|dbj|BAG11013.1| polyadenylate-binding protein 1 [synthetic construct]
gi|296480464|tpg|DAA22579.1| TPA: polyadenylate-binding protein 1 [Bos taurus]
gi|380811722|gb|AFE77736.1| polyadenylate-binding protein 1 [Macaca mulatta]
gi|384940022|gb|AFI33616.1| polyadenylate-binding protein 1 [Macaca mulatta]
gi|384940024|gb|AFI33617.1| polyadenylate-binding protein 1 [Macaca mulatta]
Length = 636
Score = 402 bits (1034), Expect = e-110, Method: Compositional matrix adjust.
Identities = 196/275 (71%), Positives = 229/275 (83%), Gaps = 4/275 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD +KG+P+RIMWSQRDPSLRKSGVGN+FIKNLDKSI
Sbjct: 53 GYAYVNFQQP--ADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFSAFG+ILSCKV DE G SKGYGFVHFET+EAA ++IEK+NGMLLN + VF
Sbjct: 111 DNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVF 169
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GK 241
VG+F RKERE ELG +AK FTNVYIKNFGED +DE+LK++F +G S +VM ++ GK
Sbjct: 170 VGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGK 229
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
S+GFGFV++E E A+KAV NGKE++GK +YVGRAQKK ER ELKR+FE +K +R+
Sbjct: 230 SKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRIT 289
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLYVKNLDD IDDERLRKEF+PFGTITSAK
Sbjct: 290 RYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAK 324
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 93/232 (40%), Positives = 133/232 (57%), Gaps = 16/232 (6%)
Query: 77 TERALDTMNFDALKGRPIRI----MWSQRDPSL--RKSGVGNVFIKNLDKSIDNKAMYDT 130
ERA++ MN L R + + +R+ L R NV+IKN + +D++ + D
Sbjct: 151 AERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDL 210
Query: 131 FSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRK 190
F FG LS KV DE G SKG+GFV FE E A K+++++NG LN K ++VG+ +
Sbjct: 211 FGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKV 270
Query: 191 EREKELGEKAKLF----------TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDG 240
ER+ EL K + N+Y+KN + +DE+L++ F P+GTITS +VM G
Sbjct: 271 ERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGG 330
Query: 241 KSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRF 292
+S+GFGFV + SPE A KAV NG+ V K LYV AQ+K ER L ++
Sbjct: 331 RSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAHLTNQY 382
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 125/236 (52%), Gaps = 17/236 (7%)
Query: 102 DPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFET 160
+PS + ++++ +L + +Y+ FS G ILS +V +D S GY +V+F+
Sbjct: 2 NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 161 EEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKL 220
A ++++ +N ++ K V + +R+ L + N++IKN + +++ L
Sbjct: 62 PADAERALDTMNFDVIKGKPVRIM----WSQRDPSLRKSG--VGNIFIKNLDKSIDNKAL 115
Query: 221 KEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
+ F +G I S +V+ ++ S+G+GFV +E+ E AE+A++ NG ++ + ++VGR +
Sbjct: 116 YDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKS 175
Query: 281 KAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ ER EL R + N+Y+KN + +DDERL+ F FG S K
Sbjct: 176 RKEREAELGARAKEF----------TNVYIKNFGEDMDDERLKDLFGKFGPALSVK 221
>gi|71896197|ref|NP_001026768.1| polyadenylate-binding protein 1 [Gallus gallus]
gi|53130422|emb|CAG31540.1| hypothetical protein RCJMB04_7l20 [Gallus gallus]
Length = 637
Score = 402 bits (1034), Expect = e-110, Method: Compositional matrix adjust.
Identities = 196/275 (71%), Positives = 229/275 (83%), Gaps = 4/275 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD +KG+P+RIMWSQRDPSLRKSGVGN+FIKNLDKSI
Sbjct: 53 GYAYVNFQQP--ADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFSAFG+ILSCKV DE G SKGYGFVHFET+EAA ++IEK+NGMLLN + VF
Sbjct: 111 DNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVF 169
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GK 241
VG+F RKERE ELG +AK FTNVYIKNFGED +DE+LKE+F +G S +VM ++ GK
Sbjct: 170 VGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGK 229
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
S+GFGFV++E E A+KAV NGKE++GK +YVGRAQK+ ER ELKR+FE +K +R+
Sbjct: 230 SKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKRVERQTELKRKFEQMKQDRIT 289
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLYVKNLDD IDDERLRKEF+PFGTITSAK
Sbjct: 290 RYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAK 324
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 93/232 (40%), Positives = 133/232 (57%), Gaps = 16/232 (6%)
Query: 77 TERALDTMNFDALKGRPIRI----MWSQRDPSL--RKSGVGNVFIKNLDKSIDNKAMYDT 130
ERA++ MN L R + + +R+ L R NV+IKN + +D++ + +
Sbjct: 151 AERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKEL 210
Query: 131 FSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRK 190
F FG LS KV DE G SKG+GFV FE E A K+++++NG LN K ++VG+ R
Sbjct: 211 FGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKRV 270
Query: 191 EREKELGEKAKLF----------TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDG 240
ER+ EL K + N+Y+KN + +DE+L++ F P+GTITS +VM G
Sbjct: 271 ERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGG 330
Query: 241 KSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRF 292
+S+GFGFV + SPE A KAV NG+ V K LYV AQ+K ER L ++
Sbjct: 331 RSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAHLTNQY 382
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 126/236 (53%), Gaps = 17/236 (7%)
Query: 102 DPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFET 160
+PS + ++++ +L + +Y+ FS G ILS +V +D S GY +V+F+
Sbjct: 2 NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 161 EEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKL 220
A ++++ +N ++ K V I +R+ L + N++IKN + +++ L
Sbjct: 62 PADAERALDTMNFDVIKGKPV----RIMWSQRDPSLRKSG--VGNIFIKNLDKSIDNKAL 115
Query: 221 KEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
+ F +G I S +V+ ++ S+G+GFV +E+ E AE+A++ NG ++ + ++VGR +
Sbjct: 116 YDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKS 175
Query: 281 KAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ ER EL R + N+Y+KN + +DDERL++ F FG S K
Sbjct: 176 RKEREAELGARAKEF----------TNVYIKNFGEDMDDERLKELFGKFGPALSVK 221
>gi|291388359|ref|XP_002710763.1| PREDICTED: poly A binding protein, cytoplasmic 4 [Oryctolagus
cuniculus]
Length = 636
Score = 402 bits (1034), Expect = e-110, Method: Compositional matrix adjust.
Identities = 196/275 (71%), Positives = 229/275 (83%), Gaps = 4/275 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD +KG+P+RIMWSQRDPSLRKSGVGN+FIKNLDKSI
Sbjct: 53 GYAYVNFQQP--ADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFSAFG+ILSCKV DE G SKGYGFVHFET+EAA ++IEK+NGMLLN + VF
Sbjct: 111 DNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVF 169
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GK 241
VG+F RKERE ELG +AK FTNVYIKNFGED +DE+LK++F +G S +VM ++ GK
Sbjct: 170 VGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGK 229
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
S+GFGFV++E E A+KAV NGKE++GK +YVGRAQKK ER ELKR+FE +K +R+
Sbjct: 230 SKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRIT 289
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLYVKNLDD IDDERLRKEF+PFGTITSAK
Sbjct: 290 RYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAK 324
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 93/232 (40%), Positives = 133/232 (57%), Gaps = 16/232 (6%)
Query: 77 TERALDTMNFDALKGRPIRI----MWSQRDPSL--RKSGVGNVFIKNLDKSIDNKAMYDT 130
ERA++ MN L R + + +R+ L R NV+IKN + +D++ + D
Sbjct: 151 AERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDL 210
Query: 131 FSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRK 190
F FG LS KV DE G SKG+GFV FE E A K+++++NG LN K ++VG+ +
Sbjct: 211 FGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKV 270
Query: 191 EREKELGEKAKLF----------TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDG 240
ER+ EL K + N+Y+KN + +DE+L++ F P+GTITS +VM G
Sbjct: 271 ERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGG 330
Query: 241 KSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRF 292
+S+GFGFV + SPE A KAV NG+ V K LYV AQ+K ER L ++
Sbjct: 331 RSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAHLTNQY 382
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 125/236 (52%), Gaps = 17/236 (7%)
Query: 102 DPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFET 160
+PS + ++++ +L + +Y+ FS G ILS +V +D S GY +V+F+
Sbjct: 2 NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 161 EEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKL 220
A ++++ +N ++ K V + +R+ L + N++IKN + +++ L
Sbjct: 62 PADAERALDTMNFDVIKGKPVRIM----WSQRDPSLRKSG--VGNIFIKNLDKSIDNKAL 115
Query: 221 KEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
+ F +G I S +V+ ++ S+G+GFV +E+ E AE+A++ NG ++ + ++VGR +
Sbjct: 116 YDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKS 175
Query: 281 KAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ ER EL R + N+Y+KN + +DDERL+ F FG S K
Sbjct: 176 RKEREAELGARAKEF----------TNVYIKNFGEDMDDERLKDLFGKFGPALSVK 221
>gi|291227649|ref|XP_002733794.1| PREDICTED: polyadenylate-binding protein 1-like [Saccoglossus
kowalevskii]
Length = 655
Score = 402 bits (1034), Expect = e-110, Method: Compositional matrix adjust.
Identities = 198/276 (71%), Positives = 225/276 (81%), Gaps = 5/276 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALD+MNFD +KGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI
Sbjct: 53 GYAYVNFQQP--ADAERALDSMNFDVIKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKAMYDTFSAFG ILSCKV DE G SKGYGFVHF TEEAANKSIEKVNGMLLN K V+
Sbjct: 111 DNKAMYDTFSAFGDILSCKVVCDENG-SKGYGFVHFATEEAANKSIEKVNGMLLNGKKVY 169
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND--G 240
VGKF+ RKER +G + K FTNV++KNFG++ +DE L+EMFE YG I S++VM +D G
Sbjct: 170 VGKFMSRKERYDAMGGQQKKFTNVFVKNFGDELDDEGLREMFERYGKIVSHKVMQDDHSG 229
Query: 241 KSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERL 300
+++GFGFV +E P AE A N K+++G+ILYVGRAQKK ER EL+ RFE++K ER
Sbjct: 230 RNKGFGFVCFEDPIDAENACDDLNMKDINGRILYVGRAQKKIERQAELRNRFELMKAERA 289
Query: 301 NRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
NRYQGVNLYVKNLDDS+DDERLRKEF PFGTITSAK
Sbjct: 290 NRYQGVNLYVKNLDDSLDDERLRKEFMPFGTITSAK 325
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 79/208 (37%), Positives = 121/208 (58%), Gaps = 18/208 (8%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQ-GNSKGYGFVHFETEEAANKSIEK 170
NVF+KN +D++ + + F +G I+S KV QD+ G +KG+GFV FE A + +
Sbjct: 192 NVFVKNFGDELDDEGLREMFERYGKIVSHKVMQDDHSGRNKGFGFVCFEDPIDAENACDD 251
Query: 171 VNGMLLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKL 220
+N +N +I++VG+ + ER+ EL + +L N+Y+KN + +DE+L
Sbjct: 252 LNMKDINGRILYVGRAQKKIERQAELRNRFELMKAERANRYQGVNLYVKNLDDSLDDERL 311
Query: 221 KEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
++ F P+GTITS +VM+ G+S+GFGFV + SPE A KAV NG+ V K LYV AQ+
Sbjct: 312 RKEFMPFGTITSAKVMSEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVSTKPLYVALAQR 371
Query: 281 KAERTQELKRRFEMLKIERLNRYQGVNL 308
K +R L +F + R G+ L
Sbjct: 372 KEDRKAHLASQF-------MQRMSGLRL 392
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 126/239 (52%), Gaps = 23/239 (9%)
Query: 102 DPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFET 160
+PS + ++++ +L + +++ FS+ G ILS +V +D S GY +V+F+
Sbjct: 2 NPSGPSYPMASLYVGDLHNDVTEAMLFEKFSSAGPILSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 161 EEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKL 220
A ++++ +N ++ + + I +R+ L + NV+IKN + +++ +
Sbjct: 62 PADAERALDSMNFDVIKGRPI----RIMWSQRDPSLRKSG--VGNVFIKNLDKSIDNKAM 115
Query: 221 KEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
+ F +G I S +V+ ++ S+G+GFV + + E A K+++ NG ++GK +YVG+
Sbjct: 116 YDTFSAFGDILSCKVVCDENGSKGYGFVHFATEEAANKSIEKVNGMLLNGKKVYVGKFMS 175
Query: 281 KAERTQEL---KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ ER + +++F N++VKN D +DDE LR+ F +G I S K
Sbjct: 176 RKERYDAMGGQQKKF-------------TNVFVKNFGDELDDEGLREMFERYGKIVSHK 221
>gi|147899475|ref|NP_001085069.1| polyadenylate-binding protein 1-B [Xenopus laevis]
gi|82236793|sp|Q6IP09.1|PABPB_XENLA RecName: Full=Polyadenylate-binding protein 1-B; Short=PABP-1-B;
Short=Poly(A)-binding protein 1-B; Short=xPABP1-B;
AltName: Full=Cytoplasmic poly(A)-binding protein 1-B
gi|47940242|gb|AAH72110.1| MGC79060 protein [Xenopus laevis]
gi|80476254|gb|AAI08463.1| MGC79060 protein [Xenopus laevis]
Length = 633
Score = 402 bits (1034), Expect = e-110, Method: Compositional matrix adjust.
Identities = 197/275 (71%), Positives = 228/275 (82%), Gaps = 4/275 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD +KG+P+RIMWSQRDPSLRKSGVGN+FIKNLDKSI
Sbjct: 53 GYAYVNFQQP--ADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFSAFG+ILSCKV DE G SKGYGFVHFET+EAA ++I+K+NGMLLN + VF
Sbjct: 111 DNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIDKMNGMLLNDRKVF 169
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GK 241
VG+F RKERE ELG +AK FTNVYIKNFGED +DE+LKE F YG S +VM +D GK
Sbjct: 170 VGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKEWFGQYGAALSVKVMTDDHGK 229
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
SRGFGFV++E E A+KAV NGK+++GK ++VGRAQKK ER ELKR+FE +K +R+
Sbjct: 230 SRGFGFVSFERHEDAQKAVDDMNGKDLNGKAIFVGRAQKKVERQTELKRKFEQMKQDRIT 289
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLYVKNLDD IDDERLRKEFTPFG+ITSAK
Sbjct: 290 RYQGVNLYVKNLDDGIDDERLRKEFTPFGSITSAK 324
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 90/232 (38%), Positives = 133/232 (57%), Gaps = 16/232 (6%)
Query: 77 TERALDTMNFDALKGRPIRI----MWSQRDPSL--RKSGVGNVFIKNLDKSIDNKAMYDT 130
ERA+D MN L R + + +R+ L R NV+IKN + +D++ + +
Sbjct: 151 AERAIDKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKEW 210
Query: 131 FSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRK 190
F +G+ LS KV D+ G S+G+GFV FE E A K+++ +NG LN K +FVG+ +
Sbjct: 211 FGQYGAALSVKVMTDDHGKSRGFGFVSFERHEDAQKAVDDMNGKDLNGKAIFVGRAQKKV 270
Query: 191 EREKELGEKAKLF----------TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDG 240
ER+ EL K + N+Y+KN + +DE+L++ F P+G+ITS +VM G
Sbjct: 271 ERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFTPFGSITSAKVMMEGG 330
Query: 241 KSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRF 292
+S+GFGFV + SPE A KAV NG+ V K LYV AQ+K ER L ++
Sbjct: 331 RSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAHLTNQY 382
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 125/236 (52%), Gaps = 17/236 (7%)
Query: 102 DPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFET 160
+PS + ++++ +L + +Y+ FS G ILS +V +D S GY +V+F+
Sbjct: 2 NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 161 EEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKL 220
A ++++ +N ++ K V I +R+ L + N++IKN + +++ L
Sbjct: 62 PADAERALDTMNFDVIKGKPV----RIMWSQRDPSLRKSG--VGNIFIKNLDKSIDNKAL 115
Query: 221 KEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
+ F +G I S +V+ ++ S+G+GFV +E+ E AE+A+ NG ++ + ++VGR +
Sbjct: 116 YDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIDKMNGMLLNDRKVFVGRFKS 175
Query: 281 KAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ ER EL R + N+Y+KN + +DDERL++ F +G S K
Sbjct: 176 RKEREAELGARAKEF----------TNVYIKNFGEDMDDERLKEWFGQYGAALSVK 221
>gi|431901758|gb|ELK08635.1| Polyadenylate-binding protein 1 [Pteropus alecto]
Length = 636
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 196/275 (71%), Positives = 229/275 (83%), Gaps = 4/275 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD +KG+P+RIMWSQRDPSLRKSGVGN+FIKNLDKSI
Sbjct: 53 GYAYVNFQQP--ADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFSAFG+ILSCKV DE G SKGYGFVHFET+EAA ++IEK+NGMLLN + VF
Sbjct: 111 DNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVF 169
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GK 241
VG+F RKERE ELG +AK FTNVYIKNFGED +DE+LK++F +G S +VM ++ GK
Sbjct: 170 VGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGK 229
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
S+GFGFV++E E A+KAV NGKE++GK +YVGRAQKK ER ELKR+FE +K +R+
Sbjct: 230 SKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRIT 289
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLYVKNLDD IDDERLRKEF+PFGTITSAK
Sbjct: 290 RYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAK 324
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 93/232 (40%), Positives = 133/232 (57%), Gaps = 16/232 (6%)
Query: 77 TERALDTMNFDALKGRPIRI----MWSQRDPSL--RKSGVGNVFIKNLDKSIDNKAMYDT 130
ERA++ MN L R + + +R+ L R NV+IKN + +D++ + D
Sbjct: 151 AERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDL 210
Query: 131 FSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRK 190
F FG LS KV DE G SKG+GFV FE E A K+++++NG LN K ++VG+ +
Sbjct: 211 FGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKV 270
Query: 191 EREKELGEKAKLF----------TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDG 240
ER+ EL K + N+Y+KN + +DE+L++ F P+GTITS +VM G
Sbjct: 271 ERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGG 330
Query: 241 KSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRF 292
+S+GFGFV + SPE A KAV NG+ V K LYV AQ+K ER L ++
Sbjct: 331 RSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAHLTNQY 382
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 125/236 (52%), Gaps = 17/236 (7%)
Query: 102 DPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFET 160
+PS + ++++ +L + +Y+ FS G ILS +V +D S GY +V+F+
Sbjct: 2 NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 161 EEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKL 220
A ++++ +N ++ K V + +R+ L + N++IKN + +++ L
Sbjct: 62 PADAERALDTMNFDVIKGKPVRIM----WSQRDPSLRKSG--VGNIFIKNLDKSIDNKAL 115
Query: 221 KEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
+ F +G I S +V+ ++ S+G+GFV +E+ E AE+A++ NG ++ + ++VGR +
Sbjct: 116 YDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKS 175
Query: 281 KAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ ER EL R + N+Y+KN + +DDERL+ F FG S K
Sbjct: 176 RKEREAELGARAKEF----------TNVYIKNFGEDMDDERLKDLFGKFGPALSVK 221
>gi|148229527|ref|NP_001085857.1| poly(A) binding protein, cytoplasmic 4 (inducible form) [Xenopus
laevis]
gi|49118872|gb|AAH73435.1| MGC80927 protein [Xenopus laevis]
Length = 626
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 198/275 (72%), Positives = 229/275 (83%), Gaps = 4/275 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD +KG+PIRIMWSQRDPSLRKSGVGNVFIKNLDKSI
Sbjct: 53 GYAYVNFQQP--ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFSAFG+ILSCKV DE G SKGY FVHFET++AA+++IEK+NGMLLN + VF
Sbjct: 111 DNKALYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQDAADRAIEKMNGMLLNDRKVF 169
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGK 241
VG+F R+ERE ELG KAK FTNVYIKNFGED +DE+LKE F YG S +VM + GK
Sbjct: 170 VGRFKCRREREAELGAKAKEFTNVYIKNFGEDMDDERLKETFSKYGKTLSVKVMTDPSGK 229
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
S+GFGFV++E E A KAV NGK+V+GKI++VGRAQKK ER ELKRRFE LK ER++
Sbjct: 230 SKGFGFVSFERHEDANKAVDDMNGKDVNGKIMFVGRAQKKVERQAELKRRFEQLKQERIS 289
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLY+KNLDD+IDDE+LRKEF+PFG+ITSAK
Sbjct: 290 RYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAK 324
Score = 161 bits (408), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 84/191 (43%), Positives = 120/191 (62%), Gaps = 10/191 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV+IKN + +D++ + +TFS +G LS KV D G SKG+GFV FE E ANK+++ +
Sbjct: 192 NVYIKNFGEDMDDERLKETFSKYGKTLSVKVMTDPSGKSKGFGFVSFERHEDANKAVDDM 251
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKLK 221
NG +N KI+FVG+ + ER+ EL + + N+YIKN + +DEKL+
Sbjct: 252 NGKDVNGKIMFVGRAQKKVERQAELKRRFEQLKQERISRYQGVNLYIKNLDDTIDDEKLR 311
Query: 222 EMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKK 281
+ F P+G+ITS +VM +G+S+GFGFV + SPE A KAV NG+ V K LYV AQ+K
Sbjct: 312 KEFSPFGSITSAKVMLEEGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRK 371
Query: 282 AERTQELKRRF 292
ER L ++
Sbjct: 372 EERKAHLTNQY 382
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 123/228 (53%), Gaps = 17/228 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + +Y+ FS G +LS +V +D S GY +V+F+ A +++
Sbjct: 10 MASLYVGDLHPDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERAL 69
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N ++ K + I +R+ L + NV+IKN + +++ L + F +G
Sbjct: 70 DTMNFDVIKGKPI----RIMWSQRDPSLRKSG--VGNVFIKNLDKSIDNKALYDTFSAFG 123
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S +V+ ++ S+G+ FV +E+ + A++A++ NG ++ + ++VGR + + ER EL
Sbjct: 124 NILSCKVVCDENGSKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKCRREREAEL 183
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ + N+Y+KN + +DDERL++ F+ +G S K
Sbjct: 184 GAKAKEF----------TNVYIKNFGEDMDDERLKETFSKYGKTLSVK 221
>gi|403305068|ref|XP_003943097.1| PREDICTED: polyadenylate-binding protein 1 [Saimiri boliviensis
boliviensis]
Length = 803
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 195/287 (67%), Positives = 231/287 (80%), Gaps = 10/287 (3%)
Query: 51 WDSGYTCHQLGSGAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGV 110
W G C + +P + ERALDTMNFD +KG+P+RIMWSQRDPSLRKSGV
Sbjct: 214 WPCGQPCRD--------EPQRPQLPHAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGV 265
Query: 111 GNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEK 170
GN+FIKNLDKSIDNKA+YDTFSAFG+ILSCKV DE G SKGYGFVHFET+EAA ++IEK
Sbjct: 266 GNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEK 324
Query: 171 VNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTI 230
+NGMLLN + VFVG+F RKERE ELG +AK FTNVYIKNFGED +DE+LK++F +G
Sbjct: 325 MNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPA 384
Query: 231 TSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELK 289
S +VM ++ GKS+GFGFV++E E A+KAV NGKE++GK +YVGRAQKK ER ELK
Sbjct: 385 LSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELK 444
Query: 290 RRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
R+FE +K +R+ RYQGVNLYVKNLDD IDDERLRKEF+PFGTITSAK
Sbjct: 445 RKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAK 491
Score = 158 bits (399), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 83/191 (43%), Positives = 117/191 (61%), Gaps = 10/191 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV+IKN + +D++ + D F FG LS KV DE G SKG+GFV FE E A K+++++
Sbjct: 359 NVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEM 418
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKLK 221
NG LN K ++VG+ + ER+ EL K + N+Y+KN + +DE+L+
Sbjct: 419 NGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLR 478
Query: 222 EMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKK 281
+ F P+GTITS +VM G+S+GFGFV + SPE A KAV NG+ V K LYV AQ+K
Sbjct: 479 KEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRK 538
Query: 282 AERTQELKRRF 292
ER L ++
Sbjct: 539 EERQAHLTNQY 549
>gi|301756358|ref|XP_002914026.1| PREDICTED: polyadenylate-binding protein 1-like [Ailuropoda
melanoleuca]
Length = 636
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 192/262 (73%), Positives = 226/262 (86%), Gaps = 2/262 (0%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D+ERALDTMNFD +KG+P+RIMWSQRDPSLRKSGVGN+FIKNLDKSIDNKA+YDTFSAFG
Sbjct: 64 DSERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFG 123
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCKV DE G SKGYGFVHFET+EAA ++IEK+NGMLLN + VFVG+F RKERE E
Sbjct: 124 NILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPE 254
LG +AK FTNVYIKNFGED +DE+LK++F +G S +VM ++ GKS+GFGFV++E E
Sbjct: 183 LGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHE 242
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A+KAV NGKE++GK +YVGRAQKK ER ELKR+FE +K +R+ RYQGVNLYVKNLD
Sbjct: 243 DAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLD 302
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
D IDDERLRKEF+PFGTITSAK
Sbjct: 303 DGIDDERLRKEFSPFGTITSAK 324
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 93/232 (40%), Positives = 133/232 (57%), Gaps = 16/232 (6%)
Query: 77 TERALDTMNFDALKGRPIRI----MWSQRDPSL--RKSGVGNVFIKNLDKSIDNKAMYDT 130
ERA++ MN L R + + +R+ L R NV+IKN + +D++ + D
Sbjct: 151 AERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDL 210
Query: 131 FSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRK 190
F FG LS KV DE G SKG+GFV FE E A K+++++NG LN K ++VG+ +
Sbjct: 211 FGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKV 270
Query: 191 EREKELGEKAKLF----------TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDG 240
ER+ EL K + N+Y+KN + +DE+L++ F P+GTITS +VM G
Sbjct: 271 ERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGG 330
Query: 241 KSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRF 292
+S+GFGFV + SPE A KAV NG+ V K LYV AQ+K ER L ++
Sbjct: 331 RSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAHLTNQY 382
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 126/236 (53%), Gaps = 17/236 (7%)
Query: 102 DPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFET 160
+PS + ++++ +L + +Y+ FS G ILS ++ +D+ S GY +V+++
Sbjct: 2 NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQ 61
Query: 161 EEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKL 220
+ ++++ +N ++ K V + +R+ L + N++IKN + +++ L
Sbjct: 62 PRDSERALDTMNFDVIKGKPVRIM----WSQRDPSLRKSG--VGNIFIKNLDKSIDNKAL 115
Query: 221 KEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
+ F +G I S +V+ ++ S+G+GFV +E+ E AE+A++ NG ++ + ++VGR +
Sbjct: 116 YDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKS 175
Query: 281 KAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ ER EL R + N+Y+KN + +DDERL+ F FG S K
Sbjct: 176 RKEREAELGARAKEF----------TNVYIKNFGEDMDDERLKDLFGKFGPALSVK 221
>gi|26354649|dbj|BAC40951.1| unnamed protein product [Mus musculus]
Length = 636
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 196/275 (71%), Positives = 229/275 (83%), Gaps = 4/275 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD +KG+P+RIMWSQRDPSLRKSGVGN+FIKNLDKSI
Sbjct: 53 GYAYVNFQQP--ADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFSAFG+ILSCKV DE G SKGYGFVHFET+EAA ++I+K+NGMLLN + VF
Sbjct: 111 DNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIKKMNGMLLNDRKVF 169
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GK 241
VG+F RKERE ELG +AK FTNVYIKNFGED +DE+LKE+F +G S +VM ++ GK
Sbjct: 170 VGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGK 229
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
S+GFGFV++E E A+KAV NGKE++GK +YVGRAQKK ER ELKR+FE +K +R+
Sbjct: 230 SKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRIT 289
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLYVKNLDD IDDERLRKEF+PFGTITSAK
Sbjct: 290 RYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAK 324
Score = 157 bits (396), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 92/232 (39%), Positives = 132/232 (56%), Gaps = 16/232 (6%)
Query: 77 TERALDTMNFDALKGRPIRI----MWSQRDPSL--RKSGVGNVFIKNLDKSIDNKAMYDT 130
ERA+ MN L R + + +R+ L R NV+IKN + +D++ + +
Sbjct: 151 AERAIKKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKEL 210
Query: 131 FSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRK 190
F FG LS KV DE G SKG+GFV FE E A K+++++NG LN K ++VG+ +
Sbjct: 211 FGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKV 270
Query: 191 EREKELGEKAKLF----------TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDG 240
ER+ EL K + N+Y+KN + +DE+L++ F P+GTITS +VM G
Sbjct: 271 ERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGG 330
Query: 241 KSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRF 292
+S+GFGFV + SPE A KAV NG+ V K LYV AQ+K ER L ++
Sbjct: 331 RSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAHLTNQY 382
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 126/236 (53%), Gaps = 17/236 (7%)
Query: 102 DPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFET 160
+PS + ++++ +L + +Y+ FS G ILS +V +D S GY +V+F+
Sbjct: 2 NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 161 EEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKL 220
A ++++ +N ++ K V + +R+ L + N++IKN + +++ L
Sbjct: 62 PADAERALDTMNFDVIKGKPVRIM----WSQRDPSLRKSG--VGNIFIKNLDKSIDNKAL 115
Query: 221 KEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
+ F +G I S +V+ ++ S+G+GFV +E+ E AE+A++ NG ++ + ++VGR +
Sbjct: 116 YDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIKKMNGMLLNDRKVFVGRFKS 175
Query: 281 KAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ ER EL R + N+Y+KN + +DDERL++ F FG S K
Sbjct: 176 RKEREAELGARAKEF----------TNVYIKNFGEDMDDERLKELFGKFGPALSVK 221
>gi|432937502|ref|XP_004082431.1| PREDICTED: polyadenylate-binding protein 4-like [Oryzias latipes]
Length = 629
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 197/275 (71%), Positives = 231/275 (84%), Gaps = 4/275 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD +KG+PIRIMWSQRDPSLRKSGVGNVFIKNLDKSI
Sbjct: 53 GYAYVNFSQP--ADAERALDTMNFDVVKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFSAFG+ILSCKV DE G SKGY FVHFET++AA+++IEK+NGMLLN + VF
Sbjct: 111 DNKALYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQDAADRAIEKMNGMLLNDRKVF 169
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGK 241
VG+F RKERE ELG KAK FTNVYIKNFG++ DE+LKEMFE YG S +VM ++ GK
Sbjct: 170 VGRFKSRKEREAELGAKAKEFTNVYIKNFGDEMEDEQLKEMFEKYGKTLSVKVMTDSSGK 229
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
SRGFGFV++E E A KAV+ NG E++GK ++VGRAQKK ER ELKR+FE+LK ER++
Sbjct: 230 SRGFGFVSFEKHEDANKAVEEINGTELNGKTVFVGRAQKKMERQAELKRKFELLKQERIS 289
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLY+KNLDD+IDDE+LRKEF+PFG+ITSAK
Sbjct: 290 RYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAK 324
Score = 164 bits (415), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 85/191 (44%), Positives = 118/191 (61%), Gaps = 10/191 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV+IKN ++++ + + F +G LS KV D G S+G+GFV FE E ANK++E++
Sbjct: 192 NVYIKNFGDEMEDEQLKEMFEKYGKTLSVKVMTDSSGKSRGFGFVSFEKHEDANKAVEEI 251
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKLK 221
NG LN K VFVG+ + ER+ EL K +L N+YIKN + +DEKL+
Sbjct: 252 NGTELNGKTVFVGRAQKKMERQAELKRKFELLKQERISRYQGVNLYIKNLDDTIDDEKLR 311
Query: 222 EMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKK 281
+ F P+G+ITS +VM DG+S+GFGFV + SPE A KAV NG+ V K LYV AQ+K
Sbjct: 312 KEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRK 371
Query: 282 AERTQELKRRF 292
ER L ++
Sbjct: 372 EERKAHLTNQY 382
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 121/228 (53%), Gaps = 17/228 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L I +Y+ FS G +LS +V +D S GY +V+F A +++
Sbjct: 10 MASLYVGDLHPDITEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFSQPADAERAL 69
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N ++ K + I +R+ L + NV+IKN + +++ L + F +G
Sbjct: 70 DTMNFDVVKGKPI----RIMWSQRDPSLRKSG--VGNVFIKNLDKSIDNKALYDTFSAFG 123
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S +V+ ++ S+G+ FV +E+ + A++A++ NG ++ + ++VGR + + ER EL
Sbjct: 124 NILSCKVVCDENGSKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSRKEREAEL 183
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ + N+Y+KN D ++DE+L++ F +G S K
Sbjct: 184 GAKAKEF----------TNVYIKNFGDEMEDEQLKEMFEKYGKTLSVK 221
>gi|53754|emb|CAA46522.1| poly(A) binding protein [Mus musculus]
Length = 636
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 196/275 (71%), Positives = 229/275 (83%), Gaps = 4/275 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD +KG+P+RIMWSQRDPSLRKSGVGN+FIKNLDKSI
Sbjct: 53 GYAYVNFQQP--ADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFSAFG+ILSCKV DE G SKGYGFVHFET+EAA ++IEK+NGMLLN + VF
Sbjct: 111 DNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVF 169
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GK 241
VG+F +KERE ELG +AK FTNVYIKNFGED +DE+LKE+F +G S +VM ++ GK
Sbjct: 170 VGRFKSQKEREAELGARAKEFTNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGK 229
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
S+GFGFV++E E A+KAV NGKE++GK +YVGRAQKK ER ELKR+FE +K +R+
Sbjct: 230 SKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRIT 289
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLYVKNLDD IDDERLRKEF+PFGTITSAK
Sbjct: 290 RYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAK 324
Score = 158 bits (399), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 92/232 (39%), Positives = 133/232 (57%), Gaps = 16/232 (6%)
Query: 77 TERALDTMNFDALKGRPIRI----MWSQRDPSL--RKSGVGNVFIKNLDKSIDNKAMYDT 130
ERA++ MN L R + + +R+ L R NV+IKN + +D++ + +
Sbjct: 151 AERAIEKMNGMLLNDRKVFVGRFKSQKEREAELGARAKEFTNVYIKNFGEDMDDERLKEL 210
Query: 131 FSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRK 190
F FG LS KV DE G SKG+GFV FE E A K+++++NG LN K ++VG+ +
Sbjct: 211 FGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKV 270
Query: 191 EREKELGEKAKLF----------TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDG 240
ER+ EL K + N+Y+KN + +DE+L++ F P+GTITS +VM G
Sbjct: 271 ERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGG 330
Query: 241 KSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRF 292
+S+GFGFV + SPE A KAV NG+ V K LYV AQ+K ER L ++
Sbjct: 331 RSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAHLTNQY 382
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 126/236 (53%), Gaps = 17/236 (7%)
Query: 102 DPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFET 160
+PS + ++++ +L + +Y+ FS G ILS +V +D S GY +V+F+
Sbjct: 2 NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 161 EEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKL 220
A ++++ +N ++ K V + +R+ L + N++IKN + +++ L
Sbjct: 62 PADAERALDTMNFDVIKGKPVRIM----WSQRDPSLRKSG--VGNIFIKNLDKSIDNKAL 115
Query: 221 KEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
+ F +G I S +V+ ++ S+G+GFV +E+ E AE+A++ NG ++ + ++VGR +
Sbjct: 116 YDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKS 175
Query: 281 KAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ ER EL R + N+Y+KN + +DDERL++ F FG S K
Sbjct: 176 QKEREAELGARAKEF----------TNVYIKNFGEDMDDERLKELFGKFGPALSVK 221
>gi|449268618|gb|EMC79472.1| Polyadenylate-binding protein 4 [Columba livia]
Length = 630
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 196/275 (71%), Positives = 230/275 (83%), Gaps = 4/275 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD +KG+PIRIMWSQRDPSLRKSGVGNVFIKNLDKSI
Sbjct: 53 GYAYVNFQQP--ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFSAFG+ILSCKV DE G SKGY FVHFET++AA+++IEK+NGMLLN + VF
Sbjct: 111 DNKALYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQDAADRAIEKMNGMLLNDRKVF 169
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GK 241
VG+F RKERE ELG KAK FTNVYIKNFG+D +DE+LKE+F YG S +VM + GK
Sbjct: 170 VGRFKSRKEREAELGAKAKEFTNVYIKNFGDDMDDERLKELFSKYGKTLSVKVMTDPTGK 229
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
S+GFGFV++E E A KAV+ NGK+++GK+++VGRAQKK ER ELKR+FE LK ERL+
Sbjct: 230 SKGFGFVSFEKHEDANKAVEEMNGKDINGKMVFVGRAQKKVERQAELKRKFEQLKQERLS 289
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLY+KNLDD+IDDE+LRKEF+PFG ITSAK
Sbjct: 290 RYQGVNLYIKNLDDTIDDEKLRKEFSPFGAITSAK 324
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 86/191 (45%), Positives = 118/191 (61%), Gaps = 10/191 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV+IKN +D++ + + FS +G LS KV D G SKG+GFV FE E ANK++E++
Sbjct: 192 NVYIKNFGDDMDDERLKELFSKYGKTLSVKVMTDPTGKSKGFGFVSFEKHEDANKAVEEM 251
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKLK 221
NG +N K+VFVG+ + ER+ EL K + N+YIKN + +DEKL+
Sbjct: 252 NGKDINGKMVFVGRAQKKVERQAELKRKFEQLKQERLSRYQGVNLYIKNLDDTIDDEKLR 311
Query: 222 EMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKK 281
+ F P+G ITS +VM DG+S+GFGFV + SPE A KAV NG+ V K LYV AQ+K
Sbjct: 312 KEFSPFGAITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRK 371
Query: 282 AERTQELKRRF 292
ER L ++
Sbjct: 372 EERKAHLTNQY 382
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 123/228 (53%), Gaps = 17/228 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + +Y+ FS G +LS +V +D S GY +V+F+ A +++
Sbjct: 10 MASLYVGDLHPDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERAL 69
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N ++ K + I +R+ L + NV+IKN + +++ L + F +G
Sbjct: 70 DTMNFDVIKGKPI----RIMWSQRDPSLRKSG--VGNVFIKNLDKSIDNKALYDTFSAFG 123
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S +V+ ++ S+G+ FV +E+ + A++A++ NG ++ + ++VGR + + ER EL
Sbjct: 124 NILSCKVVCDENGSKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSRKEREAEL 183
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ + N+Y+KN D +DDERL++ F+ +G S K
Sbjct: 184 GAKAKEF----------TNVYIKNFGDDMDDERLKELFSKYGKTLSVK 221
>gi|432881580|ref|XP_004073850.1| PREDICTED: polyadenylate-binding protein 1-like [Oryzias latipes]
Length = 631
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 195/275 (70%), Positives = 228/275 (82%), Gaps = 4/275 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD +KG+P+RIMWSQRDPSLRKSGVGN+FIKNLDKSI
Sbjct: 53 GYAYVNFQQP--ADAERALDTMNFDVIKGQPVRIMWSQRDPSLRKSGVGNIFIKNLDKSI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFSAFG+ILSCKV DE G S+GYGFVHFET +AA ++IEK+NGMLLN + VF
Sbjct: 111 DNKALYDTFSAFGNILSCKVVCDENG-SRGYGFVHFETHDAAERAIEKMNGMLLNDRKVF 169
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GK 241
VG+F RKERE ELG +A+ FTNVYIKNFGED +DEKLKE+F +G TS RVM ++ G
Sbjct: 170 VGRFKSRKEREAELGARAREFTNVYIKNFGEDMDDEKLKEIFSKFGNATSVRVMTDESGG 229
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
RGFGFV++E+ E A+KAV NGKE++G+I++VGRAQKK ER ELKRRFE +K +R
Sbjct: 230 GRGFGFVSFENHEDAQKAVDEMNGKELNGRIMFVGRAQKKMERQMELKRRFEQMKQDRTT 289
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLYVKNLDD IDDERLRKEF+PFG+ITSAK
Sbjct: 290 RYQGVNLYVKNLDDGIDDERLRKEFSPFGSITSAK 324
Score = 154 bits (390), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 88/228 (38%), Positives = 132/228 (57%), Gaps = 16/228 (7%)
Query: 77 TERALDTMNFDALKGRPIRI----MWSQRDPSL--RKSGVGNVFIKNLDKSIDNKAMYDT 130
ERA++ MN L R + + +R+ L R NV+IKN + +D++ + +
Sbjct: 151 AERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAREFTNVYIKNFGEDMDDEKLKEI 210
Query: 131 FSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRK 190
FS FG+ S +V DE G +G+GFV FE E A K+++++NG LN +I+FVG+ +
Sbjct: 211 FSKFGNATSVRVMTDESGGGRGFGFVSFENHEDAQKAVDEMNGKELNGRIMFVGRAQKKM 270
Query: 191 EREKELGEKAKLF----------TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDG 240
ER+ EL + + N+Y+KN + +DE+L++ F P+G+ITS +VM G
Sbjct: 271 ERQMELKRRFEQMKQDRTTRYQGVNLYVKNLDDGIDDERLRKEFSPFGSITSAKVMMEGG 330
Query: 241 KSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
+S+GFGFV + SPE A KAV NG+ V K LYV AQ+K ER L
Sbjct: 331 RSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAHL 378
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 128/236 (54%), Gaps = 17/236 (7%)
Query: 102 DPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFET 160
+P + ++++ +L + + +Y+ FS G+I+S +V +D S GY +V+F+
Sbjct: 2 NPGAPSYPIASLYVGDLHQDVTEAMLYEKFSPAGAIVSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 161 EEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKL 220
A ++++ +N ++ + V I +R+ L + N++IKN + +++ L
Sbjct: 62 PADAERALDTMNFDVIKGQPV----RIMWSQRDPSLRKSG--VGNIFIKNLDKSIDNKAL 115
Query: 221 KEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
+ F +G I S +V+ ++ SRG+GFV +E+ + AE+A++ NG ++ + ++VGR +
Sbjct: 116 YDTFSAFGNILSCKVVCDENGSRGYGFVHFETHDAAERAIEKMNGMLLNDRKVFVGRFKS 175
Query: 281 KAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ ER EL R N+Y+KN + +DDE+L++ F+ FG TS +
Sbjct: 176 RKEREAELGARAREF----------TNVYIKNFGEDMDDEKLKEIFSKFGNATSVR 221
>gi|395526571|ref|XP_003765434.1| PREDICTED: polyadenylate-binding protein 4 [Sarcophilus harrisii]
Length = 630
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 195/275 (70%), Positives = 232/275 (84%), Gaps = 4/275 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD +KG+PIRIMWSQRDPSLRKSGVGNVFIKNLDKSI
Sbjct: 53 GYAYVNFQQP--ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFSAFG+ILSCKV DE G SKGY FVHFET++AA+++IEK+NGMLLN + VF
Sbjct: 111 DNKALYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQDAADRAIEKMNGMLLNDRKVF 169
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGK 241
VG+F RKERE ELG KAK FTNVYIKNFG+D +DE+LKE+F YG S +VM ++ GK
Sbjct: 170 VGRFKSRKEREAELGAKAKEFTNVYIKNFGDDMDDERLKELFSKYGKTLSVKVMTDSSGK 229
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
S+GFGFV++E E A KAV+ NGK+++GK+++VGRAQKK ER ELKR+FE LK ER++
Sbjct: 230 SKGFGFVSFEKHEDANKAVEEMNGKDINGKMVFVGRAQKKVERQAELKRKFEQLKQERIS 289
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLY+KNLDD+IDDE+LRKEF+PFG+ITSAK
Sbjct: 290 RYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAK 324
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 85/191 (44%), Positives = 119/191 (62%), Gaps = 10/191 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV+IKN +D++ + + FS +G LS KV D G SKG+GFV FE E ANK++E++
Sbjct: 192 NVYIKNFGDDMDDERLKELFSKYGKTLSVKVMTDSSGKSKGFGFVSFEKHEDANKAVEEM 251
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKLK 221
NG +N K+VFVG+ + ER+ EL K + N+YIKN + +DEKL+
Sbjct: 252 NGKDINGKMVFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLR 311
Query: 222 EMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKK 281
+ F P+G+ITS +VM DG+S+GFGFV + SP+ A KAV NG+ V K LYV AQ+K
Sbjct: 312 KEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPDEATKAVTEMNGRIVGSKPLYVALAQRK 371
Query: 282 AERTQELKRRF 292
ER L ++
Sbjct: 372 EERKAHLTNQY 382
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 123/228 (53%), Gaps = 17/228 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + +Y+ FS G +LS +V +D S GY +V+F+ A +++
Sbjct: 10 MASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERAL 69
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N ++ K + I +R+ L + NV+IKN + +++ L + F +G
Sbjct: 70 DTMNFDVIKGKPI----RIMWSQRDPSLRKSG--VGNVFIKNLDKSIDNKALYDTFSAFG 123
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S +V+ ++ S+G+ FV +E+ + A++A++ NG ++ + ++VGR + + ER EL
Sbjct: 124 NILSCKVVCDENGSKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSRKEREAEL 183
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ + N+Y+KN D +DDERL++ F+ +G S K
Sbjct: 184 GAKAKEF----------TNVYIKNFGDDMDDERLKELFSKYGKTLSVK 221
>gi|395512247|ref|XP_003760354.1| PREDICTED: polyadenylate-binding protein 1 [Sarcophilus harrisii]
Length = 654
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 195/272 (71%), Positives = 231/272 (84%), Gaps = 4/272 (1%)
Query: 66 LVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNK 125
L+ L QP ++ +RALDTMNFD +KG+P+RIMWSQRDPSLRKSGVGN+FIKNLDKSIDNK
Sbjct: 76 LMTLQQP--INRKRALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNK 133
Query: 126 AMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGK 185
A+YDTFSAFG+ILSCKV DE G SKGYGFVHFET+EAA ++IEK+NGMLLN + VFVG+
Sbjct: 134 ALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGR 192
Query: 186 FIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GKSRG 244
F RKERE ELG +AK FTNVYIKNFGED +DE+LKE+F +G S +VM ++ GKS+G
Sbjct: 193 FKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGKSKG 252
Query: 245 FGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQ 304
FGFV++E E A+KAV NGKE++GK +YVGRAQKK ER ELKR+FE +K +R+ RYQ
Sbjct: 253 FGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQ 312
Query: 305 GVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
GVNLYVKNLDD IDDERLRKEF+PFGTITSAK
Sbjct: 313 GVNLYVKNLDDGIDDERLRKEFSPFGTITSAK 344
Score = 157 bits (397), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 92/232 (39%), Positives = 133/232 (57%), Gaps = 16/232 (6%)
Query: 77 TERALDTMNFDALKGRPIRI----MWSQRDPSL--RKSGVGNVFIKNLDKSIDNKAMYDT 130
ERA++ MN L R + + +R+ L R NV+IKN + +D++ + +
Sbjct: 171 AERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKEL 230
Query: 131 FSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRK 190
F FG LS KV DE G SKG+GFV FE E A K+++++NG LN K ++VG+ +
Sbjct: 231 FGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKV 290
Query: 191 EREKELGEKAKLF----------TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDG 240
ER+ EL K + N+Y+KN + +DE+L++ F P+GTITS +VM G
Sbjct: 291 ERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGG 350
Query: 241 KSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRF 292
+S+GFGFV + SPE A KAV NG+ V K LYV AQ+K ER L ++
Sbjct: 351 RSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAHLTNQY 402
>gi|326917956|ref|XP_003205259.1| PREDICTED: polyadenylate-binding protein 1-like [Meleagris
gallopavo]
Length = 652
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 193/261 (73%), Positives = 225/261 (86%), Gaps = 2/261 (0%)
Query: 77 TERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGS 136
TERALDTMNFD +KG+P+RIMWSQRDPSLRKSGVGN+FIKNLDKSIDNKA+YDTFSAFG+
Sbjct: 80 TERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGN 139
Query: 137 ILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKEL 196
ILSCKV DE G SKGYGFVHFET+EAA ++IEK+NGMLLN + VFVG+F RKERE EL
Sbjct: 140 ILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAEL 198
Query: 197 GEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEF 255
G +AK FTNVYIKNFGED +DE+LKE+F +G S +VM ++ GKS+GFGFV++E E
Sbjct: 199 GARAKEFTNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGKSKGFGFVSFERHED 258
Query: 256 AEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDD 315
A+KAV NGKE++GK +YVGRAQKK ER ELKR+FE +K +R+ RYQGVNLYVKNLDD
Sbjct: 259 AQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDD 318
Query: 316 SIDDERLRKEFTPFGTITSAK 336
IDDERLRKEF+PFGTITSAK
Sbjct: 319 GIDDERLRKEFSPFGTITSAK 339
Score = 157 bits (398), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 92/232 (39%), Positives = 133/232 (57%), Gaps = 16/232 (6%)
Query: 77 TERALDTMNFDALKGRPIRI----MWSQRDPSL--RKSGVGNVFIKNLDKSIDNKAMYDT 130
ERA++ MN L R + + +R+ L R NV+IKN + +D++ + +
Sbjct: 166 AERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKEL 225
Query: 131 FSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRK 190
F FG LS KV DE G SKG+GFV FE E A K+++++NG LN K ++VG+ +
Sbjct: 226 FGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKV 285
Query: 191 EREKELGEKAKLF----------TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDG 240
ER+ EL K + N+Y+KN + +DE+L++ F P+GTITS +VM G
Sbjct: 286 ERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGG 345
Query: 241 KSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRF 292
+S+GFGFV + SPE A KAV NG+ V K LYV AQ+K ER L ++
Sbjct: 346 RSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAHLTNQY 397
>gi|149023878|gb|EDL80375.1| rCG31475, isoform CRA_a [Rattus norvegicus]
Length = 660
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 198/275 (72%), Positives = 228/275 (82%), Gaps = 4/275 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD +KG+PIRIMWSQRDPSLRKSGVGNVFIKNLDKSI
Sbjct: 53 GYAYVNFQQP--ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFSAFG+ILSCKV DE G SKGY FVHFET+EAANK+IEK+NGMLLN + VF
Sbjct: 111 DNKALYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQEAANKAIEKMNGMLLNDRKVF 169
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGK 241
VG+F RKERE ELG KAK FTNVYIKNFGE+ +DE L+E+F +G S +VM + GK
Sbjct: 170 VGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDENLRELFSQFGKTLSVKVMRDCSGK 229
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
S+GFGFV+YE E A KAV+ NGKE+ GK ++VGRAQKK ER ELKR+FE LK ER++
Sbjct: 230 SKGFGFVSYEKHEDANKAVEEMNGKEMSGKSIFVGRAQKKVERQAELKRKFEQLKQERIS 289
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLY+KNLDD+IDDE+LRKEF+PFG+ITSAK
Sbjct: 290 RYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAK 324
Score = 160 bits (406), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 84/191 (43%), Positives = 120/191 (62%), Gaps = 10/191 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV+IKN + +D++ + + FS FG LS KV +D G SKG+GFV +E E ANK++E++
Sbjct: 192 NVYIKNFGEEVDDENLRELFSQFGKTLSVKVMRDCSGKSKGFGFVSYEKHEDANKAVEEM 251
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKLK 221
NG ++ K +FVG+ + ER+ EL K + N+YIKN + +DEKL+
Sbjct: 252 NGKEMSGKSIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLR 311
Query: 222 EMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKK 281
+ F P+G+ITS +VM DG+S+GFGFV + SPE A KAV NG+ V K LYV AQ+K
Sbjct: 312 KEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRK 371
Query: 282 AERTQELKRRF 292
ER L ++
Sbjct: 372 EERKAHLTNQY 382
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 121/228 (53%), Gaps = 17/228 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + +Y+ FS G +LS +V +D S GY +V+F+ A +++
Sbjct: 10 MASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERAL 69
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N ++ K + I +R+ L + NV+IKN + +++ L + F +G
Sbjct: 70 DTMNFDVIKGKPI----RIMWSQRDPSLRKSG--VGNVFIKNLDKSIDNKALYDTFSAFG 123
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S +V+ ++ S+G+ FV +E+ E A KA++ NG ++ + ++VGR + + ER EL
Sbjct: 124 NILSCKVVCDENGSKGYAFVHFETQEAANKAIEKMNGMLLNDRKVFVGRFKSRKEREAEL 183
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ + N+Y+KN + +DDE LR+ F+ FG S K
Sbjct: 184 GAKAKEF----------TNVYIKNFGEEVDDENLRELFSQFGKTLSVK 221
>gi|149023879|gb|EDL80376.1| rCG31475, isoform CRA_b [Rattus norvegicus]
Length = 656
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 198/275 (72%), Positives = 228/275 (82%), Gaps = 4/275 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD +KG+PIRIMWSQRDPSLRKSGVGNVFIKNLDKSI
Sbjct: 53 GYAYVNFQQP--ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFSAFG+ILSCKV DE G SKGY FVHFET+EAANK+IEK+NGMLLN + VF
Sbjct: 111 DNKALYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQEAANKAIEKMNGMLLNDRKVF 169
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGK 241
VG+F RKERE ELG KAK FTNVYIKNFGE+ +DE L+E+F +G S +VM + GK
Sbjct: 170 VGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDENLRELFSQFGKTLSVKVMRDCSGK 229
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
S+GFGFV+YE E A KAV+ NGKE+ GK ++VGRAQKK ER ELKR+FE LK ER++
Sbjct: 230 SKGFGFVSYEKHEDANKAVEEMNGKEMSGKSIFVGRAQKKVERQAELKRKFEQLKQERIS 289
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLY+KNLDD+IDDE+LRKEF+PFG+ITSAK
Sbjct: 290 RYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAK 324
Score = 160 bits (406), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 84/191 (43%), Positives = 120/191 (62%), Gaps = 10/191 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV+IKN + +D++ + + FS FG LS KV +D G SKG+GFV +E E ANK++E++
Sbjct: 192 NVYIKNFGEEVDDENLRELFSQFGKTLSVKVMRDCSGKSKGFGFVSYEKHEDANKAVEEM 251
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKLK 221
NG ++ K +FVG+ + ER+ EL K + N+YIKN + +DEKL+
Sbjct: 252 NGKEMSGKSIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLR 311
Query: 222 EMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKK 281
+ F P+G+ITS +VM DG+S+GFGFV + SPE A KAV NG+ V K LYV AQ+K
Sbjct: 312 KEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRK 371
Query: 282 AERTQELKRRF 292
ER L ++
Sbjct: 372 EERKAHLTNQY 382
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 121/228 (53%), Gaps = 17/228 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + +Y+ FS G +LS +V +D S GY +V+F+ A +++
Sbjct: 10 MASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERAL 69
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N ++ K + I +R+ L + NV+IKN + +++ L + F +G
Sbjct: 70 DTMNFDVIKGKPI----RIMWSQRDPSLRKSG--VGNVFIKNLDKSIDNKALYDTFSAFG 123
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S +V+ ++ S+G+ FV +E+ E A KA++ NG ++ + ++VGR + + ER EL
Sbjct: 124 NILSCKVVCDENGSKGYAFVHFETQEAANKAIEKMNGMLLNDRKVFVGRFKSRKEREAEL 183
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ + N+Y+KN + +DDE LR+ F+ FG S K
Sbjct: 184 GAKAKEF----------TNVYIKNFGEEVDDENLRELFSQFGKTLSVK 221
>gi|291399204|ref|XP_002715240.1| PREDICTED: poly A binding protein, cytoplasmic 4-like [Oryctolagus
cuniculus]
Length = 644
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 197/275 (71%), Positives = 229/275 (83%), Gaps = 4/275 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD +KG+PIRIMWSQRDPSLRKSGVGNVFIKNLDKSI
Sbjct: 53 GYAYVNFQQP--ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFSAFG+ILSCKV DE G SKGY FVHFET+EAA+K+IEK+NGMLLN + VF
Sbjct: 111 DNKALYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVF 169
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGK 241
VG+F RKERE ELG KAK FTNVYIKNFGE+ +DE LK++F +G S +VM + GK
Sbjct: 170 VGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKDLFSQFGKTLSVKVMRDPSGK 229
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
S+GFGFV+YE E A KAV+ NGKE+ GK+++VGRAQKK ER ELKR+FE LK ER++
Sbjct: 230 SKGFGFVSYEKHEDANKAVEEMNGKEIGGKVIFVGRAQKKVERQAELKRKFEQLKQERIS 289
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLY+KNLDD+IDDE+LRKEF+PFG+ITSAK
Sbjct: 290 RYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAK 324
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 85/191 (44%), Positives = 121/191 (63%), Gaps = 10/191 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV+IKN + +D++++ D FS FG LS KV +D G SKG+GFV +E E ANK++E++
Sbjct: 192 NVYIKNFGEEVDDESLKDLFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEM 251
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKLK 221
NG + K++FVG+ + ER+ EL K + N+YIKN + +DEKL+
Sbjct: 252 NGKEIGGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLR 311
Query: 222 EMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKK 281
+ F P+G+ITS +VM DG+S+GFGFV + SPE A KAV NG+ V K LYV AQ+K
Sbjct: 312 KEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRK 371
Query: 282 AERTQELKRRF 292
ER L ++
Sbjct: 372 EERKAHLTNQY 382
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 121/228 (53%), Gaps = 17/228 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + +Y+ FS G +LS +V +D S GY +V+F+ A +++
Sbjct: 10 MASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERAL 69
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N ++ K + I +R+ L + NV+IKN + +++ L + F +G
Sbjct: 70 DTMNFDVIKGKPI----RIMWSQRDPSLRKSG--VGNVFIKNLDKSIDNKALYDTFSAFG 123
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S +V+ ++ S+G+ FV +E+ E A+KA++ NG ++ + ++VGR + + ER EL
Sbjct: 124 NILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAEL 183
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ + N+Y+KN + +DDE L+ F+ FG S K
Sbjct: 184 GAKAKEF----------TNVYIKNFGEEVDDESLKDLFSQFGKTLSVK 221
>gi|327285428|ref|XP_003227435.1| PREDICTED: polyadenylate-binding protein 4-like [Anolis
carolinensis]
Length = 616
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 195/271 (71%), Positives = 230/271 (84%), Gaps = 4/271 (1%)
Query: 67 VQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKA 126
V QP D ERALDTMNFD +KG+PIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKA
Sbjct: 44 VNFQQP--ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKA 101
Query: 127 MYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKF 186
+YDTFSAFG+ILSCKV DE G SKGY FVHFET++AA+++IEK+NGMLLN + VFVG+F
Sbjct: 102 LYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRF 160
Query: 187 IPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GKSRGF 245
RKERE ELG KAK FTNVYIKNFG+D +DE+LKE+F YG S +VM + GKS+GF
Sbjct: 161 KSRKEREAELGAKAKEFTNVYIKNFGDDMDDERLKELFGKYGKTLSVKVMTDPTGKSKGF 220
Query: 246 GFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQG 305
GFV++E E A KAV+ NGK+++GK+++VGRAQKK ER ELKRRFE LK ER++RYQG
Sbjct: 221 GFVSFEKHEEANKAVEEMNGKDINGKMVFVGRAQKKVERQAELKRRFEQLKQERISRYQG 280
Query: 306 VNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
VNLY+KNLDD+IDDE+LRKEF+PFG+ITSAK
Sbjct: 281 VNLYIKNLDDTIDDEKLRKEFSPFGSITSAK 311
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 83/191 (43%), Positives = 118/191 (61%), Gaps = 10/191 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV+IKN +D++ + + F +G LS KV D G SKG+GFV FE E ANK++E++
Sbjct: 179 NVYIKNFGDDMDDERLKELFGKYGKTLSVKVMTDPTGKSKGFGFVSFEKHEEANKAVEEM 238
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKLK 221
NG +N K+VFVG+ + ER+ EL + + N+YIKN + +DEKL+
Sbjct: 239 NGKDINGKMVFVGRAQKKVERQAELKRRFEQLKQERISRYQGVNLYIKNLDDTIDDEKLR 298
Query: 222 EMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKK 281
+ F P+G+ITS +VM +G+S+GFGFV + SPE A KAV NG+ V K LYV AQ+K
Sbjct: 299 KEFSPFGSITSAKVMLEEGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRK 358
Query: 282 AERTQELKRRF 292
ER L ++
Sbjct: 359 EERKAHLTNQY 369
>gi|38541222|gb|AAH62832.1| Pabpc1a protein, partial [Danio rerio]
Length = 327
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 199/275 (72%), Positives = 228/275 (82%), Gaps = 4/275 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD +KGRP+RIMWSQRDPSLRKSGVGN+FIKNLDKSI
Sbjct: 53 GYAYVNFQQP--ADAERALDTMNFDVIKGRPVRIMWSQRDPSLRKSGVGNIFIKNLDKSI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFSAFG+ILSCKV DE G SKGYGFVHFET EAA ++IEK+NGMLLN + VF
Sbjct: 111 DNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETHEAAERAIEKMNGMLLNDRKVF 169
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GK 241
VG+F RKERE E+G +AK FTNVYIKNFGED +DEKLKE+F YG S RVM +D GK
Sbjct: 170 VGRFKSRKEREAEMGARAKEFTNVYIKNFGEDMDDEKLKEIFCKYGPALSIRVMTDDSGK 229
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
S+GFGFV++E E A++AV NGKE++GK +YVGRAQKK ER ELKR+FE +K +R+
Sbjct: 230 SKGFGFVSFERHEDAQRAVDEMNGKEMNGKQVYVGRAQKKGERQTELKRKFEQMKQDRMT 289
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLYVKNLDD +DDERLRKEF+PFGTITSAK
Sbjct: 290 RYQGVNLYVKNLDDGLDDERLRKEFSPFGTITSAK 324
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 127/236 (53%), Gaps = 17/236 (7%)
Query: 102 DPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQG-NSKGYGFVHFET 160
+PS + ++++ +L + +Y+ FS G ILS +V +D S GY +V+F+
Sbjct: 2 NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMMTRRSLGYAYVNFQQ 61
Query: 161 EEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKL 220
A ++++ +N ++ + V I +R+ L + N++IKN + +++ L
Sbjct: 62 PADAERALDTMNFDVIKGRPV----RIMWSQRDPSLRKSG--VGNIFIKNLDKSIDNKAL 115
Query: 221 KEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
+ F +G I S +V+ ++ S+G+GFV +E+ E AE+A++ NG ++ + ++VGR +
Sbjct: 116 YDTFSAFGNILSCKVVCDENGSKGYGFVHFETHEAAERAIEKMNGMLLNDRKVFVGRFKS 175
Query: 281 KAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ ER E+ R + + N+Y+KN + +DDE+L++ F +G S +
Sbjct: 176 RKEREAEMGARAK----------EFTNVYIKNFGEDMDDEKLKEIFCKYGPALSIR 221
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 99/176 (56%), Gaps = 16/176 (9%)
Query: 77 TERALDTMNFDALKGRPIRI----MWSQRDPSL--RKSGVGNVFIKNLDKSIDNKAMYDT 130
ERA++ MN L R + + +R+ + R NV+IKN + +D++ + +
Sbjct: 151 AERAIEKMNGMLLNDRKVFVGRFKSRKEREAEMGARAKEFTNVYIKNFGEDMDDEKLKEI 210
Query: 131 FSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRK 190
F +G LS +V D+ G SKG+GFV FE E A ++++++NG +N K V+VG+ +
Sbjct: 211 FCKYGPALSIRVMTDDSGKSKGFGFVSFERHEDAQRAVDEMNGKEMNGKQVYVGRAQKKG 270
Query: 191 EREKELGEKAKLF----------TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM 236
ER+ EL K + N+Y+KN + +DE+L++ F P+GTITS +VM
Sbjct: 271 ERQTELKRKFEQMKQDRMTRYQGVNLYVKNLDDGLDDERLRKEFSPFGTITSAKVM 326
>gi|380793569|gb|AFE68660.1| polyadenylate-binding protein 4 isoform 3, partial [Macaca mulatta]
Length = 485
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 199/275 (72%), Positives = 229/275 (83%), Gaps = 4/275 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD +KG+PIRIMWSQRDPSLRKSGVGNVFIKNLDKSI
Sbjct: 53 GYAYVNFQQP--ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFSAFG+ILSCKV DE G SKGY FVHFET+EAA+K+IEK+NGMLLN + VF
Sbjct: 111 DNKALYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVF 169
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGK 241
VG+F RKERE ELG KAK FTNVYIKNFGE+ +DE LKE+F +G S +VM + GK
Sbjct: 170 VGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGK 229
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
S+GFGFV+YE E A KAV+ NGKE+ GKI++VGRAQKK ER ELKR+FE LK ER++
Sbjct: 230 SKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERIS 289
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLY+KNLDD+IDDE+LRKEF+PFG+ITSAK
Sbjct: 290 RYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAK 324
Score = 164 bits (414), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 85/191 (44%), Positives = 122/191 (63%), Gaps = 10/191 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV+IKN + +D++++ + FS FG LS KV +D G SKG+GFV +E E ANK++E++
Sbjct: 192 NVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEM 251
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKLK 221
NG ++ KI+FVG+ + ER+ EL K + N+YIKN + +DEKL+
Sbjct: 252 NGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLR 311
Query: 222 EMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKK 281
+ F P+G+ITS +VM DG+S+GFGFV + SPE A KAV NG+ V K LYV AQ+K
Sbjct: 312 KEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRK 371
Query: 282 AERTQELKRRF 292
ER L ++
Sbjct: 372 EERKAHLTNQY 382
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 122/228 (53%), Gaps = 17/228 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + +Y+ FS G +LS +V +D S GY +V+F+ A +++
Sbjct: 10 MASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERAL 69
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N ++ K + I +R+ L + NV+IKN + +++ L + F +G
Sbjct: 70 DTMNFDVIKGKPI----RIMWSQRDPSLRKSG--VGNVFIKNLDKSIDNKALYDTFSAFG 123
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S +V+ ++ S+G+ FV +E+ E A+KA++ NG ++ + ++VGR + + ER EL
Sbjct: 124 NILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAEL 183
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ + N+Y+KN + +DDE L++ F+ FG S K
Sbjct: 184 GAKAKEF----------TNVYIKNFGEEVDDESLKELFSQFGKTLSVK 221
>gi|193787802|dbj|BAG53005.1| unnamed protein product [Homo sapiens]
Length = 636
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 195/275 (70%), Positives = 229/275 (83%), Gaps = 4/275 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD +KG+P+RIMWSQRDPSLRKSGVGN+FIKNLDKSI
Sbjct: 53 GYAYVNFQQP--ADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFSAFG+ILSCKV DE G SKGYGFVHFET+EAA ++IEK+NGMLLN + VF
Sbjct: 111 DNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVF 169
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GK 241
VG+F RKERE ELG +AK FTNVYIKNFGED +DE+LK++F +G S +VM ++ GK
Sbjct: 170 VGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGAALSVKVMTDESGK 229
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
S+GFGFV++E E A+KAV NGKE++GK +YVGRAQKK ER ELKR+FE +K +R+
Sbjct: 230 SKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRIT 289
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLYVKNLDD I+DERLRKEF+PFGTITSAK
Sbjct: 290 RYQGVNLYVKNLDDGINDERLRKEFSPFGTITSAK 324
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 94/232 (40%), Positives = 134/232 (57%), Gaps = 16/232 (6%)
Query: 77 TERALDTMNFDALKGRPIRI----MWSQRDPSL--RKSGVGNVFIKNLDKSIDNKAMYDT 130
ERA++ MN L R + + +R+ L R NV+IKN + +D++ + D
Sbjct: 151 AERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDL 210
Query: 131 FSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRK 190
F FG+ LS KV DE G SKG+GFV FE E A K+++++NG LN K ++VG+ +
Sbjct: 211 FGKFGAALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKV 270
Query: 191 EREKELGEKAKLF----------TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDG 240
ER+ EL K + N+Y+KN + NDE+L++ F P+GTITS +VM G
Sbjct: 271 ERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGINDERLRKEFSPFGTITSAKVMMEGG 330
Query: 241 KSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRF 292
+S+GFGFV + SPE A KAV NG+ V K LYV AQ+K ER L ++
Sbjct: 331 RSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAHLTNQY 382
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 125/236 (52%), Gaps = 17/236 (7%)
Query: 102 DPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFET 160
+PS + ++++ +L + +Y+ FS G ILS +V +D S GY +V+F+
Sbjct: 2 NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 161 EEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKL 220
A ++++ +N ++ K V + +R+ L + N++IKN + +++ L
Sbjct: 62 PADAERALDTMNFDVIKGKPVRIM----WSQRDPSLRKSG--VGNIFIKNLDKSIDNKAL 115
Query: 221 KEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
+ F +G I S +V+ ++ S+G+GFV +E+ E AE+A++ NG ++ + ++VGR +
Sbjct: 116 YDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKS 175
Query: 281 KAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ ER EL R + N+Y+KN + +DDERL+ F FG S K
Sbjct: 176 RKEREAELGARAKEF----------TNVYIKNFGEDMDDERLKDLFGKFGAALSVK 221
>gi|198386356|ref|NP_001094008.1| polyadenylate-binding protein 4 [Rattus norvegicus]
gi|183985833|gb|AAI66452.1| Pabpc4 protein [Rattus norvegicus]
Length = 644
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 198/275 (72%), Positives = 228/275 (82%), Gaps = 4/275 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD +KG+PIRIMWSQRDPSLRKSGVGNVFIKNLDKSI
Sbjct: 53 GYAYVNFQQP--ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFSAFG+ILSCKV DE G SKGY FVHFET+EAANK+IEK+NGMLLN + VF
Sbjct: 111 DNKALYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQEAANKAIEKMNGMLLNDRKVF 169
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGK 241
VG+F RKERE ELG KAK FTNVYIKNFGE+ +DE L+E+F +G S +VM + GK
Sbjct: 170 VGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDENLRELFSQFGKTLSVKVMRDCSGK 229
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
S+GFGFV+YE E A KAV+ NGKE+ GK ++VGRAQKK ER ELKR+FE LK ER++
Sbjct: 230 SKGFGFVSYEKHEDANKAVEEMNGKEMSGKSIFVGRAQKKVERQAELKRKFEQLKQERIS 289
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLY+KNLDD+IDDE+LRKEF+PFG+ITSAK
Sbjct: 290 RYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAK 324
Score = 160 bits (405), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 84/191 (43%), Positives = 120/191 (62%), Gaps = 10/191 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV+IKN + +D++ + + FS FG LS KV +D G SKG+GFV +E E ANK++E++
Sbjct: 192 NVYIKNFGEEVDDENLRELFSQFGKTLSVKVMRDCSGKSKGFGFVSYEKHEDANKAVEEM 251
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKLK 221
NG ++ K +FVG+ + ER+ EL K + N+YIKN + +DEKL+
Sbjct: 252 NGKEMSGKSIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLR 311
Query: 222 EMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKK 281
+ F P+G+ITS +VM DG+S+GFGFV + SPE A KAV NG+ V K LYV AQ+K
Sbjct: 312 KEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRK 371
Query: 282 AERTQELKRRF 292
ER L ++
Sbjct: 372 EERKAHLTNQY 382
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 121/228 (53%), Gaps = 17/228 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + +Y+ FS G +LS +V +D S GY +V+F+ A +++
Sbjct: 10 MASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERAL 69
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N ++ K + I +R+ L + NV+IKN + +++ L + F +G
Sbjct: 70 DTMNFDVIKGKPI----RIMWSQRDPSLRKSG--VGNVFIKNLDKSIDNKALYDTFSAFG 123
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S +V+ ++ S+G+ FV +E+ E A KA++ NG ++ + ++VGR + + ER EL
Sbjct: 124 NILSCKVVCDENGSKGYAFVHFETQEAANKAIEKMNGMLLNDRKVFVGRFKSRKEREAEL 183
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ + N+Y+KN + +DDE LR+ F+ FG S K
Sbjct: 184 GAKAKEF----------TNVYIKNFGEEVDDENLRELFSQFGKTLSVK 221
>gi|410987610|ref|XP_004000091.1| PREDICTED: polyadenylate-binding protein 1 [Felis catus]
Length = 672
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 192/262 (73%), Positives = 225/262 (85%), Gaps = 2/262 (0%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D ERALDTMNFD +KG+P+RIMWSQRDPSLRKSGVGN+FIKNLDKSIDNKA+YDTFSAFG
Sbjct: 100 DAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFG 159
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCKV DE G SKGYGFVHFET+EAA ++IEK+NGMLLN + VFVG+F RKERE E
Sbjct: 160 NILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAE 218
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPE 254
LG +AK FTNVYIKNFGED +DE+LK++F +G S +VM ++ GKS+GFGFV++E E
Sbjct: 219 LGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHE 278
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A+KAV NGKE++GK +YVGRAQKK ER ELKR+FE +K +R+ RYQGVNLYVKNLD
Sbjct: 279 DAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLD 338
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
D IDDERLRKEF+PFGTITSAK
Sbjct: 339 DGIDDERLRKEFSPFGTITSAK 360
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 93/232 (40%), Positives = 133/232 (57%), Gaps = 16/232 (6%)
Query: 77 TERALDTMNFDALKGRPIRI----MWSQRDPSL--RKSGVGNVFIKNLDKSIDNKAMYDT 130
ERA++ MN L R + + +R+ L R NV+IKN + +D++ + D
Sbjct: 187 AERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDL 246
Query: 131 FSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRK 190
F FG LS KV DE G SKG+GFV FE E A K+++++NG LN K ++VG+ +
Sbjct: 247 FGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKV 306
Query: 191 EREKELGEKAKLF----------TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDG 240
ER+ EL K + N+Y+KN + +DE+L++ F P+GTITS +VM G
Sbjct: 307 ERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGG 366
Query: 241 KSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRF 292
+S+GFGFV + SPE A KAV NG+ V K LYV AQ+K ER L ++
Sbjct: 367 RSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAHLTNQY 418
>gi|397502367|ref|XP_003821832.1| PREDICTED: polyadenylate-binding protein 1 [Pan paniscus]
Length = 656
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 192/266 (72%), Positives = 227/266 (85%), Gaps = 2/266 (0%)
Query: 72 PYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTF 131
P + +ERALDTMNFD +KG+P+RIMWSQRDPSLRKSGVGN+FIKNLDKSIDNKA+YDTF
Sbjct: 80 PRVEPSERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTF 139
Query: 132 SAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKE 191
SAFG+ILSCKV DE G SKGYGFVHFET+EAA ++IEK+NGMLLN + VFVG+F RKE
Sbjct: 140 SAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKE 198
Query: 192 REKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GKSRGFGFVAY 250
RE ELG +AK FTNVYIKNFGED +DE+LK++F +G S +VM ++ GKS+GFGFV++
Sbjct: 199 REAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSF 258
Query: 251 ESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYV 310
E E A+KAV NGKE++GK +YVGRAQKK ER ELKR+FE +K +R+ RYQGVNLYV
Sbjct: 259 ERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYV 318
Query: 311 KNLDDSIDDERLRKEFTPFGTITSAK 336
KNLDD IDDERLRKEF+PFGTITSAK
Sbjct: 319 KNLDDGIDDERLRKEFSPFGTITSAK 344
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 93/232 (40%), Positives = 133/232 (57%), Gaps = 16/232 (6%)
Query: 77 TERALDTMNFDALKGRPIRI----MWSQRDPSL--RKSGVGNVFIKNLDKSIDNKAMYDT 130
ERA++ MN L R + + +R+ L R NV+IKN + +D++ + D
Sbjct: 171 AERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDL 230
Query: 131 FSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRK 190
F FG LS KV DE G SKG+GFV FE E A K+++++NG LN K ++VG+ +
Sbjct: 231 FGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKV 290
Query: 191 EREKELGEKAKLF----------TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDG 240
ER+ EL K + N+Y+KN + +DE+L++ F P+GTITS +VM G
Sbjct: 291 ERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGG 350
Query: 241 KSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRF 292
+S+GFGFV + SPE A KAV NG+ V K LYV AQ+K ER L ++
Sbjct: 351 RSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAHLTNQY 402
Score = 42.7 bits (99), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 64/145 (44%), Gaps = 16/145 (11%)
Query: 203 FTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQA 262
++Y+ + D + L E F P G I S RV + + PE A Q
Sbjct: 10 MASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDXXXXXXXRWRRSHHPELL-PAPQP 68
Query: 263 WNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN----------RYQGV-NLYVK 311
G+EV + R + +ER + F+++K + + R GV N+++K
Sbjct: 69 --GEEVQFCARKIPRVE-PSERALDTM-NFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIK 124
Query: 312 NLDDSIDDERLRKEFTPFGTITSAK 336
NLD SID++ L F+ FG I S K
Sbjct: 125 NLDKSIDNKALYDTFSAFGNILSCK 149
>gi|291408594|ref|XP_002720593.1| PREDICTED: polyadenylate-binding protein 1-like isoform 1
[Oryctolagus cuniculus]
Length = 636
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 195/275 (70%), Positives = 228/275 (82%), Gaps = 4/275 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD +KG+P+RIMWSQRDPSL KSGVGN+FIKNLDKSI
Sbjct: 53 GYAYVNFQQP--ADAERALDTMNFDVIKGKPVRIMWSQRDPSLHKSGVGNIFIKNLDKSI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFSAFG+ILSCKV DE G SKGYGFVHFET+EAA ++IEK+NGMLLN + VF
Sbjct: 111 DNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVF 169
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GK 241
VG+F RKERE ELG +AK FTNVYIKNFGED +DE+LK++F +G S +VM ++ GK
Sbjct: 170 VGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGK 229
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
S+GFGFV++E E A+KAV NGKE++GK +YVGRAQKK ER ELKR+FE +K +R+
Sbjct: 230 SKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRIT 289
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLYVKNLDD IDDERLRKEF+PFGTITSAK
Sbjct: 290 RYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAK 324
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 93/232 (40%), Positives = 133/232 (57%), Gaps = 16/232 (6%)
Query: 77 TERALDTMNFDALKGRPIRI----MWSQRDPSL--RKSGVGNVFIKNLDKSIDNKAMYDT 130
ERA++ MN L R + + +R+ L R NV+IKN + +D++ + D
Sbjct: 151 AERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDL 210
Query: 131 FSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRK 190
F FG LS KV DE G SKG+GFV FE E A K+++++NG LN K ++VG+ +
Sbjct: 211 FGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKV 270
Query: 191 EREKELGEKAKLF----------TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDG 240
ER+ EL K + N+Y+KN + +DE+L++ F P+GTITS +VM G
Sbjct: 271 ERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGG 330
Query: 241 KSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRF 292
+S+GFGFV + SPE A KAV NG+ V K LYV AQ+K ER L ++
Sbjct: 331 RSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAHLTNQY 382
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 125/236 (52%), Gaps = 17/236 (7%)
Query: 102 DPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFET 160
+PS + ++++ +L + +Y+ FS G ILS +V +D S GY +V+F+
Sbjct: 2 NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 161 EEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKL 220
A ++++ +N ++ K V + +R+ L + N++IKN + +++ L
Sbjct: 62 PADAERALDTMNFDVIKGKPVRIM----WSQRDPSLHKSG--VGNIFIKNLDKSIDNKAL 115
Query: 221 KEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
+ F +G I S +V+ ++ S+G+GFV +E+ E AE+A++ NG ++ + ++VGR +
Sbjct: 116 YDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKS 175
Query: 281 KAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ ER EL R + N+Y+KN + +DDERL+ F FG S K
Sbjct: 176 RKEREAELGARAKEF----------TNVYIKNFGEDMDDERLKDLFGKFGPALSVK 221
>gi|149608633|ref|XP_001515603.1| PREDICTED: polyadenylate-binding protein 4 [Ornithorhynchus
anatinus]
Length = 630
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 194/275 (70%), Positives = 231/275 (84%), Gaps = 4/275 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD +KG+PIRIMWSQRDPSLRKSGVGNVFIKNLDKSI
Sbjct: 53 GYAYVNFQQP--ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFSAFG+ILSCKV DE G SKGY FVHFET++AA+++IEK+NGMLLN + VF
Sbjct: 111 DNKALYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQDAADRAIEKMNGMLLNDRKVF 169
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGK 241
VG+F RKERE ELG KAK FTNVYIKNFG+D +DE+LKE+F YG S +VM + GK
Sbjct: 170 VGRFKSRKEREAELGAKAKEFTNVYIKNFGDDMDDERLKELFSKYGKTLSVKVMTDPSGK 229
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
S+GFGFV++E E A +AV+ NGK+++GK+++VGRAQKK ER ELKR+FE LK ER++
Sbjct: 230 SKGFGFVSFEKHEDANQAVEDMNGKDINGKMVFVGRAQKKVERQAELKRKFEQLKQERIS 289
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLY+KNLDD+IDDE+LRKEF+PFG+ITSAK
Sbjct: 290 RYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAK 324
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 84/191 (43%), Positives = 118/191 (61%), Gaps = 10/191 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV+IKN +D++ + + FS +G LS KV D G SKG+GFV FE E AN+++E +
Sbjct: 192 NVYIKNFGDDMDDERLKELFSKYGKTLSVKVMTDPSGKSKGFGFVSFEKHEDANQAVEDM 251
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKLK 221
NG +N K+VFVG+ + ER+ EL K + N+YIKN + +DEKL+
Sbjct: 252 NGKDINGKMVFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLR 311
Query: 222 EMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKK 281
+ F P+G+ITS +VM +G+S+GFGFV + SPE A KAV NG+ V K LYV AQ+K
Sbjct: 312 KEFSPFGSITSAKVMLEEGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRK 371
Query: 282 AERTQELKRRF 292
ER L ++
Sbjct: 372 EERKAHLTNQY 382
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 123/228 (53%), Gaps = 17/228 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + +Y+ FS G +LS +V +D S GY +V+F+ A +++
Sbjct: 10 MASLYVGDLHPDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERAL 69
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N ++ K + I +R+ L + NV+IKN + +++ L + F +G
Sbjct: 70 DTMNFDVIKGKPI----RIMWSQRDPSLRKSG--VGNVFIKNLDKSIDNKALYDTFSAFG 123
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S +V+ ++ S+G+ FV +E+ + A++A++ NG ++ + ++VGR + + ER EL
Sbjct: 124 NILSCKVVCDENGSKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSRKEREAEL 183
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ + N+Y+KN D +DDERL++ F+ +G S K
Sbjct: 184 GAKAKEF----------TNVYIKNFGDDMDDERLKELFSKYGKTLSVK 221
>gi|351695842|gb|EHA98760.1| Polyadenylate-binding protein 1 [Heterocephalus glaber]
Length = 709
Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust.
Identities = 192/266 (72%), Positives = 226/266 (84%), Gaps = 2/266 (0%)
Query: 72 PYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTF 131
P+ ERALDTMNFD +KG+P+RIMWSQRDPSLRKSGVGN+FIKNLDKSIDNKA+YDTF
Sbjct: 150 PWESRAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTF 209
Query: 132 SAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKE 191
SAFG+ILSCKV DE G SKGYGFVHFET+EAA ++IEK+NGMLLN + VFVG+F RKE
Sbjct: 210 SAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKE 268
Query: 192 REKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GKSRGFGFVAY 250
RE ELG +AK FTNVYIKNFGED +DE+LK++F +G S +VM ++ GKS+GFGFV++
Sbjct: 269 REAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSF 328
Query: 251 ESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYV 310
E E A+KAV NGKE++GK +YVGRAQKK ER ELKR+FE +K +R+ RYQGVNLYV
Sbjct: 329 ERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYV 388
Query: 311 KNLDDSIDDERLRKEFTPFGTITSAK 336
KNLDD IDDERLRKEF+PFGTITSAK
Sbjct: 389 KNLDDGIDDERLRKEFSPFGTITSAK 414
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 82/232 (35%), Positives = 120/232 (51%), Gaps = 33/232 (14%)
Query: 77 TERALDTMNFDALKGRPIRI----MWSQRDPSL--RKSGVGNVFIKNLDKSIDNKAMYDT 130
ERA++ MN L R + + +R+ L R NV+IKN + +D++ + D
Sbjct: 241 AERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDL 300
Query: 131 FSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRK 190
F FG LS KV DE G SKG+GFV FE E A K+++++NG LN K ++VG+ +
Sbjct: 301 FGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKV 360
Query: 191 EREKELGEKAKLF----------TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDG 240
ER+ EL K + N+Y+KN + +DE+L++ F P+GTITS +
Sbjct: 361 ERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAK------ 414
Query: 241 KSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRF 292
+ E A KAV NG+ V K LYV AQ+K ER L ++
Sbjct: 415 -----------NSEEATKAVTEMNGRIVATKPLYVALAQRKEERQAHLTNQY 455
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 70/154 (45%), Gaps = 43/154 (27%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQR-----------------DPSLRKSGVGNVFIKNL 118
D ++A+D MN L G+ I + +Q+ D R GV N+++KNL
Sbjct: 333 DAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGV-NLYVKNL 391
Query: 119 DKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNS 178
D ID++ + FS FG+I S K NS E A K++ ++NG ++ +
Sbjct: 392 DDGIDDERLRKEFSPFGTITSAK-------NS-----------EEATKAVTEMNGRIVAT 433
Query: 179 KIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFG 212
K ++V ++ER+ L TN Y++
Sbjct: 434 KPLYVALAQRKEERQAHL-------TNQYMQRMA 460
>gi|449284083|gb|EMC90664.1| Polyadenylate-binding protein 1, partial [Columba livia]
Length = 573
Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust.
Identities = 192/261 (73%), Positives = 224/261 (85%), Gaps = 2/261 (0%)
Query: 77 TERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGS 136
ERALDTMNFD +KG+P+RIMWSQRDPSLRKSGVGN+FIKNLDKSIDNKA+YDTFSAFG+
Sbjct: 1 AERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGN 60
Query: 137 ILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKEL 196
ILSCKV DE G SKGYGFVHFET+EAA ++IEK+NGMLLN + VFVG+F RKERE EL
Sbjct: 61 ILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAEL 119
Query: 197 GEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEF 255
G +AK FTNVYIKNFGED +DE+LKE+F +G S +VM ++ GKS+GFGFV++E E
Sbjct: 120 GARAKEFTNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESGKSKGFGFVSFERHED 179
Query: 256 AEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDD 315
A+KAV NGKE++GK +YVGRAQKK ER ELKR+FE +K +R+ RYQGVNLYVKNLDD
Sbjct: 180 AQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDD 239
Query: 316 SIDDERLRKEFTPFGTITSAK 336
IDDERLRKEF+PFGTITSAK
Sbjct: 240 GIDDERLRKEFSPFGTITSAK 260
Score = 157 bits (398), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 92/232 (39%), Positives = 133/232 (57%), Gaps = 16/232 (6%)
Query: 77 TERALDTMNFDALKGRPIRI----MWSQRDPSL--RKSGVGNVFIKNLDKSIDNKAMYDT 130
ERA++ MN L R + + +R+ L R NV+IKN + +D++ + +
Sbjct: 87 AERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKEL 146
Query: 131 FSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRK 190
F FG LS KV DE G SKG+GFV FE E A K+++++NG LN K ++VG+ +
Sbjct: 147 FGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKV 206
Query: 191 EREKELGEKAKLF----------TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDG 240
ER+ EL K + N+Y+KN + +DE+L++ F P+GTITS +VM G
Sbjct: 207 ERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGG 266
Query: 241 KSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRF 292
+S+GFGFV + SPE A KAV NG+ V K LYV AQ+K ER L ++
Sbjct: 267 RSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAHLTNQY 318
>gi|426236179|ref|XP_004012050.1| PREDICTED: polyadenylate-binding protein 1 [Ovis aries]
Length = 577
Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust.
Identities = 192/263 (73%), Positives = 225/263 (85%), Gaps = 2/263 (0%)
Query: 75 LDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAF 134
L ERALDTMNFD +KG+P+RIMWSQRDPSLRKSGVGN+FIKNLDKSIDNKA+YDTFSAF
Sbjct: 4 LAAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAF 63
Query: 135 GSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREK 194
G+ILSCKV DE G SKGYGFVHFET+EAA ++IEK+NGMLLN + VFVG+F RKERE
Sbjct: 64 GNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREA 122
Query: 195 ELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GKSRGFGFVAYESP 253
ELG +AK FTNVYIKNFGED +DE+LK++F +G S +VM ++ GKS+GFGFV++E
Sbjct: 123 ELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERH 182
Query: 254 EFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNL 313
E A+KAV NGKE++GK +YVGRAQKK ER ELKR+FE +K +R+ RYQGVNLYVKNL
Sbjct: 183 EDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNL 242
Query: 314 DDSIDDERLRKEFTPFGTITSAK 336
DD IDDERLRKEF+PFGTITSAK
Sbjct: 243 DDGIDDERLRKEFSPFGTITSAK 265
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 93/232 (40%), Positives = 133/232 (57%), Gaps = 16/232 (6%)
Query: 77 TERALDTMNFDALKGRPIRI----MWSQRDPSL--RKSGVGNVFIKNLDKSIDNKAMYDT 130
ERA++ MN L R + + +R+ L R NV+IKN + +D++ + D
Sbjct: 92 AERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDL 151
Query: 131 FSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRK 190
F FG LS KV DE G SKG+GFV FE E A K+++++NG LN K ++VG+ +
Sbjct: 152 FGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKV 211
Query: 191 EREKELGEKAKLF----------TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDG 240
ER+ EL K + N+Y+KN + +DE+L++ F P+GTITS +VM G
Sbjct: 212 ERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGG 271
Query: 241 KSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRF 292
+S+GFGFV + SPE A KAV NG+ V K LYV AQ+K ER L ++
Sbjct: 272 RSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAHLTNQY 323
>gi|326933139|ref|XP_003212666.1| PREDICTED: polyadenylate-binding protein 4-like [Meleagris
gallopavo]
Length = 636
Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust.
Identities = 191/261 (73%), Positives = 226/261 (86%), Gaps = 2/261 (0%)
Query: 77 TERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGS 136
ERALDTMNFD +KG+PIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKA+YDTFSAFG+
Sbjct: 71 AERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGN 130
Query: 137 ILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKEL 196
ILSCKV DE G SKGY FVHFET++AA+++IEK+NGMLLN + VFVG+F RKERE EL
Sbjct: 131 ILSCKVVCDENG-SKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSRKEREAEL 189
Query: 197 GEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEF 255
G KAK FTNVYIKNFG+D +DE+LKE+F YG S +VM + GKS+GFGFV++E E
Sbjct: 190 GAKAKEFTNVYIKNFGDDMDDERLKELFSKYGKTLSVKVMTDPTGKSKGFGFVSFEKHED 249
Query: 256 AEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDD 315
A KAV+ NGK+++GK+++VGRAQKK ER ELKRRFE LK ER++RYQGVNLY+KNLDD
Sbjct: 250 ANKAVEEMNGKDINGKMVFVGRAQKKVERQAELKRRFEQLKQERISRYQGVNLYIKNLDD 309
Query: 316 SIDDERLRKEFTPFGTITSAK 336
+IDDE+LRKEF+PFG+ITSAK
Sbjct: 310 TIDDEKLRKEFSPFGSITSAK 330
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 85/191 (44%), Positives = 119/191 (62%), Gaps = 10/191 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV+IKN +D++ + + FS +G LS KV D G SKG+GFV FE E ANK++E++
Sbjct: 198 NVYIKNFGDDMDDERLKELFSKYGKTLSVKVMTDPTGKSKGFGFVSFEKHEDANKAVEEM 257
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKLK 221
NG +N K+VFVG+ + ER+ EL + + N+YIKN + +DEKL+
Sbjct: 258 NGKDINGKMVFVGRAQKKVERQAELKRRFEQLKQERISRYQGVNLYIKNLDDTIDDEKLR 317
Query: 222 EMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKK 281
+ F P+G+ITS +VM DG+S+GFGFV + SPE A KAV NG+ V K LYV AQ+K
Sbjct: 318 KEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRK 377
Query: 282 AERTQELKRRF 292
ER L ++
Sbjct: 378 EERKAHLTNQY 388
>gi|693937|emb|CAA88401.1| polyadenylate binding protein II [Homo sapiens]
Length = 522
Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust.
Identities = 196/275 (71%), Positives = 229/275 (83%), Gaps = 4/275 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD +KG+P+RIMWSQRDPSLRKSGVGN+FIKNLDKSI
Sbjct: 28 GYAYVNFQQP--ADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSI 85
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFSAFG+ILSCKV DE G SKGYGFVHFET+EAA ++IEK+NGMLLN + VF
Sbjct: 86 DNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVF 144
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GK 241
VG+F RKERE ELG +AK FTNVYIKNFGED +DE+LK++F +G S +VM ++ GK
Sbjct: 145 VGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGK 204
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
S+GFGFV++E E A+KAV NGKE++GK +YVGRAQKK ER ELKR+FE +K +R+
Sbjct: 205 SKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRIT 264
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLYVKNLDD IDDERLRKEF+PFGTITSAK
Sbjct: 265 RYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAK 299
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 93/232 (40%), Positives = 133/232 (57%), Gaps = 16/232 (6%)
Query: 77 TERALDTMNFDALKGRPIRI----MWSQRDPSL--RKSGVGNVFIKNLDKSIDNKAMYDT 130
ERA++ MN L R + + +R+ L R NV+IKN + +D++ + D
Sbjct: 126 AERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDL 185
Query: 131 FSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRK 190
F FG LS KV DE G SKG+GFV FE E A K+++++NG LN K ++VG+ +
Sbjct: 186 FGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKV 245
Query: 191 EREKELGEKAKLF----------TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDG 240
ER+ EL K + N+Y+KN + +DE+L++ F P+GTITS +VM G
Sbjct: 246 ERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGG 305
Query: 241 KSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRF 292
+S+GFGFV + SPE A KAV NG+ V K LYV AQ+K ER L ++
Sbjct: 306 RSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAHLTNQY 357
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 114/211 (54%), Gaps = 17/211 (8%)
Query: 127 MYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGK 185
+Y+ FS G ILS +V +D S GY +V+F+ A ++++ +N ++ K V
Sbjct: 2 LYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPV---- 57
Query: 186 FIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDGKSRGF 245
I +R+ L + N++IKN + +++ L + F +G I S +V+ ++ S+G+
Sbjct: 58 RIMWSQRDPSLRKSG--VGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGY 115
Query: 246 GFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQG 305
GFV +E+ E AE+A++ NG ++ + ++VGR + + ER EL R +
Sbjct: 116 GFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEF---------- 165
Query: 306 VNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
N+Y+KN + +DDERL+ F FG S K
Sbjct: 166 TNVYIKNFGEDMDDERLKDLFGKFGPALSVK 196
>gi|41152034|ref|NP_958453.1| polyadenylate-binding protein 4 [Danio rerio]
gi|31419252|gb|AAH53126.1| Poly(A) binding protein, cytoplasmic 4 (inducible form) [Danio
rerio]
Length = 637
Score = 400 bits (1027), Expect = e-109, Method: Compositional matrix adjust.
Identities = 195/275 (70%), Positives = 230/275 (83%), Gaps = 4/275 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD +KG+PIRIMWSQRDPSLRKSGVGNVFIKNLDKSI
Sbjct: 54 GYAYVNFQQP--ADAERALDTMNFDVVKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 111
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFSAFG+ILSCKV DE G SKGY FVHFET++AA+++IEK+NGMLLN + VF
Sbjct: 112 DNKALYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQDAADRAIEKMNGMLLNDRKVF 170
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GK 241
VG+F RKERE E+G KAK FTNVYIKNFG+D +D++LKE+F+ YG S +VM + GK
Sbjct: 171 VGRFKSRKEREAEMGAKAKEFTNVYIKNFGDDMDDQRLKELFDKYGKTLSVKVMTDPTGK 230
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
SRGFGFV+YE E A KAV+ NG E++GK ++VGRAQKK ER ELKR+FE LK ER++
Sbjct: 231 SRGFGFVSYEKHEDANKAVEEMNGTELNGKTVFVGRAQKKMERQAELKRKFEQLKQERIS 290
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLY+KNLDD+IDDE+LRKEF+PFG+ITSAK
Sbjct: 291 RYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAK 325
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 83/191 (43%), Positives = 117/191 (61%), Gaps = 10/191 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV+IKN +D++ + + F +G LS KV D G S+G+GFV +E E ANK++E++
Sbjct: 193 NVYIKNFGDDMDDQRLKELFDKYGKTLSVKVMTDPTGKSRGFGFVSYEKHEDANKAVEEM 252
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKLK 221
NG LN K VFVG+ + ER+ EL K + N+YIKN + +DEKL+
Sbjct: 253 NGTELNGKTVFVGRAQKKMERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLR 312
Query: 222 EMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKK 281
+ F P+G+ITS +VM +G+S+GFGFV + SPE A KAV NG+ V K LYV AQ+K
Sbjct: 313 KEFSPFGSITSAKVMLEEGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRK 372
Query: 282 AERTQELKRRF 292
ER L ++
Sbjct: 373 EERKAHLTNQY 383
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 122/228 (53%), Gaps = 17/228 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L I +Y+ FS G +LS +V +D S GY +V+F+ A +++
Sbjct: 11 MASLYVGDLHPDITEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERAL 70
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N ++ K + I +R+ L + NV+IKN + +++ L + F +G
Sbjct: 71 DTMNFDVVKGKPI----RIMWSQRDPSLRKSG--VGNVFIKNLDKSIDNKALYDTFSAFG 124
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S +V+ ++ S+G+ FV +E+ + A++A++ NG ++ + ++VGR + + ER E+
Sbjct: 125 NILSCKVVCDENGSKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSRKEREAEM 184
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ + N+Y+KN D +DD+RL++ F +G S K
Sbjct: 185 GAKAKEF----------TNVYIKNFGDDMDDQRLKELFDKYGKTLSVK 222
>gi|291408596|ref|XP_002720594.1| PREDICTED: polyadenylate-binding protein 1-like isoform 2
[Oryctolagus cuniculus]
Length = 614
Score = 400 bits (1027), Expect = e-109, Method: Compositional matrix adjust.
Identities = 195/275 (70%), Positives = 228/275 (82%), Gaps = 4/275 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD +KG+P+RIMWSQRDPSL KSGVGN+FIKNLDKSI
Sbjct: 53 GYAYVNFQQP--ADAERALDTMNFDVIKGKPVRIMWSQRDPSLHKSGVGNIFIKNLDKSI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFSAFG+ILSCKV DE G SKGYGFVHFET+EAA ++IEK+NGMLLN + VF
Sbjct: 111 DNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVF 169
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GK 241
VG+F RKERE ELG +AK FTNVYIKNFGED +DE+LK++F +G S +VM ++ GK
Sbjct: 170 VGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGK 229
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
S+GFGFV++E E A+KAV NGKE++GK +YVGRAQKK ER ELKR+FE +K +R+
Sbjct: 230 SKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRIT 289
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLYVKNLDD IDDERLRKEF+PFGTITSAK
Sbjct: 290 RYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAK 324
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 93/232 (40%), Positives = 133/232 (57%), Gaps = 16/232 (6%)
Query: 77 TERALDTMNFDALKGRPIRI----MWSQRDPSL--RKSGVGNVFIKNLDKSIDNKAMYDT 130
ERA++ MN L R + + +R+ L R NV+IKN + +D++ + D
Sbjct: 151 AERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDL 210
Query: 131 FSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRK 190
F FG LS KV DE G SKG+GFV FE E A K+++++NG LN K ++VG+ +
Sbjct: 211 FGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKV 270
Query: 191 EREKELGEKAKLF----------TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDG 240
ER+ EL K + N+Y+KN + +DE+L++ F P+GTITS +VM G
Sbjct: 271 ERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGG 330
Query: 241 KSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRF 292
+S+GFGFV + SPE A KAV NG+ V K LYV AQ+K ER L ++
Sbjct: 331 RSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAHLTNQY 382
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 125/236 (52%), Gaps = 17/236 (7%)
Query: 102 DPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFET 160
+PS + ++++ +L + +Y+ FS G ILS +V +D S GY +V+F+
Sbjct: 2 NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 161 EEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKL 220
A ++++ +N ++ K V + +R+ L + N++IKN + +++ L
Sbjct: 62 PADAERALDTMNFDVIKGKPVRIM----WSQRDPSLHKSG--VGNIFIKNLDKSIDNKAL 115
Query: 221 KEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
+ F +G I S +V+ ++ S+G+GFV +E+ E AE+A++ NG ++ + ++VGR +
Sbjct: 116 YDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKS 175
Query: 281 KAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ ER EL R + N+Y+KN + +DDERL+ F FG S K
Sbjct: 176 RKEREAELGARAKEF----------TNVYIKNFGEDMDDERLKDLFGKFGPALSVK 221
>gi|149023880|gb|EDL80377.1| rCG31475, isoform CRA_c [Rattus norvegicus]
Length = 630
Score = 400 bits (1027), Expect = e-109, Method: Compositional matrix adjust.
Identities = 198/275 (72%), Positives = 228/275 (82%), Gaps = 4/275 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD +KG+PIRIMWSQRDPSLRKSGVGNVFIKNLDKSI
Sbjct: 53 GYAYVNFQQP--ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFSAFG+ILSCKV DE G SKGY FVHFET+EAANK+IEK+NGMLLN + VF
Sbjct: 111 DNKALYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQEAANKAIEKMNGMLLNDRKVF 169
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGK 241
VG+F RKERE ELG KAK FTNVYIKNFGE+ +DE L+E+F +G S +VM + GK
Sbjct: 170 VGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDENLRELFSQFGKTLSVKVMRDCSGK 229
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
S+GFGFV+YE E A KAV+ NGKE+ GK ++VGRAQKK ER ELKR+FE LK ER++
Sbjct: 230 SKGFGFVSYEKHEDANKAVEEMNGKEMSGKSIFVGRAQKKVERQAELKRKFEQLKQERIS 289
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLY+KNLDD+IDDE+LRKEF+PFG+ITSAK
Sbjct: 290 RYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAK 324
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 84/191 (43%), Positives = 120/191 (62%), Gaps = 10/191 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV+IKN + +D++ + + FS FG LS KV +D G SKG+GFV +E E ANK++E++
Sbjct: 192 NVYIKNFGEEVDDENLRELFSQFGKTLSVKVMRDCSGKSKGFGFVSYEKHEDANKAVEEM 251
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKLK 221
NG ++ K +FVG+ + ER+ EL K + N+YIKN + +DEKL+
Sbjct: 252 NGKEMSGKSIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLR 311
Query: 222 EMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKK 281
+ F P+G+ITS +VM DG+S+GFGFV + SPE A KAV NG+ V K LYV AQ+K
Sbjct: 312 KEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRK 371
Query: 282 AERTQELKRRF 292
ER L ++
Sbjct: 372 EERKAHLTNQY 382
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 121/228 (53%), Gaps = 17/228 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + +Y+ FS G +LS +V +D S GY +V+F+ A +++
Sbjct: 10 MASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERAL 69
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N ++ K + I +R+ L + NV+IKN + +++ L + F +G
Sbjct: 70 DTMNFDVIKGKPI----RIMWSQRDPSLRKSG--VGNVFIKNLDKSIDNKALYDTFSAFG 123
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S +V+ ++ S+G+ FV +E+ E A KA++ NG ++ + ++VGR + + ER EL
Sbjct: 124 NILSCKVVCDENGSKGYAFVHFETQEAANKAIEKMNGMLLNDRKVFVGRFKSRKEREAEL 183
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ + N+Y+KN + +DDE LR+ F+ FG S K
Sbjct: 184 GAKAKEF----------TNVYIKNFGEEVDDENLRELFSQFGKTLSVK 221
>gi|354485887|ref|XP_003505113.1| PREDICTED: polyadenylate-binding protein 4-like [Cricetulus
griseus]
Length = 685
Score = 399 bits (1026), Expect = e-109, Method: Compositional matrix adjust.
Identities = 197/275 (71%), Positives = 228/275 (82%), Gaps = 4/275 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD +KG+PIRIMWSQRDPSLRKSGVGNVFIKNLDKSI
Sbjct: 75 GYAYVNFQQP--ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 132
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFSAFG+ILSCKV DE G SKGY FVHFET+EAA+K+IEK+NGMLLN + VF
Sbjct: 133 DNKALYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVF 191
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGK 241
VG+F RKERE ELG KAK FTNVYIKNFGE+ +D+ LKE+F +G S +VM + GK
Sbjct: 192 VGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDDNLKELFSQFGKTLSVKVMRDPSGK 251
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
S+GFGFV+YE E A KAV+ NGKE+ GK ++VGRAQKK ER ELKR+FE LK ER++
Sbjct: 252 SKGFGFVSYEKHEDANKAVEEMNGKEMSGKAIFVGRAQKKVERQAELKRKFEQLKQERIS 311
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLY+KNLDD+IDDE+LRKEF+PFG+ITSAK
Sbjct: 312 RYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAK 346
Score = 161 bits (408), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 84/191 (43%), Positives = 119/191 (62%), Gaps = 10/191 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV+IKN + +D+ + + FS FG LS KV +D G SKG+GFV +E E ANK++E++
Sbjct: 214 NVYIKNFGEEVDDDNLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEM 273
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKLK 221
NG ++ K +FVG+ + ER+ EL K + N+YIKN + +DEKL+
Sbjct: 274 NGKEMSGKAIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLR 333
Query: 222 EMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKK 281
+ F P+G+ITS +VM DG+S+GFGFV + SPE A KAV NG+ V K LYV AQ+K
Sbjct: 334 KEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRK 393
Query: 282 AERTQELKRRF 292
ER L ++
Sbjct: 394 EERKAHLTNQY 404
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 122/228 (53%), Gaps = 17/228 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + +Y+ FS G +LS +V +D S GY +V+F+ A +++
Sbjct: 32 MASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERAL 91
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N ++ K + I +R+ L + NV+IKN + +++ L + F +G
Sbjct: 92 DTMNFDVIKGKPI----RIMWSQRDPSLRKSG--VGNVFIKNLDKSIDNKALYDTFSAFG 145
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S +V+ ++ S+G+ FV +E+ E A+KA++ NG ++ + ++VGR + + ER EL
Sbjct: 146 NILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAEL 205
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ + N+Y+KN + +DD+ L++ F+ FG S K
Sbjct: 206 GAKAKEF----------TNVYIKNFGEEVDDDNLKELFSQFGKTLSVK 243
>gi|440913295|gb|ELR62762.1| Polyadenylate-binding protein 1, partial [Bos grunniens mutus]
Length = 572
Score = 399 bits (1026), Expect = e-109, Method: Compositional matrix adjust.
Identities = 191/261 (73%), Positives = 224/261 (85%), Gaps = 2/261 (0%)
Query: 77 TERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGS 136
ERALDTMNFD +KG+P+RIMWSQRDPSLRKSGVGN+FIKNLDKSIDNKA+YDTFSAFG+
Sbjct: 1 AERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGN 60
Query: 137 ILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKEL 196
ILSCKV DE G SKGYGFVHFET+EAA ++IEK+NGMLLN + VFVG+F RKERE EL
Sbjct: 61 ILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAEL 119
Query: 197 GEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEF 255
G +AK FTNVYIKNFGED +DE+LK++F +G S +VM ++ GKS+GFGFV++E E
Sbjct: 120 GARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHED 179
Query: 256 AEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDD 315
A+KAV NGKE++GK +YVGRAQKK ER ELKR+FE +K +R+ RYQGVNLYVKNLDD
Sbjct: 180 AQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDD 239
Query: 316 SIDDERLRKEFTPFGTITSAK 336
IDDERLRKEF+PFGTITSAK
Sbjct: 240 GIDDERLRKEFSPFGTITSAK 260
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 93/232 (40%), Positives = 133/232 (57%), Gaps = 16/232 (6%)
Query: 77 TERALDTMNFDALKGRPIRI----MWSQRDPSL--RKSGVGNVFIKNLDKSIDNKAMYDT 130
ERA++ MN L R + + +R+ L R NV+IKN + +D++ + D
Sbjct: 87 AERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDL 146
Query: 131 FSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRK 190
F FG LS KV DE G SKG+GFV FE E A K+++++NG LN K ++VG+ +
Sbjct: 147 FGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKV 206
Query: 191 EREKELGEKAKLF----------TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDG 240
ER+ EL K + N+Y+KN + +DE+L++ F P+GTITS +VM G
Sbjct: 207 ERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGG 266
Query: 241 KSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRF 292
+S+GFGFV + SPE A KAV NG+ V K LYV AQ+K ER L ++
Sbjct: 267 RSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAHLTNQY 318
>gi|354498761|ref|XP_003511482.1| PREDICTED: polyadenylate-binding protein 1-like, partial
[Cricetulus griseus]
Length = 571
Score = 399 bits (1026), Expect = e-109, Method: Compositional matrix adjust.
Identities = 191/260 (73%), Positives = 224/260 (86%), Gaps = 2/260 (0%)
Query: 78 ERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSI 137
ERALDTMNFD +KG+P+RIMWSQRDPSLRKSGVGN+FIKNLDKSIDNKA+YDTFSAFG+I
Sbjct: 1 ERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNI 60
Query: 138 LSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELG 197
LSCKV DE G SKGYGFVHFET+EAA ++IEK+NGMLLN + VFVG+F RKERE ELG
Sbjct: 61 LSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELG 119
Query: 198 EKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFA 256
+AK FTNVYIKNFGED +DE+LK++F +G S +VM ++ GKS+GFGFV++E E A
Sbjct: 120 ARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDA 179
Query: 257 EKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDS 316
+KAV NGKE++GK +YVGRAQKK ER ELKR+FE +K +R+ RYQGVNLYVKNLDD
Sbjct: 180 QKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDG 239
Query: 317 IDDERLRKEFTPFGTITSAK 336
IDDERLRKEF+PFGTITSAK
Sbjct: 240 IDDERLRKEFSPFGTITSAK 259
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 97/252 (38%), Positives = 139/252 (55%), Gaps = 20/252 (7%)
Query: 77 TERALDTMNFDALKGRPIRI----MWSQRDPSL--RKSGVGNVFIKNLDKSIDNKAMYDT 130
ERA++ MN L R + + +R+ L R NV+IKN + +D++ + D
Sbjct: 86 AERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDL 145
Query: 131 FSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRK 190
F FG LS KV DE G SKG+GFV FE E A K+++++NG LN K ++VG+ +
Sbjct: 146 FGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKV 205
Query: 191 EREKELGEKAKLF----------TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDG 240
ER+ EL K + N+Y+KN + +DE+L++ F P+GTITS +VM G
Sbjct: 206 ERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGG 265
Query: 241 KSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERL 300
+S+GFGFV + SPE A KAV NG+ V K YV AQ+K ER L + ++R+
Sbjct: 266 RSKGFGFVCFSSPEEATKAVTEMNGRIVATKPFYVALAQRKEERQAHLTNQH----MQRM 321
Query: 301 NRYQGVNLYVKN 312
Q V V N
Sbjct: 322 ASVQAVPNPVIN 333
>gi|148232824|ref|NP_001080204.1| polyadenylate-binding protein 1-A [Xenopus laevis]
gi|623598|gb|AAA60936.1| poly(A)-binding protein [Xenopus laevis]
Length = 633
Score = 399 bits (1025), Expect = e-109, Method: Compositional matrix adjust.
Identities = 196/275 (71%), Positives = 226/275 (82%), Gaps = 4/275 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD +KGRP+RIMWSQRDPSLRKSGVGN+FIKNLDKSI
Sbjct: 53 GYAYVNFQQP--ADAERALDTMNFDVIKGRPVRIMWSQRDPSLRKSGVGNIFIKNLDKSI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFSAFG+ILSCKV DE G SKGYGFVHFET+EAA ++I+K+NGMLLN + VF
Sbjct: 111 DNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIDKMNGMLLNDRKVF 169
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GK 241
VG+F RKERE ELG +AK FTNVYIKNFG+D NDE+LKEMF YG S +VM +D GK
Sbjct: 170 VGRFKSRKEREAELGARAKEFTNVYIKNFGDDMNDERLKEMFGKYGPALSVKVMTDDNGK 229
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
S+GFGFV++E E A+KAV GK+++GK ++VGRAQKK ER ELKR+FE + +R+
Sbjct: 230 SKGFGFVSFERHEDAQKAVDEMYGKDMNGKSMFVGRAQKKVERQTELKRKFEQMNQDRIT 289
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLYVKNLDD IDDERLRKEF PFGTITSAK
Sbjct: 290 RYQGVNLYVKNLDDGIDDERLRKEFLPFGTITSAK 324
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 89/232 (38%), Positives = 131/232 (56%), Gaps = 16/232 (6%)
Query: 77 TERALDTMNFDALKGRPIRI----MWSQRDPSL--RKSGVGNVFIKNLDKSIDNKAMYDT 130
ERA+D MN L R + + +R+ L R NV+IKN ++++ + +
Sbjct: 151 AERAIDKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGDDMNDERLKEM 210
Query: 131 FSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRK 190
F +G LS KV D+ G SKG+GFV FE E A K+++++ G +N K +FVG+ +
Sbjct: 211 FGKYGPALSVKVMTDDNGKSKGFGFVSFERHEDAQKAVDEMYGKDMNGKSMFVGRAQKKV 270
Query: 191 EREKELGEKAKLF----------TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDG 240
ER+ EL K + N+Y+KN + +DE+L++ F P+GTITS +VM G
Sbjct: 271 ERQTELKRKFEQMNQDRITRYQGVNLYVKNLDDGIDDERLRKEFLPFGTITSAKVMMEGG 330
Query: 241 KSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRF 292
+S+GFGFV + SPE A KAV NG+ V K LYV AQ+K ER L ++
Sbjct: 331 RSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAHLTNQY 382
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 126/236 (53%), Gaps = 17/236 (7%)
Query: 102 DPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFET 160
+PS + ++++ +L + + +Y+ FS G ILS +V +D S GY +V+F+
Sbjct: 2 NPSAPSYPMASLYVGDLHQDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 161 EEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKL 220
A ++++ +N ++ + V I +R+ L + N++IKN + +++ L
Sbjct: 62 PADAERALDTMNFDVIKGRPV----RIMWSQRDPSLRKSG--VGNIFIKNLDKSIDNKAL 115
Query: 221 KEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
+ F +G I S +V+ ++ S+G+GFV +E+ E AE+A+ NG ++ + ++VGR +
Sbjct: 116 YDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIDKMNGMLLNDRKVFVGRFKS 175
Query: 281 KAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ ER EL R + N+Y+KN D ++DERL++ F +G S K
Sbjct: 176 RKEREAELGARAKEF----------TNVYIKNFGDDMNDERLKEMFGKYGPALSVK 221
>gi|13096978|gb|AAH03283.1| Poly(A) binding protein, cytoplasmic 4 [Mus musculus]
Length = 660
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 197/275 (71%), Positives = 228/275 (82%), Gaps = 4/275 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD +KG+PIRIMWSQRDPSLRKSGVGNVFIKNLDKSI
Sbjct: 53 GYAYVNFQQP--ADAERALDTMNFDVMKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFSAFG+ILSCKV DE G SKGY FVHFET+EAA+K+IEK+NGMLLN + VF
Sbjct: 111 DNKALYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVF 169
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGK 241
VG+F RKERE ELG KAK FTNVYIKNFGE+ +D LKE+F +G S +VM ++ GK
Sbjct: 170 VGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDGNLKELFSQFGKTLSVKVMRDSSGK 229
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
S+GFGFV+YE E A KAV+ NGKE+ GK ++VGRAQKK ER ELKR+FE LK ER++
Sbjct: 230 SKGFGFVSYEKHEDANKAVEEMNGKEMSGKAIFVGRAQKKVERQAELKRKFEQLKQERIS 289
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLY+KNLDD+IDDE+LRKEF+PFG+ITSAK
Sbjct: 290 RYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAK 324
Score = 161 bits (408), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 84/191 (43%), Positives = 119/191 (62%), Gaps = 10/191 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV+IKN + +D+ + + FS FG LS KV +D G SKG+GFV +E E ANK++E++
Sbjct: 192 NVYIKNFGEEVDDGNLKELFSQFGKTLSVKVMRDSSGKSKGFGFVSYEKHEDANKAVEEM 251
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKLK 221
NG ++ K +FVG+ + ER+ EL K + N+YIKN + +DEKL+
Sbjct: 252 NGKEMSGKAIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLR 311
Query: 222 EMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKK 281
+ F P+G+ITS +VM DG+S+GFGFV + SPE A KAV NG+ V K LYV AQ+K
Sbjct: 312 KEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRK 371
Query: 282 AERTQELKRRF 292
ER L ++
Sbjct: 372 EERKAHLTNQY 382
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 121/228 (53%), Gaps = 17/228 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + +Y+ FS G +LS +V +D S GY +V+F+ A +++
Sbjct: 10 MASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERAL 69
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N ++ K + I +R+ L + NV+IKN + +++ L + F +G
Sbjct: 70 DTMNFDVMKGKPI----RIMWSQRDPSLRKSG--VGNVFIKNLDKSIDNKALYDTFSAFG 123
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S +V+ ++ S+G+ FV +E+ E A+KA++ NG ++ + ++VGR + + ER EL
Sbjct: 124 NILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAEL 183
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ + N+Y+KN + +DD L++ F+ FG S K
Sbjct: 184 GAKAKEF----------TNVYIKNFGEEVDDGNLKELFSQFGKTLSVK 221
>gi|197097606|ref|NP_001126097.1| polyadenylate-binding protein 1 [Pongo abelii]
gi|55730342|emb|CAH91893.1| hypothetical protein [Pongo abelii]
Length = 636
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 195/275 (70%), Positives = 228/275 (82%), Gaps = 4/275 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD +KG+P+RIMWSQRDPSLRKSGVGN+FIKNLDKSI
Sbjct: 53 GYAYVNFQQP--ADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
D KA+YDTFSAFG+ILSCKV DE G SKGYGFVHFET+EAA ++IEK+NGMLLN + VF
Sbjct: 111 DIKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVF 169
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GK 241
VG+F RKERE ELG +AK FTNVYIKNFGED +DE+LK++F +G S +VM ++ GK
Sbjct: 170 VGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGK 229
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
S+GFGFV++E E A+KAV NGKE++GK +YVGRAQKK ER ELKR+FE +K +R+
Sbjct: 230 SKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRIT 289
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLYVKNLDD IDDERLRKEF+PFGTITSAK
Sbjct: 290 RYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAK 324
Score = 160 bits (405), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 93/232 (40%), Positives = 133/232 (57%), Gaps = 16/232 (6%)
Query: 77 TERALDTMNFDALKGRPIRI----MWSQRDPSL--RKSGVGNVFIKNLDKSIDNKAMYDT 130
ERA++ MN L R + + +R+ L R NV+IKN + +D++ + D
Sbjct: 151 AERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDL 210
Query: 131 FSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRK 190
F FG LS KV DE G SKG+GFV FE E A K+++++NG LN K ++VG+ +
Sbjct: 211 FGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKV 270
Query: 191 EREKELGEKAKLF----------TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDG 240
ER+ EL K + N+Y+KN + +DE+L++ F P+GTITS +VM G
Sbjct: 271 ERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGG 330
Query: 241 KSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRF 292
+S+GFGFV + SPE A KAV NG+ V K LYV AQ+K ER L ++
Sbjct: 331 RSKGFGFVCFSSPEEATKAVTEMNGRVVATKPLYVALAQRKEERQAHLTNQY 382
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 124/236 (52%), Gaps = 17/236 (7%)
Query: 102 DPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFET 160
+PS + ++++ +L + +Y+ FS G ILS +V +D S GY +V+F+
Sbjct: 2 NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 161 EEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKL 220
A ++++ +N ++ K V + +R+ L + N++IKN + + + L
Sbjct: 62 PADAERALDTMNFDVIKGKPVRIM----WSQRDPSLRKSG--VGNIFIKNLDKSIDIKAL 115
Query: 221 KEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
+ F +G I S +V+ ++ S+G+GFV +E+ E AE+A++ NG ++ + ++VGR +
Sbjct: 116 YDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKS 175
Query: 281 KAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ ER EL R + N+Y+KN + +DDERL+ F FG S K
Sbjct: 176 RKEREAELGARAKEF----------TNVYIKNFGEDMDDERLKDLFGKFGPALSVK 221
>gi|349803919|gb|AEQ17432.1| putative poly binding cytoplasmic 1 [Hymenochirus curtipes]
Length = 590
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 197/275 (71%), Positives = 228/275 (82%), Gaps = 5/275 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD +KG+P+RIMWSQRDPSLRKSGVGN+FIKNLDKSI
Sbjct: 53 GYAYVNFQQP--ADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFSAFG+ILSCKV DE G SKGYGFVHFET+EAA ++I+K+NGMLLN + VF
Sbjct: 111 DNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIDKMNGMLLNDRKVF 169
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GK 241
VG+F RKERE ELG +AK FTNVYIKNFGED +DE+LKEMF YG S +VM +D GK
Sbjct: 170 VGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKEMFGKYGPALSVKVMTDDSGK 229
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
S+GFGFV++E E A+KAV NGK+++GK +YVGRA KK ER ELKR+FE +K +R+
Sbjct: 230 SKGFGFVSFERHEDAQKAVDDMNGKDMNGKAIYVGRA-KKVERQTELKRKFEQMKQDRIT 288
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLYVKNLDD IDDERLRKEF+PFGTITSAK
Sbjct: 289 RYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAK 323
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 70/190 (36%), Positives = 108/190 (56%), Gaps = 17/190 (8%)
Query: 77 TERALDTMNFDALKGRPIRI----MWSQRDPSL--RKSGVGNVFIKNLDKSIDNKAMYDT 130
ERA+D MN L R + + +R+ L R NV+IKN + +D++ + +
Sbjct: 151 AERAIDKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKEM 210
Query: 131 FSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRK 190
F +G LS KV D+ G SKG+GFV FE E A K+++ +NG +N K ++VG+ +
Sbjct: 211 FGKYGPALSVKVMTDDSGKSKGFGFVSFERHEDAQKAVDDMNGKDMNGKAIYVGR-AKKV 269
Query: 191 EREKELGEKAKLF----------TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDG 240
ER+ EL K + N+Y+KN + +DE+L++ F P+GTITS +VM G
Sbjct: 270 ERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGG 329
Query: 241 KSRGFGFVAY 250
+S+GFGFV +
Sbjct: 330 RSKGFGFVCF 339
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 126/236 (53%), Gaps = 17/236 (7%)
Query: 102 DPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFET 160
+PS + ++++ +L + + +Y+ FS G ILS +V +D S GY +V+F+
Sbjct: 2 NPSAPSYPMASLYVGDLHQDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 161 EEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKL 220
A ++++ +N ++ K V + +R+ L + N++IKN + +++ L
Sbjct: 62 PADAERALDTMNFDVIKGKPVRIM----WSQRDPSLRKSG--VGNIFIKNLDKSIDNKAL 115
Query: 221 KEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
+ F +G I S +V+ ++ S+G+GFV +E+ E AE+A+ NG ++ + ++VGR +
Sbjct: 116 YDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIDKMNGMLLNDRKVFVGRFKS 175
Query: 281 KAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ ER EL R + N+Y+KN + +DDERL++ F +G S K
Sbjct: 176 RKEREAELGARAKEF----------TNVYIKNFGEDMDDERLKEMFGKYGPALSVK 221
>gi|119612225|gb|EAW91819.1| poly(A) binding protein, cytoplasmic 1, isoform CRA_e [Homo
sapiens]
Length = 633
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 196/275 (71%), Positives = 228/275 (82%), Gaps = 7/275 (2%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD +KG+P+RIMWSQRDPSLRKSGVGN+FIKNLDKSI
Sbjct: 53 GYAYVNFQQP--ADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFSAFG+ILSCKV DE G SKGYGFVHFET+EAA ++IEK+NGMLLN + VF
Sbjct: 111 DNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVF 169
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GK 241
VG+F RKERE ELG +AK FTNVYIKNFGED +DE+LK++F G S +VM ++ GK
Sbjct: 170 VGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLF---GPALSVKVMTDESGK 226
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
S+GFGFV++E E A+KAV NGKE++GK +YVGRAQKK ER ELKR+FE +K +R+
Sbjct: 227 SKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRIT 286
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLYVKNLDD IDDERLRKEF+PFGTITSAK
Sbjct: 287 RYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAK 321
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 92/232 (39%), Positives = 132/232 (56%), Gaps = 19/232 (8%)
Query: 77 TERALDTMNFDALKGRPIRI----MWSQRDPSL--RKSGVGNVFIKNLDKSIDNKAMYDT 130
ERA++ MN L R + + +R+ L R NV+IKN + +D++ + D
Sbjct: 151 AERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDL 210
Query: 131 FSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRK 190
F G LS KV DE G SKG+GFV FE E A K+++++NG LN K ++VG+ +
Sbjct: 211 F---GPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKV 267
Query: 191 EREKELGEKAKLF----------TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDG 240
ER+ EL K + N+Y+KN + +DE+L++ F P+GTITS +VM G
Sbjct: 268 ERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGG 327
Query: 241 KSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRF 292
+S+GFGFV + SPE A KAV NG+ V K LYV AQ+K ER L ++
Sbjct: 328 RSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAHLTNQY 379
Score = 107 bits (267), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 122/228 (53%), Gaps = 17/228 (7%)
Query: 102 DPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFET 160
+PS + ++++ +L + +Y+ FS G ILS +V +D S GY +V+F+
Sbjct: 2 NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 161 EEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKL 220
A ++++ +N ++ K V + +R+ L + N++IKN + +++ L
Sbjct: 62 PADAERALDTMNFDVIKGKPVRIM----WSQRDPSLRKSG--VGNIFIKNLDKSIDNKAL 115
Query: 221 KEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
+ F +G I S +V+ ++ S+G+GFV +E+ E AE+A++ NG ++ + ++VGR +
Sbjct: 116 YDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKS 175
Query: 281 KAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTP 328
+ ER EL R + N+Y+KN + +DDERL+ F P
Sbjct: 176 RKEREAELGARAKEF----------TNVYIKNFGEDMDDERLKDLFGP 213
>gi|390476078|ref|XP_002759394.2| PREDICTED: polyadenylate-binding protein 1-like [Callithrix
jacchus]
Length = 633
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 196/275 (71%), Positives = 228/275 (82%), Gaps = 7/275 (2%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD +KG+P+RIMWSQRDPSLRKSGVGN+FIKNLDKSI
Sbjct: 53 GYAYVNFQQP--ADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFSAFG+ILSCKV DE G SKGYGFVHFET+EAA ++IEK+NGMLLN + VF
Sbjct: 111 DNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVF 169
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GK 241
VG+F RKERE ELG +AK FTNVYIKNFGED +DE+LK++F G S +VM ++ GK
Sbjct: 170 VGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLF---GPALSVKVMTDESGK 226
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
S+GFGFV++E E A+KAV NGKE++GK +YVGRAQKK ER ELKR+FE +K +R+
Sbjct: 227 SKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRIT 286
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLYVKNLDD IDDERLRKEF+PFGTITSAK
Sbjct: 287 RYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAK 321
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 92/232 (39%), Positives = 132/232 (56%), Gaps = 19/232 (8%)
Query: 77 TERALDTMNFDALKGRPIRI----MWSQRDPSL--RKSGVGNVFIKNLDKSIDNKAMYDT 130
ERA++ MN L R + + +R+ L R NV+IKN + +D++ + D
Sbjct: 151 AERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDL 210
Query: 131 FSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRK 190
F G LS KV DE G SKG+GFV FE E A K+++++NG LN K ++VG+ +
Sbjct: 211 F---GPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKV 267
Query: 191 EREKELGEKAKLF----------TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDG 240
ER+ EL K + N+Y+KN + +DE+L++ F P+GTITS +VM G
Sbjct: 268 ERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGG 327
Query: 241 KSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRF 292
+S+GFGFV + SPE A KAV NG+ V K LYV AQ+K ER L ++
Sbjct: 328 RSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAHLTNQY 379
Score = 107 bits (267), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 122/228 (53%), Gaps = 17/228 (7%)
Query: 102 DPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFET 160
+PS + ++++ +L + +Y+ FS G ILS +V +D S GY +V+F+
Sbjct: 2 NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 161 EEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKL 220
A ++++ +N ++ K V + +R+ L + N++IKN + +++ L
Sbjct: 62 PADAERALDTMNFDVIKGKPVRIM----WSQRDPSLRKSG--VGNIFIKNLDKSIDNKAL 115
Query: 221 KEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
+ F +G I S +V+ ++ S+G+GFV +E+ E AE+A++ NG ++ + ++VGR +
Sbjct: 116 YDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKS 175
Query: 281 KAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTP 328
+ ER EL R + N+Y+KN + +DDERL+ F P
Sbjct: 176 RKEREAELGARAKEF----------TNVYIKNFGEDMDDERLKDLFGP 213
>gi|35570|emb|CAA68428.1| unnamed protein product [Homo sapiens]
Length = 633
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 196/275 (71%), Positives = 228/275 (82%), Gaps = 7/275 (2%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD +KG+P+RIMWSQRDPSLRKSGVGN+FIKNLDKSI
Sbjct: 53 GYAYVNFQQP--ADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFSAFG+ILSCKV DE G SKGYGFVHFET+EAA ++IEK+NGMLLN + VF
Sbjct: 111 DNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVF 169
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GK 241
VG+F RKERE ELG +AK FTNVYIKNFGED +DE+LK++F G S +VM ++ GK
Sbjct: 170 VGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLF---GPALSVKVMTDESGK 226
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
S+GFGFV++E E A+KAV NGKE++GK +YVGRAQKK ER ELKR+FE +K +R+
Sbjct: 227 SKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRIT 286
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLYVKNLDD IDDERLRKEF+PFGTITSAK
Sbjct: 287 RYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAK 321
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 92/232 (39%), Positives = 132/232 (56%), Gaps = 19/232 (8%)
Query: 77 TERALDTMNFDALKGRPIRI----MWSQRDPSL--RKSGVGNVFIKNLDKSIDNKAMYDT 130
ERA++ MN L R + + +R+ L R NV+IKN + +D++ + D
Sbjct: 151 AERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDL 210
Query: 131 FSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRK 190
F G LS KV DE G SKG+GFV FE E A K+++++NG LN K ++VG+ +
Sbjct: 211 F---GPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKV 267
Query: 191 EREKELGEKAKLF----------TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDG 240
ER+ EL K + N+Y+KN + +DE+L++ F P+GTITS +VM G
Sbjct: 268 ERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGG 327
Query: 241 KSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRF 292
+S+GFGFV + SPE A KAV NG+ V K LYV AQ+K ER L ++
Sbjct: 328 RSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAHLTNQY 379
Score = 107 bits (267), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 122/228 (53%), Gaps = 17/228 (7%)
Query: 102 DPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFET 160
+PS + ++++ +L + +Y+ FS G ILS +V +D S GY +V+F+
Sbjct: 2 NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 161 EEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKL 220
A ++++ +N ++ K V + +R+ L + N++IKN + +++ L
Sbjct: 62 PADAERALDTMNFDVIKGKPVRIM----WSQRDPSLRKSG--VGNIFIKNLDKSIDNKAL 115
Query: 221 KEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
+ F +G I S +V+ ++ S+G+GFV +E+ E AE+A++ NG ++ + ++VGR +
Sbjct: 116 YDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKS 175
Query: 281 KAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTP 328
+ ER EL R + N+Y+KN + +DDERL+ F P
Sbjct: 176 RKEREAELGARAKEF----------TNVYIKNFGEDMDDERLKDLFGP 213
>gi|126330205|ref|XP_001365269.1| PREDICTED: polyadenylate-binding protein 4 isoform 1 [Monodelphis
domestica]
Length = 630
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 194/275 (70%), Positives = 230/275 (83%), Gaps = 4/275 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD +KG+PIRIMWSQRDPSLRKSGVGNVFIKNLDKSI
Sbjct: 53 GYAYVNFQQP--ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFSAFG+ILSCKV DE G SKGY FVHFET++AA+++IEK+NGMLLN + VF
Sbjct: 111 DNKALYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQDAADRAIEKMNGMLLNDRKVF 169
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGK 241
VG+F RKERE ELG KAK FTNVYIKNFG+D +D +LKE+F YG S +VM + GK
Sbjct: 170 VGRFKSRKEREAELGAKAKEFTNVYIKNFGDDMDDGRLKELFSKYGKTLSVKVMTDPSGK 229
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
S+GFGFV++E E A KAV+ NGK+++GK+++VGRAQKK ER ELKR+FE LK ER++
Sbjct: 230 SKGFGFVSFEKHEDANKAVEEMNGKDINGKMVFVGRAQKKVERQAELKRKFEQLKQERIS 289
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLY+KNLDD+IDDE+LRKEF+PFG+ITSAK
Sbjct: 290 RYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAK 324
Score = 161 bits (408), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 85/191 (44%), Positives = 118/191 (61%), Gaps = 10/191 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV+IKN +D+ + + FS +G LS KV D G SKG+GFV FE E ANK++E++
Sbjct: 192 NVYIKNFGDDMDDGRLKELFSKYGKTLSVKVMTDPSGKSKGFGFVSFEKHEDANKAVEEM 251
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKLK 221
NG +N K+VFVG+ + ER+ EL K + N+YIKN + +DEKL+
Sbjct: 252 NGKDINGKMVFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLR 311
Query: 222 EMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKK 281
+ F P+G+ITS +VM DG+S+GFGFV + SP+ A KAV NG+ V K LYV AQ+K
Sbjct: 312 KEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPDEATKAVTEMNGRIVGSKPLYVALAQRK 371
Query: 282 AERTQELKRRF 292
ER L ++
Sbjct: 372 EERKAHLTNQY 382
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 122/228 (53%), Gaps = 17/228 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + +Y+ FS G +LS +V +D S GY +V+F+ A +++
Sbjct: 10 MASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERAL 69
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N ++ K + I +R+ L + NV+IKN + +++ L + F +G
Sbjct: 70 DTMNFDVIKGKPI----RIMWSQRDPSLRKSG--VGNVFIKNLDKSIDNKALYDTFSAFG 123
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S +V+ ++ S+G+ FV +E+ + A++A++ NG ++ + ++VGR + + ER EL
Sbjct: 124 NILSCKVVCDENGSKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSRKEREAEL 183
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ + N+Y+KN D +DD RL++ F+ +G S K
Sbjct: 184 GAKAKEF----------TNVYIKNFGDDMDDGRLKELFSKYGKTLSVK 221
>gi|148698435|gb|EDL30382.1| mCG5546, isoform CRA_a [Mus musculus]
Length = 632
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 196/275 (71%), Positives = 228/275 (82%), Gaps = 4/275 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD +KG+PIRIMWSQRDPSLRKSGVGNVFIKNLDKSI
Sbjct: 70 GYAYVNFQQP--ADAERALDTMNFDVMKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 127
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFSAFG+ILSCKV DE G SKGY FVHFET+EAA+K+IEK+NGMLLN + VF
Sbjct: 128 DNKALYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVF 186
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGK 241
VG+F RKERE ELG KAK FTNVYIKNFGE+ +D LKE+F +G S +VM ++ GK
Sbjct: 187 VGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDGNLKELFSQFGKTLSVKVMRDSSGK 246
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
S+GFGFV+YE E A KAV+ NGKE+ GK ++VGRAQKK ER ELKR+FE LK ER++
Sbjct: 247 SKGFGFVSYEKHEDANKAVEEMNGKEMSGKAIFVGRAQKKVERQAELKRKFEQLKQERIS 306
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLY+KNLDD+IDDE+LR+EF+PFG+ITSAK
Sbjct: 307 RYQGVNLYIKNLDDTIDDEKLRREFSPFGSITSAK 341
Score = 161 bits (407), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 84/191 (43%), Positives = 118/191 (61%), Gaps = 10/191 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV+IKN + +D+ + + FS FG LS KV +D G SKG+GFV +E E ANK++E++
Sbjct: 209 NVYIKNFGEEVDDGNLKELFSQFGKTLSVKVMRDSSGKSKGFGFVSYEKHEDANKAVEEM 268
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKLK 221
NG ++ K +FVG+ + ER+ EL K + N+YIKN + +DEKL+
Sbjct: 269 NGKEMSGKAIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLR 328
Query: 222 EMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKK 281
F P+G+ITS +VM DG+S+GFGFV + SPE A KAV NG+ V K LYV AQ+K
Sbjct: 329 REFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRK 388
Query: 282 AERTQELKRRF 292
ER L ++
Sbjct: 389 EERKAHLTNQY 399
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 121/228 (53%), Gaps = 17/228 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + +Y+ FS G +LS +V +D S GY +V+F+ A +++
Sbjct: 27 MASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERAL 86
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N ++ K + I +R+ L + NV+IKN + +++ L + F +G
Sbjct: 87 DTMNFDVMKGKPI----RIMWSQRDPSLRKSG--VGNVFIKNLDKSIDNKALYDTFSAFG 140
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S +V+ ++ S+G+ FV +E+ E A+KA++ NG ++ + ++VGR + + ER EL
Sbjct: 141 NILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAEL 200
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ + N+Y+KN + +DD L++ F+ FG S K
Sbjct: 201 GAKAKEF----------TNVYIKNFGEEVDDGNLKELFSQFGKTLSVK 238
>gi|34419622|ref|NP_570951.2| polyadenylate-binding protein 4 isoform 1 [Mus musculus]
gi|33991671|gb|AAH56432.1| Poly(A) binding protein, cytoplasmic 4 [Mus musculus]
gi|148698437|gb|EDL30384.1| mCG5546, isoform CRA_c [Mus musculus]
Length = 660
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 196/275 (71%), Positives = 228/275 (82%), Gaps = 4/275 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD +KG+PIRIMWSQRDPSLRKSGVGNVFIKNLDKSI
Sbjct: 53 GYAYVNFQQP--ADAERALDTMNFDVMKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFSAFG+ILSCKV DE G SKGY FVHFET+EAA+K+IEK+NGMLLN + VF
Sbjct: 111 DNKALYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVF 169
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGK 241
VG+F RKERE ELG KAK FTNVYIKNFGE+ +D LKE+F +G S +VM ++ GK
Sbjct: 170 VGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDGNLKELFSQFGKTLSVKVMRDSSGK 229
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
S+GFGFV+YE E A KAV+ NGKE+ GK ++VGRAQKK ER ELKR+FE LK ER++
Sbjct: 230 SKGFGFVSYEKHEDANKAVEEMNGKEMSGKAIFVGRAQKKVERQAELKRKFEQLKQERIS 289
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLY+KNLDD+IDDE+LR+EF+PFG+ITSAK
Sbjct: 290 RYQGVNLYIKNLDDTIDDEKLRREFSPFGSITSAK 324
Score = 161 bits (407), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 84/191 (43%), Positives = 118/191 (61%), Gaps = 10/191 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV+IKN + +D+ + + FS FG LS KV +D G SKG+GFV +E E ANK++E++
Sbjct: 192 NVYIKNFGEEVDDGNLKELFSQFGKTLSVKVMRDSSGKSKGFGFVSYEKHEDANKAVEEM 251
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKLK 221
NG ++ K +FVG+ + ER+ EL K + N+YIKN + +DEKL+
Sbjct: 252 NGKEMSGKAIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLR 311
Query: 222 EMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKK 281
F P+G+ITS +VM DG+S+GFGFV + SPE A KAV NG+ V K LYV AQ+K
Sbjct: 312 REFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRK 371
Query: 282 AERTQELKRRF 292
ER L ++
Sbjct: 372 EERKAHLTNQY 382
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 121/228 (53%), Gaps = 17/228 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + +Y+ FS G +LS +V +D S GY +V+F+ A +++
Sbjct: 10 MASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERAL 69
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N ++ K + I +R+ L + NV+IKN + +++ L + F +G
Sbjct: 70 DTMNFDVMKGKPI----RIMWSQRDPSLRKSG--VGNVFIKNLDKSIDNKALYDTFSAFG 123
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S +V+ ++ S+G+ FV +E+ E A+KA++ NG ++ + ++VGR + + ER EL
Sbjct: 124 NILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAEL 183
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ + N+Y+KN + +DD L++ F+ FG S K
Sbjct: 184 GAKAKEF----------TNVYIKNFGEEVDDGNLKELFSQFGKTLSVK 221
>gi|126320658|ref|XP_001364500.1| PREDICTED: polyadenylate-binding protein 4-like [Monodelphis
domestica]
Length = 630
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 194/275 (70%), Positives = 230/275 (83%), Gaps = 4/275 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD +KG+PIRIMWSQRDPSLRKSGVGNVFIKNLDKSI
Sbjct: 53 GYAYVNFQQP--ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFSAFG+ILSCKV DE G SKGY FVHFET++AA+++IEK+NGMLLN + VF
Sbjct: 111 DNKALYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQDAADRAIEKMNGMLLNDRKVF 169
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGK 241
VG+F RKERE ELG KAK FTNVYIKNFG+D +D +LKE+F YG S +VM + GK
Sbjct: 170 VGRFKSRKEREAELGAKAKEFTNVYIKNFGDDMDDGRLKELFSKYGKTLSVKVMTDPSGK 229
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
S+GFGFV++E E A KAV+ NGK+++GK+++VGRAQKK ER ELKR+FE LK ER++
Sbjct: 230 SKGFGFVSFEKHEDANKAVEEMNGKDINGKMVFVGRAQKKVERQAELKRKFEQLKQERIS 289
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLY+KNLDD+IDDE+LRKEF+PFG+ITSAK
Sbjct: 290 RYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAK 324
Score = 161 bits (407), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 85/191 (44%), Positives = 118/191 (61%), Gaps = 10/191 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV+IKN +D+ + + FS +G LS KV D G SKG+GFV FE E ANK++E++
Sbjct: 192 NVYIKNFGDDMDDGRLKELFSKYGKTLSVKVMTDPSGKSKGFGFVSFEKHEDANKAVEEM 251
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKLK 221
NG +N K+VFVG+ + ER+ EL K + N+YIKN + +DEKL+
Sbjct: 252 NGKDINGKMVFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLR 311
Query: 222 EMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKK 281
+ F P+G+ITS +VM DG+S+GFGFV + SP+ A KAV NG+ V K LYV AQ+K
Sbjct: 312 KEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPDEATKAVTEMNGRIVGSKPLYVALAQRK 371
Query: 282 AERTQELKRRF 292
ER L ++
Sbjct: 372 EERKAHLTNQY 382
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 122/228 (53%), Gaps = 17/228 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + +Y+ FS G +LS +V +D S GY +V+F+ A +++
Sbjct: 10 MASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERAL 69
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N ++ K + I +R+ L + NV+IKN + +++ L + F +G
Sbjct: 70 DTMNFDVIKGKPI----RIMWSQRDPSLRKSG--VGNVFIKNLDKSIDNKALYDTFSAFG 123
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S +V+ ++ S+G+ FV +E+ + A++A++ NG ++ + ++VGR + + ER EL
Sbjct: 124 NILSCKVVCDENGSKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSRKEREAEL 183
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ + N+Y+KN D +DD RL++ F+ +G S K
Sbjct: 184 GAKAKEF----------TNVYIKNFGDDMDDGRLKELFSKYGKTLSVK 221
>gi|119612222|gb|EAW91816.1| poly(A) binding protein, cytoplasmic 1, isoform CRA_c [Homo
sapiens]
gi|119612227|gb|EAW91821.1| poly(A) binding protein, cytoplasmic 1, isoform CRA_c [Homo
sapiens]
Length = 419
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 196/275 (71%), Positives = 229/275 (83%), Gaps = 4/275 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD +KG+P+RIMWSQRDPSLRKSGVGN+FIKNLDKSI
Sbjct: 53 GYAYVNFQQP--ADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFSAFG+ILSCKV DE G SKGYGFVHFET+EAA ++IEK+NGMLLN + VF
Sbjct: 111 DNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVF 169
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GK 241
VG+F RKERE ELG +AK FTNVYIKNFGED +DE+LK++F +G S +VM ++ GK
Sbjct: 170 VGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGK 229
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
S+GFGFV++E E A+KAV NGKE++GK +YVGRAQKK ER ELKR+FE +K +R+
Sbjct: 230 SKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRIT 289
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLYVKNLDD IDDERLRKEF+PFGTITSAK
Sbjct: 290 RYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAK 324
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 93/232 (40%), Positives = 133/232 (57%), Gaps = 16/232 (6%)
Query: 77 TERALDTMNFDALKGRPIRI----MWSQRDPSL--RKSGVGNVFIKNLDKSIDNKAMYDT 130
ERA++ MN L R + + +R+ L R NV+IKN + +D++ + D
Sbjct: 151 AERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDL 210
Query: 131 FSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRK 190
F FG LS KV DE G SKG+GFV FE E A K+++++NG LN K ++VG+ +
Sbjct: 211 FGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKV 270
Query: 191 EREKELGEKAKLF----------TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDG 240
ER+ EL K + N+Y+KN + +DE+L++ F P+GTITS +VM G
Sbjct: 271 ERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGG 330
Query: 241 KSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRF 292
+S+GFGFV + SPE A KAV NG+ V K LYV AQ+K ER L ++
Sbjct: 331 RSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAHLTNQY 382
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 125/236 (52%), Gaps = 17/236 (7%)
Query: 102 DPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFET 160
+PS + ++++ +L + +Y+ FS G ILS +V +D S GY +V+F+
Sbjct: 2 NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 161 EEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKL 220
A ++++ +N ++ K V I +R+ L + N++IKN + +++ L
Sbjct: 62 PADAERALDTMNFDVIKGKPV----RIMWSQRDPSLRKSG--VGNIFIKNLDKSIDNKAL 115
Query: 221 KEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
+ F +G I S +V+ ++ S+G+GFV +E+ E AE+A++ NG ++ + ++VGR +
Sbjct: 116 YDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKS 175
Query: 281 KAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ ER EL R + N+Y+KN + +DDERL+ F FG S K
Sbjct: 176 RKEREAELGARAKEF----------TNVYIKNFGEDMDDERLKDLFGKFGPALSVK 221
>gi|410899897|ref|XP_003963433.1| PREDICTED: embryonic polyadenylate-binding protein-like [Takifugu
rubripes]
Length = 606
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 194/275 (70%), Positives = 228/275 (82%), Gaps = 4/275 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G + QP D E ALDTMN+D +KGRPIRIMWSQRDP LRKSGVGN+FIKN+D+SI
Sbjct: 53 GYAYINFQQP--ADAECALDTMNYDVIKGRPIRIMWSQRDPGLRKSGVGNIFIKNMDESI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFSAFG+ILSCKV DE+G SKGYGFVHFETEEAAN++IE +NGMLLN + VF
Sbjct: 111 DNKALYDTFSAFGNILSCKVVCDERG-SKGYGFVHFETEEAANRAIETMNGMLLNDRKVF 169
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GK 241
VG F RKERE+ELG KA FTN+YIKNFGED+NDEKLKE+F +G S RVM ++ G+
Sbjct: 170 VGHFKSRKEREEELGSKALKFTNIYIKNFGEDYNDEKLKEVFAAFGRTLSVRVMKDERGR 229
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
SRGFGFV + E A+KAV NGKE++GK++YVGRAQK+ ER ELKR+FE++K +R+
Sbjct: 230 SRGFGFVNFAHHEDAQKAVDEMNGKELNGKVIYVGRAQKRLERQGELKRKFELIKQDRIQ 289
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLYVKNLDDSIDDERLRKEF P+GTITSAK
Sbjct: 290 RYQGVNLYVKNLDDSIDDERLRKEFAPYGTITSAK 324
Score = 160 bits (406), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 89/230 (38%), Positives = 138/230 (60%), Gaps = 16/230 (6%)
Query: 79 RALDTMNFDALKGRPIRI----MWSQRDPSLRKSGV--GNVFIKNLDKSIDNKAMYDTFS 132
RA++TMN L R + + +R+ L + N++IKN + +++ + + F+
Sbjct: 153 RAIETMNGMLLNDRKVFVGHFKSRKEREEELGSKALKFTNIYIKNFGEDYNDEKLKEVFA 212
Query: 133 AFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKER 192
AFG LS +V +DE+G S+G+GFV+F E A K+++++NG LN K+++VG+ R ER
Sbjct: 213 AFGRTLSVRVMKDERGRSRGFGFVNFAHHEDAQKAVDEMNGKELNGKVIYVGRAQKRLER 272
Query: 193 EKELGEKAKLF----------TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDGKS 242
+ EL K +L N+Y+KN + +DE+L++ F PYGTITS +VM + +S
Sbjct: 273 QGELKRKFELIKQDRIQRYQGVNLYVKNLDDSIDDERLRKEFAPYGTITSAKVMTDGPQS 332
Query: 243 RGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRF 292
RGFGFV + SPE A KAV NG+ V K LYV AQ++ ER L ++
Sbjct: 333 RGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRREERKAILTNKY 382
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 64/137 (46%), Gaps = 20/137 (14%)
Query: 203 FTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAV 260
++Y+ + D + L + F P G I S RV + +S G+ ++ ++ P AE A+
Sbjct: 10 LASLYVGDLHPDVTEAMLYQKFSPAGPIMSIRVCRDIITRRSLGYAYINFQQPADAECAL 69
Query: 261 QAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGV-NLYVKNLDDSIDD 319
N + G+ + + +Q+ R GV N+++KN+D+SID+
Sbjct: 70 DTMNYDVIKGRPIRIMWSQRDPGL-----------------RKSGVGNIFIKNMDESIDN 112
Query: 320 ERLRKEFTPFGTITSAK 336
+ L F+ FG I S K
Sbjct: 113 KALYDTFSAFGNILSCK 129
>gi|348502707|ref|XP_003438909.1| PREDICTED: embryonic polyadenylate-binding protein-like
[Oreochromis niloticus]
Length = 623
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 196/275 (71%), Positives = 224/275 (81%), Gaps = 4/275 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D E ALDTMN+D +KGRPIRIMWSQRDP LRKSGVGN+FIKN+D+SI
Sbjct: 53 GYAYVNFQQP--ADAECALDTMNYDVIKGRPIRIMWSQRDPGLRKSGVGNIFIKNMDESI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFSAFG+ILSCKV DE+G SKGYGFVHFET+EAAN++IE +NGMLLN + VF
Sbjct: 111 DNKALYDTFSAFGNILSCKVVCDEKG-SKGYGFVHFETQEAANRAIETMNGMLLNDRKVF 169
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GK 241
VG F RKERE E G KA FTNVYIKNFGEDF DEKLKE+F +G S RVM ++ G+
Sbjct: 170 VGHFKSRKEREVEFGSKAMKFTNVYIKNFGEDFTDEKLKEVFSAFGRTLSVRVMKDEKGR 229
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
SRGFGFV Y E A+KAV NGKE++GKILYVGRAQK+ ER ELKR+F+ +K +R+
Sbjct: 230 SRGFGFVNYAHHEDAQKAVNEMNGKEINGKILYVGRAQKRLERQGELKRKFDQIKQDRIQ 289
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLYVKNLDDSIDDERLRKEF P+GTITSAK
Sbjct: 290 RYQGVNLYVKNLDDSIDDERLRKEFAPYGTITSAK 324
Score = 154 bits (388), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 79/191 (41%), Positives = 118/191 (61%), Gaps = 10/191 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV+IKN + ++ + + FSAFG LS +V +DE+G S+G+GFV++ E A K++ ++
Sbjct: 192 NVYIKNFGEDFTDEKLKEVFSAFGRTLSVRVMKDEKGRSRGFGFVNYAHHEDAQKAVNEM 251
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKLK 221
NG +N KI++VG+ R ER+ EL K N+Y+KN + +DE+L+
Sbjct: 252 NGKEINGKILYVGRAQKRLERQGELKRKFDQIKQDRIQRYQGVNLYVKNLDDSIDDERLR 311
Query: 222 EMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKK 281
+ F PYGTITS +VM + +S+GFGFV + SPE A KAV NG+ V K LYV AQ++
Sbjct: 312 KEFAPYGTITSAKVMTDGSQSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRR 371
Query: 282 AERTQELKRRF 292
ER L ++
Sbjct: 372 EERKAILTNKY 382
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 65/140 (46%), Gaps = 20/140 (14%)
Query: 200 AKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAE 257
A ++Y+ + D + L + F P G I S RV + +S G+ +V ++ P AE
Sbjct: 7 AYPLASLYVGDLHPDVTEAMLYQKFSPAGPIMSIRVCRDIITRRSLGYAYVNFQQPADAE 66
Query: 258 KAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGV-NLYVKNLDDS 316
A+ N + G+ + + +Q+ R GV N+++KN+D+S
Sbjct: 67 CALDTMNYDVIKGRPIRIMWSQRDPGL-----------------RKSGVGNIFIKNMDES 109
Query: 317 IDDERLRKEFTPFGTITSAK 336
ID++ L F+ FG I S K
Sbjct: 110 IDNKALYDTFSAFGNILSCK 129
>gi|119612224|gb|EAW91818.1| poly(A) binding protein, cytoplasmic 1, isoform CRA_d [Homo
sapiens]
Length = 472
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 196/275 (71%), Positives = 229/275 (83%), Gaps = 4/275 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD +KG+P+RIMWSQRDPSLRKSGVGN+FIKNLDKSI
Sbjct: 53 GYAYVNFQQP--ADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFSAFG+ILSCKV DE G SKGYGFVHFET+EAA ++IEK+NGMLLN + VF
Sbjct: 111 DNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVF 169
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GK 241
VG+F RKERE ELG +AK FTNVYIKNFGED +DE+LK++F +G S +VM ++ GK
Sbjct: 170 VGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGK 229
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
S+GFGFV++E E A+KAV NGKE++GK +YVGRAQKK ER ELKR+FE +K +R+
Sbjct: 230 SKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRIT 289
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLYVKNLDD IDDERLRKEF+PFGTITSAK
Sbjct: 290 RYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAK 324
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 93/232 (40%), Positives = 133/232 (57%), Gaps = 16/232 (6%)
Query: 77 TERALDTMNFDALKGRPIRI----MWSQRDPSL--RKSGVGNVFIKNLDKSIDNKAMYDT 130
ERA++ MN L R + + +R+ L R NV+IKN + +D++ + D
Sbjct: 151 AERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDL 210
Query: 131 FSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRK 190
F FG LS KV DE G SKG+GFV FE E A K+++++NG LN K ++VG+ +
Sbjct: 211 FGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKV 270
Query: 191 EREKELGEKAKLF----------TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDG 240
ER+ EL K + N+Y+KN + +DE+L++ F P+GTITS +VM G
Sbjct: 271 ERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGG 330
Query: 241 KSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRF 292
+S+GFGFV + SPE A KAV NG+ V K LYV AQ+K ER L ++
Sbjct: 331 RSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAHLTNQY 382
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 125/236 (52%), Gaps = 17/236 (7%)
Query: 102 DPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFET 160
+PS + ++++ +L + +Y+ FS G ILS +V +D S GY +V+F+
Sbjct: 2 NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 161 EEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKL 220
A ++++ +N ++ K V I +R+ L + N++IKN + +++ L
Sbjct: 62 PADAERALDTMNFDVIKGKPV----RIMWSQRDPSLRKSG--VGNIFIKNLDKSIDNKAL 115
Query: 221 KEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
+ F +G I S +V+ ++ S+G+GFV +E+ E AE+A++ NG ++ + ++VGR +
Sbjct: 116 YDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKS 175
Query: 281 KAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ ER EL R + N+Y+KN + +DDERL+ F FG S K
Sbjct: 176 RKEREAELGARAKEF----------TNVYIKNFGEDMDDERLKDLFGKFGPALSVK 221
>gi|22507391|ref|NP_683717.1| polyadenylate-binding protein 4 isoform 2 [Mus musculus]
gi|16307591|gb|AAH10345.1| Poly(A) binding protein, cytoplasmic 4 [Mus musculus]
Length = 615
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 196/275 (71%), Positives = 228/275 (82%), Gaps = 4/275 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD +KG+PIRIMWSQRDPSLRKSGVGNVFIKNLDKSI
Sbjct: 53 GYAYVNFQQP--ADAERALDTMNFDVMKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFSAFG+ILSCKV DE G SKGY FVHFET+EAA+K+IEK+NGMLLN + VF
Sbjct: 111 DNKALYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVF 169
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGK 241
VG+F RKERE ELG KAK FTNVYIKNFGE+ +D LKE+F +G S +VM ++ GK
Sbjct: 170 VGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDGNLKELFSQFGKTLSVKVMRDSSGK 229
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
S+GFGFV+YE E A KAV+ NGKE+ GK ++VGRAQKK ER ELKR+FE LK ER++
Sbjct: 230 SKGFGFVSYEKHEDANKAVEEMNGKEMSGKAIFVGRAQKKVERQAELKRKFEQLKQERIS 289
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLY+KNLDD+IDDE+LR+EF+PFG+ITSAK
Sbjct: 290 RYQGVNLYIKNLDDTIDDEKLRREFSPFGSITSAK 324
Score = 160 bits (406), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 84/191 (43%), Positives = 118/191 (61%), Gaps = 10/191 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV+IKN + +D+ + + FS FG LS KV +D G SKG+GFV +E E ANK++E++
Sbjct: 192 NVYIKNFGEEVDDGNLKELFSQFGKTLSVKVMRDSSGKSKGFGFVSYEKHEDANKAVEEM 251
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKLK 221
NG ++ K +FVG+ + ER+ EL K + N+YIKN + +DEKL+
Sbjct: 252 NGKEMSGKAIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLR 311
Query: 222 EMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKK 281
F P+G+ITS +VM DG+S+GFGFV + SPE A KAV NG+ V K LYV AQ+K
Sbjct: 312 REFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRK 371
Query: 282 AERTQELKRRF 292
ER L ++
Sbjct: 372 EERKAHLTNQY 382
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 121/228 (53%), Gaps = 17/228 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + +Y+ FS G +LS +V +D S GY +V+F+ A +++
Sbjct: 10 MASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERAL 69
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N ++ K + I +R+ L + NV+IKN + +++ L + F +G
Sbjct: 70 DTMNFDVMKGKPI----RIMWSQRDPSLRKSG--VGNVFIKNLDKSIDNKALYDTFSAFG 123
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S +V+ ++ S+G+ FV +E+ E A+KA++ NG ++ + ++VGR + + ER EL
Sbjct: 124 NILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAEL 183
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ + N+Y+KN + +DD L++ F+ FG S K
Sbjct: 184 GAKAKEF----------TNVYIKNFGEEVDDGNLKELFSQFGKTLSVK 221
>gi|126330207|ref|XP_001365338.1| PREDICTED: polyadenylate-binding protein 4 isoform 2 [Monodelphis
domestica]
Length = 614
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 194/275 (70%), Positives = 230/275 (83%), Gaps = 4/275 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD +KG+PIRIMWSQRDPSLRKSGVGNVFIKNLDKSI
Sbjct: 53 GYAYVNFQQP--ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFSAFG+ILSCKV DE G SKGY FVHFET++AA+++IEK+NGMLLN + VF
Sbjct: 111 DNKALYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQDAADRAIEKMNGMLLNDRKVF 169
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGK 241
VG+F RKERE ELG KAK FTNVYIKNFG+D +D +LKE+F YG S +VM + GK
Sbjct: 170 VGRFKSRKEREAELGAKAKEFTNVYIKNFGDDMDDGRLKELFSKYGKTLSVKVMTDPSGK 229
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
S+GFGFV++E E A KAV+ NGK+++GK+++VGRAQKK ER ELKR+FE LK ER++
Sbjct: 230 SKGFGFVSFEKHEDANKAVEEMNGKDINGKMVFVGRAQKKVERQAELKRKFEQLKQERIS 289
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLY+KNLDD+IDDE+LRKEF+PFG+ITSAK
Sbjct: 290 RYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAK 324
Score = 161 bits (407), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 85/191 (44%), Positives = 118/191 (61%), Gaps = 10/191 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV+IKN +D+ + + FS +G LS KV D G SKG+GFV FE E ANK++E++
Sbjct: 192 NVYIKNFGDDMDDGRLKELFSKYGKTLSVKVMTDPSGKSKGFGFVSFEKHEDANKAVEEM 251
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKLK 221
NG +N K+VFVG+ + ER+ EL K + N+YIKN + +DEKL+
Sbjct: 252 NGKDINGKMVFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLR 311
Query: 222 EMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKK 281
+ F P+G+ITS +VM DG+S+GFGFV + SP+ A KAV NG+ V K LYV AQ+K
Sbjct: 312 KEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPDEATKAVTEMNGRIVGSKPLYVALAQRK 371
Query: 282 AERTQELKRRF 292
ER L ++
Sbjct: 372 EERKAHLTNQY 382
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 122/228 (53%), Gaps = 17/228 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + +Y+ FS G +LS +V +D S GY +V+F+ A +++
Sbjct: 10 MASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERAL 69
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N ++ K + I +R+ L + NV+IKN + +++ L + F +G
Sbjct: 70 DTMNFDVIKGKPI----RIMWSQRDPSLRKSG--VGNVFIKNLDKSIDNKALYDTFSAFG 123
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S +V+ ++ S+G+ FV +E+ + A++A++ NG ++ + ++VGR + + ER EL
Sbjct: 124 NILSCKVVCDENGSKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSRKEREAEL 183
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ + N+Y+KN D +DD RL++ F+ +G S K
Sbjct: 184 GAKAKEF----------TNVYIKNFGDDMDDGRLKELFSKYGKTLSVK 221
>gi|194381714|dbj|BAG64226.1| unnamed protein product [Homo sapiens]
Length = 591
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 194/275 (70%), Positives = 227/275 (82%), Gaps = 4/275 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD +KG+P+RIMWSQRDP LRKSGVGN+FIKNLDKSI
Sbjct: 8 GYAYVNFQQP--ADAERALDTMNFDVIKGKPVRIMWSQRDPPLRKSGVGNIFIKNLDKSI 65
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFSAFG+ILSCKV DE G SKGYGFVHFET+EAA ++IEK+NGMLLN + V
Sbjct: 66 DNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVS 124
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GK 241
VG+F RKERE ELG +AK FTNVYIKNFGED +DE+LK++F +G S +VM ++ GK
Sbjct: 125 VGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGK 184
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
S+GFGFV++E E A+KAV NGKE++GK +YVGRAQKK ER ELKR+FE +K +R+
Sbjct: 185 SKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRIT 244
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLYVKNLDD IDDERLRKEF+PFGTITSAK
Sbjct: 245 RYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAK 279
Score = 161 bits (408), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 93/232 (40%), Positives = 133/232 (57%), Gaps = 16/232 (6%)
Query: 77 TERALDTMNFDALKGRPIRI----MWSQRDPSL--RKSGVGNVFIKNLDKSIDNKAMYDT 130
ERA++ MN L R + + +R+ L R NV+IKN + +D++ + D
Sbjct: 106 AERAIEKMNGMLLNDRKVSVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDL 165
Query: 131 FSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRK 190
F FG LS KV DE G SKG+GFV FE E A K+++++NG LN K ++VG+ +
Sbjct: 166 FGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKV 225
Query: 191 EREKELGEKAKLF----------TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDG 240
ER+ EL K + N+Y+KN + +DE+L++ F P+GTITS +VM G
Sbjct: 226 ERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGG 285
Query: 241 KSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRF 292
+S+GFGFV + SPE A KAV NG+ V K LYV AQ+K ER L ++
Sbjct: 286 RSKGFGFVCFSSPEEATKAVTGMNGRIVATKPLYVALAQRKEERQAHLTNQY 337
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 100/187 (53%), Gaps = 16/187 (8%)
Query: 150 SKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIK 209
S GY +V+F+ A ++++ +N ++ K V I +R+ L + N++IK
Sbjct: 6 SLGYAYVNFQQPADAERALDTMNFDVIKGKPV----RIMWSQRDPPLRKSG--VGNIFIK 59
Query: 210 NFGEDFNDEKLKEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVD 269
N + +++ L + F +G I S +V+ ++ S+G+GFV +E+ E AE+A++ NG ++
Sbjct: 60 NLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNGMLLN 119
Query: 270 GKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPF 329
+ + VGR + + ER EL R + N+Y+KN + +DDERL+ F F
Sbjct: 120 DRKVSVGRFKSRKEREAELGARAKEF----------TNVYIKNFGEDMDDERLKDLFGKF 169
Query: 330 GTITSAK 336
G S K
Sbjct: 170 GPALSVK 176
>gi|383417507|gb|AFH31967.1| polyadenylate-binding protein 1 [Macaca mulatta]
gi|383417511|gb|AFH31969.1| polyadenylate-binding protein 1 [Macaca mulatta]
Length = 459
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 196/275 (71%), Positives = 229/275 (83%), Gaps = 4/275 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD +KG+P+RIMWSQRDPSLRKSGVGN+FIKNLDKSI
Sbjct: 53 GYAYVNFQQP--ADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFSAFG+ILSCKV DE G SKGYGFVHFET+EAA ++IEK+NGMLLN + VF
Sbjct: 111 DNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVF 169
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GK 241
VG+F RKERE ELG +AK FTNVYIKNFGED +DE+LK++F +G S +VM ++ GK
Sbjct: 170 VGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGK 229
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
S+GFGFV++E E A+KAV NGKE++GK +YVGRAQKK ER ELKR+FE +K +R+
Sbjct: 230 SKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRIT 289
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLYVKNLDD IDDERLRKEF+PFGTITSAK
Sbjct: 290 RYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAK 324
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 93/232 (40%), Positives = 133/232 (57%), Gaps = 16/232 (6%)
Query: 77 TERALDTMNFDALKGRPIRI----MWSQRDPSL--RKSGVGNVFIKNLDKSIDNKAMYDT 130
ERA++ MN L R + + +R+ L R NV+IKN + +D++ + D
Sbjct: 151 AERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDL 210
Query: 131 FSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRK 190
F FG LS KV DE G SKG+GFV FE E A K+++++NG LN K ++VG+ +
Sbjct: 211 FGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKV 270
Query: 191 EREKELGEKAKLF----------TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDG 240
ER+ EL K + N+Y+KN + +DE+L++ F P+GTITS +VM G
Sbjct: 271 ERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGG 330
Query: 241 KSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRF 292
+S+GFGFV + SPE A KAV NG+ V K LYV AQ+K ER L ++
Sbjct: 331 RSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAHLTNQY 382
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 125/236 (52%), Gaps = 17/236 (7%)
Query: 102 DPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFET 160
+PS + ++++ +L + +Y+ FS G ILS +V +D S GY +V+F+
Sbjct: 2 NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 161 EEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKL 220
A ++++ +N ++ K V I +R+ L + N++IKN + +++ L
Sbjct: 62 PADAERALDTMNFDVIKGKPV----RIMWSQRDPSLRKSG--VGNIFIKNLDKSIDNKAL 115
Query: 221 KEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
+ F +G I S +V+ ++ S+G+GFV +E+ E AE+A++ NG ++ + ++VGR +
Sbjct: 116 YDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKS 175
Query: 281 KAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ ER EL R + N+Y+KN + +DDERL+ F FG S K
Sbjct: 176 RKEREAELGARAKEF----------TNVYIKNFGEDMDDERLKDLFGKFGPALSVK 221
>gi|426360413|ref|XP_004047438.1| PREDICTED: polyadenylate-binding protein 1 [Gorilla gorilla
gorilla]
Length = 682
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 191/261 (73%), Positives = 224/261 (85%), Gaps = 2/261 (0%)
Query: 77 TERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGS 136
ERALDTMNFD +KG+P+RIMWSQRDPSLRKSGVGN+FIKNLDKSIDNKA+YDTFSAFG+
Sbjct: 111 AERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGN 170
Query: 137 ILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKEL 196
ILSCKV DE G SKGYGFVHFET+EAA ++IEK+NGMLLN + VFVG+F RKERE EL
Sbjct: 171 ILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAEL 229
Query: 197 GEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEF 255
G +AK FTNVYIKNFGED +DE+LK++F +G S +VM ++ GKS+GFGFV++E E
Sbjct: 230 GARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHED 289
Query: 256 AEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDD 315
A+KAV NGKE++GK +YVGRAQKK ER ELKR+FE +K +R+ RYQGVNLYVKNLDD
Sbjct: 290 AQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDD 349
Query: 316 SIDDERLRKEFTPFGTITSAK 336
IDDERLRKEF+PFGTITSAK
Sbjct: 350 GIDDERLRKEFSPFGTITSAK 370
Score = 234 bits (596), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 126/278 (45%), Positives = 172/278 (61%), Gaps = 36/278 (12%)
Query: 84 MNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVA 143
MNFD +KG+P+RIMWSQRDPSLRKSGVGN+FIKNLDKSIDNKA+YDTFSAFG+ILSCKV
Sbjct: 1 MNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVV 60
Query: 144 QDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKF-----IPRKEREKEL-- 196
DE G SKGYGFVHFET+EAA ++IEK+NGMLLN P ER +
Sbjct: 61 CDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNXXXXEASNIDSENVFPAAERALDTMN 119
Query: 197 -----GEKAKLF-------------TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN 238
G+ ++ N++IKN + +++ L + F +G I S +V+ +
Sbjct: 120 FDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD 179
Query: 239 DGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIE 298
+ S+G+GFV +E+ E AE+A++ NG ++ + ++VGR + + ER EL R +
Sbjct: 180 ENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEF--- 236
Query: 299 RLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
N+Y+KN + +DDERL+ F FG S K
Sbjct: 237 -------TNVYIKNFGEDMDDERLKDLFGKFGPALSVK 267
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 93/232 (40%), Positives = 133/232 (57%), Gaps = 16/232 (6%)
Query: 77 TERALDTMNFDALKGRPIRI----MWSQRDPSL--RKSGVGNVFIKNLDKSIDNKAMYDT 130
ERA++ MN L R + + +R+ L R NV+IKN + +D++ + D
Sbjct: 197 AERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDL 256
Query: 131 FSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRK 190
F FG LS KV DE G SKG+GFV FE E A K+++++NG LN K ++VG+ +
Sbjct: 257 FGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKV 316
Query: 191 EREKELGEKAKLF----------TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDG 240
ER+ EL K + N+Y+KN + +DE+L++ F P+GTITS +VM G
Sbjct: 317 ERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGG 376
Query: 241 KSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRF 292
+S+GFGFV + SPE A KAV NG+ V K LYV AQ+K ER L ++
Sbjct: 377 RSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAHLTNQY 428
>gi|432095458|gb|ELK26654.1| Polyadenylate-binding protein 4 [Myotis davidii]
Length = 657
Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust.
Identities = 192/263 (73%), Positives = 224/263 (85%), Gaps = 2/263 (0%)
Query: 75 LDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAF 134
L ERALDTMNFD +KG+PIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKA+YDTFSAF
Sbjct: 59 LVAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAF 118
Query: 135 GSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREK 194
G+ILSCKV DE G SKGY FVHFET+EAA+K+IEK+NGMLLN + VFVG+F RKERE
Sbjct: 119 GNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREA 177
Query: 195 ELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GKSRGFGFVAYESP 253
ELG KAK FTNVYIKNFGE+ +DE LKE+F +G S +VM + GKS+GFGFV+YE
Sbjct: 178 ELGAKAKEFTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPTGKSKGFGFVSYEKH 237
Query: 254 EFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNL 313
E A KAV+ NGKE+ GK+++VGRAQKK ER ELKR+FE LK ER++RYQGVNLY+KNL
Sbjct: 238 EDANKAVEEMNGKEISGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNL 297
Query: 314 DDSIDDERLRKEFTPFGTITSAK 336
DD+IDDE+LRKEF+PFG+IT A+
Sbjct: 298 DDTIDDEKLRKEFSPFGSITRAE 320
Score = 161 bits (408), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 83/191 (43%), Positives = 120/191 (62%), Gaps = 10/191 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV+IKN + +D++++ + FS FG LS KV +D G SKG+GFV +E E ANK++E++
Sbjct: 188 NVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPTGKSKGFGFVSYEKHEDANKAVEEM 247
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKLK 221
NG ++ K++FVG+ + ER+ EL K + N+YIKN + +DEKL+
Sbjct: 248 NGKEISGKVIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLR 307
Query: 222 EMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKK 281
+ F P+G+IT VM DG+S+GFGFV + SPE A KAV NG+ V K LYV AQ+K
Sbjct: 308 KEFSPFGSITRAEVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRK 367
Query: 282 AERTQELKRRF 292
ER L ++
Sbjct: 368 EERKAHLTNQY 378
>gi|297283068|ref|XP_001113342.2| PREDICTED: polyadenylate-binding protein 4 [Macaca mulatta]
Length = 657
Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust.
Identities = 198/275 (72%), Positives = 227/275 (82%), Gaps = 7/275 (2%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD +KG+PIRIMWSQRDPSLRKSGVGNVFIKNLDKSI
Sbjct: 53 GYAYVNFQQP--ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFSAFG+ILSCKV DE G SKGY FVHFET+EAA+K+IEK+NGMLLN + VF
Sbjct: 111 DNKALYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVF 169
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGK 241
VG+F RKERE ELG KAK FTNVYIKNFGE+ +DE LKE+F S +VM + GK
Sbjct: 170 VGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDESLKELFS---KTLSVKVMRDPSGK 226
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
S+GFGFV+YE E A KAV+ NGKE+ GKI++VGRAQKK ER ELKR+FE LK ER++
Sbjct: 227 SKGFGFVSYEKHEDANKAVEEMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERIS 286
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLY+KNLDD+IDDE+LRKEF+PFG+ITSAK
Sbjct: 287 RYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAK 321
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 83/191 (43%), Positives = 120/191 (62%), Gaps = 13/191 (6%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV+IKN + +D++++ + FS LS KV +D G SKG+GFV +E E ANK++E++
Sbjct: 192 NVYIKNFGEEVDDESLKELFS---KTLSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEM 248
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKLK 221
NG ++ KI+FVG+ + ER+ EL K + N+YIKN + +DEKL+
Sbjct: 249 NGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLR 308
Query: 222 EMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKK 281
+ F P+G+ITS +VM DG+S+GFGFV + SPE A KAV NG+ V K LYV AQ+K
Sbjct: 309 KEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRK 368
Query: 282 AERTQELKRRF 292
ER L ++
Sbjct: 369 EERKAHLTNQY 379
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 118/219 (53%), Gaps = 17/219 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + +Y+ FS G +LS +V +D S GY +V+F+ A +++
Sbjct: 10 MASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERAL 69
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N ++ K + I +R+ L + NV+IKN + +++ L + F +G
Sbjct: 70 DTMNFDVIKGKPI----RIMWSQRDPSLRKSG--VGNVFIKNLDKSIDNKALYDTFSAFG 123
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S +V+ ++ S+G+ FV +E+ E A+KA++ NG ++ + ++VGR + + ER EL
Sbjct: 124 NILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAEL 183
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFT 327
+ + N+Y+KN + +DDE L++ F+
Sbjct: 184 GAKAKEF----------TNVYIKNFGEEVDDESLKELFS 212
>gi|148698436|gb|EDL30383.1| mCG5546, isoform CRA_b [Mus musculus]
Length = 580
Score = 396 bits (1018), Expect = e-108, Method: Compositional matrix adjust.
Identities = 196/275 (71%), Positives = 228/275 (82%), Gaps = 4/275 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD +KG+PIRIMWSQRDPSLRKSGVGNVFIKNLDKSI
Sbjct: 70 GYAYVNFQQP--ADAERALDTMNFDVMKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 127
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFSAFG+ILSCKV DE G SKGY FVHFET+EAA+K+IEK+NGMLLN + VF
Sbjct: 128 DNKALYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVF 186
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGK 241
VG+F RKERE ELG KAK FTNVYIKNFGE+ +D LKE+F +G S +VM ++ GK
Sbjct: 187 VGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDGNLKELFSQFGKTLSVKVMRDSSGK 246
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
S+GFGFV+YE E A KAV+ NGKE+ GK ++VGRAQKK ER ELKR+FE LK ER++
Sbjct: 247 SKGFGFVSYEKHEDANKAVEEMNGKEMSGKAIFVGRAQKKVERQAELKRKFEQLKQERIS 306
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLY+KNLDD+IDDE+LR+EF+PFG+ITSAK
Sbjct: 307 RYQGVNLYIKNLDDTIDDEKLRREFSPFGSITSAK 341
Score = 160 bits (405), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 84/191 (43%), Positives = 118/191 (61%), Gaps = 10/191 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV+IKN + +D+ + + FS FG LS KV +D G SKG+GFV +E E ANK++E++
Sbjct: 209 NVYIKNFGEEVDDGNLKELFSQFGKTLSVKVMRDSSGKSKGFGFVSYEKHEDANKAVEEM 268
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKLK 221
NG ++ K +FVG+ + ER+ EL K + N+YIKN + +DEKL+
Sbjct: 269 NGKEMSGKAIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLR 328
Query: 222 EMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKK 281
F P+G+ITS +VM DG+S+GFGFV + SPE A KAV NG+ V K LYV AQ+K
Sbjct: 329 REFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRK 388
Query: 282 AERTQELKRRF 292
ER L ++
Sbjct: 389 EERKAHLTNQY 399
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 121/228 (53%), Gaps = 17/228 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + +Y+ FS G +LS +V +D S GY +V+F+ A +++
Sbjct: 27 MASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERAL 86
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N ++ K + I +R+ L + NV+IKN + +++ L + F +G
Sbjct: 87 DTMNFDVMKGKPI----RIMWSQRDPSLRKSG--VGNVFIKNLDKSIDNKALYDTFSAFG 140
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S +V+ ++ S+G+ FV +E+ E A+KA++ NG ++ + ++VGR + + ER EL
Sbjct: 141 NILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAEL 200
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ + N+Y+KN + +DD L++ F+ FG S K
Sbjct: 201 GAKAKEF----------TNVYIKNFGEEVDDGNLKELFSQFGKTLSVK 238
>gi|344236474|gb|EGV92577.1| Polyadenylate-binding protein 4 [Cricetulus griseus]
Length = 524
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 197/275 (71%), Positives = 228/275 (82%), Gaps = 4/275 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD +KG+PIRIMWSQRDPSLRKSGVGNVFIKNLDKSI
Sbjct: 44 GYAYVNFQQP--ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 101
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFSAFG+ILSCKV DE G SKGY FVHFET+EAA+K+IEK+NGMLLN + VF
Sbjct: 102 DNKALYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVF 160
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGK 241
VG+F RKERE ELG KAK FTNVYIKNFGE+ +D+ LKE+F +G S +VM + GK
Sbjct: 161 VGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDDNLKELFSQFGKTLSVKVMRDPSGK 220
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
S+GFGFV+YE E A KAV+ NGKE+ GK ++VGRAQKK ER ELKR+FE LK ER++
Sbjct: 221 SKGFGFVSYEKHEDANKAVEEMNGKEMSGKAIFVGRAQKKVERQAELKRKFEQLKQERIS 280
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLY+KNLDD+IDDE+LRKEF+PFG+ITSAK
Sbjct: 281 RYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAK 315
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 84/191 (43%), Positives = 119/191 (62%), Gaps = 10/191 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV+IKN + +D+ + + FS FG LS KV +D G SKG+GFV +E E ANK++E++
Sbjct: 183 NVYIKNFGEEVDDDNLKELFSQFGKTLSVKVMRDPSGKSKGFGFVSYEKHEDANKAVEEM 242
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKLK 221
NG ++ K +FVG+ + ER+ EL K + N+YIKN + +DEKL+
Sbjct: 243 NGKEMSGKAIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLR 302
Query: 222 EMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKK 281
+ F P+G+ITS +VM DG+S+GFGFV + SPE A KAV NG+ V K LYV AQ+K
Sbjct: 303 KEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRK 362
Query: 282 AERTQELKRRF 292
ER L ++
Sbjct: 363 EERKAHLTNQY 373
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 122/228 (53%), Gaps = 17/228 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + +Y+ FS G +LS +V +D S GY +V+F+ A +++
Sbjct: 1 MASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERAL 60
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N ++ K + I +R+ L + NV+IKN + +++ L + F +G
Sbjct: 61 DTMNFDVIKGKPI----RIMWSQRDPSLRKSG--VGNVFIKNLDKSIDNKALYDTFSAFG 114
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S +V+ ++ S+G+ FV +E+ E A+KA++ NG ++ + ++VGR + + ER EL
Sbjct: 115 NILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAEL 174
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ + N+Y+KN + +DD+ L++ F+ FG S K
Sbjct: 175 GAKAKEF----------TNVYIKNFGEEVDDDNLKELFSQFGKTLSVK 212
>gi|328782034|ref|XP_396057.4| PREDICTED: polyadenylate-binding protein 1-like isoform 1 [Apis
mellifera]
Length = 601
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 202/276 (73%), Positives = 218/276 (78%), Gaps = 33/276 (11%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD +KGRPIRIMWSQRDPSLRKSGVGNVFIKNLDK+I
Sbjct: 53 GYAYVNFQQP--ADAERALDTMNFDMIKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKNI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKAMYDTFSAFG+ILSCKVAQDE G SKGYGFVHFETEEAANKSI++VNGMLLN K
Sbjct: 111 DNKAMYDTFSAFGNILSCKVAQDESGVSKGYGFVHFETEEAANKSIDRVNGMLLNGK--- 167
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGK 241
KNFGED D+KLKEMFE YGTITS++VM +DGK
Sbjct: 168 --------------------------KNFGEDMTDDKLKEMFEKYGTITSHKVMIKDDGK 201
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEV-DGKILYVGRAQKKAERTQELKRRFEMLKIERL 300
SRGFGFVA+E P+ AE+AV NGKEV +GK +YVGRAQKKAER QELKR+FE LK+ERL
Sbjct: 202 SRGFGFVAFEDPDAAEQAVLELNGKEVAEGKCMYVGRAQKKAERQQELKRKFEQLKLERL 261
Query: 301 NRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
NRYQGVNLYVKNLDDSIDDERLRKEF PFGTITSAK
Sbjct: 262 NRYQGVNLYVKNLDDSIDDERLRKEFAPFGTITSAK 297
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 68/188 (36%), Positives = 112/188 (59%), Gaps = 11/188 (5%)
Query: 116 KNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGM- 174
KN + + + + + F +G+I S KV + G S+G+GFV FE +AA +++ ++NG
Sbjct: 168 KNFGEDMTDDKLKEMFEKYGTITSHKVMIKDDGKSRGFGFVAFEDPDAAEQAVLELNGKE 227
Query: 175 LLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKLKEMF 224
+ K ++VG+ + ER++EL K + N+Y+KN + +DE+L++ F
Sbjct: 228 VAEGKCMYVGRAQKKAERQQELKRKFEQLKLERLNRYQGVNLYVKNLDDSIDDERLRKEF 287
Query: 225 EPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAER 284
P+GTITS +VM +G+S+GFGFV + +PE A KAV NG+ + K LYV AQ+K +R
Sbjct: 288 APFGTITSAKVMMEEGRSKGFGFVCFSAPEEATKAVTEMNGRIIVTKPLYVALAQRKEDR 347
Query: 285 TQELKRRF 292
L ++
Sbjct: 348 KAHLASQY 355
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 111/237 (46%), Gaps = 47/237 (19%)
Query: 102 DPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFET 160
+P + ++++ +L I +++ FS+ G +LS +V +D S GY +V+F+
Sbjct: 2 NPGAPNYPMASLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 161 EEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKL 220
A ++++ +N ++ + + I +R+ L + NV+IKN ++ +++ +
Sbjct: 62 PADAERALDTMNFDMIKGRPI----RIMWSQRDPSLRKSG--VGNVFIKNLDKNIDNKAM 115
Query: 221 KEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQ 279
+ F +G I S +V ++ G S+G+GFV +E+ E A K++ NG ++GK
Sbjct: 116 YDTFSAFGNILSCKVAQDESGVSKGYGFVHFETEEAANKSIDRVNGMLLNGK-------- 167
Query: 280 KKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
KN + + D++L++ F +GTITS K
Sbjct: 168 -------------------------------KNFGEDMTDDKLKEMFEKYGTITSHK 193
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 70/122 (57%), Gaps = 3/122 (2%)
Query: 106 RKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAAN 165
R GV N+++KNLD SID++ + F+ FG+I S KV +E G SKG+GFV F E A
Sbjct: 263 RYQGV-NLYVKNLDDSIDDERLRKEFAPFGTITSAKVMMEE-GRSKGFGFVCFSAPEEAT 320
Query: 166 KSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEK-AKLFTNVYIKNFGEDFNDEKLKEMF 224
K++ ++NG ++ +K ++V +++R+ L + + N+ ++ G+ F F
Sbjct: 321 KAVTEMNGRIIVTKPLYVALAQRKEDRKAHLASQYMQRLANMRMQQMGQIFQPGGAGNYF 380
Query: 225 EP 226
P
Sbjct: 381 VP 382
>gi|297263480|ref|XP_001096930.2| PREDICTED: polyadenylate-binding protein 3 [Macaca mulatta]
Length = 592
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 191/262 (72%), Positives = 224/262 (85%), Gaps = 2/262 (0%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D ERALDTMNFD +KG+P+RIMWSQRDPSLRKSGVGN+FIKNLDKSIDNKA+YDTFSAFG
Sbjct: 109 DAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFG 168
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCKV DE G SKGYGFVHFET+EAA ++IEK+NGMLLN + VFVG+F RKERE E
Sbjct: 169 NILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAE 227
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPE 254
LG +AK FTNVYIKNFGED +DE+LK++F +G S +V+ ++ GKS+GFGFV++E E
Sbjct: 228 LGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVVTDESGKSKGFGFVSFERHE 287
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A KAV NGKE++GK +YVGRAQKK ER ELKR+FE +K +R+ RYQGVNLYVKNLD
Sbjct: 288 DARKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLD 347
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
D IDDERLRKEF+PFGTITSAK
Sbjct: 348 DGIDDERLRKEFSPFGTITSAK 369
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 93/232 (40%), Positives = 133/232 (57%), Gaps = 16/232 (6%)
Query: 77 TERALDTMNFDALKGRPIRI----MWSQRDPSL--RKSGVGNVFIKNLDKSIDNKAMYDT 130
ERA++ MN L R + + +R+ L R NV+IKN + +D++ + D
Sbjct: 196 AERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDL 255
Query: 131 FSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRK 190
F FG LS KV DE G SKG+GFV FE E A K+++++NG LN K ++VG+ +
Sbjct: 256 FGKFGPALSVKVVTDESGKSKGFGFVSFERHEDARKAVDEMNGKELNGKQIYVGRAQKKV 315
Query: 191 EREKELGEKAKLF----------TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDG 240
ER+ EL K + N+Y+KN + +DE+L++ F P+GTITS +VM G
Sbjct: 316 ERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGG 375
Query: 241 KSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRF 292
+S+GFGFV + SPE A KAV NG+ V K LYV AQ+K ER L ++
Sbjct: 376 RSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAHLTNQY 427
>gi|444706057|gb|ELW47419.1| Polyadenylate-binding protein 1 [Tupaia chinensis]
Length = 636
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 190/261 (72%), Positives = 222/261 (85%), Gaps = 2/261 (0%)
Query: 77 TERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGS 136
ERALDTMNFD +KG+P+RIMWSQRDPSLRKSGVGN+FIKNLDKSIDNKA+YDTFSAFG+
Sbjct: 65 AERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGN 124
Query: 137 ILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKEL 196
ILSCKV DE G SKGYGFVHFET+EAA + EK+NGMLLN + VFVG+F RKERE EL
Sbjct: 125 ILSCKVVCDENG-SKGYGFVHFETQEAAERVSEKMNGMLLNDRKVFVGRFKSRKEREAEL 183
Query: 197 GEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEF 255
G +AK FTNVYIKNFGED +DE+LK++F +G S +VM ++ GKS+GFGFV++E E
Sbjct: 184 GARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHED 243
Query: 256 AEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDD 315
A+KAV NGKE++GK +YVGRAQKK ER ELKR+FE +K +R+ RYQGVNLYVKNLDD
Sbjct: 244 AQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDD 303
Query: 316 SIDDERLRKEFTPFGTITSAK 336
IDDERLRKEF+PFGTITSAK
Sbjct: 304 GIDDERLRKEFSPFGTITSAK 324
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 83/191 (43%), Positives = 117/191 (61%), Gaps = 10/191 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV+IKN + +D++ + D F FG LS KV DE G SKG+GFV FE E A K+++++
Sbjct: 192 NVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEM 251
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKLK 221
NG LN K ++VG+ + ER+ EL K + N+Y+KN + +DE+L+
Sbjct: 252 NGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLR 311
Query: 222 EMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKK 281
+ F P+GTITS +VM G+S+GFGFV + SPE A KAV NG+ V K LYV AQ+K
Sbjct: 312 KEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRK 371
Query: 282 AERTQELKRRF 292
ER L ++
Sbjct: 372 EERQAHLTNQY 382
>gi|443722844|gb|ELU11546.1| hypothetical protein CAPTEDRAFT_164502 [Capitella teleta]
Length = 629
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 195/275 (70%), Positives = 228/275 (82%), Gaps = 4/275 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFDA+KGRPIRIMWSQRDPSLRKSGVGN+FIKNLDK+I
Sbjct: 54 GYAYVNFQQP--ADAERALDTMNFDAIKGRPIRIMWSQRDPSLRKSGVGNIFIKNLDKNI 111
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFSAFG+ILSCK+A D+ G S GYGFVHFETEEAA SIEKVNGMLLN K VF
Sbjct: 112 DNKALYDTFSAFGNILSCKIAMDQNG-SLGYGFVHFETEEAARNSIEKVNGMLLNGKKVF 170
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GK 241
VG+F+ RKER + LG+KAK FTNVY+KN E +D+KL+EMFE +G I S ++MN + G+
Sbjct: 171 VGRFMSRKERLEMLGDKAKKFTNVYVKNLNETMDDKKLREMFEVFGKIISAKMMNTEEGQ 230
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
RGFGFV+++ E A KAV+ N KEV+GK +YVGRAQKKAER ELK +FE +K+ER+N
Sbjct: 231 KRGFGFVSFDDHEAAAKAVEELNNKEVEGKEIYVGRAQKKAERQAELKEKFERMKMERIN 290
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLYVKNLD+ IDDERLRKEF+ FGTITSA+
Sbjct: 291 RYQGVNLYVKNLDEQIDDERLRKEFSQFGTITSAR 325
Score = 153 bits (387), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 83/207 (40%), Positives = 128/207 (61%), Gaps = 12/207 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV++KNL++++D+K + + F FG I+S K+ E+G +G+GFV F+ EAA K++E++
Sbjct: 193 NVYVKNLNETMDDKKLREMFEVFGKIISAKMMNTEEGQKRGFGFVSFDDHEAAAKAVEEL 252
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKLK 221
N + K ++VG+ + ER+ EL EK + N+Y+KN E +DE+L+
Sbjct: 253 NNKEVEGKEIYVGRAQKKAERQAELKEKFERMKMERINRYQGVNLYVKNLDEQIDDERLR 312
Query: 222 EMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKK 281
+ F +GTITS RVM G+++GFGFV + SPE A KAV NG+ V K LYV AQ+K
Sbjct: 313 KEFSQFGTITSARVMTEGGRTKGFGFVCFSSPEEATKAVTEMNGRIVVAKPLYVALAQRK 372
Query: 282 AERTQELKRRFEMLKIERLN-RYQGVN 307
+R L ++ M +I + + QGVN
Sbjct: 373 EDRKAHLAAQY-MQRIAGMRMQGQGVN 398
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 126/228 (55%), Gaps = 17/228 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + +++ FS G +LS +V +D S GY +V+F+ A +++
Sbjct: 11 MASLYVGDLHPDVTEAMLFEKFSTAGPVLSIRVCRDLITRRSLGYAYVNFQQPADAERAL 70
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N + + + I +R+ L + N++IKN ++ +++ L + F +G
Sbjct: 71 DTMNFDAIKGRPI----RIMWSQRDPSLRKSG--VGNIFIKNLDKNIDNKALYDTFSAFG 124
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S ++ + S G+GFV +E+ E A +++ NG ++GK ++VGR +
Sbjct: 125 NILSCKIAMDQNGSLGYGFVHFETEEAARNSIEKVNGMLLNGKKVFVGRFMSR------- 177
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
K R EML ++ ++ N+YVKNL++++DD++LR+ F FG I SAK
Sbjct: 178 KERLEMLG-DKAKKF--TNVYVKNLNETMDDKKLREMFEVFGKIISAK 222
>gi|350408508|ref|XP_003488428.1| PREDICTED: polyadenylate-binding protein 1-like isoform 3 [Bombus
impatiens]
Length = 601
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 201/276 (72%), Positives = 218/276 (78%), Gaps = 33/276 (11%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD +KGRPIRIMWSQRDPSLRKSGVGNVFIKNLDK+I
Sbjct: 53 GYAYVNFQQP--ADAERALDTMNFDMIKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKNI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKAMYDTFSAFG+ILSCKVAQDE G SKGYGFVHFETEEAANKSI++VNGMLLN K
Sbjct: 111 DNKAMYDTFSAFGNILSCKVAQDESGVSKGYGFVHFETEEAANKSIDRVNGMLLNGK--- 167
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGK 241
KNFGED D+KLK+MFE YGTITS++VM +DGK
Sbjct: 168 --------------------------KNFGEDMTDDKLKDMFEKYGTITSHKVMIKDDGK 201
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEV-DGKILYVGRAQKKAERTQELKRRFEMLKIERL 300
SRGFGFVA+E P+ AE+AV NGKEV +GK +YVGRAQKKAER QELKR+FE LK+ERL
Sbjct: 202 SRGFGFVAFEDPDAAEQAVLELNGKEVAEGKCMYVGRAQKKAERQQELKRKFEQLKLERL 261
Query: 301 NRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
NRYQGVNLYVKNLDDSIDDERLRKEF PFGTITSAK
Sbjct: 262 NRYQGVNLYVKNLDDSIDDERLRKEFAPFGTITSAK 297
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 69/188 (36%), Positives = 112/188 (59%), Gaps = 11/188 (5%)
Query: 116 KNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGM- 174
KN + + + + D F +G+I S KV + G S+G+GFV FE +AA +++ ++NG
Sbjct: 168 KNFGEDMTDDKLKDMFEKYGTITSHKVMIKDDGKSRGFGFVAFEDPDAAEQAVLELNGKE 227
Query: 175 LLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKLKEMF 224
+ K ++VG+ + ER++EL K + N+Y+KN + +DE+L++ F
Sbjct: 228 VAEGKCMYVGRAQKKAERQQELKRKFEQLKLERLNRYQGVNLYVKNLDDSIDDERLRKEF 287
Query: 225 EPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAER 284
P+GTITS +VM +G+S+GFGFV + +PE A KAV NG+ + K LYV AQ+K +R
Sbjct: 288 APFGTITSAKVMMEEGRSKGFGFVCFSAPEEATKAVTEMNGRIIVTKPLYVALAQRKEDR 347
Query: 285 TQELKRRF 292
L ++
Sbjct: 348 KAHLASQY 355
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 110/237 (46%), Gaps = 47/237 (19%)
Query: 102 DPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFET 160
+P + ++++ +L I +++ FS+ G +LS +V +D S GY +V+F+
Sbjct: 2 NPGAPNYPMASLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 161 EEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKL 220
A ++++ +N ++ + + I +R+ L + NV+IKN ++ +++ +
Sbjct: 62 PADAERALDTMNFDMIKGRPI----RIMWSQRDPSLRKSG--VGNVFIKNLDKNIDNKAM 115
Query: 221 KEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQ 279
+ F +G I S +V ++ G S+G+GFV +E+ E A K++ NG ++GK
Sbjct: 116 YDTFSAFGNILSCKVAQDESGVSKGYGFVHFETEEAANKSIDRVNGMLLNGK-------- 167
Query: 280 KKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
KN + + D++L+ F +GTITS K
Sbjct: 168 -------------------------------KNFGEDMTDDKLKDMFEKYGTITSHK 193
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 70/122 (57%), Gaps = 3/122 (2%)
Query: 106 RKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAAN 165
R GV N+++KNLD SID++ + F+ FG+I S KV +E G SKG+GFV F E A
Sbjct: 263 RYQGV-NLYVKNLDDSIDDERLRKEFAPFGTITSAKVMMEE-GRSKGFGFVCFSAPEEAT 320
Query: 166 KSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEK-AKLFTNVYIKNFGEDFNDEKLKEMF 224
K++ ++NG ++ +K ++V +++R+ L + + N+ ++ G+ F F
Sbjct: 321 KAVTEMNGRIIVTKPLYVALAQRKEDRKAHLASQYMQRLANMRMQQMGQIFQPGGAGNYF 380
Query: 225 EP 226
P
Sbjct: 381 VP 382
>gi|383417509|gb|AFH31968.1| polyadenylate-binding protein 1 [Macaca mulatta]
Length = 456
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 196/275 (71%), Positives = 228/275 (82%), Gaps = 7/275 (2%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD +KG+P+RIMWSQRDPSLRKSGVGN+FIKNLDKSI
Sbjct: 53 GYAYVNFQQP--ADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFSAFG+ILSCKV DE G SKGYGFVHFET+EAA ++IEK+NGMLLN + VF
Sbjct: 111 DNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVF 169
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GK 241
VG+F RKERE ELG +AK FTNVYIKNFGED +DE+LK++F G S +VM ++ GK
Sbjct: 170 VGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLF---GPALSVKVMTDESGK 226
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
S+GFGFV++E E A+KAV NGKE++GK +YVGRAQKK ER ELKR+FE +K +R+
Sbjct: 227 SKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRIT 286
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLYVKNLDD IDDERLRKEF+PFGTITSAK
Sbjct: 287 RYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAK 321
Score = 151 bits (382), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 92/232 (39%), Positives = 132/232 (56%), Gaps = 19/232 (8%)
Query: 77 TERALDTMNFDALKGRPIRI----MWSQRDPSL--RKSGVGNVFIKNLDKSIDNKAMYDT 130
ERA++ MN L R + + +R+ L R NV+IKN + +D++ + D
Sbjct: 151 AERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDL 210
Query: 131 FSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRK 190
F G LS KV DE G SKG+GFV FE E A K+++++NG LN K ++VG+ +
Sbjct: 211 F---GPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKV 267
Query: 191 EREKELGEKAKLF----------TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDG 240
ER+ EL K + N+Y+KN + +DE+L++ F P+GTITS +VM G
Sbjct: 268 ERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGG 327
Query: 241 KSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRF 292
+S+GFGFV + SPE A KAV NG+ V K LYV AQ+K ER L ++
Sbjct: 328 RSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAHLTNQY 379
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 122/228 (53%), Gaps = 17/228 (7%)
Query: 102 DPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFET 160
+PS + ++++ +L + +Y+ FS G ILS +V +D S GY +V+F+
Sbjct: 2 NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 161 EEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKL 220
A ++++ +N ++ K V I +R+ L + N++IKN + +++ L
Sbjct: 62 PADAERALDTMNFDVIKGKPV----RIMWSQRDPSLRKSG--VGNIFIKNLDKSIDNKAL 115
Query: 221 KEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
+ F +G I S +V+ ++ S+G+GFV +E+ E AE+A++ NG ++ + ++VGR +
Sbjct: 116 YDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKS 175
Query: 281 KAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTP 328
+ ER EL R + N+Y+KN + +DDERL+ F P
Sbjct: 176 RKEREAELGARAKEF----------TNVYIKNFGEDMDDERLKDLFGP 213
>gi|2665654|gb|AAB88449.1| polyadenylate binding protein [Petromyzon marinus]
Length = 630
Score = 393 bits (1010), Expect = e-107, Method: Compositional matrix adjust.
Identities = 196/276 (71%), Positives = 231/276 (83%), Gaps = 5/276 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD +KG+PIRIMWSQRDPSLR+SGVGN+FIKNLDKSI
Sbjct: 53 GYAYVNFQQP--ADAERALDTMNFDVVKGKPIRIMWSQRDPSLRRSGVGNIFIKNLDKSI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFSAFG+ILSCKV DE G SKGYGFVHFET+EAA+K+IEK+NGMLLN + VF
Sbjct: 111 DNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAADKAIEKMNGMLLNDRKVF 169
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPY-GTITSYRVMNNDG- 240
VG+F RKERE E G KA+ FTNVYIKNFG+D +DE+L+E FE Y G S +VM ++G
Sbjct: 170 VGRFKSRKEREAEFGAKAREFTNVYIKNFGDDMDDERLREYFEQYVGKTLSVKVMMDEGG 229
Query: 241 KSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERL 300
KS+GFGFV++E E A+KAV N KE++G+ +YVGRAQKKAER ELKR+FEMLK ER+
Sbjct: 230 KSKGFGFVSFERHEDAQKAVDEMNTKELNGRAIYVGRAQKKAERQTELKRKFEMLKQERM 289
Query: 301 NRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
++YQGVNLYVKNLDD+I+DERL KEF+PFGTITSAK
Sbjct: 290 SKYQGVNLYVKNLDDNINDERLWKEFSPFGTITSAK 325
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 81/192 (42%), Positives = 117/192 (60%), Gaps = 11/192 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAF-GSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEK 170
NV+IKN +D++ + + F + G LS KV DE G SKG+GFV FE E A K++++
Sbjct: 192 NVYIKNFGDDMDDERLREYFEQYVGKTLSVKVMMDEGGKSKGFGFVSFERHEDAQKAVDE 251
Query: 171 VNGMLLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKL 220
+N LN + ++VG+ + ER+ EL K ++ N+Y+KN ++ NDE+L
Sbjct: 252 MNTKELNGRAIYVGRAQKKAERQTELKRKFEMLKQERMSKYQGVNLYVKNLDDNINDERL 311
Query: 221 KEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
+ F P+GTITS +VM +G+SRGFGFV + SPE A KAV NG+ + K LYV AQ+
Sbjct: 312 WKEFSPFGTITSAKVMMEEGRSRGFGFVCFSSPEEATKAVTEMNGRIIGSKPLYVALAQR 371
Query: 281 KAERTQELKRRF 292
K ER L +F
Sbjct: 372 KEERKMHLTSQF 383
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 120/229 (52%), Gaps = 23/229 (10%)
Query: 102 DPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFET 160
+P+ + +++I +L + +Y+ FS G ILS +V +D S GY +V+F+
Sbjct: 2 NPAGPSYPMASLYIGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 161 EEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKL 220
A ++++ +N ++ K + I +R+ L N++IKN + +++ L
Sbjct: 62 PADAERALDTMNFDVVKGKPI----RIMWSQRDPSLRRSG--VGNIFIKNLDKSIDNKAL 115
Query: 221 KEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
+ F +G I S +V+ ++ S+G+GFV +E+ E A+KA++ NG ++ + ++VGR +
Sbjct: 116 YDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKS 175
Query: 281 KAERTQEL---KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEF 326
+ ER E R F N+Y+KN D +DDERLR+ F
Sbjct: 176 RKEREAEFGAKAREF-------------TNVYIKNFGDDMDDERLREYF 211
>gi|281350417|gb|EFB26001.1| hypothetical protein PANDA_001865 [Ailuropoda melanoleuca]
Length = 640
Score = 393 bits (1009), Expect = e-107, Method: Compositional matrix adjust.
Identities = 194/279 (69%), Positives = 230/279 (82%), Gaps = 8/279 (2%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVG----NVFIKNL 118
G V QP +D +RAL+T+NFD +KGRP+RIMWSQRDPSLRKSGVG N+FIKNL
Sbjct: 53 GYAYVNYQQP--VDAKRALETLNFDVIKGRPVRIMWSQRDPSLRKSGVGGGVGNIFIKNL 110
Query: 119 DKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNS 178
DKSIDNKA+YDTFSAFG+ILSCKV DE G SKGYGFVHFET+EAA ++IEK+NGMLLN
Sbjct: 111 DKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLND 169
Query: 179 KIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN 238
+ VFVG+F RKERE ELG +AK FTNVYIKNFGED +DE+LK++F +G S +VM +
Sbjct: 170 RKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTD 229
Query: 239 D-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKI 297
+ GKS+GFGFV++E E A+KAV NGKE++GK +YVGRAQKK ER ELKR+FE +K
Sbjct: 230 ESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQ 289
Query: 298 ERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+R+ RYQGVNLYVKNLDD IDDERLRKEF+PFGTITSAK
Sbjct: 290 DRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAK 328
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 93/232 (40%), Positives = 133/232 (57%), Gaps = 16/232 (6%)
Query: 77 TERALDTMNFDALKGRPIRI----MWSQRDPSL--RKSGVGNVFIKNLDKSIDNKAMYDT 130
ERA++ MN L R + + +R+ L R NV+IKN + +D++ + D
Sbjct: 155 AERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDL 214
Query: 131 FSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRK 190
F FG LS KV DE G SKG+GFV FE E A K+++++NG LN K ++VG+ +
Sbjct: 215 FGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKV 274
Query: 191 EREKELGEKAKLF----------TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDG 240
ER+ EL K + N+Y+KN + +DE+L++ F P+GTITS +VM G
Sbjct: 275 ERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGG 334
Query: 241 KSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRF 292
+S+GFGFV + SPE A KAV NG+ V K LYV AQ+K ER L ++
Sbjct: 335 RSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAHLTNQY 386
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 127/236 (53%), Gaps = 13/236 (5%)
Query: 102 DPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFET 160
+PS + ++++ +L + +Y+ FS G ILS ++ +D+ S GY +V+++
Sbjct: 2 NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQ 61
Query: 161 EEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKL 220
A +++E +N ++ + V + + R ++ G + N++IKN + +++ L
Sbjct: 62 PVDAKRALETLNFDVIKGRPVRI-MWSQRDPSLRKSGVGGGV-GNIFIKNLDKSIDNKAL 119
Query: 221 KEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
+ F +G I S +V+ ++ S+G+GFV +E+ E AE+A++ NG ++ + ++VGR +
Sbjct: 120 YDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKS 179
Query: 281 KAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ ER EL R + N+Y+KN + +DDERL+ F FG S K
Sbjct: 180 RKEREAELGARAKEF----------TNVYIKNFGEDMDDERLKDLFGKFGPALSVK 225
>gi|148539604|ref|NP_001091917.1| polyA-binding protein [Strongylocentrotus purpuratus]
gi|126722149|emb|CAM57104.1| polyA-binding protein [Strongylocentrotus purpuratus]
Length = 640
Score = 393 bits (1009), Expect = e-107, Method: Compositional matrix adjust.
Identities = 194/274 (70%), Positives = 217/274 (79%), Gaps = 2/274 (0%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD LKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI
Sbjct: 53 GYAYVNFQQP--ADAERALDTMNFDTLKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKAMYDTFSAFG ILSCKV DE G +KGYGFVHFET+EAANK+IEKVNGMLLN K V+
Sbjct: 111 DNKAMYDTFSAFGHILSCKVVTDENGVNKGYGFVHFETQEAANKAIEKVNGMLLNGKKVY 170
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDGKS 242
VG FIPRKER ++G+ K FTNV+IKN ED +D KL E YG+I S ++M +D KS
Sbjct: 171 VGYFIPRKERLMQMGDHQKQFTNVFIKNLAEDVDDGKLAEFGGQYGSILSAKIMFDDSKS 230
Query: 243 RGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNR 302
+GFGF+++E E A V+ NG EV+G+ LY GRAQKKAER ELK RFE LK ER R
Sbjct: 231 KGFGFISFEDHEAANDFVKTINGSEVNGRTLYAGRAQKKAERAAELKARFEALKQERSTR 290
Query: 303 YQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
YQGVNLY+KNLDD IDDERLRKEF+ +GTITSAK
Sbjct: 291 YQGVNLYIKNLDDEIDDERLRKEFSRYGTITSAK 324
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 77/192 (40%), Positives = 116/192 (60%), Gaps = 12/192 (6%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NVFIKNL + +D+ + + +GSILS K+ D+ SKG+GF+ FE EAAN ++ +
Sbjct: 193 NVFIKNLAEDVDDGKLAEFGGQYGSILSAKIMFDD-SKSKGFGFISFEDHEAANDFVKTI 251
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKLK 221
NG +N + ++ G+ + ER EL + + N+YIKN ++ +DE+L+
Sbjct: 252 NGSEVNGRTLYAGRAQKKAERAAELKARFEALKQERSTRYQGVNLYIKNLDDEIDDERLR 311
Query: 222 EMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
+ F YGTITS +VM++D S+GFGFV + SPE A KAV NG+ + K LYV AQ+
Sbjct: 312 KEFSRYGTITSAKVMSDDKANSKGFGFVCFSSPEEATKAVTEMNGRILVAKPLYVALAQR 371
Query: 281 KAERTQELKRRF 292
K ER +L ++
Sbjct: 372 KDERRAQLASQY 383
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 123/229 (53%), Gaps = 18/229 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + +++ FS G ILS +V +D S GY +V+F+ A +++
Sbjct: 10 MNSLYVGDLHADVTEALLFEKFSTAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERAL 69
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N L + + I +R+ L + NV+IKN + +++ + + F +G
Sbjct: 70 DTMNFDTLKGRPI----RIMWSQRDPSLRKSG--VGNVFIKNLDKSIDNKAMYDTFSAFG 123
Query: 229 TITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQE 287
I S +V+ ++ G ++G+GFV +E+ E A KA++ NG ++GK +YVG + ER +
Sbjct: 124 HILSCKVVTDENGVNKGYGFVHFETQEAANKAIEKVNGMLLNGKKVYVGYFIPRKERLMQ 183
Query: 288 LKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ ++ Q N+++KNL + +DD +L + +G+I SAK
Sbjct: 184 MGD----------HQKQFTNVFIKNLAEDVDDGKLAEFGGQYGSILSAK 222
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 61/96 (63%), Gaps = 1/96 (1%)
Query: 104 SLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEA 163
S R GV N++IKNLD ID++ + FS +G+I S KV D++ NSKG+GFV F + E
Sbjct: 288 STRYQGV-NLYIKNLDDEIDDERLRKEFSRYGTITSAKVMSDDKANSKGFGFVCFSSPEE 346
Query: 164 ANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEK 199
A K++ ++NG +L +K ++V + ER +L +
Sbjct: 347 ATKAVTEMNGRILVAKPLYVALAQRKDERRAQLASQ 382
>gi|91094515|ref|XP_971941.1| PREDICTED: similar to poly A binding protein [Tribolium castaneum]
gi|270000753|gb|EEZ97200.1| hypothetical protein TcasGA2_TC004389 [Tribolium castaneum]
Length = 565
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 188/263 (71%), Positives = 223/263 (84%), Gaps = 1/263 (0%)
Query: 75 LDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAF 134
++ ER LDTMNFD LKG+PIRIMWSQRDPSLRKSG+GNVFIKNLDKSIDNKAMYDTFSAF
Sbjct: 64 IEAERVLDTMNFDLLKGKPIRIMWSQRDPSLRKSGIGNVFIKNLDKSIDNKAMYDTFSAF 123
Query: 135 GSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREK 194
G+ILSCKVA D+ G SKGYGFVHFE+ EAANK+IEKVNGMLLN K V+VGKFIPR EREK
Sbjct: 124 GNILSCKVAIDDDGVSKGYGFVHFESIEAANKAIEKVNGMLLNGKKVYVGKFIPRAEREK 183
Query: 195 ELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESP 253
E+GEK+K +TNVY+KNFG + E+L ++F+ YGTITS VM N DG S+GFGF+A+E P
Sbjct: 184 EIGEKSKKYTNVYVKNFGRNLTQEQLYDLFKNYGTITSCVVMANPDGTSKGFGFIAFEEP 243
Query: 254 EFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNL 313
E AEKAV N E++G LYVGRAQKK+ER +ELK+ +E +K+ER NR QG N+Y+KNL
Sbjct: 244 ESAEKAVTEMNNYELNGTNLYVGRAQKKSERIKELKKCYEQMKLERYNRIQGANVYIKNL 303
Query: 314 DDSIDDERLRKEFTPFGTITSAK 336
DD+ D++RLRKEF+ FG ITSAK
Sbjct: 304 DDTFDNDRLRKEFSQFGAITSAK 326
Score = 137 bits (344), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 70/183 (38%), Positives = 112/183 (61%), Gaps = 10/183 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV++KN +++ + +YD F +G+I SC V + G SKG+GF+ FE E+A K++ ++
Sbjct: 194 NVYVKNFGRNLTQEQLYDLFKNYGTITSCVVMANPDGTSKGFGFIAFEEPESAEKAVTEM 253
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELG---EKAKL-------FTNVYIKNFGEDFNDEKLK 221
N LN ++VG+ + ER KEL E+ KL NVYIKN + F++++L+
Sbjct: 254 NNYELNGTNLYVGRAQKKSERIKELKKCYEQMKLERYNRIQGANVYIKNLDDTFDNDRLR 313
Query: 222 EMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKK 281
+ F +G ITS +VM G+S+GFGFV + +PE A KA+ +G+ + K +YV AQ+
Sbjct: 314 KEFSQFGAITSAKVMTEGGRSKGFGFVCFSTPEEASKAITEMDGRMIGSKPIYVALAQRY 373
Query: 282 AER 284
+R
Sbjct: 374 EDR 376
Score = 107 bits (267), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 124/226 (54%), Gaps = 18/226 (7%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQG-NSKGYGFVHFETEEAANKSIEK 170
++++ +L + +Y+ FS G ILS +V +D + S GY +V+F A + ++
Sbjct: 13 SLYVGDLHPDVTEALLYEKFSPAGQILSLRVCRDSRTKQSLGYAYVNFSQTIEAERVLDT 72
Query: 171 VNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTI 230
+N LL K + I +R+ L + NV+IKN + +++ + + F +G I
Sbjct: 73 MNFDLLKGKPI----RIMWSQRDPSLRKSG--IGNVFIKNLDKSIDNKAMYDTFSAFGNI 126
Query: 231 TSYRV-MNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELK 289
S +V +++DG S+G+GFV +ES E A KA++ NG ++GK +YVG+ +AER +E+
Sbjct: 127 LSCKVAIDDDGVSKGYGFVHFESIEAANKAIEKVNGMLLNGKKVYVGKFIPRAEREKEIG 186
Query: 290 RRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSA 335
E+ +Y N+YVKN ++ E+L F +GTITS
Sbjct: 187 --------EKSKKY--TNVYVKNFGRNLTQEQLYDLFKNYGTITSC 222
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 62/137 (45%), Gaps = 20/137 (14%)
Query: 203 FTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND--GKSRGFGFVAYESPEFAEKAV 260
T++Y+ + D + L E F P G I S RV + +S G+ +V + AE+ +
Sbjct: 11 LTSLYVGDLHPDVTEALLYEKFSPAGQILSLRVCRDSRTKQSLGYAYVNFSQTIEAERVL 70
Query: 261 QAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGV-NLYVKNLDDSIDD 319
N + GK + + +Q+ R G+ N+++KNLD SID+
Sbjct: 71 DTMNFDLLKGKPIRIMWSQRDPSL-----------------RKSGIGNVFIKNLDKSIDN 113
Query: 320 ERLRKEFTPFGTITSAK 336
+ + F+ FG I S K
Sbjct: 114 KAMYDTFSAFGNILSCK 130
>gi|383862671|ref|XP_003706807.1| PREDICTED: polyadenylate-binding protein 1-like isoform 3
[Megachile rotundata]
Length = 601
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 200/276 (72%), Positives = 218/276 (78%), Gaps = 33/276 (11%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD +KGRPIRIMWSQRDPSLRKSGVGNVFIKNLDK+I
Sbjct: 53 GYAYVNFQQP--ADAERALDTMNFDMIKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKNI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKAMYDTFSAFG+ILSCKVAQDE G SKGYGFVHFETEEAANKSI+KVNGMLLN K
Sbjct: 111 DNKAMYDTFSAFGNILSCKVAQDESGVSKGYGFVHFETEEAANKSIDKVNGMLLNGK--- 167
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGK 241
KNFGED D+KLKEMFE YGTITS++VM +DGK
Sbjct: 168 --------------------------KNFGEDMTDDKLKEMFEKYGTITSHKVMIKDDGK 201
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEV-DGKILYVGRAQKKAERTQELKRRFEMLKIERL 300
SRGFGFVA+E P+ AE+AV NGKEV +GK +YVGRAQKKAER QELKR+FE LK+ERL
Sbjct: 202 SRGFGFVAFEDPDAAEQAVLELNGKEVAEGKCMYVGRAQKKAERQQELKRKFEQLKLERL 261
Query: 301 NRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+RYQGVNLYVKNLDDSI+DERLR+EF PFGTITSAK
Sbjct: 262 SRYQGVNLYVKNLDDSINDERLRREFAPFGTITSAK 297
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 70/188 (37%), Positives = 111/188 (59%), Gaps = 11/188 (5%)
Query: 116 KNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGM- 174
KN + + + + + F +G+I S KV + G S+G+GFV FE +AA +++ ++NG
Sbjct: 168 KNFGEDMTDDKLKEMFEKYGTITSHKVMIKDDGKSRGFGFVAFEDPDAAEQAVLELNGKE 227
Query: 175 LLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKLKEMF 224
+ K ++VG+ + ER++EL K + N+Y+KN + NDE+L+ F
Sbjct: 228 VAEGKCMYVGRAQKKAERQQELKRKFEQLKLERLSRYQGVNLYVKNLDDSINDERLRREF 287
Query: 225 EPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAER 284
P+GTITS +VM DG+S+GFGFV + +PE A KAV NG+ + K LYV AQ+K +R
Sbjct: 288 APFGTITSAKVMMEDGRSKGFGFVCFSAPEEATKAVTEMNGRIIVTKPLYVALAQRKEDR 347
Query: 285 TQELKRRF 292
L ++
Sbjct: 348 KAHLASQY 355
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 111/237 (46%), Gaps = 47/237 (19%)
Query: 102 DPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFET 160
+P + ++++ +L I +++ FS+ G +LS +V +D S GY +V+F+
Sbjct: 2 NPGAPNYPMASLYVGDLHADITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 161 EEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKL 220
A ++++ +N ++ + + I +R+ L + NV+IKN ++ +++ +
Sbjct: 62 PADAERALDTMNFDMIKGRPI----RIMWSQRDPSLRKSG--VGNVFIKNLDKNIDNKAM 115
Query: 221 KEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQ 279
+ F +G I S +V ++ G S+G+GFV +E+ E A K++ NG ++GK
Sbjct: 116 YDTFSAFGNILSCKVAQDESGVSKGYGFVHFETEEAANKSIDKVNGMLLNGK-------- 167
Query: 280 KKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
KN + + D++L++ F +GTITS K
Sbjct: 168 -------------------------------KNFGEDMTDDKLKEMFEKYGTITSHK 193
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 71/124 (57%), Gaps = 10/124 (8%)
Query: 106 RKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAAN 165
R GV N+++KNLD SI+++ + F+ FG+I S KV E G SKG+GFV F E A
Sbjct: 263 RYQGV-NLYVKNLDDSINDERLRREFAPFGTITSAKVMM-EDGRSKGFGFVCFSAPEEAT 320
Query: 166 KSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFE 225
K++ ++NG ++ +K ++V +++R+ L + Y++ + +++ +MF
Sbjct: 321 KAVTEMNGRIIVTKPLYVALAQRKEDRKAHLASQ-------YMQRLA-NMRMQQMGQMFP 372
Query: 226 PYGT 229
P G
Sbjct: 373 PGGA 376
>gi|52346030|ref|NP_001005062.1| embryonic polyadenylate-binding protein [Xenopus (Silurana)
tropicalis]
gi|82235830|sp|Q6DEY7.1|EPAB_XENTR RecName: Full=Embryonic polyadenylate-binding protein;
Short=Embryonic poly(A)-binding protein; Short=ePABP
gi|49899948|gb|AAH76956.1| MGC89376 protein [Xenopus (Silurana) tropicalis]
Length = 629
Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust.
Identities = 189/275 (68%), Positives = 225/275 (81%), Gaps = 4/275 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G + QP D ERALDTMNF+ +KGRPIRIMWSQRDP LRKSGVGNVFIKNLD+SI
Sbjct: 53 GYAYINFQQP--ADAERALDTMNFEVIKGRPIRIMWSQRDPGLRKSGVGNVFIKNLDESI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFSAFG+ILSCKV DE G S+GYGFVHFET+EAAN++I+ +NGMLLN + VF
Sbjct: 111 DNKALYDTFSAFGNILSCKVVCDEHG-SRGYGFVHFETQEAANRAIQTMNGMLLNDRKVF 169
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GK 241
VG F R+ERE E G K FTNVYIKNFGED +D++L+E+F +G S +VM +D G+
Sbjct: 170 VGHFKSRRERELEYGAKVMEFTNVYIKNFGEDMDDKRLREIFSAFGNTLSVKVMMDDTGR 229
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
SRGFGFV Y + E A+KAV NGKEV+G+++YVGRAQK+ ER ELKR+FE +K ER+N
Sbjct: 230 SRGFGFVNYGNHEEAQKAVSEMNGKEVNGRMIYVGRAQKRIERQGELKRKFEQIKQERIN 289
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLYVKNLDD IDD+RLRKEF+P+GTITSAK
Sbjct: 290 RYQGVNLYVKNLDDGIDDDRLRKEFSPYGTITSAK 324
Score = 157 bits (398), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 90/230 (39%), Positives = 134/230 (58%), Gaps = 16/230 (6%)
Query: 79 RALDTMNFDALKGRPIRI--MWSQRDPSLRKSG----VGNVFIKNLDKSIDNKAMYDTFS 132
RA+ TMN L R + + S+R+ L NV+IKN + +D+K + + FS
Sbjct: 153 RAIQTMNGMLLNDRKVFVGHFKSRRERELEYGAKVMEFTNVYIKNFGEDMDDKRLREIFS 212
Query: 133 AFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKER 192
AFG+ LS KV D+ G S+G+GFV++ E A K++ ++NG +N ++++VG+ R ER
Sbjct: 213 AFGNTLSVKVMMDDTGRSRGFGFVNYGNHEEAQKAVSEMNGKEVNGRMIYVGRAQKRIER 272
Query: 193 EKELGEKAKLF----------TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDGKS 242
+ EL K + N+Y+KN + +D++L++ F PYGTITS +VM G S
Sbjct: 273 QGELKRKFEQIKQERINRYQGVNLYVKNLDDGIDDDRLRKEFSPYGTITSAKVMTEGGHS 332
Query: 243 RGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRF 292
+GFGFV + SPE A KAV NG+ V K LYV AQ+K ER L ++
Sbjct: 333 KGFGFVCFSSPEEATKAVTEMNGRIVSTKPLYVALAQRKEERKAILTNQY 382
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 66/137 (48%), Gaps = 20/137 (14%)
Query: 203 FTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDG--KSRGFGFVAYESPEFAEKAV 260
++Y+ + D + L E F P G I S RV + +S G+ ++ ++ P AE+A+
Sbjct: 10 LASLYVGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDIATRRSLGYAYINFQQPADAERAL 69
Query: 261 QAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGV-NLYVKNLDDSIDD 319
N + + G+ + + +Q+ R GV N+++KNLD+SID+
Sbjct: 70 DTMNFEVIKGRPIRIMWSQRDPGL-----------------RKSGVGNVFIKNLDESIDN 112
Query: 320 ERLRKEFTPFGTITSAK 336
+ L F+ FG I S K
Sbjct: 113 KALYDTFSAFGNILSCK 129
>gi|224078006|ref|XP_002190593.1| PREDICTED: embryonic polyadenylate-binding protein-like
[Taeniopygia guttata]
Length = 629
Score = 390 bits (1001), Expect = e-106, Method: Compositional matrix adjust.
Identities = 189/275 (68%), Positives = 225/275 (81%), Gaps = 4/275 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G + QP D ERALDTMNF+ +KGRPIRIMWSQRDP LRKSGVGNVFIKNLD SI
Sbjct: 53 GYAYINFQQP--ADAERALDTMNFEVIKGRPIRIMWSQRDPGLRKSGVGNVFIKNLDDSI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFSAFG+ILSCKV DE G S+GYGFVHFET EAA ++IE +NGMLLN + VF
Sbjct: 111 DNKALYDTFSAFGNILSCKVVCDENG-SRGYGFVHFETHEAATRAIETMNGMLLNDRKVF 169
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGK 241
VG F RKERE E+G +A FTNVYIKNFG+D +D++L+E+F +G S +VM +N+G+
Sbjct: 170 VGHFKSRKEREAEVGARAIEFTNVYIKNFGDDMDDDRLREIFSRFGKTLSVKVMMDNNGR 229
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
S+GFGFV +E E A+KAV NGKE++G++LYVGRAQK+ ER ELKR+FE +K ER+N
Sbjct: 230 SKGFGFVNFEKHEEAQKAVADMNGKEINGRLLYVGRAQKRLERQSELKRKFEQMKQERVN 289
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLYVKNLDD IDDERLRKEF+P+GTITSAK
Sbjct: 290 RYQGVNLYVKNLDDGIDDERLRKEFSPYGTITSAK 324
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 93/233 (39%), Positives = 135/233 (57%), Gaps = 22/233 (9%)
Query: 79 RALDTMNFDALKGRPIRI--MWSQRDPSLRKSGVG-------NVFIKNLDKSIDNKAMYD 129
RA++TMN L R + + S+++ R++ VG NV+IKN +D+ + +
Sbjct: 153 RAIETMNGMLLNDRKVFVGHFKSRKE---REAEVGARAIEFTNVYIKNFGDDMDDDRLRE 209
Query: 130 TFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPR 189
FS FG LS KV D G SKG+GFV+FE E A K++ +NG +N ++++VG+ R
Sbjct: 210 IFSRFGKTLSVKVMMDNNGRSKGFGFVNFEKHEEAQKAVADMNGKEINGRLLYVGRAQKR 269
Query: 190 KEREKELGEKAKLF----------TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND 239
ER+ EL K + N+Y+KN + +DE+L++ F PYGTITS +VM
Sbjct: 270 LERQSELKRKFEQMKQERVNRYQGVNLYVKNLDDGIDDERLRKEFSPYGTITSAKVMTEG 329
Query: 240 GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRF 292
G+S+GFGFV + SPE A KAV NG+ V K LYV AQ+K ER L ++
Sbjct: 330 GRSKGFGFVCFSSPEEATKAVTEMNGRIVSTKPLYVALAQRKEERKAILTNQY 382
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 66/137 (48%), Gaps = 20/137 (14%)
Query: 203 FTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDG--KSRGFGFVAYESPEFAEKAV 260
++Y+ + D + L E F P G I S RV + +S G+ ++ ++ P AE+A+
Sbjct: 10 LASLYVGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDVATRRSLGYAYINFQQPADAERAL 69
Query: 261 QAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGV-NLYVKNLDDSIDD 319
N + + G+ + + +Q+ R GV N+++KNLDDSID+
Sbjct: 70 DTMNFEVIKGRPIRIMWSQRDPGL-----------------RKSGVGNVFIKNLDDSIDN 112
Query: 320 ERLRKEFTPFGTITSAK 336
+ L F+ FG I S K
Sbjct: 113 KALYDTFSAFGNILSCK 129
>gi|334349575|ref|XP_003342221.1| PREDICTED: polyadenylate-binding protein 1-like [Monodelphis
domestica]
Length = 707
Score = 389 bits (1000), Expect = e-106, Method: Compositional matrix adjust.
Identities = 187/262 (71%), Positives = 221/262 (84%), Gaps = 2/262 (0%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D ERAL+TMNFD +KG+P+RIMWSQRDPSLRKSGVGN+FIKNLDKSIDNKA++DTFSAFG
Sbjct: 133 DAERALETMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALFDTFSAFG 192
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCKV DE G SKGYGFVHFET +AA ++I+K+NGMLLN + VFVG+F RKERE E
Sbjct: 193 NILSCKVVCDEHG-SKGYGFVHFETRDAAERAIDKMNGMLLNDRKVFVGRFKSRKEREAE 251
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPE 254
LG +AK FTNVYIKNFGED +D +LK +F +G S +VM ++ G S+GFGFV +E E
Sbjct: 252 LGARAKEFTNVYIKNFGEDMDDLRLKRLFGKFGPALSVKVMTDESGTSKGFGFVNFERHE 311
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A+KAV+ NGKE++GK +YVGRAQKK ER ELKR+FE LK +R+ RYQGVNLYVKNLD
Sbjct: 312 DAQKAVEEMNGKELNGKKIYVGRAQKKGERQTELKRKFEQLKQDRITRYQGVNLYVKNLD 371
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
D IDDERLRKEF+PFGTITSAK
Sbjct: 372 DGIDDERLRKEFSPFGTITSAK 393
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 99/256 (38%), Positives = 140/256 (54%), Gaps = 23/256 (8%)
Query: 77 TERALDTMNFDALKGRPIRI----MWSQRDPSL--RKSGVGNVFIKNLDKSIDNKAMYDT 130
ERA+D MN L R + + +R+ L R NV+IKN + +D+ +
Sbjct: 220 AERAIDKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDLRLKRL 279
Query: 131 FSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRK 190
F FG LS KV DE G SKG+GFV+FE E A K++E++NG LN K ++VG+ +
Sbjct: 280 FGKFGPALSVKVMTDESGTSKGFGFVNFERHEDAQKAVEEMNGKELNGKKIYVGRAQKKG 339
Query: 191 EREKELGEKAKLF----------TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDG 240
ER+ EL K + N+Y+KN + +DE+L++ F P+GTITS +VM G
Sbjct: 340 ERQTELKRKFEQLKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGG 399
Query: 241 KSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRF--EMLKIE 298
+S+GFGFV + SPE A KAV NG+ V K LY+ AQ+K ER L ++ M +
Sbjct: 400 RSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYIALAQRKEERQAHLTNQYMQRMASVR 459
Query: 299 R-----LNRYQGVNLY 309
LN YQ + Y
Sbjct: 460 AVPNPVLNPYQPPSGY 475
>gi|405977322|gb|EKC41780.1| Polyadenylate-binding protein 4 [Crassostrea gigas]
Length = 646
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 197/276 (71%), Positives = 226/276 (81%), Gaps = 5/276 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD +KGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI
Sbjct: 58 GYAYVNFQQP--ADAERALDTMNFDTIKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 115
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFSAFG+ILSCK+ DE G S+GYGFVHFETEEAA +IEKVNGMLLN K VF
Sbjct: 116 DNKALYDTFSAFGNILSCKIVCDEHG-SRGYGFVHFETEEAARIAIEKVNGMLLNGKKVF 174
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDGKS 242
VG+F+ R+ER + LG+K + F NVY+KNF E+ NDE L++MFEPYG I S +VM +DG
Sbjct: 175 VGRFMSRRERLEVLGDKMRKFNNVYVKNFSEEINDETLRDMFEPYGKIISAKVMTDDGSG 234
Query: 243 RGFGF--VAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERL 300
+G GF V++E PE AEKAV+A NG + GKILYVGRAQKK ER ELK +FE +++ER+
Sbjct: 235 KGKGFGFVSFEDPEAAEKAVEALNGNDNSGKILYVGRAQKKIERQAELKEKFERIRMERI 294
Query: 301 NRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
NRYQGVNLYVKNLDD+IDDERLRKEF FGTITSAK
Sbjct: 295 NRYQGVNLYVKNLDDNIDDERLRKEFAQFGTITSAK 330
Score = 134 bits (336), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 79/205 (38%), Positives = 119/205 (58%), Gaps = 13/205 (6%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGF-VHFETEEAANKSIEK 170
NV++KN + I+++ + D F +G I+S KV D+ V FE EAA K++E
Sbjct: 197 NVYVKNFSEEINDETLRDMFEPYGKIISAKVMTDDGSGKGKGFGFVSFEDPEAAEKAVEA 256
Query: 171 VNGMLLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKL 220
+NG + KI++VG+ + ER+ EL EK + N+Y+KN ++ +DE+L
Sbjct: 257 LNGNDNSGKILYVGRAQKKIERQAELKEKFERIRMERINRYQGVNLYVKNLDDNIDDERL 316
Query: 221 KEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
++ F +GTITS +VM G+S+GFGFV + SPE A KAV NG+ V K LYV AQ+
Sbjct: 317 RKEFAQFGTITSAKVMTEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVVAKPLYVALAQR 376
Query: 281 KAERTQELKRRFEMLKIERLNRYQG 305
K +R L ++ M +I + R QG
Sbjct: 377 KEDRKAHLASQY-MQRITSM-RMQG 399
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 126/236 (53%), Gaps = 17/236 (7%)
Query: 102 DPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFET 160
+P+ + ++++ +L + +++ FS G +LS +V +D S GY +V+F+
Sbjct: 7 NPAGPSYPMASLYVGDLHPDVTEAMLFEKFSTAGPVLSIRVCRDMITRRSLGYAYVNFQQ 66
Query: 161 EEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKL 220
A ++++ +N + + + I +R+ L + NV+IKN + +++ L
Sbjct: 67 PADAERALDTMNFDTIKGRPI----RIMWSQRDPSLRKSG--VGNVFIKNLDKSIDNKAL 120
Query: 221 KEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
+ F +G I S +++ ++ SRG+GFV +E+ E A A++ NG ++GK ++VGR
Sbjct: 121 YDTFSAFGNILSCKIVCDEHGSRGYGFVHFETEEAARIAIEKVNGMLLNGKKVFVGRFMS 180
Query: 281 KAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ ER + L K+ + N N+YVKN + I+DE LR F P+G I SAK
Sbjct: 181 RRERLEVLGD-----KMRKFN-----NVYVKNFSEEINDETLRDMFEPYGKIISAK 226
>gi|148227542|ref|NP_001082094.1| embryonic polyadenylate-binding protein A [Xenopus laevis]
gi|94711253|sp|Q98SP8.2|EPABA_XENLA RecName: Full=Embryonic polyadenylate-binding protein A;
Short=Embryonic poly(A)-binding protein A; Short=ePAB-A;
Short=ePABP-A; AltName: Full=XePABP-A
gi|51258324|gb|AAH80020.1| EPAB protein [Xenopus laevis]
Length = 629
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 186/262 (70%), Positives = 219/262 (83%), Gaps = 2/262 (0%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D ERALDTMNF+ +KGRPIRIMWSQRDP LRKSGVGNVFIKNLD+SIDNKA+YDTFSAFG
Sbjct: 64 DAERALDTMNFEVIKGRPIRIMWSQRDPGLRKSGVGNVFIKNLDESIDNKALYDTFSAFG 123
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCKV DE G S+GYGFVHFET EAAN++I+ +NGMLLN + VFVG F R+ERE E
Sbjct: 124 NILSCKVVCDEHG-SRGYGFVHFETHEAANRAIQTMNGMLLNDRKVFVGHFKSRRERELE 182
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPE 254
G K FTNVYIKNFGED +D++L+E+F +G S +VM +D G+SRGFGFV Y + E
Sbjct: 183 YGAKVMEFTNVYIKNFGEDMDDKRLREIFSAFGNTLSVKVMMDDSGRSRGFGFVNYGNHE 242
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A+KAV NGKEV+G+++YVGRAQK+ ER ELKR+FE +K ER+NRYQGVNLYVKNLD
Sbjct: 243 EAQKAVSEMNGKEVNGRMIYVGRAQKRIERQSELKRKFEQIKQERINRYQGVNLYVKNLD 302
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
D IDD+RLRKEF P+GTITSAK
Sbjct: 303 DGIDDDRLRKEFLPYGTITSAK 324
Score = 157 bits (397), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 90/230 (39%), Positives = 134/230 (58%), Gaps = 16/230 (6%)
Query: 79 RALDTMNFDALKGRPIRI--MWSQRDPSLRKSG----VGNVFIKNLDKSIDNKAMYDTFS 132
RA+ TMN L R + + S+R+ L NV+IKN + +D+K + + FS
Sbjct: 153 RAIQTMNGMLLNDRKVFVGHFKSRRERELEYGAKVMEFTNVYIKNFGEDMDDKRLREIFS 212
Query: 133 AFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKER 192
AFG+ LS KV D+ G S+G+GFV++ E A K++ ++NG +N ++++VG+ R ER
Sbjct: 213 AFGNTLSVKVMMDDSGRSRGFGFVNYGNHEEAQKAVSEMNGKEVNGRMIYVGRAQKRIER 272
Query: 193 EKELGEKAKLF----------TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDGKS 242
+ EL K + N+Y+KN + +D++L++ F PYGTITS +VM G S
Sbjct: 273 QSELKRKFEQIKQERINRYQGVNLYVKNLDDGIDDDRLRKEFLPYGTITSAKVMTEGGHS 332
Query: 243 RGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRF 292
+GFGFV + SPE A KAV NG+ V K LYV AQ+K ER L ++
Sbjct: 333 KGFGFVCFSSPEEATKAVTEMNGRIVSTKPLYVALAQRKEERKAILTNQY 382
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 65/137 (47%), Gaps = 20/137 (14%)
Query: 203 FTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDG--KSRGFGFVAYESPEFAEKAV 260
++YI + D + L E F P G I S RV + +S + ++ ++ P AE+A+
Sbjct: 10 LASLYIGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDIATRRSLSYAYINFQQPADAERAL 69
Query: 261 QAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGV-NLYVKNLDDSIDD 319
N + + G+ + + +Q+ R GV N+++KNLD+SID+
Sbjct: 70 DTMNFEVIKGRPIRIMWSQRDPGL-----------------RKSGVGNVFIKNLDESIDN 112
Query: 320 ERLRKEFTPFGTITSAK 336
+ L F+ FG I S K
Sbjct: 113 KALYDTFSAFGNILSCK 129
>gi|13540314|gb|AAK29408.1|AF338225_1 embryonic poly(A) binding protein [Xenopus laevis]
Length = 629
Score = 389 bits (999), Expect = e-105, Method: Compositional matrix adjust.
Identities = 186/262 (70%), Positives = 219/262 (83%), Gaps = 2/262 (0%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D ERALDTMNF+ +KGRPIRIMWSQRDP LRKSGVGNVFIKNLD+SIDNKA+YDTFSAFG
Sbjct: 64 DAERALDTMNFEVIKGRPIRIMWSQRDPGLRKSGVGNVFIKNLDESIDNKALYDTFSAFG 123
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCKV DE G S+GYGFVHFET EAAN++I+ +NGMLLN + VFVG F R+ERE E
Sbjct: 124 NILSCKVVCDEHG-SRGYGFVHFETHEAANRAIQTMNGMLLNDRKVFVGHFKSRRERELE 182
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPE 254
G K FTNVYIKNFGED +D++L+E+F +G S +VM +D G+SRGFGFV Y + E
Sbjct: 183 YGAKVMEFTNVYIKNFGEDMDDKRLREIFSAFGNTLSVKVMMDDSGRSRGFGFVNYGNHE 242
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A+KAV NGKEV+G+++YVGRAQK+ ER ELKR+FE +K ER+NRYQGVNLYVKNLD
Sbjct: 243 EAQKAVSEMNGKEVNGRMIYVGRAQKRIERQSELKRKFEQIKQERINRYQGVNLYVKNLD 302
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
D IDD+RLRKEF P+GTITSAK
Sbjct: 303 DGIDDDRLRKEFLPYGTITSAK 324
Score = 157 bits (397), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 90/230 (39%), Positives = 134/230 (58%), Gaps = 16/230 (6%)
Query: 79 RALDTMNFDALKGRPIRI--MWSQRDPSLRKSG----VGNVFIKNLDKSIDNKAMYDTFS 132
RA+ TMN L R + + S+R+ L NV+IKN + +D+K + + FS
Sbjct: 153 RAIQTMNGMLLNDRKVFVGHFKSRRERELEYGAKVMEFTNVYIKNFGEDMDDKRLREIFS 212
Query: 133 AFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKER 192
AFG+ LS KV D+ G S+G+GFV++ E A K++ ++NG +N ++++VG+ R ER
Sbjct: 213 AFGNTLSVKVMMDDSGRSRGFGFVNYGNHEEAQKAVSEMNGKEVNGRMIYVGRAQKRIER 272
Query: 193 EKELGEKAKLF----------TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDGKS 242
+ EL K + N+Y+KN + +D++L++ F PYGTITS +VM G S
Sbjct: 273 QSELKRKFEQIKQERINRYQGVNLYVKNLDDGIDDDRLRKEFLPYGTITSAKVMTEGGHS 332
Query: 243 RGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRF 292
+GFGFV + SPE A KAV NG+ V K LYV AQ+K ER L ++
Sbjct: 333 KGFGFVCFSSPEEATKAVTEMNGRIVSTKPLYVALAQRKEERKAILTNQY 382
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 65/137 (47%), Gaps = 20/137 (14%)
Query: 203 FTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDG--KSRGFGFVAYESPEFAEKAV 260
++YI + D + L E F P G I S RV + +S + ++ ++ P AE+A+
Sbjct: 10 LASLYIGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDIATRRSLSYAYINFQQPADAERAL 69
Query: 261 QAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGV-NLYVKNLDDSIDD 319
N + + G+ + + +Q+ R GV N+++KNLD+SID+
Sbjct: 70 DTMNFEVIKGRPIRIMWSQRDPGL-----------------RKSGVGNVFIKNLDESIDN 112
Query: 320 ERLRKEFTPFGTITSAK 336
+ L F+ FG I S K
Sbjct: 113 KALYDTFSAFGNILSCK 129
>gi|126342235|ref|XP_001367420.1| PREDICTED: polyadenylate-binding protein 1-like [Monodelphis
domestica]
Length = 635
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 191/275 (69%), Positives = 225/275 (81%), Gaps = 4/275 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERAL+TMNFD +KG+P+RIMWSQRDPSLRKSGVGN+FIKNLDKSI
Sbjct: 53 GYAYVNFQQP--ADAERALETMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA++DTFSAFG+ILSCKV DE G SKGYGFVHFET +AA ++I+K+NGMLLN + VF
Sbjct: 111 DNKALFDTFSAFGNILSCKVVCDEHG-SKGYGFVHFETRDAAERAIDKMNGMLLNDRKVF 169
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GK 241
VG+F RKERE ELG +AK FTNVYIKNFGED +D +LK +F +G S +VM ++ G
Sbjct: 170 VGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDLRLKRLFGKFGPSLSVKVMTDESGT 229
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
S+GFGFV +E E A+KAV+ NGKE++GK +YVGRAQKK ER ELKR+FE LK +R+
Sbjct: 230 SKGFGFVNFERHEDAQKAVEEMNGKELNGKKIYVGRAQKKGERQTELKRKFEQLKQDRIT 289
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLYVKNLDD IDDERLRKEF+PFGTITSAK
Sbjct: 290 RYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAK 324
Score = 157 bits (397), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 99/256 (38%), Positives = 140/256 (54%), Gaps = 23/256 (8%)
Query: 77 TERALDTMNFDALKGRPIRI----MWSQRDPSL--RKSGVGNVFIKNLDKSIDNKAMYDT 130
ERA+D MN L R + + +R+ L R NV+IKN + +D+ +
Sbjct: 151 AERAIDKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDLRLKRL 210
Query: 131 FSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRK 190
F FG LS KV DE G SKG+GFV+FE E A K++E++NG LN K ++VG+ +
Sbjct: 211 FGKFGPSLSVKVMTDESGTSKGFGFVNFERHEDAQKAVEEMNGKELNGKKIYVGRAQKKG 270
Query: 191 EREKELGEKAKLF----------TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDG 240
ER+ EL K + N+Y+KN + +DE+L++ F P+GTITS +VM G
Sbjct: 271 ERQTELKRKFEQLKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGG 330
Query: 241 KSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRF--EMLKIE 298
+++GFGFV + SPE A KAV NG+ V K LY+ AQ+K ER L ++ M I
Sbjct: 331 RNKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYIALAQRKEERQAHLTNQYMQRMASIR 390
Query: 299 R-----LNRYQGVNLY 309
LN YQ + Y
Sbjct: 391 AVPNPVLNPYQPPSGY 406
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 122/235 (51%), Gaps = 17/235 (7%)
Query: 103 PSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETE 161
PS ++++ +L + +Y+ FS G ILS +V +D S GY +V+F+
Sbjct: 3 PSAPSYPTASLYVGDLHPEVSEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQP 62
Query: 162 EAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLK 221
A +++E +N ++ K V I +R+ L + N++IKN + +++ L
Sbjct: 63 ADAERALETMNFDVIKGKPV----RIMWSQRDPSLRKSG--VGNIFIKNLDKSIDNKALF 116
Query: 222 EMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKK 281
+ F +G I S +V+ ++ S+G+GFV +E+ + AE+A+ NG ++ + ++VGR + +
Sbjct: 117 DTFSAFGNILSCKVVCDEHGSKGYGFVHFETRDAAERAIDKMNGMLLNDRKVFVGRFKSR 176
Query: 282 AERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
ER EL R + N+Y+KN + +DD RL++ F FG S K
Sbjct: 177 KEREAELGARAKEF----------TNVYIKNFGEDMDDLRLKRLFGKFGPSLSVK 221
>gi|432865704|ref|XP_004070572.1| PREDICTED: embryonic polyadenylate-binding protein-like [Oryzias
latipes]
Length = 624
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 190/275 (69%), Positives = 222/275 (80%), Gaps = 4/275 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G + QP D E ALDTMN+D +KGRPIRIMWSQRDP+LRKSGVGN+FIKN+D SI
Sbjct: 53 GYAYINFQQP--ADAECALDTMNYDVIKGRPIRIMWSQRDPALRKSGVGNIFIKNIDDSI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFSAFG+ILSCKV DE+G SKGYGFVHFET+EAAN++IE +NGMLLN + VF
Sbjct: 111 DNKALYDTFSAFGNILSCKVVCDERG-SKGYGFVHFETQEAANRAIETMNGMLLNDRKVF 169
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GK 241
VG F RKERE E G K FTN+YIKNFG++ DEKLKE F +G S RVM ++ G+
Sbjct: 170 VGHFKSRKEREVEFGTKVMKFTNIYIKNFGDNLTDEKLKEAFSAFGKTLSVRVMRDEKGR 229
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
SRGFGFV Y E A+KAV NGKE++GKI+YVGRAQK+ ER ELKR+F+ LK +R+
Sbjct: 230 SRGFGFVNYAHHEDAQKAVDEMNGKEMNGKIIYVGRAQKRLERQGELKRKFDQLKQDRIQ 289
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLYVKNLDDSIDDERLRKEF+P+GTITSAK
Sbjct: 290 RYQGVNLYVKNLDDSIDDERLRKEFSPYGTITSAK 324
Score = 157 bits (398), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 79/191 (41%), Positives = 120/191 (62%), Gaps = 10/191 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
N++IKN ++ ++ + + FSAFG LS +V +DE+G S+G+GFV++ E A K+++++
Sbjct: 192 NIYIKNFGDNLTDEKLKEAFSAFGKTLSVRVMRDEKGRSRGFGFVNYAHHEDAQKAVDEM 251
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKLK 221
NG +N KI++VG+ R ER+ EL K N+Y+KN + +DE+L+
Sbjct: 252 NGKEMNGKIIYVGRAQKRLERQGELKRKFDQLKQDRIQRYQGVNLYVKNLDDSIDDERLR 311
Query: 222 EMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKK 281
+ F PYGTITS +VM G+S+GFGFV + SPE A KAV NG+ V K LYV AQ++
Sbjct: 312 KEFSPYGTITSAKVMTEAGQSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRR 371
Query: 282 AERTQELKRRF 292
ER L ++
Sbjct: 372 EERKAILTNKY 382
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 64/137 (46%), Gaps = 20/137 (14%)
Query: 203 FTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAV 260
++Y+ + D + L + F P G I S RV + +S G+ ++ ++ P AE A+
Sbjct: 10 LASLYVGDLHPDVTEAMLYQKFSPAGPIVSIRVCRDIITRRSLGYAYINFQQPADAECAL 69
Query: 261 QAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGV-NLYVKNLDDSIDD 319
N + G+ + + +Q+ R GV N+++KN+DDSID+
Sbjct: 70 DTMNYDVIKGRPIRIMWSQRDPAL-----------------RKSGVGNIFIKNIDDSIDN 112
Query: 320 ERLRKEFTPFGTITSAK 336
+ L F+ FG I S K
Sbjct: 113 KALYDTFSAFGNILSCK 129
>gi|432107630|gb|ELK32863.1| Polyadenylate-binding protein 1 [Myotis davidii]
Length = 565
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 185/254 (72%), Positives = 218/254 (85%), Gaps = 2/254 (0%)
Query: 84 MNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVA 143
MNFD +KG+P+RIMWSQRDPSLRKSGVGN+FIKNLDKSIDNKA+YDTFSAFG+ILSCKV
Sbjct: 1 MNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVV 60
Query: 144 QDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLF 203
DE G SKGYGFVHFET+EAA ++IEK+NGMLLN + VFVG+F RKERE ELG +AK F
Sbjct: 61 CDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEF 119
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQA 262
TNVYIKNFGED +DE+LK++F +G S +VM ++ GKS+GFGFV++E E A+KAV
Sbjct: 120 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDE 179
Query: 263 WNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERL 322
NGKE++GK +YVGRAQKK ER ELKR+FE +K +R+ RYQGVNLYVKNLDD IDDERL
Sbjct: 180 MNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERL 239
Query: 323 RKEFTPFGTITSAK 336
RKEF+PFGTITSAK
Sbjct: 240 RKEFSPFGTITSAK 253
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 93/232 (40%), Positives = 133/232 (57%), Gaps = 16/232 (6%)
Query: 77 TERALDTMNFDALKGRPIRI----MWSQRDPSL--RKSGVGNVFIKNLDKSIDNKAMYDT 130
ERA++ MN L R + + +R+ L R NV+IKN + +D++ + D
Sbjct: 80 AERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDL 139
Query: 131 FSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRK 190
F FG LS KV DE G SKG+GFV FE E A K+++++NG LN K ++VG+ +
Sbjct: 140 FGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKV 199
Query: 191 EREKELGEKAKLF----------TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDG 240
ER+ EL K + N+Y+KN + +DE+L++ F P+GTITS +VM G
Sbjct: 200 ERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGG 259
Query: 241 KSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRF 292
+S+GFGFV + SPE A KAV NG+ V K LYV AQ+K ER L ++
Sbjct: 260 RSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAHLTNQY 311
>gi|338728570|ref|XP_001492678.3| PREDICTED: polyadenylate-binding protein 1 [Equus caballus]
Length = 565
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 185/254 (72%), Positives = 218/254 (85%), Gaps = 2/254 (0%)
Query: 84 MNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVA 143
MNFD +KG+P+RIMWSQRDPSLRKSGVGN+FIKNLDKSIDNKA+YDTFSAFG+ILSCKV
Sbjct: 1 MNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVV 60
Query: 144 QDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLF 203
DE G SKGYGFVHFET+EAA ++IEK+NGMLLN + VFVG+F RKERE ELG +AK F
Sbjct: 61 CDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEF 119
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQA 262
TNVYIKNFGED +DE+LK++F +G S +VM ++ GKS+GFGFV++E E A+KAV
Sbjct: 120 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDE 179
Query: 263 WNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERL 322
NGKE++GK +YVGRAQKK ER ELKR+FE +K +R+ RYQGVNLYVKNLDD IDDERL
Sbjct: 180 MNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERL 239
Query: 323 RKEFTPFGTITSAK 336
RKEF+PFGTITSAK
Sbjct: 240 RKEFSPFGTITSAK 253
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 93/232 (40%), Positives = 133/232 (57%), Gaps = 16/232 (6%)
Query: 77 TERALDTMNFDALKGRPIRI----MWSQRDPSL--RKSGVGNVFIKNLDKSIDNKAMYDT 130
ERA++ MN L R + + +R+ L R NV+IKN + +D++ + D
Sbjct: 80 AERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDL 139
Query: 131 FSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRK 190
F FG LS KV DE G SKG+GFV FE E A K+++++NG LN K ++VG+ +
Sbjct: 140 FGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKV 199
Query: 191 EREKELGEKAKLF----------TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDG 240
ER+ EL K + N+Y+KN + +DE+L++ F P+GTITS +VM G
Sbjct: 200 ERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGG 259
Query: 241 KSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRF 292
+S+GFGFV + SPE A KAV NG+ V K LYV AQ+K ER L ++
Sbjct: 260 RSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAHLTNQY 311
>gi|344257059|gb|EGW13163.1| Polyadenylate-binding protein 1 [Cricetulus griseus]
Length = 565
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 185/254 (72%), Positives = 218/254 (85%), Gaps = 2/254 (0%)
Query: 84 MNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVA 143
MNFD +KG+P+RIMWSQRDPSLRKSGVGN+FIKNLDKSIDNKA+YDTFSAFG+ILSCKV
Sbjct: 1 MNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVV 60
Query: 144 QDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLF 203
DE G SKGYGFVHFET+EAA ++IEK+NGMLLN + VFVG+F RKERE ELG +AK F
Sbjct: 61 CDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEF 119
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQA 262
TNVYIKNFGED +DE+LK++F +G S +VM ++ GKS+GFGFV++E E A+KAV
Sbjct: 120 TNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDE 179
Query: 263 WNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERL 322
NGKE++GK +YVGRAQKK ER ELKR+FE +K +R+ RYQGVNLYVKNLDD IDDERL
Sbjct: 180 MNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERL 239
Query: 323 RKEFTPFGTITSAK 336
RKEF+PFGTITSAK
Sbjct: 240 RKEFSPFGTITSAK 253
Score = 158 bits (399), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 97/252 (38%), Positives = 139/252 (55%), Gaps = 20/252 (7%)
Query: 77 TERALDTMNFDALKGRPIRI----MWSQRDPSL--RKSGVGNVFIKNLDKSIDNKAMYDT 130
ERA++ MN L R + + +R+ L R NV+IKN + +D++ + D
Sbjct: 80 AERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDL 139
Query: 131 FSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRK 190
F FG LS KV DE G SKG+GFV FE E A K+++++NG LN K ++VG+ +
Sbjct: 140 FGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKV 199
Query: 191 EREKELGEKAKLF----------TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDG 240
ER+ EL K + N+Y+KN + +DE+L++ F P+GTITS +VM G
Sbjct: 200 ERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGG 259
Query: 241 KSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERL 300
+S+GFGFV + SPE A KAV NG+ V K YV AQ+K ER L + ++R+
Sbjct: 260 RSKGFGFVCFSSPEEATKAVTEMNGRIVATKPFYVALAQRKEERQAHLTNQH----MQRM 315
Query: 301 NRYQGVNLYVKN 312
Q V V N
Sbjct: 316 ASVQAVPNPVIN 327
>gi|148227710|ref|NP_001085351.1| embryonic polyadenylate-binding protein B [Xenopus laevis]
gi|82236619|sp|Q6GR16.1|EPABB_XENLA RecName: Full=Embryonic polyadenylate-binding protein B;
Short=Embryonic poly(A)-binding protein B; Short=ePAB-B;
Short=ePABP-B; AltName: Full=XePABP-B
gi|49257242|gb|AAH71118.1| MGC81363 protein [Xenopus laevis]
Length = 629
Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust.
Identities = 189/275 (68%), Positives = 222/275 (80%), Gaps = 4/275 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G + QP D ERALDTMNF+ +KGRPIRIMWSQRDP LRKSGVGNVFIKNLD SI
Sbjct: 53 GYAYINFQQP--ADAERALDTMNFEVIKGRPIRIMWSQRDPGLRKSGVGNVFIKNLDDSI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFSAFG ILSCKV DE G S+GYGFVHFET+EAAN++I+ +NGMLLN + VF
Sbjct: 111 DNKALYDTFSAFGDILSCKVVCDEYG-SRGYGFVHFETQEAANRAIQTMNGMLLNDRKVF 169
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGK 241
VG F R+ERE E G K FTNVYIKNFGED +D++LKE+F +G S +VM +N G+
Sbjct: 170 VGHFKSRRERELEYGAKVMEFTNVYIKNFGEDMDDKRLKEIFSAFGNTLSVKVMMDNSGR 229
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
SRGFGFV Y + E A+KAV NGKEV+G+++YVGRAQK+ ER ELKR+FE +K ER+N
Sbjct: 230 SRGFGFVNYGNHEEAQKAVTEMNGKEVNGRMVYVGRAQKRIERQGELKRKFEQIKQERIN 289
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLYVKNLDD IDD+RLRKEF+P+GTITS K
Sbjct: 290 RYQGVNLYVKNLDDGIDDDRLRKEFSPYGTITSTK 324
Score = 157 bits (396), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 91/230 (39%), Positives = 133/230 (57%), Gaps = 16/230 (6%)
Query: 79 RALDTMNFDALKGRPIRI--MWSQRDPSLRKSG----VGNVFIKNLDKSIDNKAMYDTFS 132
RA+ TMN L R + + S+R+ L NV+IKN + +D+K + + FS
Sbjct: 153 RAIQTMNGMLLNDRKVFVGHFKSRRERELEYGAKVMEFTNVYIKNFGEDMDDKRLKEIFS 212
Query: 133 AFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKER 192
AFG+ LS KV D G S+G+GFV++ E A K++ ++NG +N ++V+VG+ R ER
Sbjct: 213 AFGNTLSVKVMMDNSGRSRGFGFVNYGNHEEAQKAVTEMNGKEVNGRMVYVGRAQKRIER 272
Query: 193 EKELGEKAKLF----------TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDGKS 242
+ EL K + N+Y+KN + +D++L++ F PYGTITS +VM G S
Sbjct: 273 QGELKRKFEQIKQERINRYQGVNLYVKNLDDGIDDDRLRKEFSPYGTITSTKVMTEGGHS 332
Query: 243 RGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRF 292
+GFGFV + SPE A KAV NG+ V K LYV AQ+K ER L ++
Sbjct: 333 KGFGFVCFSSPEEATKAVTEMNGRIVSTKPLYVALAQRKEERKAILTNQY 382
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 66/137 (48%), Gaps = 20/137 (14%)
Query: 203 FTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDG--KSRGFGFVAYESPEFAEKAV 260
++YI + D + L E F P G I S RV + +S G+ ++ ++ P AE+A+
Sbjct: 10 LASLYIGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDIATRRSLGYAYINFQQPADAERAL 69
Query: 261 QAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGV-NLYVKNLDDSIDD 319
N + + G+ + + +Q+ R GV N+++KNLDDSID+
Sbjct: 70 DTMNFEVIKGRPIRIMWSQRDPGL-----------------RKSGVGNVFIKNLDDSIDN 112
Query: 320 ERLRKEFTPFGTITSAK 336
+ L F+ FG I S K
Sbjct: 113 KALYDTFSAFGDILSCK 129
>gi|260815191|ref|XP_002602357.1| hypothetical protein BRAFLDRAFT_234358 [Branchiostoma floridae]
gi|229287666|gb|EEN58369.1| hypothetical protein BRAFLDRAFT_234358 [Branchiostoma floridae]
Length = 620
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 186/276 (67%), Positives = 226/276 (81%), Gaps = 4/276 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD +KG+P+RIMWSQRDPSLRKSGVGNVFIKNLDKSI
Sbjct: 54 GYAYVNFQQP--ADAERALDTMNFDTIKGKPMRIMWSQRDPSLRKSGVGNVFIKNLDKSI 111
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFSAFG+ILSCKVAQDE G+SKG+GFVHFET+EAA++++ KVNGM+LN K V+
Sbjct: 112 DNKAIYDTFSAFGNILSCKVAQDETGSSKGFGFVHFETQEAADEAMAKVNGMMLNGKKVY 171
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GK 241
VG+F+PR ER +GE K FTN+Y+KNFG+ ++D+KL++ FE YG + S +VM +D G
Sbjct: 172 VGRFVPRSERLAAMGEAQKRFTNIYVKNFGDKWDDDKLRDFFEKYGKVVSAKVMTDDMGH 231
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEV-DGKILYVGRAQKKAERTQELKRRFEMLKIERL 300
SRGFGFV+YE P+ A KA + N EV DG+ +YVGRAQKKAER ELK +FE +K ER+
Sbjct: 232 SRGFGFVSYEEPDSAGKACEEMNDMEVDDGRRIYVGRAQKKAERQAELKAKFEKIKQERI 291
Query: 301 NRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLYVKNLD +ID+E LRKEF+ FGTITS+K
Sbjct: 292 QRYQGVNLYVKNLDSTIDEEILRKEFSQFGTITSSK 327
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 70/192 (36%), Positives = 115/192 (59%), Gaps = 11/192 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
N+++KN D+ + D F +G ++S KV D+ G+S+G+GFV +E ++A K+ E++
Sbjct: 194 NIYVKNFGDKWDDDKLRDFFEKYGKVVSAKVMTDDMGHSRGFGFVSYEEPDSAGKACEEM 253
Query: 172 NGMLLN-SKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKL 220
N M ++ + ++VG+ + ER+ EL K + N+Y+KN ++E L
Sbjct: 254 NDMEVDDGRRIYVGRAQKKAERQAELKAKFEKIKQERIQRYQGVNLYVKNLDSTIDEEIL 313
Query: 221 KEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
++ F +GTITS +VM +G+S+GFGFV + SPE A KAV NG+ V K LYV AQ+
Sbjct: 314 RKEFSQFGTITSSKVMTENGRSKGFGFVCFSSPEEATKAVTEMNGRIVVSKPLYVALAQR 373
Query: 281 KAERTQELKRRF 292
K +R +L ++
Sbjct: 374 KEDRKAQLASQY 385
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 71/232 (30%), Positives = 123/232 (53%), Gaps = 24/232 (10%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
++++ +LD I +Y+ FS G +LS +V +D S GY +V+F+ A +++
Sbjct: 11 CASLYVGDLDPDITEAMLYEKFSPAGPVLSIRVCRDMVTRRSLGYAYVNFQQPADAERAL 70
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N + K + I +R+ L + NV+IKN + +++ + + F +G
Sbjct: 71 DTMNFDTIKGKPM----RIMWSQRDPSLRKSG--VGNVFIKNLDKSIDNKAIYDTFSAFG 124
Query: 229 TITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQ- 286
I S +V ++ G S+GFGFV +E+ E A++A+ NG ++GK +YVGR ++ER
Sbjct: 125 NILSCKVAQDETGSSKGFGFVHFETQEAADEAMAKVNGMMLNGKKVYVGRFVPRSERLAA 184
Query: 287 --ELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
E ++RF N+YVKN D DD++LR F +G + SAK
Sbjct: 185 MGEAQKRF-------------TNIYVKNFGDKWDDDKLRDFFEKYGKVVSAK 223
>gi|82802759|gb|ABB92430.1| PABP3 [Chlorocebus sabaeus]
Length = 635
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 184/262 (70%), Positives = 219/262 (83%), Gaps = 2/262 (0%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D ERALDTMNFD +KG+P+RIMWSQRDPSLR+SGVGN+F+KNLDKSI+NK +YDT SAFG
Sbjct: 64 DAERALDTMNFDVIKGKPVRIMWSQRDPSLRRSGVGNIFVKNLDKSINNKVLYDTASAFG 123
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCKV DE G SKGYGFVHFET EAA ++IEK+NGMLLN + VFVG+F RKERE E
Sbjct: 124 NILSCKVVCDENG-SKGYGFVHFETHEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPE 254
LG +AK F NVYIKNFGED +DE+LK++F +G S +VM ++ GKS+GFGFV++E E
Sbjct: 183 LGARAKEFPNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHE 242
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A+KAV NGKE++GK +YVGRAQKK ER ELKR+FE +K +R+ RYQ VNLYVKNLD
Sbjct: 243 DAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQVVNLYVKNLD 302
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
D IDDERLRK F+PFGTITSAK
Sbjct: 303 DDIDDERLRKAFSPFGTITSAK 324
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 94/231 (40%), Positives = 133/231 (57%), Gaps = 16/231 (6%)
Query: 78 ERALDTMNFDALKGRPIRI----MWSQRDPSL--RKSGVGNVFIKNLDKSIDNKAMYDTF 131
ERA++ MN L R + + +R+ L R NV+IKN + +D++ + D F
Sbjct: 152 ERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFPNVYIKNFGEDMDDERLKDLF 211
Query: 132 SAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKE 191
FG LS KV DE G SKG+GFV FE E A K+++++NG LN K ++VG+ + E
Sbjct: 212 GKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVE 271
Query: 192 REKELGEKAKLF----------TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDGK 241
R+ EL K + N+Y+KN +D +DE+L++ F P+GTITS +VM G+
Sbjct: 272 RQTELKRKFEQMKQDRITRYQVVNLYVKNLDDDIDDERLRKAFSPFGTITSAKVMMEGGR 331
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRF 292
S+GFGFV + SPE A KAV NG+ V K LYV AQ+K ER L +
Sbjct: 332 SKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAHLTNEY 382
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 121/236 (51%), Gaps = 17/236 (7%)
Query: 102 DPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFET 160
+PS ++++ +L + +Y+ FS G ILS +V +D Y +V+F+
Sbjct: 2 NPSTPSYPTASLYVGDLHPDVTEAMLYEKFSRAGPILSIRVCRDVITRRYSSYAYVNFQH 61
Query: 161 EEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKL 220
+ A ++++ +N ++ K V + +R+ L N+++KN + N++ L
Sbjct: 62 PKDAERALDTMNFDVIKGKPVRIM----WSQRDPSLRRSG--VGNIFVKNLDKSINNKVL 115
Query: 221 KEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
+ +G I S +V+ ++ S+G+GFV +E+ E AE+A++ NG ++ + ++VGR +
Sbjct: 116 YDTASAFGNILSCKVVCDENGSKGYGFVHFETHEAAERAIEKMNGMLLNDRKVFVGRFKS 175
Query: 281 KAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ ER EL R + N+Y+KN + +DDERL+ F FG S K
Sbjct: 176 RKEREAELGARAKEFP----------NVYIKNFGEDMDDERLKDLFGKFGPALSVK 221
>gi|395745189|ref|XP_002824146.2| PREDICTED: polyadenylate-binding protein 1-like isoform 2 [Pongo
abelii]
Length = 636
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 185/262 (70%), Positives = 217/262 (82%), Gaps = 2/262 (0%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D E ALDTMNFD +KG+P+RIMWSQ DPSLRKSGVGN+F+KNLDKSI+NKA+YDT SAFG
Sbjct: 64 DAEHALDTMNFDVIKGKPVRIMWSQHDPSLRKSGVGNIFVKNLDKSINNKALYDTVSAFG 123
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCKV DE G SKGYGFVHFET EAA ++IEK+NGMLLN + VFVG+F RKERE E
Sbjct: 124 NILSCKVVCDENG-SKGYGFVHFETHEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPE 254
LG KAK F NVYIKNFGED +DE+LK++F +G S +VM ++ GKS+GFGFV++E E
Sbjct: 183 LGAKAKEFPNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFEKHE 242
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A+KAV NGKE+ GK +YVGRAQKK ER ELKR+FE +K +R+ RYQ VNLYVKNLD
Sbjct: 243 DAQKAVDEMNGKELSGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQVVNLYVKNLD 302
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
D IDDERLRK F+PFGTITSAK
Sbjct: 303 DDIDDERLRKAFSPFGTITSAK 324
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 92/232 (39%), Positives = 133/232 (57%), Gaps = 16/232 (6%)
Query: 77 TERALDTMNFDALKGRPIRI----MWSQRDPSL--RKSGVGNVFIKNLDKSIDNKAMYDT 130
ERA++ MN L R + + +R+ L + NV+IKN + +D++ + D
Sbjct: 151 AERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFPNVYIKNFGEDMDDERLKDL 210
Query: 131 FSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRK 190
F FG LS KV DE G SKG+GFV FE E A K+++++NG L+ K ++VG+ +
Sbjct: 211 FGKFGPALSVKVMTDESGKSKGFGFVSFEKHEDAQKAVDEMNGKELSGKQIYVGRAQKKV 270
Query: 191 EREKELGEKAKLF----------TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDG 240
ER+ EL K + N+Y+KN +D +DE+L++ F P+GTITS +VM G
Sbjct: 271 ERQTELKRKFEQMKQDRITRYQVVNLYVKNLDDDIDDERLRKAFSPFGTITSAKVMMEGG 330
Query: 241 KSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRF 292
+S+GFGFV + SPE A KAV NG+ V K LYV AQ+K ER L +
Sbjct: 331 RSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAYLTNEY 382
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 123/238 (51%), Gaps = 21/238 (8%)
Query: 102 DPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFET 160
+PS ++++ +L + +Y+ FS G ILS +V +D S Y +V+F+
Sbjct: 2 NPSTPSYPTASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDLITRRSSNYAYVNFQH 61
Query: 161 EEAANKSIEKVNGMLLNSKIVFV--GKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDE 218
+ A +++ +N ++ K V + + P R+ +G N+++KN + N++
Sbjct: 62 PKDAEHALDTMNFDVIKGKPVRIMWSQHDP-SLRKSGVG-------NIFVKNLDKSINNK 113
Query: 219 KLKEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRA 278
L + +G I S +V+ ++ S+G+GFV +E+ E AE+A++ NG ++ + ++VGR
Sbjct: 114 ALYDTVSAFGNILSCKVVCDENGSKGYGFVHFETHEAAERAIEKMNGMLLNDRKVFVGRF 173
Query: 279 QKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ + ER EL + + N+Y+KN + +DDERL+ F FG S K
Sbjct: 174 KSRKEREAELGAKAKEFP----------NVYIKNFGEDMDDERLKDLFGKFGPALSVK 221
>gi|82802755|gb|ABB92428.1| PABP3 [Pongo pygmaeus]
Length = 635
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 185/262 (70%), Positives = 217/262 (82%), Gaps = 2/262 (0%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D E ALDTMNFD +KG+P+RIMWSQ DPSLRKSGVGN+F+KNLDKSI+NKA+YDT SAFG
Sbjct: 64 DAEHALDTMNFDVIKGKPVRIMWSQHDPSLRKSGVGNIFVKNLDKSINNKALYDTVSAFG 123
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCKV DE G SKGYGFVHFET EAA ++IEK+NGMLLN + VFVG+F RKERE E
Sbjct: 124 NILSCKVVCDENG-SKGYGFVHFETHEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPE 254
LG KAK F NVYIKNFGED +DE+LK++F +G S +VM ++ GKS+GFGFV++E E
Sbjct: 183 LGAKAKEFPNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFEKHE 242
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A+KAV NGKE+ GK +YVGRAQKK ER ELKR+FE +K +R+ RYQ VNLYVKNLD
Sbjct: 243 DAQKAVDEMNGKELSGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQVVNLYVKNLD 302
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
D IDDERLRK F+PFGTITSAK
Sbjct: 303 DDIDDERLRKAFSPFGTITSAK 324
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 92/232 (39%), Positives = 131/232 (56%), Gaps = 16/232 (6%)
Query: 77 TERALDTMNFDALKGRPIRI----MWSQRDPSL--RKSGVGNVFIKNLDKSIDNKAMYDT 130
ERA++ MN L R + + +R+ L + NV+IKN + +D++ + D
Sbjct: 151 AERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFPNVYIKNFGEDMDDERLKDL 210
Query: 131 FSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRK 190
F FG LS KV DE G SKG+GFV FE E A K+++++NG L+ K ++VG+ +
Sbjct: 211 FGKFGPALSVKVMTDESGKSKGFGFVSFEKHEDAQKAVDEMNGKELSGKQIYVGRAQKKV 270
Query: 191 EREKELGEKAKLF----------TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDG 240
ER+ EL K + N+Y+KN +D +DE+L++ F P+GTITS +VM G
Sbjct: 271 ERQTELKRKFEQMKQDRITRYQVVNLYVKNLDDDIDDERLRKAFSPFGTITSAKVMMEGG 330
Query: 241 KSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRF 292
+SRGFGFV + SPE A KAV NG V K LYV A +K ER L +
Sbjct: 331 RSRGFGFVCFSSPEEATKAVTEMNGIIVATKPLYVSLAHRKEERQAYLTNEY 382
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 123/238 (51%), Gaps = 21/238 (8%)
Query: 102 DPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFET 160
+PS ++++ +L + +Y+ FS G ILS +V +D S Y +V+F+
Sbjct: 2 NPSTPSYPTASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDLITRRSSNYAYVNFQH 61
Query: 161 EEAANKSIEKVNGMLLNSKIVFV--GKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDE 218
+ A +++ +N ++ K V + + P R+ +G N+++KN + N++
Sbjct: 62 PKDAEHALDTMNFDVIKGKPVRIMWSQHDP-SLRKSGVG-------NIFVKNLDKSINNK 113
Query: 219 KLKEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRA 278
L + +G I S +V+ ++ S+G+GFV +E+ E AE+A++ NG ++ + ++VGR
Sbjct: 114 ALYDTVSAFGNILSCKVVCDENGSKGYGFVHFETHEAAERAIEKMNGMLLNDRKVFVGRF 173
Query: 279 QKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ + ER EL + + N+Y+KN + +DDERL+ F FG S K
Sbjct: 174 KSRKEREAELGAKAKEFP----------NVYIKNFGEDMDDERLKDLFGKFGPALSVK 221
>gi|82802761|gb|ABB92431.1| PABP3 [Aotus trivirgatus]
Length = 629
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 185/262 (70%), Positives = 217/262 (82%), Gaps = 2/262 (0%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D E ALDTMNFD +KG+P+RIMWSQ DPSLRKSGVGN+F+KNLDKSI+NKA+YDT SAFG
Sbjct: 64 DAEHALDTMNFDVIKGKPVRIMWSQHDPSLRKSGVGNIFVKNLDKSINNKALYDTVSAFG 123
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCKV DE G SKGYGFVHFET EAA ++IEK+NGMLLN + VFVG+F RKERE E
Sbjct: 124 NILSCKVVCDENG-SKGYGFVHFETHEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAE 182
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPE 254
LG KAK F NVYIKNFGED +DE+LK++F +G S +VM ++ GKS+GFGFV++E E
Sbjct: 183 LGAKAKEFPNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFEKHE 242
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A+KAV NGKE+ GK +YVGRAQKK ER ELKR+FE +K +R+ RYQ VNLYVKNLD
Sbjct: 243 DAQKAVDEMNGKELSGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQVVNLYVKNLD 302
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
D IDDERLRK F+PFGTITSAK
Sbjct: 303 DGIDDERLRKAFSPFGTITSAK 324
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 91/231 (39%), Positives = 132/231 (57%), Gaps = 16/231 (6%)
Query: 78 ERALDTMNFDALKGRPIRI----MWSQRDPSL--RKSGVGNVFIKNLDKSIDNKAMYDTF 131
ERA++ MN L R + + +R+ L + NV+IKN + +D++ + D F
Sbjct: 152 ERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEFPNVYIKNFGEDMDDERLKDLF 211
Query: 132 SAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKE 191
FG LS KV DE G SKG+GFV FE E A K+++++NG L+ K ++VG+ + E
Sbjct: 212 GKFGPALSVKVMTDESGKSKGFGFVSFEKHEDAQKAVDEMNGKELSGKQIYVGRAQKKVE 271
Query: 192 REKELGEKAKLF----------TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDGK 241
R+ EL K + N+Y+KN + +DE+L++ F P+GTITS +VM G+
Sbjct: 272 RQTELKRKFEQMKQDRITRYQVVNLYVKNLDDGIDDERLRKAFSPFGTITSAKVMMEGGR 331
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRF 292
S+GFGFV + SPE A KAV NG+ V K LYV AQ+K ER L +
Sbjct: 332 SKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAYLTNEY 382
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 123/238 (51%), Gaps = 21/238 (8%)
Query: 102 DPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFET 160
+PS ++++ +L + +Y+ FS G ILS +V +D S Y +V+F+
Sbjct: 2 NPSTPSYPTASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDLITRRSSNYAYVNFQH 61
Query: 161 EEAANKSIEKVNGMLLNSKIVFV--GKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDE 218
+ A +++ +N ++ K V + + P R+ +G N+++KN + N++
Sbjct: 62 PKDAEHALDTMNFDVIKGKPVRIMWSQHDP-SLRKSGVG-------NIFVKNLDKSINNK 113
Query: 219 KLKEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRA 278
L + +G I S +V+ ++ S+G+GFV +E+ E AE+A++ NG ++ + ++VGR
Sbjct: 114 ALYDTVSAFGNILSCKVVCDENGSKGYGFVHFETHEAAERAIEKMNGMLLNDRKVFVGRF 173
Query: 279 QKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ + ER EL + + N+Y+KN + +DDERL+ F FG S K
Sbjct: 174 KSRKEREAELGAKAKEFP----------NVYIKNFGEDMDDERLKDLFGKFGPALSVK 221
>gi|109120204|ref|XP_001091129.1| PREDICTED: polyadenylate-binding protein 1 isoform 2 [Macaca
mulatta]
Length = 637
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 184/262 (70%), Positives = 218/262 (83%), Gaps = 2/262 (0%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D ERALDTMNFD +KG+P+RIMWSQRDPSLR+SGVGN+F+KNLDKSI+NK +YDT SAFG
Sbjct: 64 DAERALDTMNFDVIKGKPVRIMWSQRDPSLRRSGVGNIFVKNLDKSINNKVLYDTVSAFG 123
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCKV DE G SKGYGFVHFET EAA ++IEK+NG LLN + VFVG+F RKERE E
Sbjct: 124 NILSCKVVCDENG-SKGYGFVHFETHEAAERAIEKMNGTLLNDRKVFVGRFKSRKEREAE 182
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPE 254
LG KAK F NVYIKNFGED +DE+LK++F +G S +VM ++ GKS+GFGFV++E E
Sbjct: 183 LGAKAKEFPNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHE 242
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A+KAV NGKE++GK +YVGRAQKK ER ELKR+FE +K +R+ RYQ VNLYVKNLD
Sbjct: 243 DAQKAVDEMNGKELNGKHIYVGRAQKKVERQTELKRKFEQMKQDRITRYQVVNLYVKNLD 302
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
D IDDERLRK F+PFGTITSAK
Sbjct: 303 DDIDDERLRKAFSPFGTITSAK 324
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 93/231 (40%), Positives = 133/231 (57%), Gaps = 16/231 (6%)
Query: 78 ERALDTMNFDALKGRPIRI----MWSQRDPSL--RKSGVGNVFIKNLDKSIDNKAMYDTF 131
ERA++ MN L R + + +R+ L + NV+IKN + +D++ + D F
Sbjct: 152 ERAIEKMNGTLLNDRKVFVGRFKSRKEREAELGAKAKEFPNVYIKNFGEDMDDERLKDLF 211
Query: 132 SAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKE 191
FG LS KV DE G SKG+GFV FE E A K+++++NG LN K ++VG+ + E
Sbjct: 212 GKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKHIYVGRAQKKVE 271
Query: 192 REKELGEKAKLF----------TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDGK 241
R+ EL K + N+Y+KN +D +DE+L++ F P+GTITS +VM G+
Sbjct: 272 RQTELKRKFEQMKQDRITRYQVVNLYVKNLDDDIDDERLRKAFSPFGTITSAKVMMEGGR 331
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRF 292
S+GFGFV + SPE A KAV NG+ V K LYV AQ+K ER L +
Sbjct: 332 SKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAHLTNEY 382
Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 122/236 (51%), Gaps = 17/236 (7%)
Query: 102 DPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFET 160
+PS ++++ +L + +Y+ FS G ILS +V +D S Y +V+F+
Sbjct: 2 NPSTPSYPTASLYVGDLHPDVTEAMLYEKFSRAGPILSIRVCRDVITRRSSSYAYVNFQH 61
Query: 161 EEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKL 220
+ A ++++ +N ++ K V + +R+ L N+++KN + N++ L
Sbjct: 62 PKDAERALDTMNFDVIKGKPVRIM----WSQRDPSLRRSG--VGNIFVKNLDKSINNKVL 115
Query: 221 KEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
+ +G I S +V+ ++ S+G+GFV +E+ E AE+A++ NG ++ + ++VGR +
Sbjct: 116 YDTVSAFGNILSCKVVCDENGSKGYGFVHFETHEAAERAIEKMNGTLLNDRKVFVGRFKS 175
Query: 281 KAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ ER EL + + N+Y+KN + +DDERL+ F FG S K
Sbjct: 176 RKEREAELGAKAKEFP----------NVYIKNFGEDMDDERLKDLFGKFGPALSVK 221
>gi|326931817|ref|XP_003212020.1| PREDICTED: embryonic polyadenylate-binding protein-like [Meleagris
gallopavo]
Length = 633
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 187/286 (65%), Positives = 226/286 (79%), Gaps = 8/286 (2%)
Query: 56 TCHQLGS----GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVG 111
C + S G + QP D ERALDTMNF+ +KGRP+RIMWSQRDP LRKSGVG
Sbjct: 42 VCRDVASRRSLGYAYINFQQP--ADAERALDTMNFEVIKGRPVRIMWSQRDPGLRKSGVG 99
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NVFIKNLD SIDNKA+YDTFSAFG+ILSCKV DE G S+G+GFVHFET+EAA ++IE +
Sbjct: 100 NVFIKNLDDSIDNKALYDTFSAFGNILSCKVVCDENG-SRGHGFVHFETQEAATRAIETM 158
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTIT 231
NGMLLN + VFVG F RKERE E G +A FTNVYIKNFG+D +D +L+E+F +G
Sbjct: 159 NGMLLNDRKVFVGHFKSRKEREAEFGARAMEFTNVYIKNFGDDMDDNRLREIFSRFGKTL 218
Query: 232 SYRVM-NNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKR 290
S +VM +N G+S+GFGFV +E E A+KAV NGKE++G+++YVGRAQK+ ER ELKR
Sbjct: 219 SVKVMMDNTGRSKGFGFVNFEKHEEAQKAVADMNGKEINGRMVYVGRAQKRLERQSELKR 278
Query: 291 RFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+FE +K ER++RYQGVNLYVKNLDD IDDERLRKEF+P+GTITSAK
Sbjct: 279 KFEQMKQERVSRYQGVNLYVKNLDDGIDDERLRKEFSPYGTITSAK 324
Score = 157 bits (396), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 83/191 (43%), Positives = 114/191 (59%), Gaps = 10/191 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV+IKN +D+ + + FS FG LS KV D G SKG+GFV+FE E A K++ +
Sbjct: 192 NVYIKNFGDDMDDNRLREIFSRFGKTLSVKVMMDNTGRSKGFGFVNFEKHEEAQKAVADM 251
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKLK 221
NG +N ++V+VG+ R ER+ EL K + N+Y+KN + +DE+L+
Sbjct: 252 NGKEINGRMVYVGRAQKRLERQSELKRKFEQMKQERVSRYQGVNLYVKNLDDGIDDERLR 311
Query: 222 EMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKK 281
+ F PYGTITS +VM G S+GFGFV + SPE A KAV NG+ V K LYV AQ+K
Sbjct: 312 KEFSPYGTITSAKVMTEGGHSKGFGFVCFSSPEEATKAVTEMNGRIVSTKPLYVALAQRK 371
Query: 282 AERTQELKRRF 292
ER L ++
Sbjct: 372 EERKAILTNQY 382
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 119/228 (52%), Gaps = 17/228 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQG-NSKGYGFVHFETEEAANKSI 168
+ ++++ +L + +Y+ FS G ILS +V +D S GY +++F+ A +++
Sbjct: 10 LASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVASRRSLGYAYINFQQPADAERAL 69
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N ++ + V + +++ G + NV+IKN + +++ L + F +G
Sbjct: 70 DTMNFEVIKGRPVRI------MWSQRDPGLRKSGVGNVFIKNLDDSIDNKALYDTFSAFG 123
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S +V+ ++ SRG GFV +E+ E A +A++ NG ++ + ++VG + + ER E
Sbjct: 124 NILSCKVVCDENGSRGHGFVHFETQEAATRAIETMNGMLLNDRKVFVGHFKSRKEREAEF 183
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
R + N+Y+KN D +DD RLR+ F+ FG S K
Sbjct: 184 GAR----------AMEFTNVYIKNFGDDMDDNRLREIFSRFGKTLSVK 221
>gi|355754577|gb|EHH58478.1| hypothetical protein EGM_08341 [Macaca fascicularis]
Length = 637
Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust.
Identities = 184/262 (70%), Positives = 217/262 (82%), Gaps = 2/262 (0%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D ERALDTMNFD +KG+P+RIMWSQRDPSLR+SGVGN+F+KNLDKSI+NK +YDT SAFG
Sbjct: 64 DAERALDTMNFDVIKGKPVRIMWSQRDPSLRRSGVGNIFVKNLDKSINNKVLYDTVSAFG 123
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCKV DE G SKGYGFVHFET EAA ++IEK+NG LLN + VFVG+F RKERE E
Sbjct: 124 NILSCKVVCDENG-SKGYGFVHFETHEAAERAIEKMNGTLLNDRKVFVGRFKSRKEREAE 182
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPE 254
LG KAK F NVYIKNFGED +DE+LK++F +G S +VM ++ GKS+GFGFV++E E
Sbjct: 183 LGAKAKEFPNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHE 242
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A KAV NGKE++GK +YVGRAQKK ER ELKR+FE +K +R+ RYQ VNLYVKNLD
Sbjct: 243 DARKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQVVNLYVKNLD 302
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
D IDDERLRK F+PFGTITSAK
Sbjct: 303 DDIDDERLRKAFSPFGTITSAK 324
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 93/231 (40%), Positives = 134/231 (58%), Gaps = 16/231 (6%)
Query: 78 ERALDTMNFDALKGRPIRI----MWSQRDPSL--RKSGVGNVFIKNLDKSIDNKAMYDTF 131
ERA++ MN L R + + +R+ L + NV+IKN + +D++ + D F
Sbjct: 152 ERAIEKMNGTLLNDRKVFVGRFKSRKEREAELGAKAKEFPNVYIKNFGEDMDDERLKDLF 211
Query: 132 SAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKE 191
FG LS KV DE G SKG+GFV FE E A K+++++NG LN K ++VG+ + E
Sbjct: 212 GKFGPALSVKVMTDESGKSKGFGFVSFERHEDARKAVDEMNGKELNGKQIYVGRAQKKVE 271
Query: 192 REKELGEKAKLF----------TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDGK 241
R+ EL K + N+Y+KN +D +DE+L++ F P+GTITS +VM G+
Sbjct: 272 RQTELKRKFEQMKQDRITRYQVVNLYVKNLDDDIDDERLRKAFSPFGTITSAKVMMEGGR 331
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRF 292
S+GFGFV + SPE A KAV NG+ V K LYV AQ+K ER L ++
Sbjct: 332 SKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAHLTNQY 382
Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 122/236 (51%), Gaps = 17/236 (7%)
Query: 102 DPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFET 160
+PS ++++ +L + +Y+ FS G ILS +V +D S Y +V+F+
Sbjct: 2 NPSTPSYPTASLYVGDLHPDVTEAMLYEKFSRAGPILSIRVCRDVITRRSSSYAYVNFQH 61
Query: 161 EEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKL 220
+ A ++++ +N ++ K V + +R+ L N+++KN + N++ L
Sbjct: 62 PKDAERALDTMNFDVIKGKPVRIM----WSQRDPSLRRSG--VGNIFVKNLDKSINNKVL 115
Query: 221 KEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
+ +G I S +V+ ++ S+G+GFV +E+ E AE+A++ NG ++ + ++VGR +
Sbjct: 116 YDTVSAFGNILSCKVVCDENGSKGYGFVHFETHEAAERAIEKMNGTLLNDRKVFVGRFKS 175
Query: 281 KAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ ER EL + + N+Y+KN + +DDERL+ F FG S K
Sbjct: 176 RKEREAELGAKAKEFP----------NVYIKNFGEDMDDERLKDLFGKFGPALSVK 221
>gi|327271804|ref|XP_003220677.1| PREDICTED: embryonic polyadenylate-binding protein-like [Anolis
carolinensis]
Length = 635
Score = 383 bits (983), Expect = e-104, Method: Compositional matrix adjust.
Identities = 186/275 (67%), Positives = 223/275 (81%), Gaps = 4/275 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G + QP D ERALDTMNF+ +KGRPIRIMWSQRDP LRKSGVGN+FIKNLD SI
Sbjct: 53 GYAYINFQQP--ADAERALDTMNFEVIKGRPIRIMWSQRDPGLRKSGVGNIFIKNLDDSI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFSAFG+ILSCKV DE G S+GYGFVHFET EAAN++I +NGMLLN + VF
Sbjct: 111 DNKALYDTFSAFGNILSCKVVCDENG-SRGYGFVHFETHEAANRAIATMNGMLLNDRKVF 169
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGK 241
VG F R+ERE E G KA FTNVYIKNFGE+ ++E+L+E F +G S +VM +N G+
Sbjct: 170 VGNFKSRREREAEYGAKAMEFTNVYIKNFGEEMSNERLQETFSIFGKTLSVKVMTDNIGR 229
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
S+GFGFV +E + A+KAV+ NGKE++G++LYVGRAQK+ ER ELKR+FE +K ER++
Sbjct: 230 SKGFGFVNFEKHQDAQKAVEDMNGKEINGRMLYVGRAQKRMERQSELKRKFEQIKQERVS 289
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLYVKNLDD IDDERLRKEF+P+GTITSAK
Sbjct: 290 RYQGVNLYVKNLDDGIDDERLRKEFSPYGTITSAK 324
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 86/204 (42%), Positives = 122/204 (59%), Gaps = 11/204 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV+IKN + + N+ + +TFS FG LS KV D G SKG+GFV+FE + A K++E +
Sbjct: 192 NVYIKNFGEEMSNERLQETFSIFGKTLSVKVMTDNIGRSKGFGFVNFEKHQDAQKAVEDM 251
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKLK 221
NG +N ++++VG+ R ER+ EL K + N+Y+KN + +DE+L+
Sbjct: 252 NGKEINGRMLYVGRAQKRMERQSELKRKFEQIKQERVSRYQGVNLYVKNLDDGIDDERLR 311
Query: 222 EMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKK 281
+ F PYGTITS +VM G S+GFGFV + SPE A KAV NG+ V K LYV AQ+K
Sbjct: 312 KEFSPYGTITSAKVMTEGGHSKGFGFVCFSSPEEATKAVTEMNGRIVSTKPLYVALAQRK 371
Query: 282 AERTQELKRRFEMLKIERLNRYQG 305
ER L ++ M ++ L G
Sbjct: 372 EERKAILTNQY-MQRLATLRTLPG 394
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 66/137 (48%), Gaps = 20/137 (14%)
Query: 203 FTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDG--KSRGFGFVAYESPEFAEKAV 260
++Y+ + D + L E F P G I S RV + +S G+ ++ ++ P AE+A+
Sbjct: 10 LASLYVGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDVATRRSLGYAYINFQQPADAERAL 69
Query: 261 QAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGV-NLYVKNLDDSIDD 319
N + + G+ + + +Q+ R GV N+++KNLDDSID+
Sbjct: 70 DTMNFEVIKGRPIRIMWSQRDPGL-----------------RKSGVGNIFIKNLDDSIDN 112
Query: 320 ERLRKEFTPFGTITSAK 336
+ L F+ FG I S K
Sbjct: 113 KALYDTFSAFGNILSCK 129
>gi|74189486|dbj|BAE22747.1| unnamed protein product [Mus musculus]
Length = 590
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 184/254 (72%), Positives = 217/254 (85%), Gaps = 2/254 (0%)
Query: 84 MNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVA 143
MNFD +KG+PIRIMWSQRDPSLRKSGVGNVFIKNLD+SIDNKA+YDTFSAFG+ILSCKV
Sbjct: 1 MNFDVMKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDESIDNKALYDTFSAFGNILSCKVV 60
Query: 144 QDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLF 203
DE G SKGY FVHFET+EAA+K+IEK+NGMLLN + VFVG+F RKERE ELG KAK F
Sbjct: 61 CDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKAKEF 119
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPEFAEKAVQA 262
TNVYIKNFGE+ +D LKE+F +G S +VM ++ GKS+GFGFV+YE E A KAV+
Sbjct: 120 TNVYIKNFGEEVDDGNLKELFSQFGKTLSVKVMRDSSGKSKGFGFVSYEKHEDANKAVEE 179
Query: 263 WNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERL 322
NGKE+ GK ++VGRAQKK ER ELKR+FE LK ER++RYQGVNLY+KNLDD+IDDE+L
Sbjct: 180 MNGKEMSGKAIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKL 239
Query: 323 RKEFTPFGTITSAK 336
R+EF+PFG+ITSAK
Sbjct: 240 RREFSPFGSITSAK 253
Score = 160 bits (406), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 84/191 (43%), Positives = 118/191 (61%), Gaps = 10/191 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV+IKN + +D+ + + FS FG LS KV +D G SKG+GFV +E E ANK++E++
Sbjct: 121 NVYIKNFGEEVDDGNLKELFSQFGKTLSVKVMRDSSGKSKGFGFVSYEKHEDANKAVEEM 180
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKLK 221
NG ++ K +FVG+ + ER+ EL K + N+YIKN + +DEKL+
Sbjct: 181 NGKEMSGKAIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLR 240
Query: 222 EMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKK 281
F P+G+ITS +VM DG+S+GFGFV + SPE A KAV NG+ V K LYV AQ+K
Sbjct: 241 REFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRK 300
Query: 282 AERTQELKRRF 292
ER L ++
Sbjct: 301 EERKAHLTNQY 311
>gi|118100597|ref|XP_417367.2| PREDICTED: embryonic polyadenylate-binding protein-like [Gallus
gallus]
Length = 632
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 185/286 (64%), Positives = 226/286 (79%), Gaps = 8/286 (2%)
Query: 56 TCHQLGS----GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVG 111
C + S G + QP D ERALDTMNF+ +KGRP+RIMWSQRDP LRKSGVG
Sbjct: 42 VCRDVASRRSLGYAYINFQQP--ADAERALDTMNFEVIKGRPVRIMWSQRDPGLRKSGVG 99
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NVFIKNLD SIDNKA+YDTFSAFG+ILSCKV DE G S+G+GFVHFET+EAA ++I+ +
Sbjct: 100 NVFIKNLDDSIDNKALYDTFSAFGNILSCKVVCDENG-SRGHGFVHFETQEAATRAIQTM 158
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTIT 231
NGMLLN + VFVG F RKERE E G +A FTNVYIKNFG+D +D +L+E+F +G
Sbjct: 159 NGMLLNDRKVFVGHFKSRKEREAEFGARAMEFTNVYIKNFGDDMDDNRLREIFSRFGKTL 218
Query: 232 SYRVM-NNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKR 290
S +VM ++ G+S+GFGFV +E E A+KAV NGKE++G+++YVGRAQK+ ER ELKR
Sbjct: 219 SVKVMMDHTGRSKGFGFVNFEKHEEAQKAVADMNGKEINGRMVYVGRAQKRLERQSELKR 278
Query: 291 RFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+FE +K ER++RYQGVNLYVKNLDD IDDERLRKEF+P+GTITSAK
Sbjct: 279 KFEQMKQERVSRYQGVNLYVKNLDDGIDDERLRKEFSPYGTITSAK 324
Score = 157 bits (397), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 83/191 (43%), Positives = 114/191 (59%), Gaps = 10/191 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV+IKN +D+ + + FS FG LS KV D G SKG+GFV+FE E A K++ +
Sbjct: 192 NVYIKNFGDDMDDNRLREIFSRFGKTLSVKVMMDHTGRSKGFGFVNFEKHEEAQKAVADM 251
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKLK 221
NG +N ++V+VG+ R ER+ EL K + N+Y+KN + +DE+L+
Sbjct: 252 NGKEINGRMVYVGRAQKRLERQSELKRKFEQMKQERVSRYQGVNLYVKNLDDGIDDERLR 311
Query: 222 EMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKK 281
+ F PYGTITS +VM G S+GFGFV + SPE A KAV NG+ V K LYV AQ+K
Sbjct: 312 KEFSPYGTITSAKVMTEGGHSKGFGFVCFSSPEEATKAVTEMNGRIVSTKPLYVALAQRK 371
Query: 282 AERTQELKRRF 292
ER L ++
Sbjct: 372 EERKAILTNQY 382
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 119/228 (52%), Gaps = 17/228 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQG-NSKGYGFVHFETEEAANKSI 168
+ ++++ +L + +Y+ FS G ILS +V +D S GY +++F+ A +++
Sbjct: 10 LASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVASRRSLGYAYINFQQPADAERAL 69
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N ++ + V + +++ G + NV+IKN + +++ L + F +G
Sbjct: 70 DTMNFEVIKGRPVRI------MWSQRDPGLRKSGVGNVFIKNLDDSIDNKALYDTFSAFG 123
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S +V+ ++ SRG GFV +E+ E A +A+Q NG ++ + ++VG + + ER E
Sbjct: 124 NILSCKVVCDENGSRGHGFVHFETQEAATRAIQTMNGMLLNDRKVFVGHFKSRKEREAEF 183
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
R + N+Y+KN D +DD RLR+ F+ FG S K
Sbjct: 184 GAR----------AMEFTNVYIKNFGDDMDDNRLREIFSRFGKTLSVK 221
>gi|73909065|gb|AAH45608.1| Poly(A) binding protein, cytoplasmic 3 [Homo sapiens]
Length = 631
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 183/262 (69%), Positives = 217/262 (82%), Gaps = 2/262 (0%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D E ALDTMNFD +KG+P+RIMWSQRDPSLRKSGVGN+F+KNLDKSI+NKA+YDT SAFG
Sbjct: 64 DAEHALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFVKNLDKSINNKALYDTVSAFG 123
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSC V DE G SKGYGFVHFET EAA ++I+K+NGMLLN + VFVG+F RKERE E
Sbjct: 124 NILSCNVVCDENG-SKGYGFVHFETHEAAERAIKKMNGMLLNGRKVFVGQFKSRKEREAE 182
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPE 254
LG +AK F NVYIKNFGED +DE+LK++F +G S +VM ++ GKS+GFGFV++E E
Sbjct: 183 LGARAKEFPNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHE 242
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A+KAV NGKE++GK +YVGRAQKK ER ELKR FE +K +R+ RYQ VNLYVKNLD
Sbjct: 243 DAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRTFEQMKQDRITRYQVVNLYVKNLD 302
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
D IDDERLRK F+PFGTITSAK
Sbjct: 303 DGIDDERLRKAFSPFGTITSAK 324
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 95/231 (41%), Positives = 133/231 (57%), Gaps = 16/231 (6%)
Query: 78 ERALDTMNFDALKGRPIRI----MWSQRDPSL--RKSGVGNVFIKNLDKSIDNKAMYDTF 131
ERA+ MN L GR + + +R+ L R NV+IKN + +D++ + D F
Sbjct: 152 ERAIKKMNGMLLNGRKVFVGQFKSRKEREAELGARAKEFPNVYIKNFGEDMDDERLKDLF 211
Query: 132 SAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKE 191
FG LS KV DE G SKG+GFV FE E A K+++++NG LN K ++VG+ + E
Sbjct: 212 GKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVE 271
Query: 192 REKELG---EKAKL-------FTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDGK 241
R+ EL E+ K N+Y+KN + +DE+L++ F P+GTITS +VM G+
Sbjct: 272 RQTELKRTFEQMKQDRITRYQVVNLYVKNLDDGIDDERLRKAFSPFGTITSAKVMMEGGR 331
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRF 292
S+GFGFV + SPE A KAV NG+ V K LYV AQ+K ER L +
Sbjct: 332 SKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAYLTNEY 382
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 122/236 (51%), Gaps = 17/236 (7%)
Query: 102 DPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFET 160
+PS ++++ +L + +Y+ FS G ILS ++ +D S Y +V+F+
Sbjct: 2 NPSTPSYPTASLYVGDLHPDVTEAMLYEKFSPAGPILSIRICRDLITSGSSNYAYVNFQH 61
Query: 161 EEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKL 220
+ A +++ +N ++ K V I +R+ L + N+++KN + N++ L
Sbjct: 62 TKDAEHALDTMNFDVIKGKPV----RIMWSQRDPSLRKSG--VGNIFVKNLDKSINNKAL 115
Query: 221 KEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
+ +G I S V+ ++ S+G+GFV +E+ E AE+A++ NG ++G+ ++VG+ +
Sbjct: 116 YDTVSAFGNILSCNVVCDENGSKGYGFVHFETHEAAERAIKKMNGMLLNGRKVFVGQFKS 175
Query: 281 KAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ ER EL R + N+Y+KN + +DDERL+ F FG S K
Sbjct: 176 RKEREAELGARAKEFP----------NVYIKNFGEDMDDERLKDLFGKFGPALSVK 221
>gi|82802749|gb|ABB92425.1| PABP3 [Homo sapiens]
Length = 630
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 183/262 (69%), Positives = 217/262 (82%), Gaps = 2/262 (0%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D E ALDTMNFD +KG+P+RIMWSQRDPSLRKSGVGN+F+KNLDKSI+NKA+YDT SAFG
Sbjct: 64 DAEHALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFVKNLDKSINNKALYDTVSAFG 123
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSC V DE G SKGYGFVHFET EAA ++I+K+NGMLLN + VFVG+F RKERE E
Sbjct: 124 NILSCNVVCDENG-SKGYGFVHFETHEAAERAIKKMNGMLLNGRKVFVGQFKSRKEREAE 182
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPE 254
LG +AK F NVYIKNFGED +DE+LK++F +G S +VM ++ GKS+GFGFV++E E
Sbjct: 183 LGARAKEFPNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHE 242
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A+KAV NGKE++GK +YVGRAQKK ER ELKR FE +K +R+ RYQ VNLYVKNLD
Sbjct: 243 DAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRTFEQMKQDRITRYQVVNLYVKNLD 302
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
D IDDERLRK F+PFGTITSAK
Sbjct: 303 DGIDDERLRKAFSPFGTITSAK 324
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 95/231 (41%), Positives = 133/231 (57%), Gaps = 16/231 (6%)
Query: 78 ERALDTMNFDALKGRPIRI----MWSQRDPSL--RKSGVGNVFIKNLDKSIDNKAMYDTF 131
ERA+ MN L GR + + +R+ L R NV+IKN + +D++ + D F
Sbjct: 152 ERAIKKMNGMLLNGRKVFVGQFKSRKEREAELGARAKEFPNVYIKNFGEDMDDERLKDLF 211
Query: 132 SAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKE 191
FG LS KV DE G SKG+GFV FE E A K+++++NG LN K ++VG+ + E
Sbjct: 212 GKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVE 271
Query: 192 REKELG---EKAKL-------FTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDGK 241
R+ EL E+ K N+Y+KN + +DE+L++ F P+GTITS +VM G+
Sbjct: 272 RQTELKRTFEQMKQDRITRYQVVNLYVKNLDDGIDDERLRKAFSPFGTITSAKVMMEGGR 331
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRF 292
S+GFGFV + SPE A KAV NG+ V K LYV AQ+K ER L +
Sbjct: 332 SKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAYLTNEY 382
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 122/236 (51%), Gaps = 17/236 (7%)
Query: 102 DPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFET 160
+PS ++++ +L + +Y+ FS G ILS ++ +D S Y +V+F+
Sbjct: 2 NPSTPSYPTASLYVGDLHPDVTEAMLYEKFSPAGPILSIRICRDLITSGSSNYAYVNFQH 61
Query: 161 EEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKL 220
+ A +++ +N ++ K V I +R+ L + N+++KN + N++ L
Sbjct: 62 TKDAEHALDTMNFDVIKGKPV----RIMWSQRDPSLRKSG--VGNIFVKNLDKSINNKAL 115
Query: 221 KEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
+ +G I S V+ ++ S+G+GFV +E+ E AE+A++ NG ++G+ ++VG+ +
Sbjct: 116 YDTVSAFGNILSCNVVCDENGSKGYGFVHFETHEAAERAIKKMNGMLLNGRKVFVGQFKS 175
Query: 281 KAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ ER EL R + N+Y+KN + +DDERL+ F FG S K
Sbjct: 176 RKEREAELGARAKEFP----------NVYIKNFGEDMDDERLKDLFGKFGPALSVK 221
>gi|45238849|ref|NP_112241.2| polyadenylate-binding protein 3 [Homo sapiens]
gi|28201852|sp|Q9H361.2|PABP3_HUMAN RecName: Full=Polyadenylate-binding protein 3; Short=PABP-3;
Short=Poly(A)-binding protein 3; AltName:
Full=Testis-specific poly(A)-binding protein
gi|20379668|gb|AAH27617.1| Poly(A) binding protein, cytoplasmic 3 [Homo sapiens]
gi|119628765|gb|EAX08360.1| poly(A) binding protein, cytoplasmic 3 [Homo sapiens]
gi|123982576|gb|ABM83029.1| poly(A) binding protein, cytoplasmic 3 [synthetic construct]
gi|123997243|gb|ABM86223.1| poly(A) binding protein, cytoplasmic 3 [synthetic construct]
gi|189055351|dbj|BAG36140.1| unnamed protein product [Homo sapiens]
Length = 631
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 183/262 (69%), Positives = 217/262 (82%), Gaps = 2/262 (0%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D E ALDTMNFD +KG+P+RIMWSQRDPSLRKSGVGN+F+KNLDKSI+NKA+YDT SAFG
Sbjct: 64 DAEHALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFVKNLDKSINNKALYDTVSAFG 123
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSC V DE G SKGYGFVHFET EAA ++I+K+NGMLLN + VFVG+F RKERE E
Sbjct: 124 NILSCNVVCDENG-SKGYGFVHFETHEAAERAIKKMNGMLLNGRKVFVGQFKSRKEREAE 182
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPE 254
LG +AK F NVYIKNFGED +DE+LK++F +G S +VM ++ GKS+GFGFV++E E
Sbjct: 183 LGARAKEFPNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHE 242
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A+KAV NGKE++GK +YVGRAQKK ER ELKR FE +K +R+ RYQ VNLYVKNLD
Sbjct: 243 DAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRTFEQMKQDRITRYQVVNLYVKNLD 302
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
D IDDERLRK F+PFGTITSAK
Sbjct: 303 DGIDDERLRKAFSPFGTITSAK 324
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 95/231 (41%), Positives = 133/231 (57%), Gaps = 16/231 (6%)
Query: 78 ERALDTMNFDALKGRPIRI----MWSQRDPSL--RKSGVGNVFIKNLDKSIDNKAMYDTF 131
ERA+ MN L GR + + +R+ L R NV+IKN + +D++ + D F
Sbjct: 152 ERAIKKMNGMLLNGRKVFVGQFKSRKEREAELGARAKEFPNVYIKNFGEDMDDERLKDLF 211
Query: 132 SAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKE 191
FG LS KV DE G SKG+GFV FE E A K+++++NG LN K ++VG+ + E
Sbjct: 212 GKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVE 271
Query: 192 REKELG---EKAKL-------FTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDGK 241
R+ EL E+ K N+Y+KN + +DE+L++ F P+GTITS +VM G+
Sbjct: 272 RQTELKRTFEQMKQDRITRYQVVNLYVKNLDDGIDDERLRKAFSPFGTITSAKVMMEGGR 331
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRF 292
S+GFGFV + SPE A KAV NG+ V K LYV AQ+K ER L +
Sbjct: 332 SKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAYLTNEY 382
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 122/236 (51%), Gaps = 17/236 (7%)
Query: 102 DPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFET 160
+PS ++++ +L + +Y+ FS G ILS ++ +D S Y +V+F+
Sbjct: 2 NPSTPSYPTASLYVGDLHPDVTEAMLYEKFSPAGPILSIRICRDLITSGSSNYAYVNFQH 61
Query: 161 EEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKL 220
+ A +++ +N ++ K V I +R+ L + N+++KN + N++ L
Sbjct: 62 TKDAEHALDTMNFDVIKGKPV----RIMWSQRDPSLRKSG--VGNIFVKNLDKSINNKAL 115
Query: 221 KEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
+ +G I S V+ ++ S+G+GFV +E+ E AE+A++ NG ++G+ ++VG+ +
Sbjct: 116 YDTVSAFGNILSCNVVCDENGSKGYGFVHFETHEAAERAIKKMNGMLLNGRKVFVGQFKS 175
Query: 281 KAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ ER EL R + N+Y+KN + +DDERL+ F FG S K
Sbjct: 176 RKEREAELGARAKEFP----------NVYIKNFGEDMDDERLKDLFGKFGPALSVK 221
>gi|397482906|ref|XP_003812655.1| PREDICTED: polyadenylate-binding protein 3-like [Pan paniscus]
Length = 634
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 183/262 (69%), Positives = 217/262 (82%), Gaps = 2/262 (0%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D E ALDTMNFD +KG+P+RIMWSQRDPSLRKSG+GN+F+KNLDKSI+NKA+YDT SAFG
Sbjct: 64 DAEHALDTMNFDVIKGKPLRIMWSQRDPSLRKSGMGNIFVKNLDKSINNKALYDTVSAFG 123
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSC V DE G SKGYGFVHFET EAA ++IEK+NGMLLN + VFVG+F RKERE E
Sbjct: 124 NILSCNVVCDENG-SKGYGFVHFETHEAAERAIEKMNGMLLNGRKVFVGQFKSRKEREAE 182
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPE 254
LG +AK F NVYIKNFGED +DE+LK++F +G S +VM ++ GKS+GFGFV++E E
Sbjct: 183 LGARAKEFPNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHE 242
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A+KAV NGKE++GK +YVGRAQKK ER ELKR FE +K +R+ RYQ VNLYVKNLD
Sbjct: 243 DAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRTFEQMKQDRITRYQVVNLYVKNLD 302
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
D IDDERLRK F+PFGTITSAK
Sbjct: 303 DDIDDERLRKAFSPFGTITSAK 324
Score = 163 bits (413), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 96/231 (41%), Positives = 135/231 (58%), Gaps = 16/231 (6%)
Query: 78 ERALDTMNFDALKGRPIRI----MWSQRDPSL--RKSGVGNVFIKNLDKSIDNKAMYDTF 131
ERA++ MN L GR + + +R+ L R NV+IKN + +D++ + D F
Sbjct: 152 ERAIEKMNGMLLNGRKVFVGQFKSRKEREAELGARAKEFPNVYIKNFGEDMDDERLKDLF 211
Query: 132 SAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKE 191
FG LS KV DE G SKG+GFV FE E A K+++++NG LN K ++VG+ + E
Sbjct: 212 GKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVE 271
Query: 192 REKELG---EKAKL-------FTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDGK 241
R+ EL E+ K N+Y+KN +D +DE+L++ F P+GTITS +VM G+
Sbjct: 272 RQTELKRTFEQMKQDRITRYQVVNLYVKNLDDDIDDERLRKAFSPFGTITSAKVMMEGGR 331
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRF 292
S+GFGFV + SPE A KAV NG+ V K LYV AQ+K ER L +
Sbjct: 332 SKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAYLTNEY 382
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 125/237 (52%), Gaps = 19/237 (8%)
Query: 102 DPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQD--EQGNSKGYGFVHFE 159
+PS ++++ +L + +Y+ FS G ILS +V +D +G+S Y +V+F+
Sbjct: 2 NPSTPSYPTASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDLITRGSS-NYAYVNFQ 60
Query: 160 TEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEK 219
+ A +++ +N ++ K + I +R+ L + N+++KN + N++
Sbjct: 61 HPKDAEHALDTMNFDVIKGKPL----RIMWSQRDPSLRKSG--MGNIFVKNLDKSINNKA 114
Query: 220 LKEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQ 279
L + +G I S V+ ++ S+G+GFV +E+ E AE+A++ NG ++G+ ++VG+ +
Sbjct: 115 LYDTVSAFGNILSCNVVCDENGSKGYGFVHFETHEAAERAIEKMNGMLLNGRKVFVGQFK 174
Query: 280 KKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ ER EL R + N+Y+KN + +DDERL+ F FG S K
Sbjct: 175 SRKEREAELGARAKEFP----------NVYIKNFGEDMDDERLKDLFGKFGPALSVK 221
>gi|11610605|gb|AAG38953.1|AF132026_1 testis-specific poly(A)-binding protein [Homo sapiens]
Length = 631
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 183/262 (69%), Positives = 217/262 (82%), Gaps = 2/262 (0%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D E ALDTMNFD +KG+P+RIMWSQRDPSLRKSGVGN+F+KNLDKSI+NKA+YDT SAFG
Sbjct: 64 DAEHALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFVKNLDKSINNKALYDTVSAFG 123
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSC V DE G SKGYGFVHFET EAA ++I+K+NGMLLN + VFVG+F RKERE E
Sbjct: 124 NILSCNVVCDENG-SKGYGFVHFETHEAAERAIKKMNGMLLNGRKVFVGQFKSRKEREAE 182
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPE 254
LG +AK F NVYIKNFGED +DE+LK++F +G S +VM ++ GKS+GFGFV++E E
Sbjct: 183 LGARAKEFPNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHE 242
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A+KAV NGKE++GK +YVGRAQKK ER ELKR FE +K +R+ RYQ VNLYVKNLD
Sbjct: 243 DAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRTFEQMKQDRITRYQVVNLYVKNLD 302
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
D IDDERLRK F+PFGTITSAK
Sbjct: 303 DGIDDERLRKAFSPFGTITSAK 324
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 95/231 (41%), Positives = 133/231 (57%), Gaps = 16/231 (6%)
Query: 78 ERALDTMNFDALKGRPIRI----MWSQRDPSL--RKSGVGNVFIKNLDKSIDNKAMYDTF 131
ERA+ MN L GR + + +R+ L R NV+IKN + +D++ + D F
Sbjct: 152 ERAIKKMNGMLLNGRKVFVGQFKSRKEREAELGARAKEFPNVYIKNFGEDMDDERLKDLF 211
Query: 132 SAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKE 191
FG LS KV DE G SKG+GFV FE E A K+++++NG LN K ++VG+ + E
Sbjct: 212 GKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVE 271
Query: 192 REKELG---EKAKL-------FTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDGK 241
R+ EL E+ K N+Y+KN + +DE+L++ F P+GTITS +VM G+
Sbjct: 272 RQTELKRTFEQMKQDRITRYQVVNLYVKNLDDGIDDERLRKAFSPFGTITSAKVMMEGGR 331
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRF 292
S+GFGFV + SPE A KAV NG+ V K LYV AQ+K ER L +
Sbjct: 332 SKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAYLTNEY 382
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 122/236 (51%), Gaps = 17/236 (7%)
Query: 102 DPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFET 160
+PS ++++ +L + +Y+ FS G ILS ++ +D S Y +V+F+
Sbjct: 2 NPSTPSYPTASLYVGDLHPDVTEAMLYEKFSPAGPILSIRICRDLITSGSSNYAYVNFQH 61
Query: 161 EEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKL 220
+ A +++ +N ++ K V I +R+ L + N+++KN + N++ L
Sbjct: 62 TKDAEHALDTMNFDVIKGKPV----RIMWSQRDPSLRKSG--VGNIFVKNLDKSINNKAL 115
Query: 221 KEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
+ +G I S V+ ++ S+G+GFV +E+ E AE+A++ NG ++G+ ++VG+ +
Sbjct: 116 YDTVSAFGNILSCNVVCDENGSKGYGFVHFETHEAAERAIKKMNGMLLNGRKVFVGQFKS 175
Query: 281 KAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ ER EL R + N+Y+KN + +DDERL+ F FG S K
Sbjct: 176 RKEREAELGARAKEFP----------NVYIKNFGEDMDDERLKDLFGKFGPALSVK 221
>gi|402901594|ref|XP_003913731.1| PREDICTED: polyadenylate-binding protein 1-like [Papio anubis]
Length = 636
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 182/262 (69%), Positives = 216/262 (82%), Gaps = 2/262 (0%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D E ALDTMNFD +KG+P+RIMWSQRDPSLR+SGVGN+F+KNLDKSI+NK +YDT SAFG
Sbjct: 64 DAEHALDTMNFDVIKGKPVRIMWSQRDPSLRRSGVGNIFVKNLDKSINNKVLYDTVSAFG 123
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCKV DE G SKGYGFVHFET EAA ++IEK+NG LLN + VFVG+F RKERE E
Sbjct: 124 NILSCKVVCDENG-SKGYGFVHFETHEAAERAIEKMNGTLLNDRKVFVGRFKSRKEREAE 182
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPE 254
LG K K F NVYIKNFGED +DE+LK++F +G S +VM ++ GKS+GFGFV++E E
Sbjct: 183 LGAKVKEFPNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHE 242
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A+KAV NGKE++GK +YVGRAQKK ER ELKR+FE +K +R+ RYQ VNLYVKNLD
Sbjct: 243 DAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQVVNLYVKNLD 302
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
D IDDERLRK F+PFGTITSAK
Sbjct: 303 DDIDDERLRKAFSPFGTITSAK 324
Score = 161 bits (407), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 93/234 (39%), Positives = 137/234 (58%), Gaps = 22/234 (9%)
Query: 78 ERALDTMNFDALKGRPIRI--MWSQRDPSLRKSGVG-------NVFIKNLDKSIDNKAMY 128
ERA++ MN L R + + S+++ R++ +G NV+IKN + +D++ +
Sbjct: 152 ERAIEKMNGTLLNDRKVFVGRFKSRKE---REAELGAKVKEFPNVYIKNFGEDMDDERLK 208
Query: 129 DTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIP 188
D F FG LS KV DE G SKG+GFV FE E A K+++++NG LN K ++VG+
Sbjct: 209 DLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQK 268
Query: 189 RKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN 238
+ ER+ EL K + N+Y+KN +D +DE+L++ F P+GTITS +VM
Sbjct: 269 KVERQTELKRKFEQMKQDRITRYQVVNLYVKNLDDDIDDERLRKAFSPFGTITSAKVMME 328
Query: 239 DGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRF 292
G+S+GFGFV + SPE A KAV NG+ V K LYV AQ+K +R L +
Sbjct: 329 GGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEDRQAHLTNEY 382
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 121/236 (51%), Gaps = 17/236 (7%)
Query: 102 DPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFET 160
+PS ++++ +L + +Y+ FS G ILS +V +D S Y +V+F+
Sbjct: 2 NPSTPSYPTASLYVGDLHPDVTEAMLYEKFSRAGPILSIRVCRDVITRRSSSYAYVNFQH 61
Query: 161 EEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKL 220
+ A +++ +N ++ K V + +R+ L N+++KN + N++ L
Sbjct: 62 PKDAEHALDTMNFDVIKGKPVRIM----WSQRDPSLRRSG--VGNIFVKNLDKSINNKVL 115
Query: 221 KEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
+ +G I S +V+ ++ S+G+GFV +E+ E AE+A++ NG ++ + ++VGR +
Sbjct: 116 YDTVSAFGNILSCKVVCDENGSKGYGFVHFETHEAAERAIEKMNGTLLNDRKVFVGRFKS 175
Query: 281 KAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ ER EL + + N+Y+KN + +DDERL+ F FG S K
Sbjct: 176 RKEREAELGAKVKEFP----------NVYIKNFGEDMDDERLKDLFGKFGPALSVK 221
>gi|82802751|gb|ABB92426.1| PABP3 [Pan troglodytes]
Length = 632
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 182/262 (69%), Positives = 217/262 (82%), Gaps = 2/262 (0%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D E ALDTMNFD +KG+P+RIMWSQRDPSLRKSG+GN+F+KNLDKSI+NKA+YDT SAFG
Sbjct: 64 DAEHALDTMNFDVIKGKPLRIMWSQRDPSLRKSGMGNIFVKNLDKSINNKALYDTVSAFG 123
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSC V DE G SKGYGFVHFET EAA ++IEK+NGMLLN + VFVG+F RKERE E
Sbjct: 124 NILSCNVVCDENG-SKGYGFVHFETHEAAERAIEKMNGMLLNGRKVFVGQFKSRKEREAE 182
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPE 254
LG +AK F NVYIKNFGED +DE+LK++F +G S +VM ++ GKS+GFGFV++E E
Sbjct: 183 LGARAKEFPNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHE 242
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A+KAV NGKE++GK +YVGRAQKK ER ELKR FE +K +R+ RYQ VNLYVKNLD
Sbjct: 243 DAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRTFEQMKQDRITRYQVVNLYVKNLD 302
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
D IDDERL+K F+PFGTITSAK
Sbjct: 303 DDIDDERLQKAFSPFGTITSAK 324
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 96/231 (41%), Positives = 135/231 (58%), Gaps = 16/231 (6%)
Query: 78 ERALDTMNFDALKGRPIRI----MWSQRDPSL--RKSGVGNVFIKNLDKSIDNKAMYDTF 131
ERA++ MN L GR + + +R+ L R NV+IKN + +D++ + D F
Sbjct: 152 ERAIEKMNGMLLNGRKVFVGQFKSRKEREAELGARAKEFPNVYIKNFGEDMDDERLKDLF 211
Query: 132 SAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKE 191
FG LS KV DE G SKG+GFV FE E A K+++++NG LN K ++VG+ + E
Sbjct: 212 GKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVE 271
Query: 192 REKELG---EKAKL-------FTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDGK 241
R+ EL E+ K N+Y+KN +D +DE+L++ F P+GTITS +VM G+
Sbjct: 272 RQTELKRTFEQMKQDRITRYQVVNLYVKNLDDDIDDERLQKAFSPFGTITSAKVMMEGGR 331
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRF 292
S+GFGFV + SPE A KAV NG+ V K LYV AQ+K ER L +
Sbjct: 332 SKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAYLTNEY 382
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 125/237 (52%), Gaps = 19/237 (8%)
Query: 102 DPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQD--EQGNSKGYGFVHFE 159
+PS ++++ +L + +Y+ FS G ILS +V +D +G+S Y +V+F+
Sbjct: 2 NPSTPSYPTASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDLITRGSS-NYAYVNFQ 60
Query: 160 TEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEK 219
+ A +++ +N ++ K + I +R+ L + N+++KN + N++
Sbjct: 61 HPKDAEHALDTMNFDVIKGKPL----RIMWSQRDPSLRKSG--MGNIFVKNLDKSINNKA 114
Query: 220 LKEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQ 279
L + +G I S V+ ++ S+G+GFV +E+ E AE+A++ NG ++G+ ++VG+ +
Sbjct: 115 LYDTVSAFGNILSCNVVCDENGSKGYGFVHFETHEAAERAIEKMNGMLLNGRKVFVGQFK 174
Query: 280 KKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ ER EL R + N+Y+KN + +DDERL+ F FG S K
Sbjct: 175 SRKEREAELGARAKEFP----------NVYIKNFGEDMDDERLKDLFGKFGPALSVK 221
>gi|114649018|ref|XP_001154541.1| PREDICTED: polyadenylate-binding protein 3 isoform 5 [Pan
troglodytes]
Length = 633
Score = 378 bits (971), Expect = e-102, Method: Compositional matrix adjust.
Identities = 182/262 (69%), Positives = 217/262 (82%), Gaps = 2/262 (0%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D E ALDTMNFD +KG+P+RIMWSQRDPSLRKSG+GN+F+KNLDKSI+NKA+YDT SAFG
Sbjct: 64 DAEHALDTMNFDVIKGKPLRIMWSQRDPSLRKSGMGNIFVKNLDKSINNKALYDTVSAFG 123
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSC V DE G SKGYGFVHFET EAA ++IEK+NGMLLN + VFVG+F RKERE E
Sbjct: 124 NILSCNVVCDENG-SKGYGFVHFETHEAAERAIEKMNGMLLNGRKVFVGQFKSRKEREAE 182
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPE 254
LG +AK F NVYIKNFGED +DE+LK++F +G S +VM ++ GKS+GFGFV++E E
Sbjct: 183 LGARAKEFPNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHE 242
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A+KAV NGKE++GK +YVGRAQKK ER ELKR FE +K +R+ RYQ VNLYVKNLD
Sbjct: 243 DAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRTFEQMKQDRITRYQVVNLYVKNLD 302
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
D IDDERL+K F+PFGTITSAK
Sbjct: 303 DDIDDERLQKAFSPFGTITSAK 324
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 96/231 (41%), Positives = 135/231 (58%), Gaps = 16/231 (6%)
Query: 78 ERALDTMNFDALKGRPIRI----MWSQRDPSL--RKSGVGNVFIKNLDKSIDNKAMYDTF 131
ERA++ MN L GR + + +R+ L R NV+IKN + +D++ + D F
Sbjct: 152 ERAIEKMNGMLLNGRKVFVGQFKSRKEREAELGARAKEFPNVYIKNFGEDMDDERLKDLF 211
Query: 132 SAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKE 191
FG LS KV DE G SKG+GFV FE E A K+++++NG LN K ++VG+ + E
Sbjct: 212 GKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVE 271
Query: 192 REKELG---EKAKL-------FTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDGK 241
R+ EL E+ K N+Y+KN +D +DE+L++ F P+GTITS +VM G+
Sbjct: 272 RQTELKRTFEQMKQDRITRYQVVNLYVKNLDDDIDDERLQKAFSPFGTITSAKVMMEGGR 331
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRF 292
S+GFGFV + SPE A KAV NG+ V K LYV AQ+K ER L +
Sbjct: 332 SKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAYLTNEY 382
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 125/237 (52%), Gaps = 19/237 (8%)
Query: 102 DPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQD--EQGNSKGYGFVHFE 159
+PS ++++ +L + +Y+ FS G ILS +V +D +G+S Y +V+F+
Sbjct: 2 NPSTPSYPTASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDLITRGSS-NYAYVNFQ 60
Query: 160 TEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEK 219
+ A +++ +N ++ K + I +R+ L + N+++KN + N++
Sbjct: 61 HPKDAEHALDTMNFDVIKGKPL----RIMWSQRDPSLRKSG--MGNIFVKNLDKSINNKA 114
Query: 220 LKEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQ 279
L + +G I S V+ ++ S+G+GFV +E+ E AE+A++ NG ++G+ ++VG+ +
Sbjct: 115 LYDTVSAFGNILSCNVVCDENGSKGYGFVHFETHEAAERAIEKMNGMLLNGRKVFVGQFK 174
Query: 280 KKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ ER EL R + N+Y+KN + +DDERL+ F FG S K
Sbjct: 175 SRKEREAELGARAKEFP----------NVYIKNFGEDMDDERLKDLFGKFGPALSVK 221
>gi|37681851|gb|AAQ97803.1| poly(A)-binding protein, cytoplasmic 1 [Danio rerio]
Length = 620
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 186/275 (67%), Positives = 220/275 (80%), Gaps = 4/275 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G + QP D E ALDTMN++ +KGRPIRIMWSQRDP LRKSGVGN+FIKN+D+SI
Sbjct: 53 GYAYINFQQP--ADAECALDTMNYEVIKGRPIRIMWSQRDPGLRKSGVGNIFIKNMDESI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFSAFG+ILSCKV DE G SKGYGFVHFET+EAAN++IE +NGMLLN + VF
Sbjct: 111 DNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAANRAIETMNGMLLNDRKVF 169
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GK 241
VG F RKERE E+G KA FTNVYIKNFGED + EKLK +F +G S VM ++ G+
Sbjct: 170 VGHFKSRKEREAEMGAKAVEFTNVYIKNFGEDIDSEKLKNIFTEFGKTLSVCVMTDERGR 229
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
SRGFGFV + + A +AV NGKE++G++LYVGRAQK+ ER ELKR+FE +K ER+
Sbjct: 230 SRGFGFVNFVNHGDARRAVTEMNGKELNGRVLYVGRAQKRLERQGELKRKFEQIKQERIQ 289
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLYVKNLDDSIDDE+LRKEF P+GTITSAK
Sbjct: 290 RYQGVNLYVKNLDDSIDDEKLRKEFAPYGTITSAK 324
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 93/238 (39%), Positives = 137/238 (57%), Gaps = 20/238 (8%)
Query: 79 RALDTMNFDALKGRPIRI----MWSQRDPSLRKSGV--GNVFIKNLDKSIDNKAMYDTFS 132
RA++TMN L R + + +R+ + V NV+IKN + ID++ + + F+
Sbjct: 153 RAIETMNGMLLNDRKVFVGHFKSRKEREAEMGAKAVEFTNVYIKNFGEDIDSEKLKNIFT 212
Query: 133 AFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKER 192
FG LS V DE+G S+G+GFV+F A +++ ++NG LN ++++VG+ R ER
Sbjct: 213 EFGKTLSVCVMTDERGRSRGFGFVNFVNHGDARRAVTEMNGKELNGRVLYVGRAQKRLER 272
Query: 193 EKELGEKAKLF----------TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDGKS 242
+ EL K + N+Y+KN + +DEKL++ F PYGTITS +VM + G S
Sbjct: 273 QGELKRKFEQIKQERIQRYQGVNLYVKNLDDSIDDEKLRKEFAPYGTITSAKVMTDGGHS 332
Query: 243 RGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERL 300
RGFGFV + SPE A KAV NG+ V K LYV AQ+K ER L ++ I+RL
Sbjct: 333 RGFGFVCFSSPEEATKAVTEMNGRIVSTKPLYVALAQRKEERKAILTNQY----IQRL 386
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 67/143 (46%), Gaps = 20/143 (13%)
Query: 197 GEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPE 254
G A ++Y+ + D + L + F P G I S RV + +S G+ ++ ++ P
Sbjct: 4 GGPAYPLASLYVGDLHADVTEAMLYQKFSPAGQIMSIRVCRDVITRRSLGYAYINFQQPA 63
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGV-NLYVKNL 313
AE A+ N + + G+ + + +Q+ R GV N+++KN+
Sbjct: 64 DAECALDTMNYEVIKGRPIRIMWSQRDPGL-----------------RKSGVGNIFIKNM 106
Query: 314 DDSIDDERLRKEFTPFGTITSAK 336
D+SID++ L F+ FG I S K
Sbjct: 107 DESIDNKALYDTFSAFGNILSCK 129
>gi|441613453|ref|XP_004088139.1| PREDICTED: polyadenylate-binding protein 1-like [Nomascus
leucogenys]
Length = 638
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 181/262 (69%), Positives = 217/262 (82%), Gaps = 2/262 (0%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D E ALDTMNFD +KG+P+RIMWSQRDPSLRKSGVGN+F+KNLDKSI+NKA+YDT SAFG
Sbjct: 64 DAEHALDTMNFDVIKGKPLRIMWSQRDPSLRKSGVGNIFVKNLDKSINNKALYDTVSAFG 123
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
++LSCKV DE G SKGYGFVHFET EAA ++IEK+NG+ LN + VFVG+F RKERE E
Sbjct: 124 NVLSCKVVCDENG-SKGYGFVHFETREAAERAIEKMNGIPLNDRKVFVGRFKSRKEREAE 182
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGKSRGFGFVAYESPE 254
LG +AK F NVYIKNFGED +DE+LK++F +G S +VM + GKS+GFGFV++E E
Sbjct: 183 LGARAKEFPNVYIKNFGEDMDDERLKDLFGKFGPTLSVKVMTDQSGKSKGFGFVSFEKHE 242
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A+KAV NGKE++GK +YVGRAQKK ER ELK +FE +K +R+ RYQ VNLYVKNLD
Sbjct: 243 DAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKCKFEQMKQDRITRYQVVNLYVKNLD 302
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
D+IDDERLRK F+PFGTITSAK
Sbjct: 303 DAIDDERLRKAFSPFGTITSAK 324
Score = 157 bits (398), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 92/232 (39%), Positives = 132/232 (56%), Gaps = 16/232 (6%)
Query: 77 TERALDTMNFDALKGRPIRI----MWSQRDPSL--RKSGVGNVFIKNLDKSIDNKAMYDT 130
ERA++ MN L R + + +R+ L R NV+IKN + +D++ + D
Sbjct: 151 AERAIEKMNGIPLNDRKVFVGRFKSRKEREAELGARAKEFPNVYIKNFGEDMDDERLKDL 210
Query: 131 FSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRK 190
F FG LS KV D+ G SKG+GFV FE E A K+++++NG LN K ++VG+ +
Sbjct: 211 FGKFGPTLSVKVMTDQSGKSKGFGFVSFEKHEDAQKAVDEMNGKELNGKQIYVGRAQKKV 270
Query: 191 EREKELGEKAKLF----------TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDG 240
ER+ EL K + N+Y+KN + +DE+L++ F P+GTITS +VM G
Sbjct: 271 ERQTELKCKFEQMKQDRITRYQVVNLYVKNLDDAIDDERLRKAFSPFGTITSAKVMMEGG 330
Query: 241 KSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRF 292
+S+GFGFV + SPE A KAV NG+ V K LYV AQ+K ER L +
Sbjct: 331 RSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAYLTNEY 382
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 123/236 (52%), Gaps = 17/236 (7%)
Query: 102 DPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFET 160
+PS ++++ +L + +Y+ FS G ILS +V +D +S Y +V+F+
Sbjct: 2 NPSTPSYPTASLYVGDLHPDVTEAMLYEKFSRAGPILSIRVCRDVITPHSSNYAYVNFQH 61
Query: 161 EEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKL 220
+ A +++ +N ++ K + + +R+ L + N+++KN + N++ L
Sbjct: 62 PKDAEHALDTMNFDVIKGKPLRIM----WSQRDPSLRKSG--VGNIFVKNLDKSINNKAL 115
Query: 221 KEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
+ +G + S +V+ ++ S+G+GFV +E+ E AE+A++ NG ++ + ++VGR +
Sbjct: 116 YDTVSAFGNVLSCKVVCDENGSKGYGFVHFETREAAERAIEKMNGIPLNDRKVFVGRFKS 175
Query: 281 KAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ ER EL R + N+Y+KN + +DDERL+ F FG S K
Sbjct: 176 RKEREAELGARAKEFP----------NVYIKNFGEDMDDERLKDLFGKFGPTLSVK 221
>gi|57997079|emb|CAB66834.2| hypothetical protein [Homo sapiens]
Length = 631
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 182/262 (69%), Positives = 216/262 (82%), Gaps = 2/262 (0%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D E ALDTMNFD +KG+P+RIMWSQRDPSLRKSGVGN+F+KNLDKSI+NKA+YDT SAFG
Sbjct: 64 DAEHALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFVKNLDKSINNKALYDTVSAFG 123
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSC V DE G SKGYGFVHFET EAA ++I+K+NGMLLN + VFVG+F RKERE E
Sbjct: 124 NILSCNVVCDENG-SKGYGFVHFETHEAAERAIKKMNGMLLNGRKVFVGQFKSRKEREAE 182
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPE 254
LG +AK F NVYIKNFGED +DE+LK++F +G S +M ++ GKS+GFGFV++E E
Sbjct: 183 LGARAKEFPNVYIKNFGEDMDDERLKDLFGKFGPALSVELMTDESGKSKGFGFVSFERHE 242
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A+KAV NGKE++GK +YVGRAQKK ER ELKR FE +K +R+ RYQ VNLYVKNLD
Sbjct: 243 DAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRTFEQMKQDRITRYQVVNLYVKNLD 302
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
D IDDERLRK F+PFGTITSAK
Sbjct: 303 DGIDDERLRKAFSPFGTITSAK 324
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 93/231 (40%), Positives = 133/231 (57%), Gaps = 16/231 (6%)
Query: 78 ERALDTMNFDALKGRPIRI----MWSQRDPSL--RKSGVGNVFIKNLDKSIDNKAMYDTF 131
ERA+ MN L GR + + +R+ L R NV+IKN + +D++ + D F
Sbjct: 152 ERAIKKMNGMLLNGRKVFVGQFKSRKEREAELGARAKEFPNVYIKNFGEDMDDERLKDLF 211
Query: 132 SAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKE 191
FG LS ++ DE G SKG+GFV FE E A K+++++NG LN K ++VG+ + E
Sbjct: 212 GKFGPALSVELMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVE 271
Query: 192 REKELG---EKAKL-------FTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDGK 241
R+ EL E+ K N+Y+KN + +DE+L++ F P+GTITS +VM G+
Sbjct: 272 RQTELKRTFEQMKQDRITRYQVVNLYVKNLDDGIDDERLRKAFSPFGTITSAKVMMEGGR 331
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRF 292
S+GFGFV + SPE A KAV NG+ V K LYV AQ+K ER L +
Sbjct: 332 SKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAYLTNEY 382
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 121/234 (51%), Gaps = 17/234 (7%)
Query: 102 DPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFET 160
+PS ++++ +L + +Y+ FS G ILS ++ +D S Y +V+F+
Sbjct: 2 NPSTPSYPTASLYVGDLHPDVTEAMLYEKFSPAGPILSIRICRDLITSGSSNYAYVNFQH 61
Query: 161 EEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKL 220
+ A +++ +N ++ K V I +R+ L + N+++KN + N++ L
Sbjct: 62 TKDAEHALDTMNFDVIKGKPV----RIMWSQRDPSLRKSG--VGNIFVKNLDKSINNKAL 115
Query: 221 KEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
+ +G I S V+ ++ S+G+GFV +E+ E AE+A++ NG ++G+ ++VG+ +
Sbjct: 116 YDTVSAFGNILSCNVVCDENGSKGYGFVHFETHEAAERAIKKMNGMLLNGRKVFVGQFKS 175
Query: 281 KAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITS 334
+ ER EL R + N+Y+KN + +DDERL+ F FG S
Sbjct: 176 RKEREAELGARAKEFP----------NVYIKNFGEDMDDERLKDLFGKFGPALS 219
>gi|41054151|ref|NP_956133.1| polyadenylate-binding protein 1-like [Danio rerio]
gi|27881953|gb|AAH44513.1| Zgc:55855 [Danio rerio]
gi|182890236|gb|AAI65470.1| Zgc:55855 protein [Danio rerio]
Length = 620
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 186/275 (67%), Positives = 220/275 (80%), Gaps = 4/275 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G + QP D E ALDTMN++ +KGRPIRIMWSQRDP LRKSGVGN+FIKN+D+SI
Sbjct: 53 GYAYINFQQP--ADAECALDTMNYEVIKGRPIRIMWSQRDPGLRKSGVGNIFIKNMDESI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFSAFG+ILSCKV DE G SKGYGFVHFET+EAAN++IE +NGMLLN + VF
Sbjct: 111 DNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAANRAIETMNGMLLNDRKVF 169
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GK 241
VG F RKERE E+G KA FTNVYIKNFGED + EKLK +F +G S VM ++ G+
Sbjct: 170 VGHFKSRKEREAEMGAKAVEFTNVYIKNFGEDIDSEKLKNIFTEFGKTLSVCVMTDERGR 229
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
SRGFGFV + + A +AV NGKE++G++LYVGRAQK+ ER ELKR+FE +K ER+
Sbjct: 230 SRGFGFVNFVNHGDARRAVTEMNGKELNGRVLYVGRAQKRLERQGELKRKFEQIKQERIQ 289
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLYVKNLDDSIDDE+LRKEF P+GTITSAK
Sbjct: 290 RYQGVNLYVKNLDDSIDDEKLRKEFAPYGTITSAK 324
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 93/238 (39%), Positives = 137/238 (57%), Gaps = 20/238 (8%)
Query: 79 RALDTMNFDALKGRPIRI----MWSQRDPSLRKSGV--GNVFIKNLDKSIDNKAMYDTFS 132
RA++TMN L R + + +R+ + V NV+IKN + ID++ + + F+
Sbjct: 153 RAIETMNGMLLNDRKVFVGHFKSRKEREAEMGAKAVEFTNVYIKNFGEDIDSEKLKNIFT 212
Query: 133 AFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKER 192
FG LS V DE+G S+G+GFV+F A +++ ++NG LN ++++VG+ R ER
Sbjct: 213 EFGKTLSVCVMTDERGRSRGFGFVNFVNHGDARRAVTEMNGKELNGRVLYVGRAQKRLER 272
Query: 193 EKELGEKAKLF----------TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDGKS 242
+ EL K + N+Y+KN + +DEKL++ F PYGTITS +VM + G S
Sbjct: 273 QGELKRKFEQIKQERIQRYQGVNLYVKNLDDSIDDEKLRKEFAPYGTITSAKVMTDGGHS 332
Query: 243 RGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERL 300
RGFGFV + SPE A KAV NG+ V K LYV AQ+K ER L ++ I+RL
Sbjct: 333 RGFGFVCFSSPEEATKAVTEMNGRIVSTKPLYVALAQRKEERKAILTNQY----IQRL 386
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 67/143 (46%), Gaps = 20/143 (13%)
Query: 197 GEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPE 254
G A ++Y+ + D + L + F P G I S RV + +S G+ ++ ++ P
Sbjct: 4 GGPAYPLASLYVGDLHADVTEAMLYQKFSPAGQIMSIRVCRDVITRRSLGYAYINFQQPA 63
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGV-NLYVKNL 313
AE A+ N + + G+ + + +Q+ R GV N+++KN+
Sbjct: 64 DAECALDTMNYEVIKGRPIRIMWSQRDPGL-----------------RKSGVGNIFIKNM 106
Query: 314 DDSIDDERLRKEFTPFGTITSAK 336
D+SID++ L F+ FG I S K
Sbjct: 107 DESIDNKALYDTFSAFGNILSCK 129
>gi|405970795|gb|EKC35670.1| Polyadenylate-binding protein 1 [Crassostrea gigas]
Length = 462
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 191/270 (70%), Positives = 220/270 (81%), Gaps = 5/270 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD +KGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI
Sbjct: 58 GYAYVNFQQP--ADAERALDTMNFDTIKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 115
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFSAFG+ILSCK+ DE G S+GYGFVHFETEEAA +IEKVNGMLLN K VF
Sbjct: 116 DNKALYDTFSAFGNILSCKIVCDEHG-SRGYGFVHFETEEAARIAIEKVNGMLLNGKKVF 174
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDGKS 242
VG+F+ R+ER + LG+K + F NVY+KNF E+ NDE L++MFEPYG I S +VM +DG
Sbjct: 175 VGRFMSRRERLEVLGDKMRKFNNVYVKNFSEEINDETLRDMFEPYGKIISAKVMTDDGSG 234
Query: 243 RGFGF--VAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERL 300
+G GF V++E PE AEKAV+A NG + GKILYVGRAQKK ER ELK +FE +++ER+
Sbjct: 235 KGKGFGFVSFEDPEAAEKAVEALNGNDNSGKILYVGRAQKKIERQAELKEKFERIRMERI 294
Query: 301 NRYQGVNLYVKNLDDSIDDERLRKEFTPFG 330
NRYQGVNLYVKNLDD+IDDERLRKEF FG
Sbjct: 295 NRYQGVNLYVKNLDDNIDDERLRKEFAQFG 324
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 125/236 (52%), Gaps = 17/236 (7%)
Query: 102 DPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFET 160
+P+ + ++++ +L + +++ FS G +L +V +D S GY +V+F+
Sbjct: 7 NPAGPSYPMASLYVGDLHPDVTEAMLFEKFSTAGPVLPIRVCRDMITRRSLGYAYVNFQQ 66
Query: 161 EEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKL 220
A ++++ +N + + + I +R+ L + NV+IKN + +++ L
Sbjct: 67 PADAERALDTMNFDTIKGRPIR----IMWSQRDPSLRKSG--VGNVFIKNLDKSIDNKAL 120
Query: 221 KEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
+ F +G I S +++ ++ SRG+GFV +E+ E A A++ NG ++GK ++VGR
Sbjct: 121 YDTFSAFGNILSCKIVCDEHGSRGYGFVHFETEEAARIAIEKVNGMLLNGKKVFVGRFMS 180
Query: 281 KAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ ER + L K+ + N N+YVKN + I+DE LR F P+G I SAK
Sbjct: 181 RRERLEVLGD-----KMRKFN-----NVYVKNFSEEINDETLRDMFEPYGKIISAK 226
>gi|82802757|gb|ABB92429.1| PABP3 [Hylobates lar]
Length = 635
Score = 376 bits (966), Expect = e-102, Method: Compositional matrix adjust.
Identities = 181/262 (69%), Positives = 216/262 (82%), Gaps = 2/262 (0%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D E ALDTMNFD +KG+P+RIMWSQRDPSLRKSGVGN+F+KNLDKSI+NKA+YDT SAFG
Sbjct: 64 DAEHALDTMNFDVIKGKPLRIMWSQRDPSLRKSGVGNIFVKNLDKSINNKALYDTVSAFG 123
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
++LSCKV DE G SKGYGFVHF T EAA ++IEK+NG+ LN VFVG+F RKERE E
Sbjct: 124 NVLSCKVVCDENG-SKGYGFVHFGTREAAERAIEKMNGIPLNDCKVFVGRFKSRKEREAE 182
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGKSRGFGFVAYESPE 254
LG +AK F NVYIKNFGED +DE+LK++F +G S +VM + GKS+GFGFV++E E
Sbjct: 183 LGARAKEFPNVYIKNFGEDMDDERLKDLFGKFGPTLSVKVMTDQSGKSKGFGFVSFEKHE 242
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A+KAV NGKE++GK +YVGRAQKK ER ELKR+FE +K +R+ RYQ VNLYVKNLD
Sbjct: 243 DAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQVVNLYVKNLD 302
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
D+IDDERLRK F+PFGTITSAK
Sbjct: 303 DAIDDERLRKAFSPFGTITSAK 324
Score = 154 bits (390), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 81/191 (42%), Positives = 116/191 (60%), Gaps = 10/191 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV+IKN + +D++ + D F FG LS KV D+ G SKG+GFV FE E A K+++++
Sbjct: 192 NVYIKNFGEDMDDERLKDLFGKFGPTLSVKVMTDQSGKSKGFGFVSFEKHEDAQKAVDEM 251
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKLK 221
NG LN K ++VG+ + ER+ EL K + N+Y+KN + +DE+L+
Sbjct: 252 NGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQVVNLYVKNLDDAIDDERLR 311
Query: 222 EMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKK 281
+ F P+GTITS +VM G+S+GFGFV + SPE A KAV NG+ V + LYV AQ+K
Sbjct: 312 KAFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATEPLYVALAQRK 371
Query: 282 AERTQELKRRF 292
ER L +
Sbjct: 372 EERQAYLTNEY 382
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 120/236 (50%), Gaps = 17/236 (7%)
Query: 102 DPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFET 160
+PS ++++ +L + +Y+ FS G ILS +V +D S Y +V+F+
Sbjct: 2 NPSTPSYPTASLYVGDLHPDVTEAMLYEKFSRAGPILSIRVCRDVITRRSSNYAYVNFQH 61
Query: 161 EEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKL 220
+ A +++ +N ++ K + + +R+ L + N+++KN + N++ L
Sbjct: 62 PKDAEHALDTMNFDVIKGKPLRIM----WSQRDPSLRKSG--VGNIFVKNLDKSINNKAL 115
Query: 221 KEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
+ +G + S +V+ ++ S+G+GFV + + E AE+A++ NG ++ ++VGR +
Sbjct: 116 YDTVSAFGNVLSCKVVCDENGSKGYGFVHFGTREAAERAIEKMNGIPLNDCKVFVGRFKS 175
Query: 281 KAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ ER EL R + N+Y+KN + +DDERL+ F FG S K
Sbjct: 176 RKEREAELGARAKEFP----------NVYIKNFGEDMDDERLKDLFGKFGPTLSVK 221
>gi|334312764|ref|XP_003339775.1| PREDICTED: LOW QUALITY PROTEIN: polyadenylate-binding protein
1-like [Monodelphis domestica]
Length = 614
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 182/275 (66%), Positives = 219/275 (79%), Gaps = 4/275 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G + QP D ERALDTMNF+ +KGRPIRIMWSQRDP LRKSG+GN+FIKNLD SI
Sbjct: 53 GYAYINFQQP--ADAERALDTMNFEVIKGRPIRIMWSQRDPGLRKSGIGNIFIKNLDDSI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFS FG+ILSCKV DE G S+G+GFVHFET EAAN++I +NGMLLN + VF
Sbjct: 111 DNKALYDTFSTFGNILSCKVVCDENG-SRGFGFVHFETHEAANQAINTMNGMLLNDRKVF 169
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGK 241
VG F R+ERE ELG +A FTN+Y+KNF D +DE L+E+F +G S +VM + +G+
Sbjct: 170 VGHFKSRQEREAELGARALEFTNIYVKNFEGDMDDECLQELFSQFGKTLSVKVMVDENGQ 229
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
SRGFGFV +E E A+KAV NGKE+ G++LYVGRAQK++ER ELKRRFE +K ER+N
Sbjct: 230 SRGFGFVNFEKHEEAQKAVSNMNGKELGGRVLYVGRAQKRSERQSELKRRFEQMKQERVN 289
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLYVKNLDD IDDE+LRKEF+P+G ITSAK
Sbjct: 290 RYQGVNLYVKNLDDIIDDEKLRKEFSPYGVITSAK 324
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 92/245 (37%), Positives = 140/245 (57%), Gaps = 20/245 (8%)
Query: 79 RALDTMNFDALKGRPIRI----MWSQRDPSL--RKSGVGNVFIKNLDKSIDNKAMYDTFS 132
+A++TMN L R + + +R+ L R N+++KN + +D++ + + FS
Sbjct: 153 QAINTMNGMLLNDRKVFVGHFKSRQEREAELGARALEFTNIYVKNFEGDMDDECLQELFS 212
Query: 133 AFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKER 192
FG LS KV DE G S+G+GFV+FE E A K++ +NG L ++++VG+ R ER
Sbjct: 213 QFGKTLSVKVMVDENGQSRGFGFVNFEKHEEAQKAVSNMNGKELGGRVLYVGRAQKRSER 272
Query: 193 EKELGEKAKLF----------TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDGKS 242
+ EL + + N+Y+KN + +DEKL++ F PYG ITS +VM G S
Sbjct: 273 QSELKRRFEQMKQERVNRYQGVNLYVKNLDDIIDDEKLRKEFSPYGVITSAKVMTEGGHS 332
Query: 243 RGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNR 302
+GFGFV + SPE A KAV NG+ V K LYV AQ+K ER L ++ ++RL+
Sbjct: 333 KGFGFVCFSSPEEATKAVTEMNGRIVSTKPLYVALAQRKEERKAILTSQY----MQRLST 388
Query: 303 YQGVN 307
+G+N
Sbjct: 389 LRGLN 393
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 121/228 (53%), Gaps = 17/228 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQD-EQGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + +Y+ FSA G I+S +V +D S GY +++F+ A +++
Sbjct: 10 LASLYVGDLHPDVTEAMLYEKFSAAGPIMSIRVCRDVATRRSLGYAYINFQQPADAERAL 69
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N ++ G+ I +++ G + N++IKN + +++ L + F +G
Sbjct: 70 DTMNFEVIK------GRPIRIMWSQRDPGLRKSGIGNIFIKNLDDSIDNKALYDTFSTFG 123
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S +V+ ++ SRGFGFV +E+ E A +A+ NG ++ + ++VG + + ER EL
Sbjct: 124 NILSCKVVCDENGSRGFGFVHFETHEAANQAINTMNGMLLNDRKVFVGHFKSRQEREAEL 183
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
R + N+YVKN + +DDE L++ F+ FG S K
Sbjct: 184 GAR----------ALEFTNIYVKNFEGDMDDECLQELFSQFGKTLSVK 221
>gi|82802753|gb|ABB92427.1| PABP3 [Gorilla gorilla]
Length = 630
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 182/262 (69%), Positives = 215/262 (82%), Gaps = 2/262 (0%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D E AL TMNFD +KG+P+RIMWSQRDPSLRK GVGN+F+KNLDKSI+NKA+YDT SAFG
Sbjct: 64 DAEHALHTMNFDVIKGKPLRIMWSQRDPSLRKRGVGNIFVKNLDKSINNKALYDTVSAFG 123
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCKV DE G SKGYGFVHFET EAA ++IEK+NGMLLN + VFVG+F RKERE E
Sbjct: 124 NILSCKVVCDENG-SKGYGFVHFETHEAAERAIEKMNGMLLNDRKVFVGQFKSRKEREAE 182
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPE 254
LG +AK F NVYIKNFGED +DE+LK++F +G S +VM ++ GKS+GFGFV++E E
Sbjct: 183 LGARAKEFPNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHE 242
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A+KAV NGKE++GK +YVGRAQKK ER ELKR FE +K +R+ RYQ VNLYVKNLD
Sbjct: 243 DAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRTFEQMKQDRITRYQVVNLYVKNLD 302
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
D IDDERL K F+PFGTITSAK
Sbjct: 303 DGIDDERLWKAFSPFGTITSAK 324
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 94/231 (40%), Positives = 132/231 (57%), Gaps = 16/231 (6%)
Query: 78 ERALDTMNFDALKGRPIRI----MWSQRDPSL--RKSGVGNVFIKNLDKSIDNKAMYDTF 131
ERA++ MN L R + + +R+ L R NV+IKN + +D++ + D F
Sbjct: 152 ERAIEKMNGMLLNDRKVFVGQFKSRKEREAELGARAKEFPNVYIKNFGEDMDDERLKDLF 211
Query: 132 SAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKE 191
FG LS KV DE G SKG+GFV FE E A K+++++NG LN K ++VG+ + E
Sbjct: 212 GKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVE 271
Query: 192 REKELG---EKAKL-------FTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDGK 241
R+ EL E+ K N+Y+KN + +DE+L + F P+GTITS +VM G+
Sbjct: 272 RQTELKRTFEQMKQDRITRYQVVNLYVKNLDDGIDDERLWKAFSPFGTITSAKVMMEGGR 331
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRF 292
S+GFGFV + SPE A KAV NG+ V K LYV AQ+K ER L +
Sbjct: 332 SKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAYLTNEY 382
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 125/237 (52%), Gaps = 19/237 (8%)
Query: 102 DPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQD--EQGNSKGYGFVHFE 159
+PS ++++ +L + +Y+ FS G ILS +V +D +G+S Y +V+F+
Sbjct: 2 NPSTPSYPTASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDLITRGSS-NYAYVNFQ 60
Query: 160 TEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEK 219
+ A ++ +N ++ K + I +R+ L ++ N+++KN + N++
Sbjct: 61 HPKDAEHALHTMNFDVIKGKPL----RIMWSQRDPSLRKRG--VGNIFVKNLDKSINNKA 114
Query: 220 LKEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQ 279
L + +G I S +V+ ++ S+G+GFV +E+ E AE+A++ NG ++ + ++VG+ +
Sbjct: 115 LYDTVSAFGNILSCKVVCDENGSKGYGFVHFETHEAAERAIEKMNGMLLNDRKVFVGQFK 174
Query: 280 KKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ ER EL R + N+Y+KN + +DDERL+ F FG S K
Sbjct: 175 SRKEREAELGARAKEFP----------NVYIKNFGEDMDDERLKDLFGKFGPALSVK 221
>gi|449281934|gb|EMC88877.1| Embryonic polyadenylate-binding protein [Columba livia]
Length = 646
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 187/291 (64%), Positives = 224/291 (76%), Gaps = 20/291 (6%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G + QP +D ERALDTMNF+ +KGRPIRIMWSQRDP LRKSGVGNVFIKNLD SI
Sbjct: 53 GYAYINFQQP--VDAERALDTMNFEVIKGRPIRIMWSQRDPGLRKSGVGNVFIKNLDDSI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFSAFG+ILSCKV DE G S+GYGFVHFET EAA ++IE +NGMLLN + VF
Sbjct: 111 DNKALYDTFSAFGNILSCKVVCDENG-SRGYGFVHFETHEAATRAIETMNGMLLNDRKVF 169
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRV-MNNDGK 241
VG F RKERE E G KA FTNVYIKNFG+D +D++L+E+F +G S +V M++ G+
Sbjct: 170 VGHFKSRKEREAEFGAKAMEFTNVYIKNFGDDMDDDRLREIFSKFGKTLSVKVMMDSTGR 229
Query: 242 SRGFGFVAYESPEFAEK----------------AVQAWNGKEVDGKILYVGRAQKKAERT 285
S+GFGFV +E E A+K AV NGKE++G+I+YVGRAQK+ ER
Sbjct: 230 SKGFGFVNFEKHEEAQKARGSSCCAQRPPLRWQAVADMNGKEINGRIVYVGRAQKRLERQ 289
Query: 286 QELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
ELKR+FE +K ER++RYQGVNLYVKNLDD IDD+RLRKEF+P+GTITSAK
Sbjct: 290 SELKRKFEQIKQERVSRYQGVNLYVKNLDDGIDDDRLRKEFSPYGTITSAK 340
Score = 147 bits (371), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 87/223 (39%), Positives = 120/223 (53%), Gaps = 27/223 (12%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKS---- 167
NV+IKN +D+ + + FS FG LS KV D G SKG+GFV+FE E A K+
Sbjct: 192 NVYIKNFGDDMDDDRLREIFSKFGKTLSVKVMMDSTGRSKGFGFVNFEKHEEAQKARGSS 251
Query: 168 ------------IEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLF----------TN 205
+ +NG +N +IV+VG+ R ER+ EL K + N
Sbjct: 252 CCAQRPPLRWQAVADMNGKEINGRIVYVGRAQKRLERQSELKRKFEQIKQERVSRYQGVN 311
Query: 206 VYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNG 265
+Y+KN + +D++L++ F PYGTITS +VM G S+GFGFV + SPE A KAV NG
Sbjct: 312 LYVKNLDDGIDDDRLRKEFSPYGTITSAKVMTEGGHSKGFGFVCFSSPEEATKAVTEMNG 371
Query: 266 KEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNL 308
+ V K LYV AQ+K ER L ++ M ++ L G L
Sbjct: 372 RIVSTKPLYVALAQRKEERKAILTNQY-MQRLATLRALPGPLL 413
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 66/137 (48%), Gaps = 20/137 (14%)
Query: 203 FTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDG--KSRGFGFVAYESPEFAEKAV 260
++Y+ + D + L E F P G I S RV + +S G+ ++ ++ P AE+A+
Sbjct: 10 LASLYVGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDVATRRSLGYAYINFQQPVDAERAL 69
Query: 261 QAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGV-NLYVKNLDDSIDD 319
N + + G+ + + +Q+ R GV N+++KNLDDSID+
Sbjct: 70 DTMNFEVIKGRPIRIMWSQRDPGL-----------------RKSGVGNVFIKNLDDSIDN 112
Query: 320 ERLRKEFTPFGTITSAK 336
+ L F+ FG I S K
Sbjct: 113 KALYDTFSAFGNILSCK 129
>gi|426374960|ref|XP_004054321.1| PREDICTED: polyadenylate-binding protein 3 [Gorilla gorilla
gorilla]
Length = 631
Score = 375 bits (963), Expect = e-101, Method: Compositional matrix adjust.
Identities = 182/262 (69%), Positives = 215/262 (82%), Gaps = 2/262 (0%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D E AL TMNFD +KG+P+RIMWSQRDPSLRK GVGN+F+KNLDKSI+NKA+YDT SAFG
Sbjct: 64 DAEHALHTMNFDVIKGKPLRIMWSQRDPSLRKRGVGNIFVKNLDKSINNKALYDTVSAFG 123
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCKV DE G SKGYGFVHFET EAA ++IEK+NGMLLN + VFVG+F RKERE E
Sbjct: 124 NILSCKVVCDENG-SKGYGFVHFETHEAAERAIEKMNGMLLNDRKVFVGQFKSRKEREAE 182
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPE 254
LG +AK F NVYIKNFGED +DE+LK++F +G S +VM ++ GKS+GFGFV++E E
Sbjct: 183 LGARAKEFPNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHE 242
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A+KAV NGKE++GK +YVGRAQKK ER ELKR FE +K +R+ RYQ VNLYVKNLD
Sbjct: 243 DAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRTFEQMKQDRITRYQVVNLYVKNLD 302
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
D IDDERL K F+PFGTITSAK
Sbjct: 303 DGIDDERLWKAFSPFGTITSAK 324
Score = 155 bits (392), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 94/231 (40%), Positives = 132/231 (57%), Gaps = 16/231 (6%)
Query: 78 ERALDTMNFDALKGRPIRI----MWSQRDPSL--RKSGVGNVFIKNLDKSIDNKAMYDTF 131
ERA++ MN L R + + +R+ L R NV+IKN + +D++ + D F
Sbjct: 152 ERAIEKMNGMLLNDRKVFVGQFKSRKEREAELGARAKEFPNVYIKNFGEDMDDERLKDLF 211
Query: 132 SAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKE 191
FG LS KV DE G SKG+GFV FE E A K+++++NG LN K ++VG+ + E
Sbjct: 212 GKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVE 271
Query: 192 REKELG---EKAKL-------FTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDGK 241
R+ EL E+ K N+Y+KN + +DE+L + F P+GTITS +VM G+
Sbjct: 272 RQTELKRTFEQMKQDRITRYQVVNLYVKNLDDGIDDERLWKAFSPFGTITSAKVMMEGGR 331
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRF 292
S+GFGFV + SPE A KAV NG+ V K LYV AQ+K ER L +
Sbjct: 332 SKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAYLTNEY 382
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 125/237 (52%), Gaps = 19/237 (8%)
Query: 102 DPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQD--EQGNSKGYGFVHFE 159
+PS ++++ +L + +Y+ FS G ILS +V +D +G+S Y +V+F+
Sbjct: 2 NPSTPSYPTASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDLITRGSS-NYAYVNFQ 60
Query: 160 TEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEK 219
+ A ++ +N ++ K + I +R+ L ++ N+++KN + N++
Sbjct: 61 HPKDAEHALHTMNFDVIKGKPL----RIMWSQRDPSLRKRG--VGNIFVKNLDKSINNKA 114
Query: 220 LKEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQ 279
L + +G I S +V+ ++ S+G+GFV +E+ E AE+A++ NG ++ + ++VG+ +
Sbjct: 115 LYDTVSAFGNILSCKVVCDENGSKGYGFVHFETHEAAERAIEKMNGMLLNDRKVFVGQFK 174
Query: 280 KKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ ER EL R + N+Y+KN + +DDERL+ F FG S K
Sbjct: 175 SRKEREAELGARAKEFP----------NVYIKNFGEDMDDERLKDLFGKFGPALSVK 221
>gi|126342328|ref|XP_001373103.1| PREDICTED: polyadenylate-binding protein 1-like [Monodelphis
domestica]
Length = 942
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 181/264 (68%), Positives = 219/264 (82%), Gaps = 2/264 (0%)
Query: 74 MLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSA 133
+ D ER L+TMN D +KG+P+RIMWSQRDPSLRKSGVGN+FIKNL+KSIDNKA+Y TFSA
Sbjct: 367 LADAERVLETMNLDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLEKSIDNKALYKTFSA 426
Query: 134 FGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKERE 193
FG+ILSCKV DE G SKGYGFVHFE ++AA+K+IEK+NG+ LN+ V+VG+F RKERE
Sbjct: 427 FGNILSCKVISDENG-SKGYGFVHFENQQAADKAIEKMNGVRLNNLKVYVGRFKSRKERE 485
Query: 194 KELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GKSRGFGFVAYES 252
ELG +A+ FTNVYIKNFGED ++++L E+F +G S +VM ++ GKS+GFGFV+YE
Sbjct: 486 LELGARAREFTNVYIKNFGEDMDNDRLTEVFGKFGHALSVKVMTDESGKSKGFGFVSYEK 545
Query: 253 PEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKN 312
E A++AV NGKE +GK +YVGRAQKK ER ELKR FE +K ER +RYQGVNLYVKN
Sbjct: 546 HEDAQRAVDEMNGKEFNGKRIYVGRAQKKGERQTELKRHFEQVKQERSSRYQGVNLYVKN 605
Query: 313 LDDSIDDERLRKEFTPFGTITSAK 336
LDDSIDDERLRK F+PFGTITSAK
Sbjct: 606 LDDSIDDERLRKAFSPFGTITSAK 629
Score = 155 bits (391), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 82/206 (39%), Positives = 124/206 (60%), Gaps = 14/206 (6%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV+IKN + +DN + + F FG LS KV DE G SKG+GFV +E E A ++++++
Sbjct: 497 NVYIKNFGEDMDNDRLTEVFGKFGHALSVKVMTDESGKSKGFGFVSYEKHEDAQRAVDEM 556
Query: 172 NGMLLNSKIVFVGKFIPRKEREKEL--------GEKAKLF--TNVYIKNFGEDFNDEKLK 221
NG N K ++VG+ + ER+ EL E++ + N+Y+KN + +DE+L+
Sbjct: 557 NGKEFNGKRIYVGRAQKKGERQTELKRHFEQVKQERSSRYQGVNLYVKNLDDSIDDERLR 616
Query: 222 EMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKK 281
+ F P+GTITS +VM G SRGFGFV + +PE A KAV NGK V K LYV AQ+K
Sbjct: 617 KAFSPFGTITSAKVMMEGGHSRGFGFVCFSAPEEAAKAVSEMNGKLVATKPLYVALAQRK 676
Query: 282 AERTQELKRRFEMLKIERLNRYQGVN 307
+R L ++ ++R+ +Q ++
Sbjct: 677 RDRQVHLTNQY----MQRMASFQAMS 698
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 120/228 (52%), Gaps = 17/228 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + +Y+ FS G ILS +V +D S GY +V+F+ A + +
Sbjct: 315 MASLYVGDLHHDVTEAMLYEKFSPAGPILSIRVCRDMLTRRSLGYAYVNFQQLADAERVL 374
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
E +N ++ K V I +R+ L + N++IKN + +++ L + F +G
Sbjct: 375 ETMNLDVIKGKPV----RIMWSQRDPSLRKSG--VGNIFIKNLEKSIDNKALYKTFSAFG 428
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S +V++++ S+G+GFV +E+ + A+KA++ NG ++ +YVGR + + ER EL
Sbjct: 429 NILSCKVISDENGSKGYGFVHFENQQAADKAIEKMNGVRLNNLKVYVGRFKSRKERELEL 488
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
R N+Y+KN + +D++RL + F FG S K
Sbjct: 489 GARAREF----------TNVYIKNFGEDMDNDRLTEVFGKFGHALSVK 526
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 66/143 (46%), Gaps = 20/143 (13%)
Query: 197 GEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPE 254
G A ++Y+ + D + L E F P G I S RV + +S G+ +V ++
Sbjct: 309 GATAIPMASLYVGDLHHDVTEAMLYEKFSPAGPILSIRVCRDMLTRRSLGYAYVNFQQLA 368
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGV-NLYVKNL 313
AE+ ++ N + GK + + +Q+ R GV N+++KNL
Sbjct: 369 DAERVLETMNLDVIKGKPVRIMWSQRDPSL-----------------RKSGVGNIFIKNL 411
Query: 314 DDSIDDERLRKEFTPFGTITSAK 336
+ SID++ L K F+ FG I S K
Sbjct: 412 EKSIDNKALYKTFSAFGNILSCK 434
>gi|226358689|gb|ACO51197.1| poly A binding protein, cytoplasmic 1 a [Hypophthalmichthys
nobilis]
Length = 290
Score = 373 bits (958), Expect = e-101, Method: Compositional matrix adjust.
Identities = 183/252 (72%), Positives = 213/252 (84%), Gaps = 2/252 (0%)
Query: 86 FDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQD 145
F +KGRP+RIMWSQRDPSLRKSGVGN+FIKNLDKSIDNKA+YDTFSAFG+ILSCKV D
Sbjct: 1 FFVIKGRPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCD 60
Query: 146 EQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTN 205
E G SKGYGFVHFET EAA ++IEK+NGMLLN + VFVG+F RKER E+G +AK FTN
Sbjct: 61 ENG-SKGYGFVHFETHEAAERAIEKMNGMLLNDRKVFVGRFKSRKERGAEMGARAKEFTN 119
Query: 206 VYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWN 264
VYIKNFGED +DEKLKE+F YG S RVM ++ GKS+GFGFV++E E A++AV N
Sbjct: 120 VYIKNFGEDMDDEKLKEIFSKYGPALSIRVMTDESGKSKGFGFVSFERHEDAQRAVDEMN 179
Query: 265 GKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRK 324
GKE++GK +YVGRAQKK ER ELKR+FE +K +R+ RYQGVNLYVKNLDD +DDERLRK
Sbjct: 180 GKEMNGKQVYVGRAQKKGERQTELKRKFEQMKQDRMTRYQGVNLYVKNLDDGLDDERLRK 239
Query: 325 EFTPFGTITSAK 336
EF+PFGTITSAK
Sbjct: 240 EFSPFGTITSAK 251
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 81/213 (38%), Positives = 122/213 (57%), Gaps = 16/213 (7%)
Query: 77 TERALDTMNFDALKGRPIRI----MWSQRDPSL--RKSGVGNVFIKNLDKSIDNKAMYDT 130
ERA++ MN L R + + +R + R NV+IKN + +D++ + +
Sbjct: 78 AERAIEKMNGMLLNDRKVFVGRFKSRKERGAEMGARAKEFTNVYIKNFGEDMDDEKLKEI 137
Query: 131 FSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRK 190
FS +G LS +V DE G SKG+GFV FE E A ++++++NG +N K V+VG+ +
Sbjct: 138 FSKYGPALSIRVMTDESGKSKGFGFVSFERHEDAQRAVDEMNGKEMNGKQVYVGRAQKKG 197
Query: 191 EREKELGEKAKLF----------TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDG 240
ER+ EL K + N+Y+KN + +DE+L++ F P+GTITS +VM G
Sbjct: 198 ERQTELKRKFEQMKQDRMTRYQGVNLYVKNLDDGLDDERLRKEFSPFGTITSAKVMMEGG 257
Query: 241 KSRGFGFVAYESPEFAEKAVQAWNGKEVDGKIL 273
+S+GFGFV + SPE A KAV NG+ V K L
Sbjct: 258 RSKGFGFVCFSSPEEATKAVTEMNGRIVATKPL 290
>gi|395829049|ref|XP_003787673.1| PREDICTED: polyadenylate-binding protein 1-like [Otolemur
garnettii]
Length = 611
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 179/275 (65%), Positives = 217/275 (78%), Gaps = 4/275 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G + QP D ERALDTMNF+ +KG+PIRIMWSQRDP LRKSGVGN+FIKNL+ SI
Sbjct: 53 GYAYINFQQP--ADAERALDTMNFEMIKGQPIRIMWSQRDPGLRKSGVGNIFIKNLEASI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFS FG+ILSCKVA DE G S+G+GFVHFET EAA +I +NGMLLN VF
Sbjct: 111 DNKALYDTFSTFGNILSCKVACDEHG-SRGFGFVHFETHEAAQHAINTMNGMLLNDHKVF 169
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGK 241
VG F R+ERE ELG +A FTN+Y+KN D +++ L+E+F +G + S +VM ++ G
Sbjct: 170 VGHFKSRREREVELGARAMEFTNIYVKNLQADVDEQGLQELFSQFGKMLSVKVMRDSSGH 229
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
SRGFGFV +E+ E A+KAV NGKEV G++LYVGRAQK+ ER ELKRRFE +K +R+N
Sbjct: 230 SRGFGFVNFETHEEAQKAVVHMNGKEVSGRLLYVGRAQKRVERQNELKRRFEQMKQDRMN 289
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLYVKNLDDSIDDE+LRKEF+P+G ITSAK
Sbjct: 290 RYQGVNLYVKNLDDSIDDEKLRKEFSPYGMITSAK 324
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 79/191 (41%), Positives = 118/191 (61%), Gaps = 10/191 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
N+++KNL +D + + + FS FG +LS KV +D G+S+G+GFV+FET E A K++ +
Sbjct: 192 NIYVKNLQADVDEQGLQELFSQFGKMLSVKVMRDSSGHSRGFGFVNFETHEEAQKAVVHM 251
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKLK 221
NG ++ ++++VG+ R ER+ EL + + N+Y+KN + +DEKL+
Sbjct: 252 NGKEVSGRLLYVGRAQKRVERQNELKRRFEQMKQDRMNRYQGVNLYVKNLDDSIDDEKLR 311
Query: 222 EMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKK 281
+ F PYG ITS +VM G S+GFGFV + SPE A KAV NG+ V K LYV AQ+K
Sbjct: 312 KEFSPYGMITSAKVMTEGGHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRK 371
Query: 282 AERTQELKRRF 292
ER L ++
Sbjct: 372 EERKAILTNQY 382
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 118/228 (51%), Gaps = 17/228 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQD-EQGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + +Y+ FS G ILS +V +D S GY +++F+ A +++
Sbjct: 10 LASLYVGDLHADVTEALLYEKFSPVGPILSIRVCRDVATRRSLGYAYINFQQPADAERAL 69
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N ++ G+ I +++ G + N++IKN +++ L + F +G
Sbjct: 70 DTMNFEMIK------GQPIRIMWSQRDPGLRKSGVGNIFIKNLEASIDNKALYDTFSTFG 123
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S +V ++ SRGFGFV +E+ E A+ A+ NG ++ ++VG + + ER EL
Sbjct: 124 NILSCKVACDEHGSRGFGFVHFETHEAAQHAINTMNGMLLNDHKVFVGHFKSRREREVEL 183
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
R + N+YVKNL +D++ L++ F+ FG + S K
Sbjct: 184 GAR----------AMEFTNIYVKNLQADVDEQGLQELFSQFGKMLSVK 221
>gi|157817831|ref|NP_001099621.1| poly(A) binding protein, cytoplasmic 2 [Rattus norvegicus]
gi|149017412|gb|EDL76463.1| poly A binding protein, cytoplasmic 2 (predicted) [Rattus
norvegicus]
Length = 630
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 183/275 (66%), Positives = 221/275 (80%), Gaps = 4/275 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD +KG+P+RIMWSQRDPSLR+SGVGNVFIKNL+K+I
Sbjct: 53 GYASVNFEQP--ADAERALDTMNFDVIKGKPVRIMWSQRDPSLRRSGVGNVFIKNLNKTI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFSAFG+ILSCKV DE G SKG+GFVHFETEEAA ++IEK+NGMLLN + VF
Sbjct: 111 DNKALYDTFSAFGNILSCKVVCDENG-SKGHGFVHFETEEAAERAIEKMNGMLLNDRKVF 169
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDG-K 241
VG+F RKERE ELG + K FTNVYIKNFG+ +D+ L +F +G + S +VM ++G K
Sbjct: 170 VGQFKSRKEREAELGTRTKEFTNVYIKNFGDRMDDKTLNGLFGRFGQVLSVKVMTDEGGK 229
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
S+GFGFV++E E A+KAV NGKE++GK +YVG AQKK +R ELKR+FE + +R
Sbjct: 230 SKGFGFVSFERHEDAQKAVDEMNGKELNGKHIYVGPAQKKVDRHIELKRKFEQVTQDRGI 289
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQG+NLYVKNLDD IDDERL+KEF+PFGTITS K
Sbjct: 290 RYQGINLYVKNLDDGIDDERLQKEFSPFGTITSTK 324
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 95/239 (39%), Positives = 135/239 (56%), Gaps = 20/239 (8%)
Query: 78 ERALDTMNFDALKGRPIRI----MWSQRDPSL--RKSGVGNVFIKNLDKSIDNKAMYDTF 131
ERA++ MN L R + + +R+ L R NV+IKN +D+K + F
Sbjct: 152 ERAIEKMNGMLLNDRKVFVGQFKSRKEREAELGTRTKEFTNVYIKNFGDRMDDKTLNGLF 211
Query: 132 SAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKE 191
FG +LS KV DE G SKG+GFV FE E A K+++++NG LN K ++VG + +
Sbjct: 212 GRFGQVLSVKVMTDEGGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKHIYVGPAQKKVD 271
Query: 192 REKELGEKAKLFT----------NVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDGK 241
R EL K + T N+Y+KN + +DE+L++ F P+GTITS +VM G+
Sbjct: 272 RHIELKRKFEQVTQDRGIRYQGINLYVKNLDDGIDDERLQKEFSPFGTITSTKVMTEGGR 331
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERL 300
S+GFGFV + SPE A KAV NG+ V K LYV AQ+K ER L ++ I+R+
Sbjct: 332 SKGFGFVCFSSPEEATKAVSEMNGRIVATKPLYVALAQRKEERQAHLTNQY----IQRM 386
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 119/228 (52%), Gaps = 17/228 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + +Y+ FS+ G ILS +V +D S GY V+FE A +++
Sbjct: 10 MASLYVGDLHPDVTEAMLYEKFSSAGPILSIRVYRDVITRRSLGYASVNFEQPADAERAL 69
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N ++ K V I +R+ L NV+IKN + +++ L + F +G
Sbjct: 70 DTMNFDVIKGKPV----RIMWSQRDPSLRRSG--VGNVFIKNLNKTIDNKALYDTFSAFG 123
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S +V+ ++ S+G GFV +E+ E AE+A++ NG ++ + ++VG+ + + ER EL
Sbjct: 124 NILSCKVVCDENGSKGHGFVHFETEEAAERAIEKMNGMLLNDRKVFVGQFKSRKEREAEL 183
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
R + N+Y+KN D +DD+ L F FG + S K
Sbjct: 184 GTRTKEF----------TNVYIKNFGDRMDDKTLNGLFGRFGQVLSVK 221
>gi|156360993|ref|XP_001625306.1| predicted protein [Nematostella vectensis]
gi|156212133|gb|EDO33206.1| predicted protein [Nematostella vectensis]
Length = 584
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 172/261 (65%), Positives = 220/261 (84%), Gaps = 1/261 (0%)
Query: 77 TERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGS 136
E+ALDTMNFD +KGRP RIMW QRDPSLRKSGVGN+FIKNLDKSIDNK++YDTFSAFG+
Sbjct: 67 AEKALDTMNFDPIKGRPCRIMWQQRDPSLRKSGVGNIFIKNLDKSIDNKSLYDTFSAFGN 126
Query: 137 ILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKEL 196
ILSCK+AQDE GN KGYGFVHFETE+AA ++I +V+GMLLN K VFVG+++ +KER +++
Sbjct: 127 ILSCKIAQDELGNPKGYGFVHFETEDAALEAIARVDGMLLNDKKVFVGRWMSKKERIEKM 186
Query: 197 GEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGKSRGFGFVAYESPEF 255
G + K FTNVY+KNFG+D +DE++KE+ G I S +VM + +GKS+GFGFV++E+PE
Sbjct: 187 GTQPKKFTNVYVKNFGDDMDDEQMKEICAEAGKIVSLKVMTDPEGKSKGFGFVSFETPEE 246
Query: 256 AEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDD 315
AE+AV NGKE+ G+ L+ GRA+K+AER E+K E + ER+NR+QGVNLY+KNLDD
Sbjct: 247 AEEAVNVLNGKEIGGRRLWAGRAKKRAERAAEVKAEIEKKRQERINRFQGVNLYIKNLDD 306
Query: 316 SIDDERLRKEFTPFGTITSAK 336
IDDERLR+EF+P+GTI+SAK
Sbjct: 307 PIDDERLREEFSPYGTISSAK 327
Score = 144 bits (364), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 83/205 (40%), Positives = 122/205 (59%), Gaps = 12/205 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV++KN +D++ M + + G I+S KV D +G SKG+GFV FET E A +++ +
Sbjct: 195 NVYVKNFGDDMDDEQMKEICAEAGKIVSLKVMTDPEGKSKGFGFVSFETPEEAEEAVNVL 254
Query: 172 NGMLLNSKIVFVGKFIPRKER--------EKELGEKAKLF--TNVYIKNFGEDFNDEKLK 221
NG + + ++ G+ R ER EK+ E+ F N+YIKN + +DE+L+
Sbjct: 255 NGKEIGGRRLWAGRAKKRAERAAEVKAEIEKKRQERINRFQGVNLYIKNLDDPIDDERLR 314
Query: 222 EMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
E F PYGTI+S +VM +D G S+GFGFV + SPE A KAV NG+ + K LYV AQ+
Sbjct: 315 EEFSPYGTISSAKVMKDDKGNSKGFGFVCFSSPEEATKAVTEMNGRILISKPLYVALAQR 374
Query: 281 KAERTQELKRRFEMLKIERLNRYQG 305
+ ER +L + M +I L +QG
Sbjct: 375 REERKAQLAAQ-HMHRISGLRMHQG 398
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 119/229 (51%), Gaps = 18/229 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQD-EQGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + +Y+ FS GS+LS +V +D S GY +V+F+ A K++
Sbjct: 12 IASLYVGDLAPDVTEAMLYEKFSTAGSVLSIRVCRDLVTRRSLGYAYVNFQQPGHAEKAL 71
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N + + I ++R+ L + N++IKN + +++ L + F +G
Sbjct: 72 DTMNFDPIKGRPC----RIMWQQRDPSLRKSG--VGNIFIKNLDKSIDNKSLYDTFSAFG 125
Query: 229 TITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQE 287
I S ++ ++ G +G+GFV +E+ + A +A+ +G ++ K ++VGR K ER ++
Sbjct: 126 NILSCKIAQDELGNPKGYGFVHFETEDAALEAIARVDGMLLNDKKVFVGRWMSKKERIEK 185
Query: 288 LKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ + + N+YVKN D +DDE++++ G I S K
Sbjct: 186 MGTQPKKF----------TNVYVKNFGDDMDDEQMKEICAEAGKIVSLK 224
>gi|6754972|ref|NP_035163.1| poly A binding protein, cytoplasmic 2 [Mus musculus]
gi|473092|emb|CAA53572.1| polyA binding protein, testis-enriched isoform [Mus musculus]
gi|29835142|gb|AAH51134.1| Poly(A) binding protein, cytoplasmic 2 [Mus musculus]
gi|148678113|gb|EDL10060.1| poly A binding protein, cytoplasmic 2 [Mus musculus]
Length = 628
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 183/275 (66%), Positives = 220/275 (80%), Gaps = 4/275 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD +KG+P+RIMWSQRDPSLR+SGVGNVFIKNL+K+I
Sbjct: 53 GYASVNFEQP--ADAERALDTMNFDVIKGKPVRIMWSQRDPSLRRSGVGNVFIKNLNKTI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFSAFG+ILSCKV DE G SKG+GFVHFETEEAA ++IEK+NGMLLN + VF
Sbjct: 111 DNKALYDTFSAFGNILSCKVVSDENG-SKGHGFVHFETEEAAERAIEKMNGMLLNDRKVF 169
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDG-K 241
VG+F +KERE ELG K FTNVYIKNFG+ +DE L +F +G I S +VM ++G K
Sbjct: 170 VGRFKSQKEREAELGTGTKEFTNVYIKNFGDRMDDETLNGLFGRFGQILSVKVMTDEGGK 229
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
S+GFGFV++E E A+KAV NGKE++GK +YVGRAQKK +R ELK +FE + ++
Sbjct: 230 SKGFGFVSFERHEDAQKAVDEMNGKELNGKHIYVGRAQKKDDRHTELKHKFEQVTQDKSI 289
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQG+NLYVKNLDD IDDERL+KEF+PFGTITS K
Sbjct: 290 RYQGINLYVKNLDDGIDDERLQKEFSPFGTITSTK 324
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 94/234 (40%), Positives = 136/234 (58%), Gaps = 22/234 (9%)
Query: 78 ERALDTMNFDALKGRPIRI--MWSQRDPSLRKSGVG-------NVFIKNLDKSIDNKAMY 128
ERA++ MN L R + + SQ++ R++ +G NV+IKN +D++ +
Sbjct: 152 ERAIEKMNGMLLNDRKVFVGRFKSQKE---REAELGTGTKEFTNVYIKNFGDRMDDETLN 208
Query: 129 DTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIP 188
F FG ILS KV DE G SKG+GFV FE E A K+++++NG LN K ++VG+
Sbjct: 209 GLFGRFGQILSVKVMTDEGGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKHIYVGRAQK 268
Query: 189 RKEREKELGEKAKLFT----------NVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN 238
+ +R EL K + T N+Y+KN + +DE+L++ F P+GTITS +VM
Sbjct: 269 KDDRHTELKHKFEQVTQDKSIRYQGINLYVKNLDDGIDDERLQKEFSPFGTITSTKVMTE 328
Query: 239 DGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRF 292
G+S+GFGFV + SPE A KAV NG+ V K LYV AQ+K ER L ++
Sbjct: 329 GGRSKGFGFVCFSSPEEATKAVSEMNGRIVATKPLYVALAQRKEERQAHLTNQY 382
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 119/228 (52%), Gaps = 17/228 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + +Y+ FS+ G ILS +V +D S GY V+FE A +++
Sbjct: 10 MASLYVGDLHPDVTEAMLYEKFSSAGPILSIRVYRDVITRRSLGYASVNFEQPADAERAL 69
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N ++ K V I +R+ L NV+IKN + +++ L + F +G
Sbjct: 70 DTMNFDVIKGKPV----RIMWSQRDPSLRRSG--VGNVFIKNLNKTIDNKALYDTFSAFG 123
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S +V++++ S+G GFV +E+ E AE+A++ NG ++ + ++VGR + + ER EL
Sbjct: 124 NILSCKVVSDENGSKGHGFVHFETEEAAERAIEKMNGMLLNDRKVFVGRFKSQKEREAEL 183
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ N+Y+KN D +DDE L F FG I S K
Sbjct: 184 G----------TGTKEFTNVYIKNFGDRMDDETLNGLFGRFGQILSVK 221
>gi|2393873|gb|AAB70164.1| poly(A)-binding protein testis-specific isoform [Mus musculus]
Length = 603
Score = 370 bits (951), Expect = e-100, Method: Compositional matrix adjust.
Identities = 183/275 (66%), Positives = 220/275 (80%), Gaps = 4/275 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD +KG+P+RIMWSQRDPSLR+SGVGNVFIKNL+K+I
Sbjct: 28 GYASVNFEQP--ADAERALDTMNFDVIKGKPVRIMWSQRDPSLRRSGVGNVFIKNLNKTI 85
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFSAFG+ILSCKV DE G SKG+GFVHFETEEAA ++IEK+NGMLLN + VF
Sbjct: 86 DNKALYDTFSAFGNILSCKVVSDENG-SKGHGFVHFETEEAAERAIEKMNGMLLNDRKVF 144
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDG-K 241
VG+F +KERE ELG K FTNVYIKNFG+ +DE L +F +G I S +VM ++G K
Sbjct: 145 VGRFKSQKEREAELGTGTKEFTNVYIKNFGDRMDDETLNGLFGRFGQILSVKVMTDEGGK 204
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
S+GFGFV++E E A+KAV NGKE++GK +YVGRAQKK +R ELK +FE + ++
Sbjct: 205 SKGFGFVSFERHEDAQKAVDEMNGKELNGKHIYVGRAQKKDDRHTELKHKFEQVTQDKSI 264
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQG+NLYVKNLDD IDDERL+KEF+PFGTITS K
Sbjct: 265 RYQGINLYVKNLDDGIDDERLQKEFSPFGTITSTK 299
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 94/234 (40%), Positives = 136/234 (58%), Gaps = 22/234 (9%)
Query: 78 ERALDTMNFDALKGRPIRI--MWSQRDPSLRKSGVG-------NVFIKNLDKSIDNKAMY 128
ERA++ MN L R + + SQ++ R++ +G NV+IKN +D++ +
Sbjct: 127 ERAIEKMNGMLLNDRKVFVGRFKSQKE---REAELGTGTKEFTNVYIKNFGDRMDDETLN 183
Query: 129 DTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIP 188
F FG ILS KV DE G SKG+GFV FE E A K+++++NG LN K ++VG+
Sbjct: 184 GLFGRFGQILSVKVMTDEGGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKHIYVGRAQK 243
Query: 189 RKEREKELGEKAKLFT----------NVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN 238
+ +R EL K + T N+Y+KN + +DE+L++ F P+GTITS +VM
Sbjct: 244 KDDRHTELKHKFEQVTQDKSIRYQGINLYVKNLDDGIDDERLQKEFSPFGTITSTKVMTE 303
Query: 239 DGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRF 292
G+S+GFGFV + SPE A KAV NG+ V K LYV AQ+K ER L ++
Sbjct: 304 GGRSKGFGFVCFSSPEEATKAVSEMNGRIVATKPLYVALAQRKEERQAHLTNQY 357
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 111/211 (52%), Gaps = 17/211 (8%)
Query: 127 MYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGK 185
+Y+ FS+ G ILS +V +D S GY V+FE A ++++ +N ++ K V
Sbjct: 2 LYEKFSSAGPILSIRVYRDVITRRSLGYASVNFEQPADAERALDTMNFDVIKGKPV---- 57
Query: 186 FIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDGKSRGF 245
I +R+ L NV+IKN + +++ L + F +G I S +V++++ S+G
Sbjct: 58 RIMWSQRDPSLRRSG--VGNVFIKNLNKTIDNKALYDTFSAFGNILSCKVVSDENGSKGH 115
Query: 246 GFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQG 305
GFV +E+ E AE+A++ NG ++ + ++VGR + + ER EL +
Sbjct: 116 GFVHFETEEAAERAIEKMNGMLLNDRKVFVGRFKSQKEREAELG----------TGTKEF 165
Query: 306 VNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
N+Y+KN D +DDE L F FG I S K
Sbjct: 166 TNVYIKNFGDRMDDETLNGLFGRFGQILSVK 196
>gi|324509105|gb|ADY43836.1| Polyadenylate-binding protein 1, partial [Ascaris suum]
Length = 661
Score = 369 bits (947), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 181/277 (65%), Positives = 220/277 (79%), Gaps = 5/277 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD + G+PIRIMWSQRDPS+R+SG GN+FIKNLDKSI
Sbjct: 61 GYAYVNFQQP--ADAERALDTMNFDVMYGKPIRIMWSQRDPSMRRSGAGNIFIKNLDKSI 118
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFS FG+ILSCKVA DE+ NSKGYGFVHFETEE+A K+IEKVNGMLL K V+
Sbjct: 119 DNKAIYDTFSMFGNILSCKVANDEESNSKGYGFVHFETEESAQKAIEKVNGMLLEGKKVY 178
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGK 241
VGKF PR R +E+GE A+ FTNV+IKNF ++ + EKL+++F +G ITS VM++ DGK
Sbjct: 179 VGKFQPRAARMREMGETARRFTNVFIKNFADELDKEKLEKLFAKFGKITSCAVMSDADGK 238
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDG--KILYVGRAQKKAERTQELKRRFEMLKIER 299
S+GFGFVA+E+PE AEKAV + ++ + LYV RAQKK ER+ ELKRR+E K+ER
Sbjct: 239 SKGFGFVAFENPEDAEKAVNEMHEYQLPDSERKLYVCRAQKKNERSAELKRRYEQQKVER 298
Query: 300 LNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ RYQGVNLYVKNLDD++DDE LR+ F +G ITSAK
Sbjct: 299 MQRYQGVNLYVKNLDDTVDDEVLRQNFESYGKITSAK 335
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 83/235 (35%), Positives = 132/235 (56%), Gaps = 19/235 (8%)
Query: 77 TERALDTMNFDALKGRPIRI-MWSQRDPSLRKSG-----VGNVFIKNLDKSIDNKAMYDT 130
++A++ +N L+G+ + + + R +R+ G NVFIKN +D + +
Sbjct: 160 AQKAIEKVNGMLLEGKKVYVGKFQPRAARMREMGETARRFTNVFIKNFADELDKEKLEKL 219
Query: 131 FSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLL--NSKIVFVGKFIP 188
F+ FG I SC V D G SKG+GFV FE E A K++ +++ L + + ++V +
Sbjct: 220 FAKFGKITSCAVMSDADGKSKGFGFVAFENPEDAEKAVNEMHEYQLPDSERKLYVCRAQK 279
Query: 189 RKEREKELG--------EKAKLF--TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN 238
+ ER EL E+ + + N+Y+KN + +DE L++ FE YG ITS +VM +
Sbjct: 280 KNERSAELKRRYEQQKVERMQRYQGVNLYVKNLDDTVDDEVLRQNFESYGKITSAKVMCD 339
Query: 239 D-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRF 292
D G+S+GFGFV +E P+ A KAV NGK + K LYV AQ+K +R +L ++
Sbjct: 340 DNGRSKGFGFVCFEKPDEATKAVTEMNGKMMCTKPLYVALAQRKEDRKAQLASQY 394
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 124/231 (53%), Gaps = 24/231 (10%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + +++ FS+ G +LS +V +D S GY +V+F+ A +++
Sbjct: 18 MASLYVGDLHPDVTEAMLFEKFSSAGPVLSIRVCRDAITRRSLGYAYVNFQQPADAERAL 77
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N V GK I +++ + N++IKN + +++ + + F +G
Sbjct: 78 DTMNF------DVMYGKPIRIMWSQRDPSMRRSGAGNIFIKNLDKSIDNKAIYDTFSMFG 131
Query: 229 TITSYRVMNN-DGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQE 287
I S +V N+ + S+G+GFV +E+ E A+KA++ NG ++GK +YVG+ Q +A R +E
Sbjct: 132 NILSCKVANDEESNSKGYGFVHFETEESAQKAIEKVNGMLLEGKKVYVGKFQPRAARMRE 191
Query: 288 L---KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSA 335
+ RRF N+++KN D +D E+L K F FG ITS
Sbjct: 192 MGETARRF-------------TNVFIKNFADELDKEKLEKLFAKFGKITSC 229
>gi|194672643|ref|XP_882298.3| PREDICTED: poly(A) binding protein, cytoplasmic 1-like isoform 19
[Bos taurus]
gi|297482024|ref|XP_002692514.1| PREDICTED: poly(A) binding protein, cytoplasmic 1-like [Bos taurus]
gi|296480945|tpg|DAA23060.1| TPA: polyadenylate-binding protein 1-like [Bos taurus]
Length = 613
Score = 368 bits (944), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 177/275 (64%), Positives = 216/275 (78%), Gaps = 4/275 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G + QP D ERALDTMNF+ +KG+PIRIMWSQRDP LRKSGVGN+FIKNL+ SI
Sbjct: 53 GYAYINFQQP--ADAERALDTMNFEVIKGQPIRIMWSQRDPGLRKSGVGNIFIKNLEDSI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFS FG+ILSCKV DE G S+G+GFVHFET EAA +I +NGMLLN + VF
Sbjct: 111 DNKALYDTFSTFGNILSCKVVCDEHG-SRGFGFVHFETHEAAQNAISTMNGMLLNDRKVF 169
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GK 241
VG F R+ERE ELG +A FTN+Y+KN D ++++L+++F +G + S +VM +D G
Sbjct: 170 VGHFKSRREREVELGARAMEFTNIYVKNLHVDVDEQRLQDLFSQFGKMLSVKVMRDDSGH 229
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
SRGFGFV +E E A+KAV NG+EV G++LYVGRAQK+ ER ELKRRFE +K +RL
Sbjct: 230 SRGFGFVNFEKHEEAQKAVVNMNGREVSGRLLYVGRAQKRVERQNELKRRFEQMKQDRLT 289
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLYVKNLDDSIDDE+LRKEF+P+G ITSAK
Sbjct: 290 RYQGVNLYVKNLDDSIDDEKLRKEFSPYGVITSAK 324
Score = 157 bits (397), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 79/191 (41%), Positives = 118/191 (61%), Gaps = 10/191 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
N+++KNL +D + + D FS FG +LS KV +D+ G+S+G+GFV+FE E A K++ +
Sbjct: 192 NIYVKNLHVDVDEQRLQDLFSQFGKMLSVKVMRDDSGHSRGFGFVNFEKHEEAQKAVVNM 251
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKLK 221
NG ++ ++++VG+ R ER+ EL + + N+Y+KN + +DEKL+
Sbjct: 252 NGREVSGRLLYVGRAQKRVERQNELKRRFEQMKQDRLTRYQGVNLYVKNLDDSIDDEKLR 311
Query: 222 EMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKK 281
+ F PYG ITS +VM G S+GFGFV + SPE A KAV NG+ V K LYV AQ+K
Sbjct: 312 KEFSPYGVITSAKVMTEGGHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRK 371
Query: 282 AERTQELKRRF 292
ER L ++
Sbjct: 372 EERKAILTNQY 382
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 121/228 (53%), Gaps = 17/228 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQD-EQGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + +Y+ FS G ILS +V +D S GY +++F+ A +++
Sbjct: 10 LASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERAL 69
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N ++ G+ I +++ G + N++IKN + +++ L + F +G
Sbjct: 70 DTMNFEVIK------GQPIRIMWSQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFG 123
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S +V+ ++ SRGFGFV +E+ E A+ A+ NG ++ + ++VG + + ER EL
Sbjct: 124 NILSCKVVCDEHGSRGFGFVHFETHEAAQNAISTMNGMLLNDRKVFVGHFKSRREREVEL 183
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
R + N+YVKNL +D++RL+ F+ FG + S K
Sbjct: 184 GAR----------AMEFTNIYVKNLHVDVDEQRLQDLFSQFGKMLSVK 221
>gi|426242065|ref|XP_004014898.1| PREDICTED: polyadenylate-binding protein 1-like [Ovis aries]
Length = 611
Score = 367 bits (943), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 177/275 (64%), Positives = 216/275 (78%), Gaps = 4/275 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G + QP D ERALDTMNF+ +KG+PIRIMWSQRDP LRKSGVGN+FIKNL+ SI
Sbjct: 53 GYAYINFQQP--ADAERALDTMNFEVIKGQPIRIMWSQRDPGLRKSGVGNIFIKNLEDSI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFS FG+ILSCKV DE G S+G+GFVHFET EAA +I +NGMLLN + VF
Sbjct: 111 DNKALYDTFSTFGNILSCKVVCDEHG-SRGFGFVHFETHEAAQNAISTMNGMLLNDRKVF 169
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GK 241
VG F R+ERE ELG +A FTN+Y+KN D ++++L+++F +G + S +VM +D G
Sbjct: 170 VGHFKSRREREVELGARAMEFTNIYVKNLHVDVDEQRLQDLFSQFGKMLSVKVMRDDSGH 229
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
SRGFGFV +E E A+KAV NG+EV G++LYVGRAQK+ ER ELKRRFE +K +RL
Sbjct: 230 SRGFGFVNFEKHEEAQKAVVNMNGREVSGRLLYVGRAQKRVERQNELKRRFEQMKQDRLT 289
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLYVKNLDDSIDDE+LRKEF+P+G ITSAK
Sbjct: 290 RYQGVNLYVKNLDDSIDDEKLRKEFSPYGVITSAK 324
Score = 157 bits (397), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 79/191 (41%), Positives = 118/191 (61%), Gaps = 10/191 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
N+++KNL +D + + D FS FG +LS KV +D+ G+S+G+GFV+FE E A K++ +
Sbjct: 192 NIYVKNLHVDVDEQRLQDLFSQFGKMLSVKVMRDDSGHSRGFGFVNFEKHEEAQKAVVNM 251
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKLK 221
NG ++ ++++VG+ R ER+ EL + + N+Y+KN + +DEKL+
Sbjct: 252 NGREVSGRLLYVGRAQKRVERQNELKRRFEQMKQDRLTRYQGVNLYVKNLDDSIDDEKLR 311
Query: 222 EMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKK 281
+ F PYG ITS +VM G S+GFGFV + SPE A KAV NG+ V K LYV AQ+K
Sbjct: 312 KEFSPYGVITSAKVMTEGGHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRK 371
Query: 282 AERTQELKRRF 292
ER L ++
Sbjct: 372 EERKAILTNQY 382
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 121/228 (53%), Gaps = 17/228 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQD-EQGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + +Y+ FS G ILS +V +D S GY +++F+ A +++
Sbjct: 10 LASLYVGDLPPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERAL 69
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N ++ + + + +++ G + N++IKN + +++ L + F +G
Sbjct: 70 DTMNFEVIKGQPIRI------MWSQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFG 123
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S +V+ ++ SRGFGFV +E+ E A+ A+ NG ++ + ++VG + + ER EL
Sbjct: 124 NILSCKVVCDEHGSRGFGFVHFETHEAAQNAISTMNGMLLNDRKVFVGHFKSRREREVEL 183
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
R + N+YVKNL +D++RL+ F+ FG + S K
Sbjct: 184 GAR----------AMEFTNIYVKNLHVDVDEQRLQDLFSQFGKMLSVK 221
>gi|114682135|ref|XP_514668.2| PREDICTED: poly(A) binding protein, cytoplasmic 1-like isoform 2
[Pan troglodytes]
gi|397511247|ref|XP_003825989.1| PREDICTED: polyadenylate-binding protein 1-like [Pan paniscus]
Length = 614
Score = 367 bits (941), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 178/275 (64%), Positives = 215/275 (78%), Gaps = 4/275 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G + QP D ERALDTMNF+ LKG+PIRIMWSQRDP LRKSGVGN+FIKNL+ SI
Sbjct: 53 GYAYINFQQP--ADAERALDTMNFEMLKGQPIRIMWSQRDPGLRKSGVGNIFIKNLEDSI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFS FG+ILSCKVA DE G S+G+GFVHFET EAA ++I +NGMLLN + VF
Sbjct: 111 DNKALYDTFSTFGNILSCKVACDEHG-SRGFGFVHFETHEAAQQAINTMNGMLLNDRKVF 169
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGK 241
VG F R+ERE ELG +A FTN+Y+KN D +++ L+E+F +G + S +VM +N G
Sbjct: 170 VGHFKSRREREAELGARALEFTNIYVKNLPVDVDEQGLQELFSQFGKMLSVKVMRDNSGH 229
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
SR FGFV +E E A+KAV NGKEV G++LY GRAQK+ ER ELKRRFE +K +RL
Sbjct: 230 SRCFGFVNFEKHEEAQKAVVHMNGKEVSGRLLYAGRAQKRVERQNELKRRFEQMKQDRLR 289
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLYVKNLDDSIDD++LRKEF+P+G ITSAK
Sbjct: 290 RYQGVNLYVKNLDDSIDDDKLRKEFSPYGVITSAK 324
Score = 150 bits (379), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 85/235 (36%), Positives = 136/235 (57%), Gaps = 22/235 (9%)
Query: 77 TERALDTMNFDALKGRPIRI--MWSQRDPSLRKSGVG-------NVFIKNLDKSIDNKAM 127
++A++TMN L R + + S+R+ R++ +G N+++KNL +D + +
Sbjct: 151 AQQAINTMNGMLLNDRKVFVGHFKSRRE---REAELGARALEFTNIYVKNLPVDVDEQGL 207
Query: 128 YDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFI 187
+ FS FG +LS KV +D G+S+ +GFV+FE E A K++ +NG ++ ++++ G+
Sbjct: 208 QELFSQFGKMLSVKVMRDNSGHSRCFGFVNFEKHEEAQKAVVHMNGKEVSGRLLYAGRAQ 267
Query: 188 PRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMN 237
R ER+ EL + + N+Y+KN + +D+KL++ F PYG ITS +VM
Sbjct: 268 KRVERQNELKRRFEQMKQDRLRRYQGVNLYVKNLDDSIDDDKLRKEFSPYGVITSAKVMT 327
Query: 238 NDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRF 292
G S+GFGFV + SPE A KAV NG+ V K LYV AQ+K ER L ++
Sbjct: 328 EGGHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEERKAILTNQY 382
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 121/228 (53%), Gaps = 17/228 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQD-EQGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + +Y+ FS G ILS +V +D S GY +++F+ A +++
Sbjct: 10 LASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERAL 69
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N +L + + + +++ G + N++IKN + +++ L + F +G
Sbjct: 70 DTMNFEMLKGQPIRI------MWSQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFG 123
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S +V ++ SRGFGFV +E+ E A++A+ NG ++ + ++VG + + ER EL
Sbjct: 124 NILSCKVACDEHGSRGFGFVHFETHEAAQQAINTMNGMLLNDRKVFVGHFKSRREREAEL 183
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
R + N+YVKNL +D++ L++ F+ FG + S K
Sbjct: 184 GAR----------ALEFTNIYVKNLPVDVDEQGLQELFSQFGKMLSVK 221
>gi|170579093|ref|XP_001894673.1| polyadenylate-binding protein 1 [Brugia malayi]
gi|158598601|gb|EDP36463.1| polyadenylate-binding protein 1, putative [Brugia malayi]
Length = 655
Score = 367 bits (941), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 180/277 (64%), Positives = 219/277 (79%), Gaps = 5/277 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD + G+PIRIMWSQRDPS+R+SG GN+FIKNLDKSI
Sbjct: 60 GYAYVNFQQP--ADAERALDTMNFDMMYGKPIRIMWSQRDPSMRRSGAGNIFIKNLDKSI 117
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFS FG+ILSCKVA DE+ NSKGYGFVHFETEE+A K+IEKVNGMLL K V+
Sbjct: 118 DNKAIYDTFSMFGNILSCKVANDEESNSKGYGFVHFETEESAQKAIEKVNGMLLEGKKVY 177
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGK 241
VGKF PR R +E+GE A+ FTNVYIKNF ++ + E L+++F +G ITS VM + DGK
Sbjct: 178 VGKFQPRTARLREMGETARRFTNVYIKNFADELDKEALEKLFSKFGKITSAAVMVDADGK 237
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDG--KILYVGRAQKKAERTQELKRRFEMLKIER 299
S+GFGFVA+E+PE AEKAV + E+ G + LYV RAQKK ER+ ELKRR+E K+ER
Sbjct: 238 SKGFGFVAFENPEDAEKAVTEMHEYELPGTERKLYVCRAQKKNERSAELKRRYEQQKVER 297
Query: 300 LNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ RYQGVNLYVKNLDD+++D+ L++ F +G ITSAK
Sbjct: 298 MQRYQGVNLYVKNLDDTVNDDILKQNFEAYGKITSAK 334
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 85/234 (36%), Positives = 131/234 (55%), Gaps = 19/234 (8%)
Query: 78 ERALDTMNFDALKGRPIRI-MWSQRDPSLRKSG-----VGNVFIKNLDKSIDNKAMYDTF 131
++A++ +N L+G+ + + + R LR+ G NV+IKN +D +A+ F
Sbjct: 160 QKAIEKVNGMLLEGKKVYVGKFQPRTARLREMGETARRFTNVYIKNFADELDKEALEKLF 219
Query: 132 SAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLL--NSKIVFVGKFIPR 189
S FG I S V D G SKG+GFV FE E A K++ +++ L + ++V + +
Sbjct: 220 SKFGKITSAAVMVDADGKSKGFGFVAFENPEDAEKAVTEMHEYELPGTERKLYVCRAQKK 279
Query: 190 KEREKELG--------EKAKLF--TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND 239
ER EL E+ + + N+Y+KN + ND+ LK+ FE YG ITS +VM +D
Sbjct: 280 NERSAELKRRYEQQKVERMQRYQGVNLYVKNLDDTVNDDILKQNFEAYGKITSAKVMCDD 339
Query: 240 -GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRF 292
G+S+GFGFV +E P+ A KAV NGK + K LYV AQ+K +R +L ++
Sbjct: 340 NGRSKGFGFVCFEKPDEATKAVTEMNGKMMCTKPLYVALAQRKEDRKAQLASQY 393
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 125/231 (54%), Gaps = 24/231 (10%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + +++ FS+ G +LS +V +D S GY +V+F+ A +++
Sbjct: 17 MASLYVGDLHPDVTEAMLFEKFSSAGPVLSIRVCRDAITRRSLGYAYVNFQQPADAERAL 76
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N ++ GK I +++ + N++IKN + +++ + + F +G
Sbjct: 77 DTMNFDMM------YGKPIRIMWSQRDPSMRRSGAGNIFIKNLDKSIDNKAIYDTFSMFG 130
Query: 229 TITSYRVMNN-DGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQE 287
I S +V N+ + S+G+GFV +E+ E A+KA++ NG ++GK +YVG+ Q + R +E
Sbjct: 131 NILSCKVANDEESNSKGYGFVHFETEESAQKAIEKVNGMLLEGKKVYVGKFQPRTARLRE 190
Query: 288 L---KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSA 335
+ RRF N+Y+KN D +D E L K F+ FG ITSA
Sbjct: 191 MGETARRF-------------TNVYIKNFADELDKEALEKLFSKFGKITSA 228
>gi|312067233|ref|XP_003136646.1| hypothetical protein LOAG_01058 [Loa loa]
gi|307768188|gb|EFO27422.1| hypothetical protein LOAG_01058 [Loa loa]
Length = 655
Score = 366 bits (940), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 180/277 (64%), Positives = 219/277 (79%), Gaps = 5/277 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD + G+PIRIMWSQRDPS+R+SG GN+FIKNLDKSI
Sbjct: 60 GYAYVNFQQP--ADAERALDTMNFDMMYGKPIRIMWSQRDPSMRRSGAGNIFIKNLDKSI 117
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFS FG+ILSCKVA DE+ NSKGYGFVHFETEE+A K+IEKVNGMLL K V+
Sbjct: 118 DNKAIYDTFSMFGNILSCKVANDEESNSKGYGFVHFETEESAQKAIEKVNGMLLEGKKVY 177
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGK 241
VGKF PR R +E+GE A+ FTNVYIKNF ++ + E L+++F +G ITS VM + DGK
Sbjct: 178 VGKFQPRTARLREMGETARRFTNVYIKNFADELDKEALEKLFSKFGKITSAAVMVDADGK 237
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDG--KILYVGRAQKKAERTQELKRRFEMLKIER 299
S+GFGFVA+E+PE AEKAV + E+ G + LYV RAQKK ER+ ELKRR+E K+ER
Sbjct: 238 SKGFGFVAFENPEDAEKAVTEMHEYELPGTERKLYVCRAQKKNERSAELKRRYEQQKVER 297
Query: 300 LNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ RYQGVNLYVKNLDD+++D+ L++ F +G ITSAK
Sbjct: 298 MQRYQGVNLYVKNLDDTVNDDILKQNFEAYGKITSAK 334
Score = 130 bits (328), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 85/235 (36%), Positives = 131/235 (55%), Gaps = 19/235 (8%)
Query: 77 TERALDTMNFDALKGRPIRI-MWSQRDPSLRKSG-----VGNVFIKNLDKSIDNKAMYDT 130
++A++ +N L+G+ + + + R LR+ G NV+IKN +D +A+
Sbjct: 159 AQKAIEKVNGMLLEGKKVYVGKFQPRTARLREMGETARRFTNVYIKNFADELDKEALEKL 218
Query: 131 FSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLL--NSKIVFVGKFIP 188
FS FG I S V D G SKG+GFV FE E A K++ +++ L + ++V +
Sbjct: 219 FSKFGKITSAAVMVDADGKSKGFGFVAFENPEDAEKAVTEMHEYELPGTERKLYVCRAQK 278
Query: 189 RKEREKELG--------EKAKLF--TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN 238
+ ER EL E+ + + N+Y+KN + ND+ LK+ FE YG ITS +VM +
Sbjct: 279 KNERSAELKRRYEQQKVERMQRYQGVNLYVKNLDDTVNDDILKQNFEAYGKITSAKVMCD 338
Query: 239 D-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRF 292
D G+S+GFGFV +E P+ A KAV NGK + K LYV AQ+K +R +L ++
Sbjct: 339 DNGRSKGFGFVCFEKPDEATKAVTEMNGKMMCTKPLYVALAQRKEDRKAQLASQY 393
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 125/231 (54%), Gaps = 24/231 (10%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + +++ FS+ G +LS +V +D S GY +V+F+ A +++
Sbjct: 17 MASLYVGDLHPDVTEAMLFEKFSSAGPVLSIRVCRDAITRRSLGYAYVNFQQPADAERAL 76
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N ++ GK I +++ + N++IKN + +++ + + F +G
Sbjct: 77 DTMNFDMM------YGKPIRIMWSQRDPSMRRSGAGNIFIKNLDKSIDNKAIYDTFSMFG 130
Query: 229 TITSYRVMNN-DGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQE 287
I S +V N+ + S+G+GFV +E+ E A+KA++ NG ++GK +YVG+ Q + R +E
Sbjct: 131 NILSCKVANDEESNSKGYGFVHFETEESAQKAIEKVNGMLLEGKKVYVGKFQPRTARLRE 190
Query: 288 L---KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSA 335
+ RRF N+Y+KN D +D E L K F+ FG ITSA
Sbjct: 191 MGETARRF-------------TNVYIKNFADELDKEALEKLFSKFGKITSA 228
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 79/162 (48%), Gaps = 22/162 (13%)
Query: 106 RKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAAN 165
R GV N+++KNLD ++++ + F A+G I S KV D+ G SKG+GFV FE + A
Sbjct: 300 RYQGV-NLYVKNLDDTVNDDILKQNFEAYGKITSAKVMCDDNGRSKGFGFVCFEKPDEAT 358
Query: 166 KSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEK-------------AKLFTNVYIKNFG 212
K++ ++NG ++ +K ++V +++R+ +L + + VY G
Sbjct: 359 KAVTEMNGKMMCTKPLYVALAQRKEDRKAQLASQYMQRLASIRMHNAGSMPGTVYTPGTG 418
Query: 213 EDFNDEKL--KEMFEPYGTITSYRVM------NNDGKSRGFG 246
F L + F P TI ++ N G + GFG
Sbjct: 419 GFFVSSTLQNQRAFMPTATIPGAQMRGTTPRWNTIGAAAGFG 460
>gi|194044632|ref|XP_001927442.1| PREDICTED: poly(A) binding protein, cytoplasmic 1-like [Sus scrofa]
Length = 610
Score = 366 bits (940), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 176/262 (67%), Positives = 209/262 (79%), Gaps = 2/262 (0%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D ERALDTMNF+ +KG+PIRIMWSQRDP LRKSGVGNVFIKNL+ SIDNKA+YDTFS FG
Sbjct: 64 DAERALDTMNFEVIKGQPIRIMWSQRDPGLRKSGVGNVFIKNLEDSIDNKALYDTFSTFG 123
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCKV D+ G S+G+GFVHFET EAA +I +NGMLLN + VFVG F R+ERE E
Sbjct: 124 NILSCKVVCDDHG-SRGFGFVHFETHEAAQNAIRTMNGMLLNDRKVFVGHFKSRREREAE 182
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPE 254
LG +A FTN+Y+KN D ++ L+++F +G I S +VM +D G SRGFGFV +E E
Sbjct: 183 LGARALEFTNIYVKNLHVDVDERCLQDLFSQFGKILSVKVMRDDSGHSRGFGFVNFEKHE 242
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A+KAV NGKEV G++LYVGRAQK+ ER ELKRRFE +K +RL RYQGVNLYVKNLD
Sbjct: 243 DAQKAVTDMNGKEVSGRLLYVGRAQKRVERQNELKRRFEQMKQDRLTRYQGVNLYVKNLD 302
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
DSIDDE+LRKEF P+G ITSAK
Sbjct: 303 DSIDDEKLRKEFAPYGMITSAK 324
Score = 160 bits (405), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 83/200 (41%), Positives = 123/200 (61%), Gaps = 14/200 (7%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
N+++KNL +D + + D FS FG ILS KV +D+ G+S+G+GFV+FE E A K++ +
Sbjct: 192 NIYVKNLHVDVDERCLQDLFSQFGKILSVKVMRDDSGHSRGFGFVNFEKHEDAQKAVTDM 251
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKLK 221
NG ++ ++++VG+ R ER+ EL + + N+Y+KN + +DEKL+
Sbjct: 252 NGKEVSGRLLYVGRAQKRVERQNELKRRFEQMKQDRLTRYQGVNLYVKNLDDSIDDEKLR 311
Query: 222 EMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKK 281
+ F PYG ITS +VM G S+GFGFV + SPE A KAV NG+ V K LYV AQ+K
Sbjct: 312 KEFAPYGMITSAKVMTEGGHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRK 371
Query: 282 AERTQELKRRFEMLKIERLN 301
ER L ++ I+RL+
Sbjct: 372 EERKAILTNQY----IQRLS 387
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 120/228 (52%), Gaps = 17/228 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQD-EQGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + +Y+ FS G ILS +V +D S GY +++F+ A +++
Sbjct: 10 LASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERAL 69
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N ++ + + + +++ G + NV+IKN + +++ L + F +G
Sbjct: 70 DTMNFEVIKGQPIRI------MWSQRDPGLRKSGVGNVFIKNLEDSIDNKALYDTFSTFG 123
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S +V+ +D SRGFGFV +E+ E A+ A++ NG ++ + ++VG + + ER EL
Sbjct: 124 NILSCKVVCDDHGSRGFGFVHFETHEAAQNAIRTMNGMLLNDRKVFVGHFKSRREREAEL 183
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
R + N+YVKNL +D+ L+ F+ FG I S K
Sbjct: 184 GAR----------ALEFTNIYVKNLHVDVDERCLQDLFSQFGKILSVK 221
>gi|73992493|ref|XP_534430.2| PREDICTED: poly(A) binding protein, cytoplasmic 1-like [Canis lupus
familiaris]
Length = 611
Score = 366 bits (939), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 174/262 (66%), Positives = 212/262 (80%), Gaps = 2/262 (0%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D ERALDTMNF+ +KG+PIRIMWSQRDP LRKSGVGN+FIKNL+ SIDNKA+YDTFS FG
Sbjct: 64 DAERALDTMNFEVIKGQPIRIMWSQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFG 123
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCKV D+ G S+G+GFVHFET EAA ++I +NGMLLN + VFVG F R+ERE E
Sbjct: 124 NILSCKVVCDDHG-SRGFGFVHFETHEAAQQAITTMNGMLLNDRKVFVGHFKSRREREVE 182
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPE 254
LG +A FTN+Y+KN D +++ L+++F +G + S +VM +D G SRGFGFV ++ E
Sbjct: 183 LGARAMEFTNIYVKNLHVDVDEQGLQDLFSRFGKMLSVKVMRDDSGHSRGFGFVNFQKHE 242
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A+KAV NGKEV G++LYVGRAQK+ ER ELKRRFE LK +RL RYQGVNLYVKNLD
Sbjct: 243 EAQKAVMDMNGKEVSGRLLYVGRAQKRVERQSELKRRFEQLKQDRLTRYQGVNLYVKNLD 302
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
DSIDDE+LRKEF+P+G ITSAK
Sbjct: 303 DSIDDEKLRKEFSPYGVITSAK 324
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 77/191 (40%), Positives = 118/191 (61%), Gaps = 10/191 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
N+++KNL +D + + D FS FG +LS KV +D+ G+S+G+GFV+F+ E A K++ +
Sbjct: 192 NIYVKNLHVDVDEQGLQDLFSRFGKMLSVKVMRDDSGHSRGFGFVNFQKHEEAQKAVMDM 251
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKLK 221
NG ++ ++++VG+ R ER+ EL + + N+Y+KN + +DEKL+
Sbjct: 252 NGKEVSGRLLYVGRAQKRVERQSELKRRFEQLKQDRLTRYQGVNLYVKNLDDSIDDEKLR 311
Query: 222 EMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKK 281
+ F PYG ITS +VM G S+GFGFV + SPE A KAV NG+ + K LYV AQ+K
Sbjct: 312 KEFSPYGVITSAKVMTEGGHSKGFGFVCFSSPEEATKAVTEMNGRILGTKPLYVALAQRK 371
Query: 282 AERTQELKRRF 292
ER L ++
Sbjct: 372 EERKAILTNQY 382
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 121/228 (53%), Gaps = 17/228 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQD-EQGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + +Y+ FS G ILS +V +D S GY +++F+ A +++
Sbjct: 10 LASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERAL 69
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N ++ + + + +++ G + N++IKN + +++ L + F +G
Sbjct: 70 DTMNFEVIKGQPIRI------MWSQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFG 123
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S +V+ +D SRGFGFV +E+ E A++A+ NG ++ + ++VG + + ER EL
Sbjct: 124 NILSCKVVCDDHGSRGFGFVHFETHEAAQQAITTMNGMLLNDRKVFVGHFKSRREREVEL 183
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
R + N+YVKNL +D++ L+ F+ FG + S K
Sbjct: 184 GAR----------AMEFTNIYVKNLHVDVDEQGLQDLFSRFGKMLSVK 221
>gi|354476610|ref|XP_003500517.1| PREDICTED: polyadenylate-binding protein 1-like [Cricetulus
griseus]
Length = 637
Score = 366 bits (939), Expect = 9e-99, Method: Compositional matrix adjust.
Identities = 178/272 (65%), Positives = 218/272 (80%), Gaps = 12/272 (4%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D ERALDTMNFD +KG+P+RIMWSQRDPSLRKSGVGN+F+KNLD+SID+KA+YDTFSAFG
Sbjct: 64 DAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFVKNLDRSIDSKALYDTFSAFG 123
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCKV DE G SKGYGFVHFET+E A ++IEK+NGM LN + VFVG+F R++R+ E
Sbjct: 124 NILSCKVVCDENG-SKGYGFVHFETQEEAERAIEKMNGMFLNDRKVFVGRFKSRRDRQAE 182
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPE 254
LG +AK FTNVYIKN GED +DE+L+ +F +G S +VM ++ GKS+GFGFV++E E
Sbjct: 183 LGARAKEFTNVYIKNLGEDMDDERLQGLFSKFGPALSVKVMTDESGKSKGFGFVSFERHE 242
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEML-----KIERLN-----RYQ 304
A KAV NGK+++GK +YVGRAQKK ER ELK +F + K+E++ R Q
Sbjct: 243 DARKAVDEMNGKDLNGKQIYVGRAQKKVERQTELKHKFGQMKQDKHKVEQVPQDISVRCQ 302
Query: 305 GVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
GVNLYVKNLDD IDDERLRKEF+PFGTITSAK
Sbjct: 303 GVNLYVKNLDDGIDDERLRKEFSPFGTITSAK 334
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 99/266 (37%), Positives = 145/266 (54%), Gaps = 36/266 (13%)
Query: 76 DTERALDTMNFDALKGRPIRI--MWSQRDPSLRKSGVG-------NVFIKNLDKSIDNKA 126
+ ERA++ MN L R + + S+RD R++ +G NV+IKNL + +D++
Sbjct: 150 EAERAIEKMNGMFLNDRKVFVGRFKSRRD---RQAELGARAKEFTNVYIKNLGEDMDDER 206
Query: 127 MYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKF 186
+ FS FG LS KV DE G SKG+GFV FE E A K+++++NG LN K ++VG+
Sbjct: 207 LQGLFSKFGPALSVKVMTDESGKSKGFGFVSFERHEDARKAVDEMNGKDLNGKQIYVGRA 266
Query: 187 IPRKEREKELGEKAKLF--------------------TNVYIKNFGEDFNDEKLKEMFEP 226
+ ER+ EL K N+Y+KN + +DE+L++ F P
Sbjct: 267 QKKVERQTELKHKFGQMKQDKHKVEQVPQDISVRCQGVNLYVKNLDDGIDDERLRKEFSP 326
Query: 227 YGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQ 286
+GTITS +V G+S+GFGFV + SPE A KAV NG+ V K LYV AQ+K ER
Sbjct: 327 FGTITSAKVTMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQA 386
Query: 287 ELKRRFEMLKIERLNRYQGVNLYVKN 312
L ++ ++R+ V+ V N
Sbjct: 387 HLSNQY----MQRMASTSAVSSPVIN 408
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 126/236 (53%), Gaps = 17/236 (7%)
Query: 102 DPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQG-NSKGYGFVHFET 160
+PS + ++++ +L + +Y+ FS+ G ILS +V +D S GY V+F+
Sbjct: 2 NPSDPSYSLASLYVGDLHPDVTEAMLYEKFSSAGPILSIRVYRDRTTRRSLGYASVNFQQ 61
Query: 161 EEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKL 220
E A ++++ +N ++ K V I +R+ L + N+++KN + + L
Sbjct: 62 LEDAERALDTMNFDVIKGKPV----RIMWSQRDPSLRKSG--VGNIFVKNLDRSIDSKAL 115
Query: 221 KEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
+ F +G I S +V+ ++ S+G+GFV +E+ E AE+A++ NG ++ + ++VGR +
Sbjct: 116 YDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEEAERAIEKMNGMFLNDRKVFVGRFKS 175
Query: 281 KAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ +R EL R + N+Y+KNL + +DDERL+ F+ FG S K
Sbjct: 176 RRDRQAELGARAKEF----------TNVYIKNLGEDMDDERLQGLFSKFGPALSVK 221
>gi|419961|pir||JN0573 polyadenylate-binding protein - fruit fly (Drosophila melanogaster)
Length = 598
Score = 366 bits (939), Expect = 9e-99, Method: Compositional matrix adjust.
Identities = 197/275 (71%), Positives = 223/275 (81%), Gaps = 18/275 (6%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMN ++ +PIRIMWSQRDPSLR+SGVGNVFIKNLD++
Sbjct: 42 GYAYVNFQQP--ADAERALDTMNL--VRNKPIRIMWSQRDPSLRRSGVGNVFIKNLDRA- 96
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
NKA+YDTFSAFG+ILSCKVA DE+GNSKGYGFVH TEEAAN SI+KVNGMLLN K V+
Sbjct: 97 -NKAIYDTFSAFGNILSCKVATDEKGNSKGYGFVH--TEEAANTSIDKVNGMLLNGKKVY 153
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGK 241
VGKFIPRKE+E EKAKLFTNVY+KNF EDF+DEKLKE FEPYG IT +VM+ DGK
Sbjct: 154 VGKFIPRKEQE----EKAKLFTNVYVKNFTEDFDDEKLKEFFEPYGKIT--KVMSKEDGK 207
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
S+GFGFVA+E+ E AE AVQA NGK +GK LYV RAQKKAER QELKR+FE LK +R
Sbjct: 208 SKGFGFVAFETTEAAEAAVQALNGKG-EGKSLYVARAQKKAERQQELKRKFEELKQKR-- 264
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
GVNLYVKNLDD+IDD+RLR F+P+G ITSAK
Sbjct: 265 HEFGVNLYVKNLDDTIDDDRLRIAFSPYGNITSAK 299
Score = 114 bits (284), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 69/189 (36%), Positives = 107/189 (56%), Gaps = 14/189 (7%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV++KN + D++ + + F +G I KV E G SKG+GFV FET EAA +++ +
Sbjct: 172 NVYVKNFTEDFDDEKLKEFFEPYGKI--TKVMSKEDGKSKGFGFVAFETTEAAEAAVQAL 229
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEK--------AKLFTNVYIKNFGEDFNDEKLKEM 223
NG K ++V + + ER++EL K + N+Y+KN + +D++L+
Sbjct: 230 NGKG-EGKSLYVARAQKKAERQQELKRKFEELKQKRHEFGVNLYVKNLDDTIDDDRLRIA 288
Query: 224 FEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAE 283
F PYG ITS +V + +G+S+GFGFV + A AV NG+ V LYV AQ+K E
Sbjct: 289 FSPYGNITSAKV-DEEGRSKGFGFVCFNPESEATCAVTELNGRVVGS--LYVALAQRKEE 345
Query: 284 RTQELKRRF 292
R +L ++
Sbjct: 346 RKADLASQY 354
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 118/226 (52%), Gaps = 30/226 (13%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + ++ ++D FS+ G ++ +V +D S GY +V+F+ A +++
Sbjct: 1 MASLYVGDLPQDVNESGLFDKFSSAGPVI--RVCRDVITRRSLGYAYVNFQQPADAERAL 58
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N ++ N I + +R+ L NV+IKN D ++ + + F +G
Sbjct: 59 DTMN-LVRNKPIRIMW-----SQRDPSLRRSG--VGNVFIKNL--DRANKAIYDTFSAFG 108
Query: 229 TITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQE 287
I S +V ++ G S+G+GFV E E A ++ NG ++GK +YVG+ + E+ +E
Sbjct: 109 NILSCKVATDEKGNSKGYGFVHTE--EAANTSIDKVNGMLLNGKKVYVGKFIPRKEQ-EE 165
Query: 288 LKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTIT 333
+ F N+YVKN + DDE+L++ F P+G IT
Sbjct: 166 KAKLF-------------TNVYVKNFTEDFDDEKLKEFFEPYGKIT 198
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 64/106 (60%), Gaps = 5/106 (4%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
N+++KNLD +ID+ + FS +G+I S KV DE+G SKG+GFV F E A ++ ++
Sbjct: 270 NLYVKNLDDTIDDDRLRIAFSPYGNITSAKV--DEEGRSKGFGFVCFNPESEATCAVTEL 327
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEK-AKLFTNVYIKNFGEDFN 216
NG ++ S ++V ++ER+ +L + + T + ++ G+ N
Sbjct: 328 NGRVVGS--LYVALAQRKEERKADLASQYMRHMTGMRMQQLGQQPN 371
>gi|281345572|gb|EFB21156.1| hypothetical protein PANDA_005635 [Ailuropoda melanoleuca]
Length = 605
Score = 365 bits (938), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 175/275 (63%), Positives = 216/275 (78%), Gaps = 4/275 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G + QP D ERALDTMNF+ +KG+P+RIMWSQRDP LRKSGVGN+FIKNL+ SI
Sbjct: 53 GYAYINFQQP--ADAERALDTMNFEVIKGQPVRIMWSQRDPGLRKSGVGNIFIKNLEDSI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFS FG+ILSCKV D+ G S+G+GFVHFET EAA+++I +NGMLLN + VF
Sbjct: 111 DNKALYDTFSTFGNILSCKVVCDDHG-SRGFGFVHFETHEAAHQAIATMNGMLLNDRKVF 169
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GK 241
VG F R+ERE ELG +A FTN+Y+KN D +++ L+++F +G + S +VM +D G
Sbjct: 170 VGHFKSRREREAELGARAMEFTNIYVKNLHVDVDEQGLQDLFSQFGKMLSVKVMRDDIGH 229
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
SRGFGFV +E E A+KAV NGKEV G++LYVGRAQK+ ER ELKRRFE +K +R
Sbjct: 230 SRGFGFVNFEKHEEAQKAVMDMNGKEVSGRLLYVGRAQKRVERQNELKRRFEQMKQDRAT 289
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLYVKNLDDSIDDE+LRKEF+P+G ITSAK
Sbjct: 290 RYQGVNLYVKNLDDSIDDEKLRKEFSPYGVITSAK 324
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 79/191 (41%), Positives = 118/191 (61%), Gaps = 10/191 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
N+++KNL +D + + D FS FG +LS KV +D+ G+S+G+GFV+FE E A K++ +
Sbjct: 192 NIYVKNLHVDVDEQGLQDLFSQFGKMLSVKVMRDDIGHSRGFGFVNFEKHEEAQKAVMDM 251
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKLK 221
NG ++ ++++VG+ R ER+ EL + + N+Y+KN + +DEKL+
Sbjct: 252 NGKEVSGRLLYVGRAQKRVERQNELKRRFEQMKQDRATRYQGVNLYVKNLDDSIDDEKLR 311
Query: 222 EMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKK 281
+ F PYG ITS +VM G S+GFGFV + SPE A KAV NG+ V K LYV AQ+K
Sbjct: 312 KEFSPYGVITSAKVMTEGGHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRK 371
Query: 282 AERTQELKRRF 292
ER L ++
Sbjct: 372 EERKAILTNQY 382
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 120/228 (52%), Gaps = 17/228 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQD-EQGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + +Y+ FS G ILS +V +D S GY +++F+ A +++
Sbjct: 10 LASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERAL 69
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N ++ + V + +++ G + N++IKN + +++ L + F +G
Sbjct: 70 DTMNFEVIKGQPVRI------MWSQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFG 123
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S +V+ +D SRGFGFV +E+ E A +A+ NG ++ + ++VG + + ER EL
Sbjct: 124 NILSCKVVCDDHGSRGFGFVHFETHEAAHQAIATMNGMLLNDRKVFVGHFKSRREREAEL 183
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
R + N+YVKNL +D++ L+ F+ FG + S K
Sbjct: 184 GAR----------AMEFTNIYVKNLHVDVDEQGLQDLFSQFGKMLSVK 221
>gi|297707183|ref|XP_002830392.1| PREDICTED: poly(A) binding protein, cytoplasmic 1-like [Pongo
abelii]
Length = 614
Score = 365 bits (937), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 177/275 (64%), Positives = 215/275 (78%), Gaps = 4/275 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G + QP D ERALDTMNF+ LKG+PIRIMWSQRDP LRKSGVGN+FIKNL+ SI
Sbjct: 53 GYAYINFQQP--ADAERALDTMNFEMLKGQPIRIMWSQRDPGLRKSGVGNIFIKNLEDSI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFS FG+ILSCKVA DE G S+G+GFVHFET EAA ++I +NGMLLN + VF
Sbjct: 111 DNKALYDTFSTFGNILSCKVACDEHG-SRGFGFVHFETHEAAQQAINTMNGMLLNDRKVF 169
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGK 241
VG F R+ERE ELG +A FTN+Y+KN D +++ L+++F +G + S +VM +N G
Sbjct: 170 VGHFKSRREREAELGARALEFTNIYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRDNSGH 229
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
SR FGFV +E E A+KAV NGKEV G++LY GRAQK+ ER ELKRRFE +K +RL
Sbjct: 230 SRCFGFVNFEKHEEAQKAVVHMNGKEVSGRLLYAGRAQKRVERQNELKRRFEQMKQDRLR 289
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLYVKNLDDSIDD++LRKEF+P+G ITSAK
Sbjct: 290 RYQGVNLYVKNLDDSIDDDKLRKEFSPYGVITSAK 324
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 86/235 (36%), Positives = 136/235 (57%), Gaps = 22/235 (9%)
Query: 77 TERALDTMNFDALKGRPIRI--MWSQRDPSLRKSGVG-------NVFIKNLDKSIDNKAM 127
++A++TMN L R + + S+R+ R++ +G N+++KNL +D + +
Sbjct: 151 AQQAINTMNGMLLNDRKVFVGHFKSRRE---REAELGARALEFTNIYVKNLPVDVDEQGL 207
Query: 128 YDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFI 187
D FS FG +LS KV +D G+S+ +GFV+FE E A K++ +NG ++ ++++ G+
Sbjct: 208 QDLFSQFGKMLSVKVMRDNSGHSRCFGFVNFEKHEEAQKAVVHMNGKEVSGRLLYAGRAQ 267
Query: 188 PRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMN 237
R ER+ EL + + N+Y+KN + +D+KL++ F PYG ITS +VM
Sbjct: 268 KRVERQNELKRRFEQMKQDRLRRYQGVNLYVKNLDDSIDDDKLRKEFSPYGVITSAKVMT 327
Query: 238 NDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRF 292
G S+GFGFV + SPE A KAV NG+ V K LYV AQ+K ER L ++
Sbjct: 328 EGGHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEERKAILTNQY 382
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 120/228 (52%), Gaps = 17/228 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQD-EQGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + +Y+ FS G ILS +V +D S GY +++F+ A +++
Sbjct: 10 LASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERAL 69
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N +L G+ I +++ G + N++IKN + +++ L + F +G
Sbjct: 70 DTMNFEMLK------GQPIRIMWSQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFG 123
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S +V ++ SRGFGFV +E+ E A++A+ NG ++ + ++VG + + ER EL
Sbjct: 124 NILSCKVACDEHGSRGFGFVHFETHEAAQQAINTMNGMLLNDRKVFVGHFKSRREREAEL 183
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
R + N+YVKNL +D++ L+ F+ FG + S K
Sbjct: 184 GAR----------ALEFTNIYVKNLPVDVDEQGLQDLFSQFGKMLSVK 221
>gi|185135971|ref|NP_001118228.1| polyadenylate-binding protein 1-like [Homo sapiens]
gi|74754038|sp|Q4VXU2.1|PAP1L_HUMAN RecName: Full=Polyadenylate-binding protein 1-like
gi|119596298|gb|EAW75892.1| hCG2019100, isoform CRA_f [Homo sapiens]
Length = 614
Score = 365 bits (937), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 177/275 (64%), Positives = 215/275 (78%), Gaps = 4/275 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G + QP D ERALDTMNF+ LKG+PIRIMWSQRDP LRKSGVGN+FIKNL+ SI
Sbjct: 53 GYAYINFQQP--ADAERALDTMNFEMLKGQPIRIMWSQRDPGLRKSGVGNIFIKNLEDSI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFS FG+ILSCKVA DE G S+G+GFVHFET EAA ++I +NGMLLN + VF
Sbjct: 111 DNKALYDTFSTFGNILSCKVACDEHG-SRGFGFVHFETHEAAQQAINTMNGMLLNDRKVF 169
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGK 241
VG F R+ERE ELG +A FTN+Y+KN D +++ L+++F +G + S +VM +N G
Sbjct: 170 VGHFKSRREREAELGARALEFTNIYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRDNSGH 229
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
SR FGFV +E E A+KAV NGKEV G++LY GRAQK+ ER ELKRRFE +K +RL
Sbjct: 230 SRCFGFVNFEKHEEAQKAVVHMNGKEVSGRLLYAGRAQKRVERQNELKRRFEQMKQDRLR 289
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLYVKNLDDSIDD++LRKEF+P+G ITSAK
Sbjct: 290 RYQGVNLYVKNLDDSIDDDKLRKEFSPYGVITSAK 324
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 86/235 (36%), Positives = 136/235 (57%), Gaps = 22/235 (9%)
Query: 77 TERALDTMNFDALKGRPIRI--MWSQRDPSLRKSGVG-------NVFIKNLDKSIDNKAM 127
++A++TMN L R + + S+R+ R++ +G N+++KNL +D + +
Sbjct: 151 AQQAINTMNGMLLNDRKVFVGHFKSRRE---REAELGARALEFTNIYVKNLPVDVDEQGL 207
Query: 128 YDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFI 187
D FS FG +LS KV +D G+S+ +GFV+FE E A K++ +NG ++ ++++ G+
Sbjct: 208 QDLFSQFGKMLSVKVMRDNSGHSRCFGFVNFEKHEEAQKAVVHMNGKEVSGRLLYAGRAQ 267
Query: 188 PRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMN 237
R ER+ EL + + N+Y+KN + +D+KL++ F PYG ITS +VM
Sbjct: 268 KRVERQNELKRRFEQMKQDRLRRYQGVNLYVKNLDDSIDDDKLRKEFSPYGVITSAKVMT 327
Query: 238 NDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRF 292
G S+GFGFV + SPE A KAV NG+ V K LYV AQ+K ER L ++
Sbjct: 328 EGGHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEERKAILTNQY 382
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 120/228 (52%), Gaps = 17/228 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQD-EQGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + +Y+ FS G ILS +V +D S GY +++F+ A +++
Sbjct: 10 LASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERAL 69
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N +L + + + +++ G + N++IKN + +++ L + F +G
Sbjct: 70 DTMNFEMLKGQPIRI------MWSQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFG 123
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S +V ++ SRGFGFV +E+ E A++A+ NG ++ + ++VG + + ER EL
Sbjct: 124 NILSCKVACDEHGSRGFGFVHFETHEAAQQAINTMNGMLLNDRKVFVGHFKSRREREAEL 183
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
R + N+YVKNL +D++ L+ F+ FG + S K
Sbjct: 184 GAR----------ALEFTNIYVKNLPVDVDEQGLQDLFSQFGKMLSVK 221
>gi|344279674|ref|XP_003411612.1| PREDICTED: polyadenylate-binding protein 1 [Loxodonta africana]
Length = 612
Score = 365 bits (937), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 174/262 (66%), Positives = 212/262 (80%), Gaps = 2/262 (0%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D ERALDTMNF+ +KG+PIRIMWSQRDP LRKSGVGN+FIKNL+ SIDNKA+YDTFS FG
Sbjct: 64 DAERALDTMNFEVIKGQPIRIMWSQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFG 123
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCKV DE G S+G+GFVHFET EAA ++I +NGMLLN + VFVG F R+ERE E
Sbjct: 124 NILSCKVVCDEHG-SRGFGFVHFETHEAAQQAISTMNGMLLNDRKVFVGHFKSRREREAE 182
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPE 254
L +A FTN+Y+KN D +++ L+++F +G + S +VM +N+G SRGFGFV +E E
Sbjct: 183 LRARAMEFTNIYVKNLQVDMDEQGLQDLFSQFGKLLSVKVMKDNNGHSRGFGFVNFEKHE 242
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A+KAV NGKEV G+ LYVGRAQK+ ER ELKR+FE +K +RLNRYQGVNLYVKNLD
Sbjct: 243 EAQKAVMDMNGKEVSGRQLYVGRAQKRVERQNELKRKFEQMKQDRLNRYQGVNLYVKNLD 302
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
DSIDDE+LRKEF+P+G ITSAK
Sbjct: 303 DSIDDEKLRKEFSPYGVITSAK 324
Score = 157 bits (398), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 94/250 (37%), Positives = 142/250 (56%), Gaps = 22/250 (8%)
Query: 77 TERALDTMNFDALKGRPIRI----MWSQRDPSLRKSGV--GNVFIKNLDKSIDNKAMYDT 130
++A+ TMN L R + + +R+ LR + N+++KNL +D + + D
Sbjct: 151 AQQAISTMNGMLLNDRKVFVGHFKSRREREAELRARAMEFTNIYVKNLQVDMDEQGLQDL 210
Query: 131 FSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRK 190
FS FG +LS KV +D G+S+G+GFV+FE E A K++ +NG ++ + ++VG+ R
Sbjct: 211 FSQFGKLLSVKVMKDNNGHSRGFGFVNFEKHEEAQKAVMDMNGKEVSGRQLYVGRAQKRV 270
Query: 191 EREKELGEKAKLF----------TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDG 240
ER+ EL K + N+Y+KN + +DEKL++ F PYG ITS +VM G
Sbjct: 271 ERQNELKRKFEQMKQDRLNRYQGVNLYVKNLDDSIDDEKLRKEFSPYGVITSAKVMTEGG 330
Query: 241 KSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERL 300
S+GFGFV + SPE A KAV NG+ + K LYV AQ+K ER L ++ ++RL
Sbjct: 331 HSKGFGFVCFSSPEEATKAVTEMNGRIIGTKPLYVALAQRKEERRAILSNQY----MQRL 386
Query: 301 N--RYQGVNL 308
+ R GV L
Sbjct: 387 STMRALGVPL 396
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 120/228 (52%), Gaps = 17/228 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQD-EQGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + +Y+ F G ILS +V +D S Y +++F+ A +++
Sbjct: 10 LASLYVGDLHADVTEAMLYEKFLPAGPILSIRVCRDVATRRSLRYAYINFQQPADAERAL 69
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N ++ + + + +++ G + N++IKN + +++ L + F +G
Sbjct: 70 DTMNFEVIKGQPIRI------MWSQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFG 123
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S +V+ ++ SRGFGFV +E+ E A++A+ NG ++ + ++VG + + ER EL
Sbjct: 124 NILSCKVVCDEHGSRGFGFVHFETHEAAQQAISTMNGMLLNDRKVFVGHFKSRREREAEL 183
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ R + N+YVKNL +D++ L+ F+ FG + S K
Sbjct: 184 RAR----------AMEFTNIYVKNLQVDMDEQGLQDLFSQFGKLLSVK 221
>gi|426391820|ref|XP_004062264.1| PREDICTED: polyadenylate-binding protein 1-like isoform 1 [Gorilla
gorilla gorilla]
Length = 614
Score = 365 bits (937), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 177/275 (64%), Positives = 215/275 (78%), Gaps = 4/275 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G + QP D ERALDTMNF+ LKG+PIRIMWSQRDP LRKSGVGN+FIKNL+ SI
Sbjct: 53 GYAYINFQQP--ADAERALDTMNFEMLKGQPIRIMWSQRDPGLRKSGVGNIFIKNLEDSI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFS FG+ILSCKVA DE G S+G+GFVHFET EAA ++I +NGMLLN + VF
Sbjct: 111 DNKALYDTFSTFGNILSCKVACDEHG-SRGFGFVHFETHEAAQQAINTMNGMLLNDRKVF 169
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGK 241
VG F R+ERE ELG +A FTN+Y+KN D +++ L+++F +G + S +VM +N G
Sbjct: 170 VGHFKSRREREAELGARALEFTNIYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRDNSGH 229
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
SR FGFV +E E A+KAV NGKEV G++LY GRAQK+ ER ELKRRFE +K +RL
Sbjct: 230 SRCFGFVNFEKHEEAQKAVVHMNGKEVSGRLLYAGRAQKRVERQNELKRRFEQMKQDRLR 289
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLYVKNLDDSIDD++LRKEF+P+G ITSAK
Sbjct: 290 RYQGVNLYVKNLDDSIDDDKLRKEFSPYGVITSAK 324
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 86/235 (36%), Positives = 136/235 (57%), Gaps = 22/235 (9%)
Query: 77 TERALDTMNFDALKGRPIRI--MWSQRDPSLRKSGVG-------NVFIKNLDKSIDNKAM 127
++A++TMN L R + + S+R+ R++ +G N+++KNL +D + +
Sbjct: 151 AQQAINTMNGMLLNDRKVFVGHFKSRRE---REAELGARALEFTNIYVKNLPVDVDEQGL 207
Query: 128 YDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFI 187
D FS FG +LS KV +D G+S+ +GFV+FE E A K++ +NG ++ ++++ G+
Sbjct: 208 QDLFSQFGKMLSVKVMRDNSGHSRCFGFVNFEKHEEAQKAVVHMNGKEVSGRLLYAGRAQ 267
Query: 188 PRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMN 237
R ER+ EL + + N+Y+KN + +D+KL++ F PYG ITS +VM
Sbjct: 268 KRVERQNELKRRFEQMKQDRLRRYQGVNLYVKNLDDSIDDDKLRKEFSPYGVITSAKVMT 327
Query: 238 NDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRF 292
G S+GFGFV + SPE A KAV NG+ V K LYV AQ+K ER L ++
Sbjct: 328 EGGHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEERKAILTNQY 382
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 120/228 (52%), Gaps = 17/228 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQD-EQGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + +Y+ FS G ILS +V +D S GY +++F+ A +++
Sbjct: 10 LASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERAL 69
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N +L + + + +++ G + N++IKN + +++ L + F +G
Sbjct: 70 DTMNFEMLKGQPIRI------MWSQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFG 123
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S +V ++ SRGFGFV +E+ E A++A+ NG ++ + ++VG + + ER EL
Sbjct: 124 NILSCKVACDEHGSRGFGFVHFETHEAAQQAINTMNGMLLNDRKVFVGHFKSRREREAEL 183
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
R + N+YVKNL +D++ L+ F+ FG + S K
Sbjct: 184 GAR----------ALEFTNIYVKNLPVDVDEQGLQDLFSQFGKMLSVK 221
>gi|157818977|ref|NP_001099678.1| poly(A) binding protein, cytoplasmic 6 [Rattus norvegicus]
gi|149027506|gb|EDL83096.1| similar to RIKEN cDNA 4932702K14 (predicted) [Rattus norvegicus]
gi|197246058|gb|AAI68959.1| Poly(A) binding protein, cytoplasmic 3 [Rattus norvegicus]
Length = 643
Score = 365 bits (937), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 177/272 (65%), Positives = 216/272 (79%), Gaps = 12/272 (4%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D ERALDTMNFD +KG+P+RIMWSQRDPSLRKSGVGN+F+KNLD+SID+K +YDTFSAFG
Sbjct: 64 DAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFVKNLDRSIDSKTLYDTFSAFG 123
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCKV DE G SKGYGFVHFET+E A ++IEK+NGM LN + VFVG+F R++R+ E
Sbjct: 124 NILSCKVVCDENG-SKGYGFVHFETQEEAERAIEKMNGMFLNDRKVFVGRFKSRRDRQAE 182
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPE 254
LG +AK FTNVYIKN GED +DE+L+++F +G S +VM ++ GKS+GFGFV++E E
Sbjct: 183 LGARAKEFTNVYIKNLGEDMDDERLQDLFSRFGPALSVKVMTDESGKSKGFGFVSFERHE 242
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRF----------EMLKIERLNRYQ 304
A KAV NGK+++GK +YVGRAQKK ER ELK +F E + +R R Q
Sbjct: 243 DARKAVDEMNGKDLNGKQIYVGRAQKKVERQTELKHKFGQMKQDKPKIEQVPQDRSVRCQ 302
Query: 305 GVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
GVNLYVKNLDD IDDERLRKEF+PFGTITSAK
Sbjct: 303 GVNLYVKNLDDGIDDERLRKEFSPFGTITSAK 334
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 96/246 (39%), Positives = 138/246 (56%), Gaps = 32/246 (13%)
Query: 76 DTERALDTMNFDALKGRPIRI--MWSQRDPSLRKSGVG-------NVFIKNLDKSIDNKA 126
+ ERA++ MN L R + + S+RD R++ +G NV+IKNL + +D++
Sbjct: 150 EAERAIEKMNGMFLNDRKVFVGRFKSRRD---RQAELGARAKEFTNVYIKNLGEDMDDER 206
Query: 127 MYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKF 186
+ D FS FG LS KV DE G SKG+GFV FE E A K+++++NG LN K ++VG+
Sbjct: 207 LQDLFSRFGPALSVKVMTDESGKSKGFGFVSFERHEDARKAVDEMNGKDLNGKQIYVGRA 266
Query: 187 IPRKEREKELGEKAKLF--------------------TNVYIKNFGEDFNDEKLKEMFEP 226
+ ER+ EL K N+Y+KN + +DE+L++ F P
Sbjct: 267 QKKVERQTELKHKFGQMKQDKPKIEQVPQDRSVRCQGVNLYVKNLDDGIDDERLRKEFSP 326
Query: 227 YGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQ 286
+GTITS +V G+S+GFGFV + SPE A KAV NG+ V K LYV AQ+K ER
Sbjct: 327 FGTITSAKVTMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQA 386
Query: 287 ELKRRF 292
L ++
Sbjct: 387 HLSNQY 392
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 125/236 (52%), Gaps = 17/236 (7%)
Query: 102 DPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQG-NSKGYGFVHFET 160
+PS + ++++ +L + +Y+ FS G ILS +V +D S GY V+F+
Sbjct: 2 NPSDPSYSLASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVYRDRTTRRSLGYASVNFQQ 61
Query: 161 EEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKL 220
E A ++++ +N ++ K V I +R+ L + N+++KN + + L
Sbjct: 62 LEDAERALDTMNFDVIKGKPV----RIMWSQRDPSLRKSG--VGNIFVKNLDRSIDSKTL 115
Query: 221 KEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
+ F +G I S +V+ ++ S+G+GFV +E+ E AE+A++ NG ++ + ++VGR +
Sbjct: 116 YDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEEAERAIEKMNGMFLNDRKVFVGRFKS 175
Query: 281 KAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ +R EL R + N+Y+KNL + +DDERL+ F+ FG S K
Sbjct: 176 RRDRQAELGARAKEF----------TNVYIKNLGEDMDDERLQDLFSRFGPALSVK 221
>gi|301763992|ref|XP_002917400.1| PREDICTED: polyadenylate-binding protein 1-like [Ailuropoda
melanoleuca]
Length = 611
Score = 365 bits (937), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 175/275 (63%), Positives = 216/275 (78%), Gaps = 4/275 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G + QP D ERALDTMNF+ +KG+P+RIMWSQRDP LRKSGVGN+FIKNL+ SI
Sbjct: 53 GYAYINFQQP--ADAERALDTMNFEVIKGQPVRIMWSQRDPGLRKSGVGNIFIKNLEDSI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFS FG+ILSCKV D+ G S+G+GFVHFET EAA+++I +NGMLLN + VF
Sbjct: 111 DNKALYDTFSTFGNILSCKVVCDDHG-SRGFGFVHFETHEAAHQAIATMNGMLLNDRKVF 169
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GK 241
VG F R+ERE ELG +A FTN+Y+KN D +++ L+++F +G + S +VM +D G
Sbjct: 170 VGHFKSRREREAELGARAMEFTNIYVKNLHVDVDEQGLQDLFSQFGKMLSVKVMRDDIGH 229
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
SRGFGFV +E E A+KAV NGKEV G++LYVGRAQK+ ER ELKRRFE +K +R
Sbjct: 230 SRGFGFVNFEKHEEAQKAVMDMNGKEVSGRLLYVGRAQKRVERQNELKRRFEQMKQDRAT 289
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLYVKNLDDSIDDE+LRKEF+P+G ITSAK
Sbjct: 290 RYQGVNLYVKNLDDSIDDEKLRKEFSPYGVITSAK 324
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 79/191 (41%), Positives = 118/191 (61%), Gaps = 10/191 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
N+++KNL +D + + D FS FG +LS KV +D+ G+S+G+GFV+FE E A K++ +
Sbjct: 192 NIYVKNLHVDVDEQGLQDLFSQFGKMLSVKVMRDDIGHSRGFGFVNFEKHEEAQKAVMDM 251
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKLK 221
NG ++ ++++VG+ R ER+ EL + + N+Y+KN + +DEKL+
Sbjct: 252 NGKEVSGRLLYVGRAQKRVERQNELKRRFEQMKQDRATRYQGVNLYVKNLDDSIDDEKLR 311
Query: 222 EMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKK 281
+ F PYG ITS +VM G S+GFGFV + SPE A KAV NG+ V K LYV AQ+K
Sbjct: 312 KEFSPYGVITSAKVMTEGGHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRK 371
Query: 282 AERTQELKRRF 292
ER L ++
Sbjct: 372 EERKAILTNQY 382
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 120/228 (52%), Gaps = 17/228 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQD-EQGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + +Y+ FS G ILS +V +D S GY +++F+ A +++
Sbjct: 10 LASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERAL 69
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N ++ + V + +++ G + N++IKN + +++ L + F +G
Sbjct: 70 DTMNFEVIKGQPVRI------MWSQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFG 123
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S +V+ +D SRGFGFV +E+ E A +A+ NG ++ + ++VG + + ER EL
Sbjct: 124 NILSCKVVCDDHGSRGFGFVHFETHEAAHQAIATMNGMLLNDRKVFVGHFKSRREREAEL 183
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
R + N+YVKNL +D++ L+ F+ FG + S K
Sbjct: 184 GAR----------AMEFTNIYVKNLHVDVDEQGLQDLFSQFGKMLSVK 221
>gi|395545876|ref|XP_003774823.1| PREDICTED: polyadenylate-binding protein 1-like [Sarcophilus
harrisii]
Length = 621
Score = 365 bits (936), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 173/262 (66%), Positives = 216/262 (82%), Gaps = 2/262 (0%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D +R L+TMN D +KG+P+RIMWSQRDPSLRKSGVGN+F+KNL+KSIDN+A++D FS FG
Sbjct: 55 DAQRVLETMNLDVIKGKPVRIMWSQRDPSLRKSGVGNIFVKNLEKSIDNRALFDAFSGFG 114
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCKV DE G SKGYGFVHFET+E+A K+IEK+NG++L S VFVG F RKERE E
Sbjct: 115 NILSCKVVSDENG-SKGYGFVHFETQESAEKAIEKMNGIVLKSLKVFVGHFKSRKERELE 173
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPE 254
LG +A+ FTNVYIKNFGED ++ +L E+F +G S +VM ++ G+S+GFGFV+Y + E
Sbjct: 174 LGARAREFTNVYIKNFGEDMDNARLGEIFGRFGRALSVKVMTDERGRSKGFGFVSYATHE 233
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A++AV NGKE++G+ +YVGRAQKK ER ELKR FE +K +R+ RYQGVNLYVKNLD
Sbjct: 234 DAQRAVDEMNGKELNGRRIYVGRAQKKGERQTELKRHFEQIKQDRVTRYQGVNLYVKNLD 293
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
D+IDDERLR EF+PFGTITSAK
Sbjct: 294 DTIDDERLRTEFSPFGTITSAK 315
Score = 157 bits (396), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 87/242 (35%), Positives = 132/242 (54%), Gaps = 17/242 (7%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV+IKN + +DN + + F FG LS KV DE+G SKG+GFV + T E A ++++++
Sbjct: 183 NVYIKNFGEDMDNARLGEIFGRFGRALSVKVMTDERGRSKGFGFVSYATHEDAQRAVDEM 242
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKLK 221
NG LN + ++VG+ + ER+ EL + N+Y+KN + +DE+L+
Sbjct: 243 NGKELNGRRIYVGRAQKKGERQTELKRHFEQIKQDRVTRYQGVNLYVKNLDDTIDDERLR 302
Query: 222 EMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKK 281
F P+GTITS +VM G SRGFGFV + +P+ A KAV NGK V K LYV AQ+K
Sbjct: 303 TEFSPFGTITSAKVMMEGGHSRGFGFVCFSAPDEAAKAVTEMNGKLVTSKPLYVALAQRK 362
Query: 282 AERTQELKRRF--EMLKIER-----LNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITS 334
ER L ++ M I+ LN Y + + ++ + R + P+G +
Sbjct: 363 EERQAHLTNQYMRRMANIQTFANPVLNPYHQPTSSSRYIMTTVPSSQTRTSYYPYGQVPQ 422
Query: 335 AK 336
+
Sbjct: 423 LR 424
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 118/228 (51%), Gaps = 17/228 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + +Y+ FS G ILS +V +D +S GY +V+F+ A + +
Sbjct: 1 MASLYVGDLHHDVTEAMLYEKFSPAGPILSIRVCRDMITRSSLGYAYVNFQQSSDAQRVL 60
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
E +N ++ K V I +R+ L + N+++KN + ++ L + F +G
Sbjct: 61 ETMNLDVIKGKPV----RIMWSQRDPSLRKSG--VGNIFVKNLEKSIDNRALFDAFSGFG 114
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S +V++++ S+G+GFV +E+ E AEKA++ NG + ++VG + + ER EL
Sbjct: 115 NILSCKVVSDENGSKGYGFVHFETQESAEKAIEKMNGIVLKSLKVFVGHFKSRKERELEL 174
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
R + N+Y+KN + +D+ RL + F FG S K
Sbjct: 175 GARAR----------EFTNVYIKNFGEDMDNARLGEIFGRFGRALSVK 212
>gi|255652857|ref|NP_001157308.1| poly(A) binding protein, cytoplasmic 3 [Mus musculus]
gi|12855391|dbj|BAB30319.1| unnamed protein product [Mus musculus]
gi|26325704|dbj|BAC26606.1| unnamed protein product [Mus musculus]
Length = 643
Score = 364 bits (935), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 178/272 (65%), Positives = 218/272 (80%), Gaps = 12/272 (4%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D ERALDTMNFD +KG+P+RIMWSQRDPSLRKSGVGN+F+KNLD+SID+K +YDTFSAFG
Sbjct: 64 DAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFVKNLDRSIDSKTLYDTFSAFG 123
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCKV DE G SKGYGFVHFET+E A ++IEK+NGM LN VFVG+F R++R+ E
Sbjct: 124 NILSCKVVCDENG-SKGYGFVHFETQEEAERAIEKMNGMFLNDHKVFVGRFKSRRDRQAE 182
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPE 254
LG +AK FTNVYIKN GED +DE+L+++F +G S +VM ++ GKS+GFGFV++E E
Sbjct: 183 LGARAKEFTNVYIKNLGEDMDDERLQDLFGRFGPALSVKVMTDESGKSKGFGFVSFERHE 242
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEML-----KIERLN-----RYQ 304
A KAV+ NGK+++GK +YVGRAQKK ER ELK +F + KIER+ R +
Sbjct: 243 DARKAVEEMNGKDLNGKQIYVGRAQKKVERQTELKHKFGQMKQDKHKIERVPQDRSVRCK 302
Query: 305 GVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
GVNLYVKNLDD IDDERLRKEF+PFGTITSAK
Sbjct: 303 GVNLYVKNLDDGIDDERLRKEFSPFGTITSAK 334
Score = 157 bits (397), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 96/246 (39%), Positives = 136/246 (55%), Gaps = 32/246 (13%)
Query: 76 DTERALDTMNFDALKGRPIRI--MWSQRDPSLRKSGVG-------NVFIKNLDKSIDNKA 126
+ ERA++ MN L + + S+RD R++ +G NV+IKNL + +D++
Sbjct: 150 EAERAIEKMNGMFLNDHKVFVGRFKSRRD---RQAELGARAKEFTNVYIKNLGEDMDDER 206
Query: 127 MYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKF 186
+ D F FG LS KV DE G SKG+GFV FE E A K++E++NG LN K ++VG+
Sbjct: 207 LQDLFGRFGPALSVKVMTDESGKSKGFGFVSFERHEDARKAVEEMNGKDLNGKQIYVGRA 266
Query: 187 IPRKEREKELGEKAKLF--------------------TNVYIKNFGEDFNDEKLKEMFEP 226
+ ER+ EL K N+Y+KN + +DE+L++ F P
Sbjct: 267 QKKVERQTELKHKFGQMKQDKHKIERVPQDRSVRCKGVNLYVKNLDDGIDDERLRKEFSP 326
Query: 227 YGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQ 286
+GTITS +V G+S+GFGFV + SPE A KAV NGK V K LYV AQ+K ER
Sbjct: 327 FGTITSAKVTMEGGRSKGFGFVCFSSPEEATKAVTEMNGKIVATKPLYVALAQRKEERQA 386
Query: 287 ELKRRF 292
L ++
Sbjct: 387 HLSNQY 392
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 123/236 (52%), Gaps = 17/236 (7%)
Query: 102 DPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFET 160
+PS + ++++ +L + +Y+ FS G ILS +V +D S GY V+F+
Sbjct: 2 NPSDPSYSLASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVYRDRITRRSLGYASVNFQQ 61
Query: 161 EEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKL 220
E A ++++ +N ++ K V I +R+ L + N+++KN + + L
Sbjct: 62 LEDAERALDTMNFDVIKGKPV----RIMWSQRDPSLRKSG--VGNIFVKNLDRSIDSKTL 115
Query: 221 KEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
+ F +G I S +V+ ++ S+G+GFV +E+ E AE+A++ NG ++ ++VGR +
Sbjct: 116 YDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEEAERAIEKMNGMFLNDHKVFVGRFKS 175
Query: 281 KAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ +R EL R + N+Y+KNL + +DDERL+ F FG S K
Sbjct: 176 RRDRQAELGARAKEF----------TNVYIKNLGEDMDDERLQDLFGRFGPALSVK 221
>gi|119596296|gb|EAW75890.1| hCG2019100, isoform CRA_d [Homo sapiens]
Length = 639
Score = 364 bits (935), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 177/275 (64%), Positives = 215/275 (78%), Gaps = 4/275 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G + QP D ERALDTMNF+ LKG+PIRIMWSQRDP LRKSGVGN+FIKNL+ SI
Sbjct: 53 GYAYINFQQP--ADAERALDTMNFEMLKGQPIRIMWSQRDPGLRKSGVGNIFIKNLEDSI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFS FG+ILSCKVA DE G S+G+GFVHFET EAA ++I +NGMLLN + VF
Sbjct: 111 DNKALYDTFSTFGNILSCKVACDEHG-SRGFGFVHFETHEAAQQAINTMNGMLLNDRKVF 169
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGK 241
VG F R+ERE ELG +A FTN+Y+KN D +++ L+++F +G + S +VM +N G
Sbjct: 170 VGHFKSRREREAELGARALEFTNIYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRDNSGH 229
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
SR FGFV +E E A+KAV NGKEV G++LY GRAQK+ ER ELKRRFE +K +RL
Sbjct: 230 SRCFGFVNFEKHEEAQKAVVHMNGKEVSGRLLYAGRAQKRVERQNELKRRFEQMKQDRLR 289
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLYVKNLDDSIDD++LRKEF+P+G ITSAK
Sbjct: 290 RYQGVNLYVKNLDDSIDDDKLRKEFSPYGVITSAK 324
Score = 151 bits (382), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 86/234 (36%), Positives = 136/234 (58%), Gaps = 22/234 (9%)
Query: 78 ERALDTMNFDALKGRPIRI--MWSQRDPSLRKSGVG-------NVFIKNLDKSIDNKAMY 128
++A++TMN L R + + S+R+ R++ +G N+++KNL +D + +
Sbjct: 152 QQAINTMNGMLLNDRKVFVGHFKSRRE---REAELGARALEFTNIYVKNLPVDVDEQGLQ 208
Query: 129 DTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIP 188
D FS FG +LS KV +D G+S+ +GFV+FE E A K++ +NG ++ ++++ G+
Sbjct: 209 DLFSQFGKMLSVKVMRDNSGHSRCFGFVNFEKHEEAQKAVVHMNGKEVSGRLLYAGRAQK 268
Query: 189 RKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN 238
R ER+ EL + + N+Y+KN + +D+KL++ F PYG ITS +VM
Sbjct: 269 RVERQNELKRRFEQMKQDRLRRYQGVNLYVKNLDDSIDDDKLRKEFSPYGVITSAKVMTE 328
Query: 239 DGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRF 292
G S+GFGFV + SPE A KAV NG+ V K LYV AQ+K ER L ++
Sbjct: 329 GGHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEERKAILTNQY 382
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 120/228 (52%), Gaps = 17/228 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQD-EQGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + +Y+ FS G ILS +V +D S GY +++F+ A +++
Sbjct: 10 LASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERAL 69
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N +L + + + +++ G + N++IKN + +++ L + F +G
Sbjct: 70 DTMNFEMLKGQPIRI------MWSQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFG 123
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S +V ++ SRGFGFV +E+ E A++A+ NG ++ + ++VG + + ER EL
Sbjct: 124 NILSCKVACDEHGSRGFGFVHFETHEAAQQAINTMNGMLLNDRKVFVGHFKSRREREAEL 183
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
R + N+YVKNL +D++ L+ F+ FG + S K
Sbjct: 184 GAR----------ALEFTNIYVKNLPVDVDEQGLQDLFSQFGKMLSVK 221
>gi|148670144|gb|EDL02091.1| RIKEN cDNA 4932702K14 [Mus musculus]
Length = 642
Score = 364 bits (935), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 178/272 (65%), Positives = 218/272 (80%), Gaps = 12/272 (4%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D ERALDTMNFD +KG+P+RIMWSQRDPSLRKSGVGN+F+KNLD+SID+K +YDTFSAFG
Sbjct: 64 DAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFVKNLDRSIDSKTLYDTFSAFG 123
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCKV DE G SKGYGFVHFET+E A ++IEK+NGM LN VFVG+F R++R+ E
Sbjct: 124 NILSCKVVCDENG-SKGYGFVHFETQEEAERAIEKMNGMFLNDHKVFVGRFKSRRDRQAE 182
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPE 254
LG +AK FTNVYIKN GED +DE+L+++F +G S +VM ++ GKS+GFGFV++E E
Sbjct: 183 LGARAKEFTNVYIKNLGEDMDDERLQDLFGRFGPALSVKVMTDESGKSKGFGFVSFERHE 242
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEML-----KIERLN-----RYQ 304
A KAV+ NGK+++GK +YVGRAQKK ER ELK +F + KIER+ R +
Sbjct: 243 DARKAVEEMNGKDLNGKQIYVGRAQKKVERQTELKHKFGQMKQDKHKIERVPQDRSVRCK 302
Query: 305 GVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
GVNLYVKNLDD IDDERLRKEF+PFGTITSAK
Sbjct: 303 GVNLYVKNLDDGIDDERLRKEFSPFGTITSAK 334
Score = 157 bits (397), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 96/246 (39%), Positives = 136/246 (55%), Gaps = 32/246 (13%)
Query: 76 DTERALDTMNFDALKGRPIRI--MWSQRDPSLRKSGVG-------NVFIKNLDKSIDNKA 126
+ ERA++ MN L + + S+RD R++ +G NV+IKNL + +D++
Sbjct: 150 EAERAIEKMNGMFLNDHKVFVGRFKSRRD---RQAELGARAKEFTNVYIKNLGEDMDDER 206
Query: 127 MYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKF 186
+ D F FG LS KV DE G SKG+GFV FE E A K++E++NG LN K ++VG+
Sbjct: 207 LQDLFGRFGPALSVKVMTDESGKSKGFGFVSFERHEDARKAVEEMNGKDLNGKQIYVGRA 266
Query: 187 IPRKEREKELGEKAKLF--------------------TNVYIKNFGEDFNDEKLKEMFEP 226
+ ER+ EL K N+Y+KN + +DE+L++ F P
Sbjct: 267 QKKVERQTELKHKFGQMKQDKHKIERVPQDRSVRCKGVNLYVKNLDDGIDDERLRKEFSP 326
Query: 227 YGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQ 286
+GTITS +V G+S+GFGFV + SPE A KAV NGK V K LYV AQ+K ER
Sbjct: 327 FGTITSAKVTMEGGRSKGFGFVCFSSPEEATKAVTEMNGKIVATKPLYVALAQRKEERQA 386
Query: 287 ELKRRF 292
L ++
Sbjct: 387 HLSNQY 392
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 123/236 (52%), Gaps = 17/236 (7%)
Query: 102 DPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFET 160
+PS + ++++ +L + +Y+ FS G ILS +V +D S GY V+F+
Sbjct: 2 NPSDPSYSLASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVYRDRITRRSLGYASVNFQQ 61
Query: 161 EEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKL 220
E A ++++ +N ++ K V I +R+ L + N+++KN + + L
Sbjct: 62 LEDAERALDTMNFDVIKGKPV----RIMWSQRDPSLRKSG--VGNIFVKNLDRSIDSKTL 115
Query: 221 KEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
+ F +G I S +V+ ++ S+G+GFV +E+ E AE+A++ NG ++ ++VGR +
Sbjct: 116 YDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEEAERAIEKMNGMFLNDHKVFVGRFKS 175
Query: 281 KAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ +R EL R + N+Y+KNL + +DDERL+ F FG S K
Sbjct: 176 RRDRQAELGARAKEF----------TNVYIKNLGEDMDDERLQDLFGRFGPALSVK 221
>gi|308499747|ref|XP_003112059.1| CRE-PAB-1 protein [Caenorhabditis remanei]
gi|308268540|gb|EFP12493.1| CRE-PAB-1 protein [Caenorhabditis remanei]
Length = 695
Score = 364 bits (934), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 176/277 (63%), Positives = 217/277 (78%), Gaps = 13/277 (4%)
Query: 73 YMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFS 132
+++ ERA+DTMNF+AL G+P+RIMWSQRDP++R+SG GN+FIKNLDK IDNK++YDTFS
Sbjct: 98 FLITAERAMDTMNFEALHGKPMRIMWSQRDPAMRRSGAGNIFIKNLDKVIDNKSIYDTFS 157
Query: 133 AFGSILSCKV-----------AQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIV 181
FG+ILSCKV A D++G+SKGYGFVHFETEEAA +I+KVNGMLL K V
Sbjct: 158 LFGNILSCKVTFPIEHLKTVVAIDDEGSSKGYGFVHFETEEAAQNAIQKVNGMLLAGKKV 217
Query: 182 FVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDGK 241
FVGKF PR +R +ELGE AK FTNVY+KNFG+ +N E L+++F YG ITS VM +DGK
Sbjct: 218 FVGKFQPRAQRNRELGETAKKFTNVYVKNFGDHYNKETLEKLFAKYGAITSCDVMTSDGK 277
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGK--ILYVGRAQKKAERTQELKRRFEMLKIER 299
S+GFGFVA+ PE AE AVQA N VDG L+V RAQKK+ER ELK++ E K+ER
Sbjct: 278 SKGFGFVAFAQPEEAEAAVQALNDSAVDGSDLKLHVCRAQKKSERHAELKKKHEQHKVER 337
Query: 300 LNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ +YQGVNLYVKNLD+S+DDE L+K+F FG ITSAK
Sbjct: 338 MQKYQGVNLYVKNLDESVDDEALKKQFENFGNITSAK 374
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 107/208 (51%), Gaps = 28/208 (13%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV++KN + + + F+ +G+I SC V + G SKG+GFV F E A +++ +
Sbjct: 241 NVYVKNFGDHYNKETLEKLFAKYGAITSCDVMTSD-GKSKGFGFVAFAQPEEAEAAVQAL 299
Query: 172 NGMLLNSK--IVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEK 219
N ++ + V + + ER EL +K + N+Y+KN E +DE
Sbjct: 300 NDSAVDGSDLKLHVCRAQKKSERHAELKKKHEQHKVERMQKYQGVNLYVKNLDESVDDEA 359
Query: 220 LKEMFEPYGTITS--------------YRVMNND-GKSRGFGFVAYESPEFAEKAVQAWN 264
LK+ FE +G ITS ++VM ++ G+S+GFGFV +E PE A AV N
Sbjct: 360 LKKQFENFGNITSAKVGLVPLEFFISLFQVMTDENGRSKGFGFVCFEKPEEATTAVTEMN 419
Query: 265 GKEVDGKILYVGRAQKKAERTQELKRRF 292
K V K LYV AQ+K +R +L ++
Sbjct: 420 SKMVCSKPLYVALAQRKEDRRAQLASQY 447
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 129/264 (48%), Gaps = 45/264 (17%)
Query: 101 RDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGN-SKGYGFVHFE 159
++P+ + ++++ +L ++ +++ FSA G +LS +V +D S GY +V+F+
Sbjct: 22 QNPTGSSYTMASLYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQ 81
Query: 160 TEE----------------AANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLF 203
A ++++ +N L+ K + I +R+ +
Sbjct: 82 QPADGKSFFQFMSFLTFLITAERAMDTMNFEALHGKPM----RIMWSQRDPAMRRSGA-- 135
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRV------------MNNDGKSRGFGFVAYE 251
N++IKN + +++ + + F +G I S +V ++++G S+G+GFV +E
Sbjct: 136 GNIFIKNLDKVIDNKSIYDTFSLFGNILSCKVTFPIEHLKTVVAIDDEGSSKGYGFVHFE 195
Query: 252 SPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVK 311
+ E A+ A+Q NG + GK ++VG+ Q +A+R +EL E ++ N+YVK
Sbjct: 196 TEEAAQNAIQKVNGMLLAGKKVFVGKFQPRAQRNRELG--------ETAKKF--TNVYVK 245
Query: 312 NLDDSIDDERLRKEFTPFGTITSA 335
N D + E L K F +G ITS
Sbjct: 246 NFGDHYNKETLEKLFAKYGAITSC 269
>gi|119596297|gb|EAW75891.1| hCG2019100, isoform CRA_e [Homo sapiens]
Length = 617
Score = 363 bits (933), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 177/275 (64%), Positives = 215/275 (78%), Gaps = 4/275 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G + QP D ERALDTMNF+ LKG+PIRIMWSQRDP LRKSGVGN+FIKNL+ SI
Sbjct: 53 GYAYINFQQP--ADAERALDTMNFEMLKGQPIRIMWSQRDPGLRKSGVGNIFIKNLEDSI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFS FG+ILSCKVA DE G S+G+GFVHFET EAA ++I +NGMLLN + VF
Sbjct: 111 DNKALYDTFSTFGNILSCKVACDEHG-SRGFGFVHFETHEAAQQAINTMNGMLLNDRKVF 169
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGK 241
VG F R+ERE ELG +A FTN+Y+KN D +++ L+++F +G + S +VM +N G
Sbjct: 170 VGHFKSRREREAELGARALEFTNIYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRDNSGH 229
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
SR FGFV +E E A+KAV NGKEV G++LY GRAQK+ ER ELKRRFE +K +RL
Sbjct: 230 SRCFGFVNFEKHEEAQKAVVHMNGKEVSGRLLYAGRAQKRVERQNELKRRFEQMKQDRLR 289
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLYVKNLDDSIDD++LRKEF+P+G ITSAK
Sbjct: 290 RYQGVNLYVKNLDDSIDDDKLRKEFSPYGVITSAK 324
Score = 151 bits (382), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 86/235 (36%), Positives = 136/235 (57%), Gaps = 22/235 (9%)
Query: 77 TERALDTMNFDALKGRPIRI--MWSQRDPSLRKSGVG-------NVFIKNLDKSIDNKAM 127
++A++TMN L R + + S+R+ R++ +G N+++KNL +D + +
Sbjct: 151 AQQAINTMNGMLLNDRKVFVGHFKSRRE---REAELGARALEFTNIYVKNLPVDVDEQGL 207
Query: 128 YDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFI 187
D FS FG +LS KV +D G+S+ +GFV+FE E A K++ +NG ++ ++++ G+
Sbjct: 208 QDLFSQFGKMLSVKVMRDNSGHSRCFGFVNFEKHEEAQKAVVHMNGKEVSGRLLYAGRAQ 267
Query: 188 PRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMN 237
R ER+ EL + + N+Y+KN + +D+KL++ F PYG ITS +VM
Sbjct: 268 KRVERQNELKRRFEQMKQDRLRRYQGVNLYVKNLDDSIDDDKLRKEFSPYGVITSAKVMT 327
Query: 238 NDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRF 292
G S+GFGFV + SPE A KAV NG+ V K LYV AQ+K ER L ++
Sbjct: 328 EGGHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEERKAILTNQY 382
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 120/228 (52%), Gaps = 17/228 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQD-EQGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + +Y+ FS G ILS +V +D S GY +++F+ A +++
Sbjct: 10 LASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERAL 69
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N +L + + + +++ G + N++IKN + +++ L + F +G
Sbjct: 70 DTMNFEMLKGQPIRI------MWSQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFG 123
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S +V ++ SRGFGFV +E+ E A++A+ NG ++ + ++VG + + ER EL
Sbjct: 124 NILSCKVACDEHGSRGFGFVHFETHEAAQQAINTMNGMLLNDRKVFVGHFKSRREREAEL 183
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
R + N+YVKNL +D++ L+ F+ FG + S K
Sbjct: 184 GAR----------ALEFTNIYVKNLPVDVDEQGLQDLFSQFGKMLSVK 221
>gi|405973173|gb|EKC37903.1| Polyadenylate-binding protein 4 [Crassostrea gigas]
Length = 465
Score = 363 bits (933), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 185/276 (67%), Positives = 218/276 (78%), Gaps = 5/276 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD +KGRPIRI W QRDPSLRKSGVGNVFIK LDKSI
Sbjct: 52 GYAYVNFHQP--ADAERALDTMNFDIIKGRPIRITWYQRDPSLRKSGVGNVFIKKLDKSI 109
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFSAFG+I SCK+ DE G S+GYGFVHFET+EAA +IEKVNGMLLN K VF
Sbjct: 110 DNKALYDTFSAFGNISSCKIVCDEHG-SRGYGFVHFETDEAARIAIEKVNGMLLNGKKVF 168
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDG-- 240
VG+F+ R+ER + L + F NVY+KN E+ +DEKL+E+FE YG I S +VM +D
Sbjct: 169 VGRFMSRRERLEVLDLGMRKFNNVYVKNLSEETDDEKLREIFELYGKIISAKVMIDDSSR 228
Query: 241 KSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERL 300
KS+ FGFV++E+PE A+KAV+A NG + GKILYVGRAQ K ER ELK +FE ++ ER+
Sbjct: 229 KSKQFGFVSFENPEAAKKAVEALNGNDNAGKILYVGRAQTKIERQAELKEKFERIRKERI 288
Query: 301 NRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
NRYQGVNL+VKNLDD+IDD+RLRKEF FGTITSAK
Sbjct: 289 NRYQGVNLFVKNLDDNIDDKRLRKEFAQFGTITSAK 324
Score = 134 bits (336), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 78/210 (37%), Positives = 125/210 (59%), Gaps = 17/210 (8%)
Query: 102 DPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGN-SKGYGFVHFET 160
D +RK NV++KNL + D++ + + F +G I+S KV D+ SK +GFV FE
Sbjct: 183 DLGMRK--FNNVYVKNLSEETDDEKLREIFELYGKIISAKVMIDDSSRKSKQFGFVSFEN 240
Query: 161 EEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKN 210
EAA K++E +NG KI++VG+ + ER+ EL EK + N+++KN
Sbjct: 241 PEAAKKAVEALNGNDNAGKILYVGRAQTKIERQAELKEKFERIRKERINRYQGVNLFVKN 300
Query: 211 FGEDFNDEKLKEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDG 270
++ +D++L++ F +GTITS +VM +G+S+GFGFV + SPE A KA+ N K ++
Sbjct: 301 LDDNIDDKRLRKEFAQFGTITSAKVMTENGRSKGFGFVYFSSPEEATKAIVEMNEKIIEA 360
Query: 271 KILYVGRAQKKAERTQELKRRFEMLKIERL 300
+ LYV AQ+K +R K +L ++R+
Sbjct: 361 RPLYVALAQRKEDR----KAYLALLNMQRI 386
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 125/229 (54%), Gaps = 17/229 (7%)
Query: 109 GVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKS 167
V ++++++L + ++ FS G +LS +V +D S GY +V+F A ++
Sbjct: 8 AVASLYVRDLHPDVTEDMLFKKFSTAGPVLSVRVCRDMITRRSLGYAYVNFHQPADAERA 67
Query: 168 IEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPY 227
++ +N ++ + + + + +R+ L + NV+IK + +++ L + F +
Sbjct: 68 LDTMNFDIIKGRPIRITWY----QRDPSLRKSG--VGNVFIKKLDKSIDNKALYDTFSAF 121
Query: 228 GTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQE 287
G I+S +++ ++ SRG+GFV +E+ E A A++ NG ++GK ++VGR + ER +
Sbjct: 122 GNISSCKIVCDEHGSRGYGFVHFETDEAARIAIEKVNGMLLNGKKVFVGRFMSRRERLEV 181
Query: 288 LKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
L L + + N N+YVKNL + DDE+LR+ F +G I SAK
Sbjct: 182 LD-----LGMRKFN-----NVYVKNLSEETDDEKLREIFELYGKIISAK 220
>gi|410953832|ref|XP_003983574.1| PREDICTED: polyadenylate-binding protein 1-like [Felis catus]
Length = 616
Score = 363 bits (932), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 175/275 (63%), Positives = 215/275 (78%), Gaps = 4/275 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G + QP D ERALDTMNF+ ++G+PIRIMWSQRDP LRKSGVGN+FIKNL+ SI
Sbjct: 53 GYAYINFQQP--ADAERALDTMNFEVIRGQPIRIMWSQRDPGLRKSGVGNIFIKNLEDSI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFS FG+ILSCKV D G S+G+GFVHFET EAA ++I +NGMLLN + VF
Sbjct: 111 DNKALYDTFSTFGNILSCKVVCDNHG-SRGFGFVHFETHEAAQQAIVTMNGMLLNDRKVF 169
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GK 241
VG F R+ERE ELG +A FTN+Y+KN D +++ L+++F +G + S +VM +D G
Sbjct: 170 VGHFKSRREREAELGARAMEFTNIYVKNLHVDVDEQGLQDLFSQFGKMLSVKVMRDDSGH 229
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
SRGFGFV +E E A+KAV NGKEV G++LYVGRAQK+ ER ELKRRFE +K +RL
Sbjct: 230 SRGFGFVNFEKHEEAQKAVTDMNGKEVRGRLLYVGRAQKRVERQNELKRRFEQMKQDRLT 289
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLYVKNLDDSIDDE+LR+EF+P+G ITSAK
Sbjct: 290 RYQGVNLYVKNLDDSIDDEKLRREFSPYGVITSAK 324
Score = 157 bits (397), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 79/191 (41%), Positives = 116/191 (60%), Gaps = 10/191 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
N+++KNL +D + + D FS FG +LS KV +D+ G+S+G+GFV+FE E A K++ +
Sbjct: 192 NIYVKNLHVDVDEQGLQDLFSQFGKMLSVKVMRDDSGHSRGFGFVNFEKHEEAQKAVTDM 251
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKLK 221
NG + ++++VG+ R ER+ EL + + N+Y+KN + +DEKL+
Sbjct: 252 NGKEVRGRLLYVGRAQKRVERQNELKRRFEQMKQDRLTRYQGVNLYVKNLDDSIDDEKLR 311
Query: 222 EMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKK 281
F PYG ITS +VM G S+GFGFV + SPE A KAV NG+ V K LYV AQ+K
Sbjct: 312 REFSPYGVITSAKVMTEGGHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRK 371
Query: 282 AERTQELKRRF 292
ER L ++
Sbjct: 372 EERKAILTNQY 382
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 121/228 (53%), Gaps = 17/228 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQD-EQGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + +Y+ FS G ILS +V +D S GY +++F+ A +++
Sbjct: 10 LASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERAL 69
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N ++ + + + +++ G + N++IKN + +++ L + F +G
Sbjct: 70 DTMNFEVIRGQPIRI------MWSQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFG 123
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S +V+ ++ SRGFGFV +E+ E A++A+ NG ++ + ++VG + + ER EL
Sbjct: 124 NILSCKVVCDNHGSRGFGFVHFETHEAAQQAIVTMNGMLLNDRKVFVGHFKSRREREAEL 183
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
R + N+YVKNL +D++ L+ F+ FG + S K
Sbjct: 184 GAR----------AMEFTNIYVKNLHVDVDEQGLQDLFSQFGKMLSVK 221
>gi|402882426|ref|XP_003904744.1| PREDICTED: polyadenylate-binding protein 1-like [Papio anubis]
Length = 614
Score = 363 bits (932), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 176/275 (64%), Positives = 214/275 (77%), Gaps = 4/275 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G + QP D ERALDTMNF+ LKG+PIRIMWSQRDP LRKSGVGN+FIKNL+ SI
Sbjct: 53 GYAYINFQQP--ADAERALDTMNFEMLKGQPIRIMWSQRDPGLRKSGVGNIFIKNLEDSI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFS FG+ILSCKV DE G S+G+GFVHFET EAA ++I +NGMLLN + VF
Sbjct: 111 DNKALYDTFSTFGNILSCKVVCDEHG-SRGFGFVHFETHEAAQQAINTMNGMLLNDRKVF 169
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGK 241
VG F R+ERE ELG +A FTN+Y+KN D +++ L+++F +G + S +VM +N G
Sbjct: 170 VGHFKSRREREAELGARALEFTNIYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRDNSGH 229
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
SR FGFV +E E A+KAV NGKEV G++LY GRAQK+ ER ELKRRFE +K +RL
Sbjct: 230 SRCFGFVNFEKHEEAQKAVVHMNGKEVSGRLLYAGRAQKRVERQNELKRRFEQMKQDRLR 289
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLYVKNLDDSIDD++LRKEF+P+G ITSAK
Sbjct: 290 RYQGVNLYVKNLDDSIDDDKLRKEFSPYGVITSAK 324
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 86/235 (36%), Positives = 136/235 (57%), Gaps = 22/235 (9%)
Query: 77 TERALDTMNFDALKGRPIRI--MWSQRDPSLRKSGVG-------NVFIKNLDKSIDNKAM 127
++A++TMN L R + + S+R+ R++ +G N+++KNL +D + +
Sbjct: 151 AQQAINTMNGMLLNDRKVFVGHFKSRRE---REAELGARALEFTNIYVKNLPVDVDEQGL 207
Query: 128 YDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFI 187
D FS FG +LS KV +D G+S+ +GFV+FE E A K++ +NG ++ ++++ G+
Sbjct: 208 QDLFSQFGKMLSVKVMRDNSGHSRCFGFVNFEKHEEAQKAVVHMNGKEVSGRLLYAGRAQ 267
Query: 188 PRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMN 237
R ER+ EL + + N+Y+KN + +D+KL++ F PYG ITS +VM
Sbjct: 268 KRVERQNELKRRFEQMKQDRLRRYQGVNLYVKNLDDSIDDDKLRKEFSPYGVITSAKVMT 327
Query: 238 NDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRF 292
G S+GFGFV + SPE A KAV NG+ V K LYV AQ+K ER L ++
Sbjct: 328 EGGHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEERKAILTNQY 382
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 121/228 (53%), Gaps = 17/228 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQD-EQGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + +Y+ FS G ILS +V +D S GY +++F+ A +++
Sbjct: 10 LASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERAL 69
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N +L G+ I +++ G + N++IKN + +++ L + F +G
Sbjct: 70 DTMNFEMLK------GQPIRIMWSQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFG 123
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S +V+ ++ SRGFGFV +E+ E A++A+ NG ++ + ++VG + + ER EL
Sbjct: 124 NILSCKVVCDEHGSRGFGFVHFETHEAAQQAINTMNGMLLNDRKVFVGHFKSRREREAEL 183
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
R + N+YVKNL +D++ L+ F+ FG + S K
Sbjct: 184 GAR----------ALEFTNIYVKNLPVDVDEQGLQDLFSQFGKMLSVK 221
>gi|355563109|gb|EHH19671.1| Polyadenylate-binding protein 1-like protein [Macaca mulatta]
Length = 614
Score = 363 bits (932), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 176/275 (64%), Positives = 214/275 (77%), Gaps = 4/275 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G + QP D ERALDTMNF+ LKG+PIRIMWSQRDP LRKSGVGN+FIKNL+ SI
Sbjct: 53 GYAYINFQQP--ADAERALDTMNFEMLKGQPIRIMWSQRDPGLRKSGVGNIFIKNLEDSI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFS FG+ILSCKV DE G S+G+GFVHFET EAA ++I +NGMLLN + VF
Sbjct: 111 DNKALYDTFSTFGNILSCKVVCDEHG-SRGFGFVHFETHEAAQQAINTMNGMLLNDRKVF 169
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGK 241
VG F R+ERE ELG +A FTN+Y+KN D +++ L+++F +G + S +VM +N G
Sbjct: 170 VGHFKSRREREAELGARALEFTNIYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRDNSGH 229
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
SR FGFV +E E A+KAV NGKEV G++LY GRAQK+ ER ELKRRFE +K +RL
Sbjct: 230 SRCFGFVNFEKHEEAQKAVVHMNGKEVSGRLLYAGRAQKRVERQNELKRRFEQMKQDRLR 289
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLYVKNLDDSIDD++LRKEF+P+G ITSAK
Sbjct: 290 RYQGVNLYVKNLDDSIDDDKLRKEFSPYGVITSAK 324
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 86/235 (36%), Positives = 136/235 (57%), Gaps = 22/235 (9%)
Query: 77 TERALDTMNFDALKGRPIRI--MWSQRDPSLRKSGVG-------NVFIKNLDKSIDNKAM 127
++A++TMN L R + + S+R+ R++ +G N+++KNL +D + +
Sbjct: 151 AQQAINTMNGMLLNDRKVFVGHFKSRRE---REAELGARALEFTNIYVKNLPVDVDEQGL 207
Query: 128 YDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFI 187
D FS FG +LS KV +D G+S+ +GFV+FE E A K++ +NG ++ ++++ G+
Sbjct: 208 QDLFSQFGKMLSVKVMRDNSGHSRCFGFVNFEKHEEAQKAVVHMNGKEVSGRLLYAGRAQ 267
Query: 188 PRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMN 237
R ER+ EL + + N+Y+KN + +D+KL++ F PYG ITS +VM
Sbjct: 268 KRVERQNELKRRFEQMKQDRLRRYQGVNLYVKNLDDSIDDDKLRKEFSPYGVITSAKVMT 327
Query: 238 NDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRF 292
G S+GFGFV + SPE A KAV NG+ V K LYV AQ+K ER L ++
Sbjct: 328 EGGHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEERKAILTNQY 382
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 121/228 (53%), Gaps = 17/228 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQD-EQGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + +Y+ FS G ILS +V +D S GY +++F+ A +++
Sbjct: 10 LASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERAL 69
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N +L G+ I +++ G + N++IKN + +++ L + F +G
Sbjct: 70 DTMNFEMLK------GQPIRIMWSQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFG 123
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S +V+ ++ SRGFGFV +E+ E A++A+ NG ++ + ++VG + + ER EL
Sbjct: 124 NILSCKVVCDEHGSRGFGFVHFETHEAAQQAINTMNGMLLNDRKVFVGHFKSRREREAEL 183
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
R + N+YVKNL +D++ L+ F+ FG + S K
Sbjct: 184 GAR----------ALEFTNIYVKNLPVDVDEQGLQDLFSQFGKMLSVK 221
>gi|302565150|ref|NP_001181379.1| polyadenylate-binding protein 1-like [Macaca mulatta]
Length = 614
Score = 363 bits (932), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 176/275 (64%), Positives = 214/275 (77%), Gaps = 4/275 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G + QP D ERALDTMNF+ LKG+PIRIMWSQRDP LRKSGVGN+FIKNL+ SI
Sbjct: 53 GYAYINFQQP--ADAERALDTMNFEMLKGQPIRIMWSQRDPGLRKSGVGNIFIKNLEDSI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFS FG+ILSCKV DE G S+G+GFVHFET EAA ++I +NGMLLN + VF
Sbjct: 111 DNKALYDTFSTFGNILSCKVVCDEHG-SRGFGFVHFETHEAAQQAINTMNGMLLNDRKVF 169
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGK 241
VG F R+ERE ELG +A FTN+Y+KN D +++ L+++F +G + S +VM +N G
Sbjct: 170 VGHFKSRREREAELGARALEFTNIYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRDNSGH 229
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
SR FGFV +E E A+KAV NGKEV G++LY GRAQK+ ER ELKRRFE +K +RL
Sbjct: 230 SRCFGFVNFEKHEEAQKAVVHMNGKEVSGRLLYAGRAQKRVERQNELKRRFEQMKQDRLR 289
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLYVKNLDDSIDD++LRKEF+P+G ITSAK
Sbjct: 290 RYQGVNLYVKNLDDSIDDDKLRKEFSPYGVITSAK 324
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 86/235 (36%), Positives = 136/235 (57%), Gaps = 22/235 (9%)
Query: 77 TERALDTMNFDALKGRPIRI--MWSQRDPSLRKSGVG-------NVFIKNLDKSIDNKAM 127
++A++TMN L R + + S+R+ R++ +G N+++KNL +D + +
Sbjct: 151 AQQAINTMNGMLLNDRKVFVGHFKSRRE---REAELGARALEFTNIYVKNLPVDVDEQGL 207
Query: 128 YDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFI 187
D FS FG +LS KV +D G+S+ +GFV+FE E A K++ +NG ++ ++++ G+
Sbjct: 208 QDLFSQFGKMLSVKVMRDNSGHSRCFGFVNFEKHEEAQKAVVHMNGKEVSGRLLYAGRAQ 267
Query: 188 PRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMN 237
R ER+ EL + + N+Y+KN + +D+KL++ F PYG ITS +VM
Sbjct: 268 KRVERQNELKRRFEQMKQDRLRRYQGVNLYVKNLDDSIDDDKLRKEFSPYGVITSAKVMT 327
Query: 238 NDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRF 292
G S+GFGFV + SPE A KAV NG+ V K LYV AQ+K ER L ++
Sbjct: 328 EGGHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEERKAILTNQY 382
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 121/228 (53%), Gaps = 17/228 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQD-EQGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + +Y+ FS G ILS +V +D S GY +++F+ A +++
Sbjct: 10 LASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERAL 69
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N +L G+ I +++ G + N++IKN + +++ L + F +G
Sbjct: 70 DTMNFEMLK------GQPIRIMWSQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFG 123
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S +V+ ++ SRGFGFV +E+ E A++A+ NG ++ + ++VG + + ER EL
Sbjct: 124 NILSCKVVCDEHGSRGFGFVHFETHEAAQQAINTMNGMLLNDRKVFVGHFKSRREREAEL 183
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
R + N+YVKNL +D++ L+ F+ FG + S K
Sbjct: 184 GAR----------ALEFTNIYVKNLPVDVDEQGLQDLFSQFGKMLSVK 221
>gi|440899695|gb|ELR50961.1| Polyadenylate-binding protein 1-like protein, partial [Bos
grunniens mutus]
Length = 618
Score = 363 bits (931), Expect = 8e-98, Method: Compositional matrix adjust.
Identities = 173/262 (66%), Positives = 211/262 (80%), Gaps = 2/262 (0%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D ERALDTMNF+ +KG+PIRIMWSQRDP LRKSGVGN+FIKNL+ SIDNKA+YDTFS FG
Sbjct: 64 DAERALDTMNFEVIKGQPIRIMWSQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFG 123
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCKV DE G S+G+GFVHFET EAA +I +NGMLLN + VFVG F R+ERE E
Sbjct: 124 NILSCKVVCDEHG-SRGFGFVHFETHEAAQNAISTMNGMLLNDRKVFVGHFKSRREREVE 182
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGKSRGFGFVAYESPE 254
LG +A FTN+Y+KN D ++++L+++F +G + S +VM + G SRGFGFV +E E
Sbjct: 183 LGARAMEFTNIYVKNLHVDVDEQRLQDLFSQFGKMLSVKVMRDVSGHSRGFGFVNFEKHE 242
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A+KAV NG+EV G++LYVGRAQK+ ER ELKRRFE +K +RL RYQGVNLYVKNLD
Sbjct: 243 EAQKAVVNMNGREVSGRLLYVGRAQKRVERQNELKRRFEQMKQDRLTRYQGVNLYVKNLD 302
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
DSIDDE+LRKEF+P+G ITSAK
Sbjct: 303 DSIDDEKLRKEFSPYGVITSAK 324
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 78/196 (39%), Positives = 119/196 (60%), Gaps = 11/196 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
N+++KNL +D + + D FS FG +LS KV +D G+S+G+GFV+FE E A K++ +
Sbjct: 192 NIYVKNLHVDVDEQRLQDLFSQFGKMLSVKVMRDVSGHSRGFGFVNFEKHEEAQKAVVNM 251
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKLK 221
NG ++ ++++VG+ R ER+ EL + + N+Y+KN + +DEKL+
Sbjct: 252 NGREVSGRLLYVGRAQKRVERQNELKRRFEQMKQDRLTRYQGVNLYVKNLDDSIDDEKLR 311
Query: 222 EMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQ-K 280
+ F PYG ITS +VM G S+GFGFV + SPE A KAV NG+ V K LYV A+ +
Sbjct: 312 KEFSPYGVITSAKVMTEGGHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAEGR 371
Query: 281 KAERTQELKRRFEMLK 296
KA T + +R ++
Sbjct: 372 KAILTNQYMQRLSTMR 387
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 121/228 (53%), Gaps = 17/228 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQD-EQGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + +Y+ FS G ILS +V +D S GY +++F+ A +++
Sbjct: 10 LASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERAL 69
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N ++ + + + +++ G + N++IKN + +++ L + F +G
Sbjct: 70 DTMNFEVIKGQPIRI------MWSQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFG 123
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S +V+ ++ SRGFGFV +E+ E A+ A+ NG ++ + ++VG + + ER EL
Sbjct: 124 NILSCKVVCDEHGSRGFGFVHFETHEAAQNAISTMNGMLLNDRKVFVGHFKSRREREVEL 183
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
R + N+YVKNL +D++RL+ F+ FG + S K
Sbjct: 184 GAR----------AMEFTNIYVKNLHVDVDEQRLQDLFSQFGKMLSVK 221
>gi|332858528|ref|XP_003317002.1| PREDICTED: poly(A) binding protein, cytoplasmic 1-like isoform 1
[Pan troglodytes]
Length = 330
Score = 362 bits (929), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 178/275 (64%), Positives = 215/275 (78%), Gaps = 4/275 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G + QP D ERALDTMNF+ LKG+PIRIMWSQRDP LRKSGVGN+FIKNL+ SI
Sbjct: 53 GYAYINFQQP--ADAERALDTMNFEMLKGQPIRIMWSQRDPGLRKSGVGNIFIKNLEDSI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFS FG+ILSCKVA DE G S+G+GFVHFET EAA ++I +NGMLLN + VF
Sbjct: 111 DNKALYDTFSTFGNILSCKVACDEHG-SRGFGFVHFETHEAAQQAINTMNGMLLNDRKVF 169
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGK 241
VG F R+ERE ELG +A FTN+Y+KN D +++ L+E+F +G + S +VM +N G
Sbjct: 170 VGHFKSRREREAELGARALEFTNIYVKNLPVDVDEQGLQELFSQFGKMLSVKVMRDNSGH 229
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
SR FGFV +E E A+KAV NGKEV G++LY GRAQK+ ER ELKRRFE +K +RL
Sbjct: 230 SRCFGFVNFEKHEEAQKAVVHMNGKEVSGRLLYAGRAQKRVERQNELKRRFEQMKQDRLR 289
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLYVKNLDDSIDD++LRKEF+P+G ITSAK
Sbjct: 290 RYQGVNLYVKNLDDSIDDDKLRKEFSPYGVITSAK 324
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 121/228 (53%), Gaps = 17/228 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQD-EQGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + +Y+ FS G ILS +V +D S GY +++F+ A +++
Sbjct: 10 LASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERAL 69
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N +L G+ I +++ G + N++IKN + +++ L + F +G
Sbjct: 70 DTMNFEMLK------GQPIRIMWSQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFG 123
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S +V ++ SRGFGFV +E+ E A++A+ NG ++ + ++VG + + ER EL
Sbjct: 124 NILSCKVACDEHGSRGFGFVHFETHEAAQQAINTMNGMLLNDRKVFVGHFKSRREREAEL 183
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
R + N+YVKNL +D++ L++ F+ FG + S K
Sbjct: 184 GAR----------ALEFTNIYVKNLPVDVDEQGLQELFSQFGKMLSVK 221
>gi|119596295|gb|EAW75889.1| hCG2019100, isoform CRA_c [Homo sapiens]
Length = 433
Score = 362 bits (929), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 177/275 (64%), Positives = 215/275 (78%), Gaps = 4/275 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G + QP D ERALDTMNF+ LKG+PIRIMWSQRDP LRKSGVGN+FIKNL+ SI
Sbjct: 53 GYAYINFQQP--ADAERALDTMNFEMLKGQPIRIMWSQRDPGLRKSGVGNIFIKNLEDSI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFS FG+ILSCKVA DE G S+G+GFVHFET EAA ++I +NGMLLN + VF
Sbjct: 111 DNKALYDTFSTFGNILSCKVACDEHG-SRGFGFVHFETHEAAQQAINTMNGMLLNDRKVF 169
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGK 241
VG F R+ERE ELG +A FTN+Y+KN D +++ L+++F +G + S +VM +N G
Sbjct: 170 VGHFKSRREREAELGARALEFTNIYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRDNSGH 229
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
SR FGFV +E E A+KAV NGKEV G++LY GRAQK+ ER ELKRRFE +K +RL
Sbjct: 230 SRCFGFVNFEKHEEAQKAVVHMNGKEVSGRLLYAGRAQKRVERQNELKRRFEQMKQDRLR 289
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLYVKNLDDSIDD++LRKEF+P+G ITSAK
Sbjct: 290 RYQGVNLYVKNLDDSIDDDKLRKEFSPYGVITSAK 324
Score = 150 bits (379), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 86/235 (36%), Positives = 136/235 (57%), Gaps = 22/235 (9%)
Query: 77 TERALDTMNFDALKGRPIRI--MWSQRDPSLRKSGVG-------NVFIKNLDKSIDNKAM 127
++A++TMN L R + + S+R+ R++ +G N+++KNL +D + +
Sbjct: 151 AQQAINTMNGMLLNDRKVFVGHFKSRRE---REAELGARALEFTNIYVKNLPVDVDEQGL 207
Query: 128 YDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFI 187
D FS FG +LS KV +D G+S+ +GFV+FE E A K++ +NG ++ ++++ G+
Sbjct: 208 QDLFSQFGKMLSVKVMRDNSGHSRCFGFVNFEKHEEAQKAVVHMNGKEVSGRLLYAGRAQ 267
Query: 188 PRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMN 237
R ER+ EL + + N+Y+KN + +D+KL++ F PYG ITS +VM
Sbjct: 268 KRVERQNELKRRFEQMKQDRLRRYQGVNLYVKNLDDSIDDDKLRKEFSPYGVITSAKVMT 327
Query: 238 NDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRF 292
G S+GFGFV + SPE A KAV NG+ V K LYV AQ+K ER L ++
Sbjct: 328 EGGHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEERKAILTNQY 382
Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 120/228 (52%), Gaps = 17/228 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQD-EQGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + +Y+ FS G ILS +V +D S GY +++F+ A +++
Sbjct: 10 LASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERAL 69
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N +L G+ I +++ G + N++IKN + +++ L + F +G
Sbjct: 70 DTMNFEMLK------GQPIRIMWSQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFG 123
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S +V ++ SRGFGFV +E+ E A++A+ NG ++ + ++VG + + ER EL
Sbjct: 124 NILSCKVACDEHGSRGFGFVHFETHEAAQQAINTMNGMLLNDRKVFVGHFKSRREREAEL 183
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
R + N+YVKNL +D++ L+ F+ FG + S K
Sbjct: 184 GAR----------ALEFTNIYVKNLPVDVDEQGLQDLFSQFGKMLSVK 221
>gi|444726222|gb|ELW66761.1| Polyadenylate-binding protein 1-like protein [Tupaia chinensis]
Length = 568
Score = 362 bits (928), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 172/262 (65%), Positives = 211/262 (80%), Gaps = 2/262 (0%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D ERALDTMNF+ +KG+PIRIMWSQRDP LRKSGVGN+FIKNL+ SIDNKA+YDTFS FG
Sbjct: 39 DAERALDTMNFEVIKGQPIRIMWSQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFG 98
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCKV DE G S+G+GFVHFET +AA ++I +NGMLLN + VFVG F R+ERE E
Sbjct: 99 NILSCKVVCDEHG-SRGFGFVHFETHDAAQRAISTMNGMLLNDRKVFVGHFKSRREREAE 157
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPE 254
LG + FTN+Y+KN D ++ L+++F +G + S +VM ++ G SRGFGFV +E E
Sbjct: 158 LGARVMEFTNIYVKNLQVDVDERGLQDLFSQFGKMLSVKVMRDSSGHSRGFGFVNFEKHE 217
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A+KAV NGKEV G++LYVGRAQK+ ER ELKRRFE +K +RLNRYQGVNLYVKNLD
Sbjct: 218 EAQKAVVHMNGKEVSGRLLYVGRAQKRLERQNELKRRFEQMKQDRLNRYQGVNLYVKNLD 277
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
DSI+DE+LRKEF+P+G ITSAK
Sbjct: 278 DSINDEKLRKEFSPYGVITSAK 299
Score = 161 bits (407), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 91/235 (38%), Positives = 137/235 (58%), Gaps = 22/235 (9%)
Query: 77 TERALDTMNFDALKGRPIRI--MWSQRDPSLRKSGVG-------NVFIKNLDKSIDNKAM 127
+RA+ TMN L R + + S+R+ R++ +G N+++KNL +D + +
Sbjct: 126 AQRAISTMNGMLLNDRKVFVGHFKSRRE---REAELGARVMEFTNIYVKNLQVDVDERGL 182
Query: 128 YDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFI 187
D FS FG +LS KV +D G+S+G+GFV+FE E A K++ +NG ++ ++++VG+
Sbjct: 183 QDLFSQFGKMLSVKVMRDSSGHSRGFGFVNFEKHEEAQKAVVHMNGKEVSGRLLYVGRAQ 242
Query: 188 PRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMN 237
R ER+ EL + + N+Y+KN + NDEKL++ F PYG ITS +VM
Sbjct: 243 KRLERQNELKRRFEQMKQDRLNRYQGVNLYVKNLDDSINDEKLRKEFSPYGVITSAKVMT 302
Query: 238 NDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRF 292
G S+GFGFV + SPE A KAV NG+ V K LYV AQ+K ER L ++
Sbjct: 303 EGGHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEERKAILTNQY 357
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 111/211 (52%), Gaps = 17/211 (8%)
Query: 127 MYDTFSAFGSILSCKVAQD-EQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGK 185
+Y+ FS G ILS +V +D S Y +++F+ A ++++ +N ++ G+
Sbjct: 2 LYEKFSPAGPILSIRVCRDVATRRSLCYAYINFQQPADAERALDTMNFEVIK------GQ 55
Query: 186 FIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDGKSRGF 245
I +++ G + N++IKN + +++ L + F +G I S +V+ ++ SRGF
Sbjct: 56 PIRIMWSQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFGNILSCKVVCDEHGSRGF 115
Query: 246 GFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQG 305
GFV +E+ + A++A+ NG ++ + ++VG + + ER EL R +
Sbjct: 116 GFVHFETHDAAQRAISTMNGMLLNDRKVFVGHFKSRREREAELGARV----------MEF 165
Query: 306 VNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
N+YVKNL +D+ L+ F+ FG + S K
Sbjct: 166 TNIYVKNLQVDVDERGLQDLFSQFGKMLSVK 196
>gi|426391822|ref|XP_004062265.1| PREDICTED: polyadenylate-binding protein 1-like isoform 2 [Gorilla
gorilla gorilla]
gi|164651982|gb|ABY64766.1| ePAB [Homo sapiens]
Length = 330
Score = 361 bits (926), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 177/275 (64%), Positives = 215/275 (78%), Gaps = 4/275 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G + QP D ERALDTMNF+ LKG+PIRIMWSQRDP LRKSGVGN+FIKNL+ SI
Sbjct: 53 GYAYINFQQP--ADAERALDTMNFEMLKGQPIRIMWSQRDPGLRKSGVGNIFIKNLEDSI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFS FG+ILSCKVA DE G S+G+GFVHFET EAA ++I +NGMLLN + VF
Sbjct: 111 DNKALYDTFSTFGNILSCKVACDEHG-SRGFGFVHFETHEAAQQAINTMNGMLLNDRKVF 169
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGK 241
VG F R+ERE ELG +A FTN+Y+KN D +++ L+++F +G + S +VM +N G
Sbjct: 170 VGHFKSRREREAELGARALEFTNIYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRDNSGH 229
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
SR FGFV +E E A+KAV NGKEV G++LY GRAQK+ ER ELKRRFE +K +RL
Sbjct: 230 SRCFGFVNFEKHEEAQKAVVHMNGKEVSGRLLYAGRAQKRVERQNELKRRFEQMKQDRLR 289
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLYVKNLDDSIDD++LRKEF+P+G ITSAK
Sbjct: 290 RYQGVNLYVKNLDDSIDDDKLRKEFSPYGVITSAK 324
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 120/228 (52%), Gaps = 17/228 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQD-EQGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + +Y+ FS G ILS +V +D S GY +++F+ A +++
Sbjct: 10 LASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERAL 69
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N +L G+ I +++ G + N++IKN + +++ L + F +G
Sbjct: 70 DTMNFEMLK------GQPIRIMWSQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFG 123
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S +V ++ SRGFGFV +E+ E A++A+ NG ++ + ++VG + + ER EL
Sbjct: 124 NILSCKVACDEHGSRGFGFVHFETHEAAQQAINTMNGMLLNDRKVFVGHFKSRREREAEL 183
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
R + N+YVKNL +D++ L+ F+ FG + S K
Sbjct: 184 GAR----------ALEFTNIYVKNLPVDVDEQGLQDLFSQFGKMLSVK 221
>gi|355784464|gb|EHH65315.1| Polyadenylate-binding protein 1-like protein [Macaca fascicularis]
Length = 635
Score = 360 bits (924), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 172/261 (65%), Positives = 209/261 (80%), Gaps = 2/261 (0%)
Query: 77 TERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGS 136
ERALDTMNF+ LKG+PIRIMWSQRDP LRKSGVGN+FIKNL+ SIDNKA+YDTFS FG+
Sbjct: 77 AERALDTMNFEMLKGQPIRIMWSQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFGN 136
Query: 137 ILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKEL 196
ILSCKV DE G S+G+GFVHFET EAA ++I +NGMLLN + VFVG F R+ERE EL
Sbjct: 137 ILSCKVVCDEHG-SRGFGFVHFETHEAAQQAINTMNGMLLNDRKVFVGHFKSRREREAEL 195
Query: 197 GEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPEF 255
G +A FTN+Y+KN D +++ L+++F +G + S +VM +N G SR FGFV +E E
Sbjct: 196 GARALEFTNIYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRDNSGHSRCFGFVNFEKHEE 255
Query: 256 AEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDD 315
A+KAV NGKEV G++LY GRAQK+ ER ELKRRFE +K +RL RYQGVNLYVKNLDD
Sbjct: 256 AQKAVVHMNGKEVSGRLLYAGRAQKRVERQNELKRRFEQMKQDRLRRYQGVNLYVKNLDD 315
Query: 316 SIDDERLRKEFTPFGTITSAK 336
SIDD++LRKEF+P+G ITSAK
Sbjct: 316 SIDDDKLRKEFSPYGVITSAK 336
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 79/249 (31%), Positives = 128/249 (51%), Gaps = 41/249 (16%)
Query: 77 TERALDTMNFDALKGRPIRI--MWSQRDPSLRKSGVG-------NVFIKNLDKSIDNKAM 127
++A++TMN L R + + S+R+ R++ +G N+++KNL +D + +
Sbjct: 163 AQQAINTMNGMLLNDRKVFVGHFKSRRE---REAELGARALEFTNIYVKNLPVDVDEQGL 219
Query: 128 YDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFI 187
D FS FG +LS KV +D G+S+ +GFV+FE E A K++ +NG ++ ++++ G+
Sbjct: 220 QDLFSQFGKMLSVKVMRDNSGHSRCFGFVNFEKHEEAQKAVVHMNGKEVSGRLLYAGRAQ 279
Query: 188 PRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMN 237
R ER+ EL + + N+Y+KN + +D+KL++ F PYG ITS +
Sbjct: 280 KRVERQNELKRRFEQMKQDRLRRYQGVNLYVKNLDDSIDDDKLRKEFSPYGVITSAK--- 336
Query: 238 NDGKSRGFGFVAYESP--------------EFAEKAVQAWNGKEVDGKILYVGRAQKKAE 283
G G+ F P E A KAV NG+ V K LYV AQ+K E
Sbjct: 337 --GVGAGYPFWGSADPVGTCSPSAALSGLKEEATKAVTEMNGRIVGTKPLYVALAQRKEE 394
Query: 284 RTQELKRRF 292
R L ++
Sbjct: 395 RKAILTNQY 403
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 121/237 (51%), Gaps = 23/237 (9%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQD------EQGNSKGYGFVHFET--- 160
+ ++++ +L + +Y+ FS G ILS +V +D S GY +++F+
Sbjct: 10 LASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRFLPTRRSLGYAYINFQQPAD 69
Query: 161 -EEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEK 219
EE A ++ ++ M + G+ I +++ G + N++IKN + +++
Sbjct: 70 GEEQAQRAERALDTMNFE---MLKGQPIRIMWSQRDPGLRKSGVGNIFIKNLEDSIDNKA 126
Query: 220 LKEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQ 279
L + F +G I S +V+ ++ SRGFGFV +E+ E A++A+ NG ++ + ++VG +
Sbjct: 127 LYDTFSTFGNILSCKVVCDEHGSRGFGFVHFETHEAAQQAINTMNGMLLNDRKVFVGHFK 186
Query: 280 KKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ ER EL R + N+YVKNL +D++ L+ F+ FG + S K
Sbjct: 187 SRREREAELGAR----------ALEFTNIYVKNLPVDVDEQGLQDLFSQFGKMLSVK 233
>gi|194224457|ref|XP_001500563.2| PREDICTED: poly(A) binding protein, cytoplasmic 1-like [Equus
caballus]
Length = 612
Score = 360 bits (924), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 175/275 (63%), Positives = 212/275 (77%), Gaps = 4/275 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G + QP D ERALDTMNF+ +KG+PIRIMWSQRDP LRKSGVGNVFIKNL+ SI
Sbjct: 53 GYAYINFQQP--ADAERALDTMNFEVIKGQPIRIMWSQRDPGLRKSGVGNVFIKNLEDSI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFS FG+ILSCKV D+ G S+G+GFVHFET EAA ++I +NGMLLN + VF
Sbjct: 111 DNKALYDTFSTFGNILSCKVVCDDHG-SRGFGFVHFETHEAAQQAISTMNGMLLNDRKVF 169
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GK 241
VG F R+ERE ELG +A FTN+Y+KN ++ L+++F +G + S +VM +D G
Sbjct: 170 VGHFKSRREREAELGARATAFTNIYVKNLPGHVDERGLQDLFSQFGKMLSVKVMRDDSGH 229
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
SRGFGFV +E E A+KAV NG +V G++LYVGRAQK+ ER ELKRRFE K +RLN
Sbjct: 230 SRGFGFVNFEKHEEAQKAVMDMNGMQVSGRLLYVGRAQKRGERQNELKRRFEHTKQDRLN 289
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
R QGVNLYVKNLDDSIDDE+LRKEF+P+G ITSAK
Sbjct: 290 RCQGVNLYVKNLDDSIDDEKLRKEFSPYGVITSAK 324
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 88/232 (37%), Positives = 136/232 (58%), Gaps = 16/232 (6%)
Query: 77 TERALDTMNFDALKGRPIRI----MWSQRDPSL--RKSGVGNVFIKNLDKSIDNKAMYDT 130
++A+ TMN L R + + +R+ L R + N+++KNL +D + + D
Sbjct: 151 AQQAISTMNGMLLNDRKVFVGHFKSRREREAELGARATAFTNIYVKNLPGHVDERGLQDL 210
Query: 131 FSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRK 190
FS FG +LS KV +D+ G+S+G+GFV+FE E A K++ +NGM ++ ++++VG+ R
Sbjct: 211 FSQFGKMLSVKVMRDDSGHSRGFGFVNFEKHEEAQKAVMDMNGMQVSGRLLYVGRAQKRG 270
Query: 191 EREKELGEKAKLF----------TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDG 240
ER+ EL + + N+Y+KN + +DEKL++ F PYG ITS +VM G
Sbjct: 271 ERQNELKRRFEHTKQDRLNRCQGVNLYVKNLDDSIDDEKLRKEFSPYGVITSAKVMTEGG 330
Query: 241 KSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRF 292
S+GFGFV + SPE A KAV NG+ + K LYV AQ+K ER L ++
Sbjct: 331 HSKGFGFVCFSSPEEATKAVTEMNGRIIGTKPLYVALAQRKEERKAILTNQY 382
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 122/237 (51%), Gaps = 21/237 (8%)
Query: 105 LRKSGVG----NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQD-EQGNSKGYGFVHFE 159
+ SG G ++++ +L + +Y+ FS G ILS +V +D S GY +++F+
Sbjct: 1 MNASGAGYPLASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQ 60
Query: 160 TEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEK 219
A ++++ +N ++ + + + +++ G + NV+IKN + +++
Sbjct: 61 QPADAERALDTMNFEVIKGQPIRI------MWSQRDPGLRKSGVGNVFIKNLEDSIDNKA 114
Query: 220 LKEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQ 279
L + F +G I S +V+ +D SRGFGFV +E+ E A++A+ NG ++ + ++VG +
Sbjct: 115 LYDTFSTFGNILSCKVVCDDHGSRGFGFVHFETHEAAQQAISTMNGMLLNDRKVFVGHFK 174
Query: 280 KKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ ER EL R N+YVKNL +D+ L+ F+ FG + S K
Sbjct: 175 SRREREAELGARATAF----------TNIYVKNLPGHVDERGLQDLFSQFGKMLSVK 221
>gi|296200520|ref|XP_002747628.1| PREDICTED: polyadenylate-binding protein 1-like [Callithrix
jacchus]
Length = 614
Score = 360 bits (924), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 173/275 (62%), Positives = 215/275 (78%), Gaps = 4/275 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G + QP D ERALDTMNF+ LKG+PIRIMWSQRDP LRKSGVGN+FIKNL+ SI
Sbjct: 53 GYAYINFQQP--ADAERALDTMNFEMLKGQPIRIMWSQRDPGLRKSGVGNIFIKNLEDSI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFS FG+ILSCKVA D+ G S+G+GFVHFET EAA ++I +NGMLLN + VF
Sbjct: 111 DNKALYDTFSTFGNILSCKVACDKHG-SRGFGFVHFETHEAAQQAINTMNGMLLNDRKVF 169
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGK 241
VG F R+ER ELG +A FTN+Y+KN D +++ L+++F +G + S +VM +N G+
Sbjct: 170 VGHFKSRRERAAELGARALEFTNIYVKNLPADVDEQGLQDLFSQFGKMLSVKVMRDNSGR 229
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
SR FGFV +E E A+KAV NGKEV G++LY RAQK+ ER ELKR+FE +K +RL+
Sbjct: 230 SRCFGFVNFEKHEEAQKAVVHMNGKEVSGRLLYASRAQKRVERQNELKRKFEQMKQDRLS 289
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLYVKNLDDSIDD++LRKEF+P+G ITSAK
Sbjct: 290 RYQGVNLYVKNLDDSIDDDKLRKEFSPYGVITSAK 324
Score = 148 bits (373), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 85/235 (36%), Positives = 132/235 (56%), Gaps = 22/235 (9%)
Query: 77 TERALDTMNFDALKGRPIRI--MWSQRDPSLRKSGVG-------NVFIKNLDKSIDNKAM 127
++A++TMN L R + + S+R+ R + +G N+++KNL +D + +
Sbjct: 151 AQQAINTMNGMLLNDRKVFVGHFKSRRE---RAAELGARALEFTNIYVKNLPADVDEQGL 207
Query: 128 YDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFI 187
D FS FG +LS KV +D G S+ +GFV+FE E A K++ +NG ++ ++++ +
Sbjct: 208 QDLFSQFGKMLSVKVMRDNSGRSRCFGFVNFEKHEEAQKAVVHMNGKEVSGRLLYASRAQ 267
Query: 188 PRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMN 237
R ER+ EL K + N+Y+KN + +D+KL++ F PYG ITS +VM
Sbjct: 268 KRVERQNELKRKFEQMKQDRLSRYQGVNLYVKNLDDSIDDDKLRKEFSPYGVITSAKVMT 327
Query: 238 NDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRF 292
S+GFGFV + SPE A KAV NG+ V K LYV AQ+K ER L ++
Sbjct: 328 EGSHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEERKAILTNQY 382
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 120/228 (52%), Gaps = 17/228 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQD-EQGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + +Y+ FS GSILS +V +D S GY +++F+ A +++
Sbjct: 10 LASLYVGDLHPDVTEAMLYEKFSPAGSILSIRVCRDVATRRSLGYAYINFQQPADAERAL 69
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N +L + + + +++ G + N++IKN + +++ L + F +G
Sbjct: 70 DTMNFEMLKGQPIRI------MWSQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFG 123
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S +V + SRGFGFV +E+ E A++A+ NG ++ + ++VG + + ER EL
Sbjct: 124 NILSCKVACDKHGSRGFGFVHFETHEAAQQAINTMNGMLLNDRKVFVGHFKSRRERAAEL 183
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
R + N+YVKNL +D++ L+ F+ FG + S K
Sbjct: 184 GAR----------ALEFTNIYVKNLPADVDEQGLQDLFSQFGKMLSVK 221
>gi|126342190|ref|XP_001379497.1| PREDICTED: polyadenylate-binding protein 1 [Monodelphis domestica]
Length = 669
Score = 360 bits (924), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 179/282 (63%), Positives = 217/282 (76%), Gaps = 6/282 (2%)
Query: 56 TCHQLGSGAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFI 115
T H LG + Q + E L TMN D +KG PIRIMWSQRDP RK GVGNVF+
Sbjct: 82 TQHSLGYAYVNFQ----HRAHAEWVLATMNLDVIKGNPIRIMWSQRDPGQRKRGVGNVFV 137
Query: 116 KNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGML 175
KNL+KSIDNKA+YDTFS FG ILSCKV DE G SKGYGFVHFET+E+A K+IEK+NGML
Sbjct: 138 KNLEKSIDNKALYDTFSTFGRILSCKVISDENG-SKGYGFVHFETQESAGKAIEKMNGML 196
Query: 176 LNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRV 235
LN+ VFVG+F R+ERE ELG KAK +TN+YIKNFGE+ +D++L E+F YG S +V
Sbjct: 197 LNNLKVFVGRFKSRRERESELGVKAKDYTNIYIKNFGENMDDQRLTEIFAKYGPTLSVKV 256
Query: 236 MNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEM 294
M +D G+S+GFGFV+++S E A+ AV NGK+++GK +YVGRAQKK ER ELKR FE
Sbjct: 257 MTDDCGRSKGFGFVSFQSHEDAQAAVDDMNGKQLNGKQIYVGRAQKKRERQTELKRHFEQ 316
Query: 295 LKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+K + RYQGVNLY+KNLDD+I+DE LRKEF+PFGTITSAK
Sbjct: 317 IKQNQHIRYQGVNLYIKNLDDTINDEHLRKEFSPFGTITSAK 358
Score = 151 bits (382), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 83/214 (38%), Positives = 126/214 (58%), Gaps = 19/214 (8%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
N++IKN +++D++ + + F+ +G LS KV D+ G SKG+GFV F++ E A +++ +
Sbjct: 226 NIYIKNFGENMDDQRLTEIFAKYGPTLSVKVMTDDCGRSKGFGFVSFQSHEDAQAAVDDM 285
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKLK 221
NG LN K ++VG+ ++ER+ EL + N+YIKN + NDE L+
Sbjct: 286 NGKQLNGKQIYVGRAQKKRERQTELKRHFEQIKQNQHIRYQGVNLYIKNLDDTINDEHLR 345
Query: 222 EMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKK 281
+ F P+GTITS +VM +G+S+GFGFV + S + A KA + NGK V K LYV AQ+K
Sbjct: 346 KEFSPFGTITSAKVMMENGRSKGFGFVCFSSSKDAAKASREMNGKLVASKPLYVSLAQRK 405
Query: 282 AERTQELKRRFEMLKIERL--------NRYQGVN 307
ER LK ++ M ++ L N YQ N
Sbjct: 406 EERRMHLKNQY-MYRLAHLRSISNPVFNPYQLAN 438
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 123/234 (52%), Gaps = 17/234 (7%)
Query: 104 SLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEE 162
S S ++++ +L + +Y+ FS G ILS +V +D +S GY +V+F+
Sbjct: 38 STPNSPTASLYVGDLHHDVTESMLYEKFSPAGPILSIRVCRDSVTQHSLGYAYVNFQHRA 97
Query: 163 AANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKE 222
A + +N L+ V G I +++ G++ + NV++KN + +++ L +
Sbjct: 98 HAEWVLATMN---LD---VIKGNPIRIMWSQRDPGQRKRGVGNVFVKNLEKSIDNKALYD 151
Query: 223 MFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKA 282
F +G I S +V++++ S+G+GFV +E+ E A KA++ NG ++ ++VGR + +
Sbjct: 152 TFSTFGRILSCKVISDENGSKGYGFVHFETQESAGKAIEKMNGMLLNNLKVFVGRFKSRR 211
Query: 283 ERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
ER EL + + N+Y+KN +++DD+RL + F +G S K
Sbjct: 212 ERESELGVKAK----------DYTNIYIKNFGENMDDQRLTEIFAKYGPTLSVK 255
>gi|71993203|ref|NP_001021709.1| Protein PAB-1, isoform a [Caenorhabditis elegans]
gi|3880681|emb|CAA21572.1| Protein PAB-1, isoform a [Caenorhabditis elegans]
Length = 646
Score = 359 bits (922), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 175/279 (62%), Positives = 217/279 (77%), Gaps = 4/279 (1%)
Query: 60 LGSGAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLD 119
L G V QP D ERA+DTMNF+AL G+P+RIMWSQRDP++R+SG GN+FIKNLD
Sbjct: 71 LSLGYAYVNFQQP--ADAERAMDTMNFEALHGKPMRIMWSQRDPAMRRSGAGNIFIKNLD 128
Query: 120 KSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSK 179
K IDNK++YDTFS FG+ILSCKVA DE G SKGYGFVHFETEEAA +I+KVNGMLL K
Sbjct: 129 KVIDNKSIYDTFSLFGNILSCKVAIDEDGFSKGYGFVHFETEEAAQNAIQKVNGMLLAGK 188
Query: 180 IVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND 239
VFVGKF PR +R +ELGE AK FTNVY+KNFG+ +N E L+++F +G ITS VM +
Sbjct: 189 KVFVGKFQPRAQRNRELGETAKQFTNVYVKNFGDHYNKETLEKLFAKFGNITSCEVMTVE 248
Query: 240 GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGK--ILYVGRAQKKAERTQELKRRFEMLKI 297
GKS+GFGFVA+ +PE AE AVQA + ++G L+V RAQKK+ER ELK++ E K
Sbjct: 249 GKSKGFGFVAFANPEEAETAVQALHDSTIEGTDLKLHVCRAQKKSERHAELKKKHEQHKA 308
Query: 298 ERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
ER+ +YQGVNLYVKNLD+++DD+ L+K+F +G ITSAK
Sbjct: 309 ERMQKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAK 347
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 70/194 (36%), Positives = 106/194 (54%), Gaps = 14/194 (7%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV++KN + + + F+ FG+I SC+V E G SKG+GFV F E A +++ +
Sbjct: 214 NVYVKNFGDHYNKETLEKLFAKFGNITSCEVMTVE-GKSKGFGFVAFANPEEAETAVQAL 272
Query: 172 NGMLLNSK--IVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEK 219
+ + + V + + ER EL +K + N+Y+KN E +D+
Sbjct: 273 HDSTIEGTDLKLHVCRAQKKSERHAELKKKHEQHKAERMQKYQGVNLYVKNLDETVDDDG 332
Query: 220 LKEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRA 278
LK+ FE YG ITS +VM ++ G+S+GFGFV +E PE A AV N K V K LYV A
Sbjct: 333 LKKQFESYGNITSAKVMTDENGRSKGFGFVCFEKPEEATSAVTEMNSKMVCSKPLYVAIA 392
Query: 279 QKKAERTQELKRRF 292
Q+K +R +L ++
Sbjct: 393 QRKEDRRAQLASQY 406
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 124/229 (54%), Gaps = 18/229 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGN-SKGYGFVHFETEEAANKSI 168
+ ++++ +L ++ +++ FSA G +LS +V +D S GY +V+F+ A +++
Sbjct: 31 MASLYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPADAERAM 90
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N L+ K + + +++ + N++IKN + +++ + + F +G
Sbjct: 91 DTMNFEALHGKPMRI------MWSQRDPAMRRSGAGNIFIKNLDKVIDNKSIYDTFSLFG 144
Query: 229 TITSYRV-MNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQE 287
I S +V ++ DG S+G+GFV +E+ E A+ A+Q NG + GK ++VG+ Q +A+R +E
Sbjct: 145 NILSCKVAIDEDGFSKGYGFVHFETEEAAQNAIQKVNGMLLAGKKVFVGKFQPRAQRNRE 204
Query: 288 LKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
L + Q N+YVKN D + E L K F FG ITS +
Sbjct: 205 LGETAK----------QFTNVYVKNFGDHYNKETLEKLFAKFGNITSCE 243
>gi|196008415|ref|XP_002114073.1| hypothetical protein TRIADDRAFT_27786 [Trichoplax adhaerens]
gi|190583092|gb|EDV23163.1| hypothetical protein TRIADDRAFT_27786 [Trichoplax adhaerens]
Length = 622
Score = 359 bits (922), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 175/275 (63%), Positives = 218/275 (79%), Gaps = 3/275 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDT+NFD + G+P RIMWSQRDPSLR+SGVGN+FIKNL+K I
Sbjct: 61 GYAYVNFQQPN--DAERALDTLNFDPVNGKPCRIMWSQRDPSLRRSGVGNIFIKNLEKDI 118
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFSAFG+ILSCK+A DE GNSKGY FVHFET+EAAN++IEKVNGMLL+ K VF
Sbjct: 119 DNKAIYDTFSAFGNILSCKIALDENGNSKGYAFVHFETQEAANRAIEKVNGMLLSGKKVF 178
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GK 241
VG F+ RKER +++G A +TN+Y+KNF +D +D++ +++FE G I S VM +D GK
Sbjct: 179 VGHFMSRKERMEKIGNLAAKYTNLYVKNFRDDISDDEFRDLFEQCGKIVSCVVMRDDSGK 238
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
SRGFGFV+YE+ E A+KAV+ N KE D + +YV RAQKK+ER+ L+R++E K E +
Sbjct: 239 SRGFGFVSYETHEAAQKAVETLNEKEFDLRRMYVARAQKKSERSALLRRQYEQKKQEMMK 298
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
R+QGVNLYVKNLDD IDD +LR+EF FGTITSAK
Sbjct: 299 RFQGVNLYVKNLDDVIDDAKLRQEFANFGTITSAK 333
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 88/250 (35%), Positives = 138/250 (55%), Gaps = 22/250 (8%)
Query: 79 RALDTMNFDALKGRPIRI-MWSQRDPSLRKSG-----VGNVFIKNLDKSIDNKAMYDTFS 132
RA++ +N L G+ + + + R + K G N+++KN I + D F
Sbjct: 162 RAIEKVNGMLLSGKKVFVGHFMSRKERMEKIGNLAAKYTNLYVKNFRDDISDDEFRDLFE 221
Query: 133 AFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKER 192
G I+SC V +D+ G S+G+GFV +ET EAA K++E +N + + ++V + + ER
Sbjct: 222 QCGKIVSCVVMRDDSGKSRGFGFVSYETHEAAQKAVETLNEKEFDLRRMYVARAQKKSER 281
Query: 193 --------EKELGEKAKLF--TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GK 241
E++ E K F N+Y+KN + +D KL++ F +GTITS +VM+++ G
Sbjct: 282 SALLRRQYEQKKQEMMKRFQGVNLYVKNLDDVIDDAKLRQEFANFGTITSAKVMSDEKGI 341
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELK----RRFEMLKI 297
SRGFGFV + SPE A KAV NG+ + K LYV AQ+K +R +L +R L+I
Sbjct: 342 SRGFGFVCFSSPEEATKAVTEMNGRIIISKPLYVALAQRKEDRKAQLAAQYVQRMSTLRI 401
Query: 298 ERLNRYQGVN 307
+ + GVN
Sbjct: 402 PQPGQ-PGVN 410
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 115/226 (50%), Gaps = 20/226 (8%)
Query: 113 VFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSIEKV 171
+++ +L ++ +Y+ F++ G I S +V +D S GY +V+F+ A ++++ +
Sbjct: 21 LYVGDLAPDVNEAQLYEKFNSTGPISSIRVCRDAITRRSLGYAYVNFQQPNDAERALDTL 80
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTIT 231
N +N K I +R+ L N++IKN +D +++ + + F +G I
Sbjct: 81 NFDPVNGKPC----RIMWSQRDPSLRRSG--VGNIFIKNLEKDIDNKAIYDTFSAFGNIL 134
Query: 232 SYRV-MNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKR 290
S ++ ++ +G S+G+ FV +E+ E A +A++ NG + GK ++VG + ER
Sbjct: 135 SCKIALDENGNSKGYAFVHFETQEAANRAIEKVNGMLLSGKKVFVGHFMSRKER------ 188
Query: 291 RFEMLKIERL-NRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSA 335
M KI L +Y NLYVKN D I D+ R F G I S
Sbjct: 189 ---MEKIGNLAAKY--TNLYVKNFRDDISDDEFRDLFEQCGKIVSC 229
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 66/134 (49%), Gaps = 20/134 (14%)
Query: 206 VYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQAW 263
+Y+ + D N+ +L E F G I+S RV + +S G+ +V ++ P AE+A+
Sbjct: 21 LYVGDLAPDVNEAQLYEKFNSTGPISSIRVCRDAITRRSLGYAYVNFQQPNDAERALDTL 80
Query: 264 NGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGV-NLYVKNLDDSIDDERL 322
N V+GK + +Q R L+R GV N+++KNL+ ID++ +
Sbjct: 81 NFDPVNGKPCRIMWSQ----RDPSLRR-------------SGVGNIFIKNLEKDIDNKAI 123
Query: 323 RKEFTPFGTITSAK 336
F+ FG I S K
Sbjct: 124 YDTFSAFGNILSCK 137
>gi|170574509|ref|XP_001892845.1| polyadenylate-binding protein 4 [Brugia malayi]
gi|158601405|gb|EDP38326.1| polyadenylate-binding protein 4, putative [Brugia malayi]
Length = 462
Score = 359 bits (922), Expect = 9e-97, Method: Compositional matrix adjust.
Identities = 179/277 (64%), Positives = 218/277 (78%), Gaps = 5/277 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD + G+PIRIMWSQRDPS+R+SG GN+FIKNLDKSI
Sbjct: 60 GYAYVNFQQP--ADAERALDTMNFDMMYGKPIRIMWSQRDPSMRRSGAGNIFIKNLDKSI 117
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFS FG+ILSCKVA DE+ NSKGYGFVHFETEE+A K+IEKVNGMLL K V+
Sbjct: 118 DNKAIYDTFSMFGNILSCKVANDEELNSKGYGFVHFETEESAQKAIEKVNGMLLEGKKVY 177
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGK 241
VGKF PR R +E+GE + FTNVYIKNF ++ + E L+++F +G ITS VM + DGK
Sbjct: 178 VGKFQPRMARLREMGETTRRFTNVYIKNFADELDKEALEKLFFKFGKITSAAVMVDADGK 237
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDG--KILYVGRAQKKAERTQELKRRFEMLKIER 299
S+GFGFVA+E+PE AEKAV + E+ G + LYV RAQKK ER+ ELKRR+E K+ER
Sbjct: 238 SKGFGFVAFENPEDAEKAVTEMHEYELPGTERKLYVCRAQKKNERSAELKRRYEQQKVER 297
Query: 300 LNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ RYQGVNLYVKNLDD+++D+ L++ F +G ITSAK
Sbjct: 298 MQRYQGVNLYVKNLDDTVNDDILKQNFEAYGKITSAK 334
Score = 127 bits (318), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 84/234 (35%), Positives = 130/234 (55%), Gaps = 19/234 (8%)
Query: 78 ERALDTMNFDALKGRPIRI-MWSQRDPSLRKSG-----VGNVFIKNLDKSIDNKAMYDTF 131
++A++ +N L+G+ + + + R LR+ G NV+IKN +D +A+ F
Sbjct: 160 QKAIEKVNGMLLEGKKVYVGKFQPRMARLREMGETTRRFTNVYIKNFADELDKEALEKLF 219
Query: 132 SAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLL--NSKIVFVGKFIPR 189
FG I S V D G SKG+GFV FE E A K++ +++ L + ++V + +
Sbjct: 220 FKFGKITSAAVMVDADGKSKGFGFVAFENPEDAEKAVTEMHEYELPGTERKLYVCRAQKK 279
Query: 190 KEREKELG--------EKAKLF--TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND 239
ER EL E+ + + N+Y+KN + ND+ LK+ FE YG ITS +VM +D
Sbjct: 280 NERSAELKRRYEQQKVERMQRYQGVNLYVKNLDDTVNDDILKQNFEAYGKITSAKVMCDD 339
Query: 240 -GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRF 292
G+S+GFGFV +E P+ A KAV NGK + K LYV AQ+K +R +L ++
Sbjct: 340 NGRSKGFGFVCFEKPDEATKAVTEMNGKMMCTKPLYVALAQRKEDRKAQLASQY 393
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 124/231 (53%), Gaps = 24/231 (10%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + +++ FS+ G +LS +V +D S GY +V+F+ A +++
Sbjct: 17 MASLYVGDLHPDVTEAMLFEKFSSAGPVLSIRVCRDAITRRSLGYAYVNFQQPADAERAL 76
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N ++ K + I +R+ + N++IKN + +++ + + F +G
Sbjct: 77 DTMNFDMMYGKPI----RIMWSQRDPSMRRSGA--GNIFIKNLDKSIDNKAIYDTFSMFG 130
Query: 229 TITSYRVMNNDG-KSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQE 287
I S +V N++ S+G+GFV +E+ E A+KA++ NG ++GK +YVG+ Q + R +E
Sbjct: 131 NILSCKVANDEELNSKGYGFVHFETEESAQKAIEKVNGMLLEGKKVYVGKFQPRMARLRE 190
Query: 288 L---KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSA 335
+ RRF N+Y+KN D +D E L K F FG ITSA
Sbjct: 191 MGETTRRF-------------TNVYIKNFADELDKEALEKLFFKFGKITSA 228
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 79/162 (48%), Gaps = 22/162 (13%)
Query: 106 RKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAAN 165
R GV N+++KNLD ++++ + F A+G I S KV D+ G SKG+GFV FE + A
Sbjct: 300 RYQGV-NLYVKNLDDTVNDDILKQNFEAYGKITSAKVMCDDNGRSKGFGFVCFEKPDEAT 358
Query: 166 KSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEK-------------AKLFTNVYIKNFG 212
K++ ++NG ++ +K ++V +++R+ +L + + VY G
Sbjct: 359 KAVTEMNGKMMCTKPLYVALAQRKEDRKAQLASQYMQRLASIRMHNAGTMHGTVYTPGTG 418
Query: 213 EDFNDEKL--KEMFEPYGTITSYRV------MNNDGKSRGFG 246
F L + F P TI ++ N G + GFG
Sbjct: 419 GFFVSSTLQNQRAFMPTATIPGAQMRGTTPRWNTIGAAAGFG 460
>gi|780291|gb|AAA65224.1| polyadenylate-binding protein [Caenorhabditis elegans]
Length = 646
Score = 358 bits (920), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 175/279 (62%), Positives = 217/279 (77%), Gaps = 4/279 (1%)
Query: 60 LGSGAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLD 119
L G V QP D ERA+DTMNF+AL G+P+RIMWSQRDP++R+SG GN+FIKNLD
Sbjct: 71 LSLGYAYVNFQQP--ADAERAMDTMNFEALHGKPMRIMWSQRDPAMRRSGAGNIFIKNLD 128
Query: 120 KSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSK 179
K IDNK++YDTFS FG+ILSCKVA DE G SKGYGFVHFETEEAA +I+KVNGMLL K
Sbjct: 129 KVIDNKSIYDTFSLFGNILSCKVAIDEDGFSKGYGFVHFETEEAAQNAIQKVNGMLLAGK 188
Query: 180 IVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND 239
VFVGKF PR +R +ELGE AK FTNVY+KNFG+ +N E L+++F +G ITS VM +
Sbjct: 189 KVFVGKFQPRAQRNRELGETAKQFTNVYVKNFGDHYNKETLEKVFAKFGNITSCEVMTVE 248
Query: 240 GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGK--ILYVGRAQKKAERTQELKRRFEMLKI 297
GKS+GFGFVA+ +PE AE AVQA + ++G L+V RAQKK+ER ELK++ E K
Sbjct: 249 GKSKGFGFVAFANPEEAETAVQALHDSTIEGTDLKLHVCRAQKKSERHAELKKKHEQHKA 308
Query: 298 ERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
ER+ +YQGVNLYVKNLD+++DD+ L+K+F +G ITSAK
Sbjct: 309 ERMQKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAK 347
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/194 (35%), Positives = 105/194 (54%), Gaps = 14/194 (7%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV++KN + + + F+ FG+I SC+V E G SKG+GFV F E A +++ +
Sbjct: 214 NVYVKNFGDHYNKETLEKVFAKFGNITSCEVMTVE-GKSKGFGFVAFANPEEAETAVQAL 272
Query: 172 NGMLLNSK--IVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEK 219
+ + + V + + ER EL +K + N+Y+KN E +D+
Sbjct: 273 HDSTIEGTDLKLHVCRAQKKSERHAELKKKHEQHKAERMQKYQGVNLYVKNLDETVDDDG 332
Query: 220 LKEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRA 278
LK+ FE YG ITS +VM ++ G+S+GFGFV +E PE A AV N K V K LYV
Sbjct: 333 LKKQFESYGNITSAKVMTDENGRSKGFGFVCFEKPEEATSAVTEMNSKMVCSKPLYVAIG 392
Query: 279 QKKAERTQELKRRF 292
Q+K +R +L ++
Sbjct: 393 QRKEDRRAQLASQY 406
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 124/229 (54%), Gaps = 18/229 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGN-SKGYGFVHFETEEAANKSI 168
+ ++++ +L ++ +++ FSA G +LS +V +D S GY +V+F+ A +++
Sbjct: 31 MASLYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPADAERAM 90
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N L+ K + + +++ + N++IKN + +++ + + F +G
Sbjct: 91 DTMNFEALHGKPMRI------MWSQRDPAMRRSGAGNIFIKNLDKVIDNKSIYDTFSLFG 144
Query: 229 TITSYRV-MNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQE 287
I S +V ++ DG S+G+GFV +E+ E A+ A+Q NG + GK ++VG+ Q +A+R +E
Sbjct: 145 NILSCKVAIDEDGFSKGYGFVHFETEEAAQNAIQKVNGMLLAGKKVFVGKFQPRAQRNRE 204
Query: 288 LKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
L + Q N+YVKN D + E L K F FG ITS +
Sbjct: 205 LGETAK----------QFTNVYVKNFGDHYNKETLEKVFAKFGNITSCE 243
>gi|301624826|ref|XP_002941699.1| PREDICTED: polyadenylate-binding protein 4-like [Xenopus (Silurana)
tropicalis]
Length = 632
Score = 358 bits (919), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 177/253 (69%), Positives = 210/253 (83%), Gaps = 3/253 (1%)
Query: 86 FDALKGRPIRIMW-SQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQ 144
F G+ ++W S+RDPSLRKSGVGNVFIKNLDKSIDNKA+YDTFSAFG+ILSCKV
Sbjct: 79 FHVAGGKAFTLLWFSERDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVC 138
Query: 145 DEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFT 204
DE G SKGY FVHFET++AA+++IEK+NGMLLN + VFVG+F R+ERE ELG KAK FT
Sbjct: 139 DENG-SKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKCRREREAELGAKAKEFT 197
Query: 205 NVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGKSRGFGFVAYESPEFAEKAVQAW 263
NVYIKNFGED +DE+LKE F YG S +VM + GKS+GFGFV++E E A KAV
Sbjct: 198 NVYIKNFGEDMDDERLKETFSKYGKTLSVKVMTDPSGKSKGFGFVSFERHEDANKAVDDM 257
Query: 264 NGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLR 323
NGK+V+GKI++VGRAQKK ER ELKRRFE LK ER++RYQGVNLY+KNLDD+IDDE+LR
Sbjct: 258 NGKDVNGKIMFVGRAQKKVERQAELKRRFEQLKQERISRYQGVNLYIKNLDDTIDDEKLR 317
Query: 324 KEFTPFGTITSAK 336
KEF+PFG+ITSAK
Sbjct: 318 KEFSPFGSITSAK 330
Score = 161 bits (407), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 84/191 (43%), Positives = 120/191 (62%), Gaps = 10/191 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV+IKN + +D++ + +TFS +G LS KV D G SKG+GFV FE E ANK+++ +
Sbjct: 198 NVYIKNFGEDMDDERLKETFSKYGKTLSVKVMTDPSGKSKGFGFVSFERHEDANKAVDDM 257
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKLK 221
NG +N KI+FVG+ + ER+ EL + + N+YIKN + +DEKL+
Sbjct: 258 NGKDVNGKIMFVGRAQKKVERQAELKRRFEQLKQERISRYQGVNLYIKNLDDTIDDEKLR 317
Query: 222 EMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKK 281
+ F P+G+ITS +VM +G+S+GFGFV + SPE A KAV NG+ V K LYV AQ+K
Sbjct: 318 KEFSPFGSITSAKVMLEEGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRK 377
Query: 282 AERTQELKRRF 292
ER L ++
Sbjct: 378 EERKAHLTNQY 388
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 115/228 (50%), Gaps = 11/228 (4%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + +Y+ FS G +LS +V +D S GY +V+F+
Sbjct: 10 MASLYVGDLHPDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADGEYGN 69
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ M + + F E++ + NV+IKN + +++ L + F +G
Sbjct: 70 LLFDRMDVCFHVAGGKAFTLLWFSERDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFG 129
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S +V+ ++ S+G+ FV +E+ + A++A++ NG ++ + ++VGR + + ER EL
Sbjct: 130 NILSCKVVCDENGSKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKCRREREAEL 189
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ + N+Y+KN + +DDERL++ F+ +G S K
Sbjct: 190 GAKAKEF----------TNVYIKNFGEDMDDERLKETFSKYGKTLSVK 227
>gi|221121498|ref|XP_002156904.1| PREDICTED: polyadenylate-binding protein 1-like isoform 1 [Hydra
magnipapillata]
Length = 635
Score = 357 bits (917), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 178/274 (64%), Positives = 223/274 (81%), Gaps = 2/274 (0%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERA+DTMN+D +KGRP RIMWSQRDP+LR+SGVGN+FIKNLDK+I
Sbjct: 53 GYAYVNFQQP--ADAERAIDTMNYDPIKGRPCRIMWSQRDPTLRRSGVGNIFIKNLDKNI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNK +YD FSAFG+ILSCK+A D + S+GYGFVH+ET+EAA+++I KVNGM+LN K VF
Sbjct: 111 DNKGLYDAFSAFGNILSCKIAVDSKNVSRGYGFVHYETKEAAHEAIAKVNGMMLNDKKVF 170
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDGKS 242
VG+F+ ++ER ++LG++AK F NV++KNFG+ ++EKLKEMF +G ITS VM GKS
Sbjct: 171 VGEFMSKRERLEKLGDQAKKFKNVFVKNFGDSLDEEKLKEMFGKHGEITSCVVMAESGKS 230
Query: 243 RGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNR 302
+GFGFVA+E+PE AE AV NG E++G+ L V RAQKKAERT ELK RFE K+ER+NR
Sbjct: 231 KGFGFVAFEAPEAAEAAVNELNGLEIEGRKLVVCRAQKKAERTMELKSRFEAQKMERINR 290
Query: 303 YQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
YQGVNLY+KNL+D +DDERLR EF+ +GTITSAK
Sbjct: 291 YQGVNLYIKNLEDGLDDERLRSEFSTYGTITSAK 324
Score = 120 bits (301), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 80/201 (39%), Positives = 116/201 (57%), Gaps = 16/201 (7%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NVF+KN S+D + + + F G I SC V E G SKG+GFV FE EAA ++ ++
Sbjct: 193 NVFVKNFGDSLDEEKLKEMFGKHGEITSC-VVMAESGKSKGFGFVAFEAPEAAEAAVNEL 251
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELG---EKAKL-------FTNVYIKNFGEDFNDEKLK 221
NG+ + + + V + + ER EL E K+ N+YIKN + +DE+L+
Sbjct: 252 NGLEIEGRKLVVCRAQKKAERTMELKSRFEAQKMERINRYQGVNLYIKNLEDGLDDERLR 311
Query: 222 EMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
F YGTITS +VM ++ G S+GFGFV + SP+ A KAV NG+ + K LYV AQ+
Sbjct: 312 SEFSTYGTITSAKVMKDEKGISKGFGFVCFSSPDEATKAVTEMNGRILVTKPLYVALAQR 371
Query: 281 KAERTQELKRRFEMLKIERLN 301
K ER +L +F ++R+N
Sbjct: 372 KEERRAQLSTQF----LQRVN 388
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 121/228 (53%), Gaps = 18/228 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQD-EQGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L+ + +++ FS G +LS +V +D S GY +V+F+ A ++I
Sbjct: 10 IASLYVGDLNPDVTEAMLFEKFSQTGPVLSIRVCRDLVTRRSLGYAYVNFQQPADAERAI 69
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N + + I +R+ L N++IKN ++ +++ L + F +G
Sbjct: 70 DTMNYDPIKGRPC----RIMWSQRDPTLRRSG--VGNIFIKNLDKNIDNKGLYDAFSAFG 123
Query: 229 TITSYRV-MNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQE 287
I S ++ +++ SRG+GFV YE+ E A +A+ NG ++ K ++VG K ER ++
Sbjct: 124 NILSCKIAVDSKNVSRGYGFVHYETKEAAHEAIAKVNGMMLNDKKVFVGEFMSKRERLEK 183
Query: 288 LKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSA 335
L + + K N++VKN DS+D+E+L++ F G ITS
Sbjct: 184 LGDQAKKFK----------NVFVKNFGDSLDEEKLKEMFGKHGEITSC 221
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 61/91 (67%), Gaps = 1/91 (1%)
Query: 106 RKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAAN 165
R GV N++IKNL+ +D++ + FS +G+I S KV +DE+G SKG+GFV F + + A
Sbjct: 290 RYQGV-NLYIKNLEDGLDDERLRSEFSTYGTITSAKVMKDEKGISKGFGFVCFSSPDEAT 348
Query: 166 KSIEKVNGMLLNSKIVFVGKFIPRKEREKEL 196
K++ ++NG +L +K ++V ++ER +L
Sbjct: 349 KAVTEMNGRILVTKPLYVALAQRKEERRAQL 379
>gi|403290728|ref|XP_003936459.1| PREDICTED: polyadenylate-binding protein 1-like [Saimiri
boliviensis boliviensis]
Length = 614
Score = 356 bits (913), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 173/275 (62%), Positives = 213/275 (77%), Gaps = 4/275 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G + QP D ERALDTMNF+ LKG+PIRIMWSQRDP LRKSGVGN+FIKNL+ SI
Sbjct: 53 GYAYINFQQP--ADAERALDTMNFEMLKGQPIRIMWSQRDPGLRKSGVGNIFIKNLEDSI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFS FG+ILSCKV DE G S+G+GFVHFET EAA ++I +NGMLLN + VF
Sbjct: 111 DNKALYDTFSTFGNILSCKVVCDEHG-SRGFGFVHFETYEAAQQAINTMNGMLLNDRKVF 169
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGK 241
VG F R+ER ELG +A FTN+Y+KN D +++ L+++F +G + S +VM ++ G+
Sbjct: 170 VGHFKSRRERAAELGARALEFTNIYVKNLPADVDEQGLQDLFSQFGKMLSVKVMRDSSGR 229
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
SR FGFV +E E A+KAV NGKEV G++LY RAQK+ ER ELKRRFE +K +RL+
Sbjct: 230 SRCFGFVNFEKHEEAQKAVVHMNGKEVSGRLLYASRAQKRVERQNELKRRFEQMKQDRLS 289
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLYVKNLDDSIDD +LRKEF+P+G ITSAK
Sbjct: 290 RYQGVNLYVKNLDDSIDDGKLRKEFSPYGVITSAK 324
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 84/235 (35%), Positives = 131/235 (55%), Gaps = 22/235 (9%)
Query: 77 TERALDTMNFDALKGRPIRI--MWSQRDPSLRKSGVG-------NVFIKNLDKSIDNKAM 127
++A++TMN L R + + S+R+ R + +G N+++KNL +D + +
Sbjct: 151 AQQAINTMNGMLLNDRKVFVGHFKSRRE---RAAELGARALEFTNIYVKNLPADVDEQGL 207
Query: 128 YDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFI 187
D FS FG +LS KV +D G S+ +GFV+FE E A K++ +NG ++ ++++ +
Sbjct: 208 QDLFSQFGKMLSVKVMRDSSGRSRCFGFVNFEKHEEAQKAVVHMNGKEVSGRLLYASRAQ 267
Query: 188 PRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMN 237
R ER+ EL + + N+Y+KN + +D KL++ F PYG ITS +VM
Sbjct: 268 KRVERQNELKRRFEQMKQDRLSRYQGVNLYVKNLDDSIDDGKLRKEFSPYGVITSAKVMT 327
Query: 238 NDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRF 292
S+GFGFV + SPE A KAV NG+ V K LYV AQ+K ER L ++
Sbjct: 328 EGSHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEERKAILTNQY 382
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 122/228 (53%), Gaps = 17/228 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQD-EQGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + +Y+ FS GSILS +V +D S GY +++F+ A +++
Sbjct: 10 LASLYVGDLHPDVTEAMLYEKFSPAGSILSIRVCRDVATRRSLGYAYINFQQPADAERAL 69
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N +L + + + +++ G + N++IKN + +++ L + F +G
Sbjct: 70 DTMNFEMLKGQPIRI------MWSQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFG 123
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S +V+ ++ SRGFGFV +E+ E A++A+ NG ++ + ++VG + + ER EL
Sbjct: 124 NILSCKVVCDEHGSRGFGFVHFETYEAAQQAINTMNGMLLNDRKVFVGHFKSRRERAAEL 183
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
R + N+YVKNL +D++ L+ F+ FG + S K
Sbjct: 184 GAR----------ALEFTNIYVKNLPADVDEQGLQDLFSQFGKMLSVK 221
>gi|348563863|ref|XP_003467726.1| PREDICTED: polyadenylate-binding protein 1-like [Cavia porcellus]
Length = 613
Score = 355 bits (912), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 172/262 (65%), Positives = 209/262 (79%), Gaps = 2/262 (0%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D ERALDTMNF+ +KG+PIRIMWSQRDP LRKSGVGNVFIKNL+ SID+KA+YDTFS FG
Sbjct: 64 DAERALDTMNFEVIKGQPIRIMWSQRDPGLRKSGVGNVFIKNLEDSIDSKALYDTFSTFG 123
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCKVA DE G S+G+GFVHFET EAA ++I +NGMLLN + VFVG F ++ERE E
Sbjct: 124 NILSCKVACDEHG-SRGFGFVHFETNEAAQQAIGTMNGMLLNDRKVFVGHFKSQREREAE 182
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPE 254
LG +A FTN+Y+KN D +++ L+++F +G + S +VM +N G SRGFGFV +E E
Sbjct: 183 LGAQALEFTNIYVKNLSVDMDEQGLQDLFFAFGNMLSVKVMRDNSGHSRGFGFVNFEKHE 242
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A+KAV NGKEV G+ LYVGRAQK+AER ELKRRFE LK +R RY+GVNLYVKNLD
Sbjct: 243 EAQKAVDHMNGKEVSGQQLYVGRAQKRAERQNELKRRFEQLKQDRQTRYRGVNLYVKNLD 302
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
DSI DE+LR F+P+G ITSAK
Sbjct: 303 DSISDEKLRTVFSPYGVITSAK 324
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 92/250 (36%), Positives = 144/250 (57%), Gaps = 26/250 (10%)
Query: 77 TERALDTMNFDALKGRPIRI--MWSQRDPSLRKSGVG-------NVFIKNLDKSIDNKAM 127
++A+ TMN L R + + SQR+ R++ +G N+++KNL +D + +
Sbjct: 151 AQQAIGTMNGMLLNDRKVFVGHFKSQRE---REAELGAQALEFTNIYVKNLSVDMDEQGL 207
Query: 128 YDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFI 187
D F AFG++LS KV +D G+S+G+GFV+FE E A K+++ +NG ++ + ++VG+
Sbjct: 208 QDLFFAFGNMLSVKVMRDNSGHSRGFGFVNFEKHEEAQKAVDHMNGKEVSGQQLYVGRAQ 267
Query: 188 PRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMN 237
R ER+ EL + + N+Y+KN + +DEKL+ +F PYG ITS +VM
Sbjct: 268 KRAERQNELKRRFEQLKQDRQTRYRGVNLYVKNLDDSISDEKLRTVFSPYGVITSAKVMT 327
Query: 238 NDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKI 297
S+GFGFV + SPE A KAV NG V K LYV AQ+K ER L ++ +
Sbjct: 328 EGDHSKGFGFVCFSSPEEATKAVTEMNGCIVGTKPLYVALAQRKEERKAILTNQY----M 383
Query: 298 ERLNRYQGVN 307
+RL+ Q ++
Sbjct: 384 KRLSTVQALS 393
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 119/228 (52%), Gaps = 17/228 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQD-EQGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + +Y+TFS G ILS +V +D S GY +++F+ A +++
Sbjct: 10 LSSLYVGDLHPDVTEAMLYETFSPVGPILSIRVCRDVATRRSLGYAYINFQQPADAERAL 69
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N ++ G+ I +++ G + NV+IKN + + + L + F +G
Sbjct: 70 DTMNFEVIK------GQPIRIMWSQRDPGLRKSGVGNVFIKNLEDSIDSKALYDTFSTFG 123
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S +V ++ SRGFGFV +E+ E A++A+ NG ++ + ++VG + + ER EL
Sbjct: 124 NILSCKVACDEHGSRGFGFVHFETNEAAQQAIGTMNGMLLNDRKVFVGHFKSQREREAEL 183
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ + N+YVKNL +D++ L+ F FG + S K
Sbjct: 184 GAQ----------ALEFTNIYVKNLSVDMDEQGLQDLFFAFGNMLSVK 221
>gi|71993209|ref|NP_001021710.1| Protein PAB-1, isoform b [Caenorhabditis elegans]
gi|38422742|emb|CAE54916.1| Protein PAB-1, isoform b [Caenorhabditis elegans]
Length = 583
Score = 355 bits (912), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 169/261 (64%), Positives = 211/261 (80%), Gaps = 2/261 (0%)
Query: 78 ERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSI 137
ERA+DTMNF+AL G+P+RIMWSQRDP++R+SG GN+FIKNLDK IDNK++YDTFS FG+I
Sbjct: 24 ERAMDTMNFEALHGKPMRIMWSQRDPAMRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNI 83
Query: 138 LSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELG 197
LSCKVA DE G SKGYGFVHFETEEAA +I+KVNGMLL K VFVGKF PR +R +ELG
Sbjct: 84 LSCKVAIDEDGFSKGYGFVHFETEEAAQNAIQKVNGMLLAGKKVFVGKFQPRAQRNRELG 143
Query: 198 EKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAE 257
E AK FTNVY+KNFG+ +N E L+++F +G ITS VM +GKS+GFGFVA+ +PE AE
Sbjct: 144 ETAKQFTNVYVKNFGDHYNKETLEKLFAKFGNITSCEVMTVEGKSKGFGFVAFANPEEAE 203
Query: 258 KAVQAWNGKEVDGK--ILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDD 315
AVQA + ++G L+V RAQKK+ER ELK++ E K ER+ +YQGVNLYVKNLD+
Sbjct: 204 TAVQALHDSTIEGTDLKLHVCRAQKKSERHAELKKKHEQHKAERMQKYQGVNLYVKNLDE 263
Query: 316 SIDDERLRKEFTPFGTITSAK 336
++DD+ L+K+F +G ITSAK
Sbjct: 264 TVDDDGLKKQFESYGNITSAK 284
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 70/194 (36%), Positives = 106/194 (54%), Gaps = 14/194 (7%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV++KN + + + F+ FG+I SC+V E G SKG+GFV F E A +++ +
Sbjct: 151 NVYVKNFGDHYNKETLEKLFAKFGNITSCEVMTVE-GKSKGFGFVAFANPEEAETAVQAL 209
Query: 172 NGMLLNSK--IVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEK 219
+ + + V + + ER EL +K + N+Y+KN E +D+
Sbjct: 210 HDSTIEGTDLKLHVCRAQKKSERHAELKKKHEQHKAERMQKYQGVNLYVKNLDETVDDDG 269
Query: 220 LKEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRA 278
LK+ FE YG ITS +VM ++ G+S+GFGFV +E PE A AV N K V K LYV A
Sbjct: 270 LKKQFESYGNITSAKVMTDENGRSKGFGFVCFEKPEEATSAVTEMNSKMVCSKPLYVAIA 329
Query: 279 QKKAERTQELKRRF 292
Q+K +R +L ++
Sbjct: 330 QRKEDRRAQLASQY 343
>gi|320167378|gb|EFW44277.1| poly A binding protein [Capsaspora owczarzaki ATCC 30864]
Length = 662
Score = 355 bits (911), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 169/264 (64%), Positives = 211/264 (79%), Gaps = 4/264 (1%)
Query: 75 LDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAF 134
+D ERALDT+N+ ++G+P RIMWSQRDP++RKSG+GNVFIKNLDK+IDNKA+ DTFSAF
Sbjct: 97 VDAERALDTLNYSLIRGKPCRIMWSQRDPAVRKSGLGNVFIKNLDKTIDNKALLDTFSAF 156
Query: 135 GSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREK 194
G+ILSCKV DE G SKGYGFVH+ET+EAA +I KVNGM++N K VFVG F+PRKER
Sbjct: 157 GNILSCKVVTDENG-SKGYGFVHYETQEAAETAIAKVNGMVINGKQVFVGIFVPRKER-V 214
Query: 195 ELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM--NNDGKSRGFGFVAYES 252
ELGE FTNV++KN ED D L +MF +G ITS +M ++D KS+GFGFV YE
Sbjct: 215 ELGEGVTKFTNVFVKNLPEDTTDAALNDMFSKFGKITSVVIMKSSDDDKSKGFGFVCYEK 274
Query: 253 PEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKN 312
E A+ AV A NG E+ GK L+V RAQKKAER ELK+R++ L++ER+N+YQG+NLYVKN
Sbjct: 275 VEDAQAAVNALNGTELAGKTLFVARAQKKAEREAELKQRYDALRLERINKYQGINLYVKN 334
Query: 313 LDDSIDDERLRKEFTPFGTITSAK 336
LDD+ID++++R EF PFGTITS K
Sbjct: 335 LDDAIDEDKIRTEFAPFGTITSVK 358
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 73/195 (37%), Positives = 110/195 (56%), Gaps = 14/195 (7%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGN-SKGYGFVHFETEEAANKSIEK 170
NVF+KNL + + A+ D FS FG I S + + + SKG+GFV +E E A ++
Sbjct: 225 NVFVKNLPEDTTDAALNDMFSKFGKITSVVIMKSSDDDKSKGFGFVCYEKVEDAQAAVNA 284
Query: 171 VNGMLLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKL 220
+NG L K +FV + + ERE EL ++ N+Y+KN + +++K+
Sbjct: 285 LNGTELAGKTLFVARAQKKAEREAELKQRYDALRLERINKYQGINLYVKNLDDAIDEDKI 344
Query: 221 KEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDG--KILYVGR 277
+ F P+GTITS ++M ++ GKSRGFGF+ + S E A KAV NG+ + G K LYV
Sbjct: 345 RTEFAPFGTITSVKIMRDEKGKSRGFGFICFSSAEEATKAVTEMNGQTIQGFPKPLYVAL 404
Query: 278 AQKKAERTQELKRRF 292
AQ+ +R +L F
Sbjct: 405 AQRAEDRRAQLAAHF 419
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 116/225 (51%), Gaps = 18/225 (8%)
Query: 111 GNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSIE 169
G++++ +L + +++ F+ G ++S +V +D S GY +V+F A ++++
Sbjct: 45 GSLYVGDLHPEVTEAQLFEIFNNIGPVVSIRVCRDAITRRSLGYAYVNFHAAVDAERALD 104
Query: 170 KVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGT 229
+N L+ K + +++ + NV+IKN + +++ L + F +G
Sbjct: 105 TLNYSLIRGKPCRI------MWSQRDPAVRKSGLGNVFIKNLDKTIDNKALLDTFSAFGN 158
Query: 230 ITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELK 289
I S +V+ ++ S+G+GFV YE+ E AE A+ NG ++GK ++VG + ER EL
Sbjct: 159 ILSCKVVTDENGSKGYGFVHYETQEAAETAIAKVNGMVINGKQVFVGIFVPRKERV-ELG 217
Query: 290 RRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITS 334
E + ++ N++VKNL + D L F+ FG ITS
Sbjct: 218 --------EGVTKF--TNVFVKNLPEDTTDAALNDMFSKFGKITS 252
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 66/118 (55%), Gaps = 18/118 (15%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQ----RDPSLRK-------------SGVGNVFIKNL 118
D + A++ +N L G+ + + +Q R+ L++ G+ N+++KNL
Sbjct: 277 DAQAAVNALNGTELAGKTLFVARAQKKAEREAELKQRYDALRLERINKYQGI-NLYVKNL 335
Query: 119 DKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLL 176
D +ID + F+ FG+I S K+ +DE+G S+G+GF+ F + E A K++ ++NG +
Sbjct: 336 DDAIDEDKIRTEFAPFGTITSVKIMRDEKGKSRGFGFICFSSAEEATKAVTEMNGQTI 393
>gi|351703575|gb|EHB06494.1| Polyadenylate-binding protein 1-like protein [Heterocephalus
glaber]
Length = 605
Score = 355 bits (911), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 174/275 (63%), Positives = 211/275 (76%), Gaps = 4/275 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G + QP D ERALDTMNF+ +KG+PIRIMWSQRDP LRKSGVGNVFIKNL+ SI
Sbjct: 53 GYAYINFQQP--ADAERALDTMNFEVIKGQPIRIMWSQRDPGLRKSGVGNVFIKNLEDSI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
D+KA+YDTFS FG+ILSCKVA DE G S+G+GFVHFET EAA ++I +NGMLLN + VF
Sbjct: 111 DSKALYDTFSTFGNILSCKVACDEHG-SRGFGFVHFETNEAAQQAISTMNGMLLNDRKVF 169
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGK 241
VG F +ERE ELG +A FTN+Y+KN D +++ L+++F +G + S +VM +N G
Sbjct: 170 VGHFKSHREREAELGAQALAFTNIYVKNLHVDMDEQGLQDLFFEFGKMLSVKVMRDNSGH 229
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
SRGFGFV +E E A+KAV NGKEV G+ LYVGRAQK+ ER ELKRRFE +K +R
Sbjct: 230 SRGFGFVNFEKHEEAQKAVDHMNGKEVSGQQLYVGRAQKRGERQNELKRRFEQMKQDRQT 289
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLYVKNLDDSI DE+LR F+P+G ITSAK
Sbjct: 290 RYQGVNLYVKNLDDSISDEKLRTVFSPYGVITSAK 324
Score = 154 bits (390), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 89/246 (36%), Positives = 138/246 (56%), Gaps = 20/246 (8%)
Query: 77 TERALDTMNFDALKGRPIRI----MWSQRDPSLRKSGVG--NVFIKNLDKSIDNKAMYDT 130
++A+ TMN L R + + +R+ L + N+++KNL +D + + D
Sbjct: 151 AQQAISTMNGMLLNDRKVFVGHFKSHREREAELGAQALAFTNIYVKNLHVDMDEQGLQDL 210
Query: 131 FSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRK 190
F FG +LS KV +D G+S+G+GFV+FE E A K+++ +NG ++ + ++VG+ R
Sbjct: 211 FFEFGKMLSVKVMRDNSGHSRGFGFVNFEKHEEAQKAVDHMNGKEVSGQQLYVGRAQKRG 270
Query: 191 EREKELGEKAKLF----------TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDG 240
ER+ EL + + N+Y+KN + +DEKL+ +F PYG ITS +VM G
Sbjct: 271 ERQNELKRRFEQMKQDRQTRYQGVNLYVKNLDDSISDEKLRTVFSPYGVITSAKVMTEGG 330
Query: 241 KSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERL 300
S+GFGFV + SPE A KAV NG V K LYV AQ+K ER L ++ ++RL
Sbjct: 331 HSKGFGFVCFSSPEEATKAVTEMNGCIVGTKPLYVALAQRKEERKAILTNQY----MQRL 386
Query: 301 NRYQGV 306
+ Q +
Sbjct: 387 STVQAL 392
Score = 100 bits (249), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 117/228 (51%), Gaps = 17/228 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQD-EQGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + +Y+TFS G ILS +V +D S GY +++F+ A +++
Sbjct: 10 LSSLYVGDLHPDVTEAMLYETFSPVGPILSIRVCRDVATRRSLGYAYINFQQPADAERAL 69
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N ++ G+ I +++ G + NV+IKN + + + L + F +G
Sbjct: 70 DTMNFEVIK------GQPIRIMWSQRDPGLRKSGVGNVFIKNLEDSIDSKALYDTFSTFG 123
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S +V ++ SRGFGFV +E+ E A++A+ NG ++ + ++VG + ER EL
Sbjct: 124 NILSCKVACDEHGSRGFGFVHFETNEAAQQAISTMNGMLLNDRKVFVGHFKSHREREAEL 183
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ N+YVKNL +D++ L+ F FG + S K
Sbjct: 184 GAQALAF----------TNIYVKNLHVDMDEQGLQDLFFEFGKMLSVK 221
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 69/145 (47%), Gaps = 20/145 (13%)
Query: 195 ELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDG--KSRGFGFVAYES 252
+ G + +++Y+ + D + L E F P G I S RV + +S G+ ++ ++
Sbjct: 2 QAGGQGYPLSSLYVGDLHPDVTEAMLYETFSPVGPILSIRVCRDVATRRSLGYAYINFQQ 61
Query: 253 PEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGV-NLYVK 311
P AE+A+ N + + G+ + + +Q+ R GV N+++K
Sbjct: 62 PADAERALDTMNFEVIKGQPIRIMWSQRDPGL-----------------RKSGVGNVFIK 104
Query: 312 NLDDSIDDERLRKEFTPFGTITSAK 336
NL+DSID + L F+ FG I S K
Sbjct: 105 NLEDSIDSKALYDTFSTFGNILSCK 129
>gi|166157896|ref|NP_001107551.1| polyadenylate-binding protein 1-like [Mus musculus]
gi|187960776|gb|ACD43645.1| embryonic poly(A)-binding protein [Mus musculus]
Length = 607
Score = 354 bits (909), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 171/275 (62%), Positives = 216/275 (78%), Gaps = 4/275 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G + QP D ERALDTMNF+ +KG+PIRIMWS RDP LRKSG+GN+FIKNL+ SI
Sbjct: 53 GYAYINFQQP--ADAERALDTMNFEVIKGQPIRIMWSHRDPGLRKSGMGNIFIKNLENSI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFS FGSILS KV +E G S+G+GFVHFET EAA K+I +NGMLLN + VF
Sbjct: 111 DNKALYDTFSTFGSILSSKVVYNEHG-SRGFGFVHFETHEAAQKAINTMNGMLLNDRKVF 169
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGK 241
VG F R++RE ELG +A FTN+Y+KN + ++++L+++F +G + S +VM +++G+
Sbjct: 170 VGHFKSRQKREAELGARALGFTNIYVKNLHANVDEQRLQDLFSQFGNMQSVKVMRDSNGQ 229
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
SRGFGFV +E E A+KAV NGKEV G++LYVGRAQK+AER ELKRRFE +K ER N
Sbjct: 230 SRGFGFVNFEKHEEAQKAVDHMNGKEVSGQLLYVGRAQKRAERQSELKRRFEQMKQERQN 289
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLYVKNLDDSI+DERL++ F+ +G ITSAK
Sbjct: 290 RYQGVNLYVKNLDDSINDERLKEVFSTYGVITSAK 324
Score = 161 bits (408), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 90/234 (38%), Positives = 137/234 (58%), Gaps = 20/234 (8%)
Query: 78 ERALDTMNFDALKGRPIRI----MWSQRDPSL--RKSGVGNVFIKNLDKSIDNKAMYDTF 131
++A++TMN L R + + +R+ L R G N+++KNL ++D + + D F
Sbjct: 152 QKAINTMNGMLLNDRKVFVGHFKSRQKREAELGARALGFTNIYVKNLHANVDEQRLQDLF 211
Query: 132 SAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKE 191
S FG++ S KV +D G S+G+GFV+FE E A K+++ +NG ++ ++++VG+ R E
Sbjct: 212 SQFGNMQSVKVMRDSNGQSRGFGFVNFEKHEEAQKAVDHMNGKEVSGQLLYVGRAQKRAE 271
Query: 192 REKELGEKAKLF----------TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDGK 241
R+ EL + + N+Y+KN + NDE+LKE+F YG ITS +VM
Sbjct: 272 RQSELKRRFEQMKQERQNRYQGVNLYVKNLDDSINDERLKEVFSTYGVITSAKVMTESSH 331
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAER----TQELKRR 291
S+GFGFV + SPE A KAV NG+ V K LYV AQ+K ER T + +RR
Sbjct: 332 SKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEERKAILTNQYRRR 385
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 122/228 (53%), Gaps = 17/228 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQD-EQGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + +Y+ FS G+ILS +V +D S GY +++F+ A +++
Sbjct: 10 LSSLYVGDLHPDVTESMLYEMFSPIGNILSIRVCRDVATRRSLGYAYINFQQPADAERAL 69
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N ++ G+ I ++ G + N++IKN +++ L + F +G
Sbjct: 70 DTMNFEVIK------GQPIRIMWSHRDPGLRKSGMGNIFIKNLENSIDNKALYDTFSTFG 123
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
+I S +V+ N+ SRGFGFV +E+ E A+KA+ NG ++ + ++VG + + +R EL
Sbjct: 124 SILSSKVVYNEHGSRGFGFVHFETHEAAQKAINTMNGMLLNDRKVFVGHFKSRQKREAEL 183
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
R N+YVKNL ++D++RL+ F+ FG + S K
Sbjct: 184 GARALGF----------TNIYVKNLHANVDEQRLQDLFSQFGNMQSVK 221
>gi|187956894|gb|AAI58031.1| 1810053B01Rik protein [Mus musculus]
Length = 607
Score = 354 bits (908), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 171/275 (62%), Positives = 216/275 (78%), Gaps = 4/275 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G + QP D ERALDTMNF+ +KG+PIRIMWS RDP LRKSG+GN+FIKNL+ SI
Sbjct: 53 GYAYINFQQP--ADAERALDTMNFEVIKGQPIRIMWSHRDPGLRKSGMGNIFIKNLENSI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFS FGSILS KV +E G S+G+GFVHFET EAA K+I +NGMLLN + VF
Sbjct: 111 DNKALYDTFSTFGSILSSKVVYNEHG-SRGFGFVHFETHEAAQKAINTMNGMLLNDRKVF 169
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGK 241
VG F R++RE ELG +A FTN+Y+KN + ++++L+++F +G + S +VM +++G+
Sbjct: 170 VGHFKSRQKREAELGARALGFTNIYVKNLHANVDEQRLQDLFSQFGNMQSVKVMRDSNGQ 229
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
SRGFGFV +E E A+KAV NGKEV G++LYVGRAQK+AER ELKRRFE +K ER N
Sbjct: 230 SRGFGFVNFEKHEEAQKAVDHMNGKEVSGQLLYVGRAQKRAERQSELKRRFEQMKQERQN 289
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLYVKNLDDSI+DERL++ F+ +G ITSAK
Sbjct: 290 RYQGVNLYVKNLDDSINDERLKEVFSTYGVITSAK 324
Score = 161 bits (407), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 90/234 (38%), Positives = 137/234 (58%), Gaps = 20/234 (8%)
Query: 78 ERALDTMNFDALKGRPIRI----MWSQRDPSL--RKSGVGNVFIKNLDKSIDNKAMYDTF 131
++A++TMN L R + + +R+ L R G N+++KNL ++D + + D F
Sbjct: 152 QKAINTMNGMLLNDRKVFVGHFKSRQKREAELGARALGFTNIYVKNLHANVDEQRLQDLF 211
Query: 132 SAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKE 191
S FG++ S KV +D G S+G+GFV+FE E A K+++ +NG ++ ++++VG+ R E
Sbjct: 212 SQFGNMQSVKVMRDSNGQSRGFGFVNFEKHEEAQKAVDHMNGKEVSGQLLYVGRAQKRAE 271
Query: 192 REKELGEKAKLF----------TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDGK 241
R+ EL + + N+Y+KN + NDE+LKE+F YG ITS +VM
Sbjct: 272 RQSELKRRFEQMKQERQNRYQGVNLYVKNLDDSINDERLKEVFSTYGVITSAKVMTESSH 331
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAER----TQELKRR 291
S+GFGFV + SPE A KAV NG+ V K LYV AQ+K ER T + +RR
Sbjct: 332 SKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEERKAILTNQYRRR 385
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 122/228 (53%), Gaps = 17/228 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQD-EQGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + +Y+ FS G+ILS +V +D S GY +++F+ A +++
Sbjct: 10 LSSLYVGDLHPDVTESMLYEMFSPIGNILSIRVCRDVATRRSLGYAYINFQQPADAERAL 69
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N ++ G+ I ++ G + N++IKN +++ L + F +G
Sbjct: 70 DTMNFEVIK------GQPIRIMWSHRDPGLRKSGMGNIFIKNLENSIDNKALYDTFSTFG 123
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
+I S +V+ N+ SRGFGFV +E+ E A+KA+ NG ++ + ++VG + + +R EL
Sbjct: 124 SILSSKVVYNEHGSRGFGFVHFETHEAAQKAINTMNGMLLNDRKVFVGHFKSRQKREAEL 183
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
R N+YVKNL ++D++RL+ F+ FG + S K
Sbjct: 184 GARALGF----------TNIYVKNLHANVDEQRLQDLFSQFGNMQSVK 221
>gi|341900148|gb|EGT56083.1| hypothetical protein CAEBREN_04295 [Caenorhabditis brenneri]
Length = 649
Score = 353 bits (907), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 182/280 (65%), Positives = 222/280 (79%), Gaps = 4/280 (1%)
Query: 59 QLGSGAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNL 118
+L G V QP D ERA+DTMNF+AL G+P+RIMWSQRDP++R+SG GN+FIKNL
Sbjct: 70 RLSLGYAYVNFQQP--ADAERAMDTMNFEALHGKPMRIMWSQRDPAMRRSGAGNIFIKNL 127
Query: 119 DKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNS 178
DK IDNK++YDTFS FG+ILSCKVA DE+G+SKGYGFVHFETEEAA +I+KVNGMLL
Sbjct: 128 DKVIDNKSIYDTFSLFGNILSCKVAIDEEGSSKGYGFVHFETEEAAQNAIQKVNGMLLAG 187
Query: 179 KIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN 238
K VFVGKF PR +R +ELGE AK +TNVY+KNFG+ +N E L+++F YGTITS VM +
Sbjct: 188 KKVFVGKFQPRAQRNRELGETAKKYTNVYVKNFGDHYNKESLEKLFAKYGTITSCDVMTS 247
Query: 239 DGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGK--ILYVGRAQKKAERTQELKRRFEMLK 296
DGKS+GFGFVA+ PE AE AVQA N V+G L+V RAQKK+ER ELK++ E K
Sbjct: 248 DGKSKGFGFVAFAEPEEAEAAVQALNDSPVEGSDLKLHVCRAQKKSERHAELKKKHEQHK 307
Query: 297 IERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ER+ +YQGVNLYVKNLD+S+DDE L+K+F FG ITSAK
Sbjct: 308 VERMQKYQGVNLYVKNLDESVDDEALKKQFESFGNITSAK 347
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 129/237 (54%), Gaps = 18/237 (7%)
Query: 101 RDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGN-SKGYGFVHFE 159
++P+ + ++++ +L ++ +++ FSA G +LS +V +D S GY +V+F+
Sbjct: 22 QNPTGSSYTMASLYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQ 81
Query: 160 TEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEK 219
A ++++ +N L+ K + + +++ + N++IKN + +++
Sbjct: 82 QPADAERAMDTMNFEALHGKPMRI------MWSQRDPAMRRSGAGNIFIKNLDKVIDNKS 135
Query: 220 LKEMFEPYGTITSYRV-MNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRA 278
+ + F +G I S +V ++ +G S+G+GFV +E+ E A+ A+Q NG + GK ++VG+
Sbjct: 136 IYDTFSLFGNILSCKVAIDEEGSSKGYGFVHFETEEAAQNAIQKVNGMLLAGKKVFVGKF 195
Query: 279 QKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSA 335
Q +A+R +EL E +Y N+YVKN D + E L K F +GTITS
Sbjct: 196 QPRAQRNRELG--------ETAKKY--TNVYVKNFGDHYNKESLEKLFAKYGTITSC 242
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/194 (35%), Positives = 106/194 (54%), Gaps = 14/194 (7%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV++KN + +++ F+ +G+I SC V + G SKG+GFV F E A +++ +
Sbjct: 214 NVYVKNFGDHYNKESLEKLFAKYGTITSCDVMTSD-GKSKGFGFVAFAEPEEAEAAVQAL 272
Query: 172 NGMLLNSK--IVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEK 219
N + + V + + ER EL +K + N+Y+KN E +DE
Sbjct: 273 NDSPVEGSDLKLHVCRAQKKSERHAELKKKHEQHKVERMQKYQGVNLYVKNLDESVDDEA 332
Query: 220 LKEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRA 278
LK+ FE +G ITS +VM ++ G+S+GFGFV +E PE A AV N K V K LYV A
Sbjct: 333 LKKQFESFGNITSAKVMTDENGRSKGFGFVCFEKPEEATTAVTEMNSKMVCSKPLYVALA 392
Query: 279 QKKAERTQELKRRF 292
Q+K +R +L ++
Sbjct: 393 QRKEDRRAQLASQY 406
>gi|268566587|ref|XP_002639761.1| C. briggsae CBR-PAB-1 protein [Caenorhabditis briggsae]
Length = 651
Score = 353 bits (905), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 182/280 (65%), Positives = 222/280 (79%), Gaps = 4/280 (1%)
Query: 59 QLGSGAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNL 118
+L G V QP D ERA+DTMNF+AL G+P+RIMWSQRDP++R+SG GN+FIKNL
Sbjct: 70 RLSLGYAYVNFQQP--ADAERAMDTMNFEALHGKPMRIMWSQRDPAMRRSGAGNIFIKNL 127
Query: 119 DKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNS 178
DK IDNK++YDTFS FG+ILSCKVA DE+G+SKGYGFVHFETEEAA +I+KVNGMLL
Sbjct: 128 DKVIDNKSIYDTFSLFGNILSCKVAIDEEGSSKGYGFVHFETEEAAQNAIQKVNGMLLAG 187
Query: 179 KIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN 238
K VFVGKF PR +R +ELGE AK FTNVY+KNFGE +N + L+++F YGTITS VM +
Sbjct: 188 KKVFVGKFQPRAQRNRELGETAKKFTNVYVKNFGEHYNKDTLEKLFAKYGTITSCDVMTS 247
Query: 239 DGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGK--ILYVGRAQKKAERTQELKRRFEMLK 296
+GKS+GFGFVA+ PE AE AVQA N V+G L+V RAQKK+ER ELK++ E K
Sbjct: 248 EGKSKGFGFVAFAEPEEAEAAVQALNDSPVEGSDLKLHVCRAQKKSERHAELKKKHEQHK 307
Query: 297 IERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ER+ +YQGVNLYVKNLD+S+DDE L+K+F FG ITSAK
Sbjct: 308 VERMQKYQGVNLYVKNLDESVDDEALKKQFESFGNITSAK 347
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/194 (36%), Positives = 105/194 (54%), Gaps = 14/194 (7%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV++KN + + + F+ +G+I SC V E G SKG+GFV F E A +++ +
Sbjct: 214 NVYVKNFGEHYNKDTLEKLFAKYGTITSCDVMTSE-GKSKGFGFVAFAEPEEAEAAVQAL 272
Query: 172 NGMLLNSK--IVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEK 219
N + + V + + ER EL +K + N+Y+KN E +DE
Sbjct: 273 NDSPVEGSDLKLHVCRAQKKSERHAELKKKHEQHKVERMQKYQGVNLYVKNLDESVDDEA 332
Query: 220 LKEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRA 278
LK+ FE +G ITS +VM ++ G+S+GFGFV +E PE A AV N K V K LYV A
Sbjct: 333 LKKQFESFGNITSAKVMTDENGRSKGFGFVCFEKPEEATTAVSEMNSKMVCSKPLYVALA 392
Query: 279 QKKAERTQELKRRF 292
Q+K +R +L ++
Sbjct: 393 QRKEDRRAQLASQY 406
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 129/237 (54%), Gaps = 18/237 (7%)
Query: 101 RDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGN-SKGYGFVHFE 159
++P+ + ++++ +L ++ +++ FSA G +LS +V +D S GY +V+F+
Sbjct: 22 QNPTGSSYTMASLYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQ 81
Query: 160 TEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEK 219
A ++++ +N L+ K + + +++ + N++IKN + +++
Sbjct: 82 QPADAERAMDTMNFEALHGKPMRI------MWSQRDPAMRRSGAGNIFIKNLDKVIDNKS 135
Query: 220 LKEMFEPYGTITSYRV-MNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRA 278
+ + F +G I S +V ++ +G S+G+GFV +E+ E A+ A+Q NG + GK ++VG+
Sbjct: 136 IYDTFSLFGNILSCKVAIDEEGSSKGYGFVHFETEEAAQNAIQKVNGMLLAGKKVFVGKF 195
Query: 279 QKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSA 335
Q +A+R +EL E ++ N+YVKN + + + L K F +GTITS
Sbjct: 196 QPRAQRNRELG--------ETAKKF--TNVYVKNFGEHYNKDTLEKLFAKYGTITSC 242
>gi|148674413|gb|EDL06360.1| mCG5434 [Mus musculus]
Length = 534
Score = 352 bits (904), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 171/275 (62%), Positives = 216/275 (78%), Gaps = 4/275 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G + QP D ERALDTMNF+ +KG+PIRIMWS RDP LRKSG+GN+FIKNL+ SI
Sbjct: 53 GYAYINFQQP--ADAERALDTMNFEVIKGQPIRIMWSHRDPGLRKSGMGNIFIKNLENSI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFS FGSILS KV +E G S+G+GFVHFET EAA K+I +NGMLLN + VF
Sbjct: 111 DNKALYDTFSTFGSILSSKVVYNEHG-SRGFGFVHFETHEAAQKAINTMNGMLLNDRKVF 169
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGK 241
VG F R++RE ELG +A FTN+Y+KN + ++++L+++F +G + S +VM +++G+
Sbjct: 170 VGHFKSRQKREAELGARALGFTNIYVKNLHANVDEQRLQDLFSQFGNMQSVKVMRDSNGQ 229
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
SRGFGFV +E E A+KAV NGKEV G++LYVGRAQK+AER ELKRRFE +K ER N
Sbjct: 230 SRGFGFVNFEKHEEAQKAVDHMNGKEVSGQLLYVGRAQKRAERQSELKRRFEQMKQERQN 289
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLYVKNLDDSI+DERL++ F+ +G ITSAK
Sbjct: 290 RYQGVNLYVKNLDDSINDERLKEVFSTYGVITSAK 324
Score = 160 bits (405), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 90/235 (38%), Positives = 137/235 (58%), Gaps = 20/235 (8%)
Query: 77 TERALDTMNFDALKGRPIRI----MWSQRDPSL--RKSGVGNVFIKNLDKSIDNKAMYDT 130
++A++TMN L R + + +R+ L R G N+++KNL ++D + + D
Sbjct: 151 AQKAINTMNGMLLNDRKVFVGHFKSRQKREAELGARALGFTNIYVKNLHANVDEQRLQDL 210
Query: 131 FSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRK 190
FS FG++ S KV +D G S+G+GFV+FE E A K+++ +NG ++ ++++VG+ R
Sbjct: 211 FSQFGNMQSVKVMRDSNGQSRGFGFVNFEKHEEAQKAVDHMNGKEVSGQLLYVGRAQKRA 270
Query: 191 EREKELGEKAKLF----------TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDG 240
ER+ EL + + N+Y+KN + NDE+LKE+F YG ITS +VM
Sbjct: 271 ERQSELKRRFEQMKQERQNRYQGVNLYVKNLDDSINDERLKEVFSTYGVITSAKVMTESS 330
Query: 241 KSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAER----TQELKRR 291
S+GFGFV + SPE A KAV NG+ V K LYV AQ+K ER T + +RR
Sbjct: 331 HSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEERKAILTNQYRRR 385
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 122/228 (53%), Gaps = 17/228 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQD-EQGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + +Y+ FS G+ILS +V +D S GY +++F+ A +++
Sbjct: 10 LSSLYVGDLHPDVTESMLYEMFSPIGNILSIRVCRDVATRRSLGYAYINFQQPADAERAL 69
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N ++ G+ I ++ G + N++IKN +++ L + F +G
Sbjct: 70 DTMNFEVIK------GQPIRIMWSHRDPGLRKSGMGNIFIKNLENSIDNKALYDTFSTFG 123
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
+I S +V+ N+ SRGFGFV +E+ E A+KA+ NG ++ + ++VG + + +R EL
Sbjct: 124 SILSSKVVYNEHGSRGFGFVHFETHEAAQKAINTMNGMLLNDRKVFVGHFKSRQKREAEL 183
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
R N+YVKNL ++D++RL+ F+ FG + S K
Sbjct: 184 GARALGF----------TNIYVKNLHANVDEQRLQDLFSQFGNMQSVK 221
>gi|354484923|ref|XP_003504635.1| PREDICTED: polyadenylate-binding protein 1-like [Cricetulus
griseus]
Length = 672
Score = 351 bits (901), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 173/275 (62%), Positives = 215/275 (78%), Gaps = 4/275 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G + QP D ERALDTMNF+ +KG+PIRIMWS RDP LRKSG+GN+FIKNL+ SI
Sbjct: 116 GYAYINFQQP--ADAERALDTMNFEMIKGQPIRIMWSHRDPGLRKSGMGNIFIKNLENSI 173
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFS FGSILS KV +E G S+G+GFVHFET EAA K+I +NGMLLN + VF
Sbjct: 174 DNKALYDTFSTFGSILSSKVVYNEHG-SRGFGFVHFETHEAAQKAINTMNGMLLNDRKVF 232
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGK 241
VG F R++RE ELG +A FTNVY+KN D +++ L+++F +G + S +VM +++G+
Sbjct: 233 VGHFKSRQKREAELGARALGFTNVYVKNLHMDMDEQGLQDLFSQFGKMQSVKVMRDSNGQ 292
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
SRGFGFV +E E A+KAV NGKEV G++LYVGRAQK+AER ELKRRFE +K ER N
Sbjct: 293 SRGFGFVNFEKHEEAQKAVDHMNGKEVRGQLLYVGRAQKRAERQSELKRRFEQVKQERQN 352
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLYVKNLDDSI+DERL++ F+ +G ITSAK
Sbjct: 353 RYQGVNLYVKNLDDSINDERLKEVFSAYGVITSAK 387
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 89/232 (38%), Positives = 132/232 (56%), Gaps = 16/232 (6%)
Query: 77 TERALDTMNFDALKGRPIRI----MWSQRDPSL--RKSGVGNVFIKNLDKSIDNKAMYDT 130
++A++TMN L R + + +R+ L R G NV++KNL +D + + D
Sbjct: 214 AQKAINTMNGMLLNDRKVFVGHFKSRQKREAELGARALGFTNVYVKNLHMDMDEQGLQDL 273
Query: 131 FSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRK 190
FS FG + S KV +D G S+G+GFV+FE E A K+++ +NG + ++++VG+ R
Sbjct: 274 FSQFGKMQSVKVMRDSNGQSRGFGFVNFEKHEEAQKAVDHMNGKEVRGQLLYVGRAQKRA 333
Query: 191 EREKELGEKAKLF----------TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDG 240
ER+ EL + + N+Y+KN + NDE+LKE+F YG ITS +VM
Sbjct: 334 ERQSELKRRFEQVKQERQNRYQGVNLYVKNLDDSINDERLKEVFSAYGVITSAKVMTESS 393
Query: 241 KSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRF 292
S+GFGFV + SPE A KAV NG+ V K LYV AQ+K ER L ++
Sbjct: 394 HSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEERKAILTNQY 445
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 136/275 (49%), Gaps = 38/275 (13%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G +L LG P++ AL+TM DP + + ++++ +L +
Sbjct: 47 GPVLELLGDPFL----GALNTM-----------------DPGGQACALSSLYVGDLHPDV 85
Query: 123 DNKAMYDTFSAFGSILSCKVAQD-EQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIV 181
+Y+ FS G+ILS +V +D S GY +++F+ A ++++ +N ++
Sbjct: 86 TEAMLYEMFSPIGTILSIRVCRDVATRRSLGYAYINFQQPADAERALDTMNFEMIK---- 141
Query: 182 FVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDGK 241
G+ I ++ G + N++IKN +++ L + F +G+I S +V+ N+
Sbjct: 142 --GQPIRIMWSHRDPGLRKSGMGNIFIKNLENSIDNKALYDTFSTFGSILSSKVVYNEHG 199
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
SRGFGFV +E+ E A+KA+ NG ++ + ++VG + + +R EL R
Sbjct: 200 SRGFGFVHFETHEAAQKAINTMNGMLLNDRKVFVGHFKSRQKREAELGARALGF------ 253
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
N+YVKNL +D++ L+ F+ FG + S K
Sbjct: 254 ----TNVYVKNLHMDMDEQGLQDLFSQFGKMQSVK 284
>gi|432102762|gb|ELK30241.1| Polyadenylate-binding protein 1-like protein [Myotis davidii]
Length = 603
Score = 351 bits (901), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 176/278 (63%), Positives = 215/278 (77%), Gaps = 7/278 (2%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G + QP D E ALDTMNF+ +KG+PIRIMWSQRDP LRKSGVGN+FIKNL++SI
Sbjct: 53 GYAYINFQQPA--DAELALDTMNFEVIKGQPIRIMWSQRDPGLRKSGVGNIFIKNLEESI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFS FG+ILSCKV D+ G S+G+GFVHFET EAA ++I +NGMLLN++ VF
Sbjct: 111 DNKALYDTFSTFGNILSCKVVCDDHG-SRGFGFVHFETREAAQQAISTMNGMLLNNRKVF 169
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GK 241
V F R+ERE ELG +A FTNVY+KN D +++ L+E+F +G S +VM +D G
Sbjct: 170 VSHFKSRQEREAELGVRAMEFTNVYVKNLQMDIDEQGLEELFSQFGKTLSVKVMRDDSGH 229
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFE---MLKIE 298
SRGFGFV +E E A+KAV NGKEV G++LYVGRAQK AER ELKR+F+ +K +
Sbjct: 230 SRGFGFVNFEKHEEAQKAVMDMNGKEVRGQLLYVGRAQKWAERQNELKRKFQQMKQMKQD 289
Query: 299 RLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RLN YQGVNLYVKNLDDSID+ERLRKEF+P+G ITSAK
Sbjct: 290 RLNHYQGVNLYVKNLDDSIDNERLRKEFSPYGVITSAK 327
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 87/235 (37%), Positives = 130/235 (55%), Gaps = 19/235 (8%)
Query: 77 TERALDTMNFDALKGRPIRIMW----SQRDPSL--RKSGVGNVFIKNLDKSIDNKAMYDT 130
++A+ TMN L R + + +R+ L R NV++KNL ID + + +
Sbjct: 151 AQQAISTMNGMLLNNRKVFVSHFKSRQEREAELGVRAMEFTNVYVKNLQMDIDEQGLEEL 210
Query: 131 FSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRK 190
FS FG LS KV +D+ G+S+G+GFV+FE E A K++ +NG + ++++VG+
Sbjct: 211 FSQFGKTLSVKVMRDDSGHSRGFGFVNFEKHEEAQKAVMDMNGKEVRGQLLYVGRAQKWA 270
Query: 191 EREKELGEKAKLF-------------TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMN 237
ER+ EL K + N+Y+KN + ++E+L++ F PYG ITS +VM
Sbjct: 271 ERQNELKRKFQQMKQMKQDRLNHYQGVNLYVKNLDDSIDNERLRKEFSPYGVITSAKVMT 330
Query: 238 NDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRF 292
G S+GFGFV + SPE A KAV NG + K LYV AQ+K ER L +F
Sbjct: 331 EGGHSKGFGFVCFSSPEEATKAVTEMNGCILGTKPLYVALAQRKDERKAILTNQF 385
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 118/228 (51%), Gaps = 17/228 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQD-EQGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + +Y+ FS G ILS +V +D S GY +++F+ A ++
Sbjct: 10 LASLYVGDLHPDVTEAMLYEKFSLAGPILSIRVCRDVATRRSLGYAYINFQQPADAELAL 69
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N ++ G+ I +++ G + N++IKN E +++ L + F +G
Sbjct: 70 DTMNFEVIK------GQPIRIMWSQRDPGLRKSGVGNIFIKNLEESIDNKALYDTFSTFG 123
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S +V+ +D SRGFGFV +E+ E A++A+ NG ++ + ++V + + ER EL
Sbjct: 124 NILSCKVVCDDHGSRGFGFVHFETREAAQQAISTMNGMLLNNRKVFVSHFKSRQEREAEL 183
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
R + N+YVKNL ID++ L + F+ FG S K
Sbjct: 184 GVR----------AMEFTNVYVKNLQMDIDEQGLEELFSQFGKTLSVK 221
>gi|7689377|gb|AAF67755.1|AF255335_1 poly(A)-binding protein [Spisula solidissima]
Length = 286
Score = 351 bits (900), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 176/241 (73%), Positives = 200/241 (82%), Gaps = 2/241 (0%)
Query: 97 MWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFV 156
MWSQRDPSLRKSGVGNVFIKNLDKSIDNKA+YDTFSAFG+ILSCK+ DE G S+GYGFV
Sbjct: 1 MWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKIVSDEHG-SRGYGFV 59
Query: 157 HFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFN 216
HFETEEAA +IEKVNGMLLN K VFVG+F+ R+ER +++G+K K F NVYIKNF E+ +
Sbjct: 60 HFETEEAARNAIEKVNGMLLNGKKVFVGRFMNRRERLEQMGDKMKKFNNVYIKNFSEEID 119
Query: 217 DEKLKEMFEPYGTITSYRVMNN-DGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYV 275
DEKLK FE +G I S +VM DGK RGFGFV+YE PE AEKAV N K + K LYV
Sbjct: 120 DEKLKIWFETFGKIISAKVMTGYDGKGRGFGFVSYEEPEAAEKAVTEMNNKTFEEKTLYV 179
Query: 276 GRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSA 335
GRAQK+AER ELK +F+ LK ER+NRYQGVNLYVKNLDDSIDDE+LRKEF+ FGTITSA
Sbjct: 180 GRAQKRAERQAELKDKFDRLKQERMNRYQGVNLYVKNLDDSIDDEKLRKEFSAFGTITSA 239
Query: 336 K 336
K
Sbjct: 240 K 240
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 72/179 (40%), Positives = 104/179 (58%), Gaps = 10/179 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV+IKN + ID++ + F FG I+S KV G +G+GFV +E EAA K++ ++
Sbjct: 108 NVYIKNFSEEIDDEKLKIWFETFGKIISAKVMTGYDGKGRGFGFVSYEEPEAAEKAVTEM 167
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKLK 221
N K ++VG+ R ER+ EL +K N+Y+KN + +DEKL+
Sbjct: 168 NNKTFEEKTLYVGRAQKRAERQAELKDKFDRLKQERMNRYQGVNLYVKNLDDSIDDEKLR 227
Query: 222 EMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
+ F +GTITS +VM G+S+GFGFV + SPE A KAV NG+ + K LYV AQ+
Sbjct: 228 KEFSAFGTITSAKVMTEGGRSKGFGFVCFSSPEEATKAVTEMNGRIIVAKPLYVALAQR 286
>gi|392346932|ref|XP_230831.6| PREDICTED: poly(A) binding protein, cytoplasmic 1-like [Rattus
norvegicus]
Length = 609
Score = 349 bits (896), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 169/275 (61%), Positives = 214/275 (77%), Gaps = 4/275 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G + QP D ERALDTMNF+ +KG+PIRIMWS RDP LR+SG+GN+FIKNL+ SI
Sbjct: 53 GYAYINFQQP--ADAERALDTMNFEMIKGQPIRIMWSHRDPGLRRSGMGNIFIKNLENSI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFS FGSILS KV +E G S+G+GFVHFET EAA K+I +NGMLLN + VF
Sbjct: 111 DNKALYDTFSTFGSILSSKVVYNEHG-SRGFGFVHFETHEAAQKAINTMNGMLLNDRKVF 169
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGK 241
VG F R++RE ELG +A FTN+Y+KN D +++ L+++F +G S +VM +++G+
Sbjct: 170 VGHFKSRQKREAELGARALGFTNIYVKNLRVDMDEQGLQDLFSQFGKTQSVKVMRDSNGQ 229
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
SRGFGF+ +E E A+KAV NGKEV G++LYVGRAQK+AER ELKRRFE +K ER N
Sbjct: 230 SRGFGFINFEKHEEAQKAVDHMNGKEVSGQLLYVGRAQKRAERQNELKRRFEQMKQERQN 289
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLYVKNLDDSI+D+RL++ F+ +G ITSAK
Sbjct: 290 RYQGVNLYVKNLDDSINDDRLKEVFSTYGVITSAK 324
Score = 157 bits (396), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 88/235 (37%), Positives = 134/235 (57%), Gaps = 20/235 (8%)
Query: 78 ERALDTMNFDALKGRPIRI----MWSQRDPSL--RKSGVGNVFIKNLDKSIDNKAMYDTF 131
++A++TMN L R + + +R+ L R G N+++KNL +D + + D F
Sbjct: 152 QKAINTMNGMLLNDRKVFVGHFKSRQKREAELGARALGFTNIYVKNLRVDMDEQGLQDLF 211
Query: 132 SAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKE 191
S FG S KV +D G S+G+GF++FE E A K+++ +NG ++ ++++VG+ R E
Sbjct: 212 SQFGKTQSVKVMRDSNGQSRGFGFINFEKHEEAQKAVDHMNGKEVSGQLLYVGRAQKRAE 271
Query: 192 REKELGEKAKLF----------TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDGK 241
R+ EL + + N+Y+KN + ND++LKE+F YG ITS +VM
Sbjct: 272 RQNELKRRFEQMKQERQNRYQGVNLYVKNLDDSINDDRLKEVFSTYGVITSAKVMTESSH 331
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAER----TQELKRRF 292
S+GFGFV + SPE A KAV NG+ V K LYV AQ+K ER T + +RR
Sbjct: 332 SKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEERKAILTNQYRRRL 386
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 119/228 (52%), Gaps = 17/228 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQD-EQGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + +Y+ FS G+ILS +V +D S GY +++F+ A +++
Sbjct: 10 LSSLYVGDLHPDVTEAMLYEMFSPIGTILSIRVCRDVATRRSLGYAYINFQQPADAERAL 69
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N ++ G+ I ++ G + N++IKN +++ L + F +G
Sbjct: 70 DTMNFEMIK------GQPIRIMWSHRDPGLRRSGMGNIFIKNLENSIDNKALYDTFSTFG 123
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
+I S +V+ N+ SRGFGFV +E+ E A+KA+ NG ++ + ++VG + + +R EL
Sbjct: 124 SILSSKVVYNEHGSRGFGFVHFETHEAAQKAINTMNGMLLNDRKVFVGHFKSRQKREAEL 183
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
R N+YVKNL +D++ L+ F+ FG S K
Sbjct: 184 GARALGF----------TNIYVKNLRVDMDEQGLQDLFSQFGKTQSVK 221
>gi|384496545|gb|EIE87036.1| hypothetical protein RO3G_11747 [Rhizopus delemar RA 99-880]
Length = 616
Score = 348 bits (894), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 165/264 (62%), Positives = 212/264 (80%), Gaps = 1/264 (0%)
Query: 74 MLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSA 133
++D ERAL+++N+ +KG+P RIMWSQRDPSLRK+G GNVFIKNLD SIDNKA++DTFSA
Sbjct: 90 IVDGERALESLNYTLIKGKPCRIMWSQRDPSLRKTGSGNVFIKNLDTSIDNKALHDTFSA 149
Query: 134 FGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKERE 193
FG+ILSCK+A DE GNSKGYGFVH+ETEEAA+ +I+ V+GMLLN K V+VG+ IPRKER+
Sbjct: 150 FGNILSCKIALDESGNSKGYGFVHYETEEAADNAIKHVDGMLLNDKKVYVGRHIPRKERQ 209
Query: 194 KELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGKSRGFGFVAYES 252
++ + FTNVY+KN E NDE+ KEMF +G ITS V + +GKS+GFGF+ +E+
Sbjct: 210 AKIEQIRAKFTNVYVKNLDESINDEQFKEMFSKFGPITSALVQTDEEGKSKGFGFINFEN 269
Query: 253 PEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKN 312
E A KAV N E +GK LYV RAQKK ER +EL++++E K+E+L +YQGVNLY+KN
Sbjct: 270 YEDAHKAVDTLNETEHNGKTLYVARAQKKTEREEELRKQYEQAKLEKLAKYQGVNLYIKN 329
Query: 313 LDDSIDDERLRKEFTPFGTITSAK 336
LDD IDDE+LR+EF+ +G ITSAK
Sbjct: 330 LDDDIDDEKLRQEFSVYGVITSAK 353
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 85/208 (40%), Positives = 130/208 (62%), Gaps = 13/208 (6%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV++KNLD+SI+++ + FS FG I S V DE+G SKG+GF++FE E A+K+++ +
Sbjct: 221 NVYVKNLDESINDEQFKEMFSKFGPITSALVQTDEEGKSKGFGFINFENYEDAHKAVDTL 280
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELG---EKAKL-------FTNVYIKNFGEDFNDEKLK 221
N N K ++V + + ERE+EL E+AKL N+YIKN +D +DEKL+
Sbjct: 281 NETEHNGKTLYVARAQKKTEREEELRKQYEQAKLEKLAKYQGVNLYIKNLDDDIDDEKLR 340
Query: 222 EMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
+ F YG ITS +VM ++ G S+GFGFV + SP+ A KAV NG+ + K +YV AQ+
Sbjct: 341 QEFSVYGVITSAKVMCDEKGTSKGFGFVCFSSPDEATKAVTEMNGRMIGSKPIYVALAQR 400
Query: 281 KAERTQELKRRFEMLKIERLNRYQGVNL 308
K R +L+ +M + ++ QG+ +
Sbjct: 401 KEVRRSQLEA--QMAQRNQMRMQQGMPM 426
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/235 (31%), Positives = 127/235 (54%), Gaps = 18/235 (7%)
Query: 103 PSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETE 161
P+ S ++++ LD S+ +++ F+ G + S +V +D S GY +V+F
Sbjct: 31 PAGAPSPSASLYVGELDPSVTEAMLFEMFNMIGPVASIRVCRDAVTRRSLGYAYVNFHNI 90
Query: 162 EAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLK 221
+++E +N L+ K I +R+ L + NV+IKN +++ L
Sbjct: 91 VDGERALESLNYTLIKGKPC----RIMWSQRDPSLRKTGS--GNVFIKNLDTSIDNKALH 144
Query: 222 EMFEPYGTITSYRV-MNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
+ F +G I S ++ ++ G S+G+GFV YE+ E A+ A++ +G ++ K +YVGR
Sbjct: 145 DTFSAFGNILSCKIALDESGNSKGYGFVHYETEEAADNAIKHVDGMLLNDKKVYVGRHIP 204
Query: 281 KAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSA 335
+ ER KIE++ R + N+YVKNLD+SI+DE+ ++ F+ FG ITSA
Sbjct: 205 RKER---------QAKIEQI-RAKFTNVYVKNLDESINDEQFKEMFSKFGPITSA 249
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 82/148 (55%), Gaps = 22/148 (14%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQ----RDPSLRKS-------------GVGNVFIKNL 118
D +A+DT+N G+ + + +Q R+ LRK GV N++IKNL
Sbjct: 272 DAHKAVDTLNETEHNGKTLYVARAQKKTEREEELRKQYEQAKLEKLAKYQGV-NLYIKNL 330
Query: 119 DKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNS 178
D ID++ + FS +G I S KV DE+G SKG+GFV F + + A K++ ++NG ++ S
Sbjct: 331 DDDIDDEKLRQEFSVYGVITSAKVMCDEKGTSKGFGFVCFSSPDEATKAVTEMNGRMIGS 390
Query: 179 KIVFVG----KFIPRKEREKELGEKAKL 202
K ++V K + R + E ++ ++ ++
Sbjct: 391 KPIYVALAQRKEVRRSQLEAQMAQRNQM 418
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 60/135 (44%), Gaps = 18/135 (13%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQ 261
++Y+ + L EMF G + S RV + +S G+ +V + + E+A++
Sbjct: 39 ASLYVGELDPSVTEAMLFEMFNMIGPVASIRVCRDAVTRRSLGYAYVNFHNIVDGERALE 98
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDER 321
+ N + GK + +Q+ L + N+++KNLD SID++
Sbjct: 99 SLNYTLIKGKPCRIMWSQRDPS----------------LRKTGSGNVFIKNLDTSIDNKA 142
Query: 322 LRKEFTPFGTITSAK 336
L F+ FG I S K
Sbjct: 143 LHDTFSAFGNILSCK 157
>gi|384493509|gb|EIE84000.1| hypothetical protein RO3G_08705 [Rhizopus delemar RA 99-880]
Length = 624
Score = 347 bits (889), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 165/264 (62%), Positives = 211/264 (79%), Gaps = 1/264 (0%)
Query: 74 MLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSA 133
++D ERAL+++N+ +KG+P RIMWSQRDPSLRK+G GNVFIKNLD SIDNKA++DTFSA
Sbjct: 95 IVDGERALESLNYTLIKGKPCRIMWSQRDPSLRKTGSGNVFIKNLDPSIDNKALHDTFSA 154
Query: 134 FGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKERE 193
FG+ILSCK+A DE GNSKGYGFVH+ETEEAA+ +I+ VNGMLLN K V+VG+ +P+KER+
Sbjct: 155 FGNILSCKIALDESGNSKGYGFVHYETEEAADNAIKHVNGMLLNDKKVYVGRHVPKKERQ 214
Query: 194 KELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GKSRGFGFVAYES 252
++ + FTNVY+KN E DE+ EM +G ITS V +D GKS+GFGFV +E+
Sbjct: 215 AKIEQFRAKFTNVYVKNLDESVKDEEFNEMLAKFGPITSALVQTDDEGKSKGFGFVNFEN 274
Query: 253 PEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKN 312
E A+KAV A N E GKILYV RAQKK ER +EL++++E K+E+L +YQGVNLY+KN
Sbjct: 275 HEDAQKAVDALNETEHKGKILYVARAQKKTEREEELRKQYEQAKLEKLAKYQGVNLYIKN 334
Query: 313 LDDSIDDERLRKEFTPFGTITSAK 336
LDD IDDE+LR+EF+ +G ITSAK
Sbjct: 335 LDDDIDDEKLRQEFSVYGVITSAK 358
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/208 (38%), Positives = 126/208 (60%), Gaps = 13/208 (6%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV++KNLD+S+ ++ + + FG I S V D++G SKG+GFV+FE E A K+++ +
Sbjct: 226 NVYVKNLDESVKDEEFNEMLAKFGPITSALVQTDDEGKSKGFGFVNFENHEDAQKAVDAL 285
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELG---EKAKL-------FTNVYIKNFGEDFNDEKLK 221
N KI++V + + ERE+EL E+AKL N+YIKN +D +DEKL+
Sbjct: 286 NETEHKGKILYVARAQKKTEREEELRKQYEQAKLEKLAKYQGVNLYIKNLDDDIDDEKLR 345
Query: 222 EMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
+ F YG ITS +VM ++ S+GFGFV + SP+ A KAV NG+ + K +YV AQ+
Sbjct: 346 QEFSVYGVITSAKVMCDEKDTSKGFGFVCFSSPDEATKAVTEMNGRMIGSKPIYVALAQR 405
Query: 281 KAERTQELKRRFEMLKIERLNRYQGVNL 308
K R +L+ +M + ++ QG+ +
Sbjct: 406 KEIRRSQLEA--QMAQRNQMRMQQGMPM 431
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 72/235 (30%), Positives = 120/235 (51%), Gaps = 18/235 (7%)
Query: 103 PSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETE 161
P+ ++++ LD S+ +++ F+ G + S +V +D S GY +V+F
Sbjct: 36 PAGTAPPSASLYVGELDPSVTEAMLFEMFNMIGPVASIRVCRDAVTRRSLGYAYVNFHNI 95
Query: 162 EAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLK 221
+++E +N L+ K I +R+ L + NV+IKN +++ L
Sbjct: 96 VDGERALESLNYTLIKGKPC----RIMWSQRDPSLRKTGS--GNVFIKNLDPSIDNKALH 149
Query: 222 EMFEPYGTITSYRV-MNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
+ F +G I S ++ ++ G S+G+GFV YE+ E A+ A++ NG ++ K +YVGR
Sbjct: 150 DTFSAFGNILSCKIALDESGNSKGYGFVHYETEEAADNAIKHVNGMLLNDKKVYVGRHVP 209
Query: 281 KAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSA 335
K ER KIE+ R + N+YVKNLD+S+ DE + FG ITSA
Sbjct: 210 KKER---------QAKIEQF-RAKFTNVYVKNLDESVKDEEFNEMLAKFGPITSA 254
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 82/148 (55%), Gaps = 22/148 (14%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQ----RDPSLRKS-------------GVGNVFIKNL 118
D ++A+D +N KG+ + + +Q R+ LRK GV N++IKNL
Sbjct: 277 DAQKAVDALNETEHKGKILYVARAQKKTEREEELRKQYEQAKLEKLAKYQGV-NLYIKNL 335
Query: 119 DKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNS 178
D ID++ + FS +G I S KV DE+ SKG+GFV F + + A K++ ++NG ++ S
Sbjct: 336 DDDIDDEKLRQEFSVYGVITSAKVMCDEKDTSKGFGFVCFSSPDEATKAVTEMNGRMIGS 395
Query: 179 KIVFVG----KFIPRKEREKELGEKAKL 202
K ++V K I R + E ++ ++ ++
Sbjct: 396 KPIYVALAQRKEIRRSQLEAQMAQRNQM 423
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 60/135 (44%), Gaps = 18/135 (13%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQ 261
++Y+ + L EMF G + S RV + +S G+ +V + + E+A++
Sbjct: 44 ASLYVGELDPSVTEAMLFEMFNMIGPVASIRVCRDAVTRRSLGYAYVNFHNIVDGERALE 103
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDER 321
+ N + GK + +Q+ L + N+++KNLD SID++
Sbjct: 104 SLNYTLIKGKPCRIMWSQRDPS----------------LRKTGSGNVFIKNLDPSIDNKA 147
Query: 322 LRKEFTPFGTITSAK 336
L F+ FG I S K
Sbjct: 148 LHDTFSAFGNILSCK 162
>gi|431894424|gb|ELK04224.1| Polyadenylate-binding protein 1-like protein [Pteropus alecto]
Length = 512
Score = 347 bits (889), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 176/282 (62%), Positives = 214/282 (75%), Gaps = 11/282 (3%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G + QP D ERALDTMNF+ +KG+PIRIMWSQRDP LRKSGVGN+FIKNL+ SI
Sbjct: 53 GYAYINFQQP--ADAERALDTMNFEVIKGQPIRIMWSQRDPGLRKSGVGNIFIKNLEDSI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFS FG+ILSCKV D+ G S+G+GFVHFET EAA +I +NGMLLN + VF
Sbjct: 111 DNKALYDTFSTFGNILSCKVVCDDHG-SRGFGFVHFETHEAAQLAISTMNGMLLNDRKVF 169
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPY-----GTITSYRVMN 237
VG F R+ERE ELG +A FTN+Y+KN D ++ L+E+F + G + S +VM
Sbjct: 170 VGHFKSRQEREAELGARAMEFTNIYVKNLQVDMDEWGLQELFSQFDWSSPGKMLSVKVMR 229
Query: 238 ND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLK 296
+D G SRGFGFV +E E A+KAV NGKEV G++LYVGRAQK+ ER ELKR+FE +K
Sbjct: 230 DDSGHSRGFGFVNFEKHEEAQKAVMDMNGKEVRGRLLYVGRAQKRMERQNELKRKFEQMK 289
Query: 297 IERLNRYQ--GVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+RLNRY GVNLYVKNLDDSI+DE+LRKEF+P+G ITSAK
Sbjct: 290 QDRLNRYHVRGVNLYVKNLDDSINDEKLRKEFSPYGMITSAK 331
Score = 147 bits (371), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 80/198 (40%), Positives = 116/198 (58%), Gaps = 17/198 (8%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAF-----GSILSCKVAQDEQGNSKGYGFVHFETEEAANK 166
N+++KNL +D + + FS F G +LS KV +D+ G+S+G+GFV+FE E A K
Sbjct: 192 NIYVKNLQVDMDEWGLQELFSQFDWSSPGKMLSVKVMRDDSGHSRGFGFVNFEKHEEAQK 251
Query: 167 SIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLF------------TNVYIKNFGED 214
++ +NG + ++++VG+ R ER+ EL K + N+Y+KN +
Sbjct: 252 AVMDMNGKEVRGRLLYVGRAQKRMERQNELKRKFEQMKQDRLNRYHVRGVNLYVKNLDDS 311
Query: 215 FNDEKLKEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILY 274
NDEKL++ F PYG ITS +VM G S+GFGFV + SPE A KAV NG+ V K LY
Sbjct: 312 INDEKLRKEFSPYGMITSAKVMTEGGHSKGFGFVCFSSPEEATKAVTEMNGRIVGTKPLY 371
Query: 275 VGRAQKKAERTQELKRRF 292
V AQ+K ER L ++
Sbjct: 372 VALAQRKEERKAILTNQY 389
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 116/221 (52%), Gaps = 17/221 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQD-EQGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + +Y+ FS G ILS +V +D S GY +++F+ A +++
Sbjct: 10 LASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERAL 69
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N ++ G+ I +++ G + N++IKN + +++ L + F +G
Sbjct: 70 DTMNFEVIK------GQPIRIMWSQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFG 123
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S +V+ +D SRGFGFV +E+ E A+ A+ NG ++ + ++VG + + ER EL
Sbjct: 124 NILSCKVVCDDHGSRGFGFVHFETHEAAQLAISTMNGMLLNDRKVFVGHFKSRQEREAEL 183
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPF 329
R + N+YVKNL +D+ L++ F+ F
Sbjct: 184 GAR----------AMEFTNIYVKNLQVDMDEWGLQELFSQF 214
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 66/137 (48%), Gaps = 20/137 (14%)
Query: 203 FTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDG--KSRGFGFVAYESPEFAEKAV 260
++Y+ + D + L E F P G I S RV + +S G+ ++ ++ P AE+A+
Sbjct: 10 LASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERAL 69
Query: 261 QAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGV-NLYVKNLDDSIDD 319
N + + G+ + + +Q+ R GV N+++KNL+DSID+
Sbjct: 70 DTMNFEVIKGQPIRIMWSQRDPGL-----------------RKSGVGNIFIKNLEDSIDN 112
Query: 320 ERLRKEFTPFGTITSAK 336
+ L F+ FG I S K
Sbjct: 113 KALYDTFSTFGNILSCK 129
>gi|341884731|gb|EGT40666.1| CBN-PAB-2 protein [Caenorhabditis brenneri]
Length = 707
Score = 345 bits (886), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 174/281 (61%), Positives = 210/281 (74%), Gaps = 5/281 (1%)
Query: 59 QLGSGAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNL 118
+L G V QP D ERALDTMNF+ + GRP+RIMWSQRDP+ R++G GN+FIKNL
Sbjct: 100 RLSLGYAYVNFQQP--ADAERALDTMNFEIIHGRPMRIMWSQRDPAARRAGNGNIFIKNL 157
Query: 119 DKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNS 178
D+ IDNK++YDTFS FG+ILSCKVA D+ GNSKGYGFVHFETE +A +IEKVNGMLL+
Sbjct: 158 DRVIDNKSIYDTFSLFGNILSCKVATDDDGNSKGYGFVHFETEASAQTAIEKVNGMLLSD 217
Query: 179 KIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN 238
K VFVGKF PR +R KELGE +TNV++KNFGE ++ KLKEMF YG I S VM +
Sbjct: 218 KKVFVGKFQPRAQRMKELGESGLKYTNVFVKNFGEHLDEAKLKEMFSKYGEINSAVVMTD 277
Query: 239 -DGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGK--ILYVGRAQKKAERTQELKRRFEML 295
+GK +GFGFVAY PE A KAV N ++G L V RAQKK+ER+ ELKR++E L
Sbjct: 278 AEGKPKGFGFVAYADPEAASKAVDDLNESILEGTELKLSVCRAQKKSERSAELKRKYEAL 337
Query: 296 KIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
K ER+ RYQGVNLYVKN+++ + DE LR F FGTITSAK
Sbjct: 338 KQERVQRYQGVNLYVKNIEEELTDEGLRAHFAQFGTITSAK 378
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/209 (36%), Positives = 115/209 (55%), Gaps = 15/209 (7%)
Query: 99 SQRDPSLRKSGV--GNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFV 156
+QR L +SG+ NVF+KN + +D + + FS +G I S V D +G KG+GFV
Sbjct: 229 AQRMKELGESGLKYTNVFVKNFGEHLDEAKLKEMFSKYGEINSAVVMTDAEGKPKGFGFV 288
Query: 157 HFETEEAANKSIEKVNGMLLNSK--IVFVGKFIPRKEREKELGEKAKLF----------T 204
+ EAA+K+++ +N +L + V + + ER EL K +
Sbjct: 289 AYADPEAASKAVDDLNESILEGTELKLSVCRAQKKSERSAELKRKYEALKQERVQRYQGV 348
Query: 205 NVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPEFAEKAVQAW 263
N+Y+KN E+ DE L+ F +GTITS +VM + +G+S+GFGFV +E PE A AV
Sbjct: 349 NLYVKNIEEELTDEGLRAHFAQFGTITSAKVMVDENGRSKGFGFVCFEKPEEATAAVTEM 408
Query: 264 NGKEVDGKILYVGRAQKKAERTQELKRRF 292
N K + K LYV AQ+K +R +L ++
Sbjct: 409 NSKMIGAKPLYVALAQRKEDRRAQLASQY 437
>gi|268581545|ref|XP_002645756.1| C. briggsae CBR-PAB-2 protein [Caenorhabditis briggsae]
Length = 685
Score = 345 bits (885), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 174/281 (61%), Positives = 212/281 (75%), Gaps = 5/281 (1%)
Query: 59 QLGSGAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNL 118
+L G V QP D ERALDTMNF+ + GRP+RIMWSQRDP+ R++G GN+FIKNL
Sbjct: 90 RLSLGYAYVNFQQP--ADAERALDTMNFETIHGRPMRIMWSQRDPAARRAGNGNIFIKNL 147
Query: 119 DKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNS 178
D+ IDNK++YDTFS FG+ILSCKVA DE G+S+GYGFVHFETEE+A +IEKVNGMLL+
Sbjct: 148 DRVIDNKSIYDTFSLFGNILSCKVAADEDGSSRGYGFVHFETEESAQIAIEKVNGMLLSG 207
Query: 179 KIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN 238
K V+VGKF R +R KELGE +TNV++KNFGE + EKL +MF YG ITS VM +
Sbjct: 208 KKVYVGKFQTRAQRLKELGESGLKYTNVFVKNFGEHLDQEKLTKMFSKYGEITSAVVMTD 267
Query: 239 -DGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGK--ILYVGRAQKKAERTQELKRRFEML 295
DGK +GFGFVAY P+ A+KAV N K ++G L V RAQKK+ERT +LKR++E L
Sbjct: 268 ADGKPKGFGFVAYADPDAAQKAVDDLNEKTLEGTDLKLSVCRAQKKSERTADLKRKYEAL 327
Query: 296 KIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
K ER+ RYQGVNLYVKN+D+ + DE LR F FGTITSAK
Sbjct: 328 KQERVQRYQGVNLYVKNIDEELTDEGLRAHFASFGTITSAK 368
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/247 (33%), Positives = 128/247 (51%), Gaps = 20/247 (8%)
Query: 80 ALDTMNFDALKGRPIRI----MWSQRDPSLRKSGV--GNVFIKNLDKSIDNKAMYDTFSA 133
A++ +N L G+ + + +QR L +SG+ NVF+KN + +D + + FS
Sbjct: 196 AIEKVNGMLLSGKKVYVGKFQTRAQRLKELGESGLKYTNVFVKNFGEHLDQEKLTKMFSK 255
Query: 134 FGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSK--IVFVGKFIPRKE 191
+G I S V D G KG+GFV + +AA K+++ +N L + V + + E
Sbjct: 256 YGEITSAVVMTDADGKPKGFGFVAYADPDAAQKAVDDLNEKTLEGTDLKLSVCRAQKKSE 315
Query: 192 REKELGEKAKLF----------TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDG 240
R +L K + N+Y+KN E+ DE L+ F +GTITS +VM + +G
Sbjct: 316 RTADLKRKYEALKQERVQRYQGVNLYVKNIDEELTDEGLRAHFASFGTITSAKVMVDENG 375
Query: 241 KSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERL 300
+S+GFGFV +E PE A AV N K + K LYV AQ+K +R +L ++ M K+ L
Sbjct: 376 RSKGFGFVCFEKPEEATAAVTEMNSKMMGSKPLYVALAQRKEDRRAQLASQY-MQKLATL 434
Query: 301 NRYQGVN 307
Q N
Sbjct: 435 RMGQQTN 441
>gi|313218343|emb|CBY41581.1| unnamed protein product [Oikopleura dioica]
Length = 613
Score = 345 bits (884), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 170/262 (64%), Positives = 210/262 (80%), Gaps = 1/262 (0%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D ERA+DTMNFD LKG+ IRIMWSQRDP+LRKSGVGN+FIKNLDK+IDNK +YDTFSAFG
Sbjct: 64 DAERAIDTMNFDELKGKAIRIMWSQRDPALRKSGVGNIFIKNLDKTIDNKMLYDTFSAFG 123
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCKV + G SKGYGFVHFETEEAA K+IEK++GML+N K VFVG+F R ER +E
Sbjct: 124 NILSCKVNVNLAGESKGYGFVHFETEEAAVKAIEKLDGMLMNDKKVFVGRFKSRGERVRE 183
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPE 254
G++AK FTNV+IKN +++D KL E+F +G++ S + ++ GKSR FGFV++E+ E
Sbjct: 184 YGDRAKQFTNVFIKNLPAEWDDAKLTEVFGEHGSVMSVALATDENGKSRQFGFVSFETHE 243
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
AEK V+ + KE +GK ++VGRAQKKAER ELK +FE LK ER RYQGVNLYVKNLD
Sbjct: 244 CAEKVVEKLHDKEFEGKKIFVGRAQKKAERQAELKVKFEKLKHERNQRYQGVNLYVKNLD 303
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
DSI D+ LR+ F P+G ITS+K
Sbjct: 304 DSITDDILREHFAPYGNITSSK 325
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 77/195 (39%), Positives = 110/195 (56%), Gaps = 14/195 (7%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NVFIKNL D+ + + F GS++S +A DE G S+ +GFV FET E A K +EK+
Sbjct: 193 NVFIKNLPAEWDDAKLTEVFGEHGSVMSVALATDENGKSRQFGFVSFETHECAEKVVEKL 252
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKLK 221
+ K +FVG+ + ER+ EL K + N+Y+KN + D+ L+
Sbjct: 253 HDKEFEGKKIFVGRAQKKAERQAELKVKFEKLKHERNQRYQGVNLYVKNLDDSITDDILR 312
Query: 222 EMFEPYGTITSYRVMNNDG----KSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGR 277
E F PYG ITS +VM + +S+GFGFV + S E A KAV NG+ + K LYV
Sbjct: 313 EHFAPYGNITSSKVMTDTDVEGTRSKGFGFVCFTSAEEATKAVTEMNGRIIASKPLYVAL 372
Query: 278 AQKKAERTQELKRRF 292
AQ+K ER L++++
Sbjct: 373 AQRKDERKAHLQQQY 387
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 120/227 (52%), Gaps = 18/227 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L +YD FS G +LS +V +D S GY +V+F+ E A ++I
Sbjct: 10 MASLYVGDLHPEATEAMLYDKFSQAGPVLSIRVCRDMITRRSLGYAYVNFQRPEDAERAI 69
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N L K + I +R+ L + N++IKN + +++ L + F +G
Sbjct: 70 DTMNFDELKGKAI----RIMWSQRDPALRKSG--VGNIFIKNLDKTIDNKMLYDTFSAFG 123
Query: 229 TITSYRV-MNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQE 287
I S +V +N G+S+G+GFV +E+ E A KA++ +G ++ K ++VGR + + ER +E
Sbjct: 124 NILSCKVNVNLAGESKGYGFVHFETEEAAVKAIEKLDGMLMNDKKVFVGRFKSRGERVRE 183
Query: 288 LKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITS 334
R + Q N+++KNL DD +L + F G++ S
Sbjct: 184 YGDRAK----------QFTNVFIKNLPAEWDDAKLTEVFGEHGSVMS 220
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 65/137 (47%), Gaps = 20/137 (14%)
Query: 203 FTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAV 260
++Y+ + + + L + F G + S RV + +S G+ +V ++ PE AE+A+
Sbjct: 10 MASLYVGDLHPEATEAMLYDKFSQAGPVLSIRVCRDMITRRSLGYAYVNFQRPEDAERAI 69
Query: 261 QAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGV-NLYVKNLDDSIDD 319
N E+ GK + + +Q+ R GV N+++KNLD +ID+
Sbjct: 70 DTMNFDELKGKAIRIMWSQRDPAL-----------------RKSGVGNIFIKNLDKTIDN 112
Query: 320 ERLRKEFTPFGTITSAK 336
+ L F+ FG I S K
Sbjct: 113 KMLYDTFSAFGNILSCK 129
>gi|308486599|ref|XP_003105496.1| CRE-PAB-2 protein [Caenorhabditis remanei]
gi|308255462|gb|EFO99414.1| CRE-PAB-2 protein [Caenorhabditis remanei]
Length = 730
Score = 343 bits (879), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 173/281 (61%), Positives = 213/281 (75%), Gaps = 5/281 (1%)
Query: 59 QLGSGAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNL 118
+L G V QP D ERALDTMNF+ + GRP+RIMWSQRDP+ R++G GN+FIKNL
Sbjct: 93 RLSLGYAYVNFQQP--ADAERALDTMNFEVIHGRPMRIMWSQRDPAARRAGNGNIFIKNL 150
Query: 119 DKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNS 178
D+ IDNK++YDTFS FG+ILSCKVA DE+GNSKGYGFVHFETE +A +IEKVNGMLL+
Sbjct: 151 DRVIDNKSIYDTFSLFGNILSCKVATDEEGNSKGYGFVHFETEASALTAIEKVNGMLLSD 210
Query: 179 KIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-N 237
K VFVGKF PR +R KELGE +TNV+IKNFG+ +++KL EMF YG ITS VM +
Sbjct: 211 KKVFVGKFQPRAQRMKELGESGLKYTNVFIKNFGDHLDEKKLTEMFSKYGEITSAVVMTD 270
Query: 238 NDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGK--ILYVGRAQKKAERTQELKRRFEML 295
N GK +GFGFVA+ P+ A KAV N ++G L V RAQKK+ERT ELKR++E L
Sbjct: 271 NSGKPKGFGFVAFVDPDAAIKAVDTLNESTLEGTDLKLSVCRAQKKSERTAELKRKYEAL 330
Query: 296 KIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
K ER+ RYQGVNLYVKN+++ + D+ LR+ F FG+ITSAK
Sbjct: 331 KQERVQRYQGVNLYVKNIEEEMTDDGLREHFANFGSITSAK 371
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 81/224 (36%), Positives = 119/224 (53%), Gaps = 16/224 (7%)
Query: 99 SQRDPSLRKSGV--GNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFV 156
+QR L +SG+ NVFIKN +D K + + FS +G I S V D G KG+GFV
Sbjct: 222 AQRMKELGESGLKYTNVFIKNFGDHLDEKKLTEMFSKYGEITSAVVMTDNSGKPKGFGFV 281
Query: 157 HFETEEAANKSIEKVNGMLLNSK--IVFVGKFIPRKEREKELGEKAKLF----------T 204
F +AA K+++ +N L + V + + ER EL K +
Sbjct: 282 AFVDPDAAIKAVDTLNESTLEGTDLKLSVCRAQKKSERTAELKRKYEALKQERVQRYQGV 341
Query: 205 NVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPEFAEKAVQAW 263
N+Y+KN E+ D+ L+E F +G+ITS +VM + +G+S+GFGFV +E PE A AV
Sbjct: 342 NLYVKNIEEEMTDDGLREHFANFGSITSAKVMVDENGRSKGFGFVCFEKPEEATAAVTEM 401
Query: 264 NGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVN 307
N K + K LYV AQ+K +R +L ++ M ++ L Q N
Sbjct: 402 NSKMIGAKPLYVALAQRKEDRRAQLASQY-MQRLATLRMGQQTN 444
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 76/140 (54%), Gaps = 20/140 (14%)
Query: 79 RALDTMNFDALKGRPIRIMW------SQRDPSLRK-------------SGVGNVFIKNLD 119
+A+DT+N L+G +++ S+R L++ GV N+++KN++
Sbjct: 291 KAVDTLNESTLEGTDLKLSVCRAQKKSERTAELKRKYEALKQERVQRYQGV-NLYVKNIE 349
Query: 120 KSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSK 179
+ + + + + F+ FGSI S KV DE G SKG+GFV FE E A ++ ++N ++ +K
Sbjct: 350 EEMTDDGLREHFANFGSITSAKVMVDENGRSKGFGFVCFEKPEEATAAVTEMNSKMIGAK 409
Query: 180 IVFVGKFIPRKEREKELGEK 199
++V +++R +L +
Sbjct: 410 PLYVALAQRKEDRRAQLASQ 429
>gi|378732913|gb|EHY59372.1| nucleolin [Exophiala dermatitidis NIH/UT8656]
Length = 779
Score = 342 bits (878), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 163/262 (62%), Positives = 208/262 (79%), Gaps = 1/262 (0%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D ERAL+ +N+ ++KGRP RIMWSQRDP+LRK+G GNVFIKNLD +IDNKA++DTFS FG
Sbjct: 114 DGERALEDLNYTSIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDAAIDNKALHDTFSQFG 173
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCKVAQDE GNSKGYGFVH+ET EAAN++I+ VNGMLLN K VFVG I +++R+ +
Sbjct: 174 NILSCKVAQDELGNSKGYGFVHYETAEAANQAIKSVNGMLLNDKKVFVGHHIAKRDRQSK 233
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPE 254
L E FTNVYIKN E +DE+ ++FEPYG + S + + +GKSRGFGFV + S E
Sbjct: 234 LEEMKANFTNVYIKNIDESVSDEEFTKLFEPYGEVVSATITRDENGKSRGFGFVNFASHE 293
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A KAV+ N KE GK LYVGRAQKK ER +EL+R++E ++E+ ++YQGVNLYVKNL
Sbjct: 294 SAAKAVEELNDKEFHGKKLYVGRAQKKHEREEELRRQYEAARMEKASKYQGVNLYVKNLT 353
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
D +DD++LR+ F+ +GTITSAK
Sbjct: 354 DDVDDDKLRELFSSYGTITSAK 375
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 121/238 (50%), Gaps = 24/238 (10%)
Query: 103 PSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETE 161
PS ++++ LD S+ +++ FS+ G + S +V +D S GY +V++
Sbjct: 53 PSTAAQHSASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNT 112
Query: 162 EAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLK 221
+++E +N + + + + R ++ G+ NV+IKN +++ L
Sbjct: 113 ADGERALEDLNYTSIKGRPCRI-MWSQRDPALRKTGQ-----GNVFIKNLDAAIDNKALH 166
Query: 222 EMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
+ F +G I S +V ++ G S+G+GFV YE+ E A +A+++ NG ++ K ++VG
Sbjct: 167 DTFSQFGNILSCKVAQDELGNSKGYGFVHYETAEAANQAIKSVNGMLLNDKKVFVGHHIA 226
Query: 281 KAERT---QELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSA 335
K +R +E+K F N+Y+KN+D+S+ DE K F P+G + SA
Sbjct: 227 KRDRQSKLEEMKANF-------------TNVYIKNIDESVSDEEFTKLFEPYGEVVSA 271
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 34/50 (68%)
Query: 240 GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELK 289
GKS+GFGFV + +P+ A KAV N K V+GK LYV AQ+K R +L+
Sbjct: 440 GKSKGFGFVCFSNPDEASKAVSEMNQKMVNGKPLYVALAQRKDVRRNQLE 489
>gi|395548760|ref|XP_003775245.1| PREDICTED: polyadenylate-binding protein 1-like [Sarcophilus
harrisii]
Length = 730
Score = 342 bits (876), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 159/265 (60%), Positives = 209/265 (78%), Gaps = 2/265 (0%)
Query: 73 YMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFS 132
++ D ER + MN +KG+P+R+MWSQRDPSLRKSG+GNVF+KNL+KSI+NK++YD FS
Sbjct: 160 HLADAERVMTDMNLYIIKGKPVRLMWSQRDPSLRKSGIGNVFVKNLEKSINNKSLYDAFS 219
Query: 133 AFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKER 192
+FG+ILSCKV D+ G SKGYGFVHFE E+A ++I+K+NG+LLN +FVG F RK+R
Sbjct: 220 SFGNILSCKVITDDNG-SKGYGFVHFEHRESAERAIQKMNGILLNDLKIFVGHFKSRKDR 278
Query: 193 EKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GKSRGFGFVAYE 251
E ELG + + FTNVYIKNFGED ++++L ++FE +G S +VM +D G+S+GFGFV ++
Sbjct: 279 ESELGAQTREFTNVYIKNFGEDMDEDRLSKIFEKFGPTLSVKVMRDDCGRSKGFGFVNFQ 338
Query: 252 SPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVK 311
E A+ A+ NGKE++G+ +Y GRAQKK ER +L+R FE LK R+ RYQGVNLY+K
Sbjct: 339 KHEDAQNAIDNMNGKELNGRQIYAGRAQKKLERQTQLQRHFEQLKQNRIVRYQGVNLYIK 398
Query: 312 NLDDSIDDERLRKEFTPFGTITSAK 336
NLDD IDDE LRKEF+ FGTITSAK
Sbjct: 399 NLDDDIDDENLRKEFSSFGTITSAK 423
Score = 147 bits (370), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 78/201 (38%), Positives = 117/201 (58%), Gaps = 14/201 (6%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV+IKN + +D + F FG LS KV +D+ G SKG+GFV+F+ E A +I+ +
Sbjct: 291 NVYIKNFGEDMDEDRLSKIFEKFGPTLSVKVMRDDCGRSKGFGFVNFQKHEDAQNAIDNM 350
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKLK 221
NG LN + ++ G+ + ER+ +L + N+YIKN +D +DE L+
Sbjct: 351 NGKELNGRQIYAGRAQKKLERQTQLQRHFEQLKQNRIVRYQGVNLYIKNLDDDIDDENLR 410
Query: 222 EMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKK 281
+ F +GTITS +VM N+G+S+GFGFV + +PE A AV NG+ V K LYV AQ+K
Sbjct: 411 KEFSSFGTITSAKVMMNNGRSKGFGFVCFSAPEEATTAVTEMNGRLVASKPLYVALAQRK 470
Query: 282 AERTQELKRRFEMLKIERLNR 302
ER L ++ ++R+ R
Sbjct: 471 EERKAHLANQY----VQRMAR 487
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 121/238 (50%), Gaps = 23/238 (9%)
Query: 103 PSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGN-SKGYGFVHFETE 161
P+ S + ++++ +L + +Y+ FS G ILS +V +D + S GY +V+F+
Sbjct: 102 PNSPNSTMASLYVGDLHHEVTEAMLYEKFSPAGPILSIRVCRDAVTHRSLGYAYVNFQHL 161
Query: 162 EAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLK 221
A + + +N ++ K V + +R+ L + NV++KN + N++ L
Sbjct: 162 ADAERVMTDMNLYIIKGKPVRLMW----SQRDPSLRKSG--IGNVFVKNLEKSINNKSLY 215
Query: 222 EMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKK 281
+ F +G I S +V+ +D S+G+GFV +E E AE+A+Q NG ++ ++VG + +
Sbjct: 216 DAFSSFGNILSCKVITDDNGSKGYGFVHFEHRESAERAIQKMNGILLNDLKIFVGHFKSR 275
Query: 282 AERTQEL---KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+R EL R F N+Y+KN + +D++RL K F FG S K
Sbjct: 276 KDRESELGAQTREF-------------TNVYIKNFGEDMDEDRLSKIFEKFGPTLSVK 320
>gi|392595814|gb|EIW85137.1| polyadenylate binding protein [Coniophora puteana RWD-64-598 SS2]
Length = 683
Score = 341 bits (874), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 160/262 (61%), Positives = 206/262 (78%), Gaps = 1/262 (0%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D ERAL+ +N+ +KGRP RIMWSQRDP+LRK+G GN+FIKNLD+ IDNKA++DTF AFG
Sbjct: 98 DGERALEQLNYSLIKGRPCRIMWSQRDPALRKTGQGNIFIKNLDEQIDNKALHDTFVAFG 157
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
++LSCKVA DEQG SKGYGFVH+ET EAA +I+ VNGMLLN K V+VG IPRKER+ +
Sbjct: 158 NVLSCKVATDEQGRSKGYGFVHYETAEAAETAIKAVNGMLLNDKKVYVGPHIPRKERQSK 217
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRV-MNNDGKSRGFGFVAYESPE 254
L E FTN+YIKN + E+ +E+F YG++TS V ++++G+S+GFGFV YES E
Sbjct: 218 LDEMKAQFTNLYIKNLDTEVTQEEFEELFNRYGSVTSAIVQVDDEGRSKGFGFVNYESHE 277
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A+ AV + ++ GK LYV RAQKKAER +EL+R +E K+E+L++YQGVNLYVKNL+
Sbjct: 278 EAQAAVDNLHDTDLKGKKLYVTRAQKKAEREEELRRSYEQAKMEKLSKYQGVNLYVKNLE 337
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
D +DD++LR EF PFGTITS K
Sbjct: 338 DDVDDDKLRAEFEPFGTITSCK 359
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 75/197 (38%), Positives = 123/197 (62%), Gaps = 11/197 (5%)
Query: 107 KSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANK 166
K+ N++IKNLD + + + F+ +GS+ S V D++G SKG+GFV++E+ E A
Sbjct: 222 KAQFTNLYIKNLDTEVTQEEFEELFNRYGSVTSAIVQVDDEGRSKGFGFVNYESHEEAQA 281
Query: 167 SIEKVNGMLLNSKIVFVGKFIPRKEREKELG---EKAKL-------FTNVYIKNFGEDFN 216
+++ ++ L K ++V + + ERE+EL E+AK+ N+Y+KN +D +
Sbjct: 282 AVDNLHDTDLKGKKLYVTRAQKKAEREEELRRSYEQAKMEKLSKYQGVNLYVKNLEDDVD 341
Query: 217 DEKLKEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYV 275
D+KL+ FEP+GTITS +VM+++ G S+GFGFV + SP+ A KA+ N K + K LYV
Sbjct: 342 DDKLRAEFEPFGTITSCKVMSDEKGSSKGFGFVCFSSPDEATKAIAEMNNKMIGSKPLYV 401
Query: 276 GRAQKKAERTQELKRRF 292
AQ++ R Q+L+ +
Sbjct: 402 SLAQRREVRRQQLESQI 418
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 79/138 (57%), Gaps = 18/138 (13%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQ----RDPSLRKS-------------GVGNVFIKNL 118
+ + A+D ++ LKG+ + + +Q R+ LR+S GV N+++KNL
Sbjct: 278 EAQAAVDNLHDTDLKGKKLYVTRAQKKAEREEELRRSYEQAKMEKLSKYQGV-NLYVKNL 336
Query: 119 DKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNS 178
+ +D+ + F FG+I SCKV DE+G+SKG+GFV F + + A K+I ++N ++ S
Sbjct: 337 EDDVDDDKLRAEFEPFGTITSCKVMSDEKGSSKGFGFVCFSSPDEATKAIAEMNNKMIGS 396
Query: 179 KIVFVGKFIPRKEREKEL 196
K ++V R+ R ++L
Sbjct: 397 KPLYVSLAQRREVRRQQL 414
Score = 41.6 bits (96), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 61/135 (45%), Gaps = 18/135 (13%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQ 261
++Y+ + + E+F G + S RV + +S G+ +V Y + E+A++
Sbjct: 45 ASLYVGELDPTVTEAMIFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNTADGERALE 104
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDER 321
N + G+ + +Q R L++ QG N+++KNLD+ ID++
Sbjct: 105 QLNYSLIKGRPCRIMWSQ----RDPALRKTG-----------QG-NIFIKNLDEQIDNKA 148
Query: 322 LRKEFTPFGTITSAK 336
L F FG + S K
Sbjct: 149 LHDTFVAFGNVLSCK 163
>gi|396492663|ref|XP_003843853.1| hypothetical protein LEMA_P015040.1 [Leptosphaeria maculans JN3]
gi|312220433|emb|CBY00374.1| hypothetical protein LEMA_P015040.1 [Leptosphaeria maculans JN3]
Length = 747
Score = 339 bits (870), Expect = 9e-91, Method: Compositional matrix adjust.
Identities = 160/262 (61%), Positives = 204/262 (77%), Gaps = 1/262 (0%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D E+AL+ +N+ +KG+P RIMWSQRDP+LRK+G GNVFIKNLD +IDNKA++DTF+AFG
Sbjct: 100 DGEKALEELNYTVIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDHAIDNKALHDTFAAFG 159
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCKVAQDE GNSKGYGFVH+ET EAAN +I+ VNGMLLN K VFVG IP+KER +
Sbjct: 160 NILSCKVAQDEHGNSKGYGFVHYETAEAANNAIKHVNGMLLNEKKVFVGHHIPKKERMSK 219
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPE 254
E FTN+Y+KN D D++ +++FE +G ITS + +D GKSRGFGFV Y E
Sbjct: 220 FEEMKANFTNIYVKNIDLDVTDDEFRDLFEKHGDITSASIARDDQGKSRGFGFVNYIKHE 279
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A AV+ N E G+ LYVGRAQKK ER +EL++++E ++E+ ++YQGVNLY+KNL+
Sbjct: 280 AASVAVETLNDTEFHGQKLYVGRAQKKHEREEELRKQYEAARLEKQSKYQGVNLYIKNLN 339
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
D +DDE+LR FTPFGTITSAK
Sbjct: 340 DDVDDEKLRDMFTPFGTITSAK 361
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 34/50 (68%)
Query: 240 GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELK 289
GKS+GFGFV + +P+ A KAV N K ++GK LYV AQ+K R +L+
Sbjct: 424 GKSKGFGFVCFSNPDEATKAVTEMNQKMLEGKPLYVALAQRKDVRKNQLE 473
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 62/135 (45%), Gaps = 18/135 (13%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQ 261
++Y+ + L E+F G + S RV + +S G+ +V Y S E EKA++
Sbjct: 47 ASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNSSEDGEKALE 106
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDER 321
N + GK + +Q R L++ QG N+++KNLD +ID++
Sbjct: 107 ELNYTVIKGKPCRIMWSQ----RDPALRKTG-----------QG-NVFIKNLDHAIDNKA 150
Query: 322 LRKEFTPFGTITSAK 336
L F FG I S K
Sbjct: 151 LHDTFAAFGNILSCK 165
>gi|452001105|gb|EMD93565.1| hypothetical protein COCHEDRAFT_1096208 [Cochliobolus
heterostrophus C5]
Length = 749
Score = 339 bits (870), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 161/262 (61%), Positives = 205/262 (78%), Gaps = 1/262 (0%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D E+AL+ +N+ +KG+P RIMWSQRDP+LRK+G GNVFIKNLD +IDNKA++DTF+AFG
Sbjct: 101 DGEKALEELNYTVIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDHAIDNKALHDTFAAFG 160
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCKVAQDE GNSKGYGFVH+ET EAAN +I+ VNGMLLN K VFVG IP+KER +
Sbjct: 161 NILSCKVAQDELGNSKGYGFVHYETAEAANNAIKHVNGMLLNEKKVFVGHHIPKKERMSK 220
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPE 254
E FTN+Y+KN D +DE+ +E+FE +G ITS + ++ GKSRGFGFV Y E
Sbjct: 221 FEEMKANFTNIYVKNIDLDVSDEEFRELFEKHGDITSASIARDEQGKSRGFGFVNYIKHE 280
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A AV A N + G+ LYVGRAQKK ER +EL++++E ++E+ ++YQGVNLY+KNL+
Sbjct: 281 AASAAVDALNDTDFRGQKLYVGRAQKKHEREEELRKQYEAARLEKQSKYQGVNLYIKNLN 340
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
D +DDE+LR FTPFGTITSAK
Sbjct: 341 DDVDDEKLRDMFTPFGTITSAK 362
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 78/246 (31%), Positives = 122/246 (49%), Gaps = 63/246 (25%)
Query: 107 KSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANK 166
K+ N+++KN+D + ++ + F G I S +A+DEQG S+G+GFV++ EAA+
Sbjct: 225 KANFTNIYVKNIDLDVSDEEFRELFEKHGDITSASIARDEQGKSRGFGFVNYIKHEAASA 284
Query: 167 SIEKVNGMLLNSKIVFVGKFIPRKEREKELG---EKAKL-------FTNVYIKNFGEDFN 216
+++ +N + ++VG+ + ERE+EL E A+L N+YIKN +D +
Sbjct: 285 AVDALNDTDFRGQKLYVGRAQKKHEREEELRKQYEAARLEKQSKYQGVNLYIKNLNDDVD 344
Query: 217 DEKLKEMFEPYGTITSYRVM---------------------------------------- 236
DEKL++MF P+GTITS +VM
Sbjct: 345 DEKLRDMFTPFGTITSAKVMRDAMPAERSETPGDEKKEESKEEAEKTEESKEGADDKKDE 404
Query: 237 NNDGK-------------SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAE 283
N G+ S+GFGFV + +P+ A KAV N K ++GK LYV AQ+K
Sbjct: 405 NKPGEKVTIKGEKKILGKSKGFGFVCFSNPDEATKAVTEMNQKMIEGKPLYVALAQRKDV 464
Query: 284 RTQELK 289
R +L+
Sbjct: 465 RKNQLE 470
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 62/135 (45%), Gaps = 18/135 (13%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQ 261
++Y+ + L E+F G + S RV + +S G+ +V Y S E EKA++
Sbjct: 48 ASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNSSEDGEKALE 107
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDER 321
N + GK + +Q R L++ QG N+++KNLD +ID++
Sbjct: 108 ELNYTVIKGKPCRIMWSQ----RDPALRKTG-----------QG-NVFIKNLDHAIDNKA 151
Query: 322 LRKEFTPFGTITSAK 336
L F FG I S K
Sbjct: 152 LHDTFAAFGNILSCK 166
>gi|351706751|gb|EHB09670.1| Polyadenylate-binding protein 4-like protein [Heterocephalus
glaber]
Length = 370
Score = 339 bits (870), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 159/264 (60%), Positives = 210/264 (79%), Gaps = 2/264 (0%)
Query: 74 MLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSA 133
+ D +RALDTMNFD +KGRPIR+MWSQRD LR+SG+GNVF+KNLD+S+DNK +Y+ FS
Sbjct: 61 LADAQRALDTMNFDVIKGRPIRLMWSQRDACLRRSGIGNVFVKNLDRSVDNKTLYEHFSG 120
Query: 134 FGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKERE 193
FG ILS KV D+QG SKGY FVHF+++ AAN +IE++NG ++N + VFV F PRK+RE
Sbjct: 121 FGKILSSKVMSDDQG-SKGYAFVHFQSQSAANCAIEQMNGKVINDRPVFVAPFKPRKDRE 179
Query: 194 KELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYES 252
EL +A FTNVYIKNFG+D +DE+L+ +F YG S +VM ++ GKS+GFGFV++ES
Sbjct: 180 AELRSRASEFTNVYIKNFGDDMDDERLQGVFSRYGKTLSVKVMTDSSGKSKGFGFVSFES 239
Query: 253 PEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKN 312
E A++AV+ NGK+++G++++VGRAQKK ER ELK FE +K ER+ R QGV LYVKN
Sbjct: 240 HEAAKRAVEEMNGKDMNGQLVFVGRAQKKVERQAELKHMFEQMKKERIRRCQGVKLYVKN 299
Query: 313 LDDSIDDERLRKEFTPFGTITSAK 336
LDD++DDE+LRKEF+ FG+IT K
Sbjct: 300 LDDTVDDEQLRKEFSSFGSITRVK 323
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 79/217 (36%), Positives = 123/217 (56%), Gaps = 16/217 (7%)
Query: 80 ALDTMNFDALKGRPIRIM----WSQRDPSLRK--SGVGNVFIKNLDKSIDNKAMYDTFSA 133
A++ MN + RP+ + R+ LR S NV+IKN +D++ + FS
Sbjct: 153 AIEQMNGKVINDRPVFVAPFKPRKDREAELRSRASEFTNVYIKNFGDDMDDERLQGVFSR 212
Query: 134 FGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKERE 193
+G LS KV D G SKG+GFV FE+ EAA +++E++NG +N ++VFVG+ + ER+
Sbjct: 213 YGKTLSVKVMTDSSGKSKGFGFVSFESHEAAKRAVEEMNGKDMNGQLVFVGRAQKKVERQ 272
Query: 194 KELG--------EKAKLFTNV--YIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDGKSR 243
EL E+ + V Y+KN + +DE+L++ F +G+IT +VM +G SR
Sbjct: 273 AELKHMFEQMKKERIRRCQGVKLYVKNLDDTVDDEQLRKEFSSFGSITRVKVMKEEGYSR 332
Query: 244 GFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
GFG + + SPE A KA+ NG+ + K L + AQ+
Sbjct: 333 GFGLICFSSPEEAAKALTEMNGRVLGSKALSIALAQR 369
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 115/228 (50%), Gaps = 17/228 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSK-GYGFVHFETEEAANKSI 168
+ ++++ +L ++ FSA G +LS ++ +D GY +V+F A +++
Sbjct: 9 LASLYVGDLHAEATEDLLFRKFSAAGPVLSIRICRDLATRQPLGYAYVNFLQLADAQRAL 68
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N ++ G+ I +++ + NV++KN +++ L E F +G
Sbjct: 69 DTMNFDVIK------GRPIRLMWSQRDACLRRSGIGNVFVKNLDRSVDNKTLYEHFSGFG 122
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S +VM++D S+G+ FV ++S A A++ NGK ++ + ++V + + +R EL
Sbjct: 123 KILSSKVMSDDQGSKGYAFVHFQSQSAANCAIEQMNGKVINDRPVFVAPFKPRKDREAEL 182
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ R + N+Y+KN D +DDERL+ F+ +G S K
Sbjct: 183 RSRAS----------EFTNVYIKNFGDDMDDERLQGVFSRYGKTLSVK 220
>gi|451854943|gb|EMD68235.1| hypothetical protein COCSADRAFT_270468 [Cochliobolus sativus
ND90Pr]
Length = 749
Score = 339 bits (869), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 161/262 (61%), Positives = 205/262 (78%), Gaps = 1/262 (0%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D E+AL+ +N+ +KG+P RIMWSQRDP+LRK+G GNVFIKNLD +IDNKA++DTF+AFG
Sbjct: 101 DGEKALEELNYTVIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDHAIDNKALHDTFAAFG 160
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCKVAQDE GNSKGYGFVH+ET EAAN +I+ VNGMLLN K VFVG IP+KER +
Sbjct: 161 NILSCKVAQDELGNSKGYGFVHYETAEAANNAIKHVNGMLLNEKKVFVGHHIPKKERMSK 220
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPE 254
E FTN+Y+KN D +DE+ +E+FE +G ITS + ++ GKSRGFGFV Y E
Sbjct: 221 FEEMKANFTNIYVKNIDLDVSDEEFRELFEKHGDITSASIARDEQGKSRGFGFVNYIKHE 280
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A AV A N + G+ LYVGRAQKK ER +EL++++E ++E+ ++YQGVNLY+KNL+
Sbjct: 281 AASAAVDALNDTDFRGQKLYVGRAQKKHEREEELRKQYEAARLEKQSKYQGVNLYIKNLN 340
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
D +DDE+LR FTPFGTITSAK
Sbjct: 341 DDVDDEKLRDMFTPFGTITSAK 362
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 78/246 (31%), Positives = 122/246 (49%), Gaps = 63/246 (25%)
Query: 107 KSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANK 166
K+ N+++KN+D + ++ + F G I S +A+DEQG S+G+GFV++ EAA+
Sbjct: 225 KANFTNIYVKNIDLDVSDEEFRELFEKHGDITSASIARDEQGKSRGFGFVNYIKHEAASA 284
Query: 167 SIEKVNGMLLNSKIVFVGKFIPRKEREKELG---EKAKL-------FTNVYIKNFGEDFN 216
+++ +N + ++VG+ + ERE+EL E A+L N+YIKN +D +
Sbjct: 285 AVDALNDTDFRGQKLYVGRAQKKHEREEELRKQYEAARLEKQSKYQGVNLYIKNLNDDVD 344
Query: 217 DEKLKEMFEPYGTITSYRVM---------------------------------------- 236
DEKL++MF P+GTITS +VM
Sbjct: 345 DEKLRDMFTPFGTITSAKVMRDAMPAERSETPGDEKKEEAKEESEKTEESNEGADDKKDE 404
Query: 237 NNDGK-------------SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAE 283
N G+ S+GFGFV + +P+ A KAV N K ++GK LYV AQ+K
Sbjct: 405 NKPGEKVTIKGEKKILGKSKGFGFVCFSNPDEATKAVTEMNQKMIEGKPLYVALAQRKDV 464
Query: 284 RTQELK 289
R +L+
Sbjct: 465 RKNQLE 470
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 62/135 (45%), Gaps = 18/135 (13%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQ 261
++Y+ + L E+F G + S RV + +S G+ +V Y S E EKA++
Sbjct: 48 ASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNSSEDGEKALE 107
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDER 321
N + GK + +Q R L++ QG N+++KNLD +ID++
Sbjct: 108 ELNYTVIKGKPCRIMWSQ----RDPALRKTG-----------QG-NVFIKNLDHAIDNKA 151
Query: 322 LRKEFTPFGTITSAK 336
L F FG I S K
Sbjct: 152 LHDTFAAFGNILSCK 166
>gi|189190886|ref|XP_001931782.1| polyadenylate-binding protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187973388|gb|EDU40887.1| polyadenylate-binding protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 704
Score = 338 bits (868), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 161/262 (61%), Positives = 204/262 (77%), Gaps = 1/262 (0%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D E+AL+ +N+ +KG+P RIMWSQRDP+LRK+G GNVFIKNLD +IDNKA++DTF+AFG
Sbjct: 101 DGEKALEELNYTVIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDHAIDNKALHDTFAAFG 160
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCKVAQDE GNSKGYGFVH+ET EAAN +I+ VNGMLLN K VFVG IP+KER +
Sbjct: 161 NILSCKVAQDELGNSKGYGFVHYETAEAANNAIKHVNGMLLNEKKVFVGHHIPKKERMSK 220
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPE 254
E FTN+Y+KN D +DE +++FE +G ITS + +D GKSRGFGFV Y E
Sbjct: 221 FEEMKANFTNIYVKNIDLDVSDEDFRDLFEKHGDITSASIARDDQGKSRGFGFVNYIKHE 280
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A AV A N + G+ LYVGRAQKK ER +EL++++E ++E+ ++YQGVNLY+KNL+
Sbjct: 281 AASAAVDALNDTDFRGQKLYVGRAQKKHEREEELRKQYEAARLEKQSKYQGVNLYIKNLN 340
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
D +DDE+LR FTPFGTITSAK
Sbjct: 341 DDVDDEKLRDMFTPFGTITSAK 362
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 77/245 (31%), Positives = 121/245 (49%), Gaps = 62/245 (25%)
Query: 107 KSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANK 166
K+ N+++KN+D + ++ D F G I S +A+D+QG S+G+GFV++ EAA+
Sbjct: 225 KANFTNIYVKNIDLDVSDEDFRDLFEKHGDITSASIARDDQGKSRGFGFVNYIKHEAASA 284
Query: 167 SIEKVNGMLLNSKIVFVGKFIPRKEREKELG---EKAKL-------FTNVYIKNFGEDFN 216
+++ +N + ++VG+ + ERE+EL E A+L N+YIKN +D +
Sbjct: 285 AVDALNDTDFRGQKLYVGRAQKKHEREEELRKQYEAARLEKQSKYQGVNLYIKNLNDDVD 344
Query: 217 DEKLKEMFEPYGTITSYRVMNND------------------------------------- 239
DEKL++MF P+GTITS +VM +
Sbjct: 345 DEKLRDMFTPFGTITSAKVMRDAMPAAGSEDATDEKKDESKEESEEAKDESKEDSDDKKD 404
Query: 240 ---------------GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAER 284
GKS+GFGFV + +P+ A KAV N K ++ K LYV AQ+K R
Sbjct: 405 EKADKVTIKGEKKILGKSKGFGFVCFSNPDEATKAVTEMNQKMIENKPLYVALAQRKDVR 464
Query: 285 TQELK 289
+L+
Sbjct: 465 KNQLE 469
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 62/135 (45%), Gaps = 18/135 (13%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQ 261
++Y+ + L E+F G + S RV + +S G+ +V Y S E EKA++
Sbjct: 48 ASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNSSEDGEKALE 107
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDER 321
N + GK + +Q R L++ QG N+++KNLD +ID++
Sbjct: 108 ELNYTVIKGKPCRIMWSQ----RDPALRK-----------TGQG-NVFIKNLDHAIDNKA 151
Query: 322 LRKEFTPFGTITSAK 336
L F FG I S K
Sbjct: 152 LHDTFAAFGNILSCK 166
>gi|170674510|gb|ACB30143.1| poly(A) RNA binding protein [Epichloe festucae]
Length = 739
Score = 338 bits (868), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 159/262 (60%), Positives = 207/262 (79%), Gaps = 1/262 (0%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D E+AL+ +N+ +KGRP RIMWSQRDP+LRK+G GNVFIKNLD +IDNKA++DTF+AFG
Sbjct: 112 DGEKALEELNYTIIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDVAIDNKALHDTFAAFG 171
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCKVAQDE GNSKGYGFVH+ET+EAA ++I+ VNGMLLN K V+VG IP+K+R+ +
Sbjct: 172 NILSCKVAQDEHGNSKGYGFVHYETDEAAQQAIKHVNGMLLNEKKVYVGHHIPKKDRQSK 231
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPE 254
E FTN+Y+KN + +D++ +E+FE YG ITS + + DGKSRGFGFV Y + E
Sbjct: 232 FEEMKANFTNIYVKNVNPEASDDEFRELFERYGEITSSSLARDQDGKSRGFGFVNYTTHE 291
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A KAV NGK+ G+ LYVGRAQKK ER +EL++ +E ++E+ ++YQGVNLY+KNLD
Sbjct: 292 SAYKAVDELNGKDFKGQDLYVGRAQKKHEREEELRKSYEAARLEKASKYQGVNLYIKNLD 351
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
D +DDE+LR F+ FG ITSAK
Sbjct: 352 DDVDDEKLRHMFSEFGPITSAK 373
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/232 (31%), Positives = 120/232 (51%), Gaps = 49/232 (21%)
Query: 107 KSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANK 166
K+ N+++KN++ + + F +G I S +A+D+ G S+G+GFV++ T E+A K
Sbjct: 236 KANFTNIYVKNVNPEASDDEFRELFERYGEITSSSLARDQDGKSRGFGFVNYTTHESAYK 295
Query: 167 SIEKVNGMLLNSKIVFVGKFIPRKEREKELG--------EKAKLF--TNVYIKNFGEDFN 216
+++++NG + ++VG+ + ERE+EL EKA + N+YIKN +D +
Sbjct: 296 AVDELNGKDFKGQDLYVGRAQKKHEREEELRKSYEAARLEKASKYQGVNLYIKNLDDDVD 355
Query: 217 DEKLKEMFEPYGTITSYRVMNND------------------------------------- 239
DEKL+ MF +G ITS +VM +
Sbjct: 356 DEKLRHMFSEFGPITSAKVMRDAPSDGSDEEKEDEQEAEPKKEGNVVEADEEGSEKKGDK 415
Query: 240 --GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELK 289
GKS+GFGFV + +P+ A KAV + + ++GK LYV AQ+K R +L+
Sbjct: 416 KFGKSKGFGFVCFSNPDDATKAVAEMSQRMINGKPLYVALAQRKDVRKSQLE 467
Score = 44.7 bits (104), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 61/135 (45%), Gaps = 18/135 (13%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQ 261
++Y+ + L E+F G + S RV + +S G+ +V Y S EKA++
Sbjct: 59 ASLYVGELDPSVTEAMLFELFSQIGAVASIRVCRDAVTRRSLGYAYVNYNSTSDGEKALE 118
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDER 321
N + G+ + +Q R L++ QG N+++KNLD +ID++
Sbjct: 119 ELNYTIIKGRPCRIMWSQ----RDPALRKTG-----------QG-NVFIKNLDVAIDNKA 162
Query: 322 LRKEFTPFGTITSAK 336
L F FG I S K
Sbjct: 163 LHDTFAAFGNILSCK 177
>gi|169622264|ref|XP_001804541.1| hypothetical protein SNOG_14351 [Phaeosphaeria nodorum SN15]
gi|187608896|sp|Q0U1G2.3|PABP_PHANO RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|160704734|gb|EAT78222.2| hypothetical protein SNOG_14351 [Phaeosphaeria nodorum SN15]
Length = 744
Score = 338 bits (868), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 162/262 (61%), Positives = 202/262 (77%), Gaps = 1/262 (0%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D E+AL+ +N+ +KG+P RIMWSQRDP+LRK+G GNVFIKNLD +IDNKA++DTF+AFG
Sbjct: 101 DGEKALEELNYTVIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDHAIDNKALHDTFAAFG 160
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCKVAQDE GNSKGYGFVH+ET EAAN +I+ VNGMLLN K VFVG IP+KER +
Sbjct: 161 NILSCKVAQDELGNSKGYGFVHYETAEAANNAIKHVNGMLLNEKKVFVGHHIPKKERMSK 220
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPE 254
E FTN+Y+KN D DE +E+FE +G ITS + +D GKSRGFGFV Y E
Sbjct: 221 FEEMKANFTNIYVKNIDLDVTDEDFRELFEKHGDITSASIARDDQGKSRGFGFVNYIRHE 280
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A AV N E G+ LYVGRAQKK ER +EL++++E ++E+ ++YQGVNLY+KNL+
Sbjct: 281 AAAVAVDHLNDIEFKGQKLYVGRAQKKHEREEELRKQYEAARLEKQSKYQGVNLYIKNLN 340
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
D +DDE+LR FTPFGTITSAK
Sbjct: 341 DDVDDEKLRDMFTPFGTITSAK 362
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/140 (36%), Positives = 87/140 (62%), Gaps = 10/140 (7%)
Query: 107 KSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANK 166
K+ N+++KN+D + ++ + F G I S +A+D+QG S+G+GFV++ EAA
Sbjct: 225 KANFTNIYVKNIDLDVTDEDFRELFEKHGDITSASIARDDQGKSRGFGFVNYIRHEAAAV 284
Query: 167 SIEKVNGMLLNSKIVFVGKFIPRKEREKELG---EKAKL-------FTNVYIKNFGEDFN 216
+++ +N + + ++VG+ + ERE+EL E A+L N+YIKN +D +
Sbjct: 285 AVDHLNDIEFKGQKLYVGRAQKKHEREEELRKQYEAARLEKQSKYQGVNLYIKNLNDDVD 344
Query: 217 DEKLKEMFEPYGTITSYRVM 236
DEKL++MF P+GTITS +V+
Sbjct: 345 DEKLRDMFTPFGTITSAKVI 364
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 34/50 (68%)
Query: 240 GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELK 289
GKS+GFGFV + +P+ A KAV N K ++GK LYV AQ+K R +L+
Sbjct: 422 GKSKGFGFVCFSNPDEATKAVTEMNQKMIEGKPLYVALAQRKDVRKNQLE 471
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 62/135 (45%), Gaps = 18/135 (13%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQ 261
++Y+ + L E+F G + S RV + +S G+ +V Y S E EKA++
Sbjct: 48 ASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNSSEDGEKALE 107
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDER 321
N + GK + +Q R L++ QG N+++KNLD +ID++
Sbjct: 108 ELNYTVIKGKPCRIMWSQ----RDPALRKTG-----------QG-NVFIKNLDHAIDNKA 151
Query: 322 LRKEFTPFGTITSAK 336
L F FG I S K
Sbjct: 152 LHDTFAAFGNILSCK 166
>gi|358334962|dbj|GAA31742.2| polyadenylate-binding protein, partial [Clonorchis sinensis]
Length = 738
Score = 338 bits (868), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 160/264 (60%), Positives = 205/264 (77%), Gaps = 6/264 (2%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D ERAL+ +N+++ GRPIRIMWSQRDPSLRKSG GN+FIKNLDK+ID K +YDTFS G
Sbjct: 54 DAERALENLNYESFMGRPIRIMWSQRDPSLRKSGKGNIFIKNLDKTIDQKQLYDTFSFIG 113
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
ILSCK+A DE GNSKGYGFVHFE EE A ++IEK+NGM++N ++V+VGKFIP +R+
Sbjct: 114 KILSCKIAMDEHGNSKGYGFVHFEKEECAERAIEKINGMMINDRVVYVGKFIPSSDRKSA 173
Query: 196 LGEKAKL-FTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRV-MNNDGKSRGFGFVAYESP 253
G KL F N+Y+KNF D DEKL++MF +G I S V N +GKS+GFGFV + P
Sbjct: 174 SG---KLRFNNIYVKNFPPDTTDEKLRDMFSEFGEIKSCCVEKNPEGKSKGFGFVCFHDP 230
Query: 254 EFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRY-QGVNLYVKN 312
+ AE+AV+ +GKE++G+ LY RAQ+K ER +ELK+R E + ERL++Y GVNLYVKN
Sbjct: 231 DHAEQAVRVMHGKEINGRALYASRAQRKEERQEELKQRLEKQRAERLSKYVPGVNLYVKN 290
Query: 313 LDDSIDDERLRKEFTPFGTITSAK 336
LDD+IDDERL++ F+ +G ITSAK
Sbjct: 291 LDDNIDDERLKEAFSHYGPITSAK 314
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 75/216 (34%), Positives = 124/216 (57%), Gaps = 21/216 (9%)
Query: 106 RKSGVG-----NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFET 160
RKS G N+++KN ++ + D FS FG I SC V ++ +G SKG+GFV F
Sbjct: 170 RKSASGKLRFNNIYVKNFPPDTTDEKLRDMFSEFGEIKSCCVEKNPEGKSKGFGFVCFHD 229
Query: 161 EEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEK-----AKLFT------NVYIK 209
+ A +++ ++G +N + ++ + ++ER++EL ++ A+ + N+Y+K
Sbjct: 230 PDHAEQAVRVMHGKEINGRALYASRAQRKEERQEELKQRLEKQRAERLSKYVPGVNLYVK 289
Query: 210 NFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGKSRGFGFVAYESPEFAEKAVQAWNGKEV 268
N ++ +DE+LKE F YG ITS +VM + +G+S+GFGFV + PE A +AV N V
Sbjct: 290 NLDDNIDDERLKEAFSHYGPITSAKVMTDANGRSKGFGFVCFTQPEQAARAVTEMNATLV 349
Query: 269 DGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQ 304
K LYV AQ+K +R +L + +RL +Y+
Sbjct: 350 GSKPLYVALAQRKEDRRAKLIAEHQ----QRLAQYR 381
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 121/230 (52%), Gaps = 28/230 (12%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQD-EQGNSKGYGFVHFETEEAANKSIEK 170
++++ +L +Y FS G++LS ++ +D NS GYG+V+FE + A +++E
Sbjct: 2 SLYVGDLHPLATEALLYSKFSEIGTVLSARICRDLATRNSLGYGYVNFEEPKDAERALEN 61
Query: 171 VNGMLLNSKIVFVGKFIPR---KEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPY 227
+N F+G+ I R +R+ L + K N++IKN + + ++L + F
Sbjct: 62 LN------YESFMGRPI-RIMWSQRDPSLRKSGK--GNIFIKNLDKTIDQKQLYDTFSFI 112
Query: 228 GTITSYRV-MNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAER-T 285
G I S ++ M+ G S+G+GFV +E E AE+A++ NG ++ +++YVG+ ++R +
Sbjct: 113 GKILSCKIAMDEHGNSKGYGFVHFEKEECAERAIEKINGMMINDRVVYVGKFIPSSDRKS 172
Query: 286 QELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSA 335
K RF N+YVKN DE+LR F+ FG I S
Sbjct: 173 ASGKLRFN-------------NIYVKNFPPDTTDEKLRDMFSEFGEIKSC 209
>gi|340375830|ref|XP_003386437.1| PREDICTED: polyadenylate-binding protein 1-like [Amphimedon
queenslandica]
Length = 618
Score = 338 bits (867), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 170/275 (61%), Positives = 215/275 (78%), Gaps = 4/275 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMN++ +KG+P RIMWSQRDPSLR+SGVGN+FIKNLDKSI
Sbjct: 57 GYAYVNFQQP--ADAERALDTMNYEPIKGQPCRIMWSQRDPSLRRSGVGNIFIKNLDKSI 114
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
D+KA+YDTFSAFG+ILSCKVA D +SKG+GFVHF+ +EAA+ +IEKVNG LLN V+
Sbjct: 115 DHKALYDTFSAFGNILSCKVATDGNRHSKGFGFVHFDEQEAADLAIEKVNGKLLNDMKVY 174
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGK 241
VGKFIPRK+R G + +TNV+IKNFGEDF D L ++FE YG+I S VM + +G
Sbjct: 175 VGKFIPRKDRSHTNGFN-QHYTNVFIKNFGEDFTDTMLYDVFEKYGSIVSAVVMKDGEGL 233
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
S+GFGFV++ES E A AVQA + V+G+ +Y GRAQKK ER++EL RR E + ERL+
Sbjct: 234 SKGFGFVSFESHEAASAAVQAVHNSIVNGRQVYCGRAQKKNERSRELMRRKEEQRQERLS 293
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLY+KNL+D++ +E+L+ EF+ FG+ITSAK
Sbjct: 294 RYQGVNLYIKNLEDTLGEEKLKSEFSKFGSITSAK 328
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 88/235 (37%), Positives = 131/235 (55%), Gaps = 18/235 (7%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NVFIKN + + +YD F +GSI+S V +D +G SKG+GFV FE+ EAA+ +++ V
Sbjct: 196 NVFIKNFGEDFTDTMLYDVFEKYGSIVSAVVMKDGEGLSKGFGFVSFESHEAASAAVQAV 255
Query: 172 NGMLLNSKIVFVGKFIPRKEREKEL--------GEKAKLF--TNVYIKNFGEDFNDEKLK 221
+ ++N + V+ G+ + ER +EL E+ + N+YIKN + +EKLK
Sbjct: 256 HNSIVNGRQVYCGRAQKKNERSRELMRRKEEQRQERLSRYQGVNLYIKNLEDTLGEEKLK 315
Query: 222 EMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
F +G+ITS ++M ++ G S+GFGFV + SPE A KAV NG+ V K LYV AQ+
Sbjct: 316 SEFSKFGSITSAKIMTDEFGHSKGFGFVCFSSPEEATKAVTEMNGRIVVSKPLYVALAQR 375
Query: 281 KAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSA 335
K ER L + M +I R + +Y I ++R PF T +A
Sbjct: 376 KEERQAHLAAQ-RMQRIARGIPQGQMQMYPPYYMPGIQNQR------PFFTAMAA 423
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 115/241 (47%), Gaps = 19/241 (7%)
Query: 97 MWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGF 155
M +P + ++++ +L ++ +++ FS G +LS +V +D S GY +
Sbjct: 1 MAVNMNPPPSFPPLQSLYVGDLLPDVNEAVLFEQFSKAGPVLSIRVCRDLITKRSLGYAY 60
Query: 156 VHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDF 215
V+F+ A ++++ +N + + I +R+ L N++IKN +
Sbjct: 61 VNFQQPADAERALDTMNYEPIKGQPC----RIMWSQRDPSLRRSG--VGNIFIKNLDKSI 114
Query: 216 NDEKLKEMFEPYGTITSYRVMNNDGK-SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILY 274
+ + L + F +G I S +V + + S+GFGFV ++ E A+ A++ NGK ++ +Y
Sbjct: 115 DHKALYDTFSAFGNILSCKVATDGNRHSKGFGFVHFDEQEAADLAIEKVNGKLLNDMKVY 174
Query: 275 VGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITS 334
VG+ + +R+ N++ N+++KN + D L F +G+I S
Sbjct: 175 VGKFIPRKDRSH----------TNGFNQHY-TNVFIKNFGEDFTDTMLYDVFEKYGSIVS 223
Query: 335 A 335
A
Sbjct: 224 A 224
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 60/94 (63%), Gaps = 1/94 (1%)
Query: 106 RKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAAN 165
R GV N++IKNL+ ++ + + FS FGSI S K+ DE G+SKG+GFV F + E A
Sbjct: 294 RYQGV-NLYIKNLEDTLGEEKLKSEFSKFGSITSAKIMTDEFGHSKGFGFVCFSSPEEAT 352
Query: 166 KSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEK 199
K++ ++NG ++ SK ++V ++ER+ L +
Sbjct: 353 KAVTEMNGRIVVSKPLYVALAQRKEERQAHLAAQ 386
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 65/137 (47%), Gaps = 20/137 (14%)
Query: 203 FTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAV 260
++Y+ + D N+ L E F G + S RV + +S G+ +V ++ P AE+A+
Sbjct: 14 LQSLYVGDLLPDVNEAVLFEQFSKAGPVLSIRVCRDLITKRSLGYAYVNFQQPADAERAL 73
Query: 261 QAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGV-NLYVKNLDDSIDD 319
N + + G+ + +Q R L+R GV N+++KNLD SID
Sbjct: 74 DTMNYEPIKGQPCRIMWSQ----RDPSLRR-------------SGVGNIFIKNLDKSIDH 116
Query: 320 ERLRKEFTPFGTITSAK 336
+ L F+ FG I S K
Sbjct: 117 KALYDTFSAFGNILSCK 133
>gi|330938161|ref|XP_003305701.1| hypothetical protein PTT_18612 [Pyrenophora teres f. teres 0-1]
gi|311317207|gb|EFQ86241.1| hypothetical protein PTT_18612 [Pyrenophora teres f. teres 0-1]
Length = 749
Score = 338 bits (867), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 160/262 (61%), Positives = 204/262 (77%), Gaps = 1/262 (0%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D E+AL+ +N+ +KG+P RIMWSQRDP+LRK+G GNVFIKNLD +IDNKA++DTF+AFG
Sbjct: 101 DGEKALEELNYTVIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDHAIDNKALHDTFAAFG 160
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCKVAQDE GNSKGYGFVH+ET EAAN +I+ VNGMLLN K VFVG IP+KER +
Sbjct: 161 NILSCKVAQDELGNSKGYGFVHYETAEAANNAIKHVNGMLLNEKKVFVGHHIPKKERMSK 220
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPE 254
E FTN+Y+KN D +D+ +++FE +G ITS + +D GKSRGFGFV Y E
Sbjct: 221 FEEMKANFTNIYVKNIDLDVSDDDFRDLFEKHGDITSASIARDDQGKSRGFGFVNYIKHE 280
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A AV A N + G+ LYVGRAQKK ER +EL++++E ++E+ ++YQGVNLY+KNL+
Sbjct: 281 AASAAVDALNDTDFRGQKLYVGRAQKKHEREEELRKQYEAARLEKQSKYQGVNLYIKNLN 340
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
D +DDE+LR FTPFGTITSAK
Sbjct: 341 DDVDDEKLRDMFTPFGTITSAK 362
Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 54/148 (36%), Positives = 89/148 (60%), Gaps = 10/148 (6%)
Query: 107 KSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANK 166
K+ N+++KN+D + + D F G I S +A+D+QG S+G+GFV++ EAA+
Sbjct: 225 KANFTNIYVKNIDLDVSDDDFRDLFEKHGDITSASIARDDQGKSRGFGFVNYIKHEAASA 284
Query: 167 SIEKVNGMLLNSKIVFVGKFIPRKEREKELG---EKAKL-------FTNVYIKNFGEDFN 216
+++ +N + ++VG+ + ERE+EL E A+L N+YIKN +D +
Sbjct: 285 AVDALNDTDFRGQKLYVGRAQKKHEREEELRKQYEAARLEKQSKYQGVNLYIKNLNDDVD 344
Query: 217 DEKLKEMFEPYGTITSYRVMNNDGKSRG 244
DEKL++MF P+GTITS +VM + + G
Sbjct: 345 DEKLRDMFTPFGTITSAKVMRDAMPAAG 372
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 62/135 (45%), Gaps = 18/135 (13%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQ 261
++Y+ + L E+F G + S RV + +S G+ +V Y S E EKA++
Sbjct: 48 ASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNSSEDGEKALE 107
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDER 321
N + GK + +Q R L++ QG N+++KNLD +ID++
Sbjct: 108 ELNYTVIKGKPCRIMWSQ----RDPALRKTG-----------QG-NVFIKNLDHAIDNKA 151
Query: 322 LRKEFTPFGTITSAK 336
L F FG I S K
Sbjct: 152 LHDTFAAFGNILSCK 166
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 33/50 (66%)
Query: 240 GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELK 289
GKS+GFGFV + +P+ A KAV N K ++ K LYV AQ+K R +L+
Sbjct: 423 GKSKGFGFVCFSNPDEATKAVTEMNQKMIENKPLYVALAQRKDVRKNQLE 472
>gi|345561329|gb|EGX44424.1| hypothetical protein AOL_s00193g6 [Arthrobotrys oligospora ATCC
24927]
Length = 744
Score = 338 bits (866), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 161/263 (61%), Positives = 206/263 (78%), Gaps = 2/263 (0%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D ERAL+ +N+ +KGRP RIMWSQRDP+LRK+G GNVFIKNLD +IDNKA++DTF+AFG
Sbjct: 104 DGERALEELNYTLIKGRPCRIMWSQRDPALRKTGHGNVFIKNLDIAIDNKALHDTFAAFG 163
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCKVAQDE GNSKGYGFVH+ET EAA +I+ VNGMLLN K V+VG IP+KER+ +
Sbjct: 164 NILSCKVAQDENGNSKGYGFVHYETAEAATNAIKHVNGMLLNEKKVYVGHHIPKKERQSK 223
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM--NNDGKSRGFGFVAYESP 253
E FTNVY+KN + +D++ + +FE +G ITS + + G SRGFGFV + S
Sbjct: 224 FDEMKANFTNVYVKNIDPEVSDDEFRTLFENFGQITSASLARDGDSGTSRGFGFVNFSSH 283
Query: 254 EFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNL 313
E A AV A + E+ G+ L+VGRAQKK ER +EL++++E +IE+ ++YQGVNLYVKNL
Sbjct: 284 EAAAAAVDALHETELKGQALFVGRAQKKHEREEELRKQYEAARIEKASKYQGVNLYVKNL 343
Query: 314 DDSIDDERLRKEFTPFGTITSAK 336
DD IDDERLR+EF+P+GTITSAK
Sbjct: 344 DDEIDDERLRQEFSPYGTITSAK 366
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 77/220 (35%), Positives = 120/220 (54%), Gaps = 37/220 (16%)
Query: 107 KSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQD-EQGNSKGYGFVHFETEEAAN 165
K+ NV++KN+D + + F FG I S +A+D + G S+G+GFV+F + EAA
Sbjct: 228 KANFTNVYVKNIDPEVSDDEFRTLFENFGQITSASLARDGDSGTSRGFGFVNFSSHEAAA 287
Query: 166 KSIEKVNGMLLNSKIVFVGKFIPRKEREKELG--------EKAKLF--TNVYIKNFGEDF 215
+++ ++ L + +FVG+ + ERE+EL EKA + N+Y+KN ++
Sbjct: 288 AAVDALHETELKGQALFVGRAQKKHEREEELRKQYEAARIEKASKYQGVNLYVKNLDDEI 347
Query: 216 NDEKLKEMFEPYGTITSYRVMNND--------------------------GKSRGFGFVA 249
+DE+L++ F PYGTITS +VM + GKS+GFGFV
Sbjct: 348 DDERLRQEFSPYGTITSAKVMRDSLDSPKEKDGEESKVGEPEEKATDKKQGKSKGFGFVC 407
Query: 250 YESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELK 289
+ +P+ A KAV N + V+GK LYV AQ+K R +L+
Sbjct: 408 FSNPDEASKAVAEMNQRMVNGKPLYVALAQRKDVRKSQLE 447
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 59/139 (42%), Gaps = 18/139 (12%)
Query: 200 AKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAE 257
A ++Y+ + L E+F G + S RV + +S G+ +V Y + E
Sbjct: 47 APHSASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGE 106
Query: 258 KAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSI 317
+A++ N + G+ + +Q+ L + N+++KNLD +I
Sbjct: 107 RALEELNYTLIKGRPCRIMWSQRDPA----------------LRKTGHGNVFIKNLDIAI 150
Query: 318 DDERLRKEFTPFGTITSAK 336
D++ L F FG I S K
Sbjct: 151 DNKALHDTFAAFGNILSCK 169
>gi|115390925|ref|XP_001212967.1| polyadenylate-binding protein [Aspergillus terreus NIH2624]
gi|121739603|sp|Q0CR95.1|PABP_ASPTN RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|114193891|gb|EAU35591.1| polyadenylate-binding protein [Aspergillus terreus NIH2624]
Length = 753
Score = 338 bits (866), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 161/262 (61%), Positives = 208/262 (79%), Gaps = 1/262 (0%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D ERAL+ +N+ +KG+P RIMWSQRDP+LRK+G GNVFIKNLD +IDNKA++DTF+AFG
Sbjct: 101 DGERALEDLNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDAAIDNKALHDTFAAFG 160
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCKVAQDE GNSKGYGFVH+ET EAAN +I+ VNGMLLN K VFVG I +K+R+ +
Sbjct: 161 NILSCKVAQDEFGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISKKDRQSK 220
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPE 254
E FTNVYIKN ++ ++E+ ++MFE +G ITS + + +GKSRGFGFV Y + +
Sbjct: 221 FEEMKANFTNVYIKNLDQEISEEEFRQMFEKFGEITSATLSRDQEGKSRGFGFVNYSTHD 280
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A+ AV N KEV G+ LYVGRAQKK ER +EL++++E ++E+ ++YQGVNLYVKNL
Sbjct: 281 SAQAAVDEMNDKEVKGQKLYVGRAQKKHEREEELRKQYEAARLEKASKYQGVNLYVKNLT 340
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
D IDDE+LR+ F P+GTITSAK
Sbjct: 341 DDIDDEKLREMFAPYGTITSAK 362
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/245 (32%), Positives = 124/245 (50%), Gaps = 62/245 (25%)
Query: 107 KSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANK 166
K+ NV+IKNLD+ I + F FG I S +++D++G S+G+GFV++ T ++A
Sbjct: 225 KANFTNVYIKNLDQEISEEEFRQMFEKFGEITSATLSRDQEGKSRGFGFVNYSTHDSAQA 284
Query: 167 SIEKVNGMLLNSKIVFVGKFIPRKEREKELG--------EKAKLF--TNVYIKNFGEDFN 216
+++++N + + ++VG+ + ERE+EL EKA + N+Y+KN +D +
Sbjct: 285 AVDEMNDKEVKGQKLYVGRAQKKHEREEELRKQYEAARLEKASKYQGVNLYVKNLTDDID 344
Query: 217 DEKLKEMFEPYGTITSYRVMNND------------------------------------- 239
DEKL+EMF PYGTITS +VM +
Sbjct: 345 DEKLREMFAPYGTITSAKVMRDTNIERTQTPDSDKEKKEESKEEKPEAAEKTEEAAKESG 404
Query: 240 ---------------GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAER 284
GKS+GFGFV + SP+ A KAV N + ++GK LYV AQ+K R
Sbjct: 405 DDQDKENKKSDKKVLGKSKGFGFVCFSSPDEASKAVTEMNQRMINGKPLYVALAQRKDVR 464
Query: 285 TQELK 289
+L+
Sbjct: 465 RSQLE 469
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 118/226 (52%), Gaps = 18/226 (7%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSIEK 170
++++ LD S+ +Y+ FS+ G + S +V +D S GY +V++ +++E
Sbjct: 49 SLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALED 108
Query: 171 VNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTI 230
+N L+ K + + R ++ G+ NV+IKN +++ L + F +G I
Sbjct: 109 LNYTLIKGKPCRI-MWSQRDPALRKTGQ-----GNVFIKNLDAAIDNKALHDTFAAFGNI 162
Query: 231 TSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELK 289
S +V ++ G S+G+GFV YE+ E A A++ NG ++ K ++VG K +R +
Sbjct: 163 LSCKVAQDEFGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISKKDR----Q 218
Query: 290 RRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSA 335
+FE +K N+Y+KNLD I +E R+ F FG ITSA
Sbjct: 219 SKFEEMKANF------TNVYIKNLDQEISEEEFRQMFEKFGEITSA 258
>gi|70990636|ref|XP_750167.1| polyadenylate-binding protein [Aspergillus fumigatus Af293]
gi|74669855|sp|Q4WK03.1|PABP_ASPFU RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|66847799|gb|EAL88129.1| polyadenylate-binding protein [Aspergillus fumigatus Af293]
gi|159130644|gb|EDP55757.1| polyadenylate-binding protein [Aspergillus fumigatus A1163]
Length = 753
Score = 338 bits (866), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 160/262 (61%), Positives = 208/262 (79%), Gaps = 1/262 (0%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D ERAL+ +N+ +KG+P RIMWSQRDP+LRK+G GNVFIKNLD +IDNKA++DTF+AFG
Sbjct: 105 DGERALEDLNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDAAIDNKALHDTFAAFG 164
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCKVAQDE GNSKGYGFVH+ET EAAN +I+ VNGMLLN K VFVG I +K+R+ +
Sbjct: 165 NILSCKVAQDEFGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISKKDRQSK 224
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPE 254
E FTNVYIKN ++ DE+ ++MFE +G ITS + + +GKSRGFGFV + + +
Sbjct: 225 FEEMKANFTNVYIKNIDQEVTDEEFRKMFEKFGEITSATLSRDQEGKSRGFGFVNFSTHD 284
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A+ AV N KE+ G+ LYVGRAQKK ER +EL++++E ++E+ ++YQGVNLYVKNL
Sbjct: 285 SAQAAVDEMNDKEIKGQKLYVGRAQKKHEREEELRKQYEAARLEKASKYQGVNLYVKNLT 344
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
D +DDE+LR+ F+PFGTITSAK
Sbjct: 345 DDVDDEKLRELFSPFGTITSAK 366
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/241 (32%), Positives = 125/241 (51%), Gaps = 58/241 (24%)
Query: 107 KSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANK 166
K+ NV+IKN+D+ + ++ F FG I S +++D++G S+G+GFV+F T ++A
Sbjct: 229 KANFTNVYIKNIDQEVTDEEFRKMFEKFGEITSATLSRDQEGKSRGFGFVNFSTHDSAQA 288
Query: 167 SIEKVNGMLLNSKIVFVGKFIPRKEREKELG--------EKAKLF--TNVYIKNFGEDFN 216
+++++N + + ++VG+ + ERE+EL EKA + N+Y+KN +D +
Sbjct: 289 AVDEMNDKEIKGQKLYVGRAQKKHEREEELRKQYEAARLEKASKYQGVNLYVKNLTDDVD 348
Query: 217 DEKLKEMFEPYGTITSYRVMNND------------------------------------- 239
DEKL+E+F P+GTITS +VM +
Sbjct: 349 DEKLRELFSPFGTITSAKVMRDTVTTGETSESEKEKEKESNKENEKEGEEKTEEKPKESE 408
Query: 240 -----------GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
GKS+GFGFV + SP+ A KAV N + V+GK LYV AQ+K R +L
Sbjct: 409 EEPKKTEKKILGKSKGFGFVCFSSPDEASKAVTEMNQRMVNGKPLYVALAQRKDVRRSQL 468
Query: 289 K 289
+
Sbjct: 469 E 469
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/235 (30%), Positives = 121/235 (51%), Gaps = 18/235 (7%)
Query: 103 PSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETE 161
PS + ++++ LD S+ +Y+ FS+ G + S +V +D S GY +V++
Sbjct: 44 PSASQPHSASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNT 103
Query: 162 EAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLK 221
+++E +N L+ K I +R+ L + + NV+IKN +++ L
Sbjct: 104 ADGERALEDLNYTLIKGKPC----RIMWSQRDPALRKTGQ--GNVFIKNLDAAIDNKALH 157
Query: 222 EMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
+ F +G I S +V ++ G S+G+GFV YE+ E A A++ NG ++ K ++VG
Sbjct: 158 DTFAAFGNILSCKVAQDEFGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHIS 217
Query: 281 KAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSA 335
K +R + +FE +K N+Y+KN+D + DE RK F FG ITSA
Sbjct: 218 KKDR----QSKFEEMKANF------TNVYIKNIDQEVTDEEFRKMFEKFGEITSA 262
>gi|322711066|gb|EFZ02640.1| poly(A) RNA binding protein [Metarhizium anisopliae ARSEF 23]
Length = 743
Score = 337 bits (865), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 158/262 (60%), Positives = 209/262 (79%), Gaps = 1/262 (0%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D E+AL+ +N+ +KGRP RIMWSQRDP+LRK+G GNVFIKNLD +IDNKA++DTF+AFG
Sbjct: 114 DGEKALEELNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDVAIDNKALHDTFAAFG 173
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCKVAQDE GNSKGYGFVH+ET+EAA+++I+ VNGMLLN K V+VG IP+K+R+ +
Sbjct: 174 NILSCKVAQDENGNSKGYGFVHYETDEAAHQAIKHVNGMLLNEKKVYVGHHIPKKDRQSK 233
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPE 254
E FTN+YIKN + +D++ +E+FE YG ITS + + +GKSRGFGFV + + E
Sbjct: 234 FEEMKANFTNIYIKNISTEASDDEFRELFEKYGDITSSSLARDQEGKSRGFGFVNFTTHE 293
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A KAV+ +GK+ G+ LYVGRAQKK ER +EL++ +E ++E+ N+YQGVNLY+KNLD
Sbjct: 294 SAAKAVEELHGKDFRGQDLYVGRAQKKHEREEELRKSYEAARLEKANKYQGVNLYIKNLD 353
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
D +DDE+LR+ F FG ITSAK
Sbjct: 354 DDVDDEKLRQMFAEFGPITSAK 375
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 75/239 (31%), Positives = 118/239 (49%), Gaps = 57/239 (23%)
Query: 107 KSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANK 166
K+ N++IKN+ + + F +G I S +A+D++G S+G+GFV+F T E+A K
Sbjct: 238 KANFTNIYIKNISTEASDDEFRELFEKYGDITSSSLARDQEGKSRGFGFVNFTTHESAAK 297
Query: 167 SIEKVNGMLLNSKIVFVGKFIPRKEREKELG--------EKAKLF--TNVYIKNFGEDFN 216
++E+++G + ++VG+ + ERE+EL EKA + N+YIKN +D +
Sbjct: 298 AVEELHGKDFRGQDLYVGRAQKKHEREEELRKSYEAARLEKANKYQGVNLYIKNLDDDVD 357
Query: 217 DEKLKEMFEPYGTITSYRVMNNDGKSRG-------------------------------- 244
DEKL++MF +G ITS +VM D S G
Sbjct: 358 DEKLRQMFAEFGPITSAKVM-RDAPSDGSDDDKEKEEDNEKEPEAKEEAKETEEEDADKK 416
Query: 245 --------------FGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELK 289
FGFV + +P+ A KAV N + ++GK LYV AQ+K R +L+
Sbjct: 417 ADKKGDKKLGKSKGFGFVCFSNPDDATKAVAEMNQRMINGKPLYVALAQRKDVRKSQLE 475
Score = 45.1 bits (105), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 61/135 (45%), Gaps = 18/135 (13%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQ 261
++Y+ + L E+F G + S RV + +S G+ +V Y S EKA++
Sbjct: 61 ASLYVGELDPSVTEAMLFELFSQIGAVASIRVCRDAVTRRSLGYAYVNYNSTADGEKALE 120
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDER 321
N + G+ + +Q R L++ QG N+++KNLD +ID++
Sbjct: 121 ELNYTLIKGRPCRIMWSQ----RDPALRKTG-----------QG-NVFIKNLDVAIDNKA 164
Query: 322 LRKEFTPFGTITSAK 336
L F FG I S K
Sbjct: 165 LHDTFAAFGNILSCK 179
>gi|322698722|gb|EFY90490.1| poly(A) RNA binding protein [Metarhizium acridum CQMa 102]
Length = 742
Score = 337 bits (865), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 157/262 (59%), Positives = 209/262 (79%), Gaps = 1/262 (0%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D E+AL+ +N+ +KGRP RIMWSQRDP+LRK+G GNVFIKNLD +IDNKA++DTF+AFG
Sbjct: 113 DGEKALEELNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDVAIDNKALHDTFAAFG 172
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCKVAQDE GNSKGYGFVH+ET+EAA+++I+ VNGMLLN K V+VG IP+K+R+ +
Sbjct: 173 NILSCKVAQDENGNSKGYGFVHYETDEAAHQAIKHVNGMLLNEKKVYVGHHIPKKDRQSK 232
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPE 254
E FTN+Y+KN + +D++ +E+FE YG ITS + + +GKSRGFGFV + + E
Sbjct: 233 FEEMKANFTNIYVKNISTEASDDEFRELFEKYGDITSSSLARDQEGKSRGFGFVNFTTHE 292
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A KAV+ +GK+ G+ LYVGRAQKK ER +EL++ +E ++E+ N+YQGVNLY+KNLD
Sbjct: 293 SAAKAVEELHGKDFRGQDLYVGRAQKKHEREEELRKSYEAARLEKANKYQGVNLYIKNLD 352
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
D +DDE+LR+ F FG ITSAK
Sbjct: 353 DDVDDEKLRQMFAEFGPITSAK 374
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 74/239 (30%), Positives = 118/239 (49%), Gaps = 57/239 (23%)
Query: 107 KSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANK 166
K+ N+++KN+ + + F +G I S +A+D++G S+G+GFV+F T E+A K
Sbjct: 237 KANFTNIYVKNISTEASDDEFRELFEKYGDITSSSLARDQEGKSRGFGFVNFTTHESAAK 296
Query: 167 SIEKVNGMLLNSKIVFVGKFIPRKEREKELG--------EKAKLF--TNVYIKNFGEDFN 216
++E+++G + ++VG+ + ERE+EL EKA + N+YIKN +D +
Sbjct: 297 AVEELHGKDFRGQDLYVGRAQKKHEREEELRKSYEAARLEKANKYQGVNLYIKNLDDDVD 356
Query: 217 DEKLKEMFEPYGTITSYRVMNNDGKSRG-------------------------------- 244
DEKL++MF +G ITS +VM D S G
Sbjct: 357 DEKLRQMFAEFGPITSAKVM-RDAPSDGSDDDKEKEEDNEKEPEAKEEAKETEEEDADKK 415
Query: 245 --------------FGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELK 289
FGFV + +P+ A KAV N + ++GK LYV AQ+K R +L+
Sbjct: 416 ADKKGDKKLGKSKGFGFVCFSNPDDATKAVAEMNQRMINGKPLYVALAQRKDVRKSQLE 474
Score = 45.1 bits (105), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 61/135 (45%), Gaps = 18/135 (13%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQ 261
++Y+ + L E+F G + S RV + +S G+ +V Y S EKA++
Sbjct: 60 ASLYVGELDPSVTEAMLFELFSQIGAVASIRVCRDAVTRRSLGYAYVNYNSTADGEKALE 119
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDER 321
N + G+ + +Q R L++ QG N+++KNLD +ID++
Sbjct: 120 ELNYTLIKGRPCRIMWSQ----RDPALRKTG-----------QG-NVFIKNLDVAIDNKA 163
Query: 322 LRKEFTPFGTITSAK 336
L F FG I S K
Sbjct: 164 LHDTFAAFGNILSCK 178
>gi|119496945|ref|XP_001265244.1| polyadenylate-binding protein [Neosartorya fischeri NRRL 181]
gi|158512647|sp|A1D4K4.1|PABP_NEOFI RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|119413406|gb|EAW23347.1| polyadenylate-binding protein [Neosartorya fischeri NRRL 181]
Length = 751
Score = 337 bits (865), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 160/262 (61%), Positives = 208/262 (79%), Gaps = 1/262 (0%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D ERAL+ +N+ +KG+P RIMWSQRDP+LRK+G GNVFIKNLD +IDNKA++DTF+AFG
Sbjct: 105 DGERALEDLNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDAAIDNKALHDTFAAFG 164
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCKVAQDE GNSKGYGFVH+ET EAAN +I+ VNGMLLN K VFVG I +K+R+ +
Sbjct: 165 NILSCKVAQDEFGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISKKDRQSK 224
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPE 254
E FTNVYIKN ++ DE+ ++MFE +G ITS + + +GKSRGFGFV + + +
Sbjct: 225 FEEMKANFTNVYIKNIDQEVTDEEFRKMFEKFGEITSATLSRDQEGKSRGFGFVNFSTHD 284
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A+ AV N KE+ G+ LYVGRAQKK ER +EL++++E ++E+ ++YQGVNLYVKNL
Sbjct: 285 SAQAAVDEMNDKEIKGQKLYVGRAQKKHEREEELRKQYEAARLEKASKYQGVNLYVKNLT 344
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
D +DDE+LR+ F+PFGTITSAK
Sbjct: 345 DDVDDEKLRELFSPFGTITSAK 366
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/239 (32%), Positives = 125/239 (52%), Gaps = 56/239 (23%)
Query: 107 KSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANK 166
K+ NV+IKN+D+ + ++ F FG I S +++D++G S+G+GFV+F T ++A
Sbjct: 229 KANFTNVYIKNIDQEVTDEEFRKMFEKFGEITSATLSRDQEGKSRGFGFVNFSTHDSAQA 288
Query: 167 SIEKVNGMLLNSKIVFVGKFIPRKEREKELG--------EKAKLF--TNVYIKNFGEDFN 216
+++++N + + ++VG+ + ERE+EL EKA + N+Y+KN +D +
Sbjct: 289 AVDEMNDKEIKGQKLYVGRAQKKHEREEELRKQYEAARLEKASKYQGVNLYVKNLTDDVD 348
Query: 217 DEKLKEMFEPYGTITSYRVMNND------------------------------------- 239
DEKL+E+F P+GTITS +VM +
Sbjct: 349 DEKLRELFSPFGTITSAKVMRDTVTAGETSESEKEKESNKENEKEGEEKTEEKPKESEEE 408
Query: 240 ---------GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELK 289
GKS+GFGFV + SP+ A KAV N + V+GK LYV AQ+K R +L+
Sbjct: 409 AKKTEKKILGKSKGFGFVCFSSPDEASKAVTEMNQRMVNGKPLYVALAQRKDVRRSQLE 467
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 71/235 (30%), Positives = 121/235 (51%), Gaps = 18/235 (7%)
Query: 103 PSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETE 161
PS + ++++ LD S+ +Y+ FS+ G + S +V +D S GY +V++
Sbjct: 44 PSANQPHSASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNT 103
Query: 162 EAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLK 221
+++E +N L+ K I +R+ L + + NV+IKN +++ L
Sbjct: 104 ADGERALEDLNYTLIKGKPC----RIMWSQRDPALRKTGQ--GNVFIKNLDAAIDNKALH 157
Query: 222 EMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
+ F +G I S +V ++ G S+G+GFV YE+ E A A++ NG ++ K ++VG
Sbjct: 158 DTFAAFGNILSCKVAQDEFGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHIS 217
Query: 281 KAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSA 335
K +R + +FE +K N+Y+KN+D + DE RK F FG ITSA
Sbjct: 218 KKDR----QSKFEEMKANF------TNVYIKNIDQEVTDEEFRKMFEKFGEITSA 262
>gi|361128049|gb|EHL00002.1| putative Polyadenylate-binding protein, cytoplasmic and nuclear
[Glarea lozoyensis 74030]
Length = 783
Score = 337 bits (863), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 159/263 (60%), Positives = 206/263 (78%), Gaps = 2/263 (0%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D E+AL+ +N+ +KGRP RIMWSQRDP+LRK+G GNVFIKNLD +IDNKA++DTF+AFG
Sbjct: 115 DGEKALEELNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDTAIDNKALHDTFAAFG 174
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCKVAQDE G SKGYGFVH+ET+EAA+++I+ VNGMLLN K VFVG IP+K+R+ +
Sbjct: 175 NILSCKVAQDESGASKGYGFVHYETDEAASQAIKHVNGMLLNEKKVFVGHHIPKKDRQSK 234
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND--GKSRGFGFVAYESP 253
E FTN+Y+KN + DE+ +E+FE +G +TS + + GKSRGFGFV + +
Sbjct: 235 FEEMKANFTNIYVKNIPVEATDEEFRELFEKFGDVTSASLARDQDTGKSRGFGFVNFINH 294
Query: 254 EFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNL 313
E A AV NGK+ G+ LYVGRAQKK ER +EL++ +E +IE+ ++YQGVNLYVKNL
Sbjct: 295 EHAATAVDELNGKDFKGQDLYVGRAQKKHEREEELRKSYEAARIEKASKYQGVNLYVKNL 354
Query: 314 DDSIDDERLRKEFTPFGTITSAK 336
DD +DDE+LR+ FTPFG ITSAK
Sbjct: 355 DDDVDDEKLRELFTPFGAITSAK 377
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 118/239 (49%), Gaps = 56/239 (23%)
Query: 107 KSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQ-GNSKGYGFVHFETEEAAN 165
K+ N+++KN+ ++ + F FG + S +A+D+ G S+G+GFV+F E A
Sbjct: 239 KANFTNIYVKNIPVEATDEEFRELFEKFGDVTSASLARDQDTGKSRGFGFVNFINHEHAA 298
Query: 166 KSIEKVNGMLLNSKIVFVGKFIPRKEREKELG--------EKAKLF--TNVYIKNFGEDF 215
+++++NG + ++VG+ + ERE+EL EKA + N+Y+KN +D
Sbjct: 299 TAVDELNGKDFKGQDLYVGRAQKKHEREEELRKSYEAARIEKASKYQGVNLYVKNLDDDV 358
Query: 216 NDEKLKEMFEPYGTITSYRVMNND------------------------------------ 239
+DEKL+E+F P+G ITS +VM +
Sbjct: 359 DDEKLRELFTPFGAITSAKVMRDSAAETAEAEKKEEEKNKENKKEGDAEEGEKADGEKKE 418
Query: 240 ---------GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELK 289
GKS+GFGFV + +P+ A KA+ N V+GK LYV AQ+K R +L+
Sbjct: 419 APKSEKRTVGKSKGFGFVCFSNPDEATKAIADMNQNMVNGKPLYVALAQRKDVRKGQLE 477
Score = 44.3 bits (103), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 62/135 (45%), Gaps = 18/135 (13%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQ 261
++Y+ + L E+F G++ S RV + +S G+ +V Y + EKA++
Sbjct: 62 ASLYVGELDPSVTEAMLFELFSQIGSVASIRVCRDAVTRRSLGYAYVNYNTTTDGEKALE 121
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDER 321
N + G+ + +Q R L++ QG N+++KNLD +ID++
Sbjct: 122 ELNYTLIKGRPCRIMWSQ----RDPALRKTG-----------QG-NVFIKNLDTAIDNKA 165
Query: 322 LRKEFTPFGTITSAK 336
L F FG I S K
Sbjct: 166 LHDTFAAFGNILSCK 180
>gi|440638008|gb|ELR07927.1| hypothetical protein GMDG_02786 [Geomyces destructans 20631-21]
Length = 805
Score = 336 bits (862), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 156/263 (59%), Positives = 208/263 (79%), Gaps = 1/263 (0%)
Query: 75 LDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAF 134
+D E+AL+ +N+ +KGRP RIMWSQRDP+LRK+G GNVFIKNLD +IDNKA++DTF+AF
Sbjct: 114 IDGEKALEELNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDVAIDNKALHDTFAAF 173
Query: 135 GSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREK 194
G+ILSCKVAQDE GNSKGYGFVH+ET+EAA+++I+ VNGMLLN K VFVG IP+K+R+
Sbjct: 174 GNILSCKVAQDESGNSKGYGFVHYETDEAASQAIKHVNGMLLNEKKVFVGHHIPKKDRQS 233
Query: 195 ELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GKSRGFGFVAYESP 253
+ E FTN+Y+KN D D++ +E+FE +G +TS + ++ GK+RGFGFV + +
Sbjct: 234 KFEEMKANFTNIYVKNIPADATDDQFRELFEKFGDVTSASLARDEAGKNRGFGFVNFINH 293
Query: 254 EFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNL 313
E A AV NGK+ G+ LYVGRAQKK ER +EL++ +E +IE+ ++YQGVNLYVKNL
Sbjct: 294 EHASAAVDELNGKDFMGQDLYVGRAQKKHEREEELRKSYEAARIEKASKYQGVNLYVKNL 353
Query: 314 DDSIDDERLRKEFTPFGTITSAK 336
+D +DDE+LR+ F P+G ITSAK
Sbjct: 354 EDDVDDEKLRELFAPYGAITSAK 376
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 34/50 (68%)
Query: 240 GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELK 289
GKS+GFGFV + +P+ A KAV N + V+GK LYV AQ+K R +L+
Sbjct: 447 GKSKGFGFVCFNNPDEATKAVTEMNQRMVNGKPLYVALAQRKDVRKSQLE 496
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 62/135 (45%), Gaps = 18/135 (13%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQ 261
++Y+ + L E+F G++ S RV + +S G+ +V Y + EKA++
Sbjct: 62 ASLYVGELDPSVTEAMLFELFSQIGSVASIRVCRDAVTRRSLGYAYVNYNTTIDGEKALE 121
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDER 321
N + G+ + +Q R L++ QG N+++KNLD +ID++
Sbjct: 122 ELNYTLIKGRPCRIMWSQ----RDPALRKTG-----------QG-NVFIKNLDVAIDNKA 165
Query: 322 LRKEFTPFGTITSAK 336
L F FG I S K
Sbjct: 166 LHDTFAAFGNILSCK 180
>gi|358386241|gb|EHK23837.1| hypothetical protein TRIVIDRAFT_169516 [Trichoderma virens Gv29-8]
Length = 747
Score = 336 bits (861), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 158/262 (60%), Positives = 207/262 (79%), Gaps = 1/262 (0%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D E+AL+ +N+ +KGRP RIMWSQRDP+LRK+G GNVFIKNLD +IDNKA++DTF+AFG
Sbjct: 112 DGEKALEELNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDVAIDNKALHDTFAAFG 171
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCKVAQDE GNSKGYGFVH+ET+EAA ++I+ VNGMLLN K V+VG IP+K+R+ +
Sbjct: 172 NILSCKVAQDENGNSKGYGFVHYETDEAAAQAIKHVNGMLLNEKKVYVGYHIPKKDRQSK 231
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPE 254
E FTNVY+KN G D D++ +E+FE +G +TS + + +GK RGFGFV + + E
Sbjct: 232 FEEMKANFTNVYVKNIGPDVTDDEFRELFEKFGDVTSSSLARDQEGKPRGFGFVNFTTHE 291
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A KAV+ NGK+ G+ LYVGRAQKK ER +EL++ +E ++E+ N+YQGVNLY+KNLD
Sbjct: 292 AAFKAVEDLNGKDFRGQELYVGRAQKKHEREEELRKSYEAARLEKANKYQGVNLYIKNLD 351
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
D +DDE+LR+ F FG ITSAK
Sbjct: 352 DDVDDEKLRQMFAEFGPITSAK 373
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 76/236 (32%), Positives = 119/236 (50%), Gaps = 53/236 (22%)
Query: 107 KSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANK 166
K+ NV++KN+ + + + F FG + S +A+D++G +G+GFV+F T EAA K
Sbjct: 236 KANFTNVYVKNIGPDVTDDEFRELFEKFGDVTSSSLARDQEGKPRGFGFVNFTTHEAAFK 295
Query: 167 SIEKVNGMLLNSKIVFVGKFIPRKEREKELG--------EKAKLF--TNVYIKNFGEDFN 216
++E +NG + ++VG+ + ERE+EL EKA + N+YIKN +D +
Sbjct: 296 AVEDLNGKDFRGQELYVGRAQKKHEREEELRKSYEAARLEKANKYQGVNLYIKNLDDDVD 355
Query: 217 DEKLKEMFEPYGTITSYRVMNND------------------------------------- 239
DEKL++MF +G ITS +VM +
Sbjct: 356 DEKLRQMFAEFGPITSAKVMRDTPQEGEEEVKDQEKDKENQKEAENEAESAESAEKKAEK 415
Query: 240 ------GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELK 289
GKS+GFGFV + +P+ A KAV N + ++ K LYV AQ+K R +L+
Sbjct: 416 KSDKKLGKSKGFGFVCFSNPDDATKAVAEMNQRMINNKPLYVALAQRKDVRKSQLE 471
Score = 45.1 bits (105), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 61/135 (45%), Gaps = 18/135 (13%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQ 261
++Y+ + L E+F G + S RV + +S G+ +V Y S EKA++
Sbjct: 59 ASLYVGELDPSVTEAMLFELFSQIGAVASIRVCRDAVTRRSLGYAYVNYNSTPDGEKALE 118
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDER 321
N + G+ + +Q R L++ QG N+++KNLD +ID++
Sbjct: 119 ELNYTLIKGRPCRIMWSQ----RDPALRKTG-----------QG-NVFIKNLDVAIDNKA 162
Query: 322 LRKEFTPFGTITSAK 336
L F FG I S K
Sbjct: 163 LHDTFAAFGNILSCK 177
>gi|380494250|emb|CCF33289.1| Poly(A) RNA binding protein [Colletotrichum higginsianum]
Length = 677
Score = 335 bits (860), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 156/262 (59%), Positives = 207/262 (79%), Gaps = 1/262 (0%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D E+AL+ +N+ +KGRP RIMWSQRDP+LRK+G GNVFIKNLD +IDNKA++DTF+AFG
Sbjct: 117 DGEKALEELNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDVAIDNKALHDTFAAFG 176
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCKVAQDE GNSKGYGFVH+ET+EAA+++I+ VNGMLLN K V+VG IP+K+R+ +
Sbjct: 177 NILSCKVAQDENGNSKGYGFVHYETDEAASQAIKHVNGMLLNEKKVYVGHHIPKKDRQSK 236
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPE 254
E FTN+YIKN + D++ +++F P+G +TS + + +GKSRGFGFV + + E
Sbjct: 237 FEEMKANFTNIYIKNISGEVTDDEFRDLFTPFGDVTSSSLARDQEGKSRGFGFVNFTTHE 296
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A KAV NGK+ G+ LYVGRAQKK ER +EL++ +E ++E+ N+YQGVNLY+KNLD
Sbjct: 297 AAAKAVDDLNGKDFRGQDLYVGRAQKKHEREEELRKSYEAARMEKANKYQGVNLYIKNLD 356
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
D +DDE+LR+ F FG ITSAK
Sbjct: 357 DDVDDEKLRQLFADFGPITSAK 378
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 78/246 (31%), Positives = 123/246 (50%), Gaps = 63/246 (25%)
Query: 107 KSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANK 166
K+ N++IKN+ + + D F+ FG + S +A+D++G S+G+GFV+F T EAA K
Sbjct: 241 KANFTNIYIKNISGEVTDDEFRDLFTPFGDVTSSSLARDQEGKSRGFGFVNFTTHEAAAK 300
Query: 167 SIEKVNGMLLNSKIVFVGKFIPRKEREKELG--------EKAKLF--TNVYIKNFGEDFN 216
+++ +NG + ++VG+ + ERE+EL EKA + N+YIKN +D +
Sbjct: 301 AVDDLNGKDFRGQDLYVGRAQKKHEREEELRKSYEAARMEKANKYQGVNLYIKNLDDDVD 360
Query: 217 DEKLKEMFEPYGTITSYRVMNND------------------------------------- 239
DEKL+++F +G ITS +VM ++
Sbjct: 361 DEKLRQLFADFGPITSAKVMRDNATDSGNEDEGSSEEKETEAKKDEEEEEKPEEAKTDDK 420
Query: 240 ----------------GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAE 283
GKS+GFGFV + +P+ A KAV N + V+GK LYV AQ+K
Sbjct: 421 EDADKKSDKKSDKKLHGKSKGFGFVCFSNPDDATKAVAEMNQRMVNGKPLYVALAQRKDV 480
Query: 284 RTQELK 289
R +L+
Sbjct: 481 RKSQLE 486
Score = 45.1 bits (105), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 62/135 (45%), Gaps = 18/135 (13%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQ 261
++Y+ + L E+F G++ S RV + +S G+ +V Y + EKA++
Sbjct: 64 ASLYVGELDPSVTEAMLFELFSQIGSVASIRVCRDAVTRRSLGYAYVNYNTTSDGEKALE 123
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDER 321
N + G+ + +Q R L++ QG N+++KNLD +ID++
Sbjct: 124 ELNYTLIKGRPCRIMWSQ----RDPALRKTG-----------QG-NVFIKNLDVAIDNKA 167
Query: 322 LRKEFTPFGTITSAK 336
L F FG I S K
Sbjct: 168 LHDTFAAFGNILSCK 182
>gi|336276750|ref|XP_003353128.1| hypothetical protein SMAC_03445 [Sordaria macrospora k-hell]
gi|380092612|emb|CCC09889.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 754
Score = 335 bits (860), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 154/262 (58%), Positives = 206/262 (78%), Gaps = 1/262 (0%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D E+AL+ +N+ +KGRP RIMWSQRDP+LRK+G GN+FIKNLD +IDNKA++DTF+AFG
Sbjct: 114 DGEKALEELNYTLIKGRPCRIMWSQRDPALRKTGAGNIFIKNLDAAIDNKALHDTFAAFG 173
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCKVAQDE GNSKGYGFVH+ET+EAA+++I+ VNGMLLN K V+VG IP+K+R+ +
Sbjct: 174 NILSCKVAQDEHGNSKGYGFVHYETDEAASQAIKHVNGMLLNEKKVYVGHHIPKKDRQSK 233
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPE 254
E FTNVY+KN + D++ +E+FE +G +TS + + +GK+RGFGFV + + E
Sbjct: 234 FEEMKANFTNVYVKNINHEVTDDEFRELFEKFGEVTSSSLARDQEGKTRGFGFVNFTTHE 293
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A KAV NGK+ G+ LYVGRAQKK ER +EL+R +E ++E+ N+YQGVNLY+KNL
Sbjct: 294 AAAKAVDDLNGKDFRGQDLYVGRAQKKHEREEELRRSYEAARLEKANKYQGVNLYIKNLG 353
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
D +DDE+LR F+ +G ITSAK
Sbjct: 354 DDVDDEKLRAMFSEYGPITSAK 375
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 80/235 (34%), Positives = 122/235 (51%), Gaps = 52/235 (22%)
Query: 107 KSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANK 166
K+ NV++KN++ + + + F FG + S +A+D++G ++G+GFV+F T EAA K
Sbjct: 238 KANFTNVYVKNINHEVTDDEFRELFEKFGEVTSSSLARDQEGKTRGFGFVNFTTHEAAAK 297
Query: 167 SIEKVNGMLLNSKIVFVGKFIPRKEREKELG--------EKAKLF--TNVYIKNFGEDFN 216
+++ +NG + ++VG+ + ERE+EL EKA + N+YIKN G+D +
Sbjct: 298 AVDDLNGKDFRGQDLYVGRAQKKHEREEELRRSYEAARLEKANKYQGVNLYIKNLGDDVD 357
Query: 217 DEKLKEMFEPYGTITSYRVMNND------------------------------------- 239
DEKL+ MF YG ITS +VM +
Sbjct: 358 DEKLRAMFSEYGPITSAKVMRDSLIEGEEKDEKDKENKKEGETKEEEEKEGSAEKKTEKK 417
Query: 240 -----GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELK 289
GKS+GFGFV + +P+ A KAV N + VDGK LYV AQ+K R +L+
Sbjct: 418 GDRKLGKSKGFGFVCFSNPDDATKAVTEMNQRMVDGKPLYVALAQRKDVRKSQLE 472
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 59/135 (43%), Gaps = 18/135 (13%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQ 261
++Y+ + L E+F G++ S RV + +S G+ +V Y + EKA++
Sbjct: 61 ASLYVGELDPSVTEAMLFELFSQIGSVASIRVCRDAVTRRSLGYAYVNYNTTADGEKALE 120
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDER 321
N + G+ + +Q+ L + N+++KNLD +ID++
Sbjct: 121 ELNYTLIKGRPCRIMWSQRDPA----------------LRKTGAGNIFIKNLDAAIDNKA 164
Query: 322 LRKEFTPFGTITSAK 336
L F FG I S K
Sbjct: 165 LHDTFAAFGNILSCK 179
>gi|335293857|ref|XP_003357073.1| PREDICTED: polyadenylate-binding protein 4-like [Sus scrofa]
Length = 370
Score = 335 bits (860), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 165/274 (60%), Positives = 214/274 (78%), Gaps = 7/274 (2%)
Query: 69 LGQPY-----MLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSID 123
LG Y + D ++ALDTMNFD +KG+ IR+MWSQRD LRKSG+GNVFIKNLDKSID
Sbjct: 51 LGYAYVNFLQLADAQKALDTMNFDLIKGKSIRLMWSQRDAYLRKSGIGNVFIKNLDKSID 110
Query: 124 NKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFV 183
NK +Y+ FSAFG ILS KV D+QG S+GY FVHF+ + AA+++IE++NG LL +FV
Sbjct: 111 NKTLYEHFSAFGKILSSKVMSDDQG-SRGYAFVHFQNQIAADRAIEEMNGALLKDCRLFV 169
Query: 184 GKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKS 242
G+F RK+RE EL KA FTNVYIKNFG+D +DE+LKE+F YG S +VM ++ GKS
Sbjct: 170 GRFKNRKDREAELQNKANEFTNVYIKNFGDDMDDERLKEVFSKYGKTLSVKVMRDSSGKS 229
Query: 243 RGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNR 302
+GFGFV+++S E A+KAV+ NGK+++G++L+VGRAQKKAER ELK+ FE LK ER R
Sbjct: 230 KGFGFVSFDSHEAAKKAVEEMNGKDINGQLLFVGRAQKKAERQAELKQMFEQLKRERFRR 289
Query: 303 YQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
QGV LY+KNLD++IDDE+LR+EF+ FG+I+ K
Sbjct: 290 CQGVKLYIKNLDETIDDEKLRREFSSFGSISRVK 323
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 71/179 (39%), Positives = 111/179 (62%), Gaps = 10/179 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV+IKN +D++ + + FS +G LS KV +D G SKG+GFV F++ EAA K++E++
Sbjct: 191 NVYIKNFGDDMDDERLKEVFSKYGKTLSVKVMRDSSGKSKGFGFVSFDSHEAAKKAVEEM 250
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGE-----KAKLF-----TNVYIKNFGEDFNDEKLK 221
NG +N +++FVG+ + ER+ EL + K + F +YIKN E +DEKL+
Sbjct: 251 NGKDINGQLLFVGRAQKKAERQAELKQMFEQLKRERFRRCQGVKLYIKNLDETIDDEKLR 310
Query: 222 EMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
F +G+I+ +VM +G+S+GFG + + SPE A KA+ NG+ + K L + AQK
Sbjct: 311 REFSSFGSISRVKVMQEEGRSKGFGLICFSSPEEATKAMTEMNGRILGSKPLNIALAQK 369
Score = 100 bits (249), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 119/227 (52%), Gaps = 17/227 (7%)
Query: 111 GNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQD-EQGNSKGYGFVHFETEEAANKSIE 169
++++ +L + ++ FS G +LS ++ +D S GY +V+F A K+++
Sbjct: 10 ASLYVGDLHADVTEDLLFKKFSTVGPVLSIRICRDLVTRRSLGYAYVNFLQLADAQKALD 69
Query: 170 KVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGT 229
+N L+ GK I +++ + NV+IKN + +++ L E F +G
Sbjct: 70 TMNFDLIK------GKSIRLMWSQRDAYLRKSGIGNVFIKNLDKSIDNKTLYEHFSAFGK 123
Query: 230 ITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELK 289
I S +VM++D SRG+ FV +++ A++A++ NG + L+VGR + + +R EL+
Sbjct: 124 ILSSKVMSDDQGSRGYAFVHFQNQIAADRAIEEMNGALLKDCRLFVGRFKNRKDREAELQ 183
Query: 290 RRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ N + N+Y+KN D +DDERL++ F+ +G S K
Sbjct: 184 --------NKANEF--TNVYIKNFGDDMDDERLKEVFSKYGKTLSVK 220
>gi|17567133|ref|NP_510260.1| Protein PAB-2, isoform a [Caenorhabditis elegans]
gi|3876085|emb|CAA90444.1| Protein PAB-2, isoform a [Caenorhabditis elegans]
Length = 692
Score = 335 bits (859), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 167/281 (59%), Positives = 211/281 (75%), Gaps = 5/281 (1%)
Query: 59 QLGSGAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNL 118
+L G V QP D ERALDTMNF+ + GRP+RIMWSQRDP+ R++G GN+FIKNL
Sbjct: 95 RLSLGYAYVNFQQP--ADAERALDTMNFEVIHGRPMRIMWSQRDPAARRAGNGNIFIKNL 152
Query: 119 DKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNS 178
D+ IDNK++YDTFS FG+ILSCKVA D++GNSKGYGFVHFETE +A +IEKVNGMLL+
Sbjct: 153 DRVIDNKSVYDTFSLFGNILSCKVATDDEGNSKGYGFVHFETEHSAQTAIEKVNGMLLSD 212
Query: 179 KIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN 238
K V+VGKF PR +R KELGE +TNV++KNFGE + EKL MF +G ITS VM +
Sbjct: 213 KKVYVGKFQPRAQRMKELGESGLKYTNVFVKNFGEHLDQEKLSAMFSKFGEITSAVVMTD 272
Query: 239 -DGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGK--ILYVGRAQKKAERTQELKRRFEML 295
GK +GFGFVA+ + A +AV+ N ++G L V RAQKK+ER+ ELKR++E L
Sbjct: 273 AQGKPKGFGFVAFADQDAAGQAVEKLNDSILEGTDCKLSVCRAQKKSERSAELKRKYEAL 332
Query: 296 KIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
K ER+ RYQGVNLYVKN+++ ++D+ LR F+ FGTITSAK
Sbjct: 333 KQERVQRYQGVNLYVKNIEEDLNDDGLRDHFSSFGTITSAK 373
Score = 134 bits (336), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 80/209 (38%), Positives = 118/209 (56%), Gaps = 15/209 (7%)
Query: 99 SQRDPSLRKSGV--GNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFV 156
+QR L +SG+ NVF+KN + +D + + FS FG I S V D QG KG+GFV
Sbjct: 224 AQRMKELGESGLKYTNVFVKNFGEHLDQEKLSAMFSKFGEITSAVVMTDAQGKPKGFGFV 283
Query: 157 HFETEEAANKSIEKVNGMLLNSK--IVFVGKFIPRKEREKELGEKAKLF----------T 204
F ++AA +++EK+N +L + V + + ER EL K +
Sbjct: 284 AFADQDAAGQAVEKLNDSILEGTDCKLSVCRAQKKSERSAELKRKYEALKQERVQRYQGV 343
Query: 205 NVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPEFAEKAVQAW 263
N+Y+KN ED ND+ L++ F +GTITS +VM + +G+S+GFGFV +E PE A AV
Sbjct: 344 NLYVKNIEEDLNDDGLRDHFSSFGTITSAKVMVDENGRSKGFGFVCFEKPEEATAAVTDM 403
Query: 264 NGKEVDGKILYVGRAQKKAERTQELKRRF 292
N K + K LYV AQ+K +R +L ++
Sbjct: 404 NSKMIGAKPLYVALAQRKEDRRAQLASQY 432
>gi|291401234|ref|XP_002716993.1| PREDICTED: poly(A) binding protein, cytoplasmic 4-like [Oryctolagus
cuniculus]
Length = 370
Score = 335 bits (859), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 166/274 (60%), Positives = 211/274 (77%), Gaps = 7/274 (2%)
Query: 69 LGQPY-----MLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSID 123
LG Y + D ++ALDTMNFD +KG+ IR+MWSQRD LRKSG+GNVFIKNLDKSID
Sbjct: 51 LGYAYVNFLQLADAQKALDTMNFDVVKGKAIRLMWSQRDAYLRKSGIGNVFIKNLDKSID 110
Query: 124 NKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFV 183
NK++Y+ FSAFG ILS KV D++G SKGY FVHF+++ AA+++IE++NG L VFV
Sbjct: 111 NKSLYECFSAFGKILSSKVMSDDRG-SKGYAFVHFQSQSAADRAIEEMNGKFLKDCKVFV 169
Query: 184 GKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GKS 242
G+F RK+RE EL KA FTNVYIKNFG+D +DE+L+E+F YG I S +VM N GKS
Sbjct: 170 GRFKSRKDREAELRNKASEFTNVYIKNFGDDMDDERLREVFSTYGRILSVKVMTNSCGKS 229
Query: 243 RGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNR 302
RGFGFV+++S E A KAV+ NGKEV+G+ ++VGRAQKK ER ELK+ FE LK ER+
Sbjct: 230 RGFGFVSFDSHEAARKAVEEMNGKEVNGQPIFVGRAQKKVERQAELKQMFEQLKKERIRG 289
Query: 303 YQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
QG LY+KNLD++IDDE+LRKEF+ FG+I+ K
Sbjct: 290 CQGAKLYIKNLDENIDDEKLRKEFSSFGSISRVK 323
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 75/219 (34%), Positives = 124/219 (56%), Gaps = 16/219 (7%)
Query: 77 TERALDTMNFDALKGRPIRI----MWSQRDPSLRK--SGVGNVFIKNLDKSIDNKAMYDT 130
+RA++ MN LK + + R+ LR S NV+IKN +D++ + +
Sbjct: 150 ADRAIEEMNGKFLKDCKVFVGRFKSRKDREAELRNKASEFTNVYIKNFGDDMDDERLREV 209
Query: 131 FSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRK 190
FS +G ILS KV + G S+G+GFV F++ EAA K++E++NG +N + +FVG+ +
Sbjct: 210 FSTYGRILSVKVMTNSCGKSRGFGFVSFDSHEAARKAVEEMNGKEVNGQPIFVGRAQKKV 269
Query: 191 EREKELGEKAKLF----------TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDG 240
ER+ EL + + +YIKN E+ +DEKL++ F +G+I+ +VM +G
Sbjct: 270 ERQAELKQMFEQLKKERIRGCQGAKLYIKNLDENIDDEKLRKEFSSFGSISRVKVMQEEG 329
Query: 241 KSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQ 279
+S+GFG + + S E A +A+ NG+ + K L + AQ
Sbjct: 330 QSKGFGLICFSSSEDAARAMTVMNGRILGSKPLNIALAQ 368
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 121/228 (53%), Gaps = 17/228 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQD-EQGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + ++ FS G +LS ++ +D S GY +V+F A K++
Sbjct: 9 MASLYVGDLHSDVTEDLLFKKFSRVGPVLSIRICRDLVTRRSLGYAYVNFLQLADAQKAL 68
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N ++ GK I +++ + NV+IKN + +++ L E F +G
Sbjct: 69 DTMNFDVVK------GKAIRLMWSQRDAYLRKSGIGNVFIKNLDKSIDNKSLYECFSAFG 122
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S +VM++D S+G+ FV ++S A++A++ NGK + ++VGR + + +R EL
Sbjct: 123 KILSSKVMSDDRGSKGYAFVHFQSQSAADRAIEEMNGKFLKDCKVFVGRFKSRKDREAEL 182
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ + + N+Y+KN D +DDERLR+ F+ +G I S K
Sbjct: 183 RNKAS----------EFTNVYIKNFGDDMDDERLREVFSTYGRILSVK 220
>gi|340517112|gb|EGR47358.1| polyadenylate-binding protein [Trichoderma reesei QM6a]
Length = 745
Score = 335 bits (859), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 157/262 (59%), Positives = 206/262 (78%), Gaps = 1/262 (0%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D E+AL+ +N+ +KGRP RIMWSQRDP+LRK+G GNVFIKNLD +IDNKA++DTF+AFG
Sbjct: 112 DGEKALEELNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDVAIDNKALHDTFAAFG 171
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCKVAQDE GNSKGYGFVH+ET+EAA ++I+ VNGMLLN K V+VG IP+K+R+ +
Sbjct: 172 NILSCKVAQDENGNSKGYGFVHYETDEAAAQAIKHVNGMLLNEKKVYVGYHIPKKDRQSK 231
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPE 254
E FTNVY+KN D DE +++FE +G +TS + + +GK+RGFGFV + + E
Sbjct: 232 FEEMKANFTNVYVKNIAPDVTDEDFRQLFEKFGDVTSSSLARDQEGKTRGFGFVNFTTHE 291
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A KAV+ NGK+ G+ LYVGRAQKK ER +EL++ +E ++E+ N+YQGVNLY+KNLD
Sbjct: 292 AAFKAVEELNGKDFRGQDLYVGRAQKKHEREEELRKSYEAARLEKANKYQGVNLYIKNLD 351
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
D +DDE+LR+ F FG ITSAK
Sbjct: 352 DDVDDEKLRQMFAEFGPITSAK 373
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 76/236 (32%), Positives = 121/236 (51%), Gaps = 53/236 (22%)
Query: 107 KSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANK 166
K+ NV++KN+ + ++ F FG + S +A+D++G ++G+GFV+F T EAA K
Sbjct: 236 KANFTNVYVKNIAPDVTDEDFRQLFEKFGDVTSSSLARDQEGKTRGFGFVNFTTHEAAFK 295
Query: 167 SIEKVNGMLLNSKIVFVGKFIPRKEREKELG--------EKAKLF--TNVYIKNFGEDFN 216
++E++NG + ++VG+ + ERE+EL EKA + N+YIKN +D +
Sbjct: 296 AVEELNGKDFRGQDLYVGRAQKKHEREEELRKSYEAARLEKANKYQGVNLYIKNLDDDVD 355
Query: 217 DEKLKEMFEPYGTITSYRVMNND------------------------------------- 239
DEKL++MF +G ITS +VM +
Sbjct: 356 DEKLRQMFAEFGPITSAKVMRDVPQEGEEEAKDQEKDKENQKEGEKEGESAEGAEKKTEK 415
Query: 240 ------GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELK 289
GKS+GFGFV + +P+ A KAV N + ++ K LYV AQ+K R +L+
Sbjct: 416 KSDKKLGKSKGFGFVCFSNPDDATKAVAEMNQRMINNKPLYVALAQRKDVRKSQLE 471
Score = 45.1 bits (105), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 61/135 (45%), Gaps = 18/135 (13%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQ 261
++Y+ + L E+F G + S RV + +S G+ +V Y S EKA++
Sbjct: 59 ASLYVGELDPSVTEAMLFELFSQIGAVASIRVCRDAVTRRSLGYAYVNYNSTPDGEKALE 118
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDER 321
N + G+ + +Q R L++ QG N+++KNLD +ID++
Sbjct: 119 ELNYTLIKGRPCRIMWSQ----RDPALRKTG-----------QG-NVFIKNLDVAIDNKA 162
Query: 322 LRKEFTPFGTITSAK 336
L F FG I S K
Sbjct: 163 LHDTFAAFGNILSCK 177
>gi|255940906|ref|XP_002561222.1| Pc16g09030 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211585845|emb|CAP93573.1| Pc16g09030 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 734
Score = 335 bits (858), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 162/262 (61%), Positives = 204/262 (77%), Gaps = 1/262 (0%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D ERAL+ +N+ +KG+P RIMWSQRDP+LRK+G GNVFIKNLD +IDNKA++DTF+AFG
Sbjct: 98 DGERALEDLNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDNAIDNKALHDTFAAFG 157
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCKVAQDE NSKGYGFVH+ET EAAN +I+ VNGMLLN K VFVG I +K+R+ +
Sbjct: 158 NILSCKVAQDEFANSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISKKDRQSK 217
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGKSRGFGFVAYESPE 254
E FTN+YIKN + D++ + MFE +G ITS + ++ DGKSRGFGFV Y + E
Sbjct: 218 FEEMKANFTNIYIKNIDLEITDDEFRTMFEAFGEITSATLSHDQDGKSRGFGFVNYANHE 277
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
AE AV N KEV + LYVGRAQKK ER +EL++++E ++E+ ++YQGVNLYVKNL
Sbjct: 278 SAEAAVAEMNEKEVKSQKLYVGRAQKKHEREEELRKQYEAARMEKASKYQGVNLYVKNLT 337
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
D IDDE+LR FTP+GTITSAK
Sbjct: 338 DDIDDEKLRDLFTPYGTITSAK 359
Score = 97.8 bits (242), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 116/226 (51%), Gaps = 18/226 (7%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSIEK 170
++++ LD S+ +Y+ FS+ G + S +V +D S GY +V++ +++E
Sbjct: 46 SLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALED 105
Query: 171 VNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTI 230
+N L+ K + + R ++ G+ NV+IKN +++ L + F +G I
Sbjct: 106 LNYTLIKGKPCRI-MWSQRDPALRKTGQ-----GNVFIKNLDNAIDNKALHDTFAAFGNI 159
Query: 231 TSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELK 289
S +V ++ S+G+GFV YE+ E A A++ NG ++ K ++VG K +R +
Sbjct: 160 LSCKVAQDEFANSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISKKDR----Q 215
Query: 290 RRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSA 335
+FE +K N+Y+KN+D I D+ R F FG ITSA
Sbjct: 216 SKFEEMKANF------TNIYIKNIDLEITDDEFRTMFEAFGEITSA 255
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 34/50 (68%)
Query: 240 GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELK 289
GKS+GFGFV + SP+ A KAV N + V+GK LYV AQ+K R +L+
Sbjct: 424 GKSKGFGFVCFSSPDEASKAVTEMNQRMVNGKPLYVALAQRKDVRRSQLE 473
>gi|307103841|gb|EFN52098.1| hypothetical protein CHLNCDRAFT_59028 [Chlorella variabilis]
Length = 634
Score = 335 bits (858), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 164/261 (62%), Positives = 203/261 (77%), Gaps = 4/261 (1%)
Query: 77 TERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGS 136
ERALD +N+ L GRP+RIMWS RDP+ RKSGVGN+FIKNLD+S+DNKA++DTFSAFG+
Sbjct: 95 AERALDQLNYTPLVGRPMRIMWSHRDPAFRKSGVGNIFIKNLDRSVDNKALHDTFSAFGN 154
Query: 137 ILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKEL 196
ILSCKVAQD +G SKGYGFVHFE +E+A +IEKVNGMLL K V+VG F+ R ER +
Sbjct: 155 ILSCKVAQDLKGESKGYGFVHFEKDESARLAIEKVNGMLLEGKKVYVGPFLRRSERSSDS 214
Query: 197 GEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEF 255
K FTNV++KN E +D+++K MF +GT+ S +M +D GKS+GFGF+ +E PE
Sbjct: 215 EVK---FTNVFVKNLDEAVSDDEVKAMFAEHGTVNSCIIMRDDEGKSKGFGFINFEEPEQ 271
Query: 256 AEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDD 315
A AVQA NGK+V+ K LYVGRAQKKAER L+ +FE L+ ER+ +YQG+NLYVKNL D
Sbjct: 272 AASAVQALNGKDVNCKELYVGRAQKKAEREAMLRAKFEELRSERIAKYQGMNLYVKNLHD 331
Query: 316 SIDDERLRKEFTPFGTITSAK 336
IDDE LR EF+ FGTITSAK
Sbjct: 332 DIDDETLRTEFSQFGTITSAK 352
Score = 147 bits (371), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 75/193 (38%), Positives = 122/193 (63%), Gaps = 11/193 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NVF+KNLD+++ + + F+ G++ SC + +D++G SKG+GF++FE E A +++ +
Sbjct: 220 NVFVKNLDEAVSDDEVKAMFAEHGTVNSCIIMRDDEGKSKGFGFINFEEPEQAASAVQAL 279
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKLK 221
NG +N K ++VG+ + ERE L K + N+Y+KN +D +DE L+
Sbjct: 280 NGKDVNCKELYVGRAQKKAEREAMLRAKFEELRSERIAKYQGMNLYVKNLHDDIDDETLR 339
Query: 222 EMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
F +GTITS +VM ++ GKSRGFGFV Y SPE A +AV NG+ + GK +YV AQ+
Sbjct: 340 TEFSQFGTITSAKVMVDSAGKSRGFGFVCYASPEEATRAVTEMNGRMIKGKPIYVALAQR 399
Query: 281 KAERTQELKRRFE 293
+ R +L+++++
Sbjct: 400 RDVRRAQLEQQYQ 412
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 66/139 (47%), Gaps = 23/139 (16%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYES---PEFAEK 258
+++Y+ + D + +L E+F G + S RV + +S G+ +V Y S P AE+
Sbjct: 38 SSLYVGDLDRDVTEAQLFEVFSQIGPVASIRVCRDAVTRRSLGYAYVNYNSVLDPAAAER 97
Query: 259 AVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGV-NLYVKNLDDSI 317
A+ N + G+ + + + + + R GV N+++KNLD S+
Sbjct: 98 ALDQLNYTPLVGRPMRIMWSHR-----------------DPAFRKSGVGNIFIKNLDRSV 140
Query: 318 DDERLRKEFTPFGTITSAK 336
D++ L F+ FG I S K
Sbjct: 141 DNKALHDTFSAFGNILSCK 159
>gi|448115215|ref|XP_004202770.1| Piso0_001626 [Millerozyma farinosa CBS 7064]
gi|359383638|emb|CCE79554.1| Piso0_001626 [Millerozyma farinosa CBS 7064]
Length = 626
Score = 335 bits (858), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 159/262 (60%), Positives = 208/262 (79%), Gaps = 1/262 (0%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D E+A+D +N+ + GRP RIMWSQRDPSLR++G GN+FIKNL +IDNKA++DTFSAFG
Sbjct: 103 DGEKAIDDLNYSLIDGRPCRIMWSQRDPSLRRNGEGNIFIKNLHPAIDNKALHDTFSAFG 162
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
ILSCKVA DEQGNSK +GFVH+ET EAA +IE VNGMLLN + V+VGK + +K+RE +
Sbjct: 163 KILSCKVATDEQGNSKCFGFVHYETAEAARAAIENVNGMLLNDREVYVGKHVSKKDRESK 222
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGKSRGFGFVAYESPE 254
E FTNVY+KN F++E+++ +FEPYG ITS + + +GKS+GFGFV +ES E
Sbjct: 223 FEEMKANFTNVYVKNIDLGFSEEEMRNLFEPYGKITSLHLEKDAEGKSKGFGFVNFESHE 282
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A KAV+ N K+++G+ LYVGRAQKK ER +ELKR++E ++E+L++YQGVNL+VKNLD
Sbjct: 283 AAVKAVEELNDKDINGQNLYVGRAQKKRERIEELKRQYETARLEKLSKYQGVNLFVKNLD 342
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
DSID +L +EF PFGTITSA+
Sbjct: 343 DSIDSVKLEEEFKPFGTITSAR 364
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 78/198 (39%), Positives = 123/198 (62%), Gaps = 11/198 (5%)
Query: 107 KSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANK 166
K+ NV++KN+D + M + F +G I S + +D +G SKG+GFV+FE+ EAA K
Sbjct: 227 KANFTNVYVKNIDLGFSEEEMRNLFEPYGKITSLHLEKDAEGKSKGFGFVNFESHEAAVK 286
Query: 167 SIEKVNGMLLNSKIVFVGKFIPRKEREKELG---EKAKL-------FTNVYIKNFGEDFN 216
++E++N +N + ++VG+ ++ER +EL E A+L N+++KN + +
Sbjct: 287 AVEELNDKDINGQNLYVGRAQKKRERIEELKRQYETARLEKLSKYQGVNLFVKNLDDSID 346
Query: 217 DEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYV 275
KL+E F+P+GTITS RVM + GKS+GFGFV + SPE A KA+ N + GK LYV
Sbjct: 347 SVKLEEEFKPFGTITSARVMVDEHGKSKGFGFVCFSSPEEATKAITEMNQRMFHGKPLYV 406
Query: 276 GRAQKKAERTQELKRRFE 293
AQ+K R +L+++ +
Sbjct: 407 ALAQRKDVRRSQLEQQIQ 424
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 119/226 (52%), Gaps = 18/226 (7%)
Query: 111 GNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSIE 169
++++ L+ S++ ++++ FS G + S +V +D S GY +V+F E K+I+
Sbjct: 50 ASLYVGELNPSVNEASLFEIFSPVGQVSSIRVCRDAVTKKSLGYAYVNFHKLEDGEKAID 109
Query: 170 KVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGT 229
+N L++ + + + R + GE N++IKN +++ L + F +G
Sbjct: 110 DLNYSLIDGRPCRI-MWSQRDPSLRRNGE-----GNIFIKNLHPAIDNKALHDTFSAFGK 163
Query: 230 ITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S +V ++ G S+ FGFV YE+ E A A++ NG ++ + +YVG+ K +R
Sbjct: 164 ILSCKVATDEQGNSKCFGFVHYETAEAARAAIENVNGMLLNDREVYVGKHVSKKDR---- 219
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITS 334
+ +FE +K N+YVKN+D +E +R F P+G ITS
Sbjct: 220 ESKFEEMKANF------TNVYVKNIDLGFSEEEMRNLFEPYGKITS 259
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 63/135 (46%), Gaps = 18/135 (13%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQ 261
++Y+ N+ L E+F P G ++S RV + KS G+ +V + E EKA+
Sbjct: 50 ASLYVGELNPSVNEASLFEIFSPVGQVSSIRVCRDAVTKKSLGYAYVNFHKLEDGEKAID 109
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDER 321
N +DG+ + +Q R L+R E N+++KNL +ID++
Sbjct: 110 DLNYSLIDGRPCRIMWSQ----RDPSLRRNGEG------------NIFIKNLHPAIDNKA 153
Query: 322 LRKEFTPFGTITSAK 336
L F+ FG I S K
Sbjct: 154 LHDTFSAFGKILSCK 168
>gi|346323639|gb|EGX93237.1| polyadenylate-binding protein [Cordyceps militaris CM01]
Length = 736
Score = 334 bits (857), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 157/262 (59%), Positives = 204/262 (77%), Gaps = 1/262 (0%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D E+AL+ +N+ +KGRP RIMWSQRDP+LRK+G GNVFIKNLD +IDNKA++DTF+AFG
Sbjct: 108 DGEKALEELNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDVAIDNKALHDTFAAFG 167
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCKVAQDE G+SKGYGFVH+ET+EAA ++I+ VNGMLLN K V+VG IP+K+R+ +
Sbjct: 168 NILSCKVAQDETGSSKGYGFVHYETDEAAQQAIKHVNGMLLNEKKVYVGHHIPKKDRQSK 227
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGKSRGFGFVAYESPE 254
E FTNVYIKN D D++ + +FE +G +TS + + DGKSRGFGFV + + E
Sbjct: 228 FEEMKANFTNVYIKNIAPDVTDDQFRVLFEAHGDVTSSSIARDPDGKSRGFGFVNFTTHE 287
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A AV+ N K+ G+ LYVGRAQKK ER +EL++ +E +IE+ ++YQGVNLY+KNLD
Sbjct: 288 AASAAVEELNNKDFHGQELYVGRAQKKHEREEELRKSYEAARIEKASKYQGVNLYIKNLD 347
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
D +DDE+LR FT FG ITSAK
Sbjct: 348 DDVDDEKLRTMFTEFGPITSAK 369
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/245 (31%), Positives = 118/245 (48%), Gaps = 62/245 (25%)
Query: 107 KSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANK 166
K+ NV+IKN+ + + F A G + S +A+D G S+G+GFV+F T EAA+
Sbjct: 232 KANFTNVYIKNIAPDVTDDQFRVLFEAHGDVTSSSIARDPDGKSRGFGFVNFTTHEAASA 291
Query: 167 SIEKVNGMLLNSKIVFVGKFIPRKEREKELG--------EKAKLF--TNVYIKNFGEDFN 216
++E++N + + ++VG+ + ERE+EL EKA + N+YIKN +D +
Sbjct: 292 AVEELNNKDFHGQELYVGRAQKKHEREEELRKSYEAARIEKASKYQGVNLYIKNLDDDVD 351
Query: 217 DEKLKEMFEPYGTITSYRVM---------------------------------------- 236
DEKL+ MF +G ITS +VM
Sbjct: 352 DEKLRTMFTEFGPITSAKVMRDSPSDDEDEEGKEAEAEDKDKENKKADAEAEAAEAAEEE 411
Query: 237 NNDGKSR------------GFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAER 284
N+D + + GFGFV + +P+ A KAV N + ++GK LYV AQ+K R
Sbjct: 412 NSDKEKKERKGSKKLGKSKGFGFVCFSNPDDATKAVAEMNQRMINGKPLYVALAQRKDVR 471
Query: 285 TQELK 289
+L+
Sbjct: 472 KSQLE 476
Score = 45.4 bits (106), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 61/135 (45%), Gaps = 18/135 (13%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQ 261
++Y+ + L E+F G + S RV + +S G+ +V Y S EKA++
Sbjct: 55 ASLYVGELDPSVTEAMLFELFSQIGAVASIRVCRDAVTRRSLGYAYVNYNSTPDGEKALE 114
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDER 321
N + G+ + +Q R L++ QG N+++KNLD +ID++
Sbjct: 115 ELNYTLIKGRPCRIMWSQ----RDPALRK-----------TGQG-NVFIKNLDVAIDNKA 158
Query: 322 LRKEFTPFGTITSAK 336
L F FG I S K
Sbjct: 159 LHDTFAAFGNILSCK 173
>gi|242802487|ref|XP_002483981.1| polyadenylate-binding protein [Talaromyces stipitatus ATCC 10500]
gi|218717326|gb|EED16747.1| polyadenylate-binding protein [Talaromyces stipitatus ATCC 10500]
Length = 751
Score = 334 bits (856), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 160/262 (61%), Positives = 203/262 (77%), Gaps = 1/262 (0%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D ERAL+ +N+ +KGRP RIMWSQRDP+LRK+G GNVFIKNLD +IDNKA++DTF+AFG
Sbjct: 103 DGERALEDLNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDTAIDNKALHDTFAAFG 162
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCKVAQDE GNSKGYGFVH+ET EAAN +I+ VNGMLLN K VFVG I +K+R+ +
Sbjct: 163 NILSCKVAQDEFGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISKKDRQSK 222
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPE 254
E FTNVY+KN + DE+ +E+F YG ITS + +D GKSRGFGFV Y +
Sbjct: 223 FEEMKANFTNVYVKNIDPEVTDEEFRELFGKYGDITSATISRDDSGKSRGFGFVNYVDHQ 282
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A+ AV N K+ + LYVGRAQKK ER +EL+R++E ++E+ ++YQGVNLYVKNL
Sbjct: 283 NAQSAVDELNDKDFHSQKLYVGRAQKKHEREEELRRQYEAARLEKASKYQGVNLYVKNLT 342
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
D +DD++LR+ F+PFGTITSAK
Sbjct: 343 DDVDDDKLRELFSPFGTITSAK 364
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 74/246 (30%), Positives = 124/246 (50%), Gaps = 59/246 (23%)
Query: 107 KSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANK 166
K+ NV++KN+D + ++ + F +G I S +++D+ G S+G+GFV++ + A
Sbjct: 227 KANFTNVYVKNIDPEVTDEEFRELFGKYGDITSATISRDDSGKSRGFGFVNYVDHQNAQS 286
Query: 167 SIEKVNGMLLNSKIVFVGKFIPRKEREKELG--------EKAKLF--TNVYIKNFGEDFN 216
+++++N +S+ ++VG+ + ERE+EL EKA + N+Y+KN +D +
Sbjct: 287 AVDELNDKDFHSQKLYVGRAQKKHEREEELRRQYEAARLEKASKYQGVNLYVKNLTDDVD 346
Query: 217 DEKLKEMFEPYGTITSYRVMNND------------------------------------- 239
D+KL+E+F P+GTITS +VM +
Sbjct: 347 DDKLRELFSPFGTITSAKVMRDTVGVSSDSDKEEGKEASEKEGEEASEKEETKVKAEDEE 406
Query: 240 ------------GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQE 287
GKS+GFGFV + SP+ A KAV N + V+GK LYV AQ+K R +
Sbjct: 407 KTETKKPEKKVFGKSKGFGFVCFSSPDEASKAVTEMNQRMVNGKPLYVALAQRKDVRKSQ 466
Query: 288 LKRRFE 293
L+ +
Sbjct: 467 LEASIQ 472
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 61/135 (45%), Gaps = 18/135 (13%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQ 261
++Y+ + L E+F G + S RV + +S G+ +V Y + E+A++
Sbjct: 50 ASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALE 109
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDER 321
N + G+ + +Q R L++ QG N+++KNLD +ID++
Sbjct: 110 DLNYTLIKGRPCRIMWSQ----RDPALRKTG-----------QG-NVFIKNLDTAIDNKA 153
Query: 322 LRKEFTPFGTITSAK 336
L F FG I S K
Sbjct: 154 LHDTFAAFGNILSCK 168
>gi|448112633|ref|XP_004202146.1| Piso0_001626 [Millerozyma farinosa CBS 7064]
gi|359465135|emb|CCE88840.1| Piso0_001626 [Millerozyma farinosa CBS 7064]
Length = 625
Score = 333 bits (855), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 158/262 (60%), Positives = 209/262 (79%), Gaps = 1/262 (0%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D E+A++ +N+ + GRP RIMWSQRDPSLR++G GN+FIKNL +IDNKA++DTFSAFG
Sbjct: 103 DGEKAIEELNYSLIDGRPCRIMWSQRDPSLRRNGEGNIFIKNLHPAIDNKALHDTFSAFG 162
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
ILSCKVA DEQGNSK +GFVH+ET EAA +IE VNGMLLN + V+VGK + +K+RE +
Sbjct: 163 KILSCKVATDEQGNSKCFGFVHYETAEAAKAAIENVNGMLLNDREVYVGKHVSKKDRESK 222
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGKSRGFGFVAYESPE 254
E FTNVY+KN F++E+++++FEPYG ITS + + +GKS+GFGFV +ES E
Sbjct: 223 FEEMKANFTNVYVKNIDLGFSEEEMRKLFEPYGKITSLHLEKDAEGKSKGFGFVNFESHE 282
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A KAV+ N K+++G+ LYVGRAQKK ER +ELKR++E ++E+L++YQGVNL+VKNLD
Sbjct: 283 AAVKAVEELNDKDINGQKLYVGRAQKKRERIEELKRQYEAARLEKLSKYQGVNLFVKNLD 342
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
DSID +L +EF PFGTITSA+
Sbjct: 343 DSIDSVKLEEEFKPFGTITSAR 364
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 78/198 (39%), Positives = 122/198 (61%), Gaps = 11/198 (5%)
Query: 107 KSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANK 166
K+ NV++KN+D + M F +G I S + +D +G SKG+GFV+FE+ EAA K
Sbjct: 227 KANFTNVYVKNIDLGFSEEEMRKLFEPYGKITSLHLEKDAEGKSKGFGFVNFESHEAAVK 286
Query: 167 SIEKVNGMLLNSKIVFVGKFIPRKEREKELG---EKAKL-------FTNVYIKNFGEDFN 216
++E++N +N + ++VG+ ++ER +EL E A+L N+++KN + +
Sbjct: 287 AVEELNDKDINGQKLYVGRAQKKRERIEELKRQYEAARLEKLSKYQGVNLFVKNLDDSID 346
Query: 217 DEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYV 275
KL+E F+P+GTITS RVM + GKS+GFGFV + SPE A KA+ N + GK LYV
Sbjct: 347 SVKLEEEFKPFGTITSARVMVDEHGKSKGFGFVCFSSPEEATKAITEMNQRMFHGKPLYV 406
Query: 276 GRAQKKAERTQELKRRFE 293
AQ+K R +L+++ +
Sbjct: 407 ALAQRKDVRRSQLEQQIQ 424
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 121/226 (53%), Gaps = 18/226 (7%)
Query: 111 GNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSIE 169
++++ L+ S++ +++ FS G + S +V +D S GY +V+F E K+IE
Sbjct: 50 ASLYVGELNPSVNEALLFEIFSPVGQVSSIRVCRDAVTKKSLGYAYVNFHKLEDGEKAIE 109
Query: 170 KVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGT 229
++N L++ + + + R + GE N++IKN +++ L + F +G
Sbjct: 110 ELNYSLIDGRPCRI-MWSQRDPSLRRNGE-----GNIFIKNLHPAIDNKALHDTFSAFGK 163
Query: 230 ITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S +V ++ G S+ FGFV YE+ E A+ A++ NG ++ + +YVG+ K +R
Sbjct: 164 ILSCKVATDEQGNSKCFGFVHYETAEAAKAAIENVNGMLLNDREVYVGKHVSKKDR---- 219
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITS 334
+ +FE +K N+YVKN+D +E +RK F P+G ITS
Sbjct: 220 ESKFEEMKANF------TNVYVKNIDLGFSEEEMRKLFEPYGKITS 259
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 64/135 (47%), Gaps = 18/135 (13%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQ 261
++Y+ N+ L E+F P G ++S RV + KS G+ +V + E EKA++
Sbjct: 50 ASLYVGELNPSVNEALLFEIFSPVGQVSSIRVCRDAVTKKSLGYAYVNFHKLEDGEKAIE 109
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDER 321
N +DG+ + +Q R L+R E N+++KNL +ID++
Sbjct: 110 ELNYSLIDGRPCRIMWSQ----RDPSLRRNGEG------------NIFIKNLHPAIDNKA 153
Query: 322 LRKEFTPFGTITSAK 336
L F+ FG I S K
Sbjct: 154 LHDTFSAFGKILSCK 168
>gi|358372137|dbj|GAA88742.1| polyadenylate-binding protein [Aspergillus kawachii IFO 4308]
Length = 763
Score = 333 bits (855), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 159/262 (60%), Positives = 207/262 (79%), Gaps = 1/262 (0%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D ERAL+ +N+ +KG+P RIMWSQRDP+LRK+G GNVFIKNLD +IDNKA++DTF+AFG
Sbjct: 105 DGERALEDLNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDSAIDNKALHDTFAAFG 164
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCKVAQDE GNSKGYGFVH+ET EAAN +I+ VNGMLLN K VFVG I +K+R+ +
Sbjct: 165 NILSCKVAQDEFGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISKKDRQSK 224
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPE 254
E FTNVYIKN + +D++ ++MFE +G ITS + + +GKSRGFGFV + + E
Sbjct: 225 FEEMKANFTNVYIKNLDSEIDDDEFRKMFEKFGEITSATLSRDQEGKSRGFGFVNFSTHE 284
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A+ AV+ N KE+ + LYVGRAQKK ER +EL++++E ++E+ ++YQGVNLYVKNL
Sbjct: 285 SAQAAVEEMNDKEIRSQKLYVGRAQKKHEREEELRKQYEAARLEKASKYQGVNLYVKNLT 344
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
D IDDE+LR+ F P+GTITSAK
Sbjct: 345 DDIDDEKLRELFGPYGTITSAK 366
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/226 (30%), Positives = 119/226 (52%), Gaps = 18/226 (7%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSIEK 170
++++ LD S+ +Y+ FS+ G + S +V +D S GY +V++ +++E
Sbjct: 53 SLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALED 112
Query: 171 VNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTI 230
+N L+ K + + R ++ G+ NV+IKN +++ L + F +G I
Sbjct: 113 LNYTLIKGKPCRI-MWSQRDPALRKTGQ-----GNVFIKNLDSAIDNKALHDTFAAFGNI 166
Query: 231 TSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELK 289
S +V ++ G S+G+GFV YE+ E A A++ NG ++ K ++VG K +R +
Sbjct: 167 LSCKVAQDEFGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISKKDR----Q 222
Query: 290 RRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSA 335
+FE +K N+Y+KNLD IDD+ RK F FG ITSA
Sbjct: 223 SKFEEMKANF------TNVYIKNLDSEIDDDEFRKMFEKFGEITSA 262
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 34/50 (68%)
Query: 240 GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELK 289
GKS+GFGFV + SP+ A KAV N + V+GK LYV AQ+K R +L+
Sbjct: 431 GKSKGFGFVCFSSPDEASKAVTEMNQRMVNGKPLYVALAQRKDVRRSQLE 480
>gi|169771151|ref|XP_001820045.1| polyadenylate-binding protein, cytoplasmic and nuclear [Aspergillus
oryzae RIB40]
gi|317144326|ref|XP_003189588.1| polyadenylate-binding protein, cytoplasmic and nuclear [Aspergillus
oryzae RIB40]
gi|121923334|sp|Q2UK72.1|PABP_ASPOR RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|83767904|dbj|BAE58043.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|391872693|gb|EIT81794.1| polyadenylate-binding protein [Aspergillus oryzae 3.042]
Length = 765
Score = 333 bits (855), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 159/262 (60%), Positives = 206/262 (78%), Gaps = 1/262 (0%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D ERAL+ +N+ +KG+P RIMWSQRDP+LRK+G GNVFIKNLD +IDNKA++DTF+AFG
Sbjct: 102 DGERALEDLNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDSAIDNKALHDTFAAFG 161
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCKVAQDE GNSKGYGFVH+ET EAAN +I+ VNGMLLN K VFVG I +K+R+ +
Sbjct: 162 NILSCKVAQDEFGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISKKDRQSK 221
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPE 254
E FTNVYIKN +D +E+ +E+FE +G ITS + + +GKSRGFGFV + + E
Sbjct: 222 FEEMKANFTNVYIKNIDQDVTEEEFRELFEKFGEITSATLSRDQEGKSRGFGFVNFSTHE 281
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A+ AV N KE+ + LYVGRAQKK ER +EL++++E ++E+ ++YQGVNLYVKNL
Sbjct: 282 SAQAAVDEMNEKEIRTQKLYVGRAQKKHEREEELRKQYEAARLEKASKYQGVNLYVKNLT 341
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
D +DDE+LR+ F P+GTITSAK
Sbjct: 342 DDVDDEKLRELFGPYGTITSAK 363
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 124/244 (50%), Gaps = 18/244 (7%)
Query: 94 IRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKG 152
+ + S P+ + ++++ LD S+ +Y+ FS+ G + S +V +D S G
Sbjct: 32 VTAVESTTAPNASQPHSASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLG 91
Query: 153 YGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFG 212
Y +V++ +++E +N L+ K + + R ++ G+ NV+IKN
Sbjct: 92 YAYVNYNNTADGERALEDLNYTLIKGKPCRI-MWSQRDPALRKTGQ-----GNVFIKNLD 145
Query: 213 EDFNDEKLKEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGK 271
+++ L + F +G I S +V ++ G S+G+GFV YE+ E A A++ NG ++ K
Sbjct: 146 SAIDNKALHDTFAAFGNILSCKVAQDEFGNSKGYGFVHYETAEAANNAIKHVNGMLLNDK 205
Query: 272 ILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGT 331
++VG K +R + +FE +K N+Y+KN+D + +E R+ F FG
Sbjct: 206 KVFVGHHISKKDR----QSKFEEMKANF------TNVYIKNIDQDVTEEEFRELFEKFGE 255
Query: 332 ITSA 335
ITSA
Sbjct: 256 ITSA 259
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 34/50 (68%)
Query: 240 GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELK 289
GKS+GFGFV + SP+ A KAV N + V+GK LYV AQ+K R +L+
Sbjct: 430 GKSKGFGFVCFSSPDEASKAVTEMNQRMVNGKPLYVALAQRKDVRRSQLE 479
>gi|425772940|gb|EKV11320.1| Polyadenylate-binding protein [Penicillium digitatum PHI26]
gi|425781989|gb|EKV19920.1| Polyadenylate-binding protein [Penicillium digitatum Pd1]
Length = 736
Score = 333 bits (855), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 162/262 (61%), Positives = 204/262 (77%), Gaps = 1/262 (0%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D ERAL+ +N+ +KG+P RIMWSQRDP+LRK+G GNVFIKNLD +IDNKA++DTF+AFG
Sbjct: 98 DGERALEDLNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDNAIDNKALHDTFAAFG 157
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCKVAQDE NSKGYGFVH+ET EAAN +I+ VNGMLLN K VFVG I +K+R+ +
Sbjct: 158 NILSCKVAQDEFANSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISKKDRQSK 217
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGKSRGFGFVAYESPE 254
E FTN+YIKN + D++ + MFE +G ITS + ++ DGKSRGFGFV Y + E
Sbjct: 218 FEEMKANFTNIYIKNIDLEITDDEFRVMFEAFGEITSATLSHDQDGKSRGFGFVNYANHE 277
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
AE AV N KEV + LYVGRAQKK ER +EL++++E ++E+ ++YQGVNLYVKNL
Sbjct: 278 SAEAAVAEMNEKEVKTQKLYVGRAQKKHEREEELRKQYEAARMEKASKYQGVNLYVKNLT 337
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
D IDDE+LR FTP+GTITSAK
Sbjct: 338 DDIDDEKLRDLFTPYGTITSAK 359
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 52/140 (37%), Positives = 86/140 (61%), Gaps = 10/140 (7%)
Query: 107 KSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANK 166
K+ N++IKN+D I + F AFG I S ++ D+ G S+G+GFV++ E+A
Sbjct: 222 KANFTNIYIKNIDLEITDDEFRVMFEAFGEITSATLSHDQDGKSRGFGFVNYANHESAEA 281
Query: 167 SIEKVNGMLLNSKIVFVGKFIPRKEREKELG--------EKAKLF--TNVYIKNFGEDFN 216
++ ++N + ++ ++VG+ + ERE+EL EKA + N+Y+KN +D +
Sbjct: 282 AVAEMNEKEVKTQKLYVGRAQKKHEREEELRKQYEAARMEKASKYQGVNLYVKNLTDDID 341
Query: 217 DEKLKEMFEPYGTITSYRVM 236
DEKL+++F PYGTITS +VM
Sbjct: 342 DEKLRDLFTPYGTITSAKVM 361
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 116/226 (51%), Gaps = 18/226 (7%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSIEK 170
++++ LD S+ +Y+ FS+ G + S +V +D S GY +V++ +++E
Sbjct: 46 SLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALED 105
Query: 171 VNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTI 230
+N L+ K I +R+ L + + NV+IKN +++ L + F +G I
Sbjct: 106 LNYTLIKGKPC----RIMWSQRDPALRKTGQ--GNVFIKNLDNAIDNKALHDTFAAFGNI 159
Query: 231 TSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELK 289
S +V ++ S+G+GFV YE+ E A A++ NG ++ K ++VG K +R +
Sbjct: 160 LSCKVAQDEFANSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISKKDR----Q 215
Query: 290 RRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSA 335
+FE +K N+Y+KN+D I D+ R F FG ITSA
Sbjct: 216 SKFEEMKANF------TNIYIKNIDLEITDDEFRVMFEAFGEITSA 255
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 33/50 (66%)
Query: 240 GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELK 289
GKS+GFGFV + SP+ A KAV N + V+ K LYV AQ+K R +L+
Sbjct: 423 GKSKGFGFVCFSSPDEASKAVTEMNQRMVNAKPLYVALAQRKDVRRSQLE 472
>gi|317025248|ref|XP_001388739.2| polyadenylate-binding protein, cytoplasmic and nuclear [Aspergillus
niger CBS 513.88]
gi|350637942|gb|EHA26298.1| hypothetical protein ASPNIDRAFT_46760 [Aspergillus niger ATCC 1015]
Length = 764
Score = 333 bits (854), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 159/262 (60%), Positives = 207/262 (79%), Gaps = 1/262 (0%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D ERAL+ +N+ +KG+P RIMWSQRDP+LRK+G GNVFIKNLD +IDNKA++DTF+AFG
Sbjct: 107 DGERALEDLNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDSAIDNKALHDTFAAFG 166
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCKVAQDE GNSKGYGFVH+ET EAAN +I+ VNGMLLN K VFVG I +K+R+ +
Sbjct: 167 NILSCKVAQDEFGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISKKDRQSK 226
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPE 254
E FTNVYIKN + +D++ ++MFE +G ITS + + +GKSRGFGFV + + E
Sbjct: 227 FEEMKANFTNVYIKNLDSEIDDDEFRKMFEKFGEITSATLSRDQEGKSRGFGFVNFSTHE 286
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A+ AV+ N KE+ + LYVGRAQKK ER +EL++++E ++E+ ++YQGVNLYVKNL
Sbjct: 287 SAQAAVEEMNDKEIRSQKLYVGRAQKKHEREEELRKQYEAARLEKASKYQGVNLYVKNLT 346
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
D IDDE+LR+ F P+GTITSAK
Sbjct: 347 DDIDDEKLRELFGPYGTITSAK 368
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 71/235 (30%), Positives = 122/235 (51%), Gaps = 18/235 (7%)
Query: 103 PSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETE 161
P+ + ++++ LD S+ +Y+ FS+ G + S +V +D S GY +V++
Sbjct: 46 PAANQPHSASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNT 105
Query: 162 EAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLK 221
+++E +N L+ K + + R ++ G+ NV+IKN +++ L
Sbjct: 106 ADGERALEDLNYTLIKGKPCRI-MWSQRDPALRKTGQ-----GNVFIKNLDSAIDNKALH 159
Query: 222 EMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
+ F +G I S +V ++ G S+G+GFV YE+ E A A++ NG ++ K ++VG
Sbjct: 160 DTFAAFGNILSCKVAQDEFGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHIS 219
Query: 281 KAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSA 335
K +R + +FE +K N+Y+KNLD IDD+ RK F FG ITSA
Sbjct: 220 KKDR----QSKFEEMKANF------TNVYIKNLDSEIDDDEFRKMFEKFGEITSA 264
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 34/50 (68%)
Query: 240 GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELK 289
GKS+GFGFV + SP+ A KAV N + V+GK LYV AQ+K R +L+
Sbjct: 432 GKSKGFGFVCFSSPDEASKAVTEMNQRMVNGKPLYVALAQRKDVRRSQLE 481
>gi|238486326|ref|XP_002374401.1| polyadenylate-binding protein [Aspergillus flavus NRRL3357]
gi|220699280|gb|EED55619.1| polyadenylate-binding protein [Aspergillus flavus NRRL3357]
Length = 713
Score = 333 bits (854), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 159/262 (60%), Positives = 206/262 (78%), Gaps = 1/262 (0%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D ERAL+ +N+ +KG+P RIMWSQRDP+LRK+G GNVFIKNLD +IDNKA++DTF+AFG
Sbjct: 102 DGERALEDLNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDSAIDNKALHDTFAAFG 161
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCKVAQDE GNSKGYGFVH+ET EAAN +I+ VNGMLLN K VFVG I +K+R+ +
Sbjct: 162 NILSCKVAQDEFGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISKKDRQSK 221
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPE 254
E FTNVYIKN +D +E+ +E+FE +G ITS + + +GKSRGFGFV + + E
Sbjct: 222 FEEMKANFTNVYIKNIDQDVTEEEFRELFEKFGEITSATLSRDQEGKSRGFGFVNFSTHE 281
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A+ AV N KE+ + LYVGRAQKK ER +EL++++E ++E+ ++YQGVNLYVKNL
Sbjct: 282 SAQAAVDEMNEKEIRTQKLYVGRAQKKHEREEELRKQYEAARLEKASKYQGVNLYVKNLT 341
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
D +DDE+LR+ F P+GTITSAK
Sbjct: 342 DDVDDEKLRELFGPYGTITSAK 363
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 124/244 (50%), Gaps = 18/244 (7%)
Query: 94 IRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKG 152
+ + S P+ + ++++ LD S+ +Y+ FS+ G + S +V +D S G
Sbjct: 32 VTAVESTTAPNASQPHSASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLG 91
Query: 153 YGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFG 212
Y +V++ +++E +N L+ K I +R+ L + + NV+IKN
Sbjct: 92 YAYVNYNNTADGERALEDLNYTLIKGKPC----RIMWSQRDPALRKTGQ--GNVFIKNLD 145
Query: 213 EDFNDEKLKEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGK 271
+++ L + F +G I S +V ++ G S+G+GFV YE+ E A A++ NG ++ K
Sbjct: 146 SAIDNKALHDTFAAFGNILSCKVAQDEFGNSKGYGFVHYETAEAANNAIKHVNGMLLNDK 205
Query: 272 ILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGT 331
++VG K +R + +FE +K N+Y+KN+D + +E R+ F FG
Sbjct: 206 KVFVGHHISKKDR----QSKFEEMKANF------TNVYIKNIDQDVTEEEFRELFEKFGE 255
Query: 332 ITSA 335
ITSA
Sbjct: 256 ITSA 259
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 34/50 (68%)
Query: 240 GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELK 289
GKS+GFGFV + SP+ A KAV N + V+GK LYV AQ+K R +L+
Sbjct: 430 GKSKGFGFVCFSSPDEASKAVTEMNQRMVNGKPLYVALAQRKDVRRSQLE 479
>gi|156064711|ref|XP_001598277.1| hypothetical protein SS1G_00363 [Sclerotinia sclerotiorum 1980]
gi|154691225|gb|EDN90963.1| hypothetical protein SS1G_00363 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 784
Score = 333 bits (854), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 158/264 (59%), Positives = 205/264 (77%), Gaps = 2/264 (0%)
Query: 75 LDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAF 134
+D E+AL+ +N+ +KGRP RIMWSQRDP+LRK+G GNVFIKNLD +IDNKA++DTF+AF
Sbjct: 113 VDGEKALEELNYTLIKGRPCRIMWSQRDPALRKNGQGNVFIKNLDVAIDNKALHDTFAAF 172
Query: 135 GSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREK 194
G+ILSCKVAQDE G SKGYGFVH+ET+EAA ++I+ VNGMLLN K VFVG IP+K+R+
Sbjct: 173 GNILSCKVAQDESGASKGYGFVHYETDEAAAQAIKHVNGMLLNEKKVFVGHHIPKKDRQS 232
Query: 195 ELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYES 252
+ E FTN+Y+KN + +E+ +E+FE +G +TS + + GKSRGFGFV + +
Sbjct: 233 KFEEMKANFTNIYVKNIPVEATEEEFRELFEKFGDVTSASLARDTESGKSRGFGFVNFIN 292
Query: 253 PEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKN 312
E A AV NGK+ G+ LYVGRAQKK ER +EL+R +E ++E+ ++YQGVNLYVKN
Sbjct: 293 HEHAATAVDELNGKDFKGQDLYVGRAQKKHEREEELRRSYEAARMEKASKYQGVNLYVKN 352
Query: 313 LDDSIDDERLRKEFTPFGTITSAK 336
LDD IDDE+LR+ F PFG ITSAK
Sbjct: 353 LDDEIDDEKLRELFAPFGAITSAK 376
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/235 (31%), Positives = 116/235 (49%), Gaps = 52/235 (22%)
Query: 107 KSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQD-EQGNSKGYGFVHFETEEAAN 165
K+ N+++KN+ + + F FG + S +A+D E G S+G+GFV+F E A
Sbjct: 238 KANFTNIYVKNIPVEATEEEFRELFEKFGDVTSASLARDTESGKSRGFGFVNFINHEHAA 297
Query: 166 KSIEKVNGMLLNSKIVFVGKFIPRKEREKELG--------EKAKLF--TNVYIKNFGEDF 215
+++++NG + ++VG+ + ERE+EL EKA + N+Y+KN ++
Sbjct: 298 TAVDELNGKDFKGQDLYVGRAQKKHEREEELRRSYEAARMEKASKYQGVNLYVKNLDDEI 357
Query: 216 NDEKLKEMFEPYGTITSYRVMNND------------------------------------ 239
+DEKL+E+F P+G ITS +VM +
Sbjct: 358 DDEKLRELFAPFGAITSAKVMRDTPAETADAEDKKEKDEEKNKENKKEGEAETEEASAPK 417
Query: 240 -----GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELK 289
GKS+GFGFV + +P+ A KAV N + V K LYV AQ+K R +L+
Sbjct: 418 AKRPLGKSKGFGFVCFNNPDEATKAVSDMNQRMVSNKPLYVALAQRKDVRKSQLE 472
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 62/135 (45%), Gaps = 18/135 (13%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQ 261
++Y+ + L E+F G++ S RV + +S G+ +V Y + EKA++
Sbjct: 61 ASLYVGELDPSVTEAMLFELFSQIGSVASIRVCRDAITRRSLGYAYVNYNTTVDGEKALE 120
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDER 321
N + G+ + +Q R L++ QG N+++KNLD +ID++
Sbjct: 121 ELNYTLIKGRPCRIMWSQ----RDPALRK-----------NGQG-NVFIKNLDVAIDNKA 164
Query: 322 LRKEFTPFGTITSAK 336
L F FG I S K
Sbjct: 165 LHDTFAAFGNILSCK 179
>gi|444721742|gb|ELW62457.1| Polyadenylate-binding protein 4-like protein [Tupaia chinensis]
Length = 370
Score = 333 bits (854), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 162/274 (59%), Positives = 212/274 (77%), Gaps = 7/274 (2%)
Query: 69 LGQPY-----MLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSID 123
LG Y + D ++ALDTMNFD +KG+ IR+MWSQRD LRKSG+GNVFIKNLD+SID
Sbjct: 51 LGYAYVNFLQLADAQKALDTMNFDMIKGKSIRLMWSQRDACLRKSGIGNVFIKNLDRSID 110
Query: 124 NKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFV 183
NK +Y+ FSAFG ILS KV D+QG SKGY FVHF+ + AA+++IE++NG LL VFV
Sbjct: 111 NKTLYEHFSAFGKILSSKVMSDDQG-SKGYAFVHFQNQSAADRAIEEMNGKLLKDCKVFV 169
Query: 184 GKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGKS 242
G+F RK+RE EL KA FTNVYIKNFG+D +DE+L+E+F YG S +VM + GKS
Sbjct: 170 GRFKNRKDREAELRNKASEFTNVYIKNFGDDMDDERLREVFSKYGKTLSVKVMTDPSGKS 229
Query: 243 RGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNR 302
+GFGFV++++ E A+KAV+ NGK+++G++++VGRAQKK ER ELK+ FE K ER+ +
Sbjct: 230 KGFGFVSFDNHEAAQKAVEEMNGKDINGQLIFVGRAQKKVERQAELKQMFEQQKRERIRK 289
Query: 303 YQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
QGV LY+KNLDD+IDDE+LRKEF+ FG+I+ K
Sbjct: 290 CQGVKLYIKNLDDTIDDEKLRKEFSSFGSISRVK 323
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 77/220 (35%), Positives = 124/220 (56%), Gaps = 16/220 (7%)
Query: 77 TERALDTMNFDALKGRPIRI----MWSQRDPSLRK--SGVGNVFIKNLDKSIDNKAMYDT 130
+RA++ MN LK + + R+ LR S NV+IKN +D++ + +
Sbjct: 150 ADRAIEEMNGKLLKDCKVFVGRFKNRKDREAELRNKASEFTNVYIKNFGDDMDDERLREV 209
Query: 131 FSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRK 190
FS +G LS KV D G SKG+GFV F+ EAA K++E++NG +N +++FVG+ +
Sbjct: 210 FSKYGKTLSVKVMTDPSGKSKGFGFVSFDNHEAAQKAVEEMNGKDINGQLIFVGRAQKKV 269
Query: 191 EREKELGE----------KAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDG 240
ER+ EL + + +YIKN + +DEKL++ F +G+I+ +VM +G
Sbjct: 270 ERQAELKQMFEQQKRERIRKCQGVKLYIKNLDDTIDDEKLRKEFSSFGSISRVKVMQEEG 329
Query: 241 KSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
+S+GFG + + SPE A KA+ NG+ + K L + +QK
Sbjct: 330 QSKGFGLICFSSPEEATKAMTEMNGQILGSKPLNIALSQK 369
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 119/228 (52%), Gaps = 17/228 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQD-EQGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + ++ FS G +LS ++ +D S GY +V+F A K++
Sbjct: 9 MASLYVGDLSADVTEDLLFKKFSTVGPVLSIRICRDLVTRRSLGYAYVNFLQLADAQKAL 68
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N ++ GK I +++ + NV+IKN +++ L E F +G
Sbjct: 69 DTMNFDMIK------GKSIRLMWSQRDACLRKSGIGNVFIKNLDRSIDNKTLYEHFSAFG 122
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S +VM++D S+G+ FV +++ A++A++ NGK + ++VGR + + +R EL
Sbjct: 123 KILSSKVMSDDQGSKGYAFVHFQNQSAADRAIEEMNGKLLKDCKVFVGRFKNRKDREAEL 182
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ + + N+Y+KN D +DDERLR+ F+ +G S K
Sbjct: 183 RNKAS----------EFTNVYIKNFGDDMDDERLREVFSKYGKTLSVK 220
>gi|367040559|ref|XP_003650660.1| hypothetical protein THITE_2110364 [Thielavia terrestris NRRL 8126]
gi|346997921|gb|AEO64324.1| hypothetical protein THITE_2110364 [Thielavia terrestris NRRL 8126]
Length = 777
Score = 333 bits (853), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 156/262 (59%), Positives = 206/262 (78%), Gaps = 1/262 (0%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D E+AL+ +N+ +KGRP RIMWSQRDP+LRK+G GNVFIKNLD +IDNKA++DTF+AFG
Sbjct: 117 DGEKALEELNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDVAIDNKALHDTFAAFG 176
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCKVAQDE GNSKGYGFVH+ET+EAA ++I+ VNGMLLN K V+VG IP+K+R+ +
Sbjct: 177 NILSCKVAQDENGNSKGYGFVHYETDEAAAQAIKHVNGMLLNEKKVYVGYHIPKKDRQSK 236
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPE 254
E FTNVY+KN + +E+ +E+F YG +TS + +N+GKSRGFGFV + +
Sbjct: 237 FEEMKANFTNVYVKNINHEVTEEEFRELFAKYGEVTSSSLARDNEGKSRGFGFVNFTTHA 296
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A KAV+ NGKE G+ LYVGRAQKK ER +EL++ +E ++E+ N+YQGVNLY+KNL
Sbjct: 297 SAAKAVEELNGKEFRGQELYVGRAQKKHEREEELRKSYEAARLEKANKYQGVNLYIKNLA 356
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
D +DD++LR+ F+ FG ITSAK
Sbjct: 357 DDVDDDKLRQMFSEFGPITSAK 378
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 76/237 (32%), Positives = 122/237 (51%), Gaps = 54/237 (22%)
Query: 107 KSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANK 166
K+ NV++KN++ + + + F+ +G + S +A+D +G S+G+GFV+F T +A K
Sbjct: 241 KANFTNVYVKNINHEVTEEEFRELFAKYGEVTSSSLARDNEGKSRGFGFVNFTTHASAAK 300
Query: 167 SIEKVNGMLLNSKIVFVGKFIPRKEREKELG--------EKAKLF--TNVYIKNFGEDFN 216
++E++NG + ++VG+ + ERE+EL EKA + N+YIKN +D +
Sbjct: 301 AVEELNGKEFRGQELYVGRAQKKHEREEELRKSYEAARLEKANKYQGVNLYIKNLADDVD 360
Query: 217 DEKLKEMFEPYGTITSYRVMNND------------------------------------- 239
D+KL++MF +G ITS +VM +
Sbjct: 361 DDKLRQMFSEFGPITSAKVMRDAPPEPPAGSEGDKEGKDKENKKESEKEGEGEAAEKKTE 420
Query: 240 -------GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELK 289
GKS+GFGFV + +P+ A KAV N + VDGK LYV AQ+K R +L+
Sbjct: 421 KKVERKLGKSKGFGFVCFSNPDDATKAVAEMNQRMVDGKPLYVALAQRKDVRKSQLE 477
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 63/135 (46%), Gaps = 18/135 (13%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQ 261
++Y+ + L E+F G++ S RV + +S G+ +V Y S + EKA++
Sbjct: 64 ASLYVGELDPSVTEAMLFELFSQIGSVASIRVCRDAVTRRSLGYAYVNYNSTQDGEKALE 123
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDER 321
N + G+ + +Q R L++ QG N+++KNLD +ID++
Sbjct: 124 ELNYTLIKGRPCRIMWSQ----RDPALRKTG-----------QG-NVFIKNLDVAIDNKA 167
Query: 322 LRKEFTPFGTITSAK 336
L F FG I S K
Sbjct: 168 LHDTFAAFGNILSCK 182
>gi|171681916|ref|XP_001905901.1| hypothetical protein [Podospora anserina S mat+]
gi|170940917|emb|CAP66567.1| unnamed protein product [Podospora anserina S mat+]
Length = 804
Score = 333 bits (853), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 157/262 (59%), Positives = 204/262 (77%), Gaps = 1/262 (0%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D E+AL+ +N+ +KGRP RIMWSQRDP+LRK+G GNVFIKNLD +IDNKA++DTF+AFG
Sbjct: 167 DGEKALEDLNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDVAIDNKALHDTFAAFG 226
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCKVAQDE GNSKGYGFVH+ET+EAA +I+ VNGMLLN K V+VG IP+K+R+ +
Sbjct: 227 NILSCKVAQDENGNSKGYGFVHYETDEAAANAIKHVNGMLLNEKKVYVGYHIPKKDRQSK 286
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPE 254
E FTNVY+KN + DE+ +E+F YG +TS + +D GKSRGFGFV + + E
Sbjct: 287 FEEMKANFTNVYVKNIPAEVTDEEFRELFAKYGDVTSSSLARSDEGKSRGFGFVNFTTHE 346
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A KAV+ NGK+ G+ LYVGRAQKK ER +EL+R +E + E+ N+YQGVNLY+KNL
Sbjct: 347 AASKAVEELNGKDFRGQELYVGRAQKKHEREEELRRSYEAARQEKANKYQGVNLYIKNLG 406
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
D +DD++LR+ F+ +G ITSAK
Sbjct: 407 DDVDDDKLRQMFSEYGPITSAK 428
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 77/232 (33%), Positives = 124/232 (53%), Gaps = 49/232 (21%)
Query: 107 KSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANK 166
K+ NV++KN+ + ++ + F+ +G + S +A+ ++G S+G+GFV+F T EAA+K
Sbjct: 291 KANFTNVYVKNIPAEVTDEEFRELFAKYGDVTSSSLARSDEGKSRGFGFVNFTTHEAASK 350
Query: 167 SIEKVNGMLLNSKIVFVGKFIPRKEREKEL--------GEKAKLF--TNVYIKNFGEDFN 216
++E++NG + ++VG+ + ERE+EL EKA + N+YIKN G+D +
Sbjct: 351 AVEELNGKDFRGQELYVGRAQKKHEREEELRRSYEAARQEKANKYQGVNLYIKNLGDDVD 410
Query: 217 DEKLKEMFEPYGTITSYRVMNND------------------------------------- 239
D+KL++MF YG ITS +VM +
Sbjct: 411 DDKLRQMFSEYGPITSAKVMRDSVVESAAEDEKDKENKKEDEEEKEGETAEKKAETKEKR 470
Query: 240 --GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELK 289
GKS+GFGFV + +P+ A KAV N + +D K LYV AQ+K R +L+
Sbjct: 471 KLGKSKGFGFVCFSNPDDATKAVTEMNQRMIDNKPLYVALAQRKDVRKSQLE 522
Score = 44.7 bits (104), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 62/135 (45%), Gaps = 18/135 (13%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQ 261
++Y+ + L E+F G++ S RV + +S G+ +V Y + EKA++
Sbjct: 114 ASLYVGELDPSVTEAMLFELFSQIGSVASIRVCRDAVTRRSLGYAYVNYNATADGEKALE 173
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDER 321
N + G+ + +Q R L++ QG N+++KNLD +ID++
Sbjct: 174 DLNYTLIKGRPCRIMWSQ----RDPALRKTG-----------QG-NVFIKNLDVAIDNKA 217
Query: 322 LRKEFTPFGTITSAK 336
L F FG I S K
Sbjct: 218 LHDTFAAFGNILSCK 232
>gi|158512764|sp|A2Q848.1|PABP_ASPNC RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|134054831|emb|CAK43671.1| unnamed protein product [Aspergillus niger]
Length = 731
Score = 333 bits (853), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 159/262 (60%), Positives = 207/262 (79%), Gaps = 1/262 (0%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D ERAL+ +N+ +KG+P RIMWSQRDP+LRK+G GNVFIKNLD +IDNKA++DTF+AFG
Sbjct: 107 DGERALEDLNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDSAIDNKALHDTFAAFG 166
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCKVAQDE GNSKGYGFVH+ET EAAN +I+ VNGMLLN K VFVG I +K+R+ +
Sbjct: 167 NILSCKVAQDEFGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISKKDRQSK 226
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPE 254
E FTNVYIKN + +D++ ++MFE +G ITS + + +GKSRGFGFV + + E
Sbjct: 227 FEEMKANFTNVYIKNLDSEIDDDEFRKMFEKFGEITSATLSRDQEGKSRGFGFVNFSTHE 286
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A+ AV+ N KE+ + LYVGRAQKK ER +EL++++E ++E+ ++YQGVNLYVKNL
Sbjct: 287 SAQAAVEEMNDKEIRSQKLYVGRAQKKHEREEELRKQYEAARLEKASKYQGVNLYVKNLT 346
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
D IDDE+LR+ F P+GTITSAK
Sbjct: 347 DDIDDEKLRELFGPYGTITSAK 368
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 71/235 (30%), Positives = 122/235 (51%), Gaps = 18/235 (7%)
Query: 103 PSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETE 161
P+ + ++++ LD S+ +Y+ FS+ G + S +V +D S GY +V++
Sbjct: 46 PAANQPHSASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNT 105
Query: 162 EAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLK 221
+++E +N L+ K + + R ++ G+ NV+IKN +++ L
Sbjct: 106 ADGERALEDLNYTLIKGKPCRI-MWSQRDPALRKTGQ-----GNVFIKNLDSAIDNKALH 159
Query: 222 EMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
+ F +G I S +V ++ G S+G+GFV YE+ E A A++ NG ++ K ++VG
Sbjct: 160 DTFAAFGNILSCKVAQDEFGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHIS 219
Query: 281 KAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSA 335
K +R + +FE +K N+Y+KNLD IDD+ RK F FG ITSA
Sbjct: 220 KKDR----QSKFEEMKANF------TNVYIKNLDSEIDDDEFRKMFEKFGEITSA 264
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 34/50 (68%)
Query: 240 GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELK 289
GKS+GFGFV + SP+ A KAV N + V+GK LYV AQ+K R +L+
Sbjct: 432 GKSKGFGFVCFSSPDEASKAVTEMNQRMVNGKPLYVALAQRKDVRRSQLE 481
>gi|212540254|ref|XP_002150282.1| polyadenylate-binding protein [Talaromyces marneffei ATCC 18224]
gi|210067581|gb|EEA21673.1| polyadenylate-binding protein [Talaromyces marneffei ATCC 18224]
Length = 748
Score = 333 bits (853), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 161/262 (61%), Positives = 203/262 (77%), Gaps = 1/262 (0%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D ERAL+ +N+ +KGRP RIMWSQRDP+LRK+G GNVFIKNLD +IDNKA++DTF+AFG
Sbjct: 103 DGERALEDLNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDTAIDNKALHDTFAAFG 162
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCKVAQDE GNSKGYGFVH+ET EAAN +I+ VNGMLLN K VFVG I +K+R+ +
Sbjct: 163 NILSCKVAQDEFGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISKKDRQSK 222
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPE 254
E FTNVY+KN + DE+ +E+F +G ITS + +D GKSRGFGFV Y E
Sbjct: 223 FEEMKANFTNVYVKNIDPEVTDEEFRELFGKFGDITSATISRDDSGKSRGFGFVNYVDHE 282
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A+ AV N K+ G+ LYVGRAQKK ER +EL+R++E ++E+ ++YQGVNLYVKNL
Sbjct: 283 NAQTAVDDLNDKDFHGQKLYVGRAQKKHEREEELRRQYEAARLEKASKYQGVNLYVKNLT 342
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
D +DDE+LR+ F+ FGTITSAK
Sbjct: 343 DDVDDEKLRELFSAFGTITSAK 364
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 121/244 (49%), Gaps = 57/244 (23%)
Query: 107 KSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANK 166
K+ NV++KN+D + ++ + F FG I S +++D+ G S+G+GFV++ E A
Sbjct: 227 KANFTNVYVKNIDPEVTDEEFRELFGKFGDITSATISRDDSGKSRGFGFVNYVDHENAQT 286
Query: 167 SIEKVNGMLLNSKIVFVGKFIPRKEREKELG--------EKAKLF--TNVYIKNFGEDFN 216
+++ +N + + ++VG+ + ERE+EL EKA + N+Y+KN +D +
Sbjct: 287 AVDDLNDKDFHGQKLYVGRAQKKHEREEELRRQYEAARLEKASKYQGVNLYVKNLTDDVD 346
Query: 217 DEKLKEMFEPYGTITSYRVMNND------------------------------------- 239
DEKL+E+F +GTITS +VM +
Sbjct: 347 DEKLRELFSAFGTITSAKVMRDTVGAGSDSEKEETKESSEEVEEPKEEETNAKTEDEDKT 406
Query: 240 ----------GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELK 289
GKS+GFGFV + SP+ A KAV N + V+GK LYV AQ+K R +L+
Sbjct: 407 DAKKSDKKVFGKSKGFGFVCFSSPDEASKAVTEMNQRMVNGKPLYVALAQRKDVRKSQLE 466
Query: 290 RRFE 293
+
Sbjct: 467 ASIQ 470
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 61/135 (45%), Gaps = 18/135 (13%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQ 261
++Y+ + L E+F G + S RV + +S G+ +V Y + E+A++
Sbjct: 50 ASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALE 109
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDER 321
N + G+ + +Q R L++ QG N+++KNLD +ID++
Sbjct: 110 DLNYTLIKGRPCRIMWSQ----RDPALRKTG-----------QG-NVFIKNLDTAIDNKA 153
Query: 322 LRKEFTPFGTITSAK 336
L F FG I S K
Sbjct: 154 LHDTFAAFGNILSCK 168
>gi|353227476|emb|CCA77984.1| related to mRNA polyadenylate-binding protein PAB1 [Piriformospora
indica DSM 11827]
Length = 693
Score = 333 bits (853), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 161/265 (60%), Positives = 215/265 (81%), Gaps = 4/265 (1%)
Query: 76 DTERALDTMNFDALKGRP---IRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFS 132
D ERAL+ +N+ +KG+P RIMWSQRDP+LRK+G GN+FIKNLD+ IDNKA++DTF
Sbjct: 163 DGERALEQLNYSLIKGKPWHVSRIMWSQRDPALRKTGQGNIFIKNLDEGIDNKALHDTFV 222
Query: 133 AFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKER 192
AFG++LSCKVA DEQGNSKGYGFVH+ET EAA+ +I+ V+GMLLN K V+VG+ IPRKER
Sbjct: 223 AFGNVLSCKVAVDEQGNSKGYGFVHYETAEAADAAIKAVDGMLLNDKKVYVGRHIPRKER 282
Query: 193 EKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRV-MNNDGKSRGFGFVAYE 251
+ +L E FTN+Y+KN + ++++ +++FEPYGTITS + ++ DGKS+GFGFV YE
Sbjct: 283 QSKLDEIRAQFTNIYVKNLDTEIDEDEFRKLFEPYGTITSAVLNLDADGKSKGFGFVNYE 342
Query: 252 SPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVK 311
+ E A+KAV A N K+++GK L+VGRAQK+ ER +EL+R F+ K+ERL + QGVNLY+K
Sbjct: 343 THEMAQKAVDALNEKDINGKKLFVGRAQKRNERDEELRRTFDAAKMERLAKLQGVNLYIK 402
Query: 312 NLDDSIDDERLRKEFTPFGTITSAK 336
N+DD +DDE+LR EF P+GTITS+K
Sbjct: 403 NIDDDMDDEKLRAEFEPYGTITSSK 427
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 82/208 (39%), Positives = 121/208 (58%), Gaps = 11/208 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
N+++KNLD ID F +G+I S + D G SKG+GFV++ET E A K+++ +
Sbjct: 295 NIYVKNLDTEIDEDEFRKLFEPYGTITSAVLNLDADGKSKGFGFVNYETHEMAQKAVDAL 354
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEK---------AKL-FTNVYIKNFGEDFNDEKLK 221
N +N K +FVG+ R ER++EL AKL N+YIKN +D +DEKL+
Sbjct: 355 NEKDINGKKLFVGRAQKRNERDEELRRTFDAAKMERLAKLQGVNLYIKNIDDDMDDEKLR 414
Query: 222 EMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
FEPYGTITS ++M +D G S+GFGFV + +P+ A +A+ N K + K LYV AQ+
Sbjct: 415 AEFEPYGTITSSKIMRDDKGVSKGFGFVCFSTPDEATRAIAEMNNKMIGSKPLYVSLAQR 474
Query: 281 KAERTQELKRRFEMLKIERLNRYQGVNL 308
+ R Q+L+ + R+ + L
Sbjct: 475 RDVRRQQLESQISQRNQIRMQQAAAAGL 502
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 77/137 (56%), Gaps = 18/137 (13%)
Query: 77 TERALDTMNFDALKGRPIRIMWSQ----RDPSLRKS-------------GVGNVFIKNLD 119
++A+D +N + G+ + + +Q RD LR++ GV N++IKN+D
Sbjct: 347 AQKAVDALNEKDINGKKLFVGRAQKRNERDEELRRTFDAAKMERLAKLQGV-NLYIKNID 405
Query: 120 KSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSK 179
+D++ + F +G+I S K+ +D++G SKG+GFV F T + A ++I ++N ++ SK
Sbjct: 406 DDMDDEKLRAEFEPYGTITSSKIMRDDKGVSKGFGFVCFSTPDEATRAIAEMNNKMIGSK 465
Query: 180 IVFVGKFIPRKEREKEL 196
++V R R ++L
Sbjct: 466 PLYVSLAQRRDVRRQQL 482
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 63/135 (46%), Gaps = 15/135 (11%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQ 261
++Y+ + L E+F G + S RV + +S G+ +V Y + E+A++
Sbjct: 110 ASLYVGELDPSVTEAILFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNSSDGERALE 169
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDER 321
N + GK +V R ++R L++ QG N+++KNLD+ ID++
Sbjct: 170 QLNYSLIKGKPWHVSRIM-WSQRDPALRKTG-----------QG-NIFIKNLDEGIDNKA 216
Query: 322 LRKEFTPFGTITSAK 336
L F FG + S K
Sbjct: 217 LHDTFVAFGNVLSCK 231
>gi|320591142|gb|EFX03581.1| polyadenylate-binding protein [Grosmannia clavigera kw1407]
Length = 780
Score = 332 bits (852), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 151/263 (57%), Positives = 204/263 (77%), Gaps = 2/263 (0%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D E+AL+ +N+ +K RP RIMWSQRDP+LRK+G GN+FIKNLD +IDNKA++DTF+AFG
Sbjct: 112 DGEKALEELNYTLIKNRPCRIMWSQRDPALRKTGQGNIFIKNLDAAIDNKALHDTFAAFG 171
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCKVAQDE GNSKGYGFVH+ET+EAA ++I+ VNGMLLN K V+VG IP+K+R+ +
Sbjct: 172 NILSCKVAQDEHGNSKGYGFVHYETDEAAQQAIKHVNGMLLNEKKVYVGHHIPKKDRQSK 231
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND--GKSRGFGFVAYESP 253
E +TN+YIKN D D++ +++FE YG +TS + + GKSRGFGF+ + +
Sbjct: 232 FEEMKANYTNIYIKNLHADVTDDEFRKLFEQYGAVTSSTIARDQETGKSRGFGFINFTTH 291
Query: 254 EFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNL 313
E A KAV+ N +E+ G+ LYVGRAQKK ER +EL++ +E + E+ ++Y GVNLY+KNL
Sbjct: 292 ESAAKAVEELNSREIHGQELYVGRAQKKHEREEELRKSYEAARQEKASKYVGVNLYIKNL 351
Query: 314 DDSIDDERLRKEFTPFGTITSAK 336
DD +DDE+LR+ F P+G ITSAK
Sbjct: 352 DDEVDDEKLRELFAPYGPITSAK 374
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 81/262 (30%), Positives = 126/262 (48%), Gaps = 62/262 (23%)
Query: 107 KSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQD-EQGNSKGYGFVHFETEEAAN 165
K+ N++IKNL + + F +G++ S +A+D E G S+G+GF++F T E+A
Sbjct: 236 KANYTNIYIKNLHADVTDDEFRKLFEQYGAVTSSTIARDQETGKSRGFGFINFTTHESAA 295
Query: 166 KSIEKVNGMLLNSKIVFVGKFIPRKEREKEL--------GEKAKLFT--NVYIKNFGEDF 215
K++E++N ++ + ++VG+ + ERE+EL EKA + N+YIKN ++
Sbjct: 296 KAVEELNSREIHGQELYVGRAQKKHEREEELRKSYEAARQEKASKYVGVNLYIKNLDDEV 355
Query: 216 NDEKLKEMFEPYGTITSYRVMNND------------------------------------ 239
+DEKL+E+F PYG ITS +VM
Sbjct: 356 DDEKLRELFAPYGPITSAKVMRETASESDEEGKETKETEEVKEVKEEEEKPKVEGAAEGE 415
Query: 240 ---------------GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAER 284
GKS+GFGFV + +P+ A KAV N + V GK LYV AQKK R
Sbjct: 416 ADASGEKQAAARPKLGKSKGFGFVCFSNPDDATKAVTEMNQRMVSGKPLYVAIAQKKEVR 475
Query: 285 TQELKRRFEMLKIERLNRYQGV 306
+L+ + R+ + V
Sbjct: 476 KSQLEASIQARNTLRMQQAAAV 497
Score = 45.8 bits (107), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 61/135 (45%), Gaps = 18/135 (13%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQ 261
++Y+ E + L E+F G + S RV + +S G+ +V Y S EKA++
Sbjct: 59 ASLYVGELDESVTEAMLFELFSQIGPVASIRVCRDAVTRRSLGYAYVNYNSTADGEKALE 118
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDER 321
N + + + +Q R L++ QG N+++KNLD +ID++
Sbjct: 119 ELNYTLIKNRPCRIMWSQ----RDPALRKTG-----------QG-NIFIKNLDAAIDNKA 162
Query: 322 LRKEFTPFGTITSAK 336
L F FG I S K
Sbjct: 163 LHDTFAAFGNILSCK 177
>gi|389629168|ref|XP_003712237.1| polyadenylate-binding protein [Magnaporthe oryzae 70-15]
gi|158514092|sp|A4QUF0.1|PABP_MAGO7 RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|351644569|gb|EHA52430.1| polyadenylate-binding protein [Magnaporthe oryzae 70-15]
gi|440469069|gb|ELQ38192.1| polyadenylate-binding protein [Magnaporthe oryzae Y34]
gi|440487573|gb|ELQ67355.1| polyadenylate-binding protein [Magnaporthe oryzae P131]
Length = 762
Score = 332 bits (852), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 157/263 (59%), Positives = 205/263 (77%), Gaps = 2/263 (0%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D E+AL+ +N+ +KGRP RIMWSQRDP+LRK+G GNVFIKNLD +IDNKA++DTF+AFG
Sbjct: 114 DGEKALEELNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDVAIDNKALHDTFAAFG 173
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCKVAQDE GNSKGYGFVH+ET+EAA+++I+ VNGMLLN K V+VG IP+K+R+ +
Sbjct: 174 NILSCKVAQDENGNSKGYGFVHYETDEAASQAIKHVNGMLLNEKKVYVGHHIPKKDRQSK 233
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND--GKSRGFGFVAYESP 253
E FTN+Y+KN + D++ + +FE YG +TS + + GKSRGFGFV + S
Sbjct: 234 FDEMKANFTNIYVKNINPEVTDDEFRTLFEKYGDVTSSSLARDQETGKSRGFGFVNFTSH 293
Query: 254 EFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNL 313
E A KAVQ N KE G+ LYVGRAQKK ER +EL++ +E + E+ ++YQGVNLY+KNL
Sbjct: 294 EDASKAVQELNEKEFHGQNLYVGRAQKKHEREEELRKSYEAARQEKASKYQGVNLYIKNL 353
Query: 314 DDSIDDERLRKEFTPFGTITSAK 336
DD +DDE+LR+ F+ FG ITSAK
Sbjct: 354 DDEVDDEKLRQLFSEFGPITSAK 376
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 120/246 (48%), Gaps = 59/246 (23%)
Query: 107 KSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQD-EQGNSKGYGFVHFETEEAAN 165
K+ N+++KN++ + + F +G + S +A+D E G S+G+GFV+F + E A+
Sbjct: 238 KANFTNIYVKNINPEVTDDEFRTLFEKYGDVTSSSLARDQETGKSRGFGFVNFTSHEDAS 297
Query: 166 KSIEKVNGMLLNSKIVFVGKFIPRKEREKEL--------GEKAKLF--TNVYIKNFGEDF 215
K+++++N + + ++VG+ + ERE+EL EKA + N+YIKN ++
Sbjct: 298 KAVQELNEKEFHGQNLYVGRAQKKHEREEELRKSYEAARQEKASKYQGVNLYIKNLDDEV 357
Query: 216 NDEKLKEMFEPYGTITSYRVM-------------------------------NNDGKSR- 243
+DEKL+++F +G ITS +VM +D K
Sbjct: 358 DDEKLRQLFSEFGPITSAKVMRDSITEPGEEGESKEGEESEKNKENKPEEKEGDDSKPEE 417
Query: 244 ----------------GFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQE 287
GFGFV + +P+ A KAV N + V+ K LYV AQ+K R +
Sbjct: 418 KEGEDSKSKSKLGKSKGFGFVCFANPDDATKAVAEMNQRMVNNKPLYVALAQRKDVRKNQ 477
Query: 288 LKRRFE 293
L++ +
Sbjct: 478 LEQSIQ 483
Score = 44.3 bits (103), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 62/135 (45%), Gaps = 18/135 (13%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQ 261
++Y+ + L E+F G++ S RV + +S G+ +V Y + EKA++
Sbjct: 61 ASLYVGELDPSVTEAMLFELFSQIGSVASIRVCRDAVTRRSLGYAYVNYNTTADGEKALE 120
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDER 321
N + G+ + +Q R L++ QG N+++KNLD +ID++
Sbjct: 121 ELNYTLIKGRPCRIMWSQ----RDPALRKTG-----------QG-NVFIKNLDVAIDNKA 164
Query: 322 LRKEFTPFGTITSAK 336
L F FG I S K
Sbjct: 165 LHDTFAAFGNILSCK 179
>gi|355687608|gb|EHH26192.1| hypothetical protein EGK_16094 [Macaca mulatta]
gi|355749570|gb|EHH53969.1| hypothetical protein EGM_14691 [Macaca fascicularis]
Length = 370
Score = 332 bits (852), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 163/274 (59%), Positives = 211/274 (77%), Gaps = 7/274 (2%)
Query: 69 LGQPY-----MLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSID 123
LG Y + D ++ALDTMNFD +KG+ IR+MWSQRD LR+SG+GNVFIKNLDKSID
Sbjct: 51 LGYAYVNFLQLTDAQKALDTMNFDIIKGKSIRLMWSQRDAYLRRSGIGNVFIKNLDKSID 110
Query: 124 NKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFV 183
NK +Y+ FS FG ILS KV D+QG SKGY FVHF+ + AA+++IE++NG LL S VFV
Sbjct: 111 NKTLYEHFSGFGKILSSKVMSDDQG-SKGYAFVHFQNQSAADRAIEEMNGKLLKSCKVFV 169
Query: 184 GKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKS 242
G+F RK+RE EL KA FTN+YIKNFG D +DE+LK++F YG S +VM ++ GKS
Sbjct: 170 GRFKNRKDREAELRSKASEFTNIYIKNFGGDMDDERLKDVFSKYGKTLSVKVMTDSSGKS 229
Query: 243 RGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNR 302
+GFGFV+++S E A+KAV+ NG++++G++++VGRAQKK ER ELK+ FE LK ER+
Sbjct: 230 KGFGFVSFDSHEAAKKAVEEMNGRDINGQLIFVGRAQKKVERQAELKQMFEQLKRERIRG 289
Query: 303 YQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
YQGV LYVKNLDD+IDDE+LR EF+ FG+I K
Sbjct: 290 YQGVKLYVKNLDDTIDDEKLRNEFSSFGSIIRVK 323
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 77/219 (35%), Positives = 123/219 (56%), Gaps = 16/219 (7%)
Query: 77 TERALDTMNFDALKGRPIRI----MWSQRDPSLRK--SGVGNVFIKNLDKSIDNKAMYDT 130
+RA++ MN LK + + R+ LR S N++IKN +D++ + D
Sbjct: 150 ADRAIEEMNGKLLKSCKVFVGRFKNRKDREAELRSKASEFTNIYIKNFGGDMDDERLKDV 209
Query: 131 FSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRK 190
FS +G LS KV D G SKG+GFV F++ EAA K++E++NG +N +++FVG+ +
Sbjct: 210 FSKYGKTLSVKVMTDSSGKSKGFGFVSFDSHEAAKKAVEEMNGRDINGQLIFVGRAQKKV 269
Query: 191 EREKELG--------EKAKLFTNV--YIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDG 240
ER+ EL E+ + + V Y+KN + +DEKL+ F +G+I +VM +G
Sbjct: 270 ERQAELKQMFEQLKRERIRGYQGVKLYVKNLDDTIDDEKLRNEFSSFGSIIRVKVMQQEG 329
Query: 241 KSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQ 279
+S+GFGF+ + S E A KA+ NG + K + + AQ
Sbjct: 330 QSKGFGFICFSSLEDATKAMIEMNGCFLGSKPISIALAQ 368
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 120/228 (52%), Gaps = 17/228 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + ++ FSA G +LS ++ +D+ S GY +V+F A K++
Sbjct: 9 MASLYVGDLHADVTEDLLFRKFSAAGPVLSIRICRDQVTRRSLGYAYVNFLQLTDAQKAL 68
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N ++ GK I +++ + NV+IKN + +++ L E F +G
Sbjct: 69 DTMNFDIIK------GKSIRLMWSQRDAYLRRSGIGNVFIKNLDKSIDNKTLYEHFSGFG 122
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S +VM++D S+G+ FV +++ A++A++ NGK + ++VGR + + +R EL
Sbjct: 123 KILSSKVMSDDQGSKGYAFVHFQNQSAADRAIEEMNGKLLKSCKVFVGRFKNRKDREAEL 182
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ + + N+Y+KN +DDERL+ F+ +G S K
Sbjct: 183 RSKAS----------EFTNIYIKNFGGDMDDERLKDVFSKYGKTLSVK 220
>gi|407920118|gb|EKG13336.1| hypothetical protein MPH_09618 [Macrophomina phaseolina MS6]
Length = 768
Score = 332 bits (852), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 161/263 (61%), Positives = 201/263 (76%), Gaps = 2/263 (0%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D E+AL+ +N+ +KG+P RIMWSQRDP+LRK+G GNVFIKNLD +IDNKA++DTF+AFG
Sbjct: 110 DGEKALEELNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDGAIDNKALHDTFAAFG 169
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCKVAQDE GNSKGYGFVH+ET EAAN +I+ VNGMLLN K VFVG IP+K+R +
Sbjct: 170 NILSCKVAQDENGNSKGYGFVHYETAEAANNAIKAVNGMLLNEKKVFVGHHIPKKDRMSK 229
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM--NNDGKSRGFGFVAYESP 253
E FTNVY+KN + D++ +E+FE YG ITS + N GKSRGFGFV +
Sbjct: 230 FEEMKANFTNVYVKNIDLEVTDDEFRELFEKYGQITSASLAHDNETGKSRGFGFVNFVKH 289
Query: 254 EFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNL 313
E A KAV N K+ G+ LYVGRAQKK ER +EL++++E + E+ ++YQGVNLYVKNL
Sbjct: 290 ESAAKAVDELNDKDWKGQKLYVGRAQKKHEREEELRKQYEAARAEKQSKYQGVNLYVKNL 349
Query: 314 DDSIDDERLRKEFTPFGTITSAK 336
D +DDE+LR F PFGTITSAK
Sbjct: 350 HDDVDDEKLRDMFAPFGTITSAK 372
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 85/141 (60%), Gaps = 11/141 (7%)
Query: 107 KSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQD-EQGNSKGYGFVHFETEEAAN 165
K+ NV++KN+D + + + F +G I S +A D E G S+G+GFV+F E+A
Sbjct: 234 KANFTNVYVKNIDLEVTDDEFRELFEKYGQITSASLAHDNETGKSRGFGFVNFVKHESAA 293
Query: 166 KSIEKVNGMLLNSKIVFVGKFIPRKEREKEL--------GEKAKLF--TNVYIKNFGEDF 215
K+++++N + ++VG+ + ERE+EL EK + N+Y+KN +D
Sbjct: 294 KAVDELNDKDWKGQKLYVGRAQKKHEREEELRKQYEAARAEKQSKYQGVNLYVKNLHDDV 353
Query: 216 NDEKLKEMFEPYGTITSYRVM 236
+DEKL++MF P+GTITS +VM
Sbjct: 354 DDEKLRDMFAPFGTITSAKVM 374
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 34/50 (68%)
Query: 240 GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELK 289
GKS+GFGFV + +P+ A KAV N K ++GK LYV AQ+K R +L+
Sbjct: 440 GKSKGFGFVCFSNPDEATKAVTEMNQKMMNGKPLYVALAQRKDVRKSQLE 489
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 62/135 (45%), Gaps = 18/135 (13%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQ 261
++Y+ + L E+F G + S RV + +S G+ +V Y S + EKA++
Sbjct: 57 ASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNSSDDGEKALE 116
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDER 321
N + GK + +Q R L++ QG N+++KNLD +ID++
Sbjct: 117 ELNYTLIKGKPCRIMWSQ----RDPALRKTG-----------QG-NVFIKNLDGAIDNKA 160
Query: 322 LRKEFTPFGTITSAK 336
L F FG I S K
Sbjct: 161 LHDTFAAFGNILSCK 175
>gi|302693014|ref|XP_003036186.1| hypothetical protein SCHCODRAFT_66185 [Schizophyllum commune H4-8]
gi|300109882|gb|EFJ01284.1| hypothetical protein SCHCODRAFT_66185 [Schizophyllum commune H4-8]
Length = 632
Score = 332 bits (851), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 156/262 (59%), Positives = 202/262 (77%), Gaps = 1/262 (0%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D ERAL+ +N+ +K RP RIMWSQRDP+LRK+G GN+FIKNLD+ IDNKA++DTF+AFG
Sbjct: 99 DGERALEQLNYSLIKNRPCRIMWSQRDPALRKTGQGNIFIKNLDEQIDNKALHDTFAAFG 158
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
++LSCKVA DE GNSKGYGFVH+ET EAA +I+ VNGMLLN K V+VG I RKER+ +
Sbjct: 159 NVLSCKVATDEHGNSKGYGFVHYETAEAAENAIKNVNGMLLNDKKVYVGHHISRKERQSK 218
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPE 254
+ E FTN+YIKN + DE+ + +F G +TS + + +G+SRGFGFV YE+ E
Sbjct: 219 IDEMKAQFTNLYIKNIDPEVTDEEFEALFREQGNVTSSVIQRDEEGRSRGFGFVNYETHE 278
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A+KAV N K+ G+ L+V RAQKKAER +EL++ E ++E+L++YQG+NLYVKNLD
Sbjct: 279 EAQKAVDNLNDKDFHGRKLFVSRAQKKAEREEELRKAHEQARLEKLSKYQGLNLYVKNLD 338
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
D +DDE+LR EF PFGTITSAK
Sbjct: 339 DDVDDEKLRAEFEPFGTITSAK 360
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 79/197 (40%), Positives = 122/197 (61%), Gaps = 11/197 (5%)
Query: 107 KSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANK 166
K+ N++IKN+D + ++ F G++ S + +DE+G S+G+GFV++ET E A K
Sbjct: 223 KAQFTNLYIKNIDPEVTDEEFEALFREQGNVTSSVIQRDEEGRSRGFGFVNYETHEEAQK 282
Query: 167 SIEKVNGMLLNSKIVFVGKFIPRKEREKEL---GEKAKL-------FTNVYIKNFGEDFN 216
+++ +N + + +FV + + ERE+EL E+A+L N+Y+KN +D +
Sbjct: 283 AVDNLNDKDFHGRKLFVSRAQKKAEREEELRKAHEQARLEKLSKYQGLNLYVKNLDDDVD 342
Query: 217 DEKLKEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYV 275
DEKL+ FEP+GTITS +VM +D G S+GFGFV Y SPE A KAV N K + K LYV
Sbjct: 343 DEKLRAEFEPFGTITSAKVMRDDKGVSKGFGFVCYSSPEEASKAVAEMNNKMIGSKPLYV 402
Query: 276 GRAQKKAERTQELKRRF 292
AQ++ R Q+L+ +
Sbjct: 403 SHAQRREVRRQQLESQI 419
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 79/138 (57%), Gaps = 18/138 (13%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQ----RDPSLRKS-------------GVGNVFIKNL 118
+ ++A+D +N GR + + +Q R+ LRK+ G+ N+++KNL
Sbjct: 279 EAQKAVDNLNDKDFHGRKLFVSRAQKKAEREEELRKAHEQARLEKLSKYQGL-NLYVKNL 337
Query: 119 DKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNS 178
D +D++ + F FG+I S KV +D++G SKG+GFV + + E A+K++ ++N ++ S
Sbjct: 338 DDDVDDEKLRAEFEPFGTITSAKVMRDDKGVSKGFGFVCYSSPEEASKAVAEMNNKMIGS 397
Query: 179 KIVFVGKFIPRKEREKEL 196
K ++V R+ R ++L
Sbjct: 398 KPLYVSHAQRREVRRQQL 415
Score = 41.2 bits (95), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 60/135 (44%), Gaps = 18/135 (13%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQ 261
++Y+ + L E+F G + S RV + +S G+ +V Y + E+A++
Sbjct: 46 ASLYVGELDPTVTEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNAADGERALE 105
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDER 321
N + + + +Q R L++ QG N+++KNLD+ ID++
Sbjct: 106 QLNYSLIKNRPCRIMWSQ----RDPALRKTG-----------QG-NIFIKNLDEQIDNKA 149
Query: 322 LRKEFTPFGTITSAK 336
L F FG + S K
Sbjct: 150 LHDTFAAFGNVLSCK 164
>gi|19114289|ref|NP_593377.1| mRNA export shuttling protein [Schizosaccharomyces pombe 972h-]
gi|3123239|sp|P31209.2|PABP_SCHPO RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|2104439|emb|CAB08762.1| mRNA export shuttling protein [Schizosaccharomyces pombe]
Length = 653
Score = 332 bits (851), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 159/264 (60%), Positives = 202/264 (76%), Gaps = 1/264 (0%)
Query: 74 MLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSA 133
M D E+ALD +N+ +KGRP RIMWSQRDPSLRK G GNVFIKNLD +IDNKA++DTFSA
Sbjct: 131 MEDGEKALDELNYTLIKGRPCRIMWSQRDPSLRKMGTGNVFIKNLDPAIDNKALHDTFSA 190
Query: 134 FGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKERE 193
FG ILSCKVA DE GN+KGYGFVHF++ E+AN +IE VNGMLLN K V+VG + R+ER+
Sbjct: 191 FGKILSCKVAVDELGNAKGYGFVHFDSVESANAAIEHVNGMLLNDKKVYVGHHVSRRERQ 250
Query: 194 KELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYR-VMNNDGKSRGFGFVAYES 252
++ FTNVYIKN + +++ ++F +G ITS V + + K RGFGFV Y +
Sbjct: 251 SKVEALKANFTNVYIKNLDTEITEQEFSDLFGQFGEITSLSLVKDQNDKPRGFGFVNYAN 310
Query: 253 PEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKN 312
E A+KAV N KE GK LYVGRAQKK ER +EL++R+E +K+E++N+YQGVNL++KN
Sbjct: 311 HECAQKAVDELNDKEYKGKKLYVGRAQKKHEREEELRKRYEQMKLEKMNKYQGVNLFIKN 370
Query: 313 LDDSIDDERLRKEFTPFGTITSAK 336
L D +DDERL+ EF+ FGTITSAK
Sbjct: 371 LQDEVDDERLKAEFSAFGTITSAK 394
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 78/207 (37%), Positives = 120/207 (57%), Gaps = 11/207 (5%)
Query: 107 KSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANK 166
K+ NV+IKNLD I + D F FG I S + +D+ +G+GFV++ E A K
Sbjct: 257 KANFTNVYIKNLDTEITEQEFSDLFGQFGEITSLSLVKDQNDKPRGFGFVNYANHECAQK 316
Query: 167 SIEKVNGMLLNSKIVFVGKFIPRKEREKELG---EKAKL-------FTNVYIKNFGEDFN 216
+++++N K ++VG+ + ERE+EL E+ KL N++IKN ++ +
Sbjct: 317 AVDELNDKEYKGKKLYVGRAQKKHEREEELRKRYEQMKLEKMNKYQGVNLFIKNLQDEVD 376
Query: 217 DEKLKEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYV 275
DE+LK F +GTITS ++M ++ GKS+GFGFV Y +PE A KAV N + + GK LYV
Sbjct: 377 DERLKAEFSAFGTITSAKIMTDEQGKSKGFGFVCYTTPEEANKAVTEMNQRMLAGKPLYV 436
Query: 276 GRAQKKAERTQELKRRFEMLKIERLNR 302
AQ+K R +L+ + + RL +
Sbjct: 437 ALAQRKEVRRSQLEAQIQARNQFRLQQ 463
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 118/234 (50%), Gaps = 18/234 (7%)
Query: 103 PSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETE 161
PS ++++ LD S+ +++ F++ G + S +V +D S GY +V+F
Sbjct: 72 PSGTAPTSASLYVGELDPSVTEAMLFELFNSIGPVASIRVCRDAVTRRSLGYAYVNFHNM 131
Query: 162 EAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLK 221
E K+++++N L+ + + + R +++G NV+IKN +++ L
Sbjct: 132 EDGEKALDELNYTLIKGRPCRI-MWSQRDPSLRKMGTG-----NVFIKNLDPAIDNKALH 185
Query: 222 EMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
+ F +G I S +V ++ G ++G+GFV ++S E A A++ NG ++ K +YVG
Sbjct: 186 DTFSAFGKILSCKVAVDELGNAKGYGFVHFDSVESANAAIEHVNGMLLNDKKVYVG---- 241
Query: 281 KAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITS 334
+ RR K+E L + N+Y+KNLD I ++ F FG ITS
Sbjct: 242 -----HHVSRRERQSKVEAL-KANFTNVYIKNLDTEITEQEFSDLFGQFGEITS 289
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/125 (36%), Positives = 71/125 (56%), Gaps = 18/125 (14%)
Query: 77 TERALDTMNFDALKGRPIRIMWSQ----RDPSLRK-------------SGVGNVFIKNLD 119
++A+D +N KG+ + + +Q R+ LRK GV N+FIKNL
Sbjct: 314 AQKAVDELNDKEYKGKKLYVGRAQKKHEREEELRKRYEQMKLEKMNKYQGV-NLFIKNLQ 372
Query: 120 KSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSK 179
+D++ + FSAFG+I S K+ DEQG SKG+GFV + T E ANK++ ++N +L K
Sbjct: 373 DEVDDERLKAEFSAFGTITSAKIMTDEQGKSKGFGFVCYTTPEEANKAVTEMNQRMLAGK 432
Query: 180 IVFVG 184
++V
Sbjct: 433 PLYVA 437
>gi|326474523|gb|EGD98532.1| polyadenylate-binding protein [Trichophyton tonsurans CBS 112818]
Length = 676
Score = 332 bits (850), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 159/263 (60%), Positives = 202/263 (76%), Gaps = 2/263 (0%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D ERAL+ +N+ +KGRP RIMWSQRDP+LRK+G GNVFIKNLD +IDNKA++DTF+AFG
Sbjct: 111 DGERALEDLNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDTAIDNKALHDTFAAFG 170
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCKVAQDE GNSKGYGFVH+ET EAA +I+ VNGMLLN K VFVG I +K+R+ +
Sbjct: 171 NILSCKVAQDEYGNSKGYGFVHYETAEAATNAIKHVNGMLLNEKKVFVGHHIAKKDRQSK 230
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM--NNDGKSRGFGFVAYESP 253
E FTN+Y+KN +D DE+ + +FE YG ITS + N GKSRGFGFV +
Sbjct: 231 FEEMKANFTNIYVKNVEQDVTDEEFRGLFEKYGEITSATLSRDNETGKSRGFGFVNFSDH 290
Query: 254 EFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNL 313
E A AV+A N E+ G+ LYVGRAQKK ER +EL++++E +IE+ ++YQGVNLY+KNL
Sbjct: 291 EAASAAVEALNEYELKGQKLYVGRAQKKHEREEELRKQYEAARIEKASKYQGVNLYIKNL 350
Query: 314 DDSIDDERLRKEFTPFGTITSAK 336
D IDDE+LR+ F+ +G ITSAK
Sbjct: 351 SDDIDDEKLRELFSSYGNITSAK 373
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 120/235 (51%), Gaps = 18/235 (7%)
Query: 103 PSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETE 161
P+ + ++++ LD S+ +Y+ FS+ G + S +V +D S GY +V++
Sbjct: 50 PATSQPHSASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNT 109
Query: 162 EAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLK 221
+++E +N L+ + I +R+ L + + NV+IKN +++ L
Sbjct: 110 ADGERALEDLNYTLIKGRPC----RIMWSQRDPALRKTGQ--GNVFIKNLDTAIDNKALH 163
Query: 222 EMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
+ F +G I S +V ++ G S+G+GFV YE+ E A A++ NG ++ K ++VG
Sbjct: 164 DTFAAFGNILSCKVAQDEYGNSKGYGFVHYETAEAATNAIKHVNGMLLNEKKVFVGHHIA 223
Query: 281 KAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSA 335
K +R + +FE +K N+YVKN++ + DE R F +G ITSA
Sbjct: 224 KKDR----QSKFEEMKA------NFTNIYVKNVEQDVTDEEFRGLFEKYGEITSA 268
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 33/50 (66%)
Query: 240 GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELK 289
GKS+GFGFV + +P+ A KAV N + V GK LYV AQ+K R +L+
Sbjct: 440 GKSKGFGFVCFSNPDEASKAVTEMNQRMVHGKPLYVALAQRKDVRKSQLE 489
>gi|327299218|ref|XP_003234302.1| polyadenylate-binding protein [Trichophyton rubrum CBS 118892]
gi|326463196|gb|EGD88649.1| polyadenylate-binding protein [Trichophyton rubrum CBS 118892]
Length = 781
Score = 332 bits (850), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 159/263 (60%), Positives = 202/263 (76%), Gaps = 2/263 (0%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D ERAL+ +N+ +KGRP RIMWSQRDP+LRK+G GNVFIKNLD +IDNKA++DTF+AFG
Sbjct: 111 DGERALEDLNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDTAIDNKALHDTFAAFG 170
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCKVAQDE GNSKGYGFVH+ET EAA +I+ VNGMLLN K VFVG I +K+R+ +
Sbjct: 171 NILSCKVAQDEYGNSKGYGFVHYETAEAATNAIKHVNGMLLNEKKVFVGHHIAKKDRQSK 230
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM--NNDGKSRGFGFVAYESP 253
E FTN+Y+KN +D DE+ + +FE YG ITS + N GKSRGFGFV +
Sbjct: 231 FEEMKANFTNIYVKNVEQDVTDEEFRGLFEKYGEITSATLSRDNETGKSRGFGFVNFSDH 290
Query: 254 EFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNL 313
E A AV+A N E+ G+ LYVGRAQKK ER +EL++++E +IE+ ++YQGVNLY+KNL
Sbjct: 291 EAASAAVEALNEYELKGQKLYVGRAQKKHEREEELRKQYEAARIEKASKYQGVNLYIKNL 350
Query: 314 DDSIDDERLRKEFTPFGTITSAK 336
D IDDE+LR+ F+ +G ITSAK
Sbjct: 351 SDDIDDEKLRELFSSYGNITSAK 373
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 120/235 (51%), Gaps = 18/235 (7%)
Query: 103 PSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETE 161
P+ + ++++ LD S+ +Y+ FS+ G + S +V +D S GY +V++
Sbjct: 50 PATSQPHSASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNT 109
Query: 162 EAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLK 221
+++E +N L+ + + + R ++ G+ NV+IKN +++ L
Sbjct: 110 ADGERALEDLNYTLIKGRPCRI-MWSQRDPALRKTGQ-----GNVFIKNLDTAIDNKALH 163
Query: 222 EMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
+ F +G I S +V ++ G S+G+GFV YE+ E A A++ NG ++ K ++VG
Sbjct: 164 DTFAAFGNILSCKVAQDEYGNSKGYGFVHYETAEAATNAIKHVNGMLLNEKKVFVGHHIA 223
Query: 281 KAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSA 335
K +R + +FE +K N+YVKN++ + DE R F +G ITSA
Sbjct: 224 KKDR----QSKFEEMKANF------TNIYVKNVEQDVTDEEFRGLFEKYGEITSA 268
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 86/141 (60%), Gaps = 11/141 (7%)
Query: 107 KSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQD-EQGNSKGYGFVHFETEEAAN 165
K+ N+++KN+++ + ++ F +G I S +++D E G S+G+GFV+F EAA+
Sbjct: 235 KANFTNIYVKNVEQDVTDEEFRGLFEKYGEITSATLSRDNETGKSRGFGFVNFSDHEAAS 294
Query: 166 KSIEKVNGMLLNSKIVFVGKFIPRKEREKELG--------EKAKLF--TNVYIKNFGEDF 215
++E +N L + ++VG+ + ERE+EL EKA + N+YIKN +D
Sbjct: 295 AAVEALNEYELKGQKLYVGRAQKKHEREEELRKQYEAARIEKASKYQGVNLYIKNLSDDI 354
Query: 216 NDEKLKEMFEPYGTITSYRVM 236
+DEKL+E+F YG ITS +VM
Sbjct: 355 DDEKLRELFSSYGNITSAKVM 375
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 103/228 (45%), Gaps = 53/228 (23%)
Query: 80 ALDTMNFDALKGRPIRIMWSQ----RDPSLRKS-------------GVGNVFIKNLDKSI 122
A++ +N LKG+ + + +Q R+ LRK GV N++IKNL I
Sbjct: 296 AVEALNEYELKGQKLYVGRAQKKHEREEELRKQYEAARIEKASKYQGV-NLYIKNLSDDI 354
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
D++ + + FS++G+I S KV ++ V E K +K
Sbjct: 355 DDEKLRELFSSYGNITSAKVMRE--------AIVDVPAETEKGKEADK------------ 394
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GK 241
E+ KE G+K++ K + +++K K + G S + GK
Sbjct: 395 --------EKAKEAGDKSEE------KGESKSESEDKSKSEEKSEGKTESAKPEKRHLGK 440
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELK 289
S+GFGFV + +P+ A KAV N + V GK LYV AQ+K R +L+
Sbjct: 441 SKGFGFVCFSNPDEASKAVTEMNQRMVHGKPLYVALAQRKDVRKSQLE 488
>gi|310798668|gb|EFQ33561.1| 4 family polyadenylate binding protein [Glomerella graminicola
M1.001]
Length = 768
Score = 332 bits (850), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 153/262 (58%), Positives = 206/262 (78%), Gaps = 1/262 (0%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D E+AL+ +N+ +KGRP RIMWSQRDP+LRK+G GNVFIKNLD +IDNKA++DTF+AFG
Sbjct: 117 DGEKALEELNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDVAIDNKALHDTFAAFG 176
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCKVAQDE GNSKGYGFVH+ET+EAA+++I+ VNGMLLN K V+VG IP+K+R+ +
Sbjct: 177 NILSCKVAQDEHGNSKGYGFVHYETDEAASQAIKHVNGMLLNEKKVYVGHHIPKKDRQSK 236
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPE 254
E FTN+Y+KN + D++ +++F +G +TS + + +GKSRGFGFV + + E
Sbjct: 237 FEEMKANFTNIYVKNIANEVTDDEFRDLFTAFGDVTSSSLARDQEGKSRGFGFVNFTTHE 296
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A KAV NGK+ G+ LYVGRAQKK ER +EL++ +E ++E+ ++YQGVNLY+KNLD
Sbjct: 297 AAAKAVDDLNGKDFRGQDLYVGRAQKKHEREEELRKSYEAARMEKASKYQGVNLYIKNLD 356
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
D +DDE+LR+ F FG ITSAK
Sbjct: 357 DEVDDEKLRQLFADFGPITSAK 378
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 77/245 (31%), Positives = 124/245 (50%), Gaps = 62/245 (25%)
Query: 107 KSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANK 166
K+ N+++KN+ + + D F+AFG + S +A+D++G S+G+GFV+F T EAA K
Sbjct: 241 KANFTNIYVKNIANEVTDDEFRDLFTAFGDVTSSSLARDQEGKSRGFGFVNFTTHEAAAK 300
Query: 167 SIEKVNGMLLNSKIVFVGKFIPRKEREKELG--------EKAKLF--TNVYIKNFGEDFN 216
+++ +NG + ++VG+ + ERE+EL EKA + N+YIKN ++ +
Sbjct: 301 AVDDLNGKDFRGQDLYVGRAQKKHEREEELRKSYEAARMEKASKYQGVNLYIKNLDDEVD 360
Query: 217 DEKLKEMFEPYGTITSYRVMNND------------------------------------- 239
DEKL+++F +G ITS +VM ++
Sbjct: 361 DEKLRQLFADFGPITSAKVMRDNATESGNEDEGSSDDKENEPKKEEGEEKAEEAKSEDKE 420
Query: 240 ---------------GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAER 284
GKS+GFGFV + +P+ A KAV N + V+GK LYV AQ+K R
Sbjct: 421 DADKKADKKSDKKPHGKSKGFGFVCFSNPDDATKAVAEMNQRMVNGKPLYVALAQRKDVR 480
Query: 285 TQELK 289
+L+
Sbjct: 481 KSQLE 485
Score = 44.7 bits (104), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 62/135 (45%), Gaps = 18/135 (13%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQ 261
++Y+ + L E+F G++ S RV + +S G+ +V Y + EKA++
Sbjct: 64 ASLYVGELDPSVTEAMLFELFSQIGSVASIRVCRDAVTRRSLGYAYVNYNTTSDGEKALE 123
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDER 321
N + G+ + +Q R L++ QG N+++KNLD +ID++
Sbjct: 124 ELNYTLIKGRPCRIMWSQ----RDPALRKTG-----------QG-NVFIKNLDVAIDNKA 167
Query: 322 LRKEFTPFGTITSAK 336
L F FG I S K
Sbjct: 168 LHDTFAAFGNILSCK 182
>gi|402085655|gb|EJT80553.1| polyadenylate-binding protein [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 773
Score = 332 bits (850), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 157/263 (59%), Positives = 204/263 (77%), Gaps = 2/263 (0%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D E+ALD +N+ +KGRP RIMWSQRDP+LRK+G GNVFIKNLD +IDNKA++DTF+AFG
Sbjct: 114 DGEKALDELNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDVAIDNKALHDTFAAFG 173
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCKVAQDE GNSKGYGFVH+ET+EAA+++I+ VNGMLLN K V+VG IP+K+R+ +
Sbjct: 174 NILSCKVAQDEHGNSKGYGFVHYETDEAASQAIKHVNGMLLNEKKVYVGHHIPKKDRQSK 233
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND--GKSRGFGFVAYESP 253
E FTN+Y+KN D D+ + +FE +G +TS + + GKSRGFGFV + S
Sbjct: 234 FEEMKANFTNIYVKNIQLDVTDDDFRALFEKFGHVTSSSLARDQETGKSRGFGFVNFTSH 293
Query: 254 EFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNL 313
E A KAV+ N KE G+ LYVGRAQKK ER +EL+R +E + E+ ++YQGVNLY+KNL
Sbjct: 294 EDASKAVEELNEKEFHGQNLYVGRAQKKHEREEELRRSYEAARQEKASKYQGVNLYIKNL 353
Query: 314 DDSIDDERLRKEFTPFGTITSAK 336
DD +DD++LR+ F+ FG ITSAK
Sbjct: 354 DDEVDDDKLRQLFSEFGPITSAK 376
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 119/238 (50%), Gaps = 55/238 (23%)
Query: 107 KSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQD-EQGNSKGYGFVHFETEEAAN 165
K+ N+++KN+ + + F FG + S +A+D E G S+G+GFV+F + E A+
Sbjct: 238 KANFTNIYVKNIQLDVTDDDFRALFEKFGHVTSSSLARDQETGKSRGFGFVNFTSHEDAS 297
Query: 166 KSIEKVNGMLLNSKIVFVGKFIPRKEREKEL--------GEKAKLF--TNVYIKNFGEDF 215
K++E++N + + ++VG+ + ERE+EL EKA + N+YIKN ++
Sbjct: 298 KAVEELNEKEFHGQNLYVGRAQKKHEREEELRRSYEAARQEKASKYQGVNLYIKNLDDEV 357
Query: 216 NDEKLKEMFEPYGTITSYRVMNND------------------------------------ 239
+D+KL+++F +G ITS +VM
Sbjct: 358 DDDKLRQLFSEFGPITSAKVMRETLAEGADEPEAKDAADAKENVKEDEEAAKTEGDEGDA 417
Query: 240 --------GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELK 289
GKS+GFGFV + +P+ A KAV N + V+GK LYV AQ+K R +L+
Sbjct: 418 KADKKPKLGKSKGFGFVCFGNPDDATKAVAEMNQRMVNGKPLYVALAQRKDVRKNQLE 475
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 61/135 (45%), Gaps = 18/135 (13%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQ 261
++Y+ + L E+F G++ S RV + +S G+ +V Y + EKA+
Sbjct: 61 ASLYVGELDPSVTEAMLFELFSQIGSVASIRVCRDAVTRRSLGYAYVNYNTTSDGEKALD 120
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDER 321
N + G+ + +Q R L++ QG N+++KNLD +ID++
Sbjct: 121 ELNYTLIKGRPCRIMWSQ----RDPALRKTG-----------QG-NVFIKNLDVAIDNKA 164
Query: 322 LRKEFTPFGTITSAK 336
L F FG I S K
Sbjct: 165 LHDTFAAFGNILSCK 179
>gi|392558545|gb|EIW51732.1| polyadenylate binding protein [Trametes versicolor FP-101664 SS1]
Length = 631
Score = 331 bits (849), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 155/262 (59%), Positives = 205/262 (78%), Gaps = 1/262 (0%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D ERAL+ +N+ +KGR RIMWSQRDP+LRK+G GN+FIKNLD+ IDNKA++DTF+AFG
Sbjct: 60 DGERALEQLNYSLIKGRACRIMWSQRDPALRKTGQGNIFIKNLDEQIDNKALHDTFAAFG 119
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
++LSCKVA DE G SKGYGFVH+ET EAA +I+ VNGMLLN K V+VG I RKER+ +
Sbjct: 120 NVLSCKVATDEHGRSKGYGFVHYETAEAAETAIKAVNGMLLNDKKVYVGHHISRKERQSK 179
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRV-MNNDGKSRGFGFVAYESPE 254
+ E FTN+Y+KN + E+ ++FEP+G ITS + ++++GKSRGFGFV +++ E
Sbjct: 180 IEEMKNQFTNIYVKNVDPEVTQEEFVQLFEPFGRITSAVLQVDDEGKSRGFGFVNFDTHE 239
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A AV+A + +V G+ L+V RAQKKAER +EL+R +E K+E++++YQGVNLY+KNL+
Sbjct: 240 EAHAAVEALHDSDVKGRKLFVARAQKKAEREEELRRSYEQAKMEKMSKYQGVNLYIKNLE 299
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
D IDDERLR EF PFG ITSAK
Sbjct: 300 DDIDDERLRGEFEPFGNITSAK 321
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 73/192 (38%), Positives = 117/192 (60%), Gaps = 11/192 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
N+++KN+D + + F FG I S + D++G S+G+GFV+F+T E A+ ++E +
Sbjct: 189 NIYVKNVDPEVTQEEFVQLFEPFGRITSAVLQVDDEGKSRGFGFVNFDTHEEAHAAVEAL 248
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELG---EKAKL-------FTNVYIKNFGEDFNDEKLK 221
+ + + +FV + + ERE+EL E+AK+ N+YIKN +D +DE+L+
Sbjct: 249 HDSDVKGRKLFVARAQKKAEREEELRRSYEQAKMEKMSKYQGVNLYIKNLEDDIDDERLR 308
Query: 222 EMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
FEP+G ITS +VM ++ G S+GFGFV + SP+ A KAV N K + K LYV AQ+
Sbjct: 309 GEFEPFGNITSAKVMRDEKGISKGFGFVCFSSPDEATKAVAEMNNKMIGTKPLYVSLAQR 368
Query: 281 KAERTQELKRRF 292
+ R Q+L+ +
Sbjct: 369 REVRRQQLESQI 380
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 78/138 (56%), Gaps = 18/138 (13%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQ----RDPSLRKS-------------GVGNVFIKNL 118
+ A++ ++ +KGR + + +Q R+ LR+S GV N++IKNL
Sbjct: 240 EAHAAVEALHDSDVKGRKLFVARAQKKAEREEELRRSYEQAKMEKMSKYQGV-NLYIKNL 298
Query: 119 DKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNS 178
+ ID++ + F FG+I S KV +DE+G SKG+GFV F + + A K++ ++N ++ +
Sbjct: 299 EDDIDDERLRGEFEPFGNITSAKVMRDEKGISKGFGFVCFSSPDEATKAVAEMNNKMIGT 358
Query: 179 KIVFVGKFIPRKEREKEL 196
K ++V R+ R ++L
Sbjct: 359 KPLYVSLAQRREVRRQQL 376
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 31/135 (22%), Positives = 58/135 (42%), Gaps = 18/135 (13%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQ 261
++Y+ + L E+F G + S RV + +S G+ +V Y + E+A++
Sbjct: 7 ASLYVGELDPTVTEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNAADGERALE 66
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDER 321
N + G+ + +Q+ L + N+++KNLD+ ID++
Sbjct: 67 QLNYSLIKGRACRIMWSQRDPA----------------LRKTGQGNIFIKNLDEQIDNKA 110
Query: 322 LRKEFTPFGTITSAK 336
L F FG + S K
Sbjct: 111 LHDTFAAFGNVLSCK 125
>gi|302658195|ref|XP_003020804.1| hypothetical protein TRV_05080 [Trichophyton verrucosum HKI 0517]
gi|291184669|gb|EFE40186.1| hypothetical protein TRV_05080 [Trichophyton verrucosum HKI 0517]
Length = 816
Score = 331 bits (849), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 159/263 (60%), Positives = 202/263 (76%), Gaps = 2/263 (0%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D ERAL+ +N+ +KGRP RIMWSQRDP+LRK+G GNVFIKNLD +IDNKA++DTF+AFG
Sbjct: 127 DGERALEDLNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDTAIDNKALHDTFAAFG 186
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCKVAQDE GNSKGYGFVH+ET EAA +I+ VNGMLLN K VFVG I +K+R+ +
Sbjct: 187 NILSCKVAQDEYGNSKGYGFVHYETAEAATNAIKHVNGMLLNEKKVFVGHHIAKKDRQSK 246
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM--NNDGKSRGFGFVAYESP 253
E FTN+Y+KN +D DE+ + +FE YG ITS + N GKSRGFGFV +
Sbjct: 247 FEEMKANFTNIYVKNVEQDVTDEEFRGLFEKYGEITSATLSRDNETGKSRGFGFVNFSDH 306
Query: 254 EFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNL 313
E A AV+A N E+ G+ LYVGRAQKK ER +EL++++E +IE+ ++YQGVNLY+KNL
Sbjct: 307 EAASAAVEALNEYELKGQKLYVGRAQKKHEREEELRKQYEAARIEKASKYQGVNLYIKNL 366
Query: 314 DDSIDDERLRKEFTPFGTITSAK 336
D IDDE+LR+ F+ +G ITSAK
Sbjct: 367 SDDIDDEKLRELFSSYGNITSAK 389
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 120/235 (51%), Gaps = 18/235 (7%)
Query: 103 PSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETE 161
P+ + ++++ LD S+ +Y+ FS+ G + S +V +D S GY +V++
Sbjct: 66 PATSQPHSASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNT 125
Query: 162 EAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLK 221
+++E +N L+ + I +R+ L + + NV+IKN +++ L
Sbjct: 126 ADGERALEDLNYTLIKGRPC----RIMWSQRDPALRKTGQ--GNVFIKNLDTAIDNKALH 179
Query: 222 EMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
+ F +G I S +V ++ G S+G+GFV YE+ E A A++ NG ++ K ++VG
Sbjct: 180 DTFAAFGNILSCKVAQDEYGNSKGYGFVHYETAEAATNAIKHVNGMLLNEKKVFVGHHIA 239
Query: 281 KAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSA 335
K +R + +FE +K N+YVKN++ + DE R F +G ITSA
Sbjct: 240 KKDR----QSKFEEMKANF------TNIYVKNVEQDVTDEEFRGLFEKYGEITSA 284
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Query: 240 GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRR-FEMLKIE 298
GKS+GFGFV + +P+ A KAV N + V GK LYV AQ+K R ++ + L+ +
Sbjct: 456 GKSKGFGFVCFSNPDEASKAVTEMNQRMVHGKPLYVALAQRKDVRKSQVSTKVIHFLRSQ 515
Query: 299 RLNRYQ 304
N YQ
Sbjct: 516 VTNIYQ 521
>gi|301764847|ref|XP_002917846.1| PREDICTED: LOW QUALITY PROTEIN: polyadenylate-binding protein
4-like [Ailuropoda melanoleuca]
Length = 492
Score = 331 bits (849), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 160/264 (60%), Positives = 209/264 (79%), Gaps = 2/264 (0%)
Query: 74 MLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSA 133
+ D ++ALDTMNFD +KG+PIR+MWSQRD LRKSG+GNVFIKNLDKSIDNK +Y+ FSA
Sbjct: 160 LADAQKALDTMNFDMIKGKPIRLMWSQRDAYLRKSGIGNVFIKNLDKSIDNKTLYEHFSA 219
Query: 134 FGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKERE 193
FG ILS KV D+QG S+GY FVHF+ + AA+++IE++NG LL +FVG+F RK+RE
Sbjct: 220 FGKILSSKVMSDDQG-SRGYAFVHFQNQNAADRAIEEMNGALLKDCRLFVGRFKNRKDRE 278
Query: 194 KELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDG-KSRGFGFVAYES 252
EL K FTNVY+KNFG+D +DE+LKE+F YG S +VM + G KS+GFGFV+++S
Sbjct: 279 AELQNKVNEFTNVYVKNFGDDMDDERLKEVFSKYGKTLSVKVMTDSGGKSKGFGFVSFDS 338
Query: 253 PEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKN 312
E A+KAV+ NGK+V+G++L+VGRAQKK+ER ELK+ FE LK ER R QG+ LY+KN
Sbjct: 339 HEAAKKAVEEMNGKDVNGQLLFVGRAQKKSERQAELKQMFEQLKQERFRRCQGMKLYIKN 398
Query: 313 LDDSIDDERLRKEFTPFGTITSAK 336
LDD+IDDE+L +EF+ FG+I+ K
Sbjct: 399 LDDTIDDEKLWREFSSFGSISRVK 422
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 70/183 (38%), Positives = 112/183 (61%), Gaps = 10/183 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV++KN +D++ + + FS +G LS KV D G SKG+GFV F++ EAA K++E++
Sbjct: 290 NVYVKNFGDDMDDERLKEVFSKYGKTLSVKVMTDSGGKSKGFGFVSFDSHEAAKKAVEEM 349
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGE-----KAKLF-----TNVYIKNFGEDFNDEKLK 221
NG +N +++FVG+ + ER+ EL + K + F +YIKN + +DEKL
Sbjct: 350 NGKDVNGQLLFVGRAQKKSERQAELKQMFEQLKQERFRRCQGMKLYIKNLDDTIDDEKLW 409
Query: 222 EMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKK 281
F +G+I+ ++M +G+S+GFG + + SPE A KA+ NG+ + K LY+ AQ+
Sbjct: 410 REFSSFGSISRVKIMREEGRSKGFGLICFSSPEEATKAMAEMNGRILGSKPLYIALAQRP 469
Query: 282 AER 284
ER
Sbjct: 470 XER 472
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 121/227 (53%), Gaps = 17/227 (7%)
Query: 111 GNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQD-EQGNSKGYGFVHFETEEAANKSIE 169
++++ +L + ++ FSA G +LS ++ +D S GY +V+F A K+++
Sbjct: 109 ASLYVGDLSADVTEDLLFKKFSAVGPVLSIRICRDLVTRRSLGYAYVNFLKLADAQKALD 168
Query: 170 KVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGT 229
+N ++ GK I +++ + NV+IKN + +++ L E F +G
Sbjct: 169 TMNFDMIK------GKPIRLMWSQRDAYLRKSGIGNVFIKNLDKSIDNKTLYEHFSAFGK 222
Query: 230 ITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELK 289
I S +VM++D SRG+ FV +++ A++A++ NG + L+VGR + + +R EL+
Sbjct: 223 ILSSKVMSDDQGSRGYAFVHFQNQNAADRAIEEMNGALLKDCRLFVGRFKNRKDREAELQ 282
Query: 290 RRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
++N + N+YVKN D +DDERL++ F+ +G S K
Sbjct: 283 --------NKVNEF--TNVYVKNFGDDMDDERLKEVFSKYGKTLSVK 319
>gi|426247620|ref|XP_004023599.1| PREDICTED: LOW QUALITY PROTEIN: polyadenylate-binding protein
4-like [Ovis aries]
Length = 383
Score = 331 bits (849), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 161/282 (57%), Positives = 214/282 (75%), Gaps = 4/282 (1%)
Query: 56 TCHQLGSGAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFI 115
TCH G V Q + D ++ALDTMNFD +KG+ IR+MWSQRD LRKSG+GNVFI
Sbjct: 40 TCHPRSLGYAYVNFLQ--LADAQKALDTMNFDLIKGKSIRLMWSQRDAYLRKSGIGNVFI 97
Query: 116 KNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGML 175
KNLD+SIDNK +Y+ FSAFG ILS KV D+ G S+GY FVHF+ + AA+++IE++NG L
Sbjct: 98 KNLDRSIDNKTLYEHFSAFGKILSSKVMSDDHG-SRGYAFVHFQNQIAADRAIEEMNGTL 156
Query: 176 LNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRV 235
L +FVG+F RK+RE E KA FTNVYIKNFG++ +DE+LKE+F YG S +V
Sbjct: 157 LKDCRLFVGRFKSRKDREAEFQNKAHEFTNVYIKNFGDEMDDERLKEVFSKYGKTLSVKV 216
Query: 236 M-NNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEM 294
M ++ GKS+GFGFV+++S E A++AV+ NGK+++G++L+VGRAQKKAER ELK+ FE
Sbjct: 217 MTDSSGKSKGFGFVSFDSHEAAKRAVEEMNGKDINGQLLFVGRAQKKAERQAELKQMFEQ 276
Query: 295 LKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
LK ER R +G LY+KNLD++IDDE+LR+EF+ FG+I+ K
Sbjct: 277 LKHERFRRCRGAKLYIKNLDETIDDEKLRREFSSFGSISRVK 318
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 71/183 (38%), Positives = 111/183 (60%), Gaps = 10/183 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV+IKN +D++ + + FS +G LS KV D G SKG+GFV F++ EAA +++E++
Sbjct: 186 NVYIKNFGDEMDDERLKEVFSKYGKTLSVKVMTDSSGKSKGFGFVSFDSHEAAKRAVEEM 245
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGE-----KAKLF-----TNVYIKNFGEDFNDEKLK 221
NG +N +++FVG+ + ER+ EL + K + F +YIKN E +DEKL+
Sbjct: 246 NGKDINGQLLFVGRAQKKAERQAELKQMFEQLKHERFRRCRGAKLYIKNLDETIDDEKLR 305
Query: 222 EMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKK 281
F +G+I+ +VM +G+S+GFG + + S E A KA+ NG+ + K L + AQK
Sbjct: 306 REFSSFGSISRVKVMQEEGRSKGFGLICFSSAEEATKAMTEMNGRILGSKPLNIALAQKP 365
Query: 282 AER 284
ER
Sbjct: 366 XER 368
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 114/226 (50%), Gaps = 20/226 (8%)
Query: 111 GNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEK 170
++++ +L + ++ FSA G +LS S GY +V+F A K+++
Sbjct: 10 ASLYVGDLHADVTEDLLFKKFSAVGPVLSITC----HPRSLGYAYVNFLQLADAQKALDT 65
Query: 171 VNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTI 230
+N L+ GK I +++ + NV+IKN +++ L E F +G I
Sbjct: 66 MNFDLIK------GKSIRLMWSQRDAYLRKSGIGNVFIKNLDRSIDNKTLYEHFSAFGKI 119
Query: 231 TSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKR 290
S +VM++D SRG+ FV +++ A++A++ NG + L+VGR + + +R E +
Sbjct: 120 LSSKVMSDDHGSRGYAFVHFQNQIAADRAIEEMNGTLLKDCRLFVGRFKSRKDREAEFQN 179
Query: 291 RFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ ++ N+Y+KN D +DDERL++ F+ +G S K
Sbjct: 180 K----------AHEFTNVYIKNFGDEMDDERLKEVFSKYGKTLSVK 215
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 56/87 (64%), Gaps = 2/87 (2%)
Query: 94 IRIMWSQ-RDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKG 152
++ M+ Q + R+ ++IKNLD++ID++ + FS+FGSI KV Q E+G SKG
Sbjct: 270 LKQMFEQLKHERFRRCRGAKLYIKNLDETIDDEKLRREFSSFGSISRVKVMQ-EEGRSKG 328
Query: 153 YGFVHFETEEAANKSIEKVNGMLLNSK 179
+G + F + E A K++ ++NG +L SK
Sbjct: 329 FGLICFSSAEEATKAMTEMNGRILGSK 355
>gi|326478130|gb|EGE02140.1| polyadenylate-binding protein [Trichophyton equinum CBS 127.97]
Length = 782
Score = 331 bits (848), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 159/263 (60%), Positives = 202/263 (76%), Gaps = 2/263 (0%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D ERAL+ +N+ +KGRP RIMWSQRDP+LRK+G GNVFIKNLD +IDNKA++DTF+AFG
Sbjct: 111 DGERALEDLNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDTAIDNKALHDTFAAFG 170
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCKVAQDE GNSKGYGFVH+ET EAA +I+ VNGMLLN K VFVG I +K+R+ +
Sbjct: 171 NILSCKVAQDEYGNSKGYGFVHYETAEAATNAIKHVNGMLLNEKKVFVGHHIAKKDRQSK 230
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM--NNDGKSRGFGFVAYESP 253
E FTN+Y+KN +D DE+ + +FE YG ITS + N GKSRGFGFV +
Sbjct: 231 FEEMKANFTNIYVKNVEQDVTDEEFRGLFEKYGEITSATLSRDNETGKSRGFGFVNFSDH 290
Query: 254 EFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNL 313
E A AV+A N E+ G+ LYVGRAQKK ER +EL++++E +IE+ ++YQGVNLY+KNL
Sbjct: 291 EAASAAVEALNEYELKGQKLYVGRAQKKHEREEELRKQYEAARIEKASKYQGVNLYIKNL 350
Query: 314 DDSIDDERLRKEFTPFGTITSAK 336
D IDDE+LR+ F+ +G ITSAK
Sbjct: 351 SDDIDDEKLRELFSSYGNITSAK 373
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 120/235 (51%), Gaps = 18/235 (7%)
Query: 103 PSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETE 161
P+ + ++++ LD S+ +Y+ FS+ G + S +V +D S GY +V++
Sbjct: 50 PATSQPHSASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNT 109
Query: 162 EAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLK 221
+++E +N L+ + + + R ++ G+ NV+IKN +++ L
Sbjct: 110 ADGERALEDLNYTLIKGRPCRI-MWSQRDPALRKTGQ-----GNVFIKNLDTAIDNKALH 163
Query: 222 EMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
+ F +G I S +V ++ G S+G+GFV YE+ E A A++ NG ++ K ++VG
Sbjct: 164 DTFAAFGNILSCKVAQDEYGNSKGYGFVHYETAEAATNAIKHVNGMLLNEKKVFVGHHIA 223
Query: 281 KAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSA 335
K +R + +FE +K N+YVKN++ + DE R F +G ITSA
Sbjct: 224 KKDR----QSKFEEMKANF------TNIYVKNVEQDVTDEEFRGLFEKYGEITSA 268
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 33/50 (66%)
Query: 240 GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELK 289
GKS+GFGFV + +P+ A KAV N + V GK LYV AQ+K R +L+
Sbjct: 440 GKSKGFGFVCFSNPDEASKAVTEMNQRMVHGKPLYVALAQRKDVRKSQLE 489
>gi|121702907|ref|XP_001269718.1| polyadenylate-binding protein [Aspergillus clavatus NRRL 1]
gi|158512635|sp|A1CRM1.1|PABP_ASPCL RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|119397861|gb|EAW08292.1| polyadenylate-binding protein [Aspergillus clavatus NRRL 1]
Length = 754
Score = 331 bits (848), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 158/262 (60%), Positives = 205/262 (78%), Gaps = 1/262 (0%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D ERAL+ +N+ +KG+P RIMWSQRDP+LRK+G GNVFIKNLD +IDNKA++DTF+AFG
Sbjct: 104 DGERALEDLNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDSAIDNKALHDTFAAFG 163
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCKVAQDE GNSKGYGFVH+ET EAAN +I+ VNGMLLN K VFVG I +K+R+ +
Sbjct: 164 NILSCKVAQDEFGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISKKDRQSK 223
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGKSRGFGFVAYESPE 254
E FTN+YIKN D +E+ +++FE +G ITS + + +GKSRGFGFV Y + E
Sbjct: 224 FDEMKANFTNIYIKNIDPDVTEEEFRKIFEQFGEITSATLSRDPEGKSRGFGFVNYSTHE 283
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A+ AV + KEV + LYVGRAQKK ER +EL++++E ++E+ ++YQGVNLYVKNL
Sbjct: 284 SAQAAVDEMHDKEVKTQKLYVGRAQKKHEREEELRKQYEAARLEKASKYQGVNLYVKNLT 343
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
D +DDE+LR+ F P+GTITSAK
Sbjct: 344 DDVDDEKLRELFGPYGTITSAK 365
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/142 (35%), Positives = 89/142 (62%), Gaps = 10/142 (7%)
Query: 107 KSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANK 166
K+ N++IKN+D + + F FG I S +++D +G S+G+GFV++ T E+A
Sbjct: 228 KANFTNIYIKNIDPDVTEEEFRKIFEQFGEITSATLSRDPEGKSRGFGFVNYSTHESAQA 287
Query: 167 SIEKVNGMLLNSKIVFVGKFIPRKEREKELG--------EKAKLF--TNVYIKNFGEDFN 216
++++++ + ++ ++VG+ + ERE+EL EKA + N+Y+KN +D +
Sbjct: 288 AVDEMHDKEVKTQKLYVGRAQKKHEREEELRKQYEAARLEKASKYQGVNLYVKNLTDDVD 347
Query: 217 DEKLKEMFEPYGTITSYRVMNN 238
DEKL+E+F PYGTITS +VM +
Sbjct: 348 DEKLRELFGPYGTITSAKVMRD 369
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 118/226 (52%), Gaps = 18/226 (7%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSIEK 170
++++ LD S+ +Y+ FS+ G + S +V +D S GY +V++ +++E
Sbjct: 52 SLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALED 111
Query: 171 VNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTI 230
+N L+ K + + R ++ G+ NV+IKN +++ L + F +G I
Sbjct: 112 LNYTLIKGKPCRI-MWSQRDPALRKTGQ-----GNVFIKNLDSAIDNKALHDTFAAFGNI 165
Query: 231 TSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELK 289
S +V ++ G S+G+GFV YE+ E A A++ NG ++ K ++VG K +R +
Sbjct: 166 LSCKVAQDEFGNSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISKKDR----Q 221
Query: 290 RRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSA 335
+F+ +K N+Y+KN+D + +E RK F FG ITSA
Sbjct: 222 SKFDEMKANF------TNIYIKNIDPDVTEEEFRKIFEQFGEITSA 261
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 34/50 (68%)
Query: 240 GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELK 289
GKS+GFGFV + SP+ A KAV N + V+GK LYV AQ+K R +L+
Sbjct: 425 GKSKGFGFVCFSSPDEASKAVTEMNQRMVNGKPLYVALAQRKDVRRSQLE 474
>gi|302500992|ref|XP_003012489.1| hypothetical protein ARB_01449 [Arthroderma benhamiae CBS 112371]
gi|291176047|gb|EFE31849.1| hypothetical protein ARB_01449 [Arthroderma benhamiae CBS 112371]
Length = 801
Score = 331 bits (848), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 159/263 (60%), Positives = 202/263 (76%), Gaps = 2/263 (0%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D ERAL+ +N+ +KGRP RIMWSQRDP+LRK+G GNVFIKNLD +IDNKA++DTF+AFG
Sbjct: 111 DGERALEDLNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDTAIDNKALHDTFAAFG 170
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCKVAQDE GNSKGYGFVH+ET EAA +I+ VNGMLLN K VFVG I +K+R+ +
Sbjct: 171 NILSCKVAQDEYGNSKGYGFVHYETAEAATNAIKHVNGMLLNEKKVFVGHHIAKKDRQSK 230
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM--NNDGKSRGFGFVAYESP 253
E FTN+Y+KN +D DE+ + +FE YG ITS + N GKSRGFGFV +
Sbjct: 231 FEEMKANFTNIYVKNVEQDVTDEEFRGLFEKYGEITSATLSRDNETGKSRGFGFVNFSDH 290
Query: 254 EFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNL 313
E A AV+A N E+ G+ LYVGRAQKK ER +EL++++E +IE+ ++YQGVNLY+KNL
Sbjct: 291 EAASAAVEALNEYELKGQKLYVGRAQKKHEREEELRKQYEAARIEKASKYQGVNLYIKNL 350
Query: 314 DDSIDDERLRKEFTPFGTITSAK 336
D IDDE+LR+ F+ +G ITSAK
Sbjct: 351 SDDIDDEKLRELFSSYGNITSAK 373
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 120/235 (51%), Gaps = 18/235 (7%)
Query: 103 PSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETE 161
P+ + ++++ LD S+ +Y+ FS+ G + S +V +D S GY +V++
Sbjct: 50 PATSQPHSASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNT 109
Query: 162 EAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLK 221
+++E +N L+ + I +R+ L + + NV+IKN +++ L
Sbjct: 110 ADGERALEDLNYTLIKGRPC----RIMWSQRDPALRKTGQ--GNVFIKNLDTAIDNKALH 163
Query: 222 EMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
+ F +G I S +V ++ G S+G+GFV YE+ E A A++ NG ++ K ++VG
Sbjct: 164 DTFAAFGNILSCKVAQDEYGNSKGYGFVHYETAEAATNAIKHVNGMLLNEKKVFVGHHIA 223
Query: 281 KAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSA 335
K +R + +FE +K N+YVKN++ + DE R F +G ITSA
Sbjct: 224 KKDR----QSKFEEMKANF------TNIYVKNVEQDVTDEEFRGLFEKYGEITSA 268
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 44/78 (56%), Gaps = 7/78 (8%)
Query: 240 GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIER 299
GKS+GFGFV + +P+ A KAV N + V GK LYV AQ+K R ++ K+
Sbjct: 440 GKSKGFGFVCFSNPDEASKAVTEMNQRMVHGKPLYVALAQRKDVRKSQVS-----TKVIH 494
Query: 300 LNRYQGVNLYVKNLDDSI 317
L R Q N+Y L+ SI
Sbjct: 495 LIRSQFTNIY--QLEASI 510
>gi|85097328|ref|XP_960425.1| polyadenylate-binding protein [Neurospora crassa OR74A]
gi|74696454|sp|Q7S6N6.1|PABP_NEUCR RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|28921916|gb|EAA31189.1| polyadenylate-binding protein [Neurospora crassa OR74A]
Length = 764
Score = 331 bits (848), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 152/262 (58%), Positives = 205/262 (78%), Gaps = 1/262 (0%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D E+AL+ +N+ +KGRP RIMWSQRDP+LRK+G GN+FIKNLD +IDNKA++DTF+AFG
Sbjct: 113 DGEKALEELNYTLIKGRPCRIMWSQRDPALRKTGAGNIFIKNLDAAIDNKALHDTFAAFG 172
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCKVAQDE GNSKGYGFVH+ET+EAA+++I+ VNGMLLN K V+VG IP+K+R+ +
Sbjct: 173 NILSCKVAQDEHGNSKGYGFVHYETDEAASQAIKHVNGMLLNEKKVYVGHHIPKKDRQSK 232
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPE 254
E FTNVY+KN + DE+ +E+F +G +TS + + +GKSRGFGFV + + E
Sbjct: 233 FEEMKANFTNVYVKNINNEVTDEEFRELFAKFGEVTSSSLARDQEGKSRGFGFVNFTTHE 292
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A +AV NGK+ G+ LYVGRAQKK ER +EL++ +E ++E+ N+YQGVNLY+KNL
Sbjct: 293 AAAQAVDELNGKDFRGQDLYVGRAQKKHEREEELRKSYEAARLEKANKYQGVNLYIKNLG 352
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
D +DD++LR F+ +G ITSAK
Sbjct: 353 DDVDDDKLRAMFSEYGPITSAK 374
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 80/248 (32%), Positives = 129/248 (52%), Gaps = 52/248 (20%)
Query: 107 KSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANK 166
K+ NV++KN++ + ++ + F+ FG + S +A+D++G S+G+GFV+F T EAA +
Sbjct: 237 KANFTNVYVKNINNEVTDEEFRELFAKFGEVTSSSLARDQEGKSRGFGFVNFTTHEAAAQ 296
Query: 167 SIEKVNGMLLNSKIVFVGKFIPRKEREKELG--------EKAKLF--TNVYIKNFGEDFN 216
+++++NG + ++VG+ + ERE+EL EKA + N+YIKN G+D +
Sbjct: 297 AVDELNGKDFRGQDLYVGRAQKKHEREEELRKSYEAARLEKANKYQGVNLYIKNLGDDVD 356
Query: 217 DEKLKEMFEPYGTITSYRVMNND------------------------------------- 239
D+KL+ MF YG ITS +VM +
Sbjct: 357 DDKLRAMFSEYGPITSAKVMRDSLIEGSEEKDEKDKENKKEGETKEEEQNEGSEKKTEKK 416
Query: 240 -----GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEM 294
GKS+GFGFV + +P+ A KAV N + VDGK LYV AQ+K R +L+ +
Sbjct: 417 GDRKLGKSKGFGFVCFSNPDDATKAVTEMNQRMVDGKPLYVALAQRKDVRKSQLEASIQA 476
Query: 295 LKIERLNR 302
R+ +
Sbjct: 477 RNQLRMQQ 484
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 59/135 (43%), Gaps = 18/135 (13%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQ 261
++Y+ + L E+F G++ S RV + +S G+ +V Y + EKA++
Sbjct: 60 ASLYVGELDPSVTEAMLFELFSQIGSVASIRVCRDAVTRRSLGYAYVNYNTTADGEKALE 119
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDER 321
N + G+ + +Q+ L + N+++KNLD +ID++
Sbjct: 120 ELNYTLIKGRPCRIMWSQRDPA----------------LRKTGAGNIFIKNLDAAIDNKA 163
Query: 322 LRKEFTPFGTITSAK 336
L F FG I S K
Sbjct: 164 LHDTFAAFGNILSCK 178
>gi|410956870|ref|XP_003985059.1| PREDICTED: LOW QUALITY PROTEIN: polyadenylate-binding protein
4-like [Felis catus]
Length = 486
Score = 331 bits (848), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 161/264 (60%), Positives = 211/264 (79%), Gaps = 2/264 (0%)
Query: 74 MLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSA 133
+ D +RALDTMNFD +KG+PIR+MWSQRD LRKSG+GNVFIKNLD+SIDNK +Y+ FSA
Sbjct: 160 LADAQRALDTMNFDTIKGKPIRLMWSQRDAYLRKSGIGNVFIKNLDRSIDNKTLYEHFSA 219
Query: 134 FGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKERE 193
FG ILS KV D+QG S+GY FVHF+ + AA+++IE++NG LL +FVG+F RK+RE
Sbjct: 220 FGKILSSKVMSDDQG-SRGYAFVHFQNQIAADRAIEEMNGALLKDCRLFVGRFKNRKDRE 278
Query: 194 KELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYES 252
EL KA FTNVYIKNFG+D +DE+LKE+F YG S +VM ++ GKS+GFGFV+++S
Sbjct: 279 AELRNKANEFTNVYIKNFGDDMDDERLKEVFSKYGKTLSVKVMTDSSGKSKGFGFVSFDS 338
Query: 253 PEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKN 312
E A+KAV+ NGK+++G++L+VGRAQKK+ER ELK+ FE LK ER R QG+ LY+KN
Sbjct: 339 HEAAKKAVEEMNGKDINGQLLFVGRAQKKSERQAELKQVFEQLKQERFRRCQGMKLYIKN 398
Query: 313 LDDSIDDERLRKEFTPFGTITSAK 336
LDD+IDDE+L +EF+ FG+I+ K
Sbjct: 399 LDDTIDDEKLWREFSSFGSISRVK 422
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 72/183 (39%), Positives = 112/183 (61%), Gaps = 10/183 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV+IKN +D++ + + FS +G LS KV D G SKG+GFV F++ EAA K++E++
Sbjct: 290 NVYIKNFGDDMDDERLKEVFSKYGKTLSVKVMTDSSGKSKGFGFVSFDSHEAAKKAVEEM 349
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGE-----KAKLF-----TNVYIKNFGEDFNDEKLK 221
NG +N +++FVG+ + ER+ EL + K + F +YIKN + +DEKL
Sbjct: 350 NGKDINGQLLFVGRAQKKSERQAELKQVFEQLKQERFRRCQGMKLYIKNLDDTIDDEKLW 409
Query: 222 EMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKK 281
F +G+I+ ++M +G+S+GFG + + SPE A KA+ NG+ + K LY+ AQK
Sbjct: 410 REFSSFGSISRVKIMREEGRSKGFGLICFSSPEEATKAMAEMNGRILGSKPLYIALAQKP 469
Query: 282 AER 284
ER
Sbjct: 470 XER 472
>gi|338722679|ref|XP_001915947.2| PREDICTED: LOW QUALITY PROTEIN: poly(A) binding protein,
cytoplasmic 4-like [Equus caballus]
Length = 397
Score = 331 bits (848), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 161/274 (58%), Positives = 211/274 (77%), Gaps = 7/274 (2%)
Query: 69 LGQPY-----MLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSID 123
LG Y + D ++ALDTMNFD +KG+ IR+MWSQRD LRKSG+GNVFIKNLDKSID
Sbjct: 51 LGYAYVNFLQLADAQKALDTMNFDTIKGKSIRLMWSQRDAYLRKSGIGNVFIKNLDKSID 110
Query: 124 NKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFV 183
NK +Y+ FSAFG ILS KV D+QG S+GY FVHF+ + AA+++IE++NG LL +FV
Sbjct: 111 NKTLYEHFSAFGKILSSKVMSDDQG-SRGYAFVHFQNQMAADRAIEEMNGALLKDCRLFV 169
Query: 184 GKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GKS 242
G+F R++RE EL KA FTN+YIKNFG+D +D++L+E+F YG S +VM + GKS
Sbjct: 170 GRFKNRQDREAELQNKANEFTNIYIKNFGDDMDDKRLEEVFSKYGKTVSVKVMTDSTGKS 229
Query: 243 RGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNR 302
+GFGFV++ S E A+KAV+ NGK+++G++L+VGRAQKKAER ELK+ FE K ER R
Sbjct: 230 KGFGFVSFYSHEAAQKAVEEMNGKDINGQLLFVGRAQKKAERQAELKQMFEQQKQERFRR 289
Query: 303 YQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
QGV LY+KNLDD+IDDE+LR+EF+ FG+I+ K
Sbjct: 290 CQGVKLYIKNLDDTIDDEKLRREFSSFGSISRVK 323
Score = 130 bits (328), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 67/178 (37%), Positives = 108/178 (60%), Gaps = 10/178 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
N++IKN +D+K + + FS +G +S KV D G SKG+GFV F + EAA K++E++
Sbjct: 191 NIYIKNFGDDMDDKRLEEVFSKYGKTVSVKVMTDSTGKSKGFGFVSFYSHEAAQKAVEEM 250
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGE-----KAKLF-----TNVYIKNFGEDFNDEKLK 221
NG +N +++FVG+ + ER+ EL + K + F +YIKN + +DEKL+
Sbjct: 251 NGKDINGQLLFVGRAQKKAERQAELKQMFEQQKQERFRRCQGVKLYIKNLDDTIDDEKLR 310
Query: 222 EMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQ 279
F +G+I+ +VM +G+S+GFG + + SPE A +A+ NG+ + K L + AQ
Sbjct: 311 REFSSFGSISRVKVMKEEGRSKGFGLICFSSPEEATRAMTEMNGRILGSKPLNIALAQ 368
>gi|315052346|ref|XP_003175547.1| hypothetical protein MGYG_03072 [Arthroderma gypseum CBS 118893]
gi|311340862|gb|EFR00065.1| hypothetical protein MGYG_03072 [Arthroderma gypseum CBS 118893]
Length = 782
Score = 330 bits (847), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 158/263 (60%), Positives = 201/263 (76%), Gaps = 2/263 (0%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D ERAL+ +N+ +KGRP RIMWSQRDP+LRK+G GNVFIKNLD +IDNKA++DTF+AFG
Sbjct: 111 DGERALEDLNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDTAIDNKALHDTFAAFG 170
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCKVAQDE GNSKGYGFVH+ET EAA +I+ VNGMLLN K VFVG I +K+R+ +
Sbjct: 171 NILSCKVAQDEYGNSKGYGFVHYETAEAATNAIKHVNGMLLNEKKVFVGHHIAKKDRQSK 230
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM--NNDGKSRGFGFVAYESP 253
E FTN+Y+KN +D DE+ + +FE YG ITS + N GKSRGFGFV +
Sbjct: 231 FEEMKANFTNIYVKNVEQDVTDEEFRSLFEKYGEITSATLSRDNETGKSRGFGFVNFSDH 290
Query: 254 EFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNL 313
E A AV+ N E+ G+ LYVGRAQKK ER +EL++++E +IE+ ++YQGVNLY+KNL
Sbjct: 291 EAASAAVEGLNEYELKGQKLYVGRAQKKHEREEELRKQYEAARIEKASKYQGVNLYIKNL 350
Query: 314 DDSIDDERLRKEFTPFGTITSAK 336
D IDDE+LR+ F+ +G ITSAK
Sbjct: 351 SDDIDDEKLRELFSSYGNITSAK 373
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 120/235 (51%), Gaps = 18/235 (7%)
Query: 103 PSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETE 161
P+ + ++++ LD S+ +Y+ FS+ G + S +V +D S GY +V++
Sbjct: 50 PATSQPHSASLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNT 109
Query: 162 EAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLK 221
+++E +N L+ + + + R ++ G+ NV+IKN +++ L
Sbjct: 110 ADGERALEDLNYTLIKGRPCRI-MWSQRDPALRKTGQ-----GNVFIKNLDTAIDNKALH 163
Query: 222 EMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
+ F +G I S +V ++ G S+G+GFV YE+ E A A++ NG ++ K ++VG
Sbjct: 164 DTFAAFGNILSCKVAQDEYGNSKGYGFVHYETAEAATNAIKHVNGMLLNEKKVFVGHHIA 223
Query: 281 KAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSA 335
K +R + +FE +K N+YVKN++ + DE R F +G ITSA
Sbjct: 224 KKDR----QSKFEEMKANF------TNIYVKNVEQDVTDEEFRSLFEKYGEITSA 268
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 86/141 (60%), Gaps = 11/141 (7%)
Query: 107 KSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQD-EQGNSKGYGFVHFETEEAAN 165
K+ N+++KN+++ + ++ F +G I S +++D E G S+G+GFV+F EAA+
Sbjct: 235 KANFTNIYVKNVEQDVTDEEFRSLFEKYGEITSATLSRDNETGKSRGFGFVNFSDHEAAS 294
Query: 166 KSIEKVNGMLLNSKIVFVGKFIPRKEREKELG--------EKAKLF--TNVYIKNFGEDF 215
++E +N L + ++VG+ + ERE+EL EKA + N+YIKN +D
Sbjct: 295 AAVEGLNEYELKGQKLYVGRAQKKHEREEELRKQYEAARIEKASKYQGVNLYIKNLSDDI 354
Query: 216 NDEKLKEMFEPYGTITSYRVM 236
+DEKL+E+F YG ITS +VM
Sbjct: 355 DDEKLRELFSSYGNITSAKVM 375
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 33/50 (66%)
Query: 240 GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELK 289
GKS+GFGFV + +P+ A KAV N + V GK LYV AQ+K R +L+
Sbjct: 442 GKSKGFGFVCFSNPDEASKAVTEMNQRMVHGKPLYVALAQRKDVRKSQLE 491
>gi|367030019|ref|XP_003664293.1| hypothetical protein MYCTH_2306966 [Myceliophthora thermophila ATCC
42464]
gi|347011563|gb|AEO59048.1| hypothetical protein MYCTH_2306966 [Myceliophthora thermophila ATCC
42464]
Length = 787
Score = 330 bits (847), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 155/262 (59%), Positives = 205/262 (78%), Gaps = 1/262 (0%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D E+AL+ +N+ +KGRP RIMWSQRDP+LRK+G GNVFIKNLD +IDNKA++DTF+AFG
Sbjct: 117 DGEKALEELNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDTAIDNKALHDTFAAFG 176
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCKVAQDE GNSKGYGFVH+ET+EAA ++I+ VNGMLLN K V+VG IP+K+R+ +
Sbjct: 177 NILSCKVAQDENGNSKGYGFVHYETDEAAAQAIKHVNGMLLNEKKVYVGYHIPKKDRQSK 236
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPE 254
E +TNVY+KN + +E+ +E+F YG +TS + + +GKSRGFGFV + + +
Sbjct: 237 FEEMKANYTNVYVKNINLEVTEEEFRELFSKYGEVTSSTLARDQEGKSRGFGFVNFSTHD 296
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A KAV+ NGKE G+ LYVGRAQKK ER +EL++ +E + E+ N+YQGVNLY+KNL
Sbjct: 297 SAAKAVEELNGKEFRGQELYVGRAQKKHEREEELRKSYEAARAEKANKYQGVNLYIKNLA 356
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
D IDD++LR+ F+ FG ITSAK
Sbjct: 357 DDIDDDKLRQMFSEFGPITSAK 378
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 75/247 (30%), Positives = 124/247 (50%), Gaps = 64/247 (25%)
Query: 107 KSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANK 166
K+ NV++KN++ + + + FS +G + S +A+D++G S+G+GFV+F T ++A K
Sbjct: 241 KANYTNVYVKNINLEVTEEEFRELFSKYGEVTSSTLARDQEGKSRGFGFVNFSTHDSAAK 300
Query: 167 SIEKVNGMLLNSKIVFVGKFIPRKEREKEL--------GEKAKLF--TNVYIKNFGEDFN 216
++E++NG + ++VG+ + ERE+EL EKA + N+YIKN +D +
Sbjct: 301 AVEELNGKEFRGQELYVGRAQKKHEREEELRKSYEAARAEKANKYQGVNLYIKNLADDID 360
Query: 217 DEKLKEMFEPYGTITSYRVM-----------NNDGKSR---------------------- 243
D+KL++MF +G ITS +VM + +GK +
Sbjct: 361 DDKLRQMFSEFGPITSAKVMRDNPPDHHHSADKEGKDKENKKEGEQEAKKEGKEEGEKDG 420
Query: 244 ---------------------GFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKA 282
GFGFV + +P+ A KAV N + V+GK LYV AQ+K
Sbjct: 421 EAKEGEKKTEKKPERKLGKSKGFGFVCFSNPDDATKAVAEMNQRMVEGKPLYVALAQRKD 480
Query: 283 ERTQELK 289
R +L+
Sbjct: 481 VRKSQLE 487
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 62/135 (45%), Gaps = 18/135 (13%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQ 261
++Y+ + L E+F G++ S RV + +S G+ +V Y S EKA++
Sbjct: 64 ASLYVGELDPSVTEAMLFELFSQIGSVASIRVCRDAVTRRSLGYAYVNYNSTADGEKALE 123
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDER 321
N + G+ + +Q R L++ QG N+++KNLD +ID++
Sbjct: 124 ELNYTLIKGRPCRIMWSQ----RDPALRKTG-----------QG-NVFIKNLDTAIDNKA 167
Query: 322 LRKEFTPFGTITSAK 336
L F FG I S K
Sbjct: 168 LHDTFAAFGNILSCK 182
>gi|393245425|gb|EJD52935.1| polyadenylate binding protein [Auricularia delicata TFB-10046 SS5]
Length = 665
Score = 330 bits (846), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 156/262 (59%), Positives = 200/262 (76%), Gaps = 1/262 (0%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D ERALD +N+ +K R RIMWSQRDP+LRK+G GN+FIKNLD+ IDNKA++DTF+AFG
Sbjct: 100 DGERALDQLNYSLIKNRACRIMWSQRDPALRKTGQGNIFIKNLDEQIDNKALHDTFAAFG 159
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
++LSCKVA DE GNSKGYGFVH+ET EAA +I+ VNGMLLN K VFVG IPRKER+ +
Sbjct: 160 NVLSCKVATDEHGNSKGYGFVHYETAEAAENAIKSVNGMLLNDKKVFVGHHIPRKERQSK 219
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPE 254
+ E +TN+Y+KN + E +E+F +G ITS + + +GKSRGFGFV +ES E
Sbjct: 220 IDEMKAQYTNIYVKNLDPELGQEGFEELFGKFGNITSAALSKDEEGKSRGFGFVNFESHE 279
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A AV+ + E++G+ LYV RAQKK+ER EL++ +E K E+L++YQGVNLY+KNL+
Sbjct: 280 QAAAAVETLHDTEINGRKLYVARAQKKSEREDELRKSYENAKQEKLSKYQGVNLYIKNLE 339
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
D IDDE+LR EF PFGTITS K
Sbjct: 340 DDIDDEKLRAEFEPFGTITSCK 361
Score = 141 bits (356), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 76/197 (38%), Positives = 121/197 (61%), Gaps = 11/197 (5%)
Query: 107 KSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANK 166
K+ N+++KNLD + + + F FG+I S +++DE+G S+G+GFV+FE+ E A
Sbjct: 224 KAQYTNIYVKNLDPELGQEGFEELFGKFGNITSAALSKDEEGKSRGFGFVNFESHEQAAA 283
Query: 167 SIEKVNGMLLNSKIVFVGKFIPRKEREKEL------GEKAKLF----TNVYIKNFGEDFN 216
++E ++ +N + ++V + + ERE EL ++ KL N+YIKN +D +
Sbjct: 284 AVETLHDTEINGRKLYVARAQKKSEREDELRKSYENAKQEKLSKYQGVNLYIKNLEDDID 343
Query: 217 DEKLKEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYV 275
DEKL+ FEP+GTITS +VM ++ S+GFGFV + SP+ A KAV N K + K LYV
Sbjct: 344 DEKLRAEFEPFGTITSCKVMRDEKNTSKGFGFVCFSSPDEATKAVSEMNNKMIGSKPLYV 403
Query: 276 GRAQKKAERTQELKRRF 292
AQ++ R Q+L+ +
Sbjct: 404 SLAQRREVRRQQLETQI 420
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 77/134 (57%), Gaps = 18/134 (13%)
Query: 80 ALDTMNFDALKGRPIRIMWSQ----RDPSLRKS-------------GVGNVFIKNLDKSI 122
A++T++ + GR + + +Q R+ LRKS GV N++IKNL+ I
Sbjct: 284 AVETLHDTEINGRKLYVARAQKKSEREDELRKSYENAKQEKLSKYQGV-NLYIKNLEDDI 342
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
D++ + F FG+I SCKV +DE+ SKG+GFV F + + A K++ ++N ++ SK ++
Sbjct: 343 DDEKLRAEFEPFGTITSCKVMRDEKNTSKGFGFVCFSSPDEATKAVSEMNNKMIGSKPLY 402
Query: 183 VGKFIPRKEREKEL 196
V R+ R ++L
Sbjct: 403 VSLAQRREVRRQQL 416
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 59/134 (44%), Gaps = 18/134 (13%)
Query: 205 NVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQA 262
++Y+ + L E+F G + S RV + +S G+ +V Y + E+A+
Sbjct: 48 SLYVGELDPSVTEAMLFEVFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNAADGERALDQ 107
Query: 263 WNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERL 322
N + + + +Q R L++ QG N+++KNLD+ ID++ L
Sbjct: 108 LNYSLIKNRACRIMWSQ----RDPALRKTG-----------QG-NIFIKNLDEQIDNKAL 151
Query: 323 RKEFTPFGTITSAK 336
F FG + S K
Sbjct: 152 HDTFAAFGNVLSCK 165
>gi|336465951|gb|EGO54116.1| hypothetical protein NEUTE1DRAFT_87204 [Neurospora tetrasperma FGSC
2508]
gi|350287213|gb|EGZ68460.1| polyadenylate binding protein [Neurospora tetrasperma FGSC 2509]
Length = 764
Score = 330 bits (846), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 151/262 (57%), Positives = 205/262 (78%), Gaps = 1/262 (0%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D E+AL+ +N+ +KGRP RIMWSQRDP+LRK+G GN+FIKNLD +IDNKA++DTF+AFG
Sbjct: 113 DGEKALEELNYTLIKGRPCRIMWSQRDPALRKTGAGNIFIKNLDAAIDNKALHDTFAAFG 172
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCKVAQDE GNSKGYGFVH+ET+EAA+++I+ VNGMLLN K V+VG IP+K+R+ +
Sbjct: 173 NILSCKVAQDEHGNSKGYGFVHYETDEAASQAIKHVNGMLLNEKKVYVGHHIPKKDRQSK 232
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPE 254
E FTNVY+KN + DE+ +E+F +G +TS + + +GK+RGFGFV + + E
Sbjct: 233 FEEMKANFTNVYVKNINNEVTDEEFRELFAKFGEVTSSSLARDQEGKTRGFGFVNFTTHE 292
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A +AV NGK+ G+ LYVGRAQKK ER +EL++ +E ++E+ N+YQGVNLY+KNL
Sbjct: 293 AAAQAVDELNGKDFRGQDLYVGRAQKKHEREEELRKSYEAARLEKANKYQGVNLYIKNLG 352
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
D +DD++LR F+ +G ITSAK
Sbjct: 353 DDVDDDKLRAMFSEYGPITSAK 374
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 78/234 (33%), Positives = 125/234 (53%), Gaps = 51/234 (21%)
Query: 107 KSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANK 166
K+ NV++KN++ + ++ + F+ FG + S +A+D++G ++G+GFV+F T EAA +
Sbjct: 237 KANFTNVYVKNINNEVTDEEFRELFAKFGEVTSSSLARDQEGKTRGFGFVNFTTHEAAAQ 296
Query: 167 SIEKVNGMLLNSKIVFVGKFIPRKEREKELG--------EKAKLF--TNVYIKNFGEDFN 216
+++++NG + ++VG+ + ERE+EL EKA + N+YIKN G+D +
Sbjct: 297 AVDELNGKDFRGQDLYVGRAQKKHEREEELRKSYEAARLEKANKYQGVNLYIKNLGDDVD 356
Query: 217 DEKLKEMFEPYGTITSYRVMNND------------------------------------- 239
D+KL+ MF YG ITS +VM +
Sbjct: 357 DDKLRAMFSEYGPITSAKVMRDSLIEGSEEKDEKDKENKKEGEAEEEQKEGSEKKTEKKG 416
Query: 240 ----GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELK 289
GKS+GFGFV + +P+ A KAV N + VDGK LYV AQ+K R +L+
Sbjct: 417 DRKLGKSKGFGFVCFSNPDDATKAVTEMNQRMVDGKPLYVALAQRKDVRKSQLE 470
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 59/135 (43%), Gaps = 18/135 (13%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQ 261
++Y+ + L E+F G++ S RV + +S G+ +V Y + EKA++
Sbjct: 60 ASLYVGELDPSVTEAMLFELFSQIGSVASIRVCRDAVTRRSLGYAYVNYNTTADGEKALE 119
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDER 321
N + G+ + +Q+ L + N+++KNLD +ID++
Sbjct: 120 ELNYTLIKGRPCRIMWSQRDPA----------------LRKTGAGNIFIKNLDAAIDNKA 163
Query: 322 LRKEFTPFGTITSAK 336
L F FG I S K
Sbjct: 164 LHDTFAAFGNILSCK 178
>gi|154322853|ref|XP_001560741.1| hypothetical protein BC1G_00769 [Botryotinia fuckeliana B05.10]
gi|347837080|emb|CCD51652.1| similar to polyadenylate-binding protein [Botryotinia fuckeliana]
Length = 790
Score = 330 bits (845), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 158/263 (60%), Positives = 204/263 (77%), Gaps = 2/263 (0%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D E+AL+ +N+ +KGRP RIMWSQRDP+LRK+G GNVFIKNLD +IDNKA++DTF+AFG
Sbjct: 114 DGEKALEELNYTLIKGRPCRIMWSQRDPALRKNGQGNVFIKNLDVAIDNKALHDTFAAFG 173
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCKVAQDE G SKGYGFVH+ET+EAA ++I+ VNGMLLN K VFVG IP+K+R+ +
Sbjct: 174 NILSCKVAQDESGASKGYGFVHYETDEAAAQAIKHVNGMLLNEKKVFVGHHIPKKDRQSK 233
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESP 253
E FTN+Y+KN + +E+ +E+FE +G +TS + + GKSRGFGFV + +
Sbjct: 234 FEEMKANFTNIYVKNIPVEATEEEFRELFEKFGDVTSASLARDAETGKSRGFGFVNFINH 293
Query: 254 EFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNL 313
E A AV NGK+ G+ LYVGRAQKK ER +EL+R +E +IE+ ++YQGVNLYVKNL
Sbjct: 294 EHAATAVDELNGKDFKGQDLYVGRAQKKHEREEELRRSYEAARIEKASKYQGVNLYVKNL 353
Query: 314 DDSIDDERLRKEFTPFGTITSAK 336
DD IDDE+LR+ F FG+ITSAK
Sbjct: 354 DDDIDDEKLRELFQSFGSITSAK 376
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/244 (29%), Positives = 118/244 (48%), Gaps = 61/244 (25%)
Query: 107 KSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQD-EQGNSKGYGFVHFETEEAAN 165
K+ N+++KN+ + + F FG + S +A+D E G S+G+GFV+F E A
Sbjct: 238 KANFTNIYVKNIPVEATEEEFRELFEKFGDVTSASLARDAETGKSRGFGFVNFINHEHAA 297
Query: 166 KSIEKVNGMLLNSKIVFVGKFIPRKEREKELG--------EKAKLF--TNVYIKNFGEDF 215
+++++NG + ++VG+ + ERE+EL EKA + N+Y+KN +D
Sbjct: 298 TAVDELNGKDFKGQDLYVGRAQKKHEREEELRRSYEAARIEKASKYQGVNLYVKNLDDDI 357
Query: 216 NDEKLKEMFEPYGTITSYRVMNND------------------------------------ 239
+DEKL+E+F+ +G+ITS +VM +
Sbjct: 358 DDEKLRELFQSFGSITSAKVMRDTPAETAEAEEKKEKDEEKNKENKDTKETKETKKEGEA 417
Query: 240 --------------GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERT 285
GKS+GFGFV + +P+ A KAV N + V+ K LYV AQ+K R
Sbjct: 418 ETEEASAPKAKRSLGKSKGFGFVCFNNPDEATKAVSDMNQRMVNNKPLYVALAQRKDVRK 477
Query: 286 QELK 289
+L+
Sbjct: 478 SQLE 481
Score = 44.7 bits (104), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 62/135 (45%), Gaps = 18/135 (13%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQ 261
++Y+ + L E+F G++ S RV + +S G+ +V Y + EKA++
Sbjct: 61 ASLYVGELDTSVTEAMLFELFSQIGSVASIRVCRDAISRRSLGYAYVNYNTTADGEKALE 120
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDER 321
N + G+ + +Q R L++ QG N+++KNLD +ID++
Sbjct: 121 ELNYTLIKGRPCRIMWSQ----RDPALRK-----------NGQG-NVFIKNLDVAIDNKA 164
Query: 322 LRKEFTPFGTITSAK 336
L F FG I S K
Sbjct: 165 LHDTFAAFGNILSCK 179
>gi|260944998|ref|XP_002616797.1| hypothetical protein CLUG_04038 [Clavispora lusitaniae ATCC 42720]
gi|238850446|gb|EEQ39910.1| hypothetical protein CLUG_04038 [Clavispora lusitaniae ATCC 42720]
Length = 620
Score = 330 bits (845), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 159/262 (60%), Positives = 204/262 (77%), Gaps = 1/262 (0%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D ERAL+ +N+ + GRP RIMWSQRDPSLR++G GN+FIKNL IDNKA++DTFSAFG
Sbjct: 104 DGERALEQLNYSLIDGRPCRIMWSQRDPSLRRNGDGNIFIKNLHPDIDNKALHDTFSAFG 163
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
ILSCKVA DE G SK +GFVH+ET EAA+ +IE VNGM LN + VFVGK I +K+R +
Sbjct: 164 RILSCKVATDEHGRSKCFGFVHYETAEAADAAIENVNGMSLNDREVFVGKHISKKDRVAK 223
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITS-YRVMNNDGKSRGFGFVAYESPE 254
E FTNV++KNFG DF + +L MFEPYG ITS Y +++GKS+GFGF+ +E+ +
Sbjct: 224 FEEMKANFTNVFVKNFGSDFTEAELAAMFEPYGKITSLYFEKDSEGKSKGFGFINFENHD 283
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A KAV+ N KEV+G+ +YVGRAQKK ER +ELK+++E ++E+L++YQGVNL+VKNLD
Sbjct: 284 AAVKAVEELNDKEVNGQKIYVGRAQKKRERIEELKKQYETTRLEKLSKYQGVNLFVKNLD 343
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
DS+ E L +EF PFGTITSAK
Sbjct: 344 DSLTSEMLEEEFKPFGTITSAK 365
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/198 (36%), Positives = 116/198 (58%), Gaps = 11/198 (5%)
Query: 107 KSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANK 166
K+ NVF+KN + F +G I S +D +G SKG+GF++FE +AA K
Sbjct: 228 KANFTNVFVKNFGSDFTEAELAAMFEPYGKITSLYFEKDSEGKSKGFGFINFENHDAAVK 287
Query: 167 SIEKVNGMLLNSKIVFVGKFIPRKEREKELG--------EKAKLF--TNVYIKNFGEDFN 216
++E++N +N + ++VG+ ++ER +EL EK + N+++KN +
Sbjct: 288 AVEELNDKEVNGQKIYVGRAQKKRERIEELKKQYETTRLEKLSKYQGVNLFVKNLDDSLT 347
Query: 217 DEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYV 275
E L+E F+P+GTITS +VM + GKS+GFGFV + +PE A KA+ N + V GK LYV
Sbjct: 348 SEMLEEEFKPFGTITSAKVMVDETGKSKGFGFVCFSAPEEATKAITEMNQRMVLGKPLYV 407
Query: 276 GRAQKKAERTQELKRRFE 293
AQ+K R +L+++ +
Sbjct: 408 ALAQRKDVRRSQLEQQIQ 425
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 67/149 (44%), Gaps = 19/149 (12%)
Query: 191 EREKELGEKAKLFT-NVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGF 247
E E GE + + ++Y+ N+ L E+F P G ++S RV + KS G+ +
Sbjct: 37 ETEDSQGESVAVTSASLYVGELNPSVNEAVLYEIFSPLGQVSSIRVCRDAVTKKSLGYAY 96
Query: 248 VAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVN 307
V Y E E+A++ N +DG+ + +Q+ L R N
Sbjct: 97 VNYHKHEDGERALEQLNYSLIDGRPCRIMWSQRDPS----------------LRRNGDGN 140
Query: 308 LYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+++KNL ID++ L F+ FG I S K
Sbjct: 141 IFIKNLHPDIDNKALHDTFSAFGRILSCK 169
>gi|259515737|sp|P0CB38.1|PAB4L_HUMAN RecName: Full=Polyadenylate-binding protein 4-like;
Short=PABP-4-like; Short=Poly(A)-binding protein 4-like
Length = 370
Score = 330 bits (845), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 162/274 (59%), Positives = 211/274 (77%), Gaps = 7/274 (2%)
Query: 69 LGQPY-----MLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSID 123
LG Y + D ++ALDTMNFD +KG+ IR+MWSQRD LR+SG+GNVFIKNLDKSID
Sbjct: 51 LGYAYVNFLQLADAQKALDTMNFDIIKGKSIRLMWSQRDAYLRRSGIGNVFIKNLDKSID 110
Query: 124 NKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFV 183
NK +Y+ FSAFG ILS KV D+QG SKGY FVHF+ + AA+++IE++NG LL VFV
Sbjct: 111 NKTLYEHFSAFGKILSSKVMSDDQG-SKGYAFVHFQNQSAADRAIEEMNGKLLKGCKVFV 169
Query: 184 GKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKS 242
G+F RK+RE EL KA FTNVYIKNFG D +DE+LK++F YG S +VM ++ GKS
Sbjct: 170 GRFKNRKDREAELRSKASEFTNVYIKNFGGDMDDERLKDVFSKYGKTLSVKVMTDSSGKS 229
Query: 243 RGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNR 302
+GFGFV+++S E A+KAV+ NG++++G++++VGRAQKK ER ELK+ FE LK ER+
Sbjct: 230 KGFGFVSFDSHEAAKKAVEEMNGRDINGQLIFVGRAQKKVERQAELKQMFEQLKRERIRG 289
Query: 303 YQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
QGV LY+KNLDD+IDDE+LR EF+ FG+I+ K
Sbjct: 290 CQGVKLYIKNLDDTIDDEKLRNEFSSFGSISRVK 323
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 79/220 (35%), Positives = 125/220 (56%), Gaps = 16/220 (7%)
Query: 77 TERALDTMNFDALKGRPIRI----MWSQRDPSLRK--SGVGNVFIKNLDKSIDNKAMYDT 130
+RA++ MN LKG + + R+ LR S NV+IKN +D++ + D
Sbjct: 150 ADRAIEEMNGKLLKGCKVFVGRFKNRKDREAELRSKASEFTNVYIKNFGGDMDDERLKDV 209
Query: 131 FSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRK 190
FS +G LS KV D G SKG+GFV F++ EAA K++E++NG +N +++FVG+ +
Sbjct: 210 FSKYGKTLSVKVMTDSSGKSKGFGFVSFDSHEAAKKAVEEMNGRDINGQLIFVGRAQKKV 269
Query: 191 EREKELGEKAKLF----------TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDG 240
ER+ EL + + +YIKN + +DEKL+ F +G+I+ +VM +G
Sbjct: 270 ERQAELKQMFEQLKRERIRGCQGVKLYIKNLDDTIDDEKLRNEFSSFGSISRVKVMQEEG 329
Query: 241 KSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
+S+GFG + + SPE A KA+ NG+ + K L + AQ+
Sbjct: 330 QSKGFGLICFSSPEDATKAMTEMNGRILGSKPLSIALAQR 369
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 120/228 (52%), Gaps = 17/228 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + ++ FS G +LS ++ +D+ S GY +V+F A K++
Sbjct: 9 MASLYVGDLHADVTEDLLFRKFSTVGPVLSIRICRDQVTRRSLGYAYVNFLQLADAQKAL 68
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N ++ GK I +++ + NV+IKN + +++ L E F +G
Sbjct: 69 DTMNFDIIK------GKSIRLMWSQRDAYLRRSGIGNVFIKNLDKSIDNKTLYEHFSAFG 122
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S +VM++D S+G+ FV +++ A++A++ NGK + G ++VGR + + +R EL
Sbjct: 123 KILSSKVMSDDQGSKGYAFVHFQNQSAADRAIEEMNGKLLKGCKVFVGRFKNRKDREAEL 182
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ + + N+Y+KN +DDERL+ F+ +G S K
Sbjct: 183 RSKAS----------EFTNVYIKNFGGDMDDERLKDVFSKYGKTLSVK 220
>gi|119625554|gb|EAX05149.1| hCG1647909 [Homo sapiens]
Length = 369
Score = 330 bits (845), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 162/274 (59%), Positives = 211/274 (77%), Gaps = 7/274 (2%)
Query: 69 LGQPY-----MLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSID 123
LG Y + D ++ALDTMNFD +KG+ IR+MWSQRD LR+SG+GNVFIKNLDKSID
Sbjct: 51 LGYAYVNFLQLADAQKALDTMNFDIIKGKSIRLMWSQRDAYLRRSGIGNVFIKNLDKSID 110
Query: 124 NKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFV 183
NK +Y+ FSAFG ILS KV D+QG SKGY FVHF+ + AA+++IE++NG LL VFV
Sbjct: 111 NKTLYEHFSAFGKILSSKVMSDDQG-SKGYAFVHFQNQSAADRAIEEMNGKLLKGCKVFV 169
Query: 184 GKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKS 242
G+F RK+RE EL KA FTNVYIKNFG D +DE+LK++F YG S +VM ++ GKS
Sbjct: 170 GRFKNRKDREAELRSKASEFTNVYIKNFGGDMDDERLKDVFSKYGKTLSVKVMTDSSGKS 229
Query: 243 RGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNR 302
+GFGFV+++S E A+KAV+ NG++++G++++VGRAQKK ER ELK+ FE LK ER+
Sbjct: 230 KGFGFVSFDSHEAAKKAVEEMNGRDINGQLIFVGRAQKKVERQAELKQMFEQLKRERIRG 289
Query: 303 YQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
QGV LY+KNLDD+IDDE+LR EF+ FG+I+ K
Sbjct: 290 CQGVKLYIKNLDDTIDDEKLRNEFSSFGSISRVK 323
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 79/220 (35%), Positives = 125/220 (56%), Gaps = 16/220 (7%)
Query: 77 TERALDTMNFDALKGRPIRI----MWSQRDPSLRK--SGVGNVFIKNLDKSIDNKAMYDT 130
+RA++ MN LKG + + R+ LR S NV+IKN +D++ + D
Sbjct: 150 ADRAIEEMNGKLLKGCKVFVGRFKNRKDREAELRSKASEFTNVYIKNFGGDMDDERLKDV 209
Query: 131 FSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRK 190
FS +G LS KV D G SKG+GFV F++ EAA K++E++NG +N +++FVG+ +
Sbjct: 210 FSKYGKTLSVKVMTDSSGKSKGFGFVSFDSHEAAKKAVEEMNGRDINGQLIFVGRAQKKV 269
Query: 191 EREKELGEKAKLF----------TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDG 240
ER+ EL + + +YIKN + +DEKL+ F +G+I+ +VM +G
Sbjct: 270 ERQAELKQMFEQLKRERIRGCQGVKLYIKNLDDTIDDEKLRNEFSSFGSISRVKVMQEEG 329
Query: 241 KSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
+S+GFG + + SPE A KA+ NG+ + K L + AQ+
Sbjct: 330 QSKGFGLICFSSPEDATKAMTEMNGRILGSKPLSIALAQR 369
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 120/228 (52%), Gaps = 17/228 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + ++ FS G +LS ++ +D+ S GY +V+F A K++
Sbjct: 9 MASLYVGDLHADVTEDLLFRKFSTVGPVLSIRICRDQVTRRSLGYAYVNFLQLADAQKAL 68
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N ++ GK I +++ + NV+IKN + +++ L E F +G
Sbjct: 69 DTMNFDIIK------GKSIRLMWSQRDAYLRRSGIGNVFIKNLDKSIDNKTLYEHFSAFG 122
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S +VM++D S+G+ FV +++ A++A++ NGK + G ++VGR + + +R EL
Sbjct: 123 KILSSKVMSDDQGSKGYAFVHFQNQSAADRAIEEMNGKLLKGCKVFVGRFKNRKDREAEL 182
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ + + N+Y+KN +DDERL+ F+ +G S K
Sbjct: 183 RSKAS----------EFTNVYIKNFGGDMDDERLKDVFSKYGKTLSVK 220
>gi|173421|gb|AAA35320.1| poly(A)-binding protein, partial [Schizosaccharomyces pombe]
Length = 628
Score = 329 bits (844), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 158/264 (59%), Positives = 201/264 (76%), Gaps = 1/264 (0%)
Query: 74 MLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSA 133
M D E+ALD +N+ +KGRP RIMWSQRDPSLRK G GNVFIKNLD +IDNKA++DTFSA
Sbjct: 117 MEDGEKALDELNYTLIKGRPCRIMWSQRDPSLRKMGTGNVFIKNLDPAIDNKALHDTFSA 176
Query: 134 FGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKERE 193
FG ILSCKVA DE GN+KGYGFVHF++ E+AN +IE VNGMLLN K V+VG + R+ER+
Sbjct: 177 FGKILSCKVAVDELGNAKGYGFVHFDSVESANAAIEHVNGMLLNDKKVYVGHHVSRRERQ 236
Query: 194 KELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYR-VMNNDGKSRGFGFVAYES 252
++ FTNVYIKN + +++ ++F +G ITS V + + K RGFGFV Y +
Sbjct: 237 SKVEALKANFTNVYIKNLDTEITEQEFSDLFGQFGEITSLSLVKDQNDKPRGFGFVNYAN 296
Query: 253 PEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKN 312
E A+KAV N KE GK LYVGRAQKK ER +EL++ +E +K+E++N+YQGVNL++KN
Sbjct: 297 HECAQKAVDELNDKEYKGKKLYVGRAQKKHEREEELRKAYEQMKLEKMNKYQGVNLFIKN 356
Query: 313 LDDSIDDERLRKEFTPFGTITSAK 336
L D +DDERL+ EF+ FGTITSAK
Sbjct: 357 LQDEVDDERLKAEFSAFGTITSAK 380
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 78/207 (37%), Positives = 120/207 (57%), Gaps = 11/207 (5%)
Query: 107 KSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANK 166
K+ NV+IKNLD I + D F FG I S + +D+ +G+GFV++ E A K
Sbjct: 243 KANFTNVYIKNLDTEITEQEFSDLFGQFGEITSLSLVKDQNDKPRGFGFVNYANHECAQK 302
Query: 167 SIEKVNGMLLNSKIVFVGKFIPRKEREKELG---EKAKL-------FTNVYIKNFGEDFN 216
+++++N K ++VG+ + ERE+EL E+ KL N++IKN ++ +
Sbjct: 303 AVDELNDKEYKGKKLYVGRAQKKHEREEELRKAYEQMKLEKMNKYQGVNLFIKNLQDEVD 362
Query: 217 DEKLKEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYV 275
DE+LK F +GTITS ++M ++ GKS+GFGFV Y +PE A KAV N + + GK LYV
Sbjct: 363 DERLKAEFSAFGTITSAKIMTDEQGKSKGFGFVCYTTPEEANKAVTEMNQRMLAGKPLYV 422
Query: 276 GRAQKKAERTQELKRRFEMLKIERLNR 302
AQ+K R +L+ + + RL +
Sbjct: 423 ALAQRKEVRRSQLEAQIQARNQFRLQQ 449
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 118/234 (50%), Gaps = 18/234 (7%)
Query: 103 PSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETE 161
PS ++++ LD S+ +++ F++ G + S +V +D S GY +V+F
Sbjct: 58 PSGTAPTSASLYVGELDPSVTEAMLFELFNSIGPVASIRVCRDAVTRRSLGYAYVNFHNM 117
Query: 162 EAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLK 221
E K+++++N L+ + + + R +++G NV+IKN +++ L
Sbjct: 118 EDGEKALDELNYTLIKGRPCRI-MWSQRDPSLRKMGTG-----NVFIKNLDPAIDNKALH 171
Query: 222 EMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
+ F +G I S +V ++ G ++G+GFV ++S E A A++ NG ++ K +YVG
Sbjct: 172 DTFSAFGKILSCKVAVDELGNAKGYGFVHFDSVESANAAIEHVNGMLLNDKKVYVG---- 227
Query: 281 KAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITS 334
+ RR K+E L + N+Y+KNLD I ++ F FG ITS
Sbjct: 228 -----HHVSRRERQSKVEAL-KANFTNVYIKNLDTEITEQEFSDLFGQFGEITS 275
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 75/132 (56%), Gaps = 19/132 (14%)
Query: 77 TERALDTMNFDALKGRPIRIMWSQ----RDPSLRKS-------------GVGNVFIKNLD 119
++A+D +N KG+ + + +Q R+ LRK+ GV N+FIKNL
Sbjct: 300 AQKAVDELNDKEYKGKKLYVGRAQKKHEREEELRKAYEQMKLEKMNKYQGV-NLFIKNLQ 358
Query: 120 KSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSK 179
+D++ + FSAFG+I S K+ DEQG SKG+GFV + T E ANK++ ++N +L K
Sbjct: 359 DEVDDERLKAEFSAFGTITSAKIMTDEQGKSKGFGFVCYTTPEEANKAVTEMNQRMLAGK 418
Query: 180 IVFVGKFIPRKE 191
++V RKE
Sbjct: 419 PLYVA-LAQRKE 429
>gi|119189891|ref|XP_001245552.1| hypothetical protein CIMG_04993 [Coccidioides immitis RS]
gi|121937111|sp|Q1DXH0.1|PABP_COCIM RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|392868454|gb|EAS34245.2| polyadenylate-binding protein, cytoplasmic and nuclear
[Coccidioides immitis RS]
Length = 768
Score = 329 bits (844), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 158/263 (60%), Positives = 205/263 (77%), Gaps = 2/263 (0%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D ERAL+ +N+ +KGRP RIMWSQRDP+LRK+G GNVFIKNLD +IDNKA++DTF+AFG
Sbjct: 108 DGERALEDLNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDTAIDNKALHDTFAAFG 167
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCKVAQDE GNSKGYGFVH+ET EAA +I+ VNGMLLN K VFVG I +K+R+ +
Sbjct: 168 NILSCKVAQDEFGNSKGYGFVHYETAEAAQNAIKHVNGMLLNDKKVFVGHHIAKKDRQSK 227
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESP 253
E FTNVY+KN +D +E+ +++FE +G ITS + + GKSRGFGFV + S
Sbjct: 228 FEEMKANFTNVYVKNIDQDTTEEEFRDLFEKFGEITSATLARDAESGKSRGFGFVNFTSH 287
Query: 254 EFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNL 313
+ A AV+A N K+ G+ LYVGRAQKK ER +EL++++E +IE+ ++YQGVNLY+KNL
Sbjct: 288 DNAAAAVEALNDKDFKGQKLYVGRAQKKHEREEELRKQYEAARIEKASKYQGVNLYIKNL 347
Query: 314 DDSIDDERLRKEFTPFGTITSAK 336
D IDDE+LR+ F+ +GTITSAK
Sbjct: 348 SDDIDDEKLRELFSSYGTITSAK 370
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 82/248 (33%), Positives = 118/248 (47%), Gaps = 65/248 (26%)
Query: 107 KSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQD-EQGNSKGYGFVHFETEEAAN 165
K+ NV++KN+D+ + D F FG I S +A+D E G S+G+GFV+F + + A
Sbjct: 232 KANFTNVYVKNIDQDTTEEEFRDLFEKFGEITSATLARDAESGKSRGFGFVNFTSHDNAA 291
Query: 166 KSIEKVNGMLLNSKIVFVGKFIPRKEREKELG--------EKAKLF--TNVYIKNFGEDF 215
++E +N + ++VG+ + ERE+EL EKA + N+YIKN +D
Sbjct: 292 AAVEALNDKDFKGQKLYVGRAQKKHEREEELRKQYEAARIEKASKYQGVNLYIKNLSDDI 351
Query: 216 NDEKLKEMFEPYGTITSYRVM--------------------------------------N 237
+DEKL+E+F YGTITS +VM N
Sbjct: 352 DDEKLRELFSSYGTITSAKVMRDFAPESTSDSEKEAKKDSKEPETKEEEPKDEAGDNAEN 411
Query: 238 NDGK----------------SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKK 281
D K S+GFGFV + SP+ A KAV N + V GK LYV AQ+K
Sbjct: 412 KDNKENKAESKKSEKKPLGKSKGFGFVCFSSPDEASKAVTEMNQRMVHGKPLYVALAQRK 471
Query: 282 AERTQELK 289
R +L+
Sbjct: 472 DVRRSQLE 479
Score = 42.7 bits (99), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 61/135 (45%), Gaps = 18/135 (13%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQ 261
++Y+ + L E+F G + S RV + +S G+ +V Y + E+A++
Sbjct: 55 ASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALE 114
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDER 321
N + G+ + +Q R L++ QG N+++KNLD +ID++
Sbjct: 115 DLNYTLIKGRPCRIMWSQ----RDPALRKTG-----------QG-NVFIKNLDTAIDNKA 158
Query: 322 LRKEFTPFGTITSAK 336
L F FG I S K
Sbjct: 159 LHDTFAAFGNILSCK 173
>gi|303322729|ref|XP_003071356.1| Poly-binding protein FabM, putative [Coccidioides posadasii C735
delta SOWgp]
gi|240111058|gb|EER29211.1| Poly-binding protein FabM, putative [Coccidioides posadasii C735
delta SOWgp]
Length = 768
Score = 329 bits (844), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 158/263 (60%), Positives = 205/263 (77%), Gaps = 2/263 (0%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D ERAL+ +N+ +KGRP RIMWSQRDP+LRK+G GNVFIKNLD +IDNKA++DTF+AFG
Sbjct: 108 DGERALEDLNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDTAIDNKALHDTFAAFG 167
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCKVAQDE GNSKGYGFVH+ET EAA +I+ VNGMLLN K VFVG I +K+R+ +
Sbjct: 168 NILSCKVAQDEFGNSKGYGFVHYETAEAAQNAIKHVNGMLLNDKKVFVGHHIAKKDRQSK 227
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESP 253
E FTNVY+KN +D +E+ +++FE +G ITS + + GKSRGFGFV + S
Sbjct: 228 FEEMKANFTNVYVKNIDQDTTEEEFRDLFEKFGEITSATLARDAESGKSRGFGFVNFTSH 287
Query: 254 EFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNL 313
+ A AV+A N K+ G+ LYVGRAQKK ER +EL++++E +IE+ ++YQGVNLY+KNL
Sbjct: 288 DNAAAAVEALNDKDFKGQKLYVGRAQKKHEREEELRKQYEAARIEKASKYQGVNLYIKNL 347
Query: 314 DDSIDDERLRKEFTPFGTITSAK 336
D IDDE+LR+ F+ +GTITSAK
Sbjct: 348 SDDIDDEKLRELFSSYGTITSAK 370
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 82/248 (33%), Positives = 118/248 (47%), Gaps = 65/248 (26%)
Query: 107 KSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQD-EQGNSKGYGFVHFETEEAAN 165
K+ NV++KN+D+ + D F FG I S +A+D E G S+G+GFV+F + + A
Sbjct: 232 KANFTNVYVKNIDQDTTEEEFRDLFEKFGEITSATLARDAESGKSRGFGFVNFTSHDNAA 291
Query: 166 KSIEKVNGMLLNSKIVFVGKFIPRKEREKELG--------EKAKLF--TNVYIKNFGEDF 215
++E +N + ++VG+ + ERE+EL EKA + N+YIKN +D
Sbjct: 292 AAVEALNDKDFKGQKLYVGRAQKKHEREEELRKQYEAARIEKASKYQGVNLYIKNLSDDI 351
Query: 216 NDEKLKEMFEPYGTITSYRVM--------------------------------------N 237
+DEKL+E+F YGTITS +VM N
Sbjct: 352 DDEKLRELFSSYGTITSAKVMRDFAPESTSDSEKEAKKDSKEPETKEEEPKDEAGDNAEN 411
Query: 238 NDGK----------------SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKK 281
D K S+GFGFV + SP+ A KAV N + V GK LYV AQ+K
Sbjct: 412 KDNKENKAESKKSEKKPLGKSKGFGFVCFSSPDEASKAVTEMNQRMVHGKPLYVALAQRK 471
Query: 282 AERTQELK 289
R +L+
Sbjct: 472 DVRRSQLE 479
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 61/135 (45%), Gaps = 18/135 (13%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQ 261
++Y+ + L E+F G + S RV + +S G+ +V Y + E+A++
Sbjct: 55 ASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALE 114
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDER 321
N + G+ + +Q R L++ QG N+++KNLD +ID++
Sbjct: 115 DLNYTLIKGRPCRIMWSQ----RDPALRKTG-----------QG-NVFIKNLDTAIDNKA 158
Query: 322 LRKEFTPFGTITSAK 336
L F FG I S K
Sbjct: 159 LHDTFAAFGNILSCK 173
>gi|449547299|gb|EMD38267.1| hypothetical protein CERSUDRAFT_113433 [Ceriporiopsis subvermispora
B]
Length = 679
Score = 329 bits (844), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 154/262 (58%), Positives = 207/262 (79%), Gaps = 1/262 (0%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D ERAL+ +N+ +KGR RIMWSQRDP+LRK+G GN+FIKNLD+ IDNKA++DTF+AFG
Sbjct: 101 DGERALEQLNYSLIKGRACRIMWSQRDPALRKTGQGNIFIKNLDEGIDNKALHDTFAAFG 160
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
++LSCKVA DE G SKGYGFVH+ET EAA+ +I+ VNGMLLN K V+VG I RKER+ +
Sbjct: 161 NVLSCKVATDEHGRSKGYGFVHYETAEAADTAIKAVNGMLLNDKKVYVGPHISRKERQSK 220
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPE 254
+ E FTNVY+KN + DE+ +++FE +G +TS + + +G+S+GFGFV +E E
Sbjct: 221 IEEMKAQFTNVYVKNIDAEVTDEEFRQLFEQFGNVTSAVIQRDEEGRSKGFGFVNFEKHE 280
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A+K V++ + E++GK L+V RAQKKAER +EL++ +E K E+L++YQGVNLY+KNL+
Sbjct: 281 EAQKGVESLHDFELNGKKLFVTRAQKKAEREEELRKSYEQAKNEKLSKYQGVNLYIKNLE 340
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
D +DDERLR+EF PFGTITSAK
Sbjct: 341 DEVDDERLRQEFEPFGTITSAK 362
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 79/197 (40%), Positives = 121/197 (61%), Gaps = 11/197 (5%)
Query: 107 KSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANK 166
K+ NV++KN+D + ++ F FG++ S + +DE+G SKG+GFV+FE E A K
Sbjct: 225 KAQFTNVYVKNIDAEVTDEEFRQLFEQFGNVTSAVIQRDEEGRSKGFGFVNFEKHEEAQK 284
Query: 167 SIEKVNGMLLNSKIVFVGKFIPRKEREKEL--------GEKAKLF--TNVYIKNFGEDFN 216
+E ++ LN K +FV + + ERE+EL EK + N+YIKN ++ +
Sbjct: 285 GVESLHDFELNGKKLFVTRAQKKAEREEELRKSYEQAKNEKLSKYQGVNLYIKNLEDEVD 344
Query: 217 DEKLKEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYV 275
DE+L++ FEP+GTITS +VM ++ G S+GFGFV + SP+ A KAV N K + K LYV
Sbjct: 345 DERLRQEFEPFGTITSAKVMRDEKGSSKGFGFVCFSSPDEATKAVAEMNNKMIGTKPLYV 404
Query: 276 GRAQKKAERTQELKRRF 292
AQ++ R Q+L+ +
Sbjct: 405 SLAQRREVRRQQLESQI 421
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 80/138 (57%), Gaps = 18/138 (13%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQ----RDPSLRKS-------------GVGNVFIKNL 118
+ ++ +++++ L G+ + + +Q R+ LRKS GV N++IKNL
Sbjct: 281 EAQKGVESLHDFELNGKKLFVTRAQKKAEREEELRKSYEQAKNEKLSKYQGV-NLYIKNL 339
Query: 119 DKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNS 178
+ +D++ + F FG+I S KV +DE+G+SKG+GFV F + + A K++ ++N ++ +
Sbjct: 340 EDEVDDERLRQEFEPFGTITSAKVMRDEKGSSKGFGFVCFSSPDEATKAVAEMNNKMIGT 399
Query: 179 KIVFVGKFIPRKEREKEL 196
K ++V R+ R ++L
Sbjct: 400 KPLYVSLAQRREVRRQQL 417
Score = 42.7 bits (99), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 60/133 (45%), Gaps = 18/133 (13%)
Query: 206 VYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQAW 263
+Y+ + L E+F G + S RV + +S G+ +V Y + E+A++
Sbjct: 50 LYVGELDPTVTEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNAADGERALEQL 109
Query: 264 NGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLR 323
N + G+ + +Q R L++ QG N+++KNLD+ ID++ L
Sbjct: 110 NYSLIKGRACRIMWSQ----RDPALRKTG-----------QG-NIFIKNLDEGIDNKALH 153
Query: 324 KEFTPFGTITSAK 336
F FG + S K
Sbjct: 154 DTFAAFGNVLSCK 166
>gi|320032897|gb|EFW14847.1| polyadenylate-binding protein [Coccidioides posadasii str.
Silveira]
Length = 768
Score = 329 bits (844), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 158/263 (60%), Positives = 205/263 (77%), Gaps = 2/263 (0%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D ERAL+ +N+ +KGRP RIMWSQRDP+LRK+G GNVFIKNLD +IDNKA++DTF+AFG
Sbjct: 108 DGERALEDLNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDTAIDNKALHDTFAAFG 167
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCKVAQDE GNSKGYGFVH+ET EAA +I+ VNGMLLN K VFVG I +K+R+ +
Sbjct: 168 NILSCKVAQDEFGNSKGYGFVHYETAEAAQNAIKHVNGMLLNDKKVFVGHHIAKKDRQSK 227
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESP 253
E FTNVY+KN +D +E+ +++FE +G ITS + + GKSRGFGFV + S
Sbjct: 228 FEEMKANFTNVYVKNIDQDTTEEEFRDLFEKFGEITSATLARDAESGKSRGFGFVNFTSH 287
Query: 254 EFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNL 313
+ A AV+A N K+ G+ LYVGRAQKK ER +EL++++E +IE+ ++YQGVNLY+KNL
Sbjct: 288 DNAAAAVEALNDKDFKGQKLYVGRAQKKHEREEELRKQYEAARIEKASKYQGVNLYIKNL 347
Query: 314 DDSIDDERLRKEFTPFGTITSAK 336
D IDDE+LR+ F+ +GTITSAK
Sbjct: 348 SDDIDDEKLRELFSSYGTITSAK 370
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 82/248 (33%), Positives = 118/248 (47%), Gaps = 65/248 (26%)
Query: 107 KSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQD-EQGNSKGYGFVHFETEEAAN 165
K+ NV++KN+D+ + D F FG I S +A+D E G S+G+GFV+F + + A
Sbjct: 232 KANFTNVYVKNIDQDTTEEEFRDLFEKFGEITSATLARDAESGKSRGFGFVNFTSHDNAA 291
Query: 166 KSIEKVNGMLLNSKIVFVGKFIPRKEREKELG--------EKAKLF--TNVYIKNFGEDF 215
++E +N + ++VG+ + ERE+EL EKA + N+YIKN +D
Sbjct: 292 AAVEALNDKDFKGQKLYVGRAQKKHEREEELRKQYEAARIEKASKYQGVNLYIKNLSDDI 351
Query: 216 NDEKLKEMFEPYGTITSYRVM--------------------------------------N 237
+DEKL+E+F YGTITS +VM N
Sbjct: 352 DDEKLRELFSSYGTITSAKVMRDFAPESTSDSEKEAKKDSKEPETKEEEPKDEAGDNAEN 411
Query: 238 NDGK----------------SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKK 281
D K S+GFGFV + SP+ A KAV N + V GK LYV AQ+K
Sbjct: 412 KDNKENKAESKKSEKKPLGKSKGFGFVCFSSPDEASKAVTEMNQRMVHGKPLYVALAQRK 471
Query: 282 AERTQELK 289
R +L+
Sbjct: 472 DVRRSQLE 479
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 61/135 (45%), Gaps = 18/135 (13%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQ 261
++Y+ + L E+F G + S RV + +S G+ +V Y + E+A++
Sbjct: 55 ASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALE 114
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDER 321
N + G+ + +Q R L++ QG N+++KNLD +ID++
Sbjct: 115 DLNYTLIKGRPCRIMWSQ----RDPALRKTG-----------QG-NVFIKNLDTAIDNKA 158
Query: 322 LRKEFTPFGTITSAK 336
L F FG I S K
Sbjct: 159 LHDTFAAFGNILSCK 173
>gi|402870468|ref|XP_003899242.1| PREDICTED: LOW QUALITY PROTEIN: polyadenylate-binding protein
4-like [Papio anubis]
Length = 496
Score = 329 bits (844), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 160/264 (60%), Positives = 207/264 (78%), Gaps = 2/264 (0%)
Query: 74 MLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSA 133
+ D ++ALDTMNFD +KG+ IR+MWSQRD LR+SG+GNVFIKNLDKSIDNK +Y+ FS
Sbjct: 187 LTDAQKALDTMNFDIIKGKSIRLMWSQRDAYLRRSGIGNVFIKNLDKSIDNKTLYEHFSG 246
Query: 134 FGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKERE 193
FG ILS KV D+QG SKGY FVHF+ + AA+++IE++NG LL S VFVG+F RK+RE
Sbjct: 247 FGKILSSKVMSDDQG-SKGYAFVHFQNQSAADRAIEEMNGRLLKSCKVFVGRFKNRKDRE 305
Query: 194 KELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GKSRGFGFVAYES 252
EL KA FTN+YIKNFG D +DE+LK++F YG S +VM + GKS+GFGFV+++S
Sbjct: 306 AELRSKASEFTNIYIKNFGGDMDDERLKDVFSKYGKTLSVKVMTDSRGKSKGFGFVSFDS 365
Query: 253 PEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKN 312
E A+KAV+ NG++++G++++VGRAQKK ER ELK+ FE LK ER+ YQGV LYVKN
Sbjct: 366 HEAAKKAVEEMNGRDINGQLIFVGRAQKKVERQAELKQMFEQLKRERIRGYQGVKLYVKN 425
Query: 313 LDDSIDDERLRKEFTPFGTITSAK 336
LDD+IDDE+LR EF+ FG+I K
Sbjct: 426 LDDTIDDEKLRNEFSSFGSIIRVK 449
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 77/219 (35%), Positives = 125/219 (57%), Gaps = 16/219 (7%)
Query: 77 TERALDTMNFDALKGRPIRI----MWSQRDPSLRK--SGVGNVFIKNLDKSIDNKAMYDT 130
+RA++ MN LK + + R+ LR S N++IKN +D++ + D
Sbjct: 276 ADRAIEEMNGRLLKSCKVFVGRFKNRKDREAELRSKASEFTNIYIKNFGGDMDDERLKDV 335
Query: 131 FSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRK 190
FS +G LS KV D +G SKG+GFV F++ EAA K++E++NG +N +++FVG+ +
Sbjct: 336 FSKYGKTLSVKVMTDSRGKSKGFGFVSFDSHEAAKKAVEEMNGRDINGQLIFVGRAQKKV 395
Query: 191 EREKELG--------EKAKLFTNV--YIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDG 240
ER+ EL E+ + + V Y+KN + +DEKL+ F +G+I +VM +G
Sbjct: 396 ERQAELKQMFEQLKRERIRGYQGVKLYVKNLDDTIDDEKLRNEFSSFGSIIRVKVMQQEG 455
Query: 241 KSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQ 279
+S+GFGF+ + S E A KA+ NG+ + K + + AQ
Sbjct: 456 QSKGFGFICFSSLEDATKAMIEMNGRFLGSKPISIALAQ 494
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 119/228 (52%), Gaps = 17/228 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + ++ FSA G +LS ++ +D+ S GY +V+F A K++
Sbjct: 135 MASLYVGDLHADVTEDLLFRKFSAAGPVLSIRICRDQVTRRSLGYAYVNFLQLTDAQKAL 194
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N ++ GK I +++ + NV+IKN + +++ L E F +G
Sbjct: 195 DTMNFDIIK------GKSIRLMWSQRDAYLRRSGIGNVFIKNLDKSIDNKTLYEHFSGFG 248
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S +VM++D S+G+ FV +++ A++A++ NG+ + ++VGR + + +R EL
Sbjct: 249 KILSSKVMSDDQGSKGYAFVHFQNQSAADRAIEEMNGRLLKSCKVFVGRFKNRKDREAEL 308
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ + N+Y+KN +DDERL+ F+ +G S K
Sbjct: 309 RSKASEF----------TNIYIKNFGGDMDDERLKDVFSKYGKTLSVK 346
>gi|296815242|ref|XP_002847958.1| polyadenylate-binding protein [Arthroderma otae CBS 113480]
gi|238840983|gb|EEQ30645.1| polyadenylate-binding protein [Arthroderma otae CBS 113480]
Length = 708
Score = 329 bits (843), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 158/263 (60%), Positives = 201/263 (76%), Gaps = 2/263 (0%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D ERAL+ +N+ +KGRP RIMWSQRDP+LRK+G GNVFIKNLD +IDNKA++DTF+AFG
Sbjct: 39 DGERALEDLNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDTAIDNKALHDTFAAFG 98
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCKVAQDE GNSKGYGFVH+ET EAA +I+ VNGMLLN K VFVG I +K+R+ +
Sbjct: 99 NILSCKVAQDEYGNSKGYGFVHYETAEAATNAIKHVNGMLLNEKKVFVGHHIAKKDRQSK 158
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM--NNDGKSRGFGFVAYESP 253
E FTN+Y+KN +D DE+ + +FE YG ITS + N GKSRGFGFV +
Sbjct: 159 FEEMKANFTNIYVKNVEQDVTDEEFRALFEKYGDITSATLSRDNETGKSRGFGFVNFSDH 218
Query: 254 EFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNL 313
E A AV+ N E+ G+ LYVGRAQKK ER +EL++++E +IE+ ++YQGVNLY+KNL
Sbjct: 219 EAASAAVEGLNEYELKGQKLYVGRAQKKHEREEELRKQYEAARIEKASKYQGVNLYIKNL 278
Query: 314 DDSIDDERLRKEFTPFGTITSAK 336
D IDDE+LR+ F+ +G ITSAK
Sbjct: 279 SDDIDDEKLRELFSSYGNITSAK 301
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 109/211 (51%), Gaps = 18/211 (8%)
Query: 127 MYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGK 185
+Y+ FS+ G + S +V +D S GY +V++ +++E +N L+ + +
Sbjct: 2 LYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALEDLNYTLIKGRPCRI-M 60
Query: 186 FIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GKSRG 244
+ R ++ G+ NV+IKN +++ L + F +G I S +V ++ G S+G
Sbjct: 61 WSQRDPALRKTGQ-----GNVFIKNLDTAIDNKALHDTFAAFGNILSCKVAQDEYGNSKG 115
Query: 245 FGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQ 304
+GFV YE+ E A A++ NG ++ K ++VG K +R + +FE +K
Sbjct: 116 YGFVHYETAEAATNAIKHVNGMLLNEKKVFVGHHIAKKDR----QSKFEEMKANF----- 166
Query: 305 GVNLYVKNLDDSIDDERLRKEFTPFGTITSA 335
N+YVKN++ + DE R F +G ITSA
Sbjct: 167 -TNIYVKNVEQDVTDEEFRALFEKYGDITSA 196
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 33/50 (66%)
Query: 240 GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELK 289
GKS+GFGFV + +P+ A KAV N + V GK LYV AQ+K R +L+
Sbjct: 368 GKSKGFGFVCFSNPDEASKAVTEMNQRMVHGKPLYVALAQRKDVRKSQLE 417
>gi|47933430|gb|AAT39343.1| polyadenylate binding protein [Oikopleura dioica]
Length = 610
Score = 329 bits (843), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 162/276 (58%), Positives = 212/276 (76%), Gaps = 5/276 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD +KG+PIRIMWSQRDPSLR+SG GNVFIKNLD+SI
Sbjct: 44 GYAYVNFQQP--ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRRSGQGNVFIKNLDRSI 101
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFS+FG+ILSCKV D G SKG+GFVH+E++E+A ++IEKVNGML+ K VF
Sbjct: 102 DNKALYDTFSSFGNILSCKVVCDING-SKGFGFVHYESDESAQRAIEKVNGMLMEDKKVF 160
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND--G 240
V +F R +R +E G+ AK FTN+++KN + ++ + L + FE +G + S++V+ ++ G
Sbjct: 161 VARFKSRNDRMREFGDAAKHFTNLFVKNLPDSWDTDALLKNFEQFGEVVSHKVICDETTG 220
Query: 241 KSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERL 300
S+ GF++++ + AE AV+ + KE++GK LY GRAQKKAER+ ELK ++E +K ER+
Sbjct: 221 LSKCHGFISFKEHDQAEAAVEIMHEKEIEGKKLYCGRAQKKAERSSELKAKYEKIKQERI 280
Query: 301 NRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLYVKNLDDSIDDE LR+ F FG ITSAK
Sbjct: 281 QRYQGVNLYVKNLDDSIDDEGLREAFKQFGNITSAK 316
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 72/238 (30%), Positives = 111/238 (46%), Gaps = 57/238 (23%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQ-GNSKGYGFVHFETEEAANKSIEK 170
N+F+KNL S D A+ F FG ++S KV DE G SK +GF+ F+ + A ++E
Sbjct: 183 NLFVKNLPDSWDTDALLKNFEQFGEVVSHKVICDETTGLSKCHGFISFKEHDQAEAAVEI 242
Query: 171 VNGMLLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKL 220
++ + K ++ G+ + ER EL K + N+Y+KN + +DE L
Sbjct: 243 MHEKEIEGKKLYCGRAQKKAERSSELKAKYEKIKQERIQRYQGVNLYVKNLDDSIDDEGL 302
Query: 221 KEMFEPYGTITSYRVMNN------------------------------------------ 238
+E F+ +G ITS +V+ +
Sbjct: 303 REAFKQFGNITSAKVITDLNEKDEVGQAKSDQAPEEEGEAVEEKKTEDSEAAGDAPGPEK 362
Query: 239 ----DGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRF 292
G+S+GFGFV + SPE A KAV NG+ GK LYVG AQ+K +R L++++
Sbjct: 363 PVSKKGRSKGFGFVCFSSPEEATKAVTEMNGRIFGGKPLYVGLAQRKEDRKAHLQQQY 420
Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 118/228 (51%), Gaps = 17/228 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L I +YD F A G +LS +V +D S GY +V+F+ A +++
Sbjct: 1 MASLYVGDLHPDITEAMLYDKFQASGPVLSIRVCRDMVTRRSLGYAYVNFQQPADAERAL 60
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N ++ K + I +R+ L + NV+IKN +++ L + F +G
Sbjct: 61 DTMNFDVIKGKPI----RIMWSQRDPSLRRSGQ--GNVFIKNLDRSIDNKALYDTFSSFG 114
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S +V+ + S+GFGFV YES E A++A++ NG ++ K ++V R + + +R +E
Sbjct: 115 NILSCKVVCDINGSKGFGFVHYESDESAQRAIEKVNGMLMEDKKVFVARFKSRNDRMREF 174
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ NL+VKNL DS D + L K F FG + S K
Sbjct: 175 GDAAKHF----------TNLFVKNLPDSWDTDALLKNFEQFGEVVSHK 212
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 76/168 (45%), Gaps = 51/168 (30%)
Query: 106 RKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQD-------------------- 145
R GV N+++KNLD SID++ + + F FG+I S KV D
Sbjct: 282 RYQGV-NLYVKNLDDSIDDEGLREAFKQFGNITSAKVITDLNEKDEVGQAKSDQAPEEEG 340
Query: 146 -------------------------EQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKI 180
++G SKG+GFV F + E A K++ ++NG + K
Sbjct: 341 EAVEEKKTEDSEAAGDAPGPEKPVSKKGRSKGFGFVCFSSPEEATKAVTEMNGRIFGGKP 400
Query: 181 VFVGKFIPRKEREKELGEK--AKLFTNVYIKNFGEDFNDEKLKEMFEP 226
++VG +++R+ L ++ ++ T + ++ F ++ + + F+P
Sbjct: 401 LYVGLAQRKEDRKAHLQQQYMQRVSTGIRMQAF---MGNQVVNQNFQP 445
>gi|313219101|emb|CBY43303.1| unnamed protein product [Oikopleura dioica]
Length = 512
Score = 328 bits (842), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 163/276 (59%), Positives = 212/276 (76%), Gaps = 5/276 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD +KG+PIRIMWSQRDPSLR+SG GNVFIKNLD+SI
Sbjct: 44 GYAYVNFQQP--ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRRSGQGNVFIKNLDRSI 101
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFS+FG+ILSCKV D G SKG+GFVH+E++E+A ++IEKVNGML+ K VF
Sbjct: 102 DNKALYDTFSSFGNILSCKVVCDING-SKGFGFVHYESDESAQRAIEKVNGMLMEDKKVF 160
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND--G 240
V +F R +R +E G+ AK FTN+++KN + ++ + L E FE +G + S++V+ ++ G
Sbjct: 161 VARFKSRNDRMREFGDAAKHFTNLFVKNLPDSWDTDALLENFEQFGEVVSHKVICDETTG 220
Query: 241 KSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERL 300
S+ GF++++ + AE AV+ + KE++GK LY GRAQKKAER+ ELK ++E +K ER+
Sbjct: 221 LSKCHGFISFKEHDQAEAAVEIMHEKEIEGKKLYCGRAQKKAERSSELKAKYEKIKQERI 280
Query: 301 NRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLYVKNLDDSIDDE LR+ F FG ITSAK
Sbjct: 281 QRYQGVNLYVKNLDDSIDDEGLREAFKQFGNITSAK 316
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 72/193 (37%), Positives = 113/193 (58%), Gaps = 12/193 (6%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQ-GNSKGYGFVHFETEEAANKSIEK 170
N+F+KNL S D A+ + F FG ++S KV DE G SK +GF+ F+ + A ++E
Sbjct: 183 NLFVKNLPDSWDTDALLENFEQFGEVVSHKVICDETTGLSKCHGFISFKEHDQAEAAVEI 242
Query: 171 VNGMLLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKL 220
++ + K ++ G+ + ER EL K + N+Y+KN + +DE L
Sbjct: 243 MHEKEIEGKKLYCGRAQKKAERSSELKAKYEKIKQERIQRYQGVNLYVKNLDDSIDDEGL 302
Query: 221 KEMFEPYGTITSYRVMNN-DGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQ 279
+E F+ +G ITS +V+ + +G+S+GFGFV + SPE A KAV NG+ GK LYVG AQ
Sbjct: 303 REAFKQFGNITSAKVITDLNGRSKGFGFVCFSSPEEATKAVTEMNGRIFGGKPLYVGLAQ 362
Query: 280 KKAERTQELKRRF 292
+K +R L++++
Sbjct: 363 RKEDRKAHLQQQY 375
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 118/228 (51%), Gaps = 17/228 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L I +YD F A G +LS +V +D S GY +V+F+ A +++
Sbjct: 1 MASLYVGDLHPDITEAMLYDKFQASGPVLSIRVCRDMVTRRSLGYAYVNFQQPADAERAL 60
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N ++ K + I +R+ L + NV+IKN +++ L + F +G
Sbjct: 61 DTMNFDVIKGKPI----RIMWSQRDPSLRRSGQ--GNVFIKNLDRSIDNKALYDTFSSFG 114
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S +V+ + S+GFGFV YES E A++A++ NG ++ K ++V R + + +R +E
Sbjct: 115 NILSCKVVCDINGSKGFGFVHYESDESAQRAIEKVNGMLMEDKKVFVARFKSRNDRMREF 174
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ NL+VKNL DS D + L + F FG + S K
Sbjct: 175 GDAAKHF----------TNLFVKNLPDSWDTDALLENFEQFGEVVSHK 212
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 74/123 (60%), Gaps = 6/123 (4%)
Query: 106 RKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAAN 165
R GV N+++KNLD SID++ + + F FG+I S KV D G SKG+GFV F + E A
Sbjct: 282 RYQGV-NLYVKNLDDSIDDEGLREAFKQFGNITSAKVITDLNGRSKGFGFVCFSSPEEAT 340
Query: 166 KSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEK--AKLFTNVYIKNFGEDFNDEKLKEM 223
K++ ++NG + K ++VG +++R+ L ++ ++ T + ++ F ++ + +
Sbjct: 341 KAVTEMNGRIFGGKPLYVGLAQRKEDRKAHLQQQYMQRVSTGIRMQAF---MGNQVVNQN 397
Query: 224 FEP 226
F+P
Sbjct: 398 FQP 400
>gi|116202083|ref|XP_001226853.1| hypothetical protein CHGG_08926 [Chaetomium globosum CBS 148.51]
gi|121932498|sp|Q2GSX8.1|PABP_CHAGB RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|88177444|gb|EAQ84912.1| hypothetical protein CHGG_08926 [Chaetomium globosum CBS 148.51]
Length = 783
Score = 328 bits (842), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 154/262 (58%), Positives = 206/262 (78%), Gaps = 1/262 (0%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D E+AL+ +N+ +KGRP RIMWSQRDP+LRK+G GNVFIKNLD +IDNKA++DTF+AFG
Sbjct: 118 DGEKALEELNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDVAIDNKALHDTFAAFG 177
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCKVAQDE GNSKGYGFVH+ET+EAA ++I+ VN MLLN K V+VG IP+K+R+ +
Sbjct: 178 NILSCKVAQDENGNSKGYGFVHYETDEAAAQAIKHVNNMLLNEKKVYVGYHIPKKDRQSK 237
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPE 254
E FTN+Y+KN + DE+ +++F YG +TS + +++GKSRGFGFV + + E
Sbjct: 238 FEEMKANFTNIYVKNISLEATDEEFRDLFAKYGDVTSSSLARDSEGKSRGFGFVNFTTHE 297
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A KAV+ NGKE G+ LYVGRAQKK ER +EL++ +E ++E+ N+YQGVNLY+KNL
Sbjct: 298 CAAKAVEELNGKEFRGQDLYVGRAQKKHEREEELRKSYEAARLEKANKYQGVNLYIKNLA 357
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
D IDD++LR+ F+ +G ITSAK
Sbjct: 358 DDIDDDKLRQMFSEYGPITSAK 379
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/239 (31%), Positives = 121/239 (50%), Gaps = 56/239 (23%)
Query: 107 KSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANK 166
K+ N+++KN+ ++ D F+ +G + S +A+D +G S+G+GFV+F T E A K
Sbjct: 242 KANFTNIYVKNISLEATDEEFRDLFAKYGDVTSSSLARDSEGKSRGFGFVNFTTHECAAK 301
Query: 167 SIEKVNGMLLNSKIVFVGKFIPRKEREKELG--------EKAKLF--TNVYIKNFGEDFN 216
++E++NG + ++VG+ + ERE+EL EKA + N+YIKN +D +
Sbjct: 302 AVEELNGKEFRGQDLYVGRAQKKHEREEELRKSYEAARLEKANKYQGVNLYIKNLADDID 361
Query: 217 DEKLKEMFEPYGTITSYRVMNND------------------------------------- 239
D+KL++MF YG ITS +VM +
Sbjct: 362 DDKLRQMFSEYGPITSAKVMRDAVTEGSAEEETEGKDKENKKEGEQAAEAEGEAEGAEKK 421
Query: 240 ---------GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELK 289
GKS+GFGFV + +P+ A KAV N + ++GK LYV AQ+K R +L+
Sbjct: 422 TEKKGDRRLGKSKGFGFVCFSNPDDATKAVAEMNQRMIEGKPLYVALAQRKDVRKNQLE 480
Score = 45.8 bits (107), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 62/135 (45%), Gaps = 18/135 (13%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQ 261
++Y+ + L E+F G++ S RV + +S G+ +V Y S EKA++
Sbjct: 65 ASLYVGELDPSVTEAMLFELFSQIGSVASIRVCRDTITRRSLGYAYVNYNSTSDGEKALE 124
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDER 321
N + G+ + +Q R L++ QG N+++KNLD +ID++
Sbjct: 125 ELNYTLIKGRPCRIMWSQ----RDPALRKTG-----------QG-NVFIKNLDVAIDNKA 168
Query: 322 LRKEFTPFGTITSAK 336
L F FG I S K
Sbjct: 169 LHDTFAAFGNILSCK 183
>gi|291084655|ref|NP_001108206.2| polyadenylate-binding protein 4-like [Homo sapiens]
Length = 428
Score = 328 bits (842), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 159/264 (60%), Positives = 208/264 (78%), Gaps = 2/264 (0%)
Query: 74 MLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSA 133
+ D ++ALDTMNFD +KG+ IR+MWSQRD LR+SG+GNVFIKNLDKSIDNK +Y+ FSA
Sbjct: 119 LADAQKALDTMNFDIIKGKSIRLMWSQRDAYLRRSGIGNVFIKNLDKSIDNKTLYEHFSA 178
Query: 134 FGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKERE 193
FG ILS KV D+QG SKGY FVHF+ + AA+++IE++NG LL VFVG+F RK+RE
Sbjct: 179 FGKILSSKVMSDDQG-SKGYAFVHFQNQSAADRAIEEMNGKLLKGCKVFVGRFKNRKDRE 237
Query: 194 KELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYES 252
EL KA FTNVYIKNFG D +DE+LK++F YG S +VM ++ GKS+GFGFV+++S
Sbjct: 238 AELRSKASEFTNVYIKNFGGDMDDERLKDVFSKYGKTLSVKVMTDSSGKSKGFGFVSFDS 297
Query: 253 PEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKN 312
E A+KAV+ NG++++G++++VGRAQKK ER ELK+ FE LK ER+ QGV LY+KN
Sbjct: 298 HEAAKKAVEEMNGRDINGQLIFVGRAQKKVERQAELKQMFEQLKRERIRGCQGVKLYIKN 357
Query: 313 LDDSIDDERLRKEFTPFGTITSAK 336
LDD+IDDE+LR EF+ FG+I+ K
Sbjct: 358 LDDTIDDEKLRNEFSSFGSISRVK 381
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 79/220 (35%), Positives = 125/220 (56%), Gaps = 16/220 (7%)
Query: 77 TERALDTMNFDALKGRPIRI----MWSQRDPSLRK--SGVGNVFIKNLDKSIDNKAMYDT 130
+RA++ MN LKG + + R+ LR S NV+IKN +D++ + D
Sbjct: 208 ADRAIEEMNGKLLKGCKVFVGRFKNRKDREAELRSKASEFTNVYIKNFGGDMDDERLKDV 267
Query: 131 FSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRK 190
FS +G LS KV D G SKG+GFV F++ EAA K++E++NG +N +++FVG+ +
Sbjct: 268 FSKYGKTLSVKVMTDSSGKSKGFGFVSFDSHEAAKKAVEEMNGRDINGQLIFVGRAQKKV 327
Query: 191 EREKELGEKAKLF----------TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDG 240
ER+ EL + + +YIKN + +DEKL+ F +G+I+ +VM +G
Sbjct: 328 ERQAELKQMFEQLKRERIRGCQGVKLYIKNLDDTIDDEKLRNEFSSFGSISRVKVMQEEG 387
Query: 241 KSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
+S+GFG + + SPE A KA+ NG+ + K L + AQ+
Sbjct: 388 QSKGFGLICFSSPEDATKAMTEMNGRILGSKPLSIALAQR 427
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 119/228 (52%), Gaps = 17/228 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + ++ FS G +LS ++ +D+ S GY +V+F A K++
Sbjct: 67 MASLYVGDLHADVTEDLLFRKFSTVGPVLSIRICRDQVTRRSLGYAYVNFLQLADAQKAL 126
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N ++ GK I +++ + NV+IKN + +++ L E F +G
Sbjct: 127 DTMNFDIIK------GKSIRLMWSQRDAYLRRSGIGNVFIKNLDKSIDNKTLYEHFSAFG 180
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S +VM++D S+G+ FV +++ A++A++ NGK + G ++VGR + + +R EL
Sbjct: 181 KILSSKVMSDDQGSKGYAFVHFQNQSAADRAIEEMNGKLLKGCKVFVGRFKNRKDREAEL 240
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ + N+Y+KN +DDERL+ F+ +G S K
Sbjct: 241 RSKASEF----------TNVYIKNFGGDMDDERLKDVFSKYGKTLSVK 278
>gi|344277245|ref|XP_003410413.1| PREDICTED: LOW QUALITY PROTEIN: polyadenylate-binding protein
4-like [Loxodonta africana]
Length = 602
Score = 328 bits (841), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 159/265 (60%), Positives = 207/265 (78%), Gaps = 2/265 (0%)
Query: 73 YMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFS 132
++ D ++ALDTMNFD +KG+ IR+MWSQRD LRKSG+GNVFIKNLDKSIDNK +Y+ FS
Sbjct: 253 HVADAQKALDTMNFDVIKGKSIRLMWSQRDAYLRKSGIGNVFIKNLDKSIDNKTLYEHFS 312
Query: 133 AFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKER 192
FG ILS KV D+QG SKGY FVHF+ + AA+++IE++NG LL + VFV +F RK+R
Sbjct: 313 TFGKILSSKVMSDDQG-SKGYAFVHFQNQSAADRAIEEMNGTLLKNCRVFVSRFKSRKDR 371
Query: 193 EKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYE 251
E EL KA FTNVYIKNFG+D +D +LKE+F YGT S +VM ++ GKS+GFGFV++
Sbjct: 372 ESELKNKASEFTNVYIKNFGDDMDDMRLKEVFSKYGTTLSVKVMTDSSGKSKGFGFVSFA 431
Query: 252 SPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVK 311
S E A+ AV+ NGK+++G++++VGRAQKK ER ELK+ FE L+ ER R +GV LY+K
Sbjct: 432 SHEAAKNAVEEMNGKDINGQLIFVGRAQKKIERQAELKQMFEQLRQERFRRCRGVKLYIK 491
Query: 312 NLDDSIDDERLRKEFTPFGTITSAK 336
NLDD+IDDE+LRKEF FG+I+ K
Sbjct: 492 NLDDTIDDEKLRKEFASFGSISRVK 516
Score = 130 bits (328), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 79/226 (34%), Positives = 128/226 (56%), Gaps = 20/226 (8%)
Query: 77 TERALDTMNFDALKGRPIRIMWSQ------RDPSLRK--SGVGNVFIKNLDKSIDNKAMY 128
+RA++ MN LK R+ S+ R+ L+ S NV+IKN +D+ +
Sbjct: 343 ADRAIEEMNGTLLKN--CRVFVSRFKSRKDRESELKNKASEFTNVYIKNFGDDMDDMRLK 400
Query: 129 DTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIP 188
+ FS +G+ LS KV D G SKG+GFV F + EAA ++E++NG +N +++FVG+
Sbjct: 401 EVFSKYGTTLSVKVMTDSSGKSKGFGFVSFASHEAAKNAVEEMNGKDINGQLIFVGRAQK 460
Query: 189 RKEREKELGE-----KAKLF-----TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN 238
+ ER+ EL + + + F +YIKN + +DEKL++ F +G+I+ +VM
Sbjct: 461 KIERQAELKQMFEQLRQERFRRCRGVKLYIKNLDDTIDDEKLRKEFASFGSISRVKVMQE 520
Query: 239 DGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAER 284
+G+S+GFG + + S E A KA+ NG+ + K L + AQ+ ER
Sbjct: 521 EGRSKGFGLICFSSHEEAIKAMTEMNGRILGSKPLNIALAQRNEER 566
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 117/228 (51%), Gaps = 17/228 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQD-EQGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + ++ FS G +LS ++ +D S GY +V+F A K++
Sbjct: 202 MASLYVGDLHADVTEDLLFKKFSTVGPVLSIRICRDLVTRRSLGYAYVNFLHVADAQKAL 261
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N ++ GK I +++ + NV+IKN + +++ L E F +G
Sbjct: 262 DTMNFDVIK------GKSIRLMWSQRDAYLRKSGIGNVFIKNLDKSIDNKTLYEHFSTFG 315
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S +VM++D S+G+ FV +++ A++A++ NG + ++V R + + +R EL
Sbjct: 316 KILSSKVMSDDQGSKGYAFVHFQNQSAADRAIEEMNGTLLKNCRVFVSRFKSRKDRESEL 375
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
K + N+Y+KN D +DD RL++ F+ +GT S K
Sbjct: 376 KNKASEF----------TNVYIKNFGDDMDDMRLKEVFSKYGTTLSVK 413
>gi|346974495|gb|EGY17947.1| polyadenylate-binding protein [Verticillium dahliae VdLs.17]
Length = 759
Score = 328 bits (841), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 153/262 (58%), Positives = 204/262 (77%), Gaps = 1/262 (0%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D E+AL+ +N+ + GRP RIMWSQRDP+LRK+G GNVFIKNLD +IDNKA++DTF+AFG
Sbjct: 114 DGEKALEELNYTVINGRPCRIMWSQRDPALRKNGQGNVFIKNLDVAIDNKALHDTFAAFG 173
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCKVAQDE GNSKGYGFVH+ET+EAA ++I+ VNGMLLN K V+VG IP+K+R+ +
Sbjct: 174 NILSCKVAQDEHGNSKGYGFVHYETDEAAAQAIKHVNGMLLNEKKVYVGHHIPKKDRQSK 233
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPE 254
E FTNVY+KN + +D++ +++F YG +TS + + +GKSRGFGFV + + E
Sbjct: 234 FEEMKANFTNVYVKNINSEASDDEFRDLFTKYGEVTSSSLARDQEGKSRGFGFVNFTTHE 293
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A +AV+ NGK+ G+ LYVGRAQKK ER +EL++ +E + E+ N+YQGVNLY+KNL
Sbjct: 294 AASQAVEELNGKDFRGQDLYVGRAQKKHEREEELRKSYEAARQEKANKYQGVNLYIKNLS 353
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
D +DDE+LR F+ FG ITSAK
Sbjct: 354 DDVDDEKLRAMFSEFGPITSAK 375
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 79/252 (31%), Positives = 126/252 (50%), Gaps = 58/252 (23%)
Query: 107 KSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANK 166
K+ NV++KN++ + D F+ +G + S +A+D++G S+G+GFV+F T EAA++
Sbjct: 238 KANFTNVYVKNINSEASDDEFRDLFTKYGEVTSSSLARDQEGKSRGFGFVNFTTHEAASQ 297
Query: 167 SIEKVNGMLLNSKIVFVGKFIPRKEREKEL--------GEKAKLF--TNVYIKNFGEDFN 216
++E++NG + ++VG+ + ERE+EL EKA + N+YIKN +D +
Sbjct: 298 AVEELNGKDFRGQDLYVGRAQKKHEREEELRKSYEAARQEKANKYQGVNLYIKNLSDDVD 357
Query: 217 DEKLKEMFEPYGTITSYRVMNND------------------------------------- 239
DEKL+ MF +G ITS +VM +
Sbjct: 358 DEKLRAMFSEFGPITSAKVMRDSISEGEDEEKAEEETPAPEAEVKKEDSEADADSQEAAD 417
Query: 240 -----------GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
GKS+GFGFV + +PE A KAV N + +D K LYV AQ+K R +L
Sbjct: 418 KKDAKKGDKKLGKSKGFGFVCFSNPEDATKAVADMNQRMIDNKPLYVALAQRKDVRKNQL 477
Query: 289 KRRFEMLKIERL 300
++ + R+
Sbjct: 478 EQSIQARNQMRM 489
Score = 44.7 bits (104), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 62/135 (45%), Gaps = 18/135 (13%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQ 261
++Y+ + L E+F G + S RV + +S G+ +V Y + EKA++
Sbjct: 61 ASLYVGELEPQVTEAMLFELFSHIGPVASIRVCRDAVTRRSLGYAYVNYNTTSDGEKALE 120
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDER 321
N ++G+ + +Q R L++ QG N+++KNLD +ID++
Sbjct: 121 ELNYTVINGRPCRIMWSQ----RDPALRKNG-----------QG-NVFIKNLDVAIDNKA 164
Query: 322 LRKEFTPFGTITSAK 336
L F FG I S K
Sbjct: 165 LHDTFAAFGNILSCK 179
>gi|313229163|emb|CBY23748.1| unnamed protein product [Oikopleura dioica]
Length = 570
Score = 328 bits (841), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 162/276 (58%), Positives = 212/276 (76%), Gaps = 5/276 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD +KG+PIRIMWSQRDPSLR+SG GNVFIKNLD+SI
Sbjct: 44 GYAYVNFQQP--ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRRSGQGNVFIKNLDRSI 101
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFS+FG+ILSCKV D G SKG+GFVH+E++E+A ++IEKVNGML+ K VF
Sbjct: 102 DNKALYDTFSSFGNILSCKVVCDING-SKGFGFVHYESDESAQRAIEKVNGMLMEDKKVF 160
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND--G 240
V +F R +R +E G+ AK FTN+++KN + ++ + L + FE +G + S++V+ ++ G
Sbjct: 161 VARFKSRNDRMREFGDAAKHFTNLFVKNLPDSWDTDALLKNFEQFGEVVSHKVICDETTG 220
Query: 241 KSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERL 300
S+ GF++++ + AE AV+ + KE++GK LY GRAQKKAER+ ELK ++E +K ER+
Sbjct: 221 LSKCHGFISFKEHDQAEAAVEIMHEKEIEGKKLYCGRAQKKAERSSELKAKYEKIKQERI 280
Query: 301 NRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLYVKNLDDSIDDE LR+ F FG ITSAK
Sbjct: 281 QRYQGVNLYVKNLDDSIDDEGLREAFKQFGNITSAK 316
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 72/193 (37%), Positives = 112/193 (58%), Gaps = 12/193 (6%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQ-GNSKGYGFVHFETEEAANKSIEK 170
N+F+KNL S D A+ F FG ++S KV DE G SK +GF+ F+ + A ++E
Sbjct: 183 NLFVKNLPDSWDTDALLKNFEQFGEVVSHKVICDETTGLSKCHGFISFKEHDQAEAAVEI 242
Query: 171 VNGMLLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKL 220
++ + K ++ G+ + ER EL K + N+Y+KN + +DE L
Sbjct: 243 MHEKEIEGKKLYCGRAQKKAERSSELKAKYEKIKQERIQRYQGVNLYVKNLDDSIDDEGL 302
Query: 221 KEMFEPYGTITSYRVMNN-DGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQ 279
+E F+ +G ITS +V+ + +G+S+GFGFV + SPE A KAV NG+ GK LYVG AQ
Sbjct: 303 REAFKQFGNITSAKVITDLNGRSKGFGFVCFSSPEEATKAVTEMNGRIFGGKPLYVGLAQ 362
Query: 280 KKAERTQELKRRF 292
+K +R L++++
Sbjct: 363 RKEDRKAHLQQQY 375
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 118/228 (51%), Gaps = 17/228 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L I +YD F A G +LS +V +D S GY +V+F+ A +++
Sbjct: 1 MASLYVGDLHPDITEAMLYDKFQASGPVLSIRVCRDMVTRRSLGYAYVNFQQPADAERAL 60
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N ++ K + I +R+ L + NV+IKN +++ L + F +G
Sbjct: 61 DTMNFDVIKGKPI----RIMWSQRDPSLRRSGQ--GNVFIKNLDRSIDNKALYDTFSSFG 114
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S +V+ + S+GFGFV YES E A++A++ NG ++ K ++V R + + +R +E
Sbjct: 115 NILSCKVVCDINGSKGFGFVHYESDESAQRAIEKVNGMLMEDKKVFVARFKSRNDRMREF 174
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ NL+VKNL DS D + L K F FG + S K
Sbjct: 175 GDAAKHF----------TNLFVKNLPDSWDTDALLKNFEQFGEVVSHK 212
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 74/123 (60%), Gaps = 6/123 (4%)
Query: 106 RKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAAN 165
R GV N+++KNLD SID++ + + F FG+I S KV D G SKG+GFV F + E A
Sbjct: 282 RYQGV-NLYVKNLDDSIDDEGLREAFKQFGNITSAKVITDLNGRSKGFGFVCFSSPEEAT 340
Query: 166 KSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEK--AKLFTNVYIKNFGEDFNDEKLKEM 223
K++ ++NG + K ++VG +++R+ L ++ ++ T + ++ F ++ + +
Sbjct: 341 KAVTEMNGRIFGGKPLYVGLAQRKEDRKAHLQQQYMQRVSTGIRMQAF---MGNQVVNQN 397
Query: 224 FEP 226
F+P
Sbjct: 398 FQP 400
>gi|452843390|gb|EME45325.1| hypothetical protein DOTSEDRAFT_71152 [Dothistroma septosporum
NZE10]
Length = 785
Score = 328 bits (841), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 158/262 (60%), Positives = 200/262 (76%), Gaps = 1/262 (0%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D ERAL+ +N+ +KG+P RIMWSQRDP+LRK+G GNVFIKNLD +IDNKA++DTF+AFG
Sbjct: 109 DGERALEELNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDGAIDNKALHDTFAAFG 168
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCKVAQDE GNSKGYGFVH+ET EAAN +I+ VNGMLLN K VFVG IP+K+R +
Sbjct: 169 NILSCKVAQDEHGNSKGYGFVHYETAEAANSAIKSVNGMLLNEKKVFVGHHIPKKDRMSK 228
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGKSRGFGFVAYESPE 254
E FTN+Y+KN + D++ + +FE YG ITS + ++ +GKSRGFGFV Y E
Sbjct: 229 FEEMKANFTNIYVKNIDPEATDDEFRALFEKYGDITSASLAHDQEGKSRGFGFVNYIRHE 288
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A KAV+ N + G+ LYVGRAQKK ER +EL++++E + E+ +YQGVNLYVKNL
Sbjct: 289 DANKAVEELNNSDFKGQALYVGRAQKKHEREEELRKQYEAQRQEKSAKYQGVNLYVKNLA 348
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
D IDD+ LRK F P+G ITSAK
Sbjct: 349 DEIDDDELRKIFEPYGAITSAK 370
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 85/140 (60%), Gaps = 10/140 (7%)
Query: 107 KSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANK 166
K+ N+++KN+D + F +G I S +A D++G S+G+GFV++ E ANK
Sbjct: 233 KANFTNIYVKNIDPEATDDEFRALFEKYGDITSASLAHDQEGKSRGFGFVNYIRHEDANK 292
Query: 167 SIEKVNGMLLNSKIVFVGKFIPRKEREKEL--------GEKAKLF--TNVYIKNFGEDFN 216
++E++N + ++VG+ + ERE+EL EK+ + N+Y+KN ++ +
Sbjct: 293 AVEELNNSDFKGQALYVGRAQKKHEREEELRKQYEAQRQEKSAKYQGVNLYVKNLADEID 352
Query: 217 DEKLKEMFEPYGTITSYRVM 236
D++L+++FEPYG ITS +VM
Sbjct: 353 DDELRKIFEPYGAITSAKVM 372
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 107/244 (43%), Gaps = 48/244 (19%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQ----RDPSLRKS-------------GVGNVFIKNL 118
D +A++ +N KG+ + + +Q R+ LRK GV N+++KNL
Sbjct: 289 DANKAVEELNNSDFKGQALYVGRAQKKHEREEELRKQYEAQRQEKSAKYQGV-NLYVKNL 347
Query: 119 DKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNS 178
ID+ + F +G+I S KV +D E AA+K E+
Sbjct: 348 ADEIDDDELRKIFEPYGAITSAKVMRD----------TIPADEVAASKKDEE-------- 389
Query: 179 KIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN 238
+ + EK+ ++ K + KN + + ++++ + TIT
Sbjct: 390 ----------KSDEEKQSDDEEK--KDEGDKNEEGEKKEGDVEDVIKKLDTITIGGEKKI 437
Query: 239 DGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIE 298
GKS+GFGFV + +P+ A KAV N K + GK LYV AQ+K R +L+ +
Sbjct: 438 LGKSKGFGFVCFSNPDEATKAVTELNQKMIHGKPLYVALAQRKEVRKSQLEASIQARNQV 497
Query: 299 RLNR 302
R+ +
Sbjct: 498 RMQQ 501
Score = 45.4 bits (106), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 61/135 (45%), Gaps = 18/135 (13%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQ 261
++Y+ + L E+F G + S RV + +S G+ +V Y S E+A++
Sbjct: 56 ASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNSANDGERALE 115
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDER 321
N + GK + +Q R L++ QG N+++KNLD +ID++
Sbjct: 116 ELNYTLIKGKPCRIMWSQ----RDPALRKTG-----------QG-NVFIKNLDGAIDNKA 159
Query: 322 LRKEFTPFGTITSAK 336
L F FG I S K
Sbjct: 160 LHDTFAAFGNILSCK 174
>gi|429859146|gb|ELA33937.1| polyadenylate-binding protein [Colletotrichum gloeosporioides Nara
gc5]
Length = 688
Score = 328 bits (840), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 153/259 (59%), Positives = 202/259 (77%), Gaps = 1/259 (0%)
Query: 79 RALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSIL 138
RAL+ +N+ +KGRP RIMWSQRDP+LRK+G GNVFIKNLD +IDNKA++DTF+AFG+IL
Sbjct: 90 RALEELNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDVAIDNKALHDTFAAFGNIL 149
Query: 139 SCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGE 198
SCKVAQDE GNSKGYGFVH+ET+EAA ++I+ VNGMLLN K V+VG IP+K+R+ + E
Sbjct: 150 SCKVAQDENGNSKGYGFVHYETDEAAAQAIKHVNGMLLNEKKVYVGHHIPKKDRQSKFEE 209
Query: 199 KAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPEFAE 257
FTNVY+KN + D++ +++F +G +TS + + +GKSRGFGFV + + E A
Sbjct: 210 MKANFTNVYVKNIANEVTDDEFRDLFAAFGDVTSSSLARDQEGKSRGFGFVNFTTHEAAA 269
Query: 258 KAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSI 317
KAV+ N K+ G+ LYVGRAQKK ER +EL++ +E ++E+ N+YQGVNLY+KNLDD +
Sbjct: 270 KAVEDLNNKDFRGQDLYVGRAQKKHEREEELRKSYEAARLEKANKYQGVNLYIKNLDDEV 329
Query: 318 DDERLRKEFTPFGTITSAK 336
DDE+LR F FG ITSAK
Sbjct: 330 DDEKLRTLFADFGPITSAK 348
Score = 124 bits (310), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 78/242 (32%), Positives = 121/242 (50%), Gaps = 55/242 (22%)
Query: 107 KSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANK 166
K+ NV++KN+ + + D F+AFG + S +A+D++G S+G+GFV+F T EAA K
Sbjct: 211 KANFTNVYVKNIANEVTDDEFRDLFAAFGDVTSSSLARDQEGKSRGFGFVNFTTHEAAAK 270
Query: 167 SIEKVNGMLLNSKIVFVGKFIPRKEREKELG--------EKAKLF--TNVYIKNFGEDFN 216
++E +N + ++VG+ + ERE+EL EKA + N+YIKN ++ +
Sbjct: 271 AVEDLNNKDFRGQDLYVGRAQKKHEREEELRKSYEAARLEKANKYQGVNLYIKNLDDEVD 330
Query: 217 DEKLKEMFEPYGTITSYRVMNN-------------------------------------- 238
DEKL+ +F +G ITS +VM +
Sbjct: 331 DEKLRTLFADFGPITSAKVMRDTPTDSKEDEEGSSEEKEKENKPEAEEKTEEKEGSEKKE 390
Query: 239 -------DGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRR 291
GKS+GFGFV + +P+ A KAV N + V GK LYV AQ+K R +L+
Sbjct: 391 KKSDKKLHGKSKGFGFVCFSNPDDATKAVAEMNQRMVHGKPLYVALAQRKDVRKSQLEAS 450
Query: 292 FE 293
+
Sbjct: 451 IQ 452
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 68/166 (40%), Gaps = 62/166 (37%)
Query: 79 RALDTMNFDALKGRPIRIMWSQ----RDPSLRKS-------------GVGNVFIKNLDKS 121
+A++ +N +G+ + + +Q R+ LRKS GV N++IKNLD
Sbjct: 270 KAVEDLNNKDFRGQDLYVGRAQKKHEREEELRKSYEAARLEKANKYQGV-NLYIKNLDDE 328
Query: 122 IDNKAMYDTFSAFGSILSCKVAQDE----------------------------------- 146
+D++ + F+ FG I S KV +D
Sbjct: 329 VDDEKLRTLFADFGPITSAKVMRDTPTDSKEDEEGSSEEKEKENKPEAEEKTEEKEGSEK 388
Query: 147 ---------QGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFV 183
G SKG+GFV F + A K++ ++N +++ K ++V
Sbjct: 389 KEKKSDKKLHGKSKGFGFVCFSNPDDATKAVAEMNQRMVHGKPLYV 434
>gi|258565691|ref|XP_002583590.1| polyadenylate-binding protein [Uncinocarpus reesii 1704]
gi|237907291|gb|EEP81692.1| polyadenylate-binding protein [Uncinocarpus reesii 1704]
Length = 765
Score = 328 bits (840), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 159/263 (60%), Positives = 201/263 (76%), Gaps = 2/263 (0%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D ERAL+ +N+ +KGRP RIMWSQRDP+LRK+G GNVFIKNLD +IDNKA++DTF+AFG
Sbjct: 107 DGERALEDLNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDTAIDNKALHDTFAAFG 166
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCKVAQDE GNSKGYGFVH+ET EAA +I+ VNGMLLN K VFVG I +K+R+ +
Sbjct: 167 NILSCKVAQDEFGNSKGYGFVHYETAEAAQNAIKHVNGMLLNDKKVFVGHHIAKKDRQSK 226
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESP 253
E FTNVY+KN +D DE+ +E+FE +G ITS + + GKSRGFGFV + S
Sbjct: 227 FEEMKANFTNVYVKNIDQDTTDEEFRELFEKFGEITSATLARDSESGKSRGFGFVNFTSH 286
Query: 254 EFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNL 313
E A AV N K+ + LYVGRAQKK ER +EL++++E +IE+ ++YQGVNLY+KNL
Sbjct: 287 ESAAAAVDNLNEKDFKSQKLYVGRAQKKHEREEELRKQYEAARIEKASKYQGVNLYIKNL 346
Query: 314 DDSIDDERLRKEFTPFGTITSAK 336
D IDDE+LR F+ +GTITSAK
Sbjct: 347 SDDIDDEKLRDLFSGYGTITSAK 369
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 79/248 (31%), Positives = 121/248 (48%), Gaps = 65/248 (26%)
Query: 107 KSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQD-EQGNSKGYGFVHFETEEAAN 165
K+ NV++KN+D+ ++ + F FG I S +A+D E G S+G+GFV+F + E+A
Sbjct: 231 KANFTNVYVKNIDQDTTDEEFRELFEKFGEITSATLARDSESGKSRGFGFVNFTSHESAA 290
Query: 166 KSIEKVNGMLLNSKIVFVGKFIPRKEREKELG--------EKAKLF--TNVYIKNFGEDF 215
+++ +N S+ ++VG+ + ERE+EL EKA + N+YIKN +D
Sbjct: 291 AAVDNLNEKDFKSQKLYVGRAQKKHEREEELRKQYEAARIEKASKYQGVNLYIKNLSDDI 350
Query: 216 NDEKLKEMFEPYGTITSYRVMNN------------DGKSRG------------------- 244
+DEKL+++F YGTITS +VM + + KS G
Sbjct: 351 DDEKLRDLFSGYGTITSAKVMRDNLAAESSSDSEKEAKSEGKENEPPEESKDEAAEKAET 410
Query: 245 -----------------------FGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKK 281
FGFV + SP+ A KAV N + V+GK LYV AQ+K
Sbjct: 411 KDTKEAKTESKKADKKLLGKSKGFGFVCFSSPDEASKAVTEMNQRMVNGKPLYVALAQRK 470
Query: 282 AERTQELK 289
R +L+
Sbjct: 471 DVRRSQLE 478
Score = 42.7 bits (99), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 61/135 (45%), Gaps = 18/135 (13%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQ 261
++Y+ + L E+F G + S RV + +S G+ +V Y + E+A++
Sbjct: 54 ASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALE 113
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDER 321
N + G+ + +Q R L++ QG N+++KNLD +ID++
Sbjct: 114 DLNYTLIKGRPCRIMWSQ----RDPALRKTG-----------QG-NVFIKNLDTAIDNKA 157
Query: 322 LRKEFTPFGTITSAK 336
L F FG I S K
Sbjct: 158 LHDTFAAFGNILSCK 172
>gi|332820240|ref|XP_526690.3| PREDICTED: polyadenylate-binding protein 4-like [Pan troglodytes]
Length = 428
Score = 328 bits (840), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 158/264 (59%), Positives = 208/264 (78%), Gaps = 2/264 (0%)
Query: 74 MLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSA 133
+ D ++ALDTMNFD +KG+ IR+MWSQRD LR+SG+GNVFIKNLDKSIDNK +Y+ FSA
Sbjct: 119 LADAQKALDTMNFDIIKGKSIRLMWSQRDAYLRRSGIGNVFIKNLDKSIDNKTLYEHFSA 178
Query: 134 FGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKERE 193
FG ILS KV D+QG SKGY FVHF+ + AA+++IE++NG LL VFVG+F RK+RE
Sbjct: 179 FGKILSSKVMSDDQG-SKGYAFVHFQNQSAADRAIEEMNGKLLKGCKVFVGRFKNRKDRE 237
Query: 194 KELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYES 252
EL KA FTN+YIKNFG D +DE+LK++F YG S +VM ++ GKS+GFGFV+++S
Sbjct: 238 AELRSKASEFTNIYIKNFGGDMDDERLKDVFSKYGKTLSVKVMTDSSGKSKGFGFVSFDS 297
Query: 253 PEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKN 312
E A+KAV+ NG++++G++++VGRAQKK ER ELK+ FE LK ER+ QGV LY+KN
Sbjct: 298 HEAAKKAVEEMNGRDINGQLIFVGRAQKKVERQAELKQMFEQLKRERIRGCQGVKLYIKN 357
Query: 313 LDDSIDDERLRKEFTPFGTITSAK 336
LDD+IDDE+LR EF+ FG+I+ K
Sbjct: 358 LDDTIDDEKLRNEFSSFGSISRVK 381
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 78/220 (35%), Positives = 125/220 (56%), Gaps = 16/220 (7%)
Query: 77 TERALDTMNFDALKGRPIRI----MWSQRDPSLRK--SGVGNVFIKNLDKSIDNKAMYDT 130
+RA++ MN LKG + + R+ LR S N++IKN +D++ + D
Sbjct: 208 ADRAIEEMNGKLLKGCKVFVGRFKNRKDREAELRSKASEFTNIYIKNFGGDMDDERLKDV 267
Query: 131 FSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRK 190
FS +G LS KV D G SKG+GFV F++ EAA K++E++NG +N +++FVG+ +
Sbjct: 268 FSKYGKTLSVKVMTDSSGKSKGFGFVSFDSHEAAKKAVEEMNGRDINGQLIFVGRAQKKV 327
Query: 191 EREKELGEKAKLF----------TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDG 240
ER+ EL + + +YIKN + +DEKL+ F +G+I+ +VM +G
Sbjct: 328 ERQAELKQMFEQLKRERIRGCQGVKLYIKNLDDTIDDEKLRNEFSSFGSISRVKVMQEEG 387
Query: 241 KSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
+S+GFG + + SPE A KA+ NG+ + K L + AQ+
Sbjct: 388 QSKGFGLICFSSPEDATKAMTEMNGRILGSKPLSIALAQR 427
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 119/228 (52%), Gaps = 17/228 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + ++ FS G +LS ++ +D+ S GY +V+F A K++
Sbjct: 67 MASLYVGDLHADVTEDLLFRKFSTVGPVLSIRICRDQVTRRSLGYAYVNFLQLADAQKAL 126
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N ++ GK I +++ + NV+IKN + +++ L E F +G
Sbjct: 127 DTMNFDIIK------GKSIRLMWSQRDAYLRRSGIGNVFIKNLDKSIDNKTLYEHFSAFG 180
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S +VM++D S+G+ FV +++ A++A++ NGK + G ++VGR + + +R EL
Sbjct: 181 KILSSKVMSDDQGSKGYAFVHFQNQSAADRAIEEMNGKLLKGCKVFVGRFKNRKDREAEL 240
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ + N+Y+KN +DDERL+ F+ +G S K
Sbjct: 241 RSKASEF----------TNIYIKNFGGDMDDERLKDVFSKYGKTLSVK 278
>gi|397485813|ref|XP_003814033.1| PREDICTED: LOW QUALITY PROTEIN: polyadenylate-binding protein
4-like [Pan paniscus]
Length = 427
Score = 328 bits (840), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 158/264 (59%), Positives = 208/264 (78%), Gaps = 2/264 (0%)
Query: 74 MLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSA 133
+ D ++ALDTMNFD +KG+ IR+MWSQRD LR+SG+GNVFIKNLDKSIDNK +Y+ FSA
Sbjct: 118 LADAQKALDTMNFDIIKGKSIRLMWSQRDAYLRRSGIGNVFIKNLDKSIDNKTLYEHFSA 177
Query: 134 FGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKERE 193
FG ILS KV D+QG SKGY FVHF+ + AA+++IE++NG LL VFVG+F RK+RE
Sbjct: 178 FGKILSSKVMSDDQG-SKGYAFVHFQNQSAADRAIEEMNGKLLKGCKVFVGRFKNRKDRE 236
Query: 194 KELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYES 252
EL KA FTN+YIKNFG D +DE+LK++F YG S +VM ++ GKS+GFGFV+++S
Sbjct: 237 AELRSKASEFTNIYIKNFGGDMDDERLKDVFSKYGKTLSVKVMTDSSGKSKGFGFVSFDS 296
Query: 253 PEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKN 312
E A+KAV+ NG++++G++++VGRAQKK ER ELK+ FE LK ER+ QGV LY+KN
Sbjct: 297 HEAAKKAVEEMNGRDINGQLIFVGRAQKKVERQAELKQMFEQLKRERIRGCQGVKLYIKN 356
Query: 313 LDDSIDDERLRKEFTPFGTITSAK 336
LDD+IDDE+LR EF+ FG+I+ K
Sbjct: 357 LDDTIDDEKLRNEFSSFGSISRVK 380
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 78/220 (35%), Positives = 125/220 (56%), Gaps = 16/220 (7%)
Query: 77 TERALDTMNFDALKGRPIRI----MWSQRDPSLRK--SGVGNVFIKNLDKSIDNKAMYDT 130
+RA++ MN LKG + + R+ LR S N++IKN +D++ + D
Sbjct: 207 ADRAIEEMNGKLLKGCKVFVGRFKNRKDREAELRSKASEFTNIYIKNFGGDMDDERLKDV 266
Query: 131 FSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRK 190
FS +G LS KV D G SKG+GFV F++ EAA K++E++NG +N +++FVG+ +
Sbjct: 267 FSKYGKTLSVKVMTDSSGKSKGFGFVSFDSHEAAKKAVEEMNGRDINGQLIFVGRAQKKV 326
Query: 191 EREKELGEKAKLF----------TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDG 240
ER+ EL + + +YIKN + +DEKL+ F +G+I+ +VM +G
Sbjct: 327 ERQAELKQMFEQLKRERIRGCQGVKLYIKNLDDTIDDEKLRNEFSSFGSISRVKVMQEEG 386
Query: 241 KSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
+S+GFG + + SPE A KA+ NG+ + K L + AQ+
Sbjct: 387 QSKGFGLICFSSPEDATKAMTEMNGRILGSKPLSIALAQR 426
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 119/228 (52%), Gaps = 17/228 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + ++ FS G +LS ++ +D+ S GY +V+F A K++
Sbjct: 66 MASLYVGDLHADVTEDLLFRKFSTVGPVLSIRICRDQVTRRSLGYAYVNFLQLADAQKAL 125
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N ++ GK I +++ + NV+IKN + +++ L E F +G
Sbjct: 126 DTMNFDIIK------GKSIRLMWSQRDAYLRRSGIGNVFIKNLDKSIDNKTLYEHFSAFG 179
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S +VM++D S+G+ FV +++ A++A++ NGK + G ++VGR + + +R EL
Sbjct: 180 KILSSKVMSDDQGSKGYAFVHFQNQSAADRAIEEMNGKLLKGCKVFVGRFKNRKDREAEL 239
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ + N+Y+KN +DDERL+ F+ +G S K
Sbjct: 240 RSKASEF----------TNIYIKNFGGDMDDERLKDVFSKYGKTLSVK 277
>gi|431899704|gb|ELK07658.1| Polyadenylate-binding protein 4-like protein [Pteropus alecto]
Length = 370
Score = 328 bits (840), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 158/265 (59%), Positives = 207/265 (78%), Gaps = 2/265 (0%)
Query: 73 YMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFS 132
++ D ++ALDTMNFD +KG+ IR+MWSQRD LRKSG+GNVFIKNL KSIDNK +Y+ FS
Sbjct: 60 HLADAQKALDTMNFDMIKGKSIRLMWSQRDAYLRKSGIGNVFIKNLHKSIDNKTLYEHFS 119
Query: 133 AFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKER 192
AFG ILS KV D+ G S+GY FVHF+++ AA+++IE +NG LL +FVG F RK+R
Sbjct: 120 AFGKILSSKVMSDDAG-SRGYAFVHFQSQTAADRAIEAMNGALLKGCRLFVGPFKNRKDR 178
Query: 193 EKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GKSRGFGFVAYE 251
+ EL KA FTNVYIKNFG+D +DE+LKE+F +G I S +VM + G+S+GFGFV+++
Sbjct: 179 QAELQNKANEFTNVYIKNFGDDMDDERLKEIFSHFGKILSVKVMTDSRGRSKGFGFVSFD 238
Query: 252 SPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVK 311
S E A++AV+ NGK++ G+ L+VGRAQKKAER ELK FE +K ER R++GV LY+K
Sbjct: 239 SHEAAQRAVEIMNGKDLSGQPLFVGRAQKKAERQAELKLMFEQMKQERYRRFRGVKLYIK 298
Query: 312 NLDDSIDDERLRKEFTPFGTITSAK 336
NLDDSIDDERLR+EF+ FG+I+ K
Sbjct: 299 NLDDSIDDERLRREFSSFGSISRVK 323
Score = 134 bits (336), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 79/220 (35%), Positives = 125/220 (56%), Gaps = 16/220 (7%)
Query: 77 TERALDTMNFDALKGRPIRI----MWSQRDPSLRKSG--VGNVFIKNLDKSIDNKAMYDT 130
+RA++ MN LKG + + R L+ NV+IKN +D++ + +
Sbjct: 150 ADRAIEAMNGALLKGCRLFVGPFKNRKDRQAELQNKANEFTNVYIKNFGDDMDDERLKEI 209
Query: 131 FSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRK 190
FS FG ILS KV D +G SKG+GFV F++ EAA +++E +NG L+ + +FVG+ +
Sbjct: 210 FSHFGKILSVKVMTDSRGRSKGFGFVSFDSHEAAQRAVEIMNGKDLSGQPLFVGRAQKKA 269
Query: 191 EREKELG--------EKAKLFTNV--YIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDG 240
ER+ EL E+ + F V YIKN + +DE+L+ F +G+I+ +VM +G
Sbjct: 270 ERQAELKLMFEQMKQERYRRFRGVKLYIKNLDDSIDDERLRREFSSFGSISRVKVMKEEG 329
Query: 241 KSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
+S+GFG + + SPE A KA+ NG+ + K L + AQ+
Sbjct: 330 RSKGFGLICFSSPEEATKAMVEMNGRILGSKSLNIALAQR 369
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 122/227 (53%), Gaps = 17/227 (7%)
Query: 111 GNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQD-EQGNSKGYGFVHFETEEAANKSIE 169
++++ +L + ++ FSA G +LS ++ +D S GY +V+F A K+++
Sbjct: 10 ASLYVGDLHAEVTEDLLFKKFSAVGPVLSIRICRDLVTQRSLGYAYVNFLHLADAQKALD 69
Query: 170 KVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGT 229
+N ++ GK I +++ + NV+IKN + +++ L E F +G
Sbjct: 70 TMNFDMIK------GKSIRLMWSQRDAYLRKSGIGNVFIKNLHKSIDNKTLYEHFSAFGK 123
Query: 230 ITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELK 289
I S +VM++D SRG+ FV ++S A++A++A NG + G L+VG + + +R EL+
Sbjct: 124 ILSSKVMSDDAGSRGYAFVHFQSQTAADRAIEAMNGALLKGCRLFVGPFKNRKDRQAELQ 183
Query: 290 RRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ N + N+Y+KN D +DDERL++ F+ FG I S K
Sbjct: 184 --------NKANEF--TNVYIKNFGDDMDDERLKEIFSHFGKILSVK 220
>gi|354544113|emb|CCE40835.1| hypothetical protein CPAR2_108740 [Candida parapsilosis]
Length = 650
Score = 328 bits (840), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 155/262 (59%), Positives = 205/262 (78%), Gaps = 1/262 (0%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D E+A+D +N+ ++GRP RIMWSQRDPS R+SG GN+FIKNL +IDNKA++DTFSAFG
Sbjct: 116 DGEKAIDELNYSLVEGRPCRIMWSQRDPSARRSGDGNIFIKNLHPAIDNKALHDTFSAFG 175
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
ILSCKVA D+ G SK +GFVH+ET EAA +IE VNGMLLN + VFVGK + +K+RE +
Sbjct: 176 RILSCKVATDDMGQSKCFGFVHYETGEAAEAAIENVNGMLLNDREVFVGKHVSKKDRESK 235
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITS-YRVMNNDGKSRGFGFVAYESPE 254
E +TN+Y+KN F +++ +E+F PYG ITS Y + DGKS+GFGFV YE +
Sbjct: 236 FEEMKANYTNIYVKNIDLGFTEKEFEELFAPYGKITSIYLEKDQDGKSKGFGFVNYEEHK 295
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A AV+A N KE++G+ +YVGRAQKK ERT+ELK+++E +++E+L++YQGVNL++KNLD
Sbjct: 296 SAVDAVEALNDKEINGQKIYVGRAQKKRERTEELKKQYEAIRLEKLSKYQGVNLFIKNLD 355
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
D ID E+L +EF PFGTITSAK
Sbjct: 356 DQIDSEKLEEEFKPFGTITSAK 377
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 71/198 (35%), Positives = 123/198 (62%), Gaps = 11/198 (5%)
Query: 107 KSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANK 166
K+ N+++KN+D K + F+ +G I S + +D+ G SKG+GFV++E ++A
Sbjct: 240 KANYTNIYVKNIDLGFTEKEFEELFAPYGKITSIYLEKDQDGKSKGFGFVNYEEHKSAVD 299
Query: 167 SIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFN 216
++E +N +N + ++VG+ ++ER +EL ++ + N++IKN + +
Sbjct: 300 AVEALNDKEINGQKIYVGRAQKKRERTEELKKQYEAIRLEKLSKYQGVNLFIKNLDDQID 359
Query: 217 DEKLKEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYV 275
EKL+E F+P+GTITS +VM +D GKS+GFGFV + +PE A KA+ N + ++GK LYV
Sbjct: 360 SEKLEEEFKPFGTITSAKVMVDDAGKSKGFGFVCFSTPEEATKAITEMNQRMINGKPLYV 419
Query: 276 GRAQKKAERTQELKRRFE 293
AQ+K R +L+++ +
Sbjct: 420 ALAQRKDVRRSQLEQQIQ 437
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 68/151 (45%), Gaps = 18/151 (11%)
Query: 188 PRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGF 245
P E + ELG A+ ++Y+ N+ L E+F P G ++S RV + KS G+
Sbjct: 47 PSSEEQGELGGVAENSASLYVGELNPSVNEATLFEIFSPIGQVSSIRVCRDAVTKKSLGY 106
Query: 246 GFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQG 305
+V Y E EKA+ N V+G+ + +Q+ R
Sbjct: 107 AYVNYHKFEDGEKAIDELNYSLVEGRPCRIMWSQRDPS----------------ARRSGD 150
Query: 306 VNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
N+++KNL +ID++ L F+ FG I S K
Sbjct: 151 GNIFIKNLHPAIDNKALHDTFSAFGRILSCK 181
>gi|148223119|ref|NP_001088471.1| uncharacterized protein LOC495336 [Xenopus laevis]
gi|54311231|gb|AAH84798.1| LOC495336 protein [Xenopus laevis]
Length = 711
Score = 327 bits (839), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 158/263 (60%), Positives = 201/263 (76%), Gaps = 4/263 (1%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D ERAL+ MN++ + GRPIRIMWSQRDPSLRKSG+GN+FIKNL K+I+ K +YDTFS FG
Sbjct: 55 DAERALEQMNYEVVMGRPIRIMWSQRDPSLRKSGLGNIFIKNLAKTIEQKELYDTFSLFG 114
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
ILSCK+A DE GNSKGYGFVHFE EE A ++I+KVN M + K+V+VG FIPR +R+ +
Sbjct: 115 RILSCKIAMDENGNSKGYGFVHFENEECAKRAIQKVNNMSICGKVVYVGNFIPRSDRKSQ 174
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPE 254
+ + F N+Y+KNF + +DEKLKEMF +G I S VM +++GKS+GFGFV Y +PE
Sbjct: 175 --NRKQKFNNIYVKNFPPETDDEKLKEMFTEFGEIKSACVMKDSEGKSKGFGFVCYLNPE 232
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRY-QGVNLYVKNL 313
AE AV A +GKE+ G+ LY RAQ+K ER +ELK R E K ER ++Y VNLYVKNL
Sbjct: 233 HAEAAVAAMHGKEIGGRSLYASRAQRKEERQEELKLRLEKQKAERRSKYVSNVNLYVKNL 292
Query: 314 DDSIDDERLRKEFTPFGTITSAK 336
DD IDDERL++ F+ +G I+SAK
Sbjct: 293 DDEIDDERLKEIFSKYGPISSAK 315
Score = 127 bits (318), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 76/228 (33%), Positives = 129/228 (56%), Gaps = 16/228 (7%)
Query: 77 TERALDTMNFDALKGRPIR----IMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFS 132
+RA+ +N ++ G+ + I S R RK N+++KN D++ + + F+
Sbjct: 143 AKRAIQKVNNMSICGKVVYVGNFIPRSDRKSQNRKQKFNNIYVKNFPPETDDEKLKEMFT 202
Query: 133 AFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKER 192
FG I S V +D +G SKG+GFV + E A ++ ++G + + ++ + ++ER
Sbjct: 203 EFGEIKSACVMKDSEGKSKGFGFVCYLNPEHAEAAVAAMHGKEIGGRSLYASRAQRKEER 262
Query: 193 EKELG---------EKAKLFTNV--YIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDG 240
++EL ++K +NV Y+KN ++ +DE+LKE+F YG I+S +VM +++
Sbjct: 263 QEELKLRLEKQKAERRSKYVSNVNLYVKNLDDEIDDERLKEIFSKYGPISSAKVMTDSNN 322
Query: 241 KSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
+S+GFGFV + +PE A KAV NG+ K LYV AQ+K +R EL
Sbjct: 323 RSKGFGFVCFTNPEQATKAVTEANGRVEYSKPLYVAIAQRKEDRRAEL 370
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 122/227 (53%), Gaps = 22/227 (9%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQD-EQGNSKGYGFVHFETEEAANKSIEK 170
++++ +L I++ + FS G + V +D S GYG+V+FE + A +++E+
Sbjct: 3 SLYVGDLHPDINDDQLRMKFSEIGPVAVAHVCRDVTSRKSLGYGYVNFEDPKDAERALEQ 62
Query: 171 VNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTI 230
+N V +G+ I +++ + N++IKN + ++L + F +G I
Sbjct: 63 MN------YEVVMGRPIRIMWSQRDPSLRKSGLGNIFIKNLAKTIEQKELYDTFSLFGRI 116
Query: 231 TSYRV-MNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAER-TQEL 288
S ++ M+ +G S+G+GFV +E+ E A++A+Q N + GK++YVG +++R +Q
Sbjct: 117 LSCKIAMDENGNSKGYGFVHFENEECAKRAIQKVNNMSICGKVVYVGNFIPRSDRKSQNR 176
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSA 335
K++F N+YVKN DDE+L++ FT FG I SA
Sbjct: 177 KQKFN-------------NIYVKNFPPETDDEKLKEMFTEFGEIKSA 210
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 53/95 (55%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
N+++KNLD ID++ + + FS +G I S KV D SKG+GFV F E A K++ +
Sbjct: 286 NLYVKNLDDEIDDERLKEIFSKYGPISSAKVMTDSNNRSKGFGFVCFTNPEQATKAVTEA 345
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNV 206
NG + SK ++V +++R EL K N
Sbjct: 346 NGRVEYSKPLYVAIAQRKEDRRAELAAKHTQHLNA 380
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 67/137 (48%), Gaps = 20/137 (14%)
Query: 203 FTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAV 260
T++Y+ + D ND++L+ F G + V + KS G+G+V +E P+ AE+A+
Sbjct: 1 MTSLYVGDLHPDINDDQLRMKFSEIGPVAVAHVCRDVTSRKSLGYGYVNFEDPKDAERAL 60
Query: 261 QAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGV-NLYVKNLDDSIDD 319
+ N + V G+ + + +Q+ R G+ N+++KNL +I+
Sbjct: 61 EQMNYEVVMGRPIRIMWSQRDPSL-----------------RKSGLGNIFIKNLAKTIEQ 103
Query: 320 ERLRKEFTPFGTITSAK 336
+ L F+ FG I S K
Sbjct: 104 KELYDTFSLFGRILSCK 120
>gi|390597906|gb|EIN07305.1| polyadenylate binding protein [Punctularia strigosozonata HHB-11173
SS5]
Length = 668
Score = 327 bits (839), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 150/262 (57%), Positives = 205/262 (78%), Gaps = 1/262 (0%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D ERAL+ +N+ +KGR RIMWSQRDP+LRK+G GN+FIKNLD +IDNKA++DTF+AFG
Sbjct: 105 DGERALEQLNYSLIKGRACRIMWSQRDPALRKTGQGNIFIKNLDDAIDNKALHDTFAAFG 164
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
++LSCKVA DE G SKGYGFVH+ET EAA +I+ VNGMLLN K V+VG + +K+R+ +
Sbjct: 165 NVLSCKVATDEMGRSKGYGFVHYETNEAAESAIKAVNGMLLNDKKVYVGHHVSKKDRQAK 224
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPE 254
L E+ K FTNVY+KN + ND++ +E+F P+G +TS + + +G+SRGFGFV +E+ E
Sbjct: 225 LDEQKKQFTNVYVKNIDPEANDDEFRELFTPFGNVTSAVLQRDEEGRSRGFGFVNFETHE 284
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A+KAV + + G+ L+V RAQKK+ER +EL+R +E K+E++++YQGVNLY+KNL+
Sbjct: 285 EAQKAVDTLHDSDFKGRKLFVSRAQKKSEREEELRRSYEQAKMEKMSKYQGVNLYIKNLE 344
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
D +DDE+LR F PFG ITSAK
Sbjct: 345 DDVDDEKLRDAFEPFGAITSAK 366
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 76/192 (39%), Positives = 120/192 (62%), Gaps = 11/192 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV++KN+D ++ + F+ FG++ S + +DE+G S+G+GFV+FET E A K+++ +
Sbjct: 234 NVYVKNIDPEANDDEFRELFTPFGNVTSAVLQRDEEGRSRGFGFVNFETHEEAQKAVDTL 293
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELG---EKAKL-------FTNVYIKNFGEDFNDEKLK 221
+ + +FV + + ERE+EL E+AK+ N+YIKN +D +DEKL+
Sbjct: 294 HDSDFKGRKLFVSRAQKKSEREEELRRSYEQAKMEKMSKYQGVNLYIKNLEDDVDDEKLR 353
Query: 222 EMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
+ FEP+G ITS +VM + G S+GFGFV + SP+ A KAV N K + K LYV AQ+
Sbjct: 354 DAFEPFGAITSAKVMRTEGGTSKGFGFVCFSSPDEATKAVAEMNNKMMGSKPLYVSLAQR 413
Query: 281 KAERTQELKRRF 292
+ R Q+L+ +
Sbjct: 414 REVRRQQLESQI 425
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 79/138 (57%), Gaps = 18/138 (13%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQ----RDPSLRKS-------------GVGNVFIKNL 118
+ ++A+DT++ KGR + + +Q R+ LR+S GV N++IKNL
Sbjct: 285 EAQKAVDTLHDSDFKGRKLFVSRAQKKSEREEELRRSYEQAKMEKMSKYQGV-NLYIKNL 343
Query: 119 DKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNS 178
+ +D++ + D F FG+I S KV + E G SKG+GFV F + + A K++ ++N ++ S
Sbjct: 344 EDDVDDEKLRDAFEPFGAITSAKVMRTEGGTSKGFGFVCFSSPDEATKAVAEMNNKMMGS 403
Query: 179 KIVFVGKFIPRKEREKEL 196
K ++V R+ R ++L
Sbjct: 404 KPLYVSLAQRREVRRQQL 421
Score = 45.4 bits (106), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 63/135 (46%), Gaps = 18/135 (13%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQ 261
++Y+ ++ L E+F G + S RV + +S G+ +V Y + E+A++
Sbjct: 52 ASLYVGELDPTVSEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYFNAADGERALE 111
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDER 321
N + G+ + +Q R L++ QG N+++KNLDD+ID++
Sbjct: 112 QLNYSLIKGRACRIMWSQ----RDPALRKTG-----------QG-NIFIKNLDDAIDNKA 155
Query: 322 LRKEFTPFGTITSAK 336
L F FG + S K
Sbjct: 156 LHDTFAAFGNVLSCK 170
>gi|1616770|gb|AAB16848.1| putative poly(A)-binding protein FabM [Emericella nidulans]
Length = 705
Score = 327 bits (839), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 156/260 (60%), Positives = 205/260 (78%), Gaps = 1/260 (0%)
Query: 78 ERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSI 137
ERALD +N+ +KG+P RIMWSQRDP+LRK+G GNVFIKNLD +IDNKA++DTF+AFG+I
Sbjct: 97 ERALDELNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDSAIDNKALHDTFAAFGNI 156
Query: 138 LSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELG 197
LSCKVAQDE G SKGYGFVH+ET EAAN +I+ VNGMLLN K VFVG I +K+R+ +
Sbjct: 157 LSCKVAQDEFGVSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISKKDRQSKFE 216
Query: 198 EKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPEFA 256
E FTN+YIKN + DE+ +++FE +G ITS + +++GKSRGFGFV + + E A
Sbjct: 217 EMKANFTNIYIKNIDPEVEDEEFRKLFEKFGEITSATLSRDSEGKSRGFGFVNFSTHESA 276
Query: 257 EKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDS 316
+ AV+ N KEV + LYVGRAQKK ER +EL++++E ++E+ ++YQGVNLYVKNL D
Sbjct: 277 QAAVEEMNDKEVRSQKLYVGRAQKKHEREEELRKQYEAARMEKASKYQGVNLYVKNLTDD 336
Query: 317 IDDERLRKEFTPFGTITSAK 336
+DD++LR+ F P+GTITSAK
Sbjct: 337 VDDDKLRELFGPYGTITSAK 356
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 80/245 (32%), Positives = 125/245 (51%), Gaps = 62/245 (25%)
Query: 107 KSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANK 166
K+ N++IKN+D ++++ F FG I S +++D +G S+G+GFV+F T E+A
Sbjct: 219 KANFTNIYIKNIDPEVEDEEFRKLFEKFGEITSATLSRDSEGKSRGFGFVNFSTHESAQA 278
Query: 167 SIEKVNGMLLNSKIVFVGKFIPRKEREKELG--------EKAKLF--TNVYIKNFGEDFN 216
++E++N + S+ ++VG+ + ERE+EL EKA + N+Y+KN +D +
Sbjct: 279 AVEEMNDKEVRSQKLYVGRAQKKHEREEELRKQYEAARMEKASKYQGVNLYVKNLTDDVD 338
Query: 217 DEKLKEMFEPYGTITSYRVMNND------------------------------------- 239
D+KL+E+F PYGTITS +VM +
Sbjct: 339 DDKLRELFGPYGTITSAKVMRDTAPVETATPESETKESANKENEKAAEGEKEPAAEEKEK 398
Query: 240 ---------------GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAER 284
GKS+GFGFV + SP+ A KAV N + V+GK LYV AQ+K R
Sbjct: 399 EEEKEAEQKPEKKPLGKSKGFGFVCFSSPDEASKAVTEMNQRMVNGKPLYVALAQRKDVR 458
Query: 285 TQELK 289
+L+
Sbjct: 459 RSQLE 463
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 120/226 (53%), Gaps = 18/226 (7%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSIEK 170
++++ LD S+ +Y+ FS+ G + S +V +D S GY +V++ +++++
Sbjct: 43 SLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNDTAHGERALDE 102
Query: 171 VNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTI 230
+N L+ K I +R+ L + + NV+IKN +++ L + F +G I
Sbjct: 103 LNYTLIKGKPC----RIMWSQRDPALRKTGQ--GNVFIKNLDSAIDNKALHDTFAAFGNI 156
Query: 231 TSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELK 289
S +V ++ G S+G+GFV YE+ E A A++ NG ++ K ++VG K +R +
Sbjct: 157 LSCKVAQDEFGVSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISKKDR----Q 212
Query: 290 RRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSA 335
+FE +K N+Y+KN+D ++DE RK F FG ITSA
Sbjct: 213 SKFEEMKANF------TNIYIKNIDPEVEDEEFRKLFEKFGEITSA 252
>gi|297674344|ref|XP_002815190.1| PREDICTED: polyadenylate-binding protein 4-like [Pongo abelii]
Length = 428
Score = 327 bits (839), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 158/264 (59%), Positives = 208/264 (78%), Gaps = 2/264 (0%)
Query: 74 MLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSA 133
+ D ++ALDTMNFD +KG+ IR+MWSQRD LR+SG+GNVFIKNLDKSIDNK +Y+ FSA
Sbjct: 119 LADAQKALDTMNFDIIKGKSIRLMWSQRDAYLRRSGIGNVFIKNLDKSIDNKTLYEHFSA 178
Query: 134 FGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKERE 193
FG ILS KV D+QG SKGY FVHF+ + AA+++IE++NG LL VFVG+F RK+RE
Sbjct: 179 FGKILSSKVMSDDQG-SKGYAFVHFQNQSAADRAIEEMNGKLLKGCKVFVGRFKNRKDRE 237
Query: 194 KELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYES 252
EL KA FTN+YIKNFG D +DE+LK++F YG S +VM ++ GKS+GFGFV+++S
Sbjct: 238 AELRSKASEFTNIYIKNFGGDMDDERLKDVFSKYGKTLSVKVMTDSSGKSKGFGFVSFDS 297
Query: 253 PEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKN 312
E A+KAV+ NG++++G++++VGRAQKK ER ELK+ FE LK ER+ QGV LY+KN
Sbjct: 298 HEAAKKAVEEMNGRDINGQLIFVGRAQKKVERQAELKQMFEQLKRERICGCQGVKLYIKN 357
Query: 313 LDDSIDDERLRKEFTPFGTITSAK 336
LDD+IDDE+LR EF+ FG+I+ K
Sbjct: 358 LDDTIDDEKLRNEFSSFGSISRVK 381
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 78/220 (35%), Positives = 125/220 (56%), Gaps = 16/220 (7%)
Query: 77 TERALDTMNFDALKGRPIRI----MWSQRDPSLRK--SGVGNVFIKNLDKSIDNKAMYDT 130
+RA++ MN LKG + + R+ LR S N++IKN +D++ + D
Sbjct: 208 ADRAIEEMNGKLLKGCKVFVGRFKNRKDREAELRSKASEFTNIYIKNFGGDMDDERLKDV 267
Query: 131 FSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRK 190
FS +G LS KV D G SKG+GFV F++ EAA K++E++NG +N +++FVG+ +
Sbjct: 268 FSKYGKTLSVKVMTDSSGKSKGFGFVSFDSHEAAKKAVEEMNGRDINGQLIFVGRAQKKV 327
Query: 191 EREKELGEKAKLF----------TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDG 240
ER+ EL + + +YIKN + +DEKL+ F +G+I+ +VM +G
Sbjct: 328 ERQAELKQMFEQLKRERICGCQGVKLYIKNLDDTIDDEKLRNEFSSFGSISRVKVMQEEG 387
Query: 241 KSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
+S+GFG + + SPE A KA+ NG+ + K L + AQ+
Sbjct: 388 QSKGFGLICFSSPEDATKAMTEMNGRILGSKPLSIALAQR 427
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 119/228 (52%), Gaps = 17/228 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + ++ FS G +LS ++ +D+ S GY +V+F A K++
Sbjct: 67 MASLYVGDLHADVTEDLLFRKFSTVGPVLSIRICRDQVTRRSLGYAYVNFLQLADAQKAL 126
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N ++ GK I +++ + NV+IKN + +++ L E F +G
Sbjct: 127 DTMNFDIIK------GKSIRLMWSQRDAYLRRSGIGNVFIKNLDKSIDNKTLYEHFSAFG 180
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S +VM++D S+G+ FV +++ A++A++ NGK + G ++VGR + + +R EL
Sbjct: 181 KILSSKVMSDDQGSKGYAFVHFQNQSAADRAIEEMNGKLLKGCKVFVGRFKNRKDREAEL 240
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ + N+Y+KN +DDERL+ F+ +G S K
Sbjct: 241 RSKASEF----------TNIYIKNFGGDMDDERLKDVFSKYGKTLSVK 278
>gi|158563873|sp|Q5B630.2|PABP_EMENI RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|259481418|tpe|CBF74916.1| TPA: Polyadenylate-binding protein, cytoplasmic and nuclear
(Poly(A)-binding protein)(PABP)(Polyadenylate
tail-binding protein)
[Source:UniProtKB/Swiss-Prot;Acc:Q5B630] [Aspergillus
nidulans FGSC A4]
Length = 732
Score = 327 bits (839), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 156/260 (60%), Positives = 205/260 (78%), Gaps = 1/260 (0%)
Query: 78 ERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSI 137
ERALD +N+ +KG+P RIMWSQRDP+LRK+G GNVFIKNLD +IDNKA++DTF+AFG+I
Sbjct: 97 ERALDELNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDSAIDNKALHDTFAAFGNI 156
Query: 138 LSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELG 197
LSCKVAQDE G SKGYGFVH+ET EAAN +I+ VNGMLLN K VFVG I +K+R+ +
Sbjct: 157 LSCKVAQDEFGVSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISKKDRQSKFE 216
Query: 198 EKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPEFA 256
E FTN+YIKN + DE+ +++FE +G ITS + +++GKSRGFGFV + + E A
Sbjct: 217 EMKANFTNIYIKNIDPEVEDEEFRKLFEKFGEITSATLSRDSEGKSRGFGFVNFSTHESA 276
Query: 257 EKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDS 316
+ AV+ N KEV + LYVGRAQKK ER +EL++++E ++E+ ++YQGVNLYVKNL D
Sbjct: 277 QAAVEEMNDKEVRSQKLYVGRAQKKHEREEELRKQYEAARMEKASKYQGVNLYVKNLTDD 336
Query: 317 IDDERLRKEFTPFGTITSAK 336
+DD++LR+ F P+GTITSAK
Sbjct: 337 VDDDKLRELFGPYGTITSAK 356
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 80/245 (32%), Positives = 125/245 (51%), Gaps = 62/245 (25%)
Query: 107 KSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANK 166
K+ N++IKN+D ++++ F FG I S +++D +G S+G+GFV+F T E+A
Sbjct: 219 KANFTNIYIKNIDPEVEDEEFRKLFEKFGEITSATLSRDSEGKSRGFGFVNFSTHESAQA 278
Query: 167 SIEKVNGMLLNSKIVFVGKFIPRKEREKELG--------EKAKLF--TNVYIKNFGEDFN 216
++E++N + S+ ++VG+ + ERE+EL EKA + N+Y+KN +D +
Sbjct: 279 AVEEMNDKEVRSQKLYVGRAQKKHEREEELRKQYEAARMEKASKYQGVNLYVKNLTDDVD 338
Query: 217 DEKLKEMFEPYGTITSYRVMNND------------------------------------- 239
D+KL+E+F PYGTITS +VM +
Sbjct: 339 DDKLRELFGPYGTITSAKVMRDTAPVETATPESETKESANKENEKAAEGEKEPAAEEKEK 398
Query: 240 ---------------GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAER 284
GKS+GFGFV + SP+ A KAV N + V+GK LYV AQ+K R
Sbjct: 399 EEKKEAEQKPEKKPLGKSKGFGFVCFSSPDEASKAVTEMNQRMVNGKPLYVALAQRKDVR 458
Query: 285 TQELK 289
+L+
Sbjct: 459 RSQLE 463
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 120/226 (53%), Gaps = 18/226 (7%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSIEK 170
++++ LD S+ +Y+ FS+ G + S +V +D S GY +V++ +++++
Sbjct: 43 SLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNDTAHGERALDE 102
Query: 171 VNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTI 230
+N L+ K I +R+ L + + NV+IKN +++ L + F +G I
Sbjct: 103 LNYTLIKGKPC----RIMWSQRDPALRKTGQ--GNVFIKNLDSAIDNKALHDTFAAFGNI 156
Query: 231 TSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELK 289
S +V ++ G S+G+GFV YE+ E A A++ NG ++ K ++VG K +R +
Sbjct: 157 LSCKVAQDEFGVSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISKKDR----Q 212
Query: 290 RRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSA 335
+FE +K N+Y+KN+D ++DE RK F FG ITSA
Sbjct: 213 SKFEEMKANF------TNIYIKNIDPEVEDEEFRKLFEKFGEITSA 252
>gi|67527154|ref|XP_661604.1| hypothetical protein AN4000.2 [Aspergillus nidulans FGSC A4]
gi|40740281|gb|EAA59471.1| conserved hypothetical protein [Aspergillus nidulans FGSC A4]
Length = 711
Score = 327 bits (839), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 156/260 (60%), Positives = 205/260 (78%), Gaps = 1/260 (0%)
Query: 78 ERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSI 137
ERALD +N+ +KG+P RIMWSQRDP+LRK+G GNVFIKNLD +IDNKA++DTF+AFG+I
Sbjct: 97 ERALDELNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDSAIDNKALHDTFAAFGNI 156
Query: 138 LSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELG 197
LSCKVAQDE G SKGYGFVH+ET EAAN +I+ VNGMLLN K VFVG I +K+R+ +
Sbjct: 157 LSCKVAQDEFGVSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISKKDRQSKFE 216
Query: 198 EKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPEFA 256
E FTN+YIKN + DE+ +++FE +G ITS + +++GKSRGFGFV + + E A
Sbjct: 217 EMKANFTNIYIKNIDPEVEDEEFRKLFEKFGEITSATLSRDSEGKSRGFGFVNFSTHESA 276
Query: 257 EKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDS 316
+ AV+ N KEV + LYVGRAQKK ER +EL++++E ++E+ ++YQGVNLYVKNL D
Sbjct: 277 QAAVEEMNDKEVRSQKLYVGRAQKKHEREEELRKQYEAARMEKASKYQGVNLYVKNLTDD 336
Query: 317 IDDERLRKEFTPFGTITSAK 336
+DD++LR+ F P+GTITSAK
Sbjct: 337 VDDDKLRELFGPYGTITSAK 356
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 80/245 (32%), Positives = 125/245 (51%), Gaps = 62/245 (25%)
Query: 107 KSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANK 166
K+ N++IKN+D ++++ F FG I S +++D +G S+G+GFV+F T E+A
Sbjct: 219 KANFTNIYIKNIDPEVEDEEFRKLFEKFGEITSATLSRDSEGKSRGFGFVNFSTHESAQA 278
Query: 167 SIEKVNGMLLNSKIVFVGKFIPRKEREKELG--------EKAKLF--TNVYIKNFGEDFN 216
++E++N + S+ ++VG+ + ERE+EL EKA + N+Y+KN +D +
Sbjct: 279 AVEEMNDKEVRSQKLYVGRAQKKHEREEELRKQYEAARMEKASKYQGVNLYVKNLTDDVD 338
Query: 217 DEKLKEMFEPYGTITSYRVMNND------------------------------------- 239
D+KL+E+F PYGTITS +VM +
Sbjct: 339 DDKLRELFGPYGTITSAKVMRDTAPVETATPESETKESANKENEKAAEGEKEPAAEEKEK 398
Query: 240 ---------------GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAER 284
GKS+GFGFV + SP+ A KAV N + V+GK LYV AQ+K R
Sbjct: 399 EEKKEAEQKPEKKPLGKSKGFGFVCFSSPDEASKAVTEMNQRMVNGKPLYVALAQRKDVR 458
Query: 285 TQELK 289
+L+
Sbjct: 459 RSQLE 463
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 120/226 (53%), Gaps = 18/226 (7%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSIEK 170
++++ LD S+ +Y+ FS+ G + S +V +D S GY +V++ +++++
Sbjct: 43 SLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNDTAHGERALDE 102
Query: 171 VNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTI 230
+N L+ K I +R+ L + + NV+IKN +++ L + F +G I
Sbjct: 103 LNYTLIKGKPC----RIMWSQRDPALRKTGQ--GNVFIKNLDSAIDNKALHDTFAAFGNI 156
Query: 231 TSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELK 289
S +V ++ G S+G+GFV YE+ E A A++ NG ++ K ++VG K +R +
Sbjct: 157 LSCKVAQDEFGVSKGYGFVHYETAEAANNAIKHVNGMLLNDKKVFVGHHISKKDR----Q 212
Query: 290 RRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSA 335
+FE +K N+Y+KN+D ++DE RK F FG ITSA
Sbjct: 213 SKFEEMKANF------TNIYIKNIDPEVEDEEFRKLFEKFGEITSA 252
>gi|213409529|ref|XP_002175535.1| polyadenylate-binding protein [Schizosaccharomyces japonicus
yFS275]
gi|212003582|gb|EEB09242.1| polyadenylate-binding protein [Schizosaccharomyces japonicus
yFS275]
Length = 621
Score = 327 bits (839), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 159/264 (60%), Positives = 201/264 (76%), Gaps = 1/264 (0%)
Query: 74 MLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSA 133
M D E+ALD +N+ +KGRP RIMWSQRDPSLRK G GNVFIKNLD +IDNKA++DTFSA
Sbjct: 120 MEDGEKALDELNYTLIKGRPCRIMWSQRDPSLRKMGTGNVFIKNLDPAIDNKALHDTFSA 179
Query: 134 FGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKERE 193
FG ILSCKVA DE GNSKGYGFVHF++ ++AN +IE VNGMLLN K V+VG I R++R+
Sbjct: 180 FGKILSCKVAVDELGNSKGYGFVHFDSVDSANAAIEHVNGMLLNDKKVYVGHHISRRDRQ 239
Query: 194 KELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYES 252
+ FTNVY+KN D +E+ ++FE YG ITS + +N GK RGF FV + +
Sbjct: 240 SKFEALKANFTNVYVKNLDLDTTEEEFTKLFEKYGKITSLSLAKDNAGKFRGFAFVNFAT 299
Query: 253 PEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKN 312
+ A++AV N E GK LYVGRAQKK ER +EL++++E +K+E++N+YQGVNL+VKN
Sbjct: 300 HDSAQQAVDELNDFEYKGKKLYVGRAQKKHERQEELRKQYEQMKLEKINKYQGVNLFVKN 359
Query: 313 LDDSIDDERLRKEFTPFGTITSAK 336
L D IDDERL+ EF+ FGTITSAK
Sbjct: 360 LQDEIDDERLKSEFSAFGTITSAK 383
Score = 124 bits (311), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 72/207 (34%), Positives = 119/207 (57%), Gaps = 11/207 (5%)
Query: 107 KSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANK 166
K+ NV++KNLD + F +G I S +A+D G +G+ FV+F T ++A +
Sbjct: 246 KANFTNVYVKNLDLDTTEEEFTKLFEKYGKITSLSLAKDNAGKFRGFAFVNFATHDSAQQ 305
Query: 167 SIEKVNGMLLNSKIVFVGKFIPRKEREKELG---EKAKL-------FTNVYIKNFGEDFN 216
+++++N K ++VG+ + ER++EL E+ KL N+++KN ++ +
Sbjct: 306 AVDELNDFEYKGKKLYVGRAQKKHERQEELRKQYEQMKLEKINKYQGVNLFVKNLQDEID 365
Query: 217 DEKLKEMFEPYGTITSYRVMNNDG-KSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYV 275
DE+LK F +GTITS +VM ++ KS+GFGFV Y +PE A KA+ N + + GK LYV
Sbjct: 366 DERLKSEFSAFGTITSAKVMTDENNKSKGFGFVCYSNPEEATKAIAEMNQRMLAGKPLYV 425
Query: 276 GRAQKKAERTQELKRRFEMLKIERLNR 302
AQ+K R +L+ + + RL +
Sbjct: 426 ALAQRKEVRRSQLEAQIQARNQFRLQQ 452
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 117/229 (51%), Gaps = 18/229 (7%)
Query: 108 SGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANK 166
S +++I LD + +++ F++ G + S +V +D S GY +V+F E K
Sbjct: 66 STSASLYIGELDPMVTEAMLFELFNSIGPVASIRVCRDAVTRRSLGYAYVNFHNMEDGEK 125
Query: 167 SIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEP 226
+++++N L+ + + + R +++G NV+IKN +++ L + F
Sbjct: 126 ALDELNYTLIKGRPCRI-MWSQRDPSLRKMGT-----GNVFIKNLDPAIDNKALHDTFSA 179
Query: 227 YGTITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERT 285
+G I S +V ++ G S+G+GFV ++S + A A++ NG ++ K +YVG + +R
Sbjct: 180 FGKILSCKVAVDELGNSKGYGFVHFDSVDSANAAIEHVNGMLLNDKKVYVGHHISRRDR- 238
Query: 286 QELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITS 334
+ +FE LK N+YVKNLD +E K F +G ITS
Sbjct: 239 ---QSKFEALKA------NFTNVYVKNLDLDTTEEEFTKLFEKYGKITS 278
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/132 (35%), Positives = 69/132 (52%), Gaps = 19/132 (14%)
Query: 77 TERALDTMNFDALKGRPIRIMWSQ----RDPSLRKS-------------GVGNVFIKNLD 119
++A+D +N KG+ + + +Q R LRK GV N+F+KNL
Sbjct: 303 AQQAVDELNDFEYKGKKLYVGRAQKKHERQEELRKQYEQMKLEKINKYQGV-NLFVKNLQ 361
Query: 120 KSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSK 179
ID++ + FSAFG+I S KV DE SKG+GFV + E A K+I ++N +L K
Sbjct: 362 DEIDDERLKSEFSAFGTITSAKVMTDENNKSKGFGFVCYSNPEEATKAIAEMNQRMLAGK 421
Query: 180 IVFVGKFIPRKE 191
++V RKE
Sbjct: 422 PLYVA-LAQRKE 432
>gi|332231054|ref|XP_003264711.1| PREDICTED: polyadenylate-binding protein 4-like [Nomascus
leucogenys]
Length = 428
Score = 327 bits (839), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 158/264 (59%), Positives = 208/264 (78%), Gaps = 2/264 (0%)
Query: 74 MLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSA 133
+ D ++ALDTMNFD +KG+ IR+MWSQRD LR+SG+GNVFIKNLDKSIDNK +Y+ FSA
Sbjct: 119 LADAQKALDTMNFDMIKGKSIRLMWSQRDAYLRRSGIGNVFIKNLDKSIDNKTLYEHFSA 178
Query: 134 FGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKERE 193
FG ILS KV D+QG SKGY FVHF+ + AA+++IE++NG LL VFVG+F RK+RE
Sbjct: 179 FGKILSSKVMSDDQG-SKGYAFVHFQNQSAADRAIEEMNGKLLKGCKVFVGRFKNRKDRE 237
Query: 194 KELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYES 252
EL KA FTN+YIKNFG D +DE+LK++F YG S +VM ++ GKS+GFGFV+++S
Sbjct: 238 AELRSKASEFTNIYIKNFGGDMDDERLKDVFSKYGKTLSVKVMTDSSGKSKGFGFVSFDS 297
Query: 253 PEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKN 312
E A+KAV+ NG++++G++++VGRAQKK ER ELK+ FE LK ER+ QGV LY+KN
Sbjct: 298 HEAAKKAVEEMNGRDINGQLIFVGRAQKKVERQAELKQMFEQLKRERIRGCQGVKLYIKN 357
Query: 313 LDDSIDDERLRKEFTPFGTITSAK 336
LDD+IDDE+LR EF+ FG+I+ K
Sbjct: 358 LDDTIDDEKLRNEFSSFGSISRVK 381
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 78/220 (35%), Positives = 125/220 (56%), Gaps = 16/220 (7%)
Query: 77 TERALDTMNFDALKGRPIRI----MWSQRDPSLRK--SGVGNVFIKNLDKSIDNKAMYDT 130
+RA++ MN LKG + + R+ LR S N++IKN +D++ + D
Sbjct: 208 ADRAIEEMNGKLLKGCKVFVGRFKNRKDREAELRSKASEFTNIYIKNFGGDMDDERLKDV 267
Query: 131 FSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRK 190
FS +G LS KV D G SKG+GFV F++ EAA K++E++NG +N +++FVG+ +
Sbjct: 268 FSKYGKTLSVKVMTDSSGKSKGFGFVSFDSHEAAKKAVEEMNGRDINGQLIFVGRAQKKV 327
Query: 191 EREKELGEKAKLF----------TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDG 240
ER+ EL + + +YIKN + +DEKL+ F +G+I+ +VM +G
Sbjct: 328 ERQAELKQMFEQLKRERIRGCQGVKLYIKNLDDTIDDEKLRNEFSSFGSISRVKVMQEEG 387
Query: 241 KSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
+S+GFG + + SPE A KA+ NG+ + K L + AQ+
Sbjct: 388 QSKGFGLICFSSPEDATKAMTEMNGRILGSKPLSIALAQR 427
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 119/228 (52%), Gaps = 17/228 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + ++ FS G +LS ++ +D+ S GY +V+F A K++
Sbjct: 67 MASLYVGDLHADVTEDLLFRKFSTVGPVLSIRICRDQVTRRSLGYAYVNFLQLADAQKAL 126
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N ++ GK I +++ + NV+IKN + +++ L E F +G
Sbjct: 127 DTMNFDMIK------GKSIRLMWSQRDAYLRRSGIGNVFIKNLDKSIDNKTLYEHFSAFG 180
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S +VM++D S+G+ FV +++ A++A++ NGK + G ++VGR + + +R EL
Sbjct: 181 KILSSKVMSDDQGSKGYAFVHFQNQSAADRAIEEMNGKLLKGCKVFVGRFKNRKDREAEL 240
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ + N+Y+KN +DDERL+ F+ +G S K
Sbjct: 241 RSKASEF----------TNIYIKNFGGDMDDERLKDVFSKYGKTLSVK 278
>gi|385305672|gb|EIF49630.1| polyadenylate-binding protein [Dekkera bruxellensis AWRI1499]
Length = 655
Score = 327 bits (837), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 155/263 (58%), Positives = 203/263 (77%), Gaps = 2/263 (0%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
+ E ALDT+ F +KG+ RIMWSQRDPS+RK G GNVFIKNL IDNK +YDTFS FG
Sbjct: 113 EAEHALDTLAFCDIKGKQCRIMWSQRDPSMRKKGTGNVFIKNLHPDIDNKTLYDTFSTFG 172
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
ILSCK+A DE G+SKG+GFVH++ E+A +IE VNGMLLN+ V+V IPRK+RE +
Sbjct: 173 KILSCKIATDEHGHSKGFGFVHYDDAESAKAAIENVNGMLLNNMEVYVAPHIPRKDRESK 232
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITS-YRVMNNDGKSRGFGFVAYESPE 254
+ E K FTNVY+KNFG + +++L+EMFE YG +TS Y +N+GK+RGFGFV +E
Sbjct: 233 MQEMIKNFTNVYVKNFGPEMTEDQLREMFEAYGKVTSTYLPTDNEGKARGFGFVNFEDHX 292
Query: 255 FAEKAVQAWNGKEVD-GKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNL 313
A KAV A N KE++ G+ILYVGRAQKK ER + L+++++ + ER+++YQGVNL+VKNL
Sbjct: 293 EAAKAVDALNEKELEGGRILYVGRAQKKREREESLRKQWQQARQERISKYQGVNLFVKNL 352
Query: 314 DDSIDDERLRKEFTPFGTITSAK 336
DD+IDD +L++EF P+G ITSAK
Sbjct: 353 DDTIDDTKLKEEFAPYGKITSAK 375
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 74/203 (36%), Positives = 117/203 (57%), Gaps = 12/203 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV++KN + + + F A+G + S + D +G ++G+GFV+FE A K+++ +
Sbjct: 242 NVYVKNFGPEMTEDQLREMFEAYGKVTSTYLPTDNEGKARGFGFVNFEDHXEAAKAVDAL 301
Query: 172 NGMLL-NSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKL 220
N L +I++VG+ ++ERE+ L ++ + N+++KN + +D KL
Sbjct: 302 NEKELEGGRILYVGRAQKKREREESLRKQWQQARQERISKYQGVNLFVKNLDDTIDDTKL 361
Query: 221 KEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQ 279
KE F PYG ITS +VM ND GKSRGFGFV Y PE A +A+ + + V GK LYV AQ
Sbjct: 362 KEEFAPYGKITSAKVMTNDAGKSRGFGFVCYTKPEEATRAINEMHQRMVMGKPLYVALAQ 421
Query: 280 KKAERTQELKRRFEMLKIERLNR 302
+K R +L ++F+ RL +
Sbjct: 422 RKEVRHNQLSQQFQQRNQMRLQQ 444
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 116/226 (51%), Gaps = 18/226 (7%)
Query: 111 GNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSIE 169
++++ +LD S+ +Y+ FS G + S +V +B S Y +V+++ E A +++
Sbjct: 60 ASLYVGDLDPSVTESDLYEIFSKVGQVSSIRVCRBAVTKKSLCYAYVNYQKREEAEHALD 119
Query: 170 KVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGT 229
+ + K I +R+ + +K NV+IKN D +++ L + F +G
Sbjct: 120 TLAFCDIKGKQC----RIMWSQRDPSMRKKGT--GNVFIKNLHPDIDNKTLYDTFSTFGK 173
Query: 230 ITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S ++ ++ G S+GFGFV Y+ E A+ A++ NG ++ +YV + +R ++
Sbjct: 174 ILSCKIATDEHGHSKGFGFVHYDDAESAKAAIENVNGMLLNNMEVYVAPHIPRKDRESKM 233
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITS 334
+ EM+K N+YVKN + +++LR+ F +G +TS
Sbjct: 234 Q---EMIK-------NFTNVYVKNFGPEMTEDQLREMFEAYGKVTS 269
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 78/145 (53%), Gaps = 25/145 (17%)
Query: 76 DTERALDTMNFDALKGRPIRIMW-------SQRDPSLRKS-------------GVGNVFI 115
+ +A+D +N L+G RI++ +R+ SLRK GV N+F+
Sbjct: 293 EAAKAVDALNEKELEGG--RILYVGRAQKKREREESLRKQWQQARQERISKYQGV-NLFV 349
Query: 116 KNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGML 175
KNLD +ID+ + + F+ +G I S KV ++ G S+G+GFV + E A ++I +++ +
Sbjct: 350 KNLDDTIDDTKLKEEFAPYGKITSAKVMTNDAGKSRGFGFVCYTKPEEATRAINEMHQRM 409
Query: 176 LNSKIVFVGKFIPRKE-REKELGEK 199
+ K ++V RKE R +L ++
Sbjct: 410 VMGKPLYVA-LAQRKEVRHNQLSQQ 433
>gi|169853086|ref|XP_001833224.1| polyadenylate-binding protein [Coprinopsis cinerea okayama7#130]
gi|116505602|gb|EAU88497.1| polyadenylate-binding protein [Coprinopsis cinerea okayama7#130]
Length = 681
Score = 327 bits (837), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 153/262 (58%), Positives = 204/262 (77%), Gaps = 1/262 (0%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D ERAL+ +N+ +K RP RIMWSQRDP+LRK+G GN+FIKNLD++IDNKA++DTF+AFG
Sbjct: 102 DGERALEQLNYSLIKNRPCRIMWSQRDPALRKTGQGNIFIKNLDEAIDNKALHDTFAAFG 161
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
++LSCKVA DE G SKGYGFVH+ET EAA +I+ VNGMLLN K V+VG I RKER+ +
Sbjct: 162 TVLSCKVATDETGRSKGYGFVHYETAEAAENAIKAVNGMLLNDKKVYVGHHISRKERQSK 221
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRV-MNNDGKSRGFGFVAYESPE 254
L E FTN+Y+KN + ++ E+F+ YG +TS + ++ +GKS+GFGFV +E+ +
Sbjct: 222 LEEMRAQFTNLYVKNLDPEVTQDEFIELFKKYGNVTSAVISVDEEGKSKGFGFVNFETHD 281
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A+KAV N E+ GK L+V RAQKKAER +EL+R +E K+E+L++YQGVNLY+KNL+
Sbjct: 282 EAQKAVDELNDFELKGKKLFVSRAQKKAEREEELRRSYEQAKLEKLSKYQGVNLYIKNLE 341
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
D +DD++LR EF PFGTITS K
Sbjct: 342 DDVDDDKLRAEFEPFGTITSCK 363
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 79/192 (41%), Positives = 122/192 (63%), Gaps = 11/192 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
N+++KNLD + + F +G++ S ++ DE+G SKG+GFV+FET + A K+++++
Sbjct: 231 NLYVKNLDPEVTQDEFIELFKKYGNVTSAVISVDEEGKSKGFGFVNFETHDEAQKAVDEL 290
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELG---EKAKL-------FTNVYIKNFGEDFNDEKLK 221
N L K +FV + + ERE+EL E+AKL N+YIKN +D +D+KL+
Sbjct: 291 NDFELKGKKLFVSRAQKKAEREEELRRSYEQAKLEKLSKYQGVNLYIKNLEDDVDDDKLR 350
Query: 222 EMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
FEP+GTITS +VM ++ G+S+GFGFV + SP+ A KAV N K + K LYV AQ+
Sbjct: 351 AEFEPFGTITSCKVMRDEKGQSKGFGFVCFSSPDEATKAVAEMNNKMIGTKPLYVSLAQR 410
Query: 281 KAERTQELKRRF 292
+ R Q+L+ +
Sbjct: 411 REVRRQQLESQI 422
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 80/138 (57%), Gaps = 18/138 (13%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQ----RDPSLRKS-------------GVGNVFIKNL 118
+ ++A+D +N LKG+ + + +Q R+ LR+S GV N++IKNL
Sbjct: 282 EAQKAVDELNDFELKGKKLFVSRAQKKAEREEELRRSYEQAKLEKLSKYQGV-NLYIKNL 340
Query: 119 DKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNS 178
+ +D+ + F FG+I SCKV +DE+G SKG+GFV F + + A K++ ++N ++ +
Sbjct: 341 EDDVDDDKLRAEFEPFGTITSCKVMRDEKGQSKGFGFVCFSSPDEATKAVAEMNNKMIGT 400
Query: 179 KIVFVGKFIPRKEREKEL 196
K ++V R+ R ++L
Sbjct: 401 KPLYVSLAQRREVRRQQL 418
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 62/135 (45%), Gaps = 18/135 (13%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQ 261
++Y+ + L E+F G + S RV + +S G+ +V Y + E+A++
Sbjct: 49 ASLYVGELDPTVTEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNAADGERALE 108
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDER 321
N + + + +Q R L++ QG N+++KNLD++ID++
Sbjct: 109 QLNYSLIKNRPCRIMWSQ----RDPALRKTG-----------QG-NIFIKNLDEAIDNKA 152
Query: 322 LRKEFTPFGTITSAK 336
L F FGT+ S K
Sbjct: 153 LHDTFAAFGTVLSCK 167
>gi|426345476|ref|XP_004040437.1| PREDICTED: polyadenylate-binding protein 4-like [Gorilla gorilla
gorilla]
Length = 428
Score = 327 bits (837), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 157/264 (59%), Positives = 208/264 (78%), Gaps = 2/264 (0%)
Query: 74 MLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSA 133
+ D ++ALDTMNFD +KG+ IR+MWSQRD LR+SG+GNVFIKNLDKSIDNK +Y+ FSA
Sbjct: 119 LADAQKALDTMNFDIIKGKSIRLMWSQRDAYLRRSGIGNVFIKNLDKSIDNKTLYEHFSA 178
Query: 134 FGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKERE 193
FG ILS KV D+QG SKGY FVHF+ + AA+++IE++NG LL VFVG+F RK+RE
Sbjct: 179 FGKILSSKVMSDDQG-SKGYAFVHFQNQSAADRAIEEMNGKLLKGCKVFVGRFKNRKDRE 237
Query: 194 KELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYES 252
EL KA FTN+YIKNFG + +DE+LK++F YG S +VM ++ GKS+GFGFV+++S
Sbjct: 238 AELRSKASEFTNIYIKNFGGEMDDERLKDVFSKYGKTLSVKVMTDSSGKSKGFGFVSFDS 297
Query: 253 PEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKN 312
E A+KAV+ NG++++G++++VGRAQKK ER ELK+ FE LK ER+ QGV LY+KN
Sbjct: 298 HEAAKKAVEEMNGRDINGQLIFVGRAQKKVERQAELKQMFEQLKRERIRGCQGVKLYIKN 357
Query: 313 LDDSIDDERLRKEFTPFGTITSAK 336
LDD+IDDE+LR EF+ FG+I+ K
Sbjct: 358 LDDTIDDEKLRNEFSSFGSISRVK 381
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 78/220 (35%), Positives = 125/220 (56%), Gaps = 16/220 (7%)
Query: 77 TERALDTMNFDALKGRPIRI----MWSQRDPSLRK--SGVGNVFIKNLDKSIDNKAMYDT 130
+RA++ MN LKG + + R+ LR S N++IKN +D++ + D
Sbjct: 208 ADRAIEEMNGKLLKGCKVFVGRFKNRKDREAELRSKASEFTNIYIKNFGGEMDDERLKDV 267
Query: 131 FSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRK 190
FS +G LS KV D G SKG+GFV F++ EAA K++E++NG +N +++FVG+ +
Sbjct: 268 FSKYGKTLSVKVMTDSSGKSKGFGFVSFDSHEAAKKAVEEMNGRDINGQLIFVGRAQKKV 327
Query: 191 EREKELGEKAKLF----------TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDG 240
ER+ EL + + +YIKN + +DEKL+ F +G+I+ +VM +G
Sbjct: 328 ERQAELKQMFEQLKRERIRGCQGVKLYIKNLDDTIDDEKLRNEFSSFGSISRVKVMQEEG 387
Query: 241 KSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
+S+GFG + + SPE A KA+ NG+ + K L + AQ+
Sbjct: 388 QSKGFGLICFSSPEDATKAMTEMNGRILGSKPLSIALAQR 427
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 119/228 (52%), Gaps = 17/228 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + ++ FS G +LS ++ +D+ S GY +V+F A K++
Sbjct: 67 MASLYVGDLHADVTEDLLFRKFSTVGPVLSIRICRDQVTRRSLGYAYVNFLQLADAQKAL 126
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N ++ GK I +++ + NV+IKN + +++ L E F +G
Sbjct: 127 DTMNFDIIK------GKSIRLMWSQRDAYLRRSGIGNVFIKNLDKSIDNKTLYEHFSAFG 180
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S +VM++D S+G+ FV +++ A++A++ NGK + G ++VGR + + +R EL
Sbjct: 181 KILSSKVMSDDQGSKGYAFVHFQNQSAADRAIEEMNGKLLKGCKVFVGRFKNRKDREAEL 240
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ + N+Y+KN +DDERL+ F+ +G S K
Sbjct: 241 RSKASEF----------TNIYIKNFGGEMDDERLKDVFSKYGKTLSVK 278
>gi|390460450|ref|XP_002745401.2| PREDICTED: polyadenylate-binding protein 4-like [Callithrix
jacchus]
Length = 384
Score = 327 bits (837), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 158/265 (59%), Positives = 207/265 (78%), Gaps = 2/265 (0%)
Query: 73 YMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFS 132
++ D ++ALDTMNFD +KG+ IR+MWSQRD LR+SG+GNVFIKNLDKSIDNK +Y+ FS
Sbjct: 60 HLADAQKALDTMNFDIIKGKSIRLMWSQRDAYLRRSGIGNVFIKNLDKSIDNKTLYEHFS 119
Query: 133 AFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKER 192
AFG ILS KV D+QG SKGY FVHF+ + AA+++IE++NG LL VFVG+F RK+R
Sbjct: 120 AFGKILSSKVMSDDQG-SKGYAFVHFQNQSAADRAIEEMNGKLLQGCKVFVGRFKSRKDR 178
Query: 193 EKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYE 251
E EL KA FTNVYIKNFG D +DE+LK++F YG S +VM ++ GKS+GFGFV+++
Sbjct: 179 EAELRSKASEFTNVYIKNFGGDMDDERLKDVFSKYGKTLSVKVMTDSSGKSKGFGFVSFD 238
Query: 252 SPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVK 311
S E A+KAV+ NG++++G++++V RAQKK ER ELK+ FE LK ER+ Q V LYVK
Sbjct: 239 SHEAAKKAVEEMNGRDINGQLIFVARAQKKVERQAELKQMFEQLKKERIRGCQVVKLYVK 298
Query: 312 NLDDSIDDERLRKEFTPFGTITSAK 336
NLDD+IDDE+LR EF+ FG+I+ K
Sbjct: 299 NLDDTIDDEKLRNEFSSFGSISRVK 323
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 76/219 (34%), Positives = 123/219 (56%), Gaps = 16/219 (7%)
Query: 77 TERALDTMNFDALKGRPIRI----MWSQRDPSLRK--SGVGNVFIKNLDKSIDNKAMYDT 130
+RA++ MN L+G + + R+ LR S NV+IKN +D++ + D
Sbjct: 150 ADRAIEEMNGKLLQGCKVFVGRFKSRKDREAELRSKASEFTNVYIKNFGGDMDDERLKDV 209
Query: 131 FSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRK 190
FS +G LS KV D G SKG+GFV F++ EAA K++E++NG +N +++FV + +
Sbjct: 210 FSKYGKTLSVKVMTDSSGKSKGFGFVSFDSHEAAKKAVEEMNGRDINGQLIFVARAQKKV 269
Query: 191 EREKELGE----------KAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDG 240
ER+ EL + + +Y+KN + +DEKL+ F +G+I+ +VM +G
Sbjct: 270 ERQAELKQMFEQLKKERIRGCQVVKLYVKNLDDTIDDEKLRNEFSSFGSISRVKVMQEEG 329
Query: 241 KSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQ 279
+S+GFG + + SPE A KA+ NG+ + K L + AQ
Sbjct: 330 QSKGFGLICFSSPEDALKAMTEMNGRILGSKPLSIALAQ 368
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 120/228 (52%), Gaps = 17/228 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSK-GYGFVHFETEEAANKSI 168
+ ++++ +L + ++ FS G +LS ++ +D+ S GY +V+F A K++
Sbjct: 9 MASLYVGDLHADVTEDLLFRKFSTVGPVLSIRICRDQVTRSSLGYAYVNFLHLADAQKAL 68
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N ++ GK I +++ + NV+IKN + +++ L E F +G
Sbjct: 69 DTMNFDIIK------GKSIRLMWSQRDAYLRRSGIGNVFIKNLDKSIDNKTLYEHFSAFG 122
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S +VM++D S+G+ FV +++ A++A++ NGK + G ++VGR + + +R EL
Sbjct: 123 KILSSKVMSDDQGSKGYAFVHFQNQSAADRAIEEMNGKLLQGCKVFVGRFKSRKDREAEL 182
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ + + N+Y+KN +DDERL+ F+ +G S K
Sbjct: 183 RSKAS----------EFTNVYIKNFGGDMDDERLKDVFSKYGKTLSVK 220
>gi|388582290|gb|EIM22595.1| polyadenylate binding protein [Wallemia sebi CBS 633.66]
Length = 637
Score = 327 bits (837), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 156/264 (59%), Positives = 202/264 (76%), Gaps = 1/264 (0%)
Query: 74 MLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSA 133
+ D ERAL+ +N+ +K R RIMWSQRDP+LRK+G GN+FIKNLD++IDNKA++DTF+A
Sbjct: 89 LQDGERALEQLNYSLIKNRACRIMWSQRDPALRKTGQGNIFIKNLDEAIDNKALHDTFAA 148
Query: 134 FGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKERE 193
FG++LSCKVA DE GNS+GYGFVH+E E+A+ +I+ VNGMLLN K V+VG + +KER+
Sbjct: 149 FGNVLSCKVATDENGNSRGYGFVHYENGESASAAIQHVNGMLLNDKKVYVGHHVSKKERQ 208
Query: 194 KELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GKSRGFGFVAYES 252
++ E+ FTNV+IKN +DEK K++ EPYG I S V ++ G SRGFGFV Y++
Sbjct: 209 AKIDEQKSQFTNVFIKNLDVSVDDEKFKQILEPYGEILSAVVQKDEQGNSRGFGFVNYKN 268
Query: 253 PEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKN 312
E A KAV++ N EVDGK ++ RAQKK ER +EL+R +E K+E+L +Y GVNLYVKN
Sbjct: 269 HEEAAKAVESLNEVEVDGKKIFAARAQKKNEREEELRRNYEQAKLEKLAKYAGVNLYVKN 328
Query: 313 LDDSIDDERLRKEFTPFGTITSAK 336
LDD DDERL EF PFGTITSAK
Sbjct: 329 LDDDFDDERLVGEFEPFGTITSAK 352
Score = 155 bits (391), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 87/206 (42%), Positives = 129/206 (62%), Gaps = 11/206 (5%)
Query: 106 RKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAAN 165
+KS NVFIKNLD S+D++ +G ILS V +DEQGNS+G+GFV+++ E A
Sbjct: 214 QKSQFTNVFIKNLDVSVDDEKFKQILEPYGEILSAVVQKDEQGNSRGFGFVNYKNHEEAA 273
Query: 166 KSIEKVNGMLLNSKIVFVGKFIPRKEREKELG---EKAKL-------FTNVYIKNFGEDF 215
K++E +N + ++ K +F + + ERE+EL E+AKL N+Y+KN +DF
Sbjct: 274 KAVESLNEVEVDGKKIFAARAQKKNEREEELRRNYEQAKLEKLAKYAGVNLYVKNLDDDF 333
Query: 216 NDEKLKEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILY 274
+DE+L FEP+GTITS ++M ++ G S+GFGFV + SP+ A KAV +GK + K LY
Sbjct: 334 DDERLVGEFEPFGTITSAKIMRDEKGTSKGFGFVCFSSPDEATKAVSELSGKMIGSKPLY 393
Query: 275 VGRAQKKAERTQELKRRFEMLKIERL 300
V AQ++ R Q+L+ + RL
Sbjct: 394 VSLAQRRDVRRQQLESQIAQRNQLRL 419
Score = 40.8 bits (94), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 62/135 (45%), Gaps = 18/135 (13%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQ 261
++Y+ + L E+F G + S RV + +S G+ +V Y + + E+A++
Sbjct: 38 ASLYVGELDPTVTEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNLQDGERALE 97
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDER 321
N + + + +Q R L++ QG N+++KNLD++ID++
Sbjct: 98 QLNYSLIKNRACRIMWSQ----RDPALRKTG-----------QG-NIFIKNLDEAIDNKA 141
Query: 322 LRKEFTPFGTITSAK 336
L F FG + S K
Sbjct: 142 LHDTFAAFGNVLSCK 156
>gi|440893983|gb|ELR46563.1| Polyadenylate-binding protein 4-like protein [Bos grunniens mutus]
Length = 370
Score = 326 bits (836), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 158/274 (57%), Positives = 210/274 (76%), Gaps = 7/274 (2%)
Query: 69 LGQPY-----MLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSID 123
LG Y + D ++ALDTMNFD +KG+ IR+MWSQRD LRKSG+GNVFIKNLD+SID
Sbjct: 51 LGYAYVNFLQLADAQKALDTMNFDLIKGKSIRLMWSQRDAYLRKSGIGNVFIKNLDRSID 110
Query: 124 NKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFV 183
NK +Y+ FSAFG ILS KV D+ G S+GY FVHF+ + AA+++IE++NG LL +FV
Sbjct: 111 NKTLYEHFSAFGKILSSKVMSDDHG-SRGYAFVHFQNQIAADRAIEEMNGALLKDCRLFV 169
Query: 184 GKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKS 242
G+F RK+RE E KA FTNVYIKNFG++ +DE+L E+F YG S +VM ++ GKS
Sbjct: 170 GRFKSRKDREAEFQNKAHEFTNVYIKNFGDEMDDERLNEVFSKYGKTLSVKVMTDSSGKS 229
Query: 243 RGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNR 302
+GFGFV+++S E A++AV+ NGK+++G++L+VGRAQKKAER ELK+ FE LK ER R
Sbjct: 230 KGFGFVSFDSHEAAKRAVEEMNGKDINGQLLFVGRAQKKAERQAELKQMFEQLKHERFRR 289
Query: 303 YQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
QG LY+KNLD++IDDE+LR+EF+ FG+I+ K
Sbjct: 290 CQGAKLYIKNLDETIDDEKLRREFSSFGSISRVK 323
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 69/179 (38%), Positives = 109/179 (60%), Gaps = 10/179 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV+IKN +D++ + + FS +G LS KV D G SKG+GFV F++ EAA +++E++
Sbjct: 191 NVYIKNFGDEMDDERLNEVFSKYGKTLSVKVMTDSSGKSKGFGFVSFDSHEAAKRAVEEM 250
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGE-----KAKLF-----TNVYIKNFGEDFNDEKLK 221
NG +N +++FVG+ + ER+ EL + K + F +YIKN E +DEKL+
Sbjct: 251 NGKDINGQLLFVGRAQKKAERQAELKQMFEQLKHERFRRCQGAKLYIKNLDETIDDEKLR 310
Query: 222 EMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
F +G+I+ +VM +G+S+GFG + + S E A KA+ NG+ + K L + AQK
Sbjct: 311 REFSSFGSISRVKVMQEEGRSKGFGLICFSSAEEATKAMTEMNGRILGSKPLNIALAQK 369
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 117/227 (51%), Gaps = 17/227 (7%)
Query: 111 GNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQD-EQGNSKGYGFVHFETEEAANKSIE 169
++++ +L + ++ FSA G +LS ++ +D S GY +V+F A K+++
Sbjct: 10 ASLYVGDLHADVTEDLLFKKFSAVGPVLSIRICRDLVTRRSLGYAYVNFLQLADAQKALD 69
Query: 170 KVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGT 229
+N L+ GK I +++ + NV+IKN +++ L E F +G
Sbjct: 70 TMNFDLIK------GKSIRLMWSQRDAYLRKSGIGNVFIKNLDRSIDNKTLYEHFSAFGK 123
Query: 230 ITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELK 289
I S +VM++D SRG+ FV +++ A++A++ NG + L+VGR + + +R E +
Sbjct: 124 ILSSKVMSDDHGSRGYAFVHFQNQIAADRAIEEMNGALLKDCRLFVGRFKSRKDREAEFQ 183
Query: 290 RRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ ++ N+Y+KN D +DDERL + F+ +G S K
Sbjct: 184 NK----------AHEFTNVYIKNFGDEMDDERLNEVFSKYGKTLSVK 220
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 56/87 (64%), Gaps = 2/87 (2%)
Query: 94 IRIMWSQ-RDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKG 152
++ M+ Q + R+ ++IKNLD++ID++ + FS+FGSI KV Q E+G SKG
Sbjct: 275 LKQMFEQLKHERFRRCQGAKLYIKNLDETIDDEKLRREFSSFGSISRVKVMQ-EEGRSKG 333
Query: 153 YGFVHFETEEAANKSIEKVNGMLLNSK 179
+G + F + E A K++ ++NG +L SK
Sbjct: 334 FGLICFSSAEEATKAMTEMNGRILGSK 360
>gi|302683360|ref|XP_003031361.1| hypothetical protein SCHCODRAFT_257452 [Schizophyllum commune H4-8]
gi|300105053|gb|EFI96458.1| hypothetical protein SCHCODRAFT_257452 [Schizophyllum commune H4-8]
Length = 624
Score = 326 bits (835), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 150/262 (57%), Positives = 202/262 (77%), Gaps = 1/262 (0%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D ERAL+ +N+ ++K RP RIMWSQRDP+LRK+G GN+FIKNLD+ IDNKA++DTF+AFG
Sbjct: 95 DGERALEQLNYSSIKNRPCRIMWSQRDPALRKTGQGNIFIKNLDEQIDNKALHDTFAAFG 154
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
++LSCKVA DE GNSKGYGFVH+ET EAA +I+ VNGMLLN K V+VG I RKER+ +
Sbjct: 155 NVLSCKVATDEHGNSKGYGFVHYETAEAAENAIKSVNGMLLNDKKVYVGPHISRKERQSK 214
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPE 254
+ E FTN+Y+KN + DE+ + +F+ YG + S + +D G++ GFGFV +E+ E
Sbjct: 215 IDEMRAHFTNLYVKNIDPEVTDEEFENLFKQYGQVQSSLLKRDDQGRNLGFGFVNFETHE 274
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A+KAV A + + G+ LYV RAQKKAER EL+++++ + ER+N+YQGVNLY+KNL+
Sbjct: 275 EAQKAVDALHESDFHGRKLYVARAQKKAEREAELRKQYDQARQERMNKYQGVNLYIKNLE 334
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
D +DDE+LR EF PFGTITS +
Sbjct: 335 DDVDDEKLRAEFEPFGTITSCR 356
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 75/202 (37%), Positives = 122/202 (60%), Gaps = 11/202 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
N+++KN+D + ++ + F +G + S + +D+QG + G+GFV+FET E A K+++ +
Sbjct: 224 NLYVKNIDPEVTDEEFENLFKQYGQVQSSLLKRDDQGRNLGFGFVNFETHEEAQKAVDAL 283
Query: 172 NGMLLNSKIVFVGKFIPRKEREKEL--------GEKAKLF--TNVYIKNFGEDFNDEKLK 221
+ + + ++V + + ERE EL E+ + N+YIKN +D +DEKL+
Sbjct: 284 HESDFHGRKLYVARAQKKAEREAELRKQYDQARQERMNKYQGVNLYIKNLEDDVDDEKLR 343
Query: 222 EMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
FEP+GTITS RVM ++ GKS+GFGFV Y +P+ A KAV N K + K LYV AQ+
Sbjct: 344 AEFEPFGTITSCRVMRDERGKSKGFGFVCYSAPDEATKAVAEMNNKMIGSKPLYVSLAQR 403
Query: 281 KAERTQELKRRFEMLKIERLNR 302
K R Q+L+ + + R+ +
Sbjct: 404 KEIRRQQLESQIAQRQQLRMQQ 425
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 83/148 (56%), Gaps = 22/148 (14%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQ----RDPSLRKS-------------GVGNVFIKNL 118
+ ++A+D ++ GR + + +Q R+ LRK GV N++IKNL
Sbjct: 275 EAQKAVDALHESDFHGRKLYVARAQKKAEREAELRKQYDQARQERMNKYQGV-NLYIKNL 333
Query: 119 DKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNS 178
+ +D++ + F FG+I SC+V +DE+G SKG+GFV + + A K++ ++N ++ S
Sbjct: 334 EDDVDDEKLRAEFEPFGTITSCRVMRDERGKSKGFGFVCYSAPDEATKAVAEMNNKMIGS 393
Query: 179 KIVFVG----KFIPRKEREKELGEKAKL 202
K ++V K I R++ E ++ ++ +L
Sbjct: 394 KPLYVSLAQRKEIRRQQLESQIAQRQQL 421
Score = 41.6 bits (96), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 31/142 (21%), Positives = 58/142 (40%), Gaps = 18/142 (12%)
Query: 197 GEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPE 254
G ++Y+ + L E+F G + S RV + +S G+ +V Y +
Sbjct: 35 GANTATSASLYVGELDPTVTESMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNAA 94
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
E+A++ N + + + +Q+ L + N+++KNLD
Sbjct: 95 DGERALEQLNYSSIKNRPCRIMWSQRDPA----------------LRKTGQGNIFIKNLD 138
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
+ ID++ L F FG + S K
Sbjct: 139 EQIDNKALHDTFAAFGNVLSCK 160
>gi|409045875|gb|EKM55355.1| hypothetical protein PHACADRAFT_255926 [Phanerochaete carnosa
HHB-10118-sp]
Length = 672
Score = 326 bits (835), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 153/262 (58%), Positives = 203/262 (77%), Gaps = 1/262 (0%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D ERAL+ +N+ +KGR RIMWSQRDP+LRK+G GN+FIKNLD++IDNKA++DTF+AFG
Sbjct: 102 DGERALEQLNYSLIKGRACRIMWSQRDPALRKTGQGNIFIKNLDEAIDNKALHDTFAAFG 161
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
++LSCKVA DEQG SKGYGFVH+ET EAA +I+ VNGMLLN K V+VG I +KER+ +
Sbjct: 162 NVLSCKVATDEQGRSKGYGFVHYETAEAAETAIKAVNGMLLNDKKVYVGHHISKKERQSK 221
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGKSRGFGFVAYESPE 254
L E FTN+Y+KN + + E+ ++FE +G +TS + + +G S+GFGFV +E E
Sbjct: 222 LDEIRAQFTNIYVKNLDPEVSLEEFTQLFEQFGNVTSAVIQTDEEGNSKGFGFVNFEFHE 281
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A+ AV + E +G+ L+V RAQKKAER +EL++ +E K+E++++YQGVNLY+KNLD
Sbjct: 282 EAQNAVDGLHDTEYNGRKLFVSRAQKKAEREEELRKSYEHAKMEKMSKYQGVNLYIKNLD 341
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
D IDDERLR EF PFGTITSAK
Sbjct: 342 DEIDDERLRAEFEPFGTITSAK 363
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 76/192 (39%), Positives = 117/192 (60%), Gaps = 11/192 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
N+++KNLD + + F FG++ S + DE+GNSKG+GFV+FE E A +++ +
Sbjct: 231 NIYVKNLDPEVSLEEFTQLFEQFGNVTSAVIQTDEEGNSKGFGFVNFEFHEEAQNAVDGL 290
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELG---EKAKL-------FTNVYIKNFGEDFNDEKLK 221
+ N + +FV + + ERE+EL E AK+ N+YIKN ++ +DE+L+
Sbjct: 291 HDTEYNGRKLFVSRAQKKAEREEELRKSYEHAKMEKMSKYQGVNLYIKNLDDEIDDERLR 350
Query: 222 EMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
FEP+GTITS +VM ++ G S+GFGFV + SP+ A KAV N K + K LYV AQ+
Sbjct: 351 AEFEPFGTITSAKVMRDEKGSSKGFGFVCFSSPDEATKAVAEMNNKMIGAKPLYVSLAQR 410
Query: 281 KAERTQELKRRF 292
+ R Q+L+ +
Sbjct: 411 REVRRQQLESQI 422
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 78/138 (56%), Gaps = 18/138 (13%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQ----RDPSLRKS-------------GVGNVFIKNL 118
+ + A+D ++ GR + + +Q R+ LRKS GV N++IKNL
Sbjct: 282 EAQNAVDGLHDTEYNGRKLFVSRAQKKAEREEELRKSYEHAKMEKMSKYQGV-NLYIKNL 340
Query: 119 DKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNS 178
D ID++ + F FG+I S KV +DE+G+SKG+GFV F + + A K++ ++N ++ +
Sbjct: 341 DDEIDDERLRAEFEPFGTITSAKVMRDEKGSSKGFGFVCFSSPDEATKAVAEMNNKMIGA 400
Query: 179 KIVFVGKFIPRKEREKEL 196
K ++V R+ R ++L
Sbjct: 401 KPLYVSLAQRREVRRQQL 418
Score = 44.3 bits (103), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 63/135 (46%), Gaps = 18/135 (13%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQ 261
++Y+ ++ L E+F G + S RV + +S G+ +V Y + E+A++
Sbjct: 49 ASLYVGELDPTVSEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNAADGERALE 108
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDER 321
N + G+ + +Q R L++ QG N+++KNLD++ID++
Sbjct: 109 QLNYSLIKGRACRIMWSQ----RDPALRKTG-----------QG-NIFIKNLDEAIDNKA 152
Query: 322 LRKEFTPFGTITSAK 336
L F FG + S K
Sbjct: 153 LHDTFAAFGNVLSCK 167
>gi|336364894|gb|EGN93247.1| hypothetical protein SERLA73DRAFT_172163 [Serpula lacrymans var.
lacrymans S7.3]
Length = 684
Score = 325 bits (834), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 155/262 (59%), Positives = 200/262 (76%), Gaps = 1/262 (0%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D ERAL+ +N+ +K R RIMWSQRDP+LRK+G GN+FIKNLD+ IDNKA++DTF+AFG
Sbjct: 97 DGERALEQLNYSLIKNRACRIMWSQRDPALRKTGQGNIFIKNLDEQIDNKALHDTFAAFG 156
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
++LSCKVA DE G SKGYGFVH+ET EAA +I+ VNGMLLN K V+VG I RKER+ +
Sbjct: 157 NVLSCKVATDEHGRSKGYGFVHYETGEAAETAIKAVNGMLLNDKKVYVGYHISRKERQSK 216
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRV-MNNDGKSRGFGFVAYESPE 254
L E FTN+YIKN ++ +EMF+ YG +TS V ++ +G S+GFGFV YE E
Sbjct: 217 LDEMKAQFTNLYIKNLDTSVTQDEFEEMFQKYGNVTSAIVQVDEEGNSKGFGFVNYEHHE 276
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A+ AV A + ++ GK L+V RAQKKAER +EL+R +E K+E+L++YQGVNLY+KNL+
Sbjct: 277 EAQSAVDALHDTDIRGKKLFVSRAQKKAEREEELRRSYEQAKMEKLSKYQGVNLYIKNLE 336
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
D +DDE+LR EF PFGTITS K
Sbjct: 337 DDVDDEKLRAEFEPFGTITSCK 358
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 79/192 (41%), Positives = 118/192 (61%), Gaps = 11/192 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
N++IKNLD S+ + F +G++ S V DE+GNSKG+GFV++E E A +++ +
Sbjct: 226 NLYIKNLDTSVTQDEFEEMFQKYGNVTSAIVQVDEEGNSKGFGFVNYEHHEEAQSAVDAL 285
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELG---EKAKL-------FTNVYIKNFGEDFNDEKLK 221
+ + K +FV + + ERE+EL E+AK+ N+YIKN +D +DEKL+
Sbjct: 286 HDTDIRGKKLFVSRAQKKAEREEELRRSYEQAKMEKLSKYQGVNLYIKNLEDDVDDEKLR 345
Query: 222 EMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
FEP+GTITS +VM +D S+GFGFV + SP+ A KAV N K + K LYV AQ+
Sbjct: 346 AEFEPFGTITSCKVMRDDKSTSKGFGFVCFSSPDEATKAVAEMNNKMIGSKPLYVSLAQR 405
Query: 281 KAERTQELKRRF 292
+ R Q+L+ +
Sbjct: 406 REVRRQQLESQI 417
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 79/138 (57%), Gaps = 18/138 (13%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQ----RDPSLRKS-------------GVGNVFIKNL 118
+ + A+D ++ ++G+ + + +Q R+ LR+S GV N++IKNL
Sbjct: 277 EAQSAVDALHDTDIRGKKLFVSRAQKKAEREEELRRSYEQAKMEKLSKYQGV-NLYIKNL 335
Query: 119 DKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNS 178
+ +D++ + F FG+I SCKV +D++ SKG+GFV F + + A K++ ++N ++ S
Sbjct: 336 EDDVDDEKLRAEFEPFGTITSCKVMRDDKSTSKGFGFVCFSSPDEATKAVAEMNNKMIGS 395
Query: 179 KIVFVGKFIPRKEREKEL 196
K ++V R+ R ++L
Sbjct: 396 KPLYVSLAQRREVRRQQL 413
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 59/133 (44%), Gaps = 18/133 (13%)
Query: 206 VYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQAW 263
+Y+ + L E+F G + S RV + +S G+ +V Y + E+A++
Sbjct: 46 LYVGELDPTVTEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNTSDGERALEQL 105
Query: 264 NGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLR 323
N + + + +Q R L++ QG N+++KNLD+ ID++ L
Sbjct: 106 NYSLIKNRACRIMWSQ----RDPALRKTG-----------QG-NIFIKNLDEQIDNKALH 149
Query: 324 KEFTPFGTITSAK 336
F FG + S K
Sbjct: 150 DTFAAFGNVLSCK 162
>gi|74137801|dbj|BAE24074.1| unnamed protein product [Mus musculus]
Length = 550
Score = 325 bits (834), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 161/226 (71%), Positives = 189/226 (83%), Gaps = 2/226 (0%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NVFIKNLDKSIDNKA+YDTFSAFG+ILSCKV DE G SKGY FVHFET+EAA+K+IEK+
Sbjct: 1 NVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKM 59
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTIT 231
NG+LLN + VFVG+F RKERE ELG KAK FTNVYIKNFGE+ +D LKE+F +G
Sbjct: 60 NGLLLNDRKVFVGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDGNLKELFSQFGKTL 119
Query: 232 SYRVM-NNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKR 290
S +VM ++ GKSRGFGFV+YE E A KAV NGKE+ GK ++VGRAQKK ER ELKR
Sbjct: 120 SVKVMRDSSGKSRGFGFVSYEKHEDANKAVDEMNGKEMSGKAIFVGRAQKKVERQAELKR 179
Query: 291 RFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+FE LK ER++RYQGVNLY+KNLDD+IDDE+LRKEF+PFG+ITSAK
Sbjct: 180 KFEQLKQERISRYQGVNLYIKNLDDTIDDEKLRKEFSPFGSITSAK 225
Score = 154 bits (389), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 81/191 (42%), Positives = 118/191 (61%), Gaps = 10/191 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV+IKN + +D+ + + FS FG LS KV +D G S+G+GFV +E E ANK+++++
Sbjct: 93 NVYIKNFGEEVDDGNLKELFSQFGKTLSVKVMRDSSGKSRGFGFVSYEKHEDANKAVDEM 152
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKLK 221
NG ++ K +FVG+ + ER+ EL K + N+YIKN + +DEKL+
Sbjct: 153 NGKEMSGKAIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLR 212
Query: 222 EMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKK 281
+ F P+G+ITS +VM DG+S+GFGFV + S E A KAV NG+ V K LYV AQ+K
Sbjct: 213 KEFSPFGSITSAKVMLEDGRSKGFGFVCFPSREEATKAVTEMNGRIVGSKPLYVALAQRK 272
Query: 282 AERTQELKRRF 292
ER L ++
Sbjct: 273 EERKAHLTNQY 283
>gi|307207781|gb|EFN85399.1| Polyadenylate-binding protein 1 [Harpegnathos saltator]
Length = 552
Score = 325 bits (833), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 165/257 (64%), Positives = 187/257 (72%), Gaps = 29/257 (11%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD +KGRPIRIMWSQRDPSLRKSGVGNVFIKNLDK+I
Sbjct: 53 GYAYVNFQQP--ADAERALDTMNFDMIKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKNI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKAMYDTFSAFG+ILSCKVAQDE G SKGYGFVHFETEEAANKSI+KVNGMLLN K V+
Sbjct: 111 DNKAMYDTFSAFGNILSCKVAQDESGASKGYGFVHFETEEAANKSIDKVNGMLLNGKKVY 170
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNF---------------------------GEDF 215
VGKFIPRKEREKELGEKAKLFTNVY+KNF +
Sbjct: 171 VGKFIPRKEREKELGEKAKLFTNVYVKNFELKRKFEQLKIERLNRYQGVNLYVKNLDDTI 230
Query: 216 NDEKLKEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYV 275
+DE+L++ F P+GTITS +VM +G+S+GFGFV + PE A KAV NG+ V K LYV
Sbjct: 231 DDERLRKEFTPFGTITSAKVMMEEGRSKGFGFVCFSQPEEATKAVTEMNGRIVGSKPLYV 290
Query: 276 GRAQKKAERTQELKRRF 292
AQ+K +R L ++
Sbjct: 291 ALAQRKEDRKAHLASQY 307
Score = 167 bits (423), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 96/254 (37%), Positives = 151/254 (59%), Gaps = 25/254 (9%)
Query: 102 DPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFET 160
+P + ++++ +L I +++ FS+ G +LS +V +D S GY +V+F+
Sbjct: 2 NPGAPNYPMASLYVGDLHTDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 161 EEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKL 220
A ++++ +N ++ + + I +R+ L + NV+IKN ++ +++ +
Sbjct: 62 PADAERALDTMNFDMIKGRPIR----IMWSQRDPSLRKSG--VGNVFIKNLDKNIDNKAM 115
Query: 221 KEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQ 279
+ F +G I S +V ++ G S+G+GFV +E+ E A K++ NG ++GK +YVG+
Sbjct: 116 YDTFSAFGNILSCKVAQDESGASKGYGFVHFETEEAANKSIDKVNGMLLNGKKVYVGKFI 175
Query: 280 KKAERTQEL-----------------KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERL 322
+ ER +EL KR+FE LKIERLNRYQGVNLYVKNLDD+IDDERL
Sbjct: 176 PRKEREKELGEKAKLFTNVYVKNFELKRKFEQLKIERLNRYQGVNLYVKNLDDTIDDERL 235
Query: 323 RKEFTPFGTITSAK 336
RKEFTPFGTITSAK
Sbjct: 236 RKEFTPFGTITSAK 249
>gi|403271841|ref|XP_003927812.1| PREDICTED: LOW QUALITY PROTEIN: polyadenylate-binding protein
4-like [Saimiri boliviensis boliviensis]
Length = 647
Score = 325 bits (832), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 157/265 (59%), Positives = 208/265 (78%), Gaps = 2/265 (0%)
Query: 73 YMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFS 132
++ D ++ALDTMNFD ++G+ IR+MWSQRD LR+SG+GNVFIKNLDKSIDNK +Y+ FS
Sbjct: 337 HLADAQKALDTMNFDVIQGKSIRLMWSQRDAYLRRSGIGNVFIKNLDKSIDNKTLYEHFS 396
Query: 133 AFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKER 192
AFG ILS KV D+QG SKGY FVHF+ + AA+++IE++NG LL VFVG+F R++R
Sbjct: 397 AFGRILSSKVMSDDQG-SKGYAFVHFQNQSAADRAIEEMNGKLLQGCKVFVGRFKSRQDR 455
Query: 193 EKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYE 251
E EL KA FTNVYIKNFG D +DE+LK++F YG S +VM ++ GKS+GFGFV+++
Sbjct: 456 EAELRSKASEFTNVYIKNFGGDMDDERLKDVFSKYGKTLSVKVMTDSSGKSKGFGFVSFD 515
Query: 252 SPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVK 311
S E A+KAV+ NG++++G++++V RAQKK ER ELK+ FE LK ER+ Q V LYVK
Sbjct: 516 SHEAAKKAVEEMNGRDINGQLIFVARAQKKVERQAELKQMFEQLKNERIRGCQVVKLYVK 575
Query: 312 NLDDSIDDERLRKEFTPFGTITSAK 336
NLDD+IDDE+LRKEF+ FG+I+ K
Sbjct: 576 NLDDTIDDEKLRKEFSSFGSISRVK 600
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 79/220 (35%), Positives = 127/220 (57%), Gaps = 16/220 (7%)
Query: 77 TERALDTMNFDALKGRPI---RIMWSQ-RDPSLRK--SGVGNVFIKNLDKSIDNKAMYDT 130
+RA++ MN L+G + R Q R+ LR S NV+IKN +D++ + D
Sbjct: 427 ADRAIEEMNGKLLQGCKVFVGRFKSRQDREAELRSKASEFTNVYIKNFGGDMDDERLKDV 486
Query: 131 FSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRK 190
FS +G LS KV D G SKG+GFV F++ EAA K++E++NG +N +++FV + +
Sbjct: 487 FSKYGKTLSVKVMTDSSGKSKGFGFVSFDSHEAAKKAVEEMNGRDINGQLIFVARAQKKV 546
Query: 191 EREKELGEKAKLFTN----------VYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDG 240
ER+ EL + + N +Y+KN + +DEKL++ F +G+I+ +VM +G
Sbjct: 547 ERQAELKQMFEQLKNERIRGCQVVKLYVKNLDDTIDDEKLRKEFSSFGSISRVKVMQEEG 606
Query: 241 KSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
+S+GFG + + SPE A KA+ NG+ + K L + AQ+
Sbjct: 607 QSKGFGLICFSSPEDALKAMTEMNGRILGSKPLSIALAQR 646
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 120/228 (52%), Gaps = 17/228 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + ++ FSA G +LS ++ +D+ S GY +V+F A K++
Sbjct: 286 MASLYVGDLHADVTEDLLFRKFSAAGPVLSIRICRDQLTRRSLGYAYVNFLHLADAQKAL 345
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N ++ GK I +++ + NV+IKN + +++ L E F +G
Sbjct: 346 DTMNFDVIQ------GKSIRLMWSQRDAYLRRSGIGNVFIKNLDKSIDNKTLYEHFSAFG 399
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S +VM++D S+G+ FV +++ A++A++ NGK + G ++VGR + + +R EL
Sbjct: 400 RILSSKVMSDDQGSKGYAFVHFQNQSAADRAIEEMNGKLLQGCKVFVGRFKSRQDREAEL 459
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ + N+Y+KN +DDERL+ F+ +G S K
Sbjct: 460 RSKASEF----------TNVYIKNFGGDMDDERLKDVFSKYGKTLSVK 497
>gi|7528270|gb|AAF63202.1|AF240679_1 poly(A)-binding protein [Cucumis sativus]
Length = 649
Score = 324 bits (830), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 163/263 (61%), Positives = 204/263 (77%), Gaps = 3/263 (1%)
Query: 75 LDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAF 134
+D RALD +NF L G PIR+M+S RDPS+RKSG GN+FIKNLDK+ID+KA++DTFSAF
Sbjct: 81 VDASRALDVLNFTPLNGNPIRVMYSHRDPSVRKSGSGNIFIKNLDKAIDHKALHDTFSAF 140
Query: 135 GSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREK 194
GSILSCKVA D G SKG+GFV F+TEEAA K+IEK+NGMLLN K VFVG F+ ++ERE
Sbjct: 141 GSILSCKVATDSSGQSKGFGFVQFDTEEAALKAIEKLNGMLLNDKQVFVGPFLRKQERES 200
Query: 195 ELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESP 253
+ EK K F NV++KN E ++E LK MF +G ITS VM + +GKS+ FGFV +E+
Sbjct: 201 -VSEKTK-FNNVFVKNLAETTSEEDLKNMFGEFGPITSVVVMRDGEGKSKCFGFVNFENA 258
Query: 254 EFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNL 313
+ A ++V+A NGK+VDGK YVG+AQKK+ER ELK RFE E ++YQG NLYVKNL
Sbjct: 259 DDAARSVEALNGKKVDGKEWYVGKAQKKSEREVELKSRFEQSVKEAADKYQGANLYVKNL 318
Query: 314 DDSIDDERLRKEFTPFGTITSAK 336
DDSIDD++L++ FT FGTITS K
Sbjct: 319 DDSIDDDKLKELFTGFGTITSCK 341
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 81/208 (38%), Positives = 124/208 (59%), Gaps = 11/208 (5%)
Query: 100 QRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFE 159
+R+ K+ NVF+KNL ++ + + + F FG I S V +D +G SK +GFV+FE
Sbjct: 197 ERESVSEKTKFNNVFVKNLAETTSEEDLKNMFGEFGPITSVVVMRDGEGKSKCFGFVNFE 256
Query: 160 TEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELG--------EKAKLF--TNVYIK 209
+ A +S+E +NG ++ K +VGK + ERE EL E A + N+Y+K
Sbjct: 257 NADDAARSVEALNGKKVDGKEWYVGKAQKKSEREVELKSRFEQSVKEAADKYQGANLYVK 316
Query: 210 NFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGKSRGFGFVAYESPEFAEKAVQAWNGKEV 268
N + +D+KLKE+F +GTITS +VM + +G SRG GFVA+ SPE A +A+ NG+ +
Sbjct: 317 NLDDSIDDDKLKELFTGFGTITSCKVMRDPNGISRGSGFVAFSSPEEAARALAEMNGRMI 376
Query: 269 DGKILYVGRAQKKAERTQELKRRFEMLK 296
K LYV AQ+K +R L+ +F ++
Sbjct: 377 VSKPLYVALAQRKEDRIARLQAQFSQMQ 404
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 123/226 (54%), Gaps = 22/226 (9%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQD-EQGNSKGYGFVHFETEEAANKSIEK 170
++++ +LD ++ + +YD F+ G ++S +V +D S GYG+V++ A+++++
Sbjct: 30 SLYVGDLDVNVTDSQLYDLFNQVGQVVSVRVCRDLTSRRSLGYGYVNYSNPVDASRALDV 89
Query: 171 VNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTI 230
+N LN + V + R ++ G N++IKN + + + L + F +G+I
Sbjct: 90 LNFTPLNGNPIRV-MYSHRDPSVRKSGSG-----NIFIKNLDKAIDHKALHDTFSAFGSI 143
Query: 231 TSYRV-MNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAER-TQEL 288
S +V ++ G+S+GFGFV +++ E A KA++ NG ++ K ++VG +K ER +
Sbjct: 144 LSCKVATDSSGQSKGFGFVQFDTEEAALKAIEKLNGMLLNDKQVFVGPFLRKQERESVSE 203
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITS 334
K +F N++VKNL ++ +E L+ F FG ITS
Sbjct: 204 KTKFN-------------NVFVKNLAETTSEEDLKNMFGEFGPITS 236
>gi|449438385|ref|XP_004136969.1| PREDICTED: polyadenylate-binding protein 2-like [Cucumis sativus]
gi|449495630|ref|XP_004159899.1| PREDICTED: polyadenylate-binding protein 2-like [Cucumis sativus]
Length = 649
Score = 324 bits (830), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 163/263 (61%), Positives = 204/263 (77%), Gaps = 3/263 (1%)
Query: 75 LDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAF 134
+D RALD +NF L G PIR+M+S RDPS+RKSG GN+FIKNLDK+ID+KA++DTFSAF
Sbjct: 81 VDASRALDVLNFTPLNGNPIRVMYSHRDPSVRKSGSGNIFIKNLDKAIDHKALHDTFSAF 140
Query: 135 GSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREK 194
GSILSCKVA D G SKG+GFV F+TEEAA K+IEK+NGMLLN K VFVG F+ ++ERE
Sbjct: 141 GSILSCKVATDSSGQSKGFGFVQFDTEEAALKAIEKLNGMLLNDKQVFVGPFLRKQERES 200
Query: 195 ELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESP 253
+ EK K F NV++KN E ++E LK MF +G ITS VM + +GKS+ FGFV +E+
Sbjct: 201 -VSEKTK-FNNVFVKNLAETTSEEDLKNMFGEFGPITSVVVMRDGEGKSKCFGFVNFENA 258
Query: 254 EFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNL 313
+ A ++V+A NGK+VDGK YVG+AQKK+ER ELK RFE E ++YQG NLYVKNL
Sbjct: 259 DDAARSVEALNGKKVDGKEWYVGKAQKKSEREVELKSRFEQSVKEAADKYQGANLYVKNL 318
Query: 314 DDSIDDERLRKEFTPFGTITSAK 336
DDSIDD++L++ FT FGTITS K
Sbjct: 319 DDSIDDDKLKELFTGFGTITSCK 341
Score = 138 bits (348), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 81/208 (38%), Positives = 124/208 (59%), Gaps = 11/208 (5%)
Query: 100 QRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFE 159
+R+ K+ NVF+KNL ++ + + + F FG I S V +D +G SK +GFV+FE
Sbjct: 197 ERESVSEKTKFNNVFVKNLAETTSEEDLKNMFGEFGPITSVVVMRDGEGKSKCFGFVNFE 256
Query: 160 TEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELG--------EKAKLF--TNVYIK 209
+ A +S+E +NG ++ K +VGK + ERE EL E A + N+Y+K
Sbjct: 257 NADDAARSVEALNGKKVDGKEWYVGKAQKKSEREVELKSRFEQSVKEAADKYQGANLYVK 316
Query: 210 NFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGKSRGFGFVAYESPEFAEKAVQAWNGKEV 268
N + +D+KLKE+F +GTITS +VM + +G SRG GFVA+ SPE A +A+ NG+ +
Sbjct: 317 NLDDSIDDDKLKELFTGFGTITSCKVMRDPNGISRGSGFVAFSSPEEAARALAEMNGRMI 376
Query: 269 DGKILYVGRAQKKAERTQELKRRFEMLK 296
K LYV AQ+K +R L+ +F ++
Sbjct: 377 VSKPLYVALAQRKEDRRARLQAQFSQMQ 404
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 123/226 (54%), Gaps = 22/226 (9%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQD-EQGNSKGYGFVHFETEEAANKSIEK 170
++++ +LD ++ + +YD F+ G ++S +V +D S GYG+V++ A+++++
Sbjct: 30 SLYVGDLDVNVTDSQLYDLFNQVGQVVSVRVCRDLTSRRSLGYGYVNYSNPVDASRALDV 89
Query: 171 VNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTI 230
+N LN + V + R ++ G N++IKN + + + L + F +G+I
Sbjct: 90 LNFTPLNGNPIRV-MYSHRDPSVRKSGS-----GNIFIKNLDKAIDHKALHDTFSAFGSI 143
Query: 231 TSYRV-MNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAER-TQEL 288
S +V ++ G+S+GFGFV +++ E A KA++ NG ++ K ++VG +K ER +
Sbjct: 144 LSCKVATDSSGQSKGFGFVQFDTEEAALKAIEKLNGMLLNDKQVFVGPFLRKQERESVSE 203
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITS 334
K +F N++VKNL ++ +E L+ F FG ITS
Sbjct: 204 KTKFN-------------NVFVKNLAETTSEEDLKNMFGEFGPITS 236
>gi|406602185|emb|CCH46236.1| Polyadenylate-binding protein, cytoplasmic and nuclear
[Wickerhamomyces ciferrii]
Length = 652
Score = 324 bits (830), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 153/262 (58%), Positives = 207/262 (79%), Gaps = 1/262 (0%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D E+A+D +N+ +KG+PIRIMWSQRDP+ R++G GNVFIKNL +IDNKA++DTFSAFG
Sbjct: 113 DGEKAIDELNYSVVKGQPIRIMWSQRDPAKRRNGEGNVFIKNLHPAIDNKALHDTFSAFG 172
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
ILSCKVA D G SKG+GFVHFE+ EAA +IE VNGMLLN+ V+VG + R++R+ +
Sbjct: 173 RILSCKVATDNFGQSKGFGFVHFESPEAAQAAIENVNGMLLNNNEVYVGPHVARRDRQSK 232
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGKSRGFGFVAYESPE 254
L E K FTNVY+KN + ++E++KE+F P+GT+TS+ + + +GKSRGF FV YE E
Sbjct: 233 LEEVIKSFTNVYVKNIDLEASEEEVKELFTPFGTVTSFYLEKDAEGKSRGFAFVNYEEHE 292
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A K++++ N ++ GK LYVGRAQKK+ER +ELK+++E +IE+L + QGVNL+VKNLD
Sbjct: 293 AAVKSIESLNDQDYKGKKLYVGRAQKKSERLEELKKQYEAARIEKLTKSQGVNLFVKNLD 352
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
DSIDDE+L++EF FGTI+S K
Sbjct: 353 DSIDDEKLKEEFQSFGTISSVK 374
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 75/202 (37%), Positives = 122/202 (60%), Gaps = 11/202 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV++KN+D + + + F+ FG++ S + +D +G S+G+ FV++E EAA KSIE +
Sbjct: 242 NVYVKNIDLEASEEEVKELFTPFGTVTSFYLEKDAEGKSRGFAFVNYEEHEAAVKSIESL 301
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELG---EKAKL-------FTNVYIKNFGEDFNDEKLK 221
N K ++VG+ + ER +EL E A++ N+++KN + +DEKLK
Sbjct: 302 NDQDYKGKKLYVGRAQKKSERLEELKKQYEAARIEKLTKSQGVNLFVKNLDDSIDDEKLK 361
Query: 222 EMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
E F+ +GTI+S +VM + GKS+GFGFV++ SPE A +A+ N + GK LYV AQ+
Sbjct: 362 EEFQSFGTISSVKVMIDESGKSKGFGFVSFSSPEEASRAISEMNQHMLAGKPLYVALAQR 421
Query: 281 KAERTQELKRRFEMLKIERLNR 302
K R +L+++ + RL +
Sbjct: 422 KDVRRSQLEQQIQARNQLRLQQ 443
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 65/102 (63%), Gaps = 4/102 (3%)
Query: 105 LRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAA 164
L KS N+F+KNLD SID++ + + F +FG+I S KV DE G SKG+GFV F + E A
Sbjct: 338 LTKSQGVNLFVKNLDDSIDDEKLKEEFQSFGTISSVKVMIDESGKSKGFGFVSFSSPEEA 397
Query: 165 NKSIEKVNGMLLNSKIVFVG----KFIPRKEREKELGEKAKL 202
+++I ++N +L K ++V K + R + E+++ + +L
Sbjct: 398 SRAISEMNQHMLAGKPLYVALAQRKDVRRSQLEQQIQARNQL 439
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 65/135 (48%), Gaps = 18/135 (13%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQ 261
++Y+ N+ L E+F P G ++S RV + +S G+ +V Y + + EKA+
Sbjct: 60 ASLYVGELEPSINEALLFEIFSPIGQVSSIRVCRDALTKRSLGYAYVNYHNVKDGEKAID 119
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDER 321
N V G+ + + +Q+ KRR +G N+++KNL +ID++
Sbjct: 120 ELNYSVVKGQPIRIMWSQRDP-----AKRR----------NGEG-NVFIKNLHPAIDNKA 163
Query: 322 LRKEFTPFGTITSAK 336
L F+ FG I S K
Sbjct: 164 LHDTFSAFGRILSCK 178
>gi|213403408|ref|XP_002172476.1| polyadenylate-binding protein [Schizosaccharomyces japonicus
yFS275]
gi|212000523|gb|EEB06183.1| polyadenylate-binding protein [Schizosaccharomyces japonicus
yFS275]
Length = 662
Score = 323 bits (829), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 153/262 (58%), Positives = 200/262 (76%), Gaps = 1/262 (0%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D E+AL+ +N+ +KGR RIMWSQRDPSLRK+G GN+FIKNLD +IDNKA++DTFSAFG
Sbjct: 132 DGEKALEELNYSLIKGRACRIMWSQRDPSLRKTGTGNIFIKNLDPAIDNKALHDTFSAFG 191
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCKVA DE GNSKGYGFVHF + ++AN +IE VNGMLLN K V+VG + R++R+ +
Sbjct: 192 TILSCKVALDEYGNSKGYGFVHFASIDSANAAIEHVNGMLLNDKKVYVGHHVSRRDRQSK 251
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPE 254
FTNVYIKN + DE+ +FE +G ITS+ ++ ++ GK RGFGFV +ES E
Sbjct: 252 FEAMKANFTNVYIKNIDPEVTDEEFSGLFEKFGAITSFSLVKDESGKPRGFGFVNFESHE 311
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A+KAV N E GK LYVGRAQK+ ER EL++R+E +K+E++++YQGVNL++KNL
Sbjct: 312 AAQKAVDEMNDYEFHGKKLYVGRAQKRHEREAELRKRYEQMKLEKMSKYQGVNLFIKNLS 371
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
D +DD L+ EF+ FGTITSAK
Sbjct: 372 DEVDDNLLKTEFSAFGTITSAK 393
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 79/198 (39%), Positives = 120/198 (60%), Gaps = 11/198 (5%)
Query: 107 KSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANK 166
K+ NV+IKN+D + ++ F FG+I S + +DE G +G+GFV+FE+ EAA K
Sbjct: 256 KANFTNVYIKNIDPEVTDEEFSGLFEKFGAITSFSLVKDESGKPRGFGFVNFESHEAAQK 315
Query: 167 SIEKVNGMLLNSKIVFVGKFIPRKEREKELG---EKAKL-------FTNVYIKNFGEDFN 216
+++++N + K ++VG+ R ERE EL E+ KL N++IKN ++ +
Sbjct: 316 AVDEMNDYEFHGKKLYVGRAQKRHEREAELRKRYEQMKLEKMSKYQGVNLFIKNLSDEVD 375
Query: 217 DEKLKEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYV 275
D LK F +GTITS +VM ++ GKS+GFGFV Y SPE A KA+ N + + GK LYV
Sbjct: 376 DNLLKTEFSAFGTITSAKVMTDENGKSKGFGFVCYSSPEEATKAIAEMNQRMLAGKPLYV 435
Query: 276 GRAQKKAERTQELKRRFE 293
AQ+K R +L+ + +
Sbjct: 436 ALAQRKDVRRSQLEAQIQ 453
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 67/125 (53%), Gaps = 18/125 (14%)
Query: 77 TERALDTMNFDALKGRPIRIMWSQ----RDPSLRK-------------SGVGNVFIKNLD 119
++A+D MN G+ + + +Q R+ LRK GV N+FIKNL
Sbjct: 313 AQKAVDEMNDYEFHGKKLYVGRAQKRHEREAELRKRYEQMKLEKMSKYQGV-NLFIKNLS 371
Query: 120 KSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSK 179
+D+ + FSAFG+I S KV DE G SKG+GFV + + E A K+I ++N +L K
Sbjct: 372 DEVDDNLLKTEFSAFGTITSAKVMTDENGKSKGFGFVCYSSPEEATKAIAEMNQRMLAGK 431
Query: 180 IVFVG 184
++V
Sbjct: 432 PLYVA 436
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 62/135 (45%), Gaps = 18/135 (13%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQ 261
T++Y+ + L E+F G + S RV + +S G+ +V Y + + EKA++
Sbjct: 79 TSLYVGELDPSVTEAMLFEIFSTVGPVASIRVCRDAVTRQSLGYAYVNYHNADDGEKALE 138
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDER 321
N + G+ + +Q+ L + N+++KNLD +ID++
Sbjct: 139 ELNYSLIKGRACRIMWSQRDPS----------------LRKTGTGNIFIKNLDPAIDNKA 182
Query: 322 LRKEFTPFGTITSAK 336
L F+ FGTI S K
Sbjct: 183 LHDTFSAFGTILSCK 197
>gi|452984370|gb|EME84127.1| hypothetical protein MYCFIDRAFT_202901 [Pseudocercospora fijiensis
CIRAD86]
Length = 715
Score = 323 bits (829), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 157/262 (59%), Positives = 199/262 (75%), Gaps = 1/262 (0%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D ERAL+ +N+ +KG+P RIMWSQRDP+LRK+G GNVFIKNLD +IDNKA++DTF+AFG
Sbjct: 108 DGERALEELNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDAAIDNKALHDTFAAFG 167
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCKVA DE GNSKGYGFVH+ET +AAN++I+ VNGMLLN K VFVG IP+K+R +
Sbjct: 168 NILSCKVAVDEHGNSKGYGFVHYETSDAANQAIKSVNGMLLNEKKVFVGHHIPKKDRMSK 227
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPE 254
E FTN+Y+KN + D++ +E+FE YG ITS + ++D GK RGFGFV + E
Sbjct: 228 FEEMKANFTNIYVKNIDAETTDDEFRELFEKYGQITSASLAHDDQGKVRGFGFVNFIRHE 287
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A KAV N + G+ LYVGRAQKK ER +EL++++E + E+ +YQGVNLYVKNL
Sbjct: 288 DAAKAVDELNDLDFKGQKLYVGRAQKKHEREEELRKQYEAQRQEKSAKYQGVNLYVKNLA 347
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
D IDDE LRK F P+G ITSAK
Sbjct: 348 DEIDDEELRKIFEPYGAITSAK 369
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 104/244 (42%), Gaps = 58/244 (23%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQ----RDPSLRKS-------------GVGNVFIKNL 118
D +A+D +N KG+ + + +Q R+ LRK GV N+++KNL
Sbjct: 288 DAAKAVDELNDLDFKGQKLYVGRAQKKHEREEELRKQYEAQRQEKSAKYQGV-NLYVKNL 346
Query: 119 DKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNS 178
ID++ + F +G+I S KV +D ++KV G
Sbjct: 347 ADEIDDEELRKIFEPYGAITSAKVMRD-------------------TTPLDKVEGA---- 383
Query: 179 KIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN 238
EKE GEK + ++ K + + ++L + + +V+
Sbjct: 384 --------------EKEDGEKKESESSAEDKEEEKKDDADELAKKLDTVTIGGEKKVL-- 427
Query: 239 DGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIE 298
GKS+GFGFV + +P+ A KAV N K + K LYV AQ+K R +L+ +
Sbjct: 428 -GKSKGFGFVCFSNPDEATKAVTELNQKMIHSKPLYVALAQRKEVRKSQLEASIQARNQV 486
Query: 299 RLNR 302
R+ +
Sbjct: 487 RMQQ 490
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 61/135 (45%), Gaps = 18/135 (13%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQ 261
++Y+ + L E+F G + S RV + +S G+ +V Y S E+A++
Sbjct: 55 ASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNSAADGERALE 114
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDER 321
N + GK + +Q R L++ QG N+++KNLD +ID++
Sbjct: 115 ELNYTLIKGKPCRIMWSQ----RDPALRKTG-----------QG-NVFIKNLDAAIDNKA 158
Query: 322 LRKEFTPFGTITSAK 336
L F FG I S K
Sbjct: 159 LHDTFAAFGNILSCK 173
>gi|168053933|ref|XP_001779388.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669186|gb|EDQ55778.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 650
Score = 323 bits (828), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 161/262 (61%), Positives = 200/262 (76%), Gaps = 3/262 (1%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D RAL+ +NF L G PIRIM+S RDPS+RKSG N+FIKNLDK+IDNKA++DTFSAFG
Sbjct: 81 DATRALELLNFSVLNGNPIRIMFSHRDPSIRKSGTANIFIKNLDKTIDNKALHDTFSAFG 140
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
ILSCKVA D G SKGYGFV FE EE+A +IEKVNGMLLN K VFVG F+ R+ER++
Sbjct: 141 GILSCKVAVDGSGQSKGYGFVQFEQEESALTAIEKVNGMLLNDKQVFVGPFVRRQERDQS 200
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPE 254
G F NVY+KN GE+ ++ LK +F YGTI+S VM ++DGKS+ FGFV +E P+
Sbjct: 201 GG--VSKFNNVYVKNLGENTTEDDLKNVFGAYGTISSAVVMRDSDGKSKCFGFVNFEHPD 258
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A KAV+A NGK+ D K YVGRAQKK+ER EL+ +FE + ER+ +YQGVNLY+KNLD
Sbjct: 259 NAAKAVEALNGKKRDEKEWYVGRAQKKSEREAELRAKFEQERKERIEKYQGVNLYLKNLD 318
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
D++DDE+LR+ F +GTITS K
Sbjct: 319 DTVDDEKLRELFADYGTITSCK 340
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 86/210 (40%), Positives = 122/210 (58%), Gaps = 15/210 (7%)
Query: 100 QRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFE 159
+RD S S NV++KNL ++ + + F A+G+I S V +D G SK +GFV+FE
Sbjct: 196 ERDQSGGVSKFNNVYVKNLGENTTEDDLKNVFGAYGTISSAVVMRDSDGKSKCFGFVNFE 255
Query: 160 TEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKL------------FTNVY 207
+ A K++E +NG + K +VG+ + ERE EL +AK N+Y
Sbjct: 256 HPDNAAKAVEALNGKKRDEKEWYVGRAQKKSEREAEL--RAKFEQERKERIEKYQGVNLY 313
Query: 208 IKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGKSRGFGFVAYESPEFAEKAVQAWNGK 266
+KN + +DEKL+E+F YGTITS +VM + G+SRG GFVA+ SPE A +AV NGK
Sbjct: 314 LKNLDDTVDDEKLRELFADYGTITSCKVMRDPQGQSRGSGFVAFSSPEEATRAVTEMNGK 373
Query: 267 EVDGKILYVGRAQKKAERTQELKRRFEMLK 296
V K LYV AQ+K ER L+ F ++
Sbjct: 374 MVGSKPLYVALAQRKEERRARLQAAFAQMR 403
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 123/226 (54%), Gaps = 20/226 (8%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSIEK 170
++++ +L+ ++ +Y+ F+ G ++S +V +D S GY +V++ + + A +++E
Sbjct: 29 SLYVGDLEPNVSEAQLYELFTQVGQVVSIRVCRDLITRRSLGYAYVNYNSAQDATRALEL 88
Query: 171 VNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTI 230
+N +LN + + F R ++ G N++IKN + +++ L + F +G I
Sbjct: 89 LNFSVLNGNPIRI-MFSHRDPSIRKSGT-----ANIFIKNLDKTIDNKALHDTFSAFGGI 142
Query: 231 TSYRV-MNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELK 289
S +V ++ G+S+G+GFV +E E A A++ NG ++ K ++VG ++ ER Q
Sbjct: 143 LSCKVAVDGSGQSKGYGFVQFEQEESALTAIEKVNGMLLNDKQVFVGPFVRRQERDQS-- 200
Query: 290 RRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSA 335
+ + N N+YVKNL ++ ++ L+ F +GTI+SA
Sbjct: 201 -----GGVSKFN-----NVYVKNLGENTTEDDLKNVFGAYGTISSA 236
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 65/135 (48%), Gaps = 18/135 (13%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQ 261
T++Y+ + + ++ +L E+F G + S RV + +S G+ +V Y S + A +A++
Sbjct: 28 TSLYVGDLEPNVSEAQLYELFTQVGQVVSIRVCRDLITRRSLGYAYVNYNSAQDATRALE 87
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDER 321
N ++G + + + + + + N+++KNLD +ID++
Sbjct: 88 LLNFSVLNGNPIRIMFSHRDPS----------------IRKSGTANIFIKNLDKTIDNKA 131
Query: 322 LRKEFTPFGTITSAK 336
L F+ FG I S K
Sbjct: 132 LHDTFSAFGGILSCK 146
>gi|444321552|ref|XP_004181432.1| hypothetical protein TBLA_0F03780 [Tetrapisispora blattae CBS 6284]
gi|387514476|emb|CCH61913.1| hypothetical protein TBLA_0F03780 [Tetrapisispora blattae CBS 6284]
Length = 577
Score = 323 bits (828), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 151/258 (58%), Positives = 201/258 (77%), Gaps = 1/258 (0%)
Query: 80 ALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILS 139
A++ +N+ A+KGRP RIMWSQRDPS+RK G GN+FIKNL IDNK +Y+TFS FG+ILS
Sbjct: 100 AIEKLNYTAIKGRPCRIMWSQRDPSMRKKGSGNIFIKNLHPDIDNKTLYETFSVFGNILS 159
Query: 140 CKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEK 199
CK+A DE G SKG+GFVHFE EEAA ++I+ +NGMLLN + V+V + +K+R+ +L E
Sbjct: 160 CKIANDETGKSKGFGFVHFENEEAAREAIDAINGMLLNGQEVYVAPHVSKKDRQSKLDEA 219
Query: 200 AKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGKSRGFGFVAYESPEFAEK 258
FTNVY+KN + +E + +F+PYGTITS + + +GKSRGFGFV +E+ E A K
Sbjct: 220 RANFTNVYVKNLDLEATEEDFENLFKPYGTITSVALEKDAEGKSRGFGFVDFENHEDAVK 279
Query: 259 AVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSID 318
AV+A N E G+ LYVGRAQKK ER QELK++++ K+E+L +YQG+NL++KNLDDSID
Sbjct: 280 AVEALNDTEYKGQTLYVGRAQKKYERLQELKKQYQASKLEKLAKYQGINLFIKNLDDSID 339
Query: 319 DERLRKEFTPFGTITSAK 336
DE+L++EF PFGTITSA+
Sbjct: 340 DEKLKEEFAPFGTITSAR 357
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 83/231 (35%), Positives = 133/231 (57%), Gaps = 17/231 (7%)
Query: 80 ALDTMNFDALKGRPIRIMW--SQRDPSLR----KSGVGNVFIKNLDKSIDNKAMYDTFSA 133
A+D +N L G+ + + S++D + ++ NV++KNLD + + F
Sbjct: 187 AIDAINGMLLNGQEVYVAPHVSKKDRQSKLDEARANFTNVYVKNLDLEATEEDFENLFKP 246
Query: 134 FGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKERE 193
+G+I S + +D +G S+G+GFV FE E A K++E +N + ++VG+ + ER
Sbjct: 247 YGTITSVALEKDAEGKSRGFGFVDFENHEDAVKAVEALNDTEYKGQTLYVGRAQKKYERL 306
Query: 194 KELGEK---AKL-------FTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GKS 242
+EL ++ +KL N++IKN + +DEKLKE F P+GTITS RVM + GKS
Sbjct: 307 QELKKQYQASKLEKLAKYQGINLFIKNLDDSIDDEKLKEEFAPFGTITSARVMRTENGKS 366
Query: 243 RGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFE 293
+GFGFV + +PE A +A+ N + V GK LYV AQ+K R +L ++ +
Sbjct: 367 KGFGFVCFSTPEEATRAITEKNQQIVAGKPLYVAIAQRKDVRRSQLAQQIQ 417
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/227 (33%), Positives = 118/227 (51%), Gaps = 18/227 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
++++ LD S+ +YD FS GS+ S +V +D S GY +V+F EA +I
Sbjct: 42 TASLYVGELDPSVSEALLYDIFSPIGSVSSIRVCRDAITKTSLGYAYVNFNDHEAGKTAI 101
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
EK+N + + I +R+ + +K N++IKN D +++ L E F +G
Sbjct: 102 EKLNYTAIKGRPC----RIMWSQRDPSMRKKGS--GNIFIKNLHPDIDNKTLYETFSVFG 155
Query: 229 TITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQE 287
I S ++ N++ GKS+GFGFV +E+ E A +A+ A NG ++G+ +YV K +R +
Sbjct: 156 NILSCKIANDETGKSKGFGFVHFENEEAAREAIDAINGMLLNGQEVYVAPHVSKKDRQSK 215
Query: 288 LKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITS 334
L R N+YVKNLD +E F P+GTITS
Sbjct: 216 LDEA----------RANFTNVYVKNLDLEATEEDFENLFKPYGTITS 252
Score = 42.7 bits (99), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 29/135 (21%), Positives = 60/135 (44%), Gaps = 18/135 (13%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQ 261
++Y+ ++ L ++F P G+++S RV + S G+ +V + E + A++
Sbjct: 43 ASLYVGELDPSVSEALLYDIFSPIGSVSSIRVCRDAITKTSLGYAYVNFNDHEAGKTAIE 102
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDER 321
N + G+ + +Q+ + + N+++KNL ID++
Sbjct: 103 KLNYTAIKGRPCRIMWSQRDPS----------------MRKKGSGNIFIKNLHPDIDNKT 146
Query: 322 LRKEFTPFGTITSAK 336
L + F+ FG I S K
Sbjct: 147 LYETFSVFGNILSCK 161
>gi|194386544|dbj|BAG61082.1| unnamed protein product [Homo sapiens]
Length = 604
Score = 323 bits (828), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 168/275 (61%), Positives = 198/275 (72%), Gaps = 36/275 (13%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD +KG+P+RIMWSQRDPSLRKSGV
Sbjct: 53 GYAYVNFQQP--ADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGV------------ 98
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
C DE G SKGYGFVHFET+EAA ++IEK+NGMLLN + VF
Sbjct: 99 ----------------VC----DENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVF 137
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GK 241
VG+F RKERE ELG +AK FTNVYIKNFGED +DE+LK++F +G S +VM ++ GK
Sbjct: 138 VGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGK 197
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
S+GFGFV++E E A+KAV NGKE++GK +YVGRAQKK ER ELKR+FE +K +R+
Sbjct: 198 SKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRIT 257
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLYVKNLDD IDDERLRKEF+PFGTITSAK
Sbjct: 258 RYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAK 292
Score = 164 bits (414), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 108/299 (36%), Positives = 157/299 (52%), Gaps = 35/299 (11%)
Query: 41 LIDGNTVKYDWD--------SGYTCHQLGS---GAILVQLGQPYMLDTERALDTMNFDAL 89
+I G V+ W SG C + GS G + + + ERA++ MN L
Sbjct: 76 VIKGKPVRIMWSQRDPSLRKSGVVCDENGSKGYGFVHFETQE----AAERAIEKMNGMLL 131
Query: 90 KGRPIRI----MWSQRDPSL--RKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVA 143
R + + +R+ L R NV+IKN + +D++ + D F FG LS KV
Sbjct: 132 NDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVM 191
Query: 144 QDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLF 203
DE G SKG+GFV FE E A K+++++NG LN K ++VG+ + ER+ EL K +
Sbjct: 192 TDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQM 251
Query: 204 ----------TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDGKSRGFGFVAYESP 253
N+Y+KN + +DE+L++ F P+GTITS +VM G+S+GFGFV + SP
Sbjct: 252 KQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSP 311
Query: 254 EFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKN 312
E A KAV NG+ V K LYV AQ+K ER L ++ ++R+ Q V V N
Sbjct: 312 EEATKAVTEMNGRIVATKPLYVALAQRKEERQAHLTNQY----MQRMASVQAVPNPVIN 366
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 107/236 (45%), Gaps = 49/236 (20%)
Query: 102 DPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFET 160
+PS + ++++ +L + +Y+ FS G ILS +V +D S GY +V+F+
Sbjct: 2 NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 161 EEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKL 220
A ++++ +N ++ K V + +R+ L +
Sbjct: 62 PADAERALDTMNFDVIKGKPVRIM----WSQRDPSLRKSG-------------------- 97
Query: 221 KEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
V+ ++ S+G+GFV +E+ E AE+A++ NG ++ + ++VGR +
Sbjct: 98 --------------VVCDENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKS 143
Query: 281 KAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ ER EL R + N+Y+KN + +DDERL+ F FG S K
Sbjct: 144 RKEREAELGARAKEF----------TNVYIKNFGEDMDDERLKDLFGKFGPALSVK 189
>gi|225557655|gb|EEH05941.1| polyadenylate-binding protein [Ajellomyces capsulatus G186AR]
gi|240278336|gb|EER41843.1| polyadenylate-binding protein [Ajellomyces capsulatus H143]
gi|325096361|gb|EGC49671.1| polyadenylate-binding protein [Ajellomyces capsulatus H88]
Length = 784
Score = 323 bits (828), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 157/263 (59%), Positives = 199/263 (75%), Gaps = 2/263 (0%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D ERAL+ +N+ +KG+P RIMWSQRDP+LRK+G GNVFIKNLD +IDNKA++DTF+AFG
Sbjct: 108 DGERALEDLNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDTAIDNKALHDTFAAFG 167
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCKVAQDE GNSKGYGFVH+ET EAA +I+ VNGMLLN K VFVG I +K+R+ +
Sbjct: 168 NILSCKVAQDEFGNSKGYGFVHYETAEAATNAIKHVNGMLLNEKKVFVGHHIAKKDRQSK 227
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESP 253
E FTNVY+KN + ++E+ +E+FE YG ITS + + GKSRGFGFV +
Sbjct: 228 FEEMKANFTNVYVKNLDTEVSNEEFRELFEKYGEITSASISRDGETGKSRGFGFVNFVKH 287
Query: 254 EFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNL 313
E A AV+ N KE G+ LYVGRAQKK ER +EL+++ E ++E+ ++YQGVNLYVKNL
Sbjct: 288 ESAAAAVEELNDKEYKGQKLYVGRAQKKHEREEELRKQHEAARVEKASKYQGVNLYVKNL 347
Query: 314 DDSIDDERLRKEFTPFGTITSAK 336
D IDDE+LR F FG ITSA+
Sbjct: 348 TDDIDDEKLRDLFISFGNITSAR 370
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/247 (29%), Positives = 116/247 (46%), Gaps = 64/247 (25%)
Query: 107 KSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQD-EQGNSKGYGFVHFETEEAAN 165
K+ NV++KNLD + N+ + F +G I S +++D E G S+G+GFV+F E+A
Sbjct: 232 KANFTNVYVKNLDTEVSNEEFRELFEKYGEITSASISRDGETGKSRGFGFVNFVKHESAA 291
Query: 166 KSIEKVNGMLLNSKIVFVGKFIPRKEREKELG--------EKAKLF--TNVYIKNFGEDF 215
++E++N + ++VG+ + ERE+EL EKA + N+Y+KN +D
Sbjct: 292 AAVEELNDKEYKGQKLYVGRAQKKHEREEELRKQHEAARVEKASKYQGVNLYVKNLTDDI 351
Query: 216 NDEKLKEMFEPYGTITSYRVMNNDGKSRG------------------------------- 244
+DEKL+++F +G ITS RVM + G
Sbjct: 352 DDEKLRDLFISFGNITSARVMRDTAGDPGSESEKEKESANKENVKDEAKKESGEEDSADK 411
Query: 245 ----------------------FGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKA 282
FGFV + +P+ A KAV N + V+GK LYV AQ+K
Sbjct: 412 SDKVEKSDSKNATEKKLGKSKGFGFVCFSNPDEASKAVTEMNQRMVNGKPLYVALAQRKD 471
Query: 283 ERTQELK 289
R +L+
Sbjct: 472 VRKSQLE 478
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 61/135 (45%), Gaps = 18/135 (13%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQ 261
++Y+ + L E+F G + S RV + +S G+ +V Y + E+A++
Sbjct: 55 ASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALE 114
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDER 321
N + GK + +Q R L++ QG N+++KNLD +ID++
Sbjct: 115 DLNYTLIKGKPCRIMWSQ----RDPALRKTG-----------QG-NVFIKNLDTAIDNKA 158
Query: 322 LRKEFTPFGTITSAK 336
L F FG I S K
Sbjct: 159 LHDTFAAFGNILSCK 173
>gi|398404546|ref|XP_003853739.1| hypothetical protein MYCGRDRAFT_56466 [Zymoseptoria tritici IPO323]
gi|339473622|gb|EGP88715.1| hypothetical protein MYCGRDRAFT_56466 [Zymoseptoria tritici IPO323]
Length = 763
Score = 323 bits (827), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 158/263 (60%), Positives = 197/263 (74%), Gaps = 2/263 (0%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D ERAL+ +N+ +KGRP RIMWSQRDP LRK+G GNVFIKNLD +IDNKA++DTF+AFG
Sbjct: 106 DGERALEELNYTLIKGRPCRIMWSQRDPLLRKTGQGNVFIKNLDAAIDNKALHDTFAAFG 165
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCKVAQDE NSKGYGFVH+ET EAAN++I+ VNGMLLN K VFVG IP+K+R +
Sbjct: 166 NILSCKVAQDENANSKGYGFVHYETAEAANQAIKNVNGMLLNEKKVFVGHHIPKKDRMSK 225
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM--NNDGKSRGFGFVAYESP 253
+ E FTN+Y+KN + D + +E+FE YG ITS + N GK+RGFGFV Y
Sbjct: 226 VEEMKANFTNIYVKNIDSETTDNEFRELFEKYGDITSASLAHDNESGKNRGFGFVNYIRH 285
Query: 254 EFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNL 313
E A KAV+ N + G+ LYVGRAQKK ER +EL++++E + E+ +Y GVNLYVKNL
Sbjct: 286 EDAYKAVEELNDSDFKGQKLYVGRAQKKHEREEELRKQYEAARQEKSAKYTGVNLYVKNL 345
Query: 314 DDSIDDERLRKEFTPFGTITSAK 336
D IDD+ LRK F P+G ITSAK
Sbjct: 346 ADEIDDDELRKVFEPYGAITSAK 368
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/246 (30%), Positives = 119/246 (48%), Gaps = 63/246 (25%)
Query: 107 KSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQD-EQGNSKGYGFVHFETEEAAN 165
K+ N+++KN+D + + F +G I S +A D E G ++G+GFV++ E A
Sbjct: 230 KANFTNIYVKNIDSETTDNEFRELFEKYGDITSASLAHDNESGKNRGFGFVNYIRHEDAY 289
Query: 166 KSIEKVNGMLLNSKIVFVGKFIPRKEREKEL--------GEKAKLFT--NVYIKNFGEDF 215
K++E++N + ++VG+ + ERE+EL EK+ +T N+Y+KN ++
Sbjct: 290 KAVEELNDSDFKGQKLYVGRAQKKHEREEELRKQYEAARQEKSAKYTGVNLYVKNLADEI 349
Query: 216 NDEKLKEMFEPYGTITSYRVMNND------------------------------------ 239
+D++L+++FEPYG ITS +VM +
Sbjct: 350 DDDELRKVFEPYGAITSAKVMRDTLPADGSETPAKKEGDAEEKEAEPEKDGEKKDDVDDL 409
Query: 240 ----------------GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAE 283
GKS+GFGFV + +P+ A KAV N K V GK LYV AQ+K
Sbjct: 410 SKKLDTVTIQGEKKLLGKSKGFGFVCFSNPDEATKAVTELNQKMVHGKPLYVALAQRKEV 469
Query: 284 RTQELK 289
R +L+
Sbjct: 470 RKSQLE 475
Score = 41.6 bits (96), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 58/134 (43%), Gaps = 20/134 (14%)
Query: 206 VYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQAW 263
+Y+ + L E+F G + S RV + +S G+ +V Y E+A++
Sbjct: 55 LYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNVAGDGERALEEL 114
Query: 264 NGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGV-NLYVKNLDDSIDDERL 322
N + G+ + +Q+ + L R G N+++KNLD +ID++ L
Sbjct: 115 NYTLIKGRPCRIMWSQR-----------------DPLLRKTGQGNVFIKNLDAAIDNKAL 157
Query: 323 RKEFTPFGTITSAK 336
F FG I S K
Sbjct: 158 HDTFAAFGNILSCK 171
>gi|359322009|ref|XP_850457.3| PREDICTED: uncharacterized protein LOC483825 [Canis lupus
familiaris]
Length = 1009
Score = 323 bits (827), Expect = 1e-85, Method: Composition-based stats.
Identities = 150/264 (56%), Positives = 201/264 (76%), Gaps = 2/264 (0%)
Query: 74 MLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSA 133
+ D +RALDTMNFD L+GRP+R+MWSQRD LRKSGVGNVFIKNLD+S+D+KA+++ FSA
Sbjct: 199 LADAQRALDTMNFDVLRGRPLRLMWSQRDAHLRKSGVGNVFIKNLDRSVDDKALFERFSA 258
Query: 134 FGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKERE 193
FG ILS KV DE+G S+GY FVHF+ + AA+++IE +NG L +FVG+F R+ RE
Sbjct: 259 FGKILSSKVVSDERG-SRGYAFVHFQEQSAADRAIEHMNGAQLRGCRLFVGRFQSRQARE 317
Query: 194 KELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGKSRGFGFVAYES 252
EL +A FTN+YIKNFG +D +L+ +F YG S +VM + G+SRGFGFV++ES
Sbjct: 318 AELRSRAGEFTNLYIKNFGGRMDDARLRAVFSEYGKTLSVKVMTDASGRSRGFGFVSFES 377
Query: 253 PEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKN 312
E A +AV+A NG++VDG+ L+VGRAQ+KAER EL+R FE + + L R QG LYVKN
Sbjct: 378 HEAARRAVEALNGRQVDGQPLFVGRAQRKAERQAELRRAFEQRQQDGLRRAQGAKLYVKN 437
Query: 313 LDDSIDDERLRKEFTPFGTITSAK 336
LDD++D++RLR+EF+ FG ++ K
Sbjct: 438 LDDAVDEDRLRREFSGFGAVSRVK 461
Score = 122 bits (306), Expect = 2e-25, Method: Composition-based stats.
Identities = 66/220 (30%), Positives = 119/220 (54%), Gaps = 16/220 (7%)
Query: 78 ERALDTMNFDALKGRPIRIMWSQ----RDPSLRKSG--VGNVFIKNLDKSIDNKAMYDTF 131
+RA++ MN L+G + + Q R+ LR N++IKN +D+ + F
Sbjct: 289 DRAIEHMNGAQLRGCRLFVGRFQSRQAREAELRSRAGEFTNLYIKNFGGRMDDARLRAVF 348
Query: 132 SAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKE 191
S +G LS KV D G S+G+GFV FE+ EAA +++E +NG ++ + +FVG+ + E
Sbjct: 349 SEYGKTLSVKVMTDASGRSRGFGFVSFESHEAARRAVEALNGRQVDGQPLFVGRAQRKAE 408
Query: 192 REKEL----------GEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDGK 241
R+ EL G + +Y+KN + ++++L+ F +G ++ ++M +G+
Sbjct: 409 RQAELRRAFEQRQQDGLRRAQGAKLYVKNLDDAVDEDRLRREFSGFGAVSRVKIMREEGR 468
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKK 281
S+GFG + + S + A +A+ NG+ + K L + AQ +
Sbjct: 469 SKGFGLICFSSADEAARALAEMNGRVLGSKPLSIALAQSR 508
Score = 109 bits (272), Expect = 2e-21, Method: Composition-based stats.
Identities = 66/227 (29%), Positives = 118/227 (51%), Gaps = 17/227 (7%)
Query: 111 GNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQD-EQGNSKGYGFVHFETEEAANKSIE 169
++++ +LD + A++ FSA G +LS ++ +D S GY +V+F A ++++
Sbjct: 148 ASLYVGDLDAEVTEDALFRKFSAAGPVLSIRICRDLLTRRSLGYAYVNFLRLADAQRALD 207
Query: 170 KVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGT 229
+N +L + + + +R+ L + NV+IKN +D+ L E F +G
Sbjct: 208 TMNFDVLRGRPL----RLMWSQRDAHLRKSG--VGNVFIKNLDRSVDDKALFERFSAFGK 261
Query: 230 ITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELK 289
I S +V++++ SRG+ FV ++ A++A++ NG ++ G L+VGR Q + R EL+
Sbjct: 262 ILSSKVVSDERGSRGYAFVHFQEQSAADRAIEHMNGAQLRGCRLFVGRFQSRQAREAELR 321
Query: 290 RRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
R + NLY+KN +DD RLR F+ +G S K
Sbjct: 322 SRAG----------EFTNLYIKNFGGRMDDARLRAVFSEYGKTLSVK 358
>gi|168036104|ref|XP_001770548.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678256|gb|EDQ64717.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 645
Score = 322 bits (826), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 160/262 (61%), Positives = 205/262 (78%), Gaps = 3/262 (1%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D RAL+ +NF+A+ G+PIRIM+S RDPS+RKSG N+FIKNLDKSIDNKA++DTF+AFG
Sbjct: 77 DATRALELLNFNAVNGKPIRIMFSHRDPSIRKSGTANIFIKNLDKSIDNKALHDTFAAFG 136
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCKVA D G SKGYGFV FE EE+A +IEKVNGMLLN K VFVG F+ R+ER++
Sbjct: 137 TILSCKVATDPSGQSKGYGFVQFEQEESAQTAIEKVNGMLLNDKQVFVGPFVRRQERDQS 196
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPE 254
G +K F NVY+KN + D++LK++FE YG I+S VM +N+GKS+ FGFV +E +
Sbjct: 197 -GVVSK-FNNVYVKNLADSTTDDELKKVFEAYGPISSAVVMRDNEGKSKCFGFVNFEHAD 254
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A KAV+A NGK+ D K YVGRAQKK+ER EL+ +FE + ER+ +YQGVNLY+KNLD
Sbjct: 255 DAAKAVEALNGKKFDEKEWYVGRAQKKSEREAELRAKFEQERKERIEKYQGVNLYLKNLD 314
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
D+IDDE+LR+ F+ +GTI S K
Sbjct: 315 DTIDDEKLREIFSEYGTIVSCK 336
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 85/206 (41%), Positives = 118/206 (57%), Gaps = 15/206 (7%)
Query: 100 QRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFE 159
+RD S S NV++KNL S + + F A+G I S V +D +G SK +GFV+FE
Sbjct: 192 ERDQSGVVSKFNNVYVKNLADSTTDDELKKVFEAYGPISSAVVMRDNEGKSKCFGFVNFE 251
Query: 160 TEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKL------------FTNVY 207
+ A K++E +NG + K +VG+ + ERE EL +AK N+Y
Sbjct: 252 HADDAAKAVEALNGKKFDEKEWYVGRAQKKSEREAEL--RAKFEQERKERIEKYQGVNLY 309
Query: 208 IKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGK 266
+KN + +DEKL+E+F YGTI S +VM + G+SRG GFVA+ SP+ A +AV NGK
Sbjct: 310 LKNLDDTIDDEKLREIFSEYGTIVSCKVMRDPQGQSRGSGFVAFSSPDEATRAVTEMNGK 369
Query: 267 EVDGKILYVGRAQKKAERTQELKRRF 292
V K LYV AQ+K ER L+ F
Sbjct: 370 MVGSKPLYVALAQRKEERRNRLQAAF 395
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 123/226 (54%), Gaps = 20/226 (8%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSIEK 170
++++ +L+ ++ +Y+ FS G ++S +V +D S GY +V++ + A +++E
Sbjct: 25 SLYVGDLESTVSEAQLYEIFSQVGQVVSIRVCRDLITRRSLGYAYVNYNNAQDATRALEL 84
Query: 171 VNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTI 230
+N +N K + + F R ++ G N++IKN + +++ L + F +GTI
Sbjct: 85 LNFNAVNGKPIRI-MFSHRDPSIRKSGT-----ANIFIKNLDKSIDNKALHDTFAAFGTI 138
Query: 231 TSYRVMNN-DGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELK 289
S +V + G+S+G+GFV +E E A+ A++ NG ++ K ++VG ++ ER Q
Sbjct: 139 LSCKVATDPSGQSKGYGFVQFEQEESAQTAIEKVNGMLLNDKQVFVGPFVRRQERDQS-- 196
Query: 290 RRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSA 335
+ + N N+YVKNL DS D+ L+K F +G I+SA
Sbjct: 197 -----GVVSKFN-----NVYVKNLADSTTDDELKKVFEAYGPISSA 232
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 65/135 (48%), Gaps = 18/135 (13%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQ 261
T++Y+ + ++ +L E+F G + S RV + +S G+ +V Y + + A +A++
Sbjct: 24 TSLYVGDLESTVSEAQLYEIFSQVGQVVSIRVCRDLITRRSLGYAYVNYNNAQDATRALE 83
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDER 321
N V+GK + + + + + + N+++KNLD SID++
Sbjct: 84 LLNFNAVNGKPIRIMFSHRDPS----------------IRKSGTANIFIKNLDKSIDNKA 127
Query: 322 LRKEFTPFGTITSAK 336
L F FGTI S K
Sbjct: 128 LHDTFAAFGTILSCK 142
>gi|426200105|gb|EKV50029.1| hypothetical protein AGABI2DRAFT_190442 [Agaricus bisporus var.
bisporus H97]
Length = 673
Score = 322 bits (826), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 154/262 (58%), Positives = 197/262 (75%), Gaps = 1/262 (0%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D ERAL+ +N+ +K R RIMWSQRDP+LRK+G GNVFIKNLD++IDNKA++DTF AFG
Sbjct: 95 DGERALEQLNYSLIKNRACRIMWSQRDPALRKTGQGNVFIKNLDEAIDNKALHDTFVAFG 154
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
++LSCKVA DE G SKGYGFVH+ET EAA+ +I+ VNGMLLN K V+VG I RKER+ +
Sbjct: 155 NVLSCKVATDEHGRSKGYGFVHYETAEAADNAIKSVNGMLLNDKKVYVGHHISRKERQSK 214
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGKSRGFGFVAYESPE 254
L E FTN+YIKN + E+ E+F YG +TS V + +GKS+GFGFV YE E
Sbjct: 215 LDEMKAQFTNLYIKNLDTEVTQEEFTELFTRYGNVTSSLVATDEEGKSKGFGFVNYERHE 274
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A++AV + ++ GK L+V RAQKKAER EL+R +E K+E+L++YQGVNLY+KNL+
Sbjct: 275 EAQRAVDELHDTDLKGKKLFVARAQKKAEREDELRRSYEQAKLEKLSKYQGVNLYIKNLE 334
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
D DD++LR EF PFG ITS K
Sbjct: 335 DDFDDDKLRAEFEPFGAITSCK 356
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 80/197 (40%), Positives = 123/197 (62%), Gaps = 11/197 (5%)
Query: 107 KSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANK 166
K+ N++IKNLD + + + F+ +G++ S VA DE+G SKG+GFV++E E A +
Sbjct: 219 KAQFTNLYIKNLDTEVTQEEFTELFTRYGNVTSSLVATDEEGKSKGFGFVNYERHEEAQR 278
Query: 167 SIEKVNGMLLNSKIVFVGKFIPRKEREKELG---EKAKL-------FTNVYIKNFGEDFN 216
++++++ L K +FV + + ERE EL E+AKL N+YIKN +DF+
Sbjct: 279 AVDELHDTDLKGKKLFVARAQKKAEREDELRRSYEQAKLEKLSKYQGVNLYIKNLEDDFD 338
Query: 217 DEKLKEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYV 275
D+KL+ FEP+G ITS +VM ++ G S+GFGFV + SP+ A KAV N K + K LYV
Sbjct: 339 DDKLRAEFEPFGAITSCKVMRDEKGTSKGFGFVCFSSPDEATKAVAEMNNKMIGTKPLYV 398
Query: 276 GRAQKKAERTQELKRRF 292
AQ++ R Q+L+ +
Sbjct: 399 SLAQRREVRRQQLESQI 415
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 79/138 (57%), Gaps = 18/138 (13%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQ----RDPSLRKS-------------GVGNVFIKNL 118
+ +RA+D ++ LKG+ + + +Q R+ LR+S GV N++IKNL
Sbjct: 275 EAQRAVDELHDTDLKGKKLFVARAQKKAEREDELRRSYEQAKLEKLSKYQGV-NLYIKNL 333
Query: 119 DKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNS 178
+ D+ + F FG+I SCKV +DE+G SKG+GFV F + + A K++ ++N ++ +
Sbjct: 334 EDDFDDDKLRAEFEPFGAITSCKVMRDEKGTSKGFGFVCFSSPDEATKAVAEMNNKMIGT 393
Query: 179 KIVFVGKFIPRKEREKEL 196
K ++V R+ R ++L
Sbjct: 394 KPLYVSLAQRREVRRQQL 411
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 61/135 (45%), Gaps = 18/135 (13%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQ 261
++Y+ + L E+F G + S RV + +S G+ +V Y + E+A++
Sbjct: 42 ASLYVGELDPTVTEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNAADGERALE 101
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDER 321
N + + + +Q R L++ QG N+++KNLD++ID++
Sbjct: 102 QLNYSLIKNRACRIMWSQ----RDPALRKTG-----------QG-NVFIKNLDEAIDNKA 145
Query: 322 LRKEFTPFGTITSAK 336
L F FG + S K
Sbjct: 146 LHDTFVAFGNVLSCK 160
>gi|395333502|gb|EJF65879.1| polyadenylate binding protein [Dichomitus squalens LYAD-421 SS1]
Length = 664
Score = 322 bits (825), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 152/266 (57%), Positives = 203/266 (76%), Gaps = 5/266 (1%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D ERAL+ +N+ +KGR RIMWSQRDP+LRK+G GN+FIKNLD+ IDNKA++DTF+AFG
Sbjct: 97 DGERALEQLNYSLIKGRACRIMWSQRDPALRKTGQGNIFIKNLDEQIDNKALHDTFAAFG 156
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRK----E 191
++LSCKVA DE G SKGYGFVH+ET EAA +I+ VNGMLLN K V+VG I RK E
Sbjct: 157 NVLSCKVATDEHGRSKGYGFVHYETAEAAETAIKAVNGMLLNDKKVYVGHHISRKASSRE 216
Query: 192 REKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GKSRGFGFVAY 250
R+ +L E FTN+Y+KN + + ++FE +G +TS + ++ G+SRGFGFV +
Sbjct: 217 RQSKLEEMKAQFTNIYVKNLDPEVTQDDFVKLFEQFGNVTSAVIQTDEQGQSRGFGFVNF 276
Query: 251 ESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYV 310
E+ E A+KAV+ + E G+ L+V RAQKKAER +EL++ +E K+E++++YQGVNLY+
Sbjct: 277 ETHEEAQKAVETLHDSEYHGRKLFVSRAQKKAEREEELRKSYEQAKVEKMSKYQGVNLYI 336
Query: 311 KNLDDSIDDERLRKEFTPFGTITSAK 336
KNL+D IDDERLR+EF PFG+ITSAK
Sbjct: 337 KNLEDDIDDERLRQEFEPFGSITSAK 362
Score = 144 bits (364), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 78/197 (39%), Positives = 121/197 (61%), Gaps = 11/197 (5%)
Query: 107 KSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANK 166
K+ N+++KNLD + F FG++ S + DEQG S+G+GFV+FET E A K
Sbjct: 225 KAQFTNIYVKNLDPEVTQDDFVKLFEQFGNVTSAVIQTDEQGQSRGFGFVNFETHEEAQK 284
Query: 167 SIEKVNGMLLNSKIVFVGKFIPRKEREKELG---EKAKL-------FTNVYIKNFGEDFN 216
++E ++ + + +FV + + ERE+EL E+AK+ N+YIKN +D +
Sbjct: 285 AVETLHDSEYHGRKLFVSRAQKKAEREEELRKSYEQAKVEKMSKYQGVNLYIKNLEDDID 344
Query: 217 DEKLKEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYV 275
DE+L++ FEP+G+ITS +VM ++ G S+GFGFV + SP+ A KAV N K + K LYV
Sbjct: 345 DERLRQEFEPFGSITSAKVMRDEKGTSKGFGFVCFSSPDEATKAVAEMNNKMIGSKPLYV 404
Query: 276 GRAQKKAERTQELKRRF 292
AQ++ R Q+L+ +
Sbjct: 405 SLAQRREVRRQQLESQI 421
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 79/138 (57%), Gaps = 18/138 (13%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQ----RDPSLRKS-------------GVGNVFIKNL 118
+ ++A++T++ GR + + +Q R+ LRKS GV N++IKNL
Sbjct: 281 EAQKAVETLHDSEYHGRKLFVSRAQKKAEREEELRKSYEQAKVEKMSKYQGV-NLYIKNL 339
Query: 119 DKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNS 178
+ ID++ + F FGSI S KV +DE+G SKG+GFV F + + A K++ ++N ++ S
Sbjct: 340 EDDIDDERLRQEFEPFGSITSAKVMRDEKGTSKGFGFVCFSSPDEATKAVAEMNNKMIGS 399
Query: 179 KIVFVGKFIPRKEREKEL 196
K ++V R+ R ++L
Sbjct: 400 KPLYVSLAQRREVRRQQL 417
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 61/135 (45%), Gaps = 18/135 (13%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQ 261
++Y+ + L E+F G + S RV + +S G+ +V Y + E+A++
Sbjct: 44 ASLYVGELDPTVTEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNAADGERALE 103
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDER 321
N + G+ + +Q R L++ QG N+++KNLD+ ID++
Sbjct: 104 QLNYSLIKGRACRIMWSQ----RDPALRKTG-----------QG-NIFIKNLDEQIDNKA 147
Query: 322 LRKEFTPFGTITSAK 336
L F FG + S K
Sbjct: 148 LHDTFAAFGNVLSCK 162
>gi|409082274|gb|EKM82632.1| hypothetical protein AGABI1DRAFT_111221 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 671
Score = 322 bits (824), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 153/262 (58%), Positives = 197/262 (75%), Gaps = 1/262 (0%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D ERAL+ +N+ +K R RIMWSQRDP+LRK+G GNVFIKNLD++IDNKA++DTF AFG
Sbjct: 95 DGERALEQLNYSLIKNRACRIMWSQRDPALRKTGQGNVFIKNLDEAIDNKALHDTFVAFG 154
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
++LSCKVA DE G SKGYGFVH+ET EAA+ +I+ VNGMLLN K V+VG I RKER+ +
Sbjct: 155 NVLSCKVATDEHGRSKGYGFVHYETAEAADNAIKSVNGMLLNDKKVYVGHHISRKERQSK 214
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGKSRGFGFVAYESPE 254
L E FTN+YIKN + E+ E+F YG +TS V + +GKS+GFGFV YE E
Sbjct: 215 LDEMKAQFTNLYIKNLDTEVTQEEFTELFTRYGNVTSSLVATDEEGKSKGFGFVNYERHE 274
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A++AV + ++ GK L+V RAQKKAER EL+R +E K+E+L++YQG+NLY+KNL+
Sbjct: 275 EAQRAVDELHDTDLKGKKLFVARAQKKAEREDELRRSYEQAKLEKLSKYQGINLYIKNLE 334
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
D DD++LR EF PFG ITS K
Sbjct: 335 DDFDDDKLRAEFEPFGAITSCK 356
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 80/197 (40%), Positives = 123/197 (62%), Gaps = 11/197 (5%)
Query: 107 KSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANK 166
K+ N++IKNLD + + + F+ +G++ S VA DE+G SKG+GFV++E E A +
Sbjct: 219 KAQFTNLYIKNLDTEVTQEEFTELFTRYGNVTSSLVATDEEGKSKGFGFVNYERHEEAQR 278
Query: 167 SIEKVNGMLLNSKIVFVGKFIPRKEREKELG---EKAKL-------FTNVYIKNFGEDFN 216
++++++ L K +FV + + ERE EL E+AKL N+YIKN +DF+
Sbjct: 279 AVDELHDTDLKGKKLFVARAQKKAEREDELRRSYEQAKLEKLSKYQGINLYIKNLEDDFD 338
Query: 217 DEKLKEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYV 275
D+KL+ FEP+G ITS +VM ++ G S+GFGFV + SP+ A KAV N K + K LYV
Sbjct: 339 DDKLRAEFEPFGAITSCKVMRDEKGTSKGFGFVCFSSPDEATKAVAEMNNKMIGTKPLYV 398
Query: 276 GRAQKKAERTQELKRRF 292
AQ++ R Q+L+ +
Sbjct: 399 SLAQRREVRRQQLESQI 415
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 79/138 (57%), Gaps = 18/138 (13%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQ----RDPSLRKS-------------GVGNVFIKNL 118
+ +RA+D ++ LKG+ + + +Q R+ LR+S G+ N++IKNL
Sbjct: 275 EAQRAVDELHDTDLKGKKLFVARAQKKAEREDELRRSYEQAKLEKLSKYQGI-NLYIKNL 333
Query: 119 DKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNS 178
+ D+ + F FG+I SCKV +DE+G SKG+GFV F + + A K++ ++N ++ +
Sbjct: 334 EDDFDDDKLRAEFEPFGAITSCKVMRDEKGTSKGFGFVCFSSPDEATKAVAEMNNKMIGT 393
Query: 179 KIVFVGKFIPRKEREKEL 196
K ++V R+ R ++L
Sbjct: 394 KPLYVSLAQRREVRRQQL 411
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 61/135 (45%), Gaps = 18/135 (13%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQ 261
++Y+ + L E+F G + S RV + +S G+ +V Y + E+A++
Sbjct: 42 ASLYVGELDPTVTEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNAADGERALE 101
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDER 321
N + + + +Q R L++ QG N+++KNLD++ID++
Sbjct: 102 QLNYSLIKNRACRIMWSQ----RDPALRKTG-----------QG-NVFIKNLDEAIDNKA 145
Query: 322 LRKEFTPFGTITSAK 336
L F FG + S K
Sbjct: 146 LHDTFVAFGNVLSCK 160
>gi|273068254|gb|ACZ97550.1| apoptosis-promoting RNA-binding protein [Ornithodoros moubata]
Length = 204
Score = 322 bits (824), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 156/204 (76%), Positives = 180/204 (88%), Gaps = 1/204 (0%)
Query: 80 ALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILS 139
ALDTMNFD +K +PIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG+ILS
Sbjct: 1 ALDTMNFDPIKNKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGNILS 60
Query: 140 CKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEK 199
C+VA DE+ NSKGYGFVHFETEEAAN +I KVNGMLLN K VFVG+FIPRKERE+ LG+K
Sbjct: 61 CRVATDEEANSKGYGFVHFETEEAANNAISKVNGMLLNGKKVFVGRFIPRKERERLLGDK 120
Query: 200 AKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPEFAEK 258
A+ FTNVYIKNFG++ +DEKL +F+ YG +TS +VM + +GK+RGFGFV++E PE AEK
Sbjct: 121 ARRFTNVYIKNFGDELDDEKLVVIFDKYGKVTSAKVMVDENGKNRGFGFVSFEDPECAEK 180
Query: 259 AVQAWNGKEVDGKILYVGRAQKKA 282
AV+ NGK+V GK LYVGRAQKKA
Sbjct: 181 AVEELNGKDVGGKPLYVGRAQKKA 204
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 75/136 (55%), Gaps = 17/136 (12%)
Query: 205 NVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAW 263
NV+IKN + +++ + + F +G I S RV ++ S+G+GFV +E+ E A A+
Sbjct: 33 NVFIKNLDKSIDNKAMYDTFSAFGNILSCRVATDEEANSKGYGFVHFETEEAANNAISKV 92
Query: 264 NGKEVDGKILYVGRAQKKAERTQEL---KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDE 320
NG ++GK ++VGR + ER + L RRF N+Y+KN D +DDE
Sbjct: 93 NGMLLNGKKVFVGRFIPRKERERLLGDKARRF-------------TNVYIKNFGDELDDE 139
Query: 321 RLRKEFTPFGTITSAK 336
+L F +G +TSAK
Sbjct: 140 KLVVIFDKYGKVTSAK 155
>gi|406867457|gb|EKD20495.1| 4 family polyadenylate binding protein [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 785
Score = 322 bits (824), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 158/264 (59%), Positives = 208/264 (78%), Gaps = 2/264 (0%)
Query: 75 LDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAF 134
+D E+AL+ +N+ +KGRP RIMWSQRDP+LRK+G GNVFIKNLD +IDNKA++DTF+AF
Sbjct: 114 IDGEKALEELNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDTAIDNKALHDTFAAF 173
Query: 135 GSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREK 194
G+ILSCKVAQDE G SKGYGFVH+ET+EAA+++I+ VNGMLLN K VFVG IP+K+R+
Sbjct: 174 GNILSCKVAQDETGASKGYGFVHYETDEAASQAIKHVNGMLLNEKKVFVGHHIPKKDRQS 233
Query: 195 ELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM--NNDGKSRGFGFVAYES 252
+ E FTN+Y+KN + DE+ +E+FE +G +TS + + KSRGFGFV + +
Sbjct: 234 KFEEMKANFTNIYVKNIPVEATDEEFRELFEKFGDVTSASLARDTDSNKSRGFGFVNFIN 293
Query: 253 PEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKN 312
E A KAV NGK+ G+ LYVGRAQKK ER +EL++ +E +IE+ ++YQGVNLYVKN
Sbjct: 294 HEHAAKAVDELNGKDFKGQDLYVGRAQKKHEREEELRKSYEAARIEKASKYQGVNLYVKN 353
Query: 313 LDDSIDDERLRKEFTPFGTITSAK 336
LDD +DD++LR+ FTPFG+ITSAK
Sbjct: 354 LDDDVDDDKLRELFTPFGSITSAK 377
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/238 (31%), Positives = 119/238 (50%), Gaps = 55/238 (23%)
Query: 107 KSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGN-SKGYGFVHFETEEAAN 165
K+ N+++KN+ ++ + F FG + S +A+D N S+G+GFV+F E A
Sbjct: 239 KANFTNIYVKNIPVEATDEEFRELFEKFGDVTSASLARDTDSNKSRGFGFVNFINHEHAA 298
Query: 166 KSIEKVNGMLLNSKIVFVGKFIPRKEREKELG--------EKAKLF--TNVYIKNFGEDF 215
K+++++NG + ++VG+ + ERE+EL EKA + N+Y+KN +D
Sbjct: 299 KAVDELNGKDFKGQDLYVGRAQKKHEREEELRKSYEAARIEKASKYQGVNLYVKNLDDDV 358
Query: 216 NDEKLKEMFEPYGTITSYRVMNND------------------------------------ 239
+D+KL+E+F P+G+ITS +VM +
Sbjct: 359 DDDKLRELFTPFGSITSAKVMRDTPAETAEAEEKEKKDSEKNKENIKEGETAEAENTEDK 418
Query: 240 --------GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELK 289
GKS+GFGFV + +PE A KAV N + V+ K LYV AQ+K R +L+
Sbjct: 419 PKSEKRTVGKSKGFGFVCFNNPEEASKAVTDMNQRMVNNKPLYVALAQRKDVRKNQLE 476
Score = 44.3 bits (103), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 62/135 (45%), Gaps = 18/135 (13%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQ 261
++Y+ + L E+F G++ S RV + +S G+ +V Y + EKA++
Sbjct: 62 ASLYVGELDSSVTEAMLFELFSQIGSVASIRVCRDAVTRRSLGYAYVNYNTTIDGEKALE 121
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDER 321
N + G+ + +Q R L++ QG N+++KNLD +ID++
Sbjct: 122 ELNYTLIKGRPCRIMWSQ----RDPALRK-----------TGQG-NVFIKNLDTAIDNKA 165
Query: 322 LRKEFTPFGTITSAK 336
L F FG I S K
Sbjct: 166 LHDTFAAFGNILSCK 180
>gi|449302325|gb|EMC98334.1| hypothetical protein BAUCODRAFT_86883 [Baudoinia compniacensis UAMH
10762]
Length = 802
Score = 322 bits (824), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 158/263 (60%), Positives = 198/263 (75%), Gaps = 2/263 (0%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D ERAL+ +N+ +KGRP RIMWSQRDP+LRK+G GNVFIKNLD +IDNKA++DTF+AFG
Sbjct: 114 DGERALEELNYTLIKGRPCRIMWSQRDPALRKTGHGNVFIKNLDGAIDNKALHDTFAAFG 173
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCKVA DE GNSKGYGFVH+ET EAA+++I+ VNGMLLN K VFVG IP+K+R +
Sbjct: 174 NILSCKVAVDELGNSKGYGFVHYETAEAASQAIKSVNGMLLNEKKVFVGHHIPKKDRMSK 233
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM--NNDGKSRGFGFVAYESP 253
E FTN+Y+KN + D++ +E+FE YG ITS + N GKSRGFGFV Y +
Sbjct: 234 FEEMKANFTNIYVKNIETEVTDDEFRELFEKYGEITSASLAHDNETGKSRGFGFVNYINH 293
Query: 254 EFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNL 313
E A KAV N + G+ LYVGRAQKK ER +EL++++E + E+ +YQGVNLYVKNL
Sbjct: 294 EDAYKAVDELNDSDFHGQKLYVGRAQKKHEREEELRKQYEAARQEKSAKYQGVNLYVKNL 353
Query: 314 DDSIDDERLRKEFTPFGTITSAK 336
D +DDE LRK F +G ITSAK
Sbjct: 354 ADEVDDEELRKIFEAYGAITSAK 376
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 85/141 (60%), Gaps = 11/141 (7%)
Query: 107 KSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQD-EQGNSKGYGFVHFETEEAAN 165
K+ N+++KN++ + + + F +G I S +A D E G S+G+GFV++ E A
Sbjct: 238 KANFTNIYVKNIETEVTDDEFRELFEKYGEITSASLAHDNETGKSRGFGFVNYINHEDAY 297
Query: 166 KSIEKVNGMLLNSKIVFVGKFIPRKEREKEL--------GEKAKLF--TNVYIKNFGEDF 215
K+++++N + + ++VG+ + ERE+EL EK+ + N+Y+KN ++
Sbjct: 298 KAVDELNDSDFHGQKLYVGRAQKKHEREEELRKQYEAARQEKSAKYQGVNLYVKNLADEV 357
Query: 216 NDEKLKEMFEPYGTITSYRVM 236
+DE+L+++FE YG ITS +VM
Sbjct: 358 DDEELRKIFEAYGAITSAKVM 378
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 37/63 (58%)
Query: 240 GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIER 299
GKS+GFGFV + +P+ A KAV N K + GK LYV AQ+K R +L+ + R
Sbjct: 439 GKSKGFGFVCFSNPDEATKAVTELNQKMIHGKPLYVALAQRKEVRKTQLEASIQARNQVR 498
Query: 300 LNR 302
+ +
Sbjct: 499 MQQ 501
Score = 45.1 bits (105), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 58/135 (42%), Gaps = 18/135 (13%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQ 261
++Y+ + L E+F G + S RV + +S G+ +V Y S E+A++
Sbjct: 61 ASLYVGELDPSVTEAMLFELFSSVGQVASIRVCRDAVTRRSLGYAYVNYNSANDGERALE 120
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDER 321
N + G+ + +Q+ L + N+++KNLD +ID++
Sbjct: 121 ELNYTLIKGRPCRIMWSQRDP----------------ALRKTGHGNVFIKNLDGAIDNKA 164
Query: 322 LRKEFTPFGTITSAK 336
L F FG I S K
Sbjct: 165 LHDTFAAFGNILSCK 179
>gi|339246497|ref|XP_003374882.1| putative RNA recognition motif protein [Trichinella spiralis]
gi|316971853|gb|EFV55580.1| putative RNA recognition motif protein [Trichinella spiralis]
Length = 758
Score = 321 bits (823), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 161/262 (61%), Positives = 192/262 (73%), Gaps = 28/262 (10%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D ERALDTMNFD + GRPIRIMWSQRDPSLR+SGVGNVFIKNLDK ID+KA+YDTFS FG
Sbjct: 65 DAERALDTMNFDPVFGRPIRIMWSQRDPSLRRSGVGNVFIKNLDKDIDHKAIYDTFSNFG 124
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCKVA DE G SKGYG +VGKFIPR +R +E
Sbjct: 125 NILSCKVATDENGVSKGYG---------------------------YVGKFIPRAQRMRE 157
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEF 255
+GE + FTNVY+KNF E+F D+ L ++F +G I S VM D KS+GFGFV++E+PE
Sbjct: 158 IGETTRKFTNVYVKNFDENFTDQCLVDLFSKFGKIQSCVVMKEDDKSKGFGFVSFENPED 217
Query: 256 AEKAVQAWNGKEV-DGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
AE AV+ N ++ GK LYVGRAQKKAER ELKRR+EMLK+ER+ +Y+GVNLY+KNLD
Sbjct: 218 AEAAVKEMNEYQLPSGKKLYVGRAQKKAERQAELKRRYEMLKLERIQQYEGVNLYLKNLD 277
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
DS+DD +LRK F FG ITSAK
Sbjct: 278 DSVDDAQLRKAFEKFGVITSAK 299
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 76/211 (36%), Positives = 125/211 (59%), Gaps = 19/211 (9%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV++KN D++ ++ + D FS FG I SC V E SKG+GFV FE E A +++++
Sbjct: 167 NVYVKNFDENFTDQCLVDLFSKFGKIQSC-VVMKEDDKSKGFGFVSFENPEDAEAAVKEM 225
Query: 172 NGMLLNS-KIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKL 220
N L S K ++VG+ + ER+ EL + ++ N+Y+KN + +D +L
Sbjct: 226 NEYQLPSGKKLYVGRAQKKAERQAELKRRYEMLKLERIQQYEGVNLYLKNLDDSVDDAQL 285
Query: 221 KEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQ 279
++ FE +G ITS +VM ++ G+S+GFGFV + SP+ A +AV N +++ K LYV AQ
Sbjct: 286 RKAFEKFGVITSAKVMTDEKGQSKGFGFVCFSSPDEATRAVSEMNNQKLGNKPLYVALAQ 345
Query: 280 KKAERTQELKRRFEMLKIERLN--RYQGVNL 308
+K +R +L + ++R+N R+Q V +
Sbjct: 346 RKEDRKAQLASQL----VQRVNALRFQTVGM 372
>gi|56758360|gb|AAW27320.1| SJCHGC06322 protein [Schistosoma japonicum]
Length = 721
Score = 321 bits (823), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 155/262 (59%), Positives = 200/262 (76%), Gaps = 4/262 (1%)
Query: 77 TERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGS 136
E+AL+ +N++ L GRPIRIMWSQRDPSLRKSG GN+FIKNLDKSI+ K +YDTFS FG
Sbjct: 67 AEQALEVLNYEPLMGRPIRIMWSQRDPSLRKSGKGNIFIKNLDKSIEQKELYDTFSFFGR 126
Query: 137 ILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKEL 196
ILSCK+ DE G SKGYGFVHFE EE A ++IEK+N M++ ++V+VGKFIP+ ER K
Sbjct: 127 ILSCKIVMDENGQSKGYGFVHFEKEECAERAIEKINNMIIRDRVVYVGKFIPKTER-KSQ 185
Query: 197 GEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPEF 255
K K F N+Y+KNF + ++EKLKEMF +G I S VM +N+GKS+GFGFV Y P+
Sbjct: 186 ARKVK-FNNLYVKNFPPETDNEKLKEMFSEFGEIKSACVMKDNEGKSKGFGFVCYLDPDH 244
Query: 256 AEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQ-GVNLYVKNLD 314
AE AV+ +GKE++G++LY RAQ+K ER +ELK++ E + ER + Y VNLYVKNLD
Sbjct: 245 AENAVRTMHGKEIEGRVLYCARAQRKEERQEELKQKIEKQRAERQSNYMLNVNLYVKNLD 304
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
D+IDD+RL + F+ G+ITSAK
Sbjct: 305 DNIDDKRLEEAFSVHGSITSAK 326
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 76/245 (31%), Positives = 137/245 (55%), Gaps = 20/245 (8%)
Query: 77 TERALDTMNFDALKGRPIR----IMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFS 132
ERA++ +N ++ R + I ++R RK N+++KN DN+ + + FS
Sbjct: 154 AERAIEKINNMIIRDRVVYVGKFIPKTERKSQARKVKFNNLYVKNFPPETDNEKLKEMFS 213
Query: 133 AFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKER 192
FG I S V +D +G SKG+GFV + + A ++ ++G + ++++ + ++ER
Sbjct: 214 EFGEIKSACVMKDNEGKSKGFGFVCYLDPDHAENAVRTMHGKEIEGRVLYCARAQRKEER 273
Query: 193 EKELGEKAK-----------LFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DG 240
++EL +K + L N+Y+KN ++ +D++L+E F +G+ITS +VM + +
Sbjct: 274 QEELKQKIEKQRAERQSNYMLNVNLYVKNLDDNIDDKRLEEAFSVHGSITSAKVMKDANN 333
Query: 241 KSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERL 300
+S+GFGFV + +PE A +AV NG + K LYV AQ+K +R +L + +RL
Sbjct: 334 RSKGFGFVCFANPEQAARAVTDMNGTIIGSKPLYVALAQRKEDRRAKLIEEHQ----QRL 389
Query: 301 NRYQG 305
+Y+
Sbjct: 390 AQYRA 394
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/227 (31%), Positives = 123/227 (54%), Gaps = 22/227 (9%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQD-EQGNSKGYGFVHFETEEAANKSIEK 170
++++ +L + + A+ FS G +LS +V +D S GYG+V+FE + A +++E
Sbjct: 14 SLYVGDLHPRVSDSALQAKFSEIGPVLSARVCRDLATRQSLGYGYVNFEDPKHAEQALEV 73
Query: 171 VNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTI 230
+N L + + I +R+ L + K N++IKN + ++L + F +G I
Sbjct: 74 LNYEPLMGRPI----RIMWSQRDPSLRKSGK--GNIFIKNLDKSIEQKELYDTFSFFGRI 127
Query: 231 TSYR-VMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAER-TQEL 288
S + VM+ +G+S+G+GFV +E E AE+A++ N + +++YVG+ K ER +Q
Sbjct: 128 LSCKIVMDENGQSKGYGFVHFEKEECAERAIEKINNMIIRDRVVYVGKFIPKTERKSQAR 187
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSA 335
K +F NLYVKN D+E+L++ F+ FG I SA
Sbjct: 188 KVKFN-------------NLYVKNFPPETDNEKLKEMFSEFGEIKSA 221
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 66/135 (48%), Gaps = 18/135 (13%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDG--KSRGFGFVAYESPEFAEKAVQ 261
+++Y+ + +D L+ F G + S RV + +S G+G+V +E P+ AE+A++
Sbjct: 13 SSLYVGDLHPRVSDSALQAKFSEIGPVLSARVCRDLATRQSLGYGYVNFEDPKHAEQALE 72
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDER 321
N + + G+ + + +Q+ L + N+++KNLD SI+ +
Sbjct: 73 VLNYEPLMGRPIRIMWSQRDPS----------------LRKSGKGNIFIKNLDKSIEQKE 116
Query: 322 LRKEFTPFGTITSAK 336
L F+ FG I S K
Sbjct: 117 LYDTFSFFGRILSCK 131
>gi|239615396|gb|EEQ92383.1| polyadenylate-binding protein [Ajellomyces dermatitidis ER-3]
gi|327356743|gb|EGE85600.1| polyadenylate-binding protein [Ajellomyces dermatitidis ATCC 18188]
Length = 783
Score = 321 bits (823), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 156/263 (59%), Positives = 198/263 (75%), Gaps = 2/263 (0%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D ERAL+ +N+ +KG+P RIMWSQRDP+LRK+G GNVFIKNLD +IDNKA++DTF+AFG
Sbjct: 108 DGERALEDLNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDTAIDNKALHDTFAAFG 167
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCKVAQDE GNSKGYGFVH+ET EAA +I+ VNGMLLN K VFVG I +K+R+ +
Sbjct: 168 NILSCKVAQDEFGNSKGYGFVHYETAEAATNAIKHVNGMLLNEKKVFVGHHIAKKDRQSK 227
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND--GKSRGFGFVAYESP 253
E FTNVY+KN + +E+ +E+F YG ITS + ++ GKSRGFGFV +
Sbjct: 228 FEEMKANFTNVYVKNLDTEVTNEEFRELFGKYGDITSASITHDSETGKSRGFGFVNFVKH 287
Query: 254 EFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNL 313
E A AV+ N KE G+ LYVGRAQKK ER +EL+++ E ++E+ ++YQGVNLYVKNL
Sbjct: 288 ESAAAAVEELNDKEFKGQKLYVGRAQKKHEREEELRKQHEAARVEKASKYQGVNLYVKNL 347
Query: 314 DDSIDDERLRKEFTPFGTITSAK 336
D IDDE+LR F FG ITSA+
Sbjct: 348 TDDIDDEKLRDLFIGFGNITSAR 370
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 83/141 (58%), Gaps = 11/141 (7%)
Query: 107 KSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQD-EQGNSKGYGFVHFETEEAAN 165
K+ NV++KNLD + N+ + F +G I S + D E G S+G+GFV+F E+A
Sbjct: 232 KANFTNVYVKNLDTEVTNEEFRELFGKYGDITSASITHDSETGKSRGFGFVNFVKHESAA 291
Query: 166 KSIEKVNGMLLNSKIVFVGKFIPRKEREKELG--------EKAKLF--TNVYIKNFGEDF 215
++E++N + ++VG+ + ERE+EL EKA + N+Y+KN +D
Sbjct: 292 AAVEELNDKEFKGQKLYVGRAQKKHEREEELRKQHEAARVEKASKYQGVNLYVKNLTDDI 351
Query: 216 NDEKLKEMFEPYGTITSYRVM 236
+DEKL+++F +G ITS RVM
Sbjct: 352 DDEKLRDLFIGFGNITSARVM 372
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 35/54 (64%)
Query: 240 GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFE 293
GKS+GFGFV + +P+ A KAV N + V+GK LYV AQ+K R +L+ +
Sbjct: 429 GKSKGFGFVCFSNPDEASKAVTEMNQRMVNGKPLYVALAQRKDVRKSQLEASIQ 482
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 61/135 (45%), Gaps = 18/135 (13%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQ 261
++Y+ + L E+F G + S RV + +S G+ +V Y + E+A++
Sbjct: 55 ASLYVGELDSSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALE 114
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDER 321
N + GK + +Q R L++ QG N+++KNLD +ID++
Sbjct: 115 DLNYTLIKGKPCRIMWSQ----RDPALRKTG-----------QG-NVFIKNLDTAIDNKA 158
Query: 322 LRKEFTPFGTITSAK 336
L F FG I S K
Sbjct: 159 LHDTFAAFGNILSCK 173
>gi|295674319|ref|XP_002797705.1| polyadenylate-binding protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226280355|gb|EEH35921.1| polyadenylate-binding protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 822
Score = 321 bits (823), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 157/263 (59%), Positives = 199/263 (75%), Gaps = 2/263 (0%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D ERAL+ +N+ +KG+P RIMWSQRDP+LRK+G GNVFIKNLD +IDNKA++DTF+AFG
Sbjct: 107 DGERALEDLNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDTAIDNKALHDTFAAFG 166
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCKVAQDE GNSKGYGFVH+ET EAA +I+ VNGMLLN K VFVG I +K+R+ +
Sbjct: 167 NILSCKVAQDEFGNSKGYGFVHYETAEAATNAIKHVNGMLLNEKKVFVGHHIAKKDRQSK 226
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM--NNDGKSRGFGFVAYESP 253
E FTNVY+KN + +E+ +E+FE YG ITS + N GKSRGFGFV + +
Sbjct: 227 FEEMKANFTNVYVKNLEPEVTNEEFRELFEKYGEITSASLSRDNETGKSRGFGFVNFVNH 286
Query: 254 EFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNL 313
+ A AV+ N KE G+ LYVGRAQKK ER +EL+++ E ++E+ ++YQGVNLYVKNL
Sbjct: 287 DSAAAAVEDLNDKEYKGQKLYVGRAQKKHEREEELRKQHEAARVEKASKYQGVNLYVKNL 346
Query: 314 DDSIDDERLRKEFTPFGTITSAK 336
D IDDE+LR F FG ITSA+
Sbjct: 347 TDDIDDEKLRDLFIGFGNITSAR 369
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 88/178 (49%), Gaps = 38/178 (21%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
N+++KNL ID++ + D F FG+I S +V +D G++ G + +EA+ + E V
Sbjct: 340 NLYVKNLTDDIDDEKLRDLFIGFGNITSARVMRDTIGDA---GSESEKEKEASKDNKENV 396
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTIT 231
++E +KE G GED + EK + +P
Sbjct: 397 -----------------KEETKKEAG--------------GED-SAEKTDKAEKPDTKKP 424
Query: 232 SYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELK 289
+ + + GKS+GFGFV + +P+ A KAV N + V+GK LYV AQ+K R +L+
Sbjct: 425 TDKKL---GKSKGFGFVCFSNPDEASKAVTEMNQRMVNGKPLYVALAQRKDVRKSQLE 479
Score = 44.7 bits (104), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 73/169 (43%), Gaps = 19/169 (11%)
Query: 171 VNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFT-NVYIKNFGEDFNDEKLKEMFEPYGT 229
NG +N+ +V G + A+ + ++Y+ + L E+F G
Sbjct: 20 TNGTTINTNVVTDGAADGNETPNSAAPTNAQPHSASLYVGELDPSVTEAMLFELFSSIGQ 79
Query: 230 ITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQE 287
+ S RV + +S G+ +V Y + E+A++ N + GK + +Q R
Sbjct: 80 VASIRVCRDAVTRRSLGYAYVNYNNTADGERALEDLNYTLIKGKPCRIMWSQ----RDPA 135
Query: 288 LKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
L++ QG N+++KNLD +ID++ L F FG I S K
Sbjct: 136 LRKTG-----------QG-NVFIKNLDTAIDNKALHDTFAAFGNILSCK 172
>gi|328852276|gb|EGG01423.1| hypothetical protein MELLADRAFT_39080 [Melampsora larici-populina
98AG31]
Length = 701
Score = 321 bits (822), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 154/262 (58%), Positives = 192/262 (73%), Gaps = 1/262 (0%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D ERAL+ +N+ +K + RIMWSQRDPSLRK+G GN+FIKNLD++IDNKA++DTF+AFG
Sbjct: 110 DAERALEQLNYSLIKNKACRIMWSQRDPSLRKTGQGNIFIKNLDETIDNKALHDTFAAFG 169
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
ILSCKVA D G SKGYGFVH+ T E+A +I+ VNGM LN K+VFVG +PR+ER+ +
Sbjct: 170 DILSCKVAMDSTGASKGYGFVHYVTAESAEAAIKGVNGMQLNDKVVFVGIHVPRRERQAK 229
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPE 254
+ E FTN+YIKN + E+L EMF YG +TS V ++ GK RGFGFV YE+ E
Sbjct: 230 IDEVRAHFTNLYIKNLPTEVTTEELNEMFSKYGPVTSAAVQADESGKHRGFGFVNYENHE 289
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A KAV+A + K+ G ILYV RAQK+ ER EL+R E K E +YQGVNLY+KNLD
Sbjct: 290 SASKAVEALHDKDYKGNILYVARAQKRVERDAELRRAHEQQKYETTLKYQGVNLYIKNLD 349
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
D DDE+L+ EF PFGTITS K
Sbjct: 350 DEYDDEKLQAEFLPFGTITSCK 371
Score = 140 bits (353), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 77/192 (40%), Positives = 117/192 (60%), Gaps = 11/192 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
N++IKNL + + + + FS +G + S V DE G +G+GFV++E E+A+K++E +
Sbjct: 239 NLYIKNLPTEVTTEELNEMFSKYGPVTSAAVQADESGKHRGFGFVNYENHESASKAVEAL 298
Query: 172 NGMLLNSKIVFVGKFIPRKEREKEL---GEKAKLFT-------NVYIKNFGEDFNDEKLK 221
+ I++V + R ER+ EL E+ K T N+YIKN ++++DEKL+
Sbjct: 299 HDKDYKGNILYVARAQKRVERDAELRRAHEQQKYETTLKYQGVNLYIKNLDDEYDDEKLQ 358
Query: 222 EMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
F P+GTITS +VM +D G SRGFGFV + +P+ A KAV NGK + K LYV AQ+
Sbjct: 359 AEFLPFGTITSCKVMKDDKGVSRGFGFVCFSAPDEATKAVAEMNGKMLGSKPLYVSLAQR 418
Query: 281 KAERTQELKRRF 292
K R Q+L+ +
Sbjct: 419 KDVRKQQLEAQM 430
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 68/103 (66%), Gaps = 5/103 (4%)
Query: 104 SLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEA 163
+L+ GV N++IKNLD D++ + F FG+I SCKV +D++G S+G+GFV F +
Sbjct: 335 TLKYQGV-NLYIKNLDDEYDDEKLQAEFLPFGTITSCKVMKDDKGVSRGFGFVCFSAPDE 393
Query: 164 ANKSIEKVNGMLLNSKIVFVG----KFIPRKEREKELGEKAKL 202
A K++ ++NG +L SK ++V K + +++ E ++ ++A++
Sbjct: 394 ATKAVAEMNGKMLGSKPLYVSLAQRKDVRKQQLEAQMSQRAQM 436
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 64/135 (47%), Gaps = 18/135 (13%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQ 261
T++Y+ + L E+F G ++S RV + +S G+ +V Y + AE+A++
Sbjct: 57 TSLYVGELDPTVTEAMLYEIFSMIGPVSSIRVCRDAVTRRSLGYAYVNYLNAADAERALE 116
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDER 321
N + K + +Q R L++ QG N+++KNLD++ID++
Sbjct: 117 QLNYSLIKNKACRIMWSQ----RDPSLRKTG-----------QG-NIFIKNLDETIDNKA 160
Query: 322 LRKEFTPFGTITSAK 336
L F FG I S K
Sbjct: 161 LHDTFAAFGDILSCK 175
>gi|417399827|gb|JAA46899.1| Putative polyadenylate-binding protein rrm superfamily [Desmodus
rotundus]
Length = 370
Score = 321 bits (822), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 153/264 (57%), Positives = 210/264 (79%), Gaps = 2/264 (0%)
Query: 74 MLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSA 133
+ D ++ LDTMNFD ++G+ IR+MWSQRD LRKSG+GNVFIKNLD+SIDNK +Y+ FSA
Sbjct: 61 LADAQKVLDTMNFDMIQGKSIRLMWSQRDAYLRKSGIGNVFIKNLDRSIDNKMLYEHFSA 120
Query: 134 FGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKERE 193
FG ILS KV D++G S+GY FVHF+++ AA+++IE++NG LL + +FVG F RKERE
Sbjct: 121 FGKILSSKVMSDDKG-SRGYAFVHFQSQSAADRAIEEMNGALLKNCRLFVGPFKNRKERE 179
Query: 194 KELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYES 252
EL KA FTNVYIKNFG+D +DE+LKE+F YG I S +VM ++ GKS+GFGFV++++
Sbjct: 180 AELQNKANEFTNVYIKNFGDDMDDERLKEVFSQYGKIVSVKVMTDSSGKSKGFGFVSFDT 239
Query: 253 PEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKN 312
E A++AV+ NGK++ G++++VGRAQKKAER ELK+ FE LK ER R +GV LY+KN
Sbjct: 240 HEAAQRAVEYMNGKDICGQMVFVGRAQKKAERQAELKQMFEQLKRERFGRCRGVKLYIKN 299
Query: 313 LDDSIDDERLRKEFTPFGTITSAK 336
LD++ID+E+LR+ F+ FG+++ K
Sbjct: 300 LDETIDEEQLRRAFSSFGSMSRVK 323
Score = 127 bits (319), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 65/179 (36%), Positives = 108/179 (60%), Gaps = 10/179 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV+IKN +D++ + + FS +G I+S KV D G SKG+GFV F+T EAA +++E +
Sbjct: 191 NVYIKNFGDDMDDERLKEVFSQYGKIVSVKVMTDSSGKSKGFGFVSFDTHEAAQRAVEYM 250
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGE-----KAKLF-----TNVYIKNFGEDFNDEKLK 221
NG + ++VFVG+ + ER+ EL + K + F +YIKN E ++E+L+
Sbjct: 251 NGKDICGQMVFVGRAQKKAERQAELKQMFEQLKRERFGRCRGVKLYIKNLDETIDEEQLR 310
Query: 222 EMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
F +G+++ +VM +G+S+GFG + + PE A KA+ NG+ + K + + AQ+
Sbjct: 311 RAFSSFGSMSRVKVMEEEGRSKGFGLICFSCPEEATKAMAEMNGQVLGSKAINIALAQR 369
Score = 100 bits (249), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 117/227 (51%), Gaps = 17/227 (7%)
Query: 111 GNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQD-EQGNSKGYGFVHFETEEAANKSIE 169
++++ +L + ++ F+ G +LS ++ +D S GY +V+F A K ++
Sbjct: 10 ASLYVGDLPADVTEDMLFRKFNPVGPVLSIRICRDLVTRRSLGYAYVNFLNLADAQKVLD 69
Query: 170 KVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGT 229
+N ++ GK I +++ + NV+IKN +++ L E F +G
Sbjct: 70 TMNFDMIQ------GKSIRLMWSQRDAYLRKSGIGNVFIKNLDRSIDNKMLYEHFSAFGK 123
Query: 230 ITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELK 289
I S +VM++D SRG+ FV ++S A++A++ NG + L+VG + + ER EL+
Sbjct: 124 ILSSKVMSDDKGSRGYAFVHFQSQSAADRAIEEMNGALLKNCRLFVGPFKNRKEREAELQ 183
Query: 290 RRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ N + N+Y+KN D +DDERL++ F+ +G I S K
Sbjct: 184 --------NKANEF--TNVYIKNFGDDMDDERLKEVFSQYGKIVSVK 220
>gi|320581683|gb|EFW95902.1| Poly(A) binding protein [Ogataea parapolymorpha DL-1]
Length = 629
Score = 321 bits (822), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 151/262 (57%), Positives = 202/262 (77%), Gaps = 1/262 (0%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D E+AL+ +N+ +KG+ RIMWSQRDPSLR++G GN+FIKNL +IDNK ++DTFSAFG
Sbjct: 100 DGEKALEELNYTPIKGKACRIMWSQRDPSLRRNGSGNIFIKNLHPAIDNKTLHDTFSAFG 159
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
ILSCK+A DE GNSKG+GFVH+E E+A +IE VNGMLLN V+VG + +K+R+ +
Sbjct: 160 KILSCKIATDENGNSKGFGFVHYEESESAKAAIENVNGMLLNDHEVYVGPHLAKKDRQSK 219
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITS-YRVMNNDGKSRGFGFVAYESPE 254
+ E FTNVY+KN +++++KL+E F P+GTI+S + + GKSRGFGFV +E E
Sbjct: 220 MRELIANFTNVYVKNINLNWDEDKLRETFSPFGTISSIFLSKDESGKSRGFGFVNFEKHE 279
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A KAV+ N K++DG+ LYVGRAQKK+ER + LK ++E + E+LN+YQG NL+VKNLD
Sbjct: 280 DAVKAVEELNNKDIDGQKLYVGRAQKKSERMESLKHQYEAARQEQLNKYQGYNLFVKNLD 339
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
DSIDD +L +EF P+GTITSAK
Sbjct: 340 DSIDDAKLEEEFKPYGTITSAK 361
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 77/202 (38%), Positives = 125/202 (61%), Gaps = 11/202 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV++KN++ + D + +TFS FG+I S +++DE G S+G+GFV+FE E A K++E++
Sbjct: 229 NVYVKNINLNWDEDKLRETFSPFGTISSIFLSKDESGKSRGFGFVNFEKHEDAVKAVEEL 288
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLFT----------NVYIKNFGEDFNDEKLK 221
N ++ + ++VG+ + ER + L + + N+++KN + +D KL+
Sbjct: 289 NNKDIDGQKLYVGRAQKKSERMESLKHQYEAARQEQLNKYQGYNLFVKNLDDSIDDAKLE 348
Query: 222 EMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
E F+PYGTITS +VM +D GKS+GFGFV Y SPE A KA+ + + V GK LYV AQ+
Sbjct: 349 EEFKPYGTITSAKVMLDDAGKSKGFGFVCYSSPEEATKAITEMHQRMVAGKPLYVALAQR 408
Query: 281 KAERTQELKRRFEMLKIERLNR 302
K R +L ++ + R+ +
Sbjct: 409 KEVRRSQLSQQIQARNQMRMQQ 430
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 119/227 (52%), Gaps = 18/227 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
+ ++++ LD S+ +++ FS G + + +V +D S GY +V+F++ K++
Sbjct: 46 LASLYVGELDPSVTESDLFEVFSPIGQVSTIRVCRDAVSKQSLGYAYVNFQSHADGEKAL 105
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
E++N + K I +R+ L N++IKN +++ L + F +G
Sbjct: 106 EELNYTPIKGKAC----RIMWSQRDPSLRRNGS--GNIFIKNLHPAIDNKTLHDTFSAFG 159
Query: 229 TITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQE 287
I S ++ ++ G S+GFGFV YE E A+ A++ NG ++ +YVG K +R +
Sbjct: 160 KILSCKIATDENGNSKGFGFVHYEESESAKAAIENVNGMLLNDHEVYVGPHLAKKDRQSK 219
Query: 288 LKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITS 334
++ N+YVKN++ + D+++LR+ F+PFGTI+S
Sbjct: 220 MRELIANF----------TNVYVKNINLNWDEDKLRETFSPFGTISS 256
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 65/144 (45%), Gaps = 18/144 (12%)
Query: 195 ELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYES 252
E + ++ ++Y+ + L E+F P G +++ RV + +S G+ +V ++S
Sbjct: 38 ESTQNSETLASLYVGELDPSVTESDLFEVFSPIGQVSTIRVCRDAVSKQSLGYAYVNFQS 97
Query: 253 PEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKN 312
EKA++ N + GK + +Q+ L R N+++KN
Sbjct: 98 HADGEKALEELNYTPIKGKACRIMWSQRDPS----------------LRRNGSGNIFIKN 141
Query: 313 LDDSIDDERLRKEFTPFGTITSAK 336
L +ID++ L F+ FG I S K
Sbjct: 142 LHPAIDNKTLHDTFSAFGKILSCK 165
>gi|226287551|gb|EEH43064.1| polyadenylate-binding protein [Paracoccidioides brasiliensis Pb18]
Length = 761
Score = 320 bits (821), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 157/263 (59%), Positives = 199/263 (75%), Gaps = 2/263 (0%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D ERAL+ +N+ +KG+P RIMWSQRDP+LRK+G GNVFIKNLD +IDNKA++DTF+AFG
Sbjct: 107 DGERALEDLNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDTAIDNKALHDTFAAFG 166
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCKVAQDE GNSKGYGFVH+ET EAA +I+ VNGMLLN K VFVG I +K+R+ +
Sbjct: 167 NILSCKVAQDEFGNSKGYGFVHYETAEAATNAIKHVNGMLLNEKKVFVGHHIAKKDRQSK 226
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM--NNDGKSRGFGFVAYESP 253
E FTNVY+KN + +E+ +E+FE YG ITS + N GKSRGFGFV + +
Sbjct: 227 FEEMKANFTNVYVKNLEPEVTNEEFRELFEKYGEITSASLSRDNETGKSRGFGFVNFVNH 286
Query: 254 EFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNL 313
+ A AV+ N KE G+ LYVGRAQKK ER +EL+++ E ++E+ ++YQGVNLYVKNL
Sbjct: 287 DSAAAAVEDLNDKEYKGQKLYVGRAQKKHEREEELRKQHEAARVEKASKYQGVNLYVKNL 346
Query: 314 DDSIDDERLRKEFTPFGTITSAK 336
D IDDE+LR F FG ITSA+
Sbjct: 347 TDDIDDEKLRDLFIGFGNITSAR 369
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 87/178 (48%), Gaps = 38/178 (21%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
N+++KNL ID++ + D F FG+I S +V +D ++ G + +EA+ + E V
Sbjct: 340 NLYVKNLTDDIDDEKLRDLFIGFGNITSARVMRDTISDA---GSESEKEKEASKDNKENV 396
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTIT 231
++E +KE G GED + EK + +P
Sbjct: 397 -----------------KEETKKEAG--------------GED-SAEKTDKAEKPDTKKP 424
Query: 232 SYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELK 289
+ + + GKS+GFGFV + +P+ A KAV N + V+GK LYV AQ+K R +L+
Sbjct: 425 TDKKL---GKSKGFGFVCFSNPDEASKAVTEMNQRMVNGKPLYVALAQRKDVRKSQLE 479
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 61/135 (45%), Gaps = 18/135 (13%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQ 261
++Y+ + L E+F G + S RV + +S G+ +V Y + E+A++
Sbjct: 54 ASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALE 113
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDER 321
N + GK + +Q R L++ QG N+++KNLD +ID++
Sbjct: 114 DLNYTLIKGKPCRIMWSQ----RDPALRKTG-----------QG-NVFIKNLDTAIDNKA 157
Query: 322 LRKEFTPFGTITSAK 336
L F FG I S K
Sbjct: 158 LHDTFAAFGNILSCK 172
>gi|340939192|gb|EGS19814.1| hypothetical protein CTHT_0042990 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 777
Score = 320 bits (820), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 152/264 (57%), Positives = 200/264 (75%), Gaps = 1/264 (0%)
Query: 74 MLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSA 133
+ D E+AL+ +N+ +KG+P RIMWSQRDP+LRK+G GN+FIKNLD +IDNKA++DTF+A
Sbjct: 119 VADGEKALEELNYTLIKGKPCRIMWSQRDPALRKTGHGNIFIKNLDAAIDNKALHDTFAA 178
Query: 134 FGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKERE 193
FG+ILSCKVA DE GNSKGYGFVH+ET+EAA ++I+ VNGMLLN K V+VG IP+K+R+
Sbjct: 179 FGNILSCKVATDENGNSKGYGFVHYETDEAAAQAIKHVNGMLLNEKKVYVGYHIPKKDRQ 238
Query: 194 KELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGKSRGFGFVAYES 252
+ E +TNVYIKN + +E+ +E F +G ITS + + +GK RGFGFV Y +
Sbjct: 239 SKFEEMKANYTNVYIKNINLEVTEEEFREFFSKWGEITSSTLARDAEGKPRGFGFVNYST 298
Query: 253 PEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKN 312
A K V+ NGKE G+ LYVGRAQKK ER +EL++ +E ++E+ N+YQGVNLY+KN
Sbjct: 299 HASAAKCVEEMNGKEWRGQELYVGRAQKKHEREEELRKSYEAARLEKQNKYQGVNLYIKN 358
Query: 313 LDDSIDDERLRKEFTPFGTITSAK 336
L D +DDE+LR F FG ITSAK
Sbjct: 359 LSDEVDDEKLRAMFAEFGPITSAK 382
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/261 (31%), Positives = 131/261 (50%), Gaps = 56/261 (21%)
Query: 107 KSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANK 166
K+ NV+IKN++ + + + FS +G I S +A+D +G +G+GFV++ T +A K
Sbjct: 245 KANYTNVYIKNINLEVTEEEFREFFSKWGEITSSTLARDAEGKPRGFGFVNYSTHASAAK 304
Query: 167 SIEKVNGMLLNSKIVFVGKFIPRKEREKELG---EKAKL-------FTNVYIKNFGEDFN 216
+E++NG + ++VG+ + ERE+EL E A+L N+YIKN ++ +
Sbjct: 305 CVEEMNGKEWRGQELYVGRAQKKHEREEELRKSYEAARLEKQNKYQGVNLYIKNLSDEVD 364
Query: 217 DEKLKEMFEPYGTITSYRVM---------------NND---------------------- 239
DEKL+ MF +G ITS +VM NN
Sbjct: 365 DEKLRAMFAEFGPITSAKVMRDTPPEPAKDEKNKENNKESEKEGEKKEGEGEGDKKPEVK 424
Query: 240 ------GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFE 293
GKS+GFGFV + +P+ A KAV N + VDGK LYV AQ+K R +L+ +
Sbjct: 425 KPERKLGKSKGFGFVCFANPDDATKAVAEMNQRMVDGKPLYVALAQRKEVRKSQLEASIQ 484
Query: 294 ---MLKIERLNRYQGVNLYVK 311
L++++ G+ Y++
Sbjct: 485 ARNQLRMQQQAAQAGLPQYMQ 505
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 59/135 (43%), Gaps = 18/135 (13%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQ 261
++Y+ + L E+F G++ S RV + +S G+ +V Y S EKA++
Sbjct: 68 ASLYVGELDPSVTEAMLFELFSQIGSVASIRVCRDAVTRRSLGYAYVNYNSVADGEKALE 127
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDER 321
N + GK + +Q+ L + N+++KNLD +ID++
Sbjct: 128 ELNYTLIKGKPCRIMWSQRDPA----------------LRKTGHGNIFIKNLDAAIDNKA 171
Query: 322 LRKEFTPFGTITSAK 336
L F FG I S K
Sbjct: 172 LHDTFAAFGNILSCK 186
>gi|225678061|gb|EEH16345.1| polyadenylate-binding protein [Paracoccidioides brasiliensis Pb03]
Length = 755
Score = 320 bits (820), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 157/263 (59%), Positives = 199/263 (75%), Gaps = 2/263 (0%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D ERAL+ +N+ +KG+P RIMWSQRDP+LRK+G GNVFIKNLD +IDNKA++DTF+AFG
Sbjct: 107 DGERALEDLNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDTAIDNKALHDTFAAFG 166
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCKVAQDE GNSKGYGFVH+ET EAA +I+ VNGMLLN K VFVG I +K+R+ +
Sbjct: 167 NILSCKVAQDEFGNSKGYGFVHYETAEAATNAIKHVNGMLLNEKKVFVGHHIAKKDRQSK 226
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM--NNDGKSRGFGFVAYESP 253
E FTNVY+KN + +E+ +E+FE YG ITS + N GKSRGFGFV + +
Sbjct: 227 FEEMKANFTNVYVKNLEPEVTNEEFRELFEKYGEITSASLSRDNETGKSRGFGFVNFVNH 286
Query: 254 EFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNL 313
+ A AV+ N KE G+ LYVGRAQKK ER +EL+++ E ++E+ ++YQGVNLYVKNL
Sbjct: 287 DSAAAAVEDLNDKEYKGQKLYVGRAQKKHEREEELRKQHEAARVEKASKYQGVNLYVKNL 346
Query: 314 DDSIDDERLRKEFTPFGTITSAK 336
D IDDE+LR F FG ITSA+
Sbjct: 347 TDDIDDEKLRDLFIGFGNITSAR 369
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/178 (31%), Positives = 88/178 (49%), Gaps = 38/178 (21%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
N+++KNL ID++ + D F FG+I S +V +D G++ G + +EA+ + E V
Sbjct: 340 NLYVKNLTDDIDDEKLRDLFIGFGNITSARVMRDTIGDA---GSESEKEKEASKDNKENV 396
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTIT 231
R+E +KE G GED + EK + +P
Sbjct: 397 -----------------REETKKEAG--------------GED-SAEKTDKAEKPDTKKP 424
Query: 232 SYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELK 289
+ + + GKS+GFGFV + +P+ A KAV N + V+GK LYV AQ+K R +L+
Sbjct: 425 TDKKL---GKSKGFGFVCFSNPDEASKAVTEMNQRMVNGKPLYVALAQRKDVRKSQLE 479
Score = 44.7 bits (104), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 61/135 (45%), Gaps = 18/135 (13%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQ 261
++Y+ + L E+F G + S RV + +S G+ +V Y + E+A++
Sbjct: 54 ASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALE 113
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDER 321
N + GK + +Q R L++ QG N+++KNLD +ID++
Sbjct: 114 DLNYTLIKGKPCRIMWSQ----RDPALRKTG-----------QG-NVFIKNLDTAIDNKA 157
Query: 322 LRKEFTPFGTITSAK 336
L F FG I S K
Sbjct: 158 LHDTFAAFGNILSCK 172
>gi|168057049|ref|XP_001780529.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668007|gb|EDQ54623.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 647
Score = 320 bits (820), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 159/262 (60%), Positives = 199/262 (75%), Gaps = 3/262 (1%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D RAL+ +NF + G+PIRIM+S RDPSLRKSG N+FIKNLDK+IDNKA++DTFSAFG
Sbjct: 77 DATRALELLNFTPVNGKPIRIMFSHRDPSLRKSGAANIFIKNLDKAIDNKALHDTFSAFG 136
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
ILSCKVA D G SKGYGFV FE EE+A +IEKVNGMLLN K VFVG F+ R+ER +
Sbjct: 137 GILSCKVATDSSGQSKGYGFVQFEKEESAQSAIEKVNGMLLNDKQVFVGPFVRRQER--D 194
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPE 254
L F NVY+KN GE+ D++LK++F YG I+S VM +N+GKS+ FGFV +E +
Sbjct: 195 LSGGVSKFNNVYVKNLGENTTDDELKKVFGAYGPISSAVVMRDNEGKSKCFGFVNFELAD 254
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A KAV+A NGK+ D K YVGRAQKK+ER EL+ +FE + R+ +YQGVNLY+KNLD
Sbjct: 255 DAAKAVEALNGKKQDEKEWYVGRAQKKSEREAELRAKFEQERKSRIEKYQGVNLYLKNLD 314
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
D++DDE+LR+ F +GTITS K
Sbjct: 315 DAVDDEKLRELFAEYGTITSCK 336
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 84/210 (40%), Positives = 121/210 (57%), Gaps = 15/210 (7%)
Query: 100 QRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFE 159
+RD S S NV++KNL ++ + + F A+G I S V +D +G SK +GFV+FE
Sbjct: 192 ERDLSGGVSKFNNVYVKNLGENTTDDELKKVFGAYGPISSAVVMRDNEGKSKCFGFVNFE 251
Query: 160 TEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKL------------FTNVY 207
+ A K++E +NG + K +VG+ + ERE EL +AK N+Y
Sbjct: 252 LADDAAKAVEALNGKKQDEKEWYVGRAQKKSEREAEL--RAKFEQERKSRIEKYQGVNLY 309
Query: 208 IKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGK 266
+KN + +DEKL+E+F YGTITS +VM + G+SRG GFVA+ +PE A +AV N K
Sbjct: 310 LKNLDDAVDDEKLRELFAEYGTITSCKVMKDPQGQSRGSGFVAFSTPEEATRAVTEMNTK 369
Query: 267 EVDGKILYVGRAQKKAERTQELKRRFEMLK 296
V K LYV AQ+K ER L+ F ++
Sbjct: 370 MVGSKPLYVALAQRKEERRVRLQAAFAQMR 399
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 125/226 (55%), Gaps = 20/226 (8%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSIEK 170
+V++ +L+ ++ +Y+ FS G ++S +V +D S GY +V++ + + A +++E
Sbjct: 25 SVYVGDLEHNVSEAQLYEIFSQTGPVVSIRVCRDLITRRSLGYAYVNYHSAQDATRALEL 84
Query: 171 VNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTI 230
+N +N K + + F R ++ G N++IKN + +++ L + F +G I
Sbjct: 85 LNFTPVNGKPIRI-MFSHRDPSLRKSGA-----ANIFIKNLDKAIDNKALHDTFSAFGGI 138
Query: 231 TSYRV-MNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELK 289
S +V ++ G+S+G+GFV +E E A+ A++ NG ++ K ++VG ++ ER +L
Sbjct: 139 LSCKVATDSSGQSKGYGFVQFEKEESAQSAIEKVNGMLLNDKQVFVGPFVRRQER--DLS 196
Query: 290 RRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSA 335
+ + N N+YVKNL ++ D+ L+K F +G I+SA
Sbjct: 197 G-----GVSKFN-----NVYVKNLGENTTDDELKKVFGAYGPISSA 232
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 66/135 (48%), Gaps = 18/135 (13%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQ 261
T+VY+ + + ++ +L E+F G + S RV + +S G+ +V Y S + A +A++
Sbjct: 24 TSVYVGDLEHNVSEAQLYEIFSQTGPVVSIRVCRDLITRRSLGYAYVNYHSAQDATRALE 83
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDER 321
N V+GK + + + + L + N+++KNLD +ID++
Sbjct: 84 LLNFTPVNGKPIRIMFSHRDPS----------------LRKSGAANIFIKNLDKAIDNKA 127
Query: 322 LRKEFTPFGTITSAK 336
L F+ FG I S K
Sbjct: 128 LHDTFSAFGGILSCK 142
>gi|261199248|ref|XP_002626025.1| polyadenylate-binding protein [Ajellomyces dermatitidis SLH14081]
gi|239594233|gb|EEQ76814.1| polyadenylate-binding protein [Ajellomyces dermatitidis SLH14081]
Length = 783
Score = 320 bits (820), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 156/263 (59%), Positives = 197/263 (74%), Gaps = 2/263 (0%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D ERAL+ +N+ +KG+P RIMWSQRDP+LRK+G GNVFIKNLD +IDNKA++DTF+AFG
Sbjct: 108 DGERALEDLNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDTAIDNKALHDTFAAFG 167
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCKVAQDE GNSKGYGFVH+ET EAA +I+ VNGMLLN K VFVG I +K+R+ +
Sbjct: 168 NILSCKVAQDEFGNSKGYGFVHYETAEAATNAIKHVNGMLLNEKKVFVGHHIAKKDRQSK 227
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND--GKSRGFGFVAYESP 253
E FTNVY+KN +E+ +E+F YG ITS + ++ GKSRGFGFV +
Sbjct: 228 FEEMKANFTNVYVKNLDTKVTNEEFRELFGKYGDITSASITHDSETGKSRGFGFVNFVKH 287
Query: 254 EFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNL 313
E A AV+ N KE G+ LYVGRAQKK ER +EL+++ E ++E+ ++YQGVNLYVKNL
Sbjct: 288 ESAAAAVEELNDKEFKGQKLYVGRAQKKHEREEELRKQHEAARVEKASKYQGVNLYVKNL 347
Query: 314 DDSIDDERLRKEFTPFGTITSAK 336
D IDDE+LR F FG ITSA+
Sbjct: 348 TDDIDDEKLRDLFIGFGNITSAR 370
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 83/141 (58%), Gaps = 11/141 (7%)
Query: 107 KSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQD-EQGNSKGYGFVHFETEEAAN 165
K+ NV++KNLD + N+ + F +G I S + D E G S+G+GFV+F E+A
Sbjct: 232 KANFTNVYVKNLDTKVTNEEFRELFGKYGDITSASITHDSETGKSRGFGFVNFVKHESAA 291
Query: 166 KSIEKVNGMLLNSKIVFVGKFIPRKEREKELG--------EKAKLF--TNVYIKNFGEDF 215
++E++N + ++VG+ + ERE+EL EKA + N+Y+KN +D
Sbjct: 292 AAVEELNDKEFKGQKLYVGRAQKKHEREEELRKQHEAARVEKASKYQGVNLYVKNLTDDI 351
Query: 216 NDEKLKEMFEPYGTITSYRVM 236
+DEKL+++F +G ITS RVM
Sbjct: 352 DDEKLRDLFIGFGNITSARVM 372
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 34/50 (68%)
Query: 240 GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELK 289
GKS+GFGFV + +P+ A KAV N + V+GK LYV AQ+K R +L+
Sbjct: 429 GKSKGFGFVCFSNPDEASKAVTEMNQRMVNGKPLYVALAQRKDVRKSQLE 478
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 61/135 (45%), Gaps = 18/135 (13%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQ 261
++Y+ + L E+F G + S RV + +S G+ +V Y + E+A++
Sbjct: 55 ASLYVGELDSSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALE 114
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDER 321
N + GK + +Q R L++ QG N+++KNLD +ID++
Sbjct: 115 DLNYTLIKGKPCRIMWSQ----RDPALRKTG-----------QG-NVFIKNLDTAIDNKA 158
Query: 322 LRKEFTPFGTITSAK 336
L F FG I S K
Sbjct: 159 LHDTFAAFGNILSCK 173
>gi|296226907|ref|XP_002759113.1| PREDICTED: polyadenylate-binding protein 1-like isoform 1
[Callithrix jacchus]
Length = 604
Score = 320 bits (819), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 167/275 (60%), Positives = 195/275 (70%), Gaps = 36/275 (13%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD +KG+P+RIMWSQRDPSLRKSGV
Sbjct: 53 GYAYVNFQQP--ADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGV------------ 98
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
C DE G KGYGFVHFET+EAA ++IEK+NGMLLN + VF
Sbjct: 99 ----------------VC----DENG-PKGYGFVHFETQEAAERAIEKMNGMLLNDRKVF 137
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GK 241
VG F RKERE ELG +AK FTNVYIKNFGED +DE LK++F +G S +VM ++ GK
Sbjct: 138 VGPFKSRKEREAELGARAKEFTNVYIKNFGEDMDDEHLKDLFGKFGPALSVKVMTDESGK 197
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
S+GFGFV++E E A+KAV NGKE++GK +YVGRAQKK ER ELKR+FE +K +R+
Sbjct: 198 SKGFGFVSFERHEDAQKAVDVMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRIT 257
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLYVKNLDD IDDERLRKEF+PFGTITSAK
Sbjct: 258 RYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAK 292
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 102/275 (37%), Positives = 145/275 (52%), Gaps = 31/275 (11%)
Query: 41 LIDGNTVKYDWD--------SGYTCHQLGS---GAILVQLGQPYMLDTERALDTMNFDAL 89
+I G V+ W SG C + G G + + + ERA++ MN L
Sbjct: 76 VIKGKPVRIMWSQRDPSLRKSGVVCDENGPKGYGFVHFETQE----AAERAIEKMNGMLL 131
Query: 90 KGRPIRI----MWSQRDPSL--RKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVA 143
R + + +R+ L R NV+IKN + +D++ + D F FG LS KV
Sbjct: 132 NDRKVFVGPFKSRKEREAELGARAKEFTNVYIKNFGEDMDDEHLKDLFGKFGPALSVKVM 191
Query: 144 QDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLF 203
DE G SKG+GFV FE E A K+++ +NG LN K ++VG+ + ER+ EL K +
Sbjct: 192 TDESGKSKGFGFVSFERHEDAQKAVDVMNGKELNGKQIYVGRAQKKVERQTELKRKFEQM 251
Query: 204 ----------TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDGKSRGFGFVAYESP 253
N+Y+KN + +DE+L++ F P+GTITS +VM G+S+GFGFV + SP
Sbjct: 252 KQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSP 311
Query: 254 EFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
E A KAV NG+ V K LYV AQ+K ER L
Sbjct: 312 EEATKAVTEMNGRIVATKPLYVALAQRKEERQAHL 346
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 81/154 (52%), Gaps = 26/154 (16%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQR-----------------DPSLRKSGVGNVFIKNL 118
D ++A+D MN L G+ I + +Q+ D R GV N+++KNL
Sbjct: 211 DAQKAVDVMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGV-NLYVKNL 269
Query: 119 DKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNS 178
D ID++ + FS FG+I S KV E G SKG+GFV F + E A K++ ++NG ++ +
Sbjct: 270 DDGIDDERLRKEFSPFGTITSAKVMM-EGGRSKGFGFVCFSSPEEATKAVTEMNGRIVAT 328
Query: 179 KIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFG 212
K ++V ++ER+ L TN+Y++
Sbjct: 329 KPLYVALAQRKEERQAHL-------TNLYMQRMA 355
>gi|402225283|gb|EJU05344.1| polyadenylate binding protein [Dacryopinax sp. DJM-731 SS1]
Length = 716
Score = 320 bits (819), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 146/262 (55%), Positives = 202/262 (77%), Gaps = 1/262 (0%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D ERALD +N+ ++G+P RIMWSQRDP LRK+G GN+FIKNLD+ IDNKA++DTF+AFG
Sbjct: 127 DGERALDQLNYSQIRGKPCRIMWSQRDPGLRKTGQGNIFIKNLDQGIDNKALHDTFAAFG 186
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
++LSCKVA D+ G SKGYGFVH+++ EAA +I+ VNGMLLN K VFVG+ I RKER+ +
Sbjct: 187 TVLSCKVATDDSGLSKGYGFVHYDSNEAAEAAIKAVNGMLLNDKKVFVGQHISRKERQSK 246
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPE 254
+ E FTN+Y+KN + +E+ + +F +G ITS + + +G S+GFGFV +E+ E
Sbjct: 247 IDEMKSHFTNLYVKNLDTEVGEEEFEGLFSQFGPITSAVIQKDEEGNSKGFGFVNFENHE 306
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A++AV+ + KE+ GK ++VGRAQKK+ER +EL++++E K E+ +YQG NLY+KNL+
Sbjct: 307 DAQRAVEELDNKEIHGKPVFVGRAQKKSEREEELRKQYEQAKYEKAGKYQGSNLYIKNLE 366
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
D +DDE+LR EF PFGTITS K
Sbjct: 367 DDVDDEKLRAEFEPFGTITSCK 388
Score = 154 bits (388), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 89/212 (41%), Positives = 131/212 (61%), Gaps = 12/212 (5%)
Query: 107 KSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANK 166
KS N+++KNLD + + FS FG I S + +DE+GNSKG+GFV+FE E A +
Sbjct: 251 KSHFTNLYVKNLDTEVGEEEFEGLFSQFGPITSAVIQKDEEGNSKGFGFVNFENHEDAQR 310
Query: 167 SIEKVNGMLLNSKIVFVGKFIPRKEREKELG--------EKAKLF--TNVYIKNFGEDFN 216
++E+++ ++ K VFVG+ + ERE+EL EKA + +N+YIKN +D +
Sbjct: 311 AVEELDNKEIHGKPVFVGRAQKKSEREEELRKQYEQAKYEKAGKYQGSNLYIKNLEDDVD 370
Query: 217 DEKLKEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYV 275
DEKL+ FEP+GTITS +VM ++ G S+GFGFV + SP+ A +A+ N K V K LYV
Sbjct: 371 DEKLRAEFEPFGTITSCKVMRDEKGTSKGFGFVCFSSPDEATRAMSEMNNKIVGTKPLYV 430
Query: 276 GRAQKKAERTQELKRRFEMLKIE-RLNRYQGV 306
AQ+K R Q+L+ + + RL QG+
Sbjct: 431 ALAQRKDVRKQQLESQIAQRNNQLRLAAAQGI 462
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 72/124 (58%), Gaps = 16/124 (12%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQ----RDPSLRKS------------GVGNVFIKNLD 119
D +RA++ ++ + G+P+ + +Q R+ LRK N++IKNL+
Sbjct: 307 DAQRAVEELDNKEIHGKPVFVGRAQKKSEREEELRKQYEQAKYEKAGKYQGSNLYIKNLE 366
Query: 120 KSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSK 179
+D++ + F FG+I SCKV +DE+G SKG+GFV F + + A +++ ++N ++ +K
Sbjct: 367 DDVDDEKLRAEFEPFGTITSCKVMRDEKGTSKGFGFVCFSSPDEATRAMSEMNNKIVGTK 426
Query: 180 IVFV 183
++V
Sbjct: 427 PLYV 430
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 61/134 (45%), Gaps = 18/134 (13%)
Query: 205 NVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQA 262
++Y+ + L E+F G + S RV + +S G+ +V Y + E+A+
Sbjct: 75 SLYVGELDPQVTEAMLFEIFNMIGPVASVRVCRDAVTRRSLGYAYVNYLNYNDGERALDQ 134
Query: 263 WNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERL 322
N ++ GK + +Q R L++ QG N+++KNLD ID++ L
Sbjct: 135 LNYSQIRGKPCRIMWSQ----RDPGLRKTG-----------QG-NIFIKNLDQGIDNKAL 178
Query: 323 RKEFTPFGTITSAK 336
F FGT+ S K
Sbjct: 179 HDTFAAFGTVLSCK 192
>gi|342879464|gb|EGU80711.1| hypothetical protein FOXB_08751 [Fusarium oxysporum Fo5176]
Length = 794
Score = 320 bits (819), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 156/262 (59%), Positives = 207/262 (79%), Gaps = 1/262 (0%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D E+AL+ +N+ +KGRP RIMWSQRDP+LRK+G GNVFIKNLD +IDNKA++DTF+AFG
Sbjct: 112 DGEKALEELNYTLIKGRPCRIMWSQRDPALRKNGQGNVFIKNLDVAIDNKALHDTFAAFG 171
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCKVAQDE GNSKGYGFVH+ET+EAA+++I+ VNGMLLN K V+VG IP+K+R+ +
Sbjct: 172 NILSCKVAQDENGNSKGYGFVHYETDEAASQAIKHVNGMLLNEKKVYVGHHIPKKDRQSK 231
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPE 254
E FTNVY+KN D ++ +E+FE +G +TS + + +GKSRGFGFV + + E
Sbjct: 232 FEEMKANFTNVYVKNIAPDVTEDDFRELFEKFGDVTSSSLARDQEGKSRGFGFVNFTTHE 291
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A KAV NGK+ G+ LYVGRAQKK ER +EL++ +E ++E+ N+YQGVNLY+KNLD
Sbjct: 292 SASKAVDDLNGKDFHGQDLYVGRAQKKHEREEELRKSYEAARLEKANKYQGVNLYIKNLD 351
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
D +DD++LR+ F+ FG ITSAK
Sbjct: 352 DDVDDDKLRQMFSEFGPITSAK 373
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 51/140 (36%), Positives = 87/140 (62%), Gaps = 10/140 (7%)
Query: 107 KSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANK 166
K+ NV++KN+ + + F FG + S +A+D++G S+G+GFV+F T E+A+K
Sbjct: 236 KANFTNVYVKNIAPDVTEDDFRELFEKFGDVTSSSLARDQEGKSRGFGFVNFTTHESASK 295
Query: 167 SIEKVNGMLLNSKIVFVGKFIPRKEREKELG--------EKAKLF--TNVYIKNFGEDFN 216
+++ +NG + + ++VG+ + ERE+EL EKA + N+YIKN +D +
Sbjct: 296 AVDDLNGKDFHGQDLYVGRAQKKHEREEELRKSYEAARLEKANKYQGVNLYIKNLDDDVD 355
Query: 217 DEKLKEMFEPYGTITSYRVM 236
D+KL++MF +G ITS +VM
Sbjct: 356 DDKLRQMFSEFGPITSAKVM 375
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 61/135 (45%), Gaps = 18/135 (13%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQ 261
++Y+ + L E+F G + S RV + +S G+ +V Y + EKA++
Sbjct: 59 ASLYVGELDPSVTEAMLFELFSQIGAVASIRVCRDAVTRRSLGYAYVNYNATADGEKALE 118
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDER 321
N + G+ + +Q R L++ QG N+++KNLD +ID++
Sbjct: 119 ELNYTLIKGRPCRIMWSQ----RDPALRK-----------NGQG-NVFIKNLDVAIDNKA 162
Query: 322 LRKEFTPFGTITSAK 336
L F FG I S K
Sbjct: 163 LHDTFAAFGNILSCK 177
>gi|384251873|gb|EIE25350.1| polyadenylate binding protein [Coccomyxa subellipsoidea C-169]
Length = 681
Score = 320 bits (819), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 152/246 (61%), Positives = 194/246 (78%), Gaps = 4/246 (1%)
Query: 92 RPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSK 151
+P+RIMWS RDP+ RKSGVGN+FIKNLDK IDNKA++DTF+AFG+ILSCKVA D GNSK
Sbjct: 104 KPMRIMWSHRDPAFRKSGVGNIFIKNLDKDIDNKALHDTFTAFGTILSCKVATDLAGNSK 163
Query: 152 GYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNF 211
GYGFVH+E EEAA +IEKVNGMLL K VFVG F+ R ER +K + +TNV++KN
Sbjct: 164 GYGFVHYEKEEAAQLAIEKVNGMLLEGKKVFVGPFLKRTERPV---DKEQHYTNVFVKNL 220
Query: 212 GEDFNDEKLKEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDG 270
E+ DE++++MF +G +TS+ +M ++ GKS+GFGF+ +E E A AV A NGKE+DG
Sbjct: 221 SENLTDEEVEKMFNEHGMVTSFAIMKDEAGKSKGFGFINFEDAEGAHAAVTALNGKEIDG 280
Query: 271 KILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFG 330
K LY GRAQKKAER ELK++F+ ++ ER+ +YQG+NLYVKNL D +DD++LR EF P G
Sbjct: 281 KELYCGRAQKKAEREAELKQKFDEVRQERIAKYQGMNLYVKNLVDEVDDDQLRAEFAPHG 340
Query: 331 TITSAK 336
TITSAK
Sbjct: 341 TITSAK 346
Score = 134 bits (336), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 73/184 (39%), Positives = 115/184 (62%), Gaps = 11/184 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NVF+KNL +++ ++ + F+ G + S + +DE G SKG+GF++FE E A+ ++ +
Sbjct: 214 NVFVKNLSENLTDEEVEKMFNEHGMVTSFAIMKDEAGKSKGFGFINFEDAEGAHAAVTAL 273
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEK---------AKL-FTNVYIKNFGEDFNDEKLK 221
NG ++ K ++ G+ + ERE EL +K AK N+Y+KN ++ +D++L+
Sbjct: 274 NGKEIDGKELYCGRAQKKAEREAELKQKFDEVRQERIAKYQGMNLYVKNLVDEVDDDQLR 333
Query: 222 EMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
F P+GTITS +VM + GKS+GFGFV Y SPE A +AV NGK + GK +YV AQ+
Sbjct: 334 AEFAPHGTITSAKVMKDSAGKSKGFGFVCYSSPEEATRAVTEMNGKMLLGKPMYVALAQR 393
Query: 281 KAER 284
+ R
Sbjct: 394 REVR 397
Score = 42.4 bits (98), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 60/136 (44%), Gaps = 9/136 (6%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQ 261
+++Y+ + D + +L E+F G + S RV + +S G+ +V Y S A+
Sbjct: 24 SSLYVGDLDRDVTEAQLFEIFSQIGPVASIRVCRDAVTRRSLGYAYVNYNS------ALD 77
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGV-NLYVKNLDDSIDDE 320
A + + Y K R + R GV N+++KNLD ID++
Sbjct: 78 AAAAERAIEALNYTSVIPGKEGGEDSKPMRIMWSHRDPAFRKSGVGNIFIKNLDKDIDNK 137
Query: 321 RLRKEFTPFGTITSAK 336
L FT FGTI S K
Sbjct: 138 ALHDTFTAFGTILSCK 153
>gi|149244358|ref|XP_001526722.1| polyadenylate-binding protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|158514320|sp|A5DW14.1|PABP_LODEL RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|146449116|gb|EDK43372.1| polyadenylate-binding protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 661
Score = 319 bits (818), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 150/262 (57%), Positives = 206/262 (78%), Gaps = 1/262 (0%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D E+A++ +N+ ++GRP RIMWSQRDPS R+SG GN+FIKNL +IDNKA++DTFSAFG
Sbjct: 120 DGEKAIEELNYTPVEGRPCRIMWSQRDPSARRSGDGNIFIKNLHPAIDNKALHDTFSAFG 179
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
ILS KVA D+ G SK +GFVH+ETEEAA +IE VNGMLLN + V+VGK + +K+RE +
Sbjct: 180 KILSVKVATDDLGQSKCFGFVHYETEEAAQAAIESVNGMLLNDREVYVGKHVSKKDRESK 239
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITS-YRVMNNDGKSRGFGFVAYESPE 254
L E +TN+Y+KN + +++ +E+F P+G ITS Y + +GKS+GFGFV +E E
Sbjct: 240 LEEMKANYTNIYVKNIDLAYTEKEFEELFAPFGKITSIYLEKDAEGKSKGFGFVNFEEHE 299
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A KAV+ N KE++G+ +YVGRAQKK ERT+ELK+++E +++E+L++YQGVNL+VKNLD
Sbjct: 300 AAAKAVEELNDKEINGQKIYVGRAQKKRERTEELKKQYEAVRLEKLSKYQGVNLFVKNLD 359
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
+ ID E+L +EF PFGTITS+K
Sbjct: 360 EQIDSEKLEEEFKPFGTITSSK 381
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 77/198 (38%), Positives = 126/198 (63%), Gaps = 11/198 (5%)
Query: 107 KSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANK 166
K+ N+++KN+D + K + F+ FG I S + +D +G SKG+GFV+FE EAA K
Sbjct: 244 KANYTNIYVKNIDLAYTEKEFEELFAPFGKITSIYLEKDAEGKSKGFGFVNFEEHEAAAK 303
Query: 167 SIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFN 216
++E++N +N + ++VG+ ++ER +EL ++ + N+++KN E +
Sbjct: 304 AVEELNDKEINGQKIYVGRAQKKRERTEELKKQYEAVRLEKLSKYQGVNLFVKNLDEQID 363
Query: 217 DEKLKEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYV 275
EKL+E F+P+GTITS +VM +D GKS+GFGFV + +PE A KA+ N + V+GK LYV
Sbjct: 364 SEKLEEEFKPFGTITSSKVMVDDAGKSKGFGFVCFSTPEEATKAITEMNQRMVNGKPLYV 423
Query: 276 GRAQKKAERTQELKRRFE 293
AQ+K R +L+++ +
Sbjct: 424 ALAQRKDVRRSQLEQQIQ 441
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 66/148 (44%), Gaps = 21/148 (14%)
Query: 194 KELGEKAKLFTN---VYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFV 248
+E GE + + N +Y+ N+ L E+F P G + S RV + KS G+ +V
Sbjct: 54 EEQGESSGIAENSASLYVGELNPSVNEATLFEIFSPIGQVASIRVCRDAVSKKSLGYAYV 113
Query: 249 AYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNL 308
Y E EKA++ N V+G+ + +Q+ R N+
Sbjct: 114 NYHKLEDGEKAIEELNYTPVEGRPCRIMWSQRDP----------------SARRSGDGNI 157
Query: 309 YVKNLDDSIDDERLRKEFTPFGTITSAK 336
++KNL +ID++ L F+ FG I S K
Sbjct: 158 FIKNLHPAIDNKALHDTFSAFGKILSVK 185
>gi|256075089|ref|XP_002573853.1| polyadenylate binding protein [Schistosoma mansoni]
gi|360044950|emb|CCD82498.1| putative polyadenylate binding protein [Schistosoma mansoni]
Length = 688
Score = 319 bits (817), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 162/283 (57%), Positives = 207/283 (73%), Gaps = 8/283 (2%)
Query: 56 TCHQLGSGAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFI 115
T H LG G V P E+AL+ +N+++L GRPIRIMWSQRDPSLRKSG GN+FI
Sbjct: 50 TRHSLGYG--YVNFEDPK--HAEQALEVLNYESLMGRPIRIMWSQRDPSLRKSGKGNIFI 105
Query: 116 KNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGML 175
KNLDKSI+ K +YDTFS FG ILSCK+ DE G SKGYGFVHFE EE A ++IEK+N M+
Sbjct: 106 KNLDKSIEQKELYDTFSFFGRILSCKIVMDENGQSKGYGFVHFEKEECAERAIEKINNMI 165
Query: 176 LNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRV 235
+ ++V+VGKFIP+ ER K K K F N+YIKNF + ++EKLKEMF +G I S V
Sbjct: 166 IRDRVVYVGKFIPKTER-KSQARKVK-FNNLYIKNFPPETDNEKLKEMFNEFGEIKSACV 223
Query: 236 M-NNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEM 294
M +++GKS+GFGFV + P+ AE AV+ +GKE++G+ LY RAQ+K ER +ELK+R E
Sbjct: 224 MKDSEGKSKGFGFVCFLDPDHAENAVKTMHGKEIEGRALYCARAQRKEERQEELKQRLEK 283
Query: 295 LKIERLNRYQ-GVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ ER + Y VNLYVKNLDD+IDD+RL + F+ G+ITSAK
Sbjct: 284 QRAERQSSYMLNVNLYVKNLDDNIDDKRLEEAFSVHGSITSAK 326
Score = 127 bits (319), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 73/228 (32%), Positives = 130/228 (57%), Gaps = 16/228 (7%)
Query: 77 TERALDTMNFDALKGRPIR----IMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFS 132
ERA++ +N ++ R + I ++R RK N++IKN DN+ + + F+
Sbjct: 154 AERAIEKINNMIIRDRVVYVGKFIPKTERKSQARKVKFNNLYIKNFPPETDNEKLKEMFN 213
Query: 133 AFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKER 192
FG I S V +D +G SKG+GFV F + A +++ ++G + + ++ + ++ER
Sbjct: 214 EFGEIKSACVMKDSEGKSKGFGFVCFLDPDHAENAVKTMHGKEIEGRALYCARAQRKEER 273
Query: 193 EKELGEKAK-----------LFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DG 240
++EL ++ + L N+Y+KN ++ +D++L+E F +G+ITS +VM + +
Sbjct: 274 QEELKQRLEKQRAERQSSYMLNVNLYVKNLDDNIDDKRLEEAFSVHGSITSAKVMKDANN 333
Query: 241 KSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
+S+GFGFV + +PE A +AV NG + K LYV AQ+K +R +L
Sbjct: 334 RSKGFGFVCFANPEQAARAVTDMNGTIIGSKPLYVALAQRKEDRRAKL 381
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 56/88 (63%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
N+++KNLD +ID+K + + FS GSI S KV +D SKG+GFV F E A +++ +
Sbjct: 297 NLYVKNLDDNIDDKRLEEAFSVHGSITSAKVMKDANNRSKGFGFVCFANPEQAARAVTDM 356
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEK 199
NG ++ SK ++V +++R +L E+
Sbjct: 357 NGTIIGSKPLYVALAQRKEDRRAKLIEE 384
>gi|256075085|ref|XP_002573851.1| polyadenylate binding protein [Schistosoma mansoni]
gi|360044948|emb|CCD82496.1| putative polyadenylate binding protein [Schistosoma mansoni]
Length = 726
Score = 319 bits (817), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 162/283 (57%), Positives = 207/283 (73%), Gaps = 8/283 (2%)
Query: 56 TCHQLGSGAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFI 115
T H LG G V P E+AL+ +N+++L GRPIRIMWSQRDPSLRKSG GN+FI
Sbjct: 50 TRHSLGYG--YVNFEDPK--HAEQALEVLNYESLMGRPIRIMWSQRDPSLRKSGKGNIFI 105
Query: 116 KNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGML 175
KNLDKSI+ K +YDTFS FG ILSCK+ DE G SKGYGFVHFE EE A ++IEK+N M+
Sbjct: 106 KNLDKSIEQKELYDTFSFFGRILSCKIVMDENGQSKGYGFVHFEKEECAERAIEKINNMI 165
Query: 176 LNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRV 235
+ ++V+VGKFIP+ ER K K K F N+YIKNF + ++EKLKEMF +G I S V
Sbjct: 166 IRDRVVYVGKFIPKTER-KSQARKVK-FNNLYIKNFPPETDNEKLKEMFNEFGEIKSACV 223
Query: 236 M-NNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEM 294
M +++GKS+GFGFV + P+ AE AV+ +GKE++G+ LY RAQ+K ER +ELK+R E
Sbjct: 224 MKDSEGKSKGFGFVCFLDPDHAENAVKTMHGKEIEGRALYCARAQRKEERQEELKQRLEK 283
Query: 295 LKIERLNRYQ-GVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ ER + Y VNLYVKNLDD+IDD+RL + F+ G+ITSAK
Sbjct: 284 QRAERQSSYMLNVNLYVKNLDDNIDDKRLEEAFSVHGSITSAK 326
Score = 127 bits (319), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 73/228 (32%), Positives = 130/228 (57%), Gaps = 16/228 (7%)
Query: 77 TERALDTMNFDALKGRPIR----IMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFS 132
ERA++ +N ++ R + I ++R RK N++IKN DN+ + + F+
Sbjct: 154 AERAIEKINNMIIRDRVVYVGKFIPKTERKSQARKVKFNNLYIKNFPPETDNEKLKEMFN 213
Query: 133 AFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKER 192
FG I S V +D +G SKG+GFV F + A +++ ++G + + ++ + ++ER
Sbjct: 214 EFGEIKSACVMKDSEGKSKGFGFVCFLDPDHAENAVKTMHGKEIEGRALYCARAQRKEER 273
Query: 193 EKELGEKAK-----------LFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DG 240
++EL ++ + L N+Y+KN ++ +D++L+E F +G+ITS +VM + +
Sbjct: 274 QEELKQRLEKQRAERQSSYMLNVNLYVKNLDDNIDDKRLEEAFSVHGSITSAKVMKDANN 333
Query: 241 KSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
+S+GFGFV + +PE A +AV NG + K LYV AQ+K +R +L
Sbjct: 334 RSKGFGFVCFANPEQAARAVTDMNGTIIGSKPLYVALAQRKEDRRAKL 381
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 56/88 (63%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
N+++KNLD +ID+K + + FS GSI S KV +D SKG+GFV F E A +++ +
Sbjct: 297 NLYVKNLDDNIDDKRLEEAFSVHGSITSAKVMKDANNRSKGFGFVCFANPEQAARAVTDM 356
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEK 199
NG ++ SK ++V +++R +L E+
Sbjct: 357 NGTIIGSKPLYVALAQRKEDRRAKLIEE 384
>gi|256075087|ref|XP_002573852.1| polyadenylate binding protein [Schistosoma mansoni]
gi|360044949|emb|CCD82497.1| putative polyadenylate binding protein [Schistosoma mansoni]
Length = 724
Score = 319 bits (817), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 162/283 (57%), Positives = 207/283 (73%), Gaps = 8/283 (2%)
Query: 56 TCHQLGSGAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFI 115
T H LG G V P E+AL+ +N+++L GRPIRIMWSQRDPSLRKSG GN+FI
Sbjct: 50 TRHSLGYG--YVNFEDPK--HAEQALEVLNYESLMGRPIRIMWSQRDPSLRKSGKGNIFI 105
Query: 116 KNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGML 175
KNLDKSI+ K +YDTFS FG ILSCK+ DE G SKGYGFVHFE EE A ++IEK+N M+
Sbjct: 106 KNLDKSIEQKELYDTFSFFGRILSCKIVMDENGQSKGYGFVHFEKEECAERAIEKINNMI 165
Query: 176 LNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRV 235
+ ++V+VGKFIP+ ER K K K F N+YIKNF + ++EKLKEMF +G I S V
Sbjct: 166 IRDRVVYVGKFIPKTER-KSQARKVK-FNNLYIKNFPPETDNEKLKEMFNEFGEIKSACV 223
Query: 236 M-NNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEM 294
M +++GKS+GFGFV + P+ AE AV+ +GKE++G+ LY RAQ+K ER +ELK+R E
Sbjct: 224 MKDSEGKSKGFGFVCFLDPDHAENAVKTMHGKEIEGRALYCARAQRKEERQEELKQRLEK 283
Query: 295 LKIERLNRYQ-GVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ ER + Y VNLYVKNLDD+IDD+RL + F+ G+ITSAK
Sbjct: 284 QRAERQSSYMLNVNLYVKNLDDNIDDKRLEEAFSVHGSITSAK 326
Score = 127 bits (319), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 73/228 (32%), Positives = 130/228 (57%), Gaps = 16/228 (7%)
Query: 77 TERALDTMNFDALKGRPIR----IMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFS 132
ERA++ +N ++ R + I ++R RK N++IKN DN+ + + F+
Sbjct: 154 AERAIEKINNMIIRDRVVYVGKFIPKTERKSQARKVKFNNLYIKNFPPETDNEKLKEMFN 213
Query: 133 AFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKER 192
FG I S V +D +G SKG+GFV F + A +++ ++G + + ++ + ++ER
Sbjct: 214 EFGEIKSACVMKDSEGKSKGFGFVCFLDPDHAENAVKTMHGKEIEGRALYCARAQRKEER 273
Query: 193 EKELGEKAK-----------LFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DG 240
++EL ++ + L N+Y+KN ++ +D++L+E F +G+ITS +VM + +
Sbjct: 274 QEELKQRLEKQRAERQSSYMLNVNLYVKNLDDNIDDKRLEEAFSVHGSITSAKVMKDANN 333
Query: 241 KSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
+S+GFGFV + +PE A +AV NG + K LYV AQ+K +R +L
Sbjct: 334 RSKGFGFVCFANPEQAARAVTDMNGTIIGSKPLYVALAQRKEDRRAKL 381
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 56/88 (63%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
N+++KNLD +ID+K + + FS GSI S KV +D SKG+GFV F E A +++ +
Sbjct: 297 NLYVKNLDDNIDDKRLEEAFSVHGSITSAKVMKDANNRSKGFGFVCFANPEQAARAVTDM 356
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEK 199
NG ++ SK ++V +++R +L E+
Sbjct: 357 NGTIIGSKPLYVALAQRKEDRRAKLIEE 384
>gi|154275140|ref|XP_001538421.1| polyadenylate-binding protein [Ajellomyces capsulatus NAm1]
gi|150414861|gb|EDN10223.1| polyadenylate-binding protein [Ajellomyces capsulatus NAm1]
Length = 732
Score = 318 bits (816), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 156/263 (59%), Positives = 198/263 (75%), Gaps = 2/263 (0%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D ERAL+ +N+ +KG+P RIMWSQRDP+LRK+G GNVFIKNLD +IDNKA++DTF+AFG
Sbjct: 108 DGERALEDLNYTLIKGKPCRIMWSQRDPALRKTGQGNVFIKNLDTAIDNKALHDTFAAFG 167
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCKVAQDE GNSKGYGFVH+ET EAA +I+ VNGMLLN K VFVG I +K+R+ +
Sbjct: 168 NILSCKVAQDEFGNSKGYGFVHYETAEAATNAIKHVNGMLLNEKKVFVGHHIAKKDRQSK 227
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESP 253
E FTNVY+KN + ++E+ +E+FE YG ITS + + GKSRGFGF +
Sbjct: 228 FEEMKANFTNVYVKNLDTEVSNEEFRELFEKYGEITSASISRDGETGKSRGFGFFYFLKH 287
Query: 254 EFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNL 313
E A AV+ N KE G+ LYVGRAQKK ER +EL+++ E ++E+ ++YQGVNLYVKNL
Sbjct: 288 ESAAAAVEELNDKEYKGQKLYVGRAQKKHEREEELRKQHEAARVEKASKYQGVNLYVKNL 347
Query: 314 DDSIDDERLRKEFTPFGTITSAK 336
D IDDE+LR F FG ITSA+
Sbjct: 348 TDDIDDEKLRDLFISFGNITSAR 370
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 115/247 (46%), Gaps = 64/247 (25%)
Query: 107 KSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQD-EQGNSKGYGFVHFETEEAAN 165
K+ NV++KNLD + N+ + F +G I S +++D E G S+G+GF +F E+A
Sbjct: 232 KANFTNVYVKNLDTEVSNEEFRELFEKYGEITSASISRDGETGKSRGFGFFYFLKHESAA 291
Query: 166 KSIEKVNGMLLNSKIVFVGKFIPRKEREKELG--------EKAKLF--TNVYIKNFGEDF 215
++E++N + ++VG+ + ERE+EL EKA + N+Y+KN +D
Sbjct: 292 AAVEELNDKEYKGQKLYVGRAQKKHEREEELRKQHEAARVEKASKYQGVNLYVKNLTDDI 351
Query: 216 NDEKLKEMFEPYGTITSYRVMNNDGKSRG------------------------------- 244
+DEKL+++F +G ITS RVM + G
Sbjct: 352 DDEKLRDLFISFGNITSARVMRDTAGDPGSESEKEKESANKENVKDEAKKESGEEDSADK 411
Query: 245 ----------------------FGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKA 282
FGFV + +P+ A KAV N + V+GK LYV AQ+K
Sbjct: 412 SDKVEKSDSKNATEKKLGKSKGFGFVCFSNPDEASKAVTEMNQRMVNGKPLYVALAQRKD 471
Query: 283 ERTQELK 289
R +L+
Sbjct: 472 VRKSQLE 478
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 61/135 (45%), Gaps = 18/135 (13%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQ 261
++Y+ + L E+F G + S RV + +S G+ +V Y + E+A++
Sbjct: 55 ASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALE 114
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDER 321
N + GK + +Q R L++ QG N+++KNLD +ID++
Sbjct: 115 DLNYTLIKGKPCRIMWSQ----RDPALRKTG-----------QG-NVFIKNLDTAIDNKA 158
Query: 322 LRKEFTPFGTITSAK 336
L F FG I S K
Sbjct: 159 LHDTFAAFGNILSCK 173
>gi|392927774|ref|NP_510259.2| Protein PAB-2, isoform b [Caenorhabditis elegans]
gi|371570799|emb|CAA90446.2| Protein PAB-2, isoform b [Caenorhabditis elegans]
Length = 575
Score = 318 bits (816), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 155/256 (60%), Positives = 198/256 (77%), Gaps = 3/256 (1%)
Query: 84 MNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVA 143
MNF+ + GRP+RIMWSQRDP+ R++G GN+FIKNLD+ IDNK++YDTFS FG+ILSCKVA
Sbjct: 1 MNFEVIHGRPMRIMWSQRDPAARRAGNGNIFIKNLDRVIDNKSVYDTFSLFGNILSCKVA 60
Query: 144 QDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLF 203
D++GNSKGYGFVHFETE +A +IEKVNGMLL+ K V+VGKF PR +R KELGE +
Sbjct: 61 TDDEGNSKGYGFVHFETEHSAQTAIEKVNGMLLSDKKVYVGKFQPRAQRMKELGESGLKY 120
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGKSRGFGFVAYESPEFAEKAVQA 262
TNV++KNFGE + EKL MF +G ITS VM + GK +GFGFVA+ + A +AV+
Sbjct: 121 TNVFVKNFGEHLDQEKLSAMFSKFGEITSAVVMTDAQGKPKGFGFVAFADQDAAGQAVEK 180
Query: 263 WNGKEVDGK--ILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDE 320
N ++G L V RAQKK+ER+ ELKR++E LK ER+ RYQGVNLYVKN+++ ++D+
Sbjct: 181 LNDSILEGTDCKLSVCRAQKKSERSAELKRKYEALKQERVQRYQGVNLYVKNIEEDLNDD 240
Query: 321 RLRKEFTPFGTITSAK 336
LR F+ FGTITSAK
Sbjct: 241 GLRDHFSSFGTITSAK 256
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 80/209 (38%), Positives = 118/209 (56%), Gaps = 15/209 (7%)
Query: 99 SQRDPSLRKSGV--GNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFV 156
+QR L +SG+ NVF+KN + +D + + FS FG I S V D QG KG+GFV
Sbjct: 107 AQRMKELGESGLKYTNVFVKNFGEHLDQEKLSAMFSKFGEITSAVVMTDAQGKPKGFGFV 166
Query: 157 HFETEEAANKSIEKVNGMLLNSK--IVFVGKFIPRKEREKELGEKAKLF----------T 204
F ++AA +++EK+N +L + V + + ER EL K +
Sbjct: 167 AFADQDAAGQAVEKLNDSILEGTDCKLSVCRAQKKSERSAELKRKYEALKQERVQRYQGV 226
Query: 205 NVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPEFAEKAVQAW 263
N+Y+KN ED ND+ L++ F +GTITS +VM + +G+S+GFGFV +E PE A AV
Sbjct: 227 NLYVKNIEEDLNDDGLRDHFSSFGTITSAKVMVDENGRSKGFGFVCFEKPEEATAAVTDM 286
Query: 264 NGKEVDGKILYVGRAQKKAERTQELKRRF 292
N K + K LYV AQ+K +R +L ++
Sbjct: 287 NSKMIGAKPLYVALAQRKEDRRAQLASQY 315
>gi|302920668|ref|XP_003053121.1| hypothetical protein NECHADRAFT_59146 [Nectria haematococca mpVI
77-13-4]
gi|256734061|gb|EEU47408.1| hypothetical protein NECHADRAFT_59146 [Nectria haematococca mpVI
77-13-4]
Length = 742
Score = 318 bits (815), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 155/262 (59%), Positives = 206/262 (78%), Gaps = 1/262 (0%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D E+AL+ +N+ +KGRP RIMWSQRDP+LRK+G GNVFIKNLD +IDNKA++DTF+AFG
Sbjct: 113 DGEKALEELNYTIIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDVAIDNKALHDTFAAFG 172
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCKVAQDE GNSKGYGFVH+ET+EAA ++I+ VNGMLLN K V+VG IP+K+R+ +
Sbjct: 173 NILSCKVAQDENGNSKGYGFVHYETDEAAAQAIKHVNGMLLNEKKVYVGHHIPKKDRQSK 232
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPE 254
E FTNVY+KN + ++ +++FE YG +TS + + +GKSRGFGFV + + E
Sbjct: 233 FEEMKANFTNVYVKNISPEATEDDFRQLFEQYGDVTSSSLARDQEGKSRGFGFVNFTTHE 292
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A KAV NGK+ G+ LYVGRAQKK ER +EL++ +E ++E+ N+YQGVNLY+KNLD
Sbjct: 293 SAAKAVDELNGKDFRGQDLYVGRAQKKHEREEELRKSYEAARLEKANKYQGVNLYIKNLD 352
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
D +DD++LR+ F+ FG ITSAK
Sbjct: 353 DDVDDDKLRQMFSEFGPITSAK 374
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/241 (30%), Positives = 117/241 (48%), Gaps = 58/241 (24%)
Query: 107 KSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANK 166
K+ NV++KN+ F +G + S +A+D++G S+G+GFV+F T E+A K
Sbjct: 237 KANFTNVYVKNISPEATEDDFRQLFEQYGDVTSSSLARDQEGKSRGFGFVNFTTHESAAK 296
Query: 167 SIEKVNGMLLNSKIVFVGKFIPRKEREKELG--------EKAKLF--TNVYIKNFGEDFN 216
+++++NG + ++VG+ + ERE+EL EKA + N+YIKN +D +
Sbjct: 297 AVDELNGKDFRGQDLYVGRAQKKHEREEELRKSYEAARLEKANKYQGVNLYIKNLDDDVD 356
Query: 217 DEKLKEMFEPYGTITSYRVMNND------------------------------------- 239
D+KL++MF +G ITS +VM +
Sbjct: 357 DDKLRQMFSEFGPITSAKVMRDTPVENEDEKPAEEKKEEQEDKDKENKPEETKEGEEGAE 416
Query: 240 -----------GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
GKS+GFGFV + +P+ A KAV N + V K LYV AQ+K R +L
Sbjct: 417 KKAEKKSDKKLGKSKGFGFVCFSNPDDATKAVAEMNQRMVSNKPLYVALAQRKDVRKSQL 476
Query: 289 K 289
+
Sbjct: 477 E 477
Score = 43.9 bits (102), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 61/135 (45%), Gaps = 18/135 (13%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQ 261
++Y+ + L E+F G + S RV + +S G+ +V Y S EKA++
Sbjct: 60 ASLYVGELDPAVTEAMLFELFSQIGAVASIRVCRDAVTRRSLGYAYVNYNSTADGEKALE 119
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDER 321
N + G+ + +Q R L++ QG N+++KNLD +ID++
Sbjct: 120 ELNYTIIKGRPCRIMWSQ----RDPALRKTG-----------QG-NVFIKNLDVAIDNKA 163
Query: 322 LRKEFTPFGTITSAK 336
L F FG I S K
Sbjct: 164 LHDTFAAFGNILSCK 178
>gi|357475273|ref|XP_003607922.1| Poly(A)-binding protein [Medicago truncatula]
gi|355508977|gb|AES90119.1| Poly(A)-binding protein [Medicago truncatula]
Length = 654
Score = 318 bits (814), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 160/262 (61%), Positives = 203/262 (77%), Gaps = 3/262 (1%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D RALD +NF L RPIRIM+S RDPS+RKSG GN+FIKNLDK+ID+KA++DTFS+FG
Sbjct: 87 DAARALDVLNFTPLNNRPIRIMYSHRDPSIRKSGQGNIFIKNLDKAIDHKALHDTFSSFG 146
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCKVA D G SKGYGFV F+TEEAA K+IEK+NGMLLN K V+VG F+ ++ERE
Sbjct: 147 NILSCKVAVDGSGQSKGYGFVQFDTEEAAQKAIEKLNGMLLNDKQVYVGPFLRKQERE-S 205
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPE 254
G++AK F NV++KN E D++LK+ F +GTITS VM + DGKS+ FGFV +ES +
Sbjct: 206 TGDRAK-FNNVFVKNLSESTTDDELKKTFGEFGTITSAVVMRDGDGKSKCFGFVNFESTD 264
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A +AV+A NGK++D K YVG+AQKK+ER ELK +FE E ++YQG NLYVKNLD
Sbjct: 265 DAARAVEALNGKKIDDKEWYVGKAQKKSEREHELKIKFEQSMKEAADKYQGANLYVKNLD 324
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
DSI DE+L++ F+ +GTITS K
Sbjct: 325 DSIADEKLKELFSSYGTITSCK 346
Score = 144 bits (362), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 83/196 (42%), Positives = 119/196 (60%), Gaps = 11/196 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NVF+KNL +S + + TF FG+I S V +D G SK +GFV+FE+ + A +++E +
Sbjct: 214 NVFVKNLSESTTDDELKKTFGEFGTITSAVVMRDGDGKSKCFGFVNFESTDDAARAVEAL 273
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELG--------EKAKLF--TNVYIKNFGEDFNDEKLK 221
NG ++ K +VGK + ERE EL E A + N+Y+KN + DEKLK
Sbjct: 274 NGKKIDDKEWYVGKAQKKSEREHELKIKFEQSMKEAADKYQGANLYVKNLDDSIADEKLK 333
Query: 222 EMFEPYGTITSYRVMNN-DGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
E+F YGTITS +VM + +G SRG GFVA+ +PE A +A+ NGK V K LYV AQ+
Sbjct: 334 ELFSSYGTITSCKVMRDPNGVSRGSGFVAFSTPEEASRALLEMNGKMVASKPLYVTLAQR 393
Query: 281 KAERTQELKRRFEMLK 296
K +R L+ +F ++
Sbjct: 394 KEDRRARLQAQFAQMR 409
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 128/226 (56%), Gaps = 20/226 (8%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQD-EQGNSKGYGFVHFETEEAANKSIEK 170
++++ +LD ++ + +YD F+ G ++S +V +D S GYG+V++ + A ++++
Sbjct: 35 SLYVGDLDMNVTDSQLYDLFNQLGQVVSVRVCRDLTTRRSLGYGYVNYSNPQDAARALDV 94
Query: 171 VNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTI 230
+N LN++ + + + R ++ G+ N++IKN + + + L + F +G I
Sbjct: 95 LNFTPLNNRPIRI-MYSHRDPSIRKSGQ-----GNIFIKNLDKAIDHKALHDTFSSFGNI 148
Query: 231 TSYRV-MNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELK 289
S +V ++ G+S+G+GFV +++ E A+KA++ NG ++ K +YVG +K ER
Sbjct: 149 LSCKVAVDGSGQSKGYGFVQFDTEEAAQKAIEKLNGMLLNDKQVYVGPFLRKQERESTGD 208
Query: 290 RRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSA 335
R + N N++VKNL +S D+ L+K F FGTITSA
Sbjct: 209 R-------AKFN-----NVFVKNLSESTTDDELKKTFGEFGTITSA 242
>gi|356521524|ref|XP_003529405.1| PREDICTED: polyadenylate-binding protein 2-like [Glycine max]
Length = 651
Score = 317 bits (813), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 159/262 (60%), Positives = 199/262 (75%), Gaps = 3/262 (1%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D RALD +NF L RPIRIM+S RDPS+RKSG GN+FIKNLD++ID+KA++DTFS FG
Sbjct: 84 DAARALDVLNFTPLNNRPIRIMYSHRDPSIRKSGQGNIFIKNLDRAIDHKALHDTFSTFG 143
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCKVA D G SKGYGFV F+ EE+A K+IEK+NGMLLN K V+VG F+ ++ERE
Sbjct: 144 NILSCKVATDSSGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVGPFLRKQERESA 203
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPE 254
+KAK F NV++KN E D++LK F +GTITS VM + DGKS+ FGFV +E+ +
Sbjct: 204 -ADKAK-FNNVFVKNLSESTTDDELKNTFGEFGTITSAVVMRDGDGKSKCFGFVNFENAD 261
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A +AV+A NGK D K YVG+AQKK+ER ELK+RFE E ++YQG NLYVKNLD
Sbjct: 262 DAARAVEALNGKNFDDKEWYVGKAQKKSERENELKQRFEQSMKEAADKYQGANLYVKNLD 321
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
DSI DE+L++ F+PFGTITS K
Sbjct: 322 DSIGDEKLKELFSPFGTITSCK 343
Score = 147 bits (370), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 85/208 (40%), Positives = 125/208 (60%), Gaps = 11/208 (5%)
Query: 100 QRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFE 159
+R+ + K+ NVF+KNL +S + + +TF FG+I S V +D G SK +GFV+FE
Sbjct: 199 ERESAADKAKFNNVFVKNLSESTTDDELKNTFGEFGTITSAVVMRDGDGKSKCFGFVNFE 258
Query: 160 TEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELG--------EKAKLF--TNVYIK 209
+ A +++E +NG + K +VGK + ERE EL E A + N+Y+K
Sbjct: 259 NADDAARAVEALNGKNFDDKEWYVGKAQKKSERENELKQRFEQSMKEAADKYQGANLYVK 318
Query: 210 NFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGKSRGFGFVAYESPEFAEKAVQAWNGKEV 268
N + DEKLKE+F P+GTITS +VM + +G SRG GFVA+ +PE A +A+ NGK V
Sbjct: 319 NLDDSIGDEKLKELFSPFGTITSCKVMRDPNGLSRGSGFVAFSTPEEASRALLEMNGKMV 378
Query: 269 DGKILYVGRAQKKAERTQELKRRFEMLK 296
K LYV AQ+K +R L+ +F ++
Sbjct: 379 VSKPLYVTLAQRKEDRRARLQAQFAQMR 406
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 126/227 (55%), Gaps = 22/227 (9%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQD-EQGNSKGYGFVHFETEEAANKSIEK 170
++++ +LD ++ + +YD F+ G ++S +V +D S GYG+V+F + A ++++
Sbjct: 32 SLYVGDLDPNVTDAQLYDLFNQLGQVVSVRVCRDLTSRRSLGYGYVNFSNPQDAARALDV 91
Query: 171 VNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTI 230
+N LN++ + + + R ++ G+ N++IKN + + L + F +G I
Sbjct: 92 LNFTPLNNRPIRI-MYSHRDPSIRKSGQ-----GNIFIKNLDRAIDHKALHDTFSTFGNI 145
Query: 231 TSYRV-MNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL- 288
S +V ++ G+S+G+GFV +++ E A+KA++ NG ++ K +YVG +K ER
Sbjct: 146 LSCKVATDSSGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVGPFLRKQERESAAD 205
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSA 335
K +F N++VKNL +S D+ L+ F FGTITSA
Sbjct: 206 KAKFN-------------NVFVKNLSESTTDDELKNTFGEFGTITSA 239
>gi|400597582|gb|EJP65312.1| polyadenylate-binding protein [Beauveria bassiana ARSEF 2860]
Length = 736
Score = 317 bits (813), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 155/262 (59%), Positives = 205/262 (78%), Gaps = 1/262 (0%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D E+AL+ +N+ +KGRP RIMWSQRDP+LRK+G GNVFIKNLD +IDNKA++DTF+AFG
Sbjct: 108 DGEKALEELNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDVAIDNKALHDTFAAFG 167
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCKVAQDE G+SKGYGFVH+ET+EAA ++I+ VNGMLLN K V+VG IP+K+R+ +
Sbjct: 168 NILSCKVAQDENGSSKGYGFVHYETDEAAQQAIKHVNGMLLNEKKVYVGHHIPKKDRQSK 227
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPE 254
E FTNVY+KN + D++ +E+FE +G +TS + DGKSRGFGFV + + E
Sbjct: 228 FEEMKANFTNVYVKNISPEVTDDEFRELFERHGDVTSSSIAREQDGKSRGFGFVNFTTHE 287
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A KAV+ N K++ G+ LYVGRAQKK ER +EL++ +E +IE+ ++YQGVNLY+KNLD
Sbjct: 288 AAAKAVEELNNKDLHGQELYVGRAQKKHEREEELRKSYEAARIEKASKYQGVNLYIKNLD 347
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
D +DD++LR F FG ITSAK
Sbjct: 348 DDVDDDKLRIMFAEFGPITSAK 369
Score = 45.8 bits (107), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 61/135 (45%), Gaps = 18/135 (13%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQ 261
++Y+ + L E+F G + S RV + +S G+ +V Y S EKA++
Sbjct: 55 ASLYVGELDPSVTEAMLFELFSQIGAVASIRVCRDAVTRRSLGYAYVNYNSTPDGEKALE 114
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDER 321
N + G+ + +Q R L++ QG N+++KNLD +ID++
Sbjct: 115 ELNYTLIKGRPCRIMWSQ----RDPALRKTG-----------QG-NVFIKNLDVAIDNKA 158
Query: 322 LRKEFTPFGTITSAK 336
L F FG I S K
Sbjct: 159 LHDTFAAFGNILSCK 173
Score = 42.0 bits (97), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 29/45 (64%)
Query: 245 FGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELK 289
FGFV + +P+ A KAV N + ++GK LYV AQ+K R +L+
Sbjct: 429 FGFVCFSNPDDATKAVAEMNQRMINGKPLYVALAQRKDVRKSQLE 473
>gi|168018573|ref|XP_001761820.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162686875|gb|EDQ73261.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 439
Score = 317 bits (811), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 156/262 (59%), Positives = 200/262 (76%), Gaps = 3/262 (1%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D RAL+ +NF + G+PIRIM+S RDPS+RKSG N+FIKNLDKSIDNKA++DTF+AFG
Sbjct: 77 DATRALELLNFTGVNGKPIRIMFSHRDPSIRKSGTANIFIKNLDKSIDNKALHDTFAAFG 136
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCKVA D G SKGYGFV FE EE+A +IEKVNGMLLN K VFVG F+ R+ER++
Sbjct: 137 NILSCKVATDASGQSKGYGFVQFEQEESAQNAIEKVNGMLLNDKQVFVGPFVRRQERDQA 196
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPE 254
G F NVY+KN + D++LK++F +G I+S VM +NDGKS+ FGFV +E P+
Sbjct: 197 GG--VSKFNNVYVKNLADVTTDDELKKVFGAWGPISSAVVMRDNDGKSKCFGFVNFEHPD 254
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A KAV+A GK+ D K YVGRAQKK+ER EL+ +FE + ER+ +YQGVNLY+KNLD
Sbjct: 255 DAAKAVEALQGKKFDEKEWYVGRAQKKSEREAELRAKFEQERKERIEKYQGVNLYLKNLD 314
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
D++DDE++R+ F +GTITS K
Sbjct: 315 DTVDDEKIRELFAEYGTITSCK 336
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/210 (38%), Positives = 119/210 (56%), Gaps = 15/210 (7%)
Query: 100 QRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFE 159
+RD + S NV++KNL + + F A+G I S V +D G SK +GFV+FE
Sbjct: 192 ERDQAGGVSKFNNVYVKNLADVTTDDELKKVFGAWGPISSAVVMRDNDGKSKCFGFVNFE 251
Query: 160 TEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKL------------FTNVY 207
+ A K++E + G + K +VG+ + ERE EL +AK N+Y
Sbjct: 252 HPDDAAKAVEALQGKKFDEKEWYVGRAQKKSEREAEL--RAKFEQERKERIEKYQGVNLY 309
Query: 208 IKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPEFAEKAVQAWNGK 266
+KN + +DEK++E+F YGTITS +VM ++ G+S+G GFVA+ SP+ A +AV NGK
Sbjct: 310 LKNLDDTVDDEKIRELFAEYGTITSCKVMRDHQGQSKGSGFVAFSSPDEATRAVTEMNGK 369
Query: 267 EVDGKILYVGRAQKKAERTQELKRRFEMLK 296
V K LYV AQ+K ER L+ F ++
Sbjct: 370 MVGNKPLYVALAQRKEERRMRLQAAFAQMR 399
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 121/226 (53%), Gaps = 20/226 (8%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSIEK 170
++++ +L+ ++ +Y+ FS G ++S +V +D S GY +V++ + A +++E
Sbjct: 25 SLYVGDLEPNVSEAQLYEMFSQVGQVVSIRVCRDLITRRSLGYSYVNYNNAQDATRALEL 84
Query: 171 VNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTI 230
+N +N K + + F R ++ G N++IKN + +++ L + F +G I
Sbjct: 85 LNFTGVNGKPIRI-MFSHRDPSIRKSGT-----ANIFIKNLDKSIDNKALHDTFAAFGNI 138
Query: 231 TSYRVMNN-DGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELK 289
S +V + G+S+G+GFV +E E A+ A++ NG ++ K ++VG ++ ER Q
Sbjct: 139 LSCKVATDASGQSKGYGFVQFEQEESAQNAIEKVNGMLLNDKQVFVGPFVRRQERDQ--- 195
Query: 290 RRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSA 335
+ + N N+YVKNL D D+ L+K F +G I+SA
Sbjct: 196 ----AGGVSKFN-----NVYVKNLADVTTDDELKKVFGAWGPISSA 232
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 65/135 (48%), Gaps = 18/135 (13%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQ 261
T++Y+ + + ++ +L EMF G + S RV + +S G+ +V Y + + A +A++
Sbjct: 24 TSLYVGDLEPNVSEAQLYEMFSQVGQVVSIRVCRDLITRRSLGYSYVNYNNAQDATRALE 83
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDER 321
N V+GK + + + + + + N+++KNLD SID++
Sbjct: 84 LLNFTGVNGKPIRIMFSHRDPS----------------IRKSGTANIFIKNLDKSIDNKA 127
Query: 322 LRKEFTPFGTITSAK 336
L F FG I S K
Sbjct: 128 LHDTFAAFGNILSCK 142
>gi|356499763|ref|XP_003518706.1| PREDICTED: polyadenylate-binding protein 2-like [Glycine max]
Length = 646
Score = 316 bits (810), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 157/262 (59%), Positives = 201/262 (76%), Gaps = 3/262 (1%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D RALD +NF L RPIRIM+S RDPS+RKSG GN+FIKNLD++ID+KA++DTFS FG
Sbjct: 81 DAARALDVLNFTPLNNRPIRIMYSHRDPSIRKSGQGNIFIKNLDRAIDHKALHDTFSTFG 140
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCKVA D G SKGYGFV F+ EE+A K+IEK+NGMLLN K V+VG F+ ++ERE
Sbjct: 141 NILSCKVATDSSGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVGPFLRKQEREST 200
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPE 254
+KAK F NV++KN E D++LK +F +GTITS VM + DGKS+ FGFV +E+ +
Sbjct: 201 -ADKAK-FNNVFVKNLSESTTDDELKNVFGEFGTITSAVVMRDGDGKSKCFGFVNFENAD 258
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A +AV+A NGK+ D K YVG+AQKK+ER ELK+RFE E ++YQG NLYVKNLD
Sbjct: 259 DAARAVEALNGKKFDDKEWYVGKAQKKSERENELKQRFEQSMKEAADKYQGANLYVKNLD 318
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
DS+ D++L++ F+PFGTITS K
Sbjct: 319 DSLGDDKLKELFSPFGTITSCK 340
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 82/208 (39%), Positives = 124/208 (59%), Gaps = 11/208 (5%)
Query: 100 QRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFE 159
+R+ + K+ NVF+KNL +S + + + F FG+I S V +D G SK +GFV+FE
Sbjct: 196 ERESTADKAKFNNVFVKNLSESTTDDELKNVFGEFGTITSAVVMRDGDGKSKCFGFVNFE 255
Query: 160 TEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELG--------EKAKLF--TNVYIK 209
+ A +++E +NG + K +VGK + ERE EL E A + N+Y+K
Sbjct: 256 NADDAARAVEALNGKKFDDKEWYVGKAQKKSERENELKQRFEQSMKEAADKYQGANLYVK 315
Query: 210 NFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGKSRGFGFVAYESPEFAEKAVQAWNGKEV 268
N + D+KLKE+F P+GTITS +VM + +G SRG GFVA+ +P+ A +A+ NGK V
Sbjct: 316 NLDDSLGDDKLKELFSPFGTITSCKVMRDPNGISRGSGFVAFSTPDEASRALLEMNGKMV 375
Query: 269 DGKILYVGRAQKKAERTQELKRRFEMLK 296
K LYV AQ+K +R L+ +F ++
Sbjct: 376 VSKPLYVTLAQRKEDRRARLQAQFAQMR 403
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 126/227 (55%), Gaps = 22/227 (9%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQD-EQGNSKGYGFVHFETEEAANKSIEK 170
++++ +LD ++ + +YD F+ G ++S +V +D S GYG+V+F + A ++++
Sbjct: 29 SLYVGDLDPNVTDAQLYDLFNQLGQVVSVRVCRDLTSRRSLGYGYVNFSNPQDAARALDV 88
Query: 171 VNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTI 230
+N LN++ + + + R ++ G+ N++IKN + + L + F +G I
Sbjct: 89 LNFTPLNNRPIRI-MYSHRDPSIRKSGQ-----GNIFIKNLDRAIDHKALHDTFSTFGNI 142
Query: 231 TSYRV-MNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL- 288
S +V ++ G+S+G+GFV +++ E A+KA++ NG ++ K +YVG +K ER
Sbjct: 143 LSCKVATDSSGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVGPFLRKQERESTAD 202
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSA 335
K +F N++VKNL +S D+ L+ F FGTITSA
Sbjct: 203 KAKFN-------------NVFVKNLSESTTDDELKNVFGEFGTITSA 236
>gi|393216848|gb|EJD02338.1| polyadenylate binding protein [Fomitiporia mediterranea MF3/22]
Length = 701
Score = 316 bits (810), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 145/262 (55%), Positives = 202/262 (77%), Gaps = 1/262 (0%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D ERAL+ +N+ +K R RIMWSQRDP+LRK+G GN+FIKNLD+ ID+KA++DTF+AFG
Sbjct: 109 DGERALEQLNYSLIKNRACRIMWSQRDPALRKTGQGNIFIKNLDEQIDHKALHDTFAAFG 168
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
++LSCKVA DE G S+G+GFVH++T EAA+ +I+ VNGMLLN K VFVG +I +KER+
Sbjct: 169 NVLSCKVATDENGRSRGFGFVHYDTAEAADTAIKAVNGMLLNDKKVFVGHYISKKERQAH 228
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGKSRGFGFVAYESPE 254
+ E+ FTN+Y+KN + D++ +MF +G +TS V + +GKS+GFGFV ++ E
Sbjct: 229 IDEQKSQFTNLYVKNLDTEVTDDEFNDMFAKFGEVTSAVVQKDEEGKSKGFGFVNFKDHE 288
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A+ AV A + E++GK L+V RAQKKAER +EL++ +E K+E+L++YQG NLY+KNL+
Sbjct: 289 SAQAAVDALHDTELNGKKLFVTRAQKKAEREEELRKSYEQAKMEKLSKYQGANLYIKNLE 348
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
D +DD++LR EF PFGTITS K
Sbjct: 349 DDMDDDKLRAEFEPFGTITSCK 370
Score = 150 bits (379), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 82/198 (41%), Positives = 124/198 (62%), Gaps = 11/198 (5%)
Query: 106 RKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAAN 165
+KS N+++KNLD + + D F+ FG + S V +DE+G SKG+GFV+F+ E+A
Sbjct: 232 QKSQFTNLYVKNLDTEVTDDEFNDMFAKFGEVTSAVVQKDEEGKSKGFGFVNFKDHESAQ 291
Query: 166 KSIEKVNGMLLNSKIVFVGKFIPRKEREKELG---EKAKL-------FTNVYIKNFGEDF 215
+++ ++ LN K +FV + + ERE+EL E+AK+ N+YIKN +D
Sbjct: 292 AAVDALHDTELNGKKLFVTRAQKKAEREEELRKSYEQAKMEKLSKYQGANLYIKNLEDDM 351
Query: 216 NDEKLKEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILY 274
+D+KL+ FEP+GTITS ++M ++ G S+GFGFV Y SPE A KAV N K + K LY
Sbjct: 352 DDDKLRAEFEPFGTITSCKIMRDEKGTSKGFGFVCYSSPEEATKAVAEMNNKMLGSKPLY 411
Query: 275 VGRAQKKAERTQELKRRF 292
V AQ++ R Q+L+ +
Sbjct: 412 VSPAQRREVRRQQLESQI 429
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 75/136 (55%), Gaps = 16/136 (11%)
Query: 77 TERALDTMNFDALKGRPIRIMWSQ----RDPSLRKS------------GVGNVFIKNLDK 120
+ A+D ++ L G+ + + +Q R+ LRKS N++IKNL+
Sbjct: 290 AQAAVDALHDTELNGKKLFVTRAQKKAEREEELRKSYEQAKMEKLSKYQGANLYIKNLED 349
Query: 121 SIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKI 180
+D+ + F FG+I SCK+ +DE+G SKG+GFV + + E A K++ ++N +L SK
Sbjct: 350 DMDDDKLRAEFEPFGTITSCKIMRDEKGTSKGFGFVCYSSPEEATKAVAEMNNKMLGSKP 409
Query: 181 VFVGKFIPRKEREKEL 196
++V R+ R ++L
Sbjct: 410 LYVSPAQRREVRRQQL 425
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 59/135 (43%), Gaps = 18/135 (13%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQ 261
++Y+ + L E+F G + S RV + +S G+ +V Y + E+A++
Sbjct: 56 ASLYVGELDSTVTEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNAADGERALE 115
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDER 321
N + + + +Q R L++ QG N+++KNLD+ ID +
Sbjct: 116 QLNYSLIKNRACRIMWSQ----RDPALRKTG-----------QG-NIFIKNLDEQIDHKA 159
Query: 322 LRKEFTPFGTITSAK 336
L F FG + S K
Sbjct: 160 LHDTFAAFGNVLSCK 174
>gi|356576103|ref|XP_003556173.1| PREDICTED: polyadenylate-binding protein 5-like isoform 2 [Glycine
max]
Length = 642
Score = 315 bits (808), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 154/263 (58%), Positives = 197/263 (74%), Gaps = 4/263 (1%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D A++ +NF L G+PIRIM+SQRDPS+RKSG GNVFIKNLD SIDNKA++DTF+AFG
Sbjct: 88 DASNAMELLNFTPLNGKPIRIMFSQRDPSIRKSGHGNVFIKNLDTSIDNKALHDTFAAFG 147
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
++LSCKVA D G SKGYGFV F+ EEAA +I+++NGML+N K V+VG FI R+ERE+
Sbjct: 148 TVLSCKVALDSSGQSKGYGFVQFDNEEAAQNAIKRLNGMLINDKQVYVGLFIRRQEREQT 207
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGKSRGFGFVAYESPE 254
G FTNVY+KN E + DE LK++F PYGTITS VM + +GKSR FGFV +++P+
Sbjct: 208 NGSPK--FTNVYVKNLSETYTDEDLKKLFGPYGTITSATVMKDVNGKSRCFGFVNFQNPD 265
Query: 255 FAEKAVQAWNGKEVDG-KILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNL 313
A AV+ NG ++ ++LYVGRAQ+KAER ELK + E +I R + QG NLY+KNL
Sbjct: 266 SAAAAVERLNGTTINNDRVLYVGRAQRKAEREAELKAKIEQERISRYEKLQGANLYLKNL 325
Query: 314 DDSIDDERLRKEFTPFGTITSAK 336
DDS DE+L+ F+ FGTITS K
Sbjct: 326 DDSFSDEKLKDLFSEFGTITSCK 348
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 75/199 (37%), Positives = 127/199 (63%), Gaps = 16/199 (8%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV++KNL ++ ++ + F +G+I S V +D G S+ +GFV+F+ ++A ++E++
Sbjct: 215 NVYVKNLSETYTDEDLKKLFGPYGTITSATVMKDVNGKSRCFGFVNFQNPDSAAAAVERL 274
Query: 172 NGMLLNS-KIVFVGKFIPRKEREKELGEKAKL------------FTNVYIKNFGEDFNDE 218
NG +N+ ++++VG+ + ERE EL KAK+ N+Y+KN + F+DE
Sbjct: 275 NGTTINNDRVLYVGRAQRKAEREAEL--KAKIEQERISRYEKLQGANLYLKNLDDSFSDE 332
Query: 219 KLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGR 277
KLK++F +GTITS +VM +++G+S+G GFV++ +PE A KA+ NGK + K LYV
Sbjct: 333 KLKDLFSEFGTITSCKVMIDSNGRSKGSGFVSFSTPEEASKALNEMNGKLIGRKPLYVAV 392
Query: 278 AQKKAERTQELKRRFEMLK 296
AQ+K ER L+ +F ++
Sbjct: 393 AQRKEERKAHLQAQFAQIR 411
Score = 114 bits (284), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 129/228 (56%), Gaps = 22/228 (9%)
Query: 111 GNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSIE 169
++++ +L+ +++ + +YD FS I S +V +D+ + +S GY +V+F + A+ ++E
Sbjct: 35 ASLYVGDLEGNVNEEQLYDLFSQVAQIASIRVCRDQTKRSSLGYAYVNFANAQDASNAME 94
Query: 170 KVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGT 229
+N LN K + + F R ++ G NV+IKN +++ L + F +GT
Sbjct: 95 LLNFTPLNGKPIRI-MFSQRDPSIRKSGHG-----NVFIKNLDTSIDNKALHDTFAAFGT 148
Query: 230 ITSYRV-MNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQ-E 287
+ S +V +++ G+S+G+GFV +++ E A+ A++ NG ++ K +YVG ++ ER Q
Sbjct: 149 VLSCKVALDSSGQSKGYGFVQFDNEEAAQNAIKRLNGMLINDKQVYVGLFIRRQEREQTN 208
Query: 288 LKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSA 335
+F N+YVKNL ++ DE L+K F P+GTITSA
Sbjct: 209 GSPKF-------------TNVYVKNLSETYTDEDLKKLFGPYGTITSA 243
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 65/135 (48%), Gaps = 18/135 (13%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDGK--SRGFGFVAYESPEFAEKAVQ 261
++Y+ + + N+E+L ++F I S RV + K S G+ +V + + + A A++
Sbjct: 35 ASLYVGDLEGNVNEEQLYDLFSQVAQIASIRVCRDQTKRSSLGYAYVNFANAQDASNAME 94
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDER 321
N ++GK + + +Q+ + + N+++KNLD SID++
Sbjct: 95 LLNFTPLNGKPIRIMFSQRDPS----------------IRKSGHGNVFIKNLDTSIDNKA 138
Query: 322 LRKEFTPFGTITSAK 336
L F FGT+ S K
Sbjct: 139 LHDTFAAFGTVLSCK 153
>gi|356576101|ref|XP_003556172.1| PREDICTED: polyadenylate-binding protein 5-like isoform 1 [Glycine
max]
Length = 652
Score = 315 bits (808), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 154/263 (58%), Positives = 197/263 (74%), Gaps = 4/263 (1%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D A++ +NF L G+PIRIM+SQRDPS+RKSG GNVFIKNLD SIDNKA++DTF+AFG
Sbjct: 88 DASNAMELLNFTPLNGKPIRIMFSQRDPSIRKSGHGNVFIKNLDTSIDNKALHDTFAAFG 147
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
++LSCKVA D G SKGYGFV F+ EEAA +I+++NGML+N K V+VG FI R+ERE+
Sbjct: 148 TVLSCKVALDSSGQSKGYGFVQFDNEEAAQNAIKRLNGMLINDKQVYVGLFIRRQEREQT 207
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGKSRGFGFVAYESPE 254
G FTNVY+KN E + DE LK++F PYGTITS VM + +GKSR FGFV +++P+
Sbjct: 208 NGSPK--FTNVYVKNLSETYTDEDLKKLFGPYGTITSATVMKDVNGKSRCFGFVNFQNPD 265
Query: 255 FAEKAVQAWNGKEVDG-KILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNL 313
A AV+ NG ++ ++LYVGRAQ+KAER ELK + E +I R + QG NLY+KNL
Sbjct: 266 SAAAAVERLNGTTINNDRVLYVGRAQRKAEREAELKAKIEQERISRYEKLQGANLYLKNL 325
Query: 314 DDSIDDERLRKEFTPFGTITSAK 336
DDS DE+L+ F+ FGTITS K
Sbjct: 326 DDSFSDEKLKDLFSEFGTITSCK 348
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 75/199 (37%), Positives = 127/199 (63%), Gaps = 16/199 (8%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV++KNL ++ ++ + F +G+I S V +D G S+ +GFV+F+ ++A ++E++
Sbjct: 215 NVYVKNLSETYTDEDLKKLFGPYGTITSATVMKDVNGKSRCFGFVNFQNPDSAAAAVERL 274
Query: 172 NGMLLNS-KIVFVGKFIPRKEREKELGEKAKL------------FTNVYIKNFGEDFNDE 218
NG +N+ ++++VG+ + ERE EL KAK+ N+Y+KN + F+DE
Sbjct: 275 NGTTINNDRVLYVGRAQRKAEREAEL--KAKIEQERISRYEKLQGANLYLKNLDDSFSDE 332
Query: 219 KLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGR 277
KLK++F +GTITS +VM +++G+S+G GFV++ +PE A KA+ NGK + K LYV
Sbjct: 333 KLKDLFSEFGTITSCKVMIDSNGRSKGSGFVSFSTPEEASKALNEMNGKLIGRKPLYVAV 392
Query: 278 AQKKAERTQELKRRFEMLK 296
AQ+K ER L+ +F ++
Sbjct: 393 AQRKEERKAHLQAQFAQIR 411
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 129/228 (56%), Gaps = 22/228 (9%)
Query: 111 GNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSIE 169
++++ +L+ +++ + +YD FS I S +V +D+ + +S GY +V+F + A+ ++E
Sbjct: 35 ASLYVGDLEGNVNEEQLYDLFSQVAQIASIRVCRDQTKRSSLGYAYVNFANAQDASNAME 94
Query: 170 KVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGT 229
+N LN K + + F R ++ G NV+IKN +++ L + F +GT
Sbjct: 95 LLNFTPLNGKPIRI-MFSQRDPSIRKSGHG-----NVFIKNLDTSIDNKALHDTFAAFGT 148
Query: 230 ITSYRV-MNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQ-E 287
+ S +V +++ G+S+G+GFV +++ E A+ A++ NG ++ K +YVG ++ ER Q
Sbjct: 149 VLSCKVALDSSGQSKGYGFVQFDNEEAAQNAIKRLNGMLINDKQVYVGLFIRRQEREQTN 208
Query: 288 LKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSA 335
+F N+YVKNL ++ DE L+K F P+GTITSA
Sbjct: 209 GSPKF-------------TNVYVKNLSETYTDEDLKKLFGPYGTITSA 243
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 65/135 (48%), Gaps = 18/135 (13%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDGK--SRGFGFVAYESPEFAEKAVQ 261
++Y+ + + N+E+L ++F I S RV + K S G+ +V + + + A A++
Sbjct: 35 ASLYVGDLEGNVNEEQLYDLFSQVAQIASIRVCRDQTKRSSLGYAYVNFANAQDASNAME 94
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDER 321
N ++GK + + +Q+ + + N+++KNLD SID++
Sbjct: 95 LLNFTPLNGKPIRIMFSQRDPS----------------IRKSGHGNVFIKNLDTSIDNKA 138
Query: 322 LRKEFTPFGTITSAK 336
L F FGT+ S K
Sbjct: 139 LHDTFAAFGTVLSCK 153
>gi|358394883|gb|EHK44276.1| hypothetical protein TRIATDRAFT_79372 [Trichoderma atroviride IMI
206040]
Length = 746
Score = 315 bits (807), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 155/262 (59%), Positives = 204/262 (77%), Gaps = 1/262 (0%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D E+AL+ +N+ +KGRP RIMWSQRDP+LRK+G GNVFIKNLD +IDNKA++DTF+AFG
Sbjct: 112 DGEKALEELNYTPIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDVAIDNKALHDTFAAFG 171
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCKVAQDE G SKGYGFVH+ET+EAA ++I+ VNGMLLN K V+VG IP+K+R+ +
Sbjct: 172 NILSCKVAQDETGASKGYGFVHYETDEAAAQAIKHVNGMLLNEKKVYVGYHIPKKDRQSK 231
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPE 254
E FTNVY+KN D D + +E+FE YG +TS + + +GKSRGFGFV + + E
Sbjct: 232 FEEMKANFTNVYVKNISPDVTDNEFRELFEKYGDVTSSSLARDQEGKSRGFGFVNFTTHE 291
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A KAV NG + G+ LYVGRAQKK ER +EL++ +E ++E+ ++YQGVNLY+KNLD
Sbjct: 292 AAYKAVDELNGNDFRGQELYVGRAQKKHEREEELRKSYEAARLEKASKYQGVNLYIKNLD 351
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
D +DD++LR+ F+ FG ITSAK
Sbjct: 352 DDVDDDKLRQMFSEFGPITSAK 373
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/238 (31%), Positives = 121/238 (50%), Gaps = 55/238 (23%)
Query: 107 KSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANK 166
K+ NV++KN+ + + + F +G + S +A+D++G S+G+GFV+F T EAA K
Sbjct: 236 KANFTNVYVKNISPDVTDNEFRELFEKYGDVTSSSLARDQEGKSRGFGFVNFTTHEAAYK 295
Query: 167 SIEKVNGMLLNSKIVFVGKFIPRKEREKELG--------EKAKLF--TNVYIKNFGEDFN 216
+++++NG + ++VG+ + ERE+EL EKA + N+YIKN +D +
Sbjct: 296 AVDELNGNDFRGQELYVGRAQKKHEREEELRKSYEAARLEKASKYQGVNLYIKNLDDDVD 355
Query: 217 DEKLKEMFEPYGTITSYRVMNND------------------------------------- 239
D+KL++MF +G ITS +VM +
Sbjct: 356 DDKLRQMFSEFGPITSAKVMRDSLQEGEEEVKDQEKDKENQKEAENEAEAESAENAEKKA 415
Query: 240 --------GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELK 289
GKS+GFGFV + +P+ A KAV N + ++ K LYV AQ+K R +L+
Sbjct: 416 EKKGDKKLGKSKGFGFVCFSNPDDATKAVAEMNQRMINNKPLYVALAQRKDVRKSQLE 473
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 61/135 (45%), Gaps = 18/135 (13%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQ 261
++Y+ + L E+F G + S RV + +S G+ +V Y S EKA++
Sbjct: 59 ASLYVGELDPSVTEAMLFELFSQIGAVASIRVCRDAVTRRSLGYAYVNYNSTPDGEKALE 118
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDER 321
N + G+ + +Q R L++ QG N+++KNLD +ID++
Sbjct: 119 ELNYTPIKGRPCRIMWSQ----RDPALRKTG-----------QG-NVFIKNLDVAIDNKA 162
Query: 322 LRKEFTPFGTITSAK 336
L F FG I S K
Sbjct: 163 LHDTFAAFGNILSCK 177
>gi|453085206|gb|EMF13249.1| polyadenylate binding protein [Mycosphaerella populorum SO2202]
Length = 760
Score = 315 bits (806), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 154/262 (58%), Positives = 195/262 (74%), Gaps = 1/262 (0%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D ERAL+ +N+ +KG+P RIMWSQRDP+LRK+G GN+FIKNLD +IDNKA++DTF+AFG
Sbjct: 106 DGERALEELNYTLIKGKPCRIMWSQRDPALRKTGHGNIFIKNLDAAIDNKALHDTFAAFG 165
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCKVAQDE G S+GYGFVH+ET EAAN +I+ VNGMLLN K VFVG IP+K+R +
Sbjct: 166 NILSCKVAQDESGGSRGYGFVHYETAEAANAAIKSVNGMLLNEKKVFVGHHIPKKDRMSK 225
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPE 254
E FTN+Y+KN + D++ +E+FE YG ITS + + +GK RGFGFV Y E
Sbjct: 226 FEEMKANFTNIYVKNIDTETTDDEFRELFEKYGEITSASLARDQEGKVRGFGFVNYIRHE 285
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A KAV N + + LYVGRAQKK ER +EL+R++E + E+ +Y GVNLYVKNL
Sbjct: 286 DANKAVDELNDIDFKSQKLYVGRAQKKHEREEELRRQYEAQRQEKSAKYMGVNLYVKNLA 345
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
D IDDE LRK F +G+ITSAK
Sbjct: 346 DDIDDEELRKVFEAYGSITSAK 367
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 89/142 (62%), Gaps = 10/142 (7%)
Query: 107 KSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANK 166
K+ N+++KN+D + + F +G I S +A+D++G +G+GFV++ E ANK
Sbjct: 230 KANFTNIYVKNIDTETTDDEFRELFEKYGEITSASLARDQEGKVRGFGFVNYIRHEDANK 289
Query: 167 SIEKVNGMLLNSKIVFVGKFIPRKEREKEL--------GEKAKLF--TNVYIKNFGEDFN 216
+++++N + S+ ++VG+ + ERE+EL EK+ + N+Y+KN +D +
Sbjct: 290 AVDELNDIDFKSQKLYVGRAQKKHEREEELRRQYEAQRQEKSAKYMGVNLYVKNLADDID 349
Query: 217 DEKLKEMFEPYGTITSYRVMNN 238
DE+L+++FE YG+ITS +VM +
Sbjct: 350 DEELRKVFEAYGSITSAKVMRD 371
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 78/178 (43%), Gaps = 37/178 (20%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
N+++KNL ID++ + F A+GSI S KV +D ++ N EK
Sbjct: 338 NLYVKNLADDIDDEELRKVFEAYGSITSAKVMRDTT-----------PADQVENAEEEK- 385
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTIT 231
KE GE + ++ ++ E+L + +
Sbjct: 386 ----------------------KEDGENEAESSEEKKEDEKKEDGTEELTKKLDTVTIGG 423
Query: 232 SYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELK 289
+V+ GKS+GFGFV + +P+ A KAV N K + GK LYV AQ+K R +L+
Sbjct: 424 EKKVL---GKSKGFGFVCFSNPDEATKAVTELNQKMIHGKPLYVALAQRKEVRKSQLE 478
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 58/135 (42%), Gaps = 18/135 (13%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQ 261
++Y+ + L E+F G + S RV + +S G+ +V Y S E+A++
Sbjct: 53 ASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNSANDGERALE 112
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDER 321
N + GK + +Q+ L + N+++KNLD +ID++
Sbjct: 113 ELNYTLIKGKPCRIMWSQRDPA----------------LRKTGHGNIFIKNLDAAIDNKA 156
Query: 322 LRKEFTPFGTITSAK 336
L F FG I S K
Sbjct: 157 LHDTFAAFGNILSCK 171
>gi|408395605|gb|EKJ74783.1| hypothetical protein FPSE_05031 [Fusarium pseudograminearum CS3096]
Length = 749
Score = 314 bits (805), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 154/262 (58%), Positives = 205/262 (78%), Gaps = 1/262 (0%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D E+AL+ +N+ +KGRP RIMWSQRDP+LRK+G GNVFIKNLD +IDNKA++DTF+AFG
Sbjct: 112 DGEKALEELNYTIIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDVAIDNKALHDTFAAFG 171
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCKVAQDE G SKGYGFVH+ET+EAA+++I+ VNGMLLN K V+VG IP+K+R+ +
Sbjct: 172 NILSCKVAQDETGASKGYGFVHYETDEAASQAIKHVNGMLLNEKKVYVGHHIPKKDRQSK 231
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPE 254
E FTNVY+KN D ++ +++FE YG +TS + + +GKSRGFGFV + + E
Sbjct: 232 FEEMKANFTNVYVKNIAADVTEDDFRQLFEKYGDVTSSSLARDQEGKSRGFGFVNFTTHE 291
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A KAV N K+ G+ LYVGRAQKK ER +EL++ +E ++E+ N+YQGVNLY+KNLD
Sbjct: 292 SAFKAVDELNNKDFHGQDLYVGRAQKKHEREEELRKSYEAARLEKANKYQGVNLYIKNLD 351
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
D +DD++LR+ F FG+ITSAK
Sbjct: 352 DDVDDDKLREMFKDFGSITSAK 373
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 50/140 (35%), Positives = 87/140 (62%), Gaps = 10/140 (7%)
Query: 107 KSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANK 166
K+ NV++KN+ + F +G + S +A+D++G S+G+GFV+F T E+A K
Sbjct: 236 KANFTNVYVKNIAADVTEDDFRQLFEKYGDVTSSSLARDQEGKSRGFGFVNFTTHESAFK 295
Query: 167 SIEKVNGMLLNSKIVFVGKFIPRKEREKELG--------EKAKLF--TNVYIKNFGEDFN 216
+++++N + + ++VG+ + ERE+EL EKA + N+YIKN +D +
Sbjct: 296 AVDELNNKDFHGQDLYVGRAQKKHEREEELRKSYEAARLEKANKYQGVNLYIKNLDDDVD 355
Query: 217 DEKLKEMFEPYGTITSYRVM 236
D+KL+EMF+ +G+ITS +VM
Sbjct: 356 DDKLREMFKDFGSITSAKVM 375
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 38/67 (56%)
Query: 240 GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIER 299
GKS+GFGFV + +P+ A KAV N + +GK LYV AQ+K R +L+ + R
Sbjct: 434 GKSKGFGFVCFSNPDDATKAVAEMNQRMFNGKPLYVALAQRKDVRKSQLEASIQARNQLR 493
Query: 300 LNRYQGV 306
+ + V
Sbjct: 494 MQQAAAV 500
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 61/135 (45%), Gaps = 18/135 (13%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQ 261
++Y+ + L E+F G + S RV + +S G+ +V Y + EKA++
Sbjct: 59 ASLYVGELDPSVTEAMLFELFSQIGAVASIRVCRDAVTRRSLGYAYVNYNATPDGEKALE 118
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDER 321
N + G+ + +Q R L++ QG N+++KNLD +ID++
Sbjct: 119 ELNYTIIKGRPCRIMWSQ----RDPALRKTG-----------QG-NVFIKNLDVAIDNKA 162
Query: 322 LRKEFTPFGTITSAK 336
L F FG I S K
Sbjct: 163 LHDTFAAFGNILSCK 177
>gi|254567738|ref|XP_002490979.1| Poly(A) binding protein, part of the 3'-end RNA-processing complex,
mediates interactions between th [Komagataella pastoris
GS115]
gi|238030776|emb|CAY68699.1| Poly(A) binding protein, part of the 3'-end RNA-processing complex,
mediates interactions between th [Komagataella pastoris
GS115]
gi|328352488|emb|CCA38887.1| Polyadenylate-binding protein, cytoplasmic and nuclear
[Komagataella pastoris CBS 7435]
Length = 626
Score = 314 bits (804), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 146/260 (56%), Positives = 201/260 (77%), Gaps = 1/260 (0%)
Query: 78 ERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSI 137
ERAL+ +N+ +KG R+MWSQRDPSLR+SG GN+FIKNLD +I+NK ++DTFS+FG +
Sbjct: 107 ERALEELNYAEIKGVRCRLMWSQRDPSLRRSGSGNIFIKNLDPAIENKTLHDTFSSFGKV 166
Query: 138 LSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELG 197
LSCKVA DE GNSKG+GFVH+E++EAA +IE +NGMLLN + ++VG + +K+RE
Sbjct: 167 LSCKVATDENGNSKGFGFVHYESDEAAQAAIENINGMLLNGREIYVGPHLAKKDRESRFQ 226
Query: 198 EKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRV-MNNDGKSRGFGFVAYESPEFA 256
E K +TNV++KNF + +++L+E+FE YG ITS + ++++G ++GFGFV + + A
Sbjct: 227 EMIKNYTNVFVKNFDTESTEDELRELFESYGPITSIHLQVDSEGHNKGFGFVNFAEHDDA 286
Query: 257 EKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDS 316
KAV+A N KE GK LYVGRAQKK ER EL +++E ++E+L +YQ VNL++KNLD+S
Sbjct: 287 VKAVEALNDKEYKGKPLYVGRAQKKNERVHELTKKYEADRLEKLQKYQSVNLFIKNLDES 346
Query: 317 IDDERLRKEFTPFGTITSAK 336
IDD RL +EF PFGTITSAK
Sbjct: 347 IDDARLEEEFKPFGTITSAK 366
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 75/205 (36%), Positives = 115/205 (56%), Gaps = 11/205 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NVF+KN D + + F ++G I S + D +G++KG+GFV+F + A K++E +
Sbjct: 234 NVFVKNFDTESTEDELRELFESYGPITSIHLQVDSEGHNKGFGFVNFAEHDDAVKAVEAL 293
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKL----------FTNVYIKNFGEDFNDEKLK 221
N K ++VG+ + ER EL +K + N++IKN E +D +L+
Sbjct: 294 NDKEYKGKPLYVGRAQKKNERVHELTKKYEADRLEKLQKYQSVNLFIKNLDESIDDARLE 353
Query: 222 EMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
E F+P+GTITS +VM + +GKSRGFGFV +PE A KA+ N + V K LYV AQ
Sbjct: 354 EEFKPFGTITSAKVMLDENGKSRGFGFVCLSTPEEATKAISEMNQRMVANKPLYVALAQP 413
Query: 281 KAERTQELKRRFEMLKIERLNRYQG 305
KA R +L ++ + R+ + G
Sbjct: 414 KAIRRSQLAQQIQARNQMRMQQQAG 438
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 123/227 (54%), Gaps = 18/227 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
+ ++++ LD ++ +Y+ FS GS+ S +V +D S GYG+V+F ++ A +++
Sbjct: 51 LASLYVGELDPTVTESDLYEFFSPIGSVNSIRVCRDAVTKRSLGYGYVNFHSQAAGERAL 110
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
E++N ++I V + +R+ L N++IKN ++ L + F +G
Sbjct: 111 EELN----YAEIKGVRCRLMWSQRDPSLRRSGS--GNIFIKNLDPAIENKTLHDTFSSFG 164
Query: 229 TITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQE 287
+ S +V ++ G S+GFGFV YES E A+ A++ NG ++G+ +YVG K +R
Sbjct: 165 KVLSCKVATDENGNSKGFGFVHYESDEAAQAAIENINGMLLNGREIYVGPHLAKKDR--- 221
Query: 288 LKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITS 334
+ RF+ E + Y N++VKN D ++ LR+ F +G ITS
Sbjct: 222 -ESRFQ----EMIKNY--TNVFVKNFDTESTEDELRELFESYGPITS 261
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 75/140 (53%), Gaps = 16/140 (11%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQ----------------RDPSLRKSGVGNVFIKNLD 119
D +A++ +N KG+P+ + +Q R L+K N+FIKNLD
Sbjct: 285 DAVKAVEALNDKEYKGKPLYVGRAQKKNERVHELTKKYEADRLEKLQKYQSVNLFIKNLD 344
Query: 120 KSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSK 179
+SID+ + + F FG+I S KV DE G S+G+GFV T E A K+I ++N ++ +K
Sbjct: 345 ESIDDARLEEEFKPFGTITSAKVMLDENGKSRGFGFVCLSTPEEATKAISEMNQRMVANK 404
Query: 180 IVFVGKFIPRKEREKELGEK 199
++V P+ R +L ++
Sbjct: 405 PLYVALAQPKAIRRSQLAQQ 424
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 64/141 (45%), Gaps = 18/141 (12%)
Query: 198 EKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEF 255
+ ++ ++Y+ + L E F P G++ S RV + +S G+G+V + S
Sbjct: 46 QASETLASLYVGELDPTVTESDLYEFFSPIGSVNSIRVCRDAVTKRSLGYGYVNFHSQAA 105
Query: 256 AEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDD 315
E+A++ N E+ G + +Q+ L R N+++KNLD
Sbjct: 106 GERALEELNYAEIKGVRCRLMWSQRDP----------------SLRRSGSGNIFIKNLDP 149
Query: 316 SIDDERLRKEFTPFGTITSAK 336
+I+++ L F+ FG + S K
Sbjct: 150 AIENKTLHDTFSSFGKVLSCK 170
>gi|403169799|ref|XP_003329214.2| hypothetical protein PGTG_10266 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375168425|gb|EFP84795.2| hypothetical protein PGTG_10266 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 804
Score = 314 bits (804), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 154/262 (58%), Positives = 194/262 (74%), Gaps = 1/262 (0%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D ERAL+ +N+ +K + RIMWSQRDPSLRK+G GN+FIKNLD++IDNKA++DTF+AFG
Sbjct: 226 DAERALEQLNYSLIKNKACRIMWSQRDPSLRKTGQGNIFIKNLDETIDNKALHDTFAAFG 285
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
ILSCKVA DE G SKGYGFVH+ T E+A +I+ VNGM LN K+VFVG +PR++R+ +
Sbjct: 286 DILSCKVATDEHGASKGYGFVHYVTGESAEAAIKGVNGMQLNDKVVFVGIHVPRRDRQAK 345
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPE 254
+ E FTN+YIKN + E+L E+F +G ITS V +++ GK RGFGFV YE+ E
Sbjct: 346 IDEVRSQFTNLYIKNLPTETTTEELNEVFGKFGPITSAAVQSDEHGKHRGFGFVNYENHE 405
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A KAV A + K+ G +LYV RAQK+ ER ELK+ E K E +YQGVNLYVKNLD
Sbjct: 406 SASKAVDALHDKDYKGNVLYVARAQKRTERDAELKKAHEQQKYETTLKYQGVNLYVKNLD 465
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
D DDE+L+ EFTPFGTITS K
Sbjct: 466 DEYDDEKLQNEFTPFGTITSCK 487
Score = 137 bits (344), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 75/197 (38%), Positives = 117/197 (59%), Gaps = 11/197 (5%)
Query: 107 KSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANK 166
+S N++IKNL + + + F FG I S V DE G +G+GFV++E E+A+K
Sbjct: 350 RSQFTNLYIKNLPTETTTEELNEVFGKFGPITSAAVQSDEHGKHRGFGFVNYENHESASK 409
Query: 167 SIEKVNGMLLNSKIVFVGKFIPRKEREKEL---GEKAKLFT-------NVYIKNFGEDFN 216
+++ ++ +++V + R ER+ EL E+ K T N+Y+KN ++++
Sbjct: 410 AVDALHDKDYKGNVLYVARAQKRTERDAELKKAHEQQKYETTLKYQGVNLYVKNLDDEYD 469
Query: 217 DEKLKEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYV 275
DEKL+ F P+GTITS +VM ++ G S+GFGFV + SP+ A KAV NGK + K LYV
Sbjct: 470 DEKLQNEFTPFGTITSCKVMKDEKGTSKGFGFVCFSSPDEATKAVAEMNGKMLGSKPLYV 529
Query: 276 GRAQKKAERTQELKRRF 292
AQ+K R Q+L+ +
Sbjct: 530 SLAQRKEVRKQQLEAQM 546
Score = 80.9 bits (198), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 63/92 (68%), Gaps = 2/92 (2%)
Query: 104 SLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEA 163
+L+ GV N+++KNLD D++ + + F+ FG+I SCKV +DE+G SKG+GFV F + +
Sbjct: 451 TLKYQGV-NLYVKNLDDEYDDEKLQNEFTPFGTITSCKVMKDEKGTSKGFGFVCFSSPDE 509
Query: 164 ANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
A K++ ++NG +L SK ++V RKE K+
Sbjct: 510 ATKAVAEMNGKMLGSKPLYV-SLAQRKEVRKQ 540
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 63/135 (46%), Gaps = 18/135 (13%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQ 261
T++Y+ + L E+F G + S RV + +S G+ +V Y + AE+A++
Sbjct: 173 TSLYVGELDPTVTEAMLYEIFSMIGPVASIRVCRDAVTRRSLGYAYVNYLNAADAERALE 232
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDER 321
N + K + +Q R L++ QG N+++KNLD++ID++
Sbjct: 233 QLNYSLIKNKACRIMWSQ----RDPSLRKTG-----------QG-NIFIKNLDETIDNKA 276
Query: 322 LRKEFTPFGTITSAK 336
L F FG I S K
Sbjct: 277 LHDTFAAFGDILSCK 291
>gi|356552218|ref|XP_003544466.1| PREDICTED: polyadenylate-binding protein 2-like [Glycine max]
Length = 652
Score = 314 bits (804), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 155/262 (59%), Positives = 197/262 (75%), Gaps = 3/262 (1%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D RALD +NF L RPIRIM+S RDPSLRKSG N+FIKNLDK+ID+KA++DTFS+FG
Sbjct: 86 DAARALDVLNFTPLNNRPIRIMYSHRDPSLRKSGTANIFIKNLDKAIDHKALHDTFSSFG 145
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
ILSCK+A D G SKGYGFV F++EE+A +I+K+NGML+N K V+VG F+ +++RE
Sbjct: 146 LILSCKIATDASGLSKGYGFVQFDSEESAQNAIDKLNGMLINDKQVYVGHFLRKQDRENA 205
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGKSRGFGFVAYESPE 254
L + F NVY+KN E DE+L + F YGTITS +M + DGKSR FGFV +E+P+
Sbjct: 206 LSKTK--FNNVYVKNLSESTTDEELMKFFGEYGTITSAVIMRDADGKSRCFGFVNFENPD 263
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A KAV+ NGK+VD K YVG+AQKK+ER QELK RFE E ++YQGVNLY+KNLD
Sbjct: 264 DAAKAVEGLNGKKVDDKEWYVGKAQKKSEREQELKGRFEQSIKESADKYQGVNLYLKNLD 323
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
D+I DE+L++ F +GTITS K
Sbjct: 324 DTISDEKLKEMFAEYGTITSCK 345
Score = 144 bits (363), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 82/207 (39%), Positives = 125/207 (60%), Gaps = 11/207 (5%)
Query: 101 RDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFET 160
R+ +L K+ NV++KNL +S ++ + F +G+I S + +D G S+ +GFV+FE
Sbjct: 202 RENALSKTKFNNVYVKNLSESTTDEELMKFFGEYGTITSAVIMRDADGKSRCFGFVNFEN 261
Query: 161 EEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELG--------EKAKLF--TNVYIKN 210
+ A K++E +NG ++ K +VGK + ERE+EL E A + N+Y+KN
Sbjct: 262 PDDAAKAVEGLNGKKVDDKEWYVGKAQKKSEREQELKGRFEQSIKESADKYQGVNLYLKN 321
Query: 211 FGEDFNDEKLKEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVD 269
+ +DEKLKEMF YGTITS +VM + G RG GFVA+ +PE A +A+ NGK +
Sbjct: 322 LDDTISDEKLKEMFAEYGTITSCKVMRDPTGIGRGSGFVAFSTPEEASRALGEMNGKMIA 381
Query: 270 GKILYVGRAQKKAERTQELKRRFEMLK 296
GK LYV AQ+K +R L+ +F ++
Sbjct: 382 GKPLYVALAQRKEDRRARLQAQFSQMR 408
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 123/227 (54%), Gaps = 22/227 (9%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQD-EQGNSKGYGFVHFETEEAANKSIEK 170
++++ +L++++++ +YD F+ ++S +V +D S GYG+V+F + A ++++
Sbjct: 34 SLYVGDLEQNVNDAQLYDLFNQVVQVVSVRVCRDLTTRRSLGYGYVNFSNPQDAARALDV 93
Query: 171 VNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTI 230
+N LN++ + I R+ L + N++IKN + + + L + F +G I
Sbjct: 94 LNFTPLNNRPI----RIMYSHRDPSLRKSGT--ANIFIKNLDKAIDHKALHDTFSSFGLI 147
Query: 231 TSYRVMNN-DGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL- 288
S ++ + G S+G+GFV ++S E A+ A+ NG ++ K +YVG +K +R L
Sbjct: 148 LSCKIATDASGLSKGYGFVQFDSEESAQNAIDKLNGMLINDKQVYVGHFLRKQDRENALS 207
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSA 335
K +F N+YVKNL +S DE L K F +GTITSA
Sbjct: 208 KTKFN-------------NVYVKNLSESTTDEELMKFFGEYGTITSA 241
Score = 45.8 bits (107), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 65/135 (48%), Gaps = 18/135 (13%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQ 261
T++Y+ + ++ ND +L ++F + S RV + +S G+G+V + +P+ A +A+
Sbjct: 33 TSLYVGDLEQNVNDAQLYDLFNQVVQVVSVRVCRDLTTRRSLGYGYVNFSNPQDAARALD 92
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDER 321
N ++ + + + + + L + N+++KNLD +ID +
Sbjct: 93 VLNFTPLNNRPIRIMYSHRDPS----------------LRKSGTANIFIKNLDKAIDHKA 136
Query: 322 LRKEFTPFGTITSAK 336
L F+ FG I S K
Sbjct: 137 LHDTFSSFGLILSCK 151
>gi|403169797|ref|XP_003889581.1| hypothetical protein, variant [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375168424|gb|EHS63645.1| hypothetical protein, variant [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 715
Score = 314 bits (804), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 154/262 (58%), Positives = 194/262 (74%), Gaps = 1/262 (0%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D ERAL+ +N+ +K + RIMWSQRDPSLRK+G GN+FIKNLD++IDNKA++DTF+AFG
Sbjct: 137 DAERALEQLNYSLIKNKACRIMWSQRDPSLRKTGQGNIFIKNLDETIDNKALHDTFAAFG 196
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
ILSCKVA DE G SKGYGFVH+ T E+A +I+ VNGM LN K+VFVG +PR++R+ +
Sbjct: 197 DILSCKVATDEHGASKGYGFVHYVTGESAEAAIKGVNGMQLNDKVVFVGIHVPRRDRQAK 256
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPE 254
+ E FTN+YIKN + E+L E+F +G ITS V +++ GK RGFGFV YE+ E
Sbjct: 257 IDEVRSQFTNLYIKNLPTETTTEELNEVFGKFGPITSAAVQSDEHGKHRGFGFVNYENHE 316
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A KAV A + K+ G +LYV RAQK+ ER ELK+ E K E +YQGVNLYVKNLD
Sbjct: 317 SASKAVDALHDKDYKGNVLYVARAQKRTERDAELKKAHEQQKYETTLKYQGVNLYVKNLD 376
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
D DDE+L+ EFTPFGTITS K
Sbjct: 377 DEYDDEKLQNEFTPFGTITSCK 398
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 74/192 (38%), Positives = 115/192 (59%), Gaps = 11/192 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
N++IKNL + + + F FG I S V DE G +G+GFV++E E+A+K+++ +
Sbjct: 266 NLYIKNLPTETTTEELNEVFGKFGPITSAAVQSDEHGKHRGFGFVNYENHESASKAVDAL 325
Query: 172 NGMLLNSKIVFVGKFIPRKEREKEL---GEKAKLFT-------NVYIKNFGEDFNDEKLK 221
+ +++V + R ER+ EL E+ K T N+Y+KN ++++DEKL+
Sbjct: 326 HDKDYKGNVLYVARAQKRTERDAELKKAHEQQKYETTLKYQGVNLYVKNLDDEYDDEKLQ 385
Query: 222 EMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
F P+GTITS +VM ++ G S+GFGFV + SP+ A KAV NGK + K LYV AQ+
Sbjct: 386 NEFTPFGTITSCKVMKDEKGTSKGFGFVCFSSPDEATKAVAEMNGKMLGSKPLYVSLAQR 445
Query: 281 KAERTQELKRRF 292
K R Q+L+ +
Sbjct: 446 KEVRKQQLEAQM 457
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 63/92 (68%), Gaps = 2/92 (2%)
Query: 104 SLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEA 163
+L+ GV N+++KNLD D++ + + F+ FG+I SCKV +DE+G SKG+GFV F + +
Sbjct: 362 TLKYQGV-NLYVKNLDDEYDDEKLQNEFTPFGTITSCKVMKDEKGTSKGFGFVCFSSPDE 420
Query: 164 ANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
A K++ ++NG +L SK ++V RKE K+
Sbjct: 421 ATKAVAEMNGKMLGSKPLYV-SLAQRKEVRKQ 451
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 63/135 (46%), Gaps = 18/135 (13%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQ 261
T++Y+ + L E+F G + S RV + +S G+ +V Y + AE+A++
Sbjct: 84 TSLYVGELDPTVTEAMLYEIFSMIGPVASIRVCRDAVTRRSLGYAYVNYLNAADAERALE 143
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDER 321
N + K + +Q R L++ QG N+++KNLD++ID++
Sbjct: 144 QLNYSLIKNKACRIMWSQ----RDPSLRKTG-----------QG-NIFIKNLDETIDNKA 187
Query: 322 LRKEFTPFGTITSAK 336
L F FG I S K
Sbjct: 188 LHDTFAAFGDILSCK 202
>gi|328871935|gb|EGG20305.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
fasciculatum]
Length = 567
Score = 313 bits (803), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 153/263 (58%), Positives = 202/263 (76%), Gaps = 13/263 (4%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D ERALDT+N +KG+ RIMWSQRDPSLRKSGVGN+FIKNLDKS+D+KA++DTFSAFG
Sbjct: 61 DAERALDTLNNTLVKGKACRIMWSQRDPSLRKSGVGNIFIKNLDKSVDHKALFDTFSAFG 120
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCKV DE SKG+GFVH+E++++A+K+I KVNGM++N + VFVG F KER
Sbjct: 121 NILSCKVVTDETNVSKGFGFVHYESQDSADKAIMKVNGMIINDQKVFVGPFKSSKER--- 177
Query: 196 LGEKAKL-FTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GKSRGFGFVAYESP 253
G+ +L +TNVY+KN ED N+E+L+++ PYG IT+ +M+++ KS+GFGF +E+P
Sbjct: 178 -GQTQELKYTNVYVKNLSEDVNEEELRDLLVPYGKITNLTIMSDEKSKSKGFGFANFETP 236
Query: 254 EFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNL 313
+ A+ V+A NGK GK++YVGRAQKK ER ELK +FE +YQGVNLY+KN+
Sbjct: 237 DEAKNCVEAENGKLFHGKVIYVGRAQKKMEREAELKHKFE-------TKYQGVNLYIKNI 289
Query: 314 DDSIDDERLRKEFTPFGTITSAK 336
DDSID ++LR F +GTITSAK
Sbjct: 290 DDSIDSDKLRSTFAAYGTITSAK 312
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 75/194 (38%), Positives = 113/194 (58%), Gaps = 5/194 (2%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV++KNL + ++ + + D +G I + + DE+ SKG+GF +FET + A +E
Sbjct: 187 NVYVKNLSEDVNEEELRDLLVPYGKITNLTIMSDEKSKSKGFGFANFETPDEAKNCVEAE 246
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKL---FTNVYIKNFGEDFNDEKLKEMFEPYG 228
NG L + K+++VG+ + ERE EL K + N+YIKN + + +KL+ F YG
Sbjct: 247 NGKLFHGKVIYVGRAQKKMEREAELKHKFETKYQGVNLYIKNIDDSIDSDKLRSTFAAYG 306
Query: 229 TITSYRVMNND--GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQ 286
TITS +VM +D S+GFGFV Y +P+ A KAV +G+ V K LYV AQ+K R Q
Sbjct: 307 TITSAKVMRDDKSTSSKGFGFVCYTTPDEASKAVAEMHGRMVGNKPLYVAFAQRKEIRRQ 366
Query: 287 ELKRRFEMLKIERL 300
L+ + K R+
Sbjct: 367 HLEAQHNKFKGNRI 380
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 63/136 (46%), Gaps = 20/136 (14%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDGKSRG--FGFVAYESPEFAEKAVQ 261
+++Y+ + +D D +L E+F G + + R+ + R + +V Y +P AE+A+
Sbjct: 8 SSLYVGDLHQDVTDSQLFEIFNQVGPVANLRICRDTTTRRSLNYAYVNYHNPADAERALD 67
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGV-NLYVKNLDDSIDDE 320
N V GK + +Q+ R GV N+++KNLD S+D +
Sbjct: 68 TLNNTLVKGKACRIMWSQRDPSL-----------------RKSGVGNIFIKNLDKSVDHK 110
Query: 321 RLRKEFTPFGTITSAK 336
L F+ FG I S K
Sbjct: 111 ALFDTFSAFGNILSCK 126
>gi|384486188|gb|EIE78368.1| hypothetical protein RO3G_03072 [Rhizopus delemar RA 99-880]
Length = 499
Score = 313 bits (802), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 162/264 (61%), Positives = 205/264 (77%), Gaps = 1/264 (0%)
Query: 74 MLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSA 133
M D ERAL+T+N+ +KGR RIMWSQRDPSLRK GN+FIKNLD SID+KA++DTFSA
Sbjct: 79 MADAERALETLNYSMIKGRSCRIMWSQRDPSLRKGNNGNIFIKNLDPSIDHKALHDTFSA 138
Query: 134 FGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKERE 193
FG+ILSCK+A DEQGNSKGYGFVH+ET EAA +I+ VNGMLLN + VFVG I RKERE
Sbjct: 139 FGNILSCKIAHDEQGNSKGYGFVHYETLEAAESAIKSVNGMLLNDRKVFVGHHISRKERE 198
Query: 194 KELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYES 252
+LGE FTN+Y+KN D DE+L ++F YGTITS + ++DG S+GFGFV +E
Sbjct: 199 SKLGESRVQFTNIYVKNIPFDVTDEELSQLFGKYGTITSCVITRDDDGTSKGFGFVNFEK 258
Query: 253 PEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKN 312
+ A+ AV + K+ G+ LYV RAQKK ER +EL+R++E K+E++++YQGVNLYVKN
Sbjct: 259 HQDAQNAVDDLHKKDFRGQDLYVSRAQKKNEREEELRRQYEEAKLEKMSKYQGVNLYVKN 318
Query: 313 LDDSIDDERLRKEFTPFGTITSAK 336
LDD +DD+RLR EF+ +G ITSAK
Sbjct: 319 LDDDMDDDRLRDEFSVYGVITSAK 342
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 76/231 (32%), Positives = 131/231 (56%), Gaps = 18/231 (7%)
Query: 77 TERALDTMNFDALKGRPI----RIMWSQRDPSLRKSGV--GNVFIKNLDKSIDNKAMYDT 130
E A+ ++N L R + I +R+ L +S V N+++KN+ + ++ +
Sbjct: 169 AESAIKSVNGMLLNDRKVFVGHHISRKERESKLGESRVQFTNIYVKNIPFDVTDEELSQL 228
Query: 131 FSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRK 190
F +G+I SC + +D+ G SKG+GFV+FE + A +++ ++ + ++V + +
Sbjct: 229 FGKYGTITSCVITRDDDGTSKGFGFVNFEKHQDAQNAVDDLHKKDFRGQDLYVSRAQKKN 288
Query: 191 EREKELG---EKAKL-------FTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDG 240
ERE+EL E+AKL N+Y+KN +D +D++L++ F YG ITS ++M ++
Sbjct: 289 EREEELRRQYEEAKLEKMSKYQGVNLYVKNLDDDMDDDRLRDEFSVYGVITSAKIMRDEK 348
Query: 241 K--SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELK 289
SRGFGFV + SPE A +AV NG+ + K +YV AQ+K R +L+
Sbjct: 349 TNISRGFGFVCFTSPEDATRAVTEMNGRIIGSKPIYVAIAQRKEVRRSQLE 399
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 117/227 (51%), Gaps = 18/227 (7%)
Query: 111 GNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSIE 169
++++ LD S+ +++ F+ G + S +V +D S GY +V+F A +++E
Sbjct: 28 ASLYVGELDPSVTEAMLFEMFNIIGPVSSIRVCRDAVTRRSLGYAYVNFHRMADAERALE 87
Query: 170 KVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGT 229
+N ++ + I +R+ L + N++IKN + + L + F +G
Sbjct: 88 TLNYSMIKGRSC----RIMWSQRDPSLRKGNN--GNIFIKNLDPSIDHKALHDTFSAFGN 141
Query: 230 ITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S ++ +++ G S+G+GFV YE+ E AE A+++ NG ++ + ++VG + ER +L
Sbjct: 142 ILSCKIAHDEQGNSKGYGFVHYETLEAAESAIKSVNGMLLNDRKVFVGHHISRKERESKL 201
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSA 335
+R Q N+YVKN+ + DE L + F +GTITS
Sbjct: 202 GE----------SRVQFTNIYVKNIPFDVTDEELSQLFGKYGTITSC 238
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 63/142 (44%), Gaps = 19/142 (13%)
Query: 198 EKAKLFT-NVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPE 254
E A L + ++Y+ + L EMF G ++S RV + +S G+ +V +
Sbjct: 21 ESAPLASASLYVGELDPSVTEAMLFEMFNIIGPVSSIRVCRDAVTRRSLGYAYVNFHRMA 80
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
AE+A++ N + G+ + +Q+ L + N+++KNLD
Sbjct: 81 DAERALETLNYSMIKGRSCRIMWSQRDPS----------------LRKGNNGNIFIKNLD 124
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
SID + L F+ FG I S K
Sbjct: 125 PSIDHKALHDTFSAFGNILSCK 146
>gi|13435438|gb|AAH04587.1| Pabpc1 protein [Mus musculus]
Length = 527
Score = 313 bits (802), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 153/216 (70%), Positives = 181/216 (83%), Gaps = 2/216 (0%)
Query: 122 IDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIV 181
IDNKA+YDTFSAFG+ILSCKV DE G SKGYGFVHFET+EAA ++IEK+NGMLLN + V
Sbjct: 1 IDNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKV 59
Query: 182 FVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-G 240
FVG+F RKERE ELG +AK FTNVYIKNFGED +DE+LKE+F +G S +VM ++ G
Sbjct: 60 FVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKELFGKFGPALSVKVMTDESG 119
Query: 241 KSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERL 300
KS+GFGFV++E E A+KAV NGKE++GK +YVGRAQKK ER ELKR+FE +K +R+
Sbjct: 120 KSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRI 179
Query: 301 NRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLYVKNLDD IDDERLRKEF+PFGTITSAK
Sbjct: 180 TRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAK 215
Score = 157 bits (398), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 92/232 (39%), Positives = 133/232 (57%), Gaps = 16/232 (6%)
Query: 77 TERALDTMNFDALKGRPIRI----MWSQRDPSL--RKSGVGNVFIKNLDKSIDNKAMYDT 130
ERA++ MN L R + + +R+ L R NV+IKN + +D++ + +
Sbjct: 42 AERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKEL 101
Query: 131 FSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRK 190
F FG LS KV DE G SKG+GFV FE E A K+++++NG LN K ++VG+ +
Sbjct: 102 FGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKV 161
Query: 191 EREKELGEKAKLF----------TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDG 240
ER+ EL K + N+Y+KN + +DE+L++ F P+GTITS +VM G
Sbjct: 162 ERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGG 221
Query: 241 KSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRF 292
+S+GFGFV + SPE A KAV NG+ V K LYV AQ+K ER L ++
Sbjct: 222 RSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAHLTNQY 273
>gi|432097499|gb|ELK27684.1| Polyadenylate-binding protein 4-like protein [Myotis davidii]
Length = 370
Score = 313 bits (801), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 154/265 (58%), Positives = 205/265 (77%), Gaps = 2/265 (0%)
Query: 73 YMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFS 132
++ D +RALDTMNFD ++G+ IR+MWSQRD LRKSG+GNVFIKNLDKSIDNK +Y+ FS
Sbjct: 60 HVADAQRALDTMNFDVIQGQSIRLMWSQRDAYLRKSGIGNVFIKNLDKSIDNKTLYEHFS 119
Query: 133 AFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKER 192
FG ILS KV D+QG S+GYGFVHF+ + AA+++IE++NG+LL +FVG F R++R
Sbjct: 120 VFGKILSSKVMCDDQG-SRGYGFVHFQNQAAADRAIEEMNGVLLKDFRLFVGPFKNRRDR 178
Query: 193 EKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYE 251
E EL KA FTN+YIKNFG++ +DEKLKE F YG I S +VM ++ GKS+GFGFV+++
Sbjct: 179 EAELQNKASEFTNIYIKNFGDEMDDEKLKEFFSHYGKIVSVKVMTDSSGKSKGFGFVSFD 238
Query: 252 SPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVK 311
+ E A++AV NG+E+ G+ ++VGRAQKKAER ELK+ FE K ER R +G +YVK
Sbjct: 239 THEAAKRAVDIVNGREIFGQQVFVGRAQKKAERQAELKQLFEQRKQERSWRVRGTKIYVK 298
Query: 312 NLDDSIDDERLRKEFTPFGTITSAK 336
NLD++ID+E+LRK F+ FG+I K
Sbjct: 299 NLDETIDEEKLRKAFSSFGSIIRVK 323
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 67/182 (36%), Positives = 108/182 (59%), Gaps = 16/182 (8%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
N++IKN +D++ + + FS +G I+S KV D G SKG+GFV F+T EAA ++++ V
Sbjct: 191 NIYIKNFGDEMDDEKLKEFFSHYGKIVSVKVMTDSSGKSKGFGFVSFDTHEAAKRAVDIV 250
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLF-------------TNVYIKNFGEDFNDE 218
NG + + VFVG+ + ER+ EL + LF T +Y+KN E ++E
Sbjct: 251 NGREIFGQQVFVGRAQKKAERQAELKQ---LFEQRKQERSWRVRGTKIYVKNLDETIDEE 307
Query: 219 KLKEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRA 278
KL++ F +G+I +VM +G+SRGFG + + SPE A +A+ NG+ + K + + A
Sbjct: 308 KLRKAFSSFGSIIRVKVMQEEGRSRGFGLICFSSPEEAARAMAEMNGRLLGSKPVNIALA 367
Query: 279 QK 280
Q+
Sbjct: 368 QR 369
>gi|254578926|ref|XP_002495449.1| ZYRO0B11660p [Zygosaccharomyces rouxii]
gi|238938339|emb|CAR26516.1| ZYRO0B11660p [Zygosaccharomyces rouxii]
Length = 587
Score = 313 bits (801), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 149/260 (57%), Positives = 200/260 (76%), Gaps = 2/260 (0%)
Query: 79 RALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSIL 138
+A++ +N+ +KG+P RIMWSQRDPSLRK G GN+FIKNL IDNKA++DTFS FG+IL
Sbjct: 96 QAIEKLNYTPIKGQPCRIMWSQRDPSLRKKGSGNIFIKNLHADIDNKALHDTFSVFGNIL 155
Query: 139 SCKVAQDE-QGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELG 197
SCK+A DE GNSKG+GFVHFE++EAA ++I+ +NGMLLN + V+V + RK+R+ +L
Sbjct: 156 SCKIATDEVTGNSKGFGFVHFESDEAAREAIDAINGMLLNGQEVYVAPHVSRKDRQSKLE 215
Query: 198 EKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRV-MNNDGKSRGFGFVAYESPEFA 256
E FTNVYIKN + +++ +E F+ +TS + +++GK RGFGFV YE+ A
Sbjct: 216 EAKANFTNVYIKNISLETPEQEFEEFFKKVAPVTSVHLEKDSEGKLRGFGFVNYETHAGA 275
Query: 257 EKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDS 316
KAV+ NG E G+ L+VGRAQKK ER QEL+R++E K+E++ +YQGVNL++KNLDDS
Sbjct: 276 AKAVEELNGVEFHGQQLHVGRAQKKYERQQELRRQYEQSKLEKMEKYQGVNLFIKNLDDS 335
Query: 317 IDDERLRKEFTPFGTITSAK 336
IDDERLR+EF+PFGTITS K
Sbjct: 336 IDDERLREEFSPFGTITSVK 355
Score = 130 bits (327), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 83/244 (34%), Positives = 138/244 (56%), Gaps = 20/244 (8%)
Query: 80 ALDTMNFDALKGRPIRIM--WSQRDPSLR----KSGVGNVFIKNLDKSIDNKAMYDTFSA 133
A+D +N L G+ + + S++D + K+ NV+IKN+ + + F
Sbjct: 185 AIDAINGMLLNGQEVYVAPHVSRKDRQSKLEEAKANFTNVYIKNISLETPEQEFEEFFKK 244
Query: 134 FGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKERE 193
+ S + +D +G +G+GFV++ET A K++E++NG+ + + + VG+ + ER+
Sbjct: 245 VAPVTSVHLEKDSEGKLRGFGFVNYETHAGAAKAVEELNGVEFHGQQLHVGRAQKKYERQ 304
Query: 194 KELG---EKAKL-------FTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GKS 242
+EL E++KL N++IKN + +DE+L+E F P+GTITS +VM + GKS
Sbjct: 305 QELRRQYEQSKLEKMEKYQGVNLFIKNLDDSIDDERLREEFSPFGTITSVKVMTTENGKS 364
Query: 243 RGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNR 302
+GFGFV + +PE A KA+ N + V GK LYV AQ+K R +L ++ ++ R
Sbjct: 365 KGFGFVCFSTPEEATKAITEKNQQIVAGKPLYVAIAQRKDVRRSQLAQQ---IQARNQMR 421
Query: 303 YQGV 306
YQ V
Sbjct: 422 YQQV 425
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 116/231 (50%), Gaps = 19/231 (8%)
Query: 107 KSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAAN 165
++ ++++ LD ++ +YD FS GS+ S +V +D S GY +V+F EA
Sbjct: 36 ETSTASLYVGELDPTVSEALLYDIFSPIGSVSSIRVCRDAITKTSLGYAYVNFNDYEAGR 95
Query: 166 KSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFE 225
++IEK+N + + I +R+ L +K N++IKN D +++ L + F
Sbjct: 96 QAIEKLNYTPIKGQPC----RIMWSQRDPSLRKKGS--GNIFIKNLHADIDNKALHDTFS 149
Query: 226 PYGTITSYRVMNND--GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAE 283
+G I S ++ ++ G S+GFGFV +ES E A +A+ A NG ++G+ +YV + +
Sbjct: 150 VFGNILSCKIATDEVTGNSKGFGFVHFESDEAAREAIDAINGMLLNGQEVYVAPHVSRKD 209
Query: 284 RTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITS 334
R +L+ + N+Y+KN+ ++ + F +TS
Sbjct: 210 RQSKLEEA----------KANFTNVYIKNISLETPEQEFEEFFKKVAPVTS 250
>gi|449445890|ref|XP_004140705.1| PREDICTED: polyadenylate-binding protein 2-like [Cucumis sativus]
Length = 654
Score = 312 bits (800), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 156/262 (59%), Positives = 198/262 (75%), Gaps = 3/262 (1%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D RALD +NF L G+PIR+M+S RDPS+RKSG GN+FIKNLDK+ID+KA++DTFSAFG
Sbjct: 82 DAARALDVLNFTPLNGKPIRVMYSHRDPSIRKSGAGNIFIKNLDKAIDHKALHDTFSAFG 141
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
SILSCKVA D G SKGYGFV F+ EE+A K+IEK+NGMLLN K V+VG F+ ++ER+
Sbjct: 142 SILSCKVALDSSGQSKGYGFVQFDNEESALKAIEKLNGMLLNDKQVYVGPFLRKQERDGV 201
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGKSRGFGFVAYESPE 254
+ +K+K F NV++KN E +E L + F +GT+TS VM + DGKSR FGFV +E+ +
Sbjct: 202 V-DKSK-FNNVFVKNLSETTTEEDLNKAFSEFGTLTSIVVMRDADGKSRCFGFVNFENAD 259
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A +AV NGK VD K YVG+AQKK+ER ELK RFE E ++YQG NLY+KNLD
Sbjct: 260 DAARAVDTLNGKLVDDKEWYVGKAQKKSEREVELKHRFEQTMKEAADKYQGANLYIKNLD 319
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
DSI D++L++ F PFGTITS K
Sbjct: 320 DSIGDDKLKELFAPFGTITSCK 341
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 83/208 (39%), Positives = 126/208 (60%), Gaps = 11/208 (5%)
Query: 100 QRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFE 159
+RD + KS NVF+KNL ++ + + FS FG++ S V +D G S+ +GFV+FE
Sbjct: 197 ERDGVVDKSKFNNVFVKNLSETTTEEDLNKAFSEFGTLTSIVVMRDADGKSRCFGFVNFE 256
Query: 160 TEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELG--------EKAKLF--TNVYIK 209
+ A ++++ +NG L++ K +VGK + ERE EL E A + N+YIK
Sbjct: 257 NADDAARAVDTLNGKLVDDKEWYVGKAQKKSEREVELKHRFEQTMKEAADKYQGANLYIK 316
Query: 210 NFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGKSRGFGFVAYESPEFAEKAVQAWNGKEV 268
N + D+KLKE+F P+GTITS +VM + +G SRG GFVA+ +P+ A +A+ NGK V
Sbjct: 317 NLDDSIGDDKLKELFAPFGTITSCKVMRDPNGISRGSGFVAFSTPDEASRALVEMNGKMV 376
Query: 269 DGKILYVGRAQKKAERTQELKRRFEMLK 296
K LYV AQ+K +R L+ +F ++
Sbjct: 377 VSKPLYVALAQRKEDRRARLQAQFSQIR 404
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 127/226 (56%), Gaps = 22/226 (9%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQD-EQGNSKGYGFVHFETEEAANKSIEK 170
++++ +LD ++ + +YD F+ G ++S +V +D S GYG+V++ + A ++++
Sbjct: 30 SLYVGDLDLNVTDSQLYDIFNQVGQVVSVRVCRDLTTRRSLGYGYVNYSNPQDAARALDV 89
Query: 171 VNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTI 230
+N LN K + V + R ++ G N++IKN + + + L + F +G+I
Sbjct: 90 LNFTPLNGKPIRV-MYSHRDPSIRKSGAG-----NIFIKNLDKAIDHKALHDTFSAFGSI 143
Query: 231 TSYRV-MNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL- 288
S +V +++ G+S+G+GFV +++ E A KA++ NG ++ K +YVG +K ER +
Sbjct: 144 LSCKVALDSSGQSKGYGFVQFDNEESALKAIEKLNGMLLNDKQVYVGPFLRKQERDGVVD 203
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITS 334
K +F N++VKNL ++ +E L K F+ FGT+TS
Sbjct: 204 KSKFN-------------NVFVKNLSETTTEEDLNKAFSEFGTLTS 236
>gi|255555393|ref|XP_002518733.1| polyadenylate-binding protein, putative [Ricinus communis]
gi|223542114|gb|EEF43658.1| polyadenylate-binding protein, putative [Ricinus communis]
Length = 644
Score = 312 bits (799), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 157/262 (59%), Positives = 197/262 (75%), Gaps = 3/262 (1%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D RALD +NF L G PIRIM+S RDPS+RKSG GN+FIKNLDK ID+KA++DTFSAFG
Sbjct: 77 DAARALDMLNFTPLNGSPIRIMYSHRDPSVRKSGSGNIFIKNLDKGIDHKALHDTFSAFG 136
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCKVA D G SKGYGFV F+ EE+A K+IEK+NGMLLN K V+VG F+ ++ERE
Sbjct: 137 NILSCKVATDSSGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVGPFLRKQERESA 196
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPE 254
+ +K + F NVY+KN E +E LK+ F YGTITS VM + DGK++ FGFV +E+ +
Sbjct: 197 I-DKTR-FNNVYVKNLSETTTEEDLKKAFGEYGTITSAVVMRDGDGKTKCFGFVNFENAD 254
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A AV+A NGK+ D K +VG+AQKK ER ELK RFE E +++QG NLY+KNLD
Sbjct: 255 DAATAVEALNGKKFDDKEWFVGKAQKKNERENELKVRFEQSMKEAADKFQGANLYIKNLD 314
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
DSI D+RL++ F+PFGTITS K
Sbjct: 315 DSIGDDRLKQLFSPFGTITSCK 336
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 81/208 (38%), Positives = 123/208 (59%), Gaps = 11/208 (5%)
Query: 100 QRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFE 159
+R+ ++ K+ NV++KNL ++ + + F +G+I S V +D G +K +GFV+FE
Sbjct: 192 ERESAIDKTRFNNVYVKNLSETTTEEDLKKAFGEYGTITSAVVMRDGDGKTKCFGFVNFE 251
Query: 160 TEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELG--------EKAKLF--TNVYIK 209
+ A ++E +NG + K FVGK + ERE EL E A F N+YIK
Sbjct: 252 NADDAATAVEALNGKKFDDKEWFVGKAQKKNERENELKVRFEQSMKEAADKFQGANLYIK 311
Query: 210 NFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGKSRGFGFVAYESPEFAEKAVQAWNGKEV 268
N + D++LK++F P+GTITS +VM + +G SRG GFVA+ +PE A KA+ NGK V
Sbjct: 312 NLDDSIGDDRLKQLFSPFGTITSCKVMRDPNGISRGSGFVAFSTPEEASKALMEMNGKMV 371
Query: 269 DGKILYVGRAQKKAERTQELKRRFEMLK 296
K LYV AQ+K +R L+ +F ++
Sbjct: 372 VSKPLYVALAQRKEDRRARLQAQFSQIR 399
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 127/227 (55%), Gaps = 22/227 (9%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQD-EQGNSKGYGFVHFETEEAANKSIEK 170
++++ +L+ ++ + +YD F+ G ++S +V +D S GYG+V++ + + A ++++
Sbjct: 25 SLYVGDLEANVTDSHLYDLFNQVGQVVSVRVCRDLTTRRSLGYGYVNYSSPQDAARALDM 84
Query: 171 VNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTI 230
+N LN + + + R ++ G N++IKN + + + L + F +G I
Sbjct: 85 LNFTPLNGSPIRI-MYSHRDPSVRKSGS-----GNIFIKNLDKGIDHKALHDTFSAFGNI 138
Query: 231 TSYRV-MNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL- 288
S +V ++ G+S+G+GFV +++ E A+KA++ NG ++ K +YVG +K ER +
Sbjct: 139 LSCKVATDSSGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYVGPFLRKQERESAID 198
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSA 335
K RF N+YVKNL ++ +E L+K F +GTITSA
Sbjct: 199 KTRFN-------------NVYVKNLSETTTEEDLKKAFGEYGTITSA 232
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 63/138 (45%), Gaps = 24/138 (17%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQ 261
T++Y+ + + D L ++F G + S RV + +S G+G+V Y SP+ A +A+
Sbjct: 24 TSLYVGDLEANVTDSHLYDLFNQVGQVVSVRVCRDLTTRRSLGYGYVNYSSPQDAARALD 83
Query: 262 AWNGKEVDG---KILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSID 318
N ++G +I+Y R + + N+++KNLD ID
Sbjct: 84 MLNFTPLNGSPIRIMYSHRD-------------------PSVRKSGSGNIFIKNLDKGID 124
Query: 319 DERLRKEFTPFGTITSAK 336
+ L F+ FG I S K
Sbjct: 125 HKALHDTFSAFGNILSCK 142
>gi|325182450|emb|CCA16902.1| polyadenylatebinding protein putative [Albugo laibachii Nc14]
Length = 675
Score = 311 bits (798), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 155/270 (57%), Positives = 194/270 (71%), Gaps = 12/270 (4%)
Query: 74 MLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSA 133
++D ERALDTMNF +KG P RIMWSQRDPSLRKSGVGN+F+KNLD SIDNKA+YDTFS
Sbjct: 127 LVDAERALDTMNFTCIKGVPCRIMWSQRDPSLRKSGVGNIFVKNLDPSIDNKALYDTFSL 186
Query: 134 FGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKERE 193
FG+ILSCKVA D G SKGYG+VH+ET EAA ++I K+NGML+ VFVG F R+ER
Sbjct: 187 FGNILSCKVANDPTGQSKGYGYVHYETAEAATEAINKINGMLIAGTEVFVGHFQKRQER- 245
Query: 194 KELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMN--NDGKSRGFGFVAYE 251
+ +TN Y+KN + D L+ FEP+G + S VM N +RGFGFV YE
Sbjct: 246 ----PDIEDWTNCYVKNLPTQWTDADLRREFEPFGQVNSAVVMKDPNSATNRGFGFVNYE 301
Query: 252 SPEFAEKAVQAWNGKEVDGKI-----LYVGRAQKKAERTQELKRRFEMLKIERLNRYQGV 306
+ A AV+ +GK G LYVG+AQK+ ER +EL+++F+ LK+ER+N+YQGV
Sbjct: 302 DADGAHAAVEGLSGKTFKGVNGVDLELYVGKAQKRTERERELRQKFDQLKLERINKYQGV 361
Query: 307 NLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
NLYVKNLDD + DE LR+ FT +GTITSA+
Sbjct: 362 NLYVKNLDDLLQDEELREAFTNYGTITSAR 391
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/198 (37%), Positives = 108/198 (54%), Gaps = 23/198 (11%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQ-GNSKGYGFVHFETEEAANKSIEK 170
N ++KNL + + F FG + S V +D ++G+GFV++E + A+ ++E
Sbjct: 253 NCYVKNLPTQWTDADLRREFEPFGQVNSAVVMKDPNSATNRGFGFVNYEDADGAHAAVEG 312
Query: 171 --------VNGMLLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFG 212
VNG+ L ++VGK R ERE+EL +K N+Y+KN
Sbjct: 313 LSGKTFKGVNGVDLE---LYVGKAQKRTERERELRQKFDQLKLERINKYQGVNLYVKNLD 369
Query: 213 EDFNDEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGK 271
+ DE+L+E F YGTITS RVM ++ G SRGFGFV + +PE A AV NGK + GK
Sbjct: 370 DLLQDEELREAFTNYGTITSARVMRDSTGNSRGFGFVCFSTPEEAATAVAEMNGKLITGK 429
Query: 272 ILYVGRAQKKAERTQELK 289
+YV AQ+K R +L+
Sbjct: 430 PVYVAFAQRKEVRRAQLE 447
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 61/136 (44%), Gaps = 20/136 (14%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQ 261
++Y+ + D + L E+F G + S RV + +S G+ +V + + AE+A+
Sbjct: 76 ASLYVGDIHPDVTEALLFEIFNAVGPVASIRVCRDAVTRRSLGYAYVNFHNLVDAERALD 135
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGV-NLYVKNLDDSIDDE 320
N + G + +Q+ R GV N++VKNLD SID++
Sbjct: 136 TMNFTCIKGVPCRIMWSQRDPSL-----------------RKSGVGNIFVKNLDPSIDNK 178
Query: 321 RLRKEFTPFGTITSAK 336
L F+ FG I S K
Sbjct: 179 ALYDTFSLFGNILSCK 194
>gi|255731137|ref|XP_002550493.1| polyadenylate-binding protein [Candida tropicalis MYA-3404]
gi|240132450|gb|EER32008.1| polyadenylate-binding protein [Candida tropicalis MYA-3404]
Length = 633
Score = 311 bits (798), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 156/262 (59%), Positives = 204/262 (77%), Gaps = 1/262 (0%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D E+A++ +N+ ++GRP RIMWSQRDPS R+SG GN+FIKNL +IDNKA++DTFSAFG
Sbjct: 102 DGEKAIEELNYTPIEGRPCRIMWSQRDPSARRSGDGNIFIKNLHPAIDNKALHDTFSAFG 161
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
ILSCKVA DE G SK +GFVH+ET EAA +IE VNGMLLN + VFVGK I +K+RE +
Sbjct: 162 KILSCKVATDELGQSKCFGFVHYETAEAAEAAIENVNGMLLNDREVFVGKHISKKDRESK 221
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITS-YRVMNNDGKSRGFGFVAYESPE 254
E FTN+Y+KN + +E+ +++F PYG ITS Y + DGKS+GFGFV +E +
Sbjct: 222 FEEMKANFTNIYVKNIDLAYTEEEFEKLFAPYGKITSIYLEKDQDGKSKGFGFVNFEEHD 281
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A KAV+ N KE++G+ +YVGRAQKK ER +ELK+++E +++E+L +YQGVNL+VKNLD
Sbjct: 282 AAVKAVEELNDKEINGQKIYVGRAQKKRERMEELKKQYEAIRLEKLAKYQGVNLFVKNLD 341
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
DSID E+L +EF PFGTITSAK
Sbjct: 342 DSIDSEKLEEEFKPFGTITSAK 363
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 72/198 (36%), Positives = 124/198 (62%), Gaps = 11/198 (5%)
Query: 107 KSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANK 166
K+ N+++KN+D + + F+ +G I S + +D+ G SKG+GFV+FE +AA K
Sbjct: 226 KANFTNIYVKNIDLAYTEEEFEKLFAPYGKITSIYLEKDQDGKSKGFGFVNFEEHDAAVK 285
Query: 167 SIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFN 216
++E++N +N + ++VG+ ++ER +EL ++ + N+++KN + +
Sbjct: 286 AVEELNDKEINGQKIYVGRAQKKRERMEELKKQYEAIRLEKLAKYQGVNLFVKNLDDSID 345
Query: 217 DEKLKEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYV 275
EKL+E F+P+GTITS +VM +D GKS+GFGFV + +PE A KA+ N + V+ K LYV
Sbjct: 346 SEKLEEEFKPFGTITSAKVMVDDAGKSKGFGFVCFTTPEEATKAITEMNQRMVNNKPLYV 405
Query: 276 GRAQKKAERTQELKRRFE 293
AQ+K R +L+++ +
Sbjct: 406 ALAQRKDVRRSQLEQQIQ 423
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 61/135 (45%), Gaps = 18/135 (13%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQ 261
++Y+ N+ L E+F P G ++S RV + KS G+ +V Y E EKA++
Sbjct: 49 ASLYVGELNPSVNEATLFEIFSPIGQVSSIRVCRDAVSKKSLGYAYVNYHKFEDGEKAIE 108
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDER 321
N ++G+ + +Q+ R N+++KNL +ID++
Sbjct: 109 ELNYTPIEGRPCRIMWSQRDPS----------------ARRSGDGNIFIKNLHPAIDNKA 152
Query: 322 LRKEFTPFGTITSAK 336
L F+ FG I S K
Sbjct: 153 LHDTFSAFGKILSCK 167
>gi|297274127|ref|XP_002800732.1| PREDICTED: polyadenylate-binding protein 1 [Macaca mulatta]
Length = 605
Score = 311 bits (797), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 160/262 (61%), Positives = 189/262 (72%), Gaps = 34/262 (12%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D ERALDTMNFD +KG+P+RIMWSQRDPSLR+SGV
Sbjct: 64 DAERALDTMNFDVIKGKPVRIMWSQRDPSLRRSGV------------------------- 98
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
C DE G SKGYGFVHFET EAA ++IEK+NG LLN + VFVG+F RKERE E
Sbjct: 99 ---VC----DENG-SKGYGFVHFETHEAAERAIEKMNGTLLNDRKVFVGRFKSRKEREAE 150
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPE 254
LG KAK F NVYIKNFGED +DE+LK++F +G S +VM ++ GKS+GFGFV++E E
Sbjct: 151 LGAKAKEFPNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHE 210
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A+KAV NGKE++GK +YVGRAQKK ER ELKR+FE +K +R+ RYQ VNLYVKNLD
Sbjct: 211 DAQKAVDEMNGKELNGKHIYVGRAQKKVERQTELKRKFEQMKQDRITRYQVVNLYVKNLD 270
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
D IDDERLRK F+PFGTITSAK
Sbjct: 271 DDIDDERLRKAFSPFGTITSAK 292
Score = 165 bits (417), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 103/275 (37%), Positives = 148/275 (53%), Gaps = 31/275 (11%)
Query: 41 LIDGNTVKYDWD--------SGYTCHQLGS---GAILVQLGQPYMLDTERALDTMNFDAL 89
+I G V+ W SG C + GS G + + + ERA++ MN L
Sbjct: 76 VIKGKPVRIMWSQRDPSLRRSGVVCDENGSKGYGFVHFETHE----AAERAIEKMNGTLL 131
Query: 90 KGRPIRI----MWSQRDPSL--RKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVA 143
R + + +R+ L + NV+IKN + +D++ + D F FG LS KV
Sbjct: 132 NDRKVFVGRFKSRKEREAELGAKAKEFPNVYIKNFGEDMDDERLKDLFGKFGPALSVKVM 191
Query: 144 QDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLF 203
DE G SKG+GFV FE E A K+++++NG LN K ++VG+ + ER+ EL K +
Sbjct: 192 TDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKHIYVGRAQKKVERQTELKRKFEQM 251
Query: 204 ----------TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDGKSRGFGFVAYESP 253
N+Y+KN +D +DE+L++ F P+GTITS +VM G+S+GFGFV + SP
Sbjct: 252 KQDRITRYQVVNLYVKNLDDDIDDERLRKAFSPFGTITSAKVMMEGGRSKGFGFVCFSSP 311
Query: 254 EFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
E A KAV NG+ V K LYV AQ+K ER L
Sbjct: 312 EEATKAVTEMNGRIVATKPLYVALAQRKEERQAHL 346
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 105/236 (44%), Gaps = 49/236 (20%)
Query: 102 DPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFET 160
+PS ++++ +L + +Y+ FS G ILS +V +D S Y +V+F+
Sbjct: 2 NPSTPSYPTASLYVGDLHPDVTEAMLYEKFSRAGPILSIRVCRDVITRRSSSYAYVNFQH 61
Query: 161 EEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKL 220
+ A ++++ +N ++ K V + +R+ L
Sbjct: 62 PKDAERALDTMNFDVIKGKPVRIM----WSQRDPSLRRSG-------------------- 97
Query: 221 KEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
V+ ++ S+G+GFV +E+ E AE+A++ NG ++ + ++VGR +
Sbjct: 98 --------------VVCDENGSKGYGFVHFETHEAAERAIEKMNGTLLNDRKVFVGRFKS 143
Query: 281 KAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ ER EL + + N+Y+KN + +DDERL+ F FG S K
Sbjct: 144 RKEREAELGAKAKEFP----------NVYIKNFGEDMDDERLKDLFGKFGPALSVK 189
>gi|68468953|ref|XP_721535.1| hypothetical protein CaO19.3037 [Candida albicans SC5314]
gi|68469502|ref|XP_721264.1| hypothetical protein CaO19.10555 [Candida albicans SC5314]
gi|74680286|sp|Q5AI15.1|PABP_CANAL RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|46443173|gb|EAL02457.1| hypothetical protein CaO19.10555 [Candida albicans SC5314]
gi|46443455|gb|EAL02737.1| hypothetical protein CaO19.3037 [Candida albicans SC5314]
gi|238879187|gb|EEQ42825.1| polyadenylate-binding protein [Candida albicans WO-1]
Length = 629
Score = 311 bits (796), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 155/262 (59%), Positives = 206/262 (78%), Gaps = 1/262 (0%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D E+A++ +N++ ++GRP RIMWSQRDPS R+SG GN+FIKNL +IDNKA++DTFSAFG
Sbjct: 105 DGEKAIEELNYNPIEGRPCRIMWSQRDPSARRSGDGNIFIKNLHPAIDNKALHDTFSAFG 164
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
ILSCKVA DE G SK +GFVH+ET EAA +IE VNGMLLN + VFVGK I +K+RE +
Sbjct: 165 KILSCKVATDEFGQSKCFGFVHYETAEAAEAAIENVNGMLLNDREVFVGKHISKKDRESK 224
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITS-YRVMNNDGKSRGFGFVAYESPE 254
E FTN+Y+KN ++++E +++F P+G ITS Y + DGKS+GFGFV +E E
Sbjct: 225 FEEMKANFTNIYVKNIDLNYSEESFEKLFSPFGKITSIYLEKDQDGKSKGFGFVNFEDHE 284
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A KAV+ N KE++G+ +YVGRAQKK ER +ELK+++E +++E+L +YQGVNL+VKNLD
Sbjct: 285 SAVKAVEELNDKEINGQKIYVGRAQKKRERLEELKKQYEAVRLEKLAKYQGVNLFVKNLD 344
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
D+ID E+L +EF PFGTITSAK
Sbjct: 345 DTIDSEKLEEEFKPFGTITSAK 366
Score = 137 bits (345), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 73/198 (36%), Positives = 126/198 (63%), Gaps = 11/198 (5%)
Query: 107 KSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANK 166
K+ N+++KN+D + ++ FS FG I S + +D+ G SKG+GFV+FE E+A K
Sbjct: 229 KANFTNIYVKNIDLNYSEESFEKLFSPFGKITSIYLEKDQDGKSKGFGFVNFEDHESAVK 288
Query: 167 SIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFN 216
++E++N +N + ++VG+ ++ER +EL ++ + N+++KN + +
Sbjct: 289 AVEELNDKEINGQKIYVGRAQKKRERLEELKKQYEAVRLEKLAKYQGVNLFVKNLDDTID 348
Query: 217 DEKLKEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYV 275
EKL+E F+P+GTITS +VM ++ GKS+GFGFV + +PE A KA+ N + ++GK LYV
Sbjct: 349 SEKLEEEFKPFGTITSAKVMVDEAGKSKGFGFVCFTTPEEATKAITEMNTRMINGKPLYV 408
Query: 276 GRAQKKAERTQELKRRFE 293
AQ+K R +L+++ +
Sbjct: 409 ALAQRKDVRRSQLEQQIQ 426
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 67/148 (45%), Gaps = 21/148 (14%)
Query: 194 KELGEKAKLFTN---VYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFV 248
+E GE + + N +Y+ N+ L E+F P G ++S RV + KS G+ +V
Sbjct: 39 EEQGESSGVAENSASLYVGELNPSVNEATLFEIFSPIGQVSSIRVCRDAVSKKSLGYAYV 98
Query: 249 AYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNL 308
Y E EKA++ N ++G+ + +Q+ R N+
Sbjct: 99 NYHKYEDGEKAIEELNYNPIEGRPCRIMWSQRDPS----------------ARRSGDGNI 142
Query: 309 YVKNLDDSIDDERLRKEFTPFGTITSAK 336
++KNL +ID++ L F+ FG I S K
Sbjct: 143 FIKNLHPAIDNKALHDTFSAFGKILSCK 170
>gi|168229272|ref|NP_001094949.1| poly(A) binding protein, cytoplasmic 4-like [Mus musculus]
gi|148703238|gb|EDL35185.1| mCG12357 [Mus musculus]
Length = 370
Score = 310 bits (795), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 151/262 (57%), Positives = 198/262 (75%), Gaps = 2/262 (0%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D ++AL TMNFD +KG+ IR+MWSQRD LR+SGVGNVFIKNLDKSIDNK +Y+ FS FG
Sbjct: 63 DAQKALVTMNFDVIKGKSIRLMWSQRDACLRRSGVGNVFIKNLDKSIDNKTLYEHFSPFG 122
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+I+S KV D +G SKGYGFVH++ AA+++IE++NG LL +FV +F RK+RE E
Sbjct: 123 TIMSSKVMTDGEG-SKGYGFVHYQDRRAADRAIEEMNGKLLRESTLFVARFKSRKDREAE 181
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGKSRGFGFVAYESPE 254
L +K FTNVYIKNFG+D +DEKL+E+F YG S +VM + GKS+GFGFV+++S E
Sbjct: 182 LRDKPTEFTNVYIKNFGDDVDDEKLREVFSKYGQTLSVKVMKDATGKSKGFGFVSFDSHE 241
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A+ AV+ NG++++G+ ++VGRAQKK ER ELK FE +K ER+ Q LY+KNLD
Sbjct: 242 AAKNAVEDMNGQDINGQTIFVGRAQKKVERQAELKEMFEQMKKERIRARQAAKLYIKNLD 301
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
D+IDDE LRKEF+ FG+I K
Sbjct: 302 DTIDDETLRKEFSVFGSICRVK 323
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/220 (34%), Positives = 121/220 (55%), Gaps = 16/220 (7%)
Query: 77 TERALDTMNFDALKGRPIRIMW----SQRDPSLRK--SGVGNVFIKNLDKSIDNKAMYDT 130
+RA++ MN L+ + + R+ LR + NV+IKN +D++ + +
Sbjct: 150 ADRAIEEMNGKLLRESTLFVARFKSRKDREAELRDKPTEFTNVYIKNFGDDVDDEKLREV 209
Query: 131 FSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRK 190
FS +G LS KV +D G SKG+GFV F++ EAA ++E +NG +N + +FVG+ +
Sbjct: 210 FSKYGQTLSVKVMKDATGKSKGFGFVSFDSHEAAKNAVEDMNGQDINGQTIFVGRAQKKV 269
Query: 191 EREKELGE----------KAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDG 240
ER+ EL E +A+ +YIKN + +DE L++ F +G+I +VM G
Sbjct: 270 ERQAELKEMFEQMKKERIRARQAAKLYIKNLDDTIDDETLRKEFSVFGSICRVKVMQEAG 329
Query: 241 KSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
+S+GFG + + SPE A KA+ NG+ + K L + QK
Sbjct: 330 QSKGFGLICFFSPEAAAKAMAEMNGRILGSKPLNIALGQK 369
>gi|126137970|ref|XP_001385508.1| Polyadenylate-binding protein, cytoplasmic and nuclear
(Poly(A)-binding protein) (PABP) (ARS consensus binding
protein ACBP-67) (Polyadenylate tail-binding protein)
[Scheffersomyces stipitis CBS 6054]
gi|158513407|sp|A3LXL0.1|PABP_PICST RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|126092786|gb|ABN67479.1| Polyadenylate-binding protein, cytoplasmic and nuclear
(Poly(A)-binding protein) (PABP) (ARS consensus binding
protein ACBP-67) (Polyadenylate tail-binding protein)
[Scheffersomyces stipitis CBS 6054]
Length = 632
Score = 310 bits (794), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 155/264 (58%), Positives = 206/264 (78%), Gaps = 1/264 (0%)
Query: 74 MLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSA 133
M D E+A++ +N+ ++GRP RIMWSQRDPS R+SG GN+FIKNL +IDNKA++DTFS
Sbjct: 103 MEDGEKAIEELNYSPIEGRPCRIMWSQRDPSARRSGDGNIFIKNLHPAIDNKALHDTFST 162
Query: 134 FGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKERE 193
FG ILSCKVA D+ G SK +GFVH+ET EAA +IE VNGMLLN + VFVGK I +K+RE
Sbjct: 163 FGKILSCKVATDDMGQSKCFGFVHYETAEAAEAAIENVNGMLLNDREVFVGKHISKKDRE 222
Query: 194 KELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITS-YRVMNNDGKSRGFGFVAYES 252
+ E FTN+Y+KN ++++E LK++F PYG ITS Y + +GKS+GFGFV YE
Sbjct: 223 SKFEEIKANFTNIYVKNIDLEYSEEDLKKLFTPYGAITSIYLEKDAEGKSKGFGFVNYEG 282
Query: 253 PEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKN 312
E A KAV+ N KE++G+ +YVGRAQKK ER +ELK+++E ++E+L++YQGVNL++KN
Sbjct: 283 HEAAVKAVEELNDKEINGQKIYVGRAQKKRERMEELKKQYENTRLEKLSKYQGVNLFIKN 342
Query: 313 LDDSIDDERLRKEFTPFGTITSAK 336
LDD+ID E+L +EF PFGTITSA+
Sbjct: 343 LDDTIDSEKLEEEFKPFGTITSAR 366
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 76/198 (38%), Positives = 124/198 (62%), Gaps = 11/198 (5%)
Query: 107 KSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANK 166
K+ N+++KN+D + + F+ +G+I S + +D +G SKG+GFV++E EAA K
Sbjct: 229 KANFTNIYVKNIDLEYSEEDLKKLFTPYGAITSIYLEKDAEGKSKGFGFVNYEGHEAAVK 288
Query: 167 SIEKVNGMLLNSKIVFVGKFIPRKEREKELG--------EKAKLF--TNVYIKNFGEDFN 216
++E++N +N + ++VG+ ++ER +EL EK + N++IKN + +
Sbjct: 289 AVEELNDKEINGQKIYVGRAQKKRERMEELKKQYENTRLEKLSKYQGVNLFIKNLDDTID 348
Query: 217 DEKLKEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYV 275
EKL+E F+P+GTITS RVM ++ GKS+GFGFV + SPE A KA+ N + GK LYV
Sbjct: 349 SEKLEEEFKPFGTITSARVMVDETGKSKGFGFVCFSSPEEATKAITEMNQRMFFGKPLYV 408
Query: 276 GRAQKKAERTQELKRRFE 293
AQ+K R +L+++ +
Sbjct: 409 ALAQRKDVRRSQLEQQIQ 426
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 63/139 (45%), Gaps = 18/139 (12%)
Query: 200 AKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAE 257
A+ ++Y+ N+ L E+F P G ++S RV + KS G+ +V Y E E
Sbjct: 48 AESTASLYVGELNTSVNEATLFEIFSPIGQVSSIRVCRDAVSKKSLGYAYVNYHKMEDGE 107
Query: 258 KAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSI 317
KA++ N ++G+ + +Q+ R N+++KNL +I
Sbjct: 108 KAIEELNYSPIEGRPCRIMWSQRDPS----------------ARRSGDGNIFIKNLHPAI 151
Query: 318 DDERLRKEFTPFGTITSAK 336
D++ L F+ FG I S K
Sbjct: 152 DNKALHDTFSTFGKILSCK 170
>gi|348582138|ref|XP_003476833.1| PREDICTED: LOW QUALITY PROTEIN: polyadenylate-binding protein
4-like [Cavia porcellus]
Length = 482
Score = 310 bits (794), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 147/262 (56%), Positives = 203/262 (77%), Gaps = 2/262 (0%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D ++ALDTMNFDA++G+PIR+MWSQRD LRKSGVGNV IKNLD+S+DNK +Y+ FS FG
Sbjct: 175 DAQKALDTMNFDAVEGKPIRLMWSQRDACLRKSGVGNVIIKNLDRSVDNKTLYEHFSGFG 234
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
ILS KV D+QG SKGY FVHF+++ AA+ +I+++NG ++ + V V F R++RE E
Sbjct: 235 RILSSKVMSDDQG-SKGYAFVHFQSQSAADCAIQEMNGKVIRDRQVLVAPFRSRRDREAE 293
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPE 254
L + FTNVY+KNFGED +DE+L+ +F YG S +VM ++ GKS+GFGFV+++S E
Sbjct: 294 LRTRTSEFTNVYVKNFGEDMDDERLQGVFSKYGRTLSVKVMTDSSGKSKGFGFVSFDSHE 353
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A+KAV+ NGK+++G++++VGRAQKK ER ELK+ FE LK + R QGV LY+KNLD
Sbjct: 354 AAKKAVEEMNGKDINGQLVFVGRAQKKEERQAELKQVFEELKRDGARRCQGVKLYIKNLD 413
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
D++DD+RLR+ F+ FG+I+ K
Sbjct: 414 DTVDDDRLRRAFSSFGSISRVK 435
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 74/218 (33%), Positives = 124/218 (56%), Gaps = 16/218 (7%)
Query: 80 ALDTMNFDALKGRPIRI--MWSQRDPS----LRKSGVGNVFIKNLDKSIDNKAMYDTFSA 133
A+ MN ++ R + + S+RD R S NV++KN + +D++ + FS
Sbjct: 265 AIQEMNGKVIRDRQVLVAPFRSRRDREAELRTRTSEFTNVYVKNFGEDMDDERLQGVFSK 324
Query: 134 FGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKERE 193
+G LS KV D G SKG+GFV F++ EAA K++E++NG +N ++VFVG+ ++ER+
Sbjct: 325 YGRTLSVKVMTDSSGKSKGFGFVSFDSHEAAKKAVEEMNGKDINGQLVFVGRAQKKEERQ 384
Query: 194 KEL----------GEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDGKSR 243
EL G + +YIKN + +D++L+ F +G+I+ +VM +G+ +
Sbjct: 385 AELKQVFEELKRDGARRCQGVKLYIKNLDDTVDDDRLRRAFSSFGSISRVKVMEEEGQRK 444
Query: 244 GFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKK 281
GFG V + SPE A KA+ NG+ + K L + A+++
Sbjct: 445 GFGLVCFSSPEEAAKAMTQMNGRVLGSKPLNIALAKRQ 482
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 64/137 (46%), Gaps = 20/137 (14%)
Query: 203 FTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDGKSR--GFGFVAYESPEFAEKAV 260
++Y+ + D ++ L F G + S R+ + R G+ +V + P A+KA+
Sbjct: 121 LASLYVGDLHADATEDLLFRKFSXAGPVLSIRICRDVATRRPLGYAYVNFLRPADAQKAL 180
Query: 261 QAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGV-NLYVKNLDDSIDD 319
N V+GK + + +Q+ A R GV N+ +KNLD S+D+
Sbjct: 181 DTMNFDAVEGKPIRLMWSQRDA-----------------CLRKSGVGNVIIKNLDRSVDN 223
Query: 320 ERLRKEFTPFGTITSAK 336
+ L + F+ FG I S+K
Sbjct: 224 KTLYEHFSGFGRILSSK 240
>gi|224060514|ref|XP_002300227.1| predicted protein [Populus trichocarpa]
gi|222847485|gb|EEE85032.1| predicted protein [Populus trichocarpa]
Length = 644
Score = 310 bits (794), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 154/262 (58%), Positives = 200/262 (76%), Gaps = 3/262 (1%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D RAL+ +NF L G PIR+M+S RDP++RKSG GN+FIKNLDK+ID+KA++DTFSAFG
Sbjct: 78 DAARALEMLNFTPLNGSPIRVMYSHRDPTIRKSGAGNIFIKNLDKAIDHKALHDTFSAFG 137
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCKVA D G SKGYGFV F++EEAA K+IEK+NGMLLN K V+VG F+ ++ER+
Sbjct: 138 NILSCKVATDPSGQSKGYGFVQFDSEEAAQKAIEKLNGMLLNDKQVYVGPFLRKQERDTA 197
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPE 254
+K + F NV++KN E +E L + F +GTITS VM + DGKS+ FGFV +E+ E
Sbjct: 198 T-DKMR-FNNVFVKNLSETTTEEDLNKTFGEFGTITSIVVMRDGDGKSKCFGFVNFENAE 255
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A KAV+A NGK++D K +VG+AQKK ER ELK+RFE E +++QG NLY+KNLD
Sbjct: 256 DAAKAVEALNGKKIDDKEWFVGKAQKKYEREVELKQRFEQSMKEAADKFQGANLYIKNLD 315
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
DSI DE+L++ F+PFGTITS K
Sbjct: 316 DSIGDEKLKELFSPFGTITSCK 337
Score = 150 bits (378), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 90/208 (43%), Positives = 124/208 (59%), Gaps = 11/208 (5%)
Query: 100 QRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFE 159
+RD + K NVF+KNL ++ + + TF FG+I S V +D G SK +GFV+FE
Sbjct: 193 ERDTATDKMRFNNVFVKNLSETTTEEDLNKTFGEFGTITSIVVMRDGDGKSKCFGFVNFE 252
Query: 160 TEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELG--------EKAKLF--TNVYIK 209
E A K++E +NG ++ K FVGK + ERE EL E A F N+YIK
Sbjct: 253 NAEDAAKAVEALNGKKIDDKEWFVGKAQKKYEREVELKQRFEQSMKEAADKFQGANLYIK 312
Query: 210 NFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGKSRGFGFVAYESPEFAEKAVQAWNGKEV 268
N + DEKLKE+F P+GTITS +VM + +G SRG GFVA+ +PE A +A+ NGK V
Sbjct: 313 NLDDSIGDEKLKELFSPFGTITSCKVMRDPNGISRGSGFVAFSTPEEASRALLEMNGKIV 372
Query: 269 DGKILYVGRAQKKAERTQELKRRFEMLK 296
K LYV AQ+K +R L+ +F ++
Sbjct: 373 VSKPLYVALAQRKEDRRARLQAQFSQMR 400
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 71/226 (31%), Positives = 123/226 (54%), Gaps = 22/226 (9%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQD-EQGNSKGYGFVHFETEEAANKSIEK 170
++++ +L+ S+ + +YD F+ G ++S +V +D S GYG+V++ + A +++E
Sbjct: 26 SLYVGDLEASVTDSQLYDLFNQVGQVVSVRVCRDLTSRRSLGYGYVNYSNPQDAARALEM 85
Query: 171 VNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTI 230
+N LN + V + R ++ G N++IKN + + + L + F +G I
Sbjct: 86 LNFTPLNGSPIRV-MYSHRDPTIRKSGA-----GNIFIKNLDKAIDHKALHDTFSAFGNI 139
Query: 231 TSYRVMNN-DGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAER-TQEL 288
S +V + G+S+G+GFV ++S E A+KA++ NG ++ K +YVG +K ER T
Sbjct: 140 LSCKVATDPSGQSKGYGFVQFDSEEAAQKAIEKLNGMLLNDKQVYVGPFLRKQERDTATD 199
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITS 334
K RF N++VKNL ++ +E L K F FGTITS
Sbjct: 200 KMRFN-------------NVFVKNLSETTTEEDLNKTFGEFGTITS 232
>gi|7673355|gb|AAF66823.1|AF190655_1 poly(A)-binding protein [Nicotiana tabacum]
Length = 649
Score = 310 bits (794), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 157/286 (54%), Positives = 209/286 (73%), Gaps = 9/286 (3%)
Query: 56 TCHQLGS----GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVG 111
C L S G V G P D RAL+ +NF L G+PIRIM+S RDP++R+SG G
Sbjct: 58 VCRDLTSQRSLGYGYVNYGNPQ--DAARALEVLNFTPLHGKPIRIMYSNRDPTIRRSGNG 115
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
N+FIKNLDK+ID+KA++DTFSAFG+ILSCKVA D G SKGYGFV +++EEAA K+IEK+
Sbjct: 116 NIFIKNLDKAIDHKALHDTFSAFGNILSCKVAVDSSGQSKGYGFVQYDSEEAAQKAIEKL 175
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTIT 231
NGMLLN K V+VG F+ ++ E+++ FTNV++KN E +E+L+++F +G IT
Sbjct: 176 NGMLLNDKQVYVGPFV--RKHERDMAVDKTRFTNVFVKNLSESTLEEELRKIFGEFGAIT 233
Query: 232 SYRVMNN-DGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKR 290
S VM + DGKSR FGFV +E+ E A +AV+A NG ++D K +VGRAQKK+ER ELK
Sbjct: 234 SVAVMKDEDGKSRCFGFVNFENAEDAARAVEALNGYKLDNKDWFVGRAQKKSEREMELKH 293
Query: 291 RFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RFE E +++ QG+NLY+KNLDDSI DE+L++ F+P+GTITS K
Sbjct: 294 RFEQSAKEAVDKSQGLNLYIKNLDDSISDEKLKELFSPYGTITSCK 339
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 87/208 (41%), Positives = 126/208 (60%), Gaps = 11/208 (5%)
Query: 100 QRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFE 159
+RD ++ K+ NVF+KNL +S + + F FG+I S V +DE G S+ +GFV+FE
Sbjct: 195 ERDMAVDKTRFTNVFVKNLSESTLEEELRKIFGEFGAITSVAVMKDEDGKSRCFGFVNFE 254
Query: 160 TEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFT----------NVYIK 209
E A +++E +NG L++K FVG+ + ERE EL + + N+YIK
Sbjct: 255 NAEDAARAVEALNGYKLDNKDWFVGRAQKKSEREMELKHRFEQSAKEAVDKSQGLNLYIK 314
Query: 210 NFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGKSRGFGFVAYESPEFAEKAVQAWNGKEV 268
N + +DEKLKE+F PYGTITS +VM + G S+G GFVA+ +PE A +A+ NGK V
Sbjct: 315 NLDDSISDEKLKELFSPYGTITSCKVMRDPSGVSKGSGFVAFSNPEEASRALSEMNGKMV 374
Query: 269 DGKILYVGRAQKKAERTQELKRRFEMLK 296
K LYV AQ+K ER L+ +F ++
Sbjct: 375 VSKPLYVALAQRKEERRARLQAQFSQMR 402
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 72/228 (31%), Positives = 126/228 (55%), Gaps = 22/228 (9%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQD-EQGNSKGYGFVHFETEEAANKSI 168
V ++++ +LD ++ + +YD F+ G ++S +V +D S GYG+V++ + A +++
Sbjct: 26 VTSLYVGDLDVNVTDSQLYDLFNQLGQVVSVRVCRDLTSQRSLGYGYVNYGNPQDAARAL 85
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
E +N L+ K + + + R + G N++IKN + + + L + F +G
Sbjct: 86 EVLNFTPLHGKPIRI-MYSNRDPTIRRSGN-----GNIFIKNLDKAIDHKALHDTFSAFG 139
Query: 229 TITSYRV-MNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQE 287
I S +V +++ G+S+G+GFV Y+S E A+KA++ NG ++ K +YVG +K ER
Sbjct: 140 NILSCKVAVDSSGQSKGYGFVQYDSEEAAQKAIEKLNGMLLNDKQVYVGPFVRKHERDMA 199
Query: 288 L-KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITS 334
+ K RF N++VKNL +S +E LRK F FG ITS
Sbjct: 200 VDKTRF-------------TNVFVKNLSESTLEEELRKIFGEFGAITS 234
>gi|448519634|ref|XP_003868121.1| poly(A)-binding protein [Candida orthopsilosis Co 90-125]
gi|380352460|emb|CCG22686.1| poly(A)-binding protein [Candida orthopsilosis]
Length = 638
Score = 310 bits (794), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 153/262 (58%), Positives = 207/262 (79%), Gaps = 1/262 (0%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D E+A+D +N+ ++ RP RIMWSQRDPS R+SG GN+FIKNL +IDNKA++DTFSAFG
Sbjct: 114 DGEKAIDELNYSLIENRPCRIMWSQRDPSARRSGDGNIFIKNLHPAIDNKALHDTFSAFG 173
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
ILSCKVA D+ G SK +GFVH+ET EAA +IE VNGMLLN + V+VGK + +K+RE +
Sbjct: 174 RILSCKVATDDLGQSKCFGFVHYETAEAAEAAIENVNGMLLNDREVYVGKHVSKKDRESK 233
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITS-YRVMNNDGKSRGFGFVAYESPE 254
E +TN+Y+KN +F++++ +++F PYG ITS Y + DGKS+GFGFV YE +
Sbjct: 234 FEEMKANYTNIYVKNIDLEFSEKEFEDLFAPYGKITSIYLEKDQDGKSKGFGFVNYEEHK 293
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A +AV+A N KE++G+ +YVGRAQKK ERT+ELK+++E +++E+L++YQGVNL+VKNLD
Sbjct: 294 SAVEAVEALNDKEINGQKIYVGRAQKKRERTEELKKQYEAIRLEKLSKYQGVNLFVKNLD 353
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
D ID E+L +EF PFGTITSAK
Sbjct: 354 DQIDSEKLEEEFKPFGTITSAK 375
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 73/198 (36%), Positives = 124/198 (62%), Gaps = 11/198 (5%)
Query: 107 KSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANK 166
K+ N+++KN+D K D F+ +G I S + +D+ G SKG+GFV++E ++A +
Sbjct: 238 KANYTNIYVKNIDLEFSEKEFEDLFAPYGKITSIYLEKDQDGKSKGFGFVNYEEHKSAVE 297
Query: 167 SIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFN 216
++E +N +N + ++VG+ ++ER +EL ++ + N+++KN + +
Sbjct: 298 AVEALNDKEINGQKIYVGRAQKKRERTEELKKQYEAIRLEKLSKYQGVNLFVKNLDDQID 357
Query: 217 DEKLKEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYV 275
EKL+E F+P+GTITS +VM +D GKSRGFGFV + +PE A KA+ N + V+GK LYV
Sbjct: 358 SEKLEEEFKPFGTITSAKVMVDDAGKSRGFGFVCFSTPEEATKAITEMNQRMVNGKPLYV 417
Query: 276 GRAQKKAERTQELKRRFE 293
AQ+K R +L+++ +
Sbjct: 418 ALAQRKDVRRSQLEQQIQ 435
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 66/148 (44%), Gaps = 18/148 (12%)
Query: 191 EREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFV 248
E + ELG A+ ++Y+ N+ L E+F P G ++S RV + KS G+ +V
Sbjct: 48 EEQGELGGVAENSASLYVGELNPSVNEATLFEIFSPIGQVSSIRVCRDAVSKKSLGYAYV 107
Query: 249 AYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNL 308
Y E EKA+ N ++ + + +Q+ R N+
Sbjct: 108 NYHKFEDGEKAIDELNYSLIENRPCRIMWSQRDPS----------------ARRSGDGNI 151
Query: 309 YVKNLDDSIDDERLRKEFTPFGTITSAK 336
++KNL +ID++ L F+ FG I S K
Sbjct: 152 FIKNLHPAIDNKALHDTFSAFGRILSCK 179
>gi|367008356|ref|XP_003678678.1| hypothetical protein TDEL_0A01350 [Torulaspora delbrueckii]
gi|359746335|emb|CCE89467.1| hypothetical protein TDEL_0A01350 [Torulaspora delbrueckii]
Length = 588
Score = 310 bits (794), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 145/258 (56%), Positives = 195/258 (75%), Gaps = 1/258 (0%)
Query: 80 ALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILS 139
A++ +N+ +KG P RIMWSQRDPS+RK G GN+FIKNL IDNKA++DTFS FG+ILS
Sbjct: 99 AIEKLNYAPIKGVPCRIMWSQRDPSMRKKGSGNIFIKNLHPDIDNKALHDTFSVFGNILS 158
Query: 140 CKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEK 199
CK+A DE GNS+G+GFVHFE +EAA ++I+ +NGMLLN + V+V + + +K+R+ +L E
Sbjct: 159 CKIATDEAGNSRGFGFVHFEDDEAAKEAIDAINGMLLNGQEVYVAQHVSKKDRQSKLDEA 218
Query: 200 AKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRV-MNNDGKSRGFGFVAYESPEFAEK 258
FTNVY+KN D DE+ +E F G ITS + +N+GK RGFGFV YE+ A K
Sbjct: 219 KANFTNVYVKNIHPDTGDEEFEEFFTKVGPITSAHLEKDNEGKLRGFGFVNYENHNDAAK 278
Query: 259 AVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSID 318
AV+ N + G+ L+VGRAQKK ER QELK+++E ++E+L +YQGVNL+VKNLDD+ID
Sbjct: 279 AVEELNETDFKGQTLHVGRAQKKHERLQELKKQYEAFRLEKLEKYQGVNLFVKNLDDTID 338
Query: 319 DERLRKEFTPFGTITSAK 336
D++L +EF P+GTITS K
Sbjct: 339 DQKLEEEFAPYGTITSVK 356
Score = 127 bits (319), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 80/244 (32%), Positives = 136/244 (55%), Gaps = 20/244 (8%)
Query: 80 ALDTMNFDALKGRPIRIMW--SQRDPSLR----KSGVGNVFIKNLDKSIDNKAMYDTFSA 133
A+D +N L G+ + + S++D + K+ NV++KN+ ++ + F+
Sbjct: 186 AIDAINGMLLNGQEVYVAQHVSKKDRQSKLDEAKANFTNVYVKNIHPDTGDEEFEEFFTK 245
Query: 134 FGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKERE 193
G I S + +D +G +G+GFV++E A K++E++N + + VG+ + ER
Sbjct: 246 VGPITSAHLEKDNEGKLRGFGFVNYENHNDAAKAVEELNETDFKGQTLHVGRAQKKHERL 305
Query: 194 KELGEKAKLF----------TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKS 242
+EL ++ + F N+++KN + +D+KL+E F PYGTITS +VM + +GKS
Sbjct: 306 QELKKQYEAFRLEKLEKYQGVNLFVKNLDDTIDDQKLEEEFAPYGTITSVKVMRSENGKS 365
Query: 243 RGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNR 302
+GFGFV + +PE A KA+ N + V GK LYV AQ+K R +L ++ ++ R
Sbjct: 366 KGFGFVCFSTPEEATKAITEKNQQIVAGKPLYVAIAQRKDVRRSQLAQQ---IQARNQMR 422
Query: 303 YQGV 306
YQ V
Sbjct: 423 YQQV 426
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/227 (32%), Positives = 117/227 (51%), Gaps = 18/227 (7%)
Query: 111 GNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSIE 169
++++ LD S+ +YD FS GS+ S +V +D S GY +V+F EA +IE
Sbjct: 42 ASLYVGELDPSVSEALLYDIFSPIGSVSSIRVCRDAITKTSLGYAYVNFNDHEAGKTAIE 101
Query: 170 KVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGT 229
K+N + I V I +R+ + +K N++IKN D +++ L + F +G
Sbjct: 102 KLN----YAPIKGVPCRIMWSQRDPSMRKKGS--GNIFIKNLHPDIDNKALHDTFSVFGN 155
Query: 230 ITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S ++ ++ G SRGFGFV +E E A++A+ A NG ++G+ +YV + K +R +L
Sbjct: 156 ILSCKIATDEAGNSRGFGFVHFEDDEAAKEAIDAINGMLLNGQEVYVAQHVSKKDRQSKL 215
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSA 335
+ N+YVKN+ DE + FT G ITSA
Sbjct: 216 DEA----------KANFTNVYVKNIHPDTGDEEFEEFFTKVGPITSA 252
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 66/125 (52%), Gaps = 16/125 (12%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQ----------------RDPSLRKSGVGNVFIKNLD 119
D +A++ +N KG+ + + +Q R L K N+F+KNLD
Sbjct: 275 DAAKAVEELNETDFKGQTLHVGRAQKKHERLQELKKQYEAFRLEKLEKYQGVNLFVKNLD 334
Query: 120 KSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSK 179
+ID++ + + F+ +G+I S KV + E G SKG+GFV F T E A K+I + N ++ K
Sbjct: 335 DTIDDQKLEEEFAPYGTITSVKVMRSENGKSKGFGFVCFSTPEEATKAITEKNQQIVAGK 394
Query: 180 IVFVG 184
++V
Sbjct: 395 PLYVA 399
>gi|389748929|gb|EIM90106.1| polyadenylate binding protein [Stereum hirsutum FP-91666 SS1]
Length = 682
Score = 310 bits (793), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 150/272 (55%), Positives = 201/272 (73%), Gaps = 11/272 (4%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNK---------- 125
D ERAL+ +N+ +KGR RIMWSQRDP+LRK+G GN+FIKNLD+ IDNK
Sbjct: 97 DGERALEQLNYSLIKGRACRIMWSQRDPALRKTGQGNIFIKNLDELIDNKVRTAQKTPPH 156
Query: 126 AMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGK 185
A++DTF+AFG++LSCKVA DEQG S+GYG+VH+ET EAA +I+ VNGMLLN K V+VG
Sbjct: 157 ALHDTFAAFGNVLSCKVATDEQGRSRGYGYVHYETAEAAESAIKAVNGMLLNDKKVYVGY 216
Query: 186 FIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGKSRG 244
I RKER+ +L E FTN+Y+KN + ++ E+F +G +TS + + +GKS+G
Sbjct: 217 HISRKERQSKLEEMRAHFTNLYVKNLDLEVTQDQFVELFSQFGAVTSAVIQTDEEGKSKG 276
Query: 245 FGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQ 304
FGFV +E+ E A KAV + + +GK L+V RAQKKAER +EL++ +E K+E+L++YQ
Sbjct: 277 FGFVNFENHEQAAKAVDTLHDTDFNGKKLFVSRAQKKAEREEELRKSYESAKMEKLSKYQ 336
Query: 305 GVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
GVNLY+KNL+D +DDE+LR EF PFGTITS K
Sbjct: 337 GVNLYIKNLEDDVDDEKLRAEFEPFGTITSCK 368
Score = 147 bits (372), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 81/192 (42%), Positives = 118/192 (61%), Gaps = 11/192 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
N+++KNLD + + FS FG++ S + DE+G SKG+GFV+FE E A K+++ +
Sbjct: 236 NLYVKNLDLEVTQDQFVELFSQFGAVTSAVIQTDEEGKSKGFGFVNFENHEQAAKAVDTL 295
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELG---EKAKL-------FTNVYIKNFGEDFNDEKLK 221
+ N K +FV + + ERE+EL E AK+ N+YIKN +D +DEKL+
Sbjct: 296 HDTDFNGKKLFVSRAQKKAEREEELRKSYESAKMEKLSKYQGVNLYIKNLEDDVDDEKLR 355
Query: 222 EMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
FEP+GTITS +VM +D G S+GFGFV + SP+ A KAV N K + K LYV AQ+
Sbjct: 356 AEFEPFGTITSCKVMRDDKGTSKGFGFVCFSSPDEATKAVAEMNNKMIGSKPLYVSLAQR 415
Query: 281 KAERTQELKRRF 292
+ R Q+L+ +
Sbjct: 416 REVRRQQLESQI 427
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 78/135 (57%), Gaps = 18/135 (13%)
Query: 79 RALDTMNFDALKGRPIRIMWSQ----RDPSLRKS-------------GVGNVFIKNLDKS 121
+A+DT++ G+ + + +Q R+ LRKS GV N++IKNL+
Sbjct: 290 KAVDTLHDTDFNGKKLFVSRAQKKAEREEELRKSYESAKMEKLSKYQGV-NLYIKNLEDD 348
Query: 122 IDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIV 181
+D++ + F FG+I SCKV +D++G SKG+GFV F + + A K++ ++N ++ SK +
Sbjct: 349 VDDEKLRAEFEPFGTITSCKVMRDDKGTSKGFGFVCFSSPDEATKAVAEMNNKMIGSKPL 408
Query: 182 FVGKFIPRKEREKEL 196
+V R+ R ++L
Sbjct: 409 YVSLAQRREVRRQQL 423
>gi|330793331|ref|XP_003284738.1| RNA-binding region-containing protein (RNP-1) [Dictyostelium
purpureum]
gi|325085338|gb|EGC38747.1| RNA-binding region-containing protein (RNP-1) [Dictyostelium
purpureum]
Length = 565
Score = 309 bits (792), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 153/263 (58%), Positives = 197/263 (74%), Gaps = 14/263 (5%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D ERALDT+N ++G+P RIMWSQRDPSLRKSGVGNVFIKNLDK ID+KA+YDTFSAFG
Sbjct: 63 DAERALDTLNNTPIRGKPCRIMWSQRDPSLRKSGVGNVFIKNLDKGIDHKALYDTFSAFG 122
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCKV D+ +SKG+GFVH+E++++A+K+I KVNGM++N + VFVG F KER
Sbjct: 123 NILSCKVVTDDNNSSKGFGFVHYESQDSADKAIAKVNGMMINGQKVFVGPFKSSKER--- 179
Query: 196 LGEKAKL-FTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND--GKSRGFGFVAYES 252
G+ ++ FTNV+ KN ED ++LKE+ PYGTIT+ +M ++ GKS+GF F +ES
Sbjct: 180 -GQPTEIKFTNVFFKNLAEDVTSDQLKELLAPYGTITNVAIMLDEKTGKSKGFAFANFES 238
Query: 253 PEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKN 312
+ A+ V+ NGK GK LY GRAQKK ER ELK FE +YQGVNLY+KN
Sbjct: 239 ADAAKNVVEIENGKVFHGKPLYAGRAQKKIEREAELKHTFE-------TKYQGVNLYIKN 291
Query: 313 LDDSIDDERLRKEFTPFGTITSA 335
+DDSID+++LR+ F+ FGTITSA
Sbjct: 292 IDDSIDNDKLREVFSQFGTITSA 314
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/188 (37%), Positives = 111/188 (59%), Gaps = 6/188 (3%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQ-GNSKGYGFVHFETEEAANKSIEK 170
NVF KNL + + + + + + +G+I + + DE+ G SKG+ F +FE+ +AA +E
Sbjct: 189 NVFFKNLAEDVTSDQLKELLAPYGTITNVAIMLDEKTGKSKGFAFANFESADAAKNVVEI 248
Query: 171 VNGMLLNSKIVFVGKFIPRKEREKELG---EKAKLFTNVYIKNFGEDFNDEKLKEMFEPY 227
NG + + K ++ G+ + ERE EL E N+YIKN + +++KL+E+F +
Sbjct: 249 ENGKVFHGKPLYAGRAQKKIEREAELKHTFETKYQGVNLYIKNIDDSIDNDKLREVFSQF 308
Query: 228 GTITSYRVMNND--GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERT 285
GTITS VM +D S+GFGFV Y SP+ A +AV NG+ + K LYV AQ+K R
Sbjct: 309 GTITSAVVMKDDKATTSKGFGFVCYTSPDEATRAVTEMNGRMIGTKPLYVALAQRKDIRR 368
Query: 286 QELKRRFE 293
+L+ + +
Sbjct: 369 AQLEMQHQ 376
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 63/136 (46%), Gaps = 20/136 (14%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM--NNDGKSRGFGFVAYESPEFAEKAVQ 261
+++Y+ + + +++ L E+F G +++ RV N +S + +V Y + AE+A+
Sbjct: 10 SSLYVGDLLPEVSEQTLFEVFNQVGLVSNIRVCRDTNTRRSLSYAYVNYYNAADAERALD 69
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGV-NLYVKNLDDSIDDE 320
N + GK + +Q+ R GV N+++KNLD ID +
Sbjct: 70 TLNNTPIRGKPCRIMWSQRDPSL-----------------RKSGVGNVFIKNLDKGIDHK 112
Query: 321 RLRKEFTPFGTITSAK 336
L F+ FG I S K
Sbjct: 113 ALYDTFSAFGNILSCK 128
>gi|164657987|ref|XP_001730119.1| hypothetical protein MGL_2501 [Malassezia globosa CBS 7966]
gi|159104014|gb|EDP42905.1| hypothetical protein MGL_2501 [Malassezia globosa CBS 7966]
Length = 664
Score = 309 bits (792), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 146/262 (55%), Positives = 197/262 (75%), Gaps = 2/262 (0%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D+ERAL+ +N+ ++GRP RIMWSQRDP R++G GN+FIKNLD++IDNKA++DTF+AFG
Sbjct: 133 DSERALEQLNYTPIRGRPCRIMWSQRDPGQRRAGQGNIFIKNLDEAIDNKALHDTFAAFG 192
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
ILSCKVA +E G S GYGFVH+E+ +AA +I+ VNGMLLN K V+VG I +K+R+ +
Sbjct: 193 KILSCKVASNEHG-SLGYGFVHYESNDAAEAAIKHVNGMLLNDKKVYVGHHISKKDRQAK 251
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGKSRGFGFVAYESPE 254
+ E +TNVY+KN E+ +++FE YG ITS + + +GKSRGFGFV + E
Sbjct: 252 IEEARAHYTNVYVKNLDPAVTQEEFEKLFEKYGKITSAAIATDQEGKSRGFGFVNFSEHE 311
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A KAV+ N E G+ L++GRAQKK+ER +EL+R +E K E+L++YQGVNLY+KNL
Sbjct: 312 QAAKAVEELNDTEFHGQKLFLGRAQKKSEREEELRRAYEAAKNEKLSKYQGVNLYIKNLP 371
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
+ DDERL++EF PFGT TSAK
Sbjct: 372 EDFDDERLQEEFAPFGTTTSAK 393
Score = 151 bits (382), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 80/188 (42%), Positives = 116/188 (61%), Gaps = 11/188 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV++KNLD ++ + F +G I S +A D++G S+G+GFV+F E A K++E++
Sbjct: 261 NVYVKNLDPAVTQEEFEKLFEKYGKITSAAIATDQEGKSRGFGFVNFSEHEQAAKAVEEL 320
Query: 172 NGMLLNSKIVFVGKFIPRKEREKEL--------GEKAKLF--TNVYIKNFGEDFNDEKLK 221
N + + +F+G+ + ERE+EL EK + N+YIKN EDF+DE+L+
Sbjct: 321 NDTEFHGQKLFLGRAQKKSEREEELRRAYEAAKNEKLSKYQGVNLYIKNLPEDFDDERLQ 380
Query: 222 EMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
E F P+GT TS +VM G SRGFGFV Y +PE A KAV NGK ++ + LYV AQ+
Sbjct: 381 EEFAPFGTTTSAKVMRTPTGASRGFGFVCYSAPEEANKAVAEMNGKMIENRPLYVALAQR 440
Query: 281 KAERTQEL 288
K R Q+L
Sbjct: 441 KDVRHQQL 448
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 119/225 (52%), Gaps = 17/225 (7%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSIEK 170
++++ L+ +++ +++ F+ G++ S +V +D S GY +V+F E + +++E+
Sbjct: 81 SLYVGELEPNVNEAILFEIFNMVGAVSSIRVCRDTVTRRSLGYAYVNFLNAEDSERALEQ 140
Query: 171 VNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTI 230
+N + + + +++ G++ N++IKN E +++ L + F +G I
Sbjct: 141 LNYTPIRGRPCRI------MWSQRDPGQRRAGQGNIFIKNLDEAIDNKALHDTFAAFGKI 194
Query: 231 TSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKR 290
S +V +N+ S G+GFV YES + AE A++ NG ++ K +YVG K +R
Sbjct: 195 LSCKVASNEHGSLGYGFVHYESNDAAEAAIKHVNGMLLNDKKVYVGHHISKKDR------ 248
Query: 291 RFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSA 335
KIE R N+YVKNLD ++ E K F +G ITSA
Sbjct: 249 ---QAKIEEA-RAHYTNVYVKNLDPAVTQEEFEKLFEKYGKITSA 289
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 68/135 (50%), Gaps = 18/135 (13%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQ 261
T++Y+ + N+ L E+F G ++S RV + +S G+ +V + + E +E+A++
Sbjct: 80 TSLYVGELEPNVNEAILFEIFNMVGAVSSIRVCRDTVTRRSLGYAYVNFLNAEDSERALE 139
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDER 321
N + G+ + +Q+ +RR QG N+++KNLD++ID++
Sbjct: 140 QLNYTPIRGRPCRIMWSQRDPG-----QRRAG----------QG-NIFIKNLDEAIDNKA 183
Query: 322 LRKEFTPFGTITSAK 336
L F FG I S K
Sbjct: 184 LHDTFAAFGKILSCK 198
>gi|223590120|sp|A5DM21.2|PABP_PICGU RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|190347872|gb|EDK40224.2| hypothetical protein PGUG_04322 [Meyerozyma guilliermondii ATCC
6260]
Length = 631
Score = 309 bits (792), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 155/262 (59%), Positives = 202/262 (77%), Gaps = 1/262 (0%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D RA++ +N+ + GRP RIMWSQRDPSLR++G GN+FIKNL +IDNKA++DTFSAFG
Sbjct: 111 DGSRAIEELNYSLVDGRPCRIMWSQRDPSLRRNGDGNIFIKNLHPAIDNKALHDTFSAFG 170
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
ILSCKVA DE G SK +GFVH+ET EAA +IE VNGMLLN + VFVGK + +++RE +
Sbjct: 171 RILSCKVATDELGQSKCFGFVHYETAEAAEAAIENVNGMLLNDREVFVGKHVSKRDRESK 230
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRV-MNNDGKSRGFGFVAYESPE 254
E FTNVY+KN + ++ K +E+F+P+G +TS + + +GKSRGFGFV +E+ E
Sbjct: 231 FEEMKANFTNVYVKNLAPEVDNAKFEEIFKPFGPVTSVHLETDQEGKSRGFGFVNFENHE 290
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A AV+ N KE+DG+ LYVGRAQKK ER ELKR +E ++E+L++YQGVNL+VKNLD
Sbjct: 291 SALNAVKEMNDKEIDGQKLYVGRAQKKRERLDELKRLYESTRLEKLSKYQGVNLFVKNLD 350
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
DSID E+L +EF PFGTITSA+
Sbjct: 351 DSIDSEKLEEEFKPFGTITSAR 372
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 75/198 (37%), Positives = 122/198 (61%), Gaps = 11/198 (5%)
Query: 107 KSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANK 166
K+ NV++KNL +DN + F FG + S + D++G S+G+GFV+FE E+A
Sbjct: 235 KANFTNVYVKNLAPEVDNAKFEEIFKPFGPVTSVHLETDQEGKSRGFGFVNFENHESALN 294
Query: 167 SIEKVNGMLLNSKIVFVGKFIPRKEREKELG---EKAKL-------FTNVYIKNFGEDFN 216
+++++N ++ + ++VG+ ++ER EL E +L N+++KN + +
Sbjct: 295 AVKEMNDKEIDGQKLYVGRAQKKRERLDELKRLYESTRLEKLSKYQGVNLFVKNLDDSID 354
Query: 217 DEKLKEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYV 275
EKL+E F+P+GTITS RVM +D GKS+GFGFV + SPE A KA+ N + + GK LYV
Sbjct: 355 SEKLEEEFKPFGTITSARVMVDDAGKSKGFGFVCFSSPEEATKAITEMNQRMIQGKPLYV 414
Query: 276 GRAQKKAERTQELKRRFE 293
AQ+K R +L+++ +
Sbjct: 415 ALAQRKDVRRSQLEQQIQ 432
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 119/224 (53%), Gaps = 18/224 (8%)
Query: 113 VFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSIEKV 171
+++ L+ S++ +++ FS G + S +V +D S GY +V+F +++IE++
Sbjct: 60 LYVGELNPSVNEALLFEIFSPIGQVSSIRVCRDAVTKKSLGYAYVNFHKHADGSRAIEEL 119
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTIT 231
N L++ + I +R+ L N++IKN +++ L + F +G I
Sbjct: 120 NYSLVDGRPC----RIMWSQRDPSLRRNGD--GNIFIKNLHPAIDNKALHDTFSAFGRIL 173
Query: 232 SYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKR 290
S +V ++ G+S+ FGFV YE+ E AE A++ NG ++ + ++VG+ K +R +
Sbjct: 174 SCKVATDELGQSKCFGFVHYETAEAAEAAIENVNGMLLNDREVFVGKHVSKRDR----ES 229
Query: 291 RFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITS 334
+FE +K N+YVKNL +D+ + + F PFG +TS
Sbjct: 230 KFEEMKANF------TNVYVKNLAPEVDNAKFEEIFKPFGPVTS 267
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 55/90 (61%)
Query: 95 RIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYG 154
R+ S R L K N+F+KNLD SID++ + + F FG+I S +V D+ G SKG+G
Sbjct: 326 RLYESTRLEKLSKYQGVNLFVKNLDDSIDSEKLEEEFKPFGTITSARVMVDDAGKSKGFG 385
Query: 155 FVHFETEEAANKSIEKVNGMLLNSKIVFVG 184
FV F + E A K+I ++N ++ K ++V
Sbjct: 386 FVCFSSPEEATKAITEMNQRMIQGKPLYVA 415
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 59/133 (44%), Gaps = 18/133 (13%)
Query: 206 VYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQAW 263
+Y+ N+ L E+F P G ++S RV + KS G+ +V + +A++
Sbjct: 60 LYVGELNPSVNEALLFEIFSPIGQVSSIRVCRDAVTKKSLGYAYVNFHKHADGSRAIEEL 119
Query: 264 NGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLR 323
N VDG+ + +Q+ L R N+++KNL +ID++ L
Sbjct: 120 NYSLVDGRPCRIMWSQRDPS----------------LRRNGDGNIFIKNLHPAIDNKALH 163
Query: 324 KEFTPFGTITSAK 336
F+ FG I S K
Sbjct: 164 DTFSAFGRILSCK 176
>gi|157823445|ref|NP_001099899.1| polyadenylate-binding protein 4-like [Rattus norvegicus]
gi|149027259|gb|EDL82942.1| rCG37805 [Rattus norvegicus]
Length = 370
Score = 309 bits (792), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 154/279 (55%), Positives = 205/279 (73%), Gaps = 8/279 (2%)
Query: 60 LGSGAI-LVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNL 118
LG G + +Q+G D ++AL+TMNFD +KG+ IR+MWSQRD LRKSG+GNVFIKNL
Sbjct: 51 LGYGYVNFLQVG-----DAQKALETMNFDLIKGKSIRLMWSQRDACLRKSGIGNVFIKNL 105
Query: 119 DKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNS 178
DKSIDNK +Y+ FS FG I+S KV DE+G SKGYGFVH++ + AA+++IE++NG LL
Sbjct: 106 DKSIDNKTLYEHFSPFGKIMSSKVMTDEEG-SKGYGFVHYQDQRAADRAIEEMNGKLLRD 164
Query: 179 KIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN 238
+FV +F RK+RE EL EK FTNVYIKNFG+D +DE L+ +F YG S +VM +
Sbjct: 165 STLFVARFKSRKDREAELREKPAEFTNVYIKNFGDDMDDESLRSVFSKYGQTLSVKVMKD 224
Query: 239 -DGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKI 297
GKS+ FGFV+++S + A+ AV+ NG++++G+ ++VGRAQKK ER ELK FE +K
Sbjct: 225 ASGKSKRFGFVSFDSHKAAKNAVEDMNGRDINGQTIFVGRAQKKVERQAELKEMFEQMKK 284
Query: 298 ERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
ER+ Q LY+KNLDD+IDDE LRKEF+ FG+I K
Sbjct: 285 ERIRARQAAKLYIKNLDDTIDDETLRKEFSVFGSICRVK 323
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 73/220 (33%), Positives = 121/220 (55%), Gaps = 16/220 (7%)
Query: 77 TERALDTMNFDALKGRPIRIMW----SQRDPSLRK--SGVGNVFIKNLDKSIDNKAMYDT 130
+RA++ MN L+ + + R+ LR+ + NV+IKN +D++++
Sbjct: 150 ADRAIEEMNGKLLRDSTLFVARFKSRKDREAELREKPAEFTNVYIKNFGDDMDDESLRSV 209
Query: 131 FSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRK 190
FS +G LS KV +D G SK +GFV F++ +AA ++E +NG +N + +FVG+ +
Sbjct: 210 FSKYGQTLSVKVMKDASGKSKRFGFVSFDSHKAAKNAVEDMNGRDINGQTIFVGRAQKKV 269
Query: 191 EREKELGE----------KAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDG 240
ER+ EL E +A+ +YIKN + +DE L++ F +G+I +VM G
Sbjct: 270 ERQAELKEMFEQMKKERIRARQAAKLYIKNLDDTIDDETLRKEFSVFGSICRVKVMQEAG 329
Query: 241 KSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
+S+GFG + + SPE A KA+ NG+ + K L + QK
Sbjct: 330 QSKGFGLICFFSPEAAAKAMAEMNGRILGSKPLNIALGQK 369
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 119/228 (52%), Gaps = 17/228 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGN-SKGYGFVHFETEEAANKSI 168
++++ +L + + ++ F+ G +LS ++ +D + S GYG+V+F A K++
Sbjct: 9 AASLYVGDLHEDVTEDLLFRKFNTVGPVLSIRICRDLISHRSLGYGYVNFLQVGDAQKAL 68
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
E +N L+ GK I +++ + NV+IKN + +++ L E F P+G
Sbjct: 69 ETMNFDLIK------GKSIRLMWSQRDACLRKSGIGNVFIKNLDKSIDNKTLYEHFSPFG 122
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S +VM ++ S+G+GFV Y+ A++A++ NGK + L+V R + + +R EL
Sbjct: 123 KIMSSKVMTDEEGSKGYGFVHYQDQRAADRAIEEMNGKLLRDSTLFVARFKSRKDREAEL 182
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ + + N+Y+KN D +DDE LR F+ +G S K
Sbjct: 183 REK----------PAEFTNVYIKNFGDDMDDESLRSVFSKYGQTLSVK 220
>gi|400234898|gb|AFP74112.1| poly-A binding protein, partial [Nicotiana benthamiana]
Length = 643
Score = 309 bits (792), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 158/286 (55%), Positives = 213/286 (74%), Gaps = 9/286 (3%)
Query: 56 TCHQLGS----GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVG 111
C L S G V G P D RAL+ +NF L G+PIRIM+S RDP++R+SG G
Sbjct: 58 VCRDLTSQRSLGYGYVNYGNPQ--DAARALEVLNFTPLHGKPIRIMYSNRDPTIRRSGNG 115
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
N+FIKNLDK+ID+KA++DTFSAFG+ILSCKVA D G SKGYGFV ++++EAA K+IEK+
Sbjct: 116 NIFIKNLDKAIDHKALHDTFSAFGNILSCKVAVDSSGQSKGYGFVQYDSDEAAQKAIEKL 175
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTIT 231
NGMLLN K V+VG F+ ++ER+ + +K + FTNV++KN E +E+L+++F +GTIT
Sbjct: 176 NGMLLNDKQVYVGPFVRKQERDMAV-DKTR-FTNVFVKNLSESTLEEELRKIFGEFGTIT 233
Query: 232 SYRVMNN-DGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKR 290
S VM + DGKSR FGFV +E+ E A +AV+A NG ++D K +VGRAQKK+ER ELK
Sbjct: 234 SVAVMKDEDGKSRCFGFVNFENAEDAARAVEALNGYKLDNKDWFVGRAQKKSEREMELKH 293
Query: 291 RFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RFE E +++ QG+NLY+KNLDDSI D++L++ F+P+GTITS K
Sbjct: 294 RFEQSAQEAVDKSQGLNLYLKNLDDSISDDKLKELFSPYGTITSCK 339
Score = 151 bits (381), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 85/208 (40%), Positives = 126/208 (60%), Gaps = 11/208 (5%)
Query: 100 QRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFE 159
+RD ++ K+ NVF+KNL +S + + F FG+I S V +DE G S+ +GFV+FE
Sbjct: 195 ERDMAVDKTRFTNVFVKNLSESTLEEELRKIFGEFGTITSVAVMKDEDGKSRCFGFVNFE 254
Query: 160 TEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFT----------NVYIK 209
E A +++E +NG L++K FVG+ + ERE EL + + N+Y+K
Sbjct: 255 NAEDAARAVEALNGYKLDNKDWFVGRAQKKSEREMELKHRFEQSAQEAVDKSQGLNLYLK 314
Query: 210 NFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGKSRGFGFVAYESPEFAEKAVQAWNGKEV 268
N + +D+KLKE+F PYGTITS +VM + G S+G GFVA+ +PE A +A+ NGK V
Sbjct: 315 NLDDSISDDKLKELFSPYGTITSCKVMRDPSGVSKGSGFVAFSTPEEASRALSEMNGKMV 374
Query: 269 DGKILYVGRAQKKAERTQELKRRFEMLK 296
K LYV AQ+K ER L+ +F ++
Sbjct: 375 VSKPLYVALAQRKEERRARLQAQFSQMR 402
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/228 (32%), Positives = 127/228 (55%), Gaps = 22/228 (9%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQD-EQGNSKGYGFVHFETEEAANKSI 168
V ++++ +LD ++ + +YD F+ G ++S +V +D S GYG+V++ + A +++
Sbjct: 26 VTSLYVGDLDVNVTDSQLYDLFNQLGQVVSVRVCRDLTSQRSLGYGYVNYGNPQDAARAL 85
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
E +N L+ K + + + R + G N++IKN + + + L + F +G
Sbjct: 86 EVLNFTPLHGKPIRI-MYSNRDPTIRRSGN-----GNIFIKNLDKAIDHKALHDTFSAFG 139
Query: 229 TITSYRV-MNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQE 287
I S +V +++ G+S+G+GFV Y+S E A+KA++ NG ++ K +YVG +K ER
Sbjct: 140 NILSCKVAVDSSGQSKGYGFVQYDSDEAAQKAIEKLNGMLLNDKQVYVGPFVRKQERDMA 199
Query: 288 L-KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITS 334
+ K RF N++VKNL +S +E LRK F FGTITS
Sbjct: 200 VDKTRF-------------TNVFVKNLSESTLEEELRKIFGEFGTITS 234
>gi|406698471|gb|EKD01707.1| polyadenylate-binding protein [Trichosporon asahii var. asahii CBS
8904]
Length = 686
Score = 309 bits (792), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 150/262 (57%), Positives = 198/262 (75%), Gaps = 1/262 (0%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D ERAL+ +N+ +K RP RIMWSQRDP+LRK+G GN+FIKNLD IDNKA++DTF+AFG
Sbjct: 110 DGERALEHLNYSLIKNRPCRIMWSQRDPALRKTGQGNIFIKNLDDKIDNKALHDTFAAFG 169
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCKVA DE GNS+G+ FVH+ET EAA+ +I+ VNGMLLN K V+VG I +KER+ +
Sbjct: 170 NILSCKVATDENGNSRGFAFVHYETGEAADAAIKSVNGMLLNDKKVYVGHHISKKERQSK 229
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRV-MNNDGKSRGFGFVAYESPE 254
+ E+ FTN++IKN +F + L++MF+P+G I S + + DG S+GF FV Y + +
Sbjct: 230 VEEQRAKFTNIFIKNLEPEFTQKDLEDMFKPFGEIVSAALSVGEDGLSKGFAFVNYTTHD 289
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A+KAV N KE++GK LYVGRAQK+AER +EL+R E ++E ++ GVNLYVKN+D
Sbjct: 290 AAKKAVDELNDKEINGKKLYVGRAQKRAERDEELRRMHEERRLENESKTAGVNLYVKNID 349
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
D DD+RLR EF GTITSAK
Sbjct: 350 DEWDDDRLRSEFDFAGTITSAK 371
Score = 144 bits (363), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 81/207 (39%), Positives = 123/207 (59%), Gaps = 12/207 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
N+FIKNL+ K + D F FG I+S ++ E G SKG+ FV++ T +AA K+++++
Sbjct: 239 NIFIKNLEPEFTQKDLEDMFKPFGEIVSAALSVGEDGLSKGFAFVNYTTHDAAKKAVDEL 298
Query: 172 NGMLLNSKIVFVGKFIPRKEREKEL----------GEKAKLFTNVYIKNFGEDFNDEKLK 221
N +N K ++VG+ R ER++EL E N+Y+KN ++++D++L+
Sbjct: 299 NDKEINGKKLYVGRAQKRAERDEELRRMHEERRLENESKTAGVNLYVKNIDDEWDDDRLR 358
Query: 222 EMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
F+ GTITS +VM +D G SRGFGFV + P+ A +AVQ NGK + K LYV AQK
Sbjct: 359 SEFDFAGTITSAKVMRDDKGASRGFGFVCFSQPDEATRAVQEMNGKMIGTKPLYVSLAQK 418
Query: 281 KAERTQELKRRFEMLKIERLNRYQGVN 307
K R Q L+ + + +RL +Y N
Sbjct: 419 KEVRRQALESQMQQRNAQRL-QYAAAN 444
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 70/124 (56%), Gaps = 18/124 (14%)
Query: 77 TERALDTMNFDALKGRPIRIMWSQ----RDPSLRK-------------SGVGNVFIKNLD 119
++A+D +N + G+ + + +Q RD LR+ +GV N+++KN+D
Sbjct: 291 AKKAVDELNDKEINGKKLYVGRAQKRAERDEELRRMHEERRLENESKTAGV-NLYVKNID 349
Query: 120 KSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSK 179
D+ + F G+I S KV +D++G S+G+GFV F + A ++++++NG ++ +K
Sbjct: 350 DEWDDDRLRSEFDFAGTITSAKVMRDDKGASRGFGFVCFSQPDEATRAVQEMNGKMIGTK 409
Query: 180 IVFV 183
++V
Sbjct: 410 PLYV 413
Score = 41.6 bits (96), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 60/135 (44%), Gaps = 18/135 (13%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQ 261
++Y+ + L E+F G + S RV + +S G+ +V Y + E+A++
Sbjct: 57 ASLYVGELDPSVTEAMLFEIFNMVGPVASIRVCRDAVTRRSLGYAYVNYLNAADGERALE 116
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDER 321
N + + + +Q R L++ QG N+++KNLDD ID++
Sbjct: 117 HLNYSLIKNRPCRIMWSQ----RDPALRKTG-----------QG-NIFIKNLDDKIDNKA 160
Query: 322 LRKEFTPFGTITSAK 336
L F FG I S K
Sbjct: 161 LHDTFAAFGNILSCK 175
>gi|401886540|gb|EJT50568.1| polyadenylate-binding protein [Trichosporon asahii var. asahii CBS
2479]
Length = 686
Score = 309 bits (791), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 150/262 (57%), Positives = 198/262 (75%), Gaps = 1/262 (0%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D ERAL+ +N+ +K RP RIMWSQRDP+LRK+G GN+FIKNLD IDNKA++DTF+AFG
Sbjct: 110 DGERALEHLNYSLIKNRPCRIMWSQRDPALRKTGQGNIFIKNLDDKIDNKALHDTFAAFG 169
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCKVA DE GNS+G+ FVH+ET EAA+ +I+ VNGMLLN K V+VG I +KER+ +
Sbjct: 170 NILSCKVATDENGNSRGFAFVHYETGEAADAAIKSVNGMLLNDKKVYVGHHISKKERQSK 229
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRV-MNNDGKSRGFGFVAYESPE 254
+ E+ FTN++IKN +F + L++MF+P+G I S + + DG S+GF FV Y + +
Sbjct: 230 VEEQRAKFTNIFIKNLEPEFTQKDLEDMFKPFGEIVSAALSVGEDGLSKGFAFVNYTTHD 289
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A+KAV N KE++GK LYVGRAQK+AER +EL+R E ++E ++ GVNLYVKN+D
Sbjct: 290 AAKKAVDELNDKEINGKKLYVGRAQKRAERDEELRRMHEERRLENESKTAGVNLYVKNID 349
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
D DD+RLR EF GTITSAK
Sbjct: 350 DEWDDDRLRSEFDFAGTITSAK 371
Score = 144 bits (363), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 81/207 (39%), Positives = 123/207 (59%), Gaps = 12/207 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
N+FIKNL+ K + D F FG I+S ++ E G SKG+ FV++ T +AA K+++++
Sbjct: 239 NIFIKNLEPEFTQKDLEDMFKPFGEIVSAALSVGEDGLSKGFAFVNYTTHDAAKKAVDEL 298
Query: 172 NGMLLNSKIVFVGKFIPRKEREKEL----------GEKAKLFTNVYIKNFGEDFNDEKLK 221
N +N K ++VG+ R ER++EL E N+Y+KN ++++D++L+
Sbjct: 299 NDKEINGKKLYVGRAQKRAERDEELRRMHEERRLENESKTAGVNLYVKNIDDEWDDDRLR 358
Query: 222 EMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
F+ GTITS +VM +D G SRGFGFV + P+ A +AVQ NGK + K LYV AQK
Sbjct: 359 SEFDFAGTITSAKVMRDDKGASRGFGFVCFSQPDEATRAVQEMNGKMIGTKPLYVSLAQK 418
Query: 281 KAERTQELKRRFEMLKIERLNRYQGVN 307
K R Q L+ + + +RL +Y N
Sbjct: 419 KEVRRQALESQMQQRNAQRL-QYAAAN 444
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 70/124 (56%), Gaps = 18/124 (14%)
Query: 77 TERALDTMNFDALKGRPIRIMWSQ----RDPSLRK-------------SGVGNVFIKNLD 119
++A+D +N + G+ + + +Q RD LR+ +GV N+++KN+D
Sbjct: 291 AKKAVDELNDKEINGKKLYVGRAQKRAERDEELRRMHEERRLENESKTAGV-NLYVKNID 349
Query: 120 KSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSK 179
D+ + F G+I S KV +D++G S+G+GFV F + A ++++++NG ++ +K
Sbjct: 350 DEWDDDRLRSEFDFAGTITSAKVMRDDKGASRGFGFVCFSQPDEATRAVQEMNGKMIGTK 409
Query: 180 IVFV 183
++V
Sbjct: 410 PLYV 413
Score = 41.6 bits (96), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 60/135 (44%), Gaps = 18/135 (13%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQ 261
++Y+ + L E+F G + S RV + +S G+ +V Y + E+A++
Sbjct: 57 ASLYVGELDPSVTEAMLFEIFNMVGPVASIRVCRDAVTRRSLGYAYVNYLNAADGERALE 116
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDER 321
N + + + +Q R L++ QG N+++KNLDD ID++
Sbjct: 117 HLNYSLIKNRPCRIMWSQ----RDPALRKTG-----------QG-NIFIKNLDDKIDNKA 160
Query: 322 LRKEFTPFGTITSAK 336
L F FG I S K
Sbjct: 161 LHDTFAAFGNILSCK 175
>gi|297847300|ref|XP_002891531.1| PAB8 binding protein 8 [Arabidopsis lyrata subsp. lyrata]
gi|297337373|gb|EFH67790.1| PAB8 binding protein 8 [Arabidopsis lyrata subsp. lyrata]
Length = 669
Score = 308 bits (789), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 153/262 (58%), Positives = 200/262 (76%), Gaps = 3/262 (1%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D RAL+ +NF AL GR IR+M+S RDPSLRKSGVGN+FIKNLDKSID+KA+++TFSAFG
Sbjct: 92 DASRALNELNFMALNGRAIRVMYSVRDPSLRKSGVGNIFIKNLDKSIDHKALHETFSAFG 151
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
ILSCKVA D G SKGYGFV ++T+EAA ++I+K+NGMLLN K V+VG F+ + +R+
Sbjct: 152 PILSCKVAVDPSGQSKGYGFVQYDTDEAAQRAIDKLNGMLLNDKQVYVGPFVHKLQRDPS 211
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPE 254
GEK K FTNVY+KN E +DE+L ++F +G TS +M + +GKS+GFGFV +E+ +
Sbjct: 212 -GEKVK-FTNVYVKNLSESLSDEELNKVFGEFGVTTSCVIMRDGEGKSKGFGFVNFENSD 269
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A +AV A NGK D K +VG+AQKK+ER ELK++FE E ++ QG NLYVKNLD
Sbjct: 270 DAARAVDALNGKTFDDKEWFVGKAQKKSERETELKQKFEQSLKEAADKSQGSNLYVKNLD 329
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
+S+ D++LR+ F PFGTITS K
Sbjct: 330 ESVTDDKLREHFAPFGTITSCK 351
Score = 157 bits (398), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 89/235 (37%), Positives = 135/235 (57%), Gaps = 15/235 (6%)
Query: 77 TERALDTMNFDALKGRPIRI----MWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFS 132
+RA+D +N L + + + QRDPS K NV++KNL +S+ ++ + F
Sbjct: 180 AQRAIDKLNGMLLNDKQVYVGPFVHKLQRDPSGEKVKFTNVYVKNLSESLSDEELNKVFG 239
Query: 133 AFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKER 192
FG SC + +D +G SKG+GFV+FE + A ++++ +NG + K FVGK + ER
Sbjct: 240 EFGVTTSCVIMRDGEGKSKGFGFVNFENSDDAARAVDALNGKTFDDKEWFVGKAQKKSER 299
Query: 193 EKELGEK----------AKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GK 241
E EL +K +N+Y+KN E D+KL+E F P+GTITS +VM + G
Sbjct: 300 ETELKQKFEQSLKEAADKSQGSNLYVKNLDESVTDDKLREHFAPFGTITSCKVMRDPTGV 359
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLK 296
SRG GFVA+ +PE A +A+ NGK + K LYV AQ+K +R L+ +F ++
Sbjct: 360 SRGSGFVAFSTPEEASRAITEMNGKMIVTKPLYVALAQRKEDRKARLQAQFSQMR 414
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 126/231 (54%), Gaps = 20/231 (8%)
Query: 107 KSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQD-EQGNSKGYGFVHFETEEAAN 165
+ G ++++ +LD ++ + +++ FS G ++S +V +D S GYG+V++ T + A+
Sbjct: 35 QQGTTSLYVGDLDATVTDSQLFEAFSQAGQVVSVRVCRDMTTRRSLGYGYVNYATPQDAS 94
Query: 166 KSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFE 225
+++ ++N M LN + + V + R+ L + N++IKN + + + L E F
Sbjct: 95 RALNELNFMALNGRAIRVMYSV----RDPSLRKSG--VGNIFIKNLDKSIDHKALHETFS 148
Query: 226 PYGTITSYRV-MNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAER 284
+G I S +V ++ G+S+G+GFV Y++ E A++A+ NG ++ K +YVG K +R
Sbjct: 149 AFGPILSCKVAVDPSGQSKGYGFVQYDTDEAAQRAIDKLNGMLLNDKQVYVGPFVHKLQR 208
Query: 285 TQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSA 335
E +K N+YVKNL +S+ DE L K F FG TS
Sbjct: 209 DPS----GEKVKF--------TNVYVKNLSESLSDEELNKVFGEFGVTTSC 247
>gi|401625965|gb|EJS43937.1| pab1p [Saccharomyces arboricola H-6]
Length = 577
Score = 308 bits (789), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 147/259 (56%), Positives = 194/259 (74%), Gaps = 1/259 (0%)
Query: 79 RALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSIL 138
+A+D +N+ +KGR RIMWSQRDPSLRK G GN+FIKNL IDNKA+YDTFS FG IL
Sbjct: 94 KAIDQLNYTPIKGRLCRIMWSQRDPSLRKKGSGNIFIKNLHPDIDNKALYDTFSVFGDIL 153
Query: 139 SCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGE 198
S K+A DE G SKG+GFVHFE E AA ++I+ +NGMLLN + ++V + RKER+ +L E
Sbjct: 154 SSKIATDENGKSKGFGFVHFEEEGAAKEAIDALNGMLLNGQEIYVAPHLSRKERDSQLEE 213
Query: 199 KAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGKSRGFGFVAYESPEFAE 257
+TN+Y+KN + DEK +EMF +G I S + + DGK +GFGFV YE+ E A
Sbjct: 214 TKAHYTNLYVKNINSETTDEKFQEMFAQFGPIVSASLEKDADGKLKGFGFVNYENHEDAV 273
Query: 258 KAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSI 317
KAV+A N +++G+ LYVGRAQKK ER LK+++E ++E++ +YQGVNL+VKNLDDS+
Sbjct: 274 KAVEALNESDLNGEKLYVGRAQKKNERMHVLKKQYEAYRLEKMAKYQGVNLFVKNLDDSV 333
Query: 318 DDERLRKEFTPFGTITSAK 336
DDE+L +EF P+GTITSAK
Sbjct: 334 DDEKLEEEFAPYGTITSAK 352
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 81/231 (35%), Positives = 133/231 (57%), Gaps = 17/231 (7%)
Query: 80 ALDTMNFDALKGRPI----RIMWSQRDPSLR--KSGVGNVFIKNLDKSIDNKAMYDTFSA 133
A+D +N L G+ I + +RD L K+ N+++KN++ ++ + F+
Sbjct: 182 AIDALNGMLLNGQEIYVAPHLSRKERDSQLEETKAHYTNLYVKNINSETTDEKFQEMFAQ 241
Query: 134 FGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKERE 193
FG I+S + +D G KG+GFV++E E A K++E +N LN + ++VG+ + ER
Sbjct: 242 FGPIVSASLEKDADGKLKGFGFVNYENHEDAVKAVEALNESDLNGEKLYVGRAQKKNERM 301
Query: 194 KELGEKAKLF----------TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKS 242
L ++ + + N+++KN + +DEKL+E F PYGTITS +VM + +GKS
Sbjct: 302 HVLKKQYEAYRLEKMAKYQGVNLFVKNLDDSVDDEKLEEEFAPYGTITSAKVMRSENGKS 361
Query: 243 RGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFE 293
+GFGFV + +PE A KA+ N + V GK LYV AQ+K R +L ++ +
Sbjct: 362 KGFGFVCFSTPEEATKAITEKNQQIVAGKPLYVAIAQRKDVRRSQLAQQIQ 412
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 121/227 (53%), Gaps = 18/227 (7%)
Query: 111 GNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSIE 169
++++ +L+ ++ +YD FS GS+ S +V +D S GY +V+F EA K+I+
Sbjct: 38 ASLYVGDLEPTVSEAHLYDIFSPIGSVSSIRVCRDAITKTSLGYAYVNFNDHEAGRKAID 97
Query: 170 KVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGT 229
++N + ++ I +R+ L +K N++IKN D +++ L + F +G
Sbjct: 98 QLNYTPIKGRLC----RIMWSQRDPSLRKKGS--GNIFIKNLHPDIDNKALYDTFSVFGD 151
Query: 230 ITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S ++ ++ GKS+GFGFV +E A++A+ A NG ++G+ +YV + ER +L
Sbjct: 152 ILSSKIATDENGKSKGFGFVHFEEEGAAKEAIDALNGMLLNGQEIYVAPHLSRKERDSQL 211
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSA 335
+ + NLYVKN++ DE+ ++ F FG I SA
Sbjct: 212 EE----------TKAHYTNLYVKNINSETTDEKFQEMFAQFGPIVSA 248
>gi|302767104|ref|XP_002966972.1| hypothetical protein SELMODRAFT_168822 [Selaginella moellendorffii]
gi|300164963|gb|EFJ31571.1| hypothetical protein SELMODRAFT_168822 [Selaginella moellendorffii]
Length = 654
Score = 308 bits (789), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 150/262 (57%), Positives = 195/262 (74%), Gaps = 4/262 (1%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D RA++ +N+ + G+ IRIMWS RDPS RKSGVGN+FIKNLD+SIDNKA++DTF AFG
Sbjct: 91 DAVRAMEALNYTPINGKTIRIMWSHRDPSTRKSGVGNIFIKNLDESIDNKALHDTFIAFG 150
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
ILSCK+A + G SKGYGFVHFET+EAAN +IEKVNGM L K VFV KF+ R +R
Sbjct: 151 PILSCKIAHQD-GRSKGYGFVHFETDEAANLAIEKVNGMQLVGKKVFVAKFVKRSDRLAA 209
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDG-KSRGFGFVAYESPE 254
GE FTNV++KN + +E++KE F +G IT+ +M ++ KS+GFGFV ++ PE
Sbjct: 210 TGETK--FTNVFVKNLDPEMAEEEIKEHFSTFGVITNVVIMKDENDKSKGFGFVNFDDPE 267
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A AV+ N ++ + +YVGRAQKKAER Q L+R+FE ++E+ +YQG NLYVKNLD
Sbjct: 268 AARAAVETMNNSQLGSRTIYVGRAQKKAEREQILRRQFEEKRMEQFQKYQGANLYVKNLD 327
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
DSIDDE L++EF+ +G ITSAK
Sbjct: 328 DSIDDETLKQEFSRYGNITSAK 349
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 73/184 (39%), Positives = 111/184 (60%), Gaps = 11/184 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NVF+KNLD + + + + FS FG I + + +DE SKG+GFV+F+ EAA ++E +
Sbjct: 217 NVFVKNLDPEMAEEEIKEHFSTFGVITNVVIMKDENDKSKGFGFVNFDDPEAARAAVETM 276
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELG-----EKAKLF-----TNVYIKNFGEDFNDEKLK 221
N L S+ ++VG+ + ERE+ L ++ + F N+Y+KN + +DE LK
Sbjct: 277 NNSQLGSRTIYVGRAQKKAEREQILRRQFEEKRMEQFQKYQGANLYVKNLDDSIDDETLK 336
Query: 222 EMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
+ F YG ITS +VM ++ G S+GFGFV + SPE A +A NG ++GK +YV AQ+
Sbjct: 337 QEFSRYGNITSAKVMRDEKGISKGFGFVCFTSPEEASRAATETNGLMINGKPIYVAMAQR 396
Query: 281 KAER 284
K R
Sbjct: 397 KEIR 400
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/121 (36%), Positives = 70/121 (57%), Gaps = 16/121 (13%)
Query: 80 ALDTMNFDALKGRPIRIMWSQ----RDPSLR------------KSGVGNVFIKNLDKSID 123
A++TMN L R I + +Q R+ LR K N+++KNLD SID
Sbjct: 272 AVETMNNSQLGSRTIYVGRAQKKAEREQILRRQFEEKRMEQFQKYQGANLYVKNLDDSID 331
Query: 124 NKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFV 183
++ + FS +G+I S KV +DE+G SKG+GFV F + E A+++ + NG+++N K ++V
Sbjct: 332 DETLKQEFSRYGNITSAKVMRDEKGISKGFGFVCFTSPEEASRAATETNGLMINGKPIYV 391
Query: 184 G 184
Sbjct: 392 A 392
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 66/136 (48%), Gaps = 20/136 (14%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQ 261
++Y+ + E + +L +F G +TS RV + +S G+G+V Y S A +A++
Sbjct: 38 VSLYVGDLDETVAETQLFTIFSQMGLVTSVRVCRDAVTRRSLGYGYVNYSSGADAVRAME 97
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGV-NLYVKNLDDSIDDE 320
A N ++GK + + + + R GV N+++KNLD+SID++
Sbjct: 98 ALNYTPINGKTIRIMWSHRDPS-----------------TRKSGVGNIFIKNLDESIDNK 140
Query: 321 RLRKEFTPFGTITSAK 336
L F FG I S K
Sbjct: 141 ALHDTFIAFGPILSCK 156
>gi|115477976|ref|NP_001062583.1| Os09g0115400 [Oryza sativa Japonica Group]
gi|46389987|dbj|BAD16229.1| putative poly(A)-binding protein [Oryza sativa Japonica Group]
gi|113630816|dbj|BAF24497.1| Os09g0115400 [Oryza sativa Japonica Group]
gi|125562753|gb|EAZ08133.1| hypothetical protein OsI_30396 [Oryza sativa Indica Group]
gi|125604734|gb|EAZ43770.1| hypothetical protein OsJ_28392 [Oryza sativa Japonica Group]
gi|169244485|gb|ACA50516.1| poly(A)-binding protein [Oryza sativa Japonica Group]
gi|215695451|dbj|BAG90618.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 662
Score = 308 bits (789), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 153/262 (58%), Positives = 194/262 (74%), Gaps = 3/262 (1%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D RAL+ +NF + G+PIRIM+S RDPSLRKSG N+FIKNLDKSIDNKA+YDTF FG
Sbjct: 93 DAARALEMLNFTPINGKPIRIMYSNRDPSLRKSGTANIFIKNLDKSIDNKALYDTFCVFG 152
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCKVA D G SKGYGFV +E +EAA +I+K+NGML+N K V+VG FI ++ER+
Sbjct: 153 NILSCKVATDASGESKGYGFVQYERDEAAQAAIDKLNGMLMNDKKVYVGPFIRKQERDNS 212
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPE 254
G+ F NVY+KN E+ ++ LKE+F +GTITS VM DG+S+ FGFV +ESP+
Sbjct: 213 PGQVK--FNNVYVKNLSENTTEDDLKEIFGKFGTITSAVVMREGDGRSKCFGFVNFESPD 270
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A +AVQ NGK+ D K YVGRAQKK+ER ELK +FE E ++YQ NLY+KNLD
Sbjct: 271 DAAQAVQELNGKKFDDKEWYVGRAQKKSEREMELKEKFEKNLQEAADKYQNTNLYLKNLD 330
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
DS+DD++LR+ F +GTITS K
Sbjct: 331 DSVDDDKLRELFAEYGTITSCK 352
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 81/212 (38%), Positives = 127/212 (59%), Gaps = 11/212 (5%)
Query: 96 IMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGF 155
I +RD S + NV++KNL ++ + + F FG+I S V ++ G SK +GF
Sbjct: 204 IRKQERDNSPGQVKFNNVYVKNLSENTTEDDLKEIFGKFGTITSAVVMREGDGRSKCFGF 263
Query: 156 VHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEK--------AKLF--TN 205
V+FE+ + A ++++++NG + K +VG+ + ERE EL EK A + TN
Sbjct: 264 VNFESPDDAAQAVQELNGKKFDDKEWYVGRAQKKSEREMELKEKFEKNLQEAADKYQNTN 323
Query: 206 VYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPEFAEKAVQAWN 264
+Y+KN + +D+KL+E+F YGTITS +VM +++G SRG GFVA++S E A +A+ N
Sbjct: 324 LYLKNLDDSVDDDKLRELFAEYGTITSCKVMRDSNGVSRGSGFVAFKSAEDASRALAEMN 383
Query: 265 GKEVDGKILYVGRAQKKAERTQELKRRFEMLK 296
K V K LYV AQ+K +R L+ +F L+
Sbjct: 384 SKMVGSKPLYVALAQRKEDRKARLQAQFSQLR 415
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 121/227 (53%), Gaps = 22/227 (9%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQD-EQGNSKGYGFVHFETEEAANKSIEK 170
++++ +LD S+ + ++D F+ G ++S +V +D S GY +V++ + A +++E
Sbjct: 41 SLYVGDLDVSVQDAQLFDVFAQVGGVVSVRVCRDVNTRRSLGYAYVNYSSPADAARALEM 100
Query: 171 VNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTI 230
+N +N K + I R+ L + N++IKN + +++ L + F +G I
Sbjct: 101 LNFTPINGKPI----RIMYSNRDPSLRKSGT--ANIFIKNLDKSIDNKALYDTFCVFGNI 154
Query: 231 TSYRVMNN-DGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELK 289
S +V + G+S+G+GFV YE E A+ A+ NG ++ K +YVG +K ER
Sbjct: 155 LSCKVATDASGESKGYGFVQYERDEAAQAAIDKLNGMLMNDKKVYVGPFIRKQERDNSPG 214
Query: 290 R-RFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSA 335
+ +F N+YVKNL ++ ++ L++ F FGTITSA
Sbjct: 215 QVKFN-------------NVYVKNLSENTTEDDLKEIFGKFGTITSA 248
>gi|146415246|ref|XP_001483593.1| hypothetical protein PGUG_04322 [Meyerozyma guilliermondii ATCC
6260]
Length = 631
Score = 308 bits (788), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 155/262 (59%), Positives = 201/262 (76%), Gaps = 1/262 (0%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D RA++ +N+ + GRP RIMWSQRDPSLR++G GN+FIKNL +IDNKA++DTFSAFG
Sbjct: 111 DGSRAIEELNYSLVDGRPCRIMWSQRDPSLRRNGDGNIFIKNLHPAIDNKALHDTFSAFG 170
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
ILSCKVA DE G SK +GFVH+ET EAA +IE VNGMLLN + VFVGK + +++RE +
Sbjct: 171 RILSCKVATDELGQSKCFGFVHYETAEAAEAAIENVNGMLLNDREVFVGKHVSKRDRESK 230
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRV-MNNDGKSRGFGFVAYESPE 254
E FTNVY+KN + ++ K +E+F+P+G +TS + + +GKSRGFGFV +E+ E
Sbjct: 231 FEEMKANFTNVYVKNLAPEVDNAKFEEIFKPFGPVTSVHLETDQEGKSRGFGFVNFENHE 290
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A AV+ N KE+DG+ LYVGRAQKK ER ELKR +E ++E+L +YQGVNL+VKNLD
Sbjct: 291 SALNAVKEMNDKEIDGQKLYVGRAQKKRERLDELKRLYESTRLEKLLKYQGVNLFVKNLD 350
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
DSID E+L +EF PFGTITSA+
Sbjct: 351 DSIDSEKLEEEFKPFGTITSAR 372
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 75/198 (37%), Positives = 122/198 (61%), Gaps = 11/198 (5%)
Query: 107 KSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANK 166
K+ NV++KNL +DN + F FG + S + D++G S+G+GFV+FE E+A
Sbjct: 235 KANFTNVYVKNLAPEVDNAKFEEIFKPFGPVTSVHLETDQEGKSRGFGFVNFENHESALN 294
Query: 167 SIEKVNGMLLNSKIVFVGKFIPRKEREKELG---EKAKL-------FTNVYIKNFGEDFN 216
+++++N ++ + ++VG+ ++ER EL E +L N+++KN + +
Sbjct: 295 AVKEMNDKEIDGQKLYVGRAQKKRERLDELKRLYESTRLEKLLKYQGVNLFVKNLDDSID 354
Query: 217 DEKLKEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYV 275
EKL+E F+P+GTITS RVM +D GKS+GFGFV + SPE A KA+ N + + GK LYV
Sbjct: 355 SEKLEEEFKPFGTITSARVMVDDAGKSKGFGFVCFSSPEEATKAITEMNQRMIQGKPLYV 414
Query: 276 GRAQKKAERTQELKRRFE 293
AQ+K R +L+++ +
Sbjct: 415 ALAQRKDVRRSQLEQQIQ 432
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 119/224 (53%), Gaps = 18/224 (8%)
Query: 113 VFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSIEKV 171
+++ L+ S++ +++ FS G + S +V +D S GY +V+F +++IE++
Sbjct: 60 LYVGELNPSVNEALLFEIFSPIGQVSSIRVCRDAVTKKSLGYAYVNFHKHADGSRAIEEL 119
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTIT 231
N L++ + I +R+ L N++IKN +++ L + F +G I
Sbjct: 120 NYSLVDGRPC----RIMWSQRDPSLRRNGD--GNIFIKNLHPAIDNKALHDTFSAFGRIL 173
Query: 232 SYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKR 290
S +V ++ G+S+ FGFV YE+ E AE A++ NG ++ + ++VG+ K +R +
Sbjct: 174 SCKVATDELGQSKCFGFVHYETAEAAEAAIENVNGMLLNDREVFVGKHVSKRDR----ES 229
Query: 291 RFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITS 334
+FE +K N+YVKNL +D+ + + F PFG +TS
Sbjct: 230 KFEEMKANF------TNVYVKNLAPEVDNAKFEEIFKPFGPVTS 267
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 53/80 (66%), Gaps = 1/80 (1%)
Query: 105 LRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAA 164
L+ GV N+F+KNLD SID++ + + F FG+I S +V D+ G SKG+GFV F + E A
Sbjct: 337 LKYQGV-NLFVKNLDDSIDSEKLEEEFKPFGTITSARVMVDDAGKSKGFGFVCFSSPEEA 395
Query: 165 NKSIEKVNGMLLNSKIVFVG 184
K+I ++N ++ K ++V
Sbjct: 396 TKAITEMNQRMIQGKPLYVA 415
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 59/133 (44%), Gaps = 18/133 (13%)
Query: 206 VYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQAW 263
+Y+ N+ L E+F P G ++S RV + KS G+ +V + +A++
Sbjct: 60 LYVGELNPSVNEALLFEIFSPIGQVSSIRVCRDAVTKKSLGYAYVNFHKHADGSRAIEEL 119
Query: 264 NGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLR 323
N VDG+ + +Q+ L R N+++KNL +ID++ L
Sbjct: 120 NYSLVDGRPCRIMWSQRDPS----------------LRRNGDGNIFIKNLHPAIDNKALH 163
Query: 324 KEFTPFGTITSAK 336
F+ FG I S K
Sbjct: 164 DTFSAFGRILSCK 176
>gi|440797930|gb|ELR19004.1| polyadenylate-binding protein family protein [Acanthamoeba
castellanii str. Neff]
Length = 462
Score = 308 bits (788), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 154/266 (57%), Positives = 196/266 (73%), Gaps = 9/266 (3%)
Query: 74 MLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSA 133
++D ERALDT+N+ +KGRP RIMWS RDPS+RKSG GN+FIKNLDKSIDNKA+YDTFSA
Sbjct: 61 VVDAERALDTLNYTLIKGRPCRIMWSHRDPSIRKSGQGNIFIKNLDKSIDNKALYDTFSA 120
Query: 134 FGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKERE 193
FG+ILSCKV D +GNSKGYGFVH+ET EAA+ +I KVNG +LN KIV+VG+FI RKER
Sbjct: 121 FGNILSCKVVTDGKGNSKGYGFVHYETSEAADSAIAKVNGKMLNGKIVYVGRFIARKERT 180
Query: 194 KELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDGK-SRGFGFVAYES 252
G + FTN+YIKN GE + +E LK F +GT+ S +M + R F FV +E
Sbjct: 181 P--GSDPEKFTNIYIKNLGEAYTEEDLKRDFGAFGTVQSAVLMKDPRDIGRQFAFVNFED 238
Query: 253 PEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKN 312
E A +A + NG+++ K +YVGRAQKK+ER L++ L+ ER +YQG+NLY+KN
Sbjct: 239 HEAAHRATEELNGRKLGDKEVYVGRAQKKSERESFLRK----LREERAQKYQGINLYIKN 294
Query: 313 LDDSIDDERLRKEFT--PFGTITSAK 336
LDD+++DE L K F+ PFG ITS K
Sbjct: 295 LDDTVNDEELHKLFSALPFGQITSCK 320
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 79/202 (39%), Positives = 120/202 (59%), Gaps = 9/202 (4%)
Query: 96 IMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGF 155
I +R P N++IKNL ++ + + F AFG++ S + +D + + + F
Sbjct: 174 IARKERTPGSDPEKFTNIYIKNLGEAYTEEDLKRDFGAFGTVQSAVLMKDPRDIGRQFAF 233
Query: 156 VHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKEL----GEKAKLF--TNVYIK 209
V+FE EAA+++ E++NG L K V+VG+ + ERE L E+A+ + N+YIK
Sbjct: 234 VNFEDHEAAHRATEELNGRKLGDKEVYVGRAQKKSERESFLRKLREERAQKYQGINLYIK 293
Query: 210 NFGEDFNDEKLKEMFE--PYGTITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGK 266
N + NDE+L ++F P+G ITS +VM++D G SRGFGFV Y +PE A KAV NGK
Sbjct: 294 NLDDTVNDEELHKLFSALPFGQITSCKVMSDDKGNSRGFGFVCYTNPEDASKAVSEMNGK 353
Query: 267 EVDGKILYVGRAQKKAERTQEL 288
V K +YV A++K R+ +L
Sbjct: 354 MVANKPIYVALAERKDVRSAKL 375
Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 123/228 (53%), Gaps = 22/228 (9%)
Query: 111 GNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSIE 169
++++ +L+ ++ +++ F A G + S +V +D S GY +V+F A ++++
Sbjct: 10 ASLYVGDLNPTVTEALLFEIFKAVGPVASIRVCRDAVTRRSLGYAYVNFHNVVDAERALD 69
Query: 170 KVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGT 229
+N L+ + + + R ++ G+ N++IKN + +++ L + F +G
Sbjct: 70 TLNYTLIKGRPCRI-MWSHRDPSIRKSGQ-----GNIFIKNLDKSIDNKALYDTFSAFGN 123
Query: 230 ITSYRVMNN-DGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQ-E 287
I S +V+ + G S+G+GFV YE+ E A+ A+ NGK ++GKI+YVGR + ERT
Sbjct: 124 ILSCKVVTDGKGNSKGYGFVHYETSEAADSAIAKVNGKMLNGKIVYVGRFIARKERTPGS 183
Query: 288 LKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSA 335
+F N+Y+KNL ++ +E L+++F FGT+ SA
Sbjct: 184 DPEKF-------------TNIYIKNLGEAYTEEDLKRDFGAFGTVQSA 218
>gi|224063493|ref|XP_002301171.1| predicted protein [Populus trichocarpa]
gi|222842897|gb|EEE80444.1| predicted protein [Populus trichocarpa]
Length = 657
Score = 308 bits (788), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 151/262 (57%), Positives = 198/262 (75%), Gaps = 4/262 (1%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D RALD +NF L +P+RIM+S RDPS+RKSG+ N+FIKNLDK+ID+KA++DTFS+FG
Sbjct: 84 DAARALDVLNFTPLNNKPLRIMYSHRDPSIRKSGMANIFIKNLDKTIDHKALHDTFSSFG 143
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCKVA D G SKGYGFV F++EEAA +I+K+NGML+N K V+VG F+ ++ER+
Sbjct: 144 NILSCKVATDASGQSKGYGFVQFDSEEAAQNAIDKLNGMLINDKQVYVGNFLRKQERDSA 203
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGKSRGFGFVAYESPE 254
L F N+Y+KN E DE LK +FE +G ITS VM + DGKS+ FGFV +E+ +
Sbjct: 204 LSNIK--FNNIYVKNLAESTTDEDLKSIFEEHGAITSAVVMRDADGKSKCFGFVNFENVD 261
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A KAV+A NGK+ D K YVG+AQKK+ER ELK RFE +E + +YQ VNLY+KNLD
Sbjct: 262 DAAKAVEALNGKKFDDKEWYVGKAQKKSERELELKGRFEQ-SLESVEKYQAVNLYIKNLD 320
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
DS++DE+L++ F+ FGTITS K
Sbjct: 321 DSVNDEKLKELFSDFGTITSCK 342
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 84/207 (40%), Positives = 122/207 (58%), Gaps = 10/207 (4%)
Query: 100 QRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFE 159
+RD +L N+++KNL +S ++ + F G+I S V +D G SK +GFV+FE
Sbjct: 199 ERDSALSNIKFNNIYVKNLAESTTDEDLKSIFEEHGAITSAVVMRDADGKSKCFGFVNFE 258
Query: 160 TEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELG-------EKAKLF--TNVYIKN 210
+ A K++E +NG + K +VGK + ERE EL E + + N+YIKN
Sbjct: 259 NVDDAAKAVEALNGKKFDDKEWYVGKAQKKSERELELKGRFEQSLESVEKYQAVNLYIKN 318
Query: 211 FGEDFNDEKLKEMFEPYGTITSYRVMNN-DGKSRGFGFVAYESPEFAEKAVQAWNGKEVD 269
+ NDEKLKE+F +GTITS +VM++ G SRG GFVA+ +PE A +A+ NGK V
Sbjct: 319 LDDSVNDEKLKELFSDFGTITSCKVMHDPSGISRGSGFVAFSTPEEASRALAELNGKMVV 378
Query: 270 GKILYVGRAQKKAERTQELKRRFEMLK 296
K LYV AQ+K ER L+ +F ++
Sbjct: 379 SKPLYVAPAQRKEERRARLQAQFSQMR 405
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 121/227 (53%), Gaps = 22/227 (9%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQD-EQGNSKGYGFVHFETEEAANKSIEK 170
++++ +LD ++ + +YD F+ G ++S +V +D S GYG+V++ + A ++++
Sbjct: 32 SLYVGDLDFNVTDSQLYDLFNQVGQVVSVRVCRDLSTRRSLGYGYVNYSNPQDAARALDV 91
Query: 171 VNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTI 230
+N LN+K + + + R ++ G N++IKN + + + L + F +G I
Sbjct: 92 LNFTPLNNKPLRI-MYSHRDPSIRKSG-----MANIFIKNLDKTIDHKALHDTFSSFGNI 145
Query: 231 TSYRVMNN-DGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELK 289
S +V + G+S+G+GFV ++S E A+ A+ NG ++ K +YVG +K ER L
Sbjct: 146 LSCKVATDASGQSKGYGFVQFDSEEAAQNAIDKLNGMLINDKQVYVGNFLRKQERDSALS 205
Query: 290 R-RFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSA 335
+F N+YVKNL +S DE L+ F G ITSA
Sbjct: 206 NIKFN-------------NIYVKNLAESTTDEDLKSIFEEHGAITSA 239
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 66/108 (61%), Gaps = 5/108 (4%)
Query: 89 LKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQG 148
LKGR + Q S+ K N++IKNLD S++++ + + FS FG+I SCKV D G
Sbjct: 295 LKGR-----FEQSLESVEKYQAVNLYIKNLDDSVNDEKLKELFSDFGTITSCKVMHDPSG 349
Query: 149 NSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKEL 196
S+G GFV F T E A++++ ++NG ++ SK ++V ++ER L
Sbjct: 350 ISRGSGFVAFSTPEEASRALAELNGKMVVSKPLYVAPAQRKEERRARL 397
>gi|449501704|ref|XP_004161443.1| PREDICTED: LOW QUALITY PROTEIN: polyadenylate-binding protein
2-like [Cucumis sativus]
Length = 576
Score = 307 bits (787), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 155/263 (58%), Positives = 197/263 (74%), Gaps = 3/263 (1%)
Query: 75 LDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAF 134
L RALD +NF G+PIR+M+S RDPS+RKSG GN+FIKNLDK+ID+KA++DTFSAF
Sbjct: 3 LLAARALDVLNFTPXNGKPIRVMYSHRDPSIRKSGAGNIFIKNLDKAIDHKALHDTFSAF 62
Query: 135 GSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREK 194
GSILSCKVA D G SKGYGFV F+ EE+A K+IEK+NGMLLN K V+VG F+ ++ER+
Sbjct: 63 GSILSCKVALDSSGQSKGYGFVQFDNEESALKAIEKLNGMLLNDKQVYVGPFLRKQERDG 122
Query: 195 ELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGKSRGFGFVAYESP 253
+ +K+K F NV++KN E +E L + F +GT+TS VM + DGKSR FGFV +E+
Sbjct: 123 VV-DKSK-FNNVFVKNLSETTTEEDLNKAFSEFGTLTSIVVMRDADGKSRCFGFVNFENA 180
Query: 254 EFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNL 313
+ A +AV NGK VD K YVG+AQKK+ER ELK RFE E ++YQG NLY+KNL
Sbjct: 181 DDAARAVDTLNGKLVDDKEWYVGKAQKKSEREVELKHRFEQTMKEAADKYQGANLYIKNL 240
Query: 314 DDSIDDERLRKEFTPFGTITSAK 336
DDSI D++L++ F PFGTITS K
Sbjct: 241 DDSIGDDKLKELFAPFGTITSCK 263
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 83/208 (39%), Positives = 126/208 (60%), Gaps = 11/208 (5%)
Query: 100 QRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFE 159
+RD + KS NVF+KNL ++ + + FS FG++ S V +D G S+ +GFV+FE
Sbjct: 119 ERDGVVDKSKFNNVFVKNLSETTTEEDLNKAFSEFGTLTSIVVMRDADGKSRCFGFVNFE 178
Query: 160 TEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELG--------EKAKLF--TNVYIK 209
+ A ++++ +NG L++ K +VGK + ERE EL E A + N+YIK
Sbjct: 179 NADDAARAVDTLNGKLVDDKEWYVGKAQKKSEREVELKHRFEQTMKEAADKYQGANLYIK 238
Query: 210 NFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGKSRGFGFVAYESPEFAEKAVQAWNGKEV 268
N + D+KLKE+F P+GTITS +VM + +G SRG GFVA+ +P+ A +A+ NGK V
Sbjct: 239 NLDDSIGDDKLKELFAPFGTITSCKVMRDPNGISRGSGFVAFSTPDEASRALVEMNGKMV 298
Query: 269 DGKILYVGRAQKKAERTQELKRRFEMLK 296
K LYV AQ+K +R L+ +F ++
Sbjct: 299 VSKPLYVALAQRKEDRRARLQAQFSQIR 326
>gi|443895761|dbj|GAC73106.1| polyadenylate-binding protein [Pseudozyma antarctica T-34]
Length = 556
Score = 307 bits (787), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 148/262 (56%), Positives = 195/262 (74%), Gaps = 2/262 (0%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D ERA++ +N+ ++ RP RIMWSQRDP+LR++G GN+FIKNLD IDNKA++DTF+AFG
Sbjct: 99 DGERAMEQLNYSLIRNRPCRIMWSQRDPALRRTGQGNIFIKNLDAGIDNKALHDTFAAFG 158
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCKVA E G S GYGFVH+ET EAA+ +I+ VNGMLLN K V+VG IPRKER+ +
Sbjct: 159 NILSCKVATSESG-SLGYGFVHYETAEAADAAIKHVNGMLLNDKKVYVGHHIPRKERQAK 217
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPE 254
+ E FTNVY KN D DE+ +++F YG ITS + + DGKS+GFGFV +E+ +
Sbjct: 218 IEESRARFTNVYCKNVDADVTDEEFEKLFTKYGKITSCVLQRDEDGKSKGFGFVNFENHD 277
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A+ AV + + G+ L+V RAQKK+ER +EL+R +E K E+L ++QGVNLY+KN+
Sbjct: 278 EAQTAVDELHDSDFKGQKLFVARAQKKSEREEELRRSYEAAKNEKLAKFQGVNLYLKNIP 337
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
+S DDERLR EF PFG ITS K
Sbjct: 338 ESYDDERLRDEFAPFGAITSCK 359
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 75/189 (39%), Positives = 114/189 (60%), Gaps = 11/189 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV+ KN+D + ++ F+ +G I SC + +DE G SKG+GFV+FE + A +++++
Sbjct: 227 NVYCKNVDADVTDEEFEKLFTKYGKITSCVLQRDEDGKSKGFGFVNFENHDEAQTAVDEL 286
Query: 172 NGMLLNSKIVFVGKFIPRKEREKEL--------GEKAKLF--TNVYIKNFGEDFNDEKLK 221
+ + +FV + + ERE+EL EK F N+Y+KN E ++DE+L+
Sbjct: 287 HDSDFKGQKLFVARAQKKSEREEELRRSYEAAKNEKLAKFQGVNLYLKNIPESYDDERLR 346
Query: 222 EMFEPYGTITSYRVMN-NDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
+ F P+G ITS ++M G SRGFGFV Y +PE A KAV NGK +D + LYV AQ+
Sbjct: 347 DEFAPFGAITSCKIMRAPSGVSRGFGFVCYSAPEEANKAVSEMNGKMLDNRPLYVALAQR 406
Query: 281 KAERTQELK 289
K R Q+L+
Sbjct: 407 KDVRRQQLE 415
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 115/225 (51%), Gaps = 17/225 (7%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSIEK 170
++++ LD S+ +++ F+ G + S +V +D S GY +V+F +++E+
Sbjct: 47 SLYVGELDPSVTEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNFLNAADGERAMEQ 106
Query: 171 VNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTI 230
+N L+ ++ I +R+ L + N++IKN +++ L + F +G I
Sbjct: 107 LNYSLIRNRPC----RIMWSQRDPALRRTGQ--GNIFIKNLDAGIDNKALHDTFAAFGNI 160
Query: 231 TSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKR 290
S +V ++ S G+GFV YE+ E A+ A++ NG ++ K +YVG + R
Sbjct: 161 LSCKVATSESGSLGYGFVHYETAEAADAAIKHVNGMLLNDKKVYVG---------HHIPR 211
Query: 291 RFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSA 335
+ KIE +R + N+Y KN+D + DE K FT +G ITS
Sbjct: 212 KERQAKIEE-SRARFTNVYCKNVDADVTDEEFEKLFTKYGKITSC 255
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 74/126 (58%), Gaps = 18/126 (14%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQ----RDPSLRKS-------------GVGNVFIKNL 118
+ + A+D ++ KG+ + + +Q R+ LR+S GV N+++KN+
Sbjct: 278 EAQTAVDELHDSDFKGQKLFVARAQKKSEREEELRRSYEAAKNEKLAKFQGV-NLYLKNI 336
Query: 119 DKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNS 178
+S D++ + D F+ FG+I SCK+ + G S+G+GFV + E ANK++ ++NG +L++
Sbjct: 337 PESYDDERLRDEFAPFGAITSCKIMRAPSGVSRGFGFVCYSAPEEANKAVSEMNGKMLDN 396
Query: 179 KIVFVG 184
+ ++V
Sbjct: 397 RPLYVA 402
Score = 41.6 bits (96), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 60/135 (44%), Gaps = 18/135 (13%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQ 261
T++Y+ + L E+F G + S RV + +S G+ +V + + E+A++
Sbjct: 46 TSLYVGELDPSVTEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNFLNAADGERAME 105
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDER 321
N + + + +Q R L+R QG N+++KNLD ID++
Sbjct: 106 QLNYSLIRNRPCRIMWSQ----RDPALRRTG-----------QG-NIFIKNLDAGIDNKA 149
Query: 322 LRKEFTPFGTITSAK 336
L F FG I S K
Sbjct: 150 LHDTFAAFGNILSCK 164
>gi|403417917|emb|CCM04617.1| predicted protein [Fibroporia radiculosa]
Length = 671
Score = 307 bits (787), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 151/262 (57%), Positives = 205/262 (78%), Gaps = 1/262 (0%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D ERAL+ +N+ ++KGR RIMWSQRDP+LRK+G GN+FIKNLD+ IDNKA++DTF+AFG
Sbjct: 97 DGERALEQLNYSSIKGRACRIMWSQRDPALRKTGQGNIFIKNLDEQIDNKALHDTFAAFG 156
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
++LSCKVA DE G SKGYGFVH+ET EAA +I+ VNGMLLN K V+VG I RKER+ +
Sbjct: 157 NVLSCKVATDEHGRSKGYGFVHYETAEAAETAIKAVNGMLLNDKKVYVGYHISRKERQSK 216
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPE 254
L E FTN+Y+KNF + +E+ +F+ +G++TS + +D G+SRGFGFV +E +
Sbjct: 217 LEEMKAQFTNIYVKNFDPEVTEEEFMALFQQFGSVTSAVIQRDDEGRSRGFGFVNFEVHD 276
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A+KAV+ + + GK L+V RAQKKAER QEL++ +E K+E+++++QGVNLY+KNL+
Sbjct: 277 EAQKAVEGLHDLDFKGKKLFVSRAQKKAEREQELRQSYEQAKMEKMSKFQGVNLYIKNLE 336
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
D +DD+RLR EF PFG+ITSAK
Sbjct: 337 DDLDDDRLRTEFEPFGSITSAK 358
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 74/197 (37%), Positives = 120/197 (60%), Gaps = 11/197 (5%)
Query: 107 KSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANK 166
K+ N+++KN D + + F FGS+ S + +D++G S+G+GFV+FE + A K
Sbjct: 221 KAQFTNIYVKNFDPEVTEEEFMALFQQFGSVTSAVIQRDDEGRSRGFGFVNFEVHDEAQK 280
Query: 167 SIEKVNGMLLNSKIVFVGKFIPRKEREKELG---EKAKL-------FTNVYIKNFGEDFN 216
++E ++ + K +FV + + ERE+EL E+AK+ N+YIKN +D +
Sbjct: 281 AVEGLHDLDFKGKKLFVSRAQKKAEREQELRQSYEQAKMEKMSKFQGVNLYIKNLEDDLD 340
Query: 217 DEKLKEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYV 275
D++L+ FEP+G+ITS +VM ++ G S+GFGFV + SP+ A KAV N K + K LYV
Sbjct: 341 DDRLRTEFEPFGSITSAKVMRDEKGTSKGFGFVCFSSPDEATKAVAEMNNKMIGTKPLYV 400
Query: 276 GRAQKKAERTQELKRRF 292
AQ++ R Q+L+ +
Sbjct: 401 SLAQRRDVRRQQLESQI 417
Score = 44.7 bits (104), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 61/135 (45%), Gaps = 18/135 (13%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQ 261
++Y+ + L E+F G + S RV + +S G+ +V Y + E+A++
Sbjct: 44 ASLYVGELDPTVTEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNAADGERALE 103
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDER 321
N + G+ + +Q R L++ QG N+++KNLD+ ID++
Sbjct: 104 QLNYSSIKGRACRIMWSQ----RDPALRKTG-----------QG-NIFIKNLDEQIDNKA 147
Query: 322 LRKEFTPFGTITSAK 336
L F FG + S K
Sbjct: 148 LHDTFAAFGNVLSCK 162
>gi|296203566|ref|XP_002748951.1| PREDICTED: polyadenylate-binding protein 1 isoform 2 [Callithrix
jacchus]
Length = 604
Score = 307 bits (786), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 162/276 (58%), Positives = 193/276 (69%), Gaps = 36/276 (13%)
Query: 62 SGAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKS 121
SG V P D ERALDTMNFD + G+ +RIMWSQRDPSLRKSGV
Sbjct: 52 SGYAYVNFQHPK--DAERALDTMNFDVINGKSVRIMWSQRDPSLRKSGV----------- 98
Query: 122 IDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIV 181
C DE G SKGYGFVHFET+EAA ++IEK+NGMLLN + V
Sbjct: 99 -----------------VC----DENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDQKV 136
Query: 182 FVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-G 240
FVG+F RKERE ELG +AK FTNVY+KNFGED +DE LK++F +G S +VM ++ G
Sbjct: 137 FVGRFKSRKEREAELGARAKEFTNVYVKNFGEDMDDEHLKDLFGKFGPTLSVKVMTDERG 196
Query: 241 KSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERL 300
KS+GFGFV++E E A+KAV NGKE+ GK +YVGRAQKK ER ELKR+FE +K +++
Sbjct: 197 KSKGFGFVSFERGEDAQKAVDELNGKELSGKQIYVGRAQKKVERQTELKRKFEQMKQDKI 256
Query: 301 NRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQG+NLYVK LDD IDDERLRKEF+PFGTITSAK
Sbjct: 257 TRYQGLNLYVKYLDDYIDDERLRKEFSPFGTITSAK 292
Score = 154 bits (390), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 100/275 (36%), Positives = 149/275 (54%), Gaps = 31/275 (11%)
Query: 41 LIDGNTVKYDWD--------SGYTCHQLGS---GAILVQLGQPYMLDTERALDTMNFDAL 89
+I+G +V+ W SG C + GS G + + + ERA++ MN L
Sbjct: 76 VINGKSVRIMWSQRDPSLRKSGVVCDENGSKGYGFVHFETQE----AAERAIEKMNGMLL 131
Query: 90 KGRPIRI----MWSQRDPSL--RKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVA 143
+ + + +R+ L R NV++KN + +D++ + D F FG LS KV
Sbjct: 132 NDQKVFVGRFKSRKEREAELGARAKEFTNVYVKNFGEDMDDEHLKDLFGKFGPTLSVKVM 191
Query: 144 QDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLF 203
DE+G SKG+GFV FE E A K+++++NG L+ K ++VG+ + ER+ EL K +
Sbjct: 192 TDERGKSKGFGFVSFERGEDAQKAVDELNGKELSGKQIYVGRAQKKVERQTELKRKFEQM 251
Query: 204 T----------NVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDGKSRGFGFVAYESP 253
N+Y+K + +DE+L++ F P+GTITS +VM G+S+GFGFV + SP
Sbjct: 252 KQDKITRYQGLNLYVKYLDDYIDDERLRKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSP 311
Query: 254 EFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
E A KAV NGK V K LYV AQ+K ER L
Sbjct: 312 EEATKAVTEMNGKIVATKPLYVALAQRKEERQAHL 346
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 108/236 (45%), Gaps = 49/236 (20%)
Query: 102 DPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFET 160
+PS + ++++ +L + +Y+ FS G ILS +V +D S GY +V+F+
Sbjct: 2 NPSTPSYPMTSLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMFTRRSSGYAYVNFQH 61
Query: 161 EEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKL 220
+ A ++++ +N ++N K V I +R+ L +
Sbjct: 62 PKDAERALDTMNFDVINGKSV----RIMWSQRDPSLRKSG-------------------- 97
Query: 221 KEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
V+ ++ S+G+GFV +E+ E AE+A++ NG ++ + ++VGR +
Sbjct: 98 --------------VVCDENGSKGYGFVHFETQEAAERAIEKMNGMLLNDQKVFVGRFKS 143
Query: 281 KAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ ER EL R + N+YVKN + +DDE L+ F FG S K
Sbjct: 144 RKEREAELGARAKEF----------TNVYVKNFGEDMDDEHLKDLFGKFGPTLSVK 189
>gi|344228406|gb|EGV60292.1| hypothetical protein CANTEDRAFT_136776 [Candida tenuis ATCC 10573]
Length = 647
Score = 307 bits (786), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 153/262 (58%), Positives = 203/262 (77%), Gaps = 1/262 (0%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D E+A++ +N+ ++GRP RIMWSQRDPSLR++G GN+FIKNL +IDNKA++DTFSAFG
Sbjct: 104 DGEQAIEDLNYSLIEGRPCRIMWSQRDPSLRRNGEGNIFIKNLHPAIDNKALHDTFSAFG 163
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
ILSCKVA DE GNSK +GFVH+ET EAA +IE VNGMLLN + VFVGK + +K+RE +
Sbjct: 164 RILSCKVATDELGNSKCFGFVHYETAEAAEAAIENVNGMLLNDREVFVGKHVSKKDRESK 223
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTIT-SYRVMNNDGKSRGFGFVAYESPE 254
E FTNV++KN ++ D++LKE+F YG IT SY + +GKS+GFGFV +++
Sbjct: 224 FEEMKANFTNVFVKNLAPEYTDQELKELFSAYGPITSSYLEKDLEGKSKGFGFVNFDNHN 283
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A KAV N KE+ G+ +YVGRAQKK ER +EL+R++E K+E+L++YQGVNL++KNLD
Sbjct: 284 DAVKAVDELNNKEIAGQPIYVGRAQKKRERMEELRRQYEATKLEKLSKYQGVNLFIKNLD 343
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
D+ID E+L EF PFG ITSA+
Sbjct: 344 DTIDSEKLENEFKPFGNITSAR 365
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 76/198 (38%), Positives = 121/198 (61%), Gaps = 11/198 (5%)
Query: 107 KSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANK 166
K+ NVF+KNL ++ + + FSA+G I S + +D +G SKG+GFV+F+ A K
Sbjct: 228 KANFTNVFVKNLAPEYTDQELKELFSAYGPITSSYLEKDLEGKSKGFGFVNFDNHNDAVK 287
Query: 167 SIEKVNGMLLNSKIVFVGKFIPRKEREKELG---EKAKL-------FTNVYIKNFGEDFN 216
+++++N + + ++VG+ ++ER +EL E KL N++IKN + +
Sbjct: 288 AVDELNNKEIAGQPIYVGRAQKKRERMEELRRQYEATKLEKLSKYQGVNLFIKNLDDTID 347
Query: 217 DEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYV 275
EKL+ F+P+G ITS RVM + GKS+GFGFV + SPE A KA+ N + V+GK LYV
Sbjct: 348 SEKLENEFKPFGNITSARVMVDEQGKSKGFGFVCFSSPEEATKAITEMNQRMVEGKPLYV 407
Query: 276 GRAQKKAERTQELKRRFE 293
AQ+K R +L+++ +
Sbjct: 408 ALAQRKDVRRSQLEQQIQ 425
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 71/126 (56%), Gaps = 18/126 (14%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQ----RDPSLRKS-------------GVGNVFIKNL 118
D +A+D +N + G+PI + +Q R LR+ GV N+FIKNL
Sbjct: 284 DAVKAVDELNNKEIAGQPIYVGRAQKKRERMEELRRQYEATKLEKLSKYQGV-NLFIKNL 342
Query: 119 DKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNS 178
D +ID++ + + F FG+I S +V DEQG SKG+GFV F + E A K+I ++N ++
Sbjct: 343 DDTIDSEKLENEFKPFGNITSARVMVDEQGKSKGFGFVCFSSPEEATKAITEMNQRMVEG 402
Query: 179 KIVFVG 184
K ++V
Sbjct: 403 KPLYVA 408
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 119/227 (52%), Gaps = 18/227 (7%)
Query: 111 GNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSIE 169
++++ L+ S++ +++ FS G + S +V +D S GY +V+F + ++IE
Sbjct: 51 ASLYVGELNTSVNEALLFEIFSPIGQVSSIRVCRDAVTKKSLGYAYVNFVKFDDGEQAIE 110
Query: 170 KVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGT 229
+N L+ + + + R + GE N++IKN +++ L + F +G
Sbjct: 111 DLNYSLIEGRPCRI-MWSQRDPSLRRNGE-----GNIFIKNLHPAIDNKALHDTFSAFGR 164
Query: 230 ITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S +V ++ G S+ FGFV YE+ E AE A++ NG ++ + ++VG+ K +R
Sbjct: 165 ILSCKVATDELGNSKCFGFVHYETAEAAEAAIENVNGMLLNDREVFVGKHVSKKDR---- 220
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSA 335
+ +FE +K N++VKNL D+ L++ F+ +G ITS+
Sbjct: 221 ESKFEEMKANF------TNVFVKNLAPEYTDQELKELFSAYGPITSS 261
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 71/151 (47%), Gaps = 24/151 (15%)
Query: 188 PRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGF 245
P KE LGE + ++Y+ N+ L E+F P G ++S RV + KS G+
Sbjct: 41 PAKEN---LGETS---ASLYVGELNTSVNEALLFEIFSPIGQVSSIRVCRDAVTKKSLGY 94
Query: 246 GFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQG 305
+V + + E+A++ N ++G+ + +Q R L+R E
Sbjct: 95 AYVNFVKFDDGEQAIEDLNYSLIEGRPCRIMWSQ----RDPSLRRNGEG----------- 139
Query: 306 VNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
N+++KNL +ID++ L F+ FG I S K
Sbjct: 140 -NIFIKNLHPAIDNKALHDTFSAFGRILSCK 169
>gi|50547639|ref|XP_501289.1| YALI0C00539p [Yarrowia lipolytica]
gi|74689742|sp|Q6CDH3.1|PABP_YARLI RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|49647156|emb|CAG81584.1| YALI0C00539p [Yarrowia lipolytica CLIB122]
Length = 629
Score = 307 bits (786), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 142/262 (54%), Positives = 193/262 (73%), Gaps = 1/262 (0%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D RAL+ +N+ +K RP RIMWSQRDP+LRK+G GN++IKNLD +IDNKA++DTFSAFG
Sbjct: 99 DGIRALEELNYSPIKERPCRIMWSQRDPALRKTGAGNIYIKNLDPAIDNKALHDTFSAFG 158
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
ILSCK+A DE GNS+G+GFVH+E+ E+A +I+ VNGMLLN K VFVG +P+ +R +
Sbjct: 159 QILSCKIATDEFGNSRGFGFVHYESAESAESAIQHVNGMLLNDKKVFVGPHVPKSDRMQS 218
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPE 254
E+ FTNV+IKN G + + + +E+ +G +S + ND GK GFGFV Y+ +
Sbjct: 219 FEEQKNSFTNVFIKNLGTEITEAEFEELVNKFGETSSVHLSTNDEGKPTGFGFVDYKEHD 278
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A KA+ + E G L+ GRA+KK ER EL++++E ++E+LN+YQGVNLY+KNLD
Sbjct: 279 VAVKAIDGLSETEFKGNKLFAGRAKKKYERADELRKQYEASRLEKLNKYQGVNLYIKNLD 338
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
D+IDD++LR EF P GTITSAK
Sbjct: 339 DTIDDDKLRAEFAPHGTITSAK 360
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 75/208 (36%), Positives = 115/208 (55%), Gaps = 11/208 (5%)
Query: 106 RKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAAN 165
+K+ NVFIKNL I + + FG S ++ +++G G+GFV ++ + A
Sbjct: 222 QKNSFTNVFIKNLGTEITEAEFEELVNKFGETSSVHLSTNDEGKPTGFGFVDYKEHDVAV 281
Query: 166 KSIEKVNGMLLNSKIVFVGKFIPRKEREKELG---EKAKL-------FTNVYIKNFGEDF 215
K+I+ ++ +F G+ + ER EL E ++L N+YIKN +
Sbjct: 282 KAIDGLSETEFKGNKLFAGRAKKKYERADELRKQYEASRLEKLNKYQGVNLYIKNLDDTI 341
Query: 216 NDEKLKEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILY 274
+D+KL+ F P+GTITS +VM ++ GKS+GFGFV Y SPE A KAV N + V GK LY
Sbjct: 342 DDDKLRAEFAPHGTITSAKVMVDEAGKSKGFGFVCYSSPEEATKAVTEMNHRLVAGKPLY 401
Query: 275 VGRAQKKAERTQELKRRFEMLKIERLNR 302
V AQ+K R +L+++ + RL +
Sbjct: 402 VVLAQRKDVRRSQLQQQIQAKNQMRLQQ 429
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 114/232 (49%), Gaps = 32/232 (13%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSIEK 170
++++ LD S+ +++ F+ G + S +V +D S GY +V+F + +++E+
Sbjct: 47 SLYVGELDPSVTEAMLFEIFNPIGPVTSVRVCRDAITRRSLGYAYVNFHNQADGIRALEE 106
Query: 171 VNGMLLNSKIVFVGKFIPRKER-------EKELGEKAKLFTNVYIKNFGEDFNDEKLKEM 223
+N + P KER +++ + N+YIKN +++ L +
Sbjct: 107 LN-------------YSPIKERPCRIMWSQRDPALRKTGAGNIYIKNLDPAIDNKALHDT 153
Query: 224 FEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKA 282
F +G I S ++ ++ G SRGFGFV YES E AE A+Q NG ++ K ++VG K+
Sbjct: 154 FSAFGQILSCKIATDEFGNSRGFGFVHYESAESAESAIQHVNGMLLNDKKVFVGPHVPKS 213
Query: 283 ERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITS 334
+R Q + E+ N + N+++KNL I + + FG +S
Sbjct: 214 DRMQSFE--------EQKNSF--TNVFIKNLGTEITEAEFEELVNKFGETSS 255
Score = 45.1 bits (105), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 59/135 (43%), Gaps = 18/135 (13%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQ 261
++Y+ + L E+F P G +TS RV + +S G+ +V + + +A++
Sbjct: 46 ASLYVGELDPSVTEAMLFEIFNPIGPVTSVRVCRDAITRRSLGYAYVNFHNQADGIRALE 105
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDER 321
N + + + +Q+ L + N+Y+KNLD +ID++
Sbjct: 106 ELNYSPIKERPCRIMWSQRDPA----------------LRKTGAGNIYIKNLDPAIDNKA 149
Query: 322 LRKEFTPFGTITSAK 336
L F+ FG I S K
Sbjct: 150 LHDTFSAFGQILSCK 164
>gi|297841929|ref|XP_002888846.1| hypothetical protein ARALYDRAFT_339396 [Arabidopsis lyrata subsp.
lyrata]
gi|297334687|gb|EFH65105.1| hypothetical protein ARALYDRAFT_339396 [Arabidopsis lyrata subsp.
lyrata]
Length = 685
Score = 307 bits (786), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 148/262 (56%), Positives = 191/262 (72%), Gaps = 1/262 (0%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D RA+D++N+ ++ RPIRIM S RDPS R SG GNVFIKNLD SIDNKA+Y+TFSAFG
Sbjct: 110 DASRAMDSLNYAPIRDRPIRIMLSNRDPSTRLSGKGNVFIKNLDPSIDNKALYETFSAFG 169
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCKVA D G SKGYGFV FE EE A +I+K+NGMLLN K VFVG F+ R++R +
Sbjct: 170 TILSCKVAMDAVGRSKGYGFVQFEKEETAQAAIDKLNGMLLNDKQVFVGHFVRRQDRSRS 229
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPE 254
FTNVY+KN ++ D++LK+ F YG I+S VM + G SR FGFV +ESPE
Sbjct: 230 ESGAVPRFTNVYVKNLPKEITDDELKKTFGKYGDISSAVVMKDQSGNSRSFGFVNFESPE 289
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A AV+ NG + +LYVGRAQKK+ER +EL+R+FE +I R + QG NLY+KNLD
Sbjct: 290 AAAVAVEKMNGISLGEDVLYVGRAQKKSEREEELRRKFEQERISRFEKLQGSNLYLKNLD 349
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
DS++DE+L++ F+ +G +TS K
Sbjct: 350 DSVNDEKLKEMFSEYGNVTSCK 371
Score = 164 bits (414), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 88/196 (44%), Positives = 124/196 (63%), Gaps = 11/196 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV++KNL K I + + TF +G I S V +D+ GNS+ +GFV+FE+ EAA ++EK+
Sbjct: 239 NVYVKNLPKEITDDELKKTFGKYGDISSAVVMKDQSGNSRSFGFVNFESPEAAAVAVEKM 298
Query: 172 NGMLLNSKIVFVGKFIPRKEREKEL-----GEKAKLF-----TNVYIKNFGEDFNDEKLK 221
NG+ L +++VG+ + ERE+EL E+ F +N+Y+KN + NDEKLK
Sbjct: 299 NGISLGEDVLYVGRAQKKSEREEELRRKFEQERISRFEKLQGSNLYLKNLDDSVNDEKLK 358
Query: 222 EMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
EMF YG +TS +VM N+ G SRGFGFVAY SPE A +A+ NGK + K LYV AQ+
Sbjct: 359 EMFSEYGNVTSCKVMMNSQGLSRGFGFVAYSSPEEASRALSEMNGKMIGRKPLYVAFAQR 418
Query: 281 KAERTQELKRRFEMLK 296
K ER L+ F ++
Sbjct: 419 KEERRAHLQTLFTHIR 434
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 120/225 (53%), Gaps = 17/225 (7%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
++++ +LD S+D + D F+ + + +V +D S GY +V+F E A+++++ +
Sbjct: 59 SLYVGDLDPSVDEPQLLDLFNQVAPVQTVRVCRDLTRRSLGYAYVNFANPEDASRAMDSL 118
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTIT 231
N + + + + + ++ L K NV+IKN +++ L E F +GTI
Sbjct: 119 NYAPIRDRPIRI--MLSNRDPSTRLSGKG----NVFIKNLDPSIDNKALYETFSAFGTIL 172
Query: 232 SYRV-MNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKR 290
S +V M+ G+S+G+GFV +E E A+ A+ NG ++ K ++VG ++ +R+
Sbjct: 173 SCKVAMDAVGRSKGYGFVQFEKEETAQAAIDKLNGMLLNDKQVFVGHFVRRQDRS----- 227
Query: 291 RFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSA 335
R E + R N+YVKNL I D+ L+K F +G I+SA
Sbjct: 228 RSESGAVPRF-----TNVYVKNLPKEITDDELKKTFGKYGDISSA 267
>gi|18402769|ref|NP_564554.1| poly(A) binding protein 8 [Arabidopsis thaliana]
gi|334183191|ref|NP_001185184.1| poly(A) binding protein 8 [Arabidopsis thaliana]
gi|10120431|gb|AAG13056.1|AC011807_15 Putative Poly-A Binding Protein [Arabidopsis thaliana]
gi|13877633|gb|AAK43894.1|AF370517_1 Putative Poly-A Binding Protein [Arabidopsis thaliana]
gi|17978685|gb|AAL47336.1| putative Poly-A Binding Protein [Arabidopsis thaliana]
gi|332194351|gb|AEE32472.1| poly(A) binding protein 8 [Arabidopsis thaliana]
gi|332194352|gb|AEE32473.1| poly(A) binding protein 8 [Arabidopsis thaliana]
Length = 671
Score = 306 bits (785), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 153/262 (58%), Positives = 199/262 (75%), Gaps = 3/262 (1%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D RAL+ +NF AL GR IR+M+S RDPSLRKSGVGN+FIKNLDKSID+KA+++TFSAFG
Sbjct: 98 DASRALNELNFMALNGRAIRVMYSVRDPSLRKSGVGNIFIKNLDKSIDHKALHETFSAFG 157
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
ILSCKVA D G SKGYGFV ++T+EAA +I+K+NGMLLN K V+VG F+ + +R+
Sbjct: 158 PILSCKVAVDPSGQSKGYGFVQYDTDEAAQGAIDKLNGMLLNDKQVYVGPFVHKLQRDPS 217
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPE 254
GEK K FTNVY+KN E +DE+L ++F +G TS +M + +GKS+GFGFV +E+ +
Sbjct: 218 -GEKVK-FTNVYVKNLSESLSDEELNKVFGEFGVTTSCVIMRDGEGKSKGFGFVNFENSD 275
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A +AV A NGK D K +VG+AQKK+ER ELK++FE E ++ QG NLYVKNLD
Sbjct: 276 DAARAVDALNGKTFDDKEWFVGKAQKKSERETELKQKFEQSLKEAADKSQGSNLYVKNLD 335
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
+S+ D++LR+ F PFGTITS K
Sbjct: 336 ESVTDDKLREHFAPFGTITSCK 357
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 84/208 (40%), Positives = 124/208 (59%), Gaps = 11/208 (5%)
Query: 100 QRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFE 159
QRDPS K NV++KNL +S+ ++ + F FG SC + +D +G SKG+GFV+FE
Sbjct: 213 QRDPSGEKVKFTNVYVKNLSESLSDEELNKVFGEFGVTTSCVIMRDGEGKSKGFGFVNFE 272
Query: 160 TEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEK----------AKLFTNVYIK 209
+ A ++++ +NG + K FVGK + ERE EL +K +N+Y+K
Sbjct: 273 NSDDAARAVDALNGKTFDDKEWFVGKAQKKSERETELKQKFEQSLKEAADKSQGSNLYVK 332
Query: 210 NFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGKSRGFGFVAYESPEFAEKAVQAWNGKEV 268
N E D+KL+E F P+GTITS +VM + G SRG GFVA+ +PE A +A+ NGK +
Sbjct: 333 NLDESVTDDKLREHFAPFGTITSCKVMRDPSGVSRGSGFVAFSTPEEATRAITEMNGKMI 392
Query: 269 DGKILYVGRAQKKAERTQELKRRFEMLK 296
K LYV AQ+K +R L+ +F ++
Sbjct: 393 VTKPLYVALAQRKEDRKARLQAQFSQMR 420
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 69/231 (29%), Positives = 125/231 (54%), Gaps = 20/231 (8%)
Query: 107 KSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQD-EQGNSKGYGFVHFETEEAAN 165
+ G ++++ +LD ++ + +++ F+ G ++S +V +D S GYG+V++ T + A+
Sbjct: 41 QQGTTSLYVGDLDATVTDSQLFEAFTQAGQVVSVRVCRDMTTRRSLGYGYVNYATPQDAS 100
Query: 166 KSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFE 225
+++ ++N M LN + + V + R+ L + N++IKN + + + L E F
Sbjct: 101 RALNELNFMALNGRAIRVMYSV----RDPSLRKSG--VGNIFIKNLDKSIDHKALHETFS 154
Query: 226 PYGTITSYRV-MNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAER 284
+G I S +V ++ G+S+G+GFV Y++ E A+ A+ NG ++ K +YVG K +R
Sbjct: 155 AFGPILSCKVAVDPSGQSKGYGFVQYDTDEAAQGAIDKLNGMLLNDKQVYVGPFVHKLQR 214
Query: 285 TQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSA 335
E +K N+YVKNL +S+ DE L K F FG TS
Sbjct: 215 DPS----GEKVKF--------TNVYVKNLSESLSDEELNKVFGEFGVTTSC 253
>gi|354466116|ref|XP_003495521.1| PREDICTED: polyadenylate-binding protein 4-like [Cricetulus
griseus]
gi|344243583|gb|EGV99686.1| Polyadenylate-binding protein 4-like [Cricetulus griseus]
Length = 370
Score = 306 bits (785), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 148/262 (56%), Positives = 196/262 (74%), Gaps = 2/262 (0%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D ++ALDTMNFD ++G+ IR+MWSQRD LRKSG+GNVFIKNLDKSIDNK +Y+ FS FG
Sbjct: 63 DAQKALDTMNFDLIQGKSIRLMWSQRDAYLRKSGIGNVFIKNLDKSIDNKTLYEHFSPFG 122
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
ILS KV DE+G S+GYGFVH++ + AA+++IE++NG LL VFV +F RK+RE E
Sbjct: 123 KILSSKVMSDEEG-SRGYGFVHYQDQSAADRAIEEMNGKLLRDCTVFVDRFKSRKDREAE 181
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPE 254
L K FTNVYIKN G++ +DE LK +F YG S +VM +D GKS+GFGFV++ + E
Sbjct: 182 LRSKTSEFTNVYIKNLGDNMDDEGLKNIFSKYGQTLSVKVMKDDNGKSKGFGFVSFYNHE 241
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A AV+ NG++++G+ ++VGRAQKK ER ELK +FE +K ER+ Q LY+KNLD
Sbjct: 242 AARNAVEEMNGQDINGQTIFVGRAQKKVERQAELKEKFEQMKKERIRARQAAKLYIKNLD 301
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
++IDDE LR+EF+ FG+I K
Sbjct: 302 ETIDDETLRREFSSFGSICRVK 323
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 79/220 (35%), Positives = 122/220 (55%), Gaps = 16/220 (7%)
Query: 77 TERALDTMNFDALKGRPIRI----MWSQRDPSLRK--SGVGNVFIKNLDKSIDNKAMYDT 130
+RA++ MN L+ + + R+ LR S NV+IKNL ++D++ + +
Sbjct: 150 ADRAIEEMNGKLLRDCTVFVDRFKSRKDREAELRSKTSEFTNVYIKNLGDNMDDEGLKNI 209
Query: 131 FSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRK 190
FS +G LS KV +D+ G SKG+GFV F EAA ++E++NG +N + +FVG+ +
Sbjct: 210 FSKYGQTLSVKVMKDDNGKSKGFGFVSFYNHEAARNAVEEMNGQDINGQTIFVGRAQKKV 269
Query: 191 EREKELGEK----------AKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDG 240
ER+ EL EK A+ +YIKN E +DE L+ F +G+I +VM G
Sbjct: 270 ERQAELKEKFEQMKKERIRARQAAKLYIKNLDETIDDETLRREFSSFGSICRVKVMQEAG 329
Query: 241 KSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
+S+GFG + + SPE A KA+ NG+ + K L + QK
Sbjct: 330 QSKGFGLICFFSPEAAAKAMAEMNGRILGSKALNIALGQK 369
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 121/228 (53%), Gaps = 17/228 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQD-EQGNSKGYGFVHFETEEAANKSI 168
++++ +L + + ++ F+ G +LS ++ +D S GY +V+F + A K++
Sbjct: 9 AASLYVGDLHEDVTEDVLFRKFNTVGPVLSIRICRDLVSRRSLGYAYVNFLQLDDAQKAL 68
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N L+ GK I +++ + NV+IKN + +++ L E F P+G
Sbjct: 69 DTMNFDLIQ------GKSIRLMWSQRDAYLRKSGIGNVFIKNLDKSIDNKTLYEHFSPFG 122
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S +VM+++ SRG+GFV Y+ A++A++ NGK + ++V R + + +R EL
Sbjct: 123 KILSSKVMSDEEGSRGYGFVHYQDQSAADRAIEEMNGKLLRDCTVFVDRFKSRKDREAEL 182
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ + + N+Y+KNL D++DDE L+ F+ +G S K
Sbjct: 183 RSKTS----------EFTNVYIKNLGDNMDDEGLKNIFSKYGQTLSVK 220
>gi|224137600|ref|XP_002327166.1| predicted protein [Populus trichocarpa]
gi|222835481|gb|EEE73916.1| predicted protein [Populus trichocarpa]
Length = 632
Score = 306 bits (785), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 150/262 (57%), Positives = 200/262 (76%), Gaps = 3/262 (1%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D RALD +NF L +PIRIM+S RDPS+RKSG+ N+FIKNLDK ID+KA++DTFS+FG
Sbjct: 65 DAARALDVLNFTPLNNKPIRIMYSHRDPSIRKSGMANIFIKNLDKGIDHKALHDTFSSFG 124
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCKVA D G SKGYGFV F++EEAA +I+K+NGML+N K V+VG F+ +++R+
Sbjct: 125 NILSCKVATDASGQSKGYGFVQFDSEEAAQNAIDKLNGMLVNDKQVYVGHFLRKQDRDGA 184
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGKSRGFGFVAYESPE 254
L + F NV++KN E DE+LK +F +G ITS VM + DGKS+ FGFV +ES +
Sbjct: 185 L--YSIKFNNVFVKNLAESTTDEELKNIFAEHGAITSAVVMRDADGKSKCFGFVNFESAD 242
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A KAV+A NGK++DG+ YVG+AQKK+ER ELK RFE E ++++QG+NLY+KNLD
Sbjct: 243 DAAKAVEALNGKKIDGEEWYVGKAQKKSERELELKGRFEQSMKETVDKFQGLNLYIKNLD 302
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
DSI+DE+L++ F+ FG ITS K
Sbjct: 303 DSINDEKLKELFSDFGAITSCK 324
Score = 140 bits (354), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 84/207 (40%), Positives = 122/207 (58%), Gaps = 11/207 (5%)
Query: 101 RDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFET 160
RD +L NVF+KNL +S ++ + + F+ G+I S V +D G SK +GFV+FE+
Sbjct: 181 RDGALYSIKFNNVFVKNLAESTTDEELKNIFAEHGAITSAVVMRDADGKSKCFGFVNFES 240
Query: 161 EEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELG--------EKAKLFT--NVYIKN 210
+ A K++E +NG ++ + +VGK + ERE EL E F N+YIKN
Sbjct: 241 ADDAAKAVEALNGKKIDGEEWYVGKAQKKSERELELKGRFEQSMKETVDKFQGLNLYIKN 300
Query: 211 FGEDFNDEKLKEMFEPYGTITSYRVMNN-DGKSRGFGFVAYESPEFAEKAVQAWNGKEVD 269
+ NDEKLKE+F +G ITS +VM + G SRG GFVA+ +PE A +A+ NGK +
Sbjct: 301 LDDSINDEKLKELFSDFGAITSCKVMRDPSGISRGSGFVAFSTPEEASRALAEMNGKMLI 360
Query: 270 GKILYVGRAQKKAERTQELKRRFEMLK 296
K LYV AQ+K ER L+ +F ++
Sbjct: 361 SKPLYVALAQRKEERRARLQAQFSQMR 387
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 121/227 (53%), Gaps = 22/227 (9%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQD-EQGNSKGYGFVHFETEEAANKSIEK 170
++++ +LD ++ + +YD F+ G ++S +V +D S GYG+V++ + A ++++
Sbjct: 13 SLYVGDLDFNVTDSQLYDVFNQVGQVVSVRVCRDLSTRRSLGYGYVNYSNPQDAARALDV 72
Query: 171 VNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTI 230
+N LN+K + + + R ++ G N++IKN + + + L + F +G I
Sbjct: 73 LNFTPLNNKPIRI-MYSHRDPSIRKSG-----MANIFIKNLDKGIDHKALHDTFSSFGNI 126
Query: 231 TSYRVMNN-DGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELK 289
S +V + G+S+G+GFV ++S E A+ A+ NG V+ K +YVG +K +R L
Sbjct: 127 LSCKVATDASGQSKGYGFVQFDSEEAAQNAIDKLNGMLVNDKQVYVGHFLRKQDRDGALY 186
Query: 290 R-RFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSA 335
+F N++VKNL +S DE L+ F G ITSA
Sbjct: 187 SIKFN-------------NVFVKNLAESTTDEELKNIFAEHGAITSA 220
>gi|386780450|dbj|BAM15222.1| poly(A)-binding protein [Nicotiana tabacum]
Length = 657
Score = 306 bits (784), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 148/262 (56%), Positives = 199/262 (75%), Gaps = 3/262 (1%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D RA++ +NF + G+ IR+M+S RDP+LRKSG N+FIKNLDKSIDNKA++DTFS+FG
Sbjct: 91 DASRAMEMLNFTPVNGKSIRVMYSHRDPTLRKSGSANIFIKNLDKSIDNKALHDTFSSFG 150
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCK+A D G SKGYGFV ++ EE+A +I+K+NGML+N K V+VG F+ ++ERE
Sbjct: 151 NILSCKIATDSNGQSKGYGFVQYDNEESAQGAIDKLNGMLMNDKQVYVGHFLRKQEREST 210
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGKSRGFGFVAYESPE 254
G F NVY+KN E D++LK++F +G ITS VM + DGKS+ FGF+ +E+ E
Sbjct: 211 TGMTK--FQNVYVKNLSESTTDDELKKVFGEFGNITSAVVMRDADGKSKCFGFINFETAE 268
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A KAV++ NGK+ D K YVG+AQKK+ER QELK +FE E +++YQG+NLYVKNLD
Sbjct: 269 DAAKAVESLNGKKFDDKEWYVGKAQKKSEREQELKSKFEQTAKEAVDKYQGLNLYVKNLD 328
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
D+IDDE+L++ F+ FGTITS K
Sbjct: 329 DTIDDEKLKELFSEFGTITSCK 350
Score = 141 bits (356), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 81/196 (41%), Positives = 117/196 (59%), Gaps = 11/196 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV++KNL +S + + F FG+I S V +D G SK +GF++FET E A K++E +
Sbjct: 218 NVYVKNLSESTTDDELKKVFGEFGNITSAVVMRDADGKSKCFGFINFETAEDAAKAVESL 277
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLFT----------NVYIKNFGEDFNDEKLK 221
NG + K +VGK + ERE+EL K + N+Y+KN + +DEKLK
Sbjct: 278 NGKKFDDKEWYVGKAQKKSEREQELKSKFEQTAKEAVDKYQGLNLYVKNLDDTIDDEKLK 337
Query: 222 EMFEPYGTITSYRVMNN-DGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
E+F +GTITS +VM + G SRG GFVA+ + E A +A+ NGK + K LYV AQ+
Sbjct: 338 ELFSEFGTITSCKVMRDPSGISRGSGFVAFSTSEEASRALSEMNGKMIVSKPLYVALAQR 397
Query: 281 KAERTQELKRRFEMLK 296
K ER +L+ +F L+
Sbjct: 398 KEERRAKLQAQFSQLR 413
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 125/226 (55%), Gaps = 20/226 (8%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQD-EQGNSKGYGFVHFETEEAANKSIEK 170
++++ +L+ ++ + +YD F+ G ++S +V +D S GYG+V++ A++++E
Sbjct: 39 SLYVGDLEFNVTDSQLYDLFNQVGQVVSVRVCRDLSTRRSLGYGYVNYSNPNDASRAMEM 98
Query: 171 VNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTI 230
+N +N K + V R+ L + N++IKN + +++ L + F +G I
Sbjct: 99 LNFTPVNGKSIRVM----YSHRDPTLRKSGS--ANIFIKNLDKSIDNKALHDTFSSFGNI 152
Query: 231 TSYRV-MNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELK 289
S ++ +++G+S+G+GFV Y++ E A+ A+ NG ++ K +YVG +K ER
Sbjct: 153 LSCKIATDSNGQSKGYGFVQYDNEESAQGAIDKLNGMLMNDKQVYVGHFLRKQERE---- 208
Query: 290 RRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSA 335
+ ++Q N+YVKNL +S D+ L+K F FG ITSA
Sbjct: 209 ------STTGMTKFQ--NVYVKNLSESTTDDELKKVFGEFGNITSA 246
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 66/135 (48%), Gaps = 18/135 (13%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQ 261
T++Y+ + + D +L ++F G + S RV + +S G+G+V Y +P A +A++
Sbjct: 38 TSLYVGDLEFNVTDSQLYDLFNQVGQVVSVRVCRDLSTRRSLGYGYVNYSNPNDASRAME 97
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDER 321
N V+GK + V + + L + N+++KNLD SID++
Sbjct: 98 MLNFTPVNGKSIRVMYSHRDPT----------------LRKSGSANIFIKNLDKSIDNKA 141
Query: 322 LRKEFTPFGTITSAK 336
L F+ FG I S K
Sbjct: 142 LHDTFSSFGNILSCK 156
>gi|357154719|ref|XP_003576878.1| PREDICTED: polyadenylate-binding protein 2-like [Brachypodium
distachyon]
Length = 653
Score = 306 bits (784), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 153/262 (58%), Positives = 191/262 (72%), Gaps = 3/262 (1%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D RAL+ +NF + GRPIRIM+S RDPSLRKSG N+FIKNLDKSIDNKA+YDTF FG
Sbjct: 87 DAARALEMLNFTPINGRPIRIMYSNRDPSLRKSGTANIFIKNLDKSIDNKALYDTFCVFG 146
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCKVA D G SKGYGFV +E +EAA+ +IEK+NGML+N K V+VG FI ++ER+
Sbjct: 147 NILSCKVATDASGESKGYGFVQYERDEAAHAAIEKLNGMLMNDKKVYVGPFIRKQERDNS 206
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPE 254
G F NV++KN E ++ L+E+F +GTITS VM DG+S+ FGFV +ESP+
Sbjct: 207 PGNVK--FNNVFVKNLSETTTEDDLREIFGKFGTITSVVVMREGDGRSKCFGFVNFESPD 264
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A AVQ NGK+ D K YVGRAQKK+ER ELK +FE E ++YQ NLY+KNLD
Sbjct: 265 EAALAVQDLNGKKFDDKEWYVGRAQKKSEREMELKEKFEKNLQETADKYQNTNLYLKNLD 324
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
D++DDE+LR+ F FG ITS K
Sbjct: 325 DTVDDEKLRELFAEFGAITSCK 346
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/212 (38%), Positives = 123/212 (58%), Gaps = 11/212 (5%)
Query: 96 IMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGF 155
I +RD S NVF+KNL ++ + + F FG+I S V ++ G SK +GF
Sbjct: 198 IRKQERDNSPGNVKFNNVFVKNLSETTTEDDLREIFGKFGTITSVVVMREGDGRSKCFGF 257
Query: 156 VHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEK--------AKLF--TN 205
V+FE+ + A +++ +NG + K +VG+ + ERE EL EK A + TN
Sbjct: 258 VNFESPDEAALAVQDLNGKKFDDKEWYVGRAQKKSEREMELKEKFEKNLQETADKYQNTN 317
Query: 206 VYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPEFAEKAVQAWN 264
+Y+KN + +DEKL+E+F +G ITS +VM +++G SRG GFVA++S E A +A+ N
Sbjct: 318 LYLKNLDDTVDDEKLRELFAEFGAITSCKVMRDSNGASRGSGFVAFKSAEDASRALAEMN 377
Query: 265 GKEVDGKILYVGRAQKKAERTQELKRRFEMLK 296
K V K LYV AQ+K +R L+ +F L+
Sbjct: 378 NKMVGSKPLYVALAQRKEDRKARLQAQFSQLR 409
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 119/226 (52%), Gaps = 22/226 (9%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQD-EQGNSKGYGFVHFETEEAANKSIEK 170
++++ +LD S+ + ++D F+ G ++S +V +D S GY +V++ T A +++E
Sbjct: 35 SLYVGDLDMSVQDAQLFDVFAQIGGVVSVRVCRDVTTRKSLGYAYVNYNTPADAARALEM 94
Query: 171 VNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTI 230
+N +N + + I R+ L + N++IKN + +++ L + F +G I
Sbjct: 95 LNFTPINGRPI----RIMYSNRDPSLRKSGT--ANIFIKNLDKSIDNKALYDTFCVFGNI 148
Query: 231 TSYRVMNN-DGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELK 289
S +V + G+S+G+GFV YE E A A++ NG ++ K +YVG +K ER
Sbjct: 149 LSCKVATDASGESKGYGFVQYERDEAAHAAIEKLNGMLMNDKKVYVGPFIRKQERDNSPG 208
Query: 290 R-RFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITS 334
+F N++VKNL ++ ++ LR+ F FGTITS
Sbjct: 209 NVKFN-------------NVFVKNLSETTTEDDLREIFGKFGTITS 241
>gi|326516828|dbj|BAJ96406.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 744
Score = 306 bits (784), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 153/262 (58%), Positives = 192/262 (73%), Gaps = 3/262 (1%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D RAL+ +NF + GRPIRIM+S RDPSLRKSG N+FIKNLDKSIDNKA++DTF FG
Sbjct: 178 DAARALEMLNFTPINGRPIRIMYSNRDPSLRKSGTANIFIKNLDKSIDNKALHDTFCVFG 237
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCKVA D G SKGYGFV +E +EAA+ +IEK+NGML+N K V+VG F+ ++ER+
Sbjct: 238 NILSCKVATDPAGESKGYGFVQYERDEAAHAAIEKLNGMLMNDKKVYVGPFVRKQERDNS 297
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPE 254
G F NVY+KN E ++ LKE+F +GTITS VM + DG+S+ FGFV +ESP+
Sbjct: 298 PGSVK--FNNVYVKNLAETTTEDDLKEIFGKFGTITSVVVMRDGDGRSKCFGFVNFESPD 355
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A AVQ NGK+ K YVGRAQKK+ER ELK +FE E ++YQ NLY+KNLD
Sbjct: 356 EAALAVQDLNGKKFSDKEWYVGRAQKKSEREMELKEKFEKNLQEAADKYQNTNLYLKNLD 415
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
D++DDE+LR+ F FGTITS K
Sbjct: 416 DTVDDEKLRELFAEFGTITSCK 437
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 79/208 (37%), Positives = 123/208 (59%), Gaps = 11/208 (5%)
Query: 100 QRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFE 159
+RD S NV++KNL ++ + + F FG+I S V +D G SK +GFV+FE
Sbjct: 293 ERDNSPGSVKFNNVYVKNLAETTTEDDLKEIFGKFGTITSVVVMRDGDGRSKCFGFVNFE 352
Query: 160 TEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEK--------AKLF--TNVYIK 209
+ + A +++ +NG + K +VG+ + ERE EL EK A + TN+Y+K
Sbjct: 353 SPDEAALAVQDLNGKKFSDKEWYVGRAQKKSEREMELKEKFEKNLQEAADKYQNTNLYLK 412
Query: 210 NFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPEFAEKAVQAWNGKEV 268
N + +DEKL+E+F +GTITS +VM +++G SRG GFVA++S + A +A+ N K V
Sbjct: 413 NLDDTVDDEKLRELFAEFGTITSCKVMRDSNGASRGSGFVAFKSADDASRALAEMNNKMV 472
Query: 269 DGKILYVGRAQKKAERTQELKRRFEMLK 296
K LYV AQ+K +R L+ +F ++
Sbjct: 473 GNKPLYVALAQRKEDRKARLQAQFSQMR 500
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 119/226 (52%), Gaps = 22/226 (9%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQG-NSKGYGFVHFETEEAANKSIEK 170
++++ +LD S+ + ++D F+ G ++S +V +D S GY +V++ T A +++E
Sbjct: 126 SLYVGDLDVSVQDAQLFDVFAQIGGVVSVRVCRDVTSRKSLGYAYVNYNTPADAARALEM 185
Query: 171 VNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTI 230
+N +N + + I R+ L + N++IKN + +++ L + F +G I
Sbjct: 186 LNFTPINGRPI----RIMYSNRDPSLRKSGT--ANIFIKNLDKSIDNKALHDTFCVFGNI 239
Query: 231 TSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELK 289
S +V + G+S+G+GFV YE E A A++ NG ++ K +YVG +K ER
Sbjct: 240 LSCKVATDPAGESKGYGFVQYERDEAAHAAIEKLNGMLMNDKKVYVGPFVRKQERDNSPG 299
Query: 290 R-RFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITS 334
+F N+YVKNL ++ ++ L++ F FGTITS
Sbjct: 300 SVKFN-------------NVYVKNLAETTTEDDLKEIFGKFGTITS 332
>gi|332208761|ref|XP_003253477.1| PREDICTED: polyadenylate-binding protein 1-like [Nomascus
leucogenys]
Length = 590
Score = 306 bits (783), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 147/230 (63%), Positives = 180/230 (78%), Gaps = 2/230 (0%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D ERALDTMNF+ LKG+PIRIMWSQRDP LRKSGVGN+FIKNL+ SIDNKA+YDTFS FG
Sbjct: 64 DAERALDTMNFEMLKGQPIRIMWSQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFG 123
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCKVA DE G S+G+GFVHFET EAA ++I +NGMLLN + VFVG F R+ERE E
Sbjct: 124 NILSCKVACDEHG-SRGFGFVHFETHEAAQQAINTMNGMLLNDRKVFVGHFKSRREREAE 182
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPE 254
LG +A FTN+Y+KN D +++ L+++F +G + S +VM +N G SR FGFV +E E
Sbjct: 183 LGARALEFTNIYVKNLPVDVDEQGLQDLFSQFGKMLSVKVMRDNSGHSRCFGFVNFEKHE 242
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQ 304
A+KAV NGKEV G++LY GRAQK+ ER ELKRRFE +K +RL RYQ
Sbjct: 243 EAQKAVVHMNGKEVSGRLLYAGRAQKRMERQNELKRRFEQMKQDRLRRYQ 292
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 120/228 (52%), Gaps = 17/228 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQD-EQGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + +Y+ FS G ILS +V +D S GY +++F+ A +++
Sbjct: 10 LASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDVATRRSLGYAYINFQQPADAERAL 69
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N +L + + + +++ G + N++IKN + +++ L + F +G
Sbjct: 70 DTMNFEMLKGQPIRI------MWSQRDPGLRKSGVGNIFIKNLEDSIDNKALYDTFSTFG 123
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S +V ++ SRGFGFV +E+ E A++A+ NG ++ + ++VG + + ER EL
Sbjct: 124 NILSCKVACDEHGSRGFGFVHFETHEAAQQAINTMNGMLLNDRKVFVGHFKSRREREAEL 183
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
R + N+YVKNL +D++ L+ F+ FG + S K
Sbjct: 184 GAR----------ALEFTNIYVKNLPVDVDEQGLQDLFSQFGKMLSVK 221
>gi|302754900|ref|XP_002960874.1| hypothetical protein SELMODRAFT_21095 [Selaginella moellendorffii]
gi|302767436|ref|XP_002967138.1| hypothetical protein SELMODRAFT_10868 [Selaginella moellendorffii]
gi|300165129|gb|EFJ31737.1| hypothetical protein SELMODRAFT_10868 [Selaginella moellendorffii]
gi|300171813|gb|EFJ38413.1| hypothetical protein SELMODRAFT_21095 [Selaginella moellendorffii]
Length = 619
Score = 306 bits (783), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 150/262 (57%), Positives = 197/262 (75%), Gaps = 6/262 (2%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D RAL+ +NF + G+ +RIM+S RDPS+RKSG N+FIKNLD++IDNKA++DTF +FG
Sbjct: 57 DATRALELLNFTPVNGKAVRIMFSHRDPSIRKSGTANIFIKNLDRAIDNKALHDTFVSFG 116
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCKVA D G SKGYGFV FE EE+A +I+KVNGML+ K VFVG F+ R+ERE+
Sbjct: 117 NILSCKVATDSNGQSKGYGFVQFEQEESAQVAIDKVNGMLVAEKQVFVGPFVRRQEREQN 176
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPE 254
F NV++KN GE D++LKE+F +G ITS VM ++DGKS+ FGFV +E+P+
Sbjct: 177 -----GKFNNVFVKNLGESTTDDELKEVFGAFGKITSAVVMRDSDGKSKCFGFVNFENPD 231
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A KAV NGK+++ K YVGRAQKK+ER EL+ ++E + ER++RYQG NLY+KNLD
Sbjct: 232 EAAKAVVGLNGKKIEDKEWYVGRAQKKSEREAELRAKYEQERKERIDRYQGANLYLKNLD 291
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
D +DDERLR+ F FG+ITS K
Sbjct: 292 DDVDDERLREIFADFGSITSCK 313
Score = 137 bits (346), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 77/196 (39%), Positives = 117/196 (59%), Gaps = 11/196 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NVF+KNL +S + + + F AFG I S V +D G SK +GFV+FE + A K++ +
Sbjct: 181 NVFVKNLGESTTDDELKEVFGAFGKITSAVVMRDSDGKSKCFGFVNFENPDEAAKAVVGL 240
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKL----------FTNVYIKNFGEDFNDEKLK 221
NG + K +VG+ + ERE EL K + N+Y+KN +D +DE+L+
Sbjct: 241 NGKKIEDKEWYVGRAQKKSEREAELRAKYEQERKERIDRYQGANLYLKNLDDDVDDERLR 300
Query: 222 EMFEPYGTITSYRVMNN-DGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
E+F +G+ITS +VM + G+S+G GFVAY +PE A +A NGK + K +YV AQ+
Sbjct: 301 EIFADFGSITSCKVMRDAQGQSKGSGFVAYSAPEEANRATIEMNGKMIGSKPIYVAMAQR 360
Query: 281 KAERTQELKRRFEMLK 296
K ER +L+ +F ++
Sbjct: 361 KEERRAKLQAQFAQMR 376
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 119/226 (52%), Gaps = 23/226 (10%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQG-NSKGYGFVHFETEEAANKSIEK 170
++++ +LD ++ +YD F+ G +LS +V +D S GY +V++ + A +++E
Sbjct: 5 SLYVGDLDPNVSENQLYDLFNQIGQVLSIRVCRDLMTRRSLGYAYVNYNNVQDATRALEL 64
Query: 171 VNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTI 230
+N +N K V + F R ++ G N++IKN +++ L + F +G I
Sbjct: 65 LNFTPVNGKAVRI-MFSHRDPSIRKSGT-----ANIFIKNLDRAIDNKALHDTFVSFGNI 118
Query: 231 TSYRV-MNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELK 289
S +V +++G+S+G+GFV +E E A+ A+ NG V K ++VG ++ ER Q K
Sbjct: 119 LSCKVATDSNGQSKGYGFVQFEQEESAQVAIDKVNGMLVAEKQVFVGPFVRRQEREQNGK 178
Query: 290 RRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSA 335
N++VKNL +S D+ L++ F FG ITSA
Sbjct: 179 FN---------------NVFVKNLGESTTDDELKEVFGAFGKITSA 209
>gi|302755232|ref|XP_002961040.1| hypothetical protein SELMODRAFT_74731 [Selaginella moellendorffii]
gi|300171979|gb|EFJ38579.1| hypothetical protein SELMODRAFT_74731 [Selaginella moellendorffii]
Length = 625
Score = 306 bits (783), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 149/262 (56%), Positives = 194/262 (74%), Gaps = 4/262 (1%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D RA++ +N+ + G+ IRIMWS RDPS RKSGVGN+FIKNLD+SIDNKA++DTF AFG
Sbjct: 90 DAVRAMEALNYTPINGKTIRIMWSHRDPSTRKSGVGNIFIKNLDESIDNKALHDTFIAFG 149
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
ILSCK+A + G SKGYGFVHFET+EAAN +IEKVNGM L K VFV KF+ R +R
Sbjct: 150 PILSCKIAHQD-GRSKGYGFVHFETDEAANLAIEKVNGMQLVGKKVFVAKFVKRSDRLAA 208
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDG-KSRGFGFVAYESPE 254
GE FTNV++KN + +E++ E F +G IT+ +M ++ KS+GFGFV ++ PE
Sbjct: 209 TGETK--FTNVFVKNLDPEMAEEEINEHFSTFGVITNVVIMKDENDKSKGFGFVNFDDPE 266
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A AV+ N ++ + +YVGRAQKKAER Q L+R+FE ++E+ +YQG NLYVKNLD
Sbjct: 267 AARAAVETMNNSQLGSRTIYVGRAQKKAEREQILRRQFEEKRMEQFQKYQGANLYVKNLD 326
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
DSIDDE L++EF+ +G ITSAK
Sbjct: 327 DSIDDETLKQEFSRYGNITSAK 348
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 73/184 (39%), Positives = 111/184 (60%), Gaps = 11/184 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NVF+KNLD + + + + FS FG I + + +DE SKG+GFV+F+ EAA ++E +
Sbjct: 216 NVFVKNLDPEMAEEEINEHFSTFGVITNVVIMKDENDKSKGFGFVNFDDPEAARAAVETM 275
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELG-----EKAKLF-----TNVYIKNFGEDFNDEKLK 221
N L S+ ++VG+ + ERE+ L ++ + F N+Y+KN + +DE LK
Sbjct: 276 NNSQLGSRTIYVGRAQKKAEREQILRRQFEEKRMEQFQKYQGANLYVKNLDDSIDDETLK 335
Query: 222 EMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
+ F YG ITS +VM ++ G S+GFGFV + SPE A +A NG ++GK +YV AQ+
Sbjct: 336 QEFSRYGNITSAKVMRDEKGISKGFGFVCFTSPEEASRAATETNGLMINGKPIYVAMAQR 395
Query: 281 KAER 284
K R
Sbjct: 396 KEIR 399
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/121 (36%), Positives = 70/121 (57%), Gaps = 16/121 (13%)
Query: 80 ALDTMNFDALKGRPIRIMWSQ----RDPSLR------------KSGVGNVFIKNLDKSID 123
A++TMN L R I + +Q R+ LR K N+++KNLD SID
Sbjct: 271 AVETMNNSQLGSRTIYVGRAQKKAEREQILRRQFEEKRMEQFQKYQGANLYVKNLDDSID 330
Query: 124 NKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFV 183
++ + FS +G+I S KV +DE+G SKG+GFV F + E A+++ + NG+++N K ++V
Sbjct: 331 DETLKQEFSRYGNITSAKVMRDEKGISKGFGFVCFTSPEEASRAATETNGLMINGKPIYV 390
Query: 184 G 184
Sbjct: 391 A 391
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 66/136 (48%), Gaps = 20/136 (14%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQ 261
++Y+ + E + +L +F G +TS RV + +S G+G+V Y S A +A++
Sbjct: 37 VSLYVGDLDETVAETQLFTIFSQMGLVTSVRVCRDAVTRRSLGYGYVNYSSGADAVRAME 96
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGV-NLYVKNLDDSIDDE 320
A N ++GK + + + + R GV N+++KNLD+SID++
Sbjct: 97 ALNYTPINGKTIRIMWSHRDPS-----------------TRKSGVGNIFIKNLDESIDNK 139
Query: 321 RLRKEFTPFGTITSAK 336
L F FG I S K
Sbjct: 140 ALHDTFIAFGPILSCK 155
>gi|1737492|gb|AAB38974.1| poly(A)-binding protein [Triticum aestivum]
Length = 651
Score = 306 bits (783), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 153/262 (58%), Positives = 191/262 (72%), Gaps = 3/262 (1%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D RAL+ +NF + GRPIRIM+S RDPSLRKSG N+FIKNLDKSIDNKA+YDTF FG
Sbjct: 85 DAARALEMLNFTPINGRPIRIMYSNRDPSLRKSGTANIFIKNLDKSIDNKALYDTFCVFG 144
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCKVA D G SKGYGFV +E +EAA+ +IEK+NGML+N K V+VG F+ ++ER+
Sbjct: 145 NILSCKVATDPAGESKGYGFVQYERDEAAHAAIEKLNGMLMNDKKVYVGPFVRKQERDNS 204
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPE 254
G F NVY+KN E ++ LKE+F +G ITS VM + DG+S+ FGFV +ESP+
Sbjct: 205 PGNVK--FNNVYVKNLAETTTEDDLKEIFGKFGAITSVVVMRDGDGRSKCFGFVNFESPD 262
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A AVQ NGK+ K YVGRAQKK+ER ELK +FE E ++YQ NLY+KNLD
Sbjct: 263 EAALAVQDLNGKKFSDKEWYVGRAQKKSEREIELKEKFEKNLQEAADKYQNTNLYLKNLD 322
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
D++DDE+LR+ F FGTITS K
Sbjct: 323 DTVDDEKLRELFAEFGTITSCK 344
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 79/208 (37%), Positives = 123/208 (59%), Gaps = 11/208 (5%)
Query: 100 QRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFE 159
+RD S NV++KNL ++ + + F FG+I S V +D G SK +GFV+FE
Sbjct: 200 ERDNSPGNVKFNNVYVKNLAETTTEDDLKEIFGKFGAITSVVVMRDGDGRSKCFGFVNFE 259
Query: 160 TEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEK--------AKLF--TNVYIK 209
+ + A +++ +NG + K +VG+ + ERE EL EK A + TN+Y+K
Sbjct: 260 SPDEAALAVQDLNGKKFSDKEWYVGRAQKKSEREIELKEKFEKNLQEAADKYQNTNLYLK 319
Query: 210 NFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPEFAEKAVQAWNGKEV 268
N + +DEKL+E+F +GTITS +VM +++G SRG GFVA++S + A +A+ N K V
Sbjct: 320 NLDDTVDDEKLRELFAEFGTITSCKVMRDSNGASRGSGFVAFKSADDASRALAEMNNKMV 379
Query: 269 DGKILYVGRAQKKAERTQELKRRFEMLK 296
K LYV AQ+K +R L+ +F ++
Sbjct: 380 GNKPLYVALAQRKEDRKARLQAQFSQMR 407
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 118/226 (52%), Gaps = 22/226 (9%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQG-NSKGYGFVHFETEEAANKSIEK 170
++++ +LD S+ + ++D F+ G ++S +V +D S GY +V++ T A +++E
Sbjct: 33 SLYVGDLDVSVQDAQLFDVFAQIGGVVSVRVCRDVTSRKSLGYAYVNYNTPADAARALEM 92
Query: 171 VNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTI 230
+N +N + + I R+ L + N++IKN + +++ L + F +G I
Sbjct: 93 LNFTPINGRPI----RIMYSNRDPSLRKSGT--ANIFIKNLDKSIDNKALYDTFCVFGNI 146
Query: 231 TSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELK 289
S +V + G+S+G+GFV YE E A A++ NG ++ K +YVG +K ER
Sbjct: 147 LSCKVATDPAGESKGYGFVQYERDEAAHAAIEKLNGMLMNDKKVYVGPFVRKQERDNSPG 206
Query: 290 R-RFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITS 334
+F N+YVKNL ++ ++ L++ F FG ITS
Sbjct: 207 NVKFN-------------NVYVKNLAETTTEDDLKEIFGKFGAITS 239
>gi|241948533|ref|XP_002416989.1| ARS consensus binding protein, putative; poly(A)-binding protein,
putative; polyadenylate tail-binding protein, putative;
polyadenylate-binding protein, cytoplasmic and nuclear,
putative [Candida dubliniensis CD36]
gi|223640327|emb|CAX44577.1| ARS consensus binding protein, putative [Candida dubliniensis CD36]
Length = 627
Score = 306 bits (783), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 154/262 (58%), Positives = 204/262 (77%), Gaps = 1/262 (0%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D E+A++ +N+ ++GRP RIMWSQRDPS R+SG GN+FIKNL +IDNKA++DTFSAFG
Sbjct: 104 DGEKAIEELNYTPIEGRPCRIMWSQRDPSARRSGDGNIFIKNLHPAIDNKALHDTFSAFG 163
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
ILSCKVA DE G SK +GFVH+ET EAA +IE VNGMLLN + VFVGK I +K+RE +
Sbjct: 164 KILSCKVAADEFGQSKCFGFVHYETAEAAEAAIENVNGMLLNDREVFVGKHISKKDRESK 223
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITS-YRVMNNDGKSRGFGFVAYESPE 254
E FTN+Y+KN ++++E +++F PYG ITS Y + DGKS+GFGFV +E+ +
Sbjct: 224 FEEMKANFTNIYVKNIDLNYSEESFEKLFAPYGKITSIYLEKDQDGKSKGFGFVNFENHD 283
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A KAV+ N KE++G+ +YVGRAQKK ER +ELK+++E ++E+L +YQGVNL+VKNLD
Sbjct: 284 SAVKAVEELNDKEINGQKIYVGRAQKKRERLEELKKQYEAARLEKLAKYQGVNLFVKNLD 343
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
D+ID E+L +EF FGTITSAK
Sbjct: 344 DAIDSEKLEEEFKSFGTITSAK 365
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 74/205 (36%), Positives = 128/205 (62%), Gaps = 11/205 (5%)
Query: 107 KSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANK 166
K+ N+++KN+D + ++ F+ +G I S + +D+ G SKG+GFV+FE ++A K
Sbjct: 228 KANFTNIYVKNIDLNYSEESFEKLFAPYGKITSIYLEKDQDGKSKGFGFVNFENHDSAVK 287
Query: 167 SIEKVNGMLLNSKIVFVGKFIPRKEREKELG---EKAKL-------FTNVYIKNFGEDFN 216
++E++N +N + ++VG+ ++ER +EL E A+L N+++KN + +
Sbjct: 288 AVEELNDKEINGQKIYVGRAQKKRERLEELKKQYEAARLEKLAKYQGVNLFVKNLDDAID 347
Query: 217 DEKLKEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYV 275
EKL+E F+ +GTITS +VM +D GKS+GFGFV + +PE A KA+ N + ++GK LYV
Sbjct: 348 SEKLEEEFKSFGTITSAKVMVDDAGKSKGFGFVCFTTPEEATKAITEMNTRMINGKPLYV 407
Query: 276 GRAQKKAERTQELKRRFEMLKIERL 300
AQ+K R +L+++ + R+
Sbjct: 408 ALAQRKDVRRSQLEQQIQARNQMRM 432
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 67/148 (45%), Gaps = 21/148 (14%)
Query: 194 KELGEKAKLFTN---VYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFV 248
+E GE + + N +Y+ N+ L E+F P G ++S RV + KS G+ +V
Sbjct: 38 EEQGESSGVAENSASLYVGELNPSVNEATLFEIFSPIGQVSSIRVCRDAVSKKSLGYAYV 97
Query: 249 AYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNL 308
Y E EKA++ N ++G+ + +Q+ R N+
Sbjct: 98 NYHKYEDGEKAIEELNYTPIEGRPCRIMWSQRDPS----------------ARRSGDGNI 141
Query: 309 YVKNLDDSIDDERLRKEFTPFGTITSAK 336
++KNL +ID++ L F+ FG I S K
Sbjct: 142 FIKNLHPAIDNKALHDTFSAFGKILSCK 169
>gi|66800163|ref|XP_629007.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
gi|74996426|sp|Q54BM2.1|PAP1A_DICDI RecName: Full=Polyadenylate-binding protein 1-A; Short=PABP-1-A;
Short=Poly(A)-binding protein, cytoplasmic 1-A
gi|60462370|gb|EAL60591.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
Length = 565
Score = 305 bits (782), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 154/261 (59%), Positives = 194/261 (74%), Gaps = 11/261 (4%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D ERALDT+N ++G+ RIMWSQRDPSLRKSGVGNVFIKNLDK ID+KA+YDTFSAFG
Sbjct: 63 DAERALDTLNNTPIRGKACRIMWSQRDPSLRKSGVGNVFIKNLDKGIDHKALYDTFSAFG 122
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCKV D+ +SKG+GFVH+ET+E+A+K+I KVNGM++N + VFVG F KER +
Sbjct: 123 NILSCKVVTDDGNSSKGFGFVHYETQESADKAIAKVNGMMINGQKVFVGPFKSSKERGQP 182
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPE 254
K FTNV+ KN ED ++LKE+ + YG IT+ +M +D GKS+GFGF +ES E
Sbjct: 183 TEVK---FTNVFFKNLSEDVGPDQLKELLQQYGEITNITIMADDKGKSKGFGFANFESAE 239
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A+ V+ NGK GK +Y GRAQKK ER ELK FE +YQGVNLY+KN+D
Sbjct: 240 AAKNVVENENGKIFHGKPIYAGRAQKKIEREAELKHTFE-------TKYQGVNLYIKNID 292
Query: 315 DSIDDERLRKEFTPFGTITSA 335
DSID+++LR+ F+ FGTITSA
Sbjct: 293 DSIDNDKLREVFSQFGTITSA 313
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 70/187 (37%), Positives = 109/187 (58%), Gaps = 5/187 (2%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NVF KNL + + + + +G I + + D++G SKG+GF +FE+ EAA +E
Sbjct: 189 NVFFKNLSEDVGPDQLKELLQQYGEITNITIMADDKGKSKGFGFANFESAEAAKNVVENE 248
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELG---EKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
NG + + K ++ G+ + ERE EL E N+YIKN + +++KL+E+F +G
Sbjct: 249 NGKIFHGKPIYAGRAQKKIEREAELKHTFETKYQGVNLYIKNIDDSIDNDKLREVFSQFG 308
Query: 229 TITSYRVMNND--GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQ 286
TITS VM +D S+GFGFV Y +P+ A +AV NG+ + K LYV AQ+K R
Sbjct: 309 TITSAIVMKDDKATTSKGFGFVCYTAPDEATRAVTEMNGRMIGTKPLYVALAQRKDIRRA 368
Query: 287 ELKRRFE 293
+L+ + +
Sbjct: 369 QLEMQHQ 375
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 63/136 (46%), Gaps = 20/136 (14%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM--NNDGKSRGFGFVAYESPEFAEKAVQ 261
+++Y+ + + +++ L E+F G +++ RV N +S + +V Y + AE+A+
Sbjct: 10 SSLYVGDLLPEVSEQHLFEIFNQVGLVSNIRVCRDTNTRRSLSYAYVNYYNGADAERALD 69
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGV-NLYVKNLDDSIDDE 320
N + GK + +Q+ R GV N+++KNLD ID +
Sbjct: 70 TLNNTPIRGKACRIMWSQRDPSL-----------------RKSGVGNVFIKNLDKGIDHK 112
Query: 321 RLRKEFTPFGTITSAK 336
L F+ FG I S K
Sbjct: 113 ALYDTFSAFGNILSCK 128
>gi|395818359|ref|XP_003782600.1| PREDICTED: polyadenylate-binding protein 1, partial [Otolemur
garnettii]
Length = 539
Score = 305 bits (781), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 158/275 (57%), Positives = 188/275 (68%), Gaps = 36/275 (13%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD +KG+P+RIMWSQRDPSLRK
Sbjct: 53 GYAYVNFQQP--ADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKX-------------- 96
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
SKGYGFVHFET+EAA ++IEK+NGMLLN + VF
Sbjct: 97 -------------------XXXXXXXXSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVF 137
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GK 241
VG+F RKERE ELG +AK FTNVYIKNFGED +DE+LK++F +G S +VM ++ GK
Sbjct: 138 VGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGK 197
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
S+GFGFV++E E A+ NGKE++GK +YVGRAQKK ER ELKR+FE +K +R+
Sbjct: 198 SKGFGFVSFERHEDAQXXXXXMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRIT 257
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLYVKNLDD IDDERLRKEF+PFGTITSAK
Sbjct: 258 RYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAK 292
Score = 154 bits (388), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 92/232 (39%), Positives = 128/232 (55%), Gaps = 16/232 (6%)
Query: 77 TERALDTMNFDALKGRPIRI----MWSQRDPSL--RKSGVGNVFIKNLDKSIDNKAMYDT 130
ERA++ MN L R + + +R+ L R NV+IKN + +D++ + D
Sbjct: 119 AERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDL 178
Query: 131 FSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRK 190
F FG LS KV DE G SKG+GFV FE E A +NG LN K ++VG+ +
Sbjct: 179 FGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQXXXXXMNGKELNGKQIYVGRAQKKV 238
Query: 191 EREKELGEKAKLF----------TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDG 240
ER+ EL K + N+Y+KN + +DE+L++ F P+GTITS +VM G
Sbjct: 239 ERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGG 298
Query: 241 KSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRF 292
+S+GFGFV + SPE A KAV NG+ V K LYV AQ+K ER L ++
Sbjct: 299 RSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAHLTNQY 350
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 105/236 (44%), Gaps = 49/236 (20%)
Query: 102 DPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFET 160
+PS + ++++ +L + +Y+ FS G ILS +V +D S GY +V+F+
Sbjct: 2 NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 161 EEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKL 220
A ++++ +N ++ K V + +++ D L
Sbjct: 62 PADAERALDTMNFDVIKGKPVRI------------------MWSQ----------RDPSL 93
Query: 221 KEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
++ S+G+GFV +E+ E AE+A++ NG ++ + ++VGR +
Sbjct: 94 RKX----------XXXXXXXXSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKS 143
Query: 281 KAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ ER EL R + N+Y+KN + +DDERL+ F FG S K
Sbjct: 144 RKEREAELGARAKEF----------TNVYIKNFGEDMDDERLKDLFGKFGPALSVK 189
>gi|172092|gb|AAA34838.1| polyadenylate-binding protein [Saccharomyces cerevisiae]
Length = 577
Score = 305 bits (781), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 145/259 (55%), Positives = 193/259 (74%), Gaps = 1/259 (0%)
Query: 79 RALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSIL 138
+A++ +N+ +KGR RIMWSQRDPSLRK G GN+FIKNL IDNKA+YDTFS FG IL
Sbjct: 94 KAIEQLNYTPIKGRLCRIMWSQRDPSLRKKGSGNIFIKNLHPDIDNKALYDTFSVFGDIL 153
Query: 139 SCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGE 198
S K+A DE G SKG+GFVHFE E AA ++I+ +NGMLLN + ++V + RKER+ +L E
Sbjct: 154 SSKIATDENGKSKGFGFVHFEEEGAAKEAIDALNGMLLNGQEIYVAPHLSRKERDSQLEE 213
Query: 199 KAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGKSRGFGFVAYESPEFAE 257
+TN+Y+KN + DE+ +E+F +G I S + + DGK +GFGFV YE E A
Sbjct: 214 TKAHYTNLYVKNINSETTDEQFQELFAKFGPIVSASLEKDADGKLKGFGFVNYEKHEDAV 273
Query: 258 KAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSI 317
KAV+A N E++G+ LYVGRAQKK ER LK+++E ++E++ +YQGVNL+VKNLDDS+
Sbjct: 274 KAVEALNDSELNGEKLYVGRAQKKNERMHVLKKQYEAYRLEKMAKYQGVNLFVKNLDDSV 333
Query: 318 DDERLRKEFTPFGTITSAK 336
DDE+L +EF P+GTITSAK
Sbjct: 334 DDEKLEEEFAPYGTITSAK 352
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 81/231 (35%), Positives = 132/231 (57%), Gaps = 17/231 (7%)
Query: 80 ALDTMNFDALKGRPI----RIMWSQRDPSLR--KSGVGNVFIKNLDKSIDNKAMYDTFSA 133
A+D +N L G+ I + +RD L K+ N+++KN++ ++ + F+
Sbjct: 182 AIDALNGMLLNGQEIYVAPHLSRKERDSQLEETKAHYTNLYVKNINSETTDEQFQELFAK 241
Query: 134 FGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKERE 193
FG I+S + +D G KG+GFV++E E A K++E +N LN + ++VG+ + ER
Sbjct: 242 FGPIVSASLEKDADGKLKGFGFVNYEKHEDAVKAVEALNDSELNGEKLYVGRAQKKNERM 301
Query: 194 KELGEKAKLF----------TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GKS 242
L ++ + + N+++KN + +DEKL+E F PYGTITS +VM + GKS
Sbjct: 302 HVLKKQYEAYRLEKMAKYQGVNLFVKNLDDSVDDEKLEEEFAPYGTITSAKVMRTENGKS 361
Query: 243 RGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFE 293
+GFGFV + +PE A KA+ N + V GK LYV AQ+K R +L ++ +
Sbjct: 362 KGFGFVCFSTPEEATKAITEKNQQIVAGKPLYVAIAQRKDVRRSQLAQQIQ 412
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 121/227 (53%), Gaps = 18/227 (7%)
Query: 111 GNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSIE 169
++++ +L+ S+ +YD FS GS+ S +V +D S GY +V+F EA K+IE
Sbjct: 38 ASLYVGDLEPSVSEAHLYDIFSPIGSVSSIRVCRDAITKTSLGYAYVNFNDHEAGRKAIE 97
Query: 170 KVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGT 229
++N + ++ I +R+ L +K N++IKN D +++ L + F +G
Sbjct: 98 QLNYTPIKGRLC----RIMWSQRDPSLRKKGS--GNIFIKNLHPDIDNKALYDTFSVFGD 151
Query: 230 ITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S ++ ++ GKS+GFGFV +E A++A+ A NG ++G+ +YV + ER +L
Sbjct: 152 ILSSKIATDENGKSKGFGFVHFEEEGAAKEAIDALNGMLLNGQEIYVAPHLSRKERDSQL 211
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSA 335
+ + NLYVKN++ DE+ ++ F FG I SA
Sbjct: 212 EE----------TKAHYTNLYVKNINSETTDEQFQELFAKFGPIVSA 248
>gi|6321013|ref|NP_011092.1| Pab1p [Saccharomyces cerevisiae S288c]
gi|417441|sp|P04147.4|PABP_YEAST RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=ARS consensus-binding protein ACBP-67;
AltName: Full=Polyadenylate tail-binding protein
gi|171967|gb|AAA34787.1| poly (A)-binding protein [Saccharomyces cerevisiae]
gi|218386|dbj|BAA00017.1| polyadenylate-binding protein [Saccharomyces cerevisiae]
gi|603406|gb|AAB64692.1| Pab1p: polyadenylate-binding protein [Saccharomyces cerevisiae]
gi|51013159|gb|AAT92873.1| YER165W [Saccharomyces cerevisiae]
gi|151944882|gb|EDN63141.1| poly(A) binding protein [Saccharomyces cerevisiae YJM789]
gi|207345803|gb|EDZ72507.1| YER165Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|259146093|emb|CAY79353.1| Pab1p [Saccharomyces cerevisiae EC1118]
gi|285811799|tpg|DAA07827.1| TPA: Pab1p [Saccharomyces cerevisiae S288c]
gi|365765943|gb|EHN07446.1| Pab1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|392299869|gb|EIW10961.1| Pab1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 577
Score = 305 bits (781), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 145/259 (55%), Positives = 193/259 (74%), Gaps = 1/259 (0%)
Query: 79 RALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSIL 138
+A++ +N+ +KGR RIMWSQRDPSLRK G GN+FIKNL IDNKA+YDTFS FG IL
Sbjct: 94 KAIEQLNYTPIKGRLCRIMWSQRDPSLRKKGSGNIFIKNLHPDIDNKALYDTFSVFGDIL 153
Query: 139 SCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGE 198
S K+A DE G SKG+GFVHFE E AA ++I+ +NGMLLN + ++V + RKER+ +L E
Sbjct: 154 SSKIATDENGKSKGFGFVHFEEEGAAKEAIDALNGMLLNGQEIYVAPHLSRKERDSQLEE 213
Query: 199 KAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGKSRGFGFVAYESPEFAE 257
+TN+Y+KN + DE+ +E+F +G I S + + DGK +GFGFV YE E A
Sbjct: 214 TKAHYTNLYVKNINSETTDEQFQELFAKFGPIVSASLEKDADGKLKGFGFVNYEKHEDAV 273
Query: 258 KAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSI 317
KAV+A N E++G+ LYVGRAQKK ER LK+++E ++E++ +YQGVNL+VKNLDDS+
Sbjct: 274 KAVEALNDSELNGEKLYVGRAQKKNERMHVLKKQYEAYRLEKMAKYQGVNLFVKNLDDSV 333
Query: 318 DDERLRKEFTPFGTITSAK 336
DDE+L +EF P+GTITSAK
Sbjct: 334 DDEKLEEEFAPYGTITSAK 352
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 81/231 (35%), Positives = 132/231 (57%), Gaps = 17/231 (7%)
Query: 80 ALDTMNFDALKGRPI----RIMWSQRDPSLR--KSGVGNVFIKNLDKSIDNKAMYDTFSA 133
A+D +N L G+ I + +RD L K+ N+++KN++ ++ + F+
Sbjct: 182 AIDALNGMLLNGQEIYVAPHLSRKERDSQLEETKAHYTNLYVKNINSETTDEQFQELFAK 241
Query: 134 FGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKERE 193
FG I+S + +D G KG+GFV++E E A K++E +N LN + ++VG+ + ER
Sbjct: 242 FGPIVSASLEKDADGKLKGFGFVNYEKHEDAVKAVEALNDSELNGEKLYVGRAQKKNERM 301
Query: 194 KELGEKAKLF----------TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GKS 242
L ++ + + N+++KN + +DEKL+E F PYGTITS +VM + GKS
Sbjct: 302 HVLKKQYEAYRLEKMAKYQGVNLFVKNLDDSVDDEKLEEEFAPYGTITSAKVMRTENGKS 361
Query: 243 RGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFE 293
+GFGFV + +PE A KA+ N + V GK LYV AQ+K R +L ++ +
Sbjct: 362 KGFGFVCFSTPEEATKAITEKNQQIVAGKPLYVAIAQRKDVRRSQLAQQIQ 412
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 121/227 (53%), Gaps = 18/227 (7%)
Query: 111 GNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSIE 169
++++ +L+ S+ +YD FS GS+ S +V +D S GY +V+F EA K+IE
Sbjct: 38 ASLYVGDLEPSVSEAHLYDIFSPIGSVSSIRVCRDAITKTSLGYAYVNFNDHEAGRKAIE 97
Query: 170 KVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGT 229
++N + ++ I +R+ L +K N++IKN D +++ L + F +G
Sbjct: 98 QLNYTPIKGRLC----RIMWSQRDPSLRKKGS--GNIFIKNLHPDIDNKALYDTFSVFGD 151
Query: 230 ITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S ++ ++ GKS+GFGFV +E A++A+ A NG ++G+ +YV + ER +L
Sbjct: 152 ILSSKIATDENGKSKGFGFVHFEEEGAAKEAIDALNGMLLNGQEIYVAPHLSRKERDSQL 211
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSA 335
+ + NLYVKN++ DE+ ++ F FG I SA
Sbjct: 212 EE----------TKAHYTNLYVKNINSETTDEQFQELFAKFGPIVSA 248
>gi|358058232|dbj|GAA95909.1| hypothetical protein E5Q_02567 [Mixia osmundae IAM 14324]
Length = 614
Score = 305 bits (781), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 143/262 (54%), Positives = 195/262 (74%), Gaps = 1/262 (0%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D ERAL+ +N+ +KG+P RIMWSQRDP+LRK+ +GN+FIKNLD+SIDNKA++DTF+AFG
Sbjct: 32 DGERALEQLNYTPIKGKPCRIMWSQRDPALRKTSLGNIFIKNLDESIDNKALHDTFAAFG 91
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCKVA DE G SKGYGFVH+E EAA +I+ VNGMLLN K+V+VG +PR+ER+ +
Sbjct: 92 NILSCKVALDENGLSKGYGFVHYEGGEAAEAAIQAVNGMLLNDKVVYVGHHVPRRERQAK 151
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRV-MNNDGKSRGFGFVAYESPE 254
+ E +TN+Y+K + ++ + E+F YG +TS + ++ DGKS+GFGFV + E
Sbjct: 152 IDEVRSNYTNLYVKGLAPEISEAEFSELFAKYGQVTSAVLQVDQDGKSKGFGFVNFADHE 211
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A KA+ + E G+ LYV RAQKK ER +ELK+ +E K ++ +YQGVNLYVKNL+
Sbjct: 212 AAAKALTELHDSEHKGQTLYVSRAQKKGEREEELKKSYEQQKYDKSLKYQGVNLYVKNLE 271
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
D +D+E++ EF FGTITS K
Sbjct: 272 DDMDEEKVTAEFAAFGTITSTK 293
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/197 (35%), Positives = 111/197 (56%), Gaps = 11/197 (5%)
Query: 107 KSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANK 166
+S N+++K L I + F+ +G + S + D+ G SKG+GFV+F EAA K
Sbjct: 156 RSNYTNLYVKGLAPEISEAEFSELFAKYGQVTSAVLQVDQDGKSKGFGFVNFADHEAAAK 215
Query: 167 SIEKVNGMLLNSKIVFVGKFIPRKEREKELG---EKAKL-------FTNVYIKNFGEDFN 216
++ +++ + ++V + + ERE+EL E+ K N+Y+KN +D +
Sbjct: 216 ALTELHDSEHKGQTLYVSRAQKKGEREEELKKSYEQQKYDKSLKYQGVNLYVKNLEDDMD 275
Query: 217 DEKLKEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYV 275
+EK+ F +GTITS ++M ++ G S+GFGFV + SP+ A KAV NGK K LYV
Sbjct: 276 EEKVTAEFAAFGTITSTKIMRDEKGASKGFGFVCFSSPDEATKAVTELNGKMFGQKPLYV 335
Query: 276 GRAQKKAERTQELKRRF 292
AQ+K R Q+L+ +
Sbjct: 336 SLAQRKDVRKQQLEAQL 352
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 103/204 (50%), Gaps = 18/204 (8%)
Query: 134 FGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKER 192
GS+ S +V +D S GY +V+F +++E++N + K I +R
Sbjct: 2 IGSVASIRVCRDAVTRRSLGYAYVNFMNAADGERALEQLNYTPIKGKPC----RIMWSQR 57
Query: 193 EKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRV-MNNDGKSRGFGFVAYE 251
+ L + N++IKN E +++ L + F +G I S +V ++ +G S+G+GFV YE
Sbjct: 58 DPAL--RKTSLGNIFIKNLDESIDNKALHDTFAAFGNILSCKVALDENGLSKGYGFVHYE 115
Query: 252 SPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVK 311
E AE A+QA NG ++ K++YVG + RR KI+ + R NLYVK
Sbjct: 116 GGEAAEAAIQAVNGMLLNDKVVYVG---------HHVPRRERQAKIDEV-RSNYTNLYVK 165
Query: 312 NLDDSIDDERLRKEFTPFGTITSA 335
L I + + F +G +TSA
Sbjct: 166 GLAPEISEAEFSELFAKYGQVTSA 189
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 68/105 (64%), Gaps = 5/105 (4%)
Query: 102 DPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETE 161
D SL+ GV N+++KNL+ +D + + F+AFG+I S K+ +DE+G SKG+GFV F +
Sbjct: 255 DKSLKYQGV-NLYVKNLEDDMDEEKVTAEFAAFGTITSTKIMRDEKGASKGFGFVCFSSP 313
Query: 162 EAANKSIEKVNGMLLNSKIVFVG----KFIPRKEREKELGEKAKL 202
+ A K++ ++NG + K ++V K + +++ E +L ++ ++
Sbjct: 314 DEATKAVTELNGKMFGQKPLYVSLAQRKDVRKQQLEAQLAQRNQI 358
>gi|256271306|gb|EEU06376.1| Pab1p [Saccharomyces cerevisiae JAY291]
Length = 577
Score = 305 bits (781), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 145/259 (55%), Positives = 193/259 (74%), Gaps = 1/259 (0%)
Query: 79 RALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSIL 138
+A++ +N+ +KGR RIMWSQRDPSLRK G GN+FIKNL IDNKA+YDTFS FG IL
Sbjct: 94 KAIEQLNYTPIKGRLCRIMWSQRDPSLRKKGSGNIFIKNLHPDIDNKALYDTFSVFGDIL 153
Query: 139 SCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGE 198
S K+A DE G SKG+GFVHFE E AA ++I+ +NGMLLN + ++V + RKER+ +L E
Sbjct: 154 SSKIATDENGKSKGFGFVHFEEEGAAKEAIDALNGMLLNGQEIYVAPHLSRKERDSQLEE 213
Query: 199 KAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGKSRGFGFVAYESPEFAE 257
+TN+Y+KN + DE+ +E+F +G I S + + DGK +GFGFV YE E A
Sbjct: 214 TKAHYTNLYVKNINSETTDEQFQELFAKFGPIVSASLEKDADGKLKGFGFVNYEKHEDAV 273
Query: 258 KAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSI 317
KAV+A N E++G+ LYVGRAQKK ER LK+++E ++E++ +YQGVNL+VKNLDDS+
Sbjct: 274 KAVEALNDSELNGEKLYVGRAQKKNERMHVLKKQYEAYRLEKMAKYQGVNLFVKNLDDSV 333
Query: 318 DDERLRKEFTPFGTITSAK 336
DDE+L +EF P+GTITSAK
Sbjct: 334 DDEKLEEEFAPYGTITSAK 352
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 81/231 (35%), Positives = 132/231 (57%), Gaps = 17/231 (7%)
Query: 80 ALDTMNFDALKGRPI----RIMWSQRDPSLR--KSGVGNVFIKNLDKSIDNKAMYDTFSA 133
A+D +N L G+ I + +RD L K+ N+++KN++ ++ + F+
Sbjct: 182 AIDALNGMLLNGQEIYVAPHLSRKERDSQLEETKAHYTNLYVKNINSETTDEQFQELFAK 241
Query: 134 FGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKERE 193
FG I+S + +D G KG+GFV++E E A K++E +N LN + ++VG+ + ER
Sbjct: 242 FGPIVSASLEKDADGKLKGFGFVNYEKHEDAVKAVEALNDSELNGEKLYVGRAQKKNERM 301
Query: 194 KELGEKAKLF----------TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GKS 242
L ++ + + N+++KN + +DEKL+E F PYGTITS +VM + GKS
Sbjct: 302 HVLKKQYEAYRLEKMAKYQGVNLFVKNLDDSVDDEKLEEEFAPYGTITSAKVMRTENGKS 361
Query: 243 RGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFE 293
+GFGFV + +PE A KA+ N + V GK LYV AQ+K R +L ++ +
Sbjct: 362 KGFGFVCFSTPEEATKAITEKNQQIVAGKPLYVAIAQRKDVRRSQLAQQIQ 412
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 121/227 (53%), Gaps = 18/227 (7%)
Query: 111 GNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSIE 169
++++ +L+ S+ +YD FS GS+ S +V +D S GY +V+F EA K+IE
Sbjct: 38 ASLYVGDLEPSVSEAHLYDIFSPIGSVSSIRVCRDAITKTSLGYAYVNFNDHEAGRKAIE 97
Query: 170 KVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGT 229
++N + ++ I +R+ L +K N++IKN D +++ L + F +G
Sbjct: 98 QLNYTPIKGRLC----RIMWSQRDPSLRKKGS--GNIFIKNLHPDIDNKALYDTFSVFGD 151
Query: 230 ITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S ++ ++ GKS+GFGFV +E A++A+ A NG ++G+ +YV + ER +L
Sbjct: 152 ILSSKIATDENGKSKGFGFVHFEEEGAAKEAIDALNGMLLNGQEIYVAPHLSRKERDSQL 211
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSA 335
+ + NLYVKN++ DE+ ++ F FG I SA
Sbjct: 212 EE----------TKAHYTNLYVKNINSETTDEQFQELFAKFGPIVSA 248
>gi|294659673|ref|XP_002770625.1| DEHA2G12474p [Debaryomyces hansenii CBS767]
gi|218511736|sp|Q6BI95.2|PABP_DEBHA RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|199434145|emb|CAR65959.1| DEHA2G12474p [Debaryomyces hansenii CBS767]
Length = 627
Score = 305 bits (781), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 153/262 (58%), Positives = 207/262 (79%), Gaps = 1/262 (0%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D E+A++ +N+ ++GRP RIMWSQRDPSLR++G GN+FIKNL +IDNKA++DTF+AFG
Sbjct: 104 DGEKAIEDLNYSLIEGRPCRIMWSQRDPSLRRNGDGNIFIKNLHPAIDNKALHDTFTAFG 163
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
ILSCKVA D+ G SK +GFVH+ET EAA +IE VNGMLLN + V+VGK I +K+RE +
Sbjct: 164 KILSCKVATDDMGISKCFGFVHYETAEAAEAAIENVNGMLLNDREVYVGKHISKKDRESK 223
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITS-YRVMNNDGKSRGFGFVAYESPE 254
E FTNVY KN DF++E+ K++FE YG ITS Y +++GKS+GFGFV +E+ E
Sbjct: 224 FEEMKANFTNVYAKNIDLDFSEEEFKKLFEAYGKITSIYLEKDHEGKSKGFGFVNFENHE 283
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A KAV N KE++G+ +YVGRAQKK ER +ELK+++E ++E+L++YQGVNL++KNLD
Sbjct: 284 SAVKAVDELNDKEINGQKIYVGRAQKKRERLEELKKQYENTRLEKLSKYQGVNLFIKNLD 343
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
D+ID E+L +EF PFG+ITSA+
Sbjct: 344 DTIDSEKLEEEFKPFGSITSAR 365
Score = 134 bits (336), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 76/198 (38%), Positives = 121/198 (61%), Gaps = 11/198 (5%)
Query: 107 KSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANK 166
K+ NV+ KN+D + F A+G I S + +D +G SKG+GFV+FE E+A K
Sbjct: 228 KANFTNVYAKNIDLDFSEEEFKKLFEAYGKITSIYLEKDHEGKSKGFGFVNFENHESAVK 287
Query: 167 SIEKVNGMLLNSKIVFVGKFIPRKEREKELG--------EKAKLF--TNVYIKNFGEDFN 216
+++++N +N + ++VG+ ++ER +EL EK + N++IKN + +
Sbjct: 288 AVDELNDKEINGQKIYVGRAQKKRERLEELKKQYENTRLEKLSKYQGVNLFIKNLDDTID 347
Query: 217 DEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYV 275
EKL+E F+P+G+ITS RVM + GKS+GFGFV + SPE A KA+ N + + GK LYV
Sbjct: 348 SEKLEEEFKPFGSITSARVMVDETGKSKGFGFVCFSSPEEATKAITEMNQRMIYGKPLYV 407
Query: 276 GRAQKKAERTQELKRRFE 293
AQ+K R +L+++ +
Sbjct: 408 ALAQRKDVRRSQLEQQIQ 425
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 115/226 (50%), Gaps = 18/226 (7%)
Query: 111 GNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSIE 169
++++ L+ S++ +++ FS G + S +V +D S GY +V+F E K+IE
Sbjct: 51 ASLYVGELNPSVNEALLFEIFSPIGQVASIRVCRDAVTKKSLGYAYVNFHKFEDGEKAIE 110
Query: 170 KVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGT 229
+N L+ + I +R+ L N++IKN +++ L + F +G
Sbjct: 111 DLNYSLIEGRPC----RIMWSQRDPSLRRNGD--GNIFIKNLHPAIDNKALHDTFTAFGK 164
Query: 230 ITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S +V +D G S+ FGFV YE+ E AE A++ NG ++ + +YVG+ K +R
Sbjct: 165 ILSCKVATDDMGISKCFGFVHYETAEAAEAAIENVNGMLLNDREVYVGKHISKKDR---- 220
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITS 334
+ +FE +K N+Y KN+D +E +K F +G ITS
Sbjct: 221 ESKFEEMKANF------TNVYAKNIDLDFSEEEFKKLFEAYGKITS 260
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 61/135 (45%), Gaps = 18/135 (13%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQ 261
++Y+ N+ L E+F P G + S RV + KS G+ +V + E EKA++
Sbjct: 51 ASLYVGELNPSVNEALLFEIFSPIGQVASIRVCRDAVTKKSLGYAYVNFHKFEDGEKAIE 110
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDER 321
N ++G+ + +Q+ L R N+++KNL +ID++
Sbjct: 111 DLNYSLIEGRPCRIMWSQRDPS----------------LRRNGDGNIFIKNLHPAIDNKA 154
Query: 322 LRKEFTPFGTITSAK 336
L FT FG I S K
Sbjct: 155 LHDTFTAFGKILSCK 169
>gi|349577826|dbj|GAA22994.1| K7_Pab1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 577
Score = 305 bits (780), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 145/259 (55%), Positives = 193/259 (74%), Gaps = 1/259 (0%)
Query: 79 RALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSIL 138
+A++ +N+ +KGR RIMWSQRDPSLRK G GN+FIKNL IDNKA+YDTFS FG IL
Sbjct: 94 KAIEQLNYTPIKGRLCRIMWSQRDPSLRKKGSGNIFIKNLHPDIDNKALYDTFSVFGDIL 153
Query: 139 SCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGE 198
S K+A DE G SKG+GFVHFE E AA ++I+ +NGMLLN + ++V + RKER+ +L E
Sbjct: 154 SSKIATDENGKSKGFGFVHFEEEGAAKEAIDALNGMLLNGQEIYVAPHLSRKERDSQLEE 213
Query: 199 KAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGKSRGFGFVAYESPEFAE 257
+TN+Y+KN + DE+ +E+F +G I S + + DGK +GFGFV YE E A
Sbjct: 214 TKAHYTNLYVKNINSETTDEQFQELFAKFGPIVSASLEKDADGKLKGFGFVNYEKHEDAV 273
Query: 258 KAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSI 317
KAV+A N E++G+ LYVGRAQKK ER LK+++E ++E++ +YQGVNL+VKNLDDS+
Sbjct: 274 KAVEALNDSELNGEKLYVGRAQKKNERMHVLKKQYEAYRLEKMAKYQGVNLFVKNLDDSV 333
Query: 318 DDERLRKEFTPFGTITSAK 336
DDE+L +EF P+GTITSAK
Sbjct: 334 DDEKLEEEFAPYGTITSAK 352
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 81/231 (35%), Positives = 132/231 (57%), Gaps = 17/231 (7%)
Query: 80 ALDTMNFDALKGRPI----RIMWSQRDPSLR--KSGVGNVFIKNLDKSIDNKAMYDTFSA 133
A+D +N L G+ I + +RD L K+ N+++KN++ ++ + F+
Sbjct: 182 AIDALNGMLLNGQEIYVAPHLSRKERDSQLEETKAHYTNLYVKNINSETTDEQFQELFAK 241
Query: 134 FGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKERE 193
FG I+S + +D G KG+GFV++E E A K++E +N LN + ++VG+ + ER
Sbjct: 242 FGPIVSASLEKDADGKLKGFGFVNYEKHEDAVKAVEALNDSELNGEKLYVGRAQKKNERM 301
Query: 194 KELGEKAKLF----------TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKS 242
L ++ + + N+++KN + +DEKL+E F PYGTITS +VM +GKS
Sbjct: 302 HVLKKQYEAYRLEKMAKYQGVNLFVKNLDDSVDDEKLEEEFAPYGTITSAKVMRTENGKS 361
Query: 243 RGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFE 293
+GFGFV + +PE A KA+ N + V GK LYV AQ+K R +L ++ +
Sbjct: 362 KGFGFVCFSTPEEATKAITEKNQQIVAGKPLYVAIAQRKDVRRSQLAQQIQ 412
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 121/227 (53%), Gaps = 18/227 (7%)
Query: 111 GNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSIE 169
++++ +L+ S+ +YD FS GS+ S +V +D S GY +V+F EA K+IE
Sbjct: 38 ASLYVGDLEPSVSEAHLYDIFSPIGSVSSIRVCRDAITKTSLGYAYVNFNDHEAGRKAIE 97
Query: 170 KVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGT 229
++N + ++ I +R+ L +K N++IKN D +++ L + F +G
Sbjct: 98 QLNYTPIKGRLC----RIMWSQRDPSLRKKGS--GNIFIKNLHPDIDNKALYDTFSVFGD 151
Query: 230 ITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S ++ ++ GKS+GFGFV +E A++A+ A NG ++G+ +YV + ER +L
Sbjct: 152 ILSSKIATDENGKSKGFGFVHFEEEGAAKEAIDALNGMLLNGQEIYVAPHLSRKERDSQL 211
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSA 335
+ + NLYVKN++ DE+ ++ F FG I SA
Sbjct: 212 EE----------TKAHYTNLYVKNINSETTDEQFQELFAKFGPIVSA 248
>gi|452820609|gb|EME27649.1| poly(A) binding / translation initiation factor [Galdieria
sulphuraria]
Length = 784
Score = 305 bits (780), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 154/268 (57%), Positives = 195/268 (72%), Gaps = 7/268 (2%)
Query: 74 MLDTERALDTMNFDAL---KGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDT 130
M D ERAL+TMNF A + +P+R+MW RDP++RKSG GNVFIKNLDK+IDNK ++DT
Sbjct: 128 MDDAERALETMNFYACPQTRDKPMRLMWKNRDPTIRKSGAGNVFIKNLDKAIDNKTLFDT 187
Query: 131 FSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRK 190
FS FG+ILSCKVA D++GNS GYGFVHFE E A +I KVNGMLLN K V+VG F R+
Sbjct: 188 FSVFGNILSCKVATDDEGNSLGYGFVHFENPEDAETAINKVNGMLLNDKQVYVGYFKSRQ 247
Query: 191 EREKELGEKAKLFTNVYIKNFGEDF-NDEKLKEMFEPYGTITS-YRVMNNDGKSRGFGFV 248
ERE E+ +FTNVY KN +EK++E+F YG ITS Y ++ + +GF FV
Sbjct: 248 EREA--SEETHIFTNVYTKNLIPSMCTEEKIRELFSLYGEITSVYVPVDENEVPKGFAFV 305
Query: 249 AYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNL 308
+ PE A KAV+ NG++ +GK LYVGRAQKKAER EL+R+ E + E L +YQGVNL
Sbjct: 306 NFAKPECAAKAVEELNGRDFEGKSLYVGRAQKKAEREAELRRKAENKRAEILKKYQGVNL 365
Query: 309 YVKNLDDSIDDERLRKEFTPFGTITSAK 336
YV+NL D +D+E LRKEF+ FGT+TS +
Sbjct: 366 YVRNLPDDMDEEGLRKEFSNFGTLTSCR 393
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 83/230 (36%), Positives = 126/230 (54%), Gaps = 16/230 (6%)
Query: 76 DTERALDTMNFDALKGRPIRIMW----SQRDPSLRKSGVGNVFIKNLDKSI-DNKAMYDT 130
D E A++ +N L + + + + +R+ S NV+ KNL S+ + + +
Sbjct: 220 DAETAINKVNGMLLNDKQVYVGYFKSRQEREASEETHIFTNVYTKNLIPSMCTEEKIREL 279
Query: 131 FSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRK 190
FS +G I S V DE KG+ FV+F E A K++E++NG K ++VG+ +
Sbjct: 280 FSLYGEITSVYVPVDENEVPKGFAFVNFAKPECAAKAVEELNGRDFEGKSLYVGRAQKKA 339
Query: 191 EREKELGEKAK----------LFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND- 239
ERE EL KA+ N+Y++N +D ++E L++ F +GT+TS RVM +D
Sbjct: 340 EREAELRRKAENKRAEILKKYQGVNLYVRNLPDDMDEEGLRKEFSNFGTLTSCRVMRDDK 399
Query: 240 GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELK 289
G SRGFGFV + +PE A KAV NGK + K LYV AQ+K R +L+
Sbjct: 400 GVSRGFGFVCFSTPEEATKAVTEMNGKMMGKKPLYVCLAQRKEIRQAQLE 449
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 116/225 (51%), Gaps = 18/225 (8%)
Query: 113 VFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQD-EQGNSKGYGFVHFETEEAANKSIEKV 171
+++ +L ++ +++ FSA G + S +V +D S GY +V+F + + A +++E +
Sbjct: 79 IYVGDLHPEVNEANLFEVFSAIGPVASVRVCRDIVTRRSLGYAYVNFHSMDDAERALETM 138
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTIT 231
N + + K R+ + + NV+IKN + +++ L + F +G I
Sbjct: 139 NFYACPQTRDKPMRLM-WKNRDPTIRKSGA--GNVFIKNLDKAIDNKTLFDTFSVFGNIL 195
Query: 232 SYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKR 290
S +V +D G S G+GFV +E+PE AE A+ NG ++ K +YVG + + ER E
Sbjct: 196 SCKVATDDEGNSLGYGFVHFENPEDAETAINKVNGMLLNDKQVYVGYFKSRQER--EASE 253
Query: 291 RFEMLKIERLNRYQGVNLYVKNLDDSI-DDERLRKEFTPFGTITS 334
+ N+Y KNL S+ +E++R+ F+ +G ITS
Sbjct: 254 ETHIF----------TNVYTKNLIPSMCTEEKIRELFSLYGEITS 288
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 63/134 (47%), Gaps = 17/134 (12%)
Query: 206 VYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQAW 263
+Y+ + + N+ L E+F G + S RV + +S G+ +V + S + AE+A++
Sbjct: 79 IYVGDLHPEVNEANLFEVFSAIGPVASVRVCRDIVTRRSLGYAYVNFHSMDDAERALETM 138
Query: 264 NGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGV-NLYVKNLDDSIDDERL 322
N Y +T++ R + R G N+++KNLD +ID++ L
Sbjct: 139 N--------FYA------CPQTRDKPMRLMWKNRDPTIRKSGAGNVFIKNLDKAIDNKTL 184
Query: 323 RKEFTPFGTITSAK 336
F+ FG I S K
Sbjct: 185 FDTFSVFGNILSCK 198
>gi|290981403|ref|XP_002673420.1| polyadenylate binding protein [Naegleria gruberi]
gi|284087003|gb|EFC40676.1| polyadenylate binding protein [Naegleria gruberi]
Length = 571
Score = 305 bits (780), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 157/270 (58%), Positives = 199/270 (73%), Gaps = 10/270 (3%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D ERALDT+N+ ++KG PIRIMWSQRDPS+RKSG+GN+FIKNLDKSIDNKA+YDTFSAFG
Sbjct: 59 DAERALDTLNYASVKGIPIRIMWSQRDPSIRKSGIGNIFIKNLDKSIDNKALYDTFSAFG 118
Query: 136 SILSCKVAQ-----DEQGN---SKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFI 187
+ILSCKV Q D G+ S GYGFVHFET+EAA K+I K+NGMLLN K VFVG F+
Sbjct: 119 NILSCKVCQATKKGDNGGDNVESAGYGFVHFETQEAAEKAIAKINGMLLNGKQVFVGPFV 178
Query: 188 PRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKSRGFG 246
+ ER K L + FTN+Y+KN ++++L E+F +G I + VM +G S+ FG
Sbjct: 179 KKTERLKILSNEDS-FTNIYVKNLDASVDEKELSEVFSKFGEIQNAVVMRGENGASKEFG 237
Query: 247 FVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGV 306
F+ + A A+ N K+ K L+VGRAQKK ER +LK F+ LK E++N+Y+G+
Sbjct: 238 FINFADHASALIAIDEMNEKDFKNKKLFVGRAQKKNERRAKLKEYFQKLKQEKVNKYKGL 297
Query: 307 NLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
NLYVKNLDDS+DDERLR+EF+ FG ITSAK
Sbjct: 298 NLYVKNLDDSVDDERLRQEFSKFGDITSAK 327
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 69/195 (35%), Positives = 114/195 (58%), Gaps = 10/195 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
N+++KNLD S+D K + + FS FG I + V + E G SK +GF++F +A +I+++
Sbjct: 195 NIYVKNLDASVDEKELSEVFSKFGEIQNAVVMRGENGASKEFGFINFADHASALIAIDEM 254
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLFT----------NVYIKNFGEDFNDEKLK 221
N +K +FVG+ + ER +L E + N+Y+KN + +DE+L+
Sbjct: 255 NEKDFKNKKLFVGRAQKKNERRAKLKEYFQKLKQEKVNKYKGLNLYVKNLDDSVDDERLR 314
Query: 222 EMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKK 281
+ F +G ITS +VM+++ +SRGFGFV +++PE A KA+ +G + K LYV AQ K
Sbjct: 315 QEFSKFGDITSAKVMSDNKQSRGFGFVCFKTPEAANKALTEMSGHMIGSKPLYVNFAQPK 374
Query: 282 AERTQELKRRFEMLK 296
R +L+ ++ K
Sbjct: 375 ELRRSQLEAQYNARK 389
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 123/239 (51%), Gaps = 35/239 (14%)
Query: 111 GNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQG-NSKGYGFVHFETEEAANKSIE 169
++++ +L + I ++D F G I+S ++ +D S GY +V+F+ + A ++++
Sbjct: 6 ASLYVGDLHEEISEALLFDLFHEVGPIISIRICRDAMTRKSLGYAYVNFQNPQDAERALD 65
Query: 170 KVNGMLLNSKIVFVGKFIPRK----EREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFE 225
+N + K IP + +R+ + + N++IKN + +++ L + F
Sbjct: 66 TLNYASV--------KGIPIRIMWSQRDPSIRKSG--IGNIFIKNLDKSIDNKALYDTFS 115
Query: 226 PYGTITSYRVM------NNDG---KSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVG 276
+G I S +V +N G +S G+GFV +E+ E AEKA+ NG ++GK ++VG
Sbjct: 116 AFGNILSCKVCQATKKGDNGGDNVESAGYGFVHFETQEAAEKAIAKINGMLLNGKQVFVG 175
Query: 277 RAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSA 335
KK ER + L N N+YVKNLD S+D++ L + F+ FG I +A
Sbjct: 176 PFVKKTERLKILS-----------NEDSFTNIYVKNLDASVDEKELSEVFSKFGEIQNA 223
>gi|317106694|dbj|BAJ53195.1| JHL03K20.4 [Jatropha curcas]
Length = 642
Score = 305 bits (780), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 152/262 (58%), Positives = 201/262 (76%), Gaps = 3/262 (1%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D +A++ +NF + G+PIRIM+S RDP++RKSG GN++IKNLDK+IDNKA++DTFSAFG
Sbjct: 82 DAAQAIEVLNFTPVNGKPIRIMYSYRDPTIRKSGTGNIYIKNLDKAIDNKALHDTFSAFG 141
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
SILSCKVA D G S GYGFV F+ EE+A +I+K+NGMLLN K V+VG F+ ++ERE
Sbjct: 142 SILSCKVATDSLGQSLGYGFVQFDNEESAKNAIDKLNGMLLNDKQVYVGPFLRKQERESA 201
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPE 254
+ +KA F NVY+KN E +E LK++F YGTITS VM + +GKSR FGFV +E+P+
Sbjct: 202 I-DKAT-FNNVYVKNLSETTTEEDLKKIFGEYGTITSAVVMRDGNGKSRCFGFVNFENPD 259
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A ++V+A NGK D K YVG+AQKK+ER ELK RFE E ++++QG+NLYVKNLD
Sbjct: 260 DAAQSVEALNGKTFDEKEWYVGKAQKKSEREVELKGRFEQTLKETVDKFQGLNLYVKNLD 319
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
DSI D++L++ F+ FGTITS K
Sbjct: 320 DSITDDKLKELFSEFGTITSCK 341
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 78/208 (37%), Positives = 121/208 (58%), Gaps = 11/208 (5%)
Query: 100 QRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFE 159
+R+ ++ K+ NV++KNL ++ + + F +G+I S V +D G S+ +GFV+FE
Sbjct: 197 ERESAIDKATFNNVYVKNLSETTTEEDLKKIFGEYGTITSAVVMRDGNGKSRCFGFVNFE 256
Query: 160 TEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELG--------EKAKLFT--NVYIK 209
+ A +S+E +NG + K +VGK + ERE EL E F N+Y+K
Sbjct: 257 NPDDAAQSVEALNGKTFDEKEWYVGKAQKKSEREVELKGRFEQTLKETVDKFQGLNLYVK 316
Query: 210 NFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGKSRGFGFVAYESPEFAEKAVQAWNGKEV 268
N + D+KLKE+F +GTITS +VM + +G SRG GFVA+ + E A +A+ NGK V
Sbjct: 317 NLDDSITDDKLKELFSEFGTITSCKVMRDPNGVSRGSGFVAFSTAEEASRALTEMNGKMV 376
Query: 269 DGKILYVGRAQKKAERTQELKRRFEMLK 296
K LYV AQ+K ER L+ ++ ++
Sbjct: 377 VSKPLYVALAQRKEERRARLQAQYSQIR 404
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 123/227 (54%), Gaps = 22/227 (9%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQD-EQGNSKGYGFVHFETEEAANKSIEK 170
++++ +L++++ +YD F+ G ++S +V +D S GYG+V++ A ++IE
Sbjct: 30 SLYVGDLEQNVTETQLYDLFNQHGQVVSIRVCRDLTSRRSLGYGYVNYNNVHDAAQAIEV 89
Query: 171 VNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTI 230
+N +N K + + + R ++ G N+YIKN + +++ L + F +G+I
Sbjct: 90 LNFTPVNGKPIRI-MYSYRDPTIRKSGTG-----NIYIKNLDKAIDNKALHDTFSAFGSI 143
Query: 231 TSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL- 288
S +V + G+S G+GFV +++ E A+ A+ NG ++ K +YVG +K ER +
Sbjct: 144 LSCKVATDSLGQSLGYGFVQFDNEESAKNAIDKLNGMLLNDKQVYVGPFLRKQERESAID 203
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSA 335
K F N+YVKNL ++ +E L+K F +GTITSA
Sbjct: 204 KATFN-------------NVYVKNLSETTTEEDLKKIFGEYGTITSA 237
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 69/139 (49%), Gaps = 26/139 (18%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQ 261
T++Y+ + ++ + +L ++F +G + S RV + +S G+G+V Y + A +A++
Sbjct: 29 TSLYVGDLEQNVTETQLYDLFNQHGQVVSIRVCRDLTSRRSLGYGYVNYNNVHDAAQAIE 88
Query: 262 AWNGKEVDGK---ILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGV-NLYVKNLDDSI 317
N V+GK I+Y R + R G N+Y+KNLD +I
Sbjct: 89 VLNFTPVNGKPIRIMYSYR--------------------DPTIRKSGTGNIYIKNLDKAI 128
Query: 318 DDERLRKEFTPFGTITSAK 336
D++ L F+ FG+I S K
Sbjct: 129 DNKALHDTFSAFGSILSCK 147
>gi|255538240|ref|XP_002510185.1| polyadenylate-binding protein, putative [Ricinus communis]
gi|223550886|gb|EEF52372.1| polyadenylate-binding protein, putative [Ricinus communis]
Length = 658
Score = 305 bits (780), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 150/262 (57%), Positives = 194/262 (74%), Gaps = 4/262 (1%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D RALD +NF +PIRIM+S RDPS+RKSG GN+FIKNLDK+ID+KA++DTFS+FG
Sbjct: 90 DAARALDILNFTPFNNKPIRIMYSHRDPSIRKSGTGNIFIKNLDKTIDHKALHDTFSSFG 149
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCKVA D G S+GYGFV F+ EEAA +I+K+NGMLLN K V+VG F+ + ER+
Sbjct: 150 NILSCKVATDSSGQSRGYGFVQFDNEEAAQNAIDKLNGMLLNDKQVYVGHFLRKHERDSA 209
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGKSRGFGFVAYESPE 254
+K F NVY+KN E +E LK +F YG ITS +M + DGKS+ FGFV +E+ +
Sbjct: 210 SNKK---FNNVYVKNLSESTTEEDLKNIFGEYGEITSAVIMRDADGKSKCFGFVNFENTD 266
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A KAV++ NGK++D K YVG+AQKK+ER ELK +FE E +++YQGVNLY+KNLD
Sbjct: 267 AAAKAVESLNGKKIDDKEWYVGKAQKKSERELELKSQFEQSMKEAVDKYQGVNLYIKNLD 326
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
DSI DE L++ F+ FG ITS K
Sbjct: 327 DSISDENLKELFSDFGMITSCK 348
Score = 137 bits (344), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 78/196 (39%), Positives = 115/196 (58%), Gaps = 11/196 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV++KNL +S + + + F +G I S + +D G SK +GFV+FE +AA K++E +
Sbjct: 216 NVYVKNLSESTTEEDLKNIFGEYGEITSAVIMRDADGKSKCFGFVNFENTDAAAKAVESL 275
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKLK 221
NG ++ K +VGK + ERE EL + + N+YIKN + +DE LK
Sbjct: 276 NGKKIDDKEWYVGKAQKKSERELELKSQFEQSMKEAVDKYQGVNLYIKNLDDSISDENLK 335
Query: 222 EMFEPYGTITSYRVMNN-DGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
E+F +G ITS +VM + G SRG GFVA+ +PE A +A+ NGK V K LYV AQ+
Sbjct: 336 ELFSDFGMITSCKVMRDPSGISRGSGFVAFSTPEEASRALAEMNGKMVVSKPLYVALAQR 395
Query: 281 KAERTQELKRRFEMLK 296
K ER L+ +F ++
Sbjct: 396 KEERRARLQAQFSQMR 411
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 123/226 (54%), Gaps = 21/226 (9%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQD-EQGNSKGYGFVHFETEEAANKSIEK 170
++++ +LD ++ + +YD F+ G ++S +V +D S GYG+V++ + + A ++++
Sbjct: 38 SLYVGDLDLNVTDSQLYDVFNQVGQVVSVRVCRDLTTRRSLGYGYVNYTSPQDAARALDI 97
Query: 171 VNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTI 230
+N N+K + + + R ++ G N++IKN + + + L + F +G I
Sbjct: 98 LNFTPFNNKPIRI-MYSHRDPSIRKSGT-----GNIFIKNLDKTIDHKALHDTFSSFGNI 151
Query: 231 TSYRV-MNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELK 289
S +V ++ G+SRG+GFV +++ E A+ A+ NG ++ K +YVG +K ER
Sbjct: 152 LSCKVATDSSGQSRGYGFVQFDNEEAAQNAIDKLNGMLLNDKQVYVGHFLRKHERDSASN 211
Query: 290 RRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSA 335
++F N+YVKNL +S +E L+ F +G ITSA
Sbjct: 212 KKFN-------------NVYVKNLSESTTEEDLKNIFGEYGEITSA 244
>gi|328773103|gb|EGF83140.1| hypothetical protein BATDEDRAFT_34010 [Batrachochytrium
dendrobatidis JAM81]
Length = 718
Score = 305 bits (780), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 144/264 (54%), Positives = 199/264 (75%), Gaps = 2/264 (0%)
Query: 74 MLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSA 133
+ D ERALDT+N+ ++G P+RIMWS RDP+LR++G GN+FIKNL +ID+KA++DTFSA
Sbjct: 116 IADAERALDTLNYTTVRGNPVRIMWSNRDPALRRAGTGNIFIKNLHTTIDHKALHDTFSA 175
Query: 134 FGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKERE 193
FG ILSCK+A D + S G+GFVH+ET E A +I+ VNGMLLN + V+VG I +KER
Sbjct: 176 FGKILSCKIAMDGE-RSLGHGFVHYETMEMAENAIKHVNGMLLNDQQVYVGLHISKKERS 234
Query: 194 KELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYES 252
+ EK FTN+Y+KN + + +EMF P+GT S +M + +G S+ FGFV YE+
Sbjct: 235 STIEEKRSKFTNIYVKNIDASVDQKAFEEMFHPFGTTVSCVLMVDEEGNSKEFGFVNYEN 294
Query: 253 PEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKN 312
E A +AV+ + KE+ GK +YVGRAQKK ER +EL+R++E ++ E+L++YQGVNL+VKN
Sbjct: 295 HEDARRAVEEMHEKEIGGKQIYVGRAQKKFEREEELRRQYEKIREEKLSKYQGVNLFVKN 354
Query: 313 LDDSIDDERLRKEFTPFGTITSAK 336
+D+SIDDE+LR+EF+ FG ITS K
Sbjct: 355 IDESIDDEKLRQEFSVFGAITSTK 378
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 73/200 (36%), Positives = 123/200 (61%), Gaps = 12/200 (6%)
Query: 106 RKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAAN 165
++S N+++KN+D S+D KA + F FG+ +SC + DE+GNSK +GFV++E E A
Sbjct: 240 KRSKFTNIYVKNIDASVDQKAFEEMFHPFGTTVSCVLMVDEEGNSKEFGFVNYENHEDAR 299
Query: 166 KSIEKVNGMLLNSKIVFVGKFIPRKEREKELG--------EKAKLF--TNVYIKNFGEDF 215
+++E+++ + K ++VG+ + ERE+EL EK + N+++KN E
Sbjct: 300 RAVEEMHEKEIGGKQIYVGRAQKKFEREEELRRQYEKIREEKLSKYQGVNLFVKNIDESI 359
Query: 216 NDEKLKEMFEPYGTITSYRVMNND--GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKIL 273
+DEKL++ F +G ITS ++M ++ G S+GFGFV + +P+ A KAV N + + K +
Sbjct: 360 DDEKLRQEFSVFGAITSTKIMVDEKTGISKGFGFVCFSNPDEATKAVTEMNNRMLANKPI 419
Query: 274 YVGRAQKKAERTQELKRRFE 293
YV AQ+K R Q+L + +
Sbjct: 420 YVALAQRKEVRRQQLAAQMQ 439
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 79/142 (55%), Gaps = 19/142 (13%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQ----RDPSLRKS-------------GVGNVFIKNL 118
D RA++ M+ + G+ I + +Q R+ LR+ GV N+F+KN+
Sbjct: 297 DARRAVEEMHEKEIGGKQIYVGRAQKKFEREEELRRQYEKIREEKLSKYQGV-NLFVKNI 355
Query: 119 DKSIDNKAMYDTFSAFGSILSCKVAQDEQ-GNSKGYGFVHFETEEAANKSIEKVNGMLLN 177
D+SID++ + FS FG+I S K+ DE+ G SKG+GFV F + A K++ ++N +L
Sbjct: 356 DESIDDEKLRQEFSVFGAITSTKIMVDEKTGISKGFGFVCFSNPDEATKAVTEMNNRMLA 415
Query: 178 SKIVFVGKFIPRKEREKELGEK 199
+K ++V ++ R ++L +
Sbjct: 416 NKPIYVALAQRKEVRRQQLAAQ 437
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 58/138 (42%), Gaps = 24/138 (17%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQ 261
++YI + + L E+F G + S RV + +S G+G++ Y AE+A+
Sbjct: 65 ASLYIGDLEPSVTEAMLFEVFNMVGPVASIRVCRDAVTRRSLGYGYINYLDIADAERALD 124
Query: 262 AWNGKEVDG---KILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSID 318
N V G +I++ R L R N+++KNL +ID
Sbjct: 125 TLNYTTVRGNPVRIMWSNRDPA-------------------LRRAGTGNIFIKNLHTTID 165
Query: 319 DERLRKEFTPFGTITSAK 336
+ L F+ FG I S K
Sbjct: 166 HKALHDTFSAFGKILSCK 183
>gi|281212216|gb|EFA86376.1| RNA-binding region RNP-1 domain-containing protein [Polysphondylium
pallidum PN500]
Length = 562
Score = 304 bits (779), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 148/262 (56%), Positives = 197/262 (75%), Gaps = 11/262 (4%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D ERALDT+N +KG+ RIMWSQRDPSLRKSG+GN+FIKNLDK++D+KA+YDTFSAFG
Sbjct: 61 DAERALDTLNNTPIKGKACRIMWSQRDPSLRKSGIGNIFIKNLDKTVDHKALYDTFSAFG 120
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCKV DE SKG+GFVH+E++E+A K+I KVNGM++N++ VFVG F KER
Sbjct: 121 NILSCKVVTDETNTSKGFGFVHYESQESAEKAIAKVNGMMINNQKVFVGPFKSSKERGAT 180
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPE 254
K +TNV+IKN ED ++++L ++ + +G IT+ +M ++ GKS+GFGF +E +
Sbjct: 181 QEVK---YTNVFIKNLSEDVSEQQLTDLLQAHGKITNLCIMTDEKGKSKGFGFANFEHAD 237
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A+ AV+ NGK GK++YVGRAQKK ER ELK +FE +YQGVNLY+KNLD
Sbjct: 238 AAKGAVENENGKMFSGKVIYVGRAQKKLEREAELKHKFE-------TKYQGVNLYIKNLD 290
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
DSID ++LR F+ +GTITS+K
Sbjct: 291 DSIDSDKLRATFSAYGTITSSK 312
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 77/194 (39%), Positives = 114/194 (58%), Gaps = 5/194 (2%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NVFIKNL + + + + D A G I + + DE+G SKG+GF +FE +AA ++E
Sbjct: 187 NVFIKNLSEDVSEQQLTDLLQAHGKITNLCIMTDEKGKSKGFGFANFEHADAAKGAVENE 246
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKL---FTNVYIKNFGEDFNDEKLKEMFEPYG 228
NG + + K+++VG+ + ERE EL K + N+YIKN + + +KL+ F YG
Sbjct: 247 NGKMFSGKVIYVGRAQKKLEREAELKHKFETKYQGVNLYIKNLDDSIDSDKLRATFSAYG 306
Query: 229 TITSYRVMNND--GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQ 286
TITS +VM +D S+GFGFV Y +P+ A KAV +G+ V K LYV AQ+K R
Sbjct: 307 TITSSKVMRDDKGSSSKGFGFVCYSTPDEASKAVAEMHGRMVGSKPLYVAFAQRKDVRRA 366
Query: 287 ELKRRFEMLKIERL 300
+L+ + K R+
Sbjct: 367 QLEAQHTKFKSSRM 380
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 62/136 (45%), Gaps = 20/136 (14%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM--NNDGKSRGFGFVAYESPEFAEKAVQ 261
+++Y+ + D ++ L E+F G + + R+ N +S + ++ Y + AE+A+
Sbjct: 8 SSLYVGDLHPDVSESHLFEVFNQVGPVANLRICRDNTTRRSLSYAYINYHNSTDAERALD 67
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGV-NLYVKNLDDSIDDE 320
N + GK + +Q+ R G+ N+++KNLD ++D +
Sbjct: 68 TLNNTPIKGKACRIMWSQRDPSL-----------------RKSGIGNIFIKNLDKTVDHK 110
Query: 321 RLRKEFTPFGTITSAK 336
L F+ FG I S K
Sbjct: 111 ALYDTFSAFGNILSCK 126
>gi|323355343|gb|EGA87168.1| Pab1p [Saccharomyces cerevisiae VL3]
Length = 563
Score = 304 bits (779), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 145/259 (55%), Positives = 193/259 (74%), Gaps = 1/259 (0%)
Query: 79 RALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSIL 138
+A++ +N+ +KGR RIMWSQRDPSLRK G GN+FIKNL IDNKA+YDTFS FG IL
Sbjct: 94 KAIEQLNYTPIKGRLCRIMWSQRDPSLRKKGSGNIFIKNLHPDIDNKALYDTFSVFGDIL 153
Query: 139 SCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGE 198
S K+A DE G SKG+GFVHFE E AA ++I+ +NGMLLN + ++V + RKER+ +L E
Sbjct: 154 SSKIATDENGKSKGFGFVHFEEEGAAKEAIDALNGMLLNGQEIYVAPHLSRKERDSQLEE 213
Query: 199 KAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGKSRGFGFVAYESPEFAE 257
+TN+Y+KN + DE+ +E+F +G I S + + DGK +GFGFV YE E A
Sbjct: 214 TKAHYTNLYVKNINSETTDEQFQELFAKFGPIVSASLEKDADGKLKGFGFVNYEKHEDAV 273
Query: 258 KAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSI 317
KAV+A N E++G+ LYVGRAQKK ER LK+++E ++E++ +YQGVNL+VKNLDDS+
Sbjct: 274 KAVEALNDSELNGEKLYVGRAQKKNERMHVLKKQYEAYRLEKMAKYQGVNLFVKNLDDSV 333
Query: 318 DDERLRKEFTPFGTITSAK 336
DDE+L +EF P+GTITSAK
Sbjct: 334 DDEKLEEEFAPYGTITSAK 352
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 81/231 (35%), Positives = 132/231 (57%), Gaps = 17/231 (7%)
Query: 80 ALDTMNFDALKGRPI----RIMWSQRDPSLR--KSGVGNVFIKNLDKSIDNKAMYDTFSA 133
A+D +N L G+ I + +RD L K+ N+++KN++ ++ + F+
Sbjct: 182 AIDALNGMLLNGQEIYVAPHLSRKERDSQLEETKAHYTNLYVKNINSETTDEQFQELFAK 241
Query: 134 FGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKERE 193
FG I+S + +D G KG+GFV++E E A K++E +N LN + ++VG+ + ER
Sbjct: 242 FGPIVSASLEKDADGKLKGFGFVNYEKHEDAVKAVEALNDSELNGEKLYVGRAQKKNERM 301
Query: 194 KELGEKAKLF----------TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GKS 242
L ++ + + N+++KN + +DEKL+E F PYGTITS +VM + GKS
Sbjct: 302 HVLKKQYEAYRLEKMAKYQGVNLFVKNLDDSVDDEKLEEEFAPYGTITSAKVMRTENGKS 361
Query: 243 RGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFE 293
+GFGFV + +PE A KA+ N + V GK LYV AQ+K R +L ++ +
Sbjct: 362 KGFGFVCFSTPEEATKAITEKNQQIVAGKPLYVAIAQRKDVRRSQLAQQIQ 412
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 121/227 (53%), Gaps = 18/227 (7%)
Query: 111 GNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSIE 169
++++ +L+ S+ +YD FS GS+ S +V +D S GY +V+F EA K+IE
Sbjct: 38 ASLYVGDLEPSVSEAHLYDIFSPIGSVSSIRVCRDAITKTSLGYAYVNFNDHEAGRKAIE 97
Query: 170 KVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGT 229
++N + ++ I +R+ L +K N++IKN D +++ L + F +G
Sbjct: 98 QLNYTPIKGRLC----RIMWSQRDPSLRKKGS--GNIFIKNLHPDIDNKALYDTFSVFGD 151
Query: 230 ITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S ++ ++ GKS+GFGFV +E A++A+ A NG ++G+ +YV + ER +L
Sbjct: 152 ILSSKIATDENGKSKGFGFVHFEEEGAAKEAIDALNGMLLNGQEIYVAPHLSRKERDSQL 211
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSA 335
+ + NLYVKN++ DE+ ++ F FG I SA
Sbjct: 212 EE----------TKAHYTNLYVKNINSETTDEQFQELFAKFGPIVSA 248
>gi|428183055|gb|EKX51914.1| hypothetical protein GUITHDRAFT_84932 [Guillardia theta CCMP2712]
Length = 616
Score = 304 bits (778), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 145/266 (54%), Positives = 201/266 (75%), Gaps = 5/266 (1%)
Query: 74 MLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSA 133
++D ERALDT+N+ +KG+ RIMW RDPS+RKSG GN+FIKNLDK++D + ++DTFS
Sbjct: 75 VVDAERALDTLNYTQIKGKACRIMWKHRDPSIRKSGAGNIFIKNLDKTVDTRTLHDTFSQ 134
Query: 134 FGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKERE 193
FG+ILSCKV+ DE NS+G+GFV FET E AN++I KVNGMLL K +FVG FIPR ERE
Sbjct: 135 FGNILSCKVSMDEHANSRGFGFVQFETAEEANEAISKVNGMLLEDKRLFVGPFIPRGERE 194
Query: 194 KELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGKSRGFGFVAYES 252
GE+ FTNVY+KNF ++ +D+ ++ FE YG ITS ++M DG S+ FGFV ++
Sbjct: 195 STNGERR--FTNVYVKNFPDNVSDDDFRKSFERYGEITSCKIMRKEDGTSKCFGFVNFKE 252
Query: 253 PEFAEKAVQAWNGKEVDG--KILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYV 310
+ A+K + NG++ G + +Y GRA+K++ER ++LK++++ +++ERL Q VNLY+
Sbjct: 253 ADDAKKCCEEMNGQKPFGGERDIYAGRAEKESERKEKLKKKYDQIRMERLKNNQLVNLYI 312
Query: 311 KNLDDSIDDERLRKEFTPFGTITSAK 336
KNLDD+IDDE+LR+ F FGTITSAK
Sbjct: 313 KNLDDTIDDEKLRQTFEQFGTITSAK 338
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/209 (34%), Positives = 111/209 (53%), Gaps = 28/209 (13%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV++KN ++ + +F +G I SCK+ + E G SK +GFV+F+ + A K E++
Sbjct: 204 NVYVKNFPDNVSDDDFRKSFERYGEITSCKIMRKEDGTSKCFGFVNFKEADDAKKCCEEM 263
Query: 172 NGM--LLNSKIVFVGKFIPRKEREKELGEKAK--------------LFTNVYIKNFGEDF 215
NG + ++ G R E+E E EK K N+YIKN +
Sbjct: 264 NGQKPFGGERDIYAG----RAEKESERKEKLKKKYDQIRMERLKNNQLVNLYIKNLDDTI 319
Query: 216 NDEKLKEMFEPYGTITSYRVMNNDGK---SRGFGFVAYESPEFAEKAVQAWNGKEVDGKI 272
+DEKL++ FE +GTITS +VM + + S+GFGFV + PE A +AV A NG+ V K
Sbjct: 320 DDEKLRQTFEQFGTITSAKVMRDKDRPEVSKGFGFVCFAQPEEATRAVTAMNGQMVGTKP 379
Query: 273 LYVGRAQKKAERTQELKRRFEMLKIERLN 301
+YV Q E++R+ + + +R N
Sbjct: 380 IYVALHQPI-----EIRRQMQAAQGQRQN 403
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 114/229 (49%), Gaps = 22/229 (9%)
Query: 111 GNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGN-SKGYGFVHFETEEAANKSIE 169
++++ +LD ++ +++ FS G + S +V +D S GY +V+F A ++++
Sbjct: 24 ASLYVGDLDPNVTEPQLFEVFSVVGPVASIRVCRDAMTRRSLGYAYVNFHNVVDAERALD 83
Query: 170 KVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGT 229
+N + K I K R+ + + N++IKN + + L + F +G
Sbjct: 84 TLNYTQIKGKAC----RIMWKHRDPSIRKSGA--GNIFIKNLDKTVDTRTLHDTFSQFGN 137
Query: 230 ITSYRV-MNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAER-TQE 287
I S +V M+ SRGFGFV +E+ E A +A+ NG ++ K L+VG + ER +
Sbjct: 138 ILSCKVSMDEHANSRGFGFVQFETAEEANEAISKVNGMLLEDKRLFVGPFIPRGERESTN 197
Query: 288 LKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+RRF N+YVKN D++ D+ RK F +G ITS K
Sbjct: 198 GERRF-------------TNVYVKNFPDNVSDDDFRKSFERYGEITSCK 233
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 62/104 (59%), Gaps = 5/104 (4%)
Query: 105 LRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGN--SKGYGFVHFETEE 162
L+ + + N++IKNLD +ID++ + TF FG+I S KV +D+ SKG+GFV F E
Sbjct: 302 LKNNQLVNLYIKNLDDTIDDEKLRQTFEQFGTITSAKVMRDKDRPEVSKGFGFVCFAQPE 361
Query: 163 AANKSIEKVNGMLLNSKIVFVGKFIP---RKEREKELGEKAKLF 203
A +++ +NG ++ +K ++V P R++ + G++ L
Sbjct: 362 EATRAVTAMNGQMVGTKPIYVALHQPIEIRRQMQAAQGQRQNLL 405
>gi|225438781|ref|XP_002283105.1| PREDICTED: polyadenylate-binding protein 2 [Vitis vinifera]
gi|296082381|emb|CBI21386.3| unnamed protein product [Vitis vinifera]
Length = 654
Score = 303 bits (776), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 152/262 (58%), Positives = 193/262 (73%), Gaps = 3/262 (1%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D RALD +NF L G+PIRIM+S RDPS+R+SG N+FIKNLDK+IDNKA+YDTFS FG
Sbjct: 85 DAARALDMLNFTPLNGKPIRIMYSFRDPSIRRSGTANIFIKNLDKAIDNKALYDTFSTFG 144
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCK+A D G SKGYGFV F+ EE+A + +K+NGMLLN K V+VG F+ ++ERE
Sbjct: 145 AILSCKIATDASGQSKGYGFVQFDNEESAKNATDKLNGMLLNDKQVYVGPFVRKQERESA 204
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGKSRGFGFVAYESPE 254
+ F NVY+KN E DE LK +F YG ITS VM + DGKS+ FGFV +E+ +
Sbjct: 205 TNKTK--FNNVYVKNLLESTTDEDLKNIFGEYGPITSAVVMQDGDGKSKCFGFVNFENAD 262
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A ++V+A NGK+ D K YVG+AQKK ER ELK RFE E ++++QG+NLYVKNLD
Sbjct: 263 DAARSVEALNGKKFDDKEWYVGKAQKKTEREVELKGRFEQSLKEAVDKFQGLNLYVKNLD 322
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
DSI D++LR+ F+ FGTITS K
Sbjct: 323 DSIADDKLRELFSEFGTITSCK 344
Score = 134 bits (336), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 80/208 (38%), Positives = 121/208 (58%), Gaps = 11/208 (5%)
Query: 100 QRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFE 159
+R+ + K+ NV++KNL +S ++ + + F +G I S V QD G SK +GFV+FE
Sbjct: 200 ERESATNKTKFNNVYVKNLLESTTDEDLKNIFGEYGPITSAVVMQDGDGKSKCFGFVNFE 259
Query: 160 TEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELG--------EKAKLFT--NVYIK 209
+ A +S+E +NG + K +VGK + ERE EL E F N+Y+K
Sbjct: 260 NADDAARSVEALNGKKFDDKEWYVGKAQKKTEREVELKGRFEQSLKEAVDKFQGLNLYVK 319
Query: 210 NFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGKSRGFGFVAYESPEFAEKAVQAWNGKEV 268
N + D+KL+E+F +GTITS +VM + +G SRG GFVA+ + E A +A+ NGK V
Sbjct: 320 NLDDSIADDKLRELFSEFGTITSCKVMRDPNGISRGSGFVAFSTAEEASRALADMNGKMV 379
Query: 269 DGKILYVGRAQKKAERTQELKRRFEMLK 296
K LYV AQ+K +R L+ +F ++
Sbjct: 380 ASKPLYVALAQRKEDRRARLQAQFSQMR 407
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 119/226 (52%), Gaps = 20/226 (8%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQD-EQGNSKGYGFVHFETEEAANKSIEK 170
++++ +L+ ++ + +YD F G ++S +V +D S GYG+V++ + A ++++
Sbjct: 33 SLYVGDLESNVTDSHLYDLFGQLGPVVSVRVCRDLSTRRSLGYGYVNYGNTQDAARALDM 92
Query: 171 VNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTI 230
+N LN K + + + R + G N++IKN + +++ L + F +G I
Sbjct: 93 LNFTPLNGKPIRI-MYSFRDPSIRRSGT-----ANIFIKNLDKAIDNKALYDTFSTFGAI 146
Query: 231 TSYRVMNN-DGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELK 289
S ++ + G+S+G+GFV +++ E A+ A NG ++ K +YVG +K ER
Sbjct: 147 LSCKIATDASGQSKGYGFVQFDNEESAKNATDKLNGMLLNDKQVYVGPFVRKQERESA-- 204
Query: 290 RRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSA 335
N+ + N+YVKNL +S DE L+ F +G ITSA
Sbjct: 205 ----------TNKTKFNNVYVKNLLESTTDEDLKNIFGEYGPITSA 240
>gi|366999420|ref|XP_003684446.1| hypothetical protein TPHA_0B03420 [Tetrapisispora phaffii CBS 4417]
gi|357522742|emb|CCE62012.1| hypothetical protein TPHA_0B03420 [Tetrapisispora phaffii CBS 4417]
Length = 579
Score = 303 bits (776), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 143/258 (55%), Positives = 195/258 (75%), Gaps = 1/258 (0%)
Query: 80 ALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILS 139
A++ +N+ +KG+P RIMWSQRDP+LRK G GN+FIKNL IDNKA++DTFS FG+ILS
Sbjct: 107 AIEKLNYSPIKGKPCRIMWSQRDPALRKKGAGNIFIKNLHPDIDNKALHDTFSVFGNILS 166
Query: 140 CKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEK 199
CK+A DE G SKG+GFVHFE + AA ++++ +NGM+LN + V+V + + +K+RE +L E
Sbjct: 167 CKIATDETGKSKGFGFVHFEEDNAAVEAVDAINGMMLNGREVYVAQHVSKKDRESKLEEV 226
Query: 200 AKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRV-MNNDGKSRGFGFVAYESPEFAEK 258
FTNVY+KN D +++ +F YG ITS + +++GK RGFGF+ +E+ + A K
Sbjct: 227 KANFTNVYVKNVDVDTPEDEFTALFSKYGPITSIAMEKDSEGKFRGFGFINFENHDDAAK 286
Query: 259 AVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSID 318
AV+ N E G+ LYVGRAQKK ER QELK+++E ++E+L +YQGVNL+VKNLDDSID
Sbjct: 287 AVEELNDLEFKGQKLYVGRAQKKYERLQELKKQYEASRLEKLAKYQGVNLFVKNLDDSID 346
Query: 319 DERLRKEFTPFGTITSAK 336
DE+L EF PFG+ITSAK
Sbjct: 347 DEKLEAEFAPFGSITSAK 364
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 78/231 (33%), Positives = 131/231 (56%), Gaps = 17/231 (7%)
Query: 80 ALDTMNFDALKGRPIRIMW--SQRDPSLR----KSGVGNVFIKNLDKSIDNKAMYDTFSA 133
A+D +N L GR + + S++D + K+ NV++KN+D FS
Sbjct: 194 AVDAINGMMLNGREVYVAQHVSKKDRESKLEEVKANFTNVYVKNVDVDTPEDEFTALFSK 253
Query: 134 FGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKERE 193
+G I S + +D +G +G+GF++FE + A K++E++N + + ++VG+ + ER
Sbjct: 254 YGPITSIAMEKDSEGKFRGFGFINFENHDDAAKAVEELNDLEFKGQKLYVGRAQKKYERL 313
Query: 194 KELG---EKAKL-------FTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKS 242
+EL E ++L N+++KN + +DEKL+ F P+G+ITS +VM N +GKS
Sbjct: 314 QELKKQYEASRLEKLAKYQGVNLFVKNLDDSIDDEKLEAEFAPFGSITSAKVMRNEEGKS 373
Query: 243 RGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFE 293
+ FGFV + +PE A KA+ N + V GK LYV AQ+K R +L ++ +
Sbjct: 374 KNFGFVCFSTPEEATKAITEKNQQIVAGKPLYVAIAQRKDVRRSQLAQQIQ 424
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 116/229 (50%), Gaps = 24/229 (10%)
Query: 111 GNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSIE 169
++++ LD S+ +YD FS G + S +V +D S GY +V+F E+ +IE
Sbjct: 50 ASLYVGELDPSVSEALLYDIFSPIGPVTSIRVCRDAITKTSLGYAYVNFNDHESGRTAIE 109
Query: 170 KVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGT 229
K+N + K I +R+ L +K N++IKN D +++ L + F +G
Sbjct: 110 KLNYSPIKGKPC----RIMWSQRDPALRKKGA--GNIFIKNLHPDIDNKALHDTFSVFGN 163
Query: 230 ITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERT--- 285
I S ++ ++ GKS+GFGFV +E A +AV A NG ++G+ +YV + K +R
Sbjct: 164 ILSCKIATDETGKSKGFGFVHFEEDNAAVEAVDAINGMMLNGREVYVAQHVSKKDRESKL 223
Query: 286 QELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITS 334
+E+K F N+YVKN+D ++ F+ +G ITS
Sbjct: 224 EEVKANF-------------TNVYVKNVDVDTPEDEFTALFSKYGPITS 259
>gi|388854914|emb|CCF51417.1| probable PAB1-mRNA polyadenylate-binding protein [Ustilago hordei]
Length = 648
Score = 303 bits (775), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 149/262 (56%), Positives = 198/262 (75%), Gaps = 2/262 (0%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D ERA++ +N+ ++ RP RIMWSQRDP+LR++G GN+FIKNLD IDNKA++DTF+AFG
Sbjct: 98 DGERAMEQLNYSLIRNRPCRIMWSQRDPALRRTGQGNIFIKNLDAGIDNKALHDTFAAFG 157
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCKVA ++ G S GYGFVH+ET EAA +I+ VNGMLLN K V+VG IPRKER+ +
Sbjct: 158 NILSCKVATNDTG-SLGYGFVHYETAEAAEAAIKHVNGMLLNDKKVYVGHHIPRKERQAK 216
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPE 254
+ E FTNVY KN + DE+ +++F YG ITS + ++DGKS+GFGFV +E E
Sbjct: 217 IEESRAKFTNVYCKNVDPEVTDEQFEKLFTNYGKITSCVLQRDDDGKSKGFGFVNFEDHE 276
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A+KAV + + G+ L+V RAQKK+ER +EL+R +E K E+L ++QGVNLY+KN+
Sbjct: 277 EAQKAVDELHDSDFHGQKLFVARAQKKSEREEELRRSYEAAKNEKLAKFQGVNLYLKNIP 336
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
+S DDERLR+EF PFGTITS K
Sbjct: 337 ESYDDERLREEFAPFGTITSCK 358
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 78/189 (41%), Positives = 116/189 (61%), Gaps = 11/189 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV+ KN+D + ++ F+ +G I SC + +D+ G SKG+GFV+FE E A K+++++
Sbjct: 226 NVYCKNVDPEVTDEQFEKLFTNYGKITSCVLQRDDDGKSKGFGFVNFEDHEEAQKAVDEL 285
Query: 172 NGMLLNSKIVFVGKFIPRKEREKEL--------GEKAKLF--TNVYIKNFGEDFNDEKLK 221
+ + + +FV + + ERE+EL EK F N+Y+KN E ++DE+L+
Sbjct: 286 HDSDFHGQKLFVARAQKKSEREEELRRSYEAAKNEKLAKFQGVNLYLKNIPESYDDERLR 345
Query: 222 EMFEPYGTITSYRVMN-NDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
E F P+GTITS ++M G SRGFGFV Y PE A KAV NGK +D + LYV AQ+
Sbjct: 346 EEFAPFGTITSCKIMRAPSGVSRGFGFVCYSVPEEANKAVSEMNGKMLDNRPLYVALAQR 405
Query: 281 KAERTQELK 289
K R Q+L+
Sbjct: 406 KDVRRQQLE 414
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 116/225 (51%), Gaps = 17/225 (7%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSIEK 170
++++ LD S+ +++ F+ G + S +V +D S GY +V+F +++E+
Sbjct: 46 SLYVGELDPSVTEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNFLNAADGERAMEQ 105
Query: 171 VNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTI 230
+N L+ ++ I +R+ L + N++IKN +++ L + F +G I
Sbjct: 106 LNYSLIRNRPC----RIMWSQRDPALRRTGQ--GNIFIKNLDAGIDNKALHDTFAAFGNI 159
Query: 231 TSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKR 290
S +V ND S G+GFV YE+ E AE A++ NG ++ K +YVG + R
Sbjct: 160 LSCKVATNDTGSLGYGFVHYETAEAAEAAIKHVNGMLLNDKKVYVG---------HHIPR 210
Query: 291 RFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSA 335
+ KIE +R + N+Y KN+D + DE+ K FT +G ITS
Sbjct: 211 KERQAKIEE-SRAKFTNVYCKNVDPEVTDEQFEKLFTNYGKITSC 254
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 74/125 (59%), Gaps = 18/125 (14%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQ----RDPSLRKS-------------GVGNVFIKNL 118
+ ++A+D ++ G+ + + +Q R+ LR+S GV N+++KN+
Sbjct: 277 EAQKAVDELHDSDFHGQKLFVARAQKKSEREEELRRSYEAAKNEKLAKFQGV-NLYLKNI 335
Query: 119 DKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNS 178
+S D++ + + F+ FG+I SCK+ + G S+G+GFV + E ANK++ ++NG +L++
Sbjct: 336 PESYDDERLREEFAPFGTITSCKIMRAPSGVSRGFGFVCYSVPEEANKAVSEMNGKMLDN 395
Query: 179 KIVFV 183
+ ++V
Sbjct: 396 RPLYV 400
Score = 40.8 bits (94), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 57/135 (42%), Gaps = 18/135 (13%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQ 261
T++Y+ + L E+F G + S RV + +S G+ +V + + E+A++
Sbjct: 45 TSLYVGELDPSVTEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNFLNAADGERAME 104
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDER 321
N + + + +Q+ L R N+++KNLD ID++
Sbjct: 105 QLNYSLIRNRPCRIMWSQRDPA----------------LRRTGQGNIFIKNLDAGIDNKA 148
Query: 322 LRKEFTPFGTITSAK 336
L F FG I S K
Sbjct: 149 LHDTFAAFGNILSCK 163
>gi|317106693|dbj|BAJ53194.1| JHL03K20.3 [Jatropha curcas]
Length = 642
Score = 302 bits (774), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 150/262 (57%), Positives = 197/262 (75%), Gaps = 3/262 (1%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D +AL+ +NF + G+PIRIM+S RDP++RKSG GN++IKNLDK+IDNKA++DTFSAFG
Sbjct: 82 DAAQALEVLNFTPVNGKPIRIMYSYRDPTIRKSGAGNIYIKNLDKAIDNKALHDTFSAFG 141
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCKVA D G S GYGFV F+ EE+A +I+K+NGMLLN K V+VG F+ R+ERE
Sbjct: 142 NILSCKVATDSAGQSLGYGFVQFDNEESAKNAIDKLNGMLLNDKQVYVGPFLRRQERES- 200
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPE 254
G F NVY+KN E +E LK++F YG ITS VM + DGKSR FGFV +E+P+
Sbjct: 201 -GTDKTKFNNVYVKNLSETTTEEDLKKIFGEYGAITSAVVMRDGDGKSRCFGFVNFENPD 259
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A ++V+A NGK D K YVG+AQKK+ER ELK +FE E +++++G+NLYVKNLD
Sbjct: 260 DAARSVEALNGKTFDEKEWYVGKAQKKSEREVELKGQFEQTLKETVDKFEGLNLYVKNLD 319
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
DSI D++L++ F+ FGTITS K
Sbjct: 320 DSITDDKLKELFSEFGTITSCK 341
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/208 (37%), Positives = 119/208 (57%), Gaps = 11/208 (5%)
Query: 100 QRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFE 159
+R+ K+ NV++KNL ++ + + F +G+I S V +D G S+ +GFV+FE
Sbjct: 197 ERESGTDKTKFNNVYVKNLSETTTEEDLKKIFGEYGAITSAVVMRDGDGKSRCFGFVNFE 256
Query: 160 TEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELG--------EKAKLF--TNVYIK 209
+ A +S+E +NG + K +VGK + ERE EL E F N+Y+K
Sbjct: 257 NPDDAARSVEALNGKTFDEKEWYVGKAQKKSEREVELKGQFEQTLKETVDKFEGLNLYVK 316
Query: 210 NFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGKSRGFGFVAYESPEFAEKAVQAWNGKEV 268
N + D+KLKE+F +GTITS +VM + +G S+G GFVAY + E A KA+ NGK +
Sbjct: 317 NLDDSITDDKLKELFSEFGTITSCKVMRDPNGVSKGSGFVAYSTAEEASKALTEMNGKMI 376
Query: 269 DGKILYVGRAQKKAERTQELKRRFEMLK 296
K LYV AQ+K ER L+ +F ++
Sbjct: 377 VSKPLYVALAQRKEERRARLQAQFSQMR 404
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 121/227 (53%), Gaps = 22/227 (9%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQD-EQGNSKGYGFVHFETEEAANKSIEK 170
++++ +L++++ +YD F+ G I+S +V +D S GYG+V++ A +++E
Sbjct: 30 SLYVGDLEQNVTETQLYDLFNQLGQIVSIRVCRDLTSRRSLGYGYVNYNNVHDAAQALEV 89
Query: 171 VNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTI 230
+N +N K + + + R ++ G N+YIKN + +++ L + F +G I
Sbjct: 90 LNFTPVNGKPIRI-MYSYRDPTIRKSGAG-----NIYIKNLDKAIDNKALHDTFSAFGNI 143
Query: 231 TSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL- 288
S +V + G+S G+GFV +++ E A+ A+ NG ++ K +YVG ++ ER
Sbjct: 144 LSCKVATDSAGQSLGYGFVQFDNEESAKNAIDKLNGMLLNDKQVYVGPFLRRQERESGTD 203
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSA 335
K +F N+YVKNL ++ +E L+K F +G ITSA
Sbjct: 204 KTKFN-------------NVYVKNLSETTTEEDLKKIFGEYGAITSA 237
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 65/135 (48%), Gaps = 18/135 (13%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQ 261
T++Y+ + ++ + +L ++F G I S RV + +S G+G+V Y + A +A++
Sbjct: 29 TSLYVGDLEQNVTETQLYDLFNQLGQIVSIRVCRDLTSRRSLGYGYVNYNNVHDAAQALE 88
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDER 321
N V+GK + R + + + N+Y+KNLD +ID++
Sbjct: 89 VLNFTPVNGKPI----------------RIMYSYRDPTIRKSGAGNIYIKNLDKAIDNKA 132
Query: 322 LRKEFTPFGTITSAK 336
L F+ FG I S K
Sbjct: 133 LHDTFSAFGNILSCK 147
>gi|356564176|ref|XP_003550332.1| PREDICTED: polyadenylate-binding protein 2-like [Glycine max]
Length = 654
Score = 302 bits (774), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 154/262 (58%), Positives = 193/262 (73%), Gaps = 3/262 (1%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D RALD +NF L R IRIM+S RDPSLRKSG N+FIKNLDK+ID+KA++DTFS+FG
Sbjct: 88 DAARALDVLNFTPLNNRSIRIMYSHRDPSLRKSGTANIFIKNLDKAIDHKALHDTFSSFG 147
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
ILSCK+A D G SKGYGFV F+ EEAA +I+K+NGML+N K V+VG F+ +++RE
Sbjct: 148 LILSCKIATDASGLSKGYGFVQFDNEEAAQNAIDKLNGMLINDKQVYVGHFLRKQDRENA 207
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGKSRGFGFVAYESPE 254
L K K F NVY+KN E DE+L F YGTITS +M + DGKSR FGFV +E+P+
Sbjct: 208 L-SKTK-FNNVYVKNLSESTTDEELMINFGEYGTITSALIMRDADGKSRCFGFVNFENPD 265
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A KAV+ NGK+ D K YVG+AQKK+ER QELK RFE E ++Y G+NLY+KNLD
Sbjct: 266 DAAKAVEGLNGKKFDDKEWYVGKAQKKSEREQELKGRFEQSIKEAADKYPGLNLYLKNLD 325
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
D+I DE+L++ F +GTITS K
Sbjct: 326 DTISDEKLKEMFADYGTITSCK 347
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 84/207 (40%), Positives = 124/207 (59%), Gaps = 11/207 (5%)
Query: 101 RDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFET 160
R+ +L K+ NV++KNL +S ++ + F +G+I S + +D G S+ +GFV+FE
Sbjct: 204 RENALSKTKFNNVYVKNLSESTTDEELMINFGEYGTITSALIMRDADGKSRCFGFVNFEN 263
Query: 161 EEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELG--------EKAKLFT--NVYIKN 210
+ A K++E +NG + K +VGK + ERE+EL E A + N+Y+KN
Sbjct: 264 PDDAAKAVEGLNGKKFDDKEWYVGKAQKKSEREQELKGRFEQSIKEAADKYPGLNLYLKN 323
Query: 211 FGEDFNDEKLKEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVD 269
+ +DEKLKEMF YGTITS +VM + G SRG GFVA+ +PE A +A+ NGK
Sbjct: 324 LDDTISDEKLKEMFADYGTITSCKVMRDPTGISRGSGFVAFSTPEEATRALGEMNGKMFA 383
Query: 270 GKILYVGRAQKKAERTQELKRRFEMLK 296
GK LYV AQ+K ER L+ +F ++
Sbjct: 384 GKPLYVALAQRKEERRARLQAQFSQMR 410
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 123/227 (54%), Gaps = 22/227 (9%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQD-EQGNSKGYGFVHFETEEAANKSIEK 170
++++ +LD+++++ +YD F+ G ++S +V +D S GYG+V+F + A ++++
Sbjct: 36 SLYVGDLDQNVNDSQLYDLFNQVGQVVSVRVCRDLTTRRSLGYGYVNFSNPQDAARALDV 95
Query: 171 VNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTI 230
+N LN++ + I R+ L + N++IKN + + + L + F +G I
Sbjct: 96 LNFTPLNNRSI----RIMYSHRDPSLRKSGT--ANIFIKNLDKAIDHKALHDTFSSFGLI 149
Query: 231 TSYRVMNN-DGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL- 288
S ++ + G S+G+GFV +++ E A+ A+ NG ++ K +YVG +K +R L
Sbjct: 150 LSCKIATDASGLSKGYGFVQFDNEEAAQNAIDKLNGMLINDKQVYVGHFLRKQDRENALS 209
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSA 335
K +F N+YVKNL +S DE L F +GTITSA
Sbjct: 210 KTKFN-------------NVYVKNLSESTTDEELMINFGEYGTITSA 243
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 66/135 (48%), Gaps = 18/135 (13%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQ 261
T++Y+ + ++ ND +L ++F G + S RV + +S G+G+V + +P+ A +A+
Sbjct: 35 TSLYVGDLDQNVNDSQLYDLFNQVGQVVSVRVCRDLTTRRSLGYGYVNFSNPQDAARALD 94
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDER 321
N ++ + + + + + L + N+++KNLD +ID +
Sbjct: 95 VLNFTPLNNRSIRIMYSHRDPS----------------LRKSGTANIFIKNLDKAIDHKA 138
Query: 322 LRKEFTPFGTITSAK 336
L F+ FG I S K
Sbjct: 139 LHDTFSSFGLILSCK 153
>gi|225428865|ref|XP_002285190.1| PREDICTED: polyadenylate-binding protein 2 [Vitis vinifera]
gi|147839912|emb|CAN65906.1| hypothetical protein VITISV_004873 [Vitis vinifera]
Length = 648
Score = 302 bits (774), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 150/262 (57%), Positives = 196/262 (74%), Gaps = 3/262 (1%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D RALD +NF L G+PIRIM+S RDPS+RKSG GN+FIKNLDK ID+KA++DTFSAFG
Sbjct: 83 DAARALDVLNFTPLNGKPIRIMYSHRDPSIRKSGTGNIFIKNLDKGIDHKALHDTFSAFG 142
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCKVA D G SKG+GFV F++EEAA K+I+K+NGMLLN K VFVG F+ ++ERE
Sbjct: 143 NILSCKVATDASGMSKGHGFVQFDSEEAAQKAIDKLNGMLLNDKQVFVGPFVRKQEREST 202
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPE 254
+ ++ F NV++KN E +E L +F +G ITS VM + DGKS+ FGFV +E+ +
Sbjct: 203 INKEK--FNNVFVKNISEGMTEEDLTRIFGEFGPITSVVVMRDGDGKSKCFGFVNFENVD 260
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A +V+A NG++ D K YVG+AQKK+ER ELK RFE E ++++QG NLY+KNLD
Sbjct: 261 DAAMSVEALNGQKFDDKEWYVGKAQKKSEREIELKSRFEQNMKEAVDKFQGANLYIKNLD 320
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
DSI D++L++ F FGTITS K
Sbjct: 321 DSIGDDKLKELFAQFGTITSCK 342
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 82/208 (39%), Positives = 118/208 (56%), Gaps = 11/208 (5%)
Query: 100 QRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFE 159
+R+ ++ K NVF+KN+ + + + + F FG I S V +D G SK +GFV+FE
Sbjct: 198 ERESTINKEKFNNVFVKNISEGMTEEDLTRIFGEFGPITSVVVMRDGDGKSKCFGFVNFE 257
Query: 160 TEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELG--------EKAKLF--TNVYIK 209
+ A S+E +NG + K +VGK + ERE EL E F N+YIK
Sbjct: 258 NVDDAAMSVEALNGQKFDDKEWYVGKAQKKSEREIELKSRFEQNMKEAVDKFQGANLYIK 317
Query: 210 NFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGKSRGFGFVAYESPEFAEKAVQAWNGKEV 268
N + D+KLKE+F +GTITS +VM + +G SRG GFVA+ SPE A +A+ N K V
Sbjct: 318 NLDDSIGDDKLKELFAQFGTITSCKVMRDPNGLSRGSGFVAFSSPEEASRALAEMNSKMV 377
Query: 269 DGKILYVGRAQKKAERTQELKRRFEMLK 296
K LYV AQ+K +R L+ +F ++
Sbjct: 378 VSKPLYVALAQRKEDRRARLQAQFSQMR 405
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 123/225 (54%), Gaps = 20/225 (8%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQD-EQGNSKGYGFVHFETEEAANKSIEK 170
++++ +L+ ++++ +YD FS G+++S +V +D S GYG+V++ + A ++++
Sbjct: 31 SLYVGDLELNVNDSQLYDLFSQMGAVVSVRVCRDLSTRRSLGYGYVNYSNPQDAARALDV 90
Query: 171 VNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTI 230
+N LN K + + + R ++ G N++IKN + + + L + F +G I
Sbjct: 91 LNFTPLNGKPIRI-MYSHRDPSIRKSGT-----GNIFIKNLDKGIDHKALHDTFSAFGNI 144
Query: 231 TSYRVMNN-DGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELK 289
S +V + G S+G GFV ++S E A+KA+ NG ++ K ++VG +K ER +
Sbjct: 145 LSCKVATDASGMSKGHGFVQFDSEEAAQKAIDKLNGMLLNDKQVFVGPFVRKQERESTIN 204
Query: 290 RRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITS 334
+ E+ N N++VKN+ + + +E L + F FG ITS
Sbjct: 205 K-------EKFN-----NVFVKNISEGMTEEDLTRIFGEFGPITS 237
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 65/135 (48%), Gaps = 18/135 (13%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQ 261
T++Y+ + + ND +L ++F G + S RV + +S G+G+V Y +P+ A +A+
Sbjct: 30 TSLYVGDLELNVNDSQLYDLFSQMGAVVSVRVCRDLSTRRSLGYGYVNYSNPQDAARALD 89
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDER 321
N ++GK + + + + + + N+++KNLD ID +
Sbjct: 90 VLNFTPLNGKPIRIMYSHRDPS----------------IRKSGTGNIFIKNLDKGIDHKA 133
Query: 322 LRKEFTPFGTITSAK 336
L F+ FG I S K
Sbjct: 134 LHDTFSAFGNILSCK 148
>gi|115520925|gb|ABJ08845.1| putative polyadenylate-binding protein 1 [Squalus acanthias]
Length = 212
Score = 302 bits (774), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 148/213 (69%), Positives = 175/213 (82%), Gaps = 2/213 (0%)
Query: 81 LDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSC 140
LDTMN D +KG+P+RIMWSQRDPSLRKSGVGN+FIKNLDKSIDNKA+YDTFSAFG+ILSC
Sbjct: 1 LDTMNSDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSC 60
Query: 141 KVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKA 200
KV DE G SKGYGFVHFET EAA ++IEK+NGMLLN + VFVG+F RKERE ELG KA
Sbjct: 61 KVVCDENG-SKGYGFVHFETHEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGAKA 119
Query: 201 KLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAEKA 259
K FTNVYIKNFGED +DE+LKE+F +G S +VM +D G+S+GFGFV++E E A+KA
Sbjct: 120 KEFTNVYIKNFGEDMDDERLKEIFNKFGAFLSVKVMTDDSGRSKGFGFVSFEKHEDAQKA 179
Query: 260 VQAWNGKEVDGKILYVGRAQKKAERTQELKRRF 292
V NGKE++G+ +YVG K ER ELKR+F
Sbjct: 180 VDEMNGKEINGRQVYVGPCPXKVERQTELKRKF 212
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 77/132 (58%), Gaps = 10/132 (7%)
Query: 205 NVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWN 264
N++IKN + +++ L + F +G I S +V+ ++ S+G+GFV +E+ E AE+A++ N
Sbjct: 32 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETHEAAERAIEKMN 91
Query: 265 GKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRK 324
G ++ + ++VGR + + ER EL + + N+Y+KN + +DDERL++
Sbjct: 92 GMLLNDRKVFVGRFKSRKEREAELGAKAKEF----------TNVYIKNFGEDMDDERLKE 141
Query: 325 EFTPFGTITSAK 336
F FG S K
Sbjct: 142 IFNKFGAFLSVK 153
>gi|297741250|emb|CBI32381.3| unnamed protein product [Vitis vinifera]
Length = 766
Score = 301 bits (772), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 150/262 (57%), Positives = 196/262 (74%), Gaps = 3/262 (1%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D RALD +NF L G+PIRIM+S RDPS+RKSG GN+FIKNLDK ID+KA++DTFSAFG
Sbjct: 222 DAARALDVLNFTPLNGKPIRIMYSHRDPSIRKSGTGNIFIKNLDKGIDHKALHDTFSAFG 281
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCKVA D G SKG+GFV F++EEAA K+I+K+NGMLLN K VFVG F+ ++ERE
Sbjct: 282 NILSCKVATDASGMSKGHGFVQFDSEEAAQKAIDKLNGMLLNDKQVFVGPFVRKQEREST 341
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPE 254
+ ++ F NV++KN E +E L +F +G ITS VM + DGKS+ FGFV +E+ +
Sbjct: 342 INKEK--FNNVFVKNISEGMTEEDLTRIFGEFGPITSVVVMRDGDGKSKCFGFVNFENVD 399
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A +V+A NG++ D K YVG+AQKK+ER ELK RFE E ++++QG NLY+KNLD
Sbjct: 400 DAAMSVEALNGQKFDDKEWYVGKAQKKSEREIELKSRFEQNMKEAVDKFQGANLYIKNLD 459
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
DSI D++L++ F FGTITS K
Sbjct: 460 DSIGDDKLKELFAQFGTITSCK 481
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 86/235 (36%), Positives = 129/235 (54%), Gaps = 15/235 (6%)
Query: 77 TERALDTMNFDALKGRPIRI----MWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFS 132
++A+D +N L + + + +R+ ++ K NVF+KN+ + + + + F
Sbjct: 310 AQKAIDKLNGMLLNDKQVFVGPFVRKQERESTINKEKFNNVFVKNISEGMTEEDLTRIFG 369
Query: 133 AFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKER 192
FG I S V +D G SK +GFV+FE + A S+E +NG + K +VGK + ER
Sbjct: 370 EFGPITSVVVMRDGDGKSKCFGFVNFENVDDAAMSVEALNGQKFDDKEWYVGKAQKKSER 429
Query: 193 EKELG--------EKAKLF--TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGK 241
E EL E F N+YIKN + D+KLKE+F +GTITS +VM + +G
Sbjct: 430 EIELKSRFEQNMKEAVDKFQGANLYIKNLDDSIGDDKLKELFAQFGTITSCKVMRDPNGL 489
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLK 296
SRG GFVA+ SPE A +A+ N K V K LYV AQ+K +R L+ +F ++
Sbjct: 490 SRGSGFVAFSSPEEASRALAEMNSKMVVSKPLYVALAQRKEDRRARLQAQFSQMR 544
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 120/226 (53%), Gaps = 20/226 (8%)
Query: 111 GNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGN-SKGYGFVHFETEEAANKSIE 169
++++ +LD ++ + ++D FS ++S +V +D + S GYG+V++ E A ++++
Sbjct: 169 ASLYVGDLDLNVTDSQLHDLFSQLAQVVSIRVCRDSTTHRSLGYGYVNYTDLEDAARALD 228
Query: 170 KVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGT 229
+N LN K + I R+ + + N++IKN + + + L + F +G
Sbjct: 229 VLNFTPLNGKPI----RIMYSHRDPSIRKSGT--GNIFIKNLDKGIDHKALHDTFSAFGN 282
Query: 230 ITSYRVMNN-DGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S +V + G S+G GFV ++S E A+KA+ NG ++ K ++VG +K ER +
Sbjct: 283 ILSCKVATDASGMSKGHGFVQFDSEEAAQKAIDKLNGMLLNDKQVFVGPFVRKQERESTI 342
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITS 334
+ E+ N N++VKN+ + + +E L + F FG ITS
Sbjct: 343 NK-------EKFN-----NVFVKNISEGMTEEDLTRIFGEFGPITS 376
Score = 41.6 bits (96), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 37/170 (21%), Positives = 74/170 (43%), Gaps = 37/170 (21%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQ 261
T++Y+ + + ND +L ++F G + S RV + +S G+G+V Y +P+ ++
Sbjct: 30 TSLYVGDLELNVNDSQLYDLFSQMGAVVSVRVCRDLSTRRSLGYGYVNYSNPQDEKEKET 89
Query: 262 AWNGKEVDGKIL------------YVGRAQKKAERTQELKRR--------FEMLKIER-- 299
+ G V I Y+ + ++ ER EL++R EM +++
Sbjct: 90 IYEGFCVFCLIPSNYAIFFVLGFSYIHKKRRGKERGGELQKRELNFLRVGGEMAEVQDHE 149
Query: 300 -------------LNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+R+ +LYV +LD ++ D +L F+ + S +
Sbjct: 150 GLLSGTNDEPNIGPSRFASASLYVGDLDLNVTDSQLHDLFSQLAQVVSIR 199
>gi|398327|emb|CAA81127.1| poly(A)-mRNA binding protein [Anemia phyllitidis]
Length = 638
Score = 301 bits (772), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 149/262 (56%), Positives = 197/262 (75%), Gaps = 4/262 (1%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D +AL+ +NF +KG+PIRIM+S RDPS+RKSG N+FIKNL+KSIDNKA++DTFSAFG
Sbjct: 79 DASQALELLNFTLVKGKPIRIMYSHRDPSIRKSGAANIFIKNLEKSIDNKALHDTFSAFG 138
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSC+V D+ GNSKGYGFV FE EE+A +IEKVNGML+N + V V FI ++ER+
Sbjct: 139 TILSCRVVMDDAGNSKGYGFVQFEKEESAQIAIEKVNGMLINDRQVSVAPFIRKQERDM- 197
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGKSRGFGFVAYESPE 254
+K F NVY+KN E DE L+++F +G I+S VM + DGKS+ FGFV +E+ +
Sbjct: 198 --ASSKNFNNVYVKNLAEATTDEDLRKVFAGFGPISSAVVMRDADGKSKCFGFVNFENVD 255
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A AV+ NGK ++ K YVGRAQKK+ER ELK +FE ++ E+ ++QGVNLY+KN+D
Sbjct: 256 DAANAVENLNGKLINEKEWYVGRAQKKSEREAELKAKFEQVRKEKEEKFQGVNLYLKNID 315
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
DSIDDE+LR+ F FGT+TS K
Sbjct: 316 DSIDDEKLRELFAVFGTVTSCK 337
Score = 140 bits (353), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 80/197 (40%), Positives = 119/197 (60%), Gaps = 11/197 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV++KNL ++ ++ + F+ FG I S V +D G SK +GFV+FE + A ++E +
Sbjct: 205 NVYVKNLAEATTDEDLRKVFAGFGPISSAVVMRDADGKSKCFGFVNFENVDDAANAVENL 264
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELG--------EKAKLF--TNVYIKNFGEDFNDEKLK 221
NG L+N K +VG+ + ERE EL EK + F N+Y+KN + +DEKL+
Sbjct: 265 NGKLINEKEWYVGRAQKKSEREAELKAKFEQVRKEKEEKFQGVNLYLKNIDDSIDDEKLR 324
Query: 222 EMFEPYGTITSYRVMNN-DGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
E+F +GT+TS +VM + G+S G GFV + +PE A +AV NGK V K LYV AQ+
Sbjct: 325 ELFAVFGTVTSCKVMKSPQGQSMGSGFVTFSAPEEAMQAVNDMNGKMVGSKPLYVALAQR 384
Query: 281 KAERTQELKRRFEMLKI 297
K ER L+ +F ++I
Sbjct: 385 KEERRARLQAQFAQMQI 401
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/250 (28%), Positives = 131/250 (52%), Gaps = 28/250 (11%)
Query: 95 RIMWSQRDPSLRKSGVGN-------VFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQ 147
++M +Q+ P++ G+ +++ +LD + +Y+ F+ G ++S +V +D
Sbjct: 3 QVMQAQQAPTIATPISGSSPYVAPSLYVGDLDPDVSESELYEVFNQIGQVVSIRVCRDLM 62
Query: 148 G-NSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNV 206
S GY +V++ T + A++++E +N L+ K + + + R ++ G N+
Sbjct: 63 TKKSLGYAYVNYGTHQDASQALELLNFTLVKGKPIRI-MYSHRDPSIRKSGA-----ANI 116
Query: 207 YIKNFGEDFNDEKLKEMFEPYGTITSYR-VMNNDGKSRGFGFVAYESPEFAEKAVQAWNG 265
+IKN + +++ L + F +GTI S R VM++ G S+G+GFV +E E A+ A++ NG
Sbjct: 117 FIKNLEKSIDNKALHDTFSAFGTILSCRVVMDDAGNSKGYGFVQFEKEESAQIAIEKVNG 176
Query: 266 KEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKE 325
++ + + V +K ER + F N+YVKNL ++ DE LRK
Sbjct: 177 MLINDRQVSVAPFIRKQERDMASSKNFN-------------NVYVKNLAEATTDEDLRKV 223
Query: 326 FTPFGTITSA 335
F FG I+SA
Sbjct: 224 FAGFGPISSA 233
>gi|45201218|ref|NP_986788.1| AGR122Cp [Ashbya gossypii ATCC 10895]
gi|74691820|sp|Q74ZS6.1|PABP_ASHGO RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|44986072|gb|AAS54612.1| AGR122Cp [Ashbya gossypii ATCC 10895]
gi|374110037|gb|AEY98942.1| FAGR122Cp [Ashbya gossypii FDAG1]
Length = 585
Score = 301 bits (771), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 145/259 (55%), Positives = 196/259 (75%), Gaps = 1/259 (0%)
Query: 79 RALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSIL 138
+A++ +N+ +KG+P RIMWSQRDPSLRK G GN++IKNL +IDNK++++TFS FG+IL
Sbjct: 94 KAIEQLNYTLIKGKPCRIMWSQRDPSLRKKGSGNIYIKNLHPAIDNKSLHETFSTFGNIL 153
Query: 139 SCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGE 198
SCKVA DE G S+G+GFVHFE E A +IE V+GML+N + V+V + +K+R+ +L E
Sbjct: 154 SCKVATDENGVSRGFGFVHFENESDARDAIEAVDGMLMNDQEVYVALHVSKKDRQSKLEE 213
Query: 199 KAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRV-MNNDGKSRGFGFVAYESPEFAE 257
FTNVY+KN ++ + E+ +E+F YG ITS + +++GK RGFGFV +E A
Sbjct: 214 VKAKFTNVYVKNIDQETSQEEFEELFGKYGKITSAVLEKDSEGKLRGFGFVNFEDHAAAA 273
Query: 258 KAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSI 317
KAV N E G+ LYVGRAQKK ER QELK+++E ++E+L +YQGVNL+VKNLDDSI
Sbjct: 274 KAVDELNELEFKGQKLYVGRAQKKYERLQELKKQYEAARLEKLAKYQGVNLFVKNLDDSI 333
Query: 318 DDERLRKEFTPFGTITSAK 336
DDE+L++EF PFGTITSAK
Sbjct: 334 DDEKLKEEFAPFGTITSAK 352
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 74/198 (37%), Positives = 119/198 (60%), Gaps = 11/198 (5%)
Query: 107 KSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANK 166
K+ NV++KN+D+ + + F +G I S + +D +G +G+GFV+FE AA K
Sbjct: 215 KAKFTNVYVKNIDQETSQEEFEELFGKYGKITSAVLEKDSEGKLRGFGFVNFEDHAAAAK 274
Query: 167 SIEKVNGMLLNSKIVFVGKFIPRKEREKELG---EKAKL-------FTNVYIKNFGEDFN 216
+++++N + + ++VG+ + ER +EL E A+L N+++KN + +
Sbjct: 275 AVDELNELEFKGQKLYVGRAQKKYERLQELKKQYEAARLEKLAKYQGVNLFVKNLDDSID 334
Query: 217 DEKLKEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYV 275
DEKLKE F P+GTITS +VM ++ G SRGFGFV + +PE A KA+ N + V GK LYV
Sbjct: 335 DEKLKEEFAPFGTITSAKVMRDETGNSRGFGFVCFSTPEEATKAITEKNQQIVAGKPLYV 394
Query: 276 GRAQKKAERTQELKRRFE 293
AQ+K R +L ++ +
Sbjct: 395 AIAQRKEVRRNQLAQQIQ 412
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 76/238 (31%), Positives = 122/238 (51%), Gaps = 25/238 (10%)
Query: 103 PSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGN-SKGYGFVHFETE 161
P + SG ++++ L+ ++ +YD FS GS+ S +V +D N S GY +V+F
Sbjct: 31 PKVETSGA-SLYVGELEPTVSEALLYDIFSPIGSVSSIRVCRDAITNTSLGYAYVNFHDH 89
Query: 162 EAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLK 221
EA K+IE++N L+ K I +R+ L +K N+YIKN +++ L
Sbjct: 90 EAGPKAIEQLNYTLIKGKPC----RIMWSQRDPSLRKKGS--GNIYIKNLHPAIDNKSLH 143
Query: 222 EMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
E F +G I S +V ++ G SRGFGFV +E+ A A++A +G ++ + +YV
Sbjct: 144 ETFSTFGNILSCKVATDENGVSRGFGFVHFENESDARDAIEAVDGMLMNDQEVYVALHVS 203
Query: 281 KAERT---QELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSA 335
K +R +E+K +F N+YVKN+D E + F +G ITSA
Sbjct: 204 KKDRQSKLEEVKAKF-------------TNVYVKNIDQETSQEEFEELFGKYGKITSA 248
>gi|414588971|tpg|DAA39542.1| TPA: hypothetical protein ZEAMMB73_983793 [Zea mays]
Length = 648
Score = 301 bits (771), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 151/262 (57%), Positives = 195/262 (74%), Gaps = 3/262 (1%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D RAL+ +NF + G+PIRIM+S RDPS RKSG GN+FIKNLDKSIDNKA+YDTF AFG
Sbjct: 88 DAARALELLNFTPINGKPIRIMYSNRDPSSRKSGTGNIFIKNLDKSIDNKALYDTFCAFG 147
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCK+A D G S+GYGFV FE +E+A +I+K+NGML+N K VFVG F+ +++RE
Sbjct: 148 NILSCKIATDPSGESRGYGFVQFEKDESAQSAIDKLNGMLINDKKVFVGPFVRKQDREN- 206
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPE 254
+ K F+NVY+KN + D++LKEMF YGTITS VM ++DGKSR FGFV +E+ +
Sbjct: 207 VSSNIK-FSNVYVKNLSDTVTDDELKEMFGKYGTITSAVVMRDSDGKSRCFGFVNFENAD 265
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A +AVQ NGK + K LYVGRAQKK+ER ELK +FE E ++Q NLY+KNL+
Sbjct: 266 AAAQAVQELNGKIFNDKELYVGRAQKKSEREMELKEKFEKNVQEVAEKFQNTNLYLKNLE 325
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
++IDDE+LR+ F +G ITS K
Sbjct: 326 ENIDDEKLRELFAEYGNITSCK 347
Score = 148 bits (373), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 80/196 (40%), Positives = 127/196 (64%), Gaps = 11/196 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV++KNL ++ + + + F +G+I S V +D G S+ +GFV+FE +AA ++++++
Sbjct: 215 NVYVKNLSDTVTDDELKEMFGKYGTITSAVVMRDSDGKSRCFGFVNFENADAAAQAVQEL 274
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEK--------AKLF--TNVYIKNFGEDFNDEKLK 221
NG + N K ++VG+ + ERE EL EK A+ F TN+Y+KN E+ +DEKL+
Sbjct: 275 NGKIFNDKELYVGRAQKKSEREMELKEKFEKNVQEVAEKFQNTNLYLKNLEENIDDEKLR 334
Query: 222 EMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
E+F YG ITS +VM +++G SRG GFVA++S E A +A+ NGK V K LYV AQ+
Sbjct: 335 ELFAEYGNITSCKVMRDSNGVSRGSGFVAFKSAEDANRALTEMNGKMVGSKPLYVALAQR 394
Query: 281 KAERTQELKRRFEMLK 296
K +R +L+ +F ++
Sbjct: 395 KEDRKAKLQAQFSQMR 410
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 122/227 (53%), Gaps = 22/227 (9%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQD-EQGNSKGYGFVHFETEEAANKSIEK 170
++++ +L +S+ + ++D FS G ++S +V +D S GY +V++ + A +++E
Sbjct: 36 SLYVGDLHESVQDAQLFDVFSQVGGVVSVRVCRDINSRKSLGYAYVNYNNQGDAARALEL 95
Query: 171 VNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTI 230
+N +N K + + + R ++ G N++IKN + +++ L + F +G I
Sbjct: 96 LNFTPINGKPIRI-MYSNRDPSSRKSGT-----GNIFIKNLDKSIDNKALYDTFCAFGNI 149
Query: 231 TSYRVMNN-DGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELK 289
S ++ + G+SRG+GFV +E E A+ A+ NG ++ K ++VG +K +R
Sbjct: 150 LSCKIATDPSGESRGYGFVQFEKDESAQSAIDKLNGMLINDKKVFVGPFVRKQDRENVSS 209
Query: 290 R-RFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSA 335
+F N+YVKNL D++ D+ L++ F +GTITSA
Sbjct: 210 NIKFS-------------NVYVKNLSDTVTDDELKEMFGKYGTITSA 243
>gi|414588970|tpg|DAA39541.1| TPA: hypothetical protein ZEAMMB73_983793 [Zea mays]
Length = 654
Score = 301 bits (770), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 151/262 (57%), Positives = 195/262 (74%), Gaps = 3/262 (1%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D RAL+ +NF + G+PIRIM+S RDPS RKSG GN+FIKNLDKSIDNKA+YDTF AFG
Sbjct: 88 DAARALELLNFTPINGKPIRIMYSNRDPSSRKSGTGNIFIKNLDKSIDNKALYDTFCAFG 147
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCK+A D G S+GYGFV FE +E+A +I+K+NGML+N K VFVG F+ +++RE
Sbjct: 148 NILSCKIATDPSGESRGYGFVQFEKDESAQSAIDKLNGMLINDKKVFVGPFVRKQDREN- 206
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPE 254
+ K F+NVY+KN + D++LKEMF YGTITS VM ++DGKSR FGFV +E+ +
Sbjct: 207 VSSNIK-FSNVYVKNLSDTVTDDELKEMFGKYGTITSAVVMRDSDGKSRCFGFVNFENAD 265
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A +AVQ NGK + K LYVGRAQKK+ER ELK +FE E ++Q NLY+KNL+
Sbjct: 266 AAAQAVQELNGKIFNDKELYVGRAQKKSEREMELKEKFEKNVQEVAEKFQNTNLYLKNLE 325
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
++IDDE+LR+ F +G ITS K
Sbjct: 326 ENIDDEKLRELFAEYGNITSCK 347
Score = 147 bits (372), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 80/196 (40%), Positives = 127/196 (64%), Gaps = 11/196 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV++KNL ++ + + + F +G+I S V +D G S+ +GFV+FE +AA ++++++
Sbjct: 215 NVYVKNLSDTVTDDELKEMFGKYGTITSAVVMRDSDGKSRCFGFVNFENADAAAQAVQEL 274
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEK--------AKLF--TNVYIKNFGEDFNDEKLK 221
NG + N K ++VG+ + ERE EL EK A+ F TN+Y+KN E+ +DEKL+
Sbjct: 275 NGKIFNDKELYVGRAQKKSEREMELKEKFEKNVQEVAEKFQNTNLYLKNLEENIDDEKLR 334
Query: 222 EMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
E+F YG ITS +VM +++G SRG GFVA++S E A +A+ NGK V K LYV AQ+
Sbjct: 335 ELFAEYGNITSCKVMRDSNGVSRGSGFVAFKSAEDANRALTEMNGKMVGSKPLYVALAQR 394
Query: 281 KAERTQELKRRFEMLK 296
K +R +L+ +F ++
Sbjct: 395 KEDRKAKLQAQFSQMR 410
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 123/226 (54%), Gaps = 20/226 (8%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQD-EQGNSKGYGFVHFETEEAANKSIEK 170
++++ +L +S+ + ++D FS G ++S +V +D S GY +V++ + A +++E
Sbjct: 36 SLYVGDLHESVQDAQLFDVFSQVGGVVSVRVCRDINSRKSLGYAYVNYNNQGDAARALEL 95
Query: 171 VNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTI 230
+N +N K + + + R ++ G N++IKN + +++ L + F +G I
Sbjct: 96 LNFTPINGKPIRI-MYSNRDPSSRKSGT-----GNIFIKNLDKSIDNKALYDTFCAFGNI 149
Query: 231 TSYRVMNN-DGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELK 289
S ++ + G+SRG+GFV +E E A+ A+ NG ++ K ++VG +K +R + +
Sbjct: 150 LSCKIATDPSGESRGYGFVQFEKDESAQSAIDKLNGMLINDKKVFVGPFVRKQDR-ENVS 208
Query: 290 RRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSA 335
+ N+YVKNL D++ D+ L++ F +GTITSA
Sbjct: 209 SNIKF-----------SNVYVKNLSDTVTDDELKEMFGKYGTITSA 243
>gi|403216743|emb|CCK71239.1| hypothetical protein KNAG_0G01810 [Kazachstania naganishii CBS
8797]
Length = 596
Score = 301 bits (770), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 146/259 (56%), Positives = 192/259 (74%), Gaps = 1/259 (0%)
Query: 79 RALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSIL 138
+A++ +N+ +KG+ RIMWSQRDPSLRK G GN+FIKNL++ IDNKA++DTFS FG+IL
Sbjct: 103 QAIEKLNYTPIKGKLCRIMWSQRDPSLRKKGHGNIFIKNLNQDIDNKALFDTFSVFGNIL 162
Query: 139 SCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGE 198
S K+A DE G SKG+GFVHFE E AAN++I+ +NGMLLN + ++V + RKER+ +L E
Sbjct: 163 SSKIATDETGKSKGFGFVHFEEESAANEAIDALNGMLLNGQEIYVAPHLTRKERDSQLEE 222
Query: 199 KAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRV-MNNDGKSRGFGFVAYESPEFAE 257
FTNVY+KN + DE+ KE F GT+TS + DGK +GFGFV YE A
Sbjct: 223 TKAHFTNVYVKNIDLETTDEEFKEFFGKIGTVTSVALERGPDGKLKGFGFVNYEDHNDAV 282
Query: 258 KAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSI 317
KAV+ NG E + L+VGRAQKK ER Q LK+++E ++E++ +YQGVNL+VKNLDDSI
Sbjct: 283 KAVEELNGAEFKDQELFVGRAQKKYERIQSLKKQYESTRLEKMAKYQGVNLFVKNLDDSI 342
Query: 318 DDERLRKEFTPFGTITSAK 336
DDE+L++EF PFG ITS K
Sbjct: 343 DDEKLQEEFAPFGNITSVK 361
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 80/231 (34%), Positives = 127/231 (54%), Gaps = 17/231 (7%)
Query: 80 ALDTMNFDALKGRPI----RIMWSQRDPSLR--KSGVGNVFIKNLDKSIDNKAMYDTFSA 133
A+D +N L G+ I + +RD L K+ NV++KN+D ++ + F
Sbjct: 191 AIDALNGMLLNGQEIYVAPHLTRKERDSQLEETKAHFTNVYVKNIDLETTDEEFKEFFGK 250
Query: 134 FGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKERE 193
G++ S + + G KG+GFV++E A K++E++NG + +FVG+ + ER
Sbjct: 251 IGTVTSVALERGPDGKLKGFGFVNYEDHNDAVKAVEELNGAEFKDQELFVGRAQKKYERI 310
Query: 194 KELG--------EKAKLF--TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GKS 242
+ L EK + N+++KN + +DEKL+E F P+G ITS +VM + GKS
Sbjct: 311 QSLKKQYESTRLEKMAKYQGVNLFVKNLDDSIDDEKLQEEFAPFGNITSVKVMRTENGKS 370
Query: 243 RGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFE 293
+GFGFV + SPE A KA+ N + V GK LYV AQ+K R +L ++ +
Sbjct: 371 KGFGFVCFSSPEEATKAITEKNQQIVAGKPLYVAIAQRKDVRRSQLAQQIQ 421
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/225 (31%), Positives = 119/225 (52%), Gaps = 18/225 (8%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSIEK 170
++++ LD S+ +YD FS GS+ S +V +D S GY +V+F EA ++IEK
Sbjct: 48 SLYVGELDPSVSEALLYDLFSPIGSVASIRVCRDAITKTSLGYAYVNFSDHEAGKQAIEK 107
Query: 171 VNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTI 230
+N + K+ I +R+ L +K N++IKN +D +++ L + F +G I
Sbjct: 108 LNYTPIKGKLC----RIMWSQRDPSLRKKGH--GNIFIKNLNQDIDNKALFDTFSVFGNI 161
Query: 231 TSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELK 289
S ++ ++ GKS+GFGFV +E A +A+ A NG ++G+ +YV + ER +L+
Sbjct: 162 LSSKIATDETGKSKGFGFVHFEEESAANEAIDALNGMLLNGQEIYVAPHLTRKERDSQLE 221
Query: 290 RRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITS 334
+ N+YVKN+D DE ++ F GT+TS
Sbjct: 222 E----------TKAHFTNVYVKNIDLETTDEEFKEFFGKIGTVTS 256
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 65/135 (48%), Gaps = 18/135 (13%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQ 261
T++Y+ ++ L ++F P G++ S RV + S G+ +V + E ++A++
Sbjct: 47 TSLYVGELDPSVSEALLYDLFSPIGSVASIRVCRDAITKTSLGYAYVNFSDHEAGKQAIE 106
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDER 321
N + GK+ + +Q R L+++ N+++KNL+ ID++
Sbjct: 107 KLNYTPIKGKLCRIMWSQ----RDPSLRKKGHG------------NIFIKNLNQDIDNKA 150
Query: 322 LRKEFTPFGTITSAK 336
L F+ FG I S+K
Sbjct: 151 LFDTFSVFGNILSSK 165
>gi|430814566|emb|CCJ28224.1| unnamed protein product, partial [Pneumocystis jirovecii]
Length = 685
Score = 300 bits (768), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 145/264 (54%), Positives = 198/264 (75%), Gaps = 11/264 (4%)
Query: 74 MLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSA 133
+L ERALD +N+ +KG+P RIMWSQRDPSLRK+G GNVFIKNLD SIDNKA++DTF+A
Sbjct: 127 LLTGERALDELNYTLIKGKPCRIMWSQRDPSLRKTGTGNVFIKNLDASIDNKALHDTFTA 186
Query: 134 FGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKERE 193
FGSILSCKVA DE GNSKGYGFVH++T E+A +I K V+VG + +K+R+
Sbjct: 187 FGSILSCKVAVDELGNSKGYGFVHYKTSESAEAAI----------KHVYVGHHVSKKDRQ 236
Query: 194 KELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRV-MNNDGKSRGFGFVAYES 252
+ + FTNVY+KN + ++ + +E+F+ +G +TS + ++ +GKSRGFGFV YE+
Sbjct: 237 SKFDDMKLKFTNVYVKNIDPEISEAEFEELFKKFGNVTSLSLSVDENGKSRGFGFVNYEN 296
Query: 253 PEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKN 312
E A +AV+ + E + LYV RAQKK ER +EL++++E K+++LN+Y G+NL+VKN
Sbjct: 297 HEDAARAVEELHDTEYKDRKLYVCRAQKKHEREEELRKQYEQAKLDKLNKYNGINLFVKN 356
Query: 313 LDDSIDDERLRKEFTPFGTITSAK 336
LDD IDDERLR+EF+ +GTITSAK
Sbjct: 357 LDDDIDDERLRQEFSIYGTITSAK 380
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 73/192 (38%), Positives = 118/192 (61%), Gaps = 11/192 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV++KN+D I + F FG++ S ++ DE G S+G+GFV++E E A +++E++
Sbjct: 248 NVYVKNIDPEISEAEFEELFKKFGNVTSLSLSVDENGKSRGFGFVNYENHEDAARAVEEL 307
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELG---EKAKL-------FTNVYIKNFGEDFNDEKLK 221
+ + ++V + + ERE+EL E+AKL N+++KN +D +DE+L+
Sbjct: 308 HDTEYKDRKLYVCRAQKKHEREEELRKQYEQAKLDKLNKYNGINLFVKNLDDDIDDERLR 367
Query: 222 EMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
+ F YGTITS ++M +D GKS+GFGFV + SP+ A KA+ N + V GK LYV AQ+
Sbjct: 368 QEFSIYGTITSAKIMVDDNGKSKGFGFVCFSSPDEATKAITEMNQRMVSGKPLYVALAQR 427
Query: 281 KAERTQELKRRF 292
K R +L+ +
Sbjct: 428 KDVRRSQLESQI 439
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 80/148 (54%), Gaps = 22/148 (14%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQ----RDPSLRK-------------SGVGNVFIKNL 118
D RA++ ++ K R + + +Q R+ LRK +G+ N+F+KNL
Sbjct: 299 DAARAVEELHDTEYKDRKLYVCRAQKKHEREEELRKQYEQAKLDKLNKYNGI-NLFVKNL 357
Query: 119 DKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNS 178
D ID++ + FS +G+I S K+ D+ G SKG+GFV F + + A K+I ++N +++
Sbjct: 358 DDDIDDERLRQEFSIYGTITSAKIMVDDNGKSKGFGFVCFSSPDEATKAITEMNQRMVSG 417
Query: 179 KIVFVG----KFIPRKEREKELGEKAKL 202
K ++V K + R + E ++ + +L
Sbjct: 418 KPLYVALAQRKDVRRSQLESQINARNQL 445
Score = 42.7 bits (99), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 59/140 (42%), Gaps = 23/140 (16%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPE-----FA 256
++Y+ + L E+F G + S RV + +S G+ +V + +
Sbjct: 71 ASLYVGELDPSVTEAMLFELFNNIGAVASIRVCRDAVTRRSLGYAYVNFHNSSDVNLLTG 130
Query: 257 EKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDS 316
E+A+ N + GK + +Q+ L + N+++KNLD S
Sbjct: 131 ERALDELNYTLIKGKPCRIMWSQRDPS----------------LRKTGTGNVFIKNLDAS 174
Query: 317 IDDERLRKEFTPFGTITSAK 336
ID++ L FT FG+I S K
Sbjct: 175 IDNKALHDTFTAFGSILSCK 194
>gi|432118841|gb|ELK38215.1| Polyadenylate-binding protein 5 [Myotis davidii]
Length = 382
Score = 300 bits (767), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 151/266 (56%), Positives = 204/266 (76%), Gaps = 3/266 (1%)
Query: 73 YMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFS 132
+ D E AL+TMNFD + G+P R+MWSQ D LRKSGVGN+FIKNLDKSIDN+A++ FS
Sbjct: 68 FPADAEWALNTMNFDLINGKPFRLMWSQPDDRLRKSGVGNIFIKNLDKSIDNRALFYLFS 127
Query: 133 AFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKER 192
AFG+ILSCKV D+ G SKGY +VHF++ AAN++I +NG+ LN++ V+VG+F +ER
Sbjct: 128 AFGNILSCKVVCDDNG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEER 186
Query: 193 EKELGEKAK-LFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGKSRGFGFVAY 250
E+ + + FTNV++KNFG++ +DEKLKE+F YG S +V+ + GKS+GFGFV Y
Sbjct: 187 AAEVRTRDRATFTNVFVKNFGDEVDDEKLKEIFSEYGPTESVKVIRDASGKSKGFGFVRY 246
Query: 251 ESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYV 310
E+ E A+KAV +GK +DGK LYVGRAQKK ER EL+RRFE LK++ +R GV +Y+
Sbjct: 247 ETHEAAQKAVLDLHGKSIDGKALYVGRAQKKIERLAELRRRFERLKVKEKSRPPGVPVYI 306
Query: 311 KNLDDSIDDERLRKEFTPFGTITSAK 336
KNLD++IDDE+LR+EF+ FG+I+ AK
Sbjct: 307 KNLDETIDDEKLREEFSSFGSISRAK 332
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 69/182 (37%), Positives = 106/182 (58%), Gaps = 12/182 (6%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NVF+KN +D++ + + FS +G S KV +D G SKG+GFV +ET EAA K++ +
Sbjct: 200 NVFVKNFGDEVDDEKLKEIFSEYGPTESVKVIRDASGKSKGFGFVRYETHEAAQKAVLDL 259
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKLK 221
+G ++ K ++VG+ + ER EL + + VYIKN E +DEKL+
Sbjct: 260 HGKSIDGKALYVGRAQKKIERLAELRRRFERLKVKEKSRPPGVPVYIKNLDETIDDEKLR 319
Query: 222 EMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYV--GRAQ 279
E F +G+I+ +VM G+ +GFG V + S E A KAV NG+ V K L+V G+A+
Sbjct: 320 EEFSSFGSISRAKVMVEVGQGKGFGVVCFSSFEEATKAVGEMNGRMVGSKPLHVTLGQAR 379
Query: 280 KK 281
++
Sbjct: 380 RR 381
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 113/223 (50%), Gaps = 16/223 (7%)
Query: 115 IKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSK-GYGFVHFETEEAANKSIEKVNG 173
+ +LD + +Y F G + ++ +D + S GYG+V+F A ++ +N
Sbjct: 22 VGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPETRSPLGYGYVNFRFPADAEWALNTMNF 81
Query: 174 MLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSY 233
L+N K + P +R ++ G N++IKN + ++ L +F +G I S
Sbjct: 82 DLINGKPFRLMWSQP-DDRLRKSG-----VGNIFIKNLDKSIDNRALFYLFSAFGNILSC 135
Query: 234 RVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFE 293
+V+ +D S+G+ +V ++S A +A+ NG ++ + +YVGR + ER E++ R
Sbjct: 136 KVVCDDNGSKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEERAAEVRTR-- 193
Query: 294 MLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+R N++VKN D +DDE+L++ F+ +G S K
Sbjct: 194 -------DRATFTNVFVKNFGDEVDDEKLKEIFSEYGPTESVK 229
>gi|359386152|gb|AEV43365.1| poly A-binding protein 2 [Citrus sinensis]
Length = 652
Score = 298 bits (764), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 149/262 (56%), Positives = 197/262 (75%), Gaps = 3/262 (1%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
+ RALD +NF L G+PIRIM+S RDP++RKSG GN+FIKNLDKSIDNKA++DTFS FG
Sbjct: 93 EATRALDELNFTPLNGKPIRIMYSYRDPTIRKSGAGNIFIKNLDKSIDNKALHDTFSTFG 152
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCKVA D G S+GYGFV F+ EE+A +I+K+NGMLLN K VFVG F+ ++ERE
Sbjct: 153 NILSCKVATDSLGQSRGYGFVQFDNEESAKSAIDKLNGMLLNDKQVFVGPFLRKQEREST 212
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGKSRGFGFVAYESPE 254
+K + F NVY+KN E ++ LK++F +G ITS VM + DGKS+ FGFV ++ P+
Sbjct: 213 -ADKTR-FNNVYVKNLSETTTEDDLKKIFGEFGIITSTAVMRDADGKSKCFGFVNFDDPD 270
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A ++V+A NGK+ D K YVG+AQKK ER ELK +FE E ++++G+NLYVKNLD
Sbjct: 271 DAARSVEALNGKKFDDKEWYVGKAQKKYEREMELKGKFEQSLKETADKFEGLNLYVKNLD 330
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
DSI D++L++ F+ FGTITS K
Sbjct: 331 DSISDDKLKELFSEFGTITSCK 352
Score = 134 bits (337), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 82/208 (39%), Positives = 120/208 (57%), Gaps = 11/208 (5%)
Query: 100 QRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFE 159
+R+ + K+ NV++KNL ++ + F FG I S V +D G SK +GFV+F+
Sbjct: 208 ERESTADKTRFNNVYVKNLSETTTEDDLKKIFGEFGIITSTAVMRDADGKSKCFGFVNFD 267
Query: 160 TEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELG--------EKAKLF--TNVYIK 209
+ A +S+E +NG + K +VGK + ERE EL E A F N+Y+K
Sbjct: 268 DPDDAARSVEALNGKKFDDKEWYVGKAQKKYEREMELKGKFEQSLKETADKFEGLNLYVK 327
Query: 210 NFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGKSRGFGFVAYESPEFAEKAVQAWNGKEV 268
N + +D+KLKE+F +GTITS +VM + +G SRG GFVA+ + E A KA+ NGK V
Sbjct: 328 NLDDSISDDKLKELFSEFGTITSCKVMRDPNGISRGSGFVAFSTAEEASKALTEMNGKMV 387
Query: 269 DGKILYVGRAQKKAERTQELKRRFEMLK 296
K LYV AQ+K ER L+ +F ++
Sbjct: 388 VSKPLYVALAQRKEERRARLQAQFSQMR 415
Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 123/226 (54%), Gaps = 22/226 (9%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQD-EQGNSKGYGFVHFETEEAANKSIEK 170
++++ +LD S+++ +YD F+ G ++S +V +D S GYG+V++ A +++++
Sbjct: 41 SLYVGDLDLSVNDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNYNAAHEATRALDE 100
Query: 171 VNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTI 230
+N LN K + + + R ++ G N++IKN + +++ L + F +G I
Sbjct: 101 LNFTPLNGKPIRI-MYSYRDPTIRKSGA-----GNIFIKNLDKSIDNKALHDTFSTFGNI 154
Query: 231 TSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL- 288
S +V + G+SRG+GFV +++ E A+ A+ NG ++ K ++VG +K ER
Sbjct: 155 LSCKVATDSLGQSRGYGFVQFDNEESAKSAIDKLNGMLLNDKQVFVGPFLRKQERESTAD 214
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITS 334
K RF N+YVKNL ++ ++ L+K F FG ITS
Sbjct: 215 KTRFN-------------NVYVKNLSETTTEDDLKKIFGEFGIITS 247
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 64/135 (47%), Gaps = 18/135 (13%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQ 261
T++Y+ + ND +L ++F G + S RV + +S G+G+V Y + A +A+
Sbjct: 40 TSLYVGDLDLSVNDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNYNAAHEATRALD 99
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDER 321
N ++GK + + + + + + N+++KNLD SID++
Sbjct: 100 ELNFTPLNGKPIRIMYSYRDPT----------------IRKSGAGNIFIKNLDKSIDNKA 143
Query: 322 LRKEFTPFGTITSAK 336
L F+ FG I S K
Sbjct: 144 LHDTFSTFGNILSCK 158
>gi|226496737|ref|NP_001151785.1| LOC100285420 [Zea mays]
gi|195649671|gb|ACG44303.1| polyadenylate-binding protein 2 [Zea mays]
gi|414586484|tpg|DAA37055.1| TPA: polyadenylate-binding protein 2 [Zea mays]
Length = 660
Score = 298 bits (762), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 148/263 (56%), Positives = 195/263 (74%), Gaps = 3/263 (1%)
Query: 75 LDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAF 134
LD RAL+ +NF L +PIR+M+S RDPS R+SG N+FIKNLDK IDNK++++TFS+F
Sbjct: 92 LDAARALEVLNFAPLNNKPIRVMYSNRDPSSRRSGSANIFIKNLDKMIDNKSLHETFSSF 151
Query: 135 GSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREK 194
G+ILSCKVA DE G SKG+GFV +E EEAA +I+ +NGML+N K VFVG F+ ++ER+
Sbjct: 152 GTILSCKVAMDEGGQSKGFGFVQYEKEEAAQNAIKSLNGMLINDKPVFVGPFLRKQERDH 211
Query: 195 ELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESP 253
+K K F NV++KN E E L ++F YG ITS VM DGKSR FGF+ +E+P
Sbjct: 212 SF-DKTK-FNNVFVKNLSESTTKEDLLKIFGEYGNITSAVVMIGMDGKSRCFGFINFENP 269
Query: 254 EFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNL 313
+ A +AVQ NGK+++ K YVGRAQKK+ER ELKRRFE + + ++YQG+NLY+KNL
Sbjct: 270 DAASRAVQELNGKKINDKEWYVGRAQKKSEREMELKRRFEQILKDAADKYQGLNLYLKNL 329
Query: 314 DDSIDDERLRKEFTPFGTITSAK 336
DDSI D++LR+ F+ FG ITS K
Sbjct: 330 DDSIGDDQLRELFSNFGKITSCK 352
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 76/235 (32%), Positives = 133/235 (56%), Gaps = 15/235 (6%)
Query: 77 TERALDTMNFDALKGRPIRI----MWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFS 132
+ A+ ++N + +P+ + +RD S K+ NVF+KNL +S + + F
Sbjct: 181 AQNAIKSLNGMLINDKPVFVGPFLRKQERDHSFDKTKFNNVFVKNLSESTTKEDLLKIFG 240
Query: 133 AFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKER 192
+G+I S V G S+ +GF++FE +AA+++++++NG +N K +VG+ + ER
Sbjct: 241 EYGNITSAVVMIGMDGKSRCFGFINFENPDAASRAVQELNGKKINDKEWYVGRAQKKSER 300
Query: 193 EKELGEKAKLFT----------NVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGK 241
E EL + + N+Y+KN + D++L+E+F +G ITS +VM + +G
Sbjct: 301 EMELKRRFEQILKDAADKYQGLNLYLKNLDDSIGDDQLRELFSNFGKITSCKVMRDQNGL 360
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLK 296
S+G GFVA+ + E A +A+ NGK + GK LYV AQ+K +R L+ +F ++
Sbjct: 361 SKGSGFVAFSTREEASQALTEMNGKMISGKPLYVAFAQRKEDRKAMLQAQFSQMR 415
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/227 (32%), Positives = 122/227 (53%), Gaps = 22/227 (9%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGN-SKGYGFVHFETEEAANKSIEK 170
++++ +L+ S+ + +Y+ FS G ++S +V +D S GY +V+F A +++E
Sbjct: 41 SLYVGDLEGSVSDSQLYELFSQAGQVVSVRVCRDVTSRRSLGYAYVNFNNPLDAARALEV 100
Query: 171 VNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTI 230
+N LN+K + V + R + G N++IKN + +++ L E F +GTI
Sbjct: 101 LNFAPLNNKPIRV-MYSNRDPSSRRSGS-----ANIFIKNLDKMIDNKSLHETFSSFGTI 154
Query: 231 TSYRV-MNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL- 288
S +V M+ G+S+GFGFV YE E A+ A+++ NG ++ K ++VG +K ER
Sbjct: 155 LSCKVAMDEGGQSKGFGFVQYEKEEAAQNAIKSLNGMLINDKPVFVGPFLRKQERDHSFD 214
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSA 335
K +F N++VKNL +S E L K F +G ITSA
Sbjct: 215 KTKFN-------------NVFVKNLSESTTKEDLLKIFGEYGNITSA 248
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 64/135 (47%), Gaps = 18/135 (13%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQ 261
T++Y+ + +D +L E+F G + S RV + +S G+ +V + +P A +A++
Sbjct: 40 TSLYVGDLEGSVSDSQLYELFSQAGQVVSVRVCRDVTSRRSLGYAYVNFNNPLDAARALE 99
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDER 321
N ++ K + V + + R N+++KNLD ID++
Sbjct: 100 VLNFAPLNNKPIRVMYSNRDPSS----------------RRSGSANIFIKNLDKMIDNKS 143
Query: 322 LRKEFTPFGTITSAK 336
L + F+ FGTI S K
Sbjct: 144 LHETFSSFGTILSCK 158
>gi|356502327|ref|XP_003519971.1| PREDICTED: polyadenylate-binding protein 5-like [Glycine max]
Length = 616
Score = 298 bits (762), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 150/263 (57%), Positives = 194/263 (73%), Gaps = 4/263 (1%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D A++ +NF L G+ IR+M+S RDPS+RKSG NVFIKNLD SIDNK ++DTF+AFG
Sbjct: 58 DAANAMEHLNFTPLNGKSIRVMFSNRDPSIRKSGYANVFIKNLDISIDNKTLHDTFAAFG 117
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+LS KVA D G SKGYGFV F+ EE+A +I+++NGML+N K V+VG F+ R+ER +
Sbjct: 118 FVLSSKVAVDSIGQSKGYGFVQFDNEESAQNAIKELNGMLINDKKVYVGLFVNRQERAQV 177
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPE 254
G FTNVY+KNF E + DE L+++F YGTITS VM + DGKSR FGFV +ESP+
Sbjct: 178 DGSPK--FTNVYVKNFSETYTDEDLEQLFSTYGTITSAVVMKDTDGKSRCFGFVNFESPD 235
Query: 255 FAEKAVQAWNGKEV-DGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNL 313
A AV+ NG V D K+LYVGRAQ+KAER ELK RFE+ +I + +Y G NLYVKNL
Sbjct: 236 SAVAAVERLNGTTVNDDKVLYVGRAQRKAEREAELKARFELERIRKYEKYHGTNLYVKNL 295
Query: 314 DDSIDDERLRKEFTPFGTITSAK 336
D +I+D++L++ F+ FGTITS K
Sbjct: 296 DYNINDDKLKELFSEFGTITSCK 318
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 74/196 (37%), Positives = 123/196 (62%), Gaps = 12/196 (6%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV++KN ++ ++ + FS +G+I S V +D G S+ +GFV+FE+ ++A ++E++
Sbjct: 185 NVYVKNFSETYTDEDLEQLFSTYGTITSAVVMKDTDGKSRCFGFVNFESPDSAVAAVERL 244
Query: 172 NGMLLNS-KIVFVGKFIPRKEREKELGEKAKL----------FTNVYIKNFGEDFNDEKL 220
NG +N K+++VG+ + ERE EL + +L TN+Y+KN + ND+KL
Sbjct: 245 NGTTVNDDKVLYVGRAQRKAEREAELKARFELERIRKYEKYHGTNLYVKNLDYNINDDKL 304
Query: 221 KEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQ 279
KE+F +GTITS +VM +G+S+G+GFVA+ +P A +A+ NGK + + LYV AQ
Sbjct: 305 KELFSEFGTITSCKVMLEPNGRSKGYGFVAFSAPRNANRALHEMNGKMIGRRPLYVAVAQ 364
Query: 280 KKAERTQELKRRFEML 295
+K ER L+ +F +
Sbjct: 365 RKEERKALLEAQFSQM 380
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 128/230 (55%), Gaps = 19/230 (8%)
Query: 107 KSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANK 166
+SG ++++ +L++++D ++ F+ G I S +V +DE S GY +V+F + A
Sbjct: 2 QSGNASLYVGDLERNVDEAQLFQLFARVGPIFSIRVCRDETNRSLGYAYVNFVNPQDAAN 61
Query: 167 SIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEP 226
++E +N LN K + V F R ++ G + NV+IKN +++ L + F
Sbjct: 62 AMEHLNFTPLNGKSIRV-MFSNRDPSIRKSG-----YANVFIKNLDISIDNKTLHDTFAA 115
Query: 227 YGTITSYRV-MNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERT 285
+G + S +V +++ G+S+G+GFV +++ E A+ A++ NG ++ K +YVG + ER
Sbjct: 116 FGFVLSSKVAVDSIGQSKGYGFVQFDNEESAQNAIKELNGMLINDKKVYVGLFVNRQERA 175
Query: 286 QELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSA 335
Q ++ ++ N+YVKN ++ DE L + F+ +GTITSA
Sbjct: 176 Q----------VDGSPKF--TNVYVKNFSETYTDEDLEQLFSTYGTITSA 213
>gi|302142286|emb|CBI19489.3| unnamed protein product [Vitis vinifera]
Length = 621
Score = 298 bits (762), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 153/262 (58%), Positives = 197/262 (75%), Gaps = 3/262 (1%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D RALD +NF L G+PIRIM+S RDPS+RKSG N+FIKNLDKSIDNKA++DTFSAFG
Sbjct: 71 DAARALDLLNFTPLNGKPIRIMYSHRDPSIRKSGTANIFIKNLDKSIDNKALHDTFSAFG 130
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCK+A D G SKGYGFV F+ EE+A +I+K+NGML+N K V+VG+F+ ++ERE
Sbjct: 131 NILSCKIATDPSGQSKGYGFVQFDNEESAQNAIDKLNGMLINDKQVYVGQFLRKQERETA 190
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPE 254
L + F NVY+KN E +E LK +F +G ITS VM + DGKS+ FGFV +E+ +
Sbjct: 191 LNKTK--FNNVYVKNLSESTTEEDLKNIFGEFGIITSVVVMRDGDGKSKCFGFVNFENAD 248
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A +AV+A NGK+ D K YVG+AQKK ER ELK RFE E ++++QGVNLY+KNLD
Sbjct: 249 DAAEAVEALNGKKFDEKEWYVGKAQKKYERELELKGRFEQSMKEVVDKFQGVNLYIKNLD 308
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
DSI D++L++ F+ FGTITS K
Sbjct: 309 DSIGDDKLKELFSEFGTITSCK 330
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 83/208 (39%), Positives = 120/208 (57%), Gaps = 11/208 (5%)
Query: 100 QRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFE 159
+R+ +L K+ NV++KNL +S + + + F FG I S V +D G SK +GFV+FE
Sbjct: 186 ERETALNKTKFNNVYVKNLSESTTEEDLKNIFGEFGIITSVVVMRDGDGKSKCFGFVNFE 245
Query: 160 TEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELG--------EKAKLF--TNVYIK 209
+ A +++E +NG + K +VGK + ERE EL E F N+YIK
Sbjct: 246 NADDAAEAVEALNGKKFDEKEWYVGKAQKKYERELELKGRFEQSMKEVVDKFQGVNLYIK 305
Query: 210 NFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGKSRGFGFVAYESPEFAEKAVQAWNGKEV 268
N + D+KLKE+F +GTITS +VM + G SRG GFVA+ + E A +A+ NGK V
Sbjct: 306 NLDDSIGDDKLKELFSEFGTITSCKVMRDPSGISRGSGFVAFSTSEEASRALTEMNGKMV 365
Query: 269 DGKILYVGRAQKKAERTQELKRRFEMLK 296
K LYV AQ+K ER L+ +F ++
Sbjct: 366 VSKPLYVALAQRKEERRARLQAQFSQMR 393
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/232 (30%), Positives = 125/232 (53%), Gaps = 23/232 (9%)
Query: 108 SGVGN---VFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQD-EQGNSKGYGFVHFETEEA 163
+GV N +++ +LD +I + +YD F G +LS +V +D S GYG+V++ +
Sbjct: 12 NGVANTASLYVGDLDVNITDSQLYDLFIQAGQVLSVRVCRDLSTRRSLGYGYVNYSNPQD 71
Query: 164 ANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEM 223
A ++++ +N LN K + + + R ++ G N++IKN + +++ L +
Sbjct: 72 AARALDLLNFTPLNGKPIRI-MYSHRDPSIRKSGT-----ANIFIKNLDKSIDNKALHDT 125
Query: 224 FEPYGTITSYRVMNN-DGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKA 282
F +G I S ++ + G+S+G+GFV +++ E A+ A+ NG ++ K +YVG+ +K
Sbjct: 126 FSAFGNILSCKIATDPSGQSKGYGFVQFDNEESAQNAIDKLNGMLINDKQVYVGQFLRKQ 185
Query: 283 ERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITS 334
ER LN+ + N+YVKNL +S +E L+ F FG ITS
Sbjct: 186 ERETA------------LNKTKFNNVYVKNLSESTTEEDLKNIFGEFGIITS 225
>gi|334183839|ref|NP_177322.2| Polyadenylate-binding protein 5 [Arabidopsis thaliana]
gi|334183841|ref|NP_001185373.1| Polyadenylate-binding protein 5 [Arabidopsis thaliana]
gi|322510110|sp|Q05196.3|PABP5_ARATH RecName: Full=Polyadenylate-binding protein 5; Short=PABP-5;
Short=Poly(A)-binding protein 5
gi|332197109|gb|AEE35230.1| Polyadenylate-binding protein 5 [Arabidopsis thaliana]
gi|332197110|gb|AEE35231.1| Polyadenylate-binding protein 5 [Arabidopsis thaliana]
Length = 682
Score = 298 bits (762), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 144/262 (54%), Positives = 190/262 (72%), Gaps = 1/262 (0%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D RA++++N+ ++ RPIRIM S RDPS R SG GNVFIKNLD SIDNKA+Y+TFS+FG
Sbjct: 111 DASRAMESLNYAPIRDRPIRIMLSNRDPSTRLSGKGNVFIKNLDASIDNKALYETFSSFG 170
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCKVA D G SKGYGFV FE EE A +I+K+NGMLLN K VFVG F+ R++R +
Sbjct: 171 TILSCKVAMDVVGRSKGYGFVQFEKEETAQAAIDKLNGMLLNDKQVFVGHFVRRQDRARS 230
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPE 254
FTNVY+KN ++ D++LK+ F YG I+S VM + G SR FGFV + SPE
Sbjct: 231 ESGAVPSFTNVYVKNLPKEITDDELKKTFGKYGDISSAVVMKDQSGNSRSFGFVNFVSPE 290
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A AV+ NG + +LYVGRAQKK++R +EL+R+FE +I R + QG NLY+KNLD
Sbjct: 291 AAAVAVEKMNGISLGEDVLYVGRAQKKSDREEELRRKFEQERISRFEKLQGSNLYLKNLD 350
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
DS++DE+L++ F+ +G +TS K
Sbjct: 351 DSVNDEKLKEMFSEYGNVTSCK 372
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 85/196 (43%), Positives = 123/196 (62%), Gaps = 11/196 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV++KNL K I + + TF +G I S V +D+ GNS+ +GFV+F + EAA ++EK+
Sbjct: 240 NVYVKNLPKEITDDELKKTFGKYGDISSAVVMKDQSGNSRSFGFVNFVSPEAAAVAVEKM 299
Query: 172 NGMLLNSKIVFVGKFIPRKEREKEL-----GEKAKLF-----TNVYIKNFGEDFNDEKLK 221
NG+ L +++VG+ + +RE+EL E+ F +N+Y+KN + NDEKLK
Sbjct: 300 NGISLGEDVLYVGRAQKKSDREEELRRKFEQERISRFEKLQGSNLYLKNLDDSVNDEKLK 359
Query: 222 EMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
EMF YG +TS +VM N+ G SRGFGFVAY +PE A A++ NGK + K LYV AQ+
Sbjct: 360 EMFSEYGNVTSCKVMMNSQGLSRGFGFVAYSNPEEALLAMKEMNGKMIGRKPLYVALAQR 419
Query: 281 KAERTQELKRRFEMLK 296
K ER L+ F ++
Sbjct: 420 KEERQAHLQSLFTQIR 435
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 118/225 (52%), Gaps = 17/225 (7%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
++++ +LD S++ + D F+ + + +V +D S GY +V+F E A++++E +
Sbjct: 60 SLYVGDLDPSVNESHLLDLFNQVAPVHNLRVCRDLTHRSLGYAYVNFANPEDASRAMESL 119
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTIT 231
N + + + + + ++ L K NV+IKN +++ L E F +GTI
Sbjct: 120 NYAPIRDRPIRI--MLSNRDPSTRLSGKG----NVFIKNLDASIDNKALYETFSSFGTIL 173
Query: 232 SYRV-MNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKR 290
S +V M+ G+S+G+GFV +E E A+ A+ NG ++ K ++VG ++ +R
Sbjct: 174 SCKVAMDVVGRSKGYGFVQFEKEETAQAAIDKLNGMLLNDKQVFVGHFVRRQDRA----- 228
Query: 291 RFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSA 335
R E + N+YVKNL I D+ L+K F +G I+SA
Sbjct: 229 RSESGAVPSF-----TNVYVKNLPKEITDDELKKTFGKYGDISSA 268
>gi|319411853|emb|CBQ73896.1| probable PAB1-mRNA polyadenylate-binding protein [Sporisorium
reilianum SRZ2]
Length = 650
Score = 298 bits (762), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 147/262 (56%), Positives = 195/262 (74%), Gaps = 2/262 (0%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D ERA++ +N+ ++ RP RIMWSQRDP+LR++G GN+FIKNLD IDNKA++DTF+AFG
Sbjct: 100 DGERAMEQLNYSLIRNRPCRIMWSQRDPALRRTGQGNIFIKNLDAGIDNKALHDTFAAFG 159
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCKVA ++ G S GYGFVH+ET EAA +I+ VNGMLLN K V+VG IPRKER+ +
Sbjct: 160 NILSCKVATNDTG-SLGYGFVHYETAEAAEAAIKHVNGMLLNDKKVYVGHHIPRKERQAK 218
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPE 254
+ E FTNVY KN D DE+ +++F YG ITS + ++DGKS+GFGFV +E
Sbjct: 219 IEESRANFTNVYAKNVDPDVTDEEFEKLFTRYGKITSCVLQRDDDGKSKGFGFVNFEDHN 278
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A+ AV + + G+ L+V RAQKK+ER +EL+R +E K E+L ++QGVNLY+KN+
Sbjct: 279 EAQTAVDELHDSDFKGQKLFVARAQKKSEREEELRRSYEAAKNEKLAKFQGVNLYLKNIP 338
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
+S DDERLR+EF PFG ITS K
Sbjct: 339 ESYDDERLREEFAPFGAITSCK 360
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 75/189 (39%), Positives = 113/189 (59%), Gaps = 11/189 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV+ KN+D + ++ F+ +G I SC + +D+ G SKG+GFV+FE A +++++
Sbjct: 228 NVYAKNVDPDVTDEEFEKLFTRYGKITSCVLQRDDDGKSKGFGFVNFEDHNEAQTAVDEL 287
Query: 172 NGMLLNSKIVFVGKFIPRKEREKEL--------GEKAKLF--TNVYIKNFGEDFNDEKLK 221
+ + +FV + + ERE+EL EK F N+Y+KN E ++DE+L+
Sbjct: 288 HDSDFKGQKLFVARAQKKSEREEELRRSYEAAKNEKLAKFQGVNLYLKNIPESYDDERLR 347
Query: 222 EMFEPYGTITSYRVMN-NDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
E F P+G ITS ++M G SRGFGFV Y PE A KAV NGK +D + LYV AQ+
Sbjct: 348 EEFAPFGAITSCKIMRAPSGVSRGFGFVCYSVPEEANKAVSEMNGKMLDNRPLYVALAQR 407
Query: 281 KAERTQELK 289
K +R Q+L+
Sbjct: 408 KDDRRQQLE 416
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 114/225 (50%), Gaps = 17/225 (7%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSIEK 170
++++ LD S+ +++ F+ G + S +V +D S GY +V+F +++E+
Sbjct: 48 SLYVGELDPSVTEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNFLNAADGERAMEQ 107
Query: 171 VNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTI 230
+N L+ ++ I +R+ L + N++IKN +++ L + F +G I
Sbjct: 108 LNYSLIRNRPC----RIMWSQRDPALRRTGQ--GNIFIKNLDAGIDNKALHDTFAAFGNI 161
Query: 231 TSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKR 290
S +V ND S G+GFV YE+ E AE A++ NG ++ K +YVG + R
Sbjct: 162 LSCKVATNDTGSLGYGFVHYETAEAAEAAIKHVNGMLLNDKKVYVG---------HHIPR 212
Query: 291 RFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSA 335
+ KIE +R N+Y KN+D + DE K FT +G ITS
Sbjct: 213 KERQAKIEE-SRANFTNVYAKNVDPDVTDEEFEKLFTRYGKITSC 256
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 80/138 (57%), Gaps = 18/138 (13%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQ----RDPSLRKS-------------GVGNVFIKNL 118
+ + A+D ++ KG+ + + +Q R+ LR+S GV N+++KN+
Sbjct: 279 EAQTAVDELHDSDFKGQKLFVARAQKKSEREEELRRSYEAAKNEKLAKFQGV-NLYLKNI 337
Query: 119 DKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNS 178
+S D++ + + F+ FG+I SCK+ + G S+G+GFV + E ANK++ ++NG +L++
Sbjct: 338 PESYDDERLREEFAPFGAITSCKIMRAPSGVSRGFGFVCYSVPEEANKAVSEMNGKMLDN 397
Query: 179 KIVFVGKFIPRKEREKEL 196
+ ++V + +R ++L
Sbjct: 398 RPLYVALAQRKDDRRQQL 415
Score = 40.8 bits (94), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 57/135 (42%), Gaps = 18/135 (13%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQ 261
T++Y+ + L E+F G + S RV + +S G+ +V + + E+A++
Sbjct: 47 TSLYVGELDPSVTEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNFLNAADGERAME 106
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDER 321
N + + + +Q+ L R N+++KNLD ID++
Sbjct: 107 QLNYSLIRNRPCRIMWSQRDPA----------------LRRTGQGNIFIKNLDAGIDNKA 150
Query: 322 LRKEFTPFGTITSAK 336
L F FG I S K
Sbjct: 151 LHDTFAAFGNILSCK 165
>gi|302808075|ref|XP_002985732.1| hypothetical protein SELMODRAFT_122762 [Selaginella moellendorffii]
gi|300146641|gb|EFJ13310.1| hypothetical protein SELMODRAFT_122762 [Selaginella moellendorffii]
Length = 635
Score = 298 bits (762), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 151/262 (57%), Positives = 197/262 (75%), Gaps = 3/262 (1%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D RAL+ +NF + G+PIRIM+S RDPS+RKSG+ N+FIKNLDKSIDNKA+YDTF+ FG
Sbjct: 90 DASRALEMLNFSLVNGKPIRIMFSHRDPSIRKSGMANIFIKNLDKSIDNKALYDTFAQFG 149
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCKVA D G S+GYGFV FE E+AA +I++VNGMLL K VFVG F+ R+ER+
Sbjct: 150 NILSCKVAVDSSGQSRGYGFVQFEQEDAAQSAIKQVNGMLLIEKQVFVGPFVRRQERDLT 209
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGKSRGFGFVAYESPE 254
G AK F NVY+KN G+ D+ LK +F +G I+S VM + +GKS+ FGFV +E+ +
Sbjct: 210 -GGIAK-FNNVYVKNLGDATTDDDLKRVFGEFGPISSAVVMRDPEGKSKCFGFVNFENAD 267
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A AV+ NGK++D K YVGRAQKK+ER EL+ R++ + ER ++YQGVNLY+KNLD
Sbjct: 268 DAALAVEELNGKKMDDKEWYVGRAQKKSEREAELRARYDQERKERSDKYQGVNLYLKNLD 327
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
D+IDD++LR+ F FGTI S K
Sbjct: 328 DTIDDDKLRELFHGFGTIISCK 349
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 72/192 (37%), Positives = 112/192 (58%), Gaps = 16/192 (8%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV++KNL + + + F FG I S V +D +G SK +GFV+FE + A ++E++
Sbjct: 217 NVYVKNLGDATTDDDLKRVFGEFGPISSAVVMRDPEGKSKCFGFVNFENADDAALAVEEL 276
Query: 172 NGMLLNSKIVFVGKFIPRKEREKEL--------GEKAKLF--TNVYIKNFGEDFNDEKLK 221
NG ++ K +VG+ + ERE EL E++ + N+Y+KN + +D+KL+
Sbjct: 277 NGKKMDDKEWYVGRAQKKSEREAELRARYDQERKERSDKYQGVNLYLKNLDDTIDDDKLR 336
Query: 222 EMFEPYGTITSYRVMNN-DGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
E+F +GTI S +VM + G S+G GFVA+ + E A +A+ NG+ V K +YV AQK
Sbjct: 337 ELFHGFGTIISCKVMRDPQGHSKGSGFVAFSTTEEANRAMTEMNGRMVANKPIYVALAQK 396
Query: 281 KAERTQELKRRF 292
+ ER RRF
Sbjct: 397 RDER-----RRF 403
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 124/226 (54%), Gaps = 20/226 (8%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSIEK 170
++++ +LD ++ +YD F+ +LS +V +D S GY +V++ T + A++++E
Sbjct: 38 SLYVGDLDPNVTEGQLYDVFNQVAPVLSIRVCRDLISKRSLGYAYVNYNTGQDASRALEM 97
Query: 171 VNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTI 230
+N L+N K + + F R ++ G N++IKN + +++ L + F +G I
Sbjct: 98 LNFSLVNGKPIRI-MFSHRDPSIRKSG-----MANIFIKNLDKSIDNKALYDTFAQFGNI 151
Query: 231 TSYRV-MNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELK 289
S +V +++ G+SRG+GFV +E + A+ A++ NG + K ++VG ++ ER
Sbjct: 152 LSCKVAVDSSGQSRGYGFVQFEQEDAAQSAIKQVNGMLLIEKQVFVGPFVRRQERDL--- 208
Query: 290 RRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSA 335
I + N N+YVKNL D+ D+ L++ F FG I+SA
Sbjct: 209 ----TGGIAKFN-----NVYVKNLGDATTDDDLKRVFGEFGPISSA 245
>gi|303272375|ref|XP_003055549.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226463523|gb|EEH60801.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 606
Score = 298 bits (762), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 149/263 (56%), Positives = 191/263 (72%), Gaps = 6/263 (2%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D RA+D +NF + G+PIRIM+SQRDP+LRKSGVGN+FIKNLDK IDNKA+YDTF+ FG
Sbjct: 85 DAARAIDALNFQVVNGKPIRIMYSQRDPALRKSGVGNIFIKNLDKEIDNKALYDTFAQFG 144
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+I+S KVA D QG SKGYGFV F+TEE A +IEKVNGMLLN K V+VG F R ER
Sbjct: 145 NIVSAKVATDLQGQSKGYGFVQFDTEEGAQSAIEKVNGMLLNDKQVYVGPFQKRNER--- 201
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGKSRGFGFVAYESPE 254
G F NVY+KN E +EKL+E+FE +G +TS VM + +GKS+GFGFV YE E
Sbjct: 202 -GGGPTTFNNVYVKNLHESVTEEKLREVFEKFGALTSVVVMKDAEGKSKGFGFVCYEDAE 260
Query: 255 FAEKAVQAWNG-KEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNL 313
A K+V+ +G +++ K V RAQKK+ER ELK +F+ + ER+ + G NLY+KNL
Sbjct: 261 AAGKSVEELDGYDKIEDKAWVVCRAQKKSEREAELKAKFDAERRERMEKMAGANLYIKNL 320
Query: 314 DDSIDDERLRKEFTPFGTITSAK 336
+D++DD +LR+ F FGTITS +
Sbjct: 321 EDTVDDAKLRELFAEFGTITSCR 343
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 79/200 (39%), Positives = 115/200 (57%), Gaps = 16/200 (8%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV++KNL +S+ + + + F FG++ S V +D +G SKG+GFV +E EAA KS+E++
Sbjct: 210 NVYVKNLHESVTEEKLREVFEKFGALTSVVVMKDAEGKSKGFGFVCYEDAEAAGKSVEEL 269
Query: 172 NGM-LLNSKIVFVGKFIPRKEREKELGEKAKL------------FTNVYIKNFGEDFNDE 218
+G + K V + + ERE EL KAK N+YIKN + +D
Sbjct: 270 DGYDKIEDKAWVVCRAQKKSEREAEL--KAKFDAERRERMEKMAGANLYIKNLEDTVDDA 327
Query: 219 KLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGR 277
KL+E+F +GTITS RVM + G SRG FVA+ S + A +AV NGK K LYV
Sbjct: 328 KLRELFAEFGTITSCRVMRDTAGASRGSAFVAFSSADEATRAVTEMNGKMAGQKPLYVAL 387
Query: 278 AQKKAERTQELKRRFEMLKI 297
AQ+K +R L+ +F ++
Sbjct: 388 AQRKEDRRLRLQAQFAQRQV 407
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 122/225 (54%), Gaps = 22/225 (9%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSIEK 170
+++ +LD S +Y+ FS G ++S +V +D S GY +V+F+ A ++I+
Sbjct: 33 SLYCGDLDPSCTEAQLYELFSTIGPVVSIRVCRDLITRRSLGYAYVNFQQGNDAARAIDA 92
Query: 171 VNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTI 230
+N ++N K + I +R+ L + N++IKN ++ +++ L + F +G I
Sbjct: 93 LNFQVVNGKPI----RIMYSQRDPALRKSG--VGNIFIKNLDKEIDNKALYDTFAQFGNI 146
Query: 231 TSYRVMNN-DGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELK 289
S +V + G+S+G+GFV +++ E A+ A++ NG ++ K +YVG QK+ ER
Sbjct: 147 VSAKVATDLQGQSKGYGFVQFDTEEGAQSAIEKVNGMLLNDKQVYVGPFQKRNERGG--- 203
Query: 290 RRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITS 334
N N+YVKNL +S+ +E+LR+ F FG +TS
Sbjct: 204 ------GPTTFN-----NVYVKNLHESVTEEKLREVFEKFGALTS 237
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 56/93 (60%), Gaps = 1/93 (1%)
Query: 99 SQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHF 158
++R + K N++IKNL+ ++D+ + + F+ FG+I SC+V +D G S+G FV F
Sbjct: 301 AERRERMEKMAGANLYIKNLEDTVDDAKLRELFAEFGTITSCRVMRDTAGASRGSAFVAF 360
Query: 159 ETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKE 191
+ + A +++ ++NG + K ++V RKE
Sbjct: 361 SSADEATRAVTEMNGKMAGQKPLYVA-LAQRKE 392
>gi|115475838|ref|NP_001061515.1| Os08g0314800 [Oryza sativa Japonica Group]
gi|35215045|dbj|BAC92404.1| putative polyadenylate-binding protein [Oryza sativa Japonica
Group]
gi|35215184|dbj|BAC92537.1| putative polyadenylate-binding protein [Oryza sativa Japonica
Group]
gi|113623484|dbj|BAF23429.1| Os08g0314800 [Oryza sativa Japonica Group]
gi|215694402|dbj|BAG89395.1| unnamed protein product [Oryza sativa Japonica Group]
gi|258644698|dbj|BAI39945.1| putative poly(A)-binding protein [Oryza sativa Indica Group]
Length = 660
Score = 297 bits (761), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 155/263 (58%), Positives = 189/263 (71%), Gaps = 4/263 (1%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D RAL+ +NF + G+PIRIM+S RDPS RKSG N+FIKNLDKSIDNKA+YDTFS FG
Sbjct: 92 DAARALEMLNFTPINGKPIRIMYSNRDPSSRKSGAANIFIKNLDKSIDNKALYDTFSVFG 151
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCKVA + G SKGYGFV FE EEAA +I K+NGMLLN K V+VG F+ ++ERE
Sbjct: 152 NILSCKVATEMSGESKGYGFVQFELEEAAQNAISKLNGMLLNDKKVYVGPFVRKQERENV 211
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPE 254
G F NVY+KN E ++ LKE+F +G ITS VM DGKSR FGFV +E+P+
Sbjct: 212 SGNPK--FNNVYVKNLSESTTEDNLKEIFGKFGPITSVVVMREGDGKSRCFGFVNFENPD 269
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A +AV+ NGK+ D K YV RAQKK+ER ELK +FE E ++ QG NLY+KNLD
Sbjct: 270 DAARAVEDLNGKKFDDKEWYVCRAQKKSEREMELKEKFEKNIKEAADKNQGTNLYLKNLD 329
Query: 315 DSI-DDERLRKEFTPFGTITSAK 336
DSI DDE+L++ F FGTITS K
Sbjct: 330 DSIDDDEKLKEIFADFGTITSCK 352
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 77/197 (39%), Positives = 116/197 (58%), Gaps = 12/197 (6%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV++KNL +S + + F FG I S V ++ G S+ +GFV+FE + A +++E +
Sbjct: 219 NVYVKNLSESTTEDNLKEIFGKFGPITSVVVMREGDGKSRCFGFVNFENPDDAARAVEDL 278
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEK----------AKLFTNVYIKNFGEDFND-EKL 220
NG + K +V + + ERE EL EK TN+Y+KN + +D EKL
Sbjct: 279 NGKKFDDKEWYVCRAQKKSEREMELKEKFEKNIKEAADKNQGTNLYLKNLDDSIDDDEKL 338
Query: 221 KEMFEPYGTITSYRVMNN-DGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQ 279
KE+F +GTITS +VM + +G S+G GFVA++S E A +A+ A NGK + K LYV AQ
Sbjct: 339 KEIFADFGTITSCKVMRDLNGVSKGSGFVAFKSAEDASRALVAMNGKMIGSKPLYVALAQ 398
Query: 280 KKAERTQELKRRFEMLK 296
+K ER L+ +F ++
Sbjct: 399 RKEERRARLQAQFSQMR 415
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 120/225 (53%), Gaps = 20/225 (8%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGN-SKGYGFVHFETEEAANKSIEK 170
++++ +LD S+ + ++D FS GS++S +V +D S GY +V+F + A +++E
Sbjct: 40 SLYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRLSLGYAYVNFSSPADAARALEM 99
Query: 171 VNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTI 230
+N +N K + + + R ++ G N++IKN + +++ L + F +G I
Sbjct: 100 LNFTPINGKPIRI-MYSNRDPSSRKSGA-----ANIFIKNLDKSIDNKALYDTFSVFGNI 153
Query: 231 TSYRVMNN-DGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELK 289
S +V G+S+G+GFV +E E A+ A+ NG ++ K +YVG +K ER
Sbjct: 154 LSCKVATEMSGESKGYGFVQFELEEAAQNAISKLNGMLLNDKKVYVGPFVRKQERE---- 209
Query: 290 RRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITS 334
+ + N N+YVKNL +S ++ L++ F FG ITS
Sbjct: 210 ---NVSGNPKFN-----NVYVKNLSESTTEDNLKEIFGKFGPITS 246
>gi|13560783|gb|AAK30205.1|AF349964_1 poly(A)-binding protein [Daucus carota]
Length = 658
Score = 297 bits (761), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 145/262 (55%), Positives = 199/262 (75%), Gaps = 3/262 (1%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D RA+D +NF L + IR+ S+RDP+ RKSG GN+FIKNLDKSID KA+++TFS+FG
Sbjct: 93 DATRAIDVLNFTPLNNKTIRVSVSRRDPTDRKSGAGNIFIKNLDKSIDIKALHETFSSFG 152
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+I+SCK+A D G SKGYGFV +++EEAA +I+K+NGML+N K V+VG F+ +++R+ E
Sbjct: 153 TIISCKIATDASGQSKGYGFVQYDSEEAAQTAIDKLNGMLMNDKQVYVGVFLRKQDRDSE 212
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGKSRGFGFVAYESPE 254
+ + F N+Y+KN + +++ L++ F YGTITS VM + DGKS+ FGFV +E+PE
Sbjct: 213 MSKTK--FNNIYVKNLSDSTSEDDLRKTFGEYGTITSVVVMRDADGKSKCFGFVNFENPE 270
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A KAV A NGK+ D K YVG+AQKK+ER ELK RFE E++++YQGVNLYVKNLD
Sbjct: 271 DAAKAVDALNGKKFDDKEWYVGKAQKKSEREVELKSRFEQTVKEQVDKYQGVNLYVKNLD 330
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
D+IDDE+L++ F+ +GTITS K
Sbjct: 331 DTIDDEKLKELFSEYGTITSCK 352
Score = 144 bits (363), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 82/207 (39%), Positives = 119/207 (57%), Gaps = 11/207 (5%)
Query: 101 RDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFET 160
RD + K+ N+++KNL S + TF +G+I S V +D G SK +GFV+FE
Sbjct: 209 RDSEMSKTKFNNIYVKNLSDSTSEDDLRKTFGEYGTITSVVVMRDADGKSKCFGFVNFEN 268
Query: 161 EEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFT----------NVYIKN 210
E A K+++ +NG + K +VGK + ERE EL + + N+Y+KN
Sbjct: 269 PEDAAKAVDALNGKKFDDKEWYVGKAQKKSEREVELKSRFEQTVKEQVDKYQGVNLYVKN 328
Query: 211 FGEDFNDEKLKEMFEPYGTITSYRVMNN-DGKSRGFGFVAYESPEFAEKAVQAWNGKEVD 269
+ +DEKLKE+F YGTITS +VM + G SRG GFVA+ +PE A +A+ NGK +
Sbjct: 329 LDDTIDDEKLKELFSEYGTITSCKVMRDPSGISRGSGFVAFSTPEEASRALGEMNGKMIV 388
Query: 270 GKILYVGRAQKKAERTQELKRRFEMLK 296
K LYV AQ+K ER L+ +F ++
Sbjct: 389 SKPLYVALAQRKEERRARLQAQFSQMR 415
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 74/226 (32%), Positives = 130/226 (57%), Gaps = 22/226 (9%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQD-EQGNSKGYGFVHFETEEAANKSIEK 170
++++ +LD+S+ + +YD F+ G ++S +V +D G S GYG+V++ ++ A ++I+
Sbjct: 41 SLYVGDLDQSVTDSQLYDLFNQVGQVVSVRVCRDLSTGRSLGYGYVNYSNQQDATRAIDV 100
Query: 171 VNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTI 230
+N LN+K + V + R++ ++ N++IKN + + + L E F +GTI
Sbjct: 101 LNFTPLNNKTIRVS--VSRRDPT----DRKSGAGNIFIKNLDKSIDIKALHETFSSFGTI 154
Query: 231 TSYRVMNN-DGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL- 288
S ++ + G+S+G+GFV Y+S E A+ A+ NG ++ K +YVG +K +R E+
Sbjct: 155 ISCKIATDASGQSKGYGFVQYDSEEAAQTAIDKLNGMLMNDKQVYVGVFLRKQDRDSEMS 214
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITS 334
K +F N+YVKNL DS ++ LRK F +GTITS
Sbjct: 215 KTKFN-------------NIYVKNLSDSTSEDDLRKTFGEYGTITS 247
>gi|297832034|ref|XP_002883899.1| hypothetical protein ARALYDRAFT_899764 [Arabidopsis lyrata subsp.
lyrata]
gi|297329739|gb|EFH60158.1| hypothetical protein ARALYDRAFT_899764 [Arabidopsis lyrata subsp.
lyrata]
Length = 655
Score = 297 bits (761), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 145/262 (55%), Positives = 196/262 (74%), Gaps = 3/262 (1%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D RA+ +N+ L G+P+R+M+S RDPS+R+SG GN+FIKNLDKSID+KA++DTFS FG
Sbjct: 93 DAARAIQELNYIPLNGKPVRVMYSHRDPSVRRSGAGNIFIKNLDKSIDHKALHDTFSVFG 152
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+I+SCKVA D G SKGYGFV +ETEE+A K++ ++NGMLLN K V+VG F+ R+ER+
Sbjct: 153 NIISCKVAVDSSGQSKGYGFVQYETEESAQKAMGQLNGMLLNDKQVYVGPFLRRQERD-S 211
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPE 254
G K +FTNVY+KN E D+ LK +F +G ITS VM + +GK +GFGFV +E+ +
Sbjct: 212 TGNKT-IFTNVYVKNLAESTTDDDLKNIFGEFGKITSAVVMKDGEGKPKGFGFVNFENAD 270
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A KAV++ NGK D K +VGRAQKK+ER ELK ++E E +++Q NLYVKNLD
Sbjct: 271 DAAKAVESLNGKTFDDKEWFVGRAQKKSEREMELKVQYEQSLKEAADKFQSSNLYVKNLD 330
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
DS+ DE+L++ FTP+GT+TS K
Sbjct: 331 DSVSDEKLKELFTPYGTVTSCK 352
Score = 150 bits (380), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 85/208 (40%), Positives = 127/208 (61%), Gaps = 11/208 (5%)
Query: 100 QRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFE 159
+RD + K+ NV++KNL +S + + + F FG I S V +D +G KG+GFV+FE
Sbjct: 208 ERDSTGNKTIFTNVYVKNLAESTTDDDLKNIFGEFGKITSAVVMKDGEGKPKGFGFVNFE 267
Query: 160 TEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELG--------EKAKLF--TNVYIK 209
+ A K++E +NG + K FVG+ + ERE EL E A F +N+Y+K
Sbjct: 268 NADDAAKAVESLNGKTFDDKEWFVGRAQKKSEREMELKVQYEQSLKEAADKFQSSNLYVK 327
Query: 210 NFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGKSRGFGFVAYESPEFAEKAVQAWNGKEV 268
N + +DEKLKE+F PYGT+TS +VM + +G SRG GFVA+ +PE A KA+ +GK +
Sbjct: 328 NLDDSVSDEKLKELFTPYGTVTSCKVMRDPNGMSRGSGFVAFSTPEEATKAMSEMSGKMI 387
Query: 269 DGKILYVGRAQKKAERTQELKRRFEMLK 296
+ K LYV AQ+K +R L+ +F ++
Sbjct: 388 ENKPLYVAVAQRKEDRRARLQAQFSQMR 415
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 126/229 (55%), Gaps = 20/229 (8%)
Query: 109 GVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQD-EQGNSKGYGFVHFETEEAANKS 167
G ++++ +LD ++ + ++D FS G ++S +V +D S GYG+V+F + + A ++
Sbjct: 38 GTTSLYVGDLDPNVTDSQLFDAFSQMGQVVSVRVCRDLATRRSLGYGYVNFTSPQDAARA 97
Query: 168 IEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPY 227
I+++N + LN K V V + R + G N++IKN + + + L + F +
Sbjct: 98 IQELNYIPLNGKPVRV-MYSHRDPSVRRSGA-----GNIFIKNLDKSIDHKALHDTFSVF 151
Query: 228 GTITSYRV-MNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQ 286
G I S +V +++ G+S+G+GFV YE+ E A+KA+ NG ++ K +YVG ++ ER
Sbjct: 152 GNIISCKVAVDSSGQSKGYGFVQYETEESAQKAMGQLNGMLLNDKQVYVGPFLRRQERD- 210
Query: 287 ELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSA 335
N+ N+YVKNL +S D+ L+ F FG ITSA
Sbjct: 211 -----------STGNKTIFTNVYVKNLAESTTDDDLKNIFGEFGKITSA 248
>gi|7239504|gb|AAF43230.1|AC012654_14 Identical to the polyadenylate-binding protein 5 (PAB5) from
Arabidopsis thaliana gb|M97657 [Arabidopsis thaliana]
Length = 668
Score = 297 bits (761), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 144/262 (54%), Positives = 190/262 (72%), Gaps = 1/262 (0%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D RA++++N+ ++ RPIRIM S RDPS R SG GNVFIKNLD SIDNKA+Y+TFS+FG
Sbjct: 97 DASRAMESLNYAPIRDRPIRIMLSNRDPSTRLSGKGNVFIKNLDASIDNKALYETFSSFG 156
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCKVA D G SKGYGFV FE EE A +I+K+NGMLLN K VFVG F+ R++R +
Sbjct: 157 TILSCKVAMDVVGRSKGYGFVQFEKEETAQAAIDKLNGMLLNDKQVFVGHFVRRQDRARS 216
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPE 254
FTNVY+KN ++ D++LK+ F YG I+S VM + G SR FGFV + SPE
Sbjct: 217 ESGAVPSFTNVYVKNLPKEITDDELKKTFGKYGDISSAVVMKDQSGNSRSFGFVNFVSPE 276
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A AV+ NG + +LYVGRAQKK++R +EL+R+FE +I R + QG NLY+KNLD
Sbjct: 277 AAAVAVEKMNGISLGEDVLYVGRAQKKSDREEELRRKFEQERISRFEKLQGSNLYLKNLD 336
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
DS++DE+L++ F+ +G +TS K
Sbjct: 337 DSVNDEKLKEMFSEYGNVTSCK 358
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 85/196 (43%), Positives = 123/196 (62%), Gaps = 11/196 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV++KNL K I + + TF +G I S V +D+ GNS+ +GFV+F + EAA ++EK+
Sbjct: 226 NVYVKNLPKEITDDELKKTFGKYGDISSAVVMKDQSGNSRSFGFVNFVSPEAAAVAVEKM 285
Query: 172 NGMLLNSKIVFVGKFIPRKEREKEL-----GEKAKLF-----TNVYIKNFGEDFNDEKLK 221
NG+ L +++VG+ + +RE+EL E+ F +N+Y+KN + NDEKLK
Sbjct: 286 NGISLGEDVLYVGRAQKKSDREEELRRKFEQERISRFEKLQGSNLYLKNLDDSVNDEKLK 345
Query: 222 EMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
EMF YG +TS +VM N+ G SRGFGFVAY +PE A A++ NGK + K LYV AQ+
Sbjct: 346 EMFSEYGNVTSCKVMMNSQGLSRGFGFVAYSNPEEALLAMKEMNGKMIGRKPLYVALAQR 405
Query: 281 KAERTQELKRRFEMLK 296
K ER L+ F ++
Sbjct: 406 KEERQAHLQSLFTQIR 421
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 118/225 (52%), Gaps = 17/225 (7%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
++++ +LD S++ + D F+ + + +V +D S GY +V+F E A++++E +
Sbjct: 46 SLYVGDLDPSVNESHLLDLFNQVAPVHNLRVCRDLTHRSLGYAYVNFANPEDASRAMESL 105
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTIT 231
N + + + + + ++ L K NV+IKN +++ L E F +GTI
Sbjct: 106 NYAPIRDRPIRI--MLSNRDPSTRLSGKG----NVFIKNLDASIDNKALYETFSSFGTIL 159
Query: 232 SYRV-MNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKR 290
S +V M+ G+S+G+GFV +E E A+ A+ NG ++ K ++VG ++ +R
Sbjct: 160 SCKVAMDVVGRSKGYGFVQFEKEETAQAAIDKLNGMLLNDKQVFVGHFVRRQDRA----- 214
Query: 291 RFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSA 335
R E + N+YVKNL I D+ L+K F +G I+SA
Sbjct: 215 RSESGAVPSF-----TNVYVKNLPKEITDDELKKTFGKYGDISSA 254
>gi|225458678|ref|XP_002284923.1| PREDICTED: polyadenylate-binding protein 2 [Vitis vinifera]
gi|147773643|emb|CAN76464.1| hypothetical protein VITISV_017035 [Vitis vinifera]
Length = 640
Score = 297 bits (761), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 153/262 (58%), Positives = 197/262 (75%), Gaps = 3/262 (1%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D RALD +NF L G+PIRIM+S RDPS+RKSG N+FIKNLDKSIDNKA++DTFSAFG
Sbjct: 71 DAARALDLLNFTPLNGKPIRIMYSHRDPSIRKSGTANIFIKNLDKSIDNKALHDTFSAFG 130
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCK+A D G SKGYGFV F+ EE+A +I+K+NGML+N K V+VG+F+ ++ERE
Sbjct: 131 NILSCKIATDPSGQSKGYGFVQFDNEESAQNAIDKLNGMLINDKQVYVGQFLRKQERETA 190
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPE 254
L + F NVY+KN E +E LK +F +G ITS VM + DGKS+ FGFV +E+ +
Sbjct: 191 LNKTK--FNNVYVKNLSESTTEEDLKNIFGEFGIITSVVVMRDGDGKSKCFGFVNFENAD 248
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A +AV+A NGK+ D K YVG+AQKK ER ELK RFE E ++++QGVNLY+KNLD
Sbjct: 249 DAAEAVEALNGKKFDEKEWYVGKAQKKYERELELKGRFEQSMKEVVDKFQGVNLYIKNLD 308
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
DSI D++L++ F+ FGTITS K
Sbjct: 309 DSIGDDKLKELFSEFGTITSCK 330
Score = 127 bits (319), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 83/208 (39%), Positives = 120/208 (57%), Gaps = 11/208 (5%)
Query: 100 QRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFE 159
+R+ +L K+ NV++KNL +S + + + F FG I S V +D G SK +GFV+FE
Sbjct: 186 ERETALNKTKFNNVYVKNLSESTTEEDLKNIFGEFGIITSVVVMRDGDGKSKCFGFVNFE 245
Query: 160 TEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELG--------EKAKLF--TNVYIK 209
+ A +++E +NG + K +VGK + ERE EL E F N+YIK
Sbjct: 246 NADDAAEAVEALNGKKFDEKEWYVGKAQKKYERELELKGRFEQSMKEVVDKFQGVNLYIK 305
Query: 210 NFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGKSRGFGFVAYESPEFAEKAVQAWNGKEV 268
N + D+KLKE+F +GTITS +VM + G SRG GFVA+ + E A +A+ NGK V
Sbjct: 306 NLDDSIGDDKLKELFSEFGTITSCKVMRDPSGISRGSGFVAFSTSEEASRALTEMNGKMV 365
Query: 269 DGKILYVGRAQKKAERTQELKRRFEMLK 296
K LYV AQ+K ER L+ +F ++
Sbjct: 366 VSKPLYVALAQRKEERRARLQAQFSQMR 393
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/232 (30%), Positives = 125/232 (53%), Gaps = 23/232 (9%)
Query: 108 SGVGN---VFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQD-EQGNSKGYGFVHFETEEA 163
+GV N +++ +LD +I + +YD F G +LS +V +D S GYG+V++ +
Sbjct: 12 NGVANTASLYVGDLDVNITDSQLYDLFIQAGQVLSVRVCRDLSTRRSLGYGYVNYSNPQD 71
Query: 164 ANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEM 223
A ++++ +N LN K + + + R ++ G N++IKN + +++ L +
Sbjct: 72 AARALDLLNFTPLNGKPIRI-MYSHRDPSIRKSGT-----ANIFIKNLDKSIDNKALHDT 125
Query: 224 FEPYGTITSYRVMNN-DGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKA 282
F +G I S ++ + G+S+G+GFV +++ E A+ A+ NG ++ K +YVG+ +K
Sbjct: 126 FSAFGNILSCKIATDPSGQSKGYGFVQFDNEESAQNAIDKLNGMLINDKQVYVGQFLRKQ 185
Query: 283 ERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITS 334
ER LN+ + N+YVKNL +S +E L+ F FG ITS
Sbjct: 186 ERETA------------LNKTKFNNVYVKNLSESTTEEDLKNIFGEFGIITS 225
>gi|166786|gb|AAA32832.1| poly(A)-binding protein [Arabidopsis thaliana]
Length = 668
Score = 297 bits (761), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 144/262 (54%), Positives = 190/262 (72%), Gaps = 1/262 (0%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D RA++++N+ ++ RPIRIM S RDPS R SG GNVFIKNLD SIDNKA+Y+TFS+FG
Sbjct: 97 DASRAMESLNYAPIRDRPIRIMLSNRDPSTRLSGKGNVFIKNLDASIDNKALYETFSSFG 156
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCKVA D G SKGYGFV FE EE A +I+K+NGMLLN K VFVG F+ R++R +
Sbjct: 157 TILSCKVAMDVVGRSKGYGFVQFEKEETAQAAIDKLNGMLLNDKQVFVGHFVRRQDRARS 216
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPE 254
FTNVY+KN ++ D++LK+ F YG I+S VM + G SR FGFV + SPE
Sbjct: 217 ESGAVPSFTNVYVKNLPKEITDDELKKTFGKYGDISSAVVMKDQSGNSRSFGFVNFVSPE 276
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A AV+ NG + +LYVGRAQKK++R +EL+R+FE +I R + QG NLY+KNLD
Sbjct: 277 AAAVAVEKMNGISLGEDVLYVGRAQKKSDREEELRRKFEQERISRFEKLQGSNLYLKNLD 336
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
DS++DE+L++ F+ +G +TS K
Sbjct: 337 DSVNDEKLKEMFSEYGNVTSCK 358
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 85/196 (43%), Positives = 123/196 (62%), Gaps = 11/196 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV++KNL K I + + TF +G I S V +D+ GNS+ +GFV+F + EAA ++EK+
Sbjct: 226 NVYVKNLPKEITDDELKKTFGKYGDISSAVVMKDQSGNSRSFGFVNFVSPEAAAVAVEKM 285
Query: 172 NGMLLNSKIVFVGKFIPRKEREKEL-----GEKAKLF-----TNVYIKNFGEDFNDEKLK 221
NG+ L +++VG+ + +RE+EL E+ F +N+Y+KN + NDEKLK
Sbjct: 286 NGISLGEDVLYVGRAQKKSDREEELRRKFEQERISRFEKLQGSNLYLKNLDDSVNDEKLK 345
Query: 222 EMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
EMF YG +TS +VM N+ G SRGFGFVAY +PE A A++ NGK + K LYV AQ+
Sbjct: 346 EMFSEYGNVTSCKVMMNSQGLSRGFGFVAYSNPEEALLAMKEMNGKMIGRKPLYVALAQR 405
Query: 281 KAERTQELKRRFEMLK 296
K ER L+ F ++
Sbjct: 406 KEERQAHLQSLFTQIR 421
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 118/225 (52%), Gaps = 17/225 (7%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
++++ +LD S++ + D F+ + + +V +D S GY +V+F E A++++E +
Sbjct: 46 SLYVGDLDPSVNESHLLDLFNQVAPVHNLRVCRDLTHRSLGYAYVNFANPEDASRAMESL 105
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTIT 231
N + + + + + ++ L K NV+IKN +++ L E F +GTI
Sbjct: 106 NYAPIRDRPIRI--MLSNRDPSTRLSGKG----NVFIKNLDASIDNKALYETFSSFGTIL 159
Query: 232 SYRV-MNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKR 290
S +V M+ G+S+G+GFV +E E A+ A+ NG ++ K ++VG ++ +R
Sbjct: 160 SCKVAMDVVGRSKGYGFVQFEKEETAQAAIDKLNGMLLNDKQVFVGHFVRRQDRA----- 214
Query: 291 RFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSA 335
R E + N+YVKNL I D+ L+K F +G I+SA
Sbjct: 215 RSESGAVPSF-----TNVYVKNLPKEITDDELKKTFGKYGDISSA 254
>gi|302785327|ref|XP_002974435.1| hypothetical protein SELMODRAFT_101161 [Selaginella moellendorffii]
gi|300158033|gb|EFJ24657.1| hypothetical protein SELMODRAFT_101161 [Selaginella moellendorffii]
Length = 642
Score = 297 bits (761), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 149/262 (56%), Positives = 195/262 (74%), Gaps = 3/262 (1%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D RAL+ +NF + G+PIRIM+S RDPS+RKSG+ N+FIKNLDKSIDNKA+YDTF+ FG
Sbjct: 90 DASRALEMLNFSLVNGKPIRIMFSHRDPSIRKSGMANIFIKNLDKSIDNKALYDTFAQFG 149
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCKVA D G S+GYGFV FE E+AA +I++VNGMLL K VFVG F+ R+ER +
Sbjct: 150 NILSCKVAVDSSGQSRGYGFVQFEQEDAAQSAIKQVNGMLLIEKQVFVGPFVRRQER--D 207
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGKSRGFGFVAYESPE 254
L F NVY+KN G+ D+ LK +F +G I+S VM + +GKS+ FGFV +E+ +
Sbjct: 208 LTGGVTKFNNVYVKNLGDATTDDDLKRVFGEFGPISSAVVMRDPEGKSKCFGFVNFENAD 267
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A AV+ NGK++D K YVGRAQKK+ER EL+ R++ + ER ++YQGVNLY+KNLD
Sbjct: 268 DAALAVEELNGKKMDDKEWYVGRAQKKSEREAELRARYDQERKERSDKYQGVNLYLKNLD 327
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
D+IDD++LR+ F FGTI S K
Sbjct: 328 DTIDDDKLRELFHGFGTIISCK 349
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 72/192 (37%), Positives = 112/192 (58%), Gaps = 16/192 (8%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV++KNL + + + F FG I S V +D +G SK +GFV+FE + A ++E++
Sbjct: 217 NVYVKNLGDATTDDDLKRVFGEFGPISSAVVMRDPEGKSKCFGFVNFENADDAALAVEEL 276
Query: 172 NGMLLNSKIVFVGKFIPRKEREKEL--------GEKAKLF--TNVYIKNFGEDFNDEKLK 221
NG ++ K +VG+ + ERE EL E++ + N+Y+KN + +D+KL+
Sbjct: 277 NGKKMDDKEWYVGRAQKKSEREAELRARYDQERKERSDKYQGVNLYLKNLDDTIDDDKLR 336
Query: 222 EMFEPYGTITSYRVMNN-DGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
E+F +GTI S +VM + G S+G GFVA+ + E A +A+ NG+ V K +YV AQK
Sbjct: 337 ELFHGFGTIISCKVMRDPQGHSKGSGFVAFSTTEEANRAMTEMNGRMVANKPIYVALAQK 396
Query: 281 KAERTQELKRRF 292
+ ER RRF
Sbjct: 397 RDER-----RRF 403
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 124/226 (54%), Gaps = 20/226 (8%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSIEK 170
++++ +LD ++ +YD F+ +LS +V +D S GY +V++ T + A++++E
Sbjct: 38 SLYVGDLDPNVTEGQLYDVFNQVAPVLSIRVCRDLISKRSLGYAYVNYNTGQDASRALEM 97
Query: 171 VNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTI 230
+N L+N K + + F R ++ G N++IKN + +++ L + F +G I
Sbjct: 98 LNFSLVNGKPIRI-MFSHRDPSIRKSG-----MANIFIKNLDKSIDNKALYDTFAQFGNI 151
Query: 231 TSYRV-MNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELK 289
S +V +++ G+SRG+GFV +E + A+ A++ NG + K ++VG ++ ER
Sbjct: 152 LSCKVAVDSSGQSRGYGFVQFEQEDAAQSAIKQVNGMLLIEKQVFVGPFVRRQERDL--- 208
Query: 290 RRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSA 335
+ + N N+YVKNL D+ D+ L++ F FG I+SA
Sbjct: 209 ----TGGVTKFN-----NVYVKNLGDATTDDDLKRVFGEFGPISSA 245
>gi|297802580|ref|XP_002869174.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297315010|gb|EFH45433.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 625
Score = 297 bits (760), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 148/262 (56%), Positives = 193/262 (73%), Gaps = 3/262 (1%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D RA+ +N+ L G+PIR+M+S RDPS+R+SG GN+FIKNLD+SID+KA++DTFS FG
Sbjct: 89 DAARAIQELNYIPLYGKPIRVMYSHRDPSVRRSGAGNIFIKNLDESIDHKALHDTFSVFG 148
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+I+SCKVA D G SKGYGFV + EE+A K+IEK+NGMLLN K V+VG F+ R+ER+
Sbjct: 149 NIVSCKVAVDSSGQSKGYGFVQYANEESAQKAIEKLNGMLLNDKQVYVGPFLRRQERDS- 207
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPE 254
K K FTNVY+KN E D+ LK F YG ITS VM + DGKS+GFGFV +E+ +
Sbjct: 208 TANKTK-FTNVYVKNLAESTTDDDLKNAFGEYGKITSAVVMKDGDGKSKGFGFVNFENAD 266
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A +AV++ NG + D K YVGRAQKK+ER EL+ R+E E +++Q NLYVKNLD
Sbjct: 267 DAARAVESLNGHKFDDKEWYVGRAQKKSERETELRVRYEQNLKEAADKFQSSNLYVKNLD 326
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
SI DE+L++ F+PFGT+TS K
Sbjct: 327 PSISDEKLKEIFSPFGTVTSCK 348
Score = 140 bits (353), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 78/202 (38%), Positives = 122/202 (60%), Gaps = 11/202 (5%)
Query: 100 QRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFE 159
+RD + K+ NV++KNL +S + + + F +G I S V +D G SKG+GFV+FE
Sbjct: 204 ERDSTANKTKFTNVYVKNLAESTTDDDLKNAFGEYGKITSAVVMKDGDGKSKGFGFVNFE 263
Query: 160 TEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKEL--------GEKAKLF--TNVYIK 209
+ A +++E +NG + K +VG+ + ERE EL E A F +N+Y+K
Sbjct: 264 NADDAARAVESLNGHKFDDKEWYVGRAQKKSERETELRVRYEQNLKEAADKFQSSNLYVK 323
Query: 210 NFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGKSRGFGFVAYESPEFAEKAVQAWNGKEV 268
N +DEKLKE+F P+GT+TS +VM + +G S+G GFVA+ +PE A +A+ +GK +
Sbjct: 324 NLDPSISDEKLKEIFSPFGTVTSCKVMRDPNGTSKGSGFVAFSTPEEATEAMSQLSGKMI 383
Query: 269 DGKILYVGRAQKKAERTQELKR 290
+ K LYV AQ+K +R + +
Sbjct: 384 ESKPLYVAIAQRKEDRRAQFSQ 405
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 125/229 (54%), Gaps = 20/229 (8%)
Query: 109 GVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQD-EQGNSKGYGFVHFETEEAANKS 167
G ++++ +LD ++ + ++D FS G ++S +V +D S GYG+V+F + A ++
Sbjct: 34 GTTSLYVGDLDVNVTDSQLFDAFSQMGPVVSVRVCRDLATRRSLGYGYVNFTNPQDAARA 93
Query: 168 IEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPY 227
I+++N + L K + V + R + G N++IKN E + + L + F +
Sbjct: 94 IQELNYIPLYGKPIRV-MYSHRDPSVRRSGAG-----NIFIKNLDESIDHKALHDTFSVF 147
Query: 228 GTITSYRV-MNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQ 286
G I S +V +++ G+S+G+GFV Y + E A+KA++ NG ++ K +YVG ++ ER
Sbjct: 148 GNIVSCKVAVDSSGQSKGYGFVQYANEESAQKAIEKLNGMLLNDKQVYVGPFLRRQERD- 206
Query: 287 ELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSA 335
N+ + N+YVKNL +S D+ L+ F +G ITSA
Sbjct: 207 -----------STANKTKFTNVYVKNLAESTTDDDLKNAFGEYGKITSA 244
>gi|357437769|ref|XP_003589160.1| Polyadenylate-binding protein [Medicago truncatula]
gi|355478208|gb|AES59411.1| Polyadenylate-binding protein [Medicago truncatula]
Length = 647
Score = 297 bits (760), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 148/263 (56%), Positives = 197/263 (74%), Gaps = 4/263 (1%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D RALD +NF + + IR+M+S RDPS RKSG N+FIKNLDK+ID+KA++DTFS+FG
Sbjct: 85 DAARALDVLNFTPMNNKSIRVMYSHRDPSSRKSGTANIFIKNLDKTIDHKALHDTFSSFG 144
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
I+SCK+A D G SKGYGFV FE E++A +I+K+NGML+N K VFVG F+ +++R+
Sbjct: 145 QIMSCKIATDGSGQSKGYGFVQFEAEDSAQNAIDKLNGMLINDKQVFVGHFLRKQDRDNV 204
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGKSRGFGFVAYESPE 254
L + F NVY+KN E F ++ LK F YGTITS +M + DG+S+ FGFV +E+ E
Sbjct: 205 LSKTK--FNNVYVKNLSESFTEDDLKNEFGAYGTITSAVLMRDADGRSKCFGFVNFENAE 262
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEM-LKIERLNRYQGVNLYVKNL 313
A KAV+A NGK+VD K YVG+AQKK+ER QELK RFE +K ++++QG+NLY+KNL
Sbjct: 263 DAAKAVEALNGKKVDDKEWYVGKAQKKSEREQELKGRFEQTVKESVVDKFQGLNLYLKNL 322
Query: 314 DDSIDDERLRKEFTPFGTITSAK 336
DDSI DE+L++ F+ FGTITS K
Sbjct: 323 DDSITDEKLKEMFSEFGTITSYK 345
Score = 147 bits (370), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 83/208 (39%), Positives = 124/208 (59%), Gaps = 12/208 (5%)
Query: 101 RDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFET 160
RD L K+ NV++KNL +S + + F A+G+I S + +D G SK +GFV+FE
Sbjct: 201 RDNVLSKTKFNNVYVKNLSESFTEDDLKNEFGAYGTITSAVLMRDADGRSKCFGFVNFEN 260
Query: 161 EEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFT-----------NVYIK 209
E A K++E +NG ++ K +VGK + ERE+EL + + N+Y+K
Sbjct: 261 AEDAAKAVEALNGKKVDDKEWYVGKAQKKSEREQELKGRFEQTVKESVVDKFQGLNLYLK 320
Query: 210 NFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGKSRGFGFVAYESPEFAEKAVQAWNGKEV 268
N + DEKLKEMF +GTITSY++M + +G SRG GFVA+ +PE A +A+ NGK +
Sbjct: 321 NLDDSITDEKLKEMFSEFGTITSYKIMRDPNGVSRGSGFVAFSTPEEASRALGEMNGKMI 380
Query: 269 DGKILYVGRAQKKAERTQELKRRFEMLK 296
K LYV AQ+K +R L+ +F ++
Sbjct: 381 VSKPLYVAVAQRKEDRRARLQAQFSQMR 408
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 126/227 (55%), Gaps = 22/227 (9%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQD-EQGNSKGYGFVHFETEEAANKSIEK 170
++++ +L+ ++++ +YD F+ G ++S +V +D S GYG+V+F + A ++++
Sbjct: 33 SLYVGDLEVNVNDSQLYDLFNQVGQVVSVRVCRDLATRRSLGYGYVNFTNPQDAARALDV 92
Query: 171 VNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTI 230
+N +N+K + V + R ++ G N++IKN + + + L + F +G I
Sbjct: 93 LNFTPMNNKSIRV-MYSHRDPSSRKSGT-----ANIFIKNLDKTIDHKALHDTFSSFGQI 146
Query: 231 TSYRVMNN-DGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL- 288
S ++ + G+S+G+GFV +E+ + A+ A+ NG ++ K ++VG +K +R L
Sbjct: 147 MSCKIATDGSGQSKGYGFVQFEAEDSAQNAIDKLNGMLINDKQVFVGHFLRKQDRDNVLS 206
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSA 335
K +F N+YVKNL +S ++ L+ EF +GTITSA
Sbjct: 207 KTKFN-------------NVYVKNLSESFTEDDLKNEFGAYGTITSA 240
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 66/136 (48%), Gaps = 20/136 (14%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDG--KSRGFGFVAYESPEFAEKAVQ 261
T++Y+ + + ND +L ++F G + S RV + +S G+G+V + +P+ A +A+
Sbjct: 32 TSLYVGDLEVNVNDSQLYDLFNQVGQVVSVRVCRDLATRRSLGYGYVNFTNPQDAARALD 91
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQG-VNLYVKNLDDSIDDE 320
N ++ K + V + + +R G N+++KNLD +ID +
Sbjct: 92 VLNFTPMNNKSIRVMYSHRDPS-----------------SRKSGTANIFIKNLDKTIDHK 134
Query: 321 RLRKEFTPFGTITSAK 336
L F+ FG I S K
Sbjct: 135 ALHDTFSSFGQIMSCK 150
>gi|242076392|ref|XP_002448132.1| hypothetical protein SORBIDRAFT_06g021850 [Sorghum bicolor]
gi|241939315|gb|EES12460.1| hypothetical protein SORBIDRAFT_06g021850 [Sorghum bicolor]
Length = 664
Score = 296 bits (759), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 148/263 (56%), Positives = 195/263 (74%), Gaps = 3/263 (1%)
Query: 75 LDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAF 134
LD RAL+ +NF L +PIR+M+S RDPS R+SG N+FIKNLDK+IDNK +++TFS+F
Sbjct: 98 LDAARALEVLNFAVLNNKPIRVMYSNRDPSSRRSGSANIFIKNLDKTIDNKTLHETFSSF 157
Query: 135 GSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREK 194
G+ILSCKVA DE G SKG+GFV +E EEAA +I+ +NGML+N K VFVG F+ ++ER+
Sbjct: 158 GTILSCKVAMDEAGQSKGFGFVQYEKEEAAQNAIKSLNGMLINDKPVFVGPFLRKQERDH 217
Query: 195 ELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESP 253
+K K F NV++KN E E L ++F YG+ITS VM DGKSR FGF+ +E+P
Sbjct: 218 SF-DKTK-FNNVFVKNLSESTTKEDLLKVFGEYGSITSAVVMIGMDGKSRCFGFINFENP 275
Query: 254 EFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNL 313
+ A +AVQ NGK+++ K YVGRAQKK+ER ELKRRFE + ++YQG+NLY+KNL
Sbjct: 276 DAASRAVQELNGKKINDKEWYVGRAQKKSEREMELKRRFEQSLKDAADKYQGLNLYLKNL 335
Query: 314 DDSIDDERLRKEFTPFGTITSAK 336
DDSI D++LR+ F+ FG ITS K
Sbjct: 336 DDSIGDDQLRELFSNFGKITSYK 358
Score = 134 bits (337), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 78/235 (33%), Positives = 134/235 (57%), Gaps = 15/235 (6%)
Query: 77 TERALDTMNFDALKGRPIRI----MWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFS 132
+ A+ ++N + +P+ + +RD S K+ NVF+KNL +S + + F
Sbjct: 187 AQNAIKSLNGMLINDKPVFVGPFLRKQERDHSFDKTKFNNVFVKNLSESTTKEDLLKVFG 246
Query: 133 AFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKER 192
+GSI S V G S+ +GF++FE +AA+++++++NG +N K +VG+ + ER
Sbjct: 247 EYGSITSAVVMIGMDGKSRCFGFINFENPDAASRAVQELNGKKINDKEWYVGRAQKKSER 306
Query: 193 EKELGEKAKLFT----------NVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGK 241
E EL + + N+Y+KN + D++L+E+F +G ITSY+VM + +G
Sbjct: 307 EMELKRRFEQSLKDAADKYQGLNLYLKNLDDSIGDDQLRELFSNFGKITSYKVMRDQNGL 366
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLK 296
S+G GFVA+ + E A +A+ NGK + GK LYV AQ+K +R L+ +F ++
Sbjct: 367 SKGSGFVAFSTREEASQALTEMNGKMISGKPLYVAFAQRKEDRKAMLQAQFSQMR 421
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/227 (32%), Positives = 124/227 (54%), Gaps = 22/227 (9%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGN-SKGYGFVHFETEEAANKSIEK 170
++++ +L+ S+ + +Y+ FS G ++S +V +D S GY +V+F A +++E
Sbjct: 47 SLYVGDLEGSVSDSQLYELFSQAGQVVSVRVCRDVTSRRSLGYAYVNFSNPLDAARALEV 106
Query: 171 VNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTI 230
+N +LN+K + V + R + G N++IKN + +++ L E F +GTI
Sbjct: 107 LNFAVLNNKPIRV-MYSNRDPSSRRSGS-----ANIFIKNLDKTIDNKTLHETFSSFGTI 160
Query: 231 TSYRV-MNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL- 288
S +V M+ G+S+GFGFV YE E A+ A+++ NG ++ K ++VG +K ER
Sbjct: 161 LSCKVAMDEAGQSKGFGFVQYEKEEAAQNAIKSLNGMLINDKPVFVGPFLRKQERDHSFD 220
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSA 335
K +F N++VKNL +S E L K F +G+ITSA
Sbjct: 221 KTKFN-------------NVFVKNLSESTTKEDLLKVFGEYGSITSA 254
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 65/135 (48%), Gaps = 18/135 (13%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQ 261
T++Y+ + +D +L E+F G + S RV + +S G+ +V + +P A +A++
Sbjct: 46 TSLYVGDLEGSVSDSQLYELFSQAGQVVSVRVCRDVTSRRSLGYAYVNFSNPLDAARALE 105
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDER 321
N ++ K + V + + R N+++KNLD +ID++
Sbjct: 106 VLNFAVLNNKPIRVMYSNRDPSS----------------RRSGSANIFIKNLDKTIDNKT 149
Query: 322 LRKEFTPFGTITSAK 336
L + F+ FGTI S K
Sbjct: 150 LHETFSSFGTILSCK 164
>gi|34015145|gb|AAQ56342.1| putative poly(A)-binding protein [Oryza sativa Japonica Group]
gi|125561054|gb|EAZ06502.1| hypothetical protein OsI_28747 [Oryza sativa Indica Group]
gi|125602953|gb|EAZ42278.1| hypothetical protein OsJ_26851 [Oryza sativa Japonica Group]
Length = 456
Score = 296 bits (759), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 159/280 (56%), Positives = 194/280 (69%), Gaps = 6/280 (2%)
Query: 59 QLGSGAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNL 118
+L G V P D RAL+ +NF + G+PIRIM+S RDPS RKSG N+FIKNL
Sbjct: 77 RLSLGYAYVNFSSP--ADAARALEMLNFTPINGKPIRIMYSNRDPSSRKSGAANIFIKNL 134
Query: 119 DKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNS 178
DKSIDNKA+YDTFS FG+ILSCKVA + G SKGYGFV FE EEAA +I K+NGMLLN
Sbjct: 135 DKSIDNKALYDTFSVFGNILSCKVATEMSGESKGYGFVQFELEEAAQNAISKLNGMLLND 194
Query: 179 KIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-N 237
K V+VG F+ ++ERE G F NVY+KN E ++ LKE+F +G ITS VM
Sbjct: 195 KKVYVGPFVRKQERENVSGNPK--FNNVYVKNLSESTTEDNLKEIFGKFGPITSVVVMRE 252
Query: 238 NDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKI 297
DGKSR FGFV +E+P+ A +AV+ NGK+ D K YV RAQKK+ER ELK +FE
Sbjct: 253 GDGKSRCFGFVNFENPDDAARAVEDLNGKKFDDKEWYVCRAQKKSEREMELKEKFEKNIK 312
Query: 298 ERLNRYQGVNLYVKNLDDSI-DDERLRKEFTPFGTITSAK 336
E ++ QG NLY+KNLDDSI DDE+L++ F FGTITS K
Sbjct: 313 EAADKNQGTNLYLKNLDDSIDDDEKLKEIFADFGTITSCK 352
Score = 127 bits (319), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 77/197 (39%), Positives = 116/197 (58%), Gaps = 12/197 (6%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV++KNL +S + + F FG I S V ++ G S+ +GFV+FE + A +++E +
Sbjct: 219 NVYVKNLSESTTEDNLKEIFGKFGPITSVVVMREGDGKSRCFGFVNFENPDDAARAVEDL 278
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEK----------AKLFTNVYIKNFGEDFND-EKL 220
NG + K +V + + ERE EL EK TN+Y+KN + +D EKL
Sbjct: 279 NGKKFDDKEWYVCRAQKKSEREMELKEKFEKNIKEAADKNQGTNLYLKNLDDSIDDDEKL 338
Query: 221 KEMFEPYGTITSYRVMNN-DGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQ 279
KE+F +GTITS +VM + +G S+G GFVA++S E A +A+ A NGK + K LYV AQ
Sbjct: 339 KEIFADFGTITSCKVMRDLNGVSKGSGFVAFKSAEDASRALVAMNGKMIGSKPLYVALAQ 398
Query: 280 KKAERTQELKRRFEMLK 296
+K ER L+ +F ++
Sbjct: 399 RKEERRARLQAQFSQMR 415
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 120/225 (53%), Gaps = 20/225 (8%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGN-SKGYGFVHFETEEAANKSIEK 170
++++ +LD S+ + ++D FS GS++S +V +D S GY +V+F + A +++E
Sbjct: 40 SLYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRLSLGYAYVNFSSPADAARALEM 99
Query: 171 VNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTI 230
+N +N K + + + R ++ G N++IKN + +++ L + F +G I
Sbjct: 100 LNFTPINGKPIRI-MYSNRDPSSRKSGA-----ANIFIKNLDKSIDNKALYDTFSVFGNI 153
Query: 231 TSYRVMNN-DGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELK 289
S +V G+S+G+GFV +E E A+ A+ NG ++ K +YVG +K ER
Sbjct: 154 LSCKVATEMSGESKGYGFVQFELEEAAQNAISKLNGMLLNDKKVYVGPFVRKQEREN--- 210
Query: 290 RRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITS 334
+ + N N+YVKNL +S ++ L++ F FG ITS
Sbjct: 211 ----VSGNPKFN-----NVYVKNLSESTTEDNLKEIFGKFGPITS 246
>gi|357145576|ref|XP_003573691.1| PREDICTED: polyadenylate-binding protein 2-like [Brachypodium
distachyon]
Length = 663
Score = 296 bits (758), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 149/263 (56%), Positives = 193/263 (73%), Gaps = 4/263 (1%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D RA++ +NF + G+PIRIM+S RDPS RKSG N+FIKNLDKSIDNKA++DTFSAFG
Sbjct: 95 DAARAMEMLNFTPVNGKPIRIMYSNRDPSSRKSGAANIFIKNLDKSIDNKALFDTFSAFG 154
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCKVA + G SKGYGFV +E +E+A +I ++NGMLLN K V+VG F+ ++ERE
Sbjct: 155 TILSCKVATEISGESKGYGFVQYEQDESAQNAINELNGMLLNDKKVYVGPFVRKQERENV 214
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMN-NDGKSRGFGFVAYESPE 254
G F NVY+KN E ++ LKEMF +G ITS V+ +DGKSR FGFV +E+P+
Sbjct: 215 FGSPK--FNNVYVKNLSESTTEDNLKEMFGKFGPITSVIVVRADDGKSRCFGFVNFENPD 272
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A +AV+ NGK++D K LYVGRAQKK+ER +LK +FE E ++ QG NLY+KNLD
Sbjct: 273 DAARAVEDLNGKKLDDKELYVGRAQKKSEREMQLKEKFEKSNKETADKNQGTNLYLKNLD 332
Query: 315 DSI-DDERLRKEFTPFGTITSAK 336
S+ DDE+L++ F FGTITS K
Sbjct: 333 GSVDDDEKLKELFAEFGTITSCK 355
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/193 (40%), Positives = 118/193 (61%), Gaps = 12/193 (6%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV++KNL +S + + F FG I S V + + G S+ +GFV+FE + A +++E +
Sbjct: 222 NVYVKNLSESTTEDNLKEMFGKFGPITSVIVVRADDGKSRCFGFVNFENPDDAARAVEDL 281
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEK----------AKLFTNVYIKNF-GEDFNDEKL 220
NG L+ K ++VG+ + ERE +L EK TN+Y+KN G +DEKL
Sbjct: 282 NGKKLDDKELYVGRAQKKSEREMQLKEKFEKSNKETADKNQGTNLYLKNLDGSVDDDEKL 341
Query: 221 KEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQ 279
KE+F +GTITS +VM +++G ++G GFVA++S E A +A+ A NGK V K LYV AQ
Sbjct: 342 KELFAEFGTITSCKVMRDSNGVNKGSGFVAFKSSEDASRALVAMNGKMVGSKPLYVALAQ 401
Query: 280 KKAERTQELKRRF 292
+K ER L+ +F
Sbjct: 402 RKEERRARLQAQF 414
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 121/225 (53%), Gaps = 20/225 (8%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGN-SKGYGFVHFETEEAANKSIEK 170
++++ +LD S+ + ++D FS GS++S +V +D S GY +V+F + A +++E
Sbjct: 43 SLYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARAMEM 102
Query: 171 VNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTI 230
+N +N K + + + R ++ G N++IKN + +++ L + F +GTI
Sbjct: 103 LNFTPVNGKPIRI-MYSNRDPSSRKSGA-----ANIFIKNLDKSIDNKALFDTFSAFGTI 156
Query: 231 TSYRVMNN-DGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELK 289
S +V G+S+G+GFV YE E A+ A+ NG ++ K +YVG +K ER
Sbjct: 157 LSCKVATEISGESKGYGFVQYEQDESAQNAINELNGMLLNDKKVYVGPFVRKQERE---- 212
Query: 290 RRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITS 334
+ + N N+YVKNL +S ++ L++ F FG ITS
Sbjct: 213 ---NVFGSPKFN-----NVYVKNLSESTTEDNLKEMFGKFGPITS 249
>gi|356514396|ref|XP_003525892.1| PREDICTED: polyadenylate-binding protein 2-like [Glycine max]
Length = 630
Score = 296 bits (757), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 152/263 (57%), Positives = 191/263 (72%), Gaps = 5/263 (1%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D +A+D +NF L G+ IRIM+S RDPS RKSG NVFIKNLDK+ID+KA++DTFSAFG
Sbjct: 77 DAAKAIDVLNFTPLNGKTIRIMYSIRDPSARKSGAANVFIKNLDKAIDHKALFDTFSAFG 136
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCK+A D G SKG+GFV FE+EE+A +I+K+NGML+N K V+VG F +++RE
Sbjct: 137 NILSCKIATDASGQSKGHGFVQFESEESAQNAIDKLNGMLINDKQVYVGPFQRKQDRESA 196
Query: 196 L-GEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGKSRGFGFVAYESP 253
L G K F NVY+KN E + LK +F YG ITS VM + DGKS+GFGFV + +
Sbjct: 197 LSGTK---FNNVYVKNLFEATTEADLKSIFGEYGAITSAVVMRDVDGKSKGFGFVNFANV 253
Query: 254 EFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNL 313
E A KAV+A NGK DGK YVG+AQKK+ER ELK R E E +++Y G NLY+KNL
Sbjct: 254 EDAAKAVEALNGKNFDGKEWYVGKAQKKSERELELKERNEQSTKETVDKYHGTNLYIKNL 313
Query: 314 DDSIDDERLRKEFTPFGTITSAK 336
DDS+ DE LR+ F+ FGTITS K
Sbjct: 314 DDSVGDEELRELFSEFGTITSCK 336
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 81/203 (39%), Positives = 116/203 (57%), Gaps = 11/203 (5%)
Query: 101 RDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFET 160
R+ +L + NV++KNL ++ + F +G+I S V +D G SKG+GFV+F
Sbjct: 193 RESALSGTKFNNVYVKNLFEATTEADLKSIFGEYGAITSAVVMRDVDGKSKGFGFVNFAN 252
Query: 161 EEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFT----------NVYIKN 210
E A K++E +NG + K +VGK + ERE EL E+ + T N+YIKN
Sbjct: 253 VEDAAKAVEALNGKNFDGKEWYVGKAQKKSERELELKERNEQSTKETVDKYHGTNLYIKN 312
Query: 211 FGEDFNDEKLKEMFEPYGTITSYRVMNN-DGKSRGFGFVAYESPEFAEKAVQAWNGKEVD 269
+ DE+L+E+F +GTITS +VM + G SRG GFVA+ E A A+ NGK V
Sbjct: 313 LDDSVGDEELRELFSEFGTITSCKVMRDPSGISRGSGFVAFSIAEGASWALGEMNGKMVA 372
Query: 270 GKILYVGRAQKKAERTQELKRRF 292
GK LYV AQ+K +R L+ +F
Sbjct: 373 GKPLYVALAQRKEDRRARLQAQF 395
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 118/227 (51%), Gaps = 22/227 (9%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQD-EQGNSKGYGFVHFETEEAANKSIEK 170
++++ +LD +++ +YD F+ ++S ++ +D S GYG+V+F A K+I+
Sbjct: 25 SLYVGDLDHDVNDPQLYDLFNQVAQVVSVRICRDVATQQSLGYGYVNFSNARDAAKAIDV 84
Query: 171 VNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTI 230
+N LN K + + I R ++ G NV+IKN + + + L + F +G I
Sbjct: 85 LNFTPLNGKTIRIMYSI-RDPSARKSGA-----ANVFIKNLDKAIDHKALFDTFSAFGNI 138
Query: 231 TSYRVMNN-DGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELK 289
S ++ + G+S+G GFV +ES E A+ A+ NG ++ K +YVG Q+K +R L
Sbjct: 139 LSCKIATDASGQSKGHGFVQFESEESAQNAIDKLNGMLINDKQVYVGPFQRKQDRESALS 198
Query: 290 -RRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSA 335
+F N+YVKNL ++ + L+ F +G ITSA
Sbjct: 199 GTKFN-------------NVYVKNLFEATTEADLKSIFGEYGAITSA 232
>gi|240256156|ref|NP_195137.5| Polyadenylate-binding protein 2 [Arabidopsis thaliana]
gi|1171978|sp|P42731.1|PABP2_ARATH RecName: Full=Polyadenylate-binding protein 2; Short=PABP-2;
Short=Poly(A)-binding protein 2
gi|304109|gb|AAA61780.1| poly(A)-binding protein [Arabidopsis thaliana]
gi|2911051|emb|CAA17561.1| poly(A)-binding protein [Arabidopsis thaliana]
gi|7270360|emb|CAB80128.1| poly(A)-binding protein [Arabidopsis thaliana]
gi|26983870|gb|AAN86187.1| putative polyadenylate-binding protein 2 (PABP2) [Arabidopsis
thaliana]
gi|332660925|gb|AEE86325.1| Polyadenylate-binding protein 2 [Arabidopsis thaliana]
Length = 629
Score = 296 bits (757), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 147/262 (56%), Positives = 195/262 (74%), Gaps = 3/262 (1%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D RA+ +N+ L G+PIR+M+S RDPS+R+SG GN+FIKNLD+SID+KA++DTFS+FG
Sbjct: 89 DAARAIQELNYIPLYGKPIRVMYSHRDPSVRRSGAGNIFIKNLDESIDHKALHDTFSSFG 148
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+I+SCKVA D G SKGYGFV + EE+A K+IEK+NGMLLN K V+VG F+ R+ER+
Sbjct: 149 NIVSCKVAVDSSGQSKGYGFVQYANEESAQKAIEKLNGMLLNDKQVYVGPFLRRQERDS- 207
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPE 254
K K FTNVY+KN E D+ LK F YG ITS VM + +GKS+GFGFV +E+ +
Sbjct: 208 TANKTK-FTNVYVKNLAESTTDDDLKNAFGEYGKITSAVVMKDGEGKSKGFGFVNFENAD 266
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A +AV++ NG + D K YVGRAQKK+ER EL+ R+E E +++Q NLYVKNLD
Sbjct: 267 DAARAVESLNGHKFDDKEWYVGRAQKKSERETELRVRYEQNLKEAADKFQSSNLYVKNLD 326
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
SI DE+L++ F+PFGT+TS+K
Sbjct: 327 PSISDEKLKEIFSPFGTVTSSK 348
Score = 144 bits (364), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 80/208 (38%), Positives = 127/208 (61%), Gaps = 11/208 (5%)
Query: 100 QRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFE 159
+RD + K+ NV++KNL +S + + + F +G I S V +D +G SKG+GFV+FE
Sbjct: 204 ERDSTANKTKFTNVYVKNLAESTTDDDLKNAFGEYGKITSAVVMKDGEGKSKGFGFVNFE 263
Query: 160 TEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKEL--------GEKAKLF--TNVYIK 209
+ A +++E +NG + K +VG+ + ERE EL E A F +N+Y+K
Sbjct: 264 NADDAARAVESLNGHKFDDKEWYVGRAQKKSERETELRVRYEQNLKEAADKFQSSNLYVK 323
Query: 210 NFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGKSRGFGFVAYESPEFAEKAVQAWNGKEV 268
N +DEKLKE+F P+GT+TS +VM + +G S+G GFVA+ +PE A +A+ +GK +
Sbjct: 324 NLDPSISDEKLKEIFSPFGTVTSSKVMRDPNGTSKGSGFVAFATPEEATEAMSQLSGKMI 383
Query: 269 DGKILYVGRAQKKAERTQELKRRFEMLK 296
+ K LYV AQ+K +R L+ +F ++
Sbjct: 384 ESKPLYVAIAQRKEDRRVRLQAQFSQVR 411
Score = 107 bits (267), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 125/229 (54%), Gaps = 20/229 (8%)
Query: 109 GVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQD-EQGNSKGYGFVHFETEEAANKS 167
G ++++ +LD ++ + ++D F G++++ +V +D S GYG+V+F + A ++
Sbjct: 34 GNTSLYVGDLDFNVTDSQLFDAFGQMGTVVTVRVCRDLVTRRSLGYGYVNFTNPQDAARA 93
Query: 168 IEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPY 227
I+++N + L K + V + R + G N++IKN E + + L + F +
Sbjct: 94 IQELNYIPLYGKPIRV-MYSHRDPSVRRSGAG-----NIFIKNLDESIDHKALHDTFSSF 147
Query: 228 GTITSYRV-MNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQ 286
G I S +V +++ G+S+G+GFV Y + E A+KA++ NG ++ K +YVG ++ ER
Sbjct: 148 GNIVSCKVAVDSSGQSKGYGFVQYANEESAQKAIEKLNGMLLNDKQVYVGPFLRRQERD- 206
Query: 287 ELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSA 335
N+ + N+YVKNL +S D+ L+ F +G ITSA
Sbjct: 207 -----------STANKTKFTNVYVKNLAESTTDDDLKNAFGEYGKITSA 244
>gi|19347816|gb|AAL86321.1| putative poly(A)-binding protein [Arabidopsis thaliana]
Length = 613
Score = 296 bits (757), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 147/262 (56%), Positives = 195/262 (74%), Gaps = 3/262 (1%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D RA+ +N+ L G+PIR+M+S RDPS+R+SG GN+FIKNLD+SID+KA++DTFS+FG
Sbjct: 73 DAARAIQELNYIPLYGKPIRVMYSHRDPSVRRSGAGNIFIKNLDESIDHKALHDTFSSFG 132
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+I+SCKVA D G SKGYGFV + EE+A K+IEK+NGMLLN K V+VG F+ R+ER+
Sbjct: 133 NIVSCKVAVDSSGQSKGYGFVQYANEESAQKAIEKLNGMLLNDKQVYVGPFLRRQERD-S 191
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPE 254
K K FTNVY+KN E D+ LK F YG ITS VM + +GKS+GFGFV +E+ +
Sbjct: 192 TANKTK-FTNVYVKNLAESTTDDDLKNAFGEYGKITSAVVMKDGEGKSKGFGFVNFENAD 250
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A +AV++ NG + D K YVGRAQKK+ER EL+ R+E E +++Q NLYVKNLD
Sbjct: 251 DAARAVESLNGHKFDDKEWYVGRAQKKSERETELRVRYEQNLKEAADKFQSSNLYVKNLD 310
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
SI DE+L++ F+PFGT+TS+K
Sbjct: 311 PSISDEKLKEIFSPFGTVTSSK 332
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 80/208 (38%), Positives = 127/208 (61%), Gaps = 11/208 (5%)
Query: 100 QRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFE 159
+RD + K+ NV++KNL +S + + + F +G I S V +D +G SKG+GFV+FE
Sbjct: 188 ERDSTANKTKFTNVYVKNLAESTTDDDLKNAFGEYGKITSAVVMKDGEGKSKGFGFVNFE 247
Query: 160 TEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKEL--------GEKAKLF--TNVYIK 209
+ A +++E +NG + K +VG+ + ERE EL E A F +N+Y+K
Sbjct: 248 NADDAARAVESLNGHKFDDKEWYVGRAQKKSERETELRVRYEQNLKEAADKFQSSNLYVK 307
Query: 210 NFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGKSRGFGFVAYESPEFAEKAVQAWNGKEV 268
N +DEKLKE+F P+GT+TS +VM + +G S+G GFVA+ +PE A +A+ +GK +
Sbjct: 308 NLDPSISDEKLKEIFSPFGTVTSSKVMRDPNGTSKGSGFVAFATPEEATEAMSQLSGKMI 367
Query: 269 DGKILYVGRAQKKAERTQELKRRFEMLK 296
+ K LYV AQ+K +R L+ +F ++
Sbjct: 368 ESKPLYVAIAQRKEDRRVRLQAQFSQVR 395
Score = 107 bits (267), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 125/229 (54%), Gaps = 20/229 (8%)
Query: 109 GVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQD-EQGNSKGYGFVHFETEEAANKS 167
G ++++ +LD ++ + ++D F G++++ +V +D S GYG+V+F + A ++
Sbjct: 18 GNTSLYVGDLDFNVTDSQLFDAFGQMGTVVTVRVCRDLVTRRSLGYGYVNFTNPQDAARA 77
Query: 168 IEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPY 227
I+++N + L K + V + R + G N++IKN E + + L + F +
Sbjct: 78 IQELNYIPLYGKPIRV-MYSHRDPSVRRSGAG-----NIFIKNLDESIDHKALHDTFSSF 131
Query: 228 GTITSYRV-MNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQ 286
G I S +V +++ G+S+G+GFV Y + E A+KA++ NG ++ K +YVG ++ ER
Sbjct: 132 GNIVSCKVAVDSSGQSKGYGFVQYANEESAQKAIEKLNGMLLNDKQVYVGPFLRRQERD- 190
Query: 287 ELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSA 335
N+ + N+YVKNL +S D+ L+ F +G ITSA
Sbjct: 191 -----------STANKTKFTNVYVKNLAESTTDDDLKNAFGEYGKITSA 228
>gi|363753804|ref|XP_003647118.1| hypothetical protein Ecym_5562 [Eremothecium cymbalariae
DBVPG#7215]
gi|356890754|gb|AET40301.1| hypothetical protein Ecym_5562 [Eremothecium cymbalariae
DBVPG#7215]
Length = 580
Score = 295 bits (756), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 138/259 (53%), Positives = 193/259 (74%), Gaps = 1/259 (0%)
Query: 79 RALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSIL 138
+A++ +N+ +KG+P RIMWSQRDPSLRK G GN++IKNL +IDNK++++TFS FG+IL
Sbjct: 94 KAIEQLNYTLIKGKPCRIMWSQRDPSLRKKGSGNIYIKNLHPAIDNKSLHETFSTFGNIL 153
Query: 139 SCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGE 198
SCKVA D+ G S+G+GFVHFE E A +IE VNGML+N + V+V + +K+R+ +L E
Sbjct: 154 SCKVATDDNGVSRGFGFVHFENESDARDAIEAVNGMLMNDQEVYVAWHVSKKDRQSKLEE 213
Query: 199 KAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRV-MNNDGKSRGFGFVAYESPEFAE 257
FTN+Y+KN + + E+ +++F YG ITS + +++GK RGFGF+ +E A
Sbjct: 214 VKAKFTNIYVKNIDLETSQEEFEQLFSKYGKITSAVLEKDSEGKLRGFGFINFEDHSTAA 273
Query: 258 KAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSI 317
+AV N + G+ LYVGRAQKK ER QELK+++E ++E+L +YQGVNL++KNLDDSI
Sbjct: 274 RAVDELNESDFRGQTLYVGRAQKKHERQQELKKQYETARLEKLAKYQGVNLFIKNLDDSI 333
Query: 318 DDERLRKEFTPFGTITSAK 336
DDE+L+ EF PFGTITS K
Sbjct: 334 DDEKLKDEFAPFGTITSVK 352
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 77/235 (32%), Positives = 133/235 (56%), Gaps = 17/235 (7%)
Query: 76 DTERALDTMNFDALKGRPIRIMW--SQRDPSLR----KSGVGNVFIKNLDKSIDNKAMYD 129
D A++ +N + + + + W S++D + K+ N+++KN+D +
Sbjct: 178 DARDAIEAVNGMLMNDQEVYVAWHVSKKDRQSKLEEVKAKFTNIYVKNIDLETSQEEFEQ 237
Query: 130 TFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPR 189
FS +G I S + +D +G +G+GF++FE A ++++++N + ++VG+ +
Sbjct: 238 LFSKYGKITSAVLEKDSEGKLRGFGFINFEDHSTAARAVDELNESDFRGQTLYVGRAQKK 297
Query: 190 KEREKELG---EKAKL-------FTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND 239
ER++EL E A+L N++IKN + +DEKLK+ F P+GTITS +VM ++
Sbjct: 298 HERQQELKKQYETARLEKLAKYQGVNLFIKNLDDSIDDEKLKDEFAPFGTITSVKVMKDE 357
Query: 240 -GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFE 293
G SRGFGFV + +PE A KA+ N + V GK LYV AQ+K R +L ++ +
Sbjct: 358 AGSSRGFGFVCFSTPEEATKAITEKNQQLVAGKPLYVAIAQRKEVRRNQLAQQIQ 412
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 80/238 (33%), Positives = 123/238 (51%), Gaps = 25/238 (10%)
Query: 103 PSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGN-SKGYGFVHFETE 161
P + SG ++++ LD S+ +YD FS GS+ S +V +D N S GY +V+F
Sbjct: 31 PKVETSGA-SLYVGELDPSVSEALLYDIFSPIGSVSSIRVCRDAITNTSLGYAYVNFHDH 89
Query: 162 EAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLK 221
EA K+IE++N L+ K I +R+ L +K N+YIKN +++ L
Sbjct: 90 EAGRKAIEQLNYTLIKGKPC----RIMWSQRDPSLRKKGS--GNIYIKNLHPAIDNKSLH 143
Query: 222 EMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
E F +G I S +V +D G SRGFGFV +E+ A A++A NG ++ + +YV
Sbjct: 144 ETFSTFGNILSCKVATDDNGVSRGFGFVHFENESDARDAIEAVNGMLMNDQEVYVAWHVS 203
Query: 281 KAERT---QELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSA 335
K +R +E+K +F N+YVKN+D E + F+ +G ITSA
Sbjct: 204 KKDRQSKLEEVKAKF-------------TNIYVKNIDLETSQEEFEQLFSKYGKITSA 248
>gi|326526505|dbj|BAJ97269.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 663
Score = 295 bits (756), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 151/263 (57%), Positives = 190/263 (72%), Gaps = 4/263 (1%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D RAL+ +NF + G+PIRIM+S RDPS RKSG N+FIKNLDKSIDNKA+YDTFSAFG
Sbjct: 95 DAARALEMLNFTPVNGKPIRIMYSNRDPSSRKSGAANIFIKNLDKSIDNKALYDTFSAFG 154
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCKVA + G SKGYGFV +E +E+A +I ++NGMLLN K V+VG F+ ++ERE
Sbjct: 155 NILSCKVATEMSGESKGYGFVQYEQDESAQNAINELNGMLLNDKKVYVGPFVRKQERENV 214
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMN-NDGKSRGFGFVAYESPE 254
G F NVY+KN E ++ LKE+F +G ITS V+ +DGKSR FGFV +E+P+
Sbjct: 215 FGSPK--FNNVYVKNLSESTTEDNLKELFGNFGPITSVIVVRADDGKSRCFGFVNFENPD 272
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A AV+ NGK+ D K LYVGRAQKK+ER +LK FE E +R QG NLY+KNLD
Sbjct: 273 DAVHAVEDLNGKKFDDKELYVGRAQKKSEREMQLKESFEKSNKETADRNQGTNLYLKNLD 332
Query: 315 DSI-DDERLRKEFTPFGTITSAK 336
S+ DDE+L++ F FGTITS K
Sbjct: 333 GSVDDDEKLKELFAEFGTITSCK 355
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 77/197 (39%), Positives = 117/197 (59%), Gaps = 12/197 (6%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV++KNL +S + + F FG I S V + + G S+ +GFV+FE + A ++E +
Sbjct: 222 NVYVKNLSESTTEDNLKELFGNFGPITSVIVVRADDGKSRCFGFVNFENPDDAVHAVEDL 281
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEK----------AKLFTNVYIKNF-GEDFNDEKL 220
NG + K ++VG+ + ERE +L E TN+Y+KN G +DEKL
Sbjct: 282 NGKKFDDKELYVGRAQKKSEREMQLKESFEKSNKETADRNQGTNLYLKNLDGSVDDDEKL 341
Query: 221 KEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQ 279
KE+F +GTITS +VM +++G ++G GFVA++S E A +A+ A NGK V K LYV AQ
Sbjct: 342 KELFAEFGTITSCKVMRDSNGVNKGSGFVAFKSSEDATRALVAMNGKMVGSKPLYVALAQ 401
Query: 280 KKAERTQELKRRFEMLK 296
+K ER L+ +F ++
Sbjct: 402 RKEERRARLQAQFSQMR 418
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 120/225 (53%), Gaps = 20/225 (8%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGN-SKGYGFVHFETEEAANKSIEK 170
++++ +LD S+ + ++D FS GS++S +V +D S GY +V+F + A +++E
Sbjct: 43 SLYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEM 102
Query: 171 VNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTI 230
+N +N K + + + R ++ G N++IKN + +++ L + F +G I
Sbjct: 103 LNFTPVNGKPIRI-MYSNRDPSSRKSGA-----ANIFIKNLDKSIDNKALYDTFSAFGNI 156
Query: 231 TSYRVMNN-DGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELK 289
S +V G+S+G+GFV YE E A+ A+ NG ++ K +YVG +K ER
Sbjct: 157 LSCKVATEMSGESKGYGFVQYEQDESAQNAINELNGMLLNDKKVYVGPFVRKQERE---- 212
Query: 290 RRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITS 334
+ + N N+YVKNL +S ++ L++ F FG ITS
Sbjct: 213 ---NVFGSPKFN-----NVYVKNLSESTTEDNLKELFGNFGPITS 249
>gi|29336045|ref|NP_444344.1| polyadenylate-binding protein 5 [Mus musculus]
gi|26341316|dbj|BAC34320.1| unnamed protein product [Mus musculus]
gi|76827669|gb|AAI07363.1| Poly(A) binding protein, cytoplasmic 5 [Mus musculus]
gi|76828194|gb|AAI07364.1| Poly(A) binding protein, cytoplasmic 5 [Mus musculus]
gi|148701502|gb|EDL33449.1| poly A binding protein, cytoplasmic 5 [Mus musculus]
Length = 381
Score = 295 bits (756), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 147/266 (55%), Positives = 203/266 (76%), Gaps = 3/266 (1%)
Query: 73 YMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFS 132
+ D E AL+TMNFD + G+P R+MWSQ D LRKSGVGN+FIKNLDK+IDN+A++ FS
Sbjct: 67 FPADAEWALNTMNFDLINGKPFRLMWSQPDDRLRKSGVGNIFIKNLDKTIDNRALFYLFS 126
Query: 133 AFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKER 192
AFG+ILSCKV D+ G SKGY +VHF++ AAN++I +NG+ LN++ V+VG+F +ER
Sbjct: 127 AFGNILSCKVVCDDNG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEER 185
Query: 193 EKELGEKAK-LFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGKSRGFGFVAY 250
E+ + + FTNV++KNFG+D +DEKL ++F YG S +V+ + GKS+GFGFV Y
Sbjct: 186 AAEVRTRERATFTNVFVKNFGDDIDDEKLNKLFSEYGPTESVKVIRDATGKSKGFGFVRY 245
Query: 251 ESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYV 310
E+ E A+KAV +GK +DGK+L VGRAQKK ER EL+RRFE LK++ NR GV +Y+
Sbjct: 246 ETHEAAQKAVLELHGKSIDGKVLCVGRAQKKIERLAELRRRFERLKLKEKNRPSGVPIYI 305
Query: 311 KNLDDSIDDERLRKEFTPFGTITSAK 336
KNLD++I+DE+L++EF+ FG+I+ AK
Sbjct: 306 KNLDETINDEKLKEEFSSFGSISRAK 331
Score = 120 bits (301), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 72/180 (40%), Positives = 104/180 (57%), Gaps = 10/180 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NVF+KN ID++ + FS +G S KV +D G SKG+GFV +ET EAA K++ ++
Sbjct: 199 NVFVKNFGDDIDDEKLNKLFSEYGPTESVKVIRDATGKSKGFGFVRYETHEAAQKAVLEL 258
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELG---EKAKL-------FTNVYIKNFGEDFNDEKLK 221
+G ++ K++ VG+ + ER EL E+ KL +YIKN E NDEKLK
Sbjct: 259 HGKSIDGKVLCVGRAQKKIERLAELRRRFERLKLKEKNRPSGVPIYIKNLDETINDEKLK 318
Query: 222 EMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKK 281
E F +G+I+ +VM G+ +GFG V + S E A KAV NG+ + K L+V Q +
Sbjct: 319 EEFSSFGSISRAKVMMEVGQGKGFGVVCFSSFEEACKAVDEMNGRIIGSKTLHVTLGQAR 378
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 110/223 (49%), Gaps = 16/223 (7%)
Query: 115 IKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSK-GYGFVHFETEEAANKSIEKVNG 173
+ +LD + +Y F G + ++ +D S GYG+V+F A ++ +N
Sbjct: 21 VGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTMNF 80
Query: 174 MLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSY 233
L+N K + P +R ++ G N++IKN + ++ L +F +G I S
Sbjct: 81 DLINGKPFRLMWSQP-DDRLRKSG-----VGNIFIKNLDKTIDNRALFYLFSAFGNILSC 134
Query: 234 RVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFE 293
+V+ +D S+G+ +V ++S A +A+ NG ++ + +YVGR + ER E++ R
Sbjct: 135 KVVCDDNGSKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEERAAEVRTR-- 192
Query: 294 MLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
R N++VKN D IDDE+L K F+ +G S K
Sbjct: 193 -------ERATFTNVFVKNFGDDIDDEKLNKLFSEYGPTESVK 228
>gi|326492626|dbj|BAJ90169.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326511122|dbj|BAJ87575.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 663
Score = 295 bits (756), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 151/263 (57%), Positives = 190/263 (72%), Gaps = 4/263 (1%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D RAL+ +NF + G+PIRIM+S RDPS RKSG N+FIKNLDKSIDNKA+YDTFSAFG
Sbjct: 95 DAARALEMLNFTPVNGKPIRIMYSNRDPSSRKSGAANIFIKNLDKSIDNKALYDTFSAFG 154
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCKVA + G SKGYGFV +E +E+A +I ++NGMLLN K V+VG F+ ++ERE
Sbjct: 155 NILSCKVATEMSGESKGYGFVQYEQDESAQNAINELNGMLLNDKKVYVGPFVRKQERENV 214
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMN-NDGKSRGFGFVAYESPE 254
G F NVY+KN E ++ LKE+F +G ITS V+ +DGKSR FGFV +E+P+
Sbjct: 215 FGSPK--FNNVYVKNLSESTTEDNLKELFGNFGPITSVIVVRADDGKSRCFGFVNFENPD 272
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A AV+ NGK+ D K LYVGRAQKK+ER +LK FE E +R QG NLY+KNLD
Sbjct: 273 DAVHAVEDLNGKKFDDKELYVGRAQKKSEREMQLKESFEKSNKETADRNQGTNLYLKNLD 332
Query: 315 DSI-DDERLRKEFTPFGTITSAK 336
S+ DDE+L++ F FGTITS K
Sbjct: 333 GSVDDDEKLKELFAEFGTITSCK 355
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 77/197 (39%), Positives = 117/197 (59%), Gaps = 12/197 (6%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV++KNL +S + + F FG I S V + + G S+ +GFV+FE + A ++E +
Sbjct: 222 NVYVKNLSESTTEDNLKELFGNFGPITSVIVVRADDGKSRCFGFVNFENPDDAVHAVEDL 281
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEK----------AKLFTNVYIKNF-GEDFNDEKL 220
NG + K ++VG+ + ERE +L E TN+Y+KN G +DEKL
Sbjct: 282 NGKKFDDKELYVGRAQKKSEREMQLKESFEKSNKETADRNQGTNLYLKNLDGSVDDDEKL 341
Query: 221 KEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQ 279
KE+F +GTITS +VM +++G ++G GFVA++S E A +A+ A NGK V K LYV AQ
Sbjct: 342 KELFAEFGTITSCKVMRDSNGVNKGSGFVAFKSSEDATRALVAMNGKMVGSKPLYVALAQ 401
Query: 280 KKAERTQELKRRFEMLK 296
+K ER L+ +F ++
Sbjct: 402 RKEERRARLQAQFSQMR 418
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 119/224 (53%), Gaps = 20/224 (8%)
Query: 113 VFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGN-SKGYGFVHFETEEAANKSIEKV 171
+++ +LD S+ + ++D FS GS++S +V +D S GY +V+F + A +++E +
Sbjct: 44 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALEML 103
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTIT 231
N +N K + + + R ++ G N++IKN + +++ L + F +G I
Sbjct: 104 NFTPVNGKPIRI-MYSNRDPSSRKSGA-----ANIFIKNLDKSIDNKALYDTFSAFGNIL 157
Query: 232 SYRVMNN-DGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKR 290
S +V G+S+G+GFV YE E A+ A+ NG ++ K +YVG +K ER
Sbjct: 158 SCKVATEMSGESKGYGFVQYEQDESAQNAINELNGMLLNDKKVYVGPFVRKQERE----- 212
Query: 291 RFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITS 334
+ + N N+YVKNL +S ++ L++ F FG ITS
Sbjct: 213 --NVFGSPKFN-----NVYVKNLSESTTEDNLKELFGNFGPITS 249
>gi|366987097|ref|XP_003673315.1| hypothetical protein NCAS_0A03680 [Naumovozyma castellii CBS 4309]
gi|342299178|emb|CCC66926.1| hypothetical protein NCAS_0A03680 [Naumovozyma castellii CBS 4309]
Length = 575
Score = 295 bits (756), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 140/259 (54%), Positives = 190/259 (73%), Gaps = 1/259 (0%)
Query: 79 RALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSIL 138
+A++ +N+ +KGR RIMWSQRDP+LRK G GN+FIKNL IDNKA+++TFS FG+IL
Sbjct: 91 KAIEQLNYTPIKGRLCRIMWSQRDPALRKKGSGNIFIKNLHPDIDNKALFETFSVFGNIL 150
Query: 139 SCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGE 198
S K+A DE G SKG+GFVHFE E +A ++I+ +NGMLLN + ++V + RKER+ +L E
Sbjct: 151 SSKIATDETGKSKGFGFVHFEHESSAKEAIDALNGMLLNGQEIYVAPHLTRKERDSQLEE 210
Query: 199 KAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRV-MNNDGKSRGFGFVAYESPEFAE 257
FTNVY+KN + DE+ E+F YG + S + DGK +GFGFV +E E A
Sbjct: 211 TKAHFTNVYVKNINLETTDEEFNELFAKYGNVLSSSLEKTEDGKLKGFGFVDFEKHEDAA 270
Query: 258 KAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSI 317
KAV+ NG E + L+V RAQKK ER QELK+++E ++E++ +YQGVNL+VKNLDDSI
Sbjct: 271 KAVEELNGTEFKDQTLFVSRAQKKYERMQELKKQYEASRLEKMAKYQGVNLFVKNLDDSI 330
Query: 318 DDERLRKEFTPFGTITSAK 336
DDE+L++EF P+GTITS +
Sbjct: 331 DDEKLKEEFAPYGTITSVR 349
Score = 141 bits (356), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 87/231 (37%), Positives = 133/231 (57%), Gaps = 17/231 (7%)
Query: 80 ALDTMNFDALKGRPI----RIMWSQRDPSLR--KSGVGNVFIKNLDKSIDNKAMYDTFSA 133
A+D +N L G+ I + +RD L K+ NV++KN++ ++ + F+
Sbjct: 179 AIDALNGMLLNGQEIYVAPHLTRKERDSQLEETKAHFTNVYVKNINLETTDEEFNELFAK 238
Query: 134 FGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKERE 193
+G++LS + + E G KG+GFV FE E A K++E++NG + +FV + + ER
Sbjct: 239 YGNVLSSSLEKTEDGKLKGFGFVDFEKHEDAAKAVEELNGTEFKDQTLFVSRAQKKYERM 298
Query: 194 KELG---EKAKL-------FTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GKS 242
+EL E ++L N+++KN + +DEKLKE F PYGTITS RVM D GKS
Sbjct: 299 QELKKQYEASRLEKMAKYQGVNLFVKNLDDSIDDEKLKEEFAPYGTITSVRVMRTDNGKS 358
Query: 243 RGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFE 293
+GFGFV + +PE A KA+ N + V GK LYV AQ+K R +L ++ +
Sbjct: 359 KGFGFVCFSTPEEATKAITEKNQQIVAGKPLYVAIAQRKDVRRSQLAQQIQ 409
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 118/227 (51%), Gaps = 18/227 (7%)
Query: 111 GNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSIE 169
++++ LD ++ +YD FS GS+ S +V +D S GY +V+F EA K+IE
Sbjct: 35 ASLYVGELDPTVSEALLYDIFSPIGSVSSIRVCRDAVTKTSLGYAYVNFNDHEAGKKAIE 94
Query: 170 KVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGT 229
++N + ++ I +R+ L +K N++IKN D +++ L E F +G
Sbjct: 95 QLNYTPIKGRLC----RIMWSQRDPALRKKGS--GNIFIKNLHPDIDNKALFETFSVFGN 148
Query: 230 ITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S ++ ++ GKS+GFGFV +E A++A+ A NG ++G+ +YV + ER +L
Sbjct: 149 ILSSKIATDETGKSKGFGFVHFEHESSAKEAIDALNGMLLNGQEIYVAPHLTRKERDSQL 208
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSA 335
+ + N+YVKN++ DE + F +G + S+
Sbjct: 209 EE----------TKAHFTNVYVKNINLETTDEEFNELFAKYGNVLSS 245
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 58/95 (61%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
N+F+KNLD SID++ + + F+ +G+I S +V + + G SKG+GFV F T E A K+I +
Sbjct: 320 NLFVKNLDDSIDDEKLKEEFAPYGTITSVRVMRTDNGKSKGFGFVCFSTPEEATKAITEK 379
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNV 206
N ++ K ++V + R +L ++ + T +
Sbjct: 380 NQQIVAGKPLYVAIAQRKDVRRSQLAQQIQARTQM 414
>gi|71018821|ref|XP_759641.1| hypothetical protein UM03494.1 [Ustilago maydis 521]
gi|74701642|sp|Q4P8R9.1|PABP_USTMA RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|46099399|gb|EAK84632.1| hypothetical protein UM03494.1 [Ustilago maydis 521]
Length = 651
Score = 295 bits (756), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 146/262 (55%), Positives = 195/262 (74%), Gaps = 2/262 (0%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D ERA++ +N+ ++ RP RIMWSQRDP+LR++G GN+FIKNLD IDNKA++DTF+AFG
Sbjct: 100 DGERAMEQLNYSLIRNRPCRIMWSQRDPALRRTGQGNIFIKNLDAGIDNKALHDTFAAFG 159
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCKVA +E G S GYGFVH+ET EAA +I+ VNGMLLN K V+VG IPRKER+ +
Sbjct: 160 NILSCKVATNETG-SLGYGFVHYETAEAAEAAIKHVNGMLLNDKKVYVGHHIPRKERQAK 218
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGKSRGFGFVAYESPE 254
+ E FTNVY KN + D++ +++F +G ITS + + DGKS+GFGFV +E
Sbjct: 219 IEETRANFTNVYAKNVDPEVTDDEFEKLFTKFGKITSCVLQRDEDGKSKGFGFVNFEDHN 278
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A+KAV + + G+ L+V RAQKK+ER +EL+R +E K E+L ++QGVNLY+KN+
Sbjct: 279 EAQKAVDELHDSDFKGQKLFVARAQKKSEREEELRRSYEAAKNEKLAKFQGVNLYLKNIP 338
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
+S DDERLR+EF PFG ITS K
Sbjct: 339 ESYDDERLREEFAPFGAITSCK 360
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 78/189 (41%), Positives = 113/189 (59%), Gaps = 11/189 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV+ KN+D + + F+ FG I SC + +DE G SKG+GFV+FE A K+++++
Sbjct: 228 NVYAKNVDPEVTDDEFEKLFTKFGKITSCVLQRDEDGKSKGFGFVNFEDHNEAQKAVDEL 287
Query: 172 NGMLLNSKIVFVGKFIPRKEREKEL--------GEKAKLF--TNVYIKNFGEDFNDEKLK 221
+ + +FV + + ERE+EL EK F N+Y+KN E ++DE+L+
Sbjct: 288 HDSDFKGQKLFVARAQKKSEREEELRRSYEAAKNEKLAKFQGVNLYLKNIPESYDDERLR 347
Query: 222 EMFEPYGTITSYRVMN-NDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
E F P+G ITS ++M G SRGFGFV Y +PE A KAV NGK +D + LYV AQ+
Sbjct: 348 EEFAPFGAITSCKIMRAPSGVSRGFGFVCYSAPEEANKAVSEMNGKMLDNRPLYVALAQR 407
Query: 281 KAERTQELK 289
K R Q+L+
Sbjct: 408 KDVRRQQLE 416
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 114/225 (50%), Gaps = 17/225 (7%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSIEK 170
++++ LD S+ +++ FS G++ S +V +D S GY +V+F +++E+
Sbjct: 48 SLYVGELDPSVTEAMLFEIFSMIGTVASIRVCRDAVTRRSLGYAYVNFLNAADGERAMEQ 107
Query: 171 VNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTI 230
+N L+ ++ I +R+ L + N++IKN +++ L + F +G I
Sbjct: 108 LNYSLIRNRPC----RIMWSQRDPALRRTGQ--GNIFIKNLDAGIDNKALHDTFAAFGNI 161
Query: 231 TSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKR 290
S +V N+ S G+GFV YE+ E AE A++ NG ++ K +YVG + R
Sbjct: 162 LSCKVATNETGSLGYGFVHYETAEAAEAAIKHVNGMLLNDKKVYVG---------HHIPR 212
Query: 291 RFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSA 335
+ KIE R N+Y KN+D + D+ K FT FG ITS
Sbjct: 213 KERQAKIEE-TRANFTNVYAKNVDPEVTDDEFEKLFTKFGKITSC 256
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 75/125 (60%), Gaps = 18/125 (14%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQ----RDPSLRKS-------------GVGNVFIKNL 118
+ ++A+D ++ KG+ + + +Q R+ LR+S GV N+++KN+
Sbjct: 279 EAQKAVDELHDSDFKGQKLFVARAQKKSEREEELRRSYEAAKNEKLAKFQGV-NLYLKNI 337
Query: 119 DKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNS 178
+S D++ + + F+ FG+I SCK+ + G S+G+GFV + E ANK++ ++NG +L++
Sbjct: 338 PESYDDERLREEFAPFGAITSCKIMRAPSGVSRGFGFVCYSAPEEANKAVSEMNGKMLDN 397
Query: 179 KIVFV 183
+ ++V
Sbjct: 398 RPLYV 402
Score = 42.4 bits (98), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 58/135 (42%), Gaps = 18/135 (13%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQ 261
T++Y+ + L E+F GT+ S RV + +S G+ +V + + E+A++
Sbjct: 47 TSLYVGELDPSVTEAMLFEIFSMIGTVASIRVCRDAVTRRSLGYAYVNFLNAADGERAME 106
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDER 321
N + + + +Q+ L R N+++KNLD ID++
Sbjct: 107 QLNYSLIRNRPCRIMWSQRDPA----------------LRRTGQGNIFIKNLDAGIDNKA 150
Query: 322 LRKEFTPFGTITSAK 336
L F FG I S K
Sbjct: 151 LHDTFAAFGNILSCK 165
>gi|449446375|ref|XP_004140947.1| PREDICTED: polyadenylate-binding protein 3-like [Cucumis sativus]
Length = 652
Score = 295 bits (755), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 150/263 (57%), Positives = 192/263 (73%), Gaps = 5/263 (1%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D A++ +NF + G+PIRIM S RDPS+RKSG NVFIKNLD SIDNKA+ DTF+AFG
Sbjct: 88 DAVNAMEHLNFTPVNGKPIRIMISNRDPSIRKSGYANVFIKNLDLSIDNKALRDTFAAFG 147
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
++LSCKVA D G SKGYGFV FE+EE+A SIEK+NGMLLN K V+VG FI +ER +
Sbjct: 148 TVLSCKVAVDSNGQSKGYGFVQFESEESAEISIEKLNGMLLNDKQVYVGHFIRHQERIRA 207
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPE 254
G + FTNVY+KN E D+ LK +F P+GTITS VM +++GKS+ FGFV +++ +
Sbjct: 208 NGSQ---FTNVYVKNLPETTTDDDLKNLFAPHGTITSAIVMTDSNGKSKCFGFVNFQNTD 264
Query: 255 FAEKAVQAWNGKEV-DGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNL 313
A AV+ +G + D K LYVGRAQ+KAER ELK +FE + R + QG NLY+KNL
Sbjct: 265 SAAAAVEKLDGTVLGDDKTLYVGRAQRKAEREAELKAKFEQERKSRFEKLQGANLYIKNL 324
Query: 314 DDSIDDERLRKEFTPFGTITSAK 336
DD IDDE+L++ F+ +GTITS K
Sbjct: 325 DDHIDDEKLKELFSEYGTITSCK 347
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 79/197 (40%), Positives = 119/197 (60%), Gaps = 12/197 (6%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV++KNL ++ + + + F+ G+I S V D G SK +GFV+F+ ++A ++EK+
Sbjct: 214 NVYVKNLPETTTDDDLKNLFAPHGTITSAIVMTDSNGKSKCFGFVNFQNTDSAAAAVEKL 273
Query: 172 NGMLL-NSKIVFVGKFIPRKEREKEL-----GEKAKLF-----TNVYIKNFGEDFNDEKL 220
+G +L + K ++VG+ + ERE EL E+ F N+YIKN + +DEKL
Sbjct: 274 DGTVLGDDKTLYVGRAQRKAEREAELKAKFEQERKSRFEKLQGANLYIKNLDDHIDDEKL 333
Query: 221 KEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQ 279
KE+F YGTITS +VM + G S+G GFVA+ SP+ A KA+ NGK K LYV AQ
Sbjct: 334 KELFSEYGTITSCKVMLDQHGLSKGSGFVAFSSPDEATKALNEMNGKMKGRKPLYVAVAQ 393
Query: 280 KKAERTQELKRRFEMLK 296
+K ER L+ +F ++
Sbjct: 394 RKEERKARLQAQFAQIR 410
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 126/226 (55%), Gaps = 21/226 (9%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSIEK 170
++++ +LD+S++ + + F ++S +V +D+ + S GY +V+F + + A ++E
Sbjct: 36 SLYVGDLDQSVNEGQLLELFGQVAQVVSIRVCRDQTRRQSLGYAYVNFSSHQDAVNAMEH 95
Query: 171 VNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTI 230
+N +N K + I R+ + + + NV+IKN +++ L++ F +GT+
Sbjct: 96 LNFTPVNGKPI----RIMISNRDPSIRKSG--YANVFIKNLDLSIDNKALRDTFAAFGTV 149
Query: 231 TSYRV-MNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELK 289
S +V ++++G+S+G+GFV +ES E AE +++ NG ++ K +YVG + ER
Sbjct: 150 LSCKVAVDSNGQSKGYGFVQFESEESAEISIEKLNGMLLNDKQVYVGHFIRHQERI---- 205
Query: 290 RRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSA 335
R N Q N+YVKNL ++ D+ L+ F P GTITSA
Sbjct: 206 ---------RANGSQFTNVYVKNLPETTTDDDLKNLFAPHGTITSA 242
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 66/137 (48%), Gaps = 18/137 (13%)
Query: 202 LFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDGK--SRGFGFVAYESPEFAEKA 259
L +++Y+ + + N+ +L E+F + S RV + + S G+ +V + S + A A
Sbjct: 33 LSSSLYVGDLDQSVNEGQLLELFGQVAQVVSIRVCRDQTRRQSLGYAYVNFSSHQDAVNA 92
Query: 260 VQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDD 319
++ N V+GK + + + + + + N+++KNLD SID+
Sbjct: 93 MEHLNFTPVNGKPIRIMISNRDPS----------------IRKSGYANVFIKNLDLSIDN 136
Query: 320 ERLRKEFTPFGTITSAK 336
+ LR F FGT+ S K
Sbjct: 137 KALRDTFAAFGTVLSCK 153
>gi|401409876|ref|XP_003884386.1| hypothetical protein NCLIV_047860 [Neospora caninum Liverpool]
gi|325118804|emb|CBZ54355.1| hypothetical protein NCLIV_047860 [Neospora caninum Liverpool]
Length = 763
Score = 295 bits (754), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 153/287 (53%), Positives = 195/287 (67%), Gaps = 30/287 (10%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D ER+LDT+N+ +KG+P RIMW RDPSLRKSG GN+F+KNLDK+IDNKA+YDTFS FG
Sbjct: 137 DAERSLDTLNYTVIKGQPCRIMWCHRDPSLRKSGNGNIFVKNLDKNIDNKALYDTFSLFG 196
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCKVA DE G+SKGYGFVH+E EE+A +I+KVNGML+ K V+VG FI R ER+
Sbjct: 197 NILSCKVAVDENGHSKGYGFVHYENEESARSAIDKVNGMLIGGKTVYVGPFIRRAERDN- 255
Query: 196 LGEKAKLFTNVYIKNFGEDFNDE-KLKEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPE 254
L E +TNVYIKN + DE +L+E F YG+ITS V+ D K R F F + +
Sbjct: 256 LAETK--YTNVYIKNMPSAWEDEARLRETFAKYGSITSL-VVRKDPKGRLFAFCNFADHD 312
Query: 255 FAEKAVQAWNGKEVDG-------------------------KILYVGRAQKKAERTQELK 289
A+ AV+A NGK V +IL+VG Q KA R+ L+
Sbjct: 313 SAKAAVEALNGKRVTDAGAIKEGEDSGAEEKDEEGQKREGEQILFVGPHQSKAHRSAMLR 372
Query: 290 RRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+FE + +R +R+QGVNLY+KN+DDSIDDE+LR+ F PFG+ITSAK
Sbjct: 373 AKFEQMNQDRNDRFQGVNLYIKNMDDSIDDEKLRQLFEPFGSITSAK 419
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 81/259 (31%), Positives = 137/259 (52%), Gaps = 44/259 (16%)
Query: 80 ALDTMNFDALKGRPIR----IMWSQRDPSLRKSGVGNVFIKNLDKSIDNKA-MYDTFSAF 134
A+D +N + G+ + I ++RD +L ++ NV+IKN+ + +++A + +TF+ +
Sbjct: 228 AIDKVNGMLIGGKTVYVGPFIRRAERD-NLAETKYTNVYIKNMPSAWEDEARLRETFAKY 286
Query: 135 GSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNS---------------- 178
GSI S V +D +G + + F +F ++A ++E +NG +
Sbjct: 287 GSITSLVVRKDPKG--RLFAFCNFADHDSAKAAVEALNGKRVTDAGAIKEGEDSGAEEKD 344
Query: 179 ---------KIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEK 219
+I+FVG + R L K + N+YIKN + +DEK
Sbjct: 345 EEGQKREGEQILFVGPHQSKAHRSAMLRAKFEQMNQDRNDRFQGVNLYIKNMDDSIDDEK 404
Query: 220 LKEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRA 278
L+++FEP+G+ITS +VM ++ G SR FGFV + SPE A KAV + K V GK LYVG A
Sbjct: 405 LRQLFEPFGSITSAKVMRDERGVSRCFGFVCFMSPEEATKAVTEMHLKLVKGKPLYVGLA 464
Query: 279 QKKAERTQELKRRFEMLKI 297
+++ +R L++RF + +
Sbjct: 465 ERREQRLMRLQQRFRLPSL 483
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 69/159 (43%), Gaps = 22/159 (13%)
Query: 184 GKFIPRKEREKELGEKAK----LFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN- 238
G P +R L A + ++Y+ + +D + L E+F G +TS RV +
Sbjct: 60 GTAPPAGQRPNGLNAAASAANFVSPSLYVGDLHQDVTEAMLFEVFNSVGPVTSIRVCRDT 119
Query: 239 -DGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKI 297
+S G+ +V Y+ + AE+++ N + G+ + +
Sbjct: 120 VTRRSLGYAYVNYQGIQDAERSLDTLNYTVIKGQPCRIMWCHRDPS-------------- 165
Query: 298 ERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
L + N++VKNLD +ID++ L F+ FG I S K
Sbjct: 166 --LRKSGNGNIFVKNLDKNIDNKALYDTFSLFGNILSCK 202
>gi|145349140|ref|XP_001418998.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144579228|gb|ABO97291.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 572
Score = 295 bits (754), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 146/262 (55%), Positives = 187/262 (71%), Gaps = 4/262 (1%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D A+D +NF + G+PIR+++SQRDP++R+SGVGN+FIKNLDK+IDNKA+ DTF+ FG
Sbjct: 90 DAAHAIDVLNFQVINGKPIRVLYSQRDPAVRRSGVGNIFIKNLDKAIDNKALLDTFAQFG 149
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+I S KVA D QGNSKGYGFV FET+EAA +I+ VNGM LN K V+VG F R ER
Sbjct: 150 TITSAKVAMDGQGNSKGYGFVQFETQEAAQAAIDNVNGMELNDKQVYVGPFQRRAERSN- 208
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPE 254
GE F NVY+KN E+ +DEKL+E F +G +TS +M + +GKS+GFGFV YE PE
Sbjct: 209 TGEAK--FNNVYVKNLSENLSDEKLREKFAEHGAVTSCVIMRDEEGKSKGFGFVCYEEPE 266
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A AV+ +G D K V RAQKKAER ELK +F+ + ER+ + G NLY+KNL+
Sbjct: 267 GAAAAVEKLDGYTEDEKTWVVCRAQKKAEREAELKAKFDQERRERMEKMAGANLYIKNLE 326
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
D DDE+LR+ F FGTITS +
Sbjct: 327 DGTDDEKLRELFKEFGTITSCR 348
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 87/232 (37%), Positives = 132/232 (56%), Gaps = 18/232 (7%)
Query: 77 TERALDTMNFDALKGRPIRIMWSQRDPSLRKSG---VGNVFIKNLDKSIDNKAMYDTFSA 133
+ A+D +N L + + + QR +G NV++KNL +++ ++ + + F+
Sbjct: 178 AQAAIDNVNGMELNDKQVYVGPFQRRAERSNTGEAKFNNVYVKNLSENLSDEKLREKFAE 237
Query: 134 FGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKERE 193
G++ SC + +DE+G SKG+GFV +E E A ++EK++G + K V + + ERE
Sbjct: 238 HGAVTSCVIMRDEEGKSKGFGFVCYEEPEGAAAAVEKLDGYTEDEKTWVVCRAQKKAERE 297
Query: 194 KELGEKAKL------------FTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DG 240
EL KAK N+YIKN + +DEKL+E+F+ +GTITS RVM + G
Sbjct: 298 AEL--KAKFDQERRERMEKMAGANLYIKNLEDGTDDEKLRELFKEFGTITSCRVMRDASG 355
Query: 241 KSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRF 292
SRG FVA+ SP+ A +AV NGK V K LYV AQ+K ER L+ +F
Sbjct: 356 VSRGSAFVAFSSPDEATRAVTEMNGKMVGAKPLYVALAQRKEERRMRLQAQF 407
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 74/237 (31%), Positives = 135/237 (56%), Gaps = 23/237 (9%)
Query: 103 PSLRKSGVG--NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFE 159
P+ ++ G G ++++ +L+ S+ +Y+ FS+ G ++S +V +D S GY +V+F+
Sbjct: 27 PAAQQPGAGTSSLYVGDLETSVTEAQLYEKFSSIGPVVSIRVCRDLITRRSLGYAYVNFQ 86
Query: 160 TEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEK 219
+ A +I+ +N ++N K + V + R + G N++IKN + +++
Sbjct: 87 SPNDAAHAIDVLNFQVINGKPIRV-LYSQRDPAVRRSG-----VGNIFIKNLDKAIDNKA 140
Query: 220 LKEMFEPYGTITSYRV-MNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRA 278
L + F +GTITS +V M+ G S+G+GFV +E+ E A+ A+ NG E++ K +YVG
Sbjct: 141 LLDTFAQFGTITSAKVAMDGQGNSKGYGFVQFETQEAAQAAIDNVNGMELNDKQVYVGPF 200
Query: 279 QKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSA 335
Q++AER+ + +F N+YVKNL +++ DE+LR++F G +TS
Sbjct: 201 QRRAERSNTGEAKFN-------------NVYVKNLSENLSDEKLREKFAEHGAVTSC 244
>gi|50306049|ref|XP_452986.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|74690315|sp|Q6CSV3.1|PABP_KLULA RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|49642119|emb|CAH01837.1| KLLA0C17600p [Kluyveromyces lactis]
Length = 592
Score = 295 bits (754), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 137/259 (52%), Positives = 191/259 (73%), Gaps = 1/259 (0%)
Query: 79 RALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSIL 138
+A+ +N+ + GRP RIMWS+RDP++RK G GN+FIKNL +IDNKA+++TFS FG +L
Sbjct: 106 KAIQELNYAEINGRPCRIMWSERDPAIRKKGSGNIFIKNLHPAIDNKALHETFSTFGEVL 165
Query: 139 SCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGE 198
SCKVA DE GNS+G+GFVHF+ E A +IE VNGML+N V+V +P+K+R +L E
Sbjct: 166 SCKVALDENGNSRGFGFVHFKEESDAKDAIEAVNGMLMNGLEVYVAMHVPKKDRISKLEE 225
Query: 199 KAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGKSRGFGFVAYESPEFAE 257
FTN+Y+KN + DE+ +++F YG I S + + +GK +GFGFV + A
Sbjct: 226 AKANFTNIYVKNIDVETTDEEFEQLFSQYGEIVSAALEKDAEGKPKGFGFVNFVDHNAAA 285
Query: 258 KAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSI 317
KAV+ NGKE + LYVGRAQKK ER +ELK+++E ++E+L ++QGVNL++KNLDDSI
Sbjct: 286 KAVEELNGKEFKSQALYVGRAQKKYERAEELKKQYEQYRLEKLAKFQGVNLFIKNLDDSI 345
Query: 318 DDERLRKEFTPFGTITSAK 336
DDE+L++EF P+GTITSA+
Sbjct: 346 DDEKLKEEFAPYGTITSAR 364
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 77/198 (38%), Positives = 120/198 (60%), Gaps = 11/198 (5%)
Query: 107 KSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANK 166
K+ N+++KN+D ++ FS +G I+S + +D +G KG+GFV+F AA K
Sbjct: 227 KANFTNIYVKNIDVETTDEEFEQLFSQYGEIVSAALEKDAEGKPKGFGFVNFVDHNAAAK 286
Query: 167 SIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFN 216
++E++NG S+ ++VG+ + ER +EL ++ + + N++IKN + +
Sbjct: 287 AVEELNGKEFKSQALYVGRAQKKYERAEELKKQYEQYRLEKLAKFQGVNLFIKNLDDSID 346
Query: 217 DEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYV 275
DEKLKE F PYGTITS RVM + +G S+GFGFV + SPE A KA+ N + V GK LYV
Sbjct: 347 DEKLKEEFAPYGTITSARVMRDQEGNSKGFGFVCFSSPEEATKAMTEKNQQIVAGKPLYV 406
Query: 276 GRAQKKAERTQELKRRFE 293
AQ+K R +L ++ +
Sbjct: 407 AIAQRKDVRRSQLAQQIQ 424
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 65/135 (48%), Gaps = 18/135 (13%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQ 261
++Y+ + + L ++F P G I+S RV + S G+ +V Y E +KA+Q
Sbjct: 50 ASLYVGELDPNITEALLYDVFSPLGPISSIRVCRDAVTKASLGYAYVNYTDYEAGKKAIQ 109
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDER 321
N E++G+ + +ER ++++ N+++KNL +ID++
Sbjct: 110 ELNYAEINGRPCRI----MWSERDPAIRKK------------GSGNIFIKNLHPAIDNKA 153
Query: 322 LRKEFTPFGTITSAK 336
L + F+ FG + S K
Sbjct: 154 LHETFSTFGEVLSCK 168
>gi|160333518|ref|NP_001103836.1| poly A binding protein, cytoplasmic 5 [Rattus norvegicus]
gi|149055477|gb|EDM07061.1| rCG38154 [Rattus norvegicus]
Length = 382
Score = 295 bits (754), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 148/266 (55%), Positives = 203/266 (76%), Gaps = 3/266 (1%)
Query: 73 YMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFS 132
+ D E AL+TMNFD + G+P R+MWSQ D LRKSGVGN+FIKNLDKSIDN+A++ FS
Sbjct: 68 FPADAEWALNTMNFDLINGKPFRLMWSQPDDHLRKSGVGNIFIKNLDKSIDNRALFYLFS 127
Query: 133 AFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKER 192
AFG+ILSCKV D+ G SKGY +VHF++ AAN++I +NG+ LN++ V+VG+F +ER
Sbjct: 128 AFGNILSCKVVCDDNG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEER 186
Query: 193 EKELGEKAK-LFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGKSRGFGFVAY 250
E+ + + FTNV++KNFG+D +DEKLK++F YG S +V+ + GKS+GFGFV Y
Sbjct: 187 AAEVRTRDRATFTNVFVKNFGDDIDDEKLKKLFSEYGPTESVKVIRDATGKSKGFGFVRY 246
Query: 251 ESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYV 310
E+ E A+KAV +GK +DGK+L VGRAQKK ER EL+RRFE LK++ R GV +Y+
Sbjct: 247 ETHEAAQKAVLELHGKSIDGKVLCVGRAQKKIERLAELRRRFERLKLKDKTRPPGVPIYI 306
Query: 311 KNLDDSIDDERLRKEFTPFGTITSAK 336
KNLD++I+DE+L++EF+ FG+I+ AK
Sbjct: 307 KNLDETINDEKLKEEFSLFGSISRAK 332
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 104/180 (57%), Gaps = 10/180 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NVF+KN ID++ + FS +G S KV +D G SKG+GFV +ET EAA K++ ++
Sbjct: 200 NVFVKNFGDDIDDEKLKKLFSEYGPTESVKVIRDATGKSKGFGFVRYETHEAAQKAVLEL 259
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELG---EKAKL-------FTNVYIKNFGEDFNDEKLK 221
+G ++ K++ VG+ + ER EL E+ KL +YIKN E NDEKLK
Sbjct: 260 HGKSIDGKVLCVGRAQKKIERLAELRRRFERLKLKDKTRPPGVPIYIKNLDETINDEKLK 319
Query: 222 EMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKK 281
E F +G+I+ +VM G+ +GFG V + S E A KAV NG+ V K L+V Q +
Sbjct: 320 EEFSLFGSISRAKVMMEVGQGKGFGVVCFSSFEEASKAVNEMNGRVVGSKTLHVTLGQAR 379
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 111/224 (49%), Gaps = 18/224 (8%)
Query: 115 IKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSK-GYGFVHFETEEAANKSIEKVNG 173
+ +LD + +Y F G + ++ +D S GYG+V+F A ++ +N
Sbjct: 22 VGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTMNF 81
Query: 174 MLLNSKIVFVGKFIPRKE-REKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITS 232
L+N K + P R+ +G N++IKN + ++ L +F +G I S
Sbjct: 82 DLINGKPFRLMWSQPDDHLRKSGVG-------NIFIKNLDKSIDNRALFYLFSAFGNILS 134
Query: 233 YRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRF 292
+V+ +D S+G+ +V ++S A +A+ NG ++ + +YVGR + ER E++ R
Sbjct: 135 CKVVCDDNGSKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEERAAEVRTR- 193
Query: 293 EMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+R N++VKN D IDDE+L+K F+ +G S K
Sbjct: 194 --------DRATFTNVFVKNFGDDIDDEKLKKLFSEYGPTESVK 229
>gi|356510461|ref|XP_003523956.1| PREDICTED: polyadenylate-binding protein 2-like [Glycine max]
gi|83853808|gb|ABC47841.1| poly(A)-binding protein [Glycine max]
Length = 630
Score = 295 bits (754), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 149/263 (56%), Positives = 192/263 (73%), Gaps = 5/263 (1%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D +A+D +NF L G+ IRIM+S RDPS RKSG NVFIKNLDK+ID+KA+YDTFSAFG
Sbjct: 77 DAAKAIDVLNFTPLNGKIIRIMYSIRDPSARKSGAANVFIKNLDKAIDHKALYDTFSAFG 136
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCKVA D G SKG+GFV FE+EE+A +I+K+NGML+N K VFVG F+ +++RE
Sbjct: 137 NILSCKVATDASGQSKGHGFVQFESEESAQNAIDKLNGMLINDKQVFVGPFLRKQDRESA 196
Query: 196 L-GEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGKSRGFGFVAYESP 253
L G K F NV++KN + + L+ +F YG ITS VM + DGKS+GFGFV + +
Sbjct: 197 LSGTK---FNNVFVKNLLDSMTEADLERIFGEYGAITSAVVMRDVDGKSKGFGFVNFANV 253
Query: 254 EFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNL 313
+ A KAV+A NGK DGK YVG+AQKK+ER ELK + E + E +++Y G NLY+KNL
Sbjct: 254 DDAAKAVEALNGKNFDGKEWYVGKAQKKSERELELKGQHEQITKETVDKYHGTNLYIKNL 313
Query: 314 DDSIDDERLRKEFTPFGTITSAK 336
DDS+ DE L + F+ FGTITS K
Sbjct: 314 DDSVGDEELMELFSEFGTITSCK 336
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/203 (39%), Positives = 118/203 (58%), Gaps = 11/203 (5%)
Query: 101 RDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFET 160
R+ +L + NVF+KNL S+ + F +G+I S V +D G SKG+GFV+F
Sbjct: 193 RESALSGTKFNNVFVKNLLDSMTEADLERIFGEYGAITSAVVMRDVDGKSKGFGFVNFAN 252
Query: 161 EEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKEL-GEKAKLF---------TNVYIKN 210
+ A K++E +NG + K +VGK + ERE EL G+ ++ TN+YIKN
Sbjct: 253 VDDAAKAVEALNGKNFDGKEWYVGKAQKKSERELELKGQHEQITKETVDKYHGTNLYIKN 312
Query: 211 FGEDFNDEKLKEMFEPYGTITSYRVMNN-DGKSRGFGFVAYESPEFAEKAVQAWNGKEVD 269
+ DE+L E+F +GTITS +VM + +G SRG GFV++ E A +A+ NGK V
Sbjct: 313 LDDSVGDEELMELFSEFGTITSCKVMRDPNGISRGSGFVSFSIAEGATRALGEMNGKMVA 372
Query: 270 GKILYVGRAQKKAERTQELKRRF 292
GK LYV AQ+K +R L+ +F
Sbjct: 373 GKPLYVALAQRKEDRRARLQAQF 395
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 126/250 (50%), Gaps = 25/250 (10%)
Query: 89 LKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQD-EQ 147
L+ I S +PSL ++++ +L +++ +YD F+ ++S ++ +D
Sbjct: 5 LENPTIDAAASGANPSLTTI---SLYVGDLHHDVNDPQLYDLFNQVAQVVSVRICRDVAT 61
Query: 148 GNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVY 207
S GYG+V+F A K+I+ +N LN KI+ + I R ++ G NV+
Sbjct: 62 QQSLGYGYVNFSNAHDAAKAIDVLNFTPLNGKIIRIMYSI-RDPSARKSGA-----ANVF 115
Query: 208 IKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGKSRGFGFVAYESPEFAEKAVQAWNGK 266
IKN + + + L + F +G I S +V + G+S+G GFV +ES E A+ A+ NG
Sbjct: 116 IKNLDKAIDHKALYDTFSAFGNILSCKVATDASGQSKGHGFVQFESEESAQNAIDKLNGM 175
Query: 267 EVDGKILYVGRAQKKAERTQELK-RRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKE 325
++ K ++VG +K +R L +F N++VKNL DS+ + L +
Sbjct: 176 LINDKQVFVGPFLRKQDRESALSGTKFN-------------NVFVKNLLDSMTEADLERI 222
Query: 326 FTPFGTITSA 335
F +G ITSA
Sbjct: 223 FGEYGAITSA 232
>gi|354499752|ref|XP_003511970.1| PREDICTED: polyadenylate-binding protein 5-like [Cricetulus
griseus]
gi|344240775|gb|EGV96878.1| Polyadenylate-binding protein 5 [Cricetulus griseus]
Length = 382
Score = 294 bits (753), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 146/266 (54%), Positives = 203/266 (76%), Gaps = 3/266 (1%)
Query: 73 YMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFS 132
+ D E AL+TMNFD + G+P R+MWSQ D LRKSGVGN+FIK+LDKSIDN+ ++ FS
Sbjct: 68 FPADAEWALNTMNFDLINGKPFRLMWSQPDDRLRKSGVGNIFIKHLDKSIDNRTLFYLFS 127
Query: 133 AFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKER 192
AFG+ILSCKV D+ G SKGY +VHF++ AAN++I +NG+ LN++ V+VG+F +ER
Sbjct: 128 AFGNILSCKVVCDDNG-SKGYAYVHFDSLAAANRAIWHMNGVWLNNRQVYVGRFKFPEER 186
Query: 193 EKELGEKAK-LFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGKSRGFGFVAY 250
E+ + + FTNV++KN G++ +DEKLKE+F YG S +V+ + GKS+GFGFV Y
Sbjct: 187 AAEVRTRDRATFTNVFVKNLGDNMDDEKLKELFSEYGPTESVKVIRDASGKSKGFGFVRY 246
Query: 251 ESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYV 310
E+ E A+K+V +GK +DGK+LYVGRAQKK ER EL+RRFE LK++ +R GV +Y+
Sbjct: 247 ETHEAAQKSVLDLHGKTIDGKVLYVGRAQKKIERLAELRRRFERLKLKEKSRPPGVPIYI 306
Query: 311 KNLDDSIDDERLRKEFTPFGTITSAK 336
KNLD++IDDE+L++EF+ FG+I+ AK
Sbjct: 307 KNLDETIDDEKLKEEFSSFGSISRAK 332
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 71/180 (39%), Positives = 104/180 (57%), Gaps = 10/180 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NVF+KNL ++D++ + + FS +G S KV +D G SKG+GFV +ET EAA KS+ +
Sbjct: 200 NVFVKNLGDNMDDEKLKELFSEYGPTESVKVIRDASGKSKGFGFVRYETHEAAQKSVLDL 259
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELG---EKAKL-------FTNVYIKNFGEDFNDEKLK 221
+G ++ K+++VG+ + ER EL E+ KL +YIKN E +DEKLK
Sbjct: 260 HGKTIDGKVLYVGRAQKKIERLAELRRRFERLKLKEKSRPPGVPIYIKNLDETIDDEKLK 319
Query: 222 EMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKK 281
E F +G+I+ +VM G+ +GF V + S E A KAV NG + K L V Q +
Sbjct: 320 EEFSSFGSISRAKVMMEMGQGKGFAVVCFSSFEEATKAVDEMNGPVLGSKPLSVTLGQAR 379
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 114/223 (51%), Gaps = 16/223 (7%)
Query: 115 IKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSK-GYGFVHFETEEAANKSIEKVNG 173
+ +L + +Y F G + ++ +D +S GYG+V+F A ++ +N
Sbjct: 22 VGDLGPEVTEDMLYKKFRPAGPLRFTRICRDPVTHSPLGYGYVNFRFPADAEWALNTMNF 81
Query: 174 MLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSY 233
L+N K + P +R ++ G N++IK+ + ++ L +F +G I S
Sbjct: 82 DLINGKPFRLMWSQP-DDRLRKSG-----VGNIFIKHLDKSIDNRTLFYLFSAFGNILSC 135
Query: 234 RVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFE 293
+V+ +D S+G+ +V ++S A +A+ NG ++ + +YVGR + ER E++ R
Sbjct: 136 KVVCDDNGSKGYAYVHFDSLAAANRAIWHMNGVWLNNRQVYVGRFKFPEERAAEVRTR-- 193
Query: 294 MLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+R N++VKNL D++DDE+L++ F+ +G S K
Sbjct: 194 -------DRATFTNVFVKNLGDNMDDEKLKELFSEYGPTESVK 229
>gi|365985359|ref|XP_003669512.1| hypothetical protein NDAI_0C06100 [Naumovozyma dairenensis CBS 421]
gi|343768280|emb|CCD24269.1| hypothetical protein NDAI_0C06100 [Naumovozyma dairenensis CBS 421]
Length = 585
Score = 294 bits (753), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 139/260 (53%), Positives = 191/260 (73%), Gaps = 1/260 (0%)
Query: 78 ERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSI 137
++A++ +N+ +KGR RIMWSQRDP+LRK G N+FIKNL IDNKA+YDTFS FG+I
Sbjct: 95 KKAIEKLNYTPIKGRLCRIMWSQRDPALRKKGSANIFIKNLHSDIDNKALYDTFSVFGNI 154
Query: 138 LSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELG 197
LS K+A DE G SKG+GFVHFE + AA ++I+ +NGMLLN + +FVG + RKER+ +L
Sbjct: 155 LSSKIATDETGKSKGFGFVHFEDDTAAKEAIDALNGMLLNGQEIFVGPHLSRKERDSQLE 214
Query: 198 EKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRV-MNNDGKSRGFGFVAYESPEFA 256
E FTN+Y+KN + DE+ E+F YG + S + DGK +GFGFV +E+ E A
Sbjct: 215 ESKANFTNIYVKNINLETTDEEFTELFSKYGKVLSAALEKTEDGKLKGFGFVDFENHEDA 274
Query: 257 EKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDS 316
KAV+ NG + + L+V RAQKK ER QELK+++E ++E++ +YQGVNL++KNLDDS
Sbjct: 275 AKAVEELNGSQFKDQELFVSRAQKKYERMQELKKQYEASRLEKMAKYQGVNLFIKNLDDS 334
Query: 317 IDDERLRKEFTPFGTITSAK 336
IDDE+L++EF P+G ITS +
Sbjct: 335 IDDEKLKEEFAPYGNITSVR 354
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 87/231 (37%), Positives = 131/231 (56%), Gaps = 17/231 (7%)
Query: 80 ALDTMNFDALKGRPI----RIMWSQRDPSLR--KSGVGNVFIKNLDKSIDNKAMYDTFSA 133
A+D +N L G+ I + +RD L K+ N+++KN++ ++ + FS
Sbjct: 184 AIDALNGMLLNGQEIFVGPHLSRKERDSQLEESKANFTNIYVKNINLETTDEEFTELFSK 243
Query: 134 FGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKERE 193
+G +LS + + E G KG+GFV FE E A K++E++NG + +FV + + ER
Sbjct: 244 YGKVLSAALEKTEDGKLKGFGFVDFENHEDAAKAVEELNGSQFKDQELFVSRAQKKYERM 303
Query: 194 KELG---EKAKL-------FTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GKS 242
+EL E ++L N++IKN + +DEKLKE F PYG ITS RVM + GKS
Sbjct: 304 QELKKQYEASRLEKMAKYQGVNLFIKNLDDSIDDEKLKEEFAPYGNITSVRVMRTENGKS 363
Query: 243 RGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFE 293
RGFGFV + +PE A KA+ N + V GK LYV AQ+K R +L ++ +
Sbjct: 364 RGFGFVCFSTPEEATKAITEKNQQIVAGKPLYVAIAQRKDVRRSQLAQQIQ 414
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 122/227 (53%), Gaps = 18/227 (7%)
Query: 111 GNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSIE 169
++++ +LD S+ +YD FS GS+ S +V +D S GY +V+F EA K+IE
Sbjct: 40 ASLYVGDLDPSVSEALLYDIFSPIGSVSSIRVCRDAITKTSLGYAYVNFNDHEAGKKAIE 99
Query: 170 KVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGT 229
K+N + ++ I +R+ L +K N++IKN D +++ L + F +G
Sbjct: 100 KLNYTPIKGRLC----RIMWSQRDPALRKKGS--ANIFIKNLHSDIDNKALYDTFSVFGN 153
Query: 230 ITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S ++ ++ GKS+GFGFV +E A++A+ A NG ++G+ ++VG + ER +L
Sbjct: 154 ILSSKIATDETGKSKGFGFVHFEDDTAAKEAIDALNGMLLNGQEIFVGPHLSRKERDSQL 213
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSA 335
+ ++ N+YVKN++ DE + F+ +G + SA
Sbjct: 214 EE----------SKANFTNIYVKNINLETTDEEFTELFSKYGKVLSA 250
>gi|9930616|gb|AAG02117.1|AF293840_1 poly(A) binding protein [Arabidopsis thaliana]
Length = 660
Score = 294 bits (753), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 142/262 (54%), Positives = 190/262 (72%), Gaps = 1/262 (0%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D RA++ +N+ L RPIRIM S RDPS R SG GN+FIKNLD SIDNKA+++TFS+FG
Sbjct: 101 DAYRAMEALNYTPLFDRPIRIMLSNRDPSTRLSGKGNIFIKNLDASIDNKALFETFSSFG 160
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCKVA D G SKGYGFV FE EE+A +I+K+NGML+N K VFVG FI R+ER ++
Sbjct: 161 TILSCKVAMDVTGRSKGYGFVQFEKEESAQAAIDKLNGMLMNDKQVFVGHFIRRQERARD 220
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPE 254
FTNVY+KN ++ +++L++ F +G I+S VM + G SR FGFV +E E
Sbjct: 221 ENTPTPRFTNVYVKNLPKEIGEDELRKTFGKFGVISSAVVMRDQSGNSRCFGFVNFECTE 280
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A AV+ NG + +LYVGRAQKK+ER +EL+R+FE +I R + QG NLY+KNLD
Sbjct: 281 AAASAVEKMNGISLGDDVLYVGRAQKKSEREEELRRKFEQERINRFEKSQGANLYLKNLD 340
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
DS+DDE+L++ F+ +G +TS+K
Sbjct: 341 DSVDDEKLKEMFSEYGNVTSSK 362
Score = 157 bits (398), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 90/217 (41%), Positives = 126/217 (58%), Gaps = 11/217 (5%)
Query: 91 GRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNS 150
G IR RD + NV++KNL K I + TF FG I S V +D+ GNS
Sbjct: 209 GHFIRRQERARDENTPTPRFTNVYVKNLPKEIGEDELRKTFGKFGVISSAVVMRDQSGNS 268
Query: 151 KGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKEL-----GEKAKLF-- 203
+ +GFV+FE EAA ++EK+NG+ L +++VG+ + ERE+EL E+ F
Sbjct: 269 RCFGFVNFECTEAAASAVEKMNGISLGDDVLYVGRAQKKSEREEELRRKFEQERINRFEK 328
Query: 204 ---TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPEFAEKA 259
N+Y+KN + +DEKLKEMF YG +TS +VM N G SRGFGFVAY +PE A +A
Sbjct: 329 SQGANLYLKNLDDSVDDEKLKEMFSEYGNVTSSKVMLNPQGMSRGFGFVAYSNPEEALRA 388
Query: 260 VQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLK 296
+ NGK + K LY+ AQ+K +R L+ F ++
Sbjct: 389 LSEMNGKMIGRKPLYIALAQRKEDRRAHLQALFSQIR 425
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 117/225 (52%), Gaps = 17/225 (7%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
+++ +LD + ++D F +++S +V +D+ S GY +++F A +++E +
Sbjct: 50 SLYAGDLDPKVTEAHLFDLFKHVANVVSVRVCRDQNRRSLGYAYINFSNPNDAYRAMEAL 109
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTIT 231
N L + + + + ++ L K N++IKN +++ L E F +GTI
Sbjct: 110 NYTPLFDRPIRI--MLSNRDPSTRLSGKG----NIFIKNLDASIDNKALFETFSSFGTIL 163
Query: 232 SYRV-MNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKR 290
S +V M+ G+S+G+GFV +E E A+ A+ NG ++ K ++VG ++ ER ++
Sbjct: 164 SCKVAMDVTGRSKGYGFVQFEKEESAQAAIDKLNGMLMNDKQVFVGHFIRRQERARD--- 220
Query: 291 RFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSA 335
E R N+YVKNL I ++ LRK F FG I+SA
Sbjct: 221 --ENTPTPRF-----TNVYVKNLPKEIGEDELRKTFGKFGVISSA 258
>gi|3287682|gb|AAC25510.1| Strong similarity to gb|M97657 poly(A)-binding protein (PABP5) from
A. thaliana [Arabidopsis thaliana]
Length = 655
Score = 294 bits (753), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 142/262 (54%), Positives = 190/262 (72%), Gaps = 1/262 (0%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D RA++ +N+ L RPIRIM S RDPS R SG GN+FIKNLD SIDNKA+++TFS+FG
Sbjct: 101 DAYRAMEALNYTPLFDRPIRIMLSNRDPSTRLSGKGNIFIKNLDASIDNKALFETFSSFG 160
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCKVA D G SKGYGFV FE EE+A +I+K+NGML+N K VFVG FI R+ER ++
Sbjct: 161 TILSCKVAMDVTGRSKGYGFVQFEKEESAQAAIDKLNGMLMNDKQVFVGHFIRRQERARD 220
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPE 254
FTNVY+KN ++ +++L++ F +G I+S VM + G SR FGFV +E E
Sbjct: 221 ENTPTPRFTNVYVKNLPKEIGEDELRKTFGKFGVISSAVVMRDQSGNSRCFGFVNFECTE 280
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A AV+ NG + +LYVGRAQKK+ER +EL+R+FE +I R + QG NLY+KNLD
Sbjct: 281 AAASAVEKMNGISLGDDVLYVGRAQKKSEREEELRRKFEQERINRFEKSQGANLYLKNLD 340
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
DS+DDE+L++ F+ +G +TS+K
Sbjct: 341 DSVDDEKLKEMFSEYGNVTSSK 362
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 90/212 (42%), Positives = 124/212 (58%), Gaps = 11/212 (5%)
Query: 91 GRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNS 150
G IR RD + NV++KNL K I + TF FG I S V +D+ GNS
Sbjct: 209 GHFIRRQERARDENTPTPRFTNVYVKNLPKEIGEDELRKTFGKFGVISSAVVMRDQSGNS 268
Query: 151 KGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKEL-----GEKAKLF-- 203
+ +GFV+FE EAA ++EK+NG+ L +++VG+ + ERE+EL E+ F
Sbjct: 269 RCFGFVNFECTEAAASAVEKMNGISLGDDVLYVGRAQKKSEREEELRRKFEQERINRFEK 328
Query: 204 ---TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPEFAEKA 259
N+Y+KN + +DEKLKEMF YG +TS +VM N G SRGFGFVAY +PE A +A
Sbjct: 329 SQGANLYLKNLDDSVDDEKLKEMFSEYGNVTSSKVMLNPQGMSRGFGFVAYSNPEEALRA 388
Query: 260 VQAWNGKEVDGKILYVGRAQKKAERTQELKRR 291
+ NGK + K LY+ AQ+K +R L+ R
Sbjct: 389 LSEMNGKMIGRKPLYIALAQRKEDRRAHLQIR 420
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 117/225 (52%), Gaps = 17/225 (7%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
+++ +LD + ++D F +++S +V +D+ S GY +++F A +++E +
Sbjct: 50 SLYAGDLDPKVTEAHLFDLFKHVANVVSVRVCRDQNRRSLGYAYINFSNPNDAYRAMEAL 109
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTIT 231
N L + + + + ++ L K N++IKN +++ L E F +GTI
Sbjct: 110 NYTPLFDRPIRI--MLSNRDPSTRLSGKG----NIFIKNLDASIDNKALFETFSSFGTIL 163
Query: 232 SYRV-MNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKR 290
S +V M+ G+S+G+GFV +E E A+ A+ NG ++ K ++VG ++ ER ++
Sbjct: 164 SCKVAMDVTGRSKGYGFVQFEKEESAQAAIDKLNGMLMNDKQVFVGHFIRRQERARD--- 220
Query: 291 RFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSA 335
E R N+YVKNL I ++ LRK F FG I+SA
Sbjct: 221 --ENTPTPRF-----TNVYVKNLPKEIGEDELRKTFGKFGVISSA 258
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 59/94 (62%)
Query: 107 KSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANK 166
KS N+++KNLD S+D++ + + FS +G++ S KV + QG S+G+GFV + E A +
Sbjct: 328 KSQGANLYLKNLDDSVDDEKLKEMFSEYGNVTSSKVMLNPQGMSRGFGFVAYSNPEEALR 387
Query: 167 SIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKA 200
++ ++NG ++ K +++ +++R L +A
Sbjct: 388 ALSEMNGKMIGRKPLYIALAQRKEDRRAHLQIRA 421
>gi|15219945|ref|NP_173690.1| Polyadenylate-binding protein 3 [Arabidopsis thaliana]
gi|12643628|sp|O64380.1|PABP3_ARATH RecName: Full=Polyadenylate-binding protein 3; Short=PABP-3;
Short=Poly(A)-binding protein 3
gi|2505869|emb|CAA72907.1| polyA binding protein PAB3 [Arabidopsis thaliana]
gi|15450820|gb|AAK96681.1| Strong similarity to poly(A)-binding protein (PABP5) [Arabidopsis
thaliana]
gi|332192163|gb|AEE30284.1| Polyadenylate-binding protein 3 [Arabidopsis thaliana]
Length = 660
Score = 294 bits (753), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 142/262 (54%), Positives = 190/262 (72%), Gaps = 1/262 (0%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D RA++ +N+ L RPIRIM S RDPS R SG GN+FIKNLD SIDNKA+++TFS+FG
Sbjct: 101 DAYRAMEALNYTPLFDRPIRIMLSNRDPSTRLSGKGNIFIKNLDASIDNKALFETFSSFG 160
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCKVA D G SKGYGFV FE EE+A +I+K+NGML+N K VFVG FI R+ER ++
Sbjct: 161 TILSCKVAMDVTGRSKGYGFVQFEKEESAQAAIDKLNGMLMNDKQVFVGHFIRRQERARD 220
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPE 254
FTNVY+KN ++ +++L++ F +G I+S VM + G SR FGFV +E E
Sbjct: 221 ENTPTPRFTNVYVKNLPKEIGEDELRKTFGKFGVISSAVVMRDQSGNSRCFGFVNFECTE 280
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A AV+ NG + +LYVGRAQKK+ER +EL+R+FE +I R + QG NLY+KNLD
Sbjct: 281 AAASAVEKMNGISLGDDVLYVGRAQKKSEREEELRRKFEQERINRFEKSQGANLYLKNLD 340
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
DS+DDE+L++ F+ +G +TS+K
Sbjct: 341 DSVDDEKLKEMFSEYGNVTSSK 362
Score = 157 bits (397), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 90/217 (41%), Positives = 126/217 (58%), Gaps = 11/217 (5%)
Query: 91 GRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNS 150
G IR RD + NV++KNL K I + TF FG I S V +D+ GNS
Sbjct: 209 GHFIRRQERARDENTPTPRFTNVYVKNLPKEIGEDELRKTFGKFGVISSAVVMRDQSGNS 268
Query: 151 KGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKEL-----GEKAKLF-- 203
+ +GFV+FE EAA ++EK+NG+ L +++VG+ + ERE+EL E+ F
Sbjct: 269 RCFGFVNFECTEAAASAVEKMNGISLGDDVLYVGRAQKKSEREEELRRKFEQERINRFEK 328
Query: 204 ---TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPEFAEKA 259
N+Y+KN + +DEKLKEMF YG +TS +VM N G SRGFGFVAY +PE A +A
Sbjct: 329 SQGANLYLKNLDDSVDDEKLKEMFSEYGNVTSSKVMLNPQGMSRGFGFVAYSNPEEALRA 388
Query: 260 VQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLK 296
+ NGK + K LY+ AQ+K +R L+ F ++
Sbjct: 389 LSEMNGKMIGRKPLYIALAQRKEDRRAHLQALFSQIR 425
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 117/225 (52%), Gaps = 17/225 (7%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
+++ +LD + ++D F +++S +V +D+ S GY +++F A +++E +
Sbjct: 50 SLYAGDLDPKVTEAHLFDLFKHVANVVSVRVCRDQNRRSLGYAYINFSNPNDAYRAMEAL 109
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTIT 231
N L + + + + ++ L K N++IKN +++ L E F +GTI
Sbjct: 110 NYTPLFDRPIRI--MLSNRDPSTRLSGKG----NIFIKNLDASIDNKALFETFSSFGTIL 163
Query: 232 SYRV-MNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKR 290
S +V M+ G+S+G+GFV +E E A+ A+ NG ++ K ++VG ++ ER ++
Sbjct: 164 SCKVAMDVTGRSKGYGFVQFEKEESAQAAIDKLNGMLMNDKQVFVGHFIRRQERARD--- 220
Query: 291 RFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSA 335
E R N+YVKNL I ++ LRK F FG I+SA
Sbjct: 221 --ENTPTPRF-----TNVYVKNLPKEIGEDELRKTFGKFGVISSA 258
>gi|449494063|ref|XP_004159436.1| PREDICTED: polyadenylate-binding protein 3-like [Cucumis sativus]
Length = 652
Score = 294 bits (752), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 149/263 (56%), Positives = 192/263 (73%), Gaps = 5/263 (1%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D A++ +NF + G+PIRIM S RDPS+RKSG NVFIKNLD SIDNKA+ DTF+AFG
Sbjct: 88 DAVNAMEHLNFTPVNGKPIRIMISNRDPSIRKSGYANVFIKNLDLSIDNKALRDTFAAFG 147
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
++LSCKVA D G SKGYGFV FE+EE+A SIEK+NGMLLN K V+VG FI +ER +
Sbjct: 148 TVLSCKVAVDSNGQSKGYGFVQFESEESAEISIEKLNGMLLNDKQVYVGHFIRHQERIRA 207
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPE 254
G + FTNVY+KN E D+ LK +F P+GTITS VM +++GKS+ FGFV +++ +
Sbjct: 208 NGSQ---FTNVYVKNLPETTTDDDLKNLFAPHGTITSAIVMTDSNGKSKCFGFVNFQNTD 264
Query: 255 FAEKAVQAWNGKEV-DGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNL 313
A AV+ +G + D K LYVGRAQ+KAER EL+ +FE + R + QG NLY+KNL
Sbjct: 265 SAAAAVEKLDGTVLGDDKTLYVGRAQRKAEREAELRAKFEQERKSRFEKLQGANLYIKNL 324
Query: 314 DDSIDDERLRKEFTPFGTITSAK 336
DD IDDE+L++ F+ +GTITS K
Sbjct: 325 DDHIDDEKLKELFSEYGTITSCK 347
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 79/197 (40%), Positives = 119/197 (60%), Gaps = 12/197 (6%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV++KNL ++ + + + F+ G+I S V D G SK +GFV+F+ ++A ++EK+
Sbjct: 214 NVYVKNLPETTTDDDLKNLFAPHGTITSAIVMTDSNGKSKCFGFVNFQNTDSAAAAVEKL 273
Query: 172 NGMLL-NSKIVFVGKFIPRKEREKEL-----GEKAKLF-----TNVYIKNFGEDFNDEKL 220
+G +L + K ++VG+ + ERE EL E+ F N+YIKN + +DEKL
Sbjct: 274 DGTVLGDDKTLYVGRAQRKAEREAELRAKFEQERKSRFEKLQGANLYIKNLDDHIDDEKL 333
Query: 221 KEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQ 279
KE+F YGTITS +VM + G S+G GFVA+ SP+ A KA+ NGK K LYV AQ
Sbjct: 334 KELFSEYGTITSCKVMLDQHGLSKGSGFVAFSSPDEATKALNEMNGKMKGRKPLYVAVAQ 393
Query: 280 KKAERTQELKRRFEMLK 296
+K ER L+ +F ++
Sbjct: 394 RKEERKARLQAQFAQIR 410
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 126/226 (55%), Gaps = 21/226 (9%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSIEK 170
++++ +LD+S++ + + F ++S +V +D+ + S GY +V+F + + A ++E
Sbjct: 36 SLYVGDLDQSVNEGQLLELFGQVAQVVSIRVCRDQTRRQSLGYAYVNFSSHQDAVNAMEH 95
Query: 171 VNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTI 230
+N +N K + I R+ + + + NV+IKN +++ L++ F +GT+
Sbjct: 96 LNFTPVNGKPI----RIMISNRDPSIRKSG--YANVFIKNLDLSIDNKALRDTFAAFGTV 149
Query: 231 TSYRV-MNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELK 289
S +V ++++G+S+G+GFV +ES E AE +++ NG ++ K +YVG + ER
Sbjct: 150 LSCKVAVDSNGQSKGYGFVQFESEESAEISIEKLNGMLLNDKQVYVGHFIRHQERI---- 205
Query: 290 RRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSA 335
R N Q N+YVKNL ++ D+ L+ F P GTITSA
Sbjct: 206 ---------RANGSQFTNVYVKNLPETTTDDDLKNLFAPHGTITSA 242
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 66/137 (48%), Gaps = 18/137 (13%)
Query: 202 LFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDGK--SRGFGFVAYESPEFAEKA 259
L +++Y+ + + N+ +L E+F + S RV + + S G+ +V + S + A A
Sbjct: 33 LSSSLYVGDLDQSVNEGQLLELFGQVAQVVSIRVCRDQTRRQSLGYAYVNFSSHQDAVNA 92
Query: 260 VQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDD 319
++ N V+GK + + + + + + N+++KNLD SID+
Sbjct: 93 MEHLNFTPVNGKPIRIMISNRDPS----------------IRKSGYANVFIKNLDLSIDN 136
Query: 320 ERLRKEFTPFGTITSAK 336
+ LR F FGT+ S K
Sbjct: 137 KALRDTFAAFGTVLSCK 153
>gi|297845300|ref|XP_002890531.1| PAB3 binding protein 3 [Arabidopsis lyrata subsp. lyrata]
gi|297336373|gb|EFH66790.1| PAB3 binding protein 3 [Arabidopsis lyrata subsp. lyrata]
Length = 659
Score = 294 bits (752), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 142/262 (54%), Positives = 190/262 (72%), Gaps = 1/262 (0%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D RA++ +N+ L RPIRIM S RDPS R SG GN+FIKNLD SIDNKA+++TFS+FG
Sbjct: 101 DAYRAMEALNYTPLFERPIRIMLSNRDPSTRLSGKGNIFIKNLDASIDNKALFETFSSFG 160
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCKVA D G SKGYGFV FE EE+A +I+K+NGML+N K VFVG FI R+ER ++
Sbjct: 161 TILSCKVAMDVTGRSKGYGFVQFEKEESAQAAIDKLNGMLMNDKQVFVGHFIRRQERARD 220
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPE 254
FTNVY+KN ++ +++L++ F +G I+S VM + G SR FGFV +E E
Sbjct: 221 ENTPTPRFTNVYVKNLPKEIGEDELRKTFGKFGVISSAVVMRDQSGNSRCFGFVNFECTE 280
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A AV+ NG + +LYVGRAQKK+ER +EL+R+FE +I R + QG NLY+KNLD
Sbjct: 281 AAASAVEKMNGISLGDDVLYVGRAQKKSEREEELRRKFEQERINRFEKSQGANLYLKNLD 340
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
DS+DDE+L++ F+ +G +TS+K
Sbjct: 341 DSVDDEKLKEMFSEYGNVTSSK 362
Score = 157 bits (396), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 89/214 (41%), Positives = 125/214 (58%), Gaps = 11/214 (5%)
Query: 94 IRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGY 153
IR RD + NV++KNL K I + TF FG I S V +D+ GNS+ +
Sbjct: 212 IRRQERARDENTPTPRFTNVYVKNLPKEIGEDELRKTFGKFGVISSAVVMRDQSGNSRCF 271
Query: 154 GFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKEL-----GEKAKLF----- 203
GFV+FE EAA ++EK+NG+ L +++VG+ + ERE+EL E+ F
Sbjct: 272 GFVNFECTEAAASAVEKMNGISLGDDVLYVGRAQKKSEREEELRRKFEQERINRFEKSQG 331
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPEFAEKAVQA 262
N+Y+KN + +DEKLKEMF YG +TS +VM N G SRGFGFVAY +PE A +A+
Sbjct: 332 ANLYLKNLDDSVDDEKLKEMFSEYGNVTSSKVMLNPQGLSRGFGFVAYSNPEEALRALSE 391
Query: 263 WNGKEVDGKILYVGRAQKKAERTQELKRRFEMLK 296
NGK + K LY+ AQ+K +R L+ F ++
Sbjct: 392 MNGKMIGKKPLYIALAQRKEDRRAHLQALFSQIR 425
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 117/225 (52%), Gaps = 17/225 (7%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
+++ +LD + ++D F +++S +V +D+ S GY +++F A +++E +
Sbjct: 50 SLYAGDLDPKVTEAHLFDLFKHVANVVSVRVCRDQNRRSLGYAYINFSNPNDAYRAMEAL 109
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTIT 231
N L + + + + ++ L K N++IKN +++ L E F +GTI
Sbjct: 110 NYTPLFERPIRI--MLSNRDPSTRLSGKG----NIFIKNLDASIDNKALFETFSSFGTIL 163
Query: 232 SYRV-MNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKR 290
S +V M+ G+S+G+GFV +E E A+ A+ NG ++ K ++VG ++ ER ++
Sbjct: 164 SCKVAMDVTGRSKGYGFVQFEKEESAQAAIDKLNGMLMNDKQVFVGHFIRRQERARD--- 220
Query: 291 RFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSA 335
E R N+YVKNL I ++ LRK F FG I+SA
Sbjct: 221 --ENTPTPRF-----TNVYVKNLPKEIGEDELRKTFGKFGVISSA 258
>gi|224105583|ref|XP_002313862.1| predicted protein [Populus trichocarpa]
gi|222850270|gb|EEE87817.1| predicted protein [Populus trichocarpa]
Length = 642
Score = 294 bits (752), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 151/262 (57%), Positives = 197/262 (75%), Gaps = 3/262 (1%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D RAL+ +NF + G PIR+M+S RDPS+RKSG GN+FIKNLDK+ID+KA++DTFS FG
Sbjct: 78 DAARALEVLNFTPVNGSPIRVMYSHRDPSVRKSGAGNIFIKNLDKAIDHKALHDTFSVFG 137
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCKVA D G SKGYGFV F++EEAA K+IEK+NGMLLN K V+VG F+ ++ER+
Sbjct: 138 NILSCKVATDPSGQSKGYGFVQFDSEEAAQKAIEKLNGMLLNDKQVYVGPFLRKQERDTA 197
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPE 254
+K + F NV++KN E +E L + F +GTITS VM + DGKSR FGFV +E+ +
Sbjct: 198 T-DKTR-FNNVFVKNLSETTAEEDLNKAFGEFGTITSVVVMRDGDGKSRCFGFVNFENAD 255
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A KA +A NGK+ D K +VG+AQKK ER ELK+RFE E +++QG NLY+KNLD
Sbjct: 256 DAAKAAEALNGKKFDDKEWFVGKAQKKYEREVELKQRFEQSMKEAADKFQGANLYIKNLD 315
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
DSI DE++++ F+PFGTITS K
Sbjct: 316 DSIGDEKIKELFSPFGTITSCK 337
Score = 137 bits (345), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 96/242 (39%), Positives = 134/242 (55%), Gaps = 23/242 (9%)
Query: 100 QRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFE 159
+RD + K+ NVF+KNL ++ + + F FG+I S V +D G S+ +GFV+FE
Sbjct: 193 ERDTATDKTRFNNVFVKNLSETTAEEDLNKAFGEFGTITSVVVMRDGDGKSRCFGFVNFE 252
Query: 160 TEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELG--------EKAKLF--TNVYIK 209
+ A K+ E +NG + K FVGK + ERE EL E A F N+YIK
Sbjct: 253 NADDAAKAAEALNGKKFDDKEWFVGKAQKKYEREVELKQRFEQSMKEAADKFQGANLYIK 312
Query: 210 NFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGKSRGFGFVAYESPEFAEKAVQAWNGKEV 268
N + DEK+KE+F P+GTITS +VM + +G SRG GFVA+ +PE A +A+ NGK V
Sbjct: 313 NLDDSIGDEKIKELFSPFGTITSCKVMRDPNGISRGSGFVAFSTPEEASRALLEMNGKMV 372
Query: 269 DGKILYVGRAQKKAERTQELKRRFEMLKIERLNRY------QGVNLYVKNLDD--SIDDE 320
K LYV AQ+K +R + R LK ++L + Q L V LD+ S+D
Sbjct: 373 ASKPLYVALAQRKEDR----RARLSFLKCDQLQWHLQLVVCQCTPLLVPVLDNKYSMDKA 428
Query: 321 RL 322
L
Sbjct: 429 HL 430
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 123/226 (54%), Gaps = 22/226 (9%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGN-SKGYGFVHFETEEAANKSIEK 170
++++ +L+ ++ + +YD F+ G ++S +V +D S GYG+V++ + A +++E
Sbjct: 26 SLYVGDLEANVTDSQLYDLFNQVGQVVSVRVCRDLTSRRSLGYGYVNYSNPQDAARALEV 85
Query: 171 VNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTI 230
+N +N + V + R ++ G N++IKN + + + L + F +G I
Sbjct: 86 LNFTPVNGSPIRV-MYSHRDPSVRKSGAG-----NIFIKNLDKAIDHKALHDTFSVFGNI 139
Query: 231 TSYRVMNN-DGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAER-TQEL 288
S +V + G+S+G+GFV ++S E A+KA++ NG ++ K +YVG +K ER T
Sbjct: 140 LSCKVATDPSGQSKGYGFVQFDSEEAAQKAIEKLNGMLLNDKQVYVGPFLRKQERDTATD 199
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITS 334
K RF N++VKNL ++ +E L K F FGTITS
Sbjct: 200 KTRFN-------------NVFVKNLSETTAEEDLNKAFGEFGTITS 232
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 65/135 (48%), Gaps = 18/135 (13%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQ 261
T++Y+ + + D +L ++F G + S RV + +S G+G+V Y +P+ A +A++
Sbjct: 25 TSLYVGDLEANVTDSQLYDLFNQVGQVVSVRVCRDLTSRRSLGYGYVNYSNPQDAARALE 84
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDER 321
N V+G + V + + + + N+++KNLD +ID +
Sbjct: 85 VLNFTPVNGSPIRVMYSHRDPS----------------VRKSGAGNIFIKNLDKAIDHKA 128
Query: 322 LRKEFTPFGTITSAK 336
L F+ FG I S K
Sbjct: 129 LHDTFSVFGNILSCK 143
>gi|58271356|ref|XP_572834.1| polyadenylate-binding protein [Cryptococcus neoformans var.
neoformans JEC21]
gi|134114714|ref|XP_774065.1| hypothetical protein CNBH1100 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|338819167|sp|P0CP47.1|PABP_CRYNB RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|338819168|sp|P0CP46.1|PABP_CRYNJ RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|50256695|gb|EAL19418.1| hypothetical protein CNBH1100 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57229093|gb|AAW45527.1| polyadenylate-binding protein, putative [Cryptococcus neoformans
var. neoformans JEC21]
Length = 673
Score = 293 bits (749), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 146/262 (55%), Positives = 189/262 (72%), Gaps = 1/262 (0%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D ERAL+ +N+ +KG+ RIMWSQRDP+LRK+G GN+FIKNLD+SIDNKA++DTF+AFG
Sbjct: 99 DGERALEHLNYSLIKGQSCRIMWSQRDPALRKTGQGNIFIKNLDQSIDNKALHDTFAAFG 158
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
ILSCKV DE G S+G+ FVH+ T EAA+ +I+ VNGMLLN K V+VG + +KER +
Sbjct: 159 DILSCKVGTDENGKSRGFAFVHYSTGEAADAAIKAVNGMLLNDKKVYVGHHVGKKERLSK 218
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPE 254
+ E FTNVYIKN + D + +++ +P+G S + ++ G S+GFGFV YE+ E
Sbjct: 219 VEELRAQFTNVYIKNVDLEVTDAEFEDLVKPFGPTISVALSRDEKGVSKGFGFVNYENHE 278
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A KAV N KEV+GK LY GRAQ K+ER ELK+ E ++E + GVNLYVKNLD
Sbjct: 279 SARKAVDELNEKEVNGKKLYAGRAQTKSEREAELKKSHEEKRLENEAKSAGVNLYVKNLD 338
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
D DD+RLR EF FGTITS+K
Sbjct: 339 DEWDDDRLRAEFEAFGTITSSK 360
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 78/200 (39%), Positives = 120/200 (60%), Gaps = 11/200 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV+IKN+D + + D FG +S +++DE+G SKG+GFV++E E+A K+++++
Sbjct: 228 NVYIKNVDLEVTDAEFEDLVKPFGPTISVALSRDEKGVSKGFGFVNYENHESARKAVDEL 287
Query: 172 NGMLLNSKIVFVGKFIPRKEREKEL----------GEKAKLFTNVYIKNFGEDFNDEKLK 221
N +N K ++ G+ + ERE EL E N+Y+KN ++++D++L+
Sbjct: 288 NEKEVNGKKLYAGRAQTKSEREAELKKSHEEKRLENEAKSAGVNLYVKNLDDEWDDDRLR 347
Query: 222 EMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
FE +GTITS +VM +D G SRGFGFV Y SP+ A KAV NGK + K LYV AQ+
Sbjct: 348 AEFEAFGTITSSKVMRDDSGVSRGFGFVCYSSPDEATKAVSEMNGKMIGTKPLYVALAQR 407
Query: 281 KAERTQELKRRFEMLKIERL 300
K R Q L+ + +R+
Sbjct: 408 KDVRRQALESQIAQRAQQRM 427
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 62/99 (62%), Gaps = 4/99 (4%)
Query: 107 KSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANK 166
KS N+++KNLD D+ + F AFG+I S KV +D+ G S+G+GFV + + + A K
Sbjct: 326 KSAGVNLYVKNLDDEWDDDRLRAEFEAFGTITSSKVMRDDSGVSRGFGFVCYSSPDEATK 385
Query: 167 SIEKVNGMLLNSKIVFVG----KFIPRKEREKELGEKAK 201
++ ++NG ++ +K ++V K + R+ E ++ ++A+
Sbjct: 386 AVSEMNGKMIGTKPLYVALAQRKDVRRQALESQIAQRAQ 424
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 61/135 (45%), Gaps = 18/135 (13%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQ 261
++Y+ + L E+F G + S RV + +S G+ +V Y + E+A++
Sbjct: 46 ASLYVGELDPSVTEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNAADGERALE 105
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDER 321
N + G+ + +Q R L++ QG N+++KNLD SID++
Sbjct: 106 HLNYSLIKGQSCRIMWSQ----RDPALRKTG-----------QG-NIFIKNLDQSIDNKA 149
Query: 322 LRKEFTPFGTITSAK 336
L F FG I S K
Sbjct: 150 LHDTFAAFGDILSCK 164
>gi|432102707|gb|ELK30188.1| Polyadenylate-binding protein 1 [Myotis davidii]
Length = 650
Score = 293 bits (749), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 144/262 (54%), Positives = 195/262 (74%), Gaps = 2/262 (0%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D AL+TMNFD L G+P+RIMW RDPSLR+SGVGNVF+ +LD SIDNK +YD F+ FG
Sbjct: 72 DAGHALNTMNFDVLHGKPVRIMWCHRDPSLRRSGVGNVFVNHLDASIDNKELYDLFAGFG 131
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCKV DE G KG+GFVHFET EAA+K+I+++NG L+ + VFVG+F +RE+E
Sbjct: 132 TILSCKVVSDENG-PKGHGFVHFETREAADKAIKEMNGSLVKERKVFVGQFKRPNQREEE 190
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPE 254
K + FTNVY+KNF + DE L E+F YG ++S ++M +D GKS+GFGF+ +E
Sbjct: 191 RRAKMEQFTNVYVKNFADGTTDEYLLEIFSQYGPLSSVKIMTDDSGKSKGFGFIRFECHA 250
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A++A++ NGK+ G+ +YV RAQKK ER +EL+++ E +K R+ +Y G++L+VKNL
Sbjct: 251 DAKRAIEEVNGKQFGGRKIYVSRAQKKKEREEELQQKLEEIKQNRIAKYHGMSLFVKNLA 310
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
+S DDE LRK F PFGT+TSAK
Sbjct: 311 ESTDDEHLRKIFAPFGTVTSAK 332
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 66/183 (36%), Positives = 111/183 (60%), Gaps = 10/183 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV++KN ++ + + FS +G + S K+ D+ G SKG+GF+ FE A ++IE+V
Sbjct: 200 NVYVKNFADGTTDEYLLEIFSQYGPLSSVKIMTDDSGKSKGFGFIRFECHADAKRAIEEV 259
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKLK 221
NG + ++V + +KERE+EL +K + ++++KN E +DE L+
Sbjct: 260 NGKQFGGRKIYVSRAQKKKEREEELQQKLEEIKQNRIAKYHGMSLFVKNLAESTDDEHLR 319
Query: 222 EMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKK 281
++F P+GT+TS +V+ G+ +GFGFV++ S E A+KAV+ +GK + + LYV A+ K
Sbjct: 320 KIFAPFGTVTSAKVIVKGGRRKGFGFVSFSSREEAKKAVEEMHGKMLSARPLYVSYARYK 379
Query: 282 AER 284
ER
Sbjct: 380 QER 382
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 122/227 (53%), Gaps = 17/227 (7%)
Query: 111 GNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSIE 169
++++ +L + +Y+ FSA G ILS +V +D S GYG+V+F E A ++
Sbjct: 19 ASLYVGDLHPEVTEAMLYEKFSAAGPILSVRVCRDALSSRSLGYGYVNFHRPEDAGHALN 78
Query: 170 KVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGT 229
+N +L+ K V + + R + G NV++ + ++++L ++F +GT
Sbjct: 79 TMNFDVLHGKPVRI-MWCHRDPSLRRSG-----VGNVFVNHLDASIDNKELYDLFAGFGT 132
Query: 230 ITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELK 289
I S +V++++ +G GFV +E+ E A+KA++ NG V + ++VG+ ++ +R +E +
Sbjct: 133 ILSCKVVSDENGPKGHGFVHFETREAADKAIKEMNGSLVKERKVFVGQFKRPNQREEERR 192
Query: 290 RRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ E Q N+YVKN D DE L + F+ +G ++S K
Sbjct: 193 AKME----------QFTNVYVKNFADGTTDEYLLEIFSQYGPLSSVK 229
>gi|255718749|ref|XP_002555655.1| KLTH0G14344p [Lachancea thermotolerans]
gi|238937039|emb|CAR25218.1| KLTH0G14344p [Lachancea thermotolerans CBS 6340]
Length = 587
Score = 292 bits (748), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 146/258 (56%), Positives = 192/258 (74%), Gaps = 1/258 (0%)
Query: 80 ALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILS 139
A++ +N+ +KGRP RIMWSQRDPSLRK G GNVFIKNL +IDNKA++DTFS FG+ILS
Sbjct: 97 AIEKLNYTPIKGRPCRIMWSQRDPSLRKKGSGNVFIKNLHPAIDNKALHDTFSVFGNILS 156
Query: 140 CKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEK 199
CK+A DE G S+ +GFVHFE EEAA ++I+ +NGMLLN V+V + +K+R+ +L E
Sbjct: 157 CKIATDETGKSRKFGFVHFEEEEAAKEAIDAINGMLLNGLEVYVAPHVSKKDRQSKLDEV 216
Query: 200 AKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRV-MNNDGKSRGFGFVAYESPEFAEK 258
FTNVY+KN + E+ ++MF YG ITS + +N+GK RGFGFV +E A K
Sbjct: 217 KSNFTNVYVKNIDSETTQEEFEKMFSNYGAITSAVLERDNEGKLRGFGFVNFEDHNAALK 276
Query: 259 AVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSID 318
A + N + G+ LYVGRAQKK ER QELK+++E ++E+L +YQGVNL+VKNLDDS+D
Sbjct: 277 ACEELNDTDFKGQKLYVGRAQKKYERLQELKKQYESSRMEKLAKYQGVNLFVKNLDDSVD 336
Query: 319 DERLRKEFTPFGTITSAK 336
D++L +EF PFGTITS K
Sbjct: 337 DQKLEEEFAPFGTITSVK 354
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/198 (36%), Positives = 116/198 (58%), Gaps = 11/198 (5%)
Query: 107 KSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANK 166
KS NV++KN+D + FS +G+I S + +D +G +G+GFV+FE AA K
Sbjct: 217 KSNFTNVYVKNIDSETTQEEFEKMFSNYGAITSAVLERDNEGKLRGFGFVNFEDHNAALK 276
Query: 167 SIEKVNGMLLNSKIVFVGKFIPRKEREKELG--------EKAKLF--TNVYIKNFGEDFN 216
+ E++N + ++VG+ + ER +EL EK + N+++KN + +
Sbjct: 277 ACEELNDTDFKGQKLYVGRAQKKYERLQELKKQYESSRMEKLAKYQGVNLFVKNLDDSVD 336
Query: 217 DEKLKEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYV 275
D+KL+E F P+GTITS +VM ++ G S+GFGFV + +PE A KA+ N + V GK LYV
Sbjct: 337 DQKLEEEFAPFGTITSVKVMRDEAGNSKGFGFVCFSTPEEATKAITEKNQQIVAGKPLYV 396
Query: 276 GRAQKKAERTQELKRRFE 293
AQ+K R +L ++ +
Sbjct: 397 AIAQRKEVRRSQLAQQIQ 414
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 73/228 (32%), Positives = 113/228 (49%), Gaps = 24/228 (10%)
Query: 113 VFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSIEKV 171
+++ LD S+ +YD FS GS+ S +V +D S GY +V+F A +IEK+
Sbjct: 42 LYVGELDPSVTEALLYDLFSPIGSVSSIRVCRDAITKTSLGYAYVNFHDHNAGRTAIEKL 101
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTIT 231
N + + I +R+ L +K NV+IKN +++ L + F +G I
Sbjct: 102 NYTPIKGRPC----RIMWSQRDPSLRKKGS--GNVFIKNLHPAIDNKALHDTFSVFGNIL 155
Query: 232 SYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQ---E 287
S ++ ++ GKSR FGFV +E E A++A+ A NG ++G +YV K +R E
Sbjct: 156 SCKIATDETGKSRKFGFVHFEEEEAAKEAIDAINGMLLNGLEVYVAPHVSKKDRQSKLDE 215
Query: 288 LKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSA 335
+K F N+YVKN+D E K F+ +G ITSA
Sbjct: 216 VKSNF-------------TNVYVKNIDSETTQEEFEKMFSNYGAITSA 250
>gi|237833723|ref|XP_002366159.1| polyadenylate-binding protein, putative [Toxoplasma gondii ME49]
gi|211963823|gb|EEA99018.1| polyadenylate-binding protein, putative [Toxoplasma gondii ME49]
Length = 768
Score = 292 bits (748), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 151/287 (52%), Positives = 195/287 (67%), Gaps = 30/287 (10%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D ER+LDT+N+ +KG+P RIMW RDPSLRKSG GN+F+KNLDK+IDNKA+YDTFS FG
Sbjct: 136 DAERSLDTLNYTVIKGQPCRIMWCHRDPSLRKSGNGNIFVKNLDKNIDNKALYDTFSLFG 195
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCKVA D+ G+SKGYGFVH+E EE+A +I+KVNGML+ K V+VG FI R ER+
Sbjct: 196 NILSCKVAVDDNGHSKGYGFVHYENEESARSAIDKVNGMLIGGKTVYVGPFIRRAERDN- 254
Query: 196 LGEKAKLFTNVYIKNFGEDFNDE-KLKEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPE 254
L E +TNVYIKN + DE +L+E F +G+ITS V+ D K R F F + +
Sbjct: 255 LAEAK--YTNVYIKNMPSAWEDESRLRETFSKFGSITSL-VVRKDPKGRLFAFCNFADHD 311
Query: 255 FAEKAVQAWNGKEVD-------------------------GKILYVGRAQKKAERTQELK 289
A+ AV+A NGK V +IL+VG Q KA R+ L+
Sbjct: 312 SAKAAVEALNGKRVTDAGAIKEGEDSGAEEKEEEGQKREGDQILFVGPHQSKAHRSAMLR 371
Query: 290 RRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+FE + +R +R+QGVNLY+KN+DDSIDDE+LR+ F PFG+ITSAK
Sbjct: 372 AKFEQMNQDRNDRFQGVNLYIKNMDDSIDDEKLRQLFEPFGSITSAK 418
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 82/259 (31%), Positives = 137/259 (52%), Gaps = 44/259 (16%)
Query: 80 ALDTMNFDALKGRPIR----IMWSQRDPSLRKSGVGNVFIKNLDKSIDNKA-MYDTFSAF 134
A+D +N + G+ + I ++RD +L ++ NV+IKN+ + ++++ + +TFS F
Sbjct: 227 AIDKVNGMLIGGKTVYVGPFIRRAERD-NLAEAKYTNVYIKNMPSAWEDESRLRETFSKF 285
Query: 135 GSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNS---------------- 178
GSI S V +D +G + + F +F ++A ++E +NG +
Sbjct: 286 GSITSLVVRKDPKG--RLFAFCNFADHDSAKAAVEALNGKRVTDAGAIKEGEDSGAEEKE 343
Query: 179 ---------KIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEK 219
+I+FVG + R L K + N+YIKN + +DEK
Sbjct: 344 EEGQKREGDQILFVGPHQSKAHRSAMLRAKFEQMNQDRNDRFQGVNLYIKNMDDSIDDEK 403
Query: 220 LKEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRA 278
L+++FEP+G+ITS +VM ++ G SR FGFV + SPE A KAV + K V GK LYVG A
Sbjct: 404 LRQLFEPFGSITSAKVMRDERGVSRCFGFVCFMSPEEATKAVTEMHLKLVKGKPLYVGLA 463
Query: 279 QKKAERTQELKRRFEMLKI 297
+++ +R L++RF + +
Sbjct: 464 ERREQRLMRLQQRFRLPSL 482
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 62/134 (46%), Gaps = 18/134 (13%)
Query: 205 NVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQA 262
++Y+ + +D + L E+F G +TS RV + +S G+ +V Y+ + AE+++
Sbjct: 84 SLYVGDLHQDVTEAMLFEVFNSVGPVTSIRVCRDTVTRRSLGYAYVNYQGIQDAERSLDT 143
Query: 263 WNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERL 322
N + G+ + + L + N++VKNLD +ID++ L
Sbjct: 144 LNYTVIKGQPCRIMWCHRDPS----------------LRKSGNGNIFVKNLDKNIDNKAL 187
Query: 323 RKEFTPFGTITSAK 336
F+ FG I S K
Sbjct: 188 YDTFSLFGNILSCK 201
>gi|392574075|gb|EIW67212.1| hypothetical protein TREMEDRAFT_40410 [Tremella mesenterica DSM
1558]
Length = 666
Score = 292 bits (747), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 144/262 (54%), Positives = 192/262 (73%), Gaps = 1/262 (0%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D ERAL+ +N+ A+KGRP RIMWSQRDP+LRK+G GN+FIKNLD+SIDNKA++DTF+AFG
Sbjct: 93 DGERALEHLNYSAIKGRPCRIMWSQRDPALRKTGQGNIFIKNLDESIDNKALHDTFAAFG 152
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
ILSCKV DE G S+G+ FVH++T EAA+ +I+ V+GM+LN K VFVG I +KER+ +
Sbjct: 153 EILSCKVGVDEDGKSRGFAFVHYQTGEAADAAIKGVDGMMLNDKKVFVGHHIGKKERQSK 212
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG-TITSYRVMNNDGKSRGFGFVAYESPE 254
E+ FTNV++KN +++ +++ +G T++ ++ +GKS+GFGFV Y S E
Sbjct: 213 AEEQRAHFTNVFVKNVDLSVTEKEFEDLVSKFGETVSIALSLDEEGKSKGFGFVNYVSHE 272
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
AEKAV N KEV+G+ L+ GRAQK+ ER EL++ E + E + GVNLYVKNLD
Sbjct: 273 AAEKAVDELNDKEVNGQKLWAGRAQKRVERDTELRKTIEEKRQEFDAKSAGVNLYVKNLD 332
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
D DD+RLR EF FGTITS K
Sbjct: 333 DEWDDDRLRAEFDSFGTITSCK 354
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 80/205 (39%), Positives = 124/205 (60%), Gaps = 11/205 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NVF+KN+D S+ K D S FG +S ++ DE+G SKG+GFV++ + EAA K+++++
Sbjct: 222 NVFVKNVDLSVTEKEFEDLVSKFGETVSIALSLDEEGKSKGFGFVNYVSHEAAEKAVDEL 281
Query: 172 NGMLLNSKIVFVGKFIPRKEREKEL----GEKAKLF------TNVYIKNFGEDFNDEKLK 221
N +N + ++ G+ R ER+ EL EK + F N+Y+KN ++++D++L+
Sbjct: 282 NDKEVNGQKLWAGRAQKRVERDTELRKTIEEKRQEFDAKSAGVNLYVKNLDDEWDDDRLR 341
Query: 222 EMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
F+ +GTITS +VM ++ G SR FGFV Y SPE A KAV NGK + K LYV AQ+
Sbjct: 342 AEFDSFGTITSCKVMKDERGVSRNFGFVCYSSPEEATKAVSEMNGKMIGSKPLYVALAQR 401
Query: 281 KAERTQELKRRFEMLKIERLNRYQG 305
+ R Q L+ + +R+ G
Sbjct: 402 REARRQALESQIAQRTNQRVPYAPG 426
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 80/149 (53%), Gaps = 24/149 (16%)
Query: 77 TERALDTMNFDALKGRPIRIMWS-------QRDPSLRKS-------------GVGNVFIK 116
E+A+D +N + G+ +W+ +RD LRK+ GV N+++K
Sbjct: 274 AEKAVDELNDKEVNGQ---KLWAGRAQKRVERDTELRKTIEEKRQEFDAKSAGV-NLYVK 329
Query: 117 NLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLL 176
NLD D+ + F +FG+I SCKV +DE+G S+ +GFV + + E A K++ ++NG ++
Sbjct: 330 NLDDEWDDDRLRAEFDSFGTITSCKVMKDERGVSRNFGFVCYSSPEEATKAVSEMNGKMI 389
Query: 177 NSKIVFVGKFIPRKEREKELGEKAKLFTN 205
SK ++V R+ R + L + TN
Sbjct: 390 GSKPLYVALAQRREARRQALESQIAQRTN 418
Score = 45.4 bits (106), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 62/135 (45%), Gaps = 18/135 (13%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQ 261
++Y+ + L E+F G + S RV + +S G+ +V Y + E+A++
Sbjct: 40 ASLYVGELDPSVTEAMLFEIFNIIGPVASIRVCRDAVTRRSLGYAYVNYLNAADGERALE 99
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDER 321
N + G+ + +Q R L++ QG N+++KNLD+SID++
Sbjct: 100 HLNYSAIKGRPCRIMWSQ----RDPALRKTG-----------QG-NIFIKNLDESIDNKA 143
Query: 322 LRKEFTPFGTITSAK 336
L F FG I S K
Sbjct: 144 LHDTFAAFGEILSCK 158
>gi|326503608|dbj|BAJ86310.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 746
Score = 291 bits (746), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 145/263 (55%), Positives = 194/263 (73%), Gaps = 3/263 (1%)
Query: 75 LDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAF 134
+D RA++ +NF L +PIR+M+S RDPS R+SG N+FIKNLDK+IDNK ++DTFSAF
Sbjct: 174 MDAARAMEALNFAPLNNKPIRVMYSNRDPSSRRSGSANIFIKNLDKTIDNKTLHDTFSAF 233
Query: 135 GSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREK 194
G+ILSCKVA D+ G SKG+GFV +E EE+A +++ +NGML+N K V+VG F+ ++ER+
Sbjct: 234 GAILSCKVAMDDIGQSKGFGFVQYEKEESAQSAMKSLNGMLINDKPVYVGPFLRKQERDN 293
Query: 195 ELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESP 253
+KAK F NV++KN E E L ++F YGTITS VM DGKSR FGFV +ESP
Sbjct: 294 S-SDKAK-FNNVFVKNLSESTTKEDLIKVFSEYGTITSAVVMIGMDGKSRCFGFVNFESP 351
Query: 254 EFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNL 313
+ A +AV+ NGK+++ K YVGRAQKK+ER +LKRRFE + ++YQG NLY+KNL
Sbjct: 352 DDAARAVEELNGKKINDKEWYVGRAQKKSEREMDLKRRFEQSMKDAADKYQGQNLYLKNL 411
Query: 314 DDSIDDERLRKEFTPFGTITSAK 336
DD I D++LR+ F+ FG ITS K
Sbjct: 412 DDGITDDQLRELFSNFGKITSCK 434
Score = 127 bits (319), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 76/235 (32%), Positives = 133/235 (56%), Gaps = 15/235 (6%)
Query: 77 TERALDTMNFDALKGRPIRI----MWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFS 132
+ A+ ++N + +P+ + +RD S K+ NVF+KNL +S + + FS
Sbjct: 263 AQSAMKSLNGMLINDKPVYVGPFLRKQERDNSSDKAKFNNVFVKNLSESTTKEDLIKVFS 322
Query: 133 AFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKER 192
+G+I S V G S+ +GFV+FE+ + A +++E++NG +N K +VG+ + ER
Sbjct: 323 EYGTITSAVVMIGMDGKSRCFGFVNFESPDDAARAVEELNGKKINDKEWYVGRAQKKSER 382
Query: 193 EKELGEKAKLFT----------NVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGK 241
E +L + + N+Y+KN + D++L+E+F +G ITS ++M + +G
Sbjct: 383 EMDLKRRFEQSMKDAADKYQGQNLYLKNLDDGITDDQLRELFSNFGKITSCKIMRDQNGV 442
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLK 296
S+G GFV++ + E A +A+ NGK + GK LYV AQ+K ER L+ +F ++
Sbjct: 443 SKGSGFVSFSTREEASQALTEMNGKMISGKPLYVAFAQRKEERKAMLQAQFSQMR 497
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 71/227 (31%), Positives = 124/227 (54%), Gaps = 22/227 (9%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGN-SKGYGFVHFETEEAANKSIEK 170
++++ +L+ ++ + +Y+ FS G ++S +V +D S GY +V++ A +++E
Sbjct: 123 SLYVGDLEANVTDSQLYELFSQAGQVVSVRVCRDVNSRRSLGYAYVNYSNPMDAARAMEA 182
Query: 171 VNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTI 230
+N LN+K + V + R + G N++IKN + +++ L + F +G I
Sbjct: 183 LNFAPLNNKPIRV-MYSNRDPSSRRSGS-----ANIFIKNLDKTIDNKTLHDTFSAFGAI 236
Query: 231 TSYRV-MNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL- 288
S +V M++ G+S+GFGFV YE E A+ A+++ NG ++ K +YVG +K ER
Sbjct: 237 LSCKVAMDDIGQSKGFGFVQYEKEESAQSAMKSLNGMLINDKPVYVGPFLRKQERDNSSD 296
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSA 335
K +F N++VKNL +S E L K F+ +GTITSA
Sbjct: 297 KAKFN-------------NVFVKNLSESTTKEDLIKVFSEYGTITSA 330
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 64/135 (47%), Gaps = 18/135 (13%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMN--NDGKSRGFGFVAYESPEFAEKAVQ 261
T++Y+ + + D +L E+F G + S RV N +S G+ +V Y +P A +A++
Sbjct: 122 TSLYVGDLEANVTDSQLYELFSQAGQVVSVRVCRDVNSRRSLGYAYVNYSNPMDAARAME 181
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDER 321
A N ++ K + V + + R N+++KNLD +ID++
Sbjct: 182 ALNFAPLNNKPIRVMYSNRDPSS----------------RRSGSANIFIKNLDKTIDNKT 225
Query: 322 LRKEFTPFGTITSAK 336
L F+ FG I S K
Sbjct: 226 LHDTFSAFGAILSCK 240
>gi|321261800|ref|XP_003195619.1| polyadenylate-binding protein [Cryptococcus gattii WM276]
gi|317462093|gb|ADV23832.1| polyadenylate-binding protein, putative [Cryptococcus gattii WM276]
Length = 675
Score = 291 bits (746), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 145/262 (55%), Positives = 190/262 (72%), Gaps = 1/262 (0%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D ERAL+ +N+ +KG+ RIMWSQRDP+LRK+G GN+FIKNLD+SIDNKA++DTF+AFG
Sbjct: 101 DGERALEHLNYSLIKGQSCRIMWSQRDPALRKTGQGNIFIKNLDQSIDNKALHDTFAAFG 160
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
ILSCKV DE G S+G+ FVH+ T EAA+ +I+ VNGMLLN K V+VG + +KER +
Sbjct: 161 DILSCKVGTDENGKSRGFAFVHYSTGEAADAAIKAVNGMLLNDKKVYVGHHVGKKERLSK 220
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG-TITSYRVMNNDGKSRGFGFVAYESPE 254
+ E FTNVYIKN + D + +++ +P+G TI+ + G S+GFGFV YE+ E
Sbjct: 221 VEELRAQFTNVYIKNVDLEVTDAEFEDLVKPFGPTISVALSRDEQGVSKGFGFVNYENHE 280
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A++AV N KE++GK LY GRAQ K+ER ELK+ E +IE + GVNLY+KNLD
Sbjct: 281 SAKQAVDELNEKEINGKKLYAGRAQTKSEREAELKKSHEEKRIENEAKSAGVNLYIKNLD 340
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
D DD+RLR EF FGTITS+K
Sbjct: 341 DEWDDDRLRAEFEAFGTITSSK 362
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 79/200 (39%), Positives = 120/200 (60%), Gaps = 11/200 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV+IKN+D + + D FG +S +++DEQG SKG+GFV++E E+A ++++++
Sbjct: 230 NVYIKNVDLEVTDAEFEDLVKPFGPTISVALSRDEQGVSKGFGFVNYENHESAKQAVDEL 289
Query: 172 NGMLLNSKIVFVGKFIPRKEREKEL----------GEKAKLFTNVYIKNFGEDFNDEKLK 221
N +N K ++ G+ + ERE EL E N+YIKN ++++D++L+
Sbjct: 290 NEKEINGKKLYAGRAQTKSEREAELKKSHEEKRIENEAKSAGVNLYIKNLDDEWDDDRLR 349
Query: 222 EMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
FE +GTITS +VM +D G SRGFGFV Y SP+ A KAV NGK + K LYV AQ+
Sbjct: 350 AEFEAFGTITSSKVMRDDSGVSRGFGFVCYSSPDEATKAVSEMNGKMIGTKPLYVALAQR 409
Query: 281 KAERTQELKRRFEMLKIERL 300
K R Q L+ + +R+
Sbjct: 410 KDVRRQALESQIAQRAQQRM 429
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 62/99 (62%), Gaps = 4/99 (4%)
Query: 107 KSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANK 166
KS N++IKNLD D+ + F AFG+I S KV +D+ G S+G+GFV + + + A K
Sbjct: 328 KSAGVNLYIKNLDDEWDDDRLRAEFEAFGTITSSKVMRDDSGVSRGFGFVCYSSPDEATK 387
Query: 167 SIEKVNGMLLNSKIVFVG----KFIPRKEREKELGEKAK 201
++ ++NG ++ +K ++V K + R+ E ++ ++A+
Sbjct: 388 AVSEMNGKMIGTKPLYVALAQRKDVRRQALESQIAQRAQ 426
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 61/135 (45%), Gaps = 18/135 (13%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQ 261
++Y+ + L E+F G + S RV + +S G+ +V Y + E+A++
Sbjct: 48 ASLYVGELDPSVTEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNAADGERALE 107
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDER 321
N + G+ + +Q R L++ QG N+++KNLD SID++
Sbjct: 108 HLNYSLIKGQSCRIMWSQ----RDPALRKTG-----------QG-NIFIKNLDQSIDNKA 151
Query: 322 LRKEFTPFGTITSAK 336
L F FG I S K
Sbjct: 152 LHDTFAAFGDILSCK 166
>gi|405122394|gb|AFR97161.1| polyadenylate-binding protein [Cryptococcus neoformans var. grubii
H99]
Length = 670
Score = 291 bits (746), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 145/262 (55%), Positives = 188/262 (71%), Gaps = 1/262 (0%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D ERAL+ +N+ +KG+ RIMWSQRDP+LRK+G GN+FIKNLD+SIDNKA++DTF+AFG
Sbjct: 101 DGERALEHLNYSLIKGQSCRIMWSQRDPALRKTGQGNIFIKNLDQSIDNKALHDTFAAFG 160
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
ILSCKV DE G S+G+ FVH+ T EAA+ +I+ VNGMLLN K V+VG + +KER +
Sbjct: 161 DILSCKVGTDENGKSRGFAFVHYSTGEAADAAIKAVNGMLLNDKKVYVGHHVGKKERLSK 220
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPE 254
+ E FTNVYIKN + D + +++ +P+G S + ++ G S+GFGFV YE E
Sbjct: 221 VEELRAQFTNVYIKNVDLEVTDAEFEDLVKPFGPTISVALSRDEKGVSKGFGFVNYEHHE 280
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A KAV N KEV+GK LY GRAQ K+ER ELK+ E ++E + GVNLY+KNLD
Sbjct: 281 SARKAVDELNEKEVNGKKLYAGRAQTKSEREAELKKSHEEKRLENEAKSAGVNLYIKNLD 340
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
D DD+RLR EF FGTITS+K
Sbjct: 341 DEWDDDRLRAEFEAFGTITSSK 362
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 79/200 (39%), Positives = 120/200 (60%), Gaps = 11/200 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV+IKN+D + + D FG +S +++DE+G SKG+GFV++E E+A K+++++
Sbjct: 230 NVYIKNVDLEVTDAEFEDLVKPFGPTISVALSRDEKGVSKGFGFVNYEHHESARKAVDEL 289
Query: 172 NGMLLNSKIVFVGKFIPRKEREKEL----------GEKAKLFTNVYIKNFGEDFNDEKLK 221
N +N K ++ G+ + ERE EL E N+YIKN ++++D++L+
Sbjct: 290 NEKEVNGKKLYAGRAQTKSEREAELKKSHEEKRLENEAKSAGVNLYIKNLDDEWDDDRLR 349
Query: 222 EMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
FE +GTITS +VM +D G SRGFGFV Y SP+ A KAV NGK + K LYV AQ+
Sbjct: 350 AEFEAFGTITSSKVMRDDSGVSRGFGFVCYSSPDEATKAVSEMNGKMIGTKPLYVALAQR 409
Query: 281 KAERTQELKRRFEMLKIERL 300
K R Q L+ + +R+
Sbjct: 410 KDVRRQALESQIAQRAQQRM 429
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 62/99 (62%), Gaps = 4/99 (4%)
Query: 107 KSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANK 166
KS N++IKNLD D+ + F AFG+I S KV +D+ G S+G+GFV + + + A K
Sbjct: 328 KSAGVNLYIKNLDDEWDDDRLRAEFEAFGTITSSKVMRDDSGVSRGFGFVCYSSPDEATK 387
Query: 167 SIEKVNGMLLNSKIVFVG----KFIPRKEREKELGEKAK 201
++ ++NG ++ +K ++V K + R+ E ++ ++A+
Sbjct: 388 AVSEMNGKMIGTKPLYVALAQRKDVRRQALESQIAQRAQ 426
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 61/135 (45%), Gaps = 18/135 (13%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQ 261
++Y+ + L E+F G + S RV + +S G+ +V Y + E+A++
Sbjct: 48 ASLYVGELDPSVTEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNYLNAADGERALE 107
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDER 321
N + G+ + +Q R L++ QG N+++KNLD SID++
Sbjct: 108 HLNYSLIKGQSCRIMWSQ----RDPALRKTG-----------QG-NIFIKNLDQSIDNKA 151
Query: 322 LRKEFTPFGTITSAK 336
L F FG I S K
Sbjct: 152 LHDTFAAFGDILSCK 166
>gi|224085260|ref|XP_002307526.1| predicted protein [Populus trichocarpa]
gi|222856975|gb|EEE94522.1| predicted protein [Populus trichocarpa]
Length = 649
Score = 291 bits (746), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 146/262 (55%), Positives = 185/262 (70%), Gaps = 3/262 (1%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D A++ +NF L G+ IRIM S RDPS+RKSG NVFIKNLD SIDNKA+ +TF++FG
Sbjct: 86 DASNAMELLNFTPLNGKAIRIMVSHRDPSMRKSGHANVFIKNLDTSIDNKALQETFASFG 145
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
S+LSCKVA D G SKGYGFV FE EEAA +I ++NGML+N K VFVG+F+ +ER +
Sbjct: 146 SVLSCKVAVDNNGQSKGYGFVQFENEEAAQSAINRLNGMLINDKEVFVGRFVRHQERIEA 205
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPE 254
G FTNVY+KN E +DE LK+ F YG ITS VM + GKS+GFGFV ++SP+
Sbjct: 206 TGSPK--FTNVYVKNLSETTSDEDLKKFFSNYGAITSAIVMKDQSGKSKGFGFVNFQSPD 263
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A AV+ NG + K+ YVGRAQ+K ER ELK RFE + R + + NLY+KNLD
Sbjct: 264 SAAAAVEKLNGTTFNDKVWYVGRAQRKGEREAELKARFEQERNSRYEKLKAANLYLKNLD 323
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
D IDDE+L++ F+ FG+ITS K
Sbjct: 324 DKIDDEKLKELFSEFGSITSCK 345
Score = 144 bits (363), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 79/202 (39%), Positives = 124/202 (61%), Gaps = 13/202 (6%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV++KNL ++ ++ + FS +G+I S V +D+ G SKG+GFV+F++ ++A ++EK+
Sbjct: 213 NVYVKNLSETTSDEDLKKFFSNYGAITSAIVMKDQSGKSKGFGFVNFQSPDSAAAAVEKL 272
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELG-----------EKAKLFTNVYIKNFGEDFNDEKL 220
NG N K+ +VG+ + ERE EL EK K N+Y+KN + +DEKL
Sbjct: 273 NGTTFNDKVWYVGRAQRKGEREAELKARFEQERNSRYEKLKA-ANLYLKNLDDKIDDEKL 331
Query: 221 KEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQ 279
KE+F +G+ITS +VM + G S+G GFVA+ +PE A +A+ NGK + K LYV AQ
Sbjct: 332 KELFSEFGSITSCKVMLDQQGLSKGSGFVAFSTPEEASRALNGMNGKMIGKKPLYVAVAQ 391
Query: 280 KKAERTQELKRRFEMLKIERLN 301
++ ER L+ F ++ L+
Sbjct: 392 RREERKARLQAHFTQIQAPGLS 413
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 127/226 (56%), Gaps = 20/226 (8%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSIEK 170
++++ +L+ +++ ++D FS ++S +V +D+ + S GY +V+F + A+ ++E
Sbjct: 34 SLYVGDLEHNVNEGQLFDLFSQVAQVVSIRVCRDQARRASLGYAYVNFSNPQDASNAMEL 93
Query: 171 VNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTI 230
+N LN K + I R+ + + NV+IKN +++ L+E F +G++
Sbjct: 94 LNFTPLNGKAI----RIMVSHRDPSMRKSGH--ANVFIKNLDTSIDNKALQETFASFGSV 147
Query: 231 TSYRV-MNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELK 289
S +V ++N+G+S+G+GFV +E+ E A+ A+ NG ++ K ++VGR + ER
Sbjct: 148 LSCKVAVDNNGQSKGYGFVQFENEEAAQSAINRLNGMLINDKEVFVGRFVRHQER----- 202
Query: 290 RRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSA 335
IE + N+YVKNL ++ DE L+K F+ +G ITSA
Sbjct: 203 -------IEATGSPKFTNVYVKNLSETTSDEDLKKFFSNYGAITSA 241
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 61/97 (62%)
Query: 100 QRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFE 159
+R+ K N+++KNLD ID++ + + FS FGSI SCKV D+QG SKG GFV F
Sbjct: 304 ERNSRYEKLKAANLYLKNLDDKIDDEKLKELFSEFGSITSCKVMLDQQGLSKGSGFVAFS 363
Query: 160 TEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKEL 196
T E A++++ +NG ++ K ++V R+ER+ L
Sbjct: 364 TPEEASRALNGMNGKMIGKKPLYVAVAQRREERKARL 400
>gi|255080002|ref|XP_002503581.1| predicted protein [Micromonas sp. RCC299]
gi|226518848|gb|ACO64839.1| predicted protein [Micromonas sp. RCC299]
Length = 597
Score = 291 bits (745), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 147/263 (55%), Positives = 191/263 (72%), Gaps = 6/263 (2%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D RA+D +NF+ + G+PIRIM+SQRDP+LRKSGVGN+FIKNLDK IDNKA+YDTFS FG
Sbjct: 73 DAARAIDVLNFNVVNGKPIRIMYSQRDPALRKSGVGNIFIKNLDKEIDNKALYDTFSQFG 132
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+I+S KVA D QG SKGYGFV F +EAA ++I+KVNGMLLN K V+VG F R ER
Sbjct: 133 NIVSAKVAADGQGVSKGYGFVQFAEQEAAQQAIDKVNGMLLNDKQVYVGPFQRRGER--- 189
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPE 254
G F NVY+KN E +++KLKE+F G +TS +M + +GKS+GFGFV +E E
Sbjct: 190 -GGGPTTFNNVYVKNLHESVDEDKLKEVFGAVGKLTSVVIMKDGEGKSKGFGFVCFEESE 248
Query: 255 FAEKAVQAWNG-KEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNL 313
A +AV+ +G +++ K V RAQKKAER ELK +F+ + ERL + G NLY+KNL
Sbjct: 249 AASEAVEKLDGYDKIEDKAWVVCRAQKKAEREAELKAKFDAERRERLEKMAGANLYIKNL 308
Query: 314 DDSIDDERLRKEFTPFGTITSAK 336
+D++DD +LR+ F FGTITS +
Sbjct: 309 EDTVDDAKLRELFAEFGTITSCR 331
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/195 (40%), Positives = 113/195 (57%), Gaps = 16/195 (8%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV++KNL +S+D + + F A G + S + +D +G SKG+GFV FE EAA++++EK+
Sbjct: 198 NVYVKNLHESVDEDKLKEVFGAVGKLTSVVIMKDGEGKSKGFGFVCFEESEAASEAVEKL 257
Query: 172 NGM-LLNSKIVFVGKFIPRKEREKELGEKAKL------------FTNVYIKNFGEDFNDE 218
+G + K V + + ERE EL KAK N+YIKN + +D
Sbjct: 258 DGYDKIEDKAWVVCRAQKKAEREAEL--KAKFDAERRERLEKMAGANLYIKNLEDTVDDA 315
Query: 219 KLKEMFEPYGTITSYRVMNN-DGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGR 277
KL+E+F +GTITS RVM + G SRG FVA+ S + A +AV NGK K LYV
Sbjct: 316 KLRELFAEFGTITSCRVMRDASGASRGSAFVAFSSADEATRAVTEMNGKMAGTKPLYVAL 375
Query: 278 AQKKAERTQELKRRF 292
AQ+K +R L+ +F
Sbjct: 376 AQRKEDRRMRLQAQF 390
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 119/225 (52%), Gaps = 22/225 (9%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSIEK 170
+++ +LD + +Y+ FS G ++S +V +D S GY +V+F+ A ++I+
Sbjct: 21 SLYCGDLDSNCTEAQLYELFSTIGPVVSIRVCRDLITRRSLGYAYVNFQQGADAARAIDV 80
Query: 171 VNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTI 230
+N ++N K + I +R+ L + N++IKN ++ +++ L + F +G I
Sbjct: 81 LNFNVVNGKPI----RIMYSQRDPALRKSG--VGNIFIKNLDKEIDNKALYDTFSQFGNI 134
Query: 231 TSYRV-MNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELK 289
S +V + G S+G+GFV + E A++A+ NG ++ K +YVG Q++ ER
Sbjct: 135 VSAKVAADGQGVSKGYGFVQFAEQEAAQQAIDKVNGMLLNDKQVYVGPFQRRGERGGG-P 193
Query: 290 RRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITS 334
F N+YVKNL +S+D+++L++ F G +TS
Sbjct: 194 TTFN-------------NVYVKNLHESVDEDKLKEVFGAVGKLTS 225
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 57/93 (61%), Gaps = 1/93 (1%)
Query: 99 SQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHF 158
++R L K N++IKNL+ ++D+ + + F+ FG+I SC+V +D G S+G FV F
Sbjct: 289 AERRERLEKMAGANLYIKNLEDTVDDAKLRELFAEFGTITSCRVMRDASGASRGSAFVAF 348
Query: 159 ETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKE 191
+ + A +++ ++NG + +K ++V RKE
Sbjct: 349 SSADEATRAVTEMNGKMAGTKPLYVA-LAQRKE 380
>gi|413918857|gb|AFW58789.1| hypothetical protein ZEAMMB73_983608 [Zea mays]
Length = 412
Score = 291 bits (745), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 150/274 (54%), Positives = 197/274 (71%), Gaps = 8/274 (2%)
Query: 69 LGQPYM-----LDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSID 123
LG Y+ LD RAL+ +NF AL +PIR+M+S RDPS R+SG N+FIKNLDK+ID
Sbjct: 75 LGYAYVNYSNPLDAARALEVLNFAALNNKPIRVMYSNRDPSSRRSGSANIFIKNLDKTID 134
Query: 124 NKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFV 183
NK +++TFS+FG+ILSCKVA DE G SKG+GFV ++ EEAA +I+ +NGML+N K VFV
Sbjct: 135 NKTLHETFSSFGTILSCKVAVDEAGQSKGFGFVQYDKEEAAQNAIKSLNGMLINDKPVFV 194
Query: 184 GKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKS 242
G F+ ++ER+ +K K F NV++KN E E L ++F YG ITS VM DGKS
Sbjct: 195 GPFVRKQERDHSF-DKTK-FNNVFVKNLSESTTKEDLLKIFGEYGDITSAVVMIGMDGKS 252
Query: 243 RGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNR 302
R FGF+ +E+P+ A AVQ NGK+++ K YVGRAQKK+ER ELKRRFE + ++
Sbjct: 253 RCFGFINFENPDAASHAVQELNGKKINDKEWYVGRAQKKSEREMELKRRFEQSLKDAADK 312
Query: 303 YQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
YQG+NLY+KNLDDSI D++L + F+ FG ITS K
Sbjct: 313 YQGLNLYLKNLDDSIGDDQLCELFSNFGKITSYK 346
Score = 127 bits (318), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 76/228 (33%), Positives = 127/228 (55%), Gaps = 15/228 (6%)
Query: 77 TERALDTMNFDALKGRPIRI----MWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFS 132
+ A+ ++N + +P+ + +RD S K+ NVF+KNL +S + + F
Sbjct: 175 AQNAIKSLNGMLINDKPVFVGPFVRKQERDHSFDKTKFNNVFVKNLSESTTKEDLLKIFG 234
Query: 133 AFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKER 192
+G I S V G S+ +GF++FE +AA+ +++++NG +N K +VG+ + ER
Sbjct: 235 EYGDITSAVVMIGMDGKSRCFGFINFENPDAASHAVQELNGKKINDKEWYVGRAQKKSER 294
Query: 193 EKELGEKAKLFT----------NVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGK 241
E EL + + N+Y+KN + D++L E+F +G ITSY+VM + +G
Sbjct: 295 EMELKRRFEQSLKDAADKYQGLNLYLKNLDDSIGDDQLCELFSNFGKITSYKVMRDQNGL 354
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELK 289
S+G GFVA+ + E A +A+ NGK + GK LYV AQ+K +R L+
Sbjct: 355 SKGSGFVAFSTREEASQALTEMNGKMISGKPLYVAFAQRKEDRKAMLQ 402
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 122/227 (53%), Gaps = 22/227 (9%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGN-SKGYGFVHFETEEAANKSIEK 170
++++ +L+ ++ + +Y+ FS G ++S +V +D S GY +V++ A +++E
Sbjct: 35 SLYVGDLEGAVSDSQLYELFSQAGQVVSVRVCRDVTSRRSLGYAYVNYSNPLDAARALEV 94
Query: 171 VNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTI 230
+N LN+K + V + R + G N++IKN + +++ L E F +GTI
Sbjct: 95 LNFAALNNKPIRV-MYSNRDPSSRRSGS-----ANIFIKNLDKTIDNKTLHETFSSFGTI 148
Query: 231 TSYRV-MNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL- 288
S +V ++ G+S+GFGFV Y+ E A+ A+++ NG ++ K ++VG +K ER
Sbjct: 149 LSCKVAVDEAGQSKGFGFVQYDKEEAAQNAIKSLNGMLINDKPVFVGPFVRKQERDHSFD 208
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSA 335
K +F N++VKNL +S E L K F +G ITSA
Sbjct: 209 KTKFN-------------NVFVKNLSESTTKEDLLKIFGEYGDITSA 242
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 65/135 (48%), Gaps = 18/135 (13%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQ 261
T++Y+ + +D +L E+F G + S RV + +S G+ +V Y +P A +A++
Sbjct: 34 TSLYVGDLEGAVSDSQLYELFSQAGQVVSVRVCRDVTSRRSLGYAYVNYSNPLDAARALE 93
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDER 321
N ++ K + V + + R N+++KNLD +ID++
Sbjct: 94 VLNFAALNNKPIRVMYSNRDPSS----------------RRSGSANIFIKNLDKTIDNKT 137
Query: 322 LRKEFTPFGTITSAK 336
L + F+ FGTI S K
Sbjct: 138 LHETFSSFGTILSCK 152
>gi|412991277|emb|CCO16122.1| predicted protein [Bathycoccus prasinos]
Length = 620
Score = 291 bits (745), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 148/264 (56%), Positives = 192/264 (72%), Gaps = 8/264 (3%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D RA+D +NF + G+PIRI++SQRDP++RKSGVGN+FIKNLDK ID A+ DTF+ FG
Sbjct: 96 DAARAIDVLNFQVVNGKPIRILYSQRDPTIRKSGVGNIFIKNLDKDIDTVALRDTFAQFG 155
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+I+S KVA D QGNSKGYGF+ F+TE AA ++IEKVNGM LN K+V+VG F R ER
Sbjct: 156 NIVSAKVATDGQGNSKGYGFIQFDTEAAAKEAIEKVNGMELNDKVVYVGPFQRRAER--- 212
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPE 254
G F NV++KN G++ DE+L+++FE +G +TS + + DGKS+GFGFV YE+PE
Sbjct: 213 -GTTETKFNNVFVKNLGDEVTDEELRKVFEGFGPVTSVMISKDEDGKSKGFGFVCYETPE 271
Query: 255 FAEKAVQAWNGK--EVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKN 312
A KAV+ +GK E D K + V RAQKKAER ELK +FE + ER+ + G NLY+KN
Sbjct: 272 DASKAVEELDGKHGEEDKKWV-VCRAQKKAEREAELKAKFEAERRERMEKMAGANLYIKN 330
Query: 313 LDDSIDDERLRKEFTPFGTITSAK 336
L+D DDE LR+ F FGTITS +
Sbjct: 331 LEDGADDETLRELFKEFGTITSCR 354
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/195 (41%), Positives = 114/195 (58%), Gaps = 16/195 (8%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NVF+KNL + ++ + F FG + S +++DE G SKG+GFV +ET E A+K++E++
Sbjct: 221 NVFVKNLGDEVTDEELRKVFEGFGPVTSVMISKDEDGKSKGFGFVCYETPEDASKAVEEL 280
Query: 172 NGML-LNSKIVFVGKFIPRKEREKELGEKAKL------------FTNVYIKNFGEDFNDE 218
+G K V + + ERE EL KAK N+YIKN + +DE
Sbjct: 281 DGKHGEEDKKWVVCRAQKKAEREAEL--KAKFEAERRERMEKMAGANLYIKNLEDGADDE 338
Query: 219 KLKEMFEPYGTITSYRVMNN-DGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGR 277
L+E+F+ +GTITS RVM + G SRG FVA+ SPE A +AV NGK V K LYV
Sbjct: 339 TLRELFKEFGTITSCRVMRDASGVSRGSAFVAFSSPEEATRAVTELNGKMVGAKPLYVAL 398
Query: 278 AQKKAERTQELKRRF 292
AQ+K +R L+ +F
Sbjct: 399 AQRKEDRRMRLQAQF 413
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 124/226 (54%), Gaps = 24/226 (10%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSIEK 170
++++ +L+ S +Y+ FS G ++S +V +D S GY +V+F + A ++I+
Sbjct: 44 SLYVGDLESSATEAQLYELFSTIGPVVSIRVCRDLITRRSLGYAYVNFSQAQDAARAIDV 103
Query: 171 VNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTI 230
+N ++N K + I +R+ + + N++IKN +D + L++ F +G I
Sbjct: 104 LNFQVVNGKPI----RILYSQRDPTIRKSG--VGNIFIKNLDKDIDTVALRDTFAQFGNI 157
Query: 231 TSYRVMNN-DGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAER-TQEL 288
S +V + G S+G+GF+ +++ A++A++ NG E++ K++YVG Q++AER T E
Sbjct: 158 VSAKVATDGQGNSKGYGFIQFDTEAAAKEAIEKVNGMELNDKVVYVGPFQRRAERGTTET 217
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITS 334
K N++VKNL D + DE LRK F FG +TS
Sbjct: 218 KFN---------------NVFVKNLGDEVTDEELRKVFEGFGPVTS 248
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 56/93 (60%), Gaps = 1/93 (1%)
Query: 99 SQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHF 158
++R + K N++IKNL+ D++ + + F FG+I SC+V +D G S+G FV F
Sbjct: 312 AERRERMEKMAGANLYIKNLEDGADDETLRELFKEFGTITSCRVMRDASGVSRGSAFVAF 371
Query: 159 ETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKE 191
+ E A +++ ++NG ++ +K ++V RKE
Sbjct: 372 SSPEEATRAVTELNGKMVGAKPLYVA-LAQRKE 403
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 64/136 (47%), Gaps = 20/136 (14%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQ 261
T++Y+ + + +L E+F G + S RV + +S G+ +V + + A +A+
Sbjct: 43 TSLYVGDLESSATEAQLYELFSTIGPVVSIRVCRDLITRRSLGYAYVNFSQAQDAARAID 102
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGV-NLYVKNLDDSIDDE 320
N + V+GK + + +Q+ + R GV N+++KNLD ID
Sbjct: 103 VLNFQVVNGKPIRILYSQR-----------------DPTIRKSGVGNIFIKNLDKDIDTV 145
Query: 321 RLRKEFTPFGTITSAK 336
LR F FG I SAK
Sbjct: 146 ALRDTFAQFGNIVSAK 161
>gi|444720785|gb|ELW61557.1| Polyadenylate-binding protein 1 [Tupaia chinensis]
Length = 232
Score = 291 bits (744), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 147/230 (63%), Positives = 177/230 (76%), Gaps = 6/230 (2%)
Query: 56 TCHQLGSGAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFI 115
TCH LG V +P D ERALDTMNFD +KG+P+RIMWSQ DPSL KS V N+FI
Sbjct: 3 TCHSLG--YTYVDFQKP--TDMERALDTMNFDVIKGKPVRIMWSQHDPSLHKSEVSNIFI 58
Query: 116 KNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGML 175
KNL KSIDNKA+YDTF AFG+ILSCKV DE G SKGYGFVHFET+EA ++IEK++GML
Sbjct: 59 KNLGKSIDNKALYDTFPAFGNILSCKVVCDENG-SKGYGFVHFETQEAVERAIEKMSGML 117
Query: 176 LNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRV 235
LN VFVG+F RKERE ELG +AK FTNVYIKNFGED +DE LK++F +G +V
Sbjct: 118 LNDFKVFVGQFKSRKEREAELGARAKEFTNVYIKNFGEDMDDEHLKDLFGKFGPALRVKV 177
Query: 236 MNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAER 284
M ++ GKS+GFGFV++E E A+KAV NGKE++GK +Y+GRAQKK E+
Sbjct: 178 MTDESGKSKGFGFVSFERHEDAQKAVNEMNGKELNGKQIYIGRAQKKVEQ 227
Score = 77.8 bits (190), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 100/188 (53%), Gaps = 16/188 (8%)
Query: 149 NSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYI 208
+S GY +V F+ ++++ +N ++ K V I + + L K+++ +N++I
Sbjct: 5 HSLGYTYVDFQKPTDMERALDTMNFDVIKGKPVR----IMWSQHDPSL-HKSEV-SNIFI 58
Query: 209 KNFGEDFNDEKLKEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEV 268
KN G+ +++ L + F +G I S +V+ ++ S+G+GFV +E+ E E+A++ +G +
Sbjct: 59 KNLGKSIDNKALYDTFPAFGNILSCKVVCDENGSKGYGFVHFETQEAVERAIEKMSGMLL 118
Query: 269 DGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTP 328
+ ++VG+ + + ER EL R + N+Y+KN + +DDE L+ F
Sbjct: 119 NDFKVFVGQFKSRKEREAELGARAKEF----------TNVYIKNFGEDMDDEHLKDLFGK 168
Query: 329 FGTITSAK 336
FG K
Sbjct: 169 FGPALRVK 176
>gi|326511990|dbj|BAJ95976.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 530
Score = 291 bits (744), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 145/263 (55%), Positives = 194/263 (73%), Gaps = 3/263 (1%)
Query: 75 LDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAF 134
+D RA++ +NF L +PIR+M+S RDPS R+SG N+FIKNLDK+IDNK ++DTFSAF
Sbjct: 174 MDAARAMEALNFAPLNNKPIRVMYSNRDPSSRRSGSANIFIKNLDKTIDNKTLHDTFSAF 233
Query: 135 GSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREK 194
G+ILSCKVA D+ G SKG+GFV +E EE+A +++ +NGML+N K V+VG F+ ++ER+
Sbjct: 234 GAILSCKVAMDDIGQSKGFGFVQYEKEESAQSAMKSLNGMLINDKPVYVGPFLRKQERDN 293
Query: 195 ELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESP 253
+KAK F NV++KN E E L ++F YGTITS VM DGKSR FGFV +ESP
Sbjct: 294 S-SDKAK-FNNVFVKNLSESTTKEDLIKVFSEYGTITSAVVMIGMDGKSRCFGFVNFESP 351
Query: 254 EFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNL 313
+ A +AV+ NGK+++ K YVGRAQKK+ER +LKRRFE + ++YQG NLY+KNL
Sbjct: 352 DDAARAVEELNGKKINDKEWYVGRAQKKSEREMDLKRRFEQSMKDAADKYQGQNLYLKNL 411
Query: 314 DDSIDDERLRKEFTPFGTITSAK 336
DD I D++LR+ F+ FG ITS K
Sbjct: 412 DDGITDDQLRELFSNFGKITSCK 434
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 76/235 (32%), Positives = 133/235 (56%), Gaps = 15/235 (6%)
Query: 77 TERALDTMNFDALKGRPIRI----MWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFS 132
+ A+ ++N + +P+ + +RD S K+ NVF+KNL +S + + FS
Sbjct: 263 AQSAMKSLNGMLINDKPVYVGPFLRKQERDNSSDKAKFNNVFVKNLSESTTKEDLIKVFS 322
Query: 133 AFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKER 192
+G+I S V G S+ +GFV+FE+ + A +++E++NG +N K +VG+ + ER
Sbjct: 323 EYGTITSAVVMIGMDGKSRCFGFVNFESPDDAARAVEELNGKKINDKEWYVGRAQKKSER 382
Query: 193 EKELGEKAKLFT----------NVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGK 241
E +L + + N+Y+KN + D++L+E+F +G ITS ++M + +G
Sbjct: 383 EMDLKRRFEQSMKDAADKYQGQNLYLKNLDDGITDDQLRELFSNFGKITSCKIMRDQNGV 442
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLK 296
S+G GFV++ + E A +A+ NGK + GK LYV AQ+K ER L+ +F ++
Sbjct: 443 SKGSGFVSFSTREEASQALTEMNGKMISGKPLYVAFAQRKEERKAMLQAQFSQMR 497
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 71/227 (31%), Positives = 124/227 (54%), Gaps = 22/227 (9%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGN-SKGYGFVHFETEEAANKSIEK 170
++++ +L+ ++ + +Y+ FS G ++S +V +D S GY +V++ A +++E
Sbjct: 123 SLYVGDLEANVTDSQLYELFSQAGQVVSVRVCRDVNSRRSLGYAYVNYSNPMDAARAMEA 182
Query: 171 VNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTI 230
+N LN+K + V + R + G N++IKN + +++ L + F +G I
Sbjct: 183 LNFAPLNNKPIRV-MYSNRDPSSRRSGS-----ANIFIKNLDKTIDNKTLHDTFSAFGAI 236
Query: 231 TSYRV-MNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL- 288
S +V M++ G+S+GFGFV YE E A+ A+++ NG ++ K +YVG +K ER
Sbjct: 237 LSCKVAMDDIGQSKGFGFVQYEKEESAQSAMKSLNGMLINDKPVYVGPFLRKQERDNSSD 296
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSA 335
K +F N++VKNL +S E L K F+ +GTITSA
Sbjct: 297 KAKFN-------------NVFVKNLSESTTKEDLIKVFSEYGTITSA 330
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 64/135 (47%), Gaps = 18/135 (13%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMN--NDGKSRGFGFVAYESPEFAEKAVQ 261
T++Y+ + + D +L E+F G + S RV N +S G+ +V Y +P A +A++
Sbjct: 122 TSLYVGDLEANVTDSQLYELFSQAGQVVSVRVCRDVNSRRSLGYAYVNYSNPMDAARAME 181
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDER 321
A N ++ K + V + + R N+++KNLD +ID++
Sbjct: 182 ALNFAPLNNKPIRVMYSNRDPSS----------------RRSGSANIFIKNLDKTIDNKT 225
Query: 322 LRKEFTPFGTITSAK 336
L F+ FG I S K
Sbjct: 226 LHDTFSAFGAILSCK 240
>gi|224085256|ref|XP_002307525.1| predicted protein [Populus trichocarpa]
gi|222856974|gb|EEE94521.1| predicted protein [Populus trichocarpa]
Length = 614
Score = 290 bits (743), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 145/262 (55%), Positives = 185/262 (70%), Gaps = 3/262 (1%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D A++ +NF L G+ IRIM S RDPS+RKSG NVFIKNLD SIDNKA+ +TF++FG
Sbjct: 76 DAANAMELLNFTPLNGKAIRIMVSHRDPSMRKSGHANVFIKNLDTSIDNKALQETFASFG 135
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+LSCKVA D G SKGYGFV FE EEAA +I ++NGML+N K VFVG+F+ +ER +
Sbjct: 136 PVLSCKVAVDNNGQSKGYGFVQFENEEAAQSAINRLNGMLINDKEVFVGRFVRHQERIEA 195
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPE 254
G FTNVY+KN E +DE LK+ F YG+ITS VM + GKS+GFGFV ++SP+
Sbjct: 196 TGSPK--FTNVYVKNLSETTSDEDLKKFFSNYGSITSAIVMKDQSGKSKGFGFVNFQSPD 253
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A AV+ NG + K+ YVGRAQ+K ER ELK RFE + R + + NLY+KNLD
Sbjct: 254 SAAAAVEKLNGTTFNDKVWYVGRAQRKGEREAELKARFEQERNSRYEKLKAANLYLKNLD 313
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
D IDDE+L++ F+ FG+ITS K
Sbjct: 314 DKIDDEKLKELFSEFGSITSCK 335
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 80/202 (39%), Positives = 124/202 (61%), Gaps = 13/202 (6%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV++KNL ++ ++ + FS +GSI S V +D+ G SKG+GFV+F++ ++A ++EK+
Sbjct: 203 NVYVKNLSETTSDEDLKKFFSNYGSITSAIVMKDQSGKSKGFGFVNFQSPDSAAAAVEKL 262
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELG-----------EKAKLFTNVYIKNFGEDFNDEKL 220
NG N K+ +VG+ + ERE EL EK K N+Y+KN + +DEKL
Sbjct: 263 NGTTFNDKVWYVGRAQRKGEREAELKARFEQERNSRYEKLKA-ANLYLKNLDDKIDDEKL 321
Query: 221 KEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQ 279
KE+F +G+ITS +VM + G S+G GFVA+ +PE A +A+ NGK + K LYV AQ
Sbjct: 322 KELFSEFGSITSCKVMLDQQGLSKGSGFVAFSTPEEASRALNGMNGKMIGKKPLYVAVAQ 381
Query: 280 KKAERTQELKRRFEMLKIERLN 301
++ ER L+ F ++ L+
Sbjct: 382 RREERKARLQAHFTQIQAPGLS 403
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 126/226 (55%), Gaps = 20/226 (8%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSIEK 170
++++ +L+ +++ ++D FS ++S +V +D+ + S GY +V+F + A ++E
Sbjct: 24 SLYVGDLEHNVNEGQLFDLFSQVAQVVSIRVCRDQARRASLGYAYVNFSNPQDAANAMEL 83
Query: 171 VNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTI 230
+N LN K + I R+ + + NV+IKN +++ L+E F +G +
Sbjct: 84 LNFTPLNGKAI----RIMVSHRDPSMRKSGH--ANVFIKNLDTSIDNKALQETFASFGPV 137
Query: 231 TSYRV-MNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELK 289
S +V ++N+G+S+G+GFV +E+ E A+ A+ NG ++ K ++VGR + ER
Sbjct: 138 LSCKVAVDNNGQSKGYGFVQFENEEAAQSAINRLNGMLINDKEVFVGRFVRHQER----- 192
Query: 290 RRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSA 335
IE + N+YVKNL ++ DE L+K F+ +G+ITSA
Sbjct: 193 -------IEATGSPKFTNVYVKNLSETTSDEDLKKFFSNYGSITSA 231
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 61/97 (62%)
Query: 100 QRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFE 159
+R+ K N+++KNLD ID++ + + FS FGSI SCKV D+QG SKG GFV F
Sbjct: 294 ERNSRYEKLKAANLYLKNLDDKIDDEKLKELFSEFGSITSCKVMLDQQGLSKGSGFVAFS 353
Query: 160 TEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKEL 196
T E A++++ +NG ++ K ++V R+ER+ L
Sbjct: 354 TPEEASRALNGMNGKMIGKKPLYVAVAQRREERKARL 390
>gi|344304706|gb|EGW34938.1| hypothetical protein SPAPADRAFT_58066 [Spathaspora passalidarum
NRRL Y-27907]
Length = 508
Score = 290 bits (742), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 148/241 (61%), Positives = 192/241 (79%), Gaps = 1/241 (0%)
Query: 97 MWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFV 156
MWSQRDPS R+SG GN+FIKNL +IDNKA++DTFSAFG ILSCKVA D+ G SK +GFV
Sbjct: 1 MWSQRDPSSRRSGDGNIFIKNLHPAIDNKALHDTFSAFGKILSCKVATDDMGQSKCFGFV 60
Query: 157 HFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFN 216
H+ET EAA +IE VNGMLLN + V+VGK I +K+RE + E +TN+Y+KN +F+
Sbjct: 61 HYETAEAAEAAIENVNGMLLNDREVYVGKHISKKDRESKFEEMKANYTNIYVKNIDLEFS 120
Query: 217 DEKLKEMFEPYGTITS-YRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYV 275
DE+ +++F P+GTITS Y + DGKS+GFGFV YE+ E A KAV+ N KE++G+ +YV
Sbjct: 121 DEEFEKLFVPFGTITSIYLEKDQDGKSKGFGFVNYETHESAVKAVEELNDKEINGQKIYV 180
Query: 276 GRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSA 335
GRAQKK ER +ELK+++E ++ERL++YQGVNL+VKNLDDSID E+L +EF PFG+ITSA
Sbjct: 181 GRAQKKRERMEELKKQYESTRVERLSKYQGVNLFVKNLDDSIDSEKLEEEFKPFGSITSA 240
Query: 336 K 336
K
Sbjct: 241 K 241
Score = 134 bits (337), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 72/198 (36%), Positives = 125/198 (63%), Gaps = 11/198 (5%)
Query: 107 KSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANK 166
K+ N+++KN+D ++ F FG+I S + +D+ G SKG+GFV++ET E+A K
Sbjct: 104 KANYTNIYVKNIDLEFSDEEFEKLFVPFGTITSIYLEKDQDGKSKGFGFVNYETHESAVK 163
Query: 167 SIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFN 216
++E++N +N + ++VG+ ++ER +EL ++ + N+++KN + +
Sbjct: 164 AVEELNDKEINGQKIYVGRAQKKRERMEELKKQYESTRVERLSKYQGVNLFVKNLDDSID 223
Query: 217 DEKLKEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYV 275
EKL+E F+P+G+ITS +VM ++ GKS+GFGFV + SPE A KA+ N + + GK LYV
Sbjct: 224 SEKLEEEFKPFGSITSAKVMVDEAGKSKGFGFVCFSSPEEATKAITEMNQRMILGKPLYV 283
Query: 276 GRAQKKAERTQELKRRFE 293
AQ+K R +L+++ +
Sbjct: 284 ALAQRKDVRRSQLEQQIQ 301
>gi|301120388|ref|XP_002907921.1| polyadenylate-binding protein 1-B [Phytophthora infestans T30-4]
gi|262102952|gb|EEY61004.1| polyadenylate-binding protein 1-B [Phytophthora infestans T30-4]
Length = 640
Score = 289 bits (740), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 154/270 (57%), Positives = 193/270 (71%), Gaps = 14/270 (5%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D ERALDTMNF ++KG P RIMWSQRDPSLRKSGVGN+F+KNLD SIDNKA+YDTFS FG
Sbjct: 98 DAERALDTMNFTSIKGVPCRIMWSQRDPSLRKSGVGNIFVKNLDTSIDNKALYDTFSLFG 157
Query: 136 SILSCKVA-QDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREK 194
+ILSCKVA + GNSKGYG+VH+ET EAA ++I K+NGML+ VFVG+F R++R
Sbjct: 158 NILSCKVAIEHTTGNSKGYGYVHYETAEAATEAIAKINGMLIAGTEVFVGQFQKRQDR-- 215
Query: 195 ELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMN---NDGKSRGFGFVAYE 251
A +TN Y+KN + D L + FEP+G + S VM N +RGFGFV YE
Sbjct: 216 ---PDADDWTNCYVKNIPTQWTDADLLKEFEPFGKVLSAVVMKDNANPDHNRGFGFVNYE 272
Query: 252 SPEFAEKAVQAWNGKEVDG-----KILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGV 306
+ A KAV A NGK +YVG+AQK++ER +EL+ +FE LK+ER+N+YQGV
Sbjct: 273 ESDAAHKAVDALNGKSYPAGEGLDTEMYVGKAQKRSERERELRNKFEQLKMERINKYQGV 332
Query: 307 NLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
NLYVKNLDD + D+ LR+ F GTITS++
Sbjct: 333 NLYVKNLDDQLSDDELREAFAECGTITSSR 362
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 73/197 (37%), Positives = 115/197 (58%), Gaps = 20/197 (10%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQG--NSKGYGFVHFETEEAANKSIE 169
N ++KN+ + + F FG +LS V +D +++G+GFV++E +AA+K+++
Sbjct: 223 NCYVKNIPTQWTDADLLKEFEPFGKVLSAVVMKDNANPDHNRGFGFVNYEESDAAHKAVD 282
Query: 170 KVNGML------LNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGE 213
+NG L++++ +VGK R ERE+EL K + N+Y+KN +
Sbjct: 283 ALNGKSYPAGEGLDTEM-YVGKAQKRSERERELRNKFEQLKMERINKYQGVNLYVKNLDD 341
Query: 214 DFNDEKLKEMFEPYGTITSYRVMNN-DGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKI 272
+D++L+E F GTITS RVM + +G SRGFGFV + +PE A KAV NGK + GK
Sbjct: 342 QLSDDELREAFAECGTITSSRVMRDPNGNSRGFGFVCFSTPEEANKAVAEMNGKLISGKP 401
Query: 273 LYVGRAQKKAERTQELK 289
+YV AQ+K R +L+
Sbjct: 402 VYVALAQRKEVRRAQLE 418
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 110/229 (48%), Gaps = 24/229 (10%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
++++ ++ + +++ F+A G + S +V +D S GY +V+F A +++
Sbjct: 44 TASLYVGDIHPDVTEALLFEIFNAVGPVASIRVCRDAVTRRSLGYAYVNFHNVADAERAL 103
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N + I V I +R+ L + N+++KN +++ L + F +G
Sbjct: 104 DTMN----FTSIKGVPCRIMWSQRDPSLRKSG--VGNIFVKNLDTSIDNKALYDTFSLFG 157
Query: 229 TITSYRVM--NNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQ 286
I S +V + G S+G+G+V YE+ E A +A+ NG + G ++VG+ QK+ +R
Sbjct: 158 NILSCKVAIEHTTGNSKGYGYVHYETAEAATEAIAKINGMLIAGTEVFVGQFQKRQDRP- 216
Query: 287 ELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSA 335
+ N YVKN+ D L KEF PFG + SA
Sbjct: 217 --------------DADDWTNCYVKNIPTQWTDADLLKEFEPFGKVLSA 251
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 61/136 (44%), Gaps = 20/136 (14%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQ 261
++Y+ + D + L E+F G + S RV + +S G+ +V + + AE+A+
Sbjct: 45 ASLYVGDIHPDVTEALLFEIFNAVGPVASIRVCRDAVTRRSLGYAYVNFHNVADAERALD 104
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGV-NLYVKNLDDSIDDE 320
N + G + +Q+ R GV N++VKNLD SID++
Sbjct: 105 TMNFTSIKGVPCRIMWSQRDPSL-----------------RKSGVGNIFVKNLDTSIDNK 147
Query: 321 RLRKEFTPFGTITSAK 336
L F+ FG I S K
Sbjct: 148 ALYDTFSLFGNILSCK 163
>gi|222629159|gb|EEE61291.1| hypothetical protein OsJ_15377 [Oryza sativa Japonica Group]
Length = 613
Score = 289 bits (740), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 146/274 (53%), Positives = 199/274 (72%), Gaps = 8/274 (2%)
Query: 69 LGQPYM-----LDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSID 123
G+PY+ +D RAL+ +NF L G+PIR+M+S RDPS R+SG N+FIKNLDK+ID
Sbjct: 79 FGKPYVNFNNPVDAARALELLNFAPLNGKPIRVMYSNRDPSSRRSGSANIFIKNLDKAID 138
Query: 124 NKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFV 183
+K ++DTFSAFG+ILSCKVA DE G SKG+GFV ++ EAA +I+ +NGML+N K V+V
Sbjct: 139 HKTLHDTFSAFGNILSCKVATDEMGQSKGFGFVQYDKGEAAQSAIKSLNGMLINDKPVYV 198
Query: 184 GKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKS 242
G F+ ++ERE + +K K F NV++KN E E L ++F YG ITS +M DGKS
Sbjct: 199 GPFLRKQERENSV-DKTK-FNNVFVKNLSESTTKEDLVKIFGAYGNITSAVIMVGMDGKS 256
Query: 243 RGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNR 302
R FGF+ ++SP+ A +AV+ NGK+++ K YVGRAQKK+ER ELKRRFE + ++
Sbjct: 257 RCFGFINFKSPDDAARAVEELNGKKINDKEWYVGRAQKKSEREIELKRRFEQSMKDAADK 316
Query: 303 YQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
YQG+NLY+KNLDDSI D++L + F+ +G ITS K
Sbjct: 317 YQGLNLYMKNLDDSIGDDQLCELFSNYGKITSCK 350
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 74/231 (32%), Positives = 130/231 (56%), Gaps = 15/231 (6%)
Query: 77 TERALDTMNFDALKGRPIRI----MWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFS 132
+ A+ ++N + +P+ + +R+ S+ K+ NVF+KNL +S + + F
Sbjct: 179 AQSAIKSLNGMLINDKPVYVGPFLRKQERENSVDKTKFNNVFVKNLSESTTKEDLVKIFG 238
Query: 133 AFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKER 192
A+G+I S + G S+ +GF++F++ + A +++E++NG +N K +VG+ + ER
Sbjct: 239 AYGNITSAVIMVGMDGKSRCFGFINFKSPDDAARAVEELNGKKINDKEWYVGRAQKKSER 298
Query: 193 EKELGEKAKLFT----------NVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGK 241
E EL + + N+Y+KN + D++L E+F YG ITS ++M + +G
Sbjct: 299 EIELKRRFEQSMKDAADKYQGLNLYMKNLDDSIGDDQLCELFSNYGKITSCKIMRDANGV 358
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRF 292
S+G GFVA+ + E A +A+ NGK + GK LYV AQ+K +R L+ F
Sbjct: 359 SKGSGFVAFSTREEASQALTEMNGKMISGKPLYVAFAQRKEDRKAMLQPGF 409
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 119/227 (52%), Gaps = 23/227 (10%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQD-EQGNSKGYGFVHFETEEAANKSIEK 170
++++ +L+ S+ + +Y+ F G ++S +V +D G S G +V+F A +++E
Sbjct: 40 SLYVGDLEASVTDSQLYE-FQPGGQVMSVRVCRDIRLGRSFGKPYVNFNNPVDAARALEL 98
Query: 171 VNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTI 230
+N LN K + V + R + G N++IKN + + + L + F +G I
Sbjct: 99 LNFAPLNGKPIRV-MYSNRDPSSRRSGS-----ANIFIKNLDKAIDHKTLHDTFSAFGNI 152
Query: 231 TSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL- 288
S +V ++ G+S+GFGFV Y+ E A+ A+++ NG ++ K +YVG +K ER +
Sbjct: 153 LSCKVATDEMGQSKGFGFVQYDKGEAAQSAIKSLNGMLINDKPVYVGPFLRKQERENSVD 212
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSA 335
K +F N++VKNL +S E L K F +G ITSA
Sbjct: 213 KTKFN-------------NVFVKNLSESTTKEDLVKIFGAYGNITSA 246
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 62/134 (46%), Gaps = 19/134 (14%)
Query: 205 NVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND--GKSRGFGFVAYESPEFAEKAVQA 262
++Y+ + D +L E F+P G + S RV + G+S G +V + +P A +A++
Sbjct: 40 SLYVGDLEASVTDSQLYE-FQPGGQVMSVRVCRDIRLGRSFGKPYVNFNNPVDAARALEL 98
Query: 263 WNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERL 322
N ++GK + V + + R N+++KNLD +ID + L
Sbjct: 99 LNFAPLNGKPIRVMYSNRDPSS----------------RRSGSANIFIKNLDKAIDHKTL 142
Query: 323 RKEFTPFGTITSAK 336
F+ FG I S K
Sbjct: 143 HDTFSAFGNILSCK 156
>gi|302844953|ref|XP_002954016.1| hypothetical protein VOLCADRAFT_82578 [Volvox carteri f.
nagariensis]
gi|300260828|gb|EFJ45045.1| hypothetical protein VOLCADRAFT_82578 [Volvox carteri f.
nagariensis]
Length = 620
Score = 289 bits (739), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 142/261 (54%), Positives = 186/261 (71%), Gaps = 5/261 (1%)
Query: 77 TERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGS 136
ERA++T+N+ L G+P+RIMWS RDPS RKSGVGN+FIKNLDKSID KA++DTFSAFG
Sbjct: 78 AERAMETLNYHVLNGKPMRIMWSHRDPSARKSGVGNIFIKNLDKSIDAKALHDTFSAFGK 137
Query: 137 ILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKEL 196
ILSCKVA D G SKGYGFVHFE + AA+++I+ VN + KIV+VG F R +R
Sbjct: 138 ILSCKVATDANGVSKGYGFVHFEDQAAADRAIQTVNQKEIEGKIVYVGPFQKRADRP--- 194
Query: 197 GEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEF 255
+ ++TNV++KN + D++L +M +G +TS VM ++ G S+GFGF+ ++ E
Sbjct: 195 -QGKDVYTNVFVKNLPAELGDDELSKMATEFGEVTSAVVMKDEKGSSKGFGFINFKDAEC 253
Query: 256 AEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDD 315
A K V+A N KE+ GK+LY GRAQKK ER L+++ E K ER +YQG+NLYVKNL D
Sbjct: 254 AAKCVEALNDKEIGGKVLYAGRAQKKTEREAMLRQKVEESKQERYLKYQGMNLYVKNLAD 313
Query: 316 SIDDERLRKEFTPFGTITSAK 336
+DD+ LR FT GTITS K
Sbjct: 314 EVDDDALRDLFTSCGTITSCK 334
Score = 134 bits (336), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 79/226 (34%), Positives = 129/226 (57%), Gaps = 13/226 (5%)
Query: 77 TERALDTMNFDALKGRPIRIMWSQR--DPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAF 134
+RA+ T+N ++G+ + + Q+ D K NVF+KNL + + + + F
Sbjct: 165 ADRAIQTVNQKEIEGKIVYVGPFQKRADRPQGKDVYTNVFVKNLPAELGDDELSKMATEF 224
Query: 135 GSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREK 194
G + S V +DE+G+SKG+GF++F+ E A K +E +N + K+++ G+ + ERE
Sbjct: 225 GEVTSAVVMKDEKGSSKGFGFINFKDAECAAKCVEALNDKEIGGKVLYAGRAQKKTEREA 284
Query: 195 ELGEKAK----------LFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKSR 243
L +K + N+Y+KN ++ +D+ L+++F GTITS +VM + GKS+
Sbjct: 285 MLRQKVEESKQERYLKYQGMNLYVKNLADEVDDDALRDLFTSCGTITSCKVMKDTSGKSK 344
Query: 244 GFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELK 289
GFGFV + S + A +AV NGK V GK LYV AQ+K R +L+
Sbjct: 345 GFGFVCFTSHDEATRAVTEMNGKMVKGKPLYVALAQRKDVRRAQLE 390
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 125/229 (54%), Gaps = 25/229 (10%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFET---EEAANKS 167
++++ +L+K + +++ FS+ G + S +V +D S GY +V++ + +AA ++
Sbjct: 22 SLYVGDLEKDVTEAQLFELFSSVGPVASIRVCRDAVTRRSLGYAYVNYNSALDPQAAERA 81
Query: 168 IEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPY 227
+E +N +LN K + + + R ++ G N++IKN + + + L + F +
Sbjct: 82 METLNYHVLNGKPMRI-MWSHRDPSARKSG-----VGNIFIKNLDKSIDAKALHDTFSAF 135
Query: 228 GTITSYRVMNN-DGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQ 286
G I S +V + +G S+G+GFV +E A++A+Q N KE++GKI+YVG QK+A+R Q
Sbjct: 136 GKILSCKVATDANGVSKGYGFVHFEDQAAADRAIQTVNQKEIEGKIVYVGPFQKRADRPQ 195
Query: 287 ELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSA 335
+ N++VKNL + D+ L K T FG +TSA
Sbjct: 196 --------------GKDVYTNVFVKNLPAELGDDELSKMATEFGEVTSA 230
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 68/139 (48%), Gaps = 23/139 (16%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYES---PEFAEK 258
+++Y+ + +D + +L E+F G + S RV + +S G+ +V Y S P+ AE+
Sbjct: 21 SSLYVGDLEKDVTEAQLFELFSSVGPVASIRVCRDAVTRRSLGYAYVNYNSALDPQAAER 80
Query: 259 AVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGV-NLYVKNLDDSI 317
A++ N ++GK + + + + R GV N+++KNLD SI
Sbjct: 81 AMETLNYHVLNGKPMRIMWSHRDPSA-----------------RKSGVGNIFIKNLDKSI 123
Query: 318 DDERLRKEFTPFGTITSAK 336
D + L F+ FG I S K
Sbjct: 124 DAKALHDTFSAFGKILSCK 142
>gi|198422488|ref|XP_002121866.1| PREDICTED: similar to poly(A) binding protein, cytoplasmic 4
(inducible form) [Ciona intestinalis]
Length = 270
Score = 289 bits (739), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 143/209 (68%), Positives = 171/209 (81%), Gaps = 4/209 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMN+D +KGRPIRIMWSQRDPSLRKSGVGN+FIKNLDKSI
Sbjct: 54 GYAYVNFQQP--ADAERALDTMNYDPIKGRPIRIMWSQRDPSLRKSGVGNIFIKNLDKSI 111
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFSAFG+ILSCKV+ +E G SKGYGFVHFETEEA ++IEKVNGMLLN K VF
Sbjct: 112 DNKALYDTFSAFGNILSCKVSCNENG-SKGYGFVHFETEEAGIRAIEKVNGMLLNDKKVF 170
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGK 241
VGKF+ R ER K++GE+ + FTNVYIKNFG+ ++++ L+ MFE YG + S VM + DG
Sbjct: 171 VGKFLTRSERIKKMGERVRQFTNVYIKNFGDKYDEKTLQVMFEKYGVVKSVAVMRDRDGN 230
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDG 270
SRGFGFVAY+S E A+ AV+A NG+E++G
Sbjct: 231 SRGFGFVAYDSHEEAQAAVEAMNGQEIEG 259
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 117/227 (51%), Gaps = 17/227 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + +Y+ FS G +LS +V +D S GY +V+F+ A +++
Sbjct: 11 MASLYVGDLHLDVTEAMLYEKFSQAGPVLSIRVCRDVITRRSLGYAYVNFQQPADAERAL 70
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N + + + I +R+ L + N++IKN + +++ L + F +G
Sbjct: 71 DTMNYDPIKGRPIR----IMWSQRDPSLRKSG--VGNIFIKNLDKSIDNKALYDTFSAFG 124
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S +V N+ S+G+GFV +E+ E +A++ NG ++ K ++VG+ ++ER +++
Sbjct: 125 NILSCKVSCNENGSKGYGFVHFETEEAGIRAIEKVNGMLLNDKKVFVGKFLTRSERIKKM 184
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSA 335
R Q N+Y+KN D D++ L+ F +G + S
Sbjct: 185 GERVR----------QFTNVYIKNFGDKYDEKTLQVMFEKYGVVKSV 221
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 63/136 (46%), Gaps = 20/136 (14%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQ 261
++Y+ + D + L E F G + S RV + +S G+ +V ++ P AE+A+
Sbjct: 12 ASLYVGDLHLDVTEAMLYEKFSQAGPVLSIRVCRDVITRRSLGYAYVNFQQPADAERALD 71
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGV-NLYVKNLDDSIDDE 320
N + G+ + + +Q+ R GV N+++KNLD SID++
Sbjct: 72 TMNYDPIKGRPIRIMWSQRDPSL-----------------RKSGVGNIFIKNLDKSIDNK 114
Query: 321 RLRKEFTPFGTITSAK 336
L F+ FG I S K
Sbjct: 115 ALYDTFSAFGNILSCK 130
>gi|301125993|ref|XP_002909814.1| polyadenylate-binding protein, putative [Phytophthora infestans
T30-4]
gi|262103703|gb|EEY61755.1| polyadenylate-binding protein, putative [Phytophthora infestans
T30-4]
Length = 587
Score = 289 bits (739), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 154/270 (57%), Positives = 192/270 (71%), Gaps = 14/270 (5%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D ERALDTMNF ++KG P RIMWSQRDPSLRKSGVGN+F+KNLD SIDNKA+YDTFS FG
Sbjct: 44 DAERALDTMNFTSIKGVPCRIMWSQRDPSLRKSGVGNIFVKNLDTSIDNKALYDTFSLFG 103
Query: 136 SILSCKVA-QDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREK 194
+ILSCKVA + GNSKGYG+VH+ET EAA ++I K+NGML+ VFVG F R++R
Sbjct: 104 NILSCKVAIEHTTGNSKGYGYVHYETAEAATEAIAKINGMLIAGTEVFVGHFQKRQDR-- 161
Query: 195 ELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMN---NDGKSRGFGFVAYE 251
A +TN Y+KN + D L + FEP+G + S VM N +RGFGFV YE
Sbjct: 162 ---PDADDWTNCYVKNIPTQWTDADLLKEFEPFGKVLSAVVMKDNANPDHNRGFGFVNYE 218
Query: 252 SPEFAEKAVQAWNGKEVDG-----KILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGV 306
+ A KAV A NGK +YVG+AQK++ER +EL+ +FE LK+ER+N+YQGV
Sbjct: 219 ESDAAHKAVDALNGKSYPAGEGLDTEMYVGKAQKRSERERELRNKFEQLKMERINKYQGV 278
Query: 307 NLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
NLYVKNLDD + D+ LR+ F GTITS++
Sbjct: 279 NLYVKNLDDQLSDDELREAFAECGTITSSR 308
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/197 (37%), Positives = 115/197 (58%), Gaps = 20/197 (10%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQG--NSKGYGFVHFETEEAANKSIE 169
N ++KN+ + + F FG +LS V +D +++G+GFV++E +AA+K+++
Sbjct: 169 NCYVKNIPTQWTDADLLKEFEPFGKVLSAVVMKDNANPDHNRGFGFVNYEESDAAHKAVD 228
Query: 170 KVNGML------LNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGE 213
+NG L++++ +VGK R ERE+EL K + N+Y+KN +
Sbjct: 229 ALNGKSYPAGEGLDTEM-YVGKAQKRSERERELRNKFEQLKMERINKYQGVNLYVKNLDD 287
Query: 214 DFNDEKLKEMFEPYGTITSYRVMNN-DGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKI 272
+D++L+E F GTITS RVM + +G SRGFGFV + +PE A KAV NGK + GK
Sbjct: 288 QLSDDELREAFAECGTITSSRVMRDPNGNSRGFGFVCFSTPEEANKAVAEMNGKLISGKP 347
Query: 273 LYVGRAQKKAERTQELK 289
+YV AQ+K R +L+
Sbjct: 348 VYVALAQRKEVRRAQLE 364
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 97/206 (47%), Gaps = 24/206 (11%)
Query: 133 AFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKE 191
A G + S +V +D S GY +V+F A ++++ +N + I V I +
Sbjct: 13 AVGPVASIRVCRDAVTRRSLGYAYVNFHNVADAERALDTMN----FTSIKGVPCRIMWSQ 68
Query: 192 REKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM--NNDGKSRGFGFVA 249
R+ L + N+++KN +++ L + F +G I S +V + G S+G+G+V
Sbjct: 69 RDPSLRKSG--VGNIFVKNLDTSIDNKALYDTFSLFGNILSCKVAIEHTTGNSKGYGYVH 126
Query: 250 YESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLY 309
YE+ E A +A+ NG + G ++VG QK+ +R + N Y
Sbjct: 127 YETAEAATEAIAKINGMLIAGTEVFVGHFQKRQDRP---------------DADDWTNCY 171
Query: 310 VKNLDDSIDDERLRKEFTPFGTITSA 335
VKN+ D L KEF PFG + SA
Sbjct: 172 VKNIPTQWTDADLLKEFEPFGKVLSA 197
>gi|308806325|ref|XP_003080474.1| polyadenylate-binding protein, putative / PABP, putative (ISS)
[Ostreococcus tauri]
gi|116058934|emb|CAL54641.1| polyadenylate-binding protein, putative / PABP, putative (ISS)
[Ostreococcus tauri]
Length = 504
Score = 288 bits (737), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 143/262 (54%), Positives = 186/262 (70%), Gaps = 4/262 (1%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D A+D +NF + G+PIR+++SQRDP++R+SGVGN+FIKNLDK+IDNKA+ DTF+ FG
Sbjct: 85 DAAHAIDVLNFQVINGKPIRVLYSQRDPAVRRSGVGNIFIKNLDKAIDNKALLDTFAQFG 144
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+I S KVA D GNSKGYGFV FET EAA +I+ VNGM LN K V+VG F R +R +
Sbjct: 145 TITSAKVAMDSAGNSKGYGFVQFETAEAAQAAIDNVNGMELNDKQVYVGPFQRRADRSTQ 204
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGKSRGFGFVAYESPE 254
K F NVY+KN E+ +DEKL+E F +G +TS +M + +GKS+GFGFV +ESPE
Sbjct: 205 GEAK---FNNVYVKNLSENLSDEKLREKFAEHGAVTSCVIMKDEEGKSKGFGFVCFESPE 261
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A AV+ +G D K V RAQKKAER ELK +FE + ER+ + G NLY+KNL+
Sbjct: 262 GAASAVENLDGYTEDEKTWVVCRAQKKAEREAELKAKFEAERRERMEKMAGANLYIKNLE 321
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
+ DDE+LR+ F FGTITS +
Sbjct: 322 EGTDDEKLRELFNEFGTITSCR 343
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 78/185 (42%), Positives = 112/185 (60%), Gaps = 15/185 (8%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV++KNL +++ ++ + + F+ G++ SC + +DE+G SKG+GFV FE+ E A ++E +
Sbjct: 211 NVYVKNLSENLSDEKLREKFAEHGAVTSCVIMKDEEGKSKGFGFVCFESPEGAASAVENL 270
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKL------------FTNVYIKNFGEDFNDEK 219
+G + K V + + ERE EL KAK N+YIKN E +DEK
Sbjct: 271 DGYTEDEKTWVVCRAQKKAEREAEL--KAKFEAERRERMEKMAGANLYIKNLEEGTDDEK 328
Query: 220 LKEMFEPYGTITSYRVMNN-DGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRA 278
L+E+F +GTITS RVM + G SRG FVA+ SP+ A +AV NGK V K LYV A
Sbjct: 329 LRELFNEFGTITSCRVMRDASGASRGSAFVAFSSPDEATRAVTEMNGKMVGAKPLYVALA 388
Query: 279 QKKAE 283
Q+K E
Sbjct: 389 QRKEE 393
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 70/226 (30%), Positives = 131/226 (57%), Gaps = 21/226 (9%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSIEK 170
++++ +L+ S+ +Y+ FS+ G ++S +V +D S GY +V+F++ A +I+
Sbjct: 33 SLYVGDLETSVTEAQLYEKFSSIGPVVSIRVCRDLITRRSLGYAYVNFQSSSDAAHAIDV 92
Query: 171 VNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTI 230
+N ++N K + V + R + G N++IKN + +++ L + F +GTI
Sbjct: 93 LNFQVINGKPIRV-LYSQRDPAVRRSG-----VGNIFIKNLDKAIDNKALLDTFAQFGTI 146
Query: 231 TSYRV-MNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELK 289
TS +V M++ G S+G+GFV +E+ E A+ A+ NG E++ K +YVG Q++A+R+ + +
Sbjct: 147 TSAKVAMDSAGNSKGYGFVQFETAEAAQAAIDNVNGMELNDKQVYVGPFQRRADRSTQGE 206
Query: 290 RRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSA 335
+F N+YVKNL +++ DE+LR++F G +TS
Sbjct: 207 AKFN-------------NVYVKNLSENLSDEKLREKFAEHGAVTSC 239
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 58/93 (62%), Gaps = 1/93 (1%)
Query: 99 SQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHF 158
++R + K N++IKNL++ D++ + + F+ FG+I SC+V +D G S+G FV F
Sbjct: 301 AERRERMEKMAGANLYIKNLEEGTDDEKLRELFNEFGTITSCRVMRDASGASRGSAFVAF 360
Query: 159 ETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKE 191
+ + A +++ ++NG ++ +K ++V RKE
Sbjct: 361 SSPDEATRAVTEMNGKMVGAKPLYVA-LAQRKE 392
>gi|357164563|ref|XP_003580095.1| PREDICTED: polyadenylate-binding protein 2-like [Brachypodium
distachyon]
Length = 661
Score = 288 bits (736), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 142/263 (53%), Positives = 191/263 (72%), Gaps = 3/263 (1%)
Query: 75 LDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAF 134
+D RAL+ +NF L +PIR+M+S RDPS R+SG N+FIKNLDK+IDNK ++DTFSAF
Sbjct: 89 MDAARALEMLNFVPLNNKPIRVMYSNRDPSSRRSGSANIFIKNLDKTIDNKTLHDTFSAF 148
Query: 135 GSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREK 194
G+ILSCKVA D+ G SKG+GFV +E EE A +++ +NGML+N K V+VG F+ ++ER+
Sbjct: 149 GAILSCKVATDDMGQSKGFGFVQYEKEEFAQSAMKSLNGMLINDKPVYVGPFLRKQERDN 208
Query: 195 ELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESP 253
+KA+ F NV++KN E E L ++F YG ITS VM DGKSR FGF+ +ESP
Sbjct: 209 SF-DKAR-FNNVFVKNLSESTTKEDLVKIFSEYGNITSAVVMVGTDGKSRCFGFINFESP 266
Query: 254 EFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNL 313
+ A +AV+ NGK+++ K Y GRAQKK+ER +LKRRFE + ++YQG NLY+KNL
Sbjct: 267 DDAVRAVEELNGKKINDKEWYCGRAQKKSEREMDLKRRFEQSMKDAADKYQGQNLYLKNL 326
Query: 314 DDSIDDERLRKEFTPFGTITSAK 336
DD I D++LR+ F+ FG ITS K
Sbjct: 327 DDGISDDQLRELFSTFGKITSCK 349
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/235 (32%), Positives = 133/235 (56%), Gaps = 15/235 (6%)
Query: 77 TERALDTMNFDALKGRPIRI----MWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFS 132
+ A+ ++N + +P+ + +RD S K+ NVF+KNL +S + + FS
Sbjct: 178 AQSAMKSLNGMLINDKPVYVGPFLRKQERDNSFDKARFNNVFVKNLSESTTKEDLVKIFS 237
Query: 133 AFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKER 192
+G+I S V G S+ +GF++FE+ + A +++E++NG +N K + G+ + ER
Sbjct: 238 EYGNITSAVVMVGTDGKSRCFGFINFESPDDAVRAVEELNGKKINDKEWYCGRAQKKSER 297
Query: 193 EKELGEKAKLFT----------NVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGK 241
E +L + + N+Y+KN + +D++L+E+F +G ITS +VM + +G
Sbjct: 298 EMDLKRRFEQSMKDAADKYQGQNLYLKNLDDGISDDQLRELFSTFGKITSCKVMRDQNGV 357
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLK 296
S+G GFVA+ + E A +A+ NGK + GK LYV AQ+K ER L+ +F ++
Sbjct: 358 SKGSGFVAFSTREEASQAITEMNGKMLSGKPLYVAFAQRKEERKAMLQAQFSQMR 412
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/227 (32%), Positives = 124/227 (54%), Gaps = 22/227 (9%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGN-SKGYGFVHFETEEAANKSIEK 170
++++ +L+ S+ + +Y+ FS G ++S +V +D S GY +V+F A +++E
Sbjct: 38 SLYVGDLEASVTDSQLYELFSQAGQVVSVRVCRDVNSRRSLGYAYVNFSNPMDAARALEM 97
Query: 171 VNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTI 230
+N + LN+K + V + R + G N++IKN + +++ L + F +G I
Sbjct: 98 LNFVPLNNKPIRV-MYSNRDPSSRRSGS-----ANIFIKNLDKTIDNKTLHDTFSAFGAI 151
Query: 231 TSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL- 288
S +V +D G+S+GFGFV YE EFA+ A+++ NG ++ K +YVG +K ER
Sbjct: 152 LSCKVATDDMGQSKGFGFVQYEKEEFAQSAMKSLNGMLINDKPVYVGPFLRKQERDNSFD 211
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSA 335
K RF N++VKNL +S E L K F+ +G ITSA
Sbjct: 212 KARFN-------------NVFVKNLSESTTKEDLVKIFSEYGNITSA 245
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 62/135 (45%), Gaps = 18/135 (13%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMN--NDGKSRGFGFVAYESPEFAEKAVQ 261
T++Y+ + D +L E+F G + S RV N +S G+ +V + +P A +A++
Sbjct: 37 TSLYVGDLEASVTDSQLYELFSQAGQVVSVRVCRDVNSRRSLGYAYVNFSNPMDAARALE 96
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDER 321
N ++ K + V + + R N+++KNLD +ID++
Sbjct: 97 MLNFVPLNNKPIRVMYSNRDPSS----------------RRSGSANIFIKNLDKTIDNKT 140
Query: 322 LRKEFTPFGTITSAK 336
L F+ FG I S K
Sbjct: 141 LHDTFSAFGAILSCK 155
>gi|355709043|gb|AES03462.1| poly binding protein, cytoplasmic 1 [Mustela putorius furo]
Length = 230
Score = 287 bits (735), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 143/207 (69%), Positives = 169/207 (81%), Gaps = 4/207 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD +KG+P+RIMWSQRDPSLRKSGVGN+FIKNLDKSI
Sbjct: 27 GYAYVNFQQP--ADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSI 84
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFSAFG+ILSCKV DE G SKGYGFVHFET+EAA ++IEK+NGMLLN + VF
Sbjct: 85 DNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVF 143
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GK 241
VG+F RKERE ELG +AK FTNVYIKNFGED +DE+LK++F +G S +VM ++ GK
Sbjct: 144 VGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGK 203
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEV 268
S+GFGFV++E E A+KAV NGKE+
Sbjct: 204 SKGFGFVSFERHEDAQKAVDEMNGKEL 230
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 114/211 (54%), Gaps = 17/211 (8%)
Query: 127 MYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGK 185
+Y+ FS G ILS +V +D S GY +V+F+ A ++++ +N ++ K V
Sbjct: 1 LYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPVR--- 57
Query: 186 FIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDGKSRGF 245
I +R+ L + N++IKN + +++ L + F +G I S +V+ ++ S+G+
Sbjct: 58 -IMWSQRDPSLRKSG--VGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGY 114
Query: 246 GFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQG 305
GFV +E+ E AE+A++ NG ++ + ++VGR + + ER EL R +
Sbjct: 115 GFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEF---------- 164
Query: 306 VNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
N+Y+KN + +DDERL+ F FG S K
Sbjct: 165 TNVYIKNFGEDMDDERLKDLFGKFGPALSVK 195
>gi|115459296|ref|NP_001053248.1| Os04g0504800 [Oryza sativa Japonica Group]
gi|32490269|emb|CAE05558.1| OSJNBb0116K07.11 [Oryza sativa Japonica Group]
gi|113564819|dbj|BAF15162.1| Os04g0504800 [Oryza sativa Japonica Group]
gi|215695125|dbj|BAG90316.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 659
Score = 287 bits (735), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 143/263 (54%), Positives = 194/263 (73%), Gaps = 3/263 (1%)
Query: 75 LDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAF 134
+D RAL+ +NF L G+PIR+M+S RDPS R+SG N+FIKNLDK+ID+K ++DTFSAF
Sbjct: 91 VDAARALELLNFAPLNGKPIRVMYSNRDPSSRRSGSANIFIKNLDKAIDHKTLHDTFSAF 150
Query: 135 GSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREK 194
G+ILSCKVA DE G SKG+GFV ++ EAA +I+ +NGML+N K V+VG F+ ++ERE
Sbjct: 151 GNILSCKVATDEMGQSKGFGFVQYDKGEAAQSAIKSLNGMLINDKPVYVGPFLRKQEREN 210
Query: 195 ELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESP 253
+ +K K F NV++KN E E L ++F YG ITS +M DGKSR FGF+ ++SP
Sbjct: 211 SV-DKTK-FNNVFVKNLSESTTKEDLVKIFGAYGNITSAVIMVGMDGKSRCFGFINFKSP 268
Query: 254 EFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNL 313
+ A +AV+ NGK+++ K YVGRAQKK+ER ELKRRFE + ++YQG+NLY+KNL
Sbjct: 269 DDAARAVEELNGKKINDKEWYVGRAQKKSEREIELKRRFEQSMKDAADKYQGLNLYMKNL 328
Query: 314 DDSIDDERLRKEFTPFGTITSAK 336
DDSI D++L + F+ +G ITS K
Sbjct: 329 DDSIGDDQLCELFSNYGKITSCK 351
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 74/235 (31%), Positives = 133/235 (56%), Gaps = 15/235 (6%)
Query: 77 TERALDTMNFDALKGRPIRI----MWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFS 132
+ A+ ++N + +P+ + +R+ S+ K+ NVF+KNL +S + + F
Sbjct: 180 AQSAIKSLNGMLINDKPVYVGPFLRKQERENSVDKTKFNNVFVKNLSESTTKEDLVKIFG 239
Query: 133 AFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKER 192
A+G+I S + G S+ +GF++F++ + A +++E++NG +N K +VG+ + ER
Sbjct: 240 AYGNITSAVIMVGMDGKSRCFGFINFKSPDDAARAVEELNGKKINDKEWYVGRAQKKSER 299
Query: 193 EKELGEKAKLFT----------NVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGK 241
E EL + + N+Y+KN + D++L E+F YG ITS ++M + +G
Sbjct: 300 EIELKRRFEQSMKDAADKYQGLNLYMKNLDDSIGDDQLCELFSNYGKITSCKIMRDANGV 359
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLK 296
S+G GFVA+ + E A +A+ NGK + GK LYV AQ+K +R L+ +F ++
Sbjct: 360 SKGSGFVAFSTREEASQALTEMNGKMISGKPLYVAFAQRKEDRKAMLQAQFSQVR 414
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 120/227 (52%), Gaps = 22/227 (9%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQD-EQGNSKGYGFVHFETEEAANKSIEK 170
++++ +L+ S+ + +Y+ FS G ++S +V +D S GY +V+F A +++E
Sbjct: 40 SLYVGDLEASVTDSQLYELFSQAGQVMSVRVCRDISSRRSLGYAYVNFNNPVDAARALEL 99
Query: 171 VNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTI 230
+N LN K + V + R + G N++IKN + + + L + F +G I
Sbjct: 100 LNFAPLNGKPIRV-MYSNRDPSSRRSGS-----ANIFIKNLDKAIDHKTLHDTFSAFGNI 153
Query: 231 TSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL- 288
S +V ++ G+S+GFGFV Y+ E A+ A+++ NG ++ K +YVG +K ER +
Sbjct: 154 LSCKVATDEMGQSKGFGFVQYDKGEAAQSAIKSLNGMLINDKPVYVGPFLRKQERENSVD 213
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSA 335
K +F N++VKNL +S E L K F +G ITSA
Sbjct: 214 KTKFN-------------NVFVKNLSESTTKEDLVKIFGAYGNITSA 247
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 61/134 (45%), Gaps = 18/134 (13%)
Query: 205 NVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQA 262
++Y+ + D +L E+F G + S RV + +S G+ +V + +P A +A++
Sbjct: 40 SLYVGDLEASVTDSQLYELFSQAGQVMSVRVCRDISSRRSLGYAYVNFNNPVDAARALEL 99
Query: 263 WNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERL 322
N ++GK + V + + R N+++KNLD +ID + L
Sbjct: 100 LNFAPLNGKPIRVMYSNRDPSS----------------RRSGSANIFIKNLDKAIDHKTL 143
Query: 323 RKEFTPFGTITSAK 336
F+ FG I S K
Sbjct: 144 HDTFSAFGNILSCK 157
>gi|218195166|gb|EEC77593.1| hypothetical protein OsI_16552 [Oryza sativa Indica Group]
Length = 659
Score = 287 bits (734), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 143/263 (54%), Positives = 194/263 (73%), Gaps = 3/263 (1%)
Query: 75 LDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAF 134
+D RAL+ +NF L G+PIR+M+S RDPS R+SG N+FIKNLDK+ID+K ++DTFSAF
Sbjct: 91 VDAARALELLNFAPLNGKPIRVMYSNRDPSSRRSGSANIFIKNLDKAIDHKTLHDTFSAF 150
Query: 135 GSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREK 194
G+ILSCKVA DE G SKG+GFV ++ EAA +I+ +NGML+N K V+VG F+ ++ERE
Sbjct: 151 GNILSCKVATDEMGQSKGFGFVQYDKGEAAQSAIKSLNGMLINDKPVYVGPFLRKQEREN 210
Query: 195 ELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESP 253
+ +K K F NV++KN E E L ++F YG ITS +M DGKSR FGF+ ++SP
Sbjct: 211 SV-DKTK-FNNVFVKNLSESTTKEDLVKIFGAYGNITSAVIMVGMDGKSRCFGFINFKSP 268
Query: 254 EFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNL 313
+ A +AV+ NGK+++ K YVGRAQKK+ER ELKRRFE + ++YQG+NLY+KNL
Sbjct: 269 DDAARAVEELNGKKINDKEWYVGRAQKKSEREIELKRRFEQSMKDAADKYQGLNLYMKNL 328
Query: 314 DDSIDDERLRKEFTPFGTITSAK 336
DDSI D++L + F+ +G ITS K
Sbjct: 329 DDSIGDDQLCELFSNYGKITSCK 351
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 74/235 (31%), Positives = 133/235 (56%), Gaps = 15/235 (6%)
Query: 77 TERALDTMNFDALKGRPIRI----MWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFS 132
+ A+ ++N + +P+ + +R+ S+ K+ NVF+KNL +S + + F
Sbjct: 180 AQSAIKSLNGMLINDKPVYVGPFLRKQERENSVDKTKFNNVFVKNLSESTTKEDLVKIFG 239
Query: 133 AFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKER 192
A+G+I S + G S+ +GF++F++ + A +++E++NG +N K +VG+ + ER
Sbjct: 240 AYGNITSAVIMVGMDGKSRCFGFINFKSPDDAARAVEELNGKKINDKEWYVGRAQKKSER 299
Query: 193 EKELGEKAKLFT----------NVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGK 241
E EL + + N+Y+KN + D++L E+F YG ITS ++M + +G
Sbjct: 300 EIELKRRFEQSMKDAADKYQGLNLYMKNLDDSIGDDQLCELFSNYGKITSCKIMRDANGV 359
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLK 296
S+G GFVA+ + E A +A+ NGK + GK LYV AQ+K +R L+ +F ++
Sbjct: 360 SKGSGFVAFSTREEASQALTEMNGKMISGKPLYVAFAQRKEDRKVMLQAQFSQVR 414
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 120/227 (52%), Gaps = 22/227 (9%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQD-EQGNSKGYGFVHFETEEAANKSIEK 170
++++ +L+ S+ + +Y+ FS G ++S +V +D S GY +V+F A +++E
Sbjct: 40 SLYVGDLEASVTDSQLYELFSQAGQVMSVRVCRDISSRRSLGYAYVNFNNPVDAARALEL 99
Query: 171 VNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTI 230
+N LN K + V + R + G N++IKN + + + L + F +G I
Sbjct: 100 LNFAPLNGKPIRV-MYSNRDPSSRRSGS-----ANIFIKNLDKAIDHKTLHDTFSAFGNI 153
Query: 231 TSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL- 288
S +V ++ G+S+GFGFV Y+ E A+ A+++ NG ++ K +YVG +K ER +
Sbjct: 154 LSCKVATDEMGQSKGFGFVQYDKGEAAQSAIKSLNGMLINDKPVYVGPFLRKQERENSVD 213
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSA 335
K +F N++VKNL +S E L K F +G ITSA
Sbjct: 214 KTKFN-------------NVFVKNLSESTTKEDLVKIFGAYGNITSA 247
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 61/134 (45%), Gaps = 18/134 (13%)
Query: 205 NVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQA 262
++Y+ + D +L E+F G + S RV + +S G+ +V + +P A +A++
Sbjct: 40 SLYVGDLEASVTDSQLYELFSQAGQVMSVRVCRDISSRRSLGYAYVNFNNPVDAARALEL 99
Query: 263 WNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERL 322
N ++GK + V + + R N+++KNLD +ID + L
Sbjct: 100 LNFAPLNGKPIRVMYSNRDPSS----------------RRSGSANIFIKNLDKAIDHKTL 143
Query: 323 RKEFTPFGTITSAK 336
F+ FG I S K
Sbjct: 144 HDTFSAFGNILSCK 157
>gi|70663933|emb|CAE02947.3| OSJNBa0014K14.19 [Oryza sativa Japonica Group]
Length = 657
Score = 287 bits (734), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 143/263 (54%), Positives = 194/263 (73%), Gaps = 3/263 (1%)
Query: 75 LDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAF 134
+D RAL+ +NF L G+PIR+M+S RDPS R+SG N+FIKNLDK+ID+K ++DTFSAF
Sbjct: 91 VDAARALELLNFAPLNGKPIRVMYSNRDPSSRRSGSANIFIKNLDKAIDHKTLHDTFSAF 150
Query: 135 GSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREK 194
G+ILSCKVA DE G SKG+GFV ++ EAA +I+ +NGML+N K V+VG F+ ++ERE
Sbjct: 151 GNILSCKVATDEMGQSKGFGFVQYDKGEAAQSAIKSLNGMLINDKPVYVGPFLRKQEREN 210
Query: 195 ELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESP 253
+ +K K F NV++KN E E L ++F YG ITS +M DGKSR FGF+ ++SP
Sbjct: 211 SV-DKTK-FNNVFVKNLSESTTKEDLVKIFGAYGNITSAVIMVGMDGKSRCFGFINFKSP 268
Query: 254 EFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNL 313
+ A +AV+ NGK+++ K YVGRAQKK+ER ELKRRFE + ++YQG+NLY+KNL
Sbjct: 269 DDAARAVEELNGKKINDKEWYVGRAQKKSEREIELKRRFEQSMKDAADKYQGLNLYMKNL 328
Query: 314 DDSIDDERLRKEFTPFGTITSAK 336
DDSI D++L + F+ +G ITS K
Sbjct: 329 DDSIGDDQLCELFSNYGKITSCK 351
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 72/235 (30%), Positives = 131/235 (55%), Gaps = 17/235 (7%)
Query: 77 TERALDTMNFDALKGRPIRI----MWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFS 132
+ A+ ++N + +P+ + +R+ S+ K+ NVF+KNL +S + + F
Sbjct: 180 AQSAIKSLNGMLINDKPVYVGPFLRKQERENSVDKTKFNNVFVKNLSESTTKEDLVKIFG 239
Query: 133 AFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKER 192
A+G+I S + G S+ +GF++F++ + A +++E++NG +N K +VG+ + ER
Sbjct: 240 AYGNITSAVIMVGMDGKSRCFGFINFKSPDDAARAVEELNGKKINDKEWYVGRAQKKSER 299
Query: 193 EKELGEKAKLFT----------NVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGK 241
E EL + + N+Y+KN + D++L E+F YG ITS ++M + +G
Sbjct: 300 EIELKRRFEQSMKDAADKYQGLNLYMKNLDDSIGDDQLCELFSNYGKITSCKIMRDANGV 359
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLK 296
S+G GFVA+ + F + + NGK + GK LYV AQ+K +R L+ +F ++
Sbjct: 360 SKGSGFVAFSTLPFIQ--LTEMNGKMISGKPLYVAFAQRKEDRKAMLQAQFSQVR 412
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 120/227 (52%), Gaps = 22/227 (9%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQD-EQGNSKGYGFVHFETEEAANKSIEK 170
++++ +L+ S+ + +Y+ FS G ++S +V +D S GY +V+F A +++E
Sbjct: 40 SLYVGDLEASVTDSQLYELFSQAGQVMSVRVCRDISSRRSLGYAYVNFNNPVDAARALEL 99
Query: 171 VNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTI 230
+N LN K + V + R + G N++IKN + + + L + F +G I
Sbjct: 100 LNFAPLNGKPIRV-MYSNRDPSSRRSGS-----ANIFIKNLDKAIDHKTLHDTFSAFGNI 153
Query: 231 TSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL- 288
S +V ++ G+S+GFGFV Y+ E A+ A+++ NG ++ K +YVG +K ER +
Sbjct: 154 LSCKVATDEMGQSKGFGFVQYDKGEAAQSAIKSLNGMLINDKPVYVGPFLRKQERENSVD 213
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSA 335
K +F N++VKNL +S E L K F +G ITSA
Sbjct: 214 KTKFN-------------NVFVKNLSESTTKEDLVKIFGAYGNITSA 247
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 61/134 (45%), Gaps = 18/134 (13%)
Query: 205 NVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQA 262
++Y+ + D +L E+F G + S RV + +S G+ +V + +P A +A++
Sbjct: 40 SLYVGDLEASVTDSQLYELFSQAGQVMSVRVCRDISSRRSLGYAYVNFNNPVDAARALEL 99
Query: 263 WNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERL 322
N ++GK + V + + R N+++KNLD +ID + L
Sbjct: 100 LNFAPLNGKPIRVMYSNRDPSS----------------RRSGSANIFIKNLDKAIDHKTL 143
Query: 323 RKEFTPFGTITSAK 336
F+ FG I S K
Sbjct: 144 HDTFSAFGNILSCK 157
>gi|224062834|ref|XP_002300896.1| predicted protein [Populus trichocarpa]
gi|222842622|gb|EEE80169.1| predicted protein [Populus trichocarpa]
Length = 648
Score = 287 bits (734), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 145/279 (51%), Positives = 191/279 (68%), Gaps = 8/279 (2%)
Query: 64 AILVQLGQPYM-----LDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNL 118
A L LG Y+ D +A++ +NF L G+PIRIM+S RDP+ R+SG NVFIKNL
Sbjct: 69 AGLTSLGYAYVNFSNPQDAAKAMEVLNFTPLNGKPIRIMFSHRDPTTRRSGHANVFIKNL 128
Query: 119 DKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNS 178
D IDNKA+Y+TF++FG +LSCKVA D G SKGYGF+ FE EE A +I ++NGML+N
Sbjct: 129 DTKIDNKALYETFASFGPVLSCKVAVDNNGQSKGYGFIQFENEEDAQSAINRLNGMLVND 188
Query: 179 KIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-N 237
+ V+VG F+ R ER + G FTNVY+KN E +DE LK++F YG ITS VM +
Sbjct: 189 REVYVGPFVRRLERIEANGSPK--FTNVYVKNLSETTSDEDLKKIFSSYGAITSAIVMKD 246
Query: 238 NDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKI 297
+GKSRGFGFV ++SP+ A AV+ NG K+ YVGRAQ+K ER ELK +FE +
Sbjct: 247 QNGKSRGFGFVNFQSPDSAAAAVEKLNGMTFSDKVWYVGRAQRKGEREAELKAKFEQERN 306
Query: 298 ERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
R + + NLY+KNL D+ID+ERL++ F+ FG+ITS K
Sbjct: 307 SRYEKMKAANLYLKNLGDTIDEERLKELFSEFGSITSCK 345
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 77/202 (38%), Positives = 126/202 (62%), Gaps = 15/202 (7%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV++KNL ++ ++ + FS++G+I S V +D+ G S+G+GFV+F++ ++A ++EK+
Sbjct: 213 NVYVKNLSETTSDEDLKKIFSSYGAITSAIVMKDQNGKSRGFGFVNFQSPDSAAAAVEKL 272
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKL------------FTNVYIKNFGEDFNDEK 219
NGM + K+ +VG+ + ERE EL KAK N+Y+KN G+ ++E+
Sbjct: 273 NGMTFSDKVWYVGRAQRKGEREAEL--KAKFEQERNSRYEKMKAANLYLKNLGDTIDEER 330
Query: 220 LKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRA 278
LKE+F +G+ITS +VM + G S+G GFVA+ +PE A +A+ NGK + K LYV A
Sbjct: 331 LKELFSEFGSITSCKVMLDQQGLSKGSGFVAFSTPEEASRALSEMNGKMIGKKPLYVAIA 390
Query: 279 QKKAERTQELKRRFEMLKIERL 300
Q++ ER L+ F ++ L
Sbjct: 391 QRREERMARLQAHFSQIQAPGL 412
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 60/97 (61%)
Query: 100 QRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFE 159
+R+ K N+++KNL +ID + + + FS FGSI SCKV D+QG SKG GFV F
Sbjct: 304 ERNSRYEKMKAANLYLKNLGDTIDEERLKELFSEFGSITSCKVMLDQQGLSKGSGFVAFS 363
Query: 160 TEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKEL 196
T E A++++ ++NG ++ K ++V R+ER L
Sbjct: 364 TPEEASRALSEMNGKMIGKKPLYVAIAQRREERMARL 400
>gi|323305308|gb|EGA59055.1| Pab1p [Saccharomyces cerevisiae FostersB]
gi|323333819|gb|EGA75210.1| Pab1p [Saccharomyces cerevisiae AWRI796]
Length = 466
Score = 286 bits (733), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 138/241 (57%), Positives = 180/241 (74%), Gaps = 1/241 (0%)
Query: 97 MWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFV 156
MWSQRDPSLRK G GN+FIKNL IDNKA+YDTFS FG ILS K+A DE G SKG+GFV
Sbjct: 1 MWSQRDPSLRKKGSGNIFIKNLHPDIDNKALYDTFSVFGDILSSKIATDENGKSKGFGFV 60
Query: 157 HFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFN 216
HFE E AA ++I+ +NGMLLN + ++V + RKER+ +L E +TN+Y+KN +
Sbjct: 61 HFEEEGAAKEAIDALNGMLLNGQEIYVAPHLSRKERDSQLEETKAHYTNLYVKNINSETT 120
Query: 217 DEKLKEMFEPYGTITSYRVMNN-DGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYV 275
DE+ +E+F +G I S + + DGK +GFGFV YE E A KAV+A N E++G+ LYV
Sbjct: 121 DEQFQELFAKFGPIVSASLEKDADGKLKGFGFVNYEKHEDAVKAVEALNDSELNGEKLYV 180
Query: 276 GRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSA 335
GRAQKK ER LK+++E ++E++ +YQGVNL+VKNLDDS+DDE+L +EF P+GTITSA
Sbjct: 181 GRAQKKNERMHVLKKQYEAYRLEKMAKYQGVNLFVKNLDDSVDDEKLEEEFAPYGTITSA 240
Query: 336 K 336
K
Sbjct: 241 K 241
Score = 134 bits (336), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 81/231 (35%), Positives = 132/231 (57%), Gaps = 17/231 (7%)
Query: 80 ALDTMNFDALKGRPI----RIMWSQRDPSLR--KSGVGNVFIKNLDKSIDNKAMYDTFSA 133
A+D +N L G+ I + +RD L K+ N+++KN++ ++ + F+
Sbjct: 71 AIDALNGMLLNGQEIYVAPHLSRKERDSQLEETKAHYTNLYVKNINSETTDEQFQELFAK 130
Query: 134 FGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKERE 193
FG I+S + +D G KG+GFV++E E A K++E +N LN + ++VG+ + ER
Sbjct: 131 FGPIVSASLEKDADGKLKGFGFVNYEKHEDAVKAVEALNDSELNGEKLYVGRAQKKNERM 190
Query: 194 KELGEKAKLF----------TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GKS 242
L ++ + + N+++KN + +DEKL+E F PYGTITS +VM + GKS
Sbjct: 191 HVLKKQYEAYRLEKMAKYQGVNLFVKNLDDSVDDEKLEEEFAPYGTITSAKVMRTENGKS 250
Query: 243 RGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFE 293
+GFGFV + +PE A KA+ N + V GK LYV AQ+K R +L ++ +
Sbjct: 251 KGFGFVCFSTPEEATKAITEKNQQIVAGKPLYVAIAQRKDVRRSQLAQQIQ 301
>gi|74199920|dbj|BAE20776.1| unnamed protein product [Mus musculus]
Length = 266
Score = 286 bits (733), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 144/217 (66%), Positives = 173/217 (79%), Gaps = 4/217 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD +KG+P+RIMWSQRDPSLR+SGVGNVFIKNL+K+I
Sbjct: 53 GYASVNFEQP--ADAERALDTMNFDVIKGKPVRIMWSQRDPSLRRSGVGNVFIKNLNKTI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFSAFG+ILSCKV DE G SKG+GFVHFETEEAA ++IEK+NGMLLN + VF
Sbjct: 111 DNKALYDTFSAFGNILSCKVVSDENG-SKGHGFVHFETEEAAERAIEKMNGMLLNDRKVF 169
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GK 241
VG+F +KERE ELG K FTNVYIKNFG+ +DE L +F +G I S +VM ++ GK
Sbjct: 170 VGRFKSQKEREAELGTGTKEFTNVYIKNFGDRMDDETLNGLFGRFGQILSVKVMTDEGGK 229
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRA 278
S+GFGFV++E E A+KAV NGKE++GK +YVGRA
Sbjct: 230 SKGFGFVSFERHEDAQKAVDEMNGKELNGKHIYVGRA 266
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 120/228 (52%), Gaps = 17/228 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + +Y+ FS+ G ILS +V +D S GY V+FE A +++
Sbjct: 10 MASLYVGDLHPDVTEAMLYEKFSSAGPILSIRVYRDVITRRSLGYASVNFEQPADAERAL 69
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N ++ K V I +R+ L + NV+IKN + +++ L + F +G
Sbjct: 70 DTMNFDVIKGKPVR----IMWSQRDPSL--RRSGVGNVFIKNLNKTIDNKALYDTFSAFG 123
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S +V++++ S+G GFV +E+ E AE+A++ NG ++ + ++VGR + + ER EL
Sbjct: 124 NILSCKVVSDENGSKGHGFVHFETEEAAERAIEKMNGMLLNDRKVFVGRFKSQKEREAEL 183
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ N+Y+KN D +DDE L F FG I S K
Sbjct: 184 G----------TGTKEFTNVYIKNFGDRMDDETLNGLFGRFGQILSVK 221
>gi|156846854|ref|XP_001646313.1| hypothetical protein Kpol_1032p49 [Vanderwaltozyma polyspora DSM
70294]
gi|156116988|gb|EDO18455.1| hypothetical protein Kpol_1032p49 [Vanderwaltozyma polyspora DSM
70294]
Length = 580
Score = 286 bits (731), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 144/258 (55%), Positives = 193/258 (74%), Gaps = 1/258 (0%)
Query: 80 ALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILS 139
A++ +N+ +KG+P RIMWSQRDPS+RK+G GN+FIKNL IDNKA++DTFS FG+ILS
Sbjct: 108 AIEKLNYTPIKGKPCRIMWSQRDPSMRKNGSGNIFIKNLHADIDNKALHDTFSVFGNILS 167
Query: 140 CKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEK 199
CK+A DE G SKG+GFVHFE + AA+++I+ +NGM+LN V+V + RK+RE +
Sbjct: 168 CKIATDETGKSKGFGFVHFEEDTAASEAIDAINGMMLNGLEVYVAAHVSRKDRESKFEAA 227
Query: 200 AKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRV-MNNDGKSRGFGFVAYESPEFAEK 258
FTNVY+KN + +E+ +E+F+ +G ITS + +++GK RGFGFV YE+ E A K
Sbjct: 228 KANFTNVYVKNVDLEATEEEFEELFKKFGPITSISMEKDSEGKFRGFGFVNYENHESAAK 287
Query: 259 AVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSID 318
AV N E + LYVGRAQKK ER QELK+++E K+E++ +YQGVNL+VKNLDD+ID
Sbjct: 288 AVDELNDLEFKSQKLYVGRAQKKYERLQELKKQYEEAKLEKMAKYQGVNLFVKNLDDTID 347
Query: 319 DERLRKEFTPFGTITSAK 336
DE L+KEF FGTITS K
Sbjct: 348 DELLKKEFESFGTITSVK 365
Score = 124 bits (311), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 82/231 (35%), Positives = 135/231 (58%), Gaps = 17/231 (7%)
Query: 80 ALDTMNFDALKGRPIRIMW--SQRDPSLR----KSGVGNVFIKNLDKSIDNKAMYDTFSA 133
A+D +N L G + + S++D + K+ NV++KN+D + + F
Sbjct: 195 AIDAINGMMLNGLEVYVAAHVSRKDRESKFEAAKANFTNVYVKNVDLEATEEEFEELFKK 254
Query: 134 FGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKERE 193
FG I S + +D +G +G+GFV++E E+A K+++++N + S+ ++VG+ + ER
Sbjct: 255 FGPITSISMEKDSEGKFRGFGFVNYENHESAAKAVDELNDLEFKSQKLYVGRAQKKYERL 314
Query: 194 KELG---EKAKL-------FTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GKS 242
+EL E+AKL N+++KN + +DE LK+ FE +GTITS +VM N+ GKS
Sbjct: 315 QELKKQYEEAKLEKMAKYQGVNLFVKNLDDTIDDELLKKEFESFGTITSVKVMRNETGKS 374
Query: 243 RGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFE 293
+GFGFV + SPE A +A+ N + V GK LYV AQ+K R +L ++ +
Sbjct: 375 KGFGFVCFSSPEEATRAITEKNQQIVAGKPLYVALAQRKDVRRSQLAQQIQ 425
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 104/206 (50%), Gaps = 18/206 (8%)
Query: 111 GNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSIE 169
++++ LD S+ +YD FS G + S +V +D S GY +V+F ++ +IE
Sbjct: 51 ASLYVGELDPSVSEALLYDIFSPIGPVSSIRVCRDAVTKTSLGYAYVNFNDHDSGKVAIE 110
Query: 170 KVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGT 229
K+N + K I +R+ + + N++IKN D +++ L + F +G
Sbjct: 111 KLNYTPIKGKPC----RIMWSQRDPSMRKNGS--GNIFIKNLHADIDNKALHDTFSVFGN 164
Query: 230 ITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S ++ ++ GKS+GFGFV +E A +A+ A NG ++G +YV + +R
Sbjct: 165 ILSCKIATDETGKSKGFGFVHFEEDTAASEAIDAINGMMLNGLEVYVAAHVSRKDR---- 220
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLD 314
+ +FE K N+YVKN+D
Sbjct: 221 ESKFEAAKANF------TNVYVKNVD 240
>gi|50293737|ref|XP_449280.1| hypothetical protein [Candida glabrata CBS 138]
gi|74690665|sp|Q6FKG4.1|PABP_CANGA RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|49528593|emb|CAG62254.1| unnamed protein product [Candida glabrata]
Length = 579
Score = 286 bits (731), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 137/258 (53%), Positives = 190/258 (73%), Gaps = 1/258 (0%)
Query: 80 ALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILS 139
A++ +NF +KG+ RIMWSQRDPSLRK G GN+FIKNL IDNKA+YDTFS FG+ILS
Sbjct: 92 AIEKLNFTPIKGKLCRIMWSQRDPSLRKKGAGNIFIKNLHPDIDNKALYDTFSVFGNILS 151
Query: 140 CKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEK 199
KVA DE G SKG+G+VHFE +E+A+++I+ +NGMLLN + ++VG + +KERE + E
Sbjct: 152 SKVATDETGKSKGFGYVHFEEDESASEAIDALNGMLLNGQEIYVGPHLSKKERESKFEEM 211
Query: 200 AKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRV-MNNDGKSRGFGFVAYESPEFAEK 258
FTNVYIKN + D++ +E+ +G S + +G+++GFGFV + + E A K
Sbjct: 212 KANFTNVYIKNINTETTDKEFEELVAKFGKTDSVVLERTPEGENKGFGFVNFVNHEDAVK 271
Query: 259 AVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSID 318
V+ N E G+ LYV RAQKK ER QELK+++E ++E++ +YQG+NL++KNLDDSID
Sbjct: 272 CVEELNNTEFKGQPLYVNRAQKKYERQQELKKQYEATRMEKMAKYQGINLFIKNLDDSID 331
Query: 319 DERLRKEFTPFGTITSAK 336
D++L +EF P+GTITSAK
Sbjct: 332 DKKLEEEFAPYGTITSAK 349
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 79/231 (34%), Positives = 127/231 (54%), Gaps = 17/231 (7%)
Query: 80 ALDTMNFDALKGRPI----RIMWSQRDPSLR--KSGVGNVFIKNLDKSIDNKAMYDTFSA 133
A+D +N L G+ I + +R+ K+ NV+IKN++ +K + +
Sbjct: 179 AIDALNGMLLNGQEIYVGPHLSKKERESKFEEMKANFTNVYIKNINTETTDKEFEELVAK 238
Query: 134 FGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKERE 193
FG S + + +G +KG+GFV+F E A K +E++N + ++V + + ER+
Sbjct: 239 FGKTDSVVLERTPEGENKGFGFVNFVNHEDAVKCVEELNNTEFKGQPLYVNRAQKKYERQ 298
Query: 194 KELG--------EKAKLF--TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GKS 242
+EL EK + N++IKN + +D+KL+E F PYGTITS +VM + GKS
Sbjct: 299 QELKKQYEATRMEKMAKYQGINLFIKNLDDSIDDKKLEEEFAPYGTITSAKVMTTENGKS 358
Query: 243 RGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFE 293
+GFGFV + +PE A KA+ N + V GK LYV AQ+K R +L ++ +
Sbjct: 359 KGFGFVCFSTPEEATKAITEKNQQIVAGKPLYVAIAQRKDVRRSQLAQQIQ 409
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 70/226 (30%), Positives = 119/226 (52%), Gaps = 18/226 (7%)
Query: 111 GNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSIE 169
++++ +LD S+ +YD FS G++ S +V +D S GY +V+F +AA +IE
Sbjct: 35 ASLYVGDLDPSVSEAHLYDIFSPIGAVSSIRVCRDAITKTSLGYAYVNFNDHDAAKTAIE 94
Query: 170 KVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGT 229
K+N + K+ I +R+ L +K N++IKN D +++ L + F +G
Sbjct: 95 KLNFTPIKGKLC----RIMWSQRDPSLRKKGA--GNIFIKNLHPDIDNKALYDTFSVFGN 148
Query: 230 ITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S +V ++ GKS+GFG+V +E E A +A+ A NG ++G+ +YVG K ER
Sbjct: 149 ILSSKVATDETGKSKGFGYVHFEEDESASEAIDALNGMLLNGQEIYVGPHLSKKER---- 204
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITS 334
+ +FE +K N+Y+KN++ D+ + FG S
Sbjct: 205 ESKFEEMKANF------TNVYIKNINTETTDKEFEELVAKFGKTDS 244
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 68/126 (53%), Gaps = 18/126 (14%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQ----RDPSLRKS-------------GVGNVFIKNL 118
D + ++ +N KG+P+ + +Q R L+K G+ N+FIKNL
Sbjct: 268 DAVKCVEELNNTEFKGQPLYVNRAQKKYERQQELKKQYEATRMEKMAKYQGI-NLFIKNL 326
Query: 119 DKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNS 178
D SID+K + + F+ +G+I S KV E G SKG+GFV F T E A K+I + N ++
Sbjct: 327 DDSIDDKKLEEEFAPYGTITSAKVMTTENGKSKGFGFVCFSTPEEATKAITEKNQQIVAG 386
Query: 179 KIVFVG 184
K ++V
Sbjct: 387 KPLYVA 392
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/150 (22%), Positives = 68/150 (45%), Gaps = 18/150 (12%)
Query: 189 RKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFG 246
++E E + + ++Y+ + ++ L ++F P G ++S RV + S G+
Sbjct: 20 KQEGTNEENQSETVSASLYVGDLDPSVSEAHLYDIFSPIGAVSSIRVCRDAITKTSLGYA 79
Query: 247 FVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGV 306
+V + + A+ A++ N + GK+ + +Q+ L +
Sbjct: 80 YVNFNDHDAAKTAIEKLNFTPIKGKLCRIMWSQRDPS----------------LRKKGAG 123
Query: 307 NLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
N+++KNL ID++ L F+ FG I S+K
Sbjct: 124 NIFIKNLHPDIDNKALYDTFSVFGNILSSK 153
>gi|219130188|ref|XP_002185253.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217403432|gb|EEC43385.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 605
Score = 286 bits (731), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 145/273 (53%), Positives = 196/273 (71%), Gaps = 15/273 (5%)
Query: 74 MLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSA 133
M D ERA+DTMNF +KG+P RIMWSQRDPSLR+SGVGN+F+KNL+++IDNK +YDTFS
Sbjct: 90 MADAERAMDTMNFSMIKGKPCRIMWSQRDPSLRRSGVGNIFVKNLNEAIDNKQLYDTFSL 149
Query: 134 FGSILSCKVAQDEQGN-SKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKER 192
FG+ILSCKV D +G S GYG+VH+ET EAAN +IEK++GML++ + V VG F+ R +R
Sbjct: 150 FGNILSCKVVTDREGGVSMGYGYVHYETAEAANAAIEKLDGMLIDGQEVQVGHFMRRNDR 209
Query: 193 EKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GKSRGFGFVAYE 251
+TN YIKN +++D +L + F +G + S V D ++ GFGF+ +
Sbjct: 210 -----PDIDSWTNCYIKNVPYEWDDARLNQEFAQFGEVLSATVSREDTNQTLGFGFINFA 264
Query: 252 SPEFAEKAVQAWNGKE----VDG----KILYVGRAQKKAERTQELKRRFEMLKIERLNRY 303
E A AV+A NGKE +DG + +YVGRAQKK+ER +EL+ +FE K++R++++
Sbjct: 265 EHESAVAAVEALNGKEYTTTLDGEEITQQIYVGRAQKKSERERELRAKFEAEKMDRISKF 324
Query: 304 QGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
QGVNLYVKNLDDS+ D+ LR EF GTITSA+
Sbjct: 325 QGVNLYVKNLDDSVTDDMLRDEFAVMGTITSAR 357
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 67/198 (33%), Positives = 111/198 (56%), Gaps = 20/198 (10%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
N +IKN+ D+ + F+ FG +LS V++++ + G+GF++F E+A ++E +
Sbjct: 217 NCYIKNVPYEWDDARLNQEFAQFGEVLSATVSREDTNQTLGFGFINFAEHESAVAAVEAL 276
Query: 172 NGMLLNSKI--------VFVGKFIPRKEREKEL-----GEKAKLFT-----NVYIKNFGE 213
NG + + ++VG+ + ERE+EL EK + N+Y+KN +
Sbjct: 277 NGKEYTTTLDGEEITQQIYVGRAQKKSERERELRAKFEAEKMDRISKFQGVNLYVKNLDD 336
Query: 214 DFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGK 271
D+ L++ F GTITS RVM + DG+SRGFGFV Y +PE + +AV NGK + K
Sbjct: 337 SVTDDMLRDEFAVMGTITSARVMKDAKDGRSRGFGFVCYSTPEESTRAVNEMNGKLIANK 396
Query: 272 ILYVGRAQKKAERTQELK 289
++V AQ++ R +L+
Sbjct: 397 PIFVALAQRREVRRAQLE 414
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 115/227 (50%), Gaps = 24/227 (10%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSIEK 170
++++ +L ++ +++ FSA G + S +V +D S GY +V+F A ++++
Sbjct: 40 SLYVGDLAPDVNESLLFEIFSAVGPVASIRVCRDAVTRRSLGYSYVNFHQMADAERAMDT 99
Query: 171 VNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTI 230
+N ++ K I +R+ L + N+++KN E ++++L + F +G I
Sbjct: 100 MNFSMIKGKPC----RIMWSQRDPSL--RRSGVGNIFVKNLNEAIDNKQLYDTFSLFGNI 153
Query: 231 TSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
S +V+ + G S G+G+V YE+ E A A++ +G +DG+ + VG ++ +R
Sbjct: 154 LSCKVVTDREGGVSMGYGYVHYETAEAANAAIEKLDGMLIDGQEVQVGHFMRRNDRPD-- 211
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSA 335
++ + N Y+KN+ DD RL +EF FG + SA
Sbjct: 212 -----------IDSW--TNCYIKNVPYEWDDARLNQEFAQFGEVLSA 245
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 66/135 (48%), Gaps = 20/135 (14%)
Query: 205 NVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQA 262
++Y+ + D N+ L E+F G + S RV + +S G+ +V + AE+A+
Sbjct: 40 SLYVGDLAPDVNESLLFEIFSAVGPVASIRVCRDAVTRRSLGYSYVNFHQMADAERAMDT 99
Query: 263 WNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGV-NLYVKNLDDSIDDER 321
N + GK + +Q R L+R GV N++VKNL+++ID+++
Sbjct: 100 MNFSMIKGKPCRIMWSQ----RDPSLRR-------------SGVGNIFVKNLNEAIDNKQ 142
Query: 322 LRKEFTPFGTITSAK 336
L F+ FG I S K
Sbjct: 143 LYDTFSLFGNILSCK 157
>gi|359495203|ref|XP_002263507.2| PREDICTED: LOW QUALITY PROTEIN: polyadenylate-binding protein 3
[Vitis vinifera]
Length = 1093
Score = 285 bits (730), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 141/263 (53%), Positives = 189/263 (71%), Gaps = 4/263 (1%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D AL+ +NF L G+PIRIM+S RDPS+RKSG NVFIKNLD SIDNKA+ DTF+AFG
Sbjct: 526 DATNALEHLNFTPLNGKPIRIMFSHRDPSIRKSGFANVFIKNLDPSIDNKALLDTFAAFG 585
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
++LSCK+A D G SKGYGFV FE EEAA +I+++NGML+N K V+VG F+ +ER +
Sbjct: 586 TVLSCKIALDNNGQSKGYGFVQFEQEEAAQNAIKRLNGMLINDKQVYVGLFVRHQERNR- 644
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGKSRGFGFVAYESPE 254
G + FTNVY+KN E D+ LK +F YG+ITS VM + G S+ FGFV ++S +
Sbjct: 645 -GNGSPKFTNVYVKNLSETTTDDDLKNIFGKYGSITSAVVMRDASGMSKCFGFVNFQSSD 703
Query: 255 FAEKAVQAWNGKEV-DGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNL 313
A AV+ NG D K+ YVG+AQ+K+ER EL+ +FE + + +++G NLY+KNL
Sbjct: 704 SAAAAVEHLNGATFNDDKVWYVGKAQRKSEREAELRAKFEQERKNKFEKFKGTNLYLKNL 763
Query: 314 DDSIDDERLRKEFTPFGTITSAK 336
DDS++DE+L++ F+ FGTITS K
Sbjct: 764 DDSVNDEKLKELFSEFGTITSCK 786
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 80/197 (40%), Positives = 120/197 (60%), Gaps = 12/197 (6%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV++KNL ++ + + + F +GSI S V +D G SK +GFV+F++ ++A ++E +
Sbjct: 653 NVYVKNLSETTTDDDLKNIFGKYGSITSAVVMRDASGMSKCFGFVNFQSSDSAAAAVEHL 712
Query: 172 NGMLLNS-KIVFVGKFIPRKEREKEL-----GEKAKLF-----TNVYIKNFGEDFNDEKL 220
NG N K+ +VGK + ERE EL E+ F TN+Y+KN + NDEKL
Sbjct: 713 NGATFNDDKVWYVGKAQRKSEREAELRAKFEQERKNKFEKFKGTNLYLKNLDDSVNDEKL 772
Query: 221 KEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQ 279
KE+F +GTITS +VM + G S+G GFVA+ +PE A +A+ NGK + K LYV AQ
Sbjct: 773 KELFSEFGTITSCKVMLDPQGLSKGSGFVAFLTPEEATRALNVMNGKMIGRKPLYVAVAQ 832
Query: 280 KKAERTQELKRRFEMLK 296
+K ER L+ +F ++
Sbjct: 833 RKEERKARLQAQFAQIR 849
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 124/231 (53%), Gaps = 28/231 (12%)
Query: 111 GNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSIE 169
++++ +LD +I +YD F +LS +V +D+ + S GY +V+F + + A ++E
Sbjct: 473 ASLYVGDLDTAIGEGQLYDLFQQVAPVLSIRVCRDQARRASLGYAYVNFASPQDATNALE 532
Query: 170 KVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGT 229
+N LN K + + F R ++ G F NV+IKN +++ L + F +GT
Sbjct: 533 HLNFTPLNGKPIRI-MFSHRDPSIRKSG-----FANVFIKNLDPSIDNKALLDTFAAFGT 586
Query: 230 ITSYRV-MNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
+ S ++ ++N+G+S+G+GFV +E E A+ A++ NG ++ K +YVG + ER
Sbjct: 587 VLSCKIALDNNGQSKGYGFVQFEQEEAAQNAIKRLNGMLINDKQVYVGLFVRHQER---- 642
Query: 289 KRRFEMLKIERLNRYQG----VNLYVKNLDDSIDDERLRKEFTPFGTITSA 335
NR G N+YVKNL ++ D+ L+ F +G+ITSA
Sbjct: 643 ------------NRGNGSPKFTNVYVKNLSETTTDDDLKNIFGKYGSITSA 681
>gi|297739370|emb|CBI29360.3| unnamed protein product [Vitis vinifera]
Length = 633
Score = 285 bits (730), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 141/263 (53%), Positives = 189/263 (71%), Gaps = 4/263 (1%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D AL+ +NF L G+PIRIM+S RDPS+RKSG NVFIKNLD SIDNKA+ DTF+AFG
Sbjct: 66 DATNALEHLNFTPLNGKPIRIMFSHRDPSIRKSGFANVFIKNLDPSIDNKALLDTFAAFG 125
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
++LSCK+A D G SKGYGFV FE EEAA +I+++NGML+N K V+VG F+ +ER +
Sbjct: 126 TVLSCKIALDNNGQSKGYGFVQFEQEEAAQNAIKRLNGMLINDKQVYVGLFVRHQERNR- 184
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGKSRGFGFVAYESPE 254
G + FTNVY+KN E D+ LK +F YG+ITS VM + G S+ FGFV ++S +
Sbjct: 185 -GNGSPKFTNVYVKNLSETTTDDDLKNIFGKYGSITSAVVMRDASGMSKCFGFVNFQSSD 243
Query: 255 FAEKAVQAWNGKEV-DGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNL 313
A AV+ NG D K+ YVG+AQ+K+ER EL+ +FE + + +++G NLY+KNL
Sbjct: 244 SAAAAVEHLNGATFNDDKVWYVGKAQRKSEREAELRAKFEQERKNKFEKFKGTNLYLKNL 303
Query: 314 DDSIDDERLRKEFTPFGTITSAK 336
DDS++DE+L++ F+ FGTITS K
Sbjct: 304 DDSVNDEKLKELFSEFGTITSCK 326
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 80/197 (40%), Positives = 120/197 (60%), Gaps = 12/197 (6%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV++KNL ++ + + + F +GSI S V +D G SK +GFV+F++ ++A ++E +
Sbjct: 193 NVYVKNLSETTTDDDLKNIFGKYGSITSAVVMRDASGMSKCFGFVNFQSSDSAAAAVEHL 252
Query: 172 NGMLLNS-KIVFVGKFIPRKEREKEL-----GEKAKLF-----TNVYIKNFGEDFNDEKL 220
NG N K+ +VGK + ERE EL E+ F TN+Y+KN + NDEKL
Sbjct: 253 NGATFNDDKVWYVGKAQRKSEREAELRAKFEQERKNKFEKFKGTNLYLKNLDDSVNDEKL 312
Query: 221 KEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQ 279
KE+F +GTITS +VM + G S+G GFVA+ +PE A +A+ NGK + K LYV AQ
Sbjct: 313 KELFSEFGTITSCKVMLDPQGLSKGSGFVAFLTPEEATRALNVMNGKMIGRKPLYVAVAQ 372
Query: 280 KKAERTQELKRRFEMLK 296
+K ER L+ +F ++
Sbjct: 373 RKEERKARLQAQFAQIR 389
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 124/230 (53%), Gaps = 28/230 (12%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSIEK 170
++++ +LD +I +YD F +LS +V +D+ + S GY +V+F + + A ++E
Sbjct: 14 SLYVGDLDTAIGEGQLYDLFQQVAPVLSIRVCRDQARRASLGYAYVNFASPQDATNALEH 73
Query: 171 VNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTI 230
+N LN K + + F R ++ G F NV+IKN +++ L + F +GT+
Sbjct: 74 LNFTPLNGKPIRI-MFSHRDPSIRKSG-----FANVFIKNLDPSIDNKALLDTFAAFGTV 127
Query: 231 TSYRV-MNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELK 289
S ++ ++N+G+S+G+GFV +E E A+ A++ NG ++ K +YVG + ER
Sbjct: 128 LSCKIALDNNGQSKGYGFVQFEQEEAAQNAIKRLNGMLINDKQVYVGLFVRHQER----- 182
Query: 290 RRFEMLKIERLNRYQG----VNLYVKNLDDSIDDERLRKEFTPFGTITSA 335
NR G N+YVKNL ++ D+ L+ F +G+ITSA
Sbjct: 183 -----------NRGNGSPKFTNVYVKNLSETTTDDDLKNIFGKYGSITSA 221
>gi|365760982|gb|EHN02660.1| Pab1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 466
Score = 285 bits (728), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 137/241 (56%), Positives = 182/241 (75%), Gaps = 1/241 (0%)
Query: 97 MWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFV 156
MWSQRDPSLRK G GN+FIKNL IDNKA+YDTFS FG ILS K+A DE G SKG+GFV
Sbjct: 1 MWSQRDPSLRKKGSGNIFIKNLHPDIDNKALYDTFSVFGDILSSKIATDENGKSKGFGFV 60
Query: 157 HFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFN 216
HFE E AA ++I+ +NGMLLN + ++V + RKER+ +L E +TN+Y+KN +
Sbjct: 61 HFEEEGAAKEAIDALNGMLLNGQEIYVAPHLSRKERDSQLEETKAHYTNLYVKNINSETT 120
Query: 217 DEKLKEMFEPYGTITSYRVMNN-DGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYV 275
DE+ +++F +G I S + + DGK +GFGFV YE+ E A KAV+A N +++G+ LYV
Sbjct: 121 DEQFQDLFIQFGPIVSASLEKDADGKLKGFGFVNYENHEDAVKAVEALNESDLNGEKLYV 180
Query: 276 GRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSA 335
GRAQKK ER LK+++E ++E++ +YQGVNL+VKNLDDS+DDE+L +EFTP+GTITSA
Sbjct: 181 GRAQKKNERMHVLKKQYEAYRLEKMAKYQGVNLFVKNLDDSVDDEKLEEEFTPYGTITSA 240
Query: 336 K 336
K
Sbjct: 241 K 241
Score = 134 bits (336), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 82/231 (35%), Positives = 131/231 (56%), Gaps = 17/231 (7%)
Query: 80 ALDTMNFDALKGRPI----RIMWSQRDPSLR--KSGVGNVFIKNLDKSIDNKAMYDTFSA 133
A+D +N L G+ I + +RD L K+ N+++KN++ ++ D F
Sbjct: 71 AIDALNGMLLNGQEIYVAPHLSRKERDSQLEETKAHYTNLYVKNINSETTDEQFQDLFIQ 130
Query: 134 FGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKERE 193
FG I+S + +D G KG+GFV++E E A K++E +N LN + ++VG+ + ER
Sbjct: 131 FGPIVSASLEKDADGKLKGFGFVNYENHEDAVKAVEALNESDLNGEKLYVGRAQKKNERM 190
Query: 194 KELGEKAKLF----------TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GKS 242
L ++ + + N+++KN + +DEKL+E F PYGTITS +VM + GKS
Sbjct: 191 HVLKKQYEAYRLEKMAKYQGVNLFVKNLDDSVDDEKLEEEFTPYGTITSAKVMRTENGKS 250
Query: 243 RGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFE 293
+GFGFV + +PE A KA+ N + V GK LYV AQ+K R +L ++ +
Sbjct: 251 KGFGFVCFSTPEEATKAITEKNQQIVAGKPLYVAIAQRKDVRRSQLAQQIQ 301
>gi|395856984|ref|XP_003800896.1| PREDICTED: polyadenylate-binding protein 5 [Otolemur garnettii]
Length = 382
Score = 285 bits (728), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 152/266 (57%), Positives = 205/266 (77%), Gaps = 3/266 (1%)
Query: 73 YMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFS 132
+ D E AL+TMNFD L G+P R+MWSQ D LRKSGVGN+FIKNLDKSIDN+A++ FS
Sbjct: 68 FPADAEWALNTMNFDLLNGKPFRLMWSQPDDRLRKSGVGNIFIKNLDKSIDNRALFYLFS 127
Query: 133 AFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKER 192
AFG+ILSCKV D+ G SKGY +VHF++ AAN++I +NG+ LN++ V+VG+F +ER
Sbjct: 128 AFGNILSCKVVCDDNG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEER 186
Query: 193 EKELGEKAK-LFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGKSRGFGFVAY 250
E+ + + FTNV++KN G+D +DEKLKE+F YG S +V+ + GKS+GFGFV Y
Sbjct: 187 AAEVRTRDRATFTNVFVKNLGDDMDDEKLKELFSEYGPTESVKVIRDASGKSKGFGFVRY 246
Query: 251 ESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYV 310
E+ E A+KAV +GK +DGKILYVGRAQKK ER EL+RRFE L+++ +R GV +Y+
Sbjct: 247 ETHEAAQKAVLDLHGKSIDGKILYVGRAQKKIERLAELRRRFERLRLKDKSRPPGVPIYI 306
Query: 311 KNLDDSIDDERLRKEFTPFGTITSAK 336
KNLD++IDDE+L++EF+PFG+I+ AK
Sbjct: 307 KNLDETIDDEKLKEEFSPFGSISRAK 332
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 71/180 (39%), Positives = 105/180 (58%), Gaps = 10/180 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NVF+KNL +D++ + + FS +G S KV +D G SKG+GFV +ET EAA K++ +
Sbjct: 200 NVFVKNLGDDMDDEKLKELFSEYGPTESVKVIRDASGKSKGFGFVRYETHEAAQKAVLDL 259
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKLK 221
+G ++ KI++VG+ + ER EL + + +YIKN E +DEKLK
Sbjct: 260 HGKSIDGKILYVGRAQKKIERLAELRRRFERLRLKDKSRPPGVPIYIKNLDETIDDEKLK 319
Query: 222 EMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKK 281
E F P+G+I+ +VM G+ +GFG V + S E A KAV NG+ V K L+V Q +
Sbjct: 320 EEFSPFGSISRAKVMMEVGQGKGFGVVCFSSFEEAAKAVDEMNGRTVGSKPLHVTLGQAR 379
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 114/223 (51%), Gaps = 16/223 (7%)
Query: 115 IKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSK-GYGFVHFETEEAANKSIEKVNG 173
+ +LD + +Y F G + ++ +D +S GYG+V+F A ++ +N
Sbjct: 22 VGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTHSPLGYGYVNFRFPADAEWALNTMNF 81
Query: 174 MLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSY 233
LLN K + P +R ++ G N++IKN + ++ L +F +G I S
Sbjct: 82 DLLNGKPFRLMWSQP-DDRLRKSG-----VGNIFIKNLDKSIDNRALFYLFSAFGNILSC 135
Query: 234 RVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFE 293
+V+ +D S+G+ +V ++S A +A+ NG ++ + +YVGR + ER E++ R
Sbjct: 136 KVVCDDNGSKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEERAAEVRTR-- 193
Query: 294 MLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+R N++VKNL D +DDE+L++ F+ +G S K
Sbjct: 194 -------DRATFTNVFVKNLGDDMDDEKLKELFSEYGPTESVK 229
>gi|147785105|emb|CAN75447.1| hypothetical protein VITISV_030926 [Vitis vinifera]
Length = 632
Score = 284 bits (727), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 140/263 (53%), Positives = 188/263 (71%), Gaps = 4/263 (1%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D AL+ +NF L G+PIRIM+S RDPS+RKSG NVFIKNLD SIDNKA+ DTF+AFG
Sbjct: 92 DATNALEHLNFTPLNGKPIRIMFSHRDPSIRKSGFANVFIKNLDPSIDNKALLDTFAAFG 151
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
++LSCK+A D G SKGYGFV FE EEAA +I+++NGML+N K V+VG F+ + +E+
Sbjct: 152 TVLSCKIALDNNGQSKGYGFVQFEQEEAAQNAIKRLNGMLINDKQVYVGLFV--RHQERN 209
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGKSRGFGFVAYESPE 254
G + FTNVY+KN E D+ LK +F YG+ITS VM + G S+ FGFV ++S +
Sbjct: 210 XGNGSPKFTNVYVKNLSETTTDDDLKNIFGKYGSITSAVVMRDASGMSKCFGFVNFQSSD 269
Query: 255 FAEKAVQAWNGKEV-DGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNL 313
A AV+ NG D K+ YVG+AQ+K+ER EL+ +FE + + +++G NLY+KNL
Sbjct: 270 SAAAAVEHLNGATFNDDKVWYVGKAQRKSEREAELRAKFEQERKNKFEKFKGXNLYLKNL 329
Query: 314 DDSIDDERLRKEFTPFGTITSAK 336
DDS++DE+L + F+ FGTITS K
Sbjct: 330 DDSVNDEKLXELFSEFGTITSCK 352
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 78/197 (39%), Positives = 118/197 (59%), Gaps = 12/197 (6%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV++KNL ++ + + + F +GSI S V +D G SK +GFV+F++ ++A ++E +
Sbjct: 219 NVYVKNLSETTTDDDLKNIFGKYGSITSAVVMRDASGMSKCFGFVNFQSSDSAAAAVEHL 278
Query: 172 NGMLLNS-KIVFVGKFIPRKEREKEL-----GEKAKLF-----TNVYIKNFGEDFNDEKL 220
NG N K+ +VGK + ERE EL E+ F N+Y+KN + NDEKL
Sbjct: 279 NGATFNDDKVWYVGKAQRKSEREAELRAKFEQERKNKFEKFKGXNLYLKNLDDSVNDEKL 338
Query: 221 KEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQ 279
E+F +GTITS +VM + G S+G GFVA+ +PE A +A+ NGK + K LYV AQ
Sbjct: 339 XELFSEFGTITSCKVMLDPQGLSKGSGFVAFLTPEEATRALNVMNGKMIGRKPLYVAVAQ 398
Query: 280 KKAERTQELKRRFEMLK 296
+K ER L+ +F ++
Sbjct: 399 RKEERKARLQAQFAQIR 415
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 123/228 (53%), Gaps = 22/228 (9%)
Query: 111 GNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSIE 169
++++ +LD +I +YD F +LS +V +D+ + S GY +V+F + + A ++E
Sbjct: 39 ASLYVGDLDTAIGEGQLYDLFQQVAPVLSIRVCRDQARRASLGYAYVNFASPQDATNALE 98
Query: 170 KVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGT 229
+N LN K + + F R ++ G F NV+IKN +++ L + F +GT
Sbjct: 99 HLNFTPLNGKPIRI-MFSHRDPSIRKSG-----FANVFIKNLDPSIDNKALLDTFAAFGT 152
Query: 230 ITSYRV-MNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQ-E 287
+ S ++ ++N+G+S+G+GFV +E E A+ A++ NG ++ K +YVG + ER
Sbjct: 153 VLSCKIALDNNGQSKGYGFVQFEQEEAAQNAIKRLNGMLINDKQVYVGLFVRHQERNXGN 212
Query: 288 LKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSA 335
+F N+YVKNL ++ D+ L+ F +G+ITSA
Sbjct: 213 GSPKF-------------TNVYVKNLSETTTDDDLKNIFGKYGSITSA 247
>gi|324501709|gb|ADY40758.1| Polyadenylate-binding protein 1 [Ascaris suum]
Length = 595
Score = 284 bits (726), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 137/264 (51%), Positives = 188/264 (71%), Gaps = 3/264 (1%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D ++AL+TMNFD + GRPIRIMWSQR PS + GNVF+KNL+ S+++KA+Y+ FS FG
Sbjct: 69 DAKQALETMNFDIVHGRPIRIMWSQRRPSTSRVAAGNVFVKNLNGSVNSKALYNKFSVFG 128
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+I+SCK+A DEQ SKGYGFV FETEEAA K+I+ NG++ K ++VG+F R ER ++
Sbjct: 129 NIVSCKLAVDEQSKSKGYGFVQFETEEAARKAIDGTNGVIFEGKRIYVGRFQSRSERSEQ 188
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRV-MNNDGKSRGFGFVAYESPE 254
FTNV++KNF + + EKL+++F +G I S V ++ DGK GFGFVA+E+P+
Sbjct: 189 AKRTTNCFTNVFVKNFADILDKEKLQQLFAKFGKIVSCAVSVDGDGKPNGFGFVAFENPD 248
Query: 255 FAEKAVQAWNGKEVDG--KILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKN 312
AEKAV+ + G + LYV R QKK ER EL R++++ K ER RY+G NLY+KN
Sbjct: 249 DAEKAVKDMQDYHLPGSDRKLYVSRFQKKCERLAELDRKYQLEKNERAKRYEGANLYLKN 308
Query: 313 LDDSIDDERLRKEFTPFGTITSAK 336
LDD+IDD+ LR+ F +G + SAK
Sbjct: 309 LDDAIDDDMLRRSFGEYGNVISAK 332
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 69/186 (37%), Positives = 108/186 (58%), Gaps = 13/186 (6%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NVF+KN +D + + F+ FG I+SC V+ D G G+GFV FE + A K+++ +
Sbjct: 198 NVFVKNFADILDKEKLQQLFAKFGKIVSCAVSVDGDGKPNGFGFVAFENPDDAEKAVKDM 257
Query: 172 NGMLL--NSKIVFVGKFIPRKEREKEL--------GEKAKLF--TNVYIKNFGEDFNDEK 219
L + + ++V +F + ER EL E+AK + N+Y+KN + +D+
Sbjct: 258 QDYHLPGSDRKLYVSRFQKKCERLAELDRKYQLEKNERAKRYEGANLYLKNLDDAIDDDM 317
Query: 220 LKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRA 278
L+ F YG + S +VM ++DG+S+GFGFV ++ P+ A KA+ A GK V K LYV A
Sbjct: 318 LRRSFGEYGNVISAKVMRSDDGRSKGFGFVCFDKPDEAVKAMTAMKGKMVCTKPLYVSMA 377
Query: 279 QKKAER 284
Q+K +R
Sbjct: 378 QRKEDR 383
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 72/242 (29%), Positives = 122/242 (50%), Gaps = 26/242 (10%)
Query: 96 IMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYG 154
+ S + PSL ++ +L ++ + + FS G +LS +V +D S GY
Sbjct: 9 VASSAKKPSL--------YVGDLHPDVNETVLLEKFSNIGRVLSIRVCRDALTRRSLGYA 60
Query: 155 FVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGED 214
+V+FE E A +++E +N +++ + + I +R A NV++KN
Sbjct: 61 YVNFERPEDAKQALETMNFDIVHGRPI----RIMWSQRRPSTSRVAA--GNVFVKNLNGS 114
Query: 215 FNDEKLKEMFEPYGTITSYRV-MNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKIL 273
N + L F +G I S ++ ++ KS+G+GFV +E+ E A KA+ NG +GK +
Sbjct: 115 VNSKALYNKFSVFGNIVSCKLAVDEQSKSKGYGFVQFETEEAARKAIDGTNGVIFEGKRI 174
Query: 274 YVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTIT 333
YVGR Q ++ER+++ KR N++VKN D +D E+L++ F FG I
Sbjct: 175 YVGRFQSRSERSEQAKRTTNCF----------TNVFVKNFADILDKEKLQQLFAKFGKIV 224
Query: 334 SA 335
S
Sbjct: 225 SC 226
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 72/137 (52%), Gaps = 9/137 (6%)
Query: 111 GNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEK 170
N+++KNLD +ID+ + +F +G+++S KV + + G SKG+GFV F+ + A K++
Sbjct: 302 ANLYLKNLDDAIDDDMLRRSFGEYGNVISAKVMRSDDGRSKGFGFVCFDKPDEAVKAMTA 361
Query: 171 VNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIK----NFGEDF----NDEKLKE 222
+ G ++ +K ++V RKE K + I+ +FG + ++
Sbjct: 362 MKGKMVCTKPLYVS-MAQRKEDRKAFIASQYMQRIASIRMQATSFGSGMTYMSDSTVVQP 420
Query: 223 MFEPYGTITSYRVMNND 239
+F YG T R M+ND
Sbjct: 421 LFACYGRGTLQRNMSND 437
>gi|324511850|gb|ADY44928.1| Polyadenylate-binding protein 1, partial [Ascaris suum]
Length = 544
Score = 284 bits (726), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 137/264 (51%), Positives = 188/264 (71%), Gaps = 3/264 (1%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D ++AL+TMNFD + GRPIRIMWSQR PS + GNVF+KNL+ S+++KA+Y+ FS FG
Sbjct: 69 DAKQALETMNFDIVHGRPIRIMWSQRRPSTSRVAAGNVFVKNLNGSVNSKALYNKFSVFG 128
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+I+SCK+A DEQ SKGYGFV FETEEAA K+I+ NG++ K ++VG+F R ER ++
Sbjct: 129 NIVSCKLAVDEQSKSKGYGFVQFETEEAARKAIDGTNGVIFEGKRIYVGRFQSRSERSEQ 188
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRV-MNNDGKSRGFGFVAYESPE 254
FTNV++KNF + + EKL+++F +G I S V ++ DGK GFGFVA+E+P+
Sbjct: 189 AKRTTNCFTNVFVKNFADILDKEKLQQLFAKFGKIVSCAVSVDGDGKPNGFGFVAFENPD 248
Query: 255 FAEKAVQAWNGKEVDG--KILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKN 312
AEKAV+ + G + LYV R QKK ER EL R++++ K ER RY+G NLY+KN
Sbjct: 249 DAEKAVKDMQDYHLPGSDRKLYVSRFQKKCERLAELDRKYQLEKNERAKRYEGANLYLKN 308
Query: 313 LDDSIDDERLRKEFTPFGTITSAK 336
LDD+IDD+ LR+ F +G + SAK
Sbjct: 309 LDDAIDDDMLRRSFGEYGNVISAK 332
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 69/186 (37%), Positives = 108/186 (58%), Gaps = 13/186 (6%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NVF+KN +D + + F+ FG I+SC V+ D G G+GFV FE + A K+++ +
Sbjct: 198 NVFVKNFADILDKEKLQQLFAKFGKIVSCAVSVDGDGKPNGFGFVAFENPDDAEKAVKDM 257
Query: 172 NGMLL--NSKIVFVGKFIPRKEREKEL--------GEKAKLF--TNVYIKNFGEDFNDEK 219
L + + ++V +F + ER EL E+AK + N+Y+KN + +D+
Sbjct: 258 QDYHLPGSDRKLYVSRFQKKCERLAELDRKYQLEKNERAKRYEGANLYLKNLDDAIDDDM 317
Query: 220 LKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRA 278
L+ F YG + S +VM ++DG+S+GFGFV ++ P+ A KA+ A GK V K LYV A
Sbjct: 318 LRRSFGEYGNVISAKVMRSDDGRSKGFGFVCFDKPDEAVKAMTAMKGKMVCTKPLYVSMA 377
Query: 279 QKKAER 284
Q+K +R
Sbjct: 378 QRKEDR 383
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 72/242 (29%), Positives = 122/242 (50%), Gaps = 26/242 (10%)
Query: 96 IMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYG 154
+ S + PSL ++ +L ++ + + FS G +LS +V +D S GY
Sbjct: 9 VASSAKKPSL--------YVGDLHPDVNETVLLEKFSNIGRVLSIRVCRDALTRRSLGYA 60
Query: 155 FVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGED 214
+V+FE E A +++E +N +++ + + I +R A NV++KN
Sbjct: 61 YVNFERPEDAKQALETMNFDIVHGRPI----RIMWSQRRPSTSRVAA--GNVFVKNLNGS 114
Query: 215 FNDEKLKEMFEPYGTITSYRV-MNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKIL 273
N + L F +G I S ++ ++ KS+G+GFV +E+ E A KA+ NG +GK +
Sbjct: 115 VNSKALYNKFSVFGNIVSCKLAVDEQSKSKGYGFVQFETEEAARKAIDGTNGVIFEGKRI 174
Query: 274 YVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTIT 333
YVGR Q ++ER+++ KR N++VKN D +D E+L++ F FG I
Sbjct: 175 YVGRFQSRSERSEQAKRTTNCF----------TNVFVKNFADILDKEKLQQLFAKFGKIV 224
Query: 334 SA 335
S
Sbjct: 225 SC 226
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 72/137 (52%), Gaps = 9/137 (6%)
Query: 111 GNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEK 170
N+++KNLD +ID+ + +F +G+++S KV + + G SKG+GFV F+ + A K++
Sbjct: 302 ANLYLKNLDDAIDDDMLRRSFGEYGNVISAKVMRSDDGRSKGFGFVCFDKPDEAVKAMTA 361
Query: 171 VNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIK----NFGEDF----NDEKLKE 222
+ G ++ +K ++V RKE K + I+ +FG + ++
Sbjct: 362 MKGKMVCTKPLYVS-MAQRKEDRKAFIASQYMQRIASIRMQATSFGSGMTYMSDSTVVQP 420
Query: 223 MFEPYGTITSYRVMNND 239
+F YG T R M+ND
Sbjct: 421 LFACYGRGTLQRNMSND 437
>gi|159462882|ref|XP_001689671.1| polyadenylate-binding protein RB47 [Chlamydomonas reinhardtii]
gi|158283659|gb|EDP09409.1| polyadenylate-binding protein RB47 [Chlamydomonas reinhardtii]
Length = 636
Score = 283 bits (723), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 139/261 (53%), Positives = 185/261 (70%), Gaps = 7/261 (2%)
Query: 77 TERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGS 136
+RA++T+N+ + G+P+RIMWS RDPS RKSGVGN+FIKNLDK+ID KA++DTFSAFG
Sbjct: 80 ADRAMETLNYHVVNGKPMRIMWSHRDPSARKSGVGNIFIKNLDKTIDAKALHDTFSAFGK 139
Query: 137 ILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKEL 196
ILSCKVA D G SKGYGFVHFE + AA+++I+ VN + KIV+VG F R +R ++
Sbjct: 140 ILSCKVATDANGVSKGYGFVHFEDQAAADRAIQTVNQKEIEGKIVYVGPFQKRADRPQD- 198
Query: 197 GEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEF 255
++TNV++KN D D++L +M +G ITS VM +D G S+GFGF+ ++ E
Sbjct: 199 -----VYTNVFVKNLPADIGDDELGKMATEHGEITSAVVMKDDKGGSKGFGFINFKDAES 253
Query: 256 AEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDD 315
A K V+ N +E+ GK LY GRAQKK ER L+++ E K ER +YQG+NLYVKNL D
Sbjct: 254 AAKCVEYLNEREMSGKTLYAGRAQKKTEREAMLRQKAEESKQERYLKYQGMNLYVKNLSD 313
Query: 316 SIDDERLRKEFTPFGTITSAK 336
+DD+ LR+ F GTITS K
Sbjct: 314 EVDDDALRELFANSGTITSCK 334
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/224 (35%), Positives = 128/224 (57%), Gaps = 11/224 (4%)
Query: 77 TERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGS 136
+RA+ T+N ++G+ + + Q+ + NVF+KNL I + + + G
Sbjct: 167 ADRAIQTVNQKEIEGKIVYVGPFQKRADRPQDVYTNVFVKNLPADIGDDELGKMATEHGE 226
Query: 137 ILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKEL 196
I S V +D++G SKG+GF++F+ E+A K +E +N ++ K ++ G+ + ERE L
Sbjct: 227 ITSAVVMKDDKGGSKGFGFINFKDAESAAKCVEYLNEREMSGKTLYAGRAQKKTEREAML 286
Query: 197 GEKAK----------LFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKSRGF 245
+KA+ N+Y+KN ++ +D+ L+E+F GTITS +VM + GKS+GF
Sbjct: 287 RQKAEESKQERYLKYQGMNLYVKNLSDEVDDDALRELFANSGTITSCKVMKDGSGKSKGF 346
Query: 246 GFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELK 289
GFV + S + A +AV NGK V GK LYV AQ+K R +L+
Sbjct: 347 GFVCFTSHDEATRAVTEMNGKMVKGKPLYVALAQRKDVRRAQLE 390
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 126/229 (55%), Gaps = 27/229 (11%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFET---EEAANKS 167
++++ +L+K + +++ FS+ G + S +V +D S GY +V++ + +AA+++
Sbjct: 24 SLYVGDLEKDVTEAQLFELFSSVGPVASIRVCRDAVTRRSLGYAYVNYNSALDPQAADRA 83
Query: 168 IEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPY 227
+E +N ++N K + + + R ++ G N++IKN + + + L + F +
Sbjct: 84 METLNYHVVNGKPMRI-MWSHRDPSARKSG-----VGNIFIKNLDKTIDAKALHDTFSAF 137
Query: 228 GTITSYRVMNN-DGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQ 286
G I S +V + +G S+G+GFV +E A++A+Q N KE++GKI+YVG QK+A+R Q
Sbjct: 138 GKILSCKVATDANGVSKGYGFVHFEDQAAADRAIQTVNQKEIEGKIVYVGPFQKRADRPQ 197
Query: 287 ELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSA 335
++ N++VKNL I D+ L K T G ITSA
Sbjct: 198 DVY----------------TNVFVKNLPADIGDDELGKMATEHGEITSA 230
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 68/139 (48%), Gaps = 23/139 (16%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYES---PEFAEK 258
+++Y+ + +D + +L E+F G + S RV + +S G+ +V Y S P+ A++
Sbjct: 23 SSLYVGDLEKDVTEAQLFELFSSVGPVASIRVCRDAVTRRSLGYAYVNYNSALDPQAADR 82
Query: 259 AVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGV-NLYVKNLDDSI 317
A++ N V+GK + + + + R GV N+++KNLD +I
Sbjct: 83 AMETLNYHVVNGKPMRIMWSHRDPS-----------------ARKSGVGNIFIKNLDKTI 125
Query: 318 DDERLRKEFTPFGTITSAK 336
D + L F+ FG I S K
Sbjct: 126 DAKALHDTFSAFGKILSCK 144
>gi|300796236|ref|NP_001179218.1| polyadenylate-binding protein 5 [Bos taurus]
gi|296471041|tpg|DAA13156.1| TPA: poly(A) binding protein, cytoplasmic 5 [Bos taurus]
gi|440903676|gb|ELR54310.1| Polyadenylate-binding protein 5 [Bos grunniens mutus]
Length = 382
Score = 283 bits (723), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 150/266 (56%), Positives = 206/266 (77%), Gaps = 3/266 (1%)
Query: 73 YMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFS 132
+ D E AL+TMNFD + G+P R+MWSQ D LRKSG+GN+FIKNLDKSIDN+A++ FS
Sbjct: 68 FPADAEWALNTMNFDLINGKPFRLMWSQPDDRLRKSGIGNIFIKNLDKSIDNRALFYLFS 127
Query: 133 AFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKER 192
AFGSILSCKV D+ G SKGY +VHF++ AAN++I +NG+ LN++ V+VG+F +ER
Sbjct: 128 AFGSILSCKVVCDDNG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEER 186
Query: 193 EKELGEKAK-LFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAY 250
E+ + K FTNV++KNFG+D +D+KLKE+F YG S +V+ ++ GKS+GFGFV Y
Sbjct: 187 AAEVRTRDKATFTNVFVKNFGDDMDDDKLKELFSEYGPTESVKVIRDSSGKSKGFGFVRY 246
Query: 251 ESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYV 310
E+ E A+KAV +GK +DGK+LYVGRAQKK ER EL+RRFE L+++ +R GV +Y+
Sbjct: 247 ETHEAAQKAVLDLHGKSIDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPIYI 306
Query: 311 KNLDDSIDDERLRKEFTPFGTITSAK 336
KNLD++IDDE+L++EF+ FG+I+ AK
Sbjct: 307 KNLDETIDDEKLKEEFSSFGSISRAK 332
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/185 (37%), Positives = 104/185 (56%), Gaps = 10/185 (5%)
Query: 107 KSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANK 166
K+ NVF+KN +D+ + + FS +G S KV +D G SKG+GFV +ET EAA K
Sbjct: 195 KATFTNVFVKNFGDDMDDDKLKELFSEYGPTESVKVIRDSSGKSKGFGFVRYETHEAAQK 254
Query: 167 SIEKVNGMLLNSKIVFVGKFIPRKER---------EKELGEKAKLF-TNVYIKNFGEDFN 216
++ ++G ++ K+++VG+ + ER L EK++ +YIKN E +
Sbjct: 255 AVLDLHGKSIDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPIYIKNLDETID 314
Query: 217 DEKLKEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVG 276
DEKLKE F +G+I+ +VM G+ +GFG + + S E A KAV NG+ V K L V
Sbjct: 315 DEKLKEEFSSFGSISRAKVMVEVGQGKGFGVICFSSFEEATKAVDEMNGRIVGSKPLQVT 374
Query: 277 RAQKK 281
Q +
Sbjct: 375 LGQAR 379
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 113/223 (50%), Gaps = 16/223 (7%)
Query: 115 IKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSK-GYGFVHFETEEAANKSIEKVNG 173
+ +LD + +Y F G + ++ +D S GYG+V+F A ++ +N
Sbjct: 22 VGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTMNF 81
Query: 174 MLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSY 233
L+N K + P +R ++ G N++IKN + ++ L +F +G+I S
Sbjct: 82 DLINGKPFRLMWSQP-DDRLRKSG-----IGNIFIKNLDKSIDNRALFYLFSAFGSILSC 135
Query: 234 RVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFE 293
+V+ +D S+G+ +V ++S A +A+ NG ++ + +YVGR + ER E++ R
Sbjct: 136 KVVCDDNGSKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEERAAEVRTR-- 193
Query: 294 MLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
++ N++VKN D +DD++L++ F+ +G S K
Sbjct: 194 -------DKATFTNVFVKNFGDDMDDDKLKELFSEYGPTESVK 229
>gi|380503877|ref|NP_001244114.1| polyadenylate-binding protein 5 [Equus caballus]
Length = 382
Score = 282 bits (722), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 150/266 (56%), Positives = 206/266 (77%), Gaps = 3/266 (1%)
Query: 73 YMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFS 132
+ D E AL+TMNFD + G+P R+MWSQ D LRKSGVGN+FIKNLDKSIDN+A++ FS
Sbjct: 68 FPADAEWALNTMNFDLINGKPFRLMWSQPDDRLRKSGVGNIFIKNLDKSIDNRALFYLFS 127
Query: 133 AFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKER 192
AFG+ILSCKV D+ G SKGY +VHF++ AAN++I +NG+ LN++ V+VG+F +ER
Sbjct: 128 AFGNILSCKVVCDDNG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEER 186
Query: 193 EKELGEKAK-LFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGKSRGFGFVAY 250
E+ + + FTNV++KNFG+D +DEKLKE+F YG+ S +V+ + GKS+GFGFV Y
Sbjct: 187 AAEVRTRDRATFTNVFVKNFGDDMDDEKLKEIFSEYGSTESVKVIRDASGKSKGFGFVRY 246
Query: 251 ESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYV 310
E+ E A+KAV +GK +DGK+LYVGRAQKK ER EL+RRFE L+++ +R GV +Y+
Sbjct: 247 ETHEAAQKAVLDLHGKSIDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRAPGVPIYI 306
Query: 311 KNLDDSIDDERLRKEFTPFGTITSAK 336
KNLD++IDDE+L++EF+ FG+I+ AK
Sbjct: 307 KNLDETIDDEKLKEEFSSFGSISRAK 332
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/182 (38%), Positives = 109/182 (59%), Gaps = 12/182 (6%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NVF+KN +D++ + + FS +GS S KV +D G SKG+GFV +ET EAA K++ +
Sbjct: 200 NVFVKNFGDDMDDEKLKEIFSEYGSTESVKVIRDASGKSKGFGFVRYETHEAAQKAVLDL 259
Query: 172 NGMLLNSKIVFVGKFIPRKER---------EKELGEKAKLF-TNVYIKNFGEDFNDEKLK 221
+G ++ K+++VG+ + ER L EK++ +YIKN E +DEKLK
Sbjct: 260 HGKSIDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRAPGVPIYIKNLDETIDDEKLK 319
Query: 222 EMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYV--GRAQ 279
E F +G+I+ +VM G+ +GFG V + S E A KAV NG+ + K L+V G+A+
Sbjct: 320 EEFSSFGSISRAKVMVEVGQGKGFGVVCFSSFEEATKAVDEMNGRIMGSKPLHVTLGQAR 379
Query: 280 KK 281
++
Sbjct: 380 RR 381
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 113/223 (50%), Gaps = 16/223 (7%)
Query: 115 IKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSK-GYGFVHFETEEAANKSIEKVNG 173
+ +LD + +Y F G + ++ +D S GYG+V+F A ++ +N
Sbjct: 22 VGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTMNF 81
Query: 174 MLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSY 233
L+N K + P +R ++ G N++IKN + ++ L +F +G I S
Sbjct: 82 DLINGKPFRLMWSQP-DDRLRKSG-----VGNIFIKNLDKSIDNRALFYLFSAFGNILSC 135
Query: 234 RVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFE 293
+V+ +D S+G+ +V ++S A +A+ NG ++ + +YVGR + ER E++ R
Sbjct: 136 KVVCDDNGSKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEERAAEVRTR-- 193
Query: 294 MLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+R N++VKN D +DDE+L++ F+ +G+ S K
Sbjct: 194 -------DRATFTNVFVKNFGDDMDDEKLKEIFSEYGSTESVK 229
>gi|351705901|gb|EHB08820.1| Polyadenylate-binding protein 5 [Heterocephalus glaber]
Length = 382
Score = 282 bits (721), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 151/266 (56%), Positives = 204/266 (76%), Gaps = 3/266 (1%)
Query: 73 YMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFS 132
+ D E AL+TMNFD + G+P R+MWSQ D LRKSGVGN+FIKNLDKSIDN+ ++ FS
Sbjct: 68 FPADAEWALNTMNFDLINGKPFRLMWSQPDDRLRKSGVGNIFIKNLDKSIDNRGLFYLFS 127
Query: 133 AFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKER 192
AFG+ILSCKV D+ G SKGY +VHF++ AAN++I +NG+ LN++ V+VG+F +ER
Sbjct: 128 AFGNILSCKVVCDDNG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEER 186
Query: 193 EKELGEKAK-LFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGKSRGFGFVAY 250
E+ + + FTNV++KN G+D NDEKLKE+F YG I S +V+ + GKS+GFGFV Y
Sbjct: 187 AAEVRTRDRATFTNVFVKNLGDDMNDEKLKELFSEYGQIESVKVVRDASGKSKGFGFVKY 246
Query: 251 ESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYV 310
E+ E A+KAV +GK +DGK+LYVGRAQKK ER EL+RRFE L+++ +R GV +Y+
Sbjct: 247 ETHEAAQKAVLELHGKSMDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPIYI 306
Query: 311 KNLDDSIDDERLRKEFTPFGTITSAK 336
KNLD+SIDDE+L++EF+ FG+I+ AK
Sbjct: 307 KNLDESIDDEKLKEEFSSFGSISRAK 332
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 70/178 (39%), Positives = 106/178 (59%), Gaps = 10/178 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NVF+KNL ++++ + + FS +G I S KV +D G SKG+GFV +ET EAA K++ ++
Sbjct: 200 NVFVKNLGDDMNDEKLKELFSEYGQIESVKVVRDASGKSKGFGFVKYETHEAAQKAVLEL 259
Query: 172 NGMLLNSKIVFVGKFIPRKER---------EKELGEKAKLF-TNVYIKNFGEDFNDEKLK 221
+G ++ K+++VG+ + ER L EK++ +YIKN E +DEKLK
Sbjct: 260 HGKSMDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPIYIKNLDESIDDEKLK 319
Query: 222 EMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQ 279
E F +G+I+ +VM G+ +GFG V + S E A KAV NG+ V K L+V Q
Sbjct: 320 EEFSSFGSISRAKVMMEVGQGKGFGVVCFSSFEEATKAVDEMNGRLVGSKALHVTLGQ 377
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 114/223 (51%), Gaps = 16/223 (7%)
Query: 115 IKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSK-GYGFVHFETEEAANKSIEKVNG 173
+ +LD + +Y F G + ++ +D S GYG+V+F A ++ +N
Sbjct: 22 VGDLDADVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTMNF 81
Query: 174 MLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSY 233
L+N K + P +R ++ G N++IKN + ++ L +F +G I S
Sbjct: 82 DLINGKPFRLMWSQP-DDRLRKSG-----VGNIFIKNLDKSIDNRGLFYLFSAFGNILSC 135
Query: 234 RVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFE 293
+V+ +D S+G+ +V ++S A +A+ NG ++ + +YVGR + ER E++ R
Sbjct: 136 KVVCDDNGSKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEERAAEVRTR-- 193
Query: 294 MLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+R N++VKNL D ++DE+L++ F+ +G I S K
Sbjct: 194 -------DRATFTNVFVKNLGDDMNDEKLKELFSEYGQIESVK 229
>gi|299473651|emb|CBN78045.1| poly(A) binding protein [Ectocarpus siliculosus]
Length = 688
Score = 282 bits (721), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 141/281 (50%), Positives = 195/281 (69%), Gaps = 25/281 (8%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D ERALDTMNF +K + RIMWSQRDPSLR+SGVGN+F+KNLD+++DNKA+YDTFS FG
Sbjct: 95 DAERALDTMNFTTIKDQACRIMWSQRDPSLRRSGVGNIFVKNLDETVDNKALYDTFSLFG 154
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCKVA D+ G SKGYG+VH+E +AN +I K+NGML+ K V VG F+ R R +
Sbjct: 155 NILSCKVATDDAGESKGYGYVHYEGGVSANMAIAKINGMLIAGKQVHVGHFVRRDNRAGQ 214
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM--NNDGKS----------- 242
+TN+Y+K ++D KL+E FE +G +TS +V +G+
Sbjct: 215 AD-----WTNLYVKGLPSSWDDAKLREEFEKHGAVTSCKVQVAPQEGQGDESKEKGKGGE 269
Query: 243 ---RGFGFVAYESPEFAEKAVQAWNGKEV-DGK---ILYVGRAQKKAERTQELKRRFEML 295
RGFGFV +E E A KA++A N E+ DG+ LY RAQKK+ER +EL+ + + +
Sbjct: 270 GKSRGFGFVNFEEHESAVKAIEALNNAEMPDGEGTTTLYCARAQKKSERARELQSKHDQV 329
Query: 296 KIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
K+ER+N++QGVN+YVKNLD+ + ++ +R+ F P+GTITSA+
Sbjct: 330 KMERMNKFQGVNVYVKNLDEGVTEDAMREAFAPYGTITSAR 370
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 77/246 (31%), Positives = 129/246 (52%), Gaps = 33/246 (13%)
Query: 80 ALDTMNFDALKGRPIRI-MWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSIL 138
A+ +N + G+ + + + +RD ++ N+++K L S D+ + + F G++
Sbjct: 186 AIAKINGMLIAGKQVHVGHFVRRDNRAGQADWTNLYVKGLPSSWDDAKLREEFEKHGAVT 245
Query: 139 SCKV---AQDEQGNS------------KGYGFVHFETEEAANKSIEKVNGMLL----NSK 179
SCKV Q+ QG+ +G+GFV+FE E+A K+IE +N + +
Sbjct: 246 SCKVQVAPQEGQGDESKEKGKGGEGKSRGFGFVNFEEHESAVKAIEALNNAEMPDGEGTT 305
Query: 180 IVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKLKEMFEPYGT 229
++ + + ER +EL K NVY+KN E ++ ++E F PYGT
Sbjct: 306 TLYCARAQKKSERARELQSKHDQVKMERMNKFQGVNVYVKNLDEGVTEDAMREAFAPYGT 365
Query: 230 ITSYRVM---NNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQ 286
ITS RVM +N+ +S+GFGFV + +PE A KA+ NGK + K +YV AQ++ R
Sbjct: 366 ITSARVMVDNSNNNQSKGFGFVCFSAPEEATKAITEMNGKMLLNKPIYVALAQRREVRRT 425
Query: 287 ELKRRF 292
+L+ +F
Sbjct: 426 QLEAQF 431
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 110/227 (48%), Gaps = 23/227 (10%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSIEK 170
++++ +L K + +++ FS G + S +V +D S GY +V+F A ++++
Sbjct: 43 SLYVGDLSKDVAEATLFEIFSQVGPVASIRVCRDTVTRRSLGYAYVNFHNVADAERALDT 102
Query: 171 VNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTI 230
+N + + I +R+ L + N+++KN E +++ L + F +G I
Sbjct: 103 MNFTTIKDQAC----RIMWSQRDPSL--RRSGVGNIFVKNLDETVDNKALYDTFSLFGNI 156
Query: 231 TSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELK 289
S +V +D G+S+G+G+V YE A A+ NG + GK ++VG ++ R +
Sbjct: 157 LSCKVATDDAGESKGYGYVHYEGGVSANMAIAKINGMLIAGKQVHVGHFVRRDNRAGQAD 216
Query: 290 RRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
NLYVK L S DD +LR+EF G +TS K
Sbjct: 217 W---------------TNLYVKGLPSSWDDAKLREEFEKHGAVTSCK 248
>gi|291407988|ref|XP_002720199.1| PREDICTED: poly(A) binding protein, cytoplasmic 5 [Oryctolagus
cuniculus]
Length = 382
Score = 281 bits (720), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 150/266 (56%), Positives = 204/266 (76%), Gaps = 3/266 (1%)
Query: 73 YMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFS 132
+ D E AL+TMNFD + G+P R+MWSQ D LRKSGVGN+FIKNLDKSIDN+A++ FS
Sbjct: 68 FPADAEWALNTMNFDLINGKPFRLMWSQPDDRLRKSGVGNIFIKNLDKSIDNRALFYLFS 127
Query: 133 AFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKER 192
AFG+ILSCKV D+ G SKGY +VHF++ AAN++I +NG+ LN++ V+VG+F +ER
Sbjct: 128 AFGNILSCKVVSDDHG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEER 186
Query: 193 EKELGEKAK-LFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGKSRGFGFVAY 250
E+ + + FTNV++KNFG+D +DEKLKE+F YG S +V+ + GKS+GFGFV Y
Sbjct: 187 AAEVRTRDRATFTNVFVKNFGDDMDDEKLKELFSEYGPTESVKVIRDASGKSKGFGFVRY 246
Query: 251 ESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYV 310
E+ E A+KAV +GK +DGK+LYVGRAQKK ER EL+RRFE L+++ +R GV +Y+
Sbjct: 247 ETHEAAQKAVLDLHGKSIDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPIYI 306
Query: 311 KNLDDSIDDERLRKEFTPFGTITSAK 336
KNLD+SI DE+L++EF+ FG+I+ AK
Sbjct: 307 KNLDESISDEKLKEEFSSFGSISRAK 332
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 69/180 (38%), Positives = 103/180 (57%), Gaps = 10/180 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NVF+KN +D++ + + FS +G S KV +D G SKG+GFV +ET EAA K++ +
Sbjct: 200 NVFVKNFGDDMDDEKLKELFSEYGPTESVKVIRDASGKSKGFGFVRYETHEAAQKAVLDL 259
Query: 172 NGMLLNSKIVFVGKFIPRKER---------EKELGEKAKLF-TNVYIKNFGEDFNDEKLK 221
+G ++ K+++VG+ + ER L EK++ +YIKN E +DEKLK
Sbjct: 260 HGKSIDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPIYIKNLDESISDEKLK 319
Query: 222 EMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKK 281
E F +G+I+ +VM G +GFG V + S E A KAV NG+ V K L+V Q +
Sbjct: 320 EEFSSFGSISRAKVMMEVGHGKGFGVVCFSSFEEATKAVDEMNGRIVGSKPLHVTLGQAR 379
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 113/223 (50%), Gaps = 16/223 (7%)
Query: 115 IKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSK-GYGFVHFETEEAANKSIEKVNG 173
+ +LD + +Y F G + ++ +D S GYG+V+F A ++ +N
Sbjct: 22 VGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTMNF 81
Query: 174 MLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSY 233
L+N K + P +R ++ G N++IKN + ++ L +F +G I S
Sbjct: 82 DLINGKPFRLMWSQP-DDRLRKSG-----VGNIFIKNLDKSIDNRALFYLFSAFGNILSC 135
Query: 234 RVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFE 293
+V+++D S+G+ +V ++S A +A+ NG ++ + +YVGR + ER E++ R
Sbjct: 136 KVVSDDHGSKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEERAAEVRTR-- 193
Query: 294 MLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+R N++VKN D +DDE+L++ F+ +G S K
Sbjct: 194 -------DRATFTNVFVKNFGDDMDDEKLKELFSEYGPTESVK 229
>gi|426257905|ref|XP_004022562.1| PREDICTED: polyadenylate-binding protein 5-like [Ovis aries]
Length = 382
Score = 281 bits (719), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 149/266 (56%), Positives = 204/266 (76%), Gaps = 3/266 (1%)
Query: 73 YMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFS 132
+ D E AL+TMNFD + G+P R+MWSQ D LRKSG+GN+FIKNLDKSIDN+A++ FS
Sbjct: 68 FPADAEWALNTMNFDLINGKPFRLMWSQPDDRLRKSGIGNIFIKNLDKSIDNRALFYLFS 127
Query: 133 AFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKER 192
AFGSILSCKV D+ G SKGY +VHF++ AAN++I +NG+ LN++ V+VG+F +ER
Sbjct: 128 AFGSILSCKVVCDDNG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEER 186
Query: 193 EKELGEKAK-LFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGKSRGFGFVAY 250
E+ + + FTNV++KNFG+D +D+KLKE+F YG S +V+ + GKS+GFGFV Y
Sbjct: 187 AAEVRTRDRATFTNVFVKNFGDDMDDDKLKELFSEYGPTESVKVIRDASGKSKGFGFVRY 246
Query: 251 ESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYV 310
E+ E A+KAV +GK +DGK+LYVGRAQKK ER EL+RRFE L+++ R GV +Y+
Sbjct: 247 ETHEAAQKAVLDLHGKSIDGKVLYVGRAQKKIERLAELRRRFERLRLKEKTRPPGVPIYI 306
Query: 311 KNLDDSIDDERLRKEFTPFGTITSAK 336
KNLD++IDDE+L++EF+ FG+I+ AK
Sbjct: 307 KNLDETIDDEKLKEEFSSFGSISRAK 332
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/180 (37%), Positives = 100/180 (55%), Gaps = 10/180 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NVF+KN +D+ + + FS +G S KV +D G SKG+GFV +ET EAA K++ +
Sbjct: 200 NVFVKNFGDDMDDDKLKELFSEYGPTESVKVIRDASGKSKGFGFVRYETHEAAQKAVLDL 259
Query: 172 NGMLLNSKIVFVGKFIPRKER---------EKELGEKAKLF-TNVYIKNFGEDFNDEKLK 221
+G ++ K+++VG+ + ER L EK + +YIKN E +DEKLK
Sbjct: 260 HGKSIDGKVLYVGRAQKKIERLAELRRRFERLRLKEKTRPPGVPIYIKNLDETIDDEKLK 319
Query: 222 EMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKK 281
E F +G+I+ +VM + +GFG V + S E A KAV NG+ V K L V Q +
Sbjct: 320 EEFSSFGSISRAKVMVEVEQGKGFGVVCFSSFEEATKAVDEMNGRIVGSKPLQVTLGQAR 379
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 113/223 (50%), Gaps = 16/223 (7%)
Query: 115 IKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSK-GYGFVHFETEEAANKSIEKVNG 173
+ +LD + +Y F G + ++ +D S GYG+V+F A ++ +N
Sbjct: 22 VGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTMNF 81
Query: 174 MLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSY 233
L+N K + P +R ++ G N++IKN + ++ L +F +G+I S
Sbjct: 82 DLINGKPFRLMWSQP-DDRLRKSG-----IGNIFIKNLDKSIDNRALFYLFSAFGSILSC 135
Query: 234 RVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFE 293
+V+ +D S+G+ +V ++S A +A+ NG ++ + +YVGR + ER E++ R
Sbjct: 136 KVVCDDNGSKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEERAAEVRTR-- 193
Query: 294 MLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+R N++VKN D +DD++L++ F+ +G S K
Sbjct: 194 -------DRATFTNVFVKNFGDDMDDDKLKELFSEYGPTESVK 229
>gi|444732647|gb|ELW72929.1| Polyadenylate-binding protein 5 [Tupaia chinensis]
Length = 382
Score = 280 bits (717), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 150/266 (56%), Positives = 205/266 (77%), Gaps = 3/266 (1%)
Query: 73 YMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFS 132
+ D E AL+TMNFD + G+P R+MWSQ D LRKSGVGN+FIKNLDKSIDN+A++ FS
Sbjct: 68 FPADAEWALNTMNFDLINGKPFRLMWSQPDDRLRKSGVGNIFIKNLDKSIDNRALFYLFS 127
Query: 133 AFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKER 192
AFG+ILSCKV D+ G SKGY +VHF++ AAN++I +NG+ LN++ V+VG+F +ER
Sbjct: 128 AFGNILSCKVVCDDNG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEER 186
Query: 193 EKELGEKAK-LFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGKSRGFGFVAY 250
E+ + + FTNV++KNFG+D +DEKLKE+F YG S +V+ + GKS+GFGFV Y
Sbjct: 187 AAEVRTRDRATFTNVFVKNFGDDMDDEKLKELFSEYGPTESVKVIRDAGGKSKGFGFVRY 246
Query: 251 ESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYV 310
E+ E A+KAV +GK +DGK+LYVGRAQKK ER EL+RRFE L+++ +R GV +Y+
Sbjct: 247 ETHEAAQKAVLDLHGKSMDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPIYI 306
Query: 311 KNLDDSIDDERLRKEFTPFGTITSAK 336
KNLD++IDDE+L++EF+ FG+I+ AK
Sbjct: 307 KNLDETIDDEKLKEEFSSFGSISRAK 332
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 69/180 (38%), Positives = 104/180 (57%), Gaps = 10/180 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NVF+KN +D++ + + FS +G S KV +D G SKG+GFV +ET EAA K++ +
Sbjct: 200 NVFVKNFGDDMDDEKLKELFSEYGPTESVKVIRDAGGKSKGFGFVRYETHEAAQKAVLDL 259
Query: 172 NGMLLNSKIVFVGKFIPRKER---------EKELGEKAKLF-TNVYIKNFGEDFNDEKLK 221
+G ++ K+++VG+ + ER L EK++ +YIKN E +DEKLK
Sbjct: 260 HGKSMDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPIYIKNLDETIDDEKLK 319
Query: 222 EMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKK 281
E F +G+I+ +VM G+ +GFG V + S E A KAV NG+ V K L+V Q +
Sbjct: 320 EEFSSFGSISRAKVMMEVGQGKGFGVVCFSSFEEATKAVDEMNGRVVGSKPLHVTLGQAR 379
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 112/223 (50%), Gaps = 16/223 (7%)
Query: 115 IKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSK-GYGFVHFETEEAANKSIEKVNG 173
+ +LD + +Y F G + ++ +D S GYG+V+F A ++ +N
Sbjct: 22 VGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTMNF 81
Query: 174 MLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSY 233
L+N K + P +R ++ G N++IKN + ++ L +F +G I S
Sbjct: 82 DLINGKPFRLMWSQP-DDRLRKSG-----VGNIFIKNLDKSIDNRALFYLFSAFGNILSC 135
Query: 234 RVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFE 293
+V+ +D S+G+ +V ++S A +A+ NG ++ + +YVGR + ER E++ R
Sbjct: 136 KVVCDDNGSKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEERAAEVRTR-- 193
Query: 294 MLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+R N++VKN D +DDE+L++ F+ +G S K
Sbjct: 194 -------DRATFTNVFVKNFGDDMDDEKLKELFSEYGPTESVK 229
>gi|410988961|ref|XP_004000741.1| PREDICTED: polyadenylate-binding protein 5 [Felis catus]
Length = 382
Score = 280 bits (716), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 150/266 (56%), Positives = 205/266 (77%), Gaps = 3/266 (1%)
Query: 73 YMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFS 132
+ D E AL+TMNFD + G+P R+MWSQ D LRKSGVGN+FIKNLDKSIDN+A++ FS
Sbjct: 68 FPADAEWALNTMNFDLINGKPFRLMWSQPDDRLRKSGVGNIFIKNLDKSIDNRALFYLFS 127
Query: 133 AFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKER 192
AFG+ILSCKV D+ G SKGY +VHF++ AAN++I +NG+ LN++ V+VG+F +ER
Sbjct: 128 AFGNILSCKVVCDDNG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEER 186
Query: 193 EKELGEKAK-LFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGKSRGFGFVAY 250
E+ K + FTNV++KNFG+D +DEKLKE+F YG S +V+ + GKS+GFGFV Y
Sbjct: 187 AAEVRTKDRATFTNVFVKNFGDDMDDEKLKEIFSGYGPTESVKVIRDASGKSKGFGFVRY 246
Query: 251 ESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYV 310
E+ E A+KAV +GK ++GK+LYVGRAQKK ER EL+RRFE L+++ +R GV +Y+
Sbjct: 247 ETHEAAQKAVLDLHGKSINGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPIYI 306
Query: 311 KNLDDSIDDERLRKEFTPFGTITSAK 336
KNLD++IDDE+L++EF+ FG+I+ AK
Sbjct: 307 KNLDETIDDEKLKEEFSSFGSISRAK 332
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 70/180 (38%), Positives = 104/180 (57%), Gaps = 10/180 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NVF+KN +D++ + + FS +G S KV +D G SKG+GFV +ET EAA K++ +
Sbjct: 200 NVFVKNFGDDMDDEKLKEIFSGYGPTESVKVIRDASGKSKGFGFVRYETHEAAQKAVLDL 259
Query: 172 NGMLLNSKIVFVGKFIPRKER---------EKELGEKAKLF-TNVYIKNFGEDFNDEKLK 221
+G +N K+++VG+ + ER L EK++ +YIKN E +DEKLK
Sbjct: 260 HGKSINGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPIYIKNLDETIDDEKLK 319
Query: 222 EMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKK 281
E F +G+I+ +VM G+ +GFG V + S E A KAV NG+ V K L+V Q +
Sbjct: 320 EEFSSFGSISRAKVMVEVGQGKGFGVVCFSSFEDATKAVDEMNGRTVGSKPLHVTLGQAR 379
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 112/223 (50%), Gaps = 16/223 (7%)
Query: 115 IKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSK-GYGFVHFETEEAANKSIEKVNG 173
+ +LD + +Y F G + ++ +D S GYG+V+F A ++ +N
Sbjct: 22 VGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTMNF 81
Query: 174 MLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSY 233
L+N K + P +R ++ G N++IKN + ++ L +F +G I S
Sbjct: 82 DLINGKPFRLMWSQP-DDRLRKSG-----VGNIFIKNLDKSIDNRALFYLFSAFGNILSC 135
Query: 234 RVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFE 293
+V+ +D S+G+ +V ++S A +A+ NG ++ + +YVGR + ER E++ +
Sbjct: 136 KVVCDDNGSKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEERAAEVRTK-- 193
Query: 294 MLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+R N++VKN D +DDE+L++ F+ +G S K
Sbjct: 194 -------DRATFTNVFVKNFGDDMDDEKLKEIFSGYGPTESVK 229
>gi|335775987|gb|AEH58755.1| polyadenylate-binding protein 1-like protein [Equus caballus]
Length = 510
Score = 280 bits (716), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 136/199 (68%), Positives = 165/199 (82%), Gaps = 2/199 (1%)
Query: 139 SCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGE 198
+CKV +DE G SKGYGFVHFET+EAA ++IEK+NGMLLN + VFVG+F RKERE ELG
Sbjct: 1 ACKVVRDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGA 59
Query: 199 KAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAE 257
+AK FTNVYIKNFGED +DE+LK++F +G S +VM ++ GKS+GFGFV++E E A+
Sbjct: 60 RAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQ 119
Query: 258 KAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSI 317
KAV NGKE++GK +YVGRAQKK ER ELKR+FE +K +R+ RYQGVNLYVKNLDD I
Sbjct: 120 KAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGI 179
Query: 318 DDERLRKEFTPFGTITSAK 336
DDERLRKEF+PFGTITSAK
Sbjct: 180 DDERLRKEFSPFGTITSAK 198
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 93/232 (40%), Positives = 133/232 (57%), Gaps = 16/232 (6%)
Query: 77 TERALDTMNFDALKGRPIRI----MWSQRDPSL--RKSGVGNVFIKNLDKSIDNKAMYDT 130
ERA++ MN L R + + +R+ L R NV+IKN + +D++ + D
Sbjct: 25 AERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDL 84
Query: 131 FSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRK 190
F FG LS KV DE G SKG+GFV FE E A K+++++NG LN K ++VG+ +
Sbjct: 85 FGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKV 144
Query: 191 EREKELGEKAKLF----------TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDG 240
ER+ EL K + N+Y+KN + +DE+L++ F P+GTITS +VM G
Sbjct: 145 ERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMMEGG 204
Query: 241 KSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRF 292
+S+GFGFV + SPE A KAV NG+ V K LYV AQ+K ER L ++
Sbjct: 205 RSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAHLTNQY 256
>gi|255572313|ref|XP_002527095.1| polyadenylate-binding protein, putative [Ricinus communis]
gi|223533518|gb|EEF35258.1| polyadenylate-binding protein, putative [Ricinus communis]
Length = 657
Score = 280 bits (715), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 140/263 (53%), Positives = 186/263 (70%), Gaps = 4/263 (1%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D A+ +NF L G+PIRIM+S RDPS+RKSG GNVFIKNLD ++DNK +++TF+AFG
Sbjct: 98 DAANAMKALNFTPLNGKPIRIMFSHRDPSIRKSGYGNVFIKNLDSTLDNKLLHETFAAFG 157
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
++LSCKVA D G SKGYGFV FE EE+A ++I ++GM LN K V+VG F+ ++ER +
Sbjct: 158 TVLSCKVAVDSNGQSKGYGFVQFENEESAERAISFLDGMCLNDKQVYVGFFVRQQERTRT 217
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPE 254
G FTNVY+KN E +E L+++F YGTITS VM + GKSRGFGFV ++ P+
Sbjct: 218 NGSPK--FTNVYVKNLSETITNEDLEKVFGVYGTITSALVMKDQTGKSRGFGFVNFQDPD 275
Query: 255 FAEKAVQAWNGKEV-DGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNL 313
A AV+ NG D K YVGRAQ+K+ER ELK +FE + R R + NLY+KNL
Sbjct: 276 SAAAAVEKLNGTTAHDDKAWYVGRAQRKSEREAELKAKFEQERNSRYERLKAANLYLKNL 335
Query: 314 DDSIDDERLRKEFTPFGTITSAK 336
DD+I+D +L++ F+ FG+ITS K
Sbjct: 336 DDNINDVKLKELFSEFGSITSCK 358
Score = 140 bits (353), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 78/199 (39%), Positives = 123/199 (61%), Gaps = 16/199 (8%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV++KNL ++I N+ + F +G+I S V +D+ G S+G+GFV+F+ ++A ++EK+
Sbjct: 225 NVYVKNLSETITNEDLEKVFGVYGTITSALVMKDQTGKSRGFGFVNFQDPDSAAAAVEKL 284
Query: 172 NGMLLNS-KIVFVGKFIPRKEREKELGEKAKL------------FTNVYIKNFGEDFNDE 218
NG + K +VG+ + ERE EL KAK N+Y+KN ++ ND
Sbjct: 285 NGTTAHDDKAWYVGRAQRKSEREAEL--KAKFEQERNSRYERLKAANLYLKNLDDNINDV 342
Query: 219 KLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGR 277
KLKE+F +G+ITS +VM ++ G S+G GFVA+ +PE A +A++ NGK + K LYV
Sbjct: 343 KLKELFSEFGSITSCKVMLDHQGVSKGSGFVAFSTPEEASRALKEMNGKMIGRKPLYVAI 402
Query: 278 AQKKAERTQELKRRFEMLK 296
AQ+K ER L+ F +++
Sbjct: 403 AQRKEERKARLQAHFALVR 421
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 72/227 (31%), Positives = 133/227 (58%), Gaps = 22/227 (9%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSIEK 170
++++ +L+++++ + +YD FS ++S +V +D+ + +S GYG+V+F + A +++
Sbjct: 46 SLYVGDLEQNVNEEQLYDLFSQIAQVVSVRVCRDQTKRSSLGYGYVNFSNPQDAANAMKA 105
Query: 171 VNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTI 230
+N LN K + + F R ++ G + NV+IKN +++ L E F +GT+
Sbjct: 106 LNFTPLNGKPIRI-MFSHRDPSIRKSG-----YGNVFIKNLDSTLDNKLLHETFAAFGTV 159
Query: 231 TSYRV-MNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELK 289
S +V ++++G+S+G+GFV +E+ E AE+A+ +G ++ K +YVG ++ ERT
Sbjct: 160 LSCKVAVDSNGQSKGYGFVQFENEESAERAISFLDGMCLNDKQVYVGFFVRQQERT---- 215
Query: 290 RRFEMLKIERLN-RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSA 335
R N + N+YVKNL ++I +E L K F +GTITSA
Sbjct: 216 ---------RTNGSPKFTNVYVKNLSETITNEDLEKVFGVYGTITSA 253
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 58/87 (66%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIE 169
N+++KNLD +I++ + + FS FGSI SCKV D QG SKG GFV F T E A+++++
Sbjct: 327 AANLYLKNLDDNINDVKLKELFSEFGSITSCKVMLDHQGVSKGSGFVAFSTPEEASRALK 386
Query: 170 KVNGMLLNSKIVFVGKFIPRKEREKEL 196
++NG ++ K ++V ++ER+ L
Sbjct: 387 EMNGKMIGRKPLYVAIAQRKEERKARL 413
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 69/134 (51%), Gaps = 18/134 (13%)
Query: 205 NVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDGK--SRGFGFVAYESPEFAEKAVQA 262
++Y+ + ++ N+E+L ++F + S RV + K S G+G+V + +P+ A A++A
Sbjct: 46 SLYVGDLEQNVNEEQLYDLFSQIAQVVSVRVCRDQTKRSSLGYGYVNFSNPQDAANAMKA 105
Query: 263 WNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERL 322
N ++GK + + + + + + N+++KNLD ++D++ L
Sbjct: 106 LNFTPLNGKPIRIMFSHRDPS----------------IRKSGYGNVFIKNLDSTLDNKLL 149
Query: 323 RKEFTPFGTITSAK 336
+ F FGT+ S K
Sbjct: 150 HETFAAFGTVLSCK 163
>gi|328715672|ref|XP_001946271.2| PREDICTED: polyadenylate-binding protein 1-like [Acyrthosiphon
pisum]
Length = 964
Score = 279 bits (714), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 144/229 (62%), Positives = 178/229 (77%), Gaps = 2/229 (0%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIE 169
+G V K +++ + K ++ L VAQDE GNSKGYGFVHFET+++A +SIE
Sbjct: 403 IGGVQTKCKEQNSNIKYIHCYAHCLNLALVDSVAQDETGNSKGYGFVHFETKQSATQSIE 462
Query: 170 KVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGT 229
KVNGMLLN K VFVG+F+ R +REKELG++AKL+TNVYIKN E+ N+++L EMF+ YGT
Sbjct: 463 KVNGMLLNGKKVFVGRFVGRNDREKELGQQAKLYTNVYIKNIDENVNEKELFEMFKKYGT 522
Query: 230 ITSYRVM-NNDGKSRGFGFVAYESPEFAEKAVQAWNGKE-VDGKILYVGRAQKKAERTQE 287
ITS +VM +DG SRGFGFVA+E P+ AEKAV +GK+ +GK YV RAQKK ER QE
Sbjct: 523 ITSCKVMFKDDGSSRGFGFVAFEDPKEAEKAVTELHGKKSPEGKTYYVNRAQKKTERQQE 582
Query: 288 LKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
LKR+FE KIER+NRYQGVNLYVKNLDD+IDDERLR+EF+ FGTI SAK
Sbjct: 583 LKRKFEQYKIERINRYQGVNLYVKNLDDTIDDERLRREFSAFGTIKSAK 631
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 73/192 (38%), Positives = 118/192 (61%), Gaps = 11/192 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV+IKN+D++++ K +++ F +G+I SCKV + G+S+G+GFV FE + A K++ ++
Sbjct: 498 NVYIKNIDENVNEKELFEMFKKYGTITSCKVMFKDDGSSRGFGFVAFEDPKEAEKAVTEL 557
Query: 172 NGM-LLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKL 220
+G K +V + + ER++EL K + + N+Y+KN + +DE+L
Sbjct: 558 HGKKSPEGKTYYVNRAQKKTERQQELKRKFEQYKIERINRYQGVNLYVKNLDDTIDDERL 617
Query: 221 KEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
+ F +GTI S +VM +DG+S+GFGFV + SPE A KAV NG+ V K LYV AQ+
Sbjct: 618 RREFSAFGTIKSAKVMMDDGRSKGFGFVYFSSPEEATKAVTDMNGRIVGTKPLYVTLAQR 677
Query: 281 KAERTQELKRRF 292
K +R L ++
Sbjct: 678 KKDRKAHLDSQY 689
>gi|443926079|gb|ELU44821.1| polyadenylate-binding protein [Rhizoctonia solani AG-1 IA]
Length = 593
Score = 279 bits (713), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 141/238 (59%), Positives = 181/238 (76%), Gaps = 1/238 (0%)
Query: 100 QRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFE 159
+RDP+LRK+G GN+FIKNLD++IDNKA++DTF+AFG++LSCKVA DE G S+GYG+VH+E
Sbjct: 230 RRDPALRKTGQGNIFIKNLDEAIDNKALHDTFAAFGNVLSCKVATDETGKSRGYGYVHYE 289
Query: 160 TEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEK 219
T E+A +I+ VN MLLN K VFVG I RKER+ ++ E FTN+Y+KN D + +
Sbjct: 290 TAESAEAAIKAVNRMLLNDKQVFVGHHISRKERQSQIDEARAQFTNIYVKNLDTDITEAE 349
Query: 220 LKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRA 278
+ MFE +G ITS + +N+GKSRGFGFV YE+ E AE+AV + KE+ GK+L+VGRA
Sbjct: 350 FRVMFEEFGNITSAVLQTDNEGKSRGFGFVNYENHEEAERAVNEMHEKEIKGKVLFVGRA 409
Query: 279 QKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
QKK+ER EL R E K ER N+Y GVNLYVKNLDD +DD++LR EF FGTITS K
Sbjct: 410 QKKSERQSELARSHEAAKQERQNKYAGVNLYVKNLDDDVDDDKLRAEFEAFGTITSCK 467
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 72/189 (38%), Positives = 112/189 (59%), Gaps = 11/189 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
N+++KNLD I F FG+I S + D +G S+G+GFV++E E A +++ ++
Sbjct: 335 NIYVKNLDTDITEAEFRVMFEEFGNITSAVLQTDNEGKSRGFGFVNYENHEEAERAVNEM 394
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELG---EKAK-------LFTNVYIKNFGEDFNDEKLK 221
+ + K++FVG+ + ER+ EL E AK N+Y+KN +D +D+KL+
Sbjct: 395 HEKEIKGKVLFVGRAQKKSERQSELARSHEAAKQERQNKYAGVNLYVKNLDDDVDDDKLR 454
Query: 222 EMFEPYGTITSYRVMNNDGK-SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
FE +GTITS +VM N+ S+GFGFV + +P+ A KAV N K + K LYV AQ+
Sbjct: 455 AEFEAFGTITSCKVMRNERDISKGFGFVCFSTPDEATKAVTEMNNKMIGTKPLYVSLAQR 514
Query: 281 KAERTQELK 289
+ R Q+L+
Sbjct: 515 RDVRRQQLE 523
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 77/138 (55%), Gaps = 18/138 (13%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQ----RDPSLRKS-------------GVGNVFIKNL 118
+ ERA++ M+ +KG+ + + +Q R L +S GV N+++KNL
Sbjct: 386 EAERAVNEMHEKEIKGKVLFVGRAQKKSERQSELARSHEAAKQERQNKYAGV-NLYVKNL 444
Query: 119 DKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNS 178
D +D+ + F AFG+I SCKV ++E+ SKG+GFV F T + A K++ ++N ++ +
Sbjct: 445 DDDVDDDKLRAEFEAFGTITSCKVMRNERDISKGFGFVCFSTPDEATKAVTEMNNKMIGT 504
Query: 179 KIVFVGKFIPRKEREKEL 196
K ++V R R ++L
Sbjct: 505 KPLYVSLAQRRDVRRQQL 522
>gi|29841435|gb|AAP06467.1| similar to GenBank Accession Number AJ298278 poly(A) binding
protein in Rattus norvegicus [Schistosoma japonicum]
Length = 307
Score = 279 bits (713), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 136/236 (57%), Positives = 177/236 (75%), Gaps = 8/236 (3%)
Query: 77 TERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGS 136
E+AL+ +N++ L GRPIRIMWSQRDPSLRKSG GN+FIKNLDKSI+ K +YDTFS FG
Sbjct: 67 AEQALEVLNYEPLMGRPIRIMWSQRDPSLRKSGKGNIFIKNLDKSIEQKELYDTFSFFGR 126
Query: 137 ILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKEL 196
ILSCK+ DE G SKGYGFVHFE EE A ++IEK+N M++ ++V+VGKFIP+ ER K
Sbjct: 127 ILSCKIVMDENGQSKGYGFVHFEKEECAERAIEKINNMIIRDRVVYVGKFIPKTER-KSQ 185
Query: 197 GEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPEF 255
K K F N+Y+KNF + ++EKLKEMF +G I S VM +N+GKS+GFGFV Y P+
Sbjct: 186 ARKVK-FNNLYVKNFPPETDNEKLKEMFSEFGEIKSACVMKDNEGKSKGFGFVCYLDPDH 244
Query: 256 AEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVK 311
AE AV+ +GKE++G++LY RAQ+K ER +ELK++ E + ER +R LYV+
Sbjct: 245 AENAVRTMHGKEIEGRVLYCARAQRKEERQEELKQKIEKQRAERQSR-----LYVQ 295
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/227 (31%), Positives = 123/227 (54%), Gaps = 22/227 (9%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQD-EQGNSKGYGFVHFETEEAANKSIEK 170
++++ +L + + A+ FS G +LS +V +D S GYG+V+FE + A +++E
Sbjct: 14 SLYVGDLHPRVSDSALQAKFSEIGPVLSARVCRDLATRQSLGYGYVNFEDPKHAEQALEV 73
Query: 171 VNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTI 230
+N L + + I +R+ L + K N++IKN + ++L + F +G I
Sbjct: 74 LNYEPLMGRPIR----IMWSQRDPSLRKSGK--GNIFIKNLDKSIEQKELYDTFSFFGRI 127
Query: 231 TSYR-VMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAER-TQEL 288
S + VM+ +G+S+G+GFV +E E AE+A++ N + +++YVG+ K ER +Q
Sbjct: 128 LSCKIVMDENGQSKGYGFVHFEKEECAERAIEKINNMIIRDRVVYVGKFIPKTERKSQAR 187
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSA 335
K +F NLYVKN D+E+L++ F+ FG I SA
Sbjct: 188 KVKFN-------------NLYVKNFPPETDNEKLKEMFSEFGEIKSA 221
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 66/135 (48%), Gaps = 18/135 (13%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDG--KSRGFGFVAYESPEFAEKAVQ 261
+++Y+ + +D L+ F G + S RV + +S G+G+V +E P+ AE+A++
Sbjct: 13 SSLYVGDLHPRVSDSALQAKFSEIGPVLSARVCRDLATRQSLGYGYVNFEDPKHAEQALE 72
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDER 321
N + + G+ + + +Q+ L + N+++KNLD SI+ +
Sbjct: 73 VLNYEPLMGRPIRIMWSQRDPS----------------LRKSGKGNIFIKNLDKSIEQKE 116
Query: 322 LRKEFTPFGTITSAK 336
L F+ FG I S K
Sbjct: 117 LYDTFSFFGRILSCK 131
>gi|74008013|ref|XP_549122.2| PREDICTED: polyadenylate-binding protein 5 [Canis lupus familiaris]
Length = 382
Score = 278 bits (712), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 149/266 (56%), Positives = 204/266 (76%), Gaps = 3/266 (1%)
Query: 73 YMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFS 132
+ D E AL+TMNFD + G+P R+MWSQ D LRKSGVGN+FIKNLDKSIDN+A++ FS
Sbjct: 68 FPADAEWALNTMNFDLINGKPFRLMWSQPDDRLRKSGVGNIFIKNLDKSIDNRALFYLFS 127
Query: 133 AFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKER 192
AFG+ILSCKV D+ G SKGY +VHF++ AAN++I +NG+ LN++ V+VG+F +ER
Sbjct: 128 AFGNILSCKVVCDDNG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEER 186
Query: 193 EKELGEKAK-LFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGKSRGFGFVAY 250
E+ + + FTNV++KNFG D +DEKLKE+F YG S +V+ + GKS+GFGFV Y
Sbjct: 187 AAEVRTRDRATFTNVFVKNFGNDMDDEKLKEIFSGYGPTESVKVIRDASGKSKGFGFVRY 246
Query: 251 ESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYV 310
E+ E A+KAV +GK ++GK+LYVGRAQKK ER EL+RRFE L+++ +R GV +Y+
Sbjct: 247 ETHEAAQKAVLDLHGKSINGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPIYI 306
Query: 311 KNLDDSIDDERLRKEFTPFGTITSAK 336
KNLD++IDDE+L++EF+ FG+I+ AK
Sbjct: 307 KNLDETIDDEKLKEEFSSFGSISRAK 332
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 70/181 (38%), Positives = 104/181 (57%), Gaps = 10/181 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NVF+KN +D++ + + FS +G S KV +D G SKG+GFV +ET EAA K++ +
Sbjct: 200 NVFVKNFGNDMDDEKLKEIFSGYGPTESVKVIRDASGKSKGFGFVRYETHEAAQKAVLDL 259
Query: 172 NGMLLNSKIVFVGKFIPRKER---------EKELGEKAKLF-TNVYIKNFGEDFNDEKLK 221
+G +N K+++VG+ + ER L EK++ +YIKN E +DEKLK
Sbjct: 260 HGKSINGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPIYIKNLDETIDDEKLK 319
Query: 222 EMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKK 281
E F +G+I+ +VM G+ +GFG V + S E A KAV NG+ V K L+V Q +
Sbjct: 320 EEFSSFGSISRAKVMVEVGQGKGFGVVCFSSFEDATKAVDEMNGRTVGSKPLHVTLGQAR 379
Query: 282 A 282
Sbjct: 380 C 380
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 112/223 (50%), Gaps = 16/223 (7%)
Query: 115 IKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSK-GYGFVHFETEEAANKSIEKVNG 173
+ +LD + +Y F G + ++ +D S GYG+V+F A ++ +N
Sbjct: 22 VGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTMNF 81
Query: 174 MLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSY 233
L+N K + P +R ++ G N++IKN + ++ L +F +G I S
Sbjct: 82 DLINGKPFRLMWSQP-DDRLRKSG-----VGNIFIKNLDKSIDNRALFYLFSAFGNILSC 135
Query: 234 RVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFE 293
+V+ +D S+G+ +V ++S A +A+ NG ++ + +YVGR + ER E++ R
Sbjct: 136 KVVCDDNGSKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEERAAEVRTR-- 193
Query: 294 MLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+R N++VKN + +DDE+L++ F+ +G S K
Sbjct: 194 -------DRATFTNVFVKNFGNDMDDEKLKEIFSGYGPTESVK 229
>gi|296235923|ref|XP_002763106.1| PREDICTED: polyadenylate-binding protein 5 [Callithrix jacchus]
gi|14571652|emb|CAC42812.1| Poly(A)-binding protein cytoplasmic 5 [Callithrix jacchus]
Length = 382
Score = 278 bits (712), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 150/266 (56%), Positives = 204/266 (76%), Gaps = 3/266 (1%)
Query: 73 YMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFS 132
+ D E AL+TMNFD + G+P R+MWSQ D LRKSGVGN+FIKNLDKSIDN+A++ FS
Sbjct: 68 FPADAEWALNTMNFDLINGKPFRLMWSQPDDRLRKSGVGNIFIKNLDKSIDNRALFYLFS 127
Query: 133 AFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKER 192
AFG+ILSCKV D+ G SKGY +VHF++ AAN++I +NG+ LN++ V+VG+F +ER
Sbjct: 128 AFGNILSCKVVCDDNG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEER 186
Query: 193 EKELGEKAK-LFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGKSRGFGFVAY 250
E+ + + FTNV++KN GED +DEKLKE+F YG S +V+ + GKS+GFGFV Y
Sbjct: 187 AAEVRTRDRATFTNVFVKNIGEDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVRY 246
Query: 251 ESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYV 310
E+ E A+KAV +GK VDGK+LYVGRAQKK ER EL+RRFE L+++ +R GV +Y+
Sbjct: 247 ETHEAAQKAVLDLHGKSVDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPIYI 306
Query: 311 KNLDDSIDDERLRKEFTPFGTITSAK 336
KNLD++I+DE+L++EF+ FG+I+ AK
Sbjct: 307 KNLDETINDEKLKEEFSSFGSISRAK 332
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 71/183 (38%), Positives = 109/183 (59%), Gaps = 12/183 (6%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NVF+KN+ + ID++ + + F +G S KV +D G SKG+GFV +ET EAA K++ +
Sbjct: 200 NVFVKNIGEDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVRYETHEAAQKAVLDL 259
Query: 172 NGMLLNSKIVFVGKFIPRKER---------EKELGEKAKLF-TNVYIKNFGEDFNDEKLK 221
+G ++ K+++VG+ + ER L EK++ +YIKN E NDEKLK
Sbjct: 260 HGKSVDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPIYIKNLDETINDEKLK 319
Query: 222 EMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYV--GRAQ 279
E F +G+I+ +VM G+ +GFG V + S E A KAV NG+ V K L+V G+A+
Sbjct: 320 EEFSSFGSISRAKVMMEVGQGKGFGVVCFSSFEEATKAVDEMNGRIVGSKPLHVTLGQAR 379
Query: 280 KKA 282
++
Sbjct: 380 RRC 382
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 112/223 (50%), Gaps = 16/223 (7%)
Query: 115 IKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSK-GYGFVHFETEEAANKSIEKVNG 173
+ +LD + +Y F G + ++ +D S GYG+V+F A ++ +N
Sbjct: 22 VGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTMNF 81
Query: 174 MLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSY 233
L+N K + P +R ++ G N++IKN + ++ L +F +G I S
Sbjct: 82 DLINGKPFRLMWSQP-DDRLRKSG-----VGNIFIKNLDKSIDNRALFYLFSAFGNILSC 135
Query: 234 RVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFE 293
+V+ +D S+G+ +V ++S A +A+ NG ++ + +YVGR + ER E++ R
Sbjct: 136 KVVCDDNGSKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEERAAEVRTR-- 193
Query: 294 MLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+R N++VKN+ + IDDE+L++ F +G S K
Sbjct: 194 -------DRATFTNVFVKNIGEDIDDEKLKELFCEYGPTESVK 229
>gi|357465579|ref|XP_003603074.1| Poly(A)-binding protein [Medicago truncatula]
gi|355492122|gb|AES73325.1| Poly(A)-binding protein [Medicago truncatula]
Length = 622
Score = 278 bits (711), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 152/285 (53%), Positives = 196/285 (68%), Gaps = 9/285 (3%)
Query: 57 CHQLGSGAIL----VQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGN 112
C L S L V P+ D +A+D +NF L +PIRIM+S RDPS+RKSG N
Sbjct: 56 CRDLASQQSLGYGYVNFSNPH--DAAKAMDVLNFTPLNNKPIRIMYSHRDPSVRKSGAAN 113
Query: 113 VFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVN 172
+FIKNLD++ID+KA+YDTFS FG+ILSCK+A D G SKGYGFV FE EE+A +I+K+N
Sbjct: 114 IFIKNLDRAIDHKALYDTFSIFGNILSCKIAMDASGLSKGYGFVQFENEESAQSAIDKLN 173
Query: 173 GMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITS 232
GMLLN K V+VG F +++R+ L AK F NVY+KN E D+ LK F YGTITS
Sbjct: 174 GMLLNDKPVYVGHFQRKQDRDNAL-SNAK-FNNVYVKNLSESVTDDDLKNTFGEYGTITS 231
Query: 233 YRVMNN-DGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRR 291
VM + DGKS+ FGFV +E+ + A +AV+A NGK+ D K YVG+A KK ER ELK R
Sbjct: 232 AVVMRDVDGKSKCFGFVNFENADAAAEAVEALNGKKFDDKEWYVGKALKKYERELELKER 291
Query: 292 FEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
E E ++++ G NLY+KNLDDS+ DE+L + F+ FGT+TS K
Sbjct: 292 HEQSMKETVDKFYGANLYLKNLDDSVTDEKLSELFSEFGTVTSCK 336
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 89/235 (37%), Positives = 138/235 (58%), Gaps = 15/235 (6%)
Query: 77 TERALDTMNFDALKGRPIRIMWSQR----DPSLRKSGVGNVFIKNLDKSIDNKAMYDTFS 132
+ A+D +N L +P+ + QR D +L + NV++KNL +S+ + + +TF
Sbjct: 165 AQSAIDKLNGMLLNDKPVYVGHFQRKQDRDNALSNAKFNNVYVKNLSESVTDDDLKNTFG 224
Query: 133 AFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKER 192
+G+I S V +D G SK +GFV+FE +AA +++E +NG + K +VGK + + ER
Sbjct: 225 EYGTITSAVVMRDVDGKSKCFGFVNFENADAAAEAVEALNGKKFDDKEWYVGKALKKYER 284
Query: 193 EKELGEKA---------KLF-TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGK 241
E EL E+ K + N+Y+KN + DEKL E+F +GT+TS +++ + G
Sbjct: 285 ELELKERHEQSMKETVDKFYGANLYLKNLDDSVTDEKLSELFSEFGTVTSCKILRDPQGI 344
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLK 296
SRG GFVA+ +PE A +A+ NGK V GK LYV AQKK ER L+ +F ++
Sbjct: 345 SRGSGFVAFSTPEEATRALAEMNGKMVAGKPLYVAPAQKKEERKARLQAQFSQVR 399
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 122/226 (53%), Gaps = 20/226 (8%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQD-EQGNSKGYGFVHFETEEAANKSIEK 170
++++ +LD + + +YD F+ G ++S ++ +D S GYG+V+F A K+++
Sbjct: 25 SLYVGDLDHDVTDSQLYDLFNQIGQVVSVRICRDLASQQSLGYGYVNFSNPHDAAKAMDV 84
Query: 171 VNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTI 230
+N LN+K + + + R ++ G N++IKN + + L + F +G I
Sbjct: 85 LNFTPLNNKPIRI-MYSHRDPSVRKSGA-----ANIFIKNLDRAIDHKALYDTFSIFGNI 138
Query: 231 TSYRV-MNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELK 289
S ++ M+ G S+G+GFV +E+ E A+ A+ NG ++ K +YVG Q+K +R L
Sbjct: 139 LSCKIAMDASGLSKGYGFVQFENEESAQSAIDKLNGMLLNDKPVYVGHFQRKQDRDNALS 198
Query: 290 RRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSA 335
+ N N+YVKNL +S+ D+ L+ F +GTITSA
Sbjct: 199 N-------AKFN-----NVYVKNLSESVTDDDLKNTFGEYGTITSA 232
>gi|281345691|gb|EFB21275.1| hypothetical protein PANDA_019324 [Ailuropoda melanoleuca]
Length = 381
Score = 278 bits (711), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 148/266 (55%), Positives = 204/266 (76%), Gaps = 3/266 (1%)
Query: 73 YMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFS 132
+ D E AL+TMNFD + G+P R+MWSQ D LRKSGVGN+FIKNLDK IDN+A++ FS
Sbjct: 68 FPADAEWALNTMNFDLINGKPFRLMWSQPDDRLRKSGVGNIFIKNLDKCIDNRALFYLFS 127
Query: 133 AFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKER 192
AFG+ILSCKV D+ G SKGY +VHF++ AAN++I +NG+ LN++ V+VG+F +ER
Sbjct: 128 AFGNILSCKVVCDDNG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEER 186
Query: 193 EKELGEKAK-LFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGKSRGFGFVAY 250
E+ + + FTNV++KNFG+D +DEKLKE+F YG S +V+ + GKS+GFGFV Y
Sbjct: 187 AAEVRTRDRATFTNVFVKNFGDDMDDEKLKEIFSGYGPTESVKVIRDASGKSKGFGFVRY 246
Query: 251 ESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYV 310
E+ E A+KAV +GK ++GK+LYVGRAQKK ER EL+RRFE L+++ +R GV +Y+
Sbjct: 247 ETHEAAQKAVLDLHGKSINGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPIYI 306
Query: 311 KNLDDSIDDERLRKEFTPFGTITSAK 336
KNLD++IDDE+L++EF+ FG+I+ AK
Sbjct: 307 KNLDETIDDEKLKEEFSSFGSISRAK 332
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 70/180 (38%), Positives = 104/180 (57%), Gaps = 10/180 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NVF+KN +D++ + + FS +G S KV +D G SKG+GFV +ET EAA K++ +
Sbjct: 200 NVFVKNFGDDMDDEKLKEIFSGYGPTESVKVIRDASGKSKGFGFVRYETHEAAQKAVLDL 259
Query: 172 NGMLLNSKIVFVGKFIPRKER---------EKELGEKAKLF-TNVYIKNFGEDFNDEKLK 221
+G +N K+++VG+ + ER L EK++ +YIKN E +DEKLK
Sbjct: 260 HGKSINGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPIYIKNLDETIDDEKLK 319
Query: 222 EMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKK 281
E F +G+I+ +VM G+ +GFG V + S E A KAV NG+ V K L+V Q +
Sbjct: 320 EEFSSFGSISRAKVMVEVGQGKGFGVVCFSSFEEATKAVDEMNGRTVGSKPLHVTLGQAR 379
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 112/223 (50%), Gaps = 16/223 (7%)
Query: 115 IKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSK-GYGFVHFETEEAANKSIEKVNG 173
+ +LD + +Y F G + ++ +D S GYG+V+F A ++ +N
Sbjct: 22 VGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTMNF 81
Query: 174 MLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSY 233
L+N K + P +R ++ G N++IKN + ++ L +F +G I S
Sbjct: 82 DLINGKPFRLMWSQP-DDRLRKSG-----VGNIFIKNLDKCIDNRALFYLFSAFGNILSC 135
Query: 234 RVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFE 293
+V+ +D S+G+ +V ++S A +A+ NG ++ + +YVGR + ER E++ R
Sbjct: 136 KVVCDDNGSKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEERAAEVRTR-- 193
Query: 294 MLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+R N++VKN D +DDE+L++ F+ +G S K
Sbjct: 194 -------DRATFTNVFVKNFGDDMDDEKLKEIFSGYGPTESVK 229
>gi|301787589|ref|XP_002929210.1| PREDICTED: polyadenylate-binding protein 5-like [Ailuropoda
melanoleuca]
Length = 382
Score = 278 bits (710), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 148/266 (55%), Positives = 204/266 (76%), Gaps = 3/266 (1%)
Query: 73 YMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFS 132
+ D E AL+TMNFD + G+P R+MWSQ D LRKSGVGN+FIKNLDK IDN+A++ FS
Sbjct: 68 FPADAEWALNTMNFDLINGKPFRLMWSQPDDRLRKSGVGNIFIKNLDKCIDNRALFYLFS 127
Query: 133 AFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKER 192
AFG+ILSCKV D+ G SKGY +VHF++ AAN++I +NG+ LN++ V+VG+F +ER
Sbjct: 128 AFGNILSCKVVCDDNG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEER 186
Query: 193 EKELGEKAK-LFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGKSRGFGFVAY 250
E+ + + FTNV++KNFG+D +DEKLKE+F YG S +V+ + GKS+GFGFV Y
Sbjct: 187 AAEVRTRDRATFTNVFVKNFGDDMDDEKLKEIFSGYGPTESVKVIRDASGKSKGFGFVRY 246
Query: 251 ESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYV 310
E+ E A+KAV +GK ++GK+LYVGRAQKK ER EL+RRFE L+++ +R GV +Y+
Sbjct: 247 ETHEAAQKAVLDLHGKSINGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPIYI 306
Query: 311 KNLDDSIDDERLRKEFTPFGTITSAK 336
KNLD++IDDE+L++EF+ FG+I+ AK
Sbjct: 307 KNLDETIDDEKLKEEFSSFGSISRAK 332
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 70/180 (38%), Positives = 104/180 (57%), Gaps = 10/180 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NVF+KN +D++ + + FS +G S KV +D G SKG+GFV +ET EAA K++ +
Sbjct: 200 NVFVKNFGDDMDDEKLKEIFSGYGPTESVKVIRDASGKSKGFGFVRYETHEAAQKAVLDL 259
Query: 172 NGMLLNSKIVFVGKFIPRKER---------EKELGEKAKLF-TNVYIKNFGEDFNDEKLK 221
+G +N K+++VG+ + ER L EK++ +YIKN E +DEKLK
Sbjct: 260 HGKSINGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPIYIKNLDETIDDEKLK 319
Query: 222 EMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKK 281
E F +G+I+ +VM G+ +GFG V + S E A KAV NG+ V K L+V Q +
Sbjct: 320 EEFSSFGSISRAKVMVEVGQGKGFGVVCFSSFEEATKAVDEMNGRTVGSKPLHVTLGQAR 379
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 112/223 (50%), Gaps = 16/223 (7%)
Query: 115 IKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSK-GYGFVHFETEEAANKSIEKVNG 173
+ +LD + +Y F G + ++ +D S GYG+V+F A ++ +N
Sbjct: 22 VGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTMNF 81
Query: 174 MLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSY 233
L+N K + P +R ++ G N++IKN + ++ L +F +G I S
Sbjct: 82 DLINGKPFRLMWSQP-DDRLRKSG-----VGNIFIKNLDKCIDNRALFYLFSAFGNILSC 135
Query: 234 RVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFE 293
+V+ +D S+G+ +V ++S A +A+ NG ++ + +YVGR + ER E++ R
Sbjct: 136 KVVCDDNGSKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEERAAEVRTR-- 193
Query: 294 MLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+R N++VKN D +DDE+L++ F+ +G S K
Sbjct: 194 -------DRATFTNVFVKNFGDDMDDEKLKEIFSGYGPTESVK 229
>gi|410076202|ref|XP_003955683.1| hypothetical protein KAFR_0B02500 [Kazachstania africana CBS 2517]
gi|372462266|emb|CCF56548.1| hypothetical protein KAFR_0B02500 [Kazachstania africana CBS 2517]
Length = 582
Score = 278 bits (710), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 147/258 (56%), Positives = 193/258 (74%), Gaps = 1/258 (0%)
Query: 80 ALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILS 139
A++ +N+ +KGR RIMWSQRDP+LRK G GN+FIKNL+ IDNKA+YDTFS FG+ILS
Sbjct: 97 AIERLNYTPIKGRLCRIMWSQRDPALRKKGNGNIFIKNLNADIDNKALYDTFSVFGNILS 156
Query: 140 CKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEK 199
K+A DE GNSKG+GFVHFE E AA ++I+ +NGMLLN + ++V + RKER+ +L +
Sbjct: 157 SKIATDENGNSKGFGFVHFEEEAAAKEAIDALNGMLLNGQEIYVAPHLSRKERDSQLEKT 216
Query: 200 AKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRV-MNNDGKSRGFGFVAYESPEFAEK 258
FTNVY+KN D +E+ KE+FE G +S + DGK +GFGFV YE+ E A K
Sbjct: 217 RANFTNVYVKNVPLDTTEEEFKELFEKPGKTSSIVLEKGEDGKLKGFGFVNYENHEDALK 276
Query: 259 AVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSID 318
AV+ N E G+ LYVGRAQKK ER Q LK+++E ++E++ +YQGVNL++KNLDDSID
Sbjct: 277 AVEELNNTEFKGQELYVGRAQKKYERMQALKQQYEATRLEKMAKYQGVNLFIKNLDDSID 336
Query: 319 DERLRKEFTPFGTITSAK 336
DE+L++EF PFGTITS K
Sbjct: 337 DEKLKEEFAPFGTITSTK 354
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 79/230 (34%), Positives = 124/230 (53%), Gaps = 17/230 (7%)
Query: 81 LDTMNFDALKGRPI----RIMWSQRDPSLRKSGVG--NVFIKNLDKSIDNKAMYDTFSAF 134
+D +N L G+ I + +RD L K+ NV++KN+ + + F
Sbjct: 185 IDALNGMLLNGQEIYVAPHLSRKERDSQLEKTRANFTNVYVKNVPLDTTEEEFKELFEKP 244
Query: 135 GSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREK 194
G S + + E G KG+GFV++E E A K++E++N + ++VG+ + ER +
Sbjct: 245 GKTSSIVLEKGEDGKLKGFGFVNYENHEDALKAVEELNNTEFKGQELYVGRAQKKYERMQ 304
Query: 195 ELGEKAKLF----------TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GKSR 243
L ++ + N++IKN + +DEKLKE F P+GTITS +VM + GKS+
Sbjct: 305 ALKQQYEATRLEKMAKYQGVNLFIKNLDDSIDDEKLKEEFAPFGTITSTKVMRTENGKSK 364
Query: 244 GFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFE 293
GFGFV + SPE A KA+ N + V GK LYV AQ+K R +L ++ +
Sbjct: 365 GFGFVCFSSPEEATKAITEKNQQIVAGKPLYVAIAQRKEVRRSQLAQQIQ 414
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 108/204 (52%), Gaps = 18/204 (8%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSIEK 170
++++ +LD S+ +YD FS GS+ S +V +D S GY +V+F EA +IE+
Sbjct: 41 SLYVGDLDPSVSEALLYDIFSPIGSVTSIRVCRDAITKTSLGYAYVNFADHEAGKVAIER 100
Query: 171 VNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTI 230
+N + ++ I +R+ L +K N++IKN D +++ L + F +G I
Sbjct: 101 LNYTPIKGRLC----RIMWSQRDPALRKKGN--GNIFIKNLNADIDNKALYDTFSVFGNI 154
Query: 231 TSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELK 289
S ++ ++ G S+GFGFV +E A++A+ A NG ++G+ +YV + ER +L+
Sbjct: 155 LSSKIATDENGNSKGFGFVHFEEEAAAKEAIDALNGMLLNGQEIYVAPHLSRKERDSQLE 214
Query: 290 RRFEMLKIERLNRYQGVNLYVKNL 313
+ R N+YVKN+
Sbjct: 215 K----------TRANFTNVYVKNV 228
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 64/135 (47%), Gaps = 18/135 (13%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQ 261
T++Y+ + ++ L ++F P G++TS RV + S G+ +V + E + A++
Sbjct: 40 TSLYVGDLDPSVSEALLYDIFSPIGSVTSIRVCRDAITKTSLGYAYVNFADHEAGKVAIE 99
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDER 321
N + G++ + +Q+ L + N+++KNL+ ID++
Sbjct: 100 RLNYTPIKGRLCRIMWSQRDPA----------------LRKKGNGNIFIKNLNADIDNKA 143
Query: 322 LRKEFTPFGTITSAK 336
L F+ FG I S+K
Sbjct: 144 LYDTFSVFGNILSSK 158
>gi|194386842|dbj|BAG59787.1| unnamed protein product [Homo sapiens]
Length = 350
Score = 277 bits (709), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 148/266 (55%), Positives = 204/266 (76%), Gaps = 3/266 (1%)
Query: 73 YMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFS 132
+ D E AL+TMNFD + G+P R+MWSQ D LRKSGVGN+FIKNLDKSIDN+A++ FS
Sbjct: 36 FPADAEWALNTMNFDLINGKPFRLMWSQPDDRLRKSGVGNIFIKNLDKSIDNRALFYLFS 95
Query: 133 AFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKER 192
AFG+ILSCKV D+ G SKGY +VHF++ AAN++I +NG+ LN++ V+VG+F +ER
Sbjct: 96 AFGNILSCKVVCDDNG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEER 154
Query: 193 EKELGEKAK-LFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGKSRGFGFVAY 250
E+ + + FTNV++KN G+D +DEKLKE+F YG S +V+ + GKS+GFGFV Y
Sbjct: 155 AAEVRTRDRATFTNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVRY 214
Query: 251 ESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYV 310
E+ E A+KAV +GK +DGK+LYVGRAQKK ER EL+RRFE L+++ +R GV +Y+
Sbjct: 215 ETHEAAQKAVLDLHGKSIDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPIYI 274
Query: 311 KNLDDSIDDERLRKEFTPFGTITSAK 336
KNLD++I+DE+L++EF+ FG+I+ AK
Sbjct: 275 KNLDETINDEKLKEEFSSFGSISRAK 300
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 71/183 (38%), Positives = 108/183 (59%), Gaps = 12/183 (6%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NVF+KN+ ID++ + + F +G S KV +D G SKG+GFV +ET EAA K++ +
Sbjct: 168 NVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVRYETHEAAQKAVLDL 227
Query: 172 NGMLLNSKIVFVGKFIPRKER---------EKELGEKAKLF-TNVYIKNFGEDFNDEKLK 221
+G ++ K+++VG+ + ER L EK++ +YIKN E NDEKLK
Sbjct: 228 HGKSIDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPIYIKNLDETINDEKLK 287
Query: 222 EMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYV--GRAQ 279
E F +G+I+ +VM G+ +GFG V + S E A KAV NG+ V K L+V G+A+
Sbjct: 288 EEFSSFGSISRAKVMMEVGQGKGFGVVCFSSFEEATKAVDEMNGRIVGSKPLHVTLGQAR 347
Query: 280 KKA 282
++
Sbjct: 348 RRC 350
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 107/211 (50%), Gaps = 16/211 (7%)
Query: 127 MYDTFSAFGSILSCKVAQDEQGNSK-GYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGK 185
+Y F G + ++ +D S GYG+V+F A ++ +N L+N K +
Sbjct: 2 LYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTMNFDLINGKPFRLMW 61
Query: 186 FIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDGKSRGF 245
P +R ++ G N++IKN + ++ L +F +G I S +V+ +D S+G+
Sbjct: 62 SQP-DDRLRKSG-----VGNIFIKNLDKSIDNRALFYLFSAFGNILSCKVVCDDNGSKGY 115
Query: 246 GFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQG 305
+V ++S A +A+ NG ++ + +YVGR + ER E++ R +R
Sbjct: 116 AYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEERAAEVRTR---------DRATF 166
Query: 306 VNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
N++VKN+ D IDDE+L++ F +G S K
Sbjct: 167 TNVFVKNIGDDIDDEKLKELFCEYGPTESVK 197
>gi|217074874|gb|ACJ85797.1| unknown [Medicago truncatula]
Length = 494
Score = 277 bits (708), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 150/285 (52%), Positives = 194/285 (68%), Gaps = 9/285 (3%)
Query: 57 CHQLGSGAIL----VQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGN 112
C L S L V P+ D +A+D +NF L +PIRIM+S RDPS+RKSG N
Sbjct: 56 CRDLASQQSLGYGYVNFSNPH--DAAKAMDVLNFTPLNNKPIRIMYSHRDPSVRKSGAAN 113
Query: 113 VFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVN 172
+FIKNLD++ID+KA+YDTFS FG+ILSCK+A D G SKGYGFV FE EE+A +I+K+N
Sbjct: 114 IFIKNLDRAIDHKALYDTFSIFGNILSCKIAMDASGLSKGYGFVQFENEESAQSAIDKLN 173
Query: 173 GMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITS 232
GMLLN K V+VG F +++R+ L F NVY+KN E D+ LK F YGTITS
Sbjct: 174 GMLLNDKPVYVGHFQRKQDRDNALSNAK--FNNVYVKNLSESVTDDDLKNTFGEYGTITS 231
Query: 233 YRVMNN-DGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRR 291
VM + DGKS+ FGFV +E+ + A +AV+A NGK+ D K YVG+A KK ER ELK R
Sbjct: 232 AVVMRDVDGKSKCFGFVNFENADAAAEAVEALNGKKFDDKEWYVGKALKKYERELELKER 291
Query: 292 FEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
E E ++++ G NLY+KNLDDS+ DE+L + F+ FGT+TS K
Sbjct: 292 HEQSMKETVDKFYGANLYLKNLDDSVTDEKLSELFSEFGTVTSCK 336
Score = 140 bits (354), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 89/235 (37%), Positives = 137/235 (58%), Gaps = 15/235 (6%)
Query: 77 TERALDTMNFDALKGRPIRIMWSQR----DPSLRKSGVGNVFIKNLDKSIDNKAMYDTFS 132
+ A+D +N L +P+ + QR D +L + NV++KNL +S+ + + +TF
Sbjct: 165 AQSAIDKLNGMLLNDKPVYVGHFQRKQDRDNALSNAKFNNVYVKNLSESVTDDDLKNTFG 224
Query: 133 AFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKER 192
+G+I S V +D G SK +GFV+FE +AA +++E +NG + K +VGK + + ER
Sbjct: 225 EYGTITSAVVMRDVDGKSKCFGFVNFENADAAAEAVEALNGKKFDDKEWYVGKALKKYER 284
Query: 193 EKELGEKA---------KLF-TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGK 241
E EL E+ K + N+Y+KN + DEKL E+F +GT+TS +++ + G
Sbjct: 285 ELELKERHEQSMKETVDKFYGANLYLKNLDDSVTDEKLSELFSEFGTVTSCKILRDPQGI 344
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLK 296
SRG GFVA+ +PE A +A+ NGK V GK LYV AQKK ER L +F ++
Sbjct: 345 SRGSGFVAFSTPEEATRALAEMNGKMVAGKPLYVAPAQKKEERKARLPAQFSQVR 399
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 122/226 (53%), Gaps = 20/226 (8%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQD-EQGNSKGYGFVHFETEEAANKSIEK 170
++++ +LD + + +YD F+ G ++S ++ +D S GYG+V+F A K+++
Sbjct: 25 SLYVGDLDHDVTDSQLYDLFNQIGQVVSVRICRDLASQQSLGYGYVNFSNPHDAAKAMDV 84
Query: 171 VNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTI 230
+N LN+K + + + R ++ G N++IKN + + L + F +G I
Sbjct: 85 LNFTPLNNKPIRI-MYSHRDPSVRKSGA-----ANIFIKNLDRAIDHKALYDTFSIFGNI 138
Query: 231 TSYRV-MNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELK 289
S ++ M+ G S+G+GFV +E+ E A+ A+ NG ++ K +YVG Q+K +R L
Sbjct: 139 LSCKIAMDASGLSKGYGFVQFENEESAQSAIDKLNGMLLNDKPVYVGHFQRKQDRDNALS 198
Query: 290 RRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSA 335
+ N N+YVKNL +S+ D+ L+ F +GTITSA
Sbjct: 199 N-------AKFN-----NVYVKNLSESVTDDDLKNTFGEYGTITSA 232
>gi|6102944|emb|CAB59276.1| hypothetical protein [Homo sapiens]
Length = 367
Score = 276 bits (707), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 148/266 (55%), Positives = 204/266 (76%), Gaps = 3/266 (1%)
Query: 73 YMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFS 132
+ D E AL+TMNFD + G+P R+MWSQ D LRKSGVGN+FIKNLDKSIDN+A++ FS
Sbjct: 53 FPADAEWALNTMNFDLINGKPFRLMWSQPDDRLRKSGVGNIFIKNLDKSIDNRALFYLFS 112
Query: 133 AFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKER 192
AFG+ILSCKV D+ G SKGY +VHF++ AAN++I +NG+ LN++ V+VG+F +ER
Sbjct: 113 AFGNILSCKVVCDDNG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEER 171
Query: 193 EKELGEKAK-LFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGKSRGFGFVAY 250
E+ + + FTNV++KN G+D +DEKLKE+F YG S +V+ + GKS+GFGFV Y
Sbjct: 172 AAEVRTRDRATFTNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVRY 231
Query: 251 ESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYV 310
E+ E A+KAV +GK +DGK+LYVGRAQKK ER EL+RRFE L+++ +R GV +Y+
Sbjct: 232 ETHEAAQKAVLDLHGKSIDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPIYI 291
Query: 311 KNLDDSIDDERLRKEFTPFGTITSAK 336
KNLD++I+DE+L++EF+ FG+I+ AK
Sbjct: 292 KNLDETINDEKLKEEFSSFGSISRAK 317
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 71/183 (38%), Positives = 108/183 (59%), Gaps = 12/183 (6%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NVF+KN+ ID++ + + F +G S KV +D G SKG+GFV +ET EAA K++ +
Sbjct: 185 NVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVRYETHEAAQKAVLDL 244
Query: 172 NGMLLNSKIVFVGKFIPRKER---------EKELGEKAKLF-TNVYIKNFGEDFNDEKLK 221
+G ++ K+++VG+ + ER L EK++ +YIKN E NDEKLK
Sbjct: 245 HGKSIDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPIYIKNLDETINDEKLK 304
Query: 222 EMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYV--GRAQ 279
E F +G+I+ +VM G+ +GFG V + S E A KAV NG+ V K L+V G+A+
Sbjct: 305 EEFSSFGSISRAKVMMEVGQGKGFGVVCFSSFEEATKAVDEMNGRIVGSKPLHVTLGQAR 364
Query: 280 KKA 282
++
Sbjct: 365 RRC 367
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 114/225 (50%), Gaps = 16/225 (7%)
Query: 113 VFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSK-GYGFVHFETEEAANKSIEKV 171
+++ +LD + +Y F G + ++ +D S GYG+V+F A ++ +
Sbjct: 5 LYVGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTM 64
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTIT 231
N L+N K + P +R ++ G N++IKN + ++ L +F +G I
Sbjct: 65 NFDLINGKPFRLMWSQP-DDRLRKSG-----VGNIFIKNLDKSIDNRALFYLFSAFGNIL 118
Query: 232 SYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRR 291
S +V+ +D S+G+ +V ++S A +A+ NG ++ + +YVGR + ER E++ R
Sbjct: 119 SCKVVCDDNGSKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEERAAEVRTR 178
Query: 292 FEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+R N++VKN+ D IDDE+L++ F +G S K
Sbjct: 179 ---------DRATFTNVFVKNIGDDIDDEKLKELFCEYGPTESVK 214
>gi|113461967|ref|NP_001038193.1| polyadenylate-binding protein 5 [Macaca mulatta]
gi|402910717|ref|XP_003918003.1| PREDICTED: polyadenylate-binding protein 5 [Papio anubis]
gi|50400917|sp|Q7JGR2.1|PABP5_MACMU RecName: Full=Polyadenylate-binding protein 5; Short=PABP-5;
Short=Poly(A)-binding protein 5
gi|14571725|emb|CAC42819.1| Poly(A)-binding protein cytoplasmic 5 [Macaca mulatta]
gi|14571737|emb|CAC42821.1| Poly(A)-binding protein cytoplasmic 5 [Miopithecus talapoin]
gi|90082100|dbj|BAE90331.1| unnamed protein product [Macaca fascicularis]
gi|355704969|gb|EHH30894.1| Polyadenylate-binding protein 5 [Macaca mulatta]
gi|355757521|gb|EHH61046.1| Polyadenylate-binding protein 5 [Macaca fascicularis]
Length = 382
Score = 276 bits (707), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 148/266 (55%), Positives = 204/266 (76%), Gaps = 3/266 (1%)
Query: 73 YMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFS 132
+ D E AL+TMNFD + G+P R+MWSQ D LRKSGVGN+FIKNLDKSIDN+A++ FS
Sbjct: 68 FPADAEWALNTMNFDLINGKPFRLMWSQPDDRLRKSGVGNIFIKNLDKSIDNRALFYLFS 127
Query: 133 AFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKER 192
AFG+ILSCKV D+ G SKGY +VHF++ AAN++I +NG+ LN++ V+VG+F +ER
Sbjct: 128 AFGNILSCKVVCDDNG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEER 186
Query: 193 EKELGEKAK-LFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGKSRGFGFVAY 250
E+ + + FTNV++KN G+D +DEKLKE+F YG S +V+ + GKS+GFGFV Y
Sbjct: 187 AAEVRTRDRATFTNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVRY 246
Query: 251 ESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYV 310
E+ E A+KAV +GK +DGK+LYVGRAQKK ER EL+RRFE L+++ +R GV +Y+
Sbjct: 247 ETHEAAQKAVLDLHGKSIDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPIYI 306
Query: 311 KNLDDSIDDERLRKEFTPFGTITSAK 336
KNLD++I+DE+L++EF+ FG+I+ AK
Sbjct: 307 KNLDETINDEKLKEEFSSFGSISRAK 332
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 71/183 (38%), Positives = 108/183 (59%), Gaps = 12/183 (6%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NVF+KN+ ID++ + + F +G S KV +D G SKG+GFV +ET EAA K++ +
Sbjct: 200 NVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVRYETHEAAQKAVLDL 259
Query: 172 NGMLLNSKIVFVGKFIPRKER---------EKELGEKAKLF-TNVYIKNFGEDFNDEKLK 221
+G ++ K+++VG+ + ER L EK++ +YIKN E NDEKLK
Sbjct: 260 HGKSIDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPIYIKNLDETINDEKLK 319
Query: 222 EMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYV--GRAQ 279
E F +G+I+ +VM G+ +GFG V + S E A KAV NG+ V K L+V G+A+
Sbjct: 320 EEFSSFGSISRAKVMMEVGQGKGFGVVCFSSFEEATKAVDEMNGRVVGSKPLHVTLGQAR 379
Query: 280 KKA 282
++
Sbjct: 380 RRC 382
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 112/223 (50%), Gaps = 16/223 (7%)
Query: 115 IKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSK-GYGFVHFETEEAANKSIEKVNG 173
+ +LD + +Y F G + ++ +D S GYG+V+F A ++ +N
Sbjct: 22 VGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTMNF 81
Query: 174 MLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSY 233
L+N K + P +R ++ G N++IKN + ++ L +F +G I S
Sbjct: 82 DLINGKPFRLMWSQP-DDRLRKSG-----VGNIFIKNLDKSIDNRALFYLFSAFGNILSC 135
Query: 234 RVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFE 293
+V+ +D S+G+ +V ++S A +A+ NG ++ + +YVGR + ER E++ R
Sbjct: 136 KVVCDDNGSKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEERAAEVRTR-- 193
Query: 294 MLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+R N++VKN+ D IDDE+L++ F +G S K
Sbjct: 194 -------DRATFTNVFVKNIGDDIDDEKLKELFCEYGPTESVK 229
>gi|403295651|ref|XP_003938748.1| PREDICTED: polyadenylate-binding protein 5 [Saimiri boliviensis
boliviensis]
Length = 382
Score = 276 bits (707), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 148/266 (55%), Positives = 204/266 (76%), Gaps = 3/266 (1%)
Query: 73 YMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFS 132
+ D E AL+TMNFD + G+P R+MWSQ D LRKSGVGN+FIKNLDKSIDN+A++ FS
Sbjct: 68 FPADAEWALNTMNFDLINGKPFRLMWSQPDDRLRKSGVGNIFIKNLDKSIDNRALFYLFS 127
Query: 133 AFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKER 192
AFG+ILSCKV D+ G SKGY +VHF++ AAN++I +NG+ LN++ V+VG+F +ER
Sbjct: 128 AFGNILSCKVVCDDNG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEER 186
Query: 193 EKELGEKAK-LFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGKSRGFGFVAY 250
E+ + + FTNV++KN G+D +DEKLKE+F YG S +V+ + GKS+GFGFV Y
Sbjct: 187 AAEVRTRDRATFTNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVRY 246
Query: 251 ESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYV 310
E+ E A+KAV +GK +DGK+LYVGRAQKK ER EL+RRFE L+++ +R GV +Y+
Sbjct: 247 ETHEAAQKAVLDLHGKSIDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPIYI 306
Query: 311 KNLDDSIDDERLRKEFTPFGTITSAK 336
KNLD++I+DE+L++EF+ FG+I+ AK
Sbjct: 307 KNLDETINDEKLKEEFSSFGSISRAK 332
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 71/183 (38%), Positives = 108/183 (59%), Gaps = 12/183 (6%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NVF+KN+ ID++ + + F +G S KV +D G SKG+GFV +ET EAA K++ +
Sbjct: 200 NVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVRYETHEAAQKAVLDL 259
Query: 172 NGMLLNSKIVFVGKFIPRKER---------EKELGEKAKLF-TNVYIKNFGEDFNDEKLK 221
+G ++ K+++VG+ + ER L EK++ +YIKN E NDEKLK
Sbjct: 260 HGKSIDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPIYIKNLDETINDEKLK 319
Query: 222 EMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYV--GRAQ 279
E F +G+I+ +VM G+ +GFG V + S E A KAV NG+ V K L+V G+A+
Sbjct: 320 EEFSSFGSISRAKVMLEVGQGKGFGVVCFSSFEEATKAVDEMNGRIVGSKPLHVTLGQAR 379
Query: 280 KKA 282
++
Sbjct: 380 RRC 382
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 112/223 (50%), Gaps = 16/223 (7%)
Query: 115 IKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSK-GYGFVHFETEEAANKSIEKVNG 173
+ +LD + +Y F G + ++ +D S GYG+V+F A ++ +N
Sbjct: 22 VGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTMNF 81
Query: 174 MLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSY 233
L+N K + P +R ++ G N++IKN + ++ L +F +G I S
Sbjct: 82 DLINGKPFRLMWSQP-DDRLRKSG-----VGNIFIKNLDKSIDNRALFYLFSAFGNILSC 135
Query: 234 RVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFE 293
+V+ +D S+G+ +V ++S A +A+ NG ++ + +YVGR + ER E++ R
Sbjct: 136 KVVCDDNGSKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEERAAEVRTR-- 193
Query: 294 MLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+R N++VKN+ D IDDE+L++ F +G S K
Sbjct: 194 -------DRATFTNVFVKNIGDDIDDEKLKELFCEYGPTESVK 229
>gi|397478151|ref|XP_003810419.1| PREDICTED: polyadenylate-binding protein 5-like [Pan paniscus]
Length = 382
Score = 276 bits (707), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 148/266 (55%), Positives = 204/266 (76%), Gaps = 3/266 (1%)
Query: 73 YMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFS 132
+ D E AL+TMNFD + G+P R+MWSQ D LRKSGVGN+FIKNLDKSIDN+A++ FS
Sbjct: 68 FPADAEWALNTMNFDLINGKPFRLMWSQPDDRLRKSGVGNIFIKNLDKSIDNRALFYLFS 127
Query: 133 AFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKER 192
AFG+ILSCKV D+ G SKGY +VHF++ AAN++I +NG+ LN++ V+VG+F +ER
Sbjct: 128 AFGNILSCKVVCDDNG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEER 186
Query: 193 EKELGEKAK-LFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGKSRGFGFVAY 250
E+ + + FTNV++KN G+D +DEKLKE+F YG S +V+ + GKS+GFGFV Y
Sbjct: 187 AAEVRTRDRATFTNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVRY 246
Query: 251 ESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYV 310
E+ E A+KAV +GK +DGK+LYVGRAQKK ER EL+RRFE L+++ +R GV +Y+
Sbjct: 247 ETHEAAQKAVLDLHGKSIDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPIYI 306
Query: 311 KNLDDSIDDERLRKEFTPFGTITSAK 336
KNLD++I+DE+L++EF+ FG+I+ AK
Sbjct: 307 KNLDETINDEKLKEEFSSFGSISRAK 332
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 71/183 (38%), Positives = 108/183 (59%), Gaps = 12/183 (6%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NVF+KN+ ID++ + + F +G S KV +D G SKG+GFV +ET EAA K++ +
Sbjct: 200 NVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVRYETHEAAQKAVLDL 259
Query: 172 NGMLLNSKIVFVGKFIPRKER---------EKELGEKAKLF-TNVYIKNFGEDFNDEKLK 221
+G ++ K+++VG+ + ER L EK++ +YIKN E NDEKLK
Sbjct: 260 HGKSIDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPIYIKNLDETINDEKLK 319
Query: 222 EMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYV--GRAQ 279
E F +G+I+ +VM G+ +GFG V + S E A KAV NG+ V K L+V G+A+
Sbjct: 320 EEFSSFGSISRAKVMMEVGQGKGFGVVCFSSFEEASKAVDEMNGRIVGSKPLHVTLGQAR 379
Query: 280 KKA 282
++
Sbjct: 380 RRC 382
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 112/223 (50%), Gaps = 16/223 (7%)
Query: 115 IKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSK-GYGFVHFETEEAANKSIEKVNG 173
+ +LD + +Y F G + ++ +D S GYG+V+F A ++ +N
Sbjct: 22 VGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTMNF 81
Query: 174 MLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSY 233
L+N K + P +R ++ G N++IKN + ++ L +F +G I S
Sbjct: 82 DLINGKPFRLMWSQP-DDRLRKSG-----VGNIFIKNLDKSIDNRALFYLFSAFGNILSC 135
Query: 234 RVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFE 293
+V+ +D S+G+ +V ++S A +A+ NG ++ + +YVGR + ER E++ R
Sbjct: 136 KVVCDDNGSKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEERAAEVRTR-- 193
Query: 294 MLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+R N++VKN+ D IDDE+L++ F +G S K
Sbjct: 194 -------DRATFTNVFVKNIGDDIDDEKLKELFCEYGPTESVK 229
>gi|18201888|ref|NP_543022.1| polyadenylate-binding protein 5 [Homo sapiens]
gi|115392093|ref|NP_001065269.1| polyadenylate-binding protein 5 [Pan troglodytes]
gi|332239776|ref|XP_003269075.1| PREDICTED: polyadenylate-binding protein 5 [Nomascus leucogenys]
gi|426396593|ref|XP_004064521.1| PREDICTED: polyadenylate-binding protein 5-like [Gorilla gorilla
gorilla]
gi|28201851|sp|Q96DU9.1|PABP5_HUMAN RecName: Full=Polyadenylate-binding protein 5; Short=PABP-5;
Short=Poly(A)-binding protein 5
gi|38502886|sp|P60047.1|PABP5_GORGO RecName: Full=Polyadenylate-binding protein 5; Short=PABP-5;
Short=Poly(A)-binding protein 5
gi|38502887|sp|P60048.1|PABP5_HYLLA RecName: Full=Polyadenylate-binding protein 5; Short=PABP-5;
Short=Poly(A)-binding protein 5
gi|38502888|sp|P60049.1|PABP5_PANTR RecName: Full=Polyadenylate-binding protein 5; Short=PABP-5;
Short=Poly(A)-binding protein 5
gi|38502889|sp|P60050.1|PABP5_PONPY RecName: Full=Polyadenylate-binding protein 5; Short=PABP-5;
Short=Poly(A)-binding protein 5
gi|14571705|emb|CAC42817.1| Poly(A)-binding protein cytoplasmic 5 [Gorilla gorilla]
gi|14571711|emb|CAC42818.1| Poly(A)-binding protein cytoplasmic 5 [Hylobates lar]
gi|14571756|emb|CAC42822.1| Poly(A)-binding protein cytoplasmic 5 [Pongo pygmaeus]
gi|14571764|emb|CAC42823.1| poly(A)-binding protein cytoplasmic 5 [Pan troglodytes]
gi|14572616|emb|CAC42826.1| Poly(A)-binding protein cytoplasmic 5 [Homo sapiens]
gi|38649270|gb|AAH63113.1| Poly(A) binding protein, cytoplasmic 5 [Homo sapiens]
gi|119623181|gb|EAX02776.1| poly(A) binding protein, cytoplasmic 5 [Homo sapiens]
gi|158261233|dbj|BAF82794.1| unnamed protein product [Homo sapiens]
gi|208968659|dbj|BAG74168.1| poly(A) binding protein, cytoplasmic 5 [synthetic construct]
gi|312151110|gb|ADQ32067.1| poly(A) binding protein, cytoplasmic 5 [synthetic construct]
gi|410208314|gb|JAA01376.1| poly(A) binding protein, cytoplasmic 5 [Pan troglodytes]
gi|410305648|gb|JAA31424.1| poly(A) binding protein, cytoplasmic 5 [Pan troglodytes]
Length = 382
Score = 276 bits (707), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 148/266 (55%), Positives = 204/266 (76%), Gaps = 3/266 (1%)
Query: 73 YMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFS 132
+ D E AL+TMNFD + G+P R+MWSQ D LRKSGVGN+FIKNLDKSIDN+A++ FS
Sbjct: 68 FPADAEWALNTMNFDLINGKPFRLMWSQPDDRLRKSGVGNIFIKNLDKSIDNRALFYLFS 127
Query: 133 AFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKER 192
AFG+ILSCKV D+ G SKGY +VHF++ AAN++I +NG+ LN++ V+VG+F +ER
Sbjct: 128 AFGNILSCKVVCDDNG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEER 186
Query: 193 EKELGEKAK-LFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGKSRGFGFVAY 250
E+ + + FTNV++KN G+D +DEKLKE+F YG S +V+ + GKS+GFGFV Y
Sbjct: 187 AAEVRTRDRATFTNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVRY 246
Query: 251 ESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYV 310
E+ E A+KAV +GK +DGK+LYVGRAQKK ER EL+RRFE L+++ +R GV +Y+
Sbjct: 247 ETHEAAQKAVLDLHGKSIDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPIYI 306
Query: 311 KNLDDSIDDERLRKEFTPFGTITSAK 336
KNLD++I+DE+L++EF+ FG+I+ AK
Sbjct: 307 KNLDETINDEKLKEEFSSFGSISRAK 332
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 71/183 (38%), Positives = 108/183 (59%), Gaps = 12/183 (6%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NVF+KN+ ID++ + + F +G S KV +D G SKG+GFV +ET EAA K++ +
Sbjct: 200 NVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVRYETHEAAQKAVLDL 259
Query: 172 NGMLLNSKIVFVGKFIPRKER---------EKELGEKAKLF-TNVYIKNFGEDFNDEKLK 221
+G ++ K+++VG+ + ER L EK++ +YIKN E NDEKLK
Sbjct: 260 HGKSIDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPIYIKNLDETINDEKLK 319
Query: 222 EMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYV--GRAQ 279
E F +G+I+ +VM G+ +GFG V + S E A KAV NG+ V K L+V G+A+
Sbjct: 320 EEFSSFGSISRAKVMMEVGQGKGFGVVCFSSFEEATKAVDEMNGRIVGSKPLHVTLGQAR 379
Query: 280 KKA 282
++
Sbjct: 380 RRC 382
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 112/223 (50%), Gaps = 16/223 (7%)
Query: 115 IKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSK-GYGFVHFETEEAANKSIEKVNG 173
+ +LD + +Y F G + ++ +D S GYG+V+F A ++ +N
Sbjct: 22 VGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTMNF 81
Query: 174 MLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSY 233
L+N K + P +R ++ G N++IKN + ++ L +F +G I S
Sbjct: 82 DLINGKPFRLMWSQP-DDRLRKSG-----VGNIFIKNLDKSIDNRALFYLFSAFGNILSC 135
Query: 234 RVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFE 293
+V+ +D S+G+ +V ++S A +A+ NG ++ + +YVGR + ER E++ R
Sbjct: 136 KVVCDDNGSKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEERAAEVRTR-- 193
Query: 294 MLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+R N++VKN+ D IDDE+L++ F +G S K
Sbjct: 194 -------DRATFTNVFVKNIGDDIDDEKLKELFCEYGPTESVK 229
>gi|197097448|ref|NP_001126434.1| polyadenylate-binding protein 5 [Pongo abelii]
gi|55731438|emb|CAH92432.1| hypothetical protein [Pongo abelii]
Length = 382
Score = 276 bits (706), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 148/266 (55%), Positives = 203/266 (76%), Gaps = 3/266 (1%)
Query: 73 YMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFS 132
+ D E AL+TMNFD + G+P R+MWSQ D LRKSGVGN+FIKNLDKSIDN+A++ FS
Sbjct: 68 FPADAEWALNTMNFDLINGKPFRLMWSQPDDRLRKSGVGNIFIKNLDKSIDNRALFYLFS 127
Query: 133 AFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKER 192
AFG ILSCKV D+ G SKGY +VHF++ AAN++I +NG+ LN++ V+VG+F +ER
Sbjct: 128 AFGDILSCKVVCDDNG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEER 186
Query: 193 EKELGEKAK-LFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGKSRGFGFVAY 250
E+ + + FTNV++KN G+D +DEKLKE+F YG S +V+ + GKS+GFGFV Y
Sbjct: 187 AAEVRTRDRATFTNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVRY 246
Query: 251 ESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYV 310
E+ E A+KAV +GK +DGK+LYVGRAQKK ER EL+RRFE L+++ +R GV +Y+
Sbjct: 247 ETHEAAQKAVLDLHGKSIDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPIYI 306
Query: 311 KNLDDSIDDERLRKEFTPFGTITSAK 336
KNLD++I+DE+L++EF+ FG+I+ AK
Sbjct: 307 KNLDETINDEKLKEEFSSFGSISRAK 332
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 71/183 (38%), Positives = 108/183 (59%), Gaps = 12/183 (6%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NVF+KN+ ID++ + + F +G S KV +D G SKG+GFV +ET EAA K++ +
Sbjct: 200 NVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVRYETHEAAQKAVLDL 259
Query: 172 NGMLLNSKIVFVGKFIPRKER---------EKELGEKAKLF-TNVYIKNFGEDFNDEKLK 221
+G ++ K+++VG+ + ER L EK++ +YIKN E NDEKLK
Sbjct: 260 HGKSIDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPIYIKNLDETINDEKLK 319
Query: 222 EMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYV--GRAQ 279
E F +G+I+ +VM G+ +GFG V + S E A KAV NG+ V K L+V G+A+
Sbjct: 320 EEFSSFGSISRAKVMMEVGQGKGFGVVCFSSFEEATKAVDEMNGRIVGSKPLHVTLGQAR 379
Query: 280 KKA 282
++
Sbjct: 380 RRC 382
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 112/223 (50%), Gaps = 16/223 (7%)
Query: 115 IKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSK-GYGFVHFETEEAANKSIEKVNG 173
+ +LD + +Y F G + ++ +D S GYG+V+F A ++ +N
Sbjct: 22 VGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTMNF 81
Query: 174 MLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSY 233
L+N K + P +R ++ G N++IKN + ++ L +F +G I S
Sbjct: 82 DLINGKPFRLMWSQP-DDRLRKSG-----VGNIFIKNLDKSIDNRALFYLFSAFGDILSC 135
Query: 234 RVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFE 293
+V+ +D S+G+ +V ++S A +A+ NG ++ + +YVGR + ER E++ R
Sbjct: 136 KVVCDDNGSKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEERAAEVRTR-- 193
Query: 294 MLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+R N++VKN+ D IDDE+L++ F +G S K
Sbjct: 194 -------DRATFTNVFVKNIGDDIDDEKLKELFCEYGPTESVK 229
>gi|125555900|gb|EAZ01506.1| hypothetical protein OsI_23538 [Oryza sativa Indica Group]
Length = 669
Score = 276 bits (705), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 144/288 (50%), Positives = 191/288 (66%), Gaps = 6/288 (2%)
Query: 53 SGYTCHQLGSGAILVQLGQPYML---DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSG 109
S Y C + G+ + G + D RA++ +NF + G+PIR+M+S RDP+LRKSG
Sbjct: 89 SAYVCRDIAGGSKSLGYGYVNFMSREDATRAMENLNFTVVNGKPIRVMFSNRDPTLRKSG 148
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIE 169
+ NVFIKNL+ +IDNK++Y+ FS+FG+ILS KVA D G SKGYGF+ FE+E +A +I
Sbjct: 149 LANVFIKNLEPNIDNKSLYEMFSSFGTILSSKVATDFNGKSKGYGFIQFESESSAKDAIN 208
Query: 170 KVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGT 229
+NGML N + +FVG FI R+ERE G+ A FTNVY+KN + F+D L F +G
Sbjct: 209 GLNGMLANGQKIFVGLFIRRQERE-HTGD-ANNFTNVYVKNLPKHFSDNDLLNEFSSFGA 266
Query: 230 ITSYRVMNN-DGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
ITS VM + +G SR FGFV +E E A AV+ NGK + +LYV RAQKK+ER EL
Sbjct: 267 ITSAIVMRDANGLSRCFGFVNFEKSECARNAVKNLNGKSIGDMVLYVARAQKKSERQAEL 326
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
K +FE K ++ + Q VNLY+KNLDD I+DE LRK F FG + S K
Sbjct: 327 KAKFEHDKNQKFEKLQTVNLYLKNLDDDINDEHLRKLFECFGEVASCK 374
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/196 (37%), Positives = 115/196 (58%), Gaps = 11/196 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV++KNL K + + + FS+FG+I S V +D G S+ +GFV+FE E A +++ +
Sbjct: 242 NVYVKNLPKHFSDNDLLNEFSSFGAITSAIVMRDANGLSRCFGFVNFEKSECARNAVKNL 301
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEK---------AKLFT-NVYIKNFGEDFNDEKLK 221
NG + +++V + + ER+ EL K KL T N+Y+KN +D NDE L+
Sbjct: 302 NGKSIGDMVLYVARAQKKSERQAELKAKFEHDKNQKFEKLQTVNLYLKNLDDDINDEHLR 361
Query: 222 EMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
++FE +G + S +VM ++ G+S+G GFV++ + E A A+ NGK V K LYV AQ+
Sbjct: 362 KLFECFGEVASCKVMLDSHGRSKGCGFVSFATVEDANNAILKMNGKMVGKKPLYVAVAQR 421
Query: 281 KAERTQELKRRFEMLK 296
K ER L F ++
Sbjct: 422 KEERKAFLAAHFARVR 437
>gi|224012523|ref|XP_002294914.1| polyadenlyte binding protein [Thalassiosira pseudonana CCMP1335]
gi|220969353|gb|EED87694.1| polyadenlyte binding protein [Thalassiosira pseudonana CCMP1335]
Length = 612
Score = 275 bits (703), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 146/270 (54%), Positives = 194/270 (71%), Gaps = 15/270 (5%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D ERALD+MNF +KG+P RIMWSQRDPS+R+SGVGN+F+KNL + IDNK +YDTFS FG
Sbjct: 62 DAERALDSMNFTEIKGKPCRIMWSQRDPSMRRSGVGNIFVKNLHEGIDNKQLYDTFSLFG 121
Query: 136 SILSCKVAQDEQ-GNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREK 194
+ILSCKV D+ G SKGYG+VH+ET EAA +IEK++GML++ K V VG F+ R R
Sbjct: 122 NILSCKVVTDKATGLSKGYGYVHYETNEAAASAIEKLDGMLIDGKEVQVGVFMRRDNRPG 181
Query: 195 ELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPE 254
+ +TNV+IKN ++ ++KL+E FE +G + S + G S GFGFV + + E
Sbjct: 182 QAD-----WTNVFIKNIPFEWTEDKLREEFEGFGEVVSAKPKEVQG-SLGFGFVNFATHE 235
Query: 255 FAEKAVQAWNGKEV----DG----KILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGV 306
A AV+ N KE DG K+L+VGRAQKKAER +EL+ ++E KI+R+ ++QGV
Sbjct: 236 AAAAAVKEMNDKEFTVTEDGEEVTKVLFVGRAQKKAERERELRAKYEAEKIDRIAKFQGV 295
Query: 307 NLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
NLYVKNLDD++ D+ LR EF+ GTITSA+
Sbjct: 296 NLYVKNLDDTVTDDVLRDEFSAMGTITSAR 325
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/230 (35%), Positives = 127/230 (55%), Gaps = 26/230 (11%)
Query: 81 LDTMNFDALKGRPIRI-MWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILS 139
LD M D G+ +++ ++ +RD ++ NVFIKN+ + + F FG ++S
Sbjct: 158 LDGMLID---GKEVQVGVFMRRDNRPGQADWTNVFIKNIPFEWTEDKLREEFEGFGEVVS 214
Query: 140 CKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLN--------SKIVFVGKFIPRKE 191
K ++ QG S G+GFV+F T EAA +++++N +K++FVG+ + E
Sbjct: 215 AK-PKEVQG-SLGFGFVNFATHEAAAAAVKEMNDKEFTVTEDGEEVTKVLFVGRAQKKAE 272
Query: 192 REKELGEK---------AKL-FTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--D 239
RE+EL K AK N+Y+KN + D+ L++ F GTITS RVM +
Sbjct: 273 RERELRAKYEAEKIDRIAKFQGVNLYVKNLDDTVTDDVLRDEFSAMGTITSARVMKDLKT 332
Query: 240 GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELK 289
G SRGFGFV Y +PE A +AV NGK + GK ++V AQ++ R +L+
Sbjct: 333 GISRGFGFVCYSTPEDATRAVNEMNGKIILGKPIFVALAQRRDVRRAQLE 382
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 64/136 (47%), Gaps = 20/136 (14%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQ 261
++YI + + N+ L E+F G + S RV + +S G+ +V Y AE+A+
Sbjct: 9 ASLYIGDLLPEVNEGFLFEIFNAVGPVASIRVCRDAVTRRSLGYAYVNYHQVADAERALD 68
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGV-NLYVKNLDDSIDDE 320
+ N E+ GK + +Q+ R GV N++VKNL + ID++
Sbjct: 69 SMNFTEIKGKPCRIMWSQRDPSM-----------------RRSGVGNIFVKNLHEGIDNK 111
Query: 321 RLRKEFTPFGTITSAK 336
+L F+ FG I S K
Sbjct: 112 QLYDTFSLFGNILSCK 127
>gi|222635819|gb|EEE65951.1| hypothetical protein OsJ_21832 [Oryza sativa Japonica Group]
Length = 710
Score = 275 bits (702), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 144/288 (50%), Positives = 190/288 (65%), Gaps = 6/288 (2%)
Query: 53 SGYTCHQLGSGAILVQLGQPYML---DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSG 109
S Y C + G + G + D RA++ +NF + G+PIR+M+S RDP+LRKSG
Sbjct: 112 SAYVCRDIAGGRKSLGYGYVNFMSREDATRAMENLNFTVVNGKPIRVMFSNRDPTLRKSG 171
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIE 169
+ NVFIKNL+ +IDNK++Y+ FS+FG+ILS KVA D G SKGYGF+ FE+E +A +I
Sbjct: 172 LANVFIKNLEPNIDNKSLYEMFSSFGTILSSKVATDFNGKSKGYGFIQFESESSAKDAIN 231
Query: 170 KVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGT 229
+NGML N + +FVG FI R+ERE G+ A FTNVY+KN + F+D L F +G
Sbjct: 232 GLNGMLANGQKIFVGLFIRRQERE-HTGD-ANNFTNVYVKNLPKHFSDNDLLNEFSSFGA 289
Query: 230 ITSYRVMNN-DGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
ITS VM + +G SR FGFV +E E A AV+ NGK + +LYV RAQKK+ER EL
Sbjct: 290 ITSAIVMRDANGLSRCFGFVNFEKSECARNAVKNLNGKSIGDMVLYVARAQKKSERQAEL 349
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
K +FE K ++ + Q VNLY+KNLDD I+DE LRK F FG + S K
Sbjct: 350 KAKFEHDKNQKFEKLQTVNLYLKNLDDDINDEHLRKLFECFGEVASCK 397
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 73/196 (37%), Positives = 115/196 (58%), Gaps = 11/196 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV++KNL K + + + FS+FG+I S V +D G S+ +GFV+FE E A +++ +
Sbjct: 265 NVYVKNLPKHFSDNDLLNEFSSFGAITSAIVMRDANGLSRCFGFVNFEKSECARNAVKNL 324
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEK---------AKLFT-NVYIKNFGEDFNDEKLK 221
NG + +++V + + ER+ EL K KL T N+Y+KN +D NDE L+
Sbjct: 325 NGKSIGDMVLYVARAQKKSERQAELKAKFEHDKNQKFEKLQTVNLYLKNLDDDINDEHLR 384
Query: 222 EMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
++FE +G + S +VM ++ G+S+G GFV++ + E A A+ NGK V K LYV AQ+
Sbjct: 385 KLFECFGEVASCKVMLDSHGRSKGCGFVSFATVEDANNAILKMNGKMVGKKPLYVAVAQR 444
Query: 281 KAERTQELKRRFEMLK 296
K ER L F ++
Sbjct: 445 KEERKAFLAAHFARVR 460
>gi|50725435|dbj|BAD32907.1| putative polyadenylate-binding protein [Oryza sativa Japonica
Group]
Length = 670
Score = 274 bits (701), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 144/288 (50%), Positives = 190/288 (65%), Gaps = 6/288 (2%)
Query: 53 SGYTCHQLGSGAILVQLGQPYML---DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSG 109
S Y C + G + G + D RA++ +NF + G+PIR+M+S RDP+LRKSG
Sbjct: 88 SAYVCRDIAGGRKSLGYGYVNFMSREDATRAMENLNFTVVNGKPIRVMFSNRDPTLRKSG 147
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIE 169
+ NVFIKNL+ +IDNK++Y+ FS+FG+ILS KVA D G SKGYGF+ FE+E +A +I
Sbjct: 148 LANVFIKNLEPNIDNKSLYEMFSSFGTILSSKVATDFNGKSKGYGFIQFESESSAKDAIN 207
Query: 170 KVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGT 229
+NGML N + +FVG FI R+ERE G+ A FTNVY+KN + F+D L F +G
Sbjct: 208 GLNGMLANGQKIFVGLFIRRQERE-HTGD-ANNFTNVYVKNLPKHFSDNDLLNEFSSFGA 265
Query: 230 ITSYRVMNN-DGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
ITS VM + +G SR FGFV +E E A AV+ NGK + +LYV RAQKK+ER EL
Sbjct: 266 ITSAIVMRDANGLSRCFGFVNFEKSECARNAVKNLNGKSIGDMVLYVARAQKKSERQAEL 325
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
K +FE K ++ + Q VNLY+KNLDD I+DE LRK F FG + S K
Sbjct: 326 KAKFEHDKNQKFEKLQTVNLYLKNLDDDINDEHLRKLFECFGEVASCK 373
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 73/196 (37%), Positives = 115/196 (58%), Gaps = 11/196 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV++KNL K + + + FS+FG+I S V +D G S+ +GFV+FE E A +++ +
Sbjct: 241 NVYVKNLPKHFSDNDLLNEFSSFGAITSAIVMRDANGLSRCFGFVNFEKSECARNAVKNL 300
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEK---------AKLFT-NVYIKNFGEDFNDEKLK 221
NG + +++V + + ER+ EL K KL T N+Y+KN +D NDE L+
Sbjct: 301 NGKSIGDMVLYVARAQKKSERQAELKAKFEHDKNQKFEKLQTVNLYLKNLDDDINDEHLR 360
Query: 222 EMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
++FE +G + S +VM ++ G+S+G GFV++ + E A A+ NGK V K LYV AQ+
Sbjct: 361 KLFECFGEVASCKVMLDSHGRSKGCGFVSFATVEDANNAILKMNGKMVGKKPLYVAVAQR 420
Query: 281 KAERTQELKRRFEMLK 296
K ER L F ++
Sbjct: 421 KEERKAFLAAHFARVR 436
>gi|2935338|gb|AAC39368.1| poly(A) binding protein RB47 [Chlamydomonas reinhardtii]
Length = 623
Score = 274 bits (700), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 138/262 (52%), Positives = 183/262 (69%), Gaps = 6/262 (2%)
Query: 77 TERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGS 136
+RA++T+N+ + G+P+RIMWS RDPS RKSGVGN+FIKNLDK+ID KA++DTFSAFG
Sbjct: 80 ADRAMETLNYHVVNGKPMRIMWSHRDPSARKSGVGNIFIKNLDKTIDAKALHDTFSAFGK 139
Query: 137 ILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKEL 196
ILSCKVA D G SKGYGFVHFE + AA+++I+ VN + KIV+V F R +R +
Sbjct: 140 ILSCKVATDANGVSKGYGFVHFEDQAAADRAIQTVNQKKIEGKIVYVAPFQKRADRPR-- 197
Query: 197 GEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEF 255
L+TNV++KN D D++L +M +G ITS VM +D G S+GFGF+ ++ E
Sbjct: 198 --ARTLYTNVFVKNLPADIGDDELGKMATEHGEITSAVVMKDDKGGSKGFGFINFKDAES 255
Query: 256 AEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNL-D 314
A K V+ N +E+ GK LY GRAQKK ER L+++ E K ER +YQ +NLYVKNL D
Sbjct: 256 AAKCVEYLNEREMSGKTLYAGRAQKKTEREAMLRQKAEESKQERYLKYQSMNLYVKNLSD 315
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
+ +DD+ LR+ F GTITS K
Sbjct: 316 EEVDDDALRELFANSGTITSCK 337
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 79/223 (35%), Positives = 126/223 (56%), Gaps = 15/223 (6%)
Query: 77 TERALDTMNFDALKGRPIRIMWSQR--DPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAF 134
+RA+ T+N ++G+ + + Q+ D ++ NVF+KNL I + + +
Sbjct: 167 ADRAIQTVNQKKIEGKIVYVAPFQKRADRPRARTLYTNVFVKNLPADIGDDELGKMATEH 226
Query: 135 GSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREK 194
G I S V +D++G SKG+GF++F+ E+A K +E +N ++ K ++ G+ + ERE
Sbjct: 227 GEITSAVVMKDDKGGSKGFGFINFKDAESAAKCVEYLNEREMSGKTLYAGRAQKKTEREA 286
Query: 195 ELGEKAK----------LFTNVYIKNFG-EDFNDEKLKEMFEPYGTITSYRVM-NNDGKS 242
L +KA+ N+Y+KN E+ +D+ L+E+F GTITS +VM + GKS
Sbjct: 287 MLRQKAEESKQERYLKYQSMNLYVKNLSDEEVDDDALRELFANSGTITSCKVMKDGSGKS 346
Query: 243 RGFGFVAYESPEFAEK-AVQAWNGKEVDGKILYVGRAQKKAER 284
+GFGFV + S + A + V NGK V GK LYV AQ+K R
Sbjct: 347 KGFGFVCFTSHDEATRPPVTEMNGKMVKGKPLYVALAQRKDVR 389
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 124/229 (54%), Gaps = 25/229 (10%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFET---EEAANKS 167
++++ +L+K + +++ FS+ G + S +V +D S GY +V++ + +AA+++
Sbjct: 24 SLYVGDLEKDVTEAQLFELFSSVGPVASIRVCRDAVTRRSLGYAYVNYNSALDPQAADRA 83
Query: 168 IEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPY 227
+E +N ++N K + + + R ++ G N++IKN + + + L + F +
Sbjct: 84 METLNYHVVNGKPMRI-MWSHRDPSARKSG-----VGNIFIKNLDKTIDAKALHDTFSAF 137
Query: 228 GTITSYRVMNN-DGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQ 286
G I S +V + +G S+G+GFV +E A++A+Q N K+++GKI+YV QK+A+R +
Sbjct: 138 GKILSCKVATDANGVSKGYGFVHFEDQAAADRAIQTVNQKKIEGKIVYVAPFQKRADRPR 197
Query: 287 ELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSA 335
R N++VKNL I D+ L K T G ITSA
Sbjct: 198 A--------------RTLYTNVFVKNLPADIGDDELGKMATEHGEITSA 232
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 68/139 (48%), Gaps = 23/139 (16%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYES---PEFAEK 258
+++Y+ + +D + +L E+F G + S RV + +S G+ +V Y S P+ A++
Sbjct: 23 SSLYVGDLEKDVTEAQLFELFSSVGPVASIRVCRDAVTRRSLGYAYVNYNSALDPQAADR 82
Query: 259 AVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGV-NLYVKNLDDSI 317
A++ N V+GK + + + + R GV N+++KNLD +I
Sbjct: 83 AMETLNYHVVNGKPMRIMWSHRDPSA-----------------RKSGVGNIFIKNLDKTI 125
Query: 318 DDERLRKEFTPFGTITSAK 336
D + L F+ FG I S K
Sbjct: 126 DAKALHDTFSAFGKILSCK 144
>gi|348570452|ref|XP_003471011.1| PREDICTED: polyadenylate-binding protein 5-like [Cavia porcellus]
Length = 382
Score = 273 bits (699), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 146/266 (54%), Positives = 203/266 (76%), Gaps = 3/266 (1%)
Query: 73 YMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFS 132
+ D E AL+TMNFD + G+P R+MWSQ D LRKSGVGN+FIKNLDKSIDN++++ FS
Sbjct: 68 FPADAEWALNTMNFDLINGKPFRLMWSQPDDRLRKSGVGNIFIKNLDKSIDNRSLFYLFS 127
Query: 133 AFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKER 192
AFG+ILSCKV D+ G SKGY +VHF++ AAN++I +NG+ LN++ V+VG+F +ER
Sbjct: 128 AFGNILSCKVVCDDNG-SKGYAYVHFDSLAAANRAIWHMNGVQLNNRQVYVGRFKFPEER 186
Query: 193 EKELGEKAK-LFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGKSRGFGFVAY 250
E+ + K FTNV++KN G+D +DEKLK +F YG S +++ + GKS+GFGFV Y
Sbjct: 187 AAEVRTRDKATFTNVFVKNLGDDMDDEKLKTLFSEYGQTESVKLVRDASGKSKGFGFVRY 246
Query: 251 ESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYV 310
E+ + A+KAV +GK VDGK+LYVGRAQKK ER EL+RRFE L+++ +R GV +Y+
Sbjct: 247 ETHDAAQKAVLDLHGKSVDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPIYI 306
Query: 311 KNLDDSIDDERLRKEFTPFGTITSAK 336
KNLD++ID+E+L++EF+ FG+I+ AK
Sbjct: 307 KNLDETIDEEKLKEEFSAFGSISRAK 332
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/183 (36%), Positives = 106/183 (57%), Gaps = 10/183 (5%)
Query: 107 KSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANK 166
K+ NVF+KNL +D++ + FS +G S K+ +D G SKG+GFV +ET +AA K
Sbjct: 195 KATFTNVFVKNLGDDMDDEKLKTLFSEYGQTESVKLVRDASGKSKGFGFVRYETHDAAQK 254
Query: 167 SIEKVNGMLLNSKIVFVGKFIPRKER---------EKELGEKAKLF-TNVYIKNFGEDFN 216
++ ++G ++ K+++VG+ + ER L EK++ +YIKN E +
Sbjct: 255 AVLDLHGKSVDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPIYIKNLDETID 314
Query: 217 DEKLKEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVG 276
+EKLKE F +G+I+ +VM G+ +GFG + + S E A KAV+ NG+ V K L+V
Sbjct: 315 EEKLKEEFSAFGSISRAKVMMEVGQGKGFGVICFSSFEEATKAVEEMNGRLVGSKPLHVT 374
Query: 277 RAQ 279
Q
Sbjct: 375 LGQ 377
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 114/223 (51%), Gaps = 16/223 (7%)
Query: 115 IKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSK-GYGFVHFETEEAANKSIEKVNG 173
+ +LD + +Y F G + ++ +D +S GYG+V+F A ++ +N
Sbjct: 22 VGDLDPEVTEDMLYKKFRPAGPLRFTRICRDPVTHSPLGYGYVNFRFPADAEWALNTMNF 81
Query: 174 MLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSY 233
L+N K + P +R ++ G N++IKN + ++ L +F +G I S
Sbjct: 82 DLINGKPFRLMWSQP-DDRLRKSG-----VGNIFIKNLDKSIDNRSLFYLFSAFGNILSC 135
Query: 234 RVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFE 293
+V+ +D S+G+ +V ++S A +A+ NG +++ + +YVGR + ER E++ R
Sbjct: 136 KVVCDDNGSKGYAYVHFDSLAAANRAIWHMNGVQLNNRQVYVGRFKFPEERAAEVRTR-- 193
Query: 294 MLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
++ N++VKNL D +DDE+L+ F+ +G S K
Sbjct: 194 -------DKATFTNVFVKNLGDDMDDEKLKTLFSEYGQTESVK 229
>gi|358346231|ref|XP_003637173.1| Polyadenylate-binding protein [Medicago truncatula]
gi|355503108|gb|AES84311.1| Polyadenylate-binding protein [Medicago truncatula]
Length = 622
Score = 273 bits (698), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 131/263 (49%), Positives = 191/263 (72%), Gaps = 8/263 (3%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D A++ +N+ L G+PIRIM+S RDP +RK+G N+FIKNL+ SIDNKA+++TFS FG
Sbjct: 78 DAANAMENLNYVPLNGKPIRIMFSHRDPLIRKTGFANLFIKNLETSIDNKALHETFSVFG 137
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
++LSCKVA D G+SKG+GFV F+ +++A +IEK++G L+N K V+VG F+ +ER
Sbjct: 138 NVLSCKVAMDSNGHSKGHGFVQFDNDQSAKNAIEKLDGRLMNDKKVYVGYFVRCQERS-- 195
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGKSRGFGFVAYESPE 254
+ FTNVY+KN E + +E LK++F +G ITS ++M + +G S+ FGFV ++S +
Sbjct: 196 ----SPKFTNVYVKNLSESYTNEDLKQLFNTFGVITSVKIMKDENGNSKRFGFVNFQSSD 251
Query: 255 FAEKAVQAWNGKEV-DGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNL 313
A AV+ NG DGK+L+VGRAQKK+ER ELK FE K++R ++QG NLY+KN+
Sbjct: 252 SAATAVEKLNGSTTNDGKVLFVGRAQKKSEREAELKAFFEQEKLKRYEKFQGANLYLKNI 311
Query: 314 DDSIDDERLRKEFTPFGTITSAK 336
D S+++E+L++ F+ FGTITS K
Sbjct: 312 DKSLNEEKLKELFSEFGTITSCK 334
Score = 154 bits (388), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 84/198 (42%), Positives = 128/198 (64%), Gaps = 12/198 (6%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV++KNL +S N+ + F+ FG I S K+ +DE GNSK +GFV+F++ ++A ++EK+
Sbjct: 201 NVYVKNLSESYTNEDLKQLFNTFGVITSVKIMKDENGNSKRFGFVNFQSSDSAATAVEKL 260
Query: 172 NGMLLN-SKIVFVGKFIPRKEREKELG-----EKAKLF-----TNVYIKNFGEDFNDEKL 220
NG N K++FVG+ + ERE EL EK K + N+Y+KN + N+EKL
Sbjct: 261 NGSTTNDGKVLFVGRAQKKSEREAELKAFFEQEKLKRYEKFQGANLYLKNIDKSLNEEKL 320
Query: 221 KEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQ 279
KE+F +GTITS +VM++ G+S+G GFVA+ +PE A KA+ NGK + K +YV AQ
Sbjct: 321 KELFSEFGTITSCKVMSDARGRSKGVGFVAFTTPEEASKAIDEMNGKIIGQKPVYVSVAQ 380
Query: 280 KKAERTQELKRRFEMLKI 297
+K ER +L+ F +++
Sbjct: 381 RKEERKAQLQAHFPAIQV 398
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 124/227 (54%), Gaps = 24/227 (10%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSK-GYGFVHFETEEAANKSIEK 170
++++ +L ++++ +YD FS ++S +V +D+ S GYG+V++ A ++E
Sbjct: 26 SLYVGDLQGNVNDAQLYDLFSQIAPVISVRVCRDQMTQSSLGYGYVNYSNARDAANAMEN 85
Query: 171 VNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTI 230
+N + LN K + + F R ++ G F N++IKN +++ L E F +G +
Sbjct: 86 LNYVPLNGKPIRI-MFSHRDPLIRKTG-----FANLFIKNLETSIDNKALHETFSVFGNV 139
Query: 231 TSYRV-MNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELK 289
S +V M+++G S+G GFV +++ + A+ A++ +G+ ++ K +YVG + ER+
Sbjct: 140 LSCKVAMDSNGHSKGHGFVQFDNDQSAKNAIEKLDGRLMNDKKVYVGYFVRCQERSSP-- 197
Query: 290 RRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+F N+YVKNL +S +E L++ F FG ITS K
Sbjct: 198 -KF-------------TNVYVKNLSESYTNEDLKQLFNTFGVITSVK 230
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 66/136 (48%), Gaps = 20/136 (14%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND--GKSRGFGFVAYESPEFAEKAVQ 261
+++Y+ + + ND +L ++F + S RV + S G+G+V Y + A A++
Sbjct: 25 SSLYVGDLQGNVNDAQLYDLFSQIAPVISVRVCRDQMTQSSLGYGYVNYSNARDAANAME 84
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQG-VNLYVKNLDDSIDDE 320
N ++GK + + + + + L R G NL++KNL+ SID++
Sbjct: 85 NLNYVPLNGKPIRIMFSHR-----------------DPLIRKTGFANLFIKNLETSIDNK 127
Query: 321 RLRKEFTPFGTITSAK 336
L + F+ FG + S K
Sbjct: 128 ALHETFSVFGNVLSCK 143
>gi|242096254|ref|XP_002438617.1| hypothetical protein SORBIDRAFT_10g022900 [Sorghum bicolor]
gi|241916840|gb|EER89984.1| hypothetical protein SORBIDRAFT_10g022900 [Sorghum bicolor]
Length = 631
Score = 273 bits (698), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 144/288 (50%), Positives = 198/288 (68%), Gaps = 17/288 (5%)
Query: 56 TCHQLGSGAILVQLGQPYM-----LDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGV 110
C + SG V LG Y+ + AL+ +NF L G+ IR+M+S RDPSLRKSG
Sbjct: 68 VCRDIVSG---VSLGYGYVNFYSRQEATCALEALNFAPLSGKHIRVMFSNRDPSLRKSGR 124
Query: 111 GNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEK 170
N+F+KNL+ SID+K +Y+ FS+FG+ILSCKVA D G SKGYGFV +ETEE+A +I +
Sbjct: 125 ANLFVKNLEPSIDSKNLYEMFSSFGTILSCKVATDSAGQSKGYGFVQYETEESAQDAINR 184
Query: 171 VNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTI 230
+NGML N + +FVG + R+ RE + FTNVYIKN +F+D+ L++ F P+G I
Sbjct: 185 LNGMLANDREMFVGLHMRRRNREVK-------FTNVYIKNLPTEFSDDDLRQEFAPFGEI 237
Query: 231 TSYRVMNN-DGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELK 289
TS VM + +G S+ FGFV +E PEFA +AV+ NGK ++ K LYVGRAQKKAER ELK
Sbjct: 238 TSAVVMRDVNGVSKCFGFVNFEKPEFALEAVKKANGKVINDKTLYVGRAQKKAERQAELK 297
Query: 290 RRFEML-KIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+F+ + +++++ G+NLY+KN+DDSI+DE L+ F FG +TS K
Sbjct: 298 TKFKQEDRDKKVDKPNGINLYLKNIDDSINDEGLKILFEEFGQVTSCK 345
Score = 127 bits (319), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 75/193 (38%), Positives = 107/193 (55%), Gaps = 12/193 (6%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV+IKNL + + F+ FG I S V +D G SK +GFV+FE E A ++++K
Sbjct: 212 NVYIKNLPTEFSDDDLRQEFAPFGEITSAVVMRDVNGVSKCFGFVNFEKPEFALEAVKKA 271
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKL-----------FTNVYIKNFGEDFNDEKL 220
NG ++N K ++VG+ + ER+ EL K K N+Y+KN + NDE L
Sbjct: 272 NGKVINDKTLYVGRAQKKAERQAELKTKFKQEDRDKKVDKPNGINLYLKNIDDSINDEGL 331
Query: 221 KEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQ 279
K +FE +G +TS +VM + G+S+G GFV + + E A+ NG+ V K LYVG AQ
Sbjct: 332 KILFEEFGQVTSCKVMVDAQGRSKGSGFVLFATAEAGHSAINGMNGRIVGKKPLYVGLAQ 391
Query: 280 KKAERTQELKRRF 292
K ER L F
Sbjct: 392 PKEERRAMLMAHF 404
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 58/96 (60%)
Query: 101 RDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFET 160
RD + K N+++KN+D SI+++ + F FG + SCKV D QG SKG GFV F T
Sbjct: 305 RDKKVDKPNGINLYLKNIDDSINDEGLKILFEEFGQVTSCKVMVDAQGRSKGSGFVLFAT 364
Query: 161 EEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKEL 196
EA + +I +NG ++ K ++VG P++ER L
Sbjct: 365 AEAGHSAINGMNGRIVGKKPLYVGLAQPKEERRAML 400
>gi|297821595|ref|XP_002878680.1| PAB4 binding protein 4 [Arabidopsis lyrata subsp. lyrata]
gi|297324519|gb|EFH54939.1| PAB4 binding protein 4 [Arabidopsis lyrata subsp. lyrata]
Length = 655
Score = 273 bits (697), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 144/262 (54%), Positives = 192/262 (73%), Gaps = 3/262 (1%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D E+A+ +N+ L G+ IRI +S RD S R+SGVGN+F+KNLDKS+DNK +++TFS G
Sbjct: 94 DAEKAMQKLNYSTLNGKMIRITYSSRDSSARRSGVGNLFVKNLDKSVDNKTLHETFSGCG 153
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+I+SCKVA D G S+GYGFV F+TE++A +IEK+NG +LN K +FVG F+ RKE +
Sbjct: 154 TIVSCKVAADHMGQSRGYGFVQFDTEDSAKNAIEKLNGKVLNDKQIFVGPFL-RKEERES 212
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPE 254
+K K FTNVY+KN E D++LK F YG+I+S VM + DGKSR FGFV +E+PE
Sbjct: 213 AADKMK-FTNVYVKNLSEVTTDDELKTTFGQYGSISSAVVMRDGDGKSRCFGFVNFENPE 271
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A +AV+A NGK+ D K YVG+AQKK+ER EL RR+E + N++ G+NLYVKNLD
Sbjct: 272 DAARAVEALNGKKFDDKEWYVGKAQKKSERELELSRRYEQGSSDAGNKFDGLNLYVKNLD 331
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
D++ DE+LR+ F FGTITS K
Sbjct: 332 DTVTDEKLRELFAEFGTITSCK 353
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 75/196 (38%), Positives = 114/196 (58%), Gaps = 11/196 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV++KNL + + + TF +GSI S V +D G S+ +GFV+FE E A +++E +
Sbjct: 221 NVYVKNLSEVTTDDELKTTFGQYGSISSAVVMRDGDGKSRCFGFVNFENPEDAARAVEAL 280
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLFT----------NVYIKNFGEDFNDEKLK 221
NG + K +VGK + ERE EL + + + N+Y+KN + DEKL+
Sbjct: 281 NGKKFDDKEWYVGKAQKKSERELELSRRYEQGSSDAGNKFDGLNLYVKNLDDTVTDEKLR 340
Query: 222 EMFEPYGTITSYRVMNN-DGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
E+F +GTITS +VM + G S+G GFVA+ + A + + NGK V GK LYV AQ+
Sbjct: 341 ELFAEFGTITSCKVMRDPSGTSKGSGFVAFSAASEASRVLNEMNGKMVGGKPLYVALAQR 400
Query: 281 KAERTQELKRRFEMLK 296
K ER +L+ +F ++
Sbjct: 401 KEERRAKLQAQFSQMR 416
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 126/227 (55%), Gaps = 22/227 (9%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGN-SKGYGFVHFETEEAANKSIEK 170
++++ +LD ++ + +YD F+ ++S +V +D N S GYG+V++ E A K+++K
Sbjct: 42 SLYVGDLDFNVTDSQLYDYFTEVCQVVSVRVCRDAATNTSLGYGYVNYSNTEDAEKAMQK 101
Query: 171 VNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTI 230
+N LN K++ + + R + G N+++KN + +++ L E F GTI
Sbjct: 102 LNYSTLNGKMIRI-TYSSRDSSARRSG-----VGNLFVKNLDKSVDNKTLHETFSGCGTI 155
Query: 231 TSYRV-MNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL- 288
S +V ++ G+SRG+GFV +++ + A+ A++ NGK ++ K ++VG +K ER
Sbjct: 156 VSCKVAADHMGQSRGYGFVQFDTEDSAKNAIEKLNGKVLNDKQIFVGPFLRKEERESAAD 215
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSA 335
K +F N+YVKNL + D+ L+ F +G+I+SA
Sbjct: 216 KMKF-------------TNVYVKNLSEVTTDDELKTTFGQYGSISSA 249
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 58/101 (57%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
N+++KNLD ++ ++ + + F+ FG+I SCKV +D G SKG GFV F A++ + ++
Sbjct: 324 NLYVKNLDDTVTDEKLRELFAEFGTITSCKVMRDPSGTSKGSGFVAFSAASEASRVLNEM 383
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFG 212
NG ++ K ++V ++ER +L + +I G
Sbjct: 384 NGKMVGGKPLYVALAQRKEERRAKLQAQFSQMRPAFIPGVG 424
>gi|167519406|ref|XP_001744043.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163778005|gb|EDQ91621.1| predicted protein [Monosiga brevicollis MX1]
Length = 563
Score = 273 bits (697), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 136/264 (51%), Positives = 195/264 (73%), Gaps = 6/264 (2%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D + AL+ +NF+ + +P RIMW+QR+P+ R+SG GN+FIKNL+K IDNKA+YDTFSAFG
Sbjct: 61 DAKHALEELNFEKIHDKPCRIMWAQRNPAARRSGAGNIFIKNLNKEIDNKALYDTFSAFG 120
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCKVA DE+G S+GYGFVHFE EE A K+I+ VNG +L ++V V KF+ RKERE++
Sbjct: 121 TILSCKVAADEKGESRGYGFVHFEKEEDAQKAIDTVNGKMLLKQVVTVTKFLSRKEREQQ 180
Query: 196 LGEKAKLFTNVYIKNFGEDF-NDEKLKEMFEPYGTITS-YRVMNNDGKSRGFGFVAYESP 253
G + +TN+Y+KN + + ++ LK++FE +GTITS + + + KSRGFGFV +E+
Sbjct: 181 GG---RTYTNIYVKNLPDSYATNDDLKKLFEKFGTITSTFLAKDENDKSRGFGFVNFENS 237
Query: 254 EFAEKAVQAWNGKEVD-GKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKN 312
E A AV+A N KE++ + L+VGRA KK ER +ELKR + ++ ER + + NLY+K+
Sbjct: 238 EAANAAVEAMNEKEIETDRKLFVGRAMKKHERERELKRIHDKIRQERDEKNKNSNLYIKH 297
Query: 313 LDDSIDDERLRKEFTPFGTITSAK 336
L + + ++ LR +F+ FGTITS K
Sbjct: 298 LPEDVTEDALRDKFSKFGTITSLK 321
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 86/236 (36%), Positives = 139/236 (58%), Gaps = 18/236 (7%)
Query: 76 DTERALDTMNFDALKGRPIRIM-WSQRDPSLRKSG--VGNVFIKNL-DKSIDNKAMYDTF 131
D ++A+DT+N L + + + + R ++ G N+++KNL D N + F
Sbjct: 148 DAQKAIDTVNGKMLLKQVVTVTKFLSRKEREQQGGRTYTNIYVKNLPDSYATNDDLKKLF 207
Query: 132 SAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNS-KIVFVGKFIPRK 190
FG+I S +A+DE S+G+GFV+FE EAAN ++E +N + + + +FVG+ + +
Sbjct: 208 EKFGTITSTFLAKDENDKSRGFGFVNFENSEAANAAVEAMNEKEIETDRKLFVGRAMKKH 267
Query: 191 EREKEL-----------GEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NN 238
ERE+EL EK K +N+YIK+ ED ++ L++ F +GTITS ++M +N
Sbjct: 268 ERERELKRIHDKIRQERDEKNK-NSNLYIKHLPEDVTEDALRDKFSKFGTITSLKIMTDN 326
Query: 239 DGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEM 294
+G SRGFGFV ++S + A A+Q +G +DGK LYV A +K +R ++L R M
Sbjct: 327 NGDSRGFGFVNFDSADEAAAAIQEMHGSMIDGKPLYVALALRKVDRQKQLASRRTM 382
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 121/227 (53%), Gaps = 22/227 (9%)
Query: 111 GNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSIE 169
++++ +L + +Y+ FS GS++S +V +D S GY +V+++ A ++E
Sbjct: 8 ASLYVGDLHPEVTEATLYEFFSQMGSVISIRVCRDAVSRQSLGYAYVNYQQHADAKHALE 67
Query: 170 KVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGT 229
++N ++ K + + R + G N++IKN ++ +++ L + F +GT
Sbjct: 68 ELNFEKIHDKPCRI-MWAQRNPAARRSGA-----GNIFIKNLNKEIDNKALYDTFSAFGT 121
Query: 230 ITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S +V ++ G+SRG+GFV +E E A+KA+ NGK + +++ V + + ER Q+
Sbjct: 122 ILSCKVAADEKGESRGYGFVHFEKEEDAQKAIDTVNGKMLLKQVVTVTKFLSRKEREQQG 181
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDS-IDDERLRKEFTPFGTITS 334
R + N+YVKNL DS ++ L+K F FGTITS
Sbjct: 182 GRTY-------------TNIYVKNLPDSYATNDDLKKLFEKFGTITS 215
>gi|323448756|gb|EGB04650.1| hypothetical protein AURANDRAFT_55048 [Aureococcus anophagefferens]
Length = 604
Score = 272 bits (695), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 146/273 (53%), Positives = 197/273 (72%), Gaps = 19/273 (6%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D ERALDTMN+ +K +P RIMWSQRDP+LRKSGVGNVF+KNLD SID+KA++DTFS FG
Sbjct: 65 DAERALDTMNYTLIKSKPCRIMWSQRDPTLRKSGVGNVFVKNLDASIDHKALFDTFSLFG 124
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCKVA DE G S+GYG+VH+E+E+AA +I K+N M + K V+VG F+ R ER +
Sbjct: 125 NILSCKVATDEAGRSQGYGYVHYESEDAATDAINKINSMTICDKEVYVGHFVRRTERSGQ 184
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYR-VMNNDGKSRGFGFVAYESPE 254
+TN+Y+KNF D+++E L++ FE +G ITS + DG + FG+V +E+ +
Sbjct: 185 -----SDWTNLYVKNFPADWDEETLRKAFETFGAITSCKAAAAADGSA--FGWVNFEAHD 237
Query: 255 FAEKAVQAWNG-KEVDGKI----------LYVGRAQKKAERTQELKRRFEMLKIERLNRY 303
A A+ A NG E+ G+ L+VGRAQKK ER +ELK +F+ KIER+ +Y
Sbjct: 238 AAVAAMDALNGIAELPGQAGGAPTTLKAPLFVGRAQKKIERERELKAKFDAAKIERIKKY 297
Query: 304 QGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
QGVNL+VKNLDD +DD++LR+ F +GTITSA+
Sbjct: 298 QGVNLFVKNLDDGLDDDQLRENFAEYGTITSAR 330
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/202 (37%), Positives = 112/202 (55%), Gaps = 27/202 (13%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
N+++KN D + + F FG+I SCK A G++ +G+V+FE +AA +++ +
Sbjct: 189 NLYVKNFPADWDEETLRKAFETFGAITSCKAAAAADGSA--FGWVNFEAHDAAVAAMDAL 246
Query: 172 NGM------------LLNSKIVFVGKFIPRKEREKELGEK---AKL-------FTNVYIK 209
NG+ L + + FVG+ + ERE+EL K AK+ N+++K
Sbjct: 247 NGIAELPGQAGGAPTTLKAPL-FVGRAQKKIERERELKAKFDAAKIERIKKYQGVNLFVK 305
Query: 210 NFGEDFNDEKLKEMFEPYGTITSYRVMNND--GKSRGFGFVAYESPEFAEKAVQAWNGKE 267
N + +D++L+E F YGTITS RVM G SRGFGFV + SPE A KAV N K
Sbjct: 306 NLDDGLDDDQLRENFAEYGTITSARVMREPATGTSRGFGFVCFSSPEEAAKAVTEMNNKL 365
Query: 268 VDGKILYVGRAQKKAERTQELK 289
V GK ++V AQ+K R +L+
Sbjct: 366 VLGKPIFVALAQRKEVRRAQLE 387
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 109/227 (48%), Gaps = 23/227 (10%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSIEK 170
++++ +L +++ F+ G + S +V +D S GY +V+F A ++++
Sbjct: 13 SLYVGDLATDASEGLLFEIFNTVGPVASIRVCRDAVTRRSLGYAYVNFHNVSDAERALDT 72
Query: 171 VNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTI 230
+N L+ SK I +R+ L + NV++KN + + L + F +G I
Sbjct: 73 MNYTLIKSKPC----RIMWSQRDPTL--RKSGVGNVFVKNLDASIDHKALFDTFSLFGNI 126
Query: 231 TSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELK 289
S +V ++ G+S+G+G+V YES + A A+ N + K +YVG ++ ER+
Sbjct: 127 LSCKVATDEAGRSQGYGYVHYESEDAATDAINKINSMTICDKEVYVGHFVRRTERS---- 182
Query: 290 RRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ NLYVKN D+E LRK F FG ITS K
Sbjct: 183 -----------GQSDWTNLYVKNFPADWDEETLRKAFETFGAITSCK 218
>gi|413954516|gb|AFW87165.1| hypothetical protein ZEAMMB73_979278 [Zea mays]
gi|414865260|tpg|DAA43817.1| TPA: hypothetical protein ZEAMMB73_808082 [Zea mays]
Length = 643
Score = 271 bits (692), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 142/287 (49%), Positives = 195/287 (67%), Gaps = 16/287 (5%)
Query: 56 TCHQLGSGAILVQLGQPYM-----LDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGV 110
C + SG V LG Y+ + RAL+ +NF L G+ IR+M+S RDPSLRKSG
Sbjct: 66 VCRDILSG---VSLGYGYVNFYSRQEATRALEALNFTPLIGKYIRVMFSNRDPSLRKSGR 122
Query: 111 GNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEK 170
N+F+KNL+ +ID+K +Y+ FS+FG+ILSCKVA D G SKGYGFV +ETEE+A +I
Sbjct: 123 ANLFVKNLEPNIDSKNLYEIFSSFGAILSCKVATDSAGQSKGYGFVQYETEESAEAAING 182
Query: 171 VNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTI 230
+NGML N++ +FVG + R++RE + FTNVYIKN +F+++ L++ F P+G I
Sbjct: 183 LNGMLANNRKMFVGLHMRRRDREVK-------FTNVYIKNLPTEFSEDDLRQEFAPFGEI 235
Query: 231 TSYRVMNN-DGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELK 289
TS VM + DG S+ FGFV ++ PEFA +AV+ NGK + K LYVGRAQKK ER ELK
Sbjct: 236 TSAVVMRDADGASKCFGFVNFKKPEFAIEAVEKANGKAIGDKTLYVGRAQKKEERKAELK 295
Query: 290 RRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RF + ++++ G+NLY+KN+DD I+DE L+K F FG + S K
Sbjct: 296 TRFGRGRDNKVDKPNGINLYLKNIDDGINDEGLKKLFEEFGQVASCK 342
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/192 (38%), Positives = 109/192 (56%), Gaps = 11/192 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV+IKNL + F+ FG I S V +D G SK +GFV+F+ E A +++EK
Sbjct: 210 NVYIKNLPTEFSEDDLRQEFAPFGEITSAVVMRDADGASKCFGFVNFKKPEFAIEAVEKA 269
Query: 172 NGMLLNSKIVFVGKFIPRKEREKEL------GEKAKL----FTNVYIKNFGEDFNDEKLK 221
NG + K ++VG+ ++ER+ EL G K+ N+Y+KN + NDE LK
Sbjct: 270 NGKAIGDKTLYVGRAQKKEERKAELKTRFGRGRDNKVDKPNGINLYLKNIDDGINDEGLK 329
Query: 222 EMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
++FE +G + S +VM + G+S+G GFV++ + E ++A+ NG+ V K LYVG AQ
Sbjct: 330 KLFEEFGQVASCKVMVDARGRSKGSGFVSFATAEAGQRAINRMNGRIVGKKPLYVGLAQP 389
Query: 281 KAERTQELKRRF 292
K ER L F
Sbjct: 390 KEERKAMLMAHF 401
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 59/96 (61%)
Query: 101 RDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFET 160
RD + K N+++KN+D I+++ + F FG + SCKV D +G SKG GFV F T
Sbjct: 302 RDNKVDKPNGINLYLKNIDDGINDEGLKKLFEEFGQVASCKVMVDARGRSKGSGFVSFAT 361
Query: 161 EEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKEL 196
EA ++I ++NG ++ K ++VG P++ER+ L
Sbjct: 362 AEAGQRAINRMNGRIVGKKPLYVGLAQPKEERKAML 397
>gi|46128087|ref|XP_388597.1| hypothetical protein FG08421.1 [Gibberella zeae PH-1]
Length = 784
Score = 271 bits (692), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 128/222 (57%), Positives = 170/222 (76%), Gaps = 1/222 (0%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D E+AL+ +N+ +KGRP RIMWSQRDP+LRK+G GNVFIKNLD +IDNKA++DTF+AFG
Sbjct: 112 DGEKALEELNYTIIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDVAIDNKALHDTFAAFG 171
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCKVAQDE G SKGYGFVH+ET+EAA+++I+ VNGMLLN K V+VG IP+K+R+ +
Sbjct: 172 NILSCKVAQDETGASKGYGFVHYETDEAASQAIKHVNGMLLNEKKVYVGHHIPKKDRQSK 231
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPE 254
E FTNVY+KN D ++ +++FE YG +TS + + +GKSRGFGFV + + E
Sbjct: 232 FEEMKANFTNVYVKNIAADVTEDDFRQLFEKYGDVTSSSLARDQEGKSRGFGFVNFTTHE 291
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLK 296
A KAV N K+ G+ LYVGRAQKK ER +EL++ +E +
Sbjct: 292 SASKAVDELNNKDFHGQDLYVGRAQKKHEREEELRKSYEAAR 333
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 119/226 (52%), Gaps = 18/226 (7%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSIEK 170
++++ LD S+ +++ FS G++ S +V +D S GY +V++ K++E+
Sbjct: 60 SLYVGELDPSVTEAMLFELFSQIGAVASIRVCRDAVTRRSLGYAYVNYNATPDGEKALEE 119
Query: 171 VNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTI 230
+N ++ + I +R+ L + + NV+IKN +++ L + F +G I
Sbjct: 120 LNYTIIKGRPCR----IMWSQRDPALRKTGQ--GNVFIKNLDVAIDNKALHDTFAAFGNI 173
Query: 231 TSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELK 289
S +V ++ G S+G+GFV YE+ E A +A++ NG ++ K +YVG K +R +
Sbjct: 174 LSCKVAQDETGASKGYGFVHYETDEAASQAIKHVNGMLLNEKKVYVGHHIPKKDR----Q 229
Query: 290 RRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSA 335
+FE +K N+YVKN+ + ++ R+ F +G +TS+
Sbjct: 230 SKFEEMKANF------TNVYVKNIAADVTEDDFRQLFEKYGDVTSS 269
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 33/50 (66%)
Query: 240 GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELK 289
GKS+GFGFV + +P+ A KAV N + +GK LYV AQ+K R +L+
Sbjct: 412 GKSKGFGFVCFSNPDDATKAVAEMNQRMFNGKPLYVALAQRKDVRKSQLE 461
Score = 44.3 bits (103), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 58/135 (42%), Gaps = 18/135 (13%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQ 261
++Y+ + L E+F G + S RV + +S G+ +V Y + EKA++
Sbjct: 59 ASLYVGELDPSVTEAMLFELFSQIGAVASIRVCRDAVTRRSLGYAYVNYNATPDGEKALE 118
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDER 321
N + G+ + +Q+ L + N+++KNLD +ID++
Sbjct: 119 ELNYTIIKGRPCRIMWSQRDPA----------------LRKTGQGNVFIKNLDVAIDNKA 162
Query: 322 LRKEFTPFGTITSAK 336
L F FG I S K
Sbjct: 163 LHDTFAAFGNILSCK 177
>gi|13430610|gb|AAK25927.1|AF360217_1 putative poly(A) binding protein [Arabidopsis thaliana]
Length = 662
Score = 270 bits (691), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 143/262 (54%), Positives = 191/262 (72%), Gaps = 3/262 (1%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D E+A+ +N+ L G+ IRI +S RD S R+SGVGN+F+KNLDKS+DNK +++ FS G
Sbjct: 99 DAEKAMQKLNYSYLNGKMIRITYSSRDSSARRSGVGNLFVKNLDKSVDNKTLHEAFSGCG 158
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+I+SCKVA D G S+GYGFV F+TE++A +IEK+NG +LN K +FVG F+ RKE +
Sbjct: 159 TIVSCKVATDHMGQSRGYGFVQFDTEDSAKNAIEKLNGKVLNDKQIFVGPFL-RKEERES 217
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPE 254
+K K FTNVY+KN E D++LK F YG+I+S VM + DGKSR FGFV +E+PE
Sbjct: 218 AADKMK-FTNVYVKNLSEATTDDELKTTFGQYGSISSAVVMRDGDGKSRCFGFVNFENPE 276
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A +AV+A NGK+ D K YVG+AQKK+ER EL RR+E + N++ G+NLYVKNLD
Sbjct: 277 DAARAVEALNGKKFDDKEWYVGKAQKKSERELELSRRYEQGSSDGGNKFDGLNLYVKNLD 336
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
D++ DE+LR+ F FGTITS K
Sbjct: 337 DTVTDEKLRELFAEFGTITSCK 358
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 77/208 (37%), Positives = 120/208 (57%), Gaps = 11/208 (5%)
Query: 100 QRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFE 159
+R+ + K NV++KNL ++ + + TF +GSI S V +D G S+ +GFV+FE
Sbjct: 214 ERESAADKMKFTNVYVKNLSEATTDDELKTTFGQYGSISSAVVMRDGDGKSRCFGFVNFE 273
Query: 160 TEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFT----------NVYIK 209
E A +++E +NG + K +VGK + ERE EL + + + N+Y+K
Sbjct: 274 NPEDAARAVEALNGKKFDDKEWYVGKAQKKSERELELSRRYEQGSSDGGNKFDGLNLYVK 333
Query: 210 NFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGKSRGFGFVAYESPEFAEKAVQAWNGKEV 268
N + DEKL+E+F +GTITS +VM + G S+G GFVA+ + A + + NGK V
Sbjct: 334 NLDDTVTDEKLRELFAEFGTITSCKVMRDPSGTSKGSGFVAFSAASEASRVLNEMNGKMV 393
Query: 269 DGKILYVGRAQKKAERTQELKRRFEMLK 296
GK LYV AQ+K ER +L+ +F ++
Sbjct: 394 GGKPLYVALAQRKEERRAKLQAQFSQMR 421
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 126/227 (55%), Gaps = 22/227 (9%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGN-SKGYGFVHFETEEAANKSIEK 170
++++ +LD ++ + +YD F+ ++S +V +D N S GYG+V++ + A K+++K
Sbjct: 47 SLYVGDLDFNVTDSQLYDYFTEVCQVVSVRVCRDAATNTSLGYGYVNYSNTDDAEKAMQK 106
Query: 171 VNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTI 230
+N LN K++ + + R + G N+++KN + +++ L E F GTI
Sbjct: 107 LNYSYLNGKMIRI-TYSSRDSSARRSG-----VGNLFVKNLDKSVDNKTLHEAFSGCGTI 160
Query: 231 TSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL- 288
S +V + G+SRG+GFV +++ + A+ A++ NGK ++ K ++VG +K ER
Sbjct: 161 VSCKVATDHMGQSRGYGFVQFDTEDSAKNAIEKLNGKVLNDKQIFVGPFLRKEERESAAD 220
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSA 335
K +F N+YVKNL ++ D+ L+ F +G+I+SA
Sbjct: 221 KMKF-------------TNVYVKNLSEATTDDELKTTFGQYGSISSA 254
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 58/101 (57%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
N+++KNLD ++ ++ + + F+ FG+I SCKV +D G SKG GFV F A++ + ++
Sbjct: 329 NLYVKNLDDTVTDEKLRELFAEFGTITSCKVMRDPSGTSKGSGFVAFSAASEASRVLNEM 388
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFG 212
NG ++ K ++V ++ER +L + +I G
Sbjct: 389 NGKMVGGKPLYVALAQRKEERRAKLQAQFSQMRPAFIPGVG 429
>gi|15227815|ref|NP_179916.1| poly(A) binding protein 4 [Arabidopsis thaliana]
gi|2642429|gb|AAB87097.1| putative poly(A) binding protein [Arabidopsis thaliana]
gi|15292851|gb|AAK92796.1| putative poly(A) binding protein [Arabidopsis thaliana]
gi|19310779|gb|AAL85120.1| putative poly(A) binding protein [Arabidopsis thaliana]
gi|330252352|gb|AEC07446.1| poly(A) binding protein 4 [Arabidopsis thaliana]
Length = 662
Score = 270 bits (691), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 143/262 (54%), Positives = 191/262 (72%), Gaps = 3/262 (1%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D E+A+ +N+ L G+ IRI +S RD S R+SGVGN+F+KNLDKS+DNK +++ FS G
Sbjct: 99 DAEKAMQKLNYSYLNGKMIRITYSSRDSSARRSGVGNLFVKNLDKSVDNKTLHEAFSGCG 158
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+I+SCKVA D G S+GYGFV F+TE++A +IEK+NG +LN K +FVG F+ RKE +
Sbjct: 159 TIVSCKVATDHMGQSRGYGFVQFDTEDSAKNAIEKLNGKVLNDKQIFVGPFL-RKEERES 217
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPE 254
+K K FTNVY+KN E D++LK F YG+I+S VM + DGKSR FGFV +E+PE
Sbjct: 218 AADKMK-FTNVYVKNLSEATTDDELKTTFGQYGSISSAVVMRDGDGKSRCFGFVNFENPE 276
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A +AV+A NGK+ D K YVG+AQKK+ER EL RR+E + N++ G+NLYVKNLD
Sbjct: 277 DAARAVEALNGKKFDDKEWYVGKAQKKSERELELSRRYEQGSSDGGNKFDGLNLYVKNLD 336
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
D++ DE+LR+ F FGTITS K
Sbjct: 337 DTVTDEKLRELFAEFGTITSCK 358
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 77/208 (37%), Positives = 120/208 (57%), Gaps = 11/208 (5%)
Query: 100 QRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFE 159
+R+ + K NV++KNL ++ + + TF +GSI S V +D G S+ +GFV+FE
Sbjct: 214 ERESAADKMKFTNVYVKNLSEATTDDELKTTFGQYGSISSAVVMRDGDGKSRCFGFVNFE 273
Query: 160 TEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFT----------NVYIK 209
E A +++E +NG + K +VGK + ERE EL + + + N+Y+K
Sbjct: 274 NPEDAARAVEALNGKKFDDKEWYVGKAQKKSERELELSRRYEQGSSDGGNKFDGLNLYVK 333
Query: 210 NFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGKSRGFGFVAYESPEFAEKAVQAWNGKEV 268
N + DEKL+E+F +GTITS +VM + G S+G GFVA+ + A + + NGK V
Sbjct: 334 NLDDTVTDEKLRELFAEFGTITSCKVMRDPSGTSKGSGFVAFSAASEASRVLNEMNGKMV 393
Query: 269 DGKILYVGRAQKKAERTQELKRRFEMLK 296
GK LYV AQ+K ER +L+ +F ++
Sbjct: 394 GGKPLYVALAQRKEERRAKLQAQFSQMR 421
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 126/227 (55%), Gaps = 22/227 (9%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGN-SKGYGFVHFETEEAANKSIEK 170
++++ +LD ++ + +YD F+ ++S +V +D N S GYG+V++ + A K+++K
Sbjct: 47 SLYVGDLDFNVTDSQLYDYFTEVCQVVSVRVCRDAATNTSLGYGYVNYSNTDDAEKAMQK 106
Query: 171 VNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTI 230
+N LN K++ + + R + G N+++KN + +++ L E F GTI
Sbjct: 107 LNYSYLNGKMIRI-TYSSRDSSARRSG-----VGNLFVKNLDKSVDNKTLHEAFSGCGTI 160
Query: 231 TSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL- 288
S +V + G+SRG+GFV +++ + A+ A++ NGK ++ K ++VG +K ER
Sbjct: 161 VSCKVATDHMGQSRGYGFVQFDTEDSAKNAIEKLNGKVLNDKQIFVGPFLRKEERESAAD 220
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSA 335
K +F N+YVKNL ++ D+ L+ F +G+I+SA
Sbjct: 221 KMKF-------------TNVYVKNLSEATTDDELKTTFGQYGSISSA 254
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 58/101 (57%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
N+++KNLD ++ ++ + + F+ FG+I SCKV +D G SKG GFV F A++ + ++
Sbjct: 329 NLYVKNLDDTVTDEKLRELFAEFGTITSCKVMRDPSGTSKGSGFVAFSAASEASRVLNEM 388
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFG 212
NG ++ K ++V ++ER +L + +I G
Sbjct: 389 NGKMVGGKPLYVALAQRKEERRAKLQAQFSQMRPAFIPGVG 429
>gi|395856757|ref|XP_003800785.1| PREDICTED: LOW QUALITY PROTEIN: polyadenylate-binding protein
4-like [Otolemur garnettii]
Length = 359
Score = 270 bits (691), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 141/274 (51%), Positives = 187/274 (68%), Gaps = 36/274 (13%)
Query: 69 LGQPY-----MLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSID 123
LG Y + D ++ALDTMNFD + G+ IR+MWSQRD LR+SG+GNV
Sbjct: 51 LGYAYVNFLQLADAQKALDTMNFDVVNGKSIRLMWSQRDAYLRRSGIGNVM--------- 101
Query: 124 NKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFV 183
D+QG SKGY FVHF+ + AA+++IE++NG L VFV
Sbjct: 102 --------------------SDDQG-SKGYAFVHFQNQSAADRAIEEMNGRQLKDCKVFV 140
Query: 184 GKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKS 242
G+F RK+RE EL KA FTNVYIKNFGED +DEKLKE+F YG S +VM ++ GKS
Sbjct: 141 GRFKNRKDREAELRNKAGEFTNVYIKNFGEDMDDEKLKEVFSKYGRTLSVKVMTDSSGKS 200
Query: 243 RGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNR 302
+GFGFV++++ E A+KAV+ NGK+++G++++VGRAQKK ER ELK+ FE LK ER++
Sbjct: 201 KGFGFVSFDNHEAAKKAVKEMNGKDINGQLIFVGRAQKKVERQAELKQMFEQLKKERIHG 260
Query: 303 YQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
QGV LY+KNLDD+IDDE+LRKEF+ FG+I+ K
Sbjct: 261 CQGVKLYIKNLDDTIDDEKLRKEFSSFGSISRVK 294
Score = 127 bits (319), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 80/233 (34%), Positives = 131/233 (56%), Gaps = 17/233 (7%)
Query: 77 TERALDTMNFDALKGRPIRI----MWSQRDPSLR-KSG-VGNVFIKNLDKSIDNKAMYDT 130
+RA++ MN LK + + R+ LR K+G NV+IKN + +D++ + +
Sbjct: 121 ADRAIEEMNGRQLKDCKVFVGRFKNRKDREAELRNKAGEFTNVYIKNFGEDMDDEKLKEV 180
Query: 131 FSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRK 190
FS +G LS KV D G SKG+GFV F+ EAA K+++++NG +N +++FVG+ +
Sbjct: 181 FSKYGRTLSVKVMTDSSGKSKGFGFVSFDNHEAAKKAVKEMNGKDINGQLIFVGRAQKKV 240
Query: 191 EREKELGE------KAKLF----TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDG 240
ER+ EL + K ++ +YIKN + +DEKL++ F +G+I+ +VM G
Sbjct: 241 ERQAELKQMFEQLKKERIHGCQGVKLYIKNLDDTIDDEKLRKEFSSFGSISRVKVMQEGG 300
Query: 241 KSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKK-AERTQELKRRF 292
+S+GFG + + S E A KA+ NG + K L + A + ER L R++
Sbjct: 301 QSKGFGLICFSSLEEATKAMTEMNGHILGSKPLSIALAHRHYXERKIYLTRQY 353
>gi|293337013|ref|NP_001169661.1| uncharacterized protein LOC100383542 [Zea mays]
gi|224030689|gb|ACN34420.1| unknown [Zea mays]
Length = 442
Score = 270 bits (690), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 142/287 (49%), Positives = 195/287 (67%), Gaps = 16/287 (5%)
Query: 56 TCHQLGSGAILVQLGQPYM-----LDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGV 110
C + SG V LG Y+ + RAL+ +NF L G+ IR+M+S RDPSLRKSG
Sbjct: 33 VCRDILSG---VSLGYGYVNFYSRQEATRALEALNFTPLIGKYIRVMFSNRDPSLRKSGR 89
Query: 111 GNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEK 170
N+F+KNL+ +ID+K +Y+ FS+FG+ILSCKVA D G SKGYGFV +ETEE+A +I
Sbjct: 90 ANLFVKNLEPNIDSKNLYEIFSSFGAILSCKVATDSAGQSKGYGFVQYETEESAEAAING 149
Query: 171 VNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTI 230
+NGML N++ +FVG + R++RE + FTNVYIKN +F+++ L++ F P+G I
Sbjct: 150 LNGMLANNRKMFVGLHMRRRDREVK-------FTNVYIKNLPTEFSEDDLRQEFAPFGEI 202
Query: 231 TSYRVMNN-DGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELK 289
TS VM + DG S+ FGFV ++ PEFA +AV+ NGK + K LYVGRAQKK ER ELK
Sbjct: 203 TSAVVMRDADGASKCFGFVNFKKPEFAIEAVEKANGKAIGDKTLYVGRAQKKEERKAELK 262
Query: 290 RRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RF + ++++ G+NLY+KN+DD I+DE L+K F FG + S K
Sbjct: 263 TRFGRGRDNKVDKPNGINLYLKNIDDGINDEGLKKLFEEFGQVASCK 309
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 73/192 (38%), Positives = 109/192 (56%), Gaps = 11/192 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV+IKNL + F+ FG I S V +D G SK +GFV+F+ E A +++EK
Sbjct: 177 NVYIKNLPTEFSEDDLRQEFAPFGEITSAVVMRDADGASKCFGFVNFKKPEFAIEAVEKA 236
Query: 172 NGMLLNSKIVFVGKFIPRKEREKEL------GEKAKL----FTNVYIKNFGEDFNDEKLK 221
NG + K ++VG+ ++ER+ EL G K+ N+Y+KN + NDE LK
Sbjct: 237 NGKAIGDKTLYVGRAQKKEERKAELKTRFGRGRDNKVDKPNGINLYLKNIDDGINDEGLK 296
Query: 222 EMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
++FE +G + S +VM + G+S+G GFV++ + E ++A+ NG+ V K LYVG AQ
Sbjct: 297 KLFEEFGQVASCKVMVDARGRSKGSGFVSFATAEAGQRAINRMNGRIVGKKPLYVGLAQP 356
Query: 281 KAERTQELKRRF 292
K ER L F
Sbjct: 357 KEERKAMLMAHF 368
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 59/96 (61%)
Query: 101 RDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFET 160
RD + K N+++KN+D I+++ + F FG + SCKV D +G SKG GFV F T
Sbjct: 269 RDNKVDKPNGINLYLKNIDDGINDEGLKKLFEEFGQVASCKVMVDARGRSKGSGFVSFAT 328
Query: 161 EEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKEL 196
EA ++I ++NG ++ K ++VG P++ER+ L
Sbjct: 329 AEAGQRAINRMNGRIVGKKPLYVGLAQPKEERKAML 364
>gi|318087158|gb|ADV40171.1| putative polyA binding protein cytoplasmic 1 isoform 1 [Latrodectus
hesperus]
Length = 217
Score = 269 bits (687), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 128/162 (79%), Positives = 142/162 (87%), Gaps = 2/162 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP +D ERALDTMNFD +KGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI
Sbjct: 55 GYAYVNFQQP--VDAERALDTMNFDMVKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 112
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKAMYDTFSAFG+ILSCKVA DE+ NSKGYGFVHFETEEAAN +I+KVNGMLLN + VF
Sbjct: 113 DNKAMYDTFSAFGNILSCKVATDEESNSKGYGFVHFETEEAANNAIQKVNGMLLNGRKVF 172
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMF 224
VGKF+PR EREK+LG+KA+ F NVYIKNFG+D +DEKL+EM
Sbjct: 173 VGKFVPRSEREKQLGQKARRFMNVYIKNFGDDLDDEKLREML 214
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 120/220 (54%), Gaps = 24/220 (10%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGN-SKGYGFVHFETEEAANKSI 168
V ++++ +L + +++ FS+ G +LS +V +D S GY +V+F+ A +++
Sbjct: 12 VASLYVGDLHNDVTEAMLFEKFSSAGPVLSIRVCRDLIARRSLGYAYVNFQQPVDAERAL 71
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N ++ + + I +R+ L + NV+IKN + +++ + + F +G
Sbjct: 72 DTMNFDMVKGRPIR----IMWSQRDPSLRKSG--VGNVFIKNLDKSIDNKAMYDTFSAFG 125
Query: 229 TITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQE 287
I S +V ++ S+G+GFV +E+ E A A+Q NG ++G+ ++VG+ ++ER ++
Sbjct: 126 NILSCKVATDEESNSKGYGFVHFETEEAANNAIQKVNGMLLNGRKVFVGKFVPRSEREKQ 185
Query: 288 L---KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRK 324
L RRF +N+Y+KN D +DDE+LR+
Sbjct: 186 LGQKARRF-------------MNVYIKNFGDDLDDEKLRE 212
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 63/136 (46%), Gaps = 20/136 (14%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQ 261
++Y+ + D + L E F G + S RV + +S G+ +V ++ P AE+A+
Sbjct: 13 ASLYVGDLHNDVTEAMLFEKFSSAGPVLSIRVCRDLIARRSLGYAYVNFQQPVDAERALD 72
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGV-NLYVKNLDDSIDDE 320
N V G+ + + +Q+ R GV N+++KNLD SID++
Sbjct: 73 TMNFDMVKGRPIRIMWSQRDPSL-----------------RKSGVGNVFIKNLDKSIDNK 115
Query: 321 RLRKEFTPFGTITSAK 336
+ F+ FG I S K
Sbjct: 116 AMYDTFSAFGNILSCK 131
>gi|431922856|gb|ELK19640.1| Polyadenylate-binding protein 5 [Pteropus alecto]
Length = 373
Score = 268 bits (686), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 144/265 (54%), Positives = 198/265 (74%), Gaps = 10/265 (3%)
Query: 73 YMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFS 132
+ D E AL+TMNFD + G+P R+MWSQ D LRKSGVGN+FIKNLDKSIDN+A++ FS
Sbjct: 68 FPADAEWALNTMNFDLINGKPFRLMWSQPDDRLRKSGVGNIFIKNLDKSIDNRALFYLFS 127
Query: 133 AFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKER 192
AFG+ILSCKV D+ G SKGY +VHF++ AAN++I +NG+ LN++ V+ + ++R
Sbjct: 128 AFGNILSCKVVCDDNG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYRAAEVRTRDR 186
Query: 193 EKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGKSRGFGFVAYE 251
FTNV++KNFG+D +DEKLK++F YG S +V+ + GKS+GFGFV YE
Sbjct: 187 AT--------FTNVFVKNFGDDMDDEKLKDIFSEYGPTESVKVIRDASGKSKGFGFVRYE 238
Query: 252 SPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVK 311
+ E A+KAV +GK +DGK+LYVGRAQKK ER EL+RRFE L+++ +R GV +Y+K
Sbjct: 239 THEAAQKAVLDLHGKSIDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPVYIK 298
Query: 312 NLDDSIDDERLRKEFTPFGTITSAK 336
NLD++IDDE+L++EF+ FG+I+ AK
Sbjct: 299 NLDETIDDEKLKEEFSSFGSISRAK 323
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 71/180 (39%), Positives = 104/180 (57%), Gaps = 10/180 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NVF+KN +D++ + D FS +G S KV +D G SKG+GFV +ET EAA K++ +
Sbjct: 191 NVFVKNFGDDMDDEKLKDIFSEYGPTESVKVIRDASGKSKGFGFVRYETHEAAQKAVLDL 250
Query: 172 NGMLLNSKIVFVGKFIPRKER---------EKELGEKAKLF-TNVYIKNFGEDFNDEKLK 221
+G ++ K+++VG+ + ER L EK++ VYIKN E +DEKLK
Sbjct: 251 HGKSIDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPVYIKNLDETIDDEKLK 310
Query: 222 EMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKK 281
E F +G+I+ +VM G+ +GFG V Y S E A KAV NG+ + K L+V Q +
Sbjct: 311 EEFSSFGSISRAKVMVEVGQGKGFGVVCYSSFEEATKAVDEMNGRIMGSKPLHVTLGQAR 370
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 106/223 (47%), Gaps = 25/223 (11%)
Query: 115 IKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSK-GYGFVHFETEEAANKSIEKVNG 173
+ +LD + +Y F G + ++ +D S GYG+V+F A ++ +N
Sbjct: 22 VGDLDPDVTEDMLYKKFRPAGPLRFTRICRDPVTRSPLGYGYVNFRFPADAEWALNTMNF 81
Query: 174 MLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSY 233
L+N K + P +R ++ G N++IKN + ++ L +F +G I S
Sbjct: 82 DLINGKPFRLMWSQP-DDRLRKSG-----VGNIFIKNLDKSIDNRALFYLFSAFGNILSC 135
Query: 234 RVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFE 293
+V+ +D S+G+ +V ++S A +A+ NG ++ + +Y R E++ R
Sbjct: 136 KVVCDDNGSKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVY---------RAAEVRTR-- 184
Query: 294 MLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+R N++VKN D +DDE+L+ F+ +G S K
Sbjct: 185 -------DRATFTNVFVKNFGDDMDDEKLKDIFSEYGPTESVK 220
>gi|294892363|ref|XP_002774026.1| Polyadenylate-binding protein, putative [Perkinsus marinus ATCC
50983]
gi|239879230|gb|EER05842.1| Polyadenylate-binding protein, putative [Perkinsus marinus ATCC
50983]
Length = 636
Score = 268 bits (685), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 143/285 (50%), Positives = 190/285 (66%), Gaps = 26/285 (9%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D ERALDT+N+ ++G+ RIMWS RDP+LRK+G NVF+KNLDK+IDNKA+YDTFS FG
Sbjct: 87 DAERALDTLNYSPIRGKQCRIMWSHRDPTLRKAGNANVFVKNLDKTIDNKALYDTFSLFG 146
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCKVA D+ G S+GYGFVHFE +E+A+K+I K+NGM++ K V+VG F ER ++
Sbjct: 147 NILSCKVATDDDGKSRGYGFVHFENDESAHKAITKLNGMMIGEKAVYVGPFQKHAERAEQ 206
Query: 196 LGEKAKLFTNVYIKNFGEDF-NDEKLKEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPE 254
G++ + FTNVYIK+ E + +E +++ FE +G ITS + D K R F FV YE +
Sbjct: 207 HGDEPRKFTNVYIKHLPESWTTEEDVQKAFEEFGKITSVAI-QTDRKGRRFAFVNYEDFD 265
Query: 255 FAEKAVQAWNGK------EVD-GKI----------------LYVGRAQKKAERTQELKRR 291
A KAV+A NGK E+D GK LYV RAQ K ER+ EL+ +
Sbjct: 266 SAAKAVEAMNGKDMRTQEEIDAGKGEEESTEEGSDEMPEYKLYVTRAQTKTERSAELRNK 325
Query: 292 FEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
F+ E++ Q NLYVKNL + +DDE+LR+ F FG ITS K
Sbjct: 326 FQAKNTEKVGN-QSCNLYVKNLPEDVDDEKLRQMFEQFGEITSPK 369
Score = 100 bits (249), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 72/216 (33%), Positives = 111/216 (51%), Gaps = 37/216 (17%)
Query: 112 NVFIKNLDKS-IDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEK 170
NV+IK+L +S + + F FG I S + D +G + + FV++E ++A K++E
Sbjct: 216 NVYIKHLPESWTTEEDVQKAFEEFGKITSVAIQTDRKG--RRFAFVNYEDFDSAAKAVEA 273
Query: 171 VNG--MLLNSKI---------------------VFVGKFIPRKEREKELGEK-------- 199
+NG M +I ++V + + ER EL K
Sbjct: 274 MNGKDMRTQEEIDAGKGEEESTEEGSDEMPEYKLYVTRAQTKTERSAELRNKFQAKNTEK 333
Query: 200 -AKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM--NNDGKSRGFGFVAYESPEFA 256
N+Y+KN ED +DEKL++MFE +G ITS +VM N G SRGFGFV + +
Sbjct: 334 VGNQSCNLYVKNLPEDVDDEKLRQMFEQFGEITSPKVMVDENTGVSRGFGFVCFANQADG 393
Query: 257 EKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRF 292
EKA+QA + K GK L+V A+K+ R + L++R+
Sbjct: 394 EKAIQAMHLKLYGGKPLFVAVAEKRDARIERLQQRY 429
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 117/230 (50%), Gaps = 25/230 (10%)
Query: 111 GNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSIE 169
++++ +L + +Y+ F+ G + S +V +D S GY +V+F A ++++
Sbjct: 34 ASLYVGDLKPDVTEAMLYEVFNGVGPVASIRVCRDSVTRRSLGYAYVNFHNVADAERALD 93
Query: 170 KVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGT 229
+N + K I R+ L + NV++KN + +++ L + F +G
Sbjct: 94 TLNYSPIRGKQC----RIMWSHRDPTLRKAGN--ANVFVKNLDKTIDNKALYDTFSLFGN 147
Query: 230 ITSYRV-MNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S +V ++DGKSRG+GFV +E+ E A KA+ NG + K +YVG QK AER ++
Sbjct: 148 ILSCKVATDDDGKSRGYGFVHFENDESAHKAITKLNGMMIGEKAVYVGPFQKHAERAEQH 207
Query: 289 ---KRRFEMLKIERLNRYQGVNLYVKNLDDS-IDDERLRKEFTPFGTITS 334
R+F N+Y+K+L +S +E ++K F FG ITS
Sbjct: 208 GDEPRKF-------------TNVYIKHLPESWTTEEDVQKAFEEFGKITS 244
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 61/136 (44%), Gaps = 18/136 (13%)
Query: 203 FTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND--GKSRGFGFVAYESPEFAEKAV 260
F ++Y+ + D + L E+F G + S RV + +S G+ +V + + AE+A+
Sbjct: 33 FASLYVGDLKPDVTEAMLYEVFNGVGPVASIRVCRDSVTRRSLGYAYVNFHNVADAERAL 92
Query: 261 QAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDE 320
N + GK + + + L + N++VKNLD +ID++
Sbjct: 93 DTLNYSPIRGKQCRIMWSHRDPT----------------LRKAGNANVFVKNLDKTIDNK 136
Query: 321 RLRKEFTPFGTITSAK 336
L F+ FG I S K
Sbjct: 137 ALYDTFSLFGNILSCK 152
>gi|47223169|emb|CAG11304.1| unnamed protein product [Tetraodon nigroviridis]
Length = 642
Score = 268 bits (684), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 133/197 (67%), Positives = 159/197 (80%), Gaps = 2/197 (1%)
Query: 141 KVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKA 200
+V DE+G SKGYGFVHFETEEAAN++IE +NGMLLN + VFVG F RKERE+ELG KA
Sbjct: 127 QVVCDERG-SKGYGFVHFETEEAANRAIETMNGMLLNDRKVFVGNFKSRKEREEELGSKA 185
Query: 201 KLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAEKA 259
FTNVYIKNFGED+ DEKLKE+F +G S RVM ++ G+SRGFGFV + A+KA
Sbjct: 186 LKFTNVYIKNFGEDYTDEKLKEVFSAFGRTLSVRVMKDERGRSRGFGFVNFAHHGDAQKA 245
Query: 260 VQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDD 319
V NG E++GK++YVGRAQK+ ER ELKR+FE++K +R+ RYQGVNLYVKNLDD IDD
Sbjct: 246 VDEMNGTELNGKVIYVGRAQKRLERQGELKRKFELIKQDRIQRYQGVNLYVKNLDDGIDD 305
Query: 320 ERLRKEFTPFGTITSAK 336
ERLRKEF P+GTITSAK
Sbjct: 306 ERLRKEFAPYGTITSAK 322
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 90/230 (39%), Positives = 136/230 (59%), Gaps = 16/230 (6%)
Query: 79 RALDTMNFDALKGRPIRI----MWSQRDPSLRKSGV--GNVFIKNLDKSIDNKAMYDTFS 132
RA++TMN L R + + +R+ L + NV+IKN + ++ + + FS
Sbjct: 151 RAIETMNGMLLNDRKVFVGNFKSRKEREEELGSKALKFTNVYIKNFGEDYTDEKLKEVFS 210
Query: 133 AFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKER 192
AFG LS +V +DE+G S+G+GFV+F A K+++++NG LN K+++VG+ R ER
Sbjct: 211 AFGRTLSVRVMKDERGRSRGFGFVNFAHHGDAQKAVDEMNGTELNGKVIYVGRAQKRLER 270
Query: 193 EKELGEKAKLF----------TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDGKS 242
+ EL K +L N+Y+KN + +DE+L++ F PYGTITS +VM + +S
Sbjct: 271 QGELKRKFELIKQDRIQRYQGVNLYVKNLDDGIDDERLRKEFAPYGTITSAKVMTDGPQS 330
Query: 243 RGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRF 292
RGFGFV + SPE A KAV NG+ V K LYV AQ++ ER L ++
Sbjct: 331 RGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRREERKAILTNKY 380
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 105/231 (45%), Gaps = 25/231 (10%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + +Y FS G I+S +V +D S GY +++F+ ++ +
Sbjct: 10 LASLYVGDLHPDVTEAMLYQKFSPAGPIMSIRVCRDIITRRSLGYAYINFQQPADGSEEV 69
Query: 169 EKVNGMLLNSKIVFVGKFIPR---KEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFE 225
+ V + R + RE + + ++ G D
Sbjct: 70 GRGKHFYQEHGRVHRQQGAVRHLLRIREHSVLQGKGQRCQGLCRDAGGDVT--------- 120
Query: 226 PYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERT 285
G ++V+ ++ S+G+GFV +E+ E A +A++ NG ++ + ++VG + + ER
Sbjct: 121 --GRTALFQVVCDERGSKGYGFVHFETEEAANRAIETMNGMLLNDRKVFVGNFKSRKERE 178
Query: 286 QELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+EL + LK N+Y+KN + DE+L++ F+ FG S +
Sbjct: 179 EELGSK--ALKF--------TNVYIKNFGEDYTDEKLKEVFSAFGRTLSVR 219
>gi|302811197|ref|XP_002987288.1| hypothetical protein SELMODRAFT_269256 [Selaginella moellendorffii]
gi|302815025|ref|XP_002989195.1| hypothetical protein SELMODRAFT_269487 [Selaginella moellendorffii]
gi|300143095|gb|EFJ09789.1| hypothetical protein SELMODRAFT_269487 [Selaginella moellendorffii]
gi|300144923|gb|EFJ11603.1| hypothetical protein SELMODRAFT_269256 [Selaginella moellendorffii]
Length = 567
Score = 266 bits (680), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 136/262 (51%), Positives = 183/262 (69%), Gaps = 6/262 (2%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D RA++ +NF + G+P+RIM+S RDPS+RKSG GN+F+KNLDKSIDNKA++D FS +G
Sbjct: 68 DASRAIEELNFMPVNGKPVRIMFSYRDPSIRKSGSGNLFVKNLDKSIDNKALHDLFSPYG 127
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
ILSCK+A D SKG+GFV F+TE+AA+ +IEK+NG L+ K +FVG F+ R+ER+
Sbjct: 128 KILSCKIALDVSNVSKGHGFVQFDTEDAAHTAIEKINGTTLHDKQLFVGPFVRRQERDP- 186
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGKSRGFGFVAYESPE 254
A F NV++KN E DE L+++F +G I+S VM DGKS+ FGFV +E+PE
Sbjct: 187 ---PASKFNNVFVKNLSEITTDEDLQKLFGVFGPISSAVVMKEVDGKSKCFGFVNFENPE 243
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A KAV+ +G K LYV RAQKK ER ELK +FE + + ++ NLY+KNLD
Sbjct: 244 DAVKAVEDLHGTTFQDKELYVSRAQKKNEREAELKAKFEHERKDTEDK-SPTNLYLKNLD 302
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
D IDDE+L+ F+ FG +TS K
Sbjct: 303 DGIDDEKLKDMFSAFGNVTSCK 324
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 80/203 (39%), Positives = 116/203 (57%), Gaps = 12/203 (5%)
Query: 100 QRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFE 159
+RDP K NVF+KNL + ++ + F FG I S V ++ G SK +GFV+FE
Sbjct: 183 ERDPPASK--FNNVFVKNLSEITTDEDLQKLFGVFGPISSAVVMKEVDGKSKCFGFVNFE 240
Query: 160 TEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEK---------AKLFTNVYIKN 210
E A K++E ++G K ++V + + ERE EL K K TN+Y+KN
Sbjct: 241 NPEDAVKAVEDLHGTTFQDKELYVSRAQKKNEREAELKAKFEHERKDTEDKSPTNLYLKN 300
Query: 211 FGEDFNDEKLKEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVD 269
+ +DEKLK+MF +G +TS +VM + G S+G GFVA+ + + A +AV NGK +
Sbjct: 301 LDDGIDDEKLKDMFSAFGNVTSCKVMRDPLGHSKGSGFVAFSTSDAALRAVAQMNGKMIG 360
Query: 270 GKILYVGRAQKKAERTQELKRRF 292
K LYV AQKK ER +L+ +F
Sbjct: 361 SKPLYVAMAQKKEERKAKLEAQF 383
Score = 100 bits (249), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 124/241 (51%), Gaps = 22/241 (9%)
Query: 97 MWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGF 155
M + P +++ +LD S++ ++D F G+++S ++ +D S GY +
Sbjct: 1 MAQETSPPRSPFASTALYVGDLDPSVNEAQIFDIFKQIGNVMSVRLCRDMVTKRSLGYAY 60
Query: 156 VHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDF 215
V++ + A+++IE++N M +N K V + F R ++ G N+++KN +
Sbjct: 61 VNYNNTQDASRAIEELNFMPVNGKPVRI-MFSYRDPSIRKSGS-----GNLFVKNLDKSI 114
Query: 216 NDEKLKEMFEPYGTITSYRV-MNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILY 274
+++ L ++F PYG I S ++ ++ S+G GFV +++ + A A++ NG + K L+
Sbjct: 115 DNKALHDLFSPYGKILSCKIALDVSNVSKGHGFVQFDTEDAAHTAIEKINGTTLHDKQLF 174
Query: 275 VGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITS 334
VG ++ ER + N N++VKNL + DE L+K F FG I+S
Sbjct: 175 VGPFVRRQERDP---------PASKFN-----NVFVKNLSEITTDEDLQKLFGVFGPISS 220
Query: 335 A 335
A
Sbjct: 221 A 221
>gi|323448247|gb|EGB04148.1| hypothetical protein AURANDRAFT_70409 [Aureococcus anophagefferens]
Length = 616
Score = 263 bits (673), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 142/272 (52%), Positives = 191/272 (70%), Gaps = 26/272 (9%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D ERALDTMN+ +K +P RIMWSQRDP+LRKSGVGNVF+KNLD SID+KA++DTFS FG
Sbjct: 66 DAERALDTMNYTLIKSKPCRIMWSQRDPTLRKSGVGNVFVKNLDSSIDHKALFDTFSLFG 125
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCKVA DE G S+GYG+VH+E+E+AA +I K+N M + K V+VG F+ R ER +
Sbjct: 126 NILSCKVATDEAGRSQGYGYVHYESEDAATDAINKINSMTICDKEVYVGHFVRRTERSGQ 185
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEF 255
+TN+Y+KNF D+++ L++ FE + DG + FG+V +E +
Sbjct: 186 -----SDWTNLYVKNFPADWDEATLRKAFEMFAAA--------DGSA--FGWVNFEGHDA 230
Query: 256 AEKAVQAWNG-KEVDGKI----------LYVGRAQKKAERTQELKRRFEMLKIERLNRYQ 304
A A+ A NG E+ G L+VGRAQKK ER +ELK +F+ KIER+ +YQ
Sbjct: 231 AVAAMDALNGASELPGHAGTAPITLKSPLFVGRAQKKVERERELKAKFDAAKIERIKKYQ 290
Query: 305 GVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
GVNL+VKNLDD++DD++LR+ FT +GTITSA+
Sbjct: 291 GVNLFVKNLDDALDDDQLREHFTEYGTITSAR 322
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/202 (34%), Positives = 103/202 (50%), Gaps = 36/202 (17%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
N+++KN D + F F + + +G+V+FE +AA +++ +
Sbjct: 190 NLYVKNFPADWDEATLRKAFEMFAA-----------ADGSAFGWVNFEGHDAAVAAMDAL 238
Query: 172 NG------------MLLNSKIVFVGKFIPRKEREKELGEK---AKL-------FTNVYIK 209
NG + L S + FVG+ + ERE+EL K AK+ N+++K
Sbjct: 239 NGASELPGHAGTAPITLKSPL-FVGRAQKKVERERELKAKFDAAKIERIKKYQGVNLFVK 297
Query: 210 NFGEDFNDEKLKEMFEPYGTITSYRVMNND--GKSRGFGFVAYESPEFAEKAVQAWNGKE 267
N + +D++L+E F YGTITS RVM G SRGFGFV + SPE A KAV N K
Sbjct: 298 NLDDALDDDQLREHFTEYGTITSARVMREPATGTSRGFGFVCFSSPEEAAKAVTEMNNKL 357
Query: 268 VDGKILYVGRAQKKAERTQELK 289
V GK ++V AQ+K R +L+
Sbjct: 358 VLGKPIFVALAQRKEVRRAQLE 379
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 103/223 (46%), Gaps = 23/223 (10%)
Query: 111 GNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSIE 169
++++ +L +++ F+ G + S +V +D S GY +V+F A ++++
Sbjct: 13 ASLYVGDLATDASEGLLFEIFNTVGPVASIRVCRDAVTRRSLGYAYVNFHNVSDAERALD 72
Query: 170 KVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGT 229
+N L+ SK I +R+ L + NV++KN + + L + F +G
Sbjct: 73 TMNYTLIKSKPC----RIMWSQRDPTLRKSG--VGNVFVKNLDSSIDHKALFDTFSLFGN 126
Query: 230 ITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S +V ++ G+S+G+G+V YES + A A+ N + K +YVG ++ ER+
Sbjct: 127 ILSCKVATDEAGRSQGYGYVHYESEDAATDAINKINSMTICDKEVYVGHFVRRTERS--- 183
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGT 331
+ NLYVKN D+ LRK F F
Sbjct: 184 ------------GQSDWTNLYVKNFPADWDEATLRKAFEMFAA 214
>gi|84998214|ref|XP_953828.1| polyadenylate (poly(A)) binding protein [Theileria annulata]
gi|65304825|emb|CAI73150.1| polyadenylate (poly(A)) binding protein, putative [Theileria
annulata]
Length = 664
Score = 262 bits (670), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 134/263 (50%), Positives = 180/263 (68%), Gaps = 8/263 (3%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D E AL+++N+ +KG P RIMWS RDPSLR+SG GN+F+KNLDKSID K++YDTFS FG
Sbjct: 80 DAEAALESLNYIEIKGHPTRIMWSNRDPSLRRSGAGNIFVKNLDKSIDTKSLYDTFSHFG 139
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
ILSCKVA D G SK YGFVH+E EE+A ++IEKVNGML+ K V V F+ +++RE E
Sbjct: 140 PILSCKVAVDASGASKRYGFVHYENEESAREAIEKVNGMLIGGKRVEVAPFLRKQDREGE 199
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEF 255
++FTN+Y++NF D+N+E L++ E YG ITS ++ D K R F FV Y+ PE
Sbjct: 200 -----EVFTNLYVRNFPADWNEEALRQFLEKYGEITSM-MLKEDSKGRRFAFVNYKEPEV 253
Query: 256 AEKAVQAWNGKEVD--GKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNL 313
A++ V N ++D + L V Q KA+R L+ +F + + ++ NLY+KNL
Sbjct: 254 AKEVVNTLNDLKLDESSEPLLVCPHQDKAKRQNLLRAQFNNSSMGQEDKRVTSNLYIKNL 313
Query: 314 DDSIDDERLRKEFTPFGTITSAK 336
DDS DDE L + F PFGTITS+K
Sbjct: 314 DDSFDDESLGELFKPFGTITSSK 336
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 105/183 (57%), Gaps = 15/183 (8%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
N++++N + +A+ +G I S + +D +G + + FV+++ E A + + +
Sbjct: 204 NLYVRNFPADWNEEALRQFLEKYGEITSMMLKEDSKG--RRFAFVNYKEPEVAKEVVNTL 261
Query: 172 NGMLLN--SKIVFVGKFIPRKEREKEL----------GEKAKLFTNVYIKNFGEDFNDEK 219
N + L+ S+ + V + +R+ L E ++ +N+YIKN + F+DE
Sbjct: 262 NDLKLDESSEPLLVCPHQDKAKRQNLLRAQFNNSSMGQEDKRVTSNLYIKNLDDSFDDES 321
Query: 220 LKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRA 278
L E+F+P+GTITS +VM + + SRGFGFV + +P+ A KA+ A + K V GK LYVG A
Sbjct: 322 LGELFKPFGTITSSKVMLDANNHSRGFGFVCFTNPQEATKAIAAMHLKLVKGKPLYVGLA 381
Query: 279 QKK 281
+K+
Sbjct: 382 EKR 384
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 48/78 (61%)
Query: 107 KSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANK 166
K N++IKNLD S D++++ + F FG+I S KV D +S+G+GFV F + A K
Sbjct: 302 KRVTSNLYIKNLDDSFDDESLGELFKPFGTITSSKVMLDANNHSRGFGFVCFTNPQEATK 361
Query: 167 SIEKVNGMLLNSKIVFVG 184
+I ++ L+ K ++VG
Sbjct: 362 AIAAMHLKLVKGKPLYVG 379
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 63/138 (45%), Gaps = 24/138 (17%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND--GKSRGFGFVAYESPEFAEKAVQ 261
++Y+ + D + L E+F G + S RV + KS G+ +V Y S + AE A++
Sbjct: 27 ASLYVGDLKPDVTEAVLYEVFNTVGPVASIRVCRDSVTRKSLGYAYVNYYSTQDAEAALE 86
Query: 262 AWNGKEVDG---KILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSID 318
+ N E+ G +I++ R L R N++VKNLD SID
Sbjct: 87 SLNYIEIKGHPTRIMWSNRDPS-------------------LRRSGAGNIFVKNLDKSID 127
Query: 319 DERLRKEFTPFGTITSAK 336
+ L F+ FG I S K
Sbjct: 128 TKSLYDTFSHFGPILSCK 145
>gi|255556766|ref|XP_002519416.1| polyadenylate-binding protein, putative [Ricinus communis]
gi|223541279|gb|EEF42830.1| polyadenylate-binding protein, putative [Ricinus communis]
Length = 632
Score = 261 bits (666), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 125/262 (47%), Positives = 184/262 (70%), Gaps = 3/262 (1%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D RA++T N L G+ +R+MWS RDP R++G+GNV++KNL +SIDN + + F FG
Sbjct: 66 DAIRAIETKNHTPLNGKLMRVMWSHRDPDARRNGIGNVYVKNLSESIDNVGLQELFGEFG 125
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
++LSCKVA E G SKG+GFV FE+E++AN +IEK+NG ++ K ++VGKF+ K+ ++
Sbjct: 126 TVLSCKVATFEDGKSKGHGFVQFESEDSANSAIEKLNGSIVGDKQIYVGKFV--KKSDRV 183
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPE 254
L +TN+Y+KN +E L+E F +G I S + ++ G SRGFGFV +E+P+
Sbjct: 184 LPSPDAKYTNLYVKNLDPGITEELLQEKFSEFGKIVSVAIARDECGSSRGFGFVNFENPD 243
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A A++ NG E+ K+LYVGRAQK+AER Q L+R+FE + E++ +++G N+YVKN+D
Sbjct: 244 DARWAMERMNGTELGSKVLYVGRAQKRAEREQILRRQFEEKRKEQITKFKGSNVYVKNID 303
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
D + DE LR+ F+ GTITSAK
Sbjct: 304 DDVTDEELREHFSQCGTITSAK 325
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 80/184 (43%), Positives = 118/184 (64%), Gaps = 11/184 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
N+++KNLD I + + + FS FG I+S +A+DE G+S+G+GFV+FE + A ++E++
Sbjct: 193 NLYVKNLDPGITEELLQEKFSEFGKIVSVAIARDECGSSRGFGFVNFENPDDARWAMERM 252
Query: 172 NGMLLNSKIVFVGKFIPRKEREKEL--------GEKAKLF--TNVYIKNFGEDFNDEKLK 221
NG L SK+++VG+ R ERE+ L E+ F +NVY+KN +D DE+L+
Sbjct: 253 NGTELGSKVLYVGRAQKRAEREQILRRQFEEKRKEQITKFKGSNVYVKNIDDDVTDEELR 312
Query: 222 EMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
E F GTITS ++M +D G+S+GFGFV + S E A KAV ++G K LYV AQ+
Sbjct: 313 EHFSQCGTITSAKLMKDDKGRSKGFGFVCFSSSEEASKAVNTFHGYMFHRKPLYVAIAQR 372
Query: 281 KAER 284
K ER
Sbjct: 373 KEER 376
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 75/233 (32%), Positives = 122/233 (52%), Gaps = 20/233 (8%)
Query: 104 SLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQ-GNSKGYGFVHFETEE 162
++ + ++++ L + + + D FS F ++ S +V +D G S YG+V+F + E
Sbjct: 6 TISATATASLYVGELHCDVSDGQLVDAFSEFNTLASVRVCRDSSTGRSLCYGYVNFISPE 65
Query: 163 AANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKE 222
A ++IE N LN K++ V ++ + NVY+KN E ++ L+E
Sbjct: 66 DAIRAIETKNHTPLNGKLMRV------MWSHRDPDARRNGIGNVYVKNLSESIDNVGLQE 119
Query: 223 MFEPYGTITSYRVMN-NDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKK 281
+F +GT+ S +V DGKS+G GFV +ES + A A++ NG V K +YVG+ KK
Sbjct: 120 LFGEFGTVLSCKVATFEDGKSKGHGFVQFESEDSANSAIEKLNGSIVGDKQIYVGKFVKK 179
Query: 282 AERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITS 334
++R +Y NLYVKNLD I +E L+++F+ FG I S
Sbjct: 180 SDRVLPSPDA----------KY--TNLYVKNLDPGITEELLQEKFSEFGKIVS 220
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 71/140 (50%), Gaps = 20/140 (14%)
Query: 200 AKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND--GKSRGFGFVAYESPEFAE 257
A ++Y+ D +D +L + F + T+ S RV + G+S +G+V + SPE A
Sbjct: 9 ATATASLYVGELHCDVSDGQLVDAFSEFNTLASVRVCRDSSTGRSLCYGYVNFISPEDAI 68
Query: 258 KAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGV-NLYVKNLDDS 316
+A++ N ++GK++ V + + + R G+ N+YVKNL +S
Sbjct: 69 RAIETKNHTPLNGKLMRVMWSHRDPDA-----------------RRNGIGNVYVKNLSES 111
Query: 317 IDDERLRKEFTPFGTITSAK 336
ID+ L++ F FGT+ S K
Sbjct: 112 IDNVGLQELFGEFGTVLSCK 131
>gi|71033649|ref|XP_766466.1| polyadenylate binding protein [Theileria parva strain Muguga]
gi|68353423|gb|EAN34183.1| polyadenylate binding protein, putative [Theileria parva]
Length = 661
Score = 258 bits (660), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 131/263 (49%), Positives = 179/263 (68%), Gaps = 8/263 (3%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D + AL+ +N+ +KG P RIMWS RDPSLR+SG GN+F+KNLDKSID K++YDTFS FG
Sbjct: 80 DAQEALENLNYIEIKGHPTRIMWSNRDPSLRRSGAGNIFVKNLDKSIDTKSLYDTFSHFG 139
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
ILSCKVA D G SK YGFVH+E EE+A ++IEKVNGML+ K V V F+ +++RE E
Sbjct: 140 PILSCKVAVDASGASKRYGFVHYENEESAREAIEKVNGMLIGGKRVEVAPFLRKQDRESE 199
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEF 255
++FTN+Y++NF D+++E L++ E YG ITS ++ D K R F FV Y+ PE
Sbjct: 200 -----EVFTNLYVRNFPADWDEEALRQFLEKYGEITSM-MLKEDSKGRRFAFVNYKEPEV 253
Query: 256 AEKAVQAWNGKEVD--GKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNL 313
A++ V N +++ + L V Q KA+R L+ +F + + ++ NLY+KNL
Sbjct: 254 AKEVVNTLNDLKLEESSEPLLVCPHQDKAKRQNLLRAQFNNSTMAQEDKRVTSNLYIKNL 313
Query: 314 DDSIDDERLRKEFTPFGTITSAK 336
DDS DDE L + F PFGTITS+K
Sbjct: 314 DDSFDDESLGELFKPFGTITSSK 336
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 105/183 (57%), Gaps = 15/183 (8%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
N++++N D +A+ +G I S + +D +G + + FV+++ E A + + +
Sbjct: 204 NLYVRNFPADWDEEALRQFLEKYGEITSMMLKEDSKG--RRFAFVNYKEPEVAKEVVNTL 261
Query: 172 NGMLL--NSKIVFVGKFIPRKEREKEL----------GEKAKLFTNVYIKNFGEDFNDEK 219
N + L +S+ + V + +R+ L E ++ +N+YIKN + F+DE
Sbjct: 262 NDLKLEESSEPLLVCPHQDKAKRQNLLRAQFNNSTMAQEDKRVTSNLYIKNLDDSFDDES 321
Query: 220 LKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRA 278
L E+F+P+GTITS +VM + + SRGFGFV + +P+ A KA+ A + K V GK LYVG A
Sbjct: 322 LGELFKPFGTITSSKVMLDANNHSRGFGFVCFTNPQEATKAIAAMHLKLVKGKPLYVGLA 381
Query: 279 QKK 281
+K+
Sbjct: 382 EKR 384
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 48/78 (61%)
Query: 107 KSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANK 166
K N++IKNLD S D++++ + F FG+I S KV D +S+G+GFV F + A K
Sbjct: 302 KRVTSNLYIKNLDDSFDDESLGELFKPFGTITSSKVMLDANNHSRGFGFVCFTNPQEATK 361
Query: 167 SIEKVNGMLLNSKIVFVG 184
+I ++ L+ K ++VG
Sbjct: 362 AIAAMHLKLVKGKPLYVG 379
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 63/138 (45%), Gaps = 24/138 (17%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND--GKSRGFGFVAYESPEFAEKAVQ 261
++Y+ + D + L E+F G + S RV + KS G+ +V Y S + A++A++
Sbjct: 27 ASLYVGDLKPDVTEAVLYEVFNTVGPVASIRVCRDSVTRKSLGYAYVNYYSTQDAQEALE 86
Query: 262 AWNGKEVDG---KILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSID 318
N E+ G +I++ R L R N++VKNLD SID
Sbjct: 87 NLNYIEIKGHPTRIMWSNRDPS-------------------LRRSGAGNIFVKNLDKSID 127
Query: 319 DERLRKEFTPFGTITSAK 336
+ L F+ FG I S K
Sbjct: 128 TKSLYDTFSHFGPILSCK 145
>gi|451798952|gb|AGF69179.1| polyadenylate-binding protein 2-like protein, partial [Triticum
aestivum]
Length = 497
Score = 258 bits (660), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 132/237 (55%), Positives = 175/237 (73%), Gaps = 3/237 (1%)
Query: 101 RDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFET 160
RDPS R+SG N+FIKNLDK+IDNK ++DTFSAFG+ILSCKVA D+ G SKG+GFV +E
Sbjct: 1 RDPSSRRSGSANIFIKNLDKTIDNKTLHDTFSAFGAILSCKVAMDDIGQSKGFGFVQYEK 60
Query: 161 EEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKL 220
EE+A +++ +NGML+N K V+VG F+ ++ER+ +KAK F NV++KN E + L
Sbjct: 61 EESAQSAMKSLNGMLINDKPVYVGPFLRKQERDNSF-DKAK-FNNVFVKNLSESTTKDDL 118
Query: 221 KEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQ 279
++F YGTITS VM DGKSR F FV +ESP+ A +AV+ NGK+++ K YVGRAQ
Sbjct: 119 VKVFSGYGTITSAVVMIGMDGKSRCFDFVNFESPDDAARAVEELNGKKINDKEWYVGRAQ 178
Query: 280 KKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
KK+ER +LKRRFE + ++YQG NLY+KNLDD I D++LR+ F+ FG ITS K
Sbjct: 179 KKSEREMDLKRRFEQSMKDAADKYQGQNLYLKNLDDGITDDQLRELFSNFGKITSCK 235
Score = 124 bits (311), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 74/235 (31%), Positives = 131/235 (55%), Gaps = 15/235 (6%)
Query: 77 TERALDTMNFDALKGRPIRI----MWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFS 132
+ A+ ++N + +P+ + +RD S K+ NVF+KNL +S + FS
Sbjct: 64 AQSAMKSLNGMLINDKPVYVGPFLRKQERDNSFDKAKFNNVFVKNLSESTTKDDLVKVFS 123
Query: 133 AFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKER 192
+G+I S V G S+ + FV+FE+ + A +++E++NG +N K +VG+ + ER
Sbjct: 124 GYGTITSAVVMIGMDGKSRCFDFVNFESPDDAARAVEELNGKKINDKEWYVGRAQKKSER 183
Query: 193 EKELGEKAKLFT----------NVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGK 241
E +L + + N+Y+KN + D++L+E+F +G ITS ++M + +G
Sbjct: 184 EMDLKRRFEQSMKDAADKYQGQNLYLKNLDDGITDDQLRELFSNFGKITSCKIMRDQNGV 243
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLK 296
S+G GFV++ + E A +A+ NGK + GK LYV AQ+K +R L+ +F ++
Sbjct: 244 SKGSGFVSFSTREEASQALTEMNGKMISGKPLYVAFAQRKEDRKAMLQAQFSQMR 298
>gi|357510891|ref|XP_003625734.1| Polyadenylate binding protein [Medicago truncatula]
gi|355500749|gb|AES81952.1| Polyadenylate binding protein [Medicago truncatula]
Length = 613
Score = 258 bits (659), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 136/285 (47%), Positives = 190/285 (66%), Gaps = 9/285 (3%)
Query: 57 CHQLGSGAIL----VQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGN 112
C SG L V P+ D RA++ N L G+ IR+MWS+RDP RKS +GN
Sbjct: 42 CRDSSSGKSLCYGYVNFLSPH--DAIRAIEVKNHSTLNGKAIRVMWSRRDPDARKSCIGN 99
Query: 113 VFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVN 172
VF+KNL +SIDN + D F FG+ILS KV E G SKGYGFV FETEE+AN +IE++N
Sbjct: 100 VFVKNLAESIDNSGLEDMFKKFGNILSSKVVMSEDGKSKGYGFVQFETEESANAAIERLN 159
Query: 173 GMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITS 232
G L+ K ++VGKF+ + +R G + +TN+Y+KN D ++ L+E F +G I S
Sbjct: 160 GYLVGDKQIYVGKFVKKSDRISS-GPDTR-YTNLYMKNLDLDISETLLREKFSSFGKIIS 217
Query: 233 YRVM-NNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRR 291
V +++G S+GFGFV +++PE A++A++ NG ++ KILYV RAQKKAER Q L ++
Sbjct: 218 LAVAKDSNGMSKGFGFVNFDNPEDAKRAMETMNGLQLGSKILYVARAQKKAEREQILHQQ 277
Query: 292 FEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
FE + E++ +Y+G N+YVKN+DD++ DE LR F+ GTITSAK
Sbjct: 278 FEEKRKEQVLKYKGSNIYVKNIDDNVSDEGLRDHFSVCGTITSAK 322
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 76/184 (41%), Positives = 119/184 (64%), Gaps = 11/184 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
N+++KNLD I + + FS+FG I+S VA+D G SKG+GFV+F+ E A +++E +
Sbjct: 190 NLYMKNLDLDISETLLREKFSSFGKIISLAVAKDSNGMSKGFGFVNFDNPEDAKRAMETM 249
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGE------KAKLF----TNVYIKNFGEDFNDEKLK 221
NG+ L SKI++V + + ERE+ L + K ++ +N+Y+KN ++ +DE L+
Sbjct: 250 NGLQLGSKILYVARAQKKAEREQILHQQFEEKRKEQVLKYKGSNIYVKNIDDNVSDEGLR 309
Query: 222 EMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
+ F GTITS ++M +D G S+GFGFV + +PE A KAV +++G GK LYV AQ+
Sbjct: 310 DHFSVCGTITSAKIMRDDKGISKGFGFVCFSTPEEANKAVNSFHGFMFHGKPLYVSLAQR 369
Query: 281 KAER 284
K +R
Sbjct: 370 KEDR 373
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 74/226 (32%), Positives = 123/226 (54%), Gaps = 20/226 (8%)
Query: 111 GNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQ-GNSKGYGFVHFETEEAANKSIE 169
++++ +L + + ++D FS F ++ S ++ +D G S YG+V+F + A ++IE
Sbjct: 10 ASLYVGDLHPDLSDSQLHDAFSDFKTLASVRICRDSSSGKSLCYGYVNFLSPHDAIRAIE 69
Query: 170 KVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGT 229
N LN K + V R++ + + NV++KN E ++ L++MF+ +G
Sbjct: 70 VKNHSTLNGKAIRV--MWSRRDPD----ARKSCIGNVFVKNLAESIDNSGLEDMFKKFGN 123
Query: 230 ITSYR-VMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S + VM+ DGKS+G+GFV +E+ E A A++ NG V K +YVG+ KK++R
Sbjct: 124 ILSSKVVMSEDGKSKGYGFVQFETEESANAAIERLNGYLVGDKQIYVGKFVKKSDRISSG 183
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITS 334
RY NLY+KNLD I + LR++F+ FG I S
Sbjct: 184 PD----------TRY--TNLYMKNLDLDISETLLREKFSSFGKIIS 217
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 71/132 (53%), Gaps = 17/132 (12%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQ----------------RDPSLRKSGVGNVFIKNLD 119
D +RA++TMN L + + + +Q R + K N+++KN+D
Sbjct: 241 DAKRAMETMNGLQLGSKILYVARAQKKAEREQILHQQFEEKRKEQVLKYKGSNIYVKNID 300
Query: 120 KSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSK 179
++ ++ + D FS G+I S K+ +D++G SKG+GFV F T E ANK++ +G + + K
Sbjct: 301 DNVSDEGLRDHFSVCGTITSAKIMRDDKGISKGFGFVCFSTPEEANKAVNSFHGFMFHGK 360
Query: 180 IVFVGKFIPRKE 191
++V RKE
Sbjct: 361 PLYV-SLAQRKE 371
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 67/135 (49%), Gaps = 18/135 (13%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM--NNDGKSRGFGFVAYESPEFAEKAVQ 261
++Y+ + D +D +L + F + T+ S R+ ++ GKS +G+V + SP A +A++
Sbjct: 10 ASLYVGDLHPDLSDSQLHDAFSDFKTLASVRICRDSSSGKSLCYGYVNFLSPHDAIRAIE 69
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDER 321
N ++GK + V +++ + + N++VKNL +SID+
Sbjct: 70 VKNHSTLNGKAIRVMWSRRDPDARKSCIG----------------NVFVKNLAESIDNSG 113
Query: 322 LRKEFTPFGTITSAK 336
L F FG I S+K
Sbjct: 114 LEDMFKKFGNILSSK 128
>gi|399217460|emb|CCF74347.1| unnamed protein product [Babesia microti strain RI]
Length = 679
Score = 256 bits (653), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 135/284 (47%), Positives = 178/284 (62%), Gaps = 27/284 (9%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D RAL+ + ++ + G+ +RIMWS RDPSLRKSG GNVFIKN+D+SID KA+YD FS +G
Sbjct: 94 DARRALEALKYNEICGKQVRIMWSHRDPSLRKSGAGNVFIKNIDESIDTKALYDAFSPYG 153
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKER--- 192
ILSCKVA DE G S+GYGFVHF+TE A ++I NGM L +K +FV F+ R ER
Sbjct: 154 QILSCKVATDETGRSRGYGFVHFDTEANATRAISDANGMQLGNKKIFVAPFVRRSERVSS 213
Query: 193 ---EKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDGKSRGFGFVA 249
E + EK FTN+Y++NF E++N+E LKE F P+G ITS +M +D R F F+
Sbjct: 214 TKLEDGVDEK---FTNLYVRNFPENWNEEILKENFSPFGEITSM-MMKSDPLGRKFAFIN 269
Query: 250 YESPEFAEKAVQAWNGKEVDGKI-----------------LYVGRAQKKAERTQELKRRF 292
Y A+ A++ NGK+ K L V Q +A R LK ++
Sbjct: 270 YAENSMAKAAIETMNGKDFSIKSGDKSTIEGEDTDKSETKLLVCAHQDRARRHAMLKAKY 329
Query: 293 EMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ + E ++YQGVNLY+KNLDDSI+D LR+ F FG ITS K
Sbjct: 330 DSMHAENKSKYQGVNLYIKNLDDSINDAELRELFEGFGLITSCK 373
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 101/211 (47%), Gaps = 30/211 (14%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
N++++N ++ + + + + FS FG I S + D G + + F+++ A +IE +
Sbjct: 226 NLYVRNFPENWNEEILKENFSPFGEITSMMMKSDPLG--RKFAFINYAENSMAKAAIETM 283
Query: 172 NGMLLNSKI-----------------VFVGKFIPRKEREKELGEKAKLF----------T 204
NG + K + V R R L K
Sbjct: 284 NGKDFSIKSGDKSTIEGEDTDKSETKLLVCAHQDRARRHAMLKAKYDSMHAENKSKYQGV 343
Query: 205 NVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPEFAEKAVQAW 263
N+YIKN + ND +L+E+FE +G ITS +VM + G S GFGFV + SPE A AV
Sbjct: 344 NLYIKNLDDSINDAELRELFEGFGLITSCKVMVDEHGASLGFGFVCFVSPEDATHAVSEM 403
Query: 264 NGKEVDGKILYVGRAQKKAERTQELKRRFEM 294
+ K V K LYVG A+K+ +R L+ R+++
Sbjct: 404 HLKLVHNKPLYVGLAEKREQRLNRLQMRYKV 434
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 58/94 (61%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
N++IKNLD SI++ + + F FG I SCKV DE G S G+GFV F + E A ++ ++
Sbjct: 344 NLYIKNLDDSINDAELRELFEGFGLITSCKVMVDEHGASLGFGFVCFVSPEDATHAVSEM 403
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTN 205
+ L+++K ++VG R++R L + K+ N
Sbjct: 404 HLKLVHNKPLYVGLAEKREQRLNRLQMRYKVGHN 437
>gi|62751624|ref|NP_001015753.1| poly(A) binding protein, cytoplasmic 4 (inducible form) [Xenopus
(Silurana) tropicalis]
gi|58476781|gb|AAH89689.1| poly(A) binding protein, cytoplasmic 4 (inducible form) [Xenopus
(Silurana) tropicalis]
Length = 217
Score = 254 bits (649), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 124/167 (74%), Positives = 139/167 (83%), Gaps = 3/167 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD +KG+PIRIMWSQRDPSLRKSGVGNVFIKNLDKSI
Sbjct: 53 GYAYVNFQQP--ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFSAFG+ILSCKV DE G SKGY FVHFET++AA+++IEK+NGMLLN + VF
Sbjct: 111 DNKALYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQDAADRAIEKMNGMLLNDRKVF 169
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGT 229
VG+F R+ERE ELG KAK FTNVYIKNFGED +DE+LKE F YG
Sbjct: 170 VGRFKCRREREAELGAKAKEFTNVYIKNFGEDMDDERLKETFSKYGC 216
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 122/223 (54%), Gaps = 17/223 (7%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + +Y+ FS G +LS +V +D S GY +V+F+ A +++
Sbjct: 10 MASLYVGDLHPDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERAL 69
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N ++ K + I +R+ L + NV+IKN + +++ L + F +G
Sbjct: 70 DTMNFDVIKGKPIR----IMWSQRDPSLRKSG--VGNVFIKNLDKSIDNKALYDTFSAFG 123
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S +V+ ++ S+G+ FV +E+ + A++A++ NG ++ + ++VGR + + ER EL
Sbjct: 124 NILSCKVVCDENGSKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKCRREREAEL 183
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGT 331
+ + + N+Y+KN + +DDERL++ F+ +G
Sbjct: 184 GAKAK----------EFTNVYIKNFGEDMDDERLKETFSKYGC 216
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 64/136 (47%), Gaps = 20/136 (14%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQ 261
++Y+ + D + L E F P G + S RV + +S G+ +V ++ P AE+A+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGV-NLYVKNLDDSIDDE 320
N + GK + + +Q+ R GV N+++KNLD SID++
Sbjct: 71 TMNFDVIKGKPIRIMWSQRDPSL-----------------RKSGVGNVFIKNLDKSIDNK 113
Query: 321 RLRKEFTPFGTITSAK 336
L F+ FG I S K
Sbjct: 114 ALYDTFSAFGNILSCK 129
>gi|395506976|ref|XP_003757804.1| PREDICTED: polyadenylate-binding protein 1-like [Sarcophilus
harrisii]
Length = 594
Score = 254 bits (648), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 125/200 (62%), Positives = 157/200 (78%), Gaps = 4/200 (2%)
Query: 140 CKVA--QDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELG 197
C+VA DE G S+G+GFVHFET+EAAN++I +NGMLLN + VFVG F R+ERE ELG
Sbjct: 111 CRVAVVCDENG-SRGFGFVHFETQEAANQAISTMNGMLLNDRKVFVGHFKSRQEREAELG 169
Query: 198 EKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPEFA 256
+A FTN+Y+KNF ED +D+ L+E+F +G S +VM + +G SRGFGFV +E E A
Sbjct: 170 ARALEFTNIYVKNFEEDVDDQCLEELFSEFGKTLSVKVMVDENGHSRGFGFVNFEKHEEA 229
Query: 257 EKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDS 316
+KAV + NGK + G++LYVGRAQK+ ER ELKRRFE +K ER+NRYQGVNLYVKNLDD
Sbjct: 230 QKAVNSMNGKALGGRVLYVGRAQKRTERQGELKRRFEQMKQERVNRYQGVNLYVKNLDDV 289
Query: 317 IDDERLRKEFTPFGTITSAK 336
IDDE+LRKEF+P+G ITSAK
Sbjct: 290 IDDEKLRKEFSPYGVITSAK 309
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 83/204 (40%), Positives = 122/204 (59%), Gaps = 11/204 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
N+++KN ++ +D++ + + FS FG LS KV DE G+S+G+GFV+FE E A K++ +
Sbjct: 177 NIYVKNFEEDVDDQCLEELFSEFGKTLSVKVMVDENGHSRGFGFVNFEKHEEAQKAVNSM 236
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKLK 221
NG L ++++VG+ R ER+ EL + + N+Y+KN + +DEKL+
Sbjct: 237 NGKALGGRVLYVGRAQKRTERQGELKRRFEQMKQERVNRYQGVNLYVKNLDDVIDDEKLR 296
Query: 222 EMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKK 281
+ F PYG ITS +VM G S+GFGFV + SPE A KAV NG+ V K LYV AQ+K
Sbjct: 297 KEFSPYGVITSAKVMTEGGHSKGFGFVCFSSPEEATKAVTEMNGRIVSTKPLYVALAQRK 356
Query: 282 AERTQELKRRFEMLKIERLNRYQG 305
ER L ++ M +I L G
Sbjct: 357 EERKAILTNQY-MQRISVLRNING 379
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 58/108 (53%), Gaps = 10/108 (9%)
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
T+ V+ ++ SRGFGFV +E+ E A +A+ NG ++ + ++VG + + ER EL
Sbjct: 109 TLCRVAVVCDENGSRGFGFVHFETQEAANQAISTMNGMLLNDRKVFVGHFKSRQEREAEL 168
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
R + N+YVKN ++ +DD+ L + F+ FG S K
Sbjct: 169 GAR----------ALEFTNIYVKNFEEDVDDQCLEELFSEFGKTLSVK 206
>gi|296424904|ref|XP_002841985.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295638239|emb|CAZ86176.1| unnamed protein product [Tuber melanosporum]
Length = 374
Score = 253 bits (647), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 124/223 (55%), Positives = 158/223 (70%), Gaps = 2/223 (0%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D ERAL+ +N+ +KGRP RIMWSQRDP+LRK+G GNVFIKNLD +IDNKA++DTF+AFG
Sbjct: 106 DGERALEELNYTLIKGRPCRIMWSQRDPALRKTGQGNVFIKNLDTAIDNKALHDTFAAFG 165
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCKVAQDE NS+GYGFVH+ET EAAN +I+ VNGMLLN K VFVG IP+K+R+ +
Sbjct: 166 NILSCKVAQDEFSNSRGYGFVHYETAEAANNAIKHVNGMLLNEKKVFVGHHIPKKDRQSK 225
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPE 254
E FTNVY+KN + DE+ + MFE YG ITS + + DG SRGFGFV ++ +
Sbjct: 226 FDEMKANFTNVYVKNIDPEVTDEEFRTMFENYGPITSASLSRDQDGVSRGFGFVNFQEHQ 285
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAE-RTQELKRRFEMLK 296
A KAV+ + E+ G+ LY +K A R R M +
Sbjct: 286 HAAKAVEELHESELKGQTLYPLELRKLASTRVSICTSRISMTR 328
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 117/227 (51%), Gaps = 18/227 (7%)
Query: 111 GNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSIE 169
++++ L+ S+ +++ FS G++ S +V +D S GY +V++ +++E
Sbjct: 53 ASLYVGELEPSVTEAMLFELFSTIGNVASIRVCRDAVTRRSLGYSYVNYNNTADGERALE 112
Query: 170 KVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGT 229
++N L+ + I +R+ L + + NV+IKN +++ L + F +G
Sbjct: 113 ELNYTLIKGRPCR----IMWSQRDPALRKTGQ--GNVFIKNLDTAIDNKALHDTFAAFGN 166
Query: 230 ITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S +V ++ SRG+GFV YE+ E A A++ NG ++ K ++VG K +R
Sbjct: 167 ILSCKVAQDEFSNSRGYGFVHYETAEAANNAIKHVNGMLLNEKKVFVGHHIPKKDR---- 222
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSA 335
+ +F+ +K N+YVKN+D + DE R F +G ITSA
Sbjct: 223 QSKFDEMKA------NFTNVYVKNIDPEVTDEEFRTMFENYGPITSA 263
Score = 45.8 bits (107), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 61/134 (45%), Gaps = 18/134 (13%)
Query: 205 NVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQA 262
++Y+ + L E+F G + S RV + +S G+ +V Y + E+A++
Sbjct: 54 SLYVGELEPSVTEAMLFELFSTIGNVASIRVCRDAVTRRSLGYSYVNYNNTADGERALEE 113
Query: 263 WNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERL 322
N + G+ + +Q R L++ QG N+++KNLD +ID++ L
Sbjct: 114 LNYTLIKGRPCRIMWSQ----RDPALRKTG-----------QG-NVFIKNLDTAIDNKAL 157
Query: 323 RKEFTPFGTITSAK 336
F FG I S K
Sbjct: 158 HDTFAAFGNILSCK 171
>gi|428673176|gb|EKX74089.1| polyadenylate-binding protein, putative [Babesia equi]
Length = 663
Score = 253 bits (647), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 130/263 (49%), Positives = 178/263 (67%), Gaps = 6/263 (2%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D E AL+++N+ +KG P RIMWS +DP+LRKSG GN+F+KNLD+SID KA YDTFS FG
Sbjct: 84 DAEAALESLNYIDIKGHPTRIMWSNKDPTLRKSGAGNIFVKNLDRSIDTKAFYDTFSHFG 143
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
ILSCKVA DE G SKGYGFVH++TEE+A ++IEKVNGM++ K V V FI +++R+
Sbjct: 144 PILSCKVAMDENGVSKGYGFVHYDTEESAKEAIEKVNGMVIGGKKVEVSPFIKKQDRDP- 202
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEF 255
+FTN+Y++NF +++E LK+ + YG ITS ++ DGK R F FV + PE
Sbjct: 203 --ASVDVFTNLYVRNFPVSWDEEALKQFLDKYGEITSM-MIKEDGKGRKFAFVNFAEPEM 259
Query: 256 AEKAVQAWNGKEVD--GKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNL 313
A++AV+A NG +++ + L V Q KA+R LK ++ + NLY+KNL
Sbjct: 260 AKEAVEALNGTKLEEGSEPLLVCPHQDKAKRQAFLKSQYISGLDGSIASKASSNLYIKNL 319
Query: 314 DDSIDDERLRKEFTPFGTITSAK 336
DDS DE L++ F FG+ITS K
Sbjct: 320 DDSFTDESLQELFGQFGSITSCK 342
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/192 (34%), Positives = 106/192 (55%), Gaps = 15/192 (7%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
N++++N S D +A+ +G I S + +D G + + FV+F E A +++E +
Sbjct: 210 NLYVRNFPVSWDEEALKQFLDKYGEITSMMIKED--GKGRKFAFVNFAEPEMAKEAVEAL 267
Query: 172 NGMLL--NSKIVFVGKFIPRKEREKELGEK----------AKLFTNVYIKNFGEDFNDEK 219
NG L S+ + V + +R+ L + +K +N+YIKN + F DE
Sbjct: 268 NGTKLEEGSEPLLVCPHQDKAKRQAFLKSQYISGLDGSIASKASSNLYIKNLDDSFTDES 327
Query: 220 LKEMFEPYGTITSYRVMNN-DGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRA 278
L+E+F +G+ITS ++M + G SRGFGFV + PE A KA+ + K V GK LYVG A
Sbjct: 328 LQELFGQFGSITSCKIMRDASGVSRGFGFVCFSRPEEATKAIAGMHLKIVKGKPLYVGLA 387
Query: 279 QKKAERTQELKR 290
+KK +R L++
Sbjct: 388 EKKEQRLSRLQQ 399
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 59/100 (59%)
Query: 102 DPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETE 161
D S+ N++IKNLD S ++++ + F FGSI SCK+ +D G S+G+GFV F
Sbjct: 303 DGSIASKASSNLYIKNLDDSFTDESLQELFGQFGSITSCKIMRDASGVSRGFGFVCFSRP 362
Query: 162 EAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAK 201
E A K+I ++ ++ K ++VG +++R L + ++
Sbjct: 363 EEATKAIAGMHLKIVKGKPLYVGLAEKKEQRLSRLQQSSR 402
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 61/135 (45%), Gaps = 18/135 (13%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND--GKSRGFGFVAYESPEFAEKAVQ 261
++Y+ + D + L E+F G ++S RV + KS G+ +V Y S + AE A++
Sbjct: 31 ASLYVGDLQPDVTEAILYEVFNSVGPVSSIRVCRDSITRKSLGYAYVNYYSVQDAEAALE 90
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDER 321
+ N ++ G + + K L + N++VKNLD SID +
Sbjct: 91 SLNYIDIKGHPTRIMWSNKDPT----------------LRKSGAGNIFVKNLDRSIDTKA 134
Query: 322 LRKEFTPFGTITSAK 336
F+ FG I S K
Sbjct: 135 FYDTFSHFGPILSCK 149
>gi|356572504|ref|XP_003554408.1| PREDICTED: probable polyadenylate-binding protein At2g36660-like
[Glycine max]
Length = 636
Score = 253 bits (646), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 127/262 (48%), Positives = 181/262 (69%), Gaps = 3/262 (1%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D RA++ N L G+ +R+MWS+RDP RKS +GN+F+KNL +SIDN + D F +G
Sbjct: 65 DAIRAIELKNNSTLNGKAMRVMWSRRDPDARKSAIGNLFVKNLPESIDNAGLQDIFKKYG 124
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILS KV E G SKGYGFV FE+EE++ +IEK+NG + K ++VGKF+ + +R
Sbjct: 125 NILSSKVVTSEDGKSKGYGFVQFESEESSKVAIEKLNGYTVADKELYVGKFVKKSDRILP 184
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPE 254
G A+ +TN+Y+KN D ++ L+E F +G I S + +N+G S+GFGFV Y++P+
Sbjct: 185 -GPDAR-YTNLYMKNLDLDVSEATLQEKFSSFGKIVSLVIAKDNNGMSKGFGFVNYDNPD 242
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A+KA++A NG ++ KILYV RAQKKAER Q L +FE + E++ +Y+G N+YVKN+D
Sbjct: 243 DAKKAMEAMNGSQLGSKILYVARAQKKAEREQILHHQFEEKQKEQILKYKGSNIYVKNID 302
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
D + DE LR F+ GTITSAK
Sbjct: 303 DHVSDEELRDHFSACGTITSAK 324
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 73/184 (39%), Positives = 117/184 (63%), Gaps = 11/184 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
N+++KNLD + + + FS+FG I+S +A+D G SKG+GFV+++ + A K++E +
Sbjct: 192 NLYMKNLDLDVSEATLQEKFSSFGKIVSLVIAKDNNGMSKGFGFVNYDNPDDAKKAMEAM 251
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELG------EKAKLF----TNVYIKNFGEDFNDEKLK 221
NG L SKI++V + + ERE+ L +K ++ +N+Y+KN + +DE+L+
Sbjct: 252 NGSQLGSKILYVARAQKKAEREQILHHQFEEKQKEQILKYKGSNIYVKNIDDHVSDEELR 311
Query: 222 EMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
+ F GTITS ++M +D G S+GFGFV + +PE A KAV ++G GK LYV AQ+
Sbjct: 312 DHFSACGTITSAKIMRDDKGISKGFGFVCFSTPEEANKAVNTFHGFMYHGKPLYVALAQR 371
Query: 281 KAER 284
K +R
Sbjct: 372 KEDR 375
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/234 (31%), Positives = 128/234 (54%), Gaps = 21/234 (8%)
Query: 103 PSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQ-GNSKGYGFVHFETE 161
PS+ + ++++ +L + + + D FS F S+ S +V +D G S YG+++F +
Sbjct: 5 PSV-AAAPASLYVGDLHPDVSDSHLVDAFSEFKSLASVRVCKDSSTGKSLCYGYLNFVSP 63
Query: 162 EAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLK 221
+ A ++IE N LN K + V R++ + + N+++KN E ++ L+
Sbjct: 64 QDAIRAIELKNNSTLNGKAMRV--MWSRRDPD----ARKSAIGNLFVKNLPESIDNAGLQ 117
Query: 222 EMFEPYGTITSYRVMNN-DGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
++F+ YG I S +V+ + DGKS+G+GFV +ES E ++ A++ NG V K LYVG+ K
Sbjct: 118 DIFKKYGNILSSKVVTSEDGKSKGYGFVQFESEESSKVAIEKLNGYTVADKELYVGKFVK 177
Query: 281 KAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITS 334
K++R RY NLY+KNLD + + L+++F+ FG I S
Sbjct: 178 KSDRILPGPDA----------RY--TNLYMKNLDLDVSEATLQEKFSSFGKIVS 219
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 54/83 (65%), Gaps = 1/83 (1%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
N+++KN+D + ++ + D FSA G+I S K+ +D++G SKG+GFV F T E ANK++
Sbjct: 295 NIYVKNIDDHVSDEELRDHFSACGTITSAKIMRDDKGISKGFGFVCFSTPEEANKAVNTF 354
Query: 172 NGMLLNSKIVFVGKFIPRKEREK 194
+G + + K ++V RKE K
Sbjct: 355 HGFMYHGKPLYVA-LAQRKEDRK 376
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 68/136 (50%), Gaps = 20/136 (14%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND--GKSRGFGFVAYESPEFAEKAVQ 261
++Y+ + D +D L + F + ++ S RV + GKS +G++ + SP+ A +A++
Sbjct: 12 ASLYVGDLHPDVSDSHLVDAFSEFKSLASVRVCKDSSTGKSLCYGYLNFVSPQDAIRAIE 71
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGV-NLYVKNLDDSIDDE 320
N ++GK + V +++ + R + NL+VKNL +SID+
Sbjct: 72 LKNNSTLNGKAMRVMWSRRDPDA-----------------RKSAIGNLFVKNLPESIDNA 114
Query: 321 RLRKEFTPFGTITSAK 336
L+ F +G I S+K
Sbjct: 115 GLQDIFKKYGNILSSK 130
>gi|313232178|emb|CBY09289.1| unnamed protein product [Oikopleura dioica]
Length = 611
Score = 252 bits (644), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 138/262 (52%), Positives = 175/262 (66%), Gaps = 16/262 (6%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D ERA+DTMNF L + S K + K FSAFG
Sbjct: 64 DAERAIDTMNFIQLSVNLASAISSS---------------KTWTRLSTTKCCTIPFSAFG 108
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCKV + G SKGYGFVHFETEEAA K+IEK++GML+N K VFVG+F R ER +E
Sbjct: 109 NILSCKVNVNLAGESKGYGFVHFETEEAAVKAIEKLDGMLMNDKKVFVGRFKSRGERVRE 168
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPE 254
G++AK FTNV+IKN +++D KL E+F +G++ S + ++ GKSR FGFV++E+ E
Sbjct: 169 YGDRAKQFTNVFIKNLPAEWDDAKLTEVFGEHGSVMSVALATDENGKSRQFGFVSFETHE 228
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
AEK V+ + KE +GK ++VGRAQKKAER ELK +FE LK ER RYQGVNLYVKNLD
Sbjct: 229 CAEKVVEKLHDKEFEGKKIFVGRAQKKAERQAELKVKFEKLKHERNQRYQGVNLYVKNLD 288
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
DSI D+ LR+ F P+G ITS+K
Sbjct: 289 DSITDDILREHFAPYGNITSSK 310
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 77/195 (39%), Positives = 110/195 (56%), Gaps = 14/195 (7%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NVFIKNL D+ + + F GS++S +A DE G S+ +GFV FET E A K +EK+
Sbjct: 178 NVFIKNLPAEWDDAKLTEVFGEHGSVMSVALATDENGKSRQFGFVSFETHECAEKVVEKL 237
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKLK 221
+ K +FVG+ + ER+ EL K + N+Y+KN + D+ L+
Sbjct: 238 HDKEFEGKKIFVGRAQKKAERQAELKVKFEKLKHERNQRYQGVNLYVKNLDDSITDDILR 297
Query: 222 EMFEPYGTITSYRVMNND----GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGR 277
E F PYG ITS +VM + +S+GFGFV + S E A KAV NG+ + K LYV
Sbjct: 298 EHFAPYGNITSSKVMTDTDVEGTRSKGFGFVCFTSAEEATKAVTEMNGRIIASKPLYVAL 357
Query: 278 AQKKAERTQELKRRF 292
AQ+K ER L++++
Sbjct: 358 AQRKDERKAHLQQQY 372
Score = 77.4 bits (189), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 109/227 (48%), Gaps = 33/227 (14%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L +YD FS G +LS +V +D S GY +V+F+ E A ++I
Sbjct: 10 MASLYVGDLHPEATEAMLYDKFSQAGPVLSIRVCRDMITRRSLGYAYVNFQRPEDAERAI 69
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N + L+ + +K +T + + F +G
Sbjct: 70 DTMNFIQLSVNLA-------------SAISSSKTWTRLS--------TTKCCTIPFSAFG 108
Query: 229 TITSYRV-MNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQE 287
I S +V +N G+S+G+GFV +E+ E A KA++ +G ++ K ++VGR + + ER +E
Sbjct: 109 NILSCKVNVNLAGESKGYGFVHFETEEAAVKAIEKLDGMLMNDKKVFVGRFKSRGERVRE 168
Query: 288 LKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITS 334
R + Q N+++KNL DD +L + F G++ S
Sbjct: 169 YGDRAK----------QFTNVFIKNLPAEWDDAKLTEVFGEHGSVMS 205
>gi|147769692|emb|CAN65531.1| hypothetical protein VITISV_039630 [Vitis vinifera]
Length = 555
Score = 252 bits (643), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 127/265 (47%), Positives = 185/265 (69%), Gaps = 5/265 (1%)
Query: 73 YMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFS 132
Y D +AL +N L G+P+RIMWS RDP RK+G+ N+F+KNLD SI++ ++ D F
Sbjct: 79 YPSDASKALACLNHTKLMGKPMRIMWSHRDPLPRKTGLANLFVKNLDPSINSASLQDIFC 138
Query: 133 AFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKER 192
FG+ILSCKVA+ E G SK +GFV F+++++A ++ +N +L+ K +FV KF+ + ER
Sbjct: 139 KFGNILSCKVAE-ENGKSKCFGFVQFDSDDSATAALNALNDTMLDGKKLFVSKFVKKCER 197
Query: 193 EKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYE 251
KE E+ K FTNVY+KN GED ++ +++ F +G + + +M + +GKSRGFGFV +E
Sbjct: 198 -KEASEETK-FTNVYVKNLGEDLTEDIIRDKFSEFGKVGTVVIMKDGNGKSRGFGFVNFE 255
Query: 252 SPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVK 311
SP+ A+KAV+A NG + K L+VGRAQKKAER + LK EM+ + + + NLYVK
Sbjct: 256 SPDEAKKAVEALNGAMLGSKKLFVGRAQKKAERQELLKHEKEMVNC-NIGKEKASNLYVK 314
Query: 312 NLDDSIDDERLRKEFTPFGTITSAK 336
NLD S+DD++L++ F+ G ITSAK
Sbjct: 315 NLDASVDDDKLQEHFSSCGQITSAK 339
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 75/219 (34%), Positives = 128/219 (58%), Gaps = 14/219 (6%)
Query: 80 ALDTMNFDALKGRPIRIMW----SQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
AL+ +N L G+ + + +R + ++ NV++KNL + + + D FS FG
Sbjct: 172 ALNALNDTMLDGKKLFVSKFVKKCERKEASEETKFTNVYVKNLGEDLTEDIIRDKFSEFG 231
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ + + +D G S+G+GFV+FE+ + A K++E +NG +L SK +FVG+ + ER++
Sbjct: 232 KVGTVVIMKDGNGKSRGFGFVNFESPDEAKKAVEALNGAMLGSKKLFVGRAQKKAERQEL 291
Query: 196 LGEKAKLF---------TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GKSRGF 245
L + ++ +N+Y+KN +D+KL+E F G ITS +VM +D G S+GF
Sbjct: 292 LKHEKEMVNCNIGKEKASNLYVKNLDASVDDDKLQEHFSSCGQITSAKVMRHDSGLSKGF 351
Query: 246 GFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAER 284
GFV + + E A+KA+ NG + G+ LY+ AQ+K +R
Sbjct: 352 GFVCFSTSEEAQKALTTLNGTLLHGRSLYIAMAQRKEDR 390
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 112/221 (50%), Gaps = 19/221 (8%)
Query: 113 VFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSIEKV 171
+++ +LD + + D FS G ++S ++ +D G S Y +V+F A+K++ +
Sbjct: 31 LYVGDLDPEVSEVELVDVFSGMGPLVSVRLCRDSLSGKSLCYAYVNFFYPSDASKALACL 90
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTIT 231
N L K + + + R ++ G N+++KN N L+++F +G I
Sbjct: 91 NHTKLMGKPMRI-MWSHRDPLPRKTG-----LANLFVKNLDPSINSASLQDIFCKFGNIL 144
Query: 232 SYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRR 291
S +V +GKS+ FGFV ++S + A A+ A N +DGK L+V + KK ER K
Sbjct: 145 SCKVAEENGKSKCFGFVQFDSDDSATAALNALNDTMLDGKKLFVSKFVKKCER----KEA 200
Query: 292 FEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTI 332
E K N+YVKNL + + ++ +R +F+ FG +
Sbjct: 201 SEETKF--------TNVYVKNLGEDLTEDIIRDKFSEFGKV 233
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 56/88 (63%)
Query: 107 KSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANK 166
K N+++KNLD S+D+ + + FS+ G I S KV + + G SKG+GFV F T E A K
Sbjct: 305 KEKASNLYVKNLDASVDDDKLQEHFSSCGQITSAKVMRHDSGLSKGFGFVCFSTSEEAQK 364
Query: 167 SIEKVNGMLLNSKIVFVGKFIPRKEREK 194
++ +NG LL+ + +++ +++R++
Sbjct: 365 ALTTLNGTLLHGRSLYIAMAQRKEDRQR 392
>gi|10086463|gb|AAG12523.1|AC015446_4 Similar to Polyadenylate-Binding Proteins 2 and 5 [Arabidopsis
thaliana]
Length = 338
Score = 249 bits (637), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 131/259 (50%), Positives = 180/259 (69%), Gaps = 7/259 (2%)
Query: 80 ALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILS 139
A++ +N+ LKG+P+RIM+S+RDPS R SG GNVF+KNLD+SIDNK + D FSAFG +LS
Sbjct: 71 AMEVLNYCKLKGKPMRIMFSERDPSNRMSGRGNVFVKNLDESIDNKQLCDMFSAFGKVLS 130
Query: 140 CKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEK 199
CKVA+D G SKGYGFV F ++ + + NG L+ ++ + V F+ R + +K
Sbjct: 131 CKVARDASGVSKGYGFVQFYSDLSVYTACNFHNGTLIRNQHIHVCPFVSRGQ-----WDK 185
Query: 200 AKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPEFAEK 258
+++FTNVY+KN E D LK +F +G ITS VM + +GKSR FGFV +E E A
Sbjct: 186 SRVFTNVYVKNLVETATDADLKRLFGEFGEITSAVVMKDGEGKSRRFGFVNFEKAEAAVT 245
Query: 259 AVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIER-LNRYQGVNLYVKNLDDSI 317
A++ NG VD K L+VGRAQ+K RT++LK +FE+ KI R + +G+NLYVKNLDDS+
Sbjct: 246 AIEKMNGVVVDEKELHVGRAQRKTNRTEDLKAKFELEKIIRDMKTRKGMNLYVKNLDDSV 305
Query: 318 DDERLRKEFTPFGTITSAK 336
D+ +L + F+ FGTITS K
Sbjct: 306 DNTKLEELFSEFGTITSCK 324
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 80/138 (57%), Gaps = 11/138 (7%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV++KNL ++ + + F FG I S V +D +G S+ +GFV+FE EAA +IEK+
Sbjct: 191 NVYVKNLVETATDADLKRLFGEFGEITSAVVMKDGEGKSRRFGFVNFEKAEAAVTAIEKM 250
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKL-----------FTNVYIKNFGEDFNDEKL 220
NG++++ K + VG+ + R ++L K +L N+Y+KN + ++ KL
Sbjct: 251 NGVVVDEKELHVGRAQRKTNRTEDLKAKFELEKIIRDMKTRKGMNLYVKNLDDSVDNTKL 310
Query: 221 KEMFEPYGTITSYRVMNN 238
+E+F +GTITS + N
Sbjct: 311 EELFSEFGTITSCKYACN 328
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 104/222 (46%), Gaps = 24/222 (10%)
Query: 117 NLDKSIDNKAMYDTFSAFGS-ILSCKVAQDEQ-GNSKGYGFVHFETEEAANKSIEKVNGM 174
+LD S++ +Y FS F I S KV D G S GYG+V+F A ++E +N
Sbjct: 19 DLDSSVEEGDLYTKFSEFTHDISSVKVCCDRNTGLSLGYGYVNFNHSSQAKTAMEVLNYC 78
Query: 175 LLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYR 234
L K + + F R + G NV++KN E ++++L +MF +G + S +
Sbjct: 79 KLKGKPMRI-MFSERDPSNRMSGR-----GNVFVKNLDESIDNKQLCDMFSAFGKVLSCK 132
Query: 235 VMNN-DGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFE 293
V + G S+G+GFV + S A NG + + ++V + + + R F
Sbjct: 133 VARDASGVSKGYGFVQFYSDLSVYTACNFHNGTLIRNQHIHVCPFVSRGQWDKS--RVF- 189
Query: 294 MLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSA 335
N+YVKNL ++ D L++ F FG ITSA
Sbjct: 190 ------------TNVYVKNLVETATDADLKRLFGEFGEITSA 219
Score = 42.4 bits (98), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 30/47 (63%), Gaps = 2/47 (4%)
Query: 101 RDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQ 147
RD RK N+++KNLD S+DN + + FS FG+I SCK A + +
Sbjct: 286 RDMKTRKGM--NLYVKNLDDSVDNTKLEELFSEFGTITSCKYACNSK 330
>gi|225442420|ref|XP_002277538.1| PREDICTED: polyadenylate-binding protein, cytoplasmic and
nuclear-like [Vitis vinifera]
Length = 630
Score = 249 bits (637), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 126/262 (48%), Positives = 184/262 (70%), Gaps = 5/262 (1%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D +AL +N L G+P+RIMWS RDP RK+G+ N+F+KNLD SI++ ++ D F FG
Sbjct: 82 DASKALACLNHTKLMGKPMRIMWSHRDPLPRKTGLANLFVKNLDPSINSASLQDIFCKFG 141
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCKVA+ E G SK +GFV F+++++A ++ +N +L+ K +FV KF+ + ER KE
Sbjct: 142 NILSCKVAE-ENGKSKCFGFVQFDSDDSATAALNALNDTMLDGKKLFVSKFVKKCER-KE 199
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPE 254
E+ K FTNVY+KN GED ++ +++ F +G + + +M + +GKSRGFGFV +ESP+
Sbjct: 200 ASEETK-FTNVYVKNLGEDLTEDIIRDKFSEFGKVGTVVIMKDGNGKSRGFGFVNFESPD 258
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A+KAV+A NG + K L+VGRAQKKAER + LK EM+ + + + NLYVKNLD
Sbjct: 259 EAKKAVEALNGAMLGSKKLFVGRAQKKAERQELLKHEKEMVNC-NIGKEKASNLYVKNLD 317
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
S+DD++L++ F+ G ITSAK
Sbjct: 318 ASVDDDKLQEHFSSCGQITSAK 339
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 76/224 (33%), Positives = 131/224 (58%), Gaps = 14/224 (6%)
Query: 80 ALDTMNFDALKGRPIRIMW----SQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
AL+ +N L G+ + + +R + ++ NV++KNL + + + D FS FG
Sbjct: 172 ALNALNDTMLDGKKLFVSKFVKKCERKEASEETKFTNVYVKNLGEDLTEDIIRDKFSEFG 231
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ + + +D G S+G+GFV+FE+ + A K++E +NG +L SK +FVG+ + ER++
Sbjct: 232 KVGTVVIMKDGNGKSRGFGFVNFESPDEAKKAVEALNGAMLGSKKLFVGRAQKKAERQEL 291
Query: 196 LGEKAKLF---------TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GKSRGF 245
L + ++ +N+Y+KN +D+KL+E F G ITS +VM +D G S+GF
Sbjct: 292 LKHEKEMVNCNIGKEKASNLYVKNLDASVDDDKLQEHFSSCGQITSAKVMRHDSGLSKGF 351
Query: 246 GFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELK 289
GFV + + E A+KA+ NG + G+ LY+ AQ+K +R + L+
Sbjct: 352 GFVCFSTSEEAQKALTTLNGTLLHGRSLYIAMAQRKEDRQRVLR 395
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 112/221 (50%), Gaps = 19/221 (8%)
Query: 113 VFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSIEKV 171
+++ +LD + + D FS G ++S ++ +D G S Y +V+F A+K++ +
Sbjct: 31 LYVGDLDPEVSEVELVDVFSGMGPLVSVRLCRDSLSGKSLCYAYVNFFHPSDASKALACL 90
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTIT 231
N L K + + + R ++ G N+++KN N L+++F +G I
Sbjct: 91 NHTKLMGKPMRI-MWSHRDPLPRKTG-----LANLFVKNLDPSINSASLQDIFCKFGNIL 144
Query: 232 SYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRR 291
S +V +GKS+ FGFV ++S + A A+ A N +DGK L+V + KK ER K
Sbjct: 145 SCKVAEENGKSKCFGFVQFDSDDSATAALNALNDTMLDGKKLFVSKFVKKCER----KEA 200
Query: 292 FEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTI 332
E K N+YVKNL + + ++ +R +F+ FG +
Sbjct: 201 SEETKF--------TNVYVKNLGEDLTEDIIRDKFSEFGKV 233
>gi|356505295|ref|XP_003521427.1| PREDICTED: probable polyadenylate-binding protein At2g36660-like
[Glycine max]
Length = 632
Score = 249 bits (637), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 125/262 (47%), Positives = 180/262 (68%), Gaps = 3/262 (1%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D RA++ N L G+ +R+MWS+RDP RK+ +GN+F+KNL +SIDN + D F +G
Sbjct: 65 DAIRAIELKNNSTLNGKAMRVMWSRRDPDARKNAIGNLFVKNLPESIDNAGLQDMFKKYG 124
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILS KV E G SKGYGFV FE+EE++N +IEK+NG + K ++VGKF+ + +R
Sbjct: 125 NILSSKVVMSEDGKSKGYGFVQFESEESSNVAIEKLNGSTVGDKQLYVGKFVKKSDRILP 184
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPE 254
G A+ +TN+Y+KN D ++ L+E F +G I S + +N G S+GFGFV Y++P+
Sbjct: 185 -GPDAR-YTNLYMKNLDLDVSEATLQEKFSSFGKIVSLVIAKDNIGMSKGFGFVNYDNPD 242
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A++A++A NG ++ KILYV RAQKKAER Q L +FE + E++ +Y+G N+YVKN+D
Sbjct: 243 DAKRAMEAMNGSKLGSKILYVARAQKKAEREQILHHQFEEKRKEQILKYKGSNIYVKNID 302
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
D + DE LR F+ G ITSAK
Sbjct: 303 DHVSDEELRDHFSACGIITSAK 324
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 71/184 (38%), Positives = 115/184 (62%), Gaps = 11/184 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
N+++KNLD + + + FS+FG I+S +A+D G SKG+GFV+++ + A +++E +
Sbjct: 192 NLYMKNLDLDVSEATLQEKFSSFGKIVSLVIAKDNIGMSKGFGFVNYDNPDDAKRAMEAM 251
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGE------KAKLF----TNVYIKNFGEDFNDEKLK 221
NG L SKI++V + + ERE+ L K ++ +N+Y+KN + +DE+L+
Sbjct: 252 NGSKLGSKILYVARAQKKAEREQILHHQFEEKRKEQILKYKGSNIYVKNIDDHVSDEELR 311
Query: 222 EMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
+ F G ITS ++M +D G S+GFGFV + +PE A KAV ++G GK LYV AQ+
Sbjct: 312 DHFSACGIITSAKIMRDDKGISKGFGFVCFSTPEEANKAVNTFHGFMFHGKPLYVALAQR 371
Query: 281 KAER 284
K +R
Sbjct: 372 KEDR 375
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/234 (32%), Positives = 126/234 (53%), Gaps = 20/234 (8%)
Query: 103 PSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQ-GNSKGYGFVHFETE 161
P + ++++ +L ++ + + D FS F S+ S +V +D G S YG+V+F +
Sbjct: 4 PPSVAAAPASLYVGDLHPNVSDNHLVDAFSDFESLASVRVCKDSSTGKSLCYGYVNFVSP 63
Query: 162 EAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLK 221
+ A ++IE N LN K + V R++ + + N+++KN E ++ L+
Sbjct: 64 QDAIRAIELKNNSTLNGKAMRV--MWSRRDPD----ARKNAIGNLFVKNLPESIDNAGLQ 117
Query: 222 EMFEPYGTITSYR-VMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
+MF+ YG I S + VM+ DGKS+G+GFV +ES E + A++ NG V K LYVG+ K
Sbjct: 118 DMFKKYGNILSSKVVMSEDGKSKGYGFVQFESEESSNVAIEKLNGSTVGDKQLYVGKFVK 177
Query: 281 KAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITS 334
K++R RY NLY+KNLD + + L+++F+ FG I S
Sbjct: 178 KSDRILPGPDA----------RY--TNLYMKNLDLDVSEATLQEKFSSFGKIVS 219
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 70/135 (51%), Gaps = 17/135 (12%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQ----------------RDPSLRKSGVGNVFIKNLD 119
D +RA++ MN L + + + +Q R + K N+++KN+D
Sbjct: 243 DAKRAMEAMNGSKLGSKILYVARAQKKAEREQILHHQFEEKRKEQILKYKGSNIYVKNID 302
Query: 120 KSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSK 179
+ ++ + D FSA G I S K+ +D++G SKG+GFV F T E ANK++ +G + + K
Sbjct: 303 DHVSDEELRDHFSACGIITSAKIMRDDKGISKGFGFVCFSTPEEANKAVNTFHGFMFHGK 362
Query: 180 IVFVGKFIPRKEREK 194
++V RKE K
Sbjct: 363 PLYVA-LAQRKEDRK 376
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 68/135 (50%), Gaps = 18/135 (13%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND--GKSRGFGFVAYESPEFAEKAVQ 261
++Y+ + + +D L + F + ++ S RV + GKS +G+V + SP+ A +A++
Sbjct: 12 ASLYVGDLHPNVSDNHLVDAFSDFESLASVRVCKDSSTGKSLCYGYVNFVSPQDAIRAIE 71
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDER 321
N ++GK + V +++ + R N NL+VKNL +SID+
Sbjct: 72 LKNNSTLNGKAMRVMWSRRDPD--------------ARKNAIG--NLFVKNLPESIDNAG 115
Query: 322 LRKEFTPFGTITSAK 336
L+ F +G I S+K
Sbjct: 116 LQDMFKKYGNILSSK 130
>gi|297743165|emb|CBI36032.3| unnamed protein product [Vitis vinifera]
Length = 476
Score = 248 bits (634), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 126/262 (48%), Positives = 184/262 (70%), Gaps = 5/262 (1%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D +AL +N L G+P+RIMWS RDP RK+G+ N+F+KNLD SI++ ++ D F FG
Sbjct: 82 DASKALACLNHTKLMGKPMRIMWSHRDPLPRKTGLANLFVKNLDPSINSASLQDIFCKFG 141
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCKVA+ E G SK +GFV F+++++A ++ +N +L+ K +FV KF+ + ER KE
Sbjct: 142 NILSCKVAE-ENGKSKCFGFVQFDSDDSATAALNALNDTMLDGKKLFVSKFVKKCER-KE 199
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPE 254
E+ K FTNVY+KN GED ++ +++ F +G + + +M + +GKSRGFGFV +ESP+
Sbjct: 200 ASEETK-FTNVYVKNLGEDLTEDIIRDKFSEFGKVGTVVIMKDGNGKSRGFGFVNFESPD 258
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A+KAV+A NG + K L+VGRAQKKAER + LK EM+ + + + NLYVKNLD
Sbjct: 259 EAKKAVEALNGAMLGSKKLFVGRAQKKAERQELLKHEKEMVNCN-IGKEKASNLYVKNLD 317
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
S+DD++L++ F+ G ITSAK
Sbjct: 318 ASVDDDKLQEHFSSCGQITSAK 339
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 76/224 (33%), Positives = 131/224 (58%), Gaps = 14/224 (6%)
Query: 80 ALDTMNFDALKGRPIRIMW----SQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
AL+ +N L G+ + + +R + ++ NV++KNL + + + D FS FG
Sbjct: 172 ALNALNDTMLDGKKLFVSKFVKKCERKEASEETKFTNVYVKNLGEDLTEDIIRDKFSEFG 231
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ + + +D G S+G+GFV+FE+ + A K++E +NG +L SK +FVG+ + ER++
Sbjct: 232 KVGTVVIMKDGNGKSRGFGFVNFESPDEAKKAVEALNGAMLGSKKLFVGRAQKKAERQEL 291
Query: 196 LGEKAKLF---------TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GKSRGF 245
L + ++ +N+Y+KN +D+KL+E F G ITS +VM +D G S+GF
Sbjct: 292 LKHEKEMVNCNIGKEKASNLYVKNLDASVDDDKLQEHFSSCGQITSAKVMRHDSGLSKGF 351
Query: 246 GFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELK 289
GFV + + E A+KA+ NG + G+ LY+ AQ+K +R + L+
Sbjct: 352 GFVCFSTSEEAQKALTTLNGTLLHGRSLYIAMAQRKEDRQRVLR 395
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 111/221 (50%), Gaps = 19/221 (8%)
Query: 113 VFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSIEKV 171
+++ +LD + + D FS G ++S ++ +D G S Y +V+F A+K++ +
Sbjct: 31 LYVGDLDPEVSEVELVDVFSGMGPLVSVRLCRDSLSGKSLCYAYVNFFHPSDASKALACL 90
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTIT 231
N L K + + + R ++ G N+++KN N L+++F +G I
Sbjct: 91 NHTKLMGKPMRI-MWSHRDPLPRKTG-----LANLFVKNLDPSINSASLQDIFCKFGNIL 144
Query: 232 SYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRR 291
S +V +GKS+ FGFV ++S + A A+ A N +DGK L+V + KK ER
Sbjct: 145 SCKVAEENGKSKCFGFVQFDSDDSATAALNALNDTMLDGKKLFVSKFVKKCERK------ 198
Query: 292 FEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTI 332
E + N+YVKNL + + ++ +R +F+ FG +
Sbjct: 199 ------EASEETKFTNVYVKNLGEDLTEDIIRDKFSEFGKV 233
>gi|345316987|ref|XP_003429815.1| PREDICTED: embryonic polyadenylate-binding protein A-like
[Ornithorhynchus anatinus]
Length = 540
Score = 248 bits (634), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 132/273 (48%), Positives = 163/273 (59%), Gaps = 57/273 (20%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D ERALDTMNF+ +KGRPIRIMWSQRDP LRKSGVGN+FIKNLD SIDNKA+YDTFS FG
Sbjct: 64 DAERALDTMNFEVIKGRPIRIMWSQRDPGLRKSGVGNIFIKNLDDSIDNKALYDTFSTFG 123
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGML-------------------- 175
+ILSCKV DE G S+G+GFVHFET EAA+++I +NGML
Sbjct: 124 NILSCKVVCDEHG-SRGFGFVHFETREAASQAISTMNGMLLNDRKVGAQPCCPAGRVGSG 182
Query: 176 --------------------------LNSKIVFVGKFIPRKEREKELGEKAKLF------ 203
LN ++++VG+ R ER+ EL K +
Sbjct: 183 KRPPSGRSRPAGPVPAQAVTSMNGKELNGRVLYVGRAQKRTERQSELKRKFEQIKQERVN 242
Query: 204 ----TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKA 259
N+Y+KN + +DEKL++ F PYGTITS +VM G S+GFGFV + SPE A KA
Sbjct: 243 RYQGVNLYVKNLDDCIDDEKLRKEFSPYGTITSAKVMTESGHSKGFGFVCFSSPEEATKA 302
Query: 260 VQAWNGKEVDGKILYVGRAQKKAERTQELKRRF 292
V NG+ V K LYV AQ+K ER L ++
Sbjct: 303 VTEMNGRIVSTKPLYVALAQRKEERKAILTNQY 335
Score = 174 bits (441), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 95/274 (34%), Positives = 152/274 (55%), Gaps = 53/274 (19%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQD-EQGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + +Y+ FS GSI+S +V +D S GY +++F+ A +++
Sbjct: 10 LASLYVGDLHVDVTEAMLYEKFSPAGSIISIRVCRDVASRRSLGYAYINFQQPADAERAL 69
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N ++ + + + +++ G + N++IKN + +++ L + F +G
Sbjct: 70 DTMNFEVIKGRPIRI------MWSQRDPGLRKSGVGNIFIKNLDDSIDNKALYDTFSTFG 123
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKA----------------------------- 259
I S +V+ ++ SRGFGFV +E+ E A +A
Sbjct: 124 NILSCKVVCDEHGSRGFGFVHFETREAASQAISTMNGMLLNDRKVGAQPCCPAGRVGSGK 183
Query: 260 -----------------VQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNR 302
V + NGKE++G++LYVGRAQK+ ER ELKR+FE +K ER+NR
Sbjct: 184 RPPSGRSRPAGPVPAQAVTSMNGKELNGRVLYVGRAQKRTERQSELKRKFEQIKQERVNR 243
Query: 303 YQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
YQGVNLYVKNLDD IDDE+LRKEF+P+GTITSAK
Sbjct: 244 YQGVNLYVKNLDDCIDDEKLRKEFSPYGTITSAK 277
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 64/106 (60%), Gaps = 9/106 (8%)
Query: 106 RKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAAN 165
R GV N+++KNLD ID++ + FS +G+I S KV E G+SKG+GFV F + E A
Sbjct: 243 RYQGV-NLYVKNLDDCIDDEKLRKEFSPYGTITSAKV-MTESGHSKGFGFVCFSSPEEAT 300
Query: 166 KSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNF 211
K++ ++NG ++++K ++V RKE E+ + TN Y+
Sbjct: 301 KAVTEMNGRIVSTKPLYVA-LAQRKE------ERKAILTNQYMHRL 339
>gi|91805911|gb|ABE65684.1| polyadenylate-binding protein [Arabidopsis thaliana]
Length = 267
Score = 247 bits (631), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 130/258 (50%), Positives = 179/258 (69%), Gaps = 7/258 (2%)
Query: 81 LDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSC 140
++ +N+ LKG+P+RIM+S+RDPS R SG GNVF+KNLD+SIDNK + D FSAFG +LSC
Sbjct: 1 MEVLNYCKLKGKPMRIMFSERDPSNRMSGRGNVFVKNLDESIDNKQLCDMFSAFGKVLSC 60
Query: 141 KVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKA 200
KVA+D G SKGYGFV F ++ + + NG L+ ++ + V F+ R + +K+
Sbjct: 61 KVARDASGVSKGYGFVQFYSDLSVYTACNFHNGTLIRNQHIHVCPFVSRGQ-----WDKS 115
Query: 201 KLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGKSRGFGFVAYESPEFAEKA 259
++FTNVY+KN E D LK +F +G ITS VM + +GKSR FGFV +E E A A
Sbjct: 116 RVFTNVYVKNLVETATDADLKRLFGEFGEITSAVVMKDGEGKSRRFGFVNFEKAEAAVTA 175
Query: 260 VQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIER-LNRYQGVNLYVKNLDDSID 318
++ NG VD K L+VGRAQ+K RT++LK +FE+ KI R + +G+NLYVKNLDDS+D
Sbjct: 176 IEKMNGVVVDEKELHVGRAQRKTNRTEDLKAKFELEKIIRDMKTRKGMNLYVKNLDDSVD 235
Query: 319 DERLRKEFTPFGTITSAK 336
+ +L + F+ FGTITS K
Sbjct: 236 NTKLEELFSEFGTITSCK 253
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 80/138 (57%), Gaps = 11/138 (7%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV++KNL ++ + + F FG I S V +D +G S+ +GFV+FE EAA +IEK+
Sbjct: 120 NVYVKNLVETATDADLKRLFGEFGEITSAVVMKDGEGKSRRFGFVNFEKAEAAVTAIEKM 179
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKL-----------FTNVYIKNFGEDFNDEKL 220
NG++++ K + VG+ + R ++L K +L N+Y+KN + ++ KL
Sbjct: 180 NGVVVDEKELHVGRAQRKTNRTEDLKAKFELEKIIRDMKTRKGMNLYVKNLDDSVDNTKL 239
Query: 221 KEMFEPYGTITSYRVMNN 238
+E+F +GTITS + N
Sbjct: 240 EELFSEFGTITSCKYACN 257
Score = 42.4 bits (98), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 30/47 (63%), Gaps = 2/47 (4%)
Query: 101 RDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQ 147
RD RK N+++KNLD S+DN + + FS FG+I SCK A + +
Sbjct: 215 RDMKTRKGM--NLYVKNLDDSVDNTKLEELFSEFGTITSCKYACNSK 259
>gi|225441084|ref|XP_002264613.1| PREDICTED: probable polyadenylate-binding protein At2g36660 [Vitis
vinifera]
gi|297740018|emb|CBI30200.3| unnamed protein product [Vitis vinifera]
Length = 634
Score = 246 bits (629), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 129/262 (49%), Positives = 182/262 (69%), Gaps = 3/262 (1%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D A++ N L G+ IR+MWS RDP R+SG+GNVF+KNL SIDN + F FG
Sbjct: 65 DASHAIEAKNHTMLHGKVIRVMWSHRDPDARRSGIGNVFVKNLSDSIDNVRLQAMFQKFG 124
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCKV E G SKGYGFV FE+EE AN +IEK+NG +++ K ++ GKF+ ++ ++
Sbjct: 125 NILSCKVVVTEDGKSKGYGFVQFESEEYANAAIEKLNGFIIDGKQIYAGKFV--RKTDRV 182
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPE 254
L +TN+YIKN D +E L+E F +G I S + ++ G SRGFGFV +ESPE
Sbjct: 183 LPNPDAKYTNLYIKNLDPDVTEEALREKFFEFGKIASLVISKDENGMSRGFGFVNFESPE 242
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A++A++A NG ++ K+LYV RAQKKAER Q L+R+FE + E++ +Y+G N+YVKN+D
Sbjct: 243 DAKRALEALNGLQLGSKVLYVARAQKKAEREQLLRRQFEEKRNEQILKYRGSNVYVKNID 302
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
D+++D+ LR+ F+ G ITSAK
Sbjct: 303 DNVNDDDLREHFSVCGKITSAK 324
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/192 (38%), Positives = 119/192 (61%), Gaps = 11/192 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
N++IKNLD + +A+ + F FG I S +++DE G S+G+GFV+FE+ E A +++E +
Sbjct: 192 NLYIKNLDPDVTEEALREKFFEFGKIASLVISKDENGMSRGFGFVNFESPEDAKRALEAL 251
Query: 172 NGMLLNSKIVFVGKFIPRKEREKEL--------GEKAKLF--TNVYIKNFGEDFNDEKLK 221
NG+ L SK+++V + + ERE+ L E+ + +NVY+KN ++ ND+ L+
Sbjct: 252 NGLQLGSKVLYVARAQKKAEREQLLRRQFEEKRNEQILKYRGSNVYVKNIDDNVNDDDLR 311
Query: 222 EMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
E F G ITS ++M + G S+GFGFV + +P+ A KAV ++G K LYV AQ+
Sbjct: 312 EHFSVCGKITSAKLMRDQKGISKGFGFVCFSTPDEASKAVNTFHGYMFHRKPLYVAIAQR 371
Query: 281 KAERTQELKRRF 292
K +R +L+ +
Sbjct: 372 KEDRQAQLQLHY 383
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/234 (30%), Positives = 126/234 (53%), Gaps = 20/234 (8%)
Query: 103 PSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQ-GNSKGYGFVHFETE 161
P + ++++ +L I + ++D FS F S+ S ++ +D G S YG+V+F +
Sbjct: 4 PPTVPAAPASLYVGDLHPDITDGLLFDAFSEFKSLASVRICRDSSSGRSLCYGYVNFISP 63
Query: 162 EAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLK 221
+ A+ +IE N +L+ K++ V ++ + NV++KN + ++ +L+
Sbjct: 64 QDASHAIEAKNHTMLHGKVIRV------MWSHRDPDARRSGIGNVFVKNLSDSIDNVRLQ 117
Query: 222 EMFEPYGTITSYR-VMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
MF+ +G I S + V+ DGKS+G+GFV +ES E+A A++ NG +DGK +Y G+ +
Sbjct: 118 AMFQKFGNILSCKVVVTEDGKSKGYGFVQFESEEYANAAIEKLNGFIIDGKQIYAGKFVR 177
Query: 281 KAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITS 334
K +R +Y NLY+KNLD + +E LR++F FG I S
Sbjct: 178 KTDRVLP----------NPDAKY--TNLYIKNLDPDVTEEALREKFFEFGKIAS 219
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 68/136 (50%), Gaps = 20/136 (14%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM--NNDGKSRGFGFVAYESPEFAEKAVQ 261
++Y+ + D D L + F + ++ S R+ ++ G+S +G+V + SP+ A A++
Sbjct: 12 ASLYVGDLHPDITDGLLFDAFSEFKSLASVRICRDSSSGRSLCYGYVNFISPQDASHAIE 71
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGV-NLYVKNLDDSIDDE 320
A N + GK++ V + + + R G+ N++VKNL DSID+
Sbjct: 72 AKNHTMLHGKVIRVMWSHRDPD-----------------ARRSGIGNVFVKNLSDSIDNV 114
Query: 321 RLRKEFTPFGTITSAK 336
RL+ F FG I S K
Sbjct: 115 RLQAMFQKFGNILSCK 130
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 74/137 (54%), Gaps = 16/137 (11%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQ----------------RDPSLRKSGVGNVFIKNLD 119
D +RAL+ +N L + + + +Q R+ + K NV++KN+D
Sbjct: 243 DAKRALEALNGLQLGSKVLYVARAQKKAEREQLLRRQFEEKRNEQILKYRGSNVYVKNID 302
Query: 120 KSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSK 179
++++ + + FS G I S K+ +D++G SKG+GFV F T + A+K++ +G + + K
Sbjct: 303 DNVNDDDLREHFSVCGKITSAKLMRDQKGISKGFGFVCFSTPDEASKAVNTFHGYMFHRK 362
Query: 180 IVFVGKFIPRKEREKEL 196
++V +++R+ +L
Sbjct: 363 PLYVAIAQRKEDRQAQL 379
>gi|356548313|ref|XP_003542547.1| PREDICTED: probable polyadenylate-binding protein At2g36660-like
[Glycine max]
Length = 495
Score = 246 bits (629), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 132/262 (50%), Positives = 174/262 (66%), Gaps = 3/262 (1%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D RA+ N L G+ IR+MW RDP+ RKSG GNVF+KNL SIDN ++D F +G
Sbjct: 65 DAIRAIKLRNNSYLNGKVIRVMWLHRDPNARKSGRGNVFVKNLAGSIDNAGLHDLFKKYG 124
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILS KV E G SKGYGFV FE EE+AN +IEK+NG + +K ++VGKF+ + +R
Sbjct: 125 NILSSKVVMSEDGKSKGYGFVQFEWEESANNAIEKLNGSTVGNKQIYVGKFVRKGDRILP 184
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPE 254
G AK +TN+YIKN D + L+E F +G I S + +D G S+GF FV YE+P+
Sbjct: 185 -GYDAK-YTNLYIKNLDSDITEALLQEKFSSFGKIISLAISKDDNGLSKGFAFVNYENPD 242
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A+KA++A NG + K LYV RAQKKAER Q L R+FE + E++ +YQ NLYVKN+D
Sbjct: 243 DAKKAMEAMNGLQFGSKYLYVARAQKKAEREQILHRQFEEKRKEQILKYQASNLYVKNID 302
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
D + D+ LR F+ GTITS K
Sbjct: 303 DDVTDKELRDLFSSCGTITSVK 324
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 75/192 (39%), Positives = 119/192 (61%), Gaps = 11/192 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
N++IKNLD I + + FS+FG I+S +++D+ G SKG+ FV++E + A K++E +
Sbjct: 192 NLYIKNLDSDITEALLQEKFSSFGKIISLAISKDDNGLSKGFAFVNYENPDDAKKAMEAM 251
Query: 172 NGMLLNSKIVFVGKFIPRKERE----KELGEKAK------LFTNVYIKNFGEDFNDEKLK 221
NG+ SK ++V + + ERE ++ EK K +N+Y+KN +D D++L+
Sbjct: 252 NGLQFGSKYLYVARAQKKAEREQILHRQFEEKRKEQILKYQASNLYVKNIDDDVTDKELR 311
Query: 222 EMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
++F GTITS +VM +D G S+GFGFV + +PE A KAV ++NG K LY+ AQ+
Sbjct: 312 DLFSSCGTITSVKVMRDDKGISKGFGFVCFSNPEEANKAVMSFNGCTFHRKPLYIAIAQR 371
Query: 281 KAERTQELKRRF 292
K ER +L +
Sbjct: 372 KKERKTQLNLHY 383
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 74/236 (31%), Positives = 124/236 (52%), Gaps = 24/236 (10%)
Query: 103 PSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETE 161
P+ + ++++ +L + ++ F FGSI S +V +D NS YG+V+F ++
Sbjct: 4 PATVAAVPASIYVGDLHPDVQEHHLFAAFVEFGSIASVRVCRDRVTMNSLCYGYVNFRSQ 63
Query: 162 EAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLK 221
+ A ++I+ N LN K++ V ++ R ++ G NV++KN ++ L
Sbjct: 64 QDAIRAIKLRNNSYLNGKVIRV-MWLHRDPNARKSGR-----GNVFVKNLAGSIDNAGLH 117
Query: 222 EMFEPYGTITSYR-VMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
++F+ YG I S + VM+ DGKS+G+GFV +E E A A++ NG V K +YVG+ +
Sbjct: 118 DLFKKYGNILSSKVVMSEDGKSKGYGFVQFEWEESANNAIEKLNGSTVGNKQIYVGKFVR 177
Query: 281 KAERTQELKRRFEMLKIERLNRYQG--VNLYVKNLDDSIDDERLRKEFTPFGTITS 334
K +R L Y NLY+KNLD I + L+++F+ FG I S
Sbjct: 178 KGDRI--------------LPGYDAKYTNLYIKNLDSDITEALLQEKFSSFGKIIS 219
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 59/97 (60%)
Query: 100 QRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFE 159
+R + K N+++KN+D + +K + D FS+ G+I S KV +D++G SKG+GFV F
Sbjct: 283 KRKEQILKYQASNLYVKNIDDDVTDKELRDLFSSCGTITSVKVMRDDKGISKGFGFVCFS 342
Query: 160 TEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKEL 196
E ANK++ NG + K +++ +KER+ +L
Sbjct: 343 NPEEANKAVMSFNGCTFHRKPLYIAIAQRKKERKTQL 379
>gi|22329932|ref|NP_174676.2| poly(A) binding protein 1 [Arabidopsis thaliana]
gi|332193555|gb|AEE31676.1| poly(A) binding protein 1 [Arabidopsis thaliana]
Length = 407
Score = 246 bits (628), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 130/258 (50%), Positives = 179/258 (69%), Gaps = 7/258 (2%)
Query: 81 LDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSC 140
++ +N+ LKG+P+RIM+S+RDPS R SG GNVF+KNLD+SIDNK + D FSAFG +LSC
Sbjct: 1 MEVLNYCKLKGKPMRIMFSERDPSNRMSGRGNVFVKNLDESIDNKQLCDMFSAFGKVLSC 60
Query: 141 KVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKA 200
KVA+D G SKGYGFV F ++ + + NG L+ ++ + V F+ R + +K+
Sbjct: 61 KVARDASGVSKGYGFVQFYSDLSVYTACNFHNGTLIRNQHIHVCPFVSRGQ-----WDKS 115
Query: 201 KLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGKSRGFGFVAYESPEFAEKA 259
++FTNVY+KN E D LK +F +G ITS VM + +GKSR FGFV +E E A A
Sbjct: 116 RVFTNVYVKNLVETATDADLKRLFGEFGEITSAVVMKDGEGKSRRFGFVNFEKAEAAVTA 175
Query: 260 VQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIER-LNRYQGVNLYVKNLDDSID 318
++ NG VD K L+VGRAQ+K RT++LK +FE+ KI R + +G+NLYVKNLDDS+D
Sbjct: 176 IEKMNGVVVDEKELHVGRAQRKTNRTEDLKAKFELEKIIRDMKTRKGMNLYVKNLDDSVD 235
Query: 319 DERLRKEFTPFGTITSAK 336
+ +L + F+ FGTITS K
Sbjct: 236 NTKLEELFSEFGTITSCK 253
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 71/193 (36%), Positives = 114/193 (59%), Gaps = 12/193 (6%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV++KNL ++ + + F FG I S V +D +G S+ +GFV+FE EAA +IEK+
Sbjct: 120 NVYVKNLVETATDADLKRLFGEFGEITSAVVMKDGEGKSRRFGFVNFEKAEAAVTAIEKM 179
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKL-----------FTNVYIKNFGEDFNDEKL 220
NG++++ K + VG+ + R ++L K +L N+Y+KN + ++ KL
Sbjct: 180 NGVVVDEKELHVGRAQRKTNRTEDLKAKFELEKIIRDMKTRKGMNLYVKNLDDSVDNTKL 239
Query: 221 KEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQ 279
+E+F +GTITS +VM +++G S+G GFV + + E A KA+ NGK V K +YV AQ
Sbjct: 240 EELFSEFGTITSCKVMVHSNGISKGVGFVEFSTSEEASKAMLKMNGKMVGNKPIYVSLAQ 299
Query: 280 KKAERTQELKRRF 292
K + L+ +F
Sbjct: 300 CKEQHKLHLQTQF 312
>gi|397575959|gb|EJK49989.1| hypothetical protein THAOC_31088, partial [Thalassiosira oceanica]
Length = 690
Score = 245 bits (626), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 144/323 (44%), Positives = 195/323 (60%), Gaps = 68/323 (21%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D ERALD+MNF +KG+P RIMWSQRDPS+R+SGVGN+F+KNL + IDNK +YDTFS FG
Sbjct: 66 DAERALDSMNFTDIKGKPCRIMWSQRDPSVRRSGVGNIFVKNLHEGIDNKQLYDTFSLFG 125
Query: 136 SILSCKVAQD-EQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREK 194
+ILSCKV D E G SKGYG+VH+ET EAA +I+K++GML++ K V VG F+ R R
Sbjct: 126 NILSCKVVCDRETGLSKGYGYVHYETNEAAASAIDKLDGMLIDGKEVQVGVFMRRDTRPD 185
Query: 195 ELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRV------------------- 235
+ +++TN++IKN +++D++L+ F +G I S V
Sbjct: 186 Q-----EVYTNLFIKNMPYEWDDKRLEAEFAEFGEIVSASVKMGKRKKFAKKGKKAEAKK 240
Query: 236 ---------------------------------MNNDGKSRGFGFVAYESPEFAEKAVQA 262
+ + +S GFGFV + + E A AV+A
Sbjct: 241 DEDDKEDGAEDKPAEEEKPEEEEAKPAEEEAKPESTEPESLGFGFVNFATHEAAAAAVEA 300
Query: 263 WN---------GKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNL 313
N G EV+ K L+VGRAQKK+ER EL+ ++E K+ER+ ++QGVNLYVKNL
Sbjct: 301 MNDKVYKVTEDGDEVE-KALFVGRAQKKSERQAELRSKYEAEKMERIAKFQGVNLYVKNL 359
Query: 314 DDSIDDERLRKEFTPFGTITSAK 336
DD++ D+ LR EF GTITSAK
Sbjct: 360 DDAVTDDMLRDEFGGMGTITSAK 382
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 113/229 (49%), Gaps = 26/229 (11%)
Query: 111 GNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSIE 169
++++ +L ++ +Y+ F+A G + S +V +D S GY +V++ A ++++
Sbjct: 13 ASLYVGDLLPEVNEGLLYEIFNAVGPVASIRVCRDAVTRRSLGYAYVNYHQAADAERALD 72
Query: 170 KVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGT 229
+N + K + +++ + N+++KN E ++++L + F +G
Sbjct: 73 SMNFTDIKGKPCRI------MWSQRDPSVRRSGVGNIFVKNLHEGIDNKQLYDTFSLFGN 126
Query: 230 ITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERT-Q 286
I S +V+ + G S+G+G+V YE+ E A A+ +G +DGK + VG ++ R Q
Sbjct: 127 ILSCKVVCDRETGLSKGYGYVHYETNEAAASAIDKLDGMLIDGKEVQVGVFMRRDTRPDQ 186
Query: 287 ELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSA 335
E+ NL++KN+ DD+RL EF FG I SA
Sbjct: 187 EVY----------------TNLFIKNMPYEWDDKRLEAEFAEFGEIVSA 219
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 128/282 (45%), Gaps = 72/282 (25%)
Query: 80 ALDTMNFDALKGRPIRI-MWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSIL 138
A+D ++ + G+ +++ ++ +RD + N+FIKN+ D+K + F+ FG I+
Sbjct: 158 AIDKLDGMLIDGKEVQVGVFMRRDTRPDQEVYTNLFIKNMPYEWDDKRLEAEFAEFGEIV 217
Query: 139 SCKV---------------------------AQDE------------------------Q 147
S V A+D+ +
Sbjct: 218 SASVKMGKRKKFAKKGKKAEAKKDEDDKEDGAEDKPAEEEKPEEEEAKPAEEEAKPESTE 277
Query: 148 GNSKGYGFVHFETEEAANKSIEKVNGMLLN--------SKIVFVGKFIPRKEREKELGEK 199
S G+GFV+F T EAA ++E +N + K +FVG+ + ER+ EL K
Sbjct: 278 PESLGFGFVNFATHEAAAAAVEAMNDKVYKVTEDGDEVEKALFVGRAQKKSERQAELRSK 337
Query: 200 ---------AKL-FTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGF 247
AK N+Y+KN + D+ L++ F GTITS ++M + SRGFGF
Sbjct: 338 YEAEKMERIAKFQGVNLYVKNLDDAVTDDMLRDEFGGMGTITSAKIMRDAKTNNSRGFGF 397
Query: 248 VAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELK 289
V + +PE A +AV +GK V GK +YV AQ++ R +L+
Sbjct: 398 VCFSTPEDATRAVNEMSGKIVAGKPIYVSLAQRREVRRAQLE 439
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 64/136 (47%), Gaps = 20/136 (14%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQ 261
++Y+ + + N+ L E+F G + S RV + +S G+ +V Y AE+A+
Sbjct: 13 ASLYVGDLLPEVNEGLLYEIFNAVGPVASIRVCRDAVTRRSLGYAYVNYHQAADAERALD 72
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGV-NLYVKNLDDSIDDE 320
+ N ++ GK + +Q+ R GV N++VKNL + ID++
Sbjct: 73 SMNFTDIKGKPCRIMWSQRDPSV-----------------RRSGVGNIFVKNLHEGIDNK 115
Query: 321 RLRKEFTPFGTITSAK 336
+L F+ FG I S K
Sbjct: 116 QLYDTFSLFGNILSCK 131
>gi|449440159|ref|XP_004137852.1| PREDICTED: probable polyadenylate-binding protein At2g36660-like
[Cucumis sativus]
gi|449521207|ref|XP_004167621.1| PREDICTED: probable polyadenylate-binding protein At2g36660-like
[Cucumis sativus]
Length = 640
Score = 244 bits (623), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 118/262 (45%), Positives = 178/262 (67%), Gaps = 3/262 (1%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D A++ MN L GR IR+MWS+RD RKSG+GNVF+KNL SI++ + + F FG
Sbjct: 67 DATNAIEVMNHSMLNGRAIRVMWSRRDADARKSGIGNVFVKNLSDSINSLGLQELFKKFG 126
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
++LS KVA + G SKGYGFV FE+EE+AN +IE +NG + K ++VGKF+ + +R
Sbjct: 127 NVLSSKVATSDDGKSKGYGFVQFESEESANAAIESLNGFTVGDKQIYVGKFVRKSDR--V 184
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPE 254
L +TN+Y+KN + +E L+E F +G I+S + ++ G SRGFGF+ +E+ +
Sbjct: 185 LANPDIKYTNLYVKNLDPEIGEEHLQEKFSEFGKISSMIISRDENGVSRGFGFINFENSD 244
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A++A++ NG ++ K++Y+ RAQKK ER + L+R +E E++ +Y+G N+YVKN+D
Sbjct: 245 DAKRALETLNGSQLGSKVIYIARAQKKTEREEVLRRHYEEKCKEQVLKYKGSNVYVKNID 304
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
D + DE LR+ F+ FGTITS+K
Sbjct: 305 DDVTDEELRERFSQFGTITSSK 326
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 75/192 (39%), Positives = 121/192 (63%), Gaps = 11/192 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
N+++KNLD I + + + FS FG I S +++DE G S+G+GF++FE + A +++E +
Sbjct: 194 NLYVKNLDPEIGEEHLQEKFSEFGKISSMIISRDENGVSRGFGFINFENSDDAKRALETL 253
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELG----EKAK------LFTNVYIKNFGEDFNDEKLK 221
NG L SK++++ + + ERE+ L EK K +NVY+KN +D DE+L+
Sbjct: 254 NGSQLGSKVIYIARAQKKTEREEVLRRHYEEKCKEQVLKYKGSNVYVKNIDDDVTDEELR 313
Query: 222 EMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
E F +GTITS ++M +D G ++GFGFV + +P+ A++AV G GK LY+ AQ+
Sbjct: 314 ERFSQFGTITSSKLMRDDKGINKGFGFVCFSNPDEAKRAVNTLQGCMFHGKPLYLAIAQR 373
Query: 281 KAERTQELKRRF 292
K +R +LK +F
Sbjct: 374 KEDRQMQLKLQF 385
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 128/226 (56%), Gaps = 20/226 (8%)
Query: 111 GNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQ-GNSKGYGFVHFETEEAANKSIE 169
++++ +L + + ++D FS F S+ S ++ +D G S YG+V+F + + A +IE
Sbjct: 14 ASLYVGDLHPDVTDGQLFDAFSGFKSLASVRICRDSSTGRSLSYGYVNFISPQDATNAIE 73
Query: 170 KVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGT 229
+N +LN + + V ++ + NV++KN + N L+E+F+ +G
Sbjct: 74 VMNHSMLNGRAIRV------MWSRRDADARKSGIGNVFVKNLSDSINSLGLQELFKKFGN 127
Query: 230 ITSYRV-MNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
+ S +V ++DGKS+G+GFV +ES E A A+++ NG V K +YVG+ +K++R
Sbjct: 128 VLSSKVATSDDGKSKGYGFVQFESEESANAAIESLNGFTVGDKQIYVGKFVRKSDR---- 183
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITS 334
+L + +Y NLYVKNLD I +E L+++F+ FG I+S
Sbjct: 184 -----VLANPDI-KY--TNLYVKNLDPEIGEEHLQEKFSEFGKISS 221
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 75/137 (54%), Gaps = 16/137 (11%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQ----RDPSLR------------KSGVGNVFIKNLD 119
D +RAL+T+N L + I I +Q R+ LR K NV++KN+D
Sbjct: 245 DAKRALETLNGSQLGSKVIYIARAQKKTEREEVLRRHYEEKCKEQVLKYKGSNVYVKNID 304
Query: 120 KSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSK 179
+ ++ + + FS FG+I S K+ +D++G +KG+GFV F + A +++ + G + + K
Sbjct: 305 DDVTDEELRERFSQFGTITSSKLMRDDKGINKGFGFVCFSNPDEAKRAVNTLQGCMFHGK 364
Query: 180 IVFVGKFIPRKEREKEL 196
+++ +++R+ +L
Sbjct: 365 PLYLAIAQRKEDRQMQL 381
>gi|340546033|gb|AEK51815.1| cytoplasmic poly(A) binding protein 1 [Ichthyophis bannanicus]
Length = 177
Score = 244 bits (623), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 121/178 (67%), Positives = 147/178 (82%), Gaps = 2/178 (1%)
Query: 116 KNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGML 175
KNLDKSIDNKA+YDTFSAFG+ILSCKV DE G SKGY FVHFET++AA+++IEK+NGML
Sbjct: 1 KNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQDAADRAIEKMNGML 59
Query: 176 LNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRV 235
LN + VFVG+F RKERE ELG +AK FTNVYIKNFG+D +DE+LKEMF YG S +V
Sbjct: 60 LNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGDDMDDERLKEMFSKYGKTLSVKV 119
Query: 236 MNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRF 292
M + GKS+GFGFV++E E A KAV+ NGK+V+GK+++VGRAQKK ER ELKR+F
Sbjct: 120 MTDSTGKSKGFGFVSFEKHEDANKAVEEMNGKDVNGKMVFVGRAQKKVERQAELKRKF 177
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/179 (35%), Positives = 90/179 (50%), Gaps = 18/179 (10%)
Query: 36 RSLSSLIDGNTVKYDWDSGY--------TCHQLGS-GAILVQLGQPYMLDTERALDTMNF 86
++L ID N YD S + C + GS G V D RA++ MN
Sbjct: 1 KNLDKSID-NKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQDAAD--RAIEKMNG 57
Query: 87 DALKGRPIRI----MWSQRDPSL--RKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSC 140
L R + + +R+ L R NV+IKN +D++ + + FS +G LS
Sbjct: 58 MLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGDDMDDERLKEMFSKYGKTLSV 117
Query: 141 KVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEK 199
KV D G SKG+GFV FE E ANK++E++NG +N K+VFVG+ + ER+ EL K
Sbjct: 118 KVMTDSTGKSKGFGFVSFEKHEDANKAVEEMNGKDVNGKMVFVGRAQKKVERQAELKRK 176
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 73/128 (57%), Gaps = 10/128 (7%)
Query: 209 KNFGEDFNDEKLKEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEV 268
KN + +++ L + F +G I S +V+ ++ S+G+ FV +E+ + A++A++ NG +
Sbjct: 1 KNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHFETQDAADRAIEKMNGMLL 60
Query: 269 DGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTP 328
+ + ++VGR + + ER EL R + N+Y+KN D +DDERL++ F+
Sbjct: 61 NDRKVFVGRFKSRKEREAELGARAKEF----------TNVYIKNFGDDMDDERLKEMFSK 110
Query: 329 FGTITSAK 336
+G S K
Sbjct: 111 YGKTLSVK 118
>gi|297851860|ref|XP_002893811.1| PAB1 binding protein 1 [Arabidopsis lyrata subsp. lyrata]
gi|297339653|gb|EFH70070.1| PAB1 binding protein 1 [Arabidopsis lyrata subsp. lyrata]
Length = 403
Score = 244 bits (622), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 129/258 (50%), Positives = 178/258 (68%), Gaps = 7/258 (2%)
Query: 81 LDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSC 140
++ +NF LKG+P+RIM+S+RDPS R SG GNVF+KNLD+SIDNK + D FSAFG +LSC
Sbjct: 1 MEMLNFYKLKGKPMRIMFSERDPSKRLSGRGNVFVKNLDESIDNKQLSDMFSAFGKVLSC 60
Query: 141 KVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKA 200
KV +D G SKGYGFV F +E + N + NG L+ ++ + V F+ R++ +++
Sbjct: 61 KVVRDASGVSKGYGFVQFYSELSVNIACNVRNGTLIRNQHIHVSPFVSRRQ-----WDES 115
Query: 201 KLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPEFAEKA 259
++FTNVY+KN E D+ LK +FE +G ITS VM + +GKSR FGFV +E E A A
Sbjct: 116 RVFTNVYVKNLAETTTDDDLKMIFEEFGEITSAVVMKDKEGKSRMFGFVNFEKAEAAVTA 175
Query: 260 VQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIER-LNRYQGVNLYVKNLDDSID 318
+ NG VD K L+VGRAQ+K R Q+LK F++ KI+R + +G NLYVKNLD S+D
Sbjct: 176 IDKMNGTIVDEKELHVGRAQRKKNRIQDLKVIFKLEKIKRDMKTRKGTNLYVKNLDYSVD 235
Query: 319 DERLRKEFTPFGTITSAK 336
+ +L++ F+ FGTI S K
Sbjct: 236 NTKLQELFSEFGTIISCK 253
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 72/196 (36%), Positives = 111/196 (56%), Gaps = 12/196 (6%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV++KNL ++ + + F FG I S V +D++G S+ +GFV+FE EAA +I+K+
Sbjct: 120 NVYVKNLAETTTDDDLKMIFEEFGEITSAVVMKDKEGKSRMFGFVNFEKAEAAVTAIDKM 179
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKL-----------FTNVYIKNFGEDFNDEKL 220
NG +++ K + VG+ +K R ++L KL TN+Y+KN ++ KL
Sbjct: 180 NGTIVDEKELHVGRAQRKKNRIQDLKVIFKLEKIKRDMKTRKGTNLYVKNLDYSVDNTKL 239
Query: 221 KEMFEPYGTITSYRVMNNDGK-SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQ 279
+E+F +GTI S +VM + + S+G GFV + + E A KA+ NGK V K +YV AQ
Sbjct: 240 QELFSEFGTIISCKVMVHPNRISKGVGFVEFSTSEEASKAMLKMNGKVVGNKPIYVSLAQ 299
Query: 280 KKAERTQELKRRFEML 295
K E L +F L
Sbjct: 300 CKEEHKLHLHTQFNNL 315
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 55/85 (64%), Gaps = 2/85 (2%)
Query: 100 QRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFE 159
+RD RK N+++KNLD S+DN + + FS FG+I+SCKV SKG GFV F
Sbjct: 214 KRDMKTRKGT--NLYVKNLDYSVDNTKLQELFSEFGTIISCKVMVHPNRISKGVGFVEFS 271
Query: 160 TEEAANKSIEKVNGMLLNSKIVFVG 184
T E A+K++ K+NG ++ +K ++V
Sbjct: 272 TSEEASKAMLKMNGKVVGNKPIYVS 296
>gi|356537017|ref|XP_003537028.1| PREDICTED: probable polyadenylate-binding protein At2g36660-like
[Glycine max]
Length = 502
Score = 244 bits (622), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 132/262 (50%), Positives = 172/262 (65%), Gaps = 3/262 (1%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D RA+ N L G+ IR+MWS DPS RKSG GNVF+KNL SIDN ++D F +G
Sbjct: 65 DAIRAMKLKNNSYLNGKVIRVMWSHPDPSARKSGRGNVFVKNLAGSIDNAGLHDLFQKYG 124
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILS KV G SKGYGFV FE+EE+AN +IEK+NG + K ++VGKF+ + +R
Sbjct: 125 NILSSKVVMSGDGKSKGYGFVQFESEESANNAIEKLNGSTVGDKQIYVGKFVRKGDRILP 184
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPE 254
G AK +TN+YIKN D + L+E F +G I S + +D G S+GF FV YE+P+
Sbjct: 185 -GYDAK-YTNLYIKNLDSDITEALLQEKFSSFGKIISLVISKDDNGLSKGFAFVNYENPD 242
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A KA++A NG + K LYV RAQKKAER Q L R+FE + E++ +YQ NLYVKN+D
Sbjct: 243 DARKAMEAMNGLKFGSKNLYVARAQKKAEREQILHRQFEEKRKEQILKYQASNLYVKNID 302
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
D + D+ LR F+ GTITS K
Sbjct: 303 DDVTDKELRDLFSSCGTITSVK 324
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 74/192 (38%), Positives = 120/192 (62%), Gaps = 11/192 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
N++IKNLD I + + FS+FG I+S +++D+ G SKG+ FV++E + A K++E +
Sbjct: 192 NLYIKNLDSDITEALLQEKFSSFGKIISLVISKDDNGLSKGFAFVNYENPDDARKAMEAM 251
Query: 172 NGMLLNSKIVFVGKFIPRKERE----KELGEKAK------LFTNVYIKNFGEDFNDEKLK 221
NG+ SK ++V + + ERE ++ EK K +N+Y+KN +D D++L+
Sbjct: 252 NGLKFGSKNLYVARAQKKAEREQILHRQFEEKRKEQILKYQASNLYVKNIDDDVTDKELR 311
Query: 222 EMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
++F GTITS +VM +D G S+GFGFV + +PE A KAV+++NG K LY+ AQ+
Sbjct: 312 DLFSSCGTITSVKVMRDDKGISKGFGFVCFSNPEEANKAVRSFNGCMFHRKPLYIAIAQR 371
Query: 281 KAERTQELKRRF 292
K +R +L +
Sbjct: 372 KMDRKTQLNLHY 383
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 124/236 (52%), Gaps = 24/236 (10%)
Query: 103 PSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETE 161
P+ + ++++ +L + + +++ F+ F ++ S +V +D S YG+V+F+++
Sbjct: 4 PATVAAVPASLYVGDLHSEVVDHHLFEAFAEFKTMDSVRVCRDRVTMKSLCYGYVNFKSQ 63
Query: 162 EAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLK 221
+ A ++++ N LN K++ V P K G NV++KN ++ L
Sbjct: 64 QDAIRAMKLKNNSYLNGKVIRVMWSHPDPSARKS-GR-----GNVFVKNLAGSIDNAGLH 117
Query: 222 EMFEPYGTITSYR-VMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
++F+ YG I S + VM+ DGKS+G+GFV +ES E A A++ NG V K +YVG+ +
Sbjct: 118 DLFQKYGNILSSKVVMSGDGKSKGYGFVQFESEESANNAIEKLNGSTVGDKQIYVGKFVR 177
Query: 281 KAERTQELKRRFEMLKIERLNRYQG--VNLYVKNLDDSIDDERLRKEFTPFGTITS 334
K +R L Y NLY+KNLD I + L+++F+ FG I S
Sbjct: 178 KGDRI--------------LPGYDAKYTNLYIKNLDSDITEALLQEKFSSFGKIIS 219
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 59/97 (60%)
Query: 100 QRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFE 159
+R + K N+++KN+D + +K + D FS+ G+I S KV +D++G SKG+GFV F
Sbjct: 283 KRKEQILKYQASNLYVKNIDDDVTDKELRDLFSSCGTITSVKVMRDDKGISKGFGFVCFS 342
Query: 160 TEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKEL 196
E ANK++ NG + + K +++ + +R+ +L
Sbjct: 343 NPEEANKAVRSFNGCMFHRKPLYIAIAQRKMDRKTQL 379
>gi|340546029|gb|AEK51813.1| cytoplasmic poly(A) binding protein 1 [Alligator mississippiensis]
gi|402697275|gb|AFQ90825.1| polyA-binding protein cytoplasmic 1, partial [Anniella pulchra]
gi|402697277|gb|AFQ90826.1| polyA-binding protein cytoplasmic 1, partial [Chelydra serpentina]
gi|402697281|gb|AFQ90828.1| polyA-binding protein cytoplasmic 1, partial [Cyrtodactylus sp.
JJF-2012]
gi|402697287|gb|AFQ90831.1| polyA-binding protein cytoplasmic 1, partial [Draco beccarii]
gi|402697289|gb|AFQ90832.1| polyA-binding protein cytoplasmic 1, partial [Draco sumatranus]
Length = 177
Score = 243 bits (621), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 123/178 (69%), Positives = 147/178 (82%), Gaps = 2/178 (1%)
Query: 116 KNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGML 175
KNLDKSIDNKA+YDTFSAFG+ILSCKV DE G SKGYGFVHFET+EAA ++IEK+NGML
Sbjct: 1 KNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGML 59
Query: 176 LNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRV 235
LN + VFVG+F RKERE ELG +AK FTNVYIKNFGED +DE+LKE+F +G S +V
Sbjct: 60 LNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKELFGKFGPALSVKV 119
Query: 236 MNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRF 292
M ++ GKS+GFGFV++E E A+KAV NGKE++GK +YVGRAQKK ER ELKR+F
Sbjct: 120 MTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKRKF 177
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 49/129 (37%), Positives = 73/129 (56%), Gaps = 6/129 (4%)
Query: 77 TERALDTMNFDALKGRPIRI----MWSQRDPSL--RKSGVGNVFIKNLDKSIDNKAMYDT 130
ERA++ MN L R + + +R+ L R NV+IKN + +D++ + +
Sbjct: 48 AERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKEL 107
Query: 131 FSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRK 190
F FG LS KV DE G SKG+GFV FE E A K+++++NG LN K ++VG+ +
Sbjct: 108 FGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKV 167
Query: 191 EREKELGEK 199
ER+ EL K
Sbjct: 168 ERQTELKRK 176
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 73/128 (57%), Gaps = 10/128 (7%)
Query: 209 KNFGEDFNDEKLKEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEV 268
KN + +++ L + F +G I S +V+ ++ S+G+GFV +E+ E AE+A++ NG +
Sbjct: 1 KNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNGMLL 60
Query: 269 DGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTP 328
+ + ++VGR + + ER EL R + N+Y+KN + +DDERL++ F
Sbjct: 61 NDRKVFVGRFKSRKEREAELGARAKEF----------TNVYIKNFGEDMDDERLKELFGK 110
Query: 329 FGTITSAK 336
FG S K
Sbjct: 111 FGPALSVK 118
>gi|403221305|dbj|BAM39438.1| polyadenylate-binding protein [Theileria orientalis strain
Shintoku]
Length = 656
Score = 243 bits (621), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 125/263 (47%), Positives = 175/263 (66%), Gaps = 8/263 (3%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D E AL+ +N+ +KG P RIMWS RDPSLRKSG GN+F+KNLDKSID K++YDTF+ FG
Sbjct: 80 DAEAALENLNYIEIKGHPTRIMWSNRDPSLRKSGAGNIFVKNLDKSIDTKSLYDTFAHFG 139
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCKVA D G S+ YGFVH+E+EE+A ++IEKVNGML+ K V V F+ +++RE E
Sbjct: 140 TILSCKVAVDSTGASRRYGFVHYESEESAREAIEKVNGMLIGGKKVEVAPFLRKQDRETE 199
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEF 255
+++TN+Y++NF D+++E L++ E YG ITS ++ D K R F FV Y+
Sbjct: 200 -----EVYTNLYVRNFPADWDEEALRQFLEKYGEITSM-MLKEDSKGRRFAFVNYKEASV 253
Query: 256 AEKAVQAWNGKEVD--GKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNL 313
A++ V N +++ L V Q K +R LK +F + + ++ NLY+KNL
Sbjct: 254 AKEVVTTLNDLKLEEASDPLLVCPHQDKVKRQNMLKAQFSTVSPGQDDKRLTSNLYIKNL 313
Query: 314 DDSIDDERLRKEFTPFGTITSAK 336
DD+ DD L + F FGTITS+K
Sbjct: 314 DDTFDDASLGELFKQFGTITSSK 336
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 106/193 (54%), Gaps = 15/193 (7%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
N++++N D +A+ +G I S + +D +G + + FV+++ A + + +
Sbjct: 204 NLYVRNFPADWDEEALRQFLEKYGEITSMMLKEDSKG--RRFAFVNYKEASVAKEVVTTL 261
Query: 172 NGMLLN--SKIVFVGKFIPRKEREKEL----------GEKAKLFTNVYIKNFGEDFNDEK 219
N + L S + V + +R+ L + +L +N+YIKN + F+D
Sbjct: 262 NDLKLEEASDPLLVCPHQDKVKRQNMLKAQFSTVSPGQDDKRLTSNLYIKNLDDTFDDAS 321
Query: 220 LKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRA 278
L E+F+ +GTITS +VM + + SRGFGFV + +P+ A KA+ A + K V GK LYVG A
Sbjct: 322 LGELFKQFGTITSSKVMLDANNNSRGFGFVCFSNPQEATKAIAAMHLKLVKGKPLYVGLA 381
Query: 279 QKKAERTQELKRR 291
+K+ +R +++R
Sbjct: 382 EKRDQRLMRMQQR 394
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 66/150 (44%), Gaps = 28/150 (18%)
Query: 192 REKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND--GKSRGFGFVA 249
RE ++ A L Y+ + D + L E+F G + S RV + KS G+ +V
Sbjct: 19 REGQVFSSASL----YVGDLQPDVTEAVLYEVFNTIGPVASIRVCRDSVTRKSLGYAYVN 74
Query: 250 YESPEFAEKAVQAWNGKEVDG---KILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGV 306
Y S + AE A++ N E+ G +I++ R L +
Sbjct: 75 YYSTQDAEAALENLNYIEIKGHPTRIMWSNRDPS-------------------LRKSGAG 115
Query: 307 NLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
N++VKNLD SID + L F FGTI S K
Sbjct: 116 NIFVKNLDKSIDTKSLYDTFAHFGTILSCK 145
>gi|357117760|ref|XP_003560630.1| PREDICTED: LOW QUALITY PROTEIN: polyadenylate-binding protein
5-like [Brachypodium distachyon]
Length = 654
Score = 243 bits (621), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 130/264 (49%), Positives = 179/264 (67%), Gaps = 5/264 (1%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D + AL+ NF + G+ IR+M+S RDP+LR+SG N+FIKNL+ +I K+++ FS FG
Sbjct: 84 DAKVALEYFNFTVVNGKSIRVMFSNRDPTLRRSGAANLFIKNLEPNIVAKSLHQMFSRFG 143
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLL--NSKIVFVGKFIPRKERE 193
ILSCKVA D G SKGYGFV F +EE+A ++ +NG L N K ++V FI R+ER+
Sbjct: 144 IILSCKVATDLNGKSKGYGFVQFVSEESAKDAMNALNGKLANGNGKQLYVDLFIRREERQ 203
Query: 194 KELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYES 252
+G +K FTNVY KN ++F D+ L +F P+GTITS VM + DG+S+ FGFV YE
Sbjct: 204 -HIGGASK-FTNVYTKNLPKEFTDDDLCRVFAPFGTITSAVVMKDGDGESKCFGFVNYEK 261
Query: 253 PEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKN 312
E+AE+AV+ NGK + LYVGRA++K ER ELK +F+ + +++ + +G NLY+KN
Sbjct: 262 TEYAEEAVEKLNGKIISDVALYVGRAKRKQERQAELKEKFDKERNDKIRKSKGCNLYLKN 321
Query: 313 LDDSIDDERLRKEFTPFGTITSAK 336
LD SIDDE LR F F I + K
Sbjct: 322 LDCSIDDEYLRNLFGRFDDIGTCK 345
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 70/193 (36%), Positives = 114/193 (59%), Gaps = 12/193 (6%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV+ KNL K + + F+ FG+I S V +D G SK +GFV++E E A +++EK+
Sbjct: 213 NVYTKNLPKEFTDDDLCRVFAPFGTITSAVVMKDGDGESKCFGFVNYEKTEYAEEAVEKL 272
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEK----------AKLFTNVYIKNFGEDFNDEKLK 221
NG +++ ++VG+ ++ER+ EL EK N+Y+KN +DE L+
Sbjct: 273 NGKIISDVALYVGRAKRKQERQAELKEKFDKERNDKIRKSKGCNLYLKNLDCSIDDEYLR 332
Query: 222 EMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDG-KILYVGRAQ 279
+F + I + +VM +++G+S+GFGFV + + E A KAV N +++ G K+LYV AQ
Sbjct: 333 NLFGRFDDIGTCKVMVDSEGRSKGFGFVLFTTIEAANKAVSXRNERKLVGTKLLYVCVAQ 392
Query: 280 KKAERTQELKRRF 292
+K ER+ L +F
Sbjct: 393 RKEERSAILAAQF 405
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 83/261 (31%), Positives = 129/261 (49%), Gaps = 29/261 (11%)
Query: 84 MNFDALKGRPIRIMWSQRDPSLRKSGVG-----NVFIKNLDKSIDNKAMYDTFSAFGSIL 138
M F A RP + + P L G +V++ NL+ S+ + + D FS ++
Sbjct: 1 MAFPATLFRPA--VMTPFGPPLYIPGPSFGSSVSVYVGNLEASVTEQQLLDLFSQAVPVV 58
Query: 139 SCKVAQDE-QGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELG 197
S ++ D+ G S GY +V+F + E A ++E N ++N K + V F R + G
Sbjct: 59 SVRICDDKVTGRSLGYAYVNFHSHEDAKVALEYFNFTVVNGKSIRV-MFSNRDPTLRRSG 117
Query: 198 EKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGKSRGFGFVAYESPEFA 256
N++IKN + + L +MF +G I S +V + +GKS+G+GFV + S E A
Sbjct: 118 A-----ANLFIKNLEPNIVAKSLHQMFSRFGIILSCKVATDLNGKSKGYGFVQFVSEESA 172
Query: 257 EKAVQAWNGKEV--DGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
+ A+ A NGK +GK LYV ++ ER I +++ N+Y KNL
Sbjct: 173 KDAMNALNGKLANGNGKQLYVDLFIRREERQH----------IGGASKF--TNVYTKNLP 220
Query: 315 DSIDDERLRKEFTPFGTITSA 335
D+ L + F PFGTITSA
Sbjct: 221 KEFTDDDLCRVFAPFGTITSA 241
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 63/101 (62%), Gaps = 1/101 (0%)
Query: 100 QRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFE 159
+R+ +RKS N+++KNLD SID++ + + F F I +CKV D +G SKG+GFV F
Sbjct: 304 ERNDKIRKSKGCNLYLKNLDCSIDDEYLRNLFGRFDDIGTCKVMVDSEGRSKGFGFVLFT 363
Query: 160 TEEAANKSIEKVNGM-LLNSKIVFVGKFIPRKEREKELGEK 199
T EAANK++ N L+ +K+++V ++ER L +
Sbjct: 364 TIEAANKAVSXRNERKLVGTKLLYVCVAQRKEERSAILAAQ 404
>gi|402590718|gb|EJW84648.1| polyadenylate-binding protein 4, partial [Wuchereria bancrofti]
Length = 519
Score = 243 bits (620), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 122/198 (61%), Positives = 154/198 (77%), Gaps = 3/198 (1%)
Query: 142 VAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAK 201
VA DE+ NSKGYGFVHFETEE+A K+IEKVNGMLL K V+VGKF PR R +E+GE A+
Sbjct: 1 VANDEESNSKGYGFVHFETEESAQKAIEKVNGMLLEGKKVYVGKFQPRTARLREMGETAR 60
Query: 202 LFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPEFAEKAV 260
FTNVYIKNF ++ + E L+++F +G ITS VM + DGKS+GFGFVA+E+PE AEKAV
Sbjct: 61 RFTNVYIKNFADELDKEALEKLFSKFGKITSAAVMVDADGKSKGFGFVAFENPEDAEKAV 120
Query: 261 QAWNGKEVDG--KILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSID 318
+ E+ G + LYV RAQKK ER+ ELKRR+E K+ER+ RYQGVNLYVKNLDD+++
Sbjct: 121 TEMHEYELPGTERKLYVCRAQKKNERSAELKRRYEQQKVERMQRYQGVNLYVKNLDDTVN 180
Query: 319 DERLRKEFTPFGTITSAK 336
D+ L++ F +G ITSAK
Sbjct: 181 DDILKQNFEAYGKITSAK 198
Score = 130 bits (327), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 85/236 (36%), Positives = 131/236 (55%), Gaps = 19/236 (8%)
Query: 76 DTERALDTMNFDALKGRPIRI-MWSQRDPSLRKSG-----VGNVFIKNLDKSIDNKAMYD 129
++A++ +N L+G+ + + + R LR+ G NV+IKN +D +A+
Sbjct: 22 SAQKAIEKVNGMLLEGKKVYVGKFQPRTARLREMGETARRFTNVYIKNFADELDKEALEK 81
Query: 130 TFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLL--NSKIVFVGKFI 187
FS FG I S V D G SKG+GFV FE E A K++ +++ L + ++V +
Sbjct: 82 LFSKFGKITSAAVMVDADGKSKGFGFVAFENPEDAEKAVTEMHEYELPGTERKLYVCRAQ 141
Query: 188 PRKEREKELG--------EKAKLF--TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMN 237
+ ER EL E+ + + N+Y+KN + ND+ LK+ FE YG ITS +VM
Sbjct: 142 KKNERSAELKRRYEQQKVERMQRYQGVNLYVKNLDDTVNDDILKQNFEAYGKITSAKVMC 201
Query: 238 ND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRF 292
+D G+S+GFGFV +E P+ A KAV NGK + K LYV AQ+K +R +L ++
Sbjct: 202 DDNGRSKGFGFVCFEKPDEATKAVTEMNGKMMCTKPLYVALAQRKEDRKAQLASQY 257
>gi|294940190|ref|XP_002782709.1| polyadenylate-binding protein, putative [Perkinsus marinus ATCC
50983]
gi|239894589|gb|EER14504.1| polyadenylate-binding protein, putative [Perkinsus marinus ATCC
50983]
Length = 716
Score = 243 bits (620), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 140/309 (45%), Positives = 180/309 (58%), Gaps = 52/309 (16%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D ERALDT+N+ +KGRP R+MWS RDP+LR+SG GNV++KNLD++IDNKA+YDTFS FG
Sbjct: 101 DAERALDTLNYSPIKGRPCRLMWSHRDPALRRSGAGNVYVKNLDRNIDNKALYDTFSLFG 160
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCKVA G S+G+GFVHFE++E+A +I K+NGM + K V+V F +K E+
Sbjct: 161 NILSCKVALTPDGKSRGFGFVHFESDESAEAAIAKLNGMQIGEKTVYVAPF--KKTAERN 218
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEF 255
G K FTNVYIK+ +N+EK+KE F +G ITS V D K R F FV Y E
Sbjct: 219 DG-TPKNFTNVYIKHIPASWNEEKIKEEFGAFGEITSLAV-QTDPKGRRFAFVNYAEFEQ 276
Query: 256 AEKAVQAWNGKEVDGK-------------------------------------------- 271
A AV+ +GK+V +
Sbjct: 277 ARAAVEEMDGKDVRNEEEKAADRAQREREREERKAAREAAKAEGREDGDDVESDDDDEEP 336
Query: 272 ---ILYVGRAQKKAERTQELKRRFEMLK-IERLNRYQGVNLYVKNLDDSIDDERLRKEFT 327
LYV RAQ KAER LK +F + + R+ GVNLYVKNL + +DD L+K F
Sbjct: 337 ETSHLYVARAQPKAERAAVLKEQFSASRGAQGGGRFGGVNLYVKNLGEDVDDAELKKMFE 396
Query: 328 PFGTITSAK 336
PFGT+TS K
Sbjct: 397 PFGTVTSVK 405
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 114/240 (47%), Gaps = 61/240 (25%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV+IK++ S + + + + F AFG I S V D +G + + FV++ E A ++E++
Sbjct: 227 NVYIKHIPASWNEEKIKEEFGAFGEITSLAVQTDPKG--RRFAFVNYAEFEQARAAVEEM 284
Query: 172 NG-----------------------------------------------MLLNSKIVFVG 184
+G + ++V
Sbjct: 285 DGKDVRNEEEKAADRAQREREREERKAAREAAKAEGREDGDDVESDDDDEEPETSHLYVA 344
Query: 185 KFIPRKEREKELGEK-----------AKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSY 233
+ P+ ER L E+ N+Y+KN GED +D +LK+MFEP+GT+TS
Sbjct: 345 RAQPKAERAAVLKEQFSASRGAQGGGRFGGVNLYVKNLGEDVDDAELKKMFEPFGTVTSV 404
Query: 234 RVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRF 292
+VM +D G SRGFGFV + + E A KAV + K + GK LYVG +K+ +R + L++R+
Sbjct: 405 KVMVDDKGVSRGFGFVCFSTHEEATKAVTDMHLKLIGGKPLYVGMHEKREQRLERLQQRY 464
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 114/226 (50%), Gaps = 21/226 (9%)
Query: 111 GNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSIE 169
+++ +L + +Y+ F+A G + S +V +D S GY +++F A ++++
Sbjct: 48 ASLYAGDLAPDVTEAVLYEVFNAIGPVASIRVCRDSVTRKSLGYAYINFHNVADAERALD 107
Query: 170 KVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGT 229
+N + + + R+ L NVY+KN + +++ L + F +G
Sbjct: 108 TLNYSPIKGRPCR----LMWSHRDPALRRSGA--GNVYVKNLDRNIDNKALYDTFSLFGN 161
Query: 230 ITSYRV-MNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S +V + DGKSRGFGFV +ES E AE A+ NG ++ K +YV +K AER
Sbjct: 162 ILSCKVALTPDGKSRGFGFVHFESDESAEAAIAKLNGMQIGEKTVYVAPFKKTAERNDGT 221
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITS 334
+ F N+Y+K++ S ++E++++EF FG ITS
Sbjct: 222 PKNF-------------TNVYIKHIPASWNEEKIKEEFGAFGEITS 254
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 60/136 (44%), Gaps = 18/136 (13%)
Query: 203 FTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND--GKSRGFGFVAYESPEFAEKAV 260
F ++Y + D + L E+F G + S RV + KS G+ ++ + + AE+A+
Sbjct: 47 FASLYAGDLAPDVTEAVLYEVFNAIGPVASIRVCRDSVTRKSLGYAYINFHNVADAERAL 106
Query: 261 QAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDE 320
N + G+ + + + L R N+YVKNLD +ID++
Sbjct: 107 DTLNYSPIKGRPCRLMWSHRDPA----------------LRRSGAGNVYVKNLDRNIDNK 150
Query: 321 RLRKEFTPFGTITSAK 336
L F+ FG I S K
Sbjct: 151 ALYDTFSLFGNILSCK 166
>gi|294889687|ref|XP_002772922.1| polyadenylate-binding protein, putative [Perkinsus marinus ATCC
50983]
gi|239877502|gb|EER04738.1| polyadenylate-binding protein, putative [Perkinsus marinus ATCC
50983]
Length = 715
Score = 243 bits (619), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 140/309 (45%), Positives = 180/309 (58%), Gaps = 52/309 (16%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D ERALDT+N+ +KGRP R+MWS RDP+LR+SG GNV++KNLD++IDNKA+YDTFS FG
Sbjct: 101 DAERALDTLNYSPIKGRPCRLMWSHRDPALRRSGAGNVYVKNLDRNIDNKALYDTFSLFG 160
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCKVA G S+G+GFVHFE++E+A +I K+NGM + K V+V F +K E+
Sbjct: 161 NILSCKVALTPDGKSRGFGFVHFESDESAEAAIAKLNGMQIGEKTVYVAPF--KKTAERN 218
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEF 255
G K FTNVYIK+ +N+EK+KE F +G ITS V D K R F FV Y E
Sbjct: 219 DG-TPKNFTNVYIKHIPASWNEEKIKEEFGAFGEITSLAV-QTDPKGRRFAFVNYAEFEQ 276
Query: 256 AEKAVQAWNGKEVDGK-------------------------------------------- 271
A AV+ +GK+V +
Sbjct: 277 ARAAVEEMDGKDVRNEEEKAADRAQREREREERKAAREAAKAEGREEGDDVESDDDDEEP 336
Query: 272 ---ILYVGRAQKKAERTQELKRRFEMLK-IERLNRYQGVNLYVKNLDDSIDDERLRKEFT 327
LYV RAQ KAER LK +F + + R+ GVNLYVKNL + +DD L+K F
Sbjct: 337 ETSHLYVARAQPKAERAAVLKEQFSASRGAQGGGRFGGVNLYVKNLGEDVDDAELKKMFE 396
Query: 328 PFGTITSAK 336
PFGT+TS K
Sbjct: 397 PFGTVTSVK 405
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 114/240 (47%), Gaps = 61/240 (25%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV+IK++ S + + + + F AFG I S V D +G + + FV++ E A ++E++
Sbjct: 227 NVYIKHIPASWNEEKIKEEFGAFGEITSLAVQTDPKG--RRFAFVNYAEFEQARAAVEEM 284
Query: 172 NG-----------------------------------------------MLLNSKIVFVG 184
+G + ++V
Sbjct: 285 DGKDVRNEEEKAADRAQREREREERKAAREAAKAEGREEGDDVESDDDDEEPETSHLYVA 344
Query: 185 KFIPRKEREKELGEK-----------AKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSY 233
+ P+ ER L E+ N+Y+KN GED +D +LK+MFEP+GT+TS
Sbjct: 345 RAQPKAERAAVLKEQFSASRGAQGGGRFGGVNLYVKNLGEDVDDAELKKMFEPFGTVTSV 404
Query: 234 RVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRF 292
+VM +D G SRGFGFV + + E A KAV + K + GK LYVG +K+ +R + L++R+
Sbjct: 405 KVMVDDKGVSRGFGFVCFSTHEEATKAVTDMHLKLIGGKPLYVGMHEKREQRLERLQQRY 464
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 114/226 (50%), Gaps = 21/226 (9%)
Query: 111 GNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSIE 169
+++ +L + +Y+ F+A G + S +V +D S GY +++F A ++++
Sbjct: 48 ASLYAGDLAPDVTEAVLYEVFNAIGPVASIRVCRDSVTRKSLGYAYINFHNVADAERALD 107
Query: 170 KVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGT 229
+N + + + R+ L NVY+KN + +++ L + F +G
Sbjct: 108 TLNYSPIKGRPCR----LMWSHRDPALRRSGA--GNVYVKNLDRNIDNKALYDTFSLFGN 161
Query: 230 ITSYRV-MNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S +V + DGKSRGFGFV +ES E AE A+ NG ++ K +YV +K AER
Sbjct: 162 ILSCKVALTPDGKSRGFGFVHFESDESAEAAIAKLNGMQIGEKTVYVAPFKKTAERNDGT 221
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITS 334
+ F N+Y+K++ S ++E++++EF FG ITS
Sbjct: 222 PKNF-------------TNVYIKHIPASWNEEKIKEEFGAFGEITS 254
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 60/136 (44%), Gaps = 18/136 (13%)
Query: 203 FTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND--GKSRGFGFVAYESPEFAEKAV 260
F ++Y + D + L E+F G + S RV + KS G+ ++ + + AE+A+
Sbjct: 47 FASLYAGDLAPDVTEAVLYEVFNAIGPVASIRVCRDSVTRKSLGYAYINFHNVADAERAL 106
Query: 261 QAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDE 320
N + G+ + + + L R N+YVKNLD +ID++
Sbjct: 107 DTLNYSPIKGRPCRLMWSHRDPA----------------LRRSGAGNVYVKNLDRNIDNK 150
Query: 321 RLRKEFTPFGTITSAK 336
L F+ FG I S K
Sbjct: 151 ALYDTFSLFGNILSCK 166
>gi|413956150|gb|AFW88799.1| hypothetical protein ZEAMMB73_294352 [Zea mays]
Length = 735
Score = 243 bits (619), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 121/262 (46%), Positives = 170/262 (64%), Gaps = 4/262 (1%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D ALD +N + +PIR+MWS RDP R+SGVGN+F+KNL S+DN ++ + FS FG
Sbjct: 174 DAVVALDKLNHSLVLDKPIRVMWSNRDPDARRSGVGNIFVKNLSSSVDNASLQELFSKFG 233
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+LSCKVA++E G S+GYGFV F ++E+A+++I +NG L N + + V FI + ER
Sbjct: 234 DVLSCKVAKNEDGTSRGYGFVQFTSQESADEAIGNLNGSLFNDRKLHVATFIKKSERSAN 293
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGKSRGFGFVAYESPE 254
+K FTN+Y+K+ +D +E +K F +G+I S ++M DG S GFGFV++++PE
Sbjct: 294 NDDK---FTNLYMKHLDDDITEELVKLKFSQFGSIVSVKIMKRPDGSSLGFGFVSFQNPE 350
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A KA NG + K LYV RAQKK ER Q L+R E + E + R N+Y+KN+
Sbjct: 351 SAIKAQSTMNGMLLGSKALYVARAQKKEERKQYLQRLHEEKRNEIMTRCNESNVYIKNIH 410
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
D +DD+ LR F FG ITSAK
Sbjct: 411 DEVDDDALRARFVEFGNITSAK 432
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 78/195 (40%), Positives = 118/195 (60%), Gaps = 11/195 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
N+++K+LD I + + FS FGSI+S K+ + G+S G+GFV F+ E+A K+ +
Sbjct: 300 NLYMKHLDDDITEELVKLKFSQFGSIVSVKIMKRPDGSSLGFGFVSFQNPESAIKAQSTM 359
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELG-----EKAKLFT-----NVYIKNFGEDFNDEKLK 221
NGMLL SK ++V + ++ER++ L ++ ++ T NVYIKN ++ +D+ L+
Sbjct: 360 NGMLLGSKALYVARAQKKEERKQYLQRLHEEKRNEIMTRCNESNVYIKNIHDEVDDDALR 419
Query: 222 EMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
F +G ITS +VM +D G SRGFGFV Y +PE A+ AV G GK LYV Q+
Sbjct: 420 ARFVEFGNITSAKVMRDDKGISRGFGFVCYSTPEEAKSAVNNMRGVMFFGKPLYVAIFQR 479
Query: 281 KAERTQELKRRFEML 295
K ER +L++ F L
Sbjct: 480 KEERKAKLQQHFAQL 494
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 61/102 (59%)
Query: 95 RIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYG 154
R+ +R+ + + NV+IKN+ +D+ A+ F FG+I S KV +D++G S+G+G
Sbjct: 386 RLHEEKRNEIMTRCNESNVYIKNIHDEVDDDALRARFVEFGNITSAKVMRDDKGISRGFG 445
Query: 155 FVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKEL 196
FV + T E A ++ + G++ K ++V F ++ER+ +L
Sbjct: 446 FVCYSTPEEAKSAVNNMRGVMFFGKPLYVAIFQRKEERKAKL 487
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 63/134 (47%), Gaps = 20/134 (14%)
Query: 206 VYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDGKSRG--FGFVAYESPEFAEKAVQAW 263
+Y+ + ED +E L E F GT+TS RV ++ SR +G+V Y S A A+
Sbjct: 123 LYVGDLHEDVAEEHLFEAFSKIGTVTSVRVCRDNATSRSLRYGYVNYFSRADAVVALDKL 182
Query: 264 NGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGV-NLYVKNLDDSIDDERL 322
N V K + V + + + R GV N++VKNL S+D+ L
Sbjct: 183 NHSLVLDKPIRVMWSNRDPDA-----------------RRSGVGNIFVKNLSSSVDNASL 225
Query: 323 RKEFTPFGTITSAK 336
++ F+ FG + S K
Sbjct: 226 QELFSKFGDVLSCK 239
>gi|340386042|ref|XP_003391517.1| PREDICTED: polyadenylate-binding protein 1-like, partial
[Amphimedon queenslandica]
Length = 393
Score = 242 bits (618), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 125/221 (56%), Positives = 158/221 (71%), Gaps = 6/221 (2%)
Query: 60 LGSGAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLD 119
LG I Q QP D ERA DTMN++ +KG+P IMWSQRDPSLR+S G++FIKNL+
Sbjct: 52 LGYAYIYFQ--QP--ADAERAFDTMNYEPIKGQPCYIMWSQRDPSLRRSRAGHIFIKNLE 107
Query: 120 KSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSK 179
+SID+KA+YDTFSAFG+ILSCKVA D G SKG GFVHF+ +EAA+ +IEKVNG LLN++
Sbjct: 108 RSIDHKALYDTFSAFGNILSCKVATDLNGQSKGIGFVHFDEQEAADLAIEKVNGQLLNNR 167
Query: 180 IVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NN 238
V VGKFIPRK+R G V++KNFGEDF DE L FE +G+I + VM +N
Sbjct: 168 KVHVGKFIPRKDR-SHTGFNQHYTNVVFVKNFGEDFTDEMLYNFFEKFGSIAAAVVMKDN 226
Query: 239 DGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQ 279
+G S+ FGFV++ES E A AVQA + V+G+ +Y RA
Sbjct: 227 EGVSKDFGFVSFESHEAASAAVQAVHSSIVNGRQVYCSRAH 267
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 115/236 (48%), Gaps = 19/236 (8%)
Query: 102 DPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFET 160
+P + ++++ +L ++ ++D FS G +LS V +D S GY +++F+
Sbjct: 2 NPPPSFPPLQSLYVGDLLPDVNEADLFDHFSKAGPVLSICVCRDLITKRSLGYAYIYFQQ 61
Query: 161 EEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKL 220
A ++ + +N + + + I +R+ L + +++IKN + + L
Sbjct: 62 PADAERAFDTMNYEPIKGQPCY----IMWSQRDPSL--RRSRAGHIFIKNLERSIDHKAL 115
Query: 221 KEMFEPYGTITSYRVMNN-DGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQ 279
+ F +G I S +V + +G+S+G GFV ++ E A+ A++ NG+ ++ + ++VG+
Sbjct: 116 YDTFSAFGNILSCKVATDLNGQSKGIGFVHFDEQEAADLAIEKVNGQLLNNRKVHVGKFI 175
Query: 280 KKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSA 335
+ +R+ N++ ++VKN + DE L F FG+I +A
Sbjct: 176 PRKDRSH-----------TGFNQHYTNVVFVKNFGEDFTDEMLYNFFEKFGSIAAA 220
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 62/134 (46%), Gaps = 18/134 (13%)
Query: 205 NVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQA 262
++Y+ + D N+ L + F G + S V + +S G+ ++ ++ P AE+A
Sbjct: 12 SLYVGDLLPDVNEADLFDHFSKAGPVLSICVCRDLITKRSLGYAYIYFQQPADAERAFDT 71
Query: 263 WNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERL 322
N + + G+ Y+ +Q+ L R + ++++KNL+ SID + L
Sbjct: 72 MNYEPIKGQPCYIMWSQRDPS----------------LRRSRAGHIFIKNLERSIDHKAL 115
Query: 323 RKEFTPFGTITSAK 336
F+ FG I S K
Sbjct: 116 YDTFSAFGNILSCK 129
>gi|402697293|gb|AFQ90834.1| polyA-binding protein cytoplasmic 1, partial [Oscaecilia
ochrocephala]
Length = 177
Score = 241 bits (615), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 123/178 (69%), Positives = 146/178 (82%), Gaps = 2/178 (1%)
Query: 116 KNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGML 175
KNLDKSIDNKA+YDTFSAFG+ILSCKV DE G SKGYGFV FET+EAA ++IEK+NGML
Sbjct: 1 KNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVXFETQEAAERAIEKMNGML 59
Query: 176 LNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRV 235
LN + VFVG+F RKERE ELG +AK FTNVYIKNFGED +DE+LKE+F YG S +V
Sbjct: 60 LNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKEVFGKYGPALSVKV 119
Query: 236 MNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRF 292
M ++ GKS+GFGFV++E E A+KAV NGKE++GK +YVGRAQKK ER ELKR+F
Sbjct: 120 MTDESGKSKGFGFVSFERHEDAQKAVDXMNGKELNGKXIYVGRAQKKVERQTELKRKF 177
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 48/129 (37%), Positives = 72/129 (55%), Gaps = 6/129 (4%)
Query: 77 TERALDTMNFDALKGRPIRI----MWSQRDPSL--RKSGVGNVFIKNLDKSIDNKAMYDT 130
ERA++ MN L R + + +R+ L R NV+IKN + +D++ + +
Sbjct: 48 AERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKEV 107
Query: 131 FSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRK 190
F +G LS KV DE G SKG+GFV FE E A K+++ +NG LN K ++VG+ +
Sbjct: 108 FGKYGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDXMNGKELNGKXIYVGRAQKKV 167
Query: 191 EREKELGEK 199
ER+ EL K
Sbjct: 168 ERQTELKRK 176
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 73/128 (57%), Gaps = 10/128 (7%)
Query: 209 KNFGEDFNDEKLKEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEV 268
KN + +++ L + F +G I S +V+ ++ S+G+GFV +E+ E AE+A++ NG +
Sbjct: 1 KNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVXFETQEAAERAIEKMNGMLL 60
Query: 269 DGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTP 328
+ + ++VGR + + ER EL R + N+Y+KN + +DDERL++ F
Sbjct: 61 NDRKVFVGRFKSRKEREAELGARAKEF----------TNVYIKNFGEDMDDERLKEVFGK 110
Query: 329 FGTITSAK 336
+G S K
Sbjct: 111 YGPALSVK 118
>gi|340546031|gb|AEK51814.1| cytoplasmic poly(A) binding protein 1 [Heteronotia binoei]
Length = 177
Score = 239 bits (611), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 121/178 (67%), Positives = 146/178 (82%), Gaps = 2/178 (1%)
Query: 116 KNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGML 175
KNLDKSIDNKA+YDTFSAFG+ILSCKV DE G SKGYGFVHFET+EAA ++IEK+NGML
Sbjct: 1 KNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGML 59
Query: 176 LNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRV 235
LN + VFVG+F RKERE ELG +AK FTNVYIKNFGED +DE+LK++F +G S +V
Sbjct: 60 LNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDLFGKFGPALSVKV 119
Query: 236 MNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRF 292
M ++ GKS+GFGFV++E E A+KAV NGKE++GK +YVGRAQKK ER E KR+F
Sbjct: 120 MTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTEXKRKF 177
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/125 (38%), Positives = 71/125 (56%), Gaps = 6/125 (4%)
Query: 77 TERALDTMNFDALKGRPIRI----MWSQRDPSL--RKSGVGNVFIKNLDKSIDNKAMYDT 130
ERA++ MN L R + + +R+ L R NV+IKN + +D++ + D
Sbjct: 48 AERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDL 107
Query: 131 FSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRK 190
F FG LS KV DE G SKG+GFV FE E A K+++++NG LN K ++VG+ +
Sbjct: 108 FGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKV 167
Query: 191 EREKE 195
ER+ E
Sbjct: 168 ERQTE 172
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 72/128 (56%), Gaps = 10/128 (7%)
Query: 209 KNFGEDFNDEKLKEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEV 268
KN + +++ L + F +G I S +V+ ++ S+G+GFV +E+ E AE+A++ NG +
Sbjct: 1 KNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNGMLL 60
Query: 269 DGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTP 328
+ + ++VGR + + ER EL R + N+Y+KN + +DDERL+ F
Sbjct: 61 NDRKVFVGRFKSRKEREAELGARAKEF----------TNVYIKNFGEDMDDERLKDLFGK 110
Query: 329 FGTITSAK 336
FG S K
Sbjct: 111 FGPALSVK 118
>gi|357120111|ref|XP_003561773.1| PREDICTED: polyadenylate-binding protein-like [Brachypodium
distachyon]
Length = 714
Score = 239 bits (611), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 121/262 (46%), Positives = 170/262 (64%), Gaps = 4/262 (1%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D AL+ MN + +PIR+MWS RDP R+SGVGNVF+KNL+ IDN + + FS FG
Sbjct: 155 DAMTALEKMNHSLILDKPIRVMWSNRDPDARRSGVGNVFVKNLNDHIDNVILQELFSKFG 214
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
ILSCKVA+++ G S+GYGFV F +E+A+ +IE +N + + V FI + ER
Sbjct: 215 DILSCKVARNDDGTSRGYGFVQFAAQESADIAIENLNNSHFEGRQLHVAHFIKKSERSAN 274
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMN-NDGKSRGFGFVAYESPE 254
+K +TN+Y+KN +D +E +K F +G + S ++M +DG S+GFGFV+++SP+
Sbjct: 275 NDDK---YTNLYMKNLDDDMTEELIKLKFSQFGPLISVKIMKRDDGTSKGFGFVSFKSPD 331
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A+KA +A NG + K LYV RAQKKAER Q L+ E + E L + G N+Y+KN+
Sbjct: 332 SAKKAKEAMNGIPLGSKSLYVARAQKKAERKQYLQLLHEEKRNEILTKSNGSNVYIKNIS 391
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
D +DDE LR+ F FG ITS K
Sbjct: 392 DRVDDETLRERFDEFGNITSVK 413
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 74/195 (37%), Positives = 120/195 (61%), Gaps = 11/195 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
N+++KNLD + + + FS FG ++S K+ + + G SKG+GFV F++ ++A K+ E +
Sbjct: 281 NLYMKNLDDDMTEELIKLKFSQFGPLISVKIMKRDDGTSKGFGFVSFKSPDSAKKAKEAM 340
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELG-----EKAKLFT-----NVYIKNFGEDFNDEKLK 221
NG+ L SK ++V + + ER++ L ++ ++ T NVYIKN + +DE L+
Sbjct: 341 NGIPLGSKSLYVARAQKKAERKQYLQLLHEEKRNEILTKSNGSNVYIKNISDRVDDETLR 400
Query: 222 EMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
E F+ +G ITS ++M +D G S+GFGFV Y +P+ A+ AV + G K LYV AQ+
Sbjct: 401 ERFDEFGNITSVKIMRDDKGISKGFGFVCYNTPDEAKCAVSSMRGVMFYDKPLYVAIAQR 460
Query: 281 KAERTQELKRRFEML 295
K +R L++RF L
Sbjct: 461 KEDRKARLEQRFAEL 475
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 123/229 (53%), Gaps = 21/229 (9%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSK-GYGFVHFETEEAANKSI 168
V +++ +L + + ++D FS G++ S +V +D +S YG+V++ ++ A ++
Sbjct: 101 VPALYVGDLHEDAQEEHLFDAFSKVGAVTSVRVCRDTATSSSLRYGYVNYFSQADAMTAL 160
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
EK+N L+ K + V + R + G NV++KN + ++ L+E+F +G
Sbjct: 161 EKMNHSLILDKPIRV-MWSNRDPDARRSG-----VGNVFVKNLNDHIDNVILQELFSKFG 214
Query: 229 TITSYRVM-NNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQE 287
I S +V N+DG SRG+GFV + + E A+ A++ N +G+ L+V KK+ER+
Sbjct: 215 DILSCKVARNDDGTSRGYGFVQFAAQESADIAIENLNNSHFEGRQLHVAHFIKKSERSAN 274
Query: 288 LKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
++ NLY+KNLDD + +E ++ +F+ FG + S K
Sbjct: 275 NDDKY-------------TNLYMKNLDDDMTEELIKLKFSQFGPLISVK 310
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 66/108 (61%), Gaps = 1/108 (0%)
Query: 100 QRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFE 159
+R+ L KS NV+IKN+ +D++ + + F FG+I S K+ +D++G SKG+GFV +
Sbjct: 372 KRNEILTKSNGSNVYIKNISDRVDDETLRERFDEFGNITSVKIMRDDKGISKGFGFVCYN 431
Query: 160 TEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEK-AKLFTNV 206
T + A ++ + G++ K ++V +++R+ L ++ A+L T V
Sbjct: 432 TPDEAKCAVSSMRGVMFYDKPLYVAIAQRKEDRKARLEQRFAELATMV 479
>gi|242041385|ref|XP_002468087.1| hypothetical protein SORBIDRAFT_01g039310 [Sorghum bicolor]
gi|241921941|gb|EER95085.1| hypothetical protein SORBIDRAFT_01g039310 [Sorghum bicolor]
Length = 654
Score = 239 bits (609), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 118/262 (45%), Positives = 171/262 (65%), Gaps = 4/262 (1%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D ALD +N + +PIR+MWS RDP R+SGVGN+F+KNL+ S+DN ++ + FS FG
Sbjct: 95 DAVMALDKLNHSLVLDKPIRVMWSNRDPDARRSGVGNIFVKNLNNSVDNASLQELFSKFG 154
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+LSCKVA++E G S+GYGFV F ++E+A+++I +NG L N + + V FI + ER
Sbjct: 155 DVLSCKVAKNEDGTSRGYGFVQFASQESADEAIGNLNGSLFNDRKLHVATFIKKSERSAN 214
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGKSRGFGFVAYESPE 254
+K FTN+Y+K+ +D +E +K F +G I S ++M DG S GFGFV++++PE
Sbjct: 215 NDDK---FTNLYMKHLDDDITEELVKLKFSQFGPIVSVKIMRRPDGSSLGFGFVSFQNPE 271
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A KA + +G + K LYV RAQKK ER Q L+R E + E + + N+Y+KN+
Sbjct: 272 SAIKAQETMHGMLLGSKALYVARAQKKEERKQYLQRLHEEKRNEIITKSNESNVYIKNIH 331
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
D +DD+ LR F +G ITSAK
Sbjct: 332 DEVDDDALRARFAEYGNITSAK 353
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 77/195 (39%), Positives = 118/195 (60%), Gaps = 11/195 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
N+++K+LD I + + FS FG I+S K+ + G+S G+GFV F+ E+A K+ E +
Sbjct: 221 NLYMKHLDDDITEELVKLKFSQFGPIVSVKIMRRPDGSSLGFGFVSFQNPESAIKAQETM 280
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELG-----EKAKLFT-----NVYIKNFGEDFNDEKLK 221
+GMLL SK ++V + ++ER++ L ++ ++ T NVYIKN ++ +D+ L+
Sbjct: 281 HGMLLGSKALYVARAQKKEERKQYLQRLHEEKRNEIITKSNESNVYIKNIHDEVDDDALR 340
Query: 222 EMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
F YG ITS +VM +D G SRGFGFV Y +PE A+ V + G GK LYV Q+
Sbjct: 341 ARFAEYGNITSAKVMRDDKGISRGFGFVCYSTPEEAKSVVNSMRGVMFFGKPLYVAIFQR 400
Query: 281 KAERTQELKRRFEML 295
K ER +L++ F L
Sbjct: 401 KEERRAKLQQHFAQL 415
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 119/226 (52%), Gaps = 21/226 (9%)
Query: 113 VFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQ-GNSKGYGFVHFETEEAANKSIEKV 171
+++ +L + + + ++D FS G++ S +V +D S YG+V++ + A +++K+
Sbjct: 44 LYVGDLHEDVAEEHLFDAFSKIGTVTSVRVCRDNATSRSLRYGYVNYFSRADAVMALDKL 103
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTIT 231
N L+ K + V + R + G N+++KN ++ L+E+F +G +
Sbjct: 104 NHSLVLDKPIRV-MWSNRDPDARRSG-----VGNIFVKNLNNSVDNASLQELFSKFGDVL 157
Query: 232 SYRVMNN-DGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKR 290
S +V N DG SRG+GFV + S E A++A+ NG + + L+V KK+ER+
Sbjct: 158 SCKVAKNEDGTSRGYGFVQFASQESADEAIGNLNGSLFNDRKLHVATFIKKSERSANNDD 217
Query: 291 RFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+F NLY+K+LDD I +E ++ +F+ FG I S K
Sbjct: 218 KF-------------TNLYMKHLDDDITEELVKLKFSQFGPIVSVK 250
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 61/102 (59%)
Query: 95 RIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYG 154
R+ +R+ + KS NV+IKN+ +D+ A+ F+ +G+I S KV +D++G S+G+G
Sbjct: 307 RLHEEKRNEIITKSNESNVYIKNIHDEVDDDALRARFAEYGNITSAKVMRDDKGISRGFG 366
Query: 155 FVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKEL 196
FV + T E A + + G++ K ++V F ++ER +L
Sbjct: 367 FVCYSTPEEAKSVVNSMRGVMFFGKPLYVAIFQRKEERRAKL 408
>gi|440913528|gb|ELR62976.1| Polyadenylate-binding protein 4, partial [Bos grunniens mutus]
Length = 196
Score = 238 bits (608), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 118/156 (75%), Positives = 131/156 (83%), Gaps = 3/156 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD +KG+PIRIMWSQRDPSLRKSGVGNVFIKNLD SI
Sbjct: 44 GYAYVNFQQP--ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDNSI 101
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
D+KA+YDTFSAFG+ILSCKV DE G SKGY FVHFET+EAA+K+IEK+NGMLLN + VF
Sbjct: 102 DDKALYDTFSAFGNILSCKVVCDENG-SKGYAFVHFETQEAADKAIEKMNGMLLNDRKVF 160
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDE 218
VG+F RKERE ELG KAK FTNVYIKNFGE+ +DE
Sbjct: 161 VGRFKSRKEREAELGAKAKEFTNVYIKNFGEEVDDE 196
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 113/212 (53%), Gaps = 17/212 (8%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + +Y+ FS G +LS +V +D S GY +V+F+ A +++
Sbjct: 1 MASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERAL 60
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N ++ K + I +R+ L + NV+IKN +D+ L + F +G
Sbjct: 61 DTMNFDVIKGKPIR----IMWSQRDPSLRKSG--VGNVFIKNLDNSIDDKALYDTFSAFG 114
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S +V+ ++ S+G+ FV +E+ E A+KA++ NG ++ + ++VGR + + ER EL
Sbjct: 115 NILSCKVVCDENGSKGYAFVHFETQEAADKAIEKMNGMLLNDRKVFVGRFKSRKEREAEL 174
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDE 320
+ + + N+Y+KN + +DDE
Sbjct: 175 GAKAK----------EFTNVYIKNFGEEVDDE 196
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 65/136 (47%), Gaps = 20/136 (14%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQ 261
++Y+ + D + L E F P G + S RV + +S G+ +V ++ P AE+A+
Sbjct: 2 ASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALD 61
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGV-NLYVKNLDDSIDDE 320
N + GK + + +Q+ R GV N+++KNLD+SIDD+
Sbjct: 62 TMNFDVIKGKPIRIMWSQRDPSL-----------------RKSGVGNVFIKNLDNSIDDK 104
Query: 321 RLRKEFTPFGTITSAK 336
L F+ FG I S K
Sbjct: 105 ALYDTFSAFGNILSCK 120
>gi|402697297|gb|AFQ90836.1| polyA-binding protein cytoplasmic 1, partial [Testudo hermanni]
Length = 176
Score = 238 bits (608), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 121/177 (68%), Positives = 145/177 (81%), Gaps = 2/177 (1%)
Query: 116 KNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGML 175
KNLDKSIDNKA+YD FSAFG+ILSCKV DE G SKGYGFVHFET+EAA ++IEK+NGML
Sbjct: 1 KNLDKSIDNKALYDXFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGML 59
Query: 176 LNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRV 235
LN + VFVG+F RKERE ELG +AK FTNVYIKNFGED +DE+LKE+F +G S +V
Sbjct: 60 LNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKELFGXFGPALSVKV 119
Query: 236 MNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRR 291
M ++ GKS+GFGFV++E E A+KAV NGKE++GK +YVGRAQKK ER ELKR+
Sbjct: 120 MTDESGKSKGFGFVSFERHEDAQKAVXEMNGKELNGKQIYVGRAQKKVERQTELKRK 176
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/129 (37%), Positives = 72/129 (55%), Gaps = 6/129 (4%)
Query: 77 TERALDTMNFDALKGRPIRI----MWSQRDPSL--RKSGVGNVFIKNLDKSIDNKAMYDT 130
ERA++ MN L R + + +R+ L R NV+IKN + +D++ + +
Sbjct: 48 AERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKEL 107
Query: 131 FSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRK 190
F FG LS KV DE G SKG+GFV FE E A K++ ++NG LN K ++VG+ +
Sbjct: 108 FGXFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVXEMNGKELNGKQIYVGRAQKKV 167
Query: 191 EREKELGEK 199
ER+ EL K
Sbjct: 168 ERQTELKRK 176
Score = 77.4 bits (189), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 73/128 (57%), Gaps = 10/128 (7%)
Query: 209 KNFGEDFNDEKLKEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEV 268
KN + +++ L + F +G I S +V+ ++ S+G+GFV +E+ E AE+A++ NG +
Sbjct: 1 KNLDKSIDNKALYDXFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNGMLL 60
Query: 269 DGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTP 328
+ + ++VGR + + ER EL R + N+Y+KN + +DDERL++ F
Sbjct: 61 NDRKVFVGRFKSRKEREAELGARAKEF----------TNVYIKNFGEDMDDERLKELFGX 110
Query: 329 FGTITSAK 336
FG S K
Sbjct: 111 FGPALSVK 118
>gi|115452253|ref|NP_001049727.1| Os03g0278500 [Oryza sativa Japonica Group]
gi|108707490|gb|ABF95285.1| polyadenylate binding protein, types 1, 2, 3, 4 family protein,
expressed [Oryza sativa Japonica Group]
gi|113548198|dbj|BAF11641.1| Os03g0278500 [Oryza sativa Japonica Group]
gi|215678518|dbj|BAG92173.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222624669|gb|EEE58801.1| hypothetical protein OsJ_10348 [Oryza sativa Japonica Group]
Length = 647
Score = 238 bits (607), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 117/262 (44%), Positives = 172/262 (65%), Gaps = 4/262 (1%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D AL+ +N + +PIR+MWS RDP R+SGVGNVF+KNL+ +DN ++ + F FG
Sbjct: 91 DAAIALEKLNHSLILDKPIRVMWSNRDPDARRSGVGNVFVKNLNDLVDNVSLQELFCKFG 150
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
ILSCKVA++E G S+GYGFV F +E+A+ SI+ +N + + V FI + ER
Sbjct: 151 DILSCKVAKNEDGTSRGYGFVQFALQESADASIQNLNNSHFCGRQLHVATFIKKSERSTN 210
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMN-NDGKSRGFGFVAYESPE 254
+K +TN+Y+KN +D +E +K F YG + S ++M +DG S+GFGFV++++PE
Sbjct: 211 NDDK---YTNLYMKNLDDDITEELIKLKFSQYGLVISVKIMKRDDGTSKGFGFVSFQNPE 267
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A++A ++ NG + K LYV RAQKKAER Q L+R E + E + + G N+Y+KN++
Sbjct: 268 SAKRAKESMNGMLLGSKTLYVARAQKKAERKQYLQRLHEEKRNEIITKSNGSNVYIKNIN 327
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
D + D+ LR+ F FG ITSAK
Sbjct: 328 DEVGDDALRERFNEFGNITSAK 349
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 77/195 (39%), Positives = 120/195 (61%), Gaps = 11/195 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
N+++KNLD I + + FS +G ++S K+ + + G SKG+GFV F+ E+A ++ E +
Sbjct: 217 NLYMKNLDDDITEELIKLKFSQYGLVISVKIMKRDDGTSKGFGFVSFQNPESAKRAKESM 276
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELG-----EKAKLFT-----NVYIKNFGEDFNDEKLK 221
NGMLL SK ++V + + ER++ L ++ ++ T NVYIKN ++ D+ L+
Sbjct: 277 NGMLLGSKTLYVARAQKKAERKQYLQRLHEEKRNEIITKSNGSNVYIKNINDEVGDDALR 336
Query: 222 EMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
E F +G ITS ++M ++ G S+GFGFV Y +PE A+ AV G GK LYV AQ+
Sbjct: 337 ERFNEFGNITSAKIMRDEKGISKGFGFVCYNTPEEAKCAVSNMRGVMFYGKPLYVAIAQR 396
Query: 281 KAERTQELKRRFEML 295
K ER +L++RF L
Sbjct: 397 KEERRAKLEQRFAEL 411
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 120/229 (52%), Gaps = 21/229 (9%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQ-GNSKGYGFVHFETEEAANKSI 168
V +++ +L +S+ + + + F G++ S +V +D NS YG+V++ ++ A ++
Sbjct: 37 VPALYVGDLHESVREEHLLEVFGKIGTLTSVRVCRDNATSNSLRYGYVNYLSQADAAIAL 96
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
EK+N L+ K + V + R + G NV++KN + ++ L+E+F +G
Sbjct: 97 EKLNHSLILDKPIRV-MWSNRDPDARRSG-----VGNVFVKNLNDLVDNVSLQELFCKFG 150
Query: 229 TITSYRVMNN-DGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQE 287
I S +V N DG SRG+GFV + E A+ ++Q N G+ L+V KK+ER+
Sbjct: 151 DILSCKVAKNEDGTSRGYGFVQFALQESADASIQNLNNSHFCGRQLHVATFIKKSERSTN 210
Query: 288 LKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
++ NLY+KNLDD I +E ++ +F+ +G + S K
Sbjct: 211 NDDKY-------------TNLYMKNLDDDITEELIKLKFSQYGLVISVK 246
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 69/113 (61%), Gaps = 1/113 (0%)
Query: 95 RIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYG 154
R+ +R+ + KS NV+IKN++ + + A+ + F+ FG+I S K+ +DE+G SKG+G
Sbjct: 303 RLHEEKRNEIITKSNGSNVYIKNINDEVGDDALRERFNEFGNITSAKIMRDEKGISKGFG 362
Query: 155 FVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEK-AKLFTNV 206
FV + T E A ++ + G++ K ++V ++ER +L ++ A+L T V
Sbjct: 363 FVCYNTPEEAKCAVSNMRGVMFYGKPLYVAIAQRKEERRAKLEQRFAELATMV 415
>gi|156086682|ref|XP_001610750.1| polyadenylate binding protein [Babesia bovis T2Bo]
gi|154798003|gb|EDO07182.1| polyadenylate binding protein, putative [Babesia bovis]
Length = 585
Score = 238 bits (606), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 128/263 (48%), Positives = 181/263 (68%), Gaps = 6/263 (2%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D E AL+ +N+ +KG+P RIMWS+RDPSLRKSG GN+F+KNLDK+ID KA+YDTFS FG
Sbjct: 89 DAEAALECLNYIEIKGQPARIMWSERDPSLRKSGTGNIFVKNLDKAIDTKALYDTFSHFG 148
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCKVA D GNSKGYGFVH+ TEE+A ++IEKVNGML+ + V V F+ R ER
Sbjct: 149 TILSCKVAIDSLGNSKGYGFVHYTTEESAKEAIEKVNGMLIGNSQVSVAPFLRRNERTST 208
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEF 255
+G+ +FTN+Y++NF + + ++ L + F YG ITS ++ +D K R F FV +
Sbjct: 209 VGD---VFTNLYVRNFPDTWTEDDLHQTFSKYGEITSL-LLKSDDKGRRFAFVNFVDTNM 264
Query: 256 AEKAVQAWNGKEVDG--KILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNL 313
A+ A++ NG + + + + V + KA R LK +++ ++ N++ GVNLY+KNL
Sbjct: 265 AKAAMEGENGVKFESVEEPMMVCQHMDKARRYAMLKAQYDSNAQDQRNKFMGVNLYIKNL 324
Query: 314 DDSIDDERLRKEFTPFGTITSAK 336
DD DD+ LR F +GT+TS+K
Sbjct: 325 DDDFDDDGLRDLFKQYGTVTSSK 347
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 69/205 (33%), Positives = 114/205 (55%), Gaps = 23/205 (11%)
Query: 106 RKSGVGNVF----IKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETE 161
R S VG+VF ++N + ++ TFS +G I S + D++G + + FV+F
Sbjct: 205 RTSTVGDVFTNLYVRNFPDTWTEDDLHQTFSKYGEITSLLLKSDDKG--RRFAFVNFVDT 262
Query: 162 EAANKSIEKVNGMLLNS--KIVFVGKFIPRKEREKELGEKAK------------LFTNVY 207
A ++E NG+ S + + V + + + R L KA+ + N+Y
Sbjct: 263 NMAKAAMEGENGVKFESVEEPMMVCQHMDKARRYAML--KAQYDSNAQDQRNKFMGVNLY 320
Query: 208 IKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPEFAEKAVQAWNGK 266
IKN +DF+D+ L+++F+ YGT+TS +VM +++G SRGFGFV + P+ A KAV + K
Sbjct: 321 IKNLDDDFDDDGLRDLFKQYGTVTSSKVMRDHNGVSRGFGFVCFSRPDEATKAVAGMHLK 380
Query: 267 EVDGKILYVGRAQKKAERTQELKRR 291
V K LYVG A+K+ +R +++R
Sbjct: 381 LVKNKPLYVGLAEKREQRASRMQQR 405
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 67/139 (48%), Gaps = 26/139 (18%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND--GKSRGFGFVAYESPEFAEKAVQ 261
++Y+ N + + L E+F G + S RV + KS G+ +V Y + + AE A++
Sbjct: 36 ASLYVGNLLPEVTEAMLYEVFNGIGPVASIRVCRDSLTRKSLGYAYVNYYNFQDAEAALE 95
Query: 262 AWNGKEVDG---KILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGV-NLYVKNLDDSI 317
N E+ G +I++ +ER L++ G N++VKNLD +I
Sbjct: 96 CLNYIEIKGQPARIMW-------SERDPSLRK-------------SGTGNIFVKNLDKAI 135
Query: 318 DDERLRKEFTPFGTITSAK 336
D + L F+ FGTI S K
Sbjct: 136 DTKALYDTFSHFGTILSCK 154
>gi|402697291|gb|AFQ90833.1| polyA-binding protein cytoplasmic 1, partial [Malaclemys terrapin]
Length = 175
Score = 236 bits (602), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 121/176 (68%), Positives = 143/176 (81%), Gaps = 2/176 (1%)
Query: 116 KNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGML 175
KNLDKSIDNKA+YDTFSAFG+ILSCKV DE G SKGYGFVHFET+EAA ++IEK+NGML
Sbjct: 1 KNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGML 59
Query: 176 LNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRV 235
LN + VFVG+F RKERE ELG +AK FTNVYIKNFGED +DE+LKE+F S +V
Sbjct: 60 LNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKELFGXXXPALSVKV 119
Query: 236 MNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKR 290
M ++ GKS+GFGFV++E E A+KAV NGKE++GK +YVGRAQKK ER ELKR
Sbjct: 120 MTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVERQTELKR 175
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 70/126 (55%), Gaps = 6/126 (4%)
Query: 77 TERALDTMNFDALKGRPIRI----MWSQRDPSL--RKSGVGNVFIKNLDKSIDNKAMYDT 130
ERA++ MN L R + + +R+ L R NV+IKN + +D++ + +
Sbjct: 48 AERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKEL 107
Query: 131 FSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRK 190
F LS KV DE G SKG+GFV FE E A K+++++NG LN K ++VG+ +
Sbjct: 108 FGXXXPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKV 167
Query: 191 EREKEL 196
ER+ EL
Sbjct: 168 ERQTEL 173
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 69/118 (58%), Gaps = 10/118 (8%)
Query: 209 KNFGEDFNDEKLKEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEV 268
KN + +++ L + F +G I S +V+ ++ S+G+GFV +E+ E AE+A++ NG +
Sbjct: 1 KNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNGMLL 60
Query: 269 DGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEF 326
+ + ++VGR + + ER EL R + N+Y+KN + +DDERL++ F
Sbjct: 61 NDRKVFVGRFKSRKEREAELGARAKEF----------TNVYIKNFGEDMDDERLKELF 108
>gi|218192545|gb|EEC74972.1| hypothetical protein OsI_11001 [Oryza sativa Indica Group]
Length = 647
Score = 235 bits (599), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 116/262 (44%), Positives = 171/262 (65%), Gaps = 4/262 (1%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D AL+ +N + +PIR+MWS RDP R+SGVGNVF+KNL+ +DN ++ + F FG
Sbjct: 91 DAAIALEKLNHSLILDKPIRVMWSNRDPDARRSGVGNVFVKNLNDLVDNVSLQELFCKFG 150
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
ILSCKVA++E G S+GYGFV F +E+A+ SI+ +N + + V FI + ER
Sbjct: 151 DILSCKVAKNEDGTSRGYGFVQFALQESADASIQNLNNSHFCGRQLHVATFIKKSERSTN 210
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMN-NDGKSRGFGFVAYESPE 254
+K +TN+Y+KN +D +E +K F YG + S ++M +DG S+GFGFV++++PE
Sbjct: 211 NDDK---YTNLYMKNLDDDITEELIKLKFSQYGLVISVKIMKRDDGTSKGFGFVSFQNPE 267
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A++A ++ NG + K LYV RAQKKAER Q L+ E + E + + G N+Y+KN++
Sbjct: 268 SAKRAKESMNGMLLGSKTLYVARAQKKAERKQYLQCLHEEKRNEIITKSNGSNVYIKNIN 327
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
D + D+ LR+ F FG ITSAK
Sbjct: 328 DEVGDDALRERFNEFGNITSAK 349
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 77/195 (39%), Positives = 120/195 (61%), Gaps = 11/195 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
N+++KNLD I + + FS +G ++S K+ + + G SKG+GFV F+ E+A ++ E +
Sbjct: 217 NLYMKNLDDDITEELIKLKFSQYGLVISVKIMKRDDGTSKGFGFVSFQNPESAKRAKESM 276
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELG-----EKAKLFT-----NVYIKNFGEDFNDEKLK 221
NGMLL SK ++V + + ER++ L ++ ++ T NVYIKN ++ D+ L+
Sbjct: 277 NGMLLGSKTLYVARAQKKAERKQYLQCLHEEKRNEIITKSNGSNVYIKNINDEVGDDALR 336
Query: 222 EMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
E F +G ITS ++M ++ G S+GFGFV Y +PE A+ AV G GK LYV AQ+
Sbjct: 337 ERFNEFGNITSAKIMRDEKGISKGFGFVCYNTPEEAKCAVSNMRGVMFYGKPLYVAIAQR 396
Query: 281 KAERTQELKRRFEML 295
K ER +L++RF L
Sbjct: 397 KEERRAKLEQRFAEL 411
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 120/229 (52%), Gaps = 21/229 (9%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQ-GNSKGYGFVHFETEEAANKSI 168
V +++ +L +S+ + + + F G++ S +V +D NS YG+V++ ++ A ++
Sbjct: 37 VPALYVGDLHESVREEHLLEVFGKIGTLTSVRVCRDNATSNSLRYGYVNYLSQADAAIAL 96
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
EK+N L+ K + V + R + G NV++KN + ++ L+E+F +G
Sbjct: 97 EKLNHSLILDKPIRV-MWSNRDPDARRSG-----VGNVFVKNLNDLVDNVSLQELFCKFG 150
Query: 229 TITSYRVMNN-DGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQE 287
I S +V N DG SRG+GFV + E A+ ++Q N G+ L+V KK+ER+
Sbjct: 151 DILSCKVAKNEDGTSRGYGFVQFALQESADASIQNLNNSHFCGRQLHVATFIKKSERSTN 210
Query: 288 LKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
++ NLY+KNLDD I +E ++ +F+ +G + S K
Sbjct: 211 NDDKY-------------TNLYMKNLDDDITEELIKLKFSQYGLVISVK 246
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 67/108 (62%), Gaps = 1/108 (0%)
Query: 100 QRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFE 159
+R+ + KS NV+IKN++ + + A+ + F+ FG+I S K+ +DE+G SKG+GFV +
Sbjct: 308 KRNEIITKSNGSNVYIKNINDEVGDDALRERFNEFGNITSAKIMRDEKGISKGFGFVCYN 367
Query: 160 TEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEK-AKLFTNV 206
T E A ++ + G++ K ++V ++ER +L ++ A+L T V
Sbjct: 368 TPEEAKCAVSNMRGVMFYGKPLYVAIAQRKEERRAKLEQRFAELATMV 415
>gi|255549774|ref|XP_002515938.1| polyadenylate-binding protein, putative [Ricinus communis]
gi|223544843|gb|EEF46358.1| polyadenylate-binding protein, putative [Ricinus communis]
Length = 608
Score = 234 bits (598), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 132/337 (39%), Positives = 199/337 (59%), Gaps = 6/337 (1%)
Query: 1 MYTAQTVQLSEEGIIIPKHNVATRELSAKVVEGVSRSLSSLIDGNTVKYDWDSGYTCHQL 60
M Q V L G P+ ++ +L +V E R++ S + + T L
Sbjct: 1 MAMEQLVSLKLPGDPRPRLSLYVGDLDPEVTEMNLRTVFSSMGPIRNVHLCRCSLTGRSL 60
Query: 61 GSGAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDK 120
G V +PY D +AL +N LKG+ +RIMW QR+P RKSG+GN+++KNLD
Sbjct: 61 CYG--YVNFYRPY--DAYKALSNLNHTYLKGKLMRIMWCQRNPCARKSGIGNLYVKNLDA 116
Query: 121 SIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKI 180
SID+ + FS FG+ILSCKV +E G SKGYGFV F++E++A + ++ +L K
Sbjct: 117 SIDSAGLQSLFSKFGTILSCKVV-EEHGKSKGYGFVQFDSEDSALAARTALHDTMLKEKK 175
Query: 181 VFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NND 239
++V +F+ + ER FTN+Y+KN +D + MF +G I S +M +++
Sbjct: 176 LYVSRFVKKSERTTATSYDELKFTNLYVKNLSKDMTQDAFHNMFSAFGEIISAVIMQDHN 235
Query: 240 GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIER 299
GKSRGFGFV +ESPE A+KAV A NG +++ + L+VGRAQ KAER + L+ ++ +
Sbjct: 236 GKSRGFGFVDFESPEDAKKAVDALNGYQLESRTLFVGRAQAKAERKKILQHEYKDIFNTH 295
Query: 300 LNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ +++ NLYVKNL ID+++L++ F+ G I SAK
Sbjct: 296 MEKFKASNLYVKNLALCIDNDKLQELFSCSGKIVSAK 332
Score = 148 bits (373), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 81/194 (41%), Positives = 118/194 (60%), Gaps = 11/194 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
N+++KNL K + A ++ FSAFG I+S + QD G S+G+GFV FE+ E A K+++ +
Sbjct: 200 NLYVKNLSKDMTQDAFHNMFSAFGEIISAVIMQDHNGKSRGFGFVDFESPEDAKKAVDAL 259
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAK-LF---------TNVYIKNFGEDFNDEKLK 221
NG L S+ +FVG+ + ER+K L + K +F +N+Y+KN +++KL+
Sbjct: 260 NGYQLESRTLFVGRAQAKAERKKILQHEYKDIFNTHMEKFKASNLYVKNLALCIDNDKLQ 319
Query: 222 EMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
E+F G I S +VM D G SRGFGFV + SPE A+KA+ A NG GK LYV AQ
Sbjct: 320 ELFSCSGKIVSAKVMRYDNGASRGFGFVCFSSPEEAKKALNALNGAVFQGKSLYVAMAQC 379
Query: 281 KAERTQELKRRFEM 294
K +R L+ F +
Sbjct: 380 KRDRQLALQTYFSV 393
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 69/137 (50%), Gaps = 16/137 (11%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQR----------------DPSLRKSGVGNVFIKNLD 119
D ++A+D +N L+ R + + +Q + + K N+++KNL
Sbjct: 251 DAKKAVDALNGYQLESRTLFVGRAQAKAERKKILQHEYKDIFNTHMEKFKASNLYVKNLA 310
Query: 120 KSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSK 179
IDN + + FS G I+S KV + + G S+G+GFV F + E A K++ +NG + K
Sbjct: 311 LCIDNDKLQELFSCSGKIVSAKVMRYDNGASRGFGFVCFSSPEEAKKALNALNGAVFQGK 370
Query: 180 IVFVGKFIPRKEREKEL 196
++V +++R+ L
Sbjct: 371 SLYVAMAQCKRDRQLAL 387
>gi|147838149|emb|CAN74140.1| hypothetical protein VITISV_008914 [Vitis vinifera]
Length = 544
Score = 233 bits (594), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 129/282 (45%), Positives = 182/282 (64%), Gaps = 23/282 (8%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIK------------------- 116
D A++ N L G+ IR+MWS RDP R+SG+GNVF+K
Sbjct: 65 DASHAIEAKNHTMLHGKVIRVMWSHRDPDARRSGIGNVFVKVYLFAVTSIIDAELYFLVC 124
Query: 117 -NLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGML 175
NL SIDN + F FG+ILSCKV E G SKGYGFV FE+EE AN +IEK+NG +
Sbjct: 125 LNLSDSIDNVRLQAMFQKFGNILSCKVVVTEDGKSKGYGFVQFESEEYANAAIEKLNGFI 184
Query: 176 LNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRV 235
++ K ++ GKF+ ++ ++ L +TN+YIKN D +E L+E F +G I S +
Sbjct: 185 IDGKQIYAGKFV--RKTDRVLPNPDAKYTNLYIKNLDPDVTEEALREKFFEFGKIASLVI 242
Query: 236 MNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEM 294
++ G SRGFGFV +ESPE A++A++A NG ++ K+LYV RAQKKAER Q L+R+FE
Sbjct: 243 SKDENGMSRGFGFVNFESPEDAKRALEALNGLQLGSKVLYVARAQKKAEREQLLRRQFEE 302
Query: 295 LKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ E++ +Y+G N+YVKN+DD+++D+ LR+ F+ G ITSAK
Sbjct: 303 KRNEQILKYRGSNVYVKNIDDNVNDDDLREHFSVCGKITSAK 344
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/192 (38%), Positives = 119/192 (61%), Gaps = 11/192 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
N++IKNLD + +A+ + F FG I S +++DE G S+G+GFV+FE+ E A +++E +
Sbjct: 212 NLYIKNLDPDVTEEALREKFFEFGKIASLVISKDENGMSRGFGFVNFESPEDAKRALEAL 271
Query: 172 NGMLLNSKIVFVGKFIPRKEREKEL--------GEKAKLF--TNVYIKNFGEDFNDEKLK 221
NG+ L SK+++V + + ERE+ L E+ + +NVY+KN ++ ND+ L+
Sbjct: 272 NGLQLGSKVLYVARAQKKAEREQLLRRQFEEKRNEQILKYRGSNVYVKNIDDNVNDDDLR 331
Query: 222 EMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
E F G ITS ++M + G S+GFGFV + +P+ A KAV ++G K LYV AQ+
Sbjct: 332 EHFSVCGKITSAKLMRDQKGISKGFGFVCFSTPDEASKAVNTFHGYMFHRKPLYVAIAQR 391
Query: 281 KAERTQELKRRF 292
K +R +L+ +
Sbjct: 392 KEDRQAQLQLHY 403
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 126/250 (50%), Gaps = 32/250 (12%)
Query: 103 PSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQ-GNSKGYGFVHFETE 161
P + ++++ +L I + ++D FS F S+ S ++ +D G S YG+V+F +
Sbjct: 4 PPTVPAAPASLYVGDLHPDITDGLLFDAFSEFKSLASVRICRDSSSGRSLCYGYVNFISP 63
Query: 162 EAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYI------------- 208
+ A+ +IE N +L+ K++ V ++ + +F VY+
Sbjct: 64 QDASHAIEAKNHTMLHGKVIRV--MWSHRDPDARRSGIGNVFVKVYLFAVTSIIDAELYF 121
Query: 209 ---KNFGEDFNDEKLKEMFEPYGTITSYR-VMNNDGKSRGFGFVAYESPEFAEKAVQAWN 264
N + ++ +L+ MF+ +G I S + V+ DGKS+G+GFV +ES E+A A++ N
Sbjct: 122 LVCLNLSDSIDNVRLQAMFQKFGNILSCKVVVTEDGKSKGYGFVQFESEEYANAAIEKLN 181
Query: 265 GKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRK 324
G +DGK +Y G+ +K +R +Y NLY+KNLD + +E LR+
Sbjct: 182 GFIIDGKQIYAGKFVRKTDRVLP----------NPDAKY--TNLYIKNLDPDVTEEALRE 229
Query: 325 EFTPFGTITS 334
+F FG I S
Sbjct: 230 KFFEFGKIAS 239
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 74/137 (54%), Gaps = 16/137 (11%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQ----------------RDPSLRKSGVGNVFIKNLD 119
D +RAL+ +N L + + + +Q R+ + K NV++KN+D
Sbjct: 263 DAKRALEALNGLQLGSKVLYVARAQKKAEREQLLRRQFEEKRNEQILKYRGSNVYVKNID 322
Query: 120 KSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSK 179
++++ + + FS G I S K+ +D++G SKG+GFV F T + A+K++ +G + + K
Sbjct: 323 DNVNDDDLREHFSVCGKITSAKLMRDQKGISKGFGFVCFSTPDEASKAVNTFHGYMFHRK 382
Query: 180 IVFVGKFIPRKEREKEL 196
++V +++R+ +L
Sbjct: 383 PLYVAIAQRKEDRQAQL 399
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 68/139 (48%), Gaps = 6/139 (4%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM--NNDGKSRGFGFVAYESPEFAEKAVQ 261
++Y+ + D D L + F + ++ S R+ ++ G+S +G+V + SP+ A A++
Sbjct: 12 ASLYVGDLHPDITDGLLFDAFSEFKSLASVRICRDSSSGRSLCYGYVNFISPQDASHAIE 71
Query: 262 AWNGKEVDGKILYVGRAQKKAE-RTQELKRRFEMLKIERLNRYQGVNLY---VKNLDDSI 317
A N + GK++ V + + + R + F + + + LY NL DSI
Sbjct: 72 AKNHTMLHGKVIRVMWSHRDPDARRSGIGNVFVKVYLFAVTSIIDAELYFLVCLNLSDSI 131
Query: 318 DDERLRKEFTPFGTITSAK 336
D+ RL+ F FG I S K
Sbjct: 132 DNVRLQAMFQKFGNILSCK 150
>gi|70947056|ref|XP_743180.1| polyadenylate-binding protein [Plasmodium chabaudi chabaudi]
gi|56522555|emb|CAH74716.1| polyadenylate-binding protein, putative [Plasmodium chabaudi
chabaudi]
Length = 629
Score = 233 bits (593), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 113/201 (56%), Positives = 146/201 (72%), Gaps = 7/201 (3%)
Query: 74 MLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSA 133
+ D ERALDT+N+ +KG+P R+MWS RDPSLRKSG GN+F+KNLDK+IDNKA++DTFS
Sbjct: 67 LADAERALDTLNYTNIKGQPARLMWSHRDPSLRKSGTGNIFVKNLDKTIDNKALFDTFSM 126
Query: 134 FGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKERE 193
FG+ILSCKVA DE G SK YGFVH+E EE+A ++IEKVNGM L SK V+VG FI + ER
Sbjct: 127 FGNILSCKVATDEFGKSKNYGFVHYEDEESAKEAIEKVNGMQLGSKNVYVGHFIKKSER- 185
Query: 194 KELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDGKSRGFGFVAYESP 253
FTN+Y+KNF + + LKE+F PYG ITS ++ +D K+R F F+ Y
Sbjct: 186 ---ATNDTKFTNLYVKNFPDTVTEAHLKELFSPYGEITSM-IVKSDNKNRKFCFINYSDA 241
Query: 254 EFAEKAVQAWNGKEV--DGKI 272
+ A A++ NGK++ DGKI
Sbjct: 242 DSARNAMENLNGKKITEDGKI 262
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/131 (43%), Positives = 78/131 (59%), Gaps = 15/131 (11%)
Query: 180 IVFVGKFIPRKEREKELGEKAKLFT------------NVYIKNFGEDFNDEKLKEMFEPY 227
I++VG R R L KAK T N+YIKN + +D+ LKE+FEPY
Sbjct: 366 ILYVGPHQSRARRHALL--KAKFDTLNTESRNKHPGVNLYIKNLDDSMDDQTLKELFEPY 423
Query: 228 GTITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQ 286
GTITS +VM +D +S+GFGFV + + E A KAV + K ++GK LYVG A+K+ +R
Sbjct: 424 GTITSAKVMKDDKDQSKGFGFVCFGTHEEANKAVTEMHLKIINGKPLYVGLAEKREQRLS 483
Query: 287 ELKRRFEMLKI 297
L++RF M I
Sbjct: 484 RLQQRFRMHPI 494
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 117/227 (51%), Gaps = 22/227 (9%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
++++ +L + + +Y+ F+ G +LS +V +D S GY +V++ A +++
Sbjct: 15 TASLYVGDLSEDVTEAVLYEIFNTVGHVLSIRVCRDSVTRKSLGYAYVNYHNLADAERAL 74
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N + I + R+ L + N+++KN + +++ L + F +G
Sbjct: 75 DTLNY----TNIKGQPARLMWSHRDPSLRKSGT--GNIFVKNLDKTIDNKALFDTFSMFG 128
Query: 229 TITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQE 287
I S +V ++ GKS+ +GFV YE E A++A++ NG ++ K +YVG KK+ER
Sbjct: 129 NILSCKVATDEFGKSKNYGFVHYEDEESAKEAIEKVNGMQLGSKNVYVGHFIKKSERA-- 186
Query: 288 LKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITS 334
N + NLYVKN D++ + L++ F+P+G ITS
Sbjct: 187 ------------TNDTKFTNLYVKNFPDTVTEAHLKELFSPYGEITS 221
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 113/246 (45%), Gaps = 30/246 (12%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
N+++KN ++ + + FS +G I S V D + ++ + F+++ ++A ++E +
Sbjct: 194 NLYVKNFPDTVTEAHLKELFSPYGEITSMIVKSDNK--NRKFCFINYSDADSARNAMENL 251
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFN---DEKLKEMFEPYG 228
NG KI GK + +KE EKA N N + N E E
Sbjct: 252 NG----KKITEDGKIDHNYDPKKEEAEKA---ANENSNNTTSEENAATSETPAEKKTDSE 304
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDG------------------ 270
+ T+ + ++ G + K +A N +
Sbjct: 305 SATNKDATTGEDQTSANGTTTTVTSTTDAKTEEATNDSTANAATAEKKDSKKSGESTETP 364
Query: 271 KILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFG 330
ILYVG Q +A R LK +F+ L E N++ GVNLY+KNLDDS+DD+ L++ F P+G
Sbjct: 365 NILYVGPHQSRARRHALLKAKFDTLNTESRNKHPGVNLYIKNLDDSMDDQTLKELFEPYG 424
Query: 331 TITSAK 336
TITSAK
Sbjct: 425 TITSAK 430
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 62/91 (68%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
N++IKNLD S+D++ + + F +G+I S KV +D++ SKG+GFV F T E ANK++ ++
Sbjct: 401 NLYIKNLDDSMDDQTLKELFEPYGTITSAKVMKDDKDQSKGFGFVCFGTHEEANKAVTEM 460
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKL 202
+ ++N K ++VG R++R L ++ ++
Sbjct: 461 HLKIINGKPLYVGLAEKREQRLSRLQQRFRM 491
>gi|68070939|ref|XP_677383.1| polyadenylate-binding protein [Plasmodium berghei strain ANKA]
gi|56497479|emb|CAH95361.1| polyadenylate-binding protein, putative [Plasmodium berghei]
Length = 833
Score = 233 bits (593), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 113/203 (55%), Positives = 147/203 (72%), Gaps = 7/203 (3%)
Query: 74 MLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSA 133
+ D ERALDT+N+ +KG+P R+MWS RDPSLRKSG GN+F+KNLDK+IDNKA++DTFS
Sbjct: 67 LADAERALDTLNYTNIKGQPARLMWSHRDPSLRKSGTGNIFVKNLDKTIDNKALFDTFSM 126
Query: 134 FGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKERE 193
FG+ILSCKVA DE G SK YGFVH+E EE+A ++IEKVNGM L SK V+VG FI + ER
Sbjct: 127 FGNILSCKVATDEFGKSKNYGFVHYEDEESAKEAIEKVNGMQLGSKNVYVGHFIKKSER- 185
Query: 194 KELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDGKSRGFGFVAYESP 253
FTN+Y+KNF + + LK++F PYG ITS ++ +D K+R F F+ Y
Sbjct: 186 ---ATNDTKFTNLYVKNFPDTVTEAHLKQLFSPYGEITSM-IVKSDNKNRKFCFINYSDA 241
Query: 254 EFAEKAVQAWNGKEV--DGKILY 274
+ A A++ NGK++ DGKI Y
Sbjct: 242 DSARNAMENLNGKKITEDGKIDY 264
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 58/131 (44%), Positives = 77/131 (58%), Gaps = 15/131 (11%)
Query: 180 IVFVGKFIPRKEREKELGEKAKLFT------------NVYIKNFGEDFNDEKLKEMFEPY 227
I++VG R R L KAK T N+YIKN + ND+ LKE+FEPY
Sbjct: 373 ILYVGPHQSRARRHAIL--KAKFDTLNTESRNKHPGVNLYIKNLDDSMNDQTLKELFEPY 430
Query: 228 GTITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQ 286
GTITS +VM +D +S+GFGFV + + E A KAV + K ++GK LYVG A+K+ R
Sbjct: 431 GTITSAKVMKDDKDQSKGFGFVCFGTHEEANKAVTEMHLKIINGKPLYVGLAEKREHRLS 490
Query: 287 ELKRRFEMLKI 297
L++RF M I
Sbjct: 491 RLQQRFRMNPI 501
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 117/227 (51%), Gaps = 22/227 (9%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
++++ +L + + +Y+ F+ G +LS +V +D S GY +V++ A +++
Sbjct: 15 TASLYVGDLSEDVTEAVLYEIFNTVGHVLSIRVCRDSVTRKSLGYAYVNYHNLADAERAL 74
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N + I + R+ L + N+++KN + +++ L + F +G
Sbjct: 75 DTLNY----TNIKGQPARLMWSHRDPSLRKSGT--GNIFVKNLDKTIDNKALFDTFSMFG 128
Query: 229 TITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQE 287
I S +V ++ GKS+ +GFV YE E A++A++ NG ++ K +YVG KK+ER
Sbjct: 129 NILSCKVATDEFGKSKNYGFVHYEDEESAKEAIEKVNGMQLGSKNVYVGHFIKKSERA-- 186
Query: 288 LKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITS 334
N + NLYVKN D++ + L++ F+P+G ITS
Sbjct: 187 ------------TNDTKFTNLYVKNFPDTVTEAHLKQLFSPYGEITS 221
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 48/65 (73%)
Query: 272 ILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGT 331
ILYVG Q +A R LK +F+ L E N++ GVNLY+KNLDDS++D+ L++ F P+GT
Sbjct: 373 ILYVGPHQSRARRHAILKAKFDTLNTESRNKHPGVNLYIKNLDDSMNDQTLKELFEPYGT 432
Query: 332 ITSAK 336
ITSAK
Sbjct: 433 ITSAK 437
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 64/97 (65%), Gaps = 1/97 (1%)
Query: 106 RKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAAN 165
+ GV N++IKNLD S++++ + + F +G+I S KV +D++ SKG+GFV F T E AN
Sbjct: 403 KHPGV-NLYIKNLDDSMNDQTLKELFEPYGTITSAKVMKDDKDQSKGFGFVCFGTHEEAN 461
Query: 166 KSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKL 202
K++ +++ ++N K ++VG R+ R L ++ ++
Sbjct: 462 KAVTEMHLKIINGKPLYVGLAEKREHRLSRLQQRFRM 498
>gi|13365525|dbj|BAB39136.1| poly(A)-binding protein [Carassius auratus]
Length = 154
Score = 233 bits (593), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 115/154 (74%), Positives = 129/154 (83%), Gaps = 2/154 (1%)
Query: 97 MWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFV 156
MWSQRDPSLRKSGVGN+FIKNLDKSIDNKA+YDTFSAFG+ILSCKV DE G SKGYGFV
Sbjct: 1 MWSQRDPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYGFV 59
Query: 157 HFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFN 216
HFET EAA ++IEK+NGMLLN + VFVG+F RKERE E+G +AK FTNVYIKNFGED
Sbjct: 60 HFETHEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAEMGARAKEFTNVYIKNFGEDME 119
Query: 217 DEKLKEMFEPYGTITSYRVMNND-GKSRGFGFVA 249
DEKL+E+F +G S RVM +D GKSR FGFV
Sbjct: 120 DEKLREIFSKFGPALSIRVMTDDGGKSRSFGFVC 153
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 79/132 (59%), Gaps = 10/132 (7%)
Query: 205 NVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWN 264
N++IKN + +++ L + F +G I S +V+ ++ S+G+GFV +E+ E AE+A++ N
Sbjct: 16 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETHEAAERAIEKMN 75
Query: 265 GKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRK 324
G ++ + ++VGR + + ER E+ R + + N+Y+KN + ++DE+LR+
Sbjct: 76 GMLLNDRKVFVGRFKSRKEREAEMGARAK----------EFTNVYIKNFGEDMEDEKLRE 125
Query: 325 EFTPFGTITSAK 336
F+ FG S +
Sbjct: 126 IFSKFGPALSIR 137
>gi|82595449|ref|XP_725855.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23481012|gb|EAA17420.1| polyA binding protein-related [Plasmodium yoelii yoelii]
Length = 859
Score = 232 bits (592), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 113/203 (55%), Positives = 147/203 (72%), Gaps = 7/203 (3%)
Query: 74 MLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSA 133
+ D ERALDT+N+ +KG+P R+MWS RDPSLRKSG GN+F+KNLDK+IDNKA++DTFS
Sbjct: 67 LADAERALDTLNYTNIKGQPARLMWSHRDPSLRKSGTGNIFVKNLDKTIDNKALFDTFSM 126
Query: 134 FGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKERE 193
FG+ILSCKVA DE G SK YGFVH+E EE+A ++IEKVNGM L SK V+VG FI + ER
Sbjct: 127 FGNILSCKVATDEFGKSKNYGFVHYEDEESAKEAIEKVNGMQLGSKNVYVGHFIKKSER- 185
Query: 194 KELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDGKSRGFGFVAYESP 253
FTN+Y+KNF + + LK++F PYG ITS ++ +D K+R F F+ Y
Sbjct: 186 ---ATNDTKFTNLYVKNFPDTVTEAHLKQLFSPYGEITSM-IVKSDNKNRKFCFINYSDA 241
Query: 254 EFAEKAVQAWNGKEV--DGKILY 274
+ A A++ NGK++ DGKI Y
Sbjct: 242 DSARNAMENLNGKKITEDGKIDY 264
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 58/131 (44%), Positives = 78/131 (59%), Gaps = 15/131 (11%)
Query: 180 IVFVGKFIPRKEREKELGEKAKLFT------------NVYIKNFGEDFNDEKLKEMFEPY 227
I++VG R R L KAK T N+YIKN + ND+ LKE+FEPY
Sbjct: 376 ILYVGPHQSRARRHAIL--KAKFDTLNTESRNKHPGVNLYIKNLDDSMNDQTLKELFEPY 433
Query: 228 GTITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQ 286
GTITS +VM +D +S+GFGFV + + E A KAV + K ++GK LYVG A+K+ +R
Sbjct: 434 GTITSAKVMKDDKDQSKGFGFVCFGTHEEANKAVTEMHLKIINGKPLYVGLAEKREQRLS 493
Query: 287 ELKRRFEMLKI 297
L++RF M I
Sbjct: 494 RLQQRFRMHPI 504
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 117/227 (51%), Gaps = 22/227 (9%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
++++ +L + + +Y+ F+ G +LS +V +D S GY +V++ A +++
Sbjct: 15 TASLYVGDLSEDVTEAVLYEIFNTVGHVLSIRVCRDSVTRKSLGYAYVNYHNLADAERAL 74
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N + I + R+ L + N+++KN + +++ L + F +G
Sbjct: 75 DTLNY----TNIKGQPARLMWSHRDPSLRKSGT--GNIFVKNLDKTIDNKALFDTFSMFG 128
Query: 229 TITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQE 287
I S +V ++ GKS+ +GFV YE E A++A++ NG ++ K +YVG KK+ER
Sbjct: 129 NILSCKVATDEFGKSKNYGFVHYEDEESAKEAIEKVNGMQLGSKNVYVGHFIKKSERA-- 186
Query: 288 LKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITS 334
N + NLYVKN D++ + L++ F+P+G ITS
Sbjct: 187 ------------TNDTKFTNLYVKNFPDTVTEAHLKQLFSPYGEITS 221
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 48/65 (73%)
Query: 272 ILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGT 331
ILYVG Q +A R LK +F+ L E N++ GVNLY+KNLDDS++D+ L++ F P+GT
Sbjct: 376 ILYVGPHQSRARRHAILKAKFDTLNTESRNKHPGVNLYIKNLDDSMNDQTLKELFEPYGT 435
Query: 332 ITSAK 336
ITSAK
Sbjct: 436 ITSAK 440
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 65/97 (67%), Gaps = 1/97 (1%)
Query: 106 RKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAAN 165
+ GV N++IKNLD S++++ + + F +G+I S KV +D++ SKG+GFV F T E AN
Sbjct: 406 KHPGV-NLYIKNLDDSMNDQTLKELFEPYGTITSAKVMKDDKDQSKGFGFVCFGTHEEAN 464
Query: 166 KSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKL 202
K++ +++ ++N K ++VG R++R L ++ ++
Sbjct: 465 KAVTEMHLKIINGKPLYVGLAEKREQRLSRLQQRFRM 501
>gi|402697295|gb|AFQ90835.1| polyA-binding protein cytoplasmic 1, partial [Sternotherus minor]
Length = 175
Score = 231 bits (590), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 118/176 (67%), Positives = 141/176 (80%), Gaps = 2/176 (1%)
Query: 116 KNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGML 175
KNLDKSJDNKA+YD FSAFG+ILSCKV DE G SKGYGFVHFET+EAA ++IEK+NGML
Sbjct: 1 KNLDKSJDNKALYDXFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGML 59
Query: 176 LNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRV 235
LN + VFVG+F RKERE LG +AK FTNVYIKNFGED +DE+LKE+F +G S +V
Sbjct: 60 LNDRKVFVGRFKSRKEREAXLGARAKEFTNVYIKNFGEDMDDERLKELFGXFGPALSVKV 119
Query: 236 MNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKR 290
M ++ GKS+GFGFV++E E A+KAV NGKE +GK +YV RAQKK ER ELKR
Sbjct: 120 MTDESGKSKGFGFVSFERHEDAQKAVXEMNGKEXNGKQIYVXRAQKKVERQTELKR 175
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 69/126 (54%), Gaps = 6/126 (4%)
Query: 77 TERALDTMNFDALKGRPIRI----MWSQRDPSL--RKSGVGNVFIKNLDKSIDNKAMYDT 130
ERA++ MN L R + + +R+ L R NV+IKN + +D++ + +
Sbjct: 48 AERAIEKMNGMLLNDRKVFVGRFKSRKEREAXLGARAKEFTNVYIKNFGEDMDDERLKEL 107
Query: 131 FSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRK 190
F FG LS KV DE G SKG+GFV FE E A K++ ++NG N K ++V + +
Sbjct: 108 FGXFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKAVXEMNGKEXNGKQIYVXRAQKKV 167
Query: 191 EREKEL 196
ER+ EL
Sbjct: 168 ERQTEL 173
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 72/128 (56%), Gaps = 10/128 (7%)
Query: 209 KNFGEDFNDEKLKEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEV 268
KN + +++ L + F +G I S +V+ ++ S+G+GFV +E+ E AE+A++ NG +
Sbjct: 1 KNLDKSJDNKALYDXFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNGMLL 60
Query: 269 DGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTP 328
+ + ++VGR + + ER L R + N+Y+KN + +DDERL++ F
Sbjct: 61 NDRKVFVGRFKSRKEREAXLGARAKEF----------TNVYIKNFGEDMDDERLKELFGX 110
Query: 329 FGTITSAK 336
FG S K
Sbjct: 111 FGPALSVK 118
>gi|221061487|ref|XP_002262313.1| polyadenylate-binding protein [Plasmodium knowlesi strain H]
gi|193811463|emb|CAQ42191.1| polyadenylate-binding protein, putative [Plasmodium knowlesi strain
H]
Length = 874
Score = 231 bits (588), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 113/201 (56%), Positives = 146/201 (72%), Gaps = 7/201 (3%)
Query: 74 MLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSA 133
+ D ERALDT+N+ +KG+P R+MWS RDPSLRKSG GN+F+KNLDKSIDNKA++DTFS
Sbjct: 67 LADAERALDTLNYTNIKGQPARLMWSHRDPSLRKSGAGNIFVKNLDKSIDNKALFDTFSM 126
Query: 134 FGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKERE 193
FG+ILSCKVA DE G SK YGFVH+E EE+A ++IEKVNG+ L SK V+VG FI R ER
Sbjct: 127 FGNILSCKVATDEFGKSKSYGFVHYEDEESAKEAIEKVNGIQLGSKNVYVGHFIKRSER- 185
Query: 194 KELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDGKSRGFGFVAYESP 253
FTN+Y+KNF + + LK++F PYG ITS ++ D K+R F F+ Y
Sbjct: 186 ---ATNDTKFTNLYVKNFPDSVTEAHLKQLFSPYGEITSM-IVKTDNKNRKFCFINYADS 241
Query: 254 EFAEKAVQAWNGKEV--DGKI 272
E A+ A++ NGK++ DG+I
Sbjct: 242 ESAKNAMENLNGKKITDDGQI 262
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/131 (42%), Positives = 76/131 (58%), Gaps = 15/131 (11%)
Query: 180 IVFVGKFIPRKEREKELGEKAKL------------FTNVYIKNFGEDFNDEKLKEMFEPY 227
I++VG R R L KAK N+YIKN + +D+ LKE+FEPY
Sbjct: 406 ILYVGPHQSRARRHAIL--KAKFDNLNMESKNKHQGVNLYIKNLDDAIDDQTLKELFEPY 463
Query: 228 GTITSYRVMNNDG-KSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQ 286
GTITS +VM +D +S+GFGFV + E A KAV + K ++GK LYVG A+K+ +R
Sbjct: 464 GTITSAKVMRDDKEQSKGFGFVCFAQQEEANKAVTEMHLKIINGKPLYVGLAEKREQRLS 523
Query: 287 ELKRRFEMLKI 297
L++RF M I
Sbjct: 524 RLQQRFRMHPI 534
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 116/224 (51%), Gaps = 22/224 (9%)
Query: 113 VFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSIEKV 171
+++ +L++ + +Y+ F+ G + S +V +D S GY +V++ A ++++ +
Sbjct: 18 LYVGDLNEDVTEAVLYEIFNTVGHVSSIRVCRDSVTRKSLGYAYVNYHNLADAERALDTL 77
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTIT 231
N + + + R+ L + N+++KN + +++ L + F +G I
Sbjct: 78 NYTNIKGQPAR----LMWSHRDPSLRKSGA--GNIFVKNLDKSIDNKALFDTFSMFGNIL 131
Query: 232 SYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKR 290
S +V ++ GKS+ +GFV YE E A++A++ NG ++ K +YVG K++ER
Sbjct: 132 SCKVATDEFGKSKSYGFVHYEDEESAKEAIEKVNGIQLGSKNVYVGHFIKRSERA----- 186
Query: 291 RFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITS 334
N + NLYVKN DS+ + L++ F+P+G ITS
Sbjct: 187 ---------TNDTKFTNLYVKNFPDSVTEAHLKQLFSPYGEITS 221
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/65 (58%), Positives = 50/65 (76%)
Query: 272 ILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGT 331
ILYVG Q +A R LK +F+ L +E N++QGVNLY+KNLDD+IDD+ L++ F P+GT
Sbjct: 406 ILYVGPHQSRARRHAILKAKFDNLNMESKNKHQGVNLYIKNLDDAIDDQTLKELFEPYGT 465
Query: 332 ITSAK 336
ITSAK
Sbjct: 466 ITSAK 470
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 62/91 (68%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
N++IKNLD +ID++ + + F +G+I S KV +D++ SKG+GFV F +E ANK++ ++
Sbjct: 441 NLYIKNLDDAIDDQTLKELFEPYGTITSAKVMRDDKEQSKGFGFVCFAQQEEANKAVTEM 500
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKL 202
+ ++N K ++VG R++R L ++ ++
Sbjct: 501 HLKIINGKPLYVGLAEKREQRLSRLQQRFRM 531
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 60/133 (45%), Gaps = 18/133 (13%)
Query: 206 VYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND--GKSRGFGFVAYESPEFAEKAVQAW 263
+Y+ + ED + L E+F G ++S RV + KS G+ +V Y + AE+A+
Sbjct: 18 LYVGDLNEDVTEAVLYEIFNTVGHVSSIRVCRDSVTRKSLGYAYVNYHNLADAERALDTL 77
Query: 264 NGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLR 323
N + G + R + L + N++VKNLD SID++ L
Sbjct: 78 NYTNIKG----------------QPARLMWSHRDPSLRKSGAGNIFVKNLDKSIDNKALF 121
Query: 324 KEFTPFGTITSAK 336
F+ FG I S K
Sbjct: 122 DTFSMFGNILSCK 134
>gi|194757405|ref|XP_001960955.1| GF11244 [Drosophila ananassae]
gi|190622253|gb|EDV37777.1| GF11244 [Drosophila ananassae]
Length = 307
Score = 231 bits (588), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 118/206 (57%), Positives = 155/206 (75%), Gaps = 10/206 (4%)
Query: 96 IMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGF 155
I+ S P RK ++IKNL++SIDNKA+YDTFS FG+IL+C VA+DE GNS+GYGF
Sbjct: 103 IINSNSTPDSRK-----IYIKNLERSIDNKAVYDTFSVFGNILNCNVAKDEDGNSRGYGF 157
Query: 156 VHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDF 215
VHF+TEEAA +IEKVNGML N++ V V KFIPR++RE+ EKA F N+Y+KN GE+F
Sbjct: 158 VHFDTEEAARAAIEKVNGMLCNNQKVHVVKFIPRRDREQ---EKATHFKNLYVKNLGEEF 214
Query: 216 NDEKLKEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEV-DGKIL 273
++ L+EMFEPYG ITS+++M +D G+SR FGFVAYE+P+ A AV +GK++ D K L
Sbjct: 215 TEQHLREMFEPYGRITSHKLMLDDEGRSRRFGFVAYENPQSALAAVIGLHGKQLGDNKFL 274
Query: 274 YVGRAQKKAERTQELKRRFEMLKIER 299
YV RA KAER QE+ R+ E K ++
Sbjct: 275 YVARALSKAERQQEINRKLEERKRQK 300
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 70/132 (53%), Gaps = 14/132 (10%)
Query: 206 VYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGKSRGFGFVAYESPEFAEKAVQAWN 264
+YIKN +++ + + F +G I + V + DG SRG+GFV +++ E A A++ N
Sbjct: 115 IYIKNLERSIDNKAVYDTFSVFGNILNCNVAKDEDGNSRGYGFVHFDTEEAARAAIEKVN 174
Query: 265 GKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRK 324
G + + ++V + + +R QE F+ NLYVKNL + ++ LR+
Sbjct: 175 GMLCNNQKVHVVKFIPRRDREQEKATHFK-------------NLYVKNLGEEFTEQHLRE 221
Query: 325 EFTPFGTITSAK 336
F P+G ITS K
Sbjct: 222 MFEPYGRITSHK 233
>gi|389586343|dbj|GAB69072.1| polyadenylate-binding protein, partial [Plasmodium cynomolgi strain
B]
Length = 883
Score = 231 bits (588), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 113/201 (56%), Positives = 146/201 (72%), Gaps = 7/201 (3%)
Query: 74 MLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSA 133
+ D ERALDT+N+ +KG+P R+MWS RDPSLRKSG GN+F+KNLDKSIDNKA++DTFS
Sbjct: 67 LADAERALDTLNYTNIKGQPARLMWSHRDPSLRKSGAGNIFVKNLDKSIDNKALFDTFSM 126
Query: 134 FGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKERE 193
FG+ILSCKVA DE G SK YGFVH+E EE+A ++IEKVNG+ L SK V+VG FI + ER
Sbjct: 127 FGNILSCKVATDEFGKSKSYGFVHYEDEESAKEAIEKVNGIQLGSKNVYVGHFIKKSER- 185
Query: 194 KELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDGKSRGFGFVAYESP 253
FTN+Y+KNF + + LKE+F PYG ITS ++ D K+R F F+ Y
Sbjct: 186 ---ATNDTKFTNLYVKNFPDSVTETHLKELFSPYGEITSM-IVKTDNKNRKFCFINYADS 241
Query: 254 EFAEKAVQAWNGKEV--DGKI 272
E A+ A++ NGK++ DG+I
Sbjct: 242 ESAKNAMENLNGKKITDDGQI 262
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/131 (42%), Positives = 76/131 (58%), Gaps = 15/131 (11%)
Query: 180 IVFVGKFIPRKEREKELGEKAKL------------FTNVYIKNFGEDFNDEKLKEMFEPY 227
I++VG R R L KAK N+YIKN + +D+ LKE+FEPY
Sbjct: 415 ILYVGPHQSRARRHAIL--KAKFDNLNMESKNKHQGVNLYIKNLDDAIDDQTLKELFEPY 472
Query: 228 GTITSYRVMNNDG-KSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQ 286
GTITS +VM +D +S+GFGFV + E A KAV + K ++GK LYVG A+K+ +R
Sbjct: 473 GTITSAKVMRDDKEQSKGFGFVCFALQEEANKAVTEMHLKIINGKPLYVGLAEKREQRLS 532
Query: 287 ELKRRFEMLKI 297
L++RF M I
Sbjct: 533 RLQQRFRMHPI 543
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 117/227 (51%), Gaps = 22/227 (9%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
++++ +L++ + +Y+ F+ G + S +V +D S GY +V++ A +++
Sbjct: 15 TASLYVGDLNEDVTEAVLYEIFNTVGHVSSIRVCRDSVTRKSLGYAYVNYHNLADAERAL 74
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N + I + R+ L + N+++KN + +++ L + F +G
Sbjct: 75 DTLNY----TNIKGQPARLMWSHRDPSLRKSGA--GNIFVKNLDKSIDNKALFDTFSMFG 128
Query: 229 TITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQE 287
I S +V ++ GKS+ +GFV YE E A++A++ NG ++ K +YVG KK+ER
Sbjct: 129 NILSCKVATDEFGKSKSYGFVHYEDEESAKEAIEKVNGIQLGSKNVYVGHFIKKSERA-- 186
Query: 288 LKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITS 334
N + NLYVKN DS+ + L++ F+P+G ITS
Sbjct: 187 ------------TNDTKFTNLYVKNFPDSVTETHLKELFSPYGEITS 221
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/65 (58%), Positives = 50/65 (76%)
Query: 272 ILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGT 331
ILYVG Q +A R LK +F+ L +E N++QGVNLY+KNLDD+IDD+ L++ F P+GT
Sbjct: 415 ILYVGPHQSRARRHAILKAKFDNLNMESKNKHQGVNLYIKNLDDAIDDQTLKELFEPYGT 474
Query: 332 ITSAK 336
ITSAK
Sbjct: 475 ITSAK 479
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 62/91 (68%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
N++IKNLD +ID++ + + F +G+I S KV +D++ SKG+GFV F +E ANK++ ++
Sbjct: 450 NLYIKNLDDAIDDQTLKELFEPYGTITSAKVMRDDKEQSKGFGFVCFALQEEANKAVTEM 509
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKL 202
+ ++N K ++VG R++R L ++ ++
Sbjct: 510 HLKIINGKPLYVGLAEKREQRLSRLQQRFRM 540
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 61/133 (45%), Gaps = 18/133 (13%)
Query: 206 VYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND--GKSRGFGFVAYESPEFAEKAVQAW 263
+Y+ + ED + L E+F G ++S RV + KS G+ +V Y + AE+A+
Sbjct: 18 LYVGDLNEDVTEAVLYEIFNTVGHVSSIRVCRDSVTRKSLGYAYVNYHNLADAERALDTL 77
Query: 264 NGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLR 323
N + G+ + + + L + N++VKNLD SID++ L
Sbjct: 78 NYTNIKGQPARLMWSHRDPS----------------LRKSGAGNIFVKNLDKSIDNKALF 121
Query: 324 KEFTPFGTITSAK 336
F+ FG I S K
Sbjct: 122 DTFSMFGNILSCK 134
>gi|357440279|ref|XP_003590417.1| Polyadenylate-binding protein [Medicago truncatula]
gi|355479465|gb|AES60668.1| Polyadenylate-binding protein [Medicago truncatula]
Length = 591
Score = 229 bits (585), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 117/259 (45%), Positives = 169/259 (65%), Gaps = 7/259 (2%)
Query: 79 RALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSIL 138
RA++ N +L G+ IR+MW RD RKSG GNVF+KNL SIDN ++D F +G+IL
Sbjct: 71 RAIELKNHSSLNGKVIRVMWLSRDADARKSGKGNVFVKNLAASIDNVGLHDLFQKYGNIL 130
Query: 139 SCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGE 198
S K+A+ E G SKG+G++ F++EE+AN +I+K+NG + K ++VGKFI + ER L +
Sbjct: 131 SSKIARSEDGKSKGFGYIQFDSEESANVAIQKMNGSTVRDKQIYVGKFIRKSER--SLPD 188
Query: 199 KAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAE 257
FTN+Y+KN ++ L E F +G I S + ++ G+S+GFGFV Y+SP+ A
Sbjct: 189 LDAKFTNLYVKNLDPVVTEKHLGEKFSSFGKIVSLAIKKDENGQSKGFGFVNYDSPDDAR 248
Query: 258 KAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSI 317
+A++A +G + KILYV RAQKK ER Q L F +E+ ++ G N+YVKN+D S+
Sbjct: 249 RAMEAMDGSQFGSKILYVARAQKKVEREQILHHLF----VEKGLKHMGSNIYVKNIDTSV 304
Query: 318 DDERLRKEFTPFGTITSAK 336
DE LR F+ G + SAK
Sbjct: 305 GDEELRDHFSACGEVLSAK 323
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 74/239 (30%), Positives = 132/239 (55%), Gaps = 23/239 (9%)
Query: 99 SQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQ-GNSKGYGFVH 157
S++D ++ S +++ +L + + +Y FS F +++S +V +D G S YG+V+
Sbjct: 4 SEKD-AVPASPAATLYVGDLHSDVTDAQLYKAFSEFNTLISARVCKDSATGKSLCYGYVN 62
Query: 158 FETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFND 217
+ + A ++IE N LN K++ V ++ R ++ G+ NV++KN ++
Sbjct: 63 LSSHQEAIRAIELKNHSSLNGKVIRV-MWLSRDADARKSGK-----GNVFVKNLAASIDN 116
Query: 218 EKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVG 276
L ++F+ YG I S ++ + DGKS+GFG++ ++S E A A+Q NG V K +YVG
Sbjct: 117 VGLHDLFQKYGNILSSKIARSEDGKSKGFGYIQFDSEESANVAIQKMNGSTVRDKQIYVG 176
Query: 277 RAQKKAERT-QELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITS 334
+ +K+ER+ +L +F NLYVKNLD + ++ L ++F+ FG I S
Sbjct: 177 KFIRKSERSLPDLDAKF-------------TNLYVKNLDPVVTEKHLGEKFSSFGKIVS 222
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 58/162 (35%), Positives = 101/162 (62%), Gaps = 7/162 (4%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
N+++KNLD + K + + FS+FG I+S + +DE G SKG+GFV++++ + A +++E +
Sbjct: 195 NLYVKNLDPVVTEKHLGEKFSSFGKIVSLAIKKDENGQSKGFGFVNYDSPDDARRAMEAM 254
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELG----EKA--KLFTNVYIKNFGEDFNDEKLKEMFE 225
+G SKI++V + + ERE+ L EK + +N+Y+KN DE+L++ F
Sbjct: 255 DGSQFGSKILYVARAQKKVEREQILHHLFVEKGLKHMGSNIYVKNIDTSVGDEELRDHFS 314
Query: 226 PYGTITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGK 266
G + S +VM +D G S+GFGFV + + A K++ +NG+
Sbjct: 315 ACGEVLSAKVMRDDKGTSKGFGFVCFSTVVEAFKSMSCFNGE 356
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 61/113 (53%), Gaps = 14/113 (12%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQR-------------DPSLRKSGVGNVFIKNLDKSI 122
D RA++ M+ + + + +Q+ + L+ G N+++KN+D S+
Sbjct: 246 DARRAMEAMDGSQFGSKILYVARAQKKVEREQILHHLFVEKGLKHMG-SNIYVKNIDTSV 304
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGML 175
++ + D FSA G +LS KV +D++G SKG+GFV F T A KS+ NG L
Sbjct: 305 GDEELRDHFSACGEVLSAKVMRDDKGTSKGFGFVCFSTVVEAFKSMSCFNGEL 357
>gi|414588969|tpg|DAA39540.1| TPA: hypothetical protein ZEAMMB73_983793 [Zea mays]
Length = 281
Score = 229 bits (584), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 112/190 (58%), Positives = 144/190 (75%), Gaps = 3/190 (1%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D RAL+ +NF + G+PIRIM+S RDPS RKSG GN+FIKNLDKSIDNKA+YDTF AFG
Sbjct: 88 DAARALELLNFTPINGKPIRIMYSNRDPSSRKSGTGNIFIKNLDKSIDNKALYDTFCAFG 147
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILSCK+A D G S+GYGFV FE +E+A +I+K+NGML+N K VFVG F+ +++RE
Sbjct: 148 NILSCKIATDPSGESRGYGFVQFEKDESAQSAIDKLNGMLINDKKVFVGPFVRKQDREN- 206
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPE 254
+ K F+NVY+KN + D++LKEMF YGTITS VM ++DGKSR FGFV +E+ +
Sbjct: 207 VSSNIK-FSNVYVKNLSDTVTDDELKEMFGKYGTITSAVVMRDSDGKSRCFGFVNFENAD 265
Query: 255 FAEKAVQAWN 264
A +AVQ N
Sbjct: 266 AAAQAVQELN 275
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 123/226 (54%), Gaps = 20/226 (8%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQD-EQGNSKGYGFVHFETEEAANKSIEK 170
++++ +L +S+ + ++D FS G ++S +V +D S GY +V++ + A +++E
Sbjct: 36 SLYVGDLHESVQDAQLFDVFSQVGGVVSVRVCRDINSRKSLGYAYVNYNNQGDAARALEL 95
Query: 171 VNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTI 230
+N +N K + + + R ++ G N++IKN + +++ L + F +G I
Sbjct: 96 LNFTPINGKPIRI-MYSNRDPSSRKSGTG-----NIFIKNLDKSIDNKALYDTFCAFGNI 149
Query: 231 TSYRVMNN-DGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELK 289
S ++ + G+SRG+GFV +E E A+ A+ NG ++ K ++VG +K +R + +
Sbjct: 150 LSCKIATDPSGESRGYGFVQFEKDESAQSAIDKLNGMLINDKKVFVGPFVRKQDR-ENVS 208
Query: 290 RRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSA 335
+ N+YVKNL D++ D+ L++ F +GTITSA
Sbjct: 209 SNIKF-----------SNVYVKNLSDTVTDDELKEMFGKYGTITSA 243
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 65/139 (46%), Gaps = 26/139 (18%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMN--NDGKSRGFGFVAYESPEFAEKAVQ 261
T++Y+ + E D +L ++F G + S RV N KS G+ +V Y + A +A++
Sbjct: 35 TSLYVGDLHESVQDAQLFDVFSQVGGVVSVRVCRDINSRKSLGYAYVNYNNQGDAARALE 94
Query: 262 AWNGKEVDGK---ILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGV-NLYVKNLDDSI 317
N ++GK I+Y R + +R G N+++KNLD SI
Sbjct: 95 LLNFTPINGKPIRIMYSNR--------------------DPSSRKSGTGNIFIKNLDKSI 134
Query: 318 DDERLRKEFTPFGTITSAK 336
D++ L F FG I S K
Sbjct: 135 DNKALYDTFCAFGNILSCK 153
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 45/67 (67%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV++KNL ++ + + + F +G+I S V +D G S+ +GFV+FE +AA ++++++
Sbjct: 215 NVYVKNLSDTVTDDELKEMFGKYGTITSAVVMRDSDGKSRCFGFVNFENADAAAQAVQEL 274
Query: 172 NGMLLNS 178
N +++S
Sbjct: 275 NDGVVSS 281
>gi|289740845|gb|ADD19170.1| polyadenylate-binding protein [Glossina morsitans morsitans]
Length = 321
Score = 229 bits (583), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 110/190 (57%), Positives = 150/190 (78%), Gaps = 4/190 (2%)
Query: 111 GNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEK 170
G ++IKNL++SIDNKA+YDTFSAFG+IL+C VA+DE GNS+GYGFV F++EEAA +IEK
Sbjct: 128 GKIYIKNLERSIDNKAVYDTFSAFGNILNCNVAKDEHGNSRGYGFVQFDSEEAARAAIEK 187
Query: 171 VNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTI 230
VNG+L NS+ V V K+IPR++RE+ EKA F N+Y+KNF EDF+++ +KEMFEPYG I
Sbjct: 188 VNGILCNSQKVHVVKYIPRRDREQ---EKATQFRNLYVKNFNEDFSEQNMKEMFEPYGRI 244
Query: 231 TSYRVMNN-DGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELK 289
TS+++M + +G+S+ FGFVA+E+P+ A AV A NGK++ K LYV RA K ER QE+
Sbjct: 245 TSHKIMTDEEGRSKRFGFVAFENPQSALAAVIALNGKQLGDKYLYVARALSKIERQQEIN 304
Query: 290 RRFEMLKIER 299
R+ E K ++
Sbjct: 305 RKLEERKRQK 314
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 70/132 (53%), Gaps = 14/132 (10%)
Query: 206 VYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWN 264
+YIKN +++ + + F +G I + V ++ G SRG+GFV ++S E A A++ N
Sbjct: 130 IYIKNLERSIDNKAVYDTFSAFGNILNCNVAKDEHGNSRGYGFVQFDSEEAARAAIEKVN 189
Query: 265 GKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRK 324
G + + ++V + + +R QE +F NLYVKN ++ ++ +++
Sbjct: 190 GILCNSQKVHVVKYIPRRDREQEKATQFR-------------NLYVKNFNEDFSEQNMKE 236
Query: 325 EFTPFGTITSAK 336
F P+G ITS K
Sbjct: 237 MFEPYGRITSHK 248
>gi|14906166|gb|AAK72507.1| putative polyadenylate-binding protein [Aedes aegypti]
Length = 289
Score = 229 bits (583), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 113/140 (80%), Positives = 124/140 (88%), Gaps = 1/140 (0%)
Query: 198 EKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAE 257
EKAKLFTNVY+K+FG++ NDE LKEMFE YGTITS+RVM DGK RGFGFVA+E+PE AE
Sbjct: 1 EKAKLFTNVYVKDFGDELNDETLKEMFEKYGTITSHRVMIKDGKGRGFGFVAFENPESAE 60
Query: 258 KAVQAWNGKEV-DGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDS 316
AVQ NGKE+ +GKILYVGRAQKK ER ELKRRFE LK+ERL RYQGVNLYVKNLDDS
Sbjct: 61 HAVQELNGKELGEGKILYVGRAQKKNERQMELKRRFEQLKMERLTRYQGVNLYVKNLDDS 120
Query: 317 IDDERLRKEFTPFGTITSAK 336
IDDERLRKEF+PFGTITSAK
Sbjct: 121 IDDERLRKEFSPFGTITSAK 140
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 67/193 (34%), Positives = 114/193 (59%), Gaps = 13/193 (6%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV++K+ ++++ + + F +G+I S +V + G +G+GFV FE E+A +++++
Sbjct: 8 NVYVKDFGDELNDETLKEMFEKYGTITSHRVMIKD-GKGRGFGFVAFENPESAEHAVQEL 66
Query: 172 NGMLLN-SKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKL 220
NG L KI++VG+ + ER+ EL + + N+Y+KN + +DE+L
Sbjct: 67 NGKELGEGKILYVGRAQKKNERQMELKRRFEQLKMERLTRYQGVNLYVKNLDDSIDDERL 126
Query: 221 KEMFEPYGTITSYRVMNNDGKSRGFGFVAY-ESPEFAEKAVQAWNGKEVDGKILYVGRAQ 279
++ F P+GTITS +VM +G+S+GFGFV + + E A KAV NG+ V K LYV AQ
Sbjct: 127 RKEFSPFGTITSAKVMLEEGRSKGFGFVLFSQHAEEATKAVTEMNGRIVGSKPLYVALAQ 186
Query: 280 KKAERTQELKRRF 292
+ +R L ++
Sbjct: 187 RTEDRKAHLASQY 199
>gi|156103277|ref|XP_001617331.1| polyadenylate-binding protein [Plasmodium vivax Sal-1]
gi|148806205|gb|EDL47604.1| polyadenylate-binding protein, putative [Plasmodium vivax]
Length = 883
Score = 228 bits (582), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 111/201 (55%), Positives = 146/201 (72%), Gaps = 7/201 (3%)
Query: 74 MLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSA 133
+ D ERALDT+N+ +KG+P R+MWS RDPSLRKSG GN+F+KNLDKSIDNKA++DTFS
Sbjct: 67 LADAERALDTLNYTNIKGQPARLMWSHRDPSLRKSGAGNIFVKNLDKSIDNKALFDTFSM 126
Query: 134 FGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKERE 193
FG+ILSCKVA DE G SK YGFVH+E EE+A ++IEKVNG+ L SK V+VG FI + ER
Sbjct: 127 FGNILSCKVATDEFGKSKSYGFVHYEDEESAKEAIEKVNGIQLGSKNVYVGHFIKKSER- 185
Query: 194 KELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDGKSRGFGFVAYESP 253
FTN+Y+KNF + + LK++F P+G ITS ++ D K+R F F+ Y
Sbjct: 186 ---ATNDTKFTNLYVKNFPDSVTEAHLKQLFSPFGEITSM-IVKTDNKNRKFCFINYADS 241
Query: 254 EFAEKAVQAWNGKEV--DGKI 272
E A+ A++ NGK++ DG+I
Sbjct: 242 ESAKNAMENLNGKKITDDGQI 262
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 117/227 (51%), Gaps = 22/227 (9%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
++++ +L++ + +Y+ F+ G + S +V +D S GY +V++ A +++
Sbjct: 15 TASLYVGDLNEDVTEAVLYEIFNTVGHVSSIRVCRDSVTRKSLGYAYVNYHNLADAERAL 74
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N + + + R+ L + N+++KN + +++ L + F +G
Sbjct: 75 DTLNYTNIKGQPAR----LMWSHRDPSLRKSGA--GNIFVKNLDKSIDNKALFDTFSMFG 128
Query: 229 TITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQE 287
I S +V ++ GKS+ +GFV YE E A++A++ NG ++ K +YVG KK+ER
Sbjct: 129 NILSCKVATDEFGKSKSYGFVHYEDEESAKEAIEKVNGIQLGSKNVYVGHFIKKSERA-- 186
Query: 288 LKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITS 334
N + NLYVKN DS+ + L++ F+PFG ITS
Sbjct: 187 ------------TNDTKFTNLYVKNFPDSVTEAHLKQLFSPFGEITS 221
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 55/131 (41%), Positives = 76/131 (58%), Gaps = 15/131 (11%)
Query: 180 IVFVGKFIPRKEREKELGEKAKL------------FTNVYIKNFGEDFNDEKLKEMFEPY 227
I++VG R R L KAK N+YIKN + +D+ LKE+FEPY
Sbjct: 415 ILYVGPHQSRARRHAIL--KAKFDNLNMESKNKHQGVNLYIKNLDDAIDDQTLKELFEPY 472
Query: 228 GTITSYRVMNNDG-KSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQ 286
GTITS +VM +D +S+GFGFV + E A +AV + K ++GK LYVG A+K+ +R
Sbjct: 473 GTITSAKVMRDDKEQSKGFGFVCFALQEEANRAVTEMHLKIINGKPLYVGLAEKREQRLS 532
Query: 287 ELKRRFEMLKI 297
L++RF M I
Sbjct: 533 RLQQRFRMHPI 543
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/65 (58%), Positives = 50/65 (76%)
Query: 272 ILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGT 331
ILYVG Q +A R LK +F+ L +E N++QGVNLY+KNLDD+IDD+ L++ F P+GT
Sbjct: 415 ILYVGPHQSRARRHAILKAKFDNLNMESKNKHQGVNLYIKNLDDAIDDQTLKELFEPYGT 474
Query: 332 ITSAK 336
ITSAK
Sbjct: 475 ITSAK 479
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 62/92 (67%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
N++IKNLD +ID++ + + F +G+I S KV +D++ SKG+GFV F +E AN+++ ++
Sbjct: 450 NLYIKNLDDAIDDQTLKELFEPYGTITSAKVMRDDKEQSKGFGFVCFALQEEANRAVTEM 509
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLF 203
+ ++N K ++VG R++R L ++ ++
Sbjct: 510 HLKIINGKPLYVGLAEKREQRLSRLQQRFRMH 541
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 60/133 (45%), Gaps = 18/133 (13%)
Query: 206 VYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND--GKSRGFGFVAYESPEFAEKAVQAW 263
+Y+ + ED + L E+F G ++S RV + KS G+ +V Y + AE+A+
Sbjct: 18 LYVGDLNEDVTEAVLYEIFNTVGHVSSIRVCRDSVTRKSLGYAYVNYHNLADAERALDTL 77
Query: 264 NGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLR 323
N + G + R + L + N++VKNLD SID++ L
Sbjct: 78 NYTNIKG----------------QPARLMWSHRDPSLRKSGAGNIFVKNLDKSIDNKALF 121
Query: 324 KEFTPFGTITSAK 336
F+ FG I S K
Sbjct: 122 DTFSMFGNILSCK 134
>gi|124806145|ref|XP_001350640.1| polyadenylate-binding protein, putative [Plasmodium falciparum 3D7]
gi|23496765|gb|AAN36320.1|AE014847_47 polyadenylate-binding protein, putative [Plasmodium falciparum 3D7]
gi|119352249|gb|ABL63812.1| polyadenylate-binding protein [Plasmodium falciparum]
Length = 875
Score = 228 bits (580), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 111/201 (55%), Positives = 145/201 (72%), Gaps = 7/201 (3%)
Query: 74 MLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSA 133
+ D ERALDT+N+ +KG+P R+MWS RDPSLRKSG GN+F+KNLDKSIDNKA++DTFS
Sbjct: 67 LADAERALDTLNYTNIKGQPARLMWSHRDPSLRKSGTGNIFVKNLDKSIDNKALFDTFSM 126
Query: 134 FGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKERE 193
FG+ILSCKVA DE G SK YGFVH+E EE+A ++IEKVNG+ L SK V+VG FI + ER
Sbjct: 127 FGNILSCKVATDEFGKSKSYGFVHYEDEESAKEAIEKVNGVQLGSKNVYVGPFIKKSER- 185
Query: 194 KELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDGKSRGFGFVAYESP 253
FTN+Y+KNF + + L+++F PYG ITS ++ D K+R F F+ Y
Sbjct: 186 ---ATNDTKFTNLYVKNFPDSVTETHLRQLFNPYGEITSM-IVKMDNKNRKFCFINYADA 241
Query: 254 EFAEKAVQAWNGKEV--DGKI 272
E A+ A+ NGK++ DG+I
Sbjct: 242 ESAKNAMDNLNGKKITDDGQI 262
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 116/227 (51%), Gaps = 22/227 (9%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
++++ +L++ + +Y+ F+ G + S +V +D S GY +V++ A +++
Sbjct: 15 TASLYVGDLNEDVTEAVLYEIFNTVGHVSSIRVCRDSVTRKSLGYAYVNYHNLADAERAL 74
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N + I + R+ L + N+++KN + +++ L + F +G
Sbjct: 75 DTLNY----TNIKGQPARLMWSHRDPSLRKSGT--GNIFVKNLDKSIDNKALFDTFSMFG 128
Query: 229 TITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQE 287
I S +V ++ GKS+ +GFV YE E A++A++ NG ++ K +YVG KK+ER
Sbjct: 129 NILSCKVATDEFGKSKSYGFVHYEDEESAKEAIEKVNGVQLGSKNVYVGPFIKKSERA-- 186
Query: 288 LKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITS 334
N + NLYVKN DS+ + LR+ F P+G ITS
Sbjct: 187 ------------TNDTKFTNLYVKNFPDSVTETHLRQLFNPYGEITS 221
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/129 (40%), Positives = 74/129 (57%), Gaps = 11/129 (8%)
Query: 180 IVFVGKFIPRKEREKELGEKAKLFT----------NVYIKNFGEDFNDEKLKEMFEPYGT 229
I++VG R R L K N+YIKN + +D L+E+FEP+GT
Sbjct: 416 ILYVGPHQSRARRHAILKAKFDNLNVENKNKHQGVNLYIKNLDDGIDDIMLRELFEPFGT 475
Query: 230 ITSYRVMNNDG-KSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
ITS +VM ++ +S+GFGFV + S E A KAV + K ++GK LYVG A+K+ +R L
Sbjct: 476 ITSAKVMRDEKEQSKGFGFVCFASQEEANKAVTEMHLKIINGKPLYVGLAEKREQRLSRL 535
Query: 289 KRRFEMLKI 297
++RF M I
Sbjct: 536 QQRFRMHPI 544
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/65 (61%), Positives = 48/65 (73%)
Query: 272 ILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGT 331
ILYVG Q +A R LK +F+ L +E N++QGVNLY+KNLDD IDD LR+ F PFGT
Sbjct: 416 ILYVGPHQSRARRHAILKAKFDNLNVENKNKHQGVNLYIKNLDDGIDDIMLRELFEPFGT 475
Query: 332 ITSAK 336
ITSAK
Sbjct: 476 ITSAK 480
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 61/91 (67%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
N++IKNLD ID+ + + F FG+I S KV +DE+ SKG+GFV F ++E ANK++ ++
Sbjct: 451 NLYIKNLDDGIDDIMLRELFEPFGTITSAKVMRDEKEQSKGFGFVCFASQEEANKAVTEM 510
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKL 202
+ ++N K ++VG R++R L ++ ++
Sbjct: 511 HLKIINGKPLYVGLAEKREQRLSRLQQRFRM 541
>gi|297827151|ref|XP_002881458.1| PAB7 binding protein 7 [Arabidopsis lyrata subsp. lyrata]
gi|297327297|gb|EFH57717.1| PAB7 binding protein 7 [Arabidopsis lyrata subsp. lyrata]
Length = 609
Score = 225 bits (573), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 116/262 (44%), Positives = 167/262 (63%), Gaps = 5/262 (1%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D A++ N L G+ IR+MWS R+P R++GVGNVF+KNL +SI N + D F FG
Sbjct: 77 DANLAIEKKNHSLLNGKMIRVMWSVREPDARRNGVGNVFVKNLPESITNAVLQDMFKKFG 136
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+I+SCKVA E G S+GYGFV FE E+AA+ +IEK+N + K ++VGKF+ + +R K
Sbjct: 137 NIVSCKVATFEDGKSRGYGFVQFEQEDAAHAAIEKLNSTTVAGKEIYVGKFMKKTDRAK- 195
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPE 254
+ +TNVY+KN D N++ L+E F +G I S + ++ G +G+ FV ++ PE
Sbjct: 196 ---AEEKYTNVYMKNLDADVNEDLLREKFSEFGKIVSLAIAKDENGLCKGYAFVNFDKPE 252
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A A + NG K LYVGRAQKKAER Q L+ +F+ E++ + + N+YVKN++
Sbjct: 253 DARWAAETMNGTRFGSKCLYVGRAQKKAEREQLLREQFKEKHEEQMMKAKVSNIYVKNIN 312
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
+ +E LRK F+ GTITS K
Sbjct: 313 VGVTEEELRKHFSQCGTITSTK 334
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 84/227 (37%), Positives = 133/227 (58%), Gaps = 15/227 (6%)
Query: 80 ALDTMNFDALKGRPIRI--MWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSI 137
A++ +N + G+ I + + D + + NV++KNLD ++ + + FS FG I
Sbjct: 168 AIEKLNSTTVAGKEIYVGKFMKKTDRAKAEEKYTNVYMKNLDADVNEDLLREKFSEFGKI 227
Query: 138 LSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELG 197
+S +A+DE G KGY FV+F+ E A + E +NG SK ++VG+ + ERE+ L
Sbjct: 228 VSLAIAKDENGLCKGYAFVNFDKPEDARWAAETMNGTRFGSKCLYVGRAQKKAEREQLLR 287
Query: 198 E-----------KAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GKSRGF 245
E KAK+ +N+Y+KN +E+L++ F GTITS ++M ++ GKS+GF
Sbjct: 288 EQFKEKHEEQMMKAKV-SNIYVKNINVGVTEEELRKHFSQCGTITSTKLMCDEKGKSKGF 346
Query: 246 GFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRF 292
GFV + +PE A AV+ ++GK GK LYV AQKK +R +L+ +F
Sbjct: 347 GFVCFSTPEEAIDAVKTFHGKMFHGKPLYVATAQKKEDRKMQLQVQF 393
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 73/227 (32%), Positives = 123/227 (54%), Gaps = 22/227 (9%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQD-EQGNSKGYGFVHFETEEAANKSI 168
++++ +L S+ +YD F+ F S+ S ++ +D G S YG+ +F + + AN +I
Sbjct: 23 TASLYVGDLHPSVTEGILYDAFAEFKSLTSVRLCKDASTGRSLCYGYANFLSRQDANLAI 82
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
EK N LLN K++ V + +E + NV++KN E + L++MF+ +G
Sbjct: 83 EKKNHSLLNGKMIRVMWSV------REPDARRNGVGNVFVKNLPESITNAVLQDMFKKFG 136
Query: 229 TITSYRVMN-NDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQE 287
I S +V DGKSRG+GFV +E + A A++ N V GK +YVG+ KK +R +
Sbjct: 137 NIVSCKVATFEDGKSRGYGFVQFEQEDAAHAAIEKLNSTTVAGKEIYVGKFMKKTDRAKA 196
Query: 288 LKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITS 334
++ N+Y+KNLD ++++ LR++F+ FG I S
Sbjct: 197 EEKY--------------TNVYMKNLDADVNEDLLREKFSEFGKIVS 229
>gi|195121744|ref|XP_002005379.1| GI19109 [Drosophila mojavensis]
gi|193910447|gb|EDW09314.1| GI19109 [Drosophila mojavensis]
Length = 300
Score = 225 bits (573), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 111/189 (58%), Positives = 149/189 (78%), Gaps = 5/189 (2%)
Query: 113 VFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVN 172
++IKNL++SIDNKA+YDTFSAFG+IL+C VA+DE GNS+GYGFVHF++EEAA +IEKVN
Sbjct: 108 IYIKNLERSIDNKAVYDTFSAFGNILNCNVAKDEDGNSRGYGFVHFDSEEAARAAIEKVN 167
Query: 173 GMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITS 232
GML N++ V V KFIPR++RE+ EKA F N+Y+KN E+F ++ L+EMFEPYG ITS
Sbjct: 168 GMLCNNQKVHVVKFIPRRDREQ---EKATHFKNLYVKNLSEEFTEQHLREMFEPYGRITS 224
Query: 233 YRVM-NNDGKSRGFGFVAYESPEFAEKAVQAWNGKEV-DGKILYVGRAQKKAERTQELKR 290
+++M + +G+SR FGFVA+ESP+ A AV +GK++ D K LYV RA KAER QE+ R
Sbjct: 225 HKLMLDEEGRSRRFGFVAFESPQSALAAVIGLHGKQLGDNKFLYVARALSKAERQQEINR 284
Query: 291 RFEMLKIER 299
+ E K ++
Sbjct: 285 KLEERKRQK 293
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 70/132 (53%), Gaps = 14/132 (10%)
Query: 206 VYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGKSRGFGFVAYESPEFAEKAVQAWN 264
+YIKN +++ + + F +G I + V + DG SRG+GFV ++S E A A++ N
Sbjct: 108 IYIKNLERSIDNKAVYDTFSAFGNILNCNVAKDEDGNSRGYGFVHFDSEEAARAAIEKVN 167
Query: 265 GKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRK 324
G + + ++V + + +R QE F+ NLYVKNL + ++ LR+
Sbjct: 168 GMLCNNQKVHVVKFIPRRDREQEKATHFK-------------NLYVKNLSEEFTEQHLRE 214
Query: 325 EFTPFGTITSAK 336
F P+G ITS K
Sbjct: 215 MFEPYGRITSHK 226
>gi|194886456|ref|XP_001976617.1| GG19920 [Drosophila erecta]
gi|190659804|gb|EDV57017.1| GG19920 [Drosophila erecta]
Length = 307
Score = 225 bits (573), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 110/189 (58%), Positives = 148/189 (78%), Gaps = 5/189 (2%)
Query: 113 VFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVN 172
++IKNL++SIDNKA+YDTFS FG+IL+C VA+DE GNS+GYGFVHF++EEAA +IEKVN
Sbjct: 115 IYIKNLERSIDNKAVYDTFSVFGNILNCNVAKDEDGNSRGYGFVHFDSEEAARAAIEKVN 174
Query: 173 GMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITS 232
GML N++ V V KFIPR++RE+ EKA F N+Y+KN E+F ++ L+EMFEPYG ITS
Sbjct: 175 GMLCNNQKVHVVKFIPRRDREQ---EKATHFKNLYVKNLSEEFTEQHLREMFEPYGRITS 231
Query: 233 YRVM-NNDGKSRGFGFVAYESPEFAEKAVQAWNGKEV-DGKILYVGRAQKKAERTQELKR 290
+++M + +G+SR FGFVAYE+P+ A AV +GK++ D K LYV RA KAER QE+ R
Sbjct: 232 HKLMLDEEGRSRRFGFVAYENPQSALAAVIGLHGKQLGDNKFLYVARALSKAERQQEINR 291
Query: 291 RFEMLKIER 299
+ E K ++
Sbjct: 292 KLEERKRQK 300
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 70/132 (53%), Gaps = 14/132 (10%)
Query: 206 VYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGKSRGFGFVAYESPEFAEKAVQAWN 264
+YIKN +++ + + F +G I + V + DG SRG+GFV ++S E A A++ N
Sbjct: 115 IYIKNLERSIDNKAVYDTFSVFGNILNCNVAKDEDGNSRGYGFVHFDSEEAARAAIEKVN 174
Query: 265 GKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRK 324
G + + ++V + + +R QE F+ NLYVKNL + ++ LR+
Sbjct: 175 GMLCNNQKVHVVKFIPRRDREQEKATHFK-------------NLYVKNLSEEFTEQHLRE 221
Query: 325 EFTPFGTITSAK 336
F P+G ITS K
Sbjct: 222 MFEPYGRITSHK 233
>gi|125811664|ref|XP_001361971.1| GA18301 [Drosophila pseudoobscura pseudoobscura]
gi|195171077|ref|XP_002026337.1| GL20391 [Drosophila persimilis]
gi|54637147|gb|EAL26550.1| GA18301 [Drosophila pseudoobscura pseudoobscura]
gi|194111239|gb|EDW33282.1| GL20391 [Drosophila persimilis]
Length = 296
Score = 224 bits (571), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 110/191 (57%), Positives = 149/191 (78%), Gaps = 5/191 (2%)
Query: 111 GNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEK 170
G ++IKNL++SIDNKA+YDTFS FG+IL+C VA+DE GNS+GYGFVHF++EEAA +IEK
Sbjct: 102 GKIYIKNLERSIDNKAVYDTFSVFGNILNCNVAKDEDGNSRGYGFVHFDSEEAARAAIEK 161
Query: 171 VNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTI 230
VNGML N++ V V KFIPR++RE+ EKA F N+Y+KN E+F ++ L+EMFEPYG I
Sbjct: 162 VNGMLCNNQKVHVVKFIPRRDREQ---EKATHFKNLYVKNLSEEFTEQHLREMFEPYGRI 218
Query: 231 TSYRVM-NNDGKSRGFGFVAYESPEFAEKAVQAWNGKEV-DGKILYVGRAQKKAERTQEL 288
TS+++M + +G+SR FGFVA+E+P+ A AV +GK++ D K LYV RA KAER QE+
Sbjct: 219 TSHKLMLDEEGRSRRFGFVAFENPQSALAAVIGLHGKQLGDNKFLYVARALSKAERQQEI 278
Query: 289 KRRFEMLKIER 299
R+ E K ++
Sbjct: 279 NRKLEERKRQK 289
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 70/132 (53%), Gaps = 14/132 (10%)
Query: 206 VYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGKSRGFGFVAYESPEFAEKAVQAWN 264
+YIKN +++ + + F +G I + V + DG SRG+GFV ++S E A A++ N
Sbjct: 104 IYIKNLERSIDNKAVYDTFSVFGNILNCNVAKDEDGNSRGYGFVHFDSEEAARAAIEKVN 163
Query: 265 GKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRK 324
G + + ++V + + +R QE F+ NLYVKNL + ++ LR+
Sbjct: 164 GMLCNNQKVHVVKFIPRRDREQEKATHFK-------------NLYVKNLSEEFTEQHLRE 210
Query: 325 EFTPFGTITSAK 336
F P+G ITS K
Sbjct: 211 MFEPYGRITSHK 222
>gi|19922904|ref|NP_611924.1| CG4612, isoform A [Drosophila melanogaster]
gi|386768569|ref|NP_001246493.1| CG4612, isoform C [Drosophila melanogaster]
gi|195353161|ref|XP_002043074.1| GM11822 [Drosophila sechellia]
gi|195586434|ref|XP_002082979.1| GD24944 [Drosophila simulans]
gi|7291799|gb|AAF47219.1| CG4612, isoform A [Drosophila melanogaster]
gi|16648374|gb|AAL25452.1| LD36772p [Drosophila melanogaster]
gi|194127162|gb|EDW49205.1| GM11822 [Drosophila sechellia]
gi|194194988|gb|EDX08564.1| GD24944 [Drosophila simulans]
gi|220946122|gb|ACL85604.1| CG4612-PA [synthetic construct]
gi|220955844|gb|ACL90465.1| CG4612-PA [synthetic construct]
gi|383302680|gb|AFH08246.1| CG4612, isoform C [Drosophila melanogaster]
Length = 307
Score = 224 bits (571), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 109/183 (59%), Positives = 145/183 (79%), Gaps = 5/183 (2%)
Query: 113 VFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVN 172
++IKNL++SIDNKA+YDTFS FG+IL+C VA+DE GNS+GYGFVHF++EEAA +IEKVN
Sbjct: 115 IYIKNLERSIDNKAVYDTFSVFGNILNCNVAKDEDGNSRGYGFVHFDSEEAARAAIEKVN 174
Query: 173 GMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITS 232
GML N++ V V KFIPR++RE+ EKA F N+Y+KN E+F ++ L+EMFEPYG ITS
Sbjct: 175 GMLCNNQKVHVVKFIPRRDREQ---EKATHFKNLYVKNLSEEFTEQHLREMFEPYGRITS 231
Query: 233 YRVM-NNDGKSRGFGFVAYESPEFAEKAVQAWNGKEV-DGKILYVGRAQKKAERTQELKR 290
+++M + +G+SR FGFVAYE+P+ A AV +GK++ D K LYV RA KAER QE+ R
Sbjct: 232 HKLMLDEEGRSRRFGFVAYENPQSALAAVIGLHGKQLGDNKFLYVARALSKAERQQEINR 291
Query: 291 RFE 293
+ E
Sbjct: 292 KLE 294
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 70/132 (53%), Gaps = 14/132 (10%)
Query: 206 VYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGKSRGFGFVAYESPEFAEKAVQAWN 264
+YIKN +++ + + F +G I + V + DG SRG+GFV ++S E A A++ N
Sbjct: 115 IYIKNLERSIDNKAVYDTFSVFGNILNCNVAKDEDGNSRGYGFVHFDSEEAARAAIEKVN 174
Query: 265 GKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRK 324
G + + ++V + + +R QE F+ NLYVKNL + ++ LR+
Sbjct: 175 GMLCNNQKVHVVKFIPRRDREQEKATHFK-------------NLYVKNLSEEFTEQHLRE 221
Query: 325 EFTPFGTITSAK 336
F P+G ITS K
Sbjct: 222 MFEPYGRITSHK 233
>gi|195489681|ref|XP_002092839.1| GE11444 [Drosophila yakuba]
gi|194178940|gb|EDW92551.1| GE11444 [Drosophila yakuba]
Length = 307
Score = 224 bits (571), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 110/189 (58%), Positives = 148/189 (78%), Gaps = 5/189 (2%)
Query: 113 VFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVN 172
++IKNL++SIDNKA+YDTFS FG+IL+C VA+DE GNS+GYGFVHF++EEAA +IEKVN
Sbjct: 115 IYIKNLERSIDNKAVYDTFSVFGNILNCNVAKDEDGNSRGYGFVHFDSEEAARAAIEKVN 174
Query: 173 GMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITS 232
GML N++ V V KFIPR++RE+ EKA F N+Y+KN E+F ++ L+EMFEPYG ITS
Sbjct: 175 GMLCNNQKVHVVKFIPRRDREQ---EKATHFKNLYVKNLSEEFTEQHLREMFEPYGRITS 231
Query: 233 YRVM-NNDGKSRGFGFVAYESPEFAEKAVQAWNGKEV-DGKILYVGRAQKKAERTQELKR 290
+++M + +G+SR FGFVAYE+P+ A AV +GK++ D K LYV RA KAER QE+ R
Sbjct: 232 HKLMLDEEGRSRRFGFVAYENPQSALAAVIGLHGKQLGDNKFLYVARALSKAERQQEINR 291
Query: 291 RFEMLKIER 299
+ E K ++
Sbjct: 292 KLEERKRQK 300
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 70/132 (53%), Gaps = 14/132 (10%)
Query: 206 VYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGKSRGFGFVAYESPEFAEKAVQAWN 264
+YIKN +++ + + F +G I + V + DG SRG+GFV ++S E A A++ N
Sbjct: 115 IYIKNLERSIDNKAVYDTFSVFGNILNCNVAKDEDGNSRGYGFVHFDSEEAARAAIEKVN 174
Query: 265 GKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRK 324
G + + ++V + + +R QE F+ NLYVKNL + ++ LR+
Sbjct: 175 GMLCNNQKVHVVKFIPRRDREQEKATHFK-------------NLYVKNLSEEFTEQHLRE 221
Query: 325 EFTPFGTITSAK 336
F P+G ITS K
Sbjct: 222 MFEPYGRITSHK 233
>gi|195429621|ref|XP_002062856.1| GK19472 [Drosophila willistoni]
gi|194158941|gb|EDW73842.1| GK19472 [Drosophila willistoni]
Length = 297
Score = 224 bits (571), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 109/183 (59%), Positives = 145/183 (79%), Gaps = 5/183 (2%)
Query: 113 VFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVN 172
++IKNL++SIDNKA+YDTFS FG+IL+C VA+DE GNS+GYGFVHF++EEAA +IEKVN
Sbjct: 105 IYIKNLERSIDNKAVYDTFSVFGNILNCNVAKDEDGNSRGYGFVHFDSEEAARAAIEKVN 164
Query: 173 GMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITS 232
GML N++ V V KFIPR++RE+ EKA F N+Y+KN E+F ++ L+EMFEPYG ITS
Sbjct: 165 GMLCNNQKVHVVKFIPRRDREQ---EKATHFKNLYVKNLSEEFTEQHLREMFEPYGRITS 221
Query: 233 YRVM-NNDGKSRGFGFVAYESPEFAEKAVQAWNGKEV-DGKILYVGRAQKKAERTQELKR 290
+++M + +G+SR FGFVA+ESP+ A AV +GK++ D K LYV RA KAER QE+ R
Sbjct: 222 HKLMLDEEGRSRKFGFVAFESPQSALAAVIGLHGKQLGDNKFLYVARALSKAERQQEINR 281
Query: 291 RFE 293
+ E
Sbjct: 282 KLE 284
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 70/132 (53%), Gaps = 14/132 (10%)
Query: 206 VYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGKSRGFGFVAYESPEFAEKAVQAWN 264
+YIKN +++ + + F +G I + V + DG SRG+GFV ++S E A A++ N
Sbjct: 105 IYIKNLERSIDNKAVYDTFSVFGNILNCNVAKDEDGNSRGYGFVHFDSEEAARAAIEKVN 164
Query: 265 GKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRK 324
G + + ++V + + +R QE F+ NLYVKNL + ++ LR+
Sbjct: 165 GMLCNNQKVHVVKFIPRRDREQEKATHFK-------------NLYVKNLSEEFTEQHLRE 211
Query: 325 EFTPFGTITSAK 336
F P+G ITS K
Sbjct: 212 MFEPYGRITSHK 223
>gi|224059164|ref|XP_002299747.1| predicted protein [Populus trichocarpa]
gi|222847005|gb|EEE84552.1| predicted protein [Populus trichocarpa]
Length = 367
Score = 223 bits (567), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 113/261 (43%), Positives = 170/261 (65%), Gaps = 4/261 (1%)
Query: 77 TERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGS 136
RAL +N LKG+P+RIMW QRDP RK+G N+F+KNLD SI + + FS +G+
Sbjct: 71 ASRALGLLNHTNLKGKPMRIMWCQRDPFARKTGFANLFVKNLDFSISSSCLESIFSKYGT 130
Query: 137 ILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKEL 196
ILSCKVA E G SKG+GFV FE++++A + ++ +L K + V KF+ + ER
Sbjct: 131 ILSCKVA-GENGRSKGFGFVQFESQDSALVAQTALHDTMLGGKKLHVCKFVKKTERTA-- 187
Query: 197 GEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPEF 255
++FTN+Y+KN E ++ LK+MF G ++S +M +++GKS+ FGFV ++SP+
Sbjct: 188 AAPCEVFTNLYVKNLDETITEDGLKDMFSVVGDVSSVAIMMDHEGKSKHFGFVNFKSPDD 247
Query: 256 AEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDD 315
A+KAV NG + K L+VG+AQ+K+ERT LK+ ++ L + + NLYVKNL+
Sbjct: 248 AKKAVDVMNGSVIGSKTLFVGKAQRKSERTMILKQEYKDLHNRSTEKLRASNLYVKNLNV 307
Query: 316 SIDDERLRKEFTPFGTITSAK 336
IDD++L++ F+ +G I S K
Sbjct: 308 DIDDKKLKEVFSAYGKILSVK 328
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 66/168 (39%), Positives = 103/168 (61%), Gaps = 11/168 (6%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
N+++KNLD++I + D FS G + S + D +G SK +GFV+F++ + A K+++ +
Sbjct: 196 NLYVKNLDETITEDGLKDMFSVVGDVSSVAIMMDHEGKSKHFGFVNFKSPDDAKKAVDVM 255
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKLK 221
NG ++ SK +FVGK + ER L ++ K +N+Y+KN D +D+KLK
Sbjct: 256 NGSVIGSKTLFVGKAQRKSERTMILKQEYKDLHNRSTEKLRASNLYVKNLNVDIDDKKLK 315
Query: 222 EMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPEFAEKAVQAWNGKEV 268
E+F YG I S +V+ +NDG S+ FGFV + SPE A KA+ A NG +
Sbjct: 316 EVFSAYGKILSVKVICHNDGTSKQFGFVCFASPEEANKALVALNGHPL 363
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 61/117 (52%), Gaps = 16/117 (13%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQR----------------DPSLRKSGVGNVFIKNLD 119
D ++A+D MN + + + + +QR + S K N+++KNL+
Sbjct: 247 DAKKAVDVMNGSVIGSKTLFVGKAQRKSERTMILKQEYKDLHNRSTEKLRASNLYVKNLN 306
Query: 120 KSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLL 176
ID+K + + FSA+G ILS KV G SK +GFV F + E ANK++ +NG L
Sbjct: 307 VDIDDKKLKEVFSAYGKILSVKVICHNDGTSKQFGFVCFASPEEANKALVALNGHPL 363
>gi|195383760|ref|XP_002050594.1| GJ22239 [Drosophila virilis]
gi|194145391|gb|EDW61787.1| GJ22239 [Drosophila virilis]
Length = 301
Score = 221 bits (563), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 107/183 (58%), Positives = 146/183 (79%), Gaps = 5/183 (2%)
Query: 113 VFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVN 172
++IKNL++SIDNKA+Y+TFS FG+IL+C VA+DE+GNS+GYGFVHF++EEAA +IEKVN
Sbjct: 109 IYIKNLERSIDNKAVYETFSVFGNILNCNVAKDEEGNSRGYGFVHFDSEEAARAAIEKVN 168
Query: 173 GMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITS 232
GML N++ V V KFIPR++RE+ EKA F N+Y+KN E+F ++ L+EMFEPYG ITS
Sbjct: 169 GMLCNNQKVHVVKFIPRRDREQ---EKATHFKNLYVKNLSEEFTEQHLREMFEPYGRITS 225
Query: 233 YRVM-NNDGKSRGFGFVAYESPEFAEKAVQAWNGKEV-DGKILYVGRAQKKAERTQELKR 290
+++M + +G+SR FGFVA+E+P+ A AV +GK++ D K LYV RA KAER QE+ R
Sbjct: 226 HKLMLDEEGRSRRFGFVAFENPQSAVAAVIGLHGKQLGDNKFLYVARALSKAERQQEINR 285
Query: 291 RFE 293
+ E
Sbjct: 286 KLE 288
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 70/132 (53%), Gaps = 14/132 (10%)
Query: 206 VYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWN 264
+YIKN +++ + E F +G I + V ++ G SRG+GFV ++S E A A++ N
Sbjct: 109 IYIKNLERSIDNKAVYETFSVFGNILNCNVAKDEEGNSRGYGFVHFDSEEAARAAIEKVN 168
Query: 265 GKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRK 324
G + + ++V + + +R QE F+ NLYVKNL + ++ LR+
Sbjct: 169 GMLCNNQKVHVVKFIPRRDREQEKATHFK-------------NLYVKNLSEEFTEQHLRE 215
Query: 325 EFTPFGTITSAK 336
F P+G ITS K
Sbjct: 216 MFEPYGRITSHK 227
>gi|195029531|ref|XP_001987626.1| GH22019 [Drosophila grimshawi]
gi|193903626|gb|EDW02493.1| GH22019 [Drosophila grimshawi]
Length = 304
Score = 219 bits (557), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 107/189 (56%), Positives = 148/189 (78%), Gaps = 5/189 (2%)
Query: 113 VFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVN 172
++IKNL++SIDNKA+Y+TFS FG+IL+C VA+DE+GNS+GYGFVHF++EEAA +IEKVN
Sbjct: 112 IYIKNLERSIDNKAVYETFSVFGNILNCNVAKDEEGNSRGYGFVHFDSEEAARAAIEKVN 171
Query: 173 GMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITS 232
GML N++ V V KFIPR++RE+ EKA F N+Y+KN E+F ++ L+EMFEPYG ITS
Sbjct: 172 GMLCNNQKVHVVKFIPRRDREQ---EKATHFKNLYVKNLSEEFTEQHLREMFEPYGRITS 228
Query: 233 YRVM-NNDGKSRGFGFVAYESPEFAEKAVQAWNGKEV-DGKILYVGRAQKKAERTQELKR 290
+++M + +G+SR FGFVA+E+P+ A AV +GK++ D K LYV RA K ER QE+ R
Sbjct: 229 HKLMLDEEGRSRRFGFVAFENPQSALAAVIGLHGKQLGDNKFLYVARALSKNERQQEINR 288
Query: 291 RFEMLKIER 299
+ E K ++
Sbjct: 289 KLEERKRQK 297
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 70/132 (53%), Gaps = 14/132 (10%)
Query: 206 VYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWN 264
+YIKN +++ + E F +G I + V ++ G SRG+GFV ++S E A A++ N
Sbjct: 112 IYIKNLERSIDNKAVYETFSVFGNILNCNVAKDEEGNSRGYGFVHFDSEEAARAAIEKVN 171
Query: 265 GKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRK 324
G + + ++V + + +R QE F+ NLYVKNL + ++ LR+
Sbjct: 172 GMLCNNQKVHVVKFIPRRDREQEKATHFK-------------NLYVKNLSEEFTEQHLRE 218
Query: 325 EFTPFGTITSAK 336
F P+G ITS K
Sbjct: 219 MFEPYGRITSHK 230
>gi|167527097|ref|XP_001747881.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163773630|gb|EDQ87268.1| predicted protein [Monosiga brevicollis MX1]
Length = 553
Score = 218 bits (555), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 118/263 (44%), Positives = 169/263 (64%), Gaps = 3/263 (1%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D + + NF+ LKG+P+RIM+S+RDP+ R+SGVGN+FIKNL +DNKA+YDTF FG
Sbjct: 83 DAAKVYEAANFEELKGQPVRIMFSERDPTKRRSGVGNIFIKNLSAEVDNKALYDTFRVFG 142
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
++LSC+V D++GNS+G FV +E E A + I +VN + K+V V + PR++R E
Sbjct: 143 TVLSCRVLYDQEGNSRGIAFVQYEDAEVAKQVIAQVNDKKILDKVVKVEAYKPRRQRMLE 202
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEF 255
E K FTNV+ KN D +DE + + FE +G I S + ++D R +GFVAY+
Sbjct: 203 AEETQKNFTNVFFKNVAADISDEDIMKEFENFGEIESKVLKSHDQFGR-YGFVAYKDTAD 261
Query: 256 AEKAVQAWNGKEV--DGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNL 313
A+KAV N K + DG LYV RAQ+K+ER L+R FE + E +Y+ NLY+KN
Sbjct: 262 AQKAVSELNDKPLGADGTKLYVARAQRKSERMGRLRREFERRRTEMRAKYKDANLYIKNF 321
Query: 314 DDSIDDERLRKEFTPFGTITSAK 336
+ + ++ LRK F +GTI S +
Sbjct: 322 SEDVTEDELRKMFEAYGTIVSVR 344
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/199 (36%), Positives = 110/199 (55%), Gaps = 20/199 (10%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NVF KN+ I ++ + F FG I S + +Q YGFV ++ A K++ ++
Sbjct: 212 NVFFKNVAADISDEDIMKEFENFGEIESKVLKSHDQFGR--YGFVAYKDTADAQKAVSEL 269
Query: 172 NGMLLNSKIVFVGKFIPRKEREKE-LGEKAKLF-------------TNVYIKNFGEDFND 217
N L + + ++ R +R+ E +G + F N+YIKNF ED +
Sbjct: 270 NDKPLGADGTKL--YVARAQRKSERMGRLRREFERRRTEMRAKYKDANLYIKNFSEDVTE 327
Query: 218 EKLKEMFEPYGTITSYRVMNN-DGKSRGFGFVAYESPEFAEKAVQAWNGK-EVDGKILYV 275
++L++MFE YGTI S RV+ + DG+SR FGFV + S E A +A+Q NG+ DGK LYV
Sbjct: 328 DELRKMFEAYGTIVSVRVVKDRDGQSRQFGFVLFSSEEEATRAIQEMNGRMTADGKPLYV 387
Query: 276 GRAQKKAERTQELKRRFEM 294
R + K ER QE++R+ M
Sbjct: 388 SRFRNKEERAQEVQRQRMM 406
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 71/227 (31%), Positives = 116/227 (51%), Gaps = 19/227 (8%)
Query: 111 GNVFIKNLDKSIDNKAMYDTFSAFG-SILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
++++ +L K + +Y+ F++FG ++ S +V +D S GYG+V+F T E A K
Sbjct: 29 ASLYVGDLSKDVIEAELYNFFNSFGATVQSVRVCRDMVTQTSLGYGYVNFATPEDAAKVY 88
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
E N L + V + F R ++ G N++IKN + +++ L + F +G
Sbjct: 89 EAANFEELKGQPVRI-MFSERDPTKRRSG-----VGNIFIKNLSAEVDNKALYDTFRVFG 142
Query: 229 TITSYRVM-NNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQE 287
T+ S RV+ + +G SRG FV YE E A++ + N K++ K++ V A K
Sbjct: 143 TVLSCRVLYDQEGNSRGIAFVQYEDAEVAKQVIAQVNDKKILDKVVKV-EAYK------- 194
Query: 288 LKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITS 334
RR ML+ E + N++ KN+ I DE + KEF FG I S
Sbjct: 195 -PRRQRMLEAEETQK-NFTNVFFKNVAADISDEDIMKEFENFGEIES 239
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 61/95 (64%), Gaps = 2/95 (2%)
Query: 111 GNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEK 170
N++IKN + + + F A+G+I+S +V +D G S+ +GFV F +EE A ++I++
Sbjct: 314 ANLYIKNFSEDVTEDELRKMFEAYGTIVSVRVVKDRDGQSRQFGFVLFSSEEEATRAIQE 373
Query: 171 VNG-MLLNSKIVFVGKFIPRKEREKELGEKAKLFT 204
+NG M + K ++V +F ++ER +E+ ++ ++ T
Sbjct: 374 MNGRMTADGKPLYVSRFRNKEERAQEV-QRQRMMT 407
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 67/137 (48%), Gaps = 21/137 (15%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYG-TITSYRVMNN--DGKSRGFGFVAYESPEFAEKAV 260
++Y+ + +D + +L F +G T+ S RV + S G+G+V + +PE A K
Sbjct: 29 ASLYVGDLSKDVIEAELYNFFNSFGATVQSVRVCRDMVTQTSLGYGYVNFATPEDAAKVY 88
Query: 261 QAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGV-NLYVKNLDDSIDD 319
+A N +E+ G+ + + +++ + R GV N+++KNL +D+
Sbjct: 89 EAANFEELKGQPVRIMFSERDPTK-----------------RRSGVGNIFIKNLSAEVDN 131
Query: 320 ERLRKEFTPFGTITSAK 336
+ L F FGT+ S +
Sbjct: 132 KALYDTFRVFGTVLSCR 148
>gi|15228016|ref|NP_181204.1| poly(A) binding protein 7 [Arabidopsis thaliana]
gi|12229883|sp|Q9ZQA8.1|PABPX_ARATH RecName: Full=Probable polyadenylate-binding protein At2g36660;
Short=PABP; Short=Poly(A)-binding protein At2g36660
gi|4415911|gb|AAD20142.1| putative poly(A) binding protein [Arabidopsis thaliana]
gi|330254185|gb|AEC09279.1| poly(A) binding protein 7 [Arabidopsis thaliana]
Length = 609
Score = 216 bits (551), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 111/262 (42%), Positives = 168/262 (64%), Gaps = 5/262 (1%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D A++ N L G+ IR+MWS R P R++GVGNVF+KNL +S+ N + D F FG
Sbjct: 77 DANLAIEKKNNSLLNGKMIRVMWSVRAPDARRNGVGNVFVKNLPESVTNAVLQDMFKKFG 136
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+I+SCKVA E G S+GYGFV FE E+AA+ +I+ +N ++ K ++VGKF+ + +R K
Sbjct: 137 NIVSCKVATLEDGKSRGYGFVQFEQEDAAHAAIQTLNSTIVADKEIYVGKFMKKTDRVK- 195
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDGK-SRGFGFVAYESPE 254
+ +TN+Y+KN D +++ L+E F +G I S + ++ + RG+ FV +++PE
Sbjct: 196 ---PEEKYTNLYMKNLDADVSEDLLREKFAEFGKIVSLAIAKDENRLCRGYAFVNFDNPE 252
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A +A + NG + K LYVGRAQKKAER Q L+ +F+ E+ + N+YVKN++
Sbjct: 253 DARRAAETVNGTKFGSKCLYVGRAQKKAEREQLLREQFKEKHEEQKMIAKVSNIYVKNVN 312
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
++ +E LRK F+ GTITS K
Sbjct: 313 VAVTEEELRKHFSQCGTITSTK 334
Score = 134 bits (337), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 74/192 (38%), Positives = 117/192 (60%), Gaps = 11/192 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
N+++KNLD + + + F+ FG I+S +A+DE +GY FV+F+ E A ++ E V
Sbjct: 202 NLYMKNLDADVSEDLLREKFAEFGKIVSLAIAKDENRLCRGYAFVNFDNPEDARRAAETV 261
Query: 172 NGMLLNSKIVFVGKFIPRKERE-------KELGEKAKLF---TNVYIKNFGEDFNDEKLK 221
NG SK ++VG+ + ERE KE E+ K+ +N+Y+KN +E+L+
Sbjct: 262 NGTKFGSKCLYVGRAQKKAEREQLLREQFKEKHEEQKMIAKVSNIYVKNVNVAVTEEELR 321
Query: 222 EMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
+ F GTITS ++M ++ GKS+GFGFV + +PE A AV+ ++G+ GK LYV AQK
Sbjct: 322 KHFSQCGTITSTKLMCDEKGKSKGFGFVCFSTPEEAIDAVKTFHGQMFHGKPLYVAIAQK 381
Query: 281 KAERTQELKRRF 292
K +R +L+ +F
Sbjct: 382 KEDRKMQLQVQF 393
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 75/228 (32%), Positives = 121/228 (53%), Gaps = 24/228 (10%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQD-EQGNSKGYGFVHFETEEAANKSI 168
++++ +L S+ +YD F+ F S+ S ++ +D G S YG+ +F + + AN +I
Sbjct: 23 TASLYVGDLHPSVTEGILYDAFAEFKSLTSVRLCKDASSGRSLCYGYANFLSRQDANLAI 82
Query: 169 EKVNGMLLNSKIVFVGKFIPRKE-REKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPY 227
EK N LLN K++ V + + R +G NV++KN E + L++MF+ +
Sbjct: 83 EKKNNSLLNGKMIRVMWSVRAPDARRNGVG-------NVFVKNLPESVTNAVLQDMFKKF 135
Query: 228 GTITSYRVMN-NDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQ 286
G I S +V DGKSRG+GFV +E + A A+Q N V K +YVG+ KK +R +
Sbjct: 136 GNIVSCKVATLEDGKSRGYGFVQFEQEDAAHAAIQTLNSTIVADKEIYVGKFMKKTDRVK 195
Query: 287 ELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITS 334
++ NLY+KNLD + ++ LR++F FG I S
Sbjct: 196 PEEKY--------------TNLYMKNLDADVSEDLLREKFAEFGKIVS 229
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 78/155 (50%), Gaps = 18/155 (11%)
Query: 58 HQLGSGAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQ----RDPSLRK------ 107
++L G V P D RA +T+N + + + +Q R+ LR+
Sbjct: 237 NRLCRGYAFVNFDNPE--DARRAAETVNGTKFGSKCLYVGRAQKKAEREQLLREQFKEKH 294
Query: 108 ------SGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETE 161
+ V N+++KN++ ++ + + FS G+I S K+ DE+G SKG+GFV F T
Sbjct: 295 EEQKMIAKVSNIYVKNVNVAVTEEELRKHFSQCGTITSTKLMCDEKGKSKGFGFVCFSTP 354
Query: 162 EAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKEL 196
E A +++ +G + + K ++V +++R+ +L
Sbjct: 355 EEAIDAVKTFHGQMFHGKPLYVAIAQKKEDRKMQL 389
>gi|6137350|pdb|1CVJ|A Chain A, X-Ray Crystal Structure Of The Poly(A)-Binding Protein In
Complex With Polyadenylate Rna
gi|6137351|pdb|1CVJ|B Chain B, X-Ray Crystal Structure Of The Poly(A)-Binding Protein In
Complex With Polyadenylate Rna
gi|6137352|pdb|1CVJ|C Chain C, X-Ray Crystal Structure Of The Poly(A)-Binding Protein In
Complex With Polyadenylate Rna
gi|6137353|pdb|1CVJ|D Chain D, X-Ray Crystal Structure Of The Poly(A)-Binding Protein In
Complex With Polyadenylate Rna
gi|6137354|pdb|1CVJ|E Chain E, X-Ray Crystal Structure Of The Poly(A)-Binding Protein In
Complex With Polyadenylate Rna
gi|6137355|pdb|1CVJ|F Chain F, X-Ray Crystal Structure Of The Poly(A)-Binding Protein In
Complex With Polyadenylate Rna
gi|6137356|pdb|1CVJ|G Chain G, X-Ray Crystal Structure Of The Poly(A)-Binding Protein In
Complex With Polyadenylate Rna
gi|6137357|pdb|1CVJ|H Chain H, X-Ray Crystal Structure Of The Poly(A)-Binding Protein In
Complex With Polyadenylate Rna
Length = 190
Score = 214 bits (546), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 105/141 (74%), Positives = 118/141 (83%), Gaps = 3/141 (2%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD +KG+P+RIMWSQRDPSLRKSGVGN+FIKNLDKSI
Sbjct: 53 GYAYVNFQQP--ADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFSAFG+ILSCKV DE G SKGYGFVHFET+EAA ++IEK+NGMLLN + VF
Sbjct: 111 DNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVF 169
Query: 183 VGKFIPRKEREKELGEKAKLF 203
VG+F RKERE ELG +AK F
Sbjct: 170 VGRFKSRKEREAELGARAKEF 190
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 105/191 (54%), Gaps = 7/191 (3%)
Query: 102 DPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFET 160
+PS + ++++ +L + +Y+ FS G ILS +V +D S GY +V+F+
Sbjct: 2 NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 161 EEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKL 220
A ++++ +N ++ K V I +R+ L + N++IKN + +++ L
Sbjct: 62 PADAERALDTMNFDVIKGKPVR----IMWSQRDPSLRKSG--VGNIFIKNLDKSIDNKAL 115
Query: 221 KEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
+ F +G I S +V+ ++ S+G+GFV +E+ E AE+A++ NG ++ + ++VGR +
Sbjct: 116 YDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKS 175
Query: 281 KAERTQELKRR 291
+ ER EL R
Sbjct: 176 RKEREAELGAR 186
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 64/136 (47%), Gaps = 20/136 (14%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQ 261
++Y+ + D + L E F P G I S RV + +S G+ +V ++ P AE+A+
Sbjct: 11 ASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALD 70
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGV-NLYVKNLDDSIDDE 320
N + GK + + +Q+ R GV N+++KNLD SID++
Sbjct: 71 TMNFDVIKGKPVRIMWSQRDPSL-----------------RKSGVGNIFIKNLDKSIDNK 113
Query: 321 RLRKEFTPFGTITSAK 336
L F+ FG I S K
Sbjct: 114 ALYDTFSAFGNILSCK 129
>gi|400260922|pdb|4F02|A Chain A, Crystal Structure Of The Pabp-Binding Site Of Eif4g In
Complex With Rrm1-2 Of Pabp And Poly(A)
gi|400260925|pdb|4F02|D Chain D, Crystal Structure Of The Pabp-Binding Site Of Eif4g In
Complex With Rrm1-2 Of Pabp And Poly(A)
Length = 213
Score = 214 bits (545), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 105/141 (74%), Positives = 118/141 (83%), Gaps = 3/141 (2%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD +KG+P+RIMWSQRDPSLRKSGVGN+FIKNLDKSI
Sbjct: 58 GYAYVNFQQP--ADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSI 115
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFSAFG+ILSCKV DE G SKGYGFVHFET+EAA ++IEK+NGMLLN + VF
Sbjct: 116 DNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVF 174
Query: 183 VGKFIPRKEREKELGEKAKLF 203
VG+F RKERE ELG +AK F
Sbjct: 175 VGRFKSRKEREAELGARAKEF 195
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 105/191 (54%), Gaps = 7/191 (3%)
Query: 102 DPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFET 160
+PS + ++++ +L + +Y+ FS G ILS +V +D S GY +V+F+
Sbjct: 7 NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 66
Query: 161 EEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKL 220
A ++++ +N ++ K V I +R+ L + N++IKN + +++ L
Sbjct: 67 PADAERALDTMNFDVIKGKPVR----IMWSQRDPSLRKSG--VGNIFIKNLDKSIDNKAL 120
Query: 221 KEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
+ F +G I S +V+ ++ S+G+GFV +E+ E AE+A++ NG ++ + ++VGR +
Sbjct: 121 YDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKS 180
Query: 281 KAERTQELKRR 291
+ ER EL R
Sbjct: 181 RKEREAELGAR 191
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 64/137 (46%), Gaps = 20/137 (14%)
Query: 203 FTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAV 260
++Y+ + D + L E F P G I S RV + +S G+ +V ++ P AE+A+
Sbjct: 15 MASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERAL 74
Query: 261 QAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGV-NLYVKNLDDSIDD 319
N + GK + + +Q+ R GV N+++KNLD SID+
Sbjct: 75 DTMNFDVIKGKPVRIMWSQRDPSL-----------------RKSGVGNIFIKNLDKSIDN 117
Query: 320 ERLRKEFTPFGTITSAK 336
+ L F+ FG I S K
Sbjct: 118 KALYDTFSAFGNILSCK 134
>gi|348677381|gb|EGZ17198.1| hypothetical protein PHYSODRAFT_354553 [Phytophthora sojae]
Length = 317
Score = 214 bits (544), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 119/216 (55%), Positives = 150/216 (69%), Gaps = 14/216 (6%)
Query: 97 MWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGF 155
MWSQRDPSLRKSGVGN+F+KNLD SIDNKA+YDTFS FG+ILSCKVA D G SKGYG+
Sbjct: 1 MWSQRDPSLRKSGVGNIFVKNLDTSIDNKALYDTFSLFGNILSCKVAIDHTTGASKGYGY 60
Query: 156 VHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDF 215
VH+ET EAA ++I K+NGML+ VFVG F R++R A +TN Y+KN +
Sbjct: 61 VHYETAEAATEAIAKINGMLIAGTEVFVGHFQKRQDR-----PDADDWTNCYVKNIPTQW 115
Query: 216 NDEKLKEMFEPYGTITSYRVMNNDG---KSRGFGFVAYESPEFAEKAVQAWNGKEVDG-- 270
D L + FEP+G + S VM ++ ++RGFGFV YE E A KAV A NGK
Sbjct: 116 TDADLLKEFEPFGKVLSAVVMKDNANPEQNRGFGFVNYEDSEAAHKAVDALNGKSYPAGE 175
Query: 271 ---KILYVGRAQKKAERTQELKRRFEMLKIERLNRY 303
LYVG+AQK++ER +EL+ +FE LK+ER+N+Y
Sbjct: 176 GVETELYVGKAQKRSERERELRNKFEQLKMERINKY 211
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 66/133 (49%), Gaps = 17/133 (12%)
Query: 205 NVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM--NNDGKSRGFGFVAYESPEFAEKAVQA 262
N+++KN +++ L + F +G I S +V + G S+G+G+V YE+ E A +A+
Sbjct: 16 NIFVKNLDTSIDNKALYDTFSLFGNILSCKVAIDHTTGASKGYGYVHYETAEAATEAIAK 75
Query: 263 WNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERL 322
NG + G ++VG QK+ +R + N YVKN+ D L
Sbjct: 76 INGMLIAGTEVFVGHFQKRQDRP---------------DADDWTNCYVKNIPTQWTDADL 120
Query: 323 RKEFTPFGTITSA 335
KEF PFG + SA
Sbjct: 121 LKEFEPFGKVLSA 133
>gi|297834512|ref|XP_002885138.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297330978|gb|EFH61397.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 542
Score = 213 bits (542), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 118/259 (45%), Positives = 170/259 (65%), Gaps = 6/259 (2%)
Query: 80 ALDTMNFDALKGRPIRIMWSQRDPSLRK-SGVGNVFIKNLDKSIDNKAMYDTFSAFGSIL 138
A+ +N LKG+ +RIMWSQRD S R+ +G GN+++KNLD SI + + F+ FG IL
Sbjct: 78 AMARLNHTDLKGKAMRIMWSQRDLSYRRRTGFGNLYVKNLDISITSSGLERMFNPFGVIL 137
Query: 139 SCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGE 198
SCKV +E G SKG+GFV FETE++A + ++G +++ K +FV KFI + ER G
Sbjct: 138 SCKVV-EENGQSKGFGFVQFETEQSAVTARSALHGSMVDGKKLFVAKFINKNERVAMAGN 196
Query: 199 KAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAE 257
K FTNVY+KN E+ ++ L +F YGT++S VM + G+SRGFGFV + PE A+
Sbjct: 197 KG--FTNVYVKNLIENITEDILHRLFSQYGTVSSVVVMRDGMGRSRGFGFVNFCHPENAK 254
Query: 258 KAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSI 317
KAV + +G++V K L+VG+A K+ ER + LK ++ I + N + NLYVKNL +S+
Sbjct: 255 KAVDSLHGRQVGSKTLFVGKALKRDERREMLKHKYRDNFIAKSN-MRWSNLYVKNLSESM 313
Query: 318 DDERLRKEFTPFGTITSAK 336
+D LR+ F +G I SAK
Sbjct: 314 NDTTLREIFGRYGQIVSAK 332
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 73/195 (37%), Positives = 120/195 (61%), Gaps = 10/195 (5%)
Query: 109 GVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSI 168
G NV++KNL ++I ++ FS +G++ S V +D G S+G+GFV+F E A K++
Sbjct: 198 GFTNVYVKNLIENITEDILHRLFSQYGTVSSVVVMRDGMGRSRGFGFVNFCHPENAKKAV 257
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAK---------LFTNVYIKNFGEDFNDEK 219
+ ++G + SK +FVGK + R ER + L K + ++N+Y+KN E ND
Sbjct: 258 DSLHGRQVGSKTLFVGKALKRDERREMLKHKYRDNFIAKSNMRWSNLYVKNLSESMNDTT 317
Query: 220 LKEMFEPYGTITSYRVMNN-DGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRA 278
L+E+F YG I S +VM + +G+S+GFGFV + + E +++A + NG VDGK+L V A
Sbjct: 318 LREIFGRYGQIVSAKVMRHENGRSKGFGFVCFSNREESKQAKRYLNGFSVDGKLLVVRVA 377
Query: 279 QKKAERTQELKRRFE 293
++K +R + L++ F
Sbjct: 378 ERKEDRLKRLQQYFH 392
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 117/229 (51%), Gaps = 20/229 (8%)
Query: 108 SGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANK 166
S ++++ +L + + + FS +LS + ++ G S Y +++F++ +A+
Sbjct: 18 SMFASLYVGDLSPDVTEQDLIHRFSLTVPVLSVHLCRNSVTGKSLCYAYINFDSPFSASN 77
Query: 167 SIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKL-FTNVYIKNFGEDFNDEKLKEMFE 225
++ ++N L GK + +++L + + F N+Y+KN L+ MF
Sbjct: 78 AMARLNHTDLK------GKAMRIMWSQRDLSYRRRTGFGNLYVKNLDISITSSGLERMFN 131
Query: 226 PYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERT 285
P+G I S +V+ +G+S+GFGFV +E+ + A A A +G VDGK L+V + K ER
Sbjct: 132 PFGVILSCKVVEENGQSKGFGFVQFETEQSAVTARSALHGSMVDGKKLFVAKFINKNER- 190
Query: 286 QELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITS 334
+ N+YVKNL ++I ++ L + F+ +GT++S
Sbjct: 191 -----------VAMAGNKGFTNVYVKNLIENITEDILHRLFSQYGTVSS 228
>gi|209881749|ref|XP_002142312.1| polyadenylate-binding protein [Cryptosporidium muris RN66]
gi|209557918|gb|EEA07963.1| polyadenylate-binding protein, putative [Cryptosporidium muris
RN66]
Length = 723
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 99/185 (53%), Positives = 135/185 (72%), Gaps = 4/185 (2%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D ERALDT+NF ++ RP RIMW RDP+ R++ GNVF+KNLDKSIDNK ++DTFS FG
Sbjct: 65 DAERALDTLNFTCIRSRPCRIMWCLRDPASRRNNEGNVFVKNLDKSIDNKTLFDTFSLFG 124
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+I+SCK+A D +GNS GYGF+HFE E+A ++I ++NGM+L + ++VGKF + ER
Sbjct: 125 NIMSCKIATDSEGNSLGYGFIHFEHPESAKEAIARLNGMILGDRPIYVGKFQRKAER--- 181
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEF 255
EK K FTNVY+K+ + +++E L +F YG I+S V+ +D K R FGFV +E PE
Sbjct: 182 FSEKDKTFTNVYVKHIPKTWSEETLHTLFGVYGKISSL-VLQSDSKGRPFGFVNFEDPES 240
Query: 256 AEKAV 260
A+KAV
Sbjct: 241 AKKAV 245
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 116/228 (50%), Gaps = 25/228 (10%)
Query: 111 GNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSIE 169
++++ +LD + +Y+ F++ + S ++ +D S GY +V++ + A ++++
Sbjct: 12 ASLYVGDLDPDVTETMLYEIFNSVAVVSSVRICRDALTRRSLGYAYVNYNSVADAERALD 71
Query: 170 KVNGMLLNSKIVFVGKFI--PRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPY 227
+N + S+ + + P R E NV++KN + +++ L + F +
Sbjct: 72 TLNFTCIRSRPCRIMWCLRDPASRRNNE--------GNVFVKNLDKSIDNKTLFDTFSLF 123
Query: 228 GTITSYRV-MNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQ 286
G I S ++ +++G S G+GF+ +E PE A++A+ NG + + +YVG+ Q+KAER
Sbjct: 124 GNIMSCKIATDSEGNSLGYGFIHFEHPESAKEAIARLNGMILGDRPIYVGKFQRKAERFS 183
Query: 287 ELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITS 334
E + F N+YVK++ + +E L F +G I+S
Sbjct: 184 EKDKTF-------------TNVYVKHIPKTWSEETLHTLFGVYGKISS 218
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 81/263 (30%), Positives = 122/263 (46%), Gaps = 38/263 (14%)
Query: 80 ALDTMNFDALKGRPIRIMWSQRDP---SLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGS 136
A+ +N L RPI + QR S + NV++K++ K+ + ++ F +G
Sbjct: 156 AIARLNGMILGDRPIYVGKFQRKAERFSEKDKTFTNVYVKHIPKTWSEETLHTLFGVYGK 215
Query: 137 ILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREK-E 195
I S + D +G + +GFV+FE E+A K++ L N+ + +G + E+ E
Sbjct: 216 ISSLVLQSDSKG--RPFGFVNFEDPESAKKAVAN----LHNALVTPLGVELNSNNSERTE 269
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEF 255
G+ L + ++ V +ND K R E P+
Sbjct: 270 SGKDDGLSSISSNTESSDE-------------------TVESNDYKQRN----DKEDPQE 306
Query: 256 A--EKAVQAWNGKEVDGKI--LYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVK 311
A EK N D + LYV RAQK+ ER LK + E + E NRYQGVNLYVK
Sbjct: 307 ADVEKNSDEENSVPFDVQPNRLYVSRAQKRNERQVVLKSQHEAAR-ESQNRYQGVNLYVK 365
Query: 312 NLDDSIDDERLRKEFTPFGTITS 334
NL +S+ + LR F P+GTI+S
Sbjct: 366 NLSESMTESDLRSLFEPYGTISS 388
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 58/89 (65%), Gaps = 1/89 (1%)
Query: 205 NVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAW 263
N+Y+KN E + L+ +FEPYGTI+S + ++ G SRGFGFV++ SP+ A KA+
Sbjct: 361 NLYVKNLSESMTESDLRSLFEPYGTISSVSIKTDESGISRGFGFVSFLSPDEATKAITEM 420
Query: 264 NGKEVDGKILYVGRAQKKAERTQELKRRF 292
+ K V GK LYVG ++K +R L++R
Sbjct: 421 HLKLVRGKPLYVGLHERKEQRALRLQQRI 449
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 58/101 (57%), Gaps = 1/101 (0%)
Query: 101 RDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFET 160
R+ R GV N+++KNL +S+ + F +G+I S + DE G S+G+GFV F +
Sbjct: 351 RESQNRYQGV-NLYVKNLSESMTESDLRSLFEPYGTISSVSIKTDESGISRGFGFVSFLS 409
Query: 161 EEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAK 201
+ A K+I +++ L+ K ++VG +++R L ++ +
Sbjct: 410 PDEATKAITEMHLKLVRGKPLYVGLHERKEQRALRLQQRIR 450
>gi|13365527|dbj|BAB39137.1| poly(A)-binding protein [Carassius auratus]
Length = 154
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 106/154 (68%), Positives = 122/154 (79%), Gaps = 2/154 (1%)
Query: 97 MWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFV 156
MWSQRDP LRKSGVGN+FIKN+D+SIDNKA+YDT SAFG+ILSCKV DE G SKGYGFV
Sbjct: 1 MWSQRDPGLRKSGVGNIFIKNMDESIDNKALYDTSSAFGNILSCKVVCDENG-SKGYGFV 59
Query: 157 HFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFN 216
HFET+EAAN++IE +NGMLLN + VFVG F RKER E+G KA FTNVYIKNF ED +
Sbjct: 60 HFETQEAANRAIETMNGMLLNDRKVFVGHFKSRKERMAEMGAKAMEFTNVYIKNFSEDID 119
Query: 217 DEKLKEMFEPYGTITSYRVMNND-GKSRGFGFVA 249
EKLK +F +G S VM ++ G SRGFGFV
Sbjct: 120 REKLKSIFSEFGKTLSVCVMTDESGCSRGFGFVC 153
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 72/131 (54%), Gaps = 10/131 (7%)
Query: 205 NVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWN 264
N++IKN E +++ L + +G I S +V+ ++ S+G+GFV +E+ E A +A++ N
Sbjct: 16 NIFIKNMDESIDNKALYDTSSAFGNILSCKVVCDENGSKGYGFVHFETQEAANRAIETMN 75
Query: 265 GKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRK 324
G ++ + ++VG + + ER E+ + + N+Y+KN + ID E+L+
Sbjct: 76 GMLLNDRKVFVGHFKSRKERMAEMGAK----------AMEFTNVYIKNFSEDIDREKLKS 125
Query: 325 EFTPFGTITSA 335
F+ FG S
Sbjct: 126 IFSEFGKTLSV 136
>gi|47198027|emb|CAF89020.1| unnamed protein product [Tetraodon nigroviridis]
Length = 383
Score = 211 bits (536), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 104/156 (66%), Positives = 124/156 (79%), Gaps = 1/156 (0%)
Query: 182 FVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-G 240
FVG F RKERE+ELG KA FTNVYIKNFGED+ DEKLKE+F +G S RVM ++ G
Sbjct: 1 FVGNFKSRKEREEELGSKALKFTNVYIKNFGEDYTDEKLKEVFSAFGRTLSVRVMKDERG 60
Query: 241 KSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERL 300
+SRGFGFV + A+KAV NG E++GK++YVGRAQK+ ER ELKR+FE++K +R+
Sbjct: 61 RSRGFGFVNFAHHGDAQKAVDEMNGTELNGKVIYVGRAQKRLERQGELKRKFELIKQDRI 120
Query: 301 NRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
RYQGVNLYVKNLDD IDDERLRKEF P+GTITSAK
Sbjct: 121 QRYQGVNLYVKNLDDGIDDERLRKEFAPYGTITSAK 156
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 56/142 (39%), Positives = 87/142 (61%), Gaps = 10/142 (7%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV+IKN + ++ + + FSAFG LS +V +DE+G S+G+GFV+F A K+++++
Sbjct: 24 NVYIKNFGEDYTDEKLKEVFSAFGRTLSVRVMKDERGRSRGFGFVNFAHHGDAQKAVDEM 83
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKLK 221
NG LN K+++VG+ R ER+ EL K +L N+Y+KN + +DE+L+
Sbjct: 84 NGTELNGKVIYVGRAQKRLERQGELKRKFELIKQDRIQRYQGVNLYVKNLDDGIDDERLR 143
Query: 222 EMFEPYGTITSYRVMNNDGKSR 243
+ F PYGTITS +V SR
Sbjct: 144 KEFAPYGTITSAKVPQRRLPSR 165
Score = 41.2 bits (95), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 43/86 (50%), Gaps = 18/86 (20%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQR-----------------DPSLRKSGVGNVFIKNL 118
D ++A+D MN L G+ I + +Q+ D R GV N+++KNL
Sbjct: 75 DAQKAVDEMNGTELNGKVIYVGRAQKRLERQGELKRKFELIKQDRIQRYQGV-NLYVKNL 133
Query: 119 DKSIDNKAMYDTFSAFGSILSCKVAQ 144
D ID++ + F+ +G+I S KV Q
Sbjct: 134 DDGIDDERLRKEFAPYGTITSAKVPQ 159
>gi|198422109|ref|XP_002123332.1| PREDICTED: similar to poly A binding protein, cytoplasmic 1 b,
partial [Ciona intestinalis]
Length = 500
Score = 207 bits (526), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 103/172 (59%), Positives = 132/172 (76%), Gaps = 6/172 (3%)
Query: 171 VNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTI 230
VNGMLLN K VFVGKF+ R ER K++GE+ + FTNVYIKNFG+ ++++ L+ MFE YG +
Sbjct: 1 VNGMLLNDKKVFVGKFLTRSERIKKMGERVRQFTNVYIKNFGDKYDEKTLQVMFEKYGVV 60
Query: 231 TSYRVMNN-DGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGK-----ILYVGRAQKKAER 284
S VM + DG SRGFGFVAY+S E A+ AV+A NG+E++G ILYVGRAQKK ER
Sbjct: 61 KSVAVMRDRDGNSRGFGFVAYDSHEEAQAAVEAMNGQEIEGASGSTDILYVGRAQKKQER 120
Query: 285 TQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
QEL+ ++E K ER+ R+QGVNLYVKNLDD++ D+ LR+ F +GTITSAK
Sbjct: 121 QQELRGQYEQQKQERIQRFQGVNLYVKNLDDNVTDDELREAFATYGTITSAK 172
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 79/222 (35%), Positives = 126/222 (56%), Gaps = 26/222 (11%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV+IKN D K + F +G + S V +D GNS+G+GFV +++ E A ++E +
Sbjct: 35 NVYIKNFGDKYDEKTLQVMFEKYGVVKSVAVMRDRDGNSRGFGFVAYDSHEEAQAAVEAM 94
Query: 172 NGMLL-----NSKIVFVGKFIPRKEREKEL--------GEKAKLF--TNVYIKNFGEDFN 216
NG + ++ I++VG+ ++ER++EL E+ + F N+Y+KN ++
Sbjct: 95 NGQEIEGASGSTDILYVGRAQKKQERQQELRGQYEQQKQERIQRFQGVNLYVKNLDDNVT 154
Query: 217 DEKLKEMFEPYGTITSYRVMNNDG------KSRGFGFVAYESPEFAEKAVQAWNGKEVDG 270
D++L+E F YGTITS ++M +DG +SRGFGFV + SPE A KAV NG+ V
Sbjct: 155 DDELREAFATYGTITSAKIM-SDGECSTGERSRGFGFVCFSSPEEATKAVTEMNGRIVGT 213
Query: 271 KILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKN 312
K LYV AQ++ +R L ++ ++R+ GV + N
Sbjct: 214 KPLYVALAQRREDRKAHLTAQY----MQRMTSSMGVRMATPN 251
>gi|71993217|ref|NP_001021711.1| Protein PAB-1, isoform c [Caenorhabditis elegans]
gi|38422743|emb|CAE54917.1| Protein PAB-1, isoform c [Caenorhabditis elegans]
Length = 586
Score = 206 bits (525), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 109/257 (42%), Positives = 161/257 (62%), Gaps = 30/257 (11%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGN-SKGYGFVHFETEEAANKSI 168
+ ++++ +L ++ +++ FSA G +LS +V +D S GY +V+F+ A +++
Sbjct: 31 MASLYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPADAERAM 90
Query: 169 EKVNGMLLNSKI---------------------------VFVGKFIPRKEREKELGEKAK 201
+ +N L+ K VFVGKF PR +R +ELGE AK
Sbjct: 91 DTMNFEALHGKPMRIMWSQRDPAMRRSGAGNIFIKNLDKVFVGKFQPRAQRNRELGETAK 150
Query: 202 LFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQ 261
FTNVY+KNFG+ +N E L+++F +G ITS VM +GKS+GFGFVA+ +PE AE AVQ
Sbjct: 151 QFTNVYVKNFGDHYNKETLEKLFAKFGNITSCEVMTVEGKSKGFGFVAFANPEEAETAVQ 210
Query: 262 AWNGKEVDGK--ILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDD 319
A + ++G L+V RAQKK+ER ELK++ E K ER+ +YQGVNLYVKNLD+++DD
Sbjct: 211 ALHDSTIEGTDLKLHVCRAQKKSERHAELKKKHEQHKAERMQKYQGVNLYVKNLDETVDD 270
Query: 320 ERLRKEFTPFGTITSAK 336
+ L+K+F +G ITSAK
Sbjct: 271 DGLKKQFESYGNITSAK 287
Score = 172 bits (435), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 107/279 (38%), Positives = 150/279 (53%), Gaps = 49/279 (17%)
Query: 60 LGSGAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLD 119
L G V QP D ERA+DTMNF+AL G+P+RIMWSQRDP++R+SG GN+FIKNLD
Sbjct: 71 LSLGYAYVNFQQP--ADAERAMDTMNFEALHGKPMRIMWSQRDPAMRRSGAGNIFIKNLD 128
Query: 120 K---------SIDNKAMYDT------------------------FSAFGSILSCKVAQDE 146
K + N+ + +T F+ FG+I SC+V E
Sbjct: 129 KVFVGKFQPRAQRNRELGETAKQFTNVYVKNFGDHYNKETLEKLFAKFGNITSCEVMTVE 188
Query: 147 QGNSKGYGFVHFETEEAANKSIEKVNGMLLNSK--IVFVGKFIPRKEREKELGEKAKLF- 203
G SKG+GFV F E A +++ ++ + + V + + ER EL +K +
Sbjct: 189 -GKSKGFGFVAFANPEEAETAVQALHDSTIEGTDLKLHVCRAQKKSERHAELKKKHEQHK 247
Query: 204 ---------TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GKSRGFGFVAYESP 253
N+Y+KN E +D+ LK+ FE YG ITS +VM ++ G+S+GFGFV +E P
Sbjct: 248 AERMQKYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDENGRSKGFGFVCFEKP 307
Query: 254 EFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRF 292
E A AV N K V K LYV AQ+K +R +L ++
Sbjct: 308 EEATSAVTEMNSKMVCSKPLYVAIAQRKEDRRAQLASQY 346
>gi|15228191|ref|NP_188259.1| poly(A) binding protein 6 [Arabidopsis thaliana]
gi|2062166|gb|AAB63640.1| poly(A)-binding protein isolog [Arabidopsis thaliana]
gi|9279720|dbj|BAB01277.1| poly(A) binding protein-like [Arabidopsis thaliana]
gi|332642284|gb|AEE75805.1| poly(A) binding protein 6 [Arabidopsis thaliana]
Length = 537
Score = 206 bits (524), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 122/304 (40%), Positives = 182/304 (59%), Gaps = 14/304 (4%)
Query: 41 LIDGNTVKYDWDSGYTCHQLGSGAIL----VQLGQPYMLDTERALDTMNFDALKGRPIRI 96
LID ++ S + C +G + + P+ A+ +N LKG+ +RI
Sbjct: 37 LIDKFSLNVPVVSVHLCRNSVTGKSMCYAYINFDSPF--SASNAMTRLNHSDLKGKAMRI 94
Query: 97 MWSQRDPSLRK---SGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGY 153
MWSQRD + R+ +G N+++KNLD SI + + F FGSILSCKV +E G SKG+
Sbjct: 95 MWSQRDLAYRRRTRTGFANLYVKNLDSSITSSCLERMFCPFGSILSCKVV-EENGQSKGF 153
Query: 154 GFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGE 213
GFV F+TE++A + ++G ++ K +FV KFI + ER G + TNVY+KN E
Sbjct: 154 GFVQFDTEQSAVSARSALHGSMVYGKKLFVAKFINKDERAAMAGNQDS--TNVYVKNLIE 211
Query: 214 DFNDEKLKEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKI 272
D+ L +F YGT++S VM + G+SRGFGFV + +PE A+KA+++ G ++ K
Sbjct: 212 TVTDDCLHTLFSQYGTVSSVVVMRDGMGRSRGFGFVNFCNPENAKKAMESLCGLQLGSKK 271
Query: 273 LYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTI 332
L+VG+A KK ER + LK++F I + N + NLYVKNL +S+++ RLR+ F +G I
Sbjct: 272 LFVGKALKKDERREMLKQKFSDNFIAKPN-MRWSNLYVKNLSESMNETRLREIFGCYGQI 330
Query: 333 TSAK 336
SAK
Sbjct: 331 VSAK 334
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 72/192 (37%), Positives = 123/192 (64%), Gaps = 10/192 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV++KNL +++ + ++ FS +G++ S V +D G S+G+GFV+F E A K++E +
Sbjct: 203 NVYVKNLIETVTDDCLHTLFSQYGTVSSVVVMRDGMGRSRGFGFVNFCNPENAKKAMESL 262
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEK------AKL---FTNVYIKNFGEDFNDEKLKE 222
G+ L SK +FVGK + + ER + L +K AK ++N+Y+KN E N+ +L+E
Sbjct: 263 CGLQLGSKKLFVGKALKKDERREMLKQKFSDNFIAKPNMRWSNLYVKNLSESMNETRLRE 322
Query: 223 MFEPYGTITSYRVM-NNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKK 281
+F YG I S +VM + +G+S+GFGFV + + E +++A + NG VDGK + V A++K
Sbjct: 323 IFGCYGQIVSAKVMCHENGRSKGFGFVCFSNCEESKQAKRYLNGFLVDGKPIVVRVAERK 382
Query: 282 AERTQELKRRFE 293
+R + L++ F+
Sbjct: 383 EDRIKRLQQYFQ 394
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 117/229 (51%), Gaps = 18/229 (7%)
Query: 108 SGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANK 166
S G++++ +L + K + D FS ++S + ++ G S Y +++F++ +A+
Sbjct: 18 SRFGSLYVGDLSPDVTEKDLIDKFSLNVPVVSVHLCRNSVTGKSMCYAYINFDSPFSASN 77
Query: 167 SIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKL-FTNVYIKNFGEDFNDEKLKEMFE 225
++ ++N L K + I +R+ + + F N+Y+KN L+ MF
Sbjct: 78 AMTRLNHSDLKGKAMR----IMWSQRDLAYRRRTRTGFANLYVKNLDSSITSSCLERMFC 133
Query: 226 PYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERT 285
P+G+I S +V+ +G+S+GFGFV +++ + A A A +G V GK L+V + K ER
Sbjct: 134 PFGSILSCKVVEENGQSKGFGFVQFDTEQSAVSARSALHGSMVYGKKLFVAKFINKDERA 193
Query: 286 QELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITS 334
+ N+YVKNL +++ D+ L F+ +GT++S
Sbjct: 194 AMAGNQ------------DSTNVYVKNLIETVTDDCLHTLFSQYGTVSS 230
>gi|392339709|ref|XP_003753884.1| PREDICTED: LOW QUALITY PROTEIN: poly(A) binding protein,
cytoplasmic 1-like [Rattus norvegicus]
Length = 475
Score = 203 bits (516), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 113/234 (48%), Positives = 136/234 (58%), Gaps = 38/234 (16%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G + QP D ERALDTMNF+ +KG+PIRIMWS RDP LR+SG+GN+FIKNL+ SI
Sbjct: 53 GYAYINFQQP--ADAERALDTMNFEMIKGQPIRIMWSHRDPGLRRSGMGNIFIKNLENSI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFS FGSILS KV +E G S+G+GFVHFET EAA K+I +NGMLLN
Sbjct: 111 DNKALYDTFSTFGSILSSKVVYNEHG-SRGFGFVHFETHEAAQKAINTMNGMLLND---- 165
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDGKS 242
RK R A L I + ++VM S
Sbjct: 166 ------RKVRSDYPWSLASLCPATLIS---------------------SCFQVMTESSHS 198
Query: 243 RGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAER----TQELKRRF 292
+GFGFV + SPE A KAV NG+ V K LYV AQ+K ER T + +RR
Sbjct: 199 KGFGFVCFSSPEEATKAVTEMNGRIVGTKPLYVALAQRKEERKAILTNQYRRRL 252
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 86/157 (54%), Gaps = 7/157 (4%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQD-EQGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + +Y+ FS G+ILS +V +D S GY +++F+ A +++
Sbjct: 10 LSSLYVGDLHPDVTEAMLYEMFSPIGTILSIRVCRDVATRRSLGYAYINFQQPADAERAL 69
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N ++ G+ I ++ G + N++IKN +++ L + F +G
Sbjct: 70 DTMNFEMIK------GQPIRIMWSHRDPGLRRSGMGNIFIKNLENSIDNKALYDTFSTFG 123
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNG 265
+I S +V+ N+ SRGFGFV +E+ E A+KA+ NG
Sbjct: 124 SILSSKVVYNEHGSRGFGFVHFETHEAAQKAINTMNG 160
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 69/136 (50%), Gaps = 18/136 (13%)
Query: 203 FTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDG--KSRGFGFVAYESPEFAEKAV 260
+++Y+ + D + L EMF P GTI S RV + +S G+ ++ ++ P AE+A+
Sbjct: 10 LSSLYVGDLHPDVTEAMLYEMFSPIGTILSIRVCRDVATRRSLGYAYINFQQPADAERAL 69
Query: 261 QAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDE 320
N + + G+ + + + + L R N+++KNL++SID++
Sbjct: 70 DTMNFEMIKGQPIRIMWSHRDPG----------------LRRSGMGNIFIKNLENSIDNK 113
Query: 321 RLRKEFTPFGTITSAK 336
L F+ FG+I S+K
Sbjct: 114 ALYDTFSTFGSILSSK 129
>gi|126649325|ref|XP_001388334.1| poly(a)-binding protein fabm [Cryptosporidium parvum Iowa II]
gi|32398879|emb|CAD98589.1| putative poly(a)-binding protein fabm, possible [Cryptosporidium
parvum]
gi|126117428|gb|EAZ51528.1| poly(a)-binding protein fabm, putative [Cryptosporidium parvum Iowa
II]
Length = 746
Score = 202 bits (514), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 95/189 (50%), Positives = 136/189 (71%), Gaps = 4/189 (2%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D ERALDT+NF ++GRP RIMW RDP+ R++ GNVF+KNLDKSIDNK ++DTFS FG
Sbjct: 65 DAERALDTLNFTCIRGRPCRIMWCLRDPASRRNNDGNVFVKNLDKSIDNKTLFDTFSLFG 124
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+I+SCK+A D +G S GYGF+HFE ++A ++I ++NG +L + ++VGKF + ER
Sbjct: 125 NIMSCKIATDVEGKSLGYGFIHFEHADSAKEAISRLNGAVLGDRPIYVGKFQKKAER--- 181
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEF 255
EK K FTNVY+K+ + + ++ L ++F YG I+S V+ +D K R FGFV +E+P+
Sbjct: 182 FSEKDKTFTNVYVKHIPKSWTEDLLYKIFGVYGKISSL-VLQSDSKGRPFGFVNFENPDS 240
Query: 256 AEKAVQAWN 264
A+ AV A +
Sbjct: 241 AKAAVAALH 249
Score = 95.1 bits (235), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 83/261 (31%), Positives = 119/261 (45%), Gaps = 31/261 (11%)
Query: 80 ALDTMNFDALKGRPIRIMWSQRDP---SLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGS 136
A+ +N L RPI + Q+ S + NV++K++ KS +Y F +G
Sbjct: 156 AISRLNGAVLGDRPIYVGKFQKKAERFSEKDKTFTNVYVKHIPKSWTEDLLYKIFGVYGK 215
Query: 137 ILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKEL 196
I S + D +G + +GFV+FE ++A ++ L N+ + VG +
Sbjct: 216 ISSLVLQSDSKG--RPFGFVNFENPDSAKAAV----AALHNALVTPVGVELDSTAETPVD 269
Query: 197 GEKAKLFTNVYIKNFGEDFNDEKL---KEMFEPYGTITSYRVMNNDGKSRGFGFVAYESP 253
E + GE N ++ + + GT N DG
Sbjct: 270 NEAGADSETSSKQESGEASNKKQTASGEASKDSSGTSNEESAQNEDGS------------ 317
Query: 254 EFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNL 313
A+K V A +V LYV RAQKK ER LK + E +K E RYQGVNLYVKNL
Sbjct: 318 --ADKNVSA----DVQPNRLYVSRAQKKNERQVVLKSQHEAVK-ESHQRYQGVNLYVKNL 370
Query: 314 DDSIDDERLRKEFTPFGTITS 334
DSI++E LR F PFGT++S
Sbjct: 371 ADSINEEDLRSMFEPFGTVSS 391
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 114/226 (50%), Gaps = 25/226 (11%)
Query: 113 VFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSIEKV 171
+++ +LD + +Y+ F++ + S ++ +D S GY +V++ + A ++++ +
Sbjct: 14 LYVGDLDADVTETMLYEIFNSVAVVSSVRICRDALTRRSLGYAYVNYNSVADAERALDTL 73
Query: 172 NGMLLNSKIVFVGKFI--PRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGT 229
N + + + + P R + NV++KN + +++ L + F +G
Sbjct: 74 NFTCIRGRPCRIMWCLRDPASRRNND--------GNVFVKNLDKSIDNKTLFDTFSLFGN 125
Query: 230 ITSYRVMNN-DGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S ++ + +GKS G+GF+ +E + A++A+ NG + + +YVG+ QKKAER E
Sbjct: 126 IMSCKIATDVEGKSLGYGFIHFEHADSAKEAISRLNGAVLGDRPIYVGKFQKKAERFSEK 185
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITS 334
+ F N+YVK++ S ++ L K F +G I+S
Sbjct: 186 DKTF-------------TNVYVKHIPKSWTEDLLYKIFGVYGKISS 218
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 60/89 (67%), Gaps = 1/89 (1%)
Query: 205 NVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAW 263
N+Y+KN + N+E L+ MFEP+GT++S + ++ G SRGFGFV++ SP+ A KA+
Sbjct: 364 NLYVKNLADSINEEDLRSMFEPFGTVSSVSIKTDESGVSRGFGFVSFLSPDEATKAITEM 423
Query: 264 NGKEVDGKILYVGRAQKKAERTQELKRRF 292
+ K V GK LYVG ++K +R L++R
Sbjct: 424 HLKLVRGKPLYVGLHERKEQRALRLQQRI 452
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 57/96 (59%), Gaps = 1/96 (1%)
Query: 106 RKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAAN 165
R GV N+++KNL SI+ + + F FG++ S + DE G S+G+GFV F + + A
Sbjct: 359 RYQGV-NLYVKNLADSINEEDLRSMFEPFGTVSSVSIKTDESGVSRGFGFVSFLSPDEAT 417
Query: 166 KSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAK 201
K+I +++ L+ K ++VG +++R L ++ +
Sbjct: 418 KAITEMHLKLVRGKPLYVGLHERKEQRALRLQQRIR 453
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 59/135 (43%), Gaps = 18/135 (13%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQ 261
++Y+ + D + L E+F ++S R+ + +S G+ +V Y S AE+A+
Sbjct: 12 ASLYVGDLDADVTETMLYEIFNSVAVVSSVRICRDALTRRSLGYAYVNYNSVADAERALD 71
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDER 321
N + G+ R L+ R N++VKNLD SID++
Sbjct: 72 TLNFTCIRGRPC----------------RIMWCLRDPASRRNNDGNVFVKNLDKSIDNKT 115
Query: 322 LRKEFTPFGTITSAK 336
L F+ FG I S K
Sbjct: 116 LFDTFSLFGNIMSCK 130
>gi|67623121|ref|XP_667843.1| poly(a)-binding protein fabm [Cryptosporidium hominis TU502]
gi|54659004|gb|EAL37605.1| poly(a)-binding protein fabm [Cryptosporidium hominis]
Length = 746
Score = 202 bits (514), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 95/189 (50%), Positives = 136/189 (71%), Gaps = 4/189 (2%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D ERALDT+NF ++GRP RIMW RDP+ R++ GNVF+KNLDKSIDNK ++DTFS FG
Sbjct: 65 DAERALDTLNFTCIRGRPCRIMWCLRDPASRRNNDGNVFVKNLDKSIDNKTLFDTFSLFG 124
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+I+SCK+A D +G S GYGF+HFE ++A ++I ++NG +L + ++VGKF + ER
Sbjct: 125 NIMSCKIATDVEGKSLGYGFIHFEHADSAKEAISRLNGAVLGDRPIYVGKFQKKAER--- 181
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEF 255
EK K FTNVY+K+ + + ++ L ++F YG I+S V+ +D K R FGFV +E+P+
Sbjct: 182 FSEKDKTFTNVYVKHIPKSWTEDLLYKIFGVYGKISSL-VLQSDSKGRPFGFVNFENPDS 240
Query: 256 AEKAVQAWN 264
A+ AV A +
Sbjct: 241 AKAAVAALH 249
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 83/261 (31%), Positives = 119/261 (45%), Gaps = 31/261 (11%)
Query: 80 ALDTMNFDALKGRPIRIMWSQRDP---SLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGS 136
A+ +N L RPI + Q+ S + NV++K++ KS +Y F +G
Sbjct: 156 AISRLNGAVLGDRPIYVGKFQKKAERFSEKDKTFTNVYVKHIPKSWTEDLLYKIFGVYGK 215
Query: 137 ILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKEL 196
I S + D +G + +GFV+FE ++A ++ L N+ + VG +
Sbjct: 216 ISSLVLQSDSKG--RPFGFVNFENPDSAKAAV----AALHNALVTPVGVELDSTAETSAD 269
Query: 197 GEKAKLFTNVYIKNFGEDFNDEKL---KEMFEPYGTITSYRVMNNDGKSRGFGFVAYESP 253
E + GE N ++ + + GT N DG
Sbjct: 270 NEAGADSETSSKQESGEASNKKQTASSETSKDSSGTSNEEFAQNEDGS------------ 317
Query: 254 EFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNL 313
A+K V A +V LYV RAQKK ER LK + E +K E RYQGVNLYVKNL
Sbjct: 318 --ADKNVSA----DVQPNRLYVSRAQKKNERQVVLKSQHEAVK-ESHQRYQGVNLYVKNL 370
Query: 314 DDSIDDERLRKEFTPFGTITS 334
DSI++E LR F PFGT++S
Sbjct: 371 ADSINEEDLRSMFEPFGTVSS 391
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 115/228 (50%), Gaps = 25/228 (10%)
Query: 111 GNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSIE 169
++++ +LD + +Y+ F++ + S ++ +D S GY +V++ + A ++++
Sbjct: 12 ASLYVGDLDADVTETMLYEIFNSVAVVSSVRICRDALTRRSLGYAYVNYNSVADAERALD 71
Query: 170 KVNGMLLNSKIVFVGKFI--PRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPY 227
+N + + + + P R + NV++KN + +++ L + F +
Sbjct: 72 TLNFTCIRGRPCRIMWCLRDPASRRNND--------GNVFVKNLDKSIDNKTLFDTFSLF 123
Query: 228 GTITSYRVMNN-DGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQ 286
G I S ++ + +GKS G+GF+ +E + A++A+ NG + + +YVG+ QKKAER
Sbjct: 124 GNIMSCKIATDVEGKSLGYGFIHFEHADSAKEAISRLNGAVLGDRPIYVGKFQKKAERFS 183
Query: 287 ELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITS 334
E + F N+YVK++ S ++ L K F +G I+S
Sbjct: 184 EKDKTF-------------TNVYVKHIPKSWTEDLLYKIFGVYGKISS 218
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 60/89 (67%), Gaps = 1/89 (1%)
Query: 205 NVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAW 263
N+Y+KN + N+E L+ MFEP+GT++S + ++ G SRGFGFV++ SP+ A KA+
Sbjct: 364 NLYVKNLADSINEEDLRSMFEPFGTVSSVSIKTDESGVSRGFGFVSFLSPDEATKAITEM 423
Query: 264 NGKEVDGKILYVGRAQKKAERTQELKRRF 292
+ K V GK LYVG ++K +R L++R
Sbjct: 424 HLKLVRGKPLYVGLHERKEQRALRLQQRI 452
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 57/96 (59%), Gaps = 1/96 (1%)
Query: 106 RKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAAN 165
R GV N+++KNL SI+ + + F FG++ S + DE G S+G+GFV F + + A
Sbjct: 359 RYQGV-NLYVKNLADSINEEDLRSMFEPFGTVSSVSIKTDESGVSRGFGFVSFLSPDEAT 417
Query: 166 KSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAK 201
K+I +++ L+ K ++VG +++R L ++ +
Sbjct: 418 KAITEMHLKLVRGKPLYVGLHERKEQRALRLQQRIR 453
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 59/135 (43%), Gaps = 18/135 (13%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQ 261
++Y+ + D + L E+F ++S R+ + +S G+ +V Y S AE+A+
Sbjct: 12 ASLYVGDLDADVTETMLYEIFNSVAVVSSVRICRDALTRRSLGYAYVNYNSVADAERALD 71
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDER 321
N + G+ R L+ R N++VKNLD SID++
Sbjct: 72 TLNFTCIRGRPC----------------RIMWCLRDPASRRNNDGNVFVKNLDKSIDNKT 115
Query: 322 LRKEFTPFGTITSAK 336
L F+ FG I S K
Sbjct: 116 LFDTFSLFGNIMSCK 130
>gi|294877113|ref|XP_002767904.1| protein HSH49, putative [Perkinsus marinus ATCC 50983]
gi|239869872|gb|EER00622.1| protein HSH49, putative [Perkinsus marinus ATCC 50983]
Length = 289
Score = 200 bits (509), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 98/194 (50%), Positives = 136/194 (70%), Gaps = 4/194 (2%)
Query: 74 MLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSA 133
+ D ERALDT+N+ + GRP R+MWS RDP+LR+SG GNV++KNLD++IDNKA+YDTFS
Sbjct: 100 VADAERALDTLNYSPINGRPCRLMWSHRDPALRRSGAGNVYVKNLDRNIDNKALYDTFSL 159
Query: 134 FGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKERE 193
FG+ILSCKVA G S+G+GFVHFE++E+A +I K+NGM + K V+V +F +K +
Sbjct: 160 FGNILSCKVALTPDGKSRGFGFVHFESDESAEAAIAKLNGMQIGEKTVYVAQF--KKTAD 217
Query: 194 KELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDGKSRGFGFVAYESP 253
+ G K FTNVYIK+ + +EK++E F +G ITS+ M D K R F FV +
Sbjct: 218 RSDGSP-KNFTNVYIKHIPPSWTEEKIREEFGAFGEITSF-AMQTDPKGRRFAFVNFAEF 275
Query: 254 EFAEKAVQAWNGKE 267
E A AV+ +G++
Sbjct: 276 EQARAAVEDMDGED 289
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 121/240 (50%), Gaps = 26/240 (10%)
Query: 102 DPSLRKSGV-----GNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGF 155
DP+ GV +++ +L ++ +Y+ F+ G + S +V +D S GY +
Sbjct: 35 DPAPTVGGVPTQQFASLYAGDLAPDVNEAVLYEVFNGIGPVASIRVCRDSVTRKSLGYAY 94
Query: 156 VHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDF 215
++F A ++++ +N +N + + R+ L NVY+KN +
Sbjct: 95 INFHNVADAERALDTLNYSPINGRPCR----LMWSHRDPALRRSGA--GNVYVKNLDRNI 148
Query: 216 NDEKLKEMFEPYGTITSYRV-MNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILY 274
+++ L + F +G I S +V + DGKSRGFGFV +ES E AE A+ NG ++ K +Y
Sbjct: 149 DNKALYDTFSLFGNILSCKVALTPDGKSRGFGFVHFESDESAEAAIAKLNGMQIGEKTVY 208
Query: 275 VGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITS 334
V + +K A+R+ + F N+Y+K++ S +E++R+EF FG ITS
Sbjct: 209 VAQFKKTADRSDGSPKNF-------------TNVYIKHIPPSWTEEKIREEFGAFGEITS 255
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 64/142 (45%), Gaps = 18/142 (12%)
Query: 197 GEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND--GKSRGFGFVAYESPE 254
G + F ++Y + D N+ L E+F G + S RV + KS G+ ++ + +
Sbjct: 42 GVPTQQFASLYAGDLAPDVNEAVLYEVFNGIGPVASIRVCRDSVTRKSLGYAYINFHNVA 101
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
AE+A+ N ++G+ + + + L R N+YVKNLD
Sbjct: 102 DAERALDTLNYSPINGRPCRLMWSHRDPA----------------LRRSGAGNVYVKNLD 145
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
+ID++ L F+ FG I S K
Sbjct: 146 RNIDNKALYDTFSLFGNILSCK 167
>gi|281340677|gb|EFB16261.1| hypothetical protein PANDA_006204 [Ailuropoda melanoleuca]
Length = 196
Score = 197 bits (500), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 95/155 (61%), Positives = 119/155 (76%), Gaps = 6/155 (3%)
Query: 69 LGQPY-----MLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSID 123
LG Y + D ++ALDTMNFD +KG+PIR+MWSQRD LRKSG+GNVFIKNLDKSID
Sbjct: 43 LGYAYVNFLKLADAQKALDTMNFDMIKGKPIRLMWSQRDAYLRKSGIGNVFIKNLDKSID 102
Query: 124 NKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFV 183
NK +Y+ FSAFG ILS KV D+QG S+GY FVHF+ + AA+++IE++NG LL +FV
Sbjct: 103 NKTLYEHFSAFGKILSSKVMSDDQG-SRGYAFVHFQNQNAADRAIEEMNGALLKDCRLFV 161
Query: 184 GKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDE 218
G+F RK+RE EL K FTNVY+KNFG+D +DE
Sbjct: 162 GRFKNRKDREAELQNKVNEFTNVYVKNFGDDMDDE 196
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 111/211 (52%), Gaps = 17/211 (8%)
Query: 111 GNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQD-EQGNSKGYGFVHFETEEAANKSIE 169
++++ +L + ++ FSA G +LS ++ +D S GY +V+F A K+++
Sbjct: 2 ASLYVGDLSADVTEDLLFKKFSAVGPVLSIRICRDLVTRRSLGYAYVNFLKLADAQKALD 61
Query: 170 KVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGT 229
+N ++ GK I +++ + NV+IKN + +++ L E F +G
Sbjct: 62 TMNFDMIK------GKPIRLMWSQRDAYLRKSGIGNVFIKNLDKSIDNKTLYEHFSAFGK 115
Query: 230 ITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELK 289
I S +VM++D SRG+ FV +++ A++A++ NG + L+VGR + + +R EL+
Sbjct: 116 ILSSKVMSDDQGSRGYAFVHFQNQNAADRAIEEMNGALLKDCRLFVGRFKNRKDREAELQ 175
Query: 290 RRFEMLKIERLNRYQGVNLYVKNLDDSIDDE 320
++N + N+YVKN D +DDE
Sbjct: 176 --------NKVNEF--TNVYVKNFGDDMDDE 196
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 65/136 (47%), Gaps = 20/136 (14%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQ 261
++Y+ + D ++ L + F G + S R+ + +S G+ +V + A+KA+
Sbjct: 2 ASLYVGDLSADVTEDLLFKKFSAVGPVLSIRICRDLVTRRSLGYAYVNFLKLADAQKALD 61
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGV-NLYVKNLDDSIDDE 320
N + GK + + +Q+ A R G+ N+++KNLD SID++
Sbjct: 62 TMNFDMIKGKPIRLMWSQRDAYL-----------------RKSGIGNVFIKNLDKSIDNK 104
Query: 321 RLRKEFTPFGTITSAK 336
L + F+ FG I S+K
Sbjct: 105 TLYEHFSAFGKILSSK 120
>gi|441675859|ref|XP_003280927.2| PREDICTED: uncharacterized protein LOC100588478 [Nomascus
leucogenys]
Length = 485
Score = 196 bits (499), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 95/156 (60%), Positives = 122/156 (78%), Gaps = 3/156 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP +D +RAL+T+NFD +KGRP+RIMWSQRDPSLRKSGVGNVFIKNL K+I
Sbjct: 329 GYAYVNYQQP--VDAKRALETLNFDVIKGRPVRIMWSQRDPSLRKSGVGNVFIKNLGKTI 386
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+Y+ FSAFG+ILSCKVA DE+G KGYGFVHF+ +E+A ++I+ +NGM LN + +F
Sbjct: 387 DNKALYNIFSAFGNILSCKVACDEKG-PKGYGFVHFQKQESAERAIDVMNGMFLNYRKIF 445
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDE 218
VG+F KERE E G A+ T+ +K+F ED ++E
Sbjct: 446 VGRFKSHKEREAERGAWARQSTSADVKDFEEDTDEE 481
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 97/179 (54%), Gaps = 7/179 (3%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + +Y+ FS G ILS ++ +D+ S GY +V+++ A +++
Sbjct: 286 MASLYVGDLHPEVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQPVDAKRAL 345
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
E +N ++ + V + +R+ L + NV+IKN G+ +++ L +F +G
Sbjct: 346 ETLNFDVIKGRPVRIMW----SQRDPSL--RKSGVGNVFIKNLGKTIDNKALYNIFSAFG 399
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQE 287
I S +V ++ +G+GFV ++ E AE+A+ NG ++ + ++VGR + ER E
Sbjct: 400 NILSCKVACDEKGPKGYGFVHFQKQESAERAIDVMNGMFLNYRKIFVGRFKSHKEREAE 458
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 64/137 (46%), Gaps = 20/137 (14%)
Query: 203 FTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAV 260
++Y+ + + + L E F P G I S R+ + +S G+ +V Y+ P A++A+
Sbjct: 286 MASLYVGDLHPEVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQPVDAKRAL 345
Query: 261 QAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGV-NLYVKNLDDSIDD 319
+ N + G+ + + +Q+ R GV N+++KNL +ID+
Sbjct: 346 ETLNFDVIKGRPVRIMWSQRDPSL-----------------RKSGVGNVFIKNLGKTIDN 388
Query: 320 ERLRKEFTPFGTITSAK 336
+ L F+ FG I S K
Sbjct: 389 KALYNIFSAFGNILSCK 405
>gi|395754119|ref|XP_002831853.2| PREDICTED: uncharacterized protein LOC100437512 [Pongo abelii]
Length = 528
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 95/156 (60%), Positives = 122/156 (78%), Gaps = 3/156 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP +D +RAL+T+NFD +KGRP+RIMWSQRDPSLRKSGVGNVFIKNL K+I
Sbjct: 372 GYAYVNYQQP--VDAKRALETLNFDVIKGRPVRIMWSQRDPSLRKSGVGNVFIKNLGKTI 429
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+Y+ FSAFG+ILSCKVA DE+G KGYGFVHF+ +E+A ++I+ +NGM LN + +F
Sbjct: 430 DNKALYNIFSAFGNILSCKVACDEKG-PKGYGFVHFQKQESAERAIDVMNGMFLNYRKIF 488
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDE 218
VG+F KERE E G A+ T+ +K+F ED ++E
Sbjct: 489 VGRFKSHKEREAERGAWARQSTSADVKDFEEDTDEE 524
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 97/179 (54%), Gaps = 7/179 (3%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + +Y+ FS G ILS ++ +D+ S GY +V+++ A +++
Sbjct: 329 MASLYVGDLHPEVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQPVDAKRAL 388
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
E +N ++ + V + +R+ L + NV+IKN G+ +++ L +F +G
Sbjct: 389 ETLNFDVIKGRPVRIMW----SQRDPSLRKSG--VGNVFIKNLGKTIDNKALYNIFSAFG 442
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQE 287
I S +V ++ +G+GFV ++ E AE+A+ NG ++ + ++VGR + ER E
Sbjct: 443 NILSCKVACDEKGPKGYGFVHFQKQESAERAIDVMNGMFLNYRKIFVGRFKSHKEREAE 501
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 64/137 (46%), Gaps = 20/137 (14%)
Query: 203 FTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAV 260
++Y+ + + + L E F P G I S R+ + +S G+ +V Y+ P A++A+
Sbjct: 329 MASLYVGDLHPEVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQPVDAKRAL 388
Query: 261 QAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGV-NLYVKNLDDSIDD 319
+ N + G+ + + +Q+ R GV N+++KNL +ID+
Sbjct: 389 ETLNFDVIKGRPVRIMWSQRDPSL-----------------RKSGVGNVFIKNLGKTIDN 431
Query: 320 ERLRKEFTPFGTITSAK 336
+ L F+ FG I S K
Sbjct: 432 KALYNIFSAFGNILSCK 448
>gi|380799249|gb|AFE71500.1| polyadenylate-binding protein 5, partial [Macaca mulatta]
Length = 256
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 110/207 (53%), Positives = 157/207 (75%), Gaps = 3/207 (1%)
Query: 132 SAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKE 191
SAFG+ILSCKV D+ G SKGY +VHF++ AAN++I +NG+ LN++ V+VG+F +E
Sbjct: 1 SAFGNILSCKVVCDDNG-SKGYAYVHFDSLAAANRAIWHMNGVRLNNRQVYVGRFKFPEE 59
Query: 192 REKELGEKAK-LFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGKSRGFGFVA 249
R E+ + + FTNV++KN G+D +DEKLKE+F YG S +V+ + GKS+GFGFV
Sbjct: 60 RAAEVRTRDRATFTNVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVR 119
Query: 250 YESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLY 309
YE+ E A+KAV +GK +DGK+LYVGRAQKK ER EL+RRFE L+++ +R GV +Y
Sbjct: 120 YETHEAAQKAVLDLHGKSIDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPIY 179
Query: 310 VKNLDDSIDDERLRKEFTPFGTITSAK 336
+KNLD++I+DE+L++EF+ FG+I+ AK
Sbjct: 180 IKNLDETINDEKLKEEFSSFGSISRAK 206
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 71/183 (38%), Positives = 108/183 (59%), Gaps = 12/183 (6%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NVF+KN+ ID++ + + F +G S KV +D G SKG+GFV +ET EAA K++ +
Sbjct: 74 NVFVKNIGDDIDDEKLKELFCEYGPTESVKVIRDASGKSKGFGFVRYETHEAAQKAVLDL 133
Query: 172 NGMLLNSKIVFVGKFIPRKER---------EKELGEKAK-LFTNVYIKNFGEDFNDEKLK 221
+G ++ K+++VG+ + ER L EK++ +YIKN E NDEKLK
Sbjct: 134 HGKSIDGKVLYVGRAQKKIERLAELRRRFERLRLKEKSRPPGVPIYIKNLDETINDEKLK 193
Query: 222 EMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYV--GRAQ 279
E F +G+I+ +VM G+ +GFG V + S E A KAV NG+ V K L+V G+A+
Sbjct: 194 EEFSSFGSISRAKVMMEVGQGKGFGVVCFSSFEEATKAVDEMNGRVVGSKPLHVTLGQAR 253
Query: 280 KKA 282
++
Sbjct: 254 RRC 256
>gi|426396432|ref|XP_004064447.1| PREDICTED: uncharacterized protein LOC101125114 [Gorilla gorilla
gorilla]
Length = 533
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 95/156 (60%), Positives = 122/156 (78%), Gaps = 3/156 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP +D +RAL+T+NFD +KGRP+RIMWSQRDPSLRKSGVGNVFIKNL K+I
Sbjct: 377 GYAYVNYQQP--VDAKRALETLNFDVIKGRPVRIMWSQRDPSLRKSGVGNVFIKNLGKTI 434
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+Y+ FSAFG+ILSCKVA DE+G KGYGFVHF+ +E+A ++I+ +NGM LN + +F
Sbjct: 435 DNKALYNIFSAFGNILSCKVACDEKG-PKGYGFVHFQKQESAERAIDVMNGMFLNYRKIF 493
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDE 218
VG+F KERE E G A+ T+ +K+F ED ++E
Sbjct: 494 VGRFKSHKEREAERGAWARQSTSADVKDFEEDTDEE 529
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 97/179 (54%), Gaps = 7/179 (3%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + +Y+ FS G ILS ++ +D+ S GY +V+++ A +++
Sbjct: 334 MASLYVGDLHPEVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQPVDAKRAL 393
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
E +N ++ + V + +R+ L + NV+IKN G+ +++ L +F +G
Sbjct: 394 ETLNFDVIKGRPVRIMW----SQRDPSL--RKSGVGNVFIKNLGKTIDNKALYNIFSAFG 447
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQE 287
I S +V ++ +G+GFV ++ E AE+A+ NG ++ + ++VGR + ER E
Sbjct: 448 NILSCKVACDEKGPKGYGFVHFQKQESAERAIDVMNGMFLNYRKIFVGRFKSHKEREAE 506
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 64/137 (46%), Gaps = 20/137 (14%)
Query: 203 FTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAV 260
++Y+ + + + L E F P G I S R+ + +S G+ +V Y+ P A++A+
Sbjct: 334 MASLYVGDLHPEVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQPVDAKRAL 393
Query: 261 QAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGV-NLYVKNLDDSIDD 319
+ N + G+ + + +Q+ R GV N+++KNL +ID+
Sbjct: 394 ETLNFDVIKGRPVRIMWSQRDPSL-----------------RKSGVGNVFIKNLGKTIDN 436
Query: 320 ERLRKEFTPFGTITSAK 336
+ L F+ FG I S K
Sbjct: 437 KALYNIFSAFGNILSCK 453
>gi|296470851|tpg|DAA12966.1| TPA: PABPC1L2B protein-like [Bos taurus]
Length = 489
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 95/156 (60%), Positives = 122/156 (78%), Gaps = 3/156 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP +D +RAL+T+NFD +KGRP+RIMWSQRDPSLRKSGVGNVFIKNL K+I
Sbjct: 333 GYAYVNYQQP--VDAKRALETLNFDVIKGRPVRIMWSQRDPSLRKSGVGNVFIKNLGKTI 390
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+Y+ FSAFG+ILSCKVA DE+G KGYGFVHF+ +E+A ++I+ +NGM LN + +F
Sbjct: 391 DNKALYNIFSAFGNILSCKVACDEKG-PKGYGFVHFQKQESAERAIDAMNGMFLNYRKIF 449
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDE 218
VG+F KERE E G A+ T+ +K+F ED ++E
Sbjct: 450 VGRFKSHKEREAERGAWARQSTSADVKDFEEDTDEE 485
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 104/190 (54%), Gaps = 10/190 (5%)
Query: 99 SQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVH 157
S+R+P+ + ++++ +L + +Y+ FS G ILS ++ +D+ S GY +V+
Sbjct: 282 SERNPNF---PMASLYVGDLHPEVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVN 338
Query: 158 FETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFND 217
++ A +++E +N ++ + V I +R+ L + NV+IKN G+ ++
Sbjct: 339 YQQPVDAKRALETLNFDVIKGRPVR----IMWSQRDPSLRKSG--VGNVFIKNLGKTIDN 392
Query: 218 EKLKEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGR 277
+ L +F +G I S +V ++ +G+GFV ++ E AE+A+ A NG ++ + ++VGR
Sbjct: 393 KALYNIFSAFGNILSCKVACDEKGPKGYGFVHFQKQESAERAIDAMNGMFLNYRKIFVGR 452
Query: 278 AQKKAERTQE 287
+ ER E
Sbjct: 453 FKSHKEREAE 462
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 64/137 (46%), Gaps = 20/137 (14%)
Query: 203 FTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND--GKSRGFGFVAYESPEFAEKAV 260
++Y+ + + + L E F P G I S R+ + +S G+ +V Y+ P A++A+
Sbjct: 290 MASLYVGDLHPEVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQPVDAKRAL 349
Query: 261 QAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGV-NLYVKNLDDSIDD 319
+ N + G+ + + +Q+ R GV N+++KNL +ID+
Sbjct: 350 ETLNFDVIKGRPVRIMWSQRDPSL-----------------RKSGVGNVFIKNLGKTIDN 392
Query: 320 ERLRKEFTPFGTITSAK 336
+ L F+ FG I S K
Sbjct: 393 KALYNIFSAFGNILSCK 409
>gi|344281908|ref|XP_003412718.1| PREDICTED: hypothetical protein LOC100663984 [Loxodonta africana]
Length = 640
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 94/156 (60%), Positives = 121/156 (77%), Gaps = 3/156 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP +D +RAL+T+NFD +KGRP+RIMWSQRDPSLRKSGVGNVFIKNL K+I
Sbjct: 484 GYAYVNYQQP--VDAKRALETLNFDVIKGRPVRIMWSQRDPSLRKSGVGNVFIKNLGKTI 541
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+Y+ FS FG+ILSCKVA DE+G KGYGFVHF+ +E+A ++I+ +NGM LN + +F
Sbjct: 542 DNKALYNIFSTFGNILSCKVACDEKG-PKGYGFVHFQEQESAERAIDVMNGMFLNYRKIF 600
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDE 218
VG+F KERE E G A+ T+ +K+F ED ++E
Sbjct: 601 VGRFKSHKEREAERGAWARQSTSADVKDFDEDTDEE 636
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 114/227 (50%), Gaps = 22/227 (9%)
Query: 95 RIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGY 153
RI+ + DP ++++ +L + +Y+ FS G ILS ++ +D+ S GY
Sbjct: 431 RIISASPDPP-----TASLYVGDLHPEVTEAMLYEKFSPAGRILSIRICRDKITRRSLGY 485
Query: 154 GFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGE 213
+V+++ A +++E +N ++ + V I +R+ L + NV+IKN G+
Sbjct: 486 AYVNYQQPVDAKRALETLNFDVIKGRPVR----IMWSQRDPSLRKSG--VGNVFIKNLGK 539
Query: 214 DFNDEKLKEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKIL 273
+++ L +F +G I S +V ++ +G+GFV ++ E AE+A+ NG ++ + +
Sbjct: 540 TIDNKALYNIFSTFGNILSCKVACDEKGPKGYGFVHFQEQESAERAIDVMNGMFLNYRKI 599
Query: 274 YVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDE 320
+VGR + ER E R + Q + VK+ D+ D+E
Sbjct: 600 FVGRFKSHKEREAE---RGAWAR-------QSTSADVKDFDEDTDEE 636
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 64/136 (47%), Gaps = 20/136 (14%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQ 261
++Y+ + + + L E F P G I S R+ + +S G+ +V Y+ P A++A++
Sbjct: 442 ASLYVGDLHPEVTEAMLYEKFSPAGRILSIRICRDKITRRSLGYAYVNYQQPVDAKRALE 501
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGV-NLYVKNLDDSIDDE 320
N + G+ + + +Q+ R GV N+++KNL +ID++
Sbjct: 502 TLNFDVIKGRPVRIMWSQRDPSL-----------------RKSGVGNVFIKNLGKTIDNK 544
Query: 321 RLRKEFTPFGTITSAK 336
L F+ FG I S K
Sbjct: 545 ALYNIFSTFGNILSCK 560
>gi|160331003|ref|XP_001712209.1| pab1 [Hemiselmis andersenii]
gi|159765656|gb|ABW97884.1| pab1 [Hemiselmis andersenii]
Length = 502
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 106/221 (47%), Positives = 145/221 (65%), Gaps = 5/221 (2%)
Query: 76 DTERALDTMN--FDALK-GRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFS 132
D ERAL +N FD K +P+R+MW Q+D L KSG GN+FIKNL D+K++ F
Sbjct: 93 DAERALTKLNYYFDPEKMKKPLRLMWYQKDKFLLKSGGGNIFIKNLPLFFDSKSLEKMFL 152
Query: 133 AFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKER 192
FG ILSCKVA DE G S GYGFVHFE E+A+ +IEK NG+++ K +FVG F+ RK+R
Sbjct: 153 DFGKILSCKVALDENGTSLGYGFVHFEDEKASKIAIEKTNGLIIGEKKIFVGPFLSRKDR 212
Query: 193 EKELGEKAKLFTNVYIKNFG-EDFNDEKLKEMFEPYGTITSYRVMNNDGKSRGFGFVAYE 251
K G FTN+YIKN E+ N+ +K++F+ +G ITS + N+ ++GF FV YE
Sbjct: 213 -KNFGMTKTGFTNIYIKNISPENCNETFIKDLFDIFGKITSIYIPKNNNFTKGFAFVNYE 271
Query: 252 SPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRF 292
PE AE A+ N K++ LYVG+A+ K ER + L+++F
Sbjct: 272 LPEEAEDAIFRMNKKKIKNLTLYVGKAETKIERQRHLQKKF 312
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 100/212 (47%), Gaps = 27/212 (12%)
Query: 131 FSAFGSILSCKVAQD-EQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPR 189
F G + S K+ +D G GY FV FE + A +++ K+N K+ +
Sbjct: 60 FLTIGPLKSVKIYRDISSGEFMGYCFVEFENFKDAERALTKLNYYFDPEKM--------K 111
Query: 190 KEREKELGEKAKLFT-----NVYIKNFGEDFNDEKLKEMFEPYGTITSYRV-MNNDGKSR 243
K +K K N++IKN F+ + L++MF +G I S +V ++ +G S
Sbjct: 112 KPLRLMWYQKDKFLLKSGGGNIFIKNLPLFFDSKSLEKMFLDFGKILSCKVALDENGTSL 171
Query: 244 GFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRY 303
G+GFV +E + ++ A++ NG + K ++VG + +R + F M K
Sbjct: 172 GYGFVHFEDEKASKIAIEKTNGLIIGEKKIFVGPFLSRKDR-----KNFGMTKT------ 220
Query: 304 QGVNLYVKNLDDSIDDERLRKE-FTPFGTITS 334
N+Y+KN+ +E K+ F FG ITS
Sbjct: 221 GFTNIYIKNISPENCNETFIKDLFDIFGKITS 252
Score = 37.4 bits (85), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 67/146 (45%), Gaps = 15/146 (10%)
Query: 193 EKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAY 250
E E+ + + T +Y+ + + +E ++++F G + S ++ + G+ G+ FV +
Sbjct: 29 ENEINKNSDQSTCLYVGDLPLNLKEEDIEKIFLTIGPLKSVKIYRDISSGEFMGYCFVEF 88
Query: 251 ESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYV 310
E+ + AE+A+ N + KK R ++ +LK G N+++
Sbjct: 89 ENFKDAERALTKLN-------YYFDPEKMKKPLRLMWYQKDKFLLK------SGGGNIFI 135
Query: 311 KNLDDSIDDERLRKEFTPFGTITSAK 336
KNL D + L K F FG I S K
Sbjct: 136 KNLPLFFDSKSLEKMFLDFGKILSCK 161
>gi|330843410|ref|XP_003293648.1| hypothetical protein DICPUDRAFT_158538 [Dictyostelium purpureum]
gi|325076001|gb|EGC29827.1| hypothetical protein DICPUDRAFT_158538 [Dictyostelium purpureum]
Length = 735
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 118/322 (36%), Positives = 182/322 (56%), Gaps = 43/322 (13%)
Query: 21 VATRELSAKVVEGVSRSLSSLIDGNTVK---YDWDSGYTCHQLGSGAILVQLGQPYMLDT 77
V EL +KV S+ D NT + Y + + Y H D
Sbjct: 134 VVLNELFSKVGRNAIASIHVCRDSNTYRSLGYAYVNFYNNH-----------------DA 176
Query: 78 ERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSI 137
ERALDT+N+ + G+P RIMWS RDP+ RK+ VGNVF+KNL+K++DN +YD FS+FG+I
Sbjct: 177 ERALDTLNYSMIHGKPCRIMWSYRDPTKRKTNVGNVFVKNLEKAVDNAMLYDVFSSFGNI 236
Query: 138 LSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELG 197
LSCKV + E+G SKGYG+VHFET E++ K+IE++NG L+ K +F F+ + ER
Sbjct: 237 LSCKV-EYEKGISKGYGYVHFETSESSGKAIERINGTLVLGKPIFCEPFVAKVER----- 290
Query: 198 EKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRV-MNNDGKSRGFGFVAYESPEFA 256
K+ V+ +N E E ++E +G I + +++ GKS+G G V +++ E A
Sbjct: 291 --YKVENKVFFRNADESVTQEMIQEELSKFGEIEICTLKIDSTGKSKGLGTVEFKNCEDA 348
Query: 257 EK--AVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
+K AV+A + +++GK + R + K ER EL++ + L++ N+D
Sbjct: 349 QKLLAVEA-DSIQINGKPITFDRVKNKIERVTELRK-----------KTTDQTLFLSNID 396
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
+SI+ E +++EF+ G I K
Sbjct: 397 ESIEKETIKEEFSKHGAIIGCK 418
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 104/209 (49%), Gaps = 6/209 (2%)
Query: 79 RALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGN-VFIKNLDKSIDNKAMYDTFSAFGSI 137
+A++ +N + G+PI + + V N VF +N D+S+ + + + S FG I
Sbjct: 264 KAIERINGTLVLGKPI--FCEPFVAKVERYKVENKVFFRNADESVTQEMIQEELSKFGEI 321
Query: 138 LSCKVAQDEQGNSKGYGFVHFETEEAANKSIE-KVNGMLLNSKIVFVGKFIPRKEREKEL 196
C + D G SKG G V F+ E A K + + + + +N K + + + ER EL
Sbjct: 322 EICTLKIDSTGKSKGLGTVEFKNCEDAQKLLAVEADSIQINGKPITFDRVKNKIERVTEL 381
Query: 197 GEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEF 255
+K T +++ N E E +KE F +G I +++ ++ GK++G+GF+ +
Sbjct: 382 RKKTTDQT-LFLSNIDESIEKETIKEEFSKHGAIIGCKIVQDESGKNKGYGFITFSEVSE 440
Query: 256 AEKAVQAWNGKEVDGKILYVGRAQKKAER 284
A KA++A NG K + V + K ++
Sbjct: 441 ANKALEALNGFTFGNKQITVSLSSNKEQQ 469
Score = 43.9 bits (102), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 63/138 (45%), Gaps = 20/138 (14%)
Query: 203 FTNVYIKNFGEDFNDEKLKEMFEPYG--TITSYRVM--NNDGKSRGFGFVAYESPEFAEK 258
T++Y+ + D N+ L E+F G I S V +N +S G+ +V + + AE+
Sbjct: 119 LTSLYVGDLASDVNEVVLNELFSKVGRNAIASIHVCRDSNTYRSLGYAYVNFYNNHDAER 178
Query: 259 AVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSID 318
A+ N + GK + + + KR+ + N++VKNL+ ++D
Sbjct: 179 ALDTLNYSMIHGKPCRIMWSYRDP-----TKRKTNV-----------GNVFVKNLEKAVD 222
Query: 319 DERLRKEFTPFGTITSAK 336
+ L F+ FG I S K
Sbjct: 223 NAMLYDVFSSFGNILSCK 240
>gi|426257244|ref|XP_004022242.1| PREDICTED: polyadenylate-binding protein 1-like 2 [Ovis aries]
Length = 200
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 95/156 (60%), Positives = 122/156 (78%), Gaps = 3/156 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP +D +RAL+T+NFD +KGRP+RIMWSQRDPSLRKSGVGNVFIKNL K+I
Sbjct: 44 GYAYVNYQQP--VDAKRALETLNFDVIKGRPVRIMWSQRDPSLRKSGVGNVFIKNLGKTI 101
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+Y+ FSAFG+ILSCKVA DE+G KGYGFVHF+ +E+A ++I+ +NGM LN + +F
Sbjct: 102 DNKALYNIFSAFGNILSCKVACDEKG-PKGYGFVHFQKQESAERAIDAMNGMFLNYRKIF 160
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDE 218
VG+F KERE E G A+ T+ +K+F ED ++E
Sbjct: 161 VGRFKSHKEREAERGAWARQSTSADVKDFEEDTDEE 196
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 98/179 (54%), Gaps = 7/179 (3%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + +Y+ FS G ILS ++ +D+ S GY +V+++ A +++
Sbjct: 1 MASLYVGDLHPEVTEAMLYEKFSPAGPILSIRLCRDKITRRSLGYAYVNYQQPVDAKRAL 60
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
E +N ++ + V I +R+ L + NV+IKN G+ +++ L +F +G
Sbjct: 61 ETLNFDVIKGRPVR----IMWSQRDPSLRKSG--VGNVFIKNLGKTIDNKALYNIFSAFG 114
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQE 287
I S +V ++ +G+GFV ++ E AE+A+ A NG ++ + ++VGR + ER E
Sbjct: 115 NILSCKVACDEKGPKGYGFVHFQKQESAERAIDAMNGMFLNYRKIFVGRFKSHKEREAE 173
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 64/136 (47%), Gaps = 20/136 (14%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQ 261
++Y+ + + + L E F P G I S R+ + +S G+ +V Y+ P A++A++
Sbjct: 2 ASLYVGDLHPEVTEAMLYEKFSPAGPILSIRLCRDKITRRSLGYAYVNYQQPVDAKRALE 61
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGV-NLYVKNLDDSIDDE 320
N + G+ + + +Q+ R GV N+++KNL +ID++
Sbjct: 62 TLNFDVIKGRPVRIMWSQRDPSL-----------------RKSGVGNVFIKNLGKTIDNK 104
Query: 321 RLRKEFTPFGTITSAK 336
L F+ FG I S K
Sbjct: 105 ALYNIFSAFGNILSCK 120
>gi|291407697|ref|XP_002720156.1| PREDICTED: polyadenylate-binding protein 1-like [Oryctolagus
cuniculus]
gi|301792853|ref|XP_002931393.1| PREDICTED: polyadenylate-binding protein 1-like 2-like [Ailuropoda
melanoleuca]
gi|311276495|ref|XP_003135232.1| PREDICTED: polyadenylate-binding protein 1-like 2-like [Sus scrofa]
gi|335306198|ref|XP_003360416.1| PREDICTED: polyadenylate-binding protein 1-like 2-like [Sus scrofa]
gi|281338845|gb|EFB14429.1| hypothetical protein PANDA_022442 [Ailuropoda melanoleuca]
Length = 200
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 95/156 (60%), Positives = 122/156 (78%), Gaps = 3/156 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP +D +RAL+T+NFD +KGRP+RIMWSQRDPSLRKSGVGNVFIKNL K+I
Sbjct: 44 GYAYVNYQQP--VDAKRALETLNFDVIKGRPVRIMWSQRDPSLRKSGVGNVFIKNLGKTI 101
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+Y+ FSAFG+ILSCKVA DE+G KGYGFVHF+ +E+A ++I+ +NGM LN + +F
Sbjct: 102 DNKALYNIFSAFGNILSCKVACDEKG-PKGYGFVHFQKQESAERAIDAMNGMFLNYRKIF 160
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDE 218
VG+F KERE E G A+ T+ +K+F ED ++E
Sbjct: 161 VGRFKSHKEREAERGAWARQSTSADVKDFEEDTDEE 196
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 98/179 (54%), Gaps = 7/179 (3%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + +Y+ FS G ILS ++ +D+ S GY +V+++ A +++
Sbjct: 1 MASLYVGDLHPEVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQPVDAKRAL 60
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
E +N ++ + V I +R+ L + NV+IKN G+ +++ L +F +G
Sbjct: 61 ETLNFDVIKGRPVR----IMWSQRDPSLRKSG--VGNVFIKNLGKTIDNKALYNIFSAFG 114
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQE 287
I S +V ++ +G+GFV ++ E AE+A+ A NG ++ + ++VGR + ER E
Sbjct: 115 NILSCKVACDEKGPKGYGFVHFQKQESAERAIDAMNGMFLNYRKIFVGRFKSHKEREAE 173
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 64/136 (47%), Gaps = 20/136 (14%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQ 261
++Y+ + + + L E F P G I S R+ + +S G+ +V Y+ P A++A++
Sbjct: 2 ASLYVGDLHPEVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQPVDAKRALE 61
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGV-NLYVKNLDDSIDDE 320
N + G+ + + +Q+ R GV N+++KNL +ID++
Sbjct: 62 TLNFDVIKGRPVRIMWSQRDPSL-----------------RKSGVGNVFIKNLGKTIDNK 104
Query: 321 RLRKEFTPFGTITSAK 336
L F+ FG I S K
Sbjct: 105 ALYNIFSAFGNILSCK 120
>gi|359081870|ref|XP_003588203.1| PREDICTED: poly(A) binding protein, cytoplasmic 1-like 2A [Bos
taurus]
gi|395862938|ref|XP_003803673.1| PREDICTED: polyadenylate-binding protein 1-like 2-like [Otolemur
garnettii]
Length = 200
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 95/156 (60%), Positives = 122/156 (78%), Gaps = 3/156 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP +D +RAL+T+NFD +KGRP+RIMWSQRDPSLRKSGVGNVFIKNL K+I
Sbjct: 44 GYAYVNYQQP--VDAKRALETLNFDVIKGRPVRIMWSQRDPSLRKSGVGNVFIKNLGKTI 101
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+Y+ FSAFG+ILSCKVA DE+G KGYGFVHF+ +E+A ++I+ +NGM LN + +F
Sbjct: 102 DNKALYNIFSAFGNILSCKVACDEKG-PKGYGFVHFQKQESAERAIDAMNGMFLNYRKIF 160
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDE 218
VG+F KERE E G A+ T+ +K+F ED ++E
Sbjct: 161 VGRFKSHKEREAERGAWARQSTSADVKDFEEDTDEE 196
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 98/179 (54%), Gaps = 7/179 (3%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + +Y+ FS G ILS ++ +D+ S GY +V+++ A +++
Sbjct: 1 MASLYVGDLHPEVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQPVDAKRAL 60
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
E +N ++ + V I +R+ L + NV+IKN G+ +++ L +F +G
Sbjct: 61 ETLNFDVIKGRPVR----IMWSQRDPSLRKSG--VGNVFIKNLGKTIDNKALYNIFSAFG 114
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQE 287
I S +V ++ +G+GFV ++ E AE+A+ A NG ++ + ++VGR + ER E
Sbjct: 115 NILSCKVACDEKGPKGYGFVHFQKQESAERAIDAMNGMFLNYRKIFVGRFKSHKEREAE 173
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 64/136 (47%), Gaps = 20/136 (14%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND--GKSRGFGFVAYESPEFAEKAVQ 261
++Y+ + + + L E F P G I S R+ + +S G+ +V Y+ P A++A++
Sbjct: 2 ASLYVGDLHPEVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQPVDAKRALE 61
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGV-NLYVKNLDDSIDDE 320
N + G+ + + +Q+ R GV N+++KNL +ID++
Sbjct: 62 TLNFDVIKGRPVRIMWSQRDPSL-----------------RKSGVGNVFIKNLGKTIDNK 104
Query: 321 RLRKEFTPFGTITSAK 336
L F+ FG I S K
Sbjct: 105 ALYNIFSAFGNILSCK 120
>gi|194228035|ref|XP_001914759.1| PREDICTED: polyadenylate-binding protein 1-like 2-like [Equus
caballus]
Length = 200
Score = 195 bits (495), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 95/156 (60%), Positives = 122/156 (78%), Gaps = 3/156 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP +D +RAL+T+NFD +KGRP+RIMWSQRDPSLRKSGVGNVFIKNL K+I
Sbjct: 44 GYAYVNYQQP--VDAKRALETLNFDVIKGRPVRIMWSQRDPSLRKSGVGNVFIKNLGKTI 101
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+Y+ FSAFG+ILSCKVA DE+G KGYGFVHF+ +E+A ++I+ +NGM LN + +F
Sbjct: 102 DNKALYNIFSAFGNILSCKVACDEKG-PKGYGFVHFQKQESAERAIDAMNGMFLNYRKIF 160
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDE 218
VG+F KERE E G A+ T+ +K+F ED ++E
Sbjct: 161 VGRFKSHKEREAERGAWARQSTSADVKDFEEDTDEE 196
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 97/179 (54%), Gaps = 7/179 (3%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + +Y+ F G ILS ++ +D+ S GY +V+++ A +++
Sbjct: 1 MASLYVGDLHPEVTEAMLYEKFRPAGPILSIRICRDKITRRSLGYAYVNYQQPVDAKRAL 60
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
E +N ++ + V I +R+ L + NV+IKN G+ +++ L +F +G
Sbjct: 61 ETLNFDVIKGRPVR----IMWSQRDPSLRKSG--VGNVFIKNLGKTIDNKALYNIFSAFG 114
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQE 287
I S +V ++ +G+GFV ++ E AE+A+ A NG ++ + ++VGR + ER E
Sbjct: 115 NILSCKVACDEKGPKGYGFVHFQKQESAERAIDAMNGMFLNYRKIFVGRFKSHKEREAE 173
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 64/136 (47%), Gaps = 20/136 (14%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND--GKSRGFGFVAYESPEFAEKAVQ 261
++Y+ + + + L E F P G I S R+ + +S G+ +V Y+ P A++A++
Sbjct: 2 ASLYVGDLHPEVTEAMLYEKFRPAGPILSIRICRDKITRRSLGYAYVNYQQPVDAKRALE 61
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGV-NLYVKNLDDSIDDE 320
N + G+ + + +Q+ R GV N+++KNL +ID++
Sbjct: 62 TLNFDVIKGRPVRIMWSQRDPSL-----------------RKSGVGNVFIKNLGKTIDNK 104
Query: 321 RLRKEFTPFGTITSAK 336
L F+ FG I S K
Sbjct: 105 ALYNIFSAFGNILSCK 120
>gi|119923699|ref|XP_599343.3| PREDICTED: poly(A) binding protein, cytoplasmic 1-like 2A [Bos
taurus]
gi|297493007|ref|XP_002700050.1| PREDICTED: poly(A) binding protein, cytoplasmic 1-like 2A [Bos
taurus]
gi|358420984|ref|XP_003584787.1| PREDICTED: poly(A) binding protein, cytoplasmic 1-like 2A [Bos
taurus]
gi|296470850|tpg|DAA12965.1| TPA: PABPC1L2B protein-like [Bos taurus]
gi|440892195|gb|ELR45496.1| Polyadenylate-binding protein 1-like 2 [Bos grunniens mutus]
Length = 200
Score = 195 bits (495), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 95/156 (60%), Positives = 122/156 (78%), Gaps = 3/156 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP +D +RAL+T+NFD +KGRP+RIMWSQRDPSLRKSGVGNVFIKNL K+I
Sbjct: 44 GYAYVNYQQP--VDAKRALETLNFDVIKGRPVRIMWSQRDPSLRKSGVGNVFIKNLGKTI 101
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+Y+ FSAFG+ILSCKVA DE+G KGYGFVHF+ +E+A ++I+ +NGM LN + +F
Sbjct: 102 DNKALYNIFSAFGNILSCKVACDEKG-PKGYGFVHFQKQESAERAIDAMNGMFLNYRKIF 160
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDE 218
VG+F KERE E G A+ T+ +K+F ED ++E
Sbjct: 161 VGRFKSHKEREAERGAWARQSTSADVKDFEEDTDEE 196
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 98/179 (54%), Gaps = 7/179 (3%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + +Y+ FS G ILS ++ +D+ S GY +V+++ A +++
Sbjct: 1 MASLYVGDLHPEVTEAMLYEKFSPAGPILSIRLCRDKITRRSLGYAYVNYQQPVDAKRAL 60
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
E +N ++ + V I +R+ L + NV+IKN G+ +++ L +F +G
Sbjct: 61 ETLNFDVIKGRPVR----IMWSQRDPSLRKSG--VGNVFIKNLGKTIDNKALYNIFSAFG 114
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQE 287
I S +V ++ +G+GFV ++ E AE+A+ A NG ++ + ++VGR + ER E
Sbjct: 115 NILSCKVACDEKGPKGYGFVHFQKQESAERAIDAMNGMFLNYRKIFVGRFKSHKEREAE 173
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 64/136 (47%), Gaps = 20/136 (14%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND--GKSRGFGFVAYESPEFAEKAVQ 261
++Y+ + + + L E F P G I S R+ + +S G+ +V Y+ P A++A++
Sbjct: 2 ASLYVGDLHPEVTEAMLYEKFSPAGPILSIRLCRDKITRRSLGYAYVNYQQPVDAKRALE 61
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGV-NLYVKNLDDSIDDE 320
N + G+ + + +Q+ R GV N+++KNL +ID++
Sbjct: 62 TLNFDVIKGRPVRIMWSQRDPSL-----------------RKSGVGNVFIKNLGKTIDNK 104
Query: 321 RLRKEFTPFGTITSAK 336
L F+ FG I S K
Sbjct: 105 ALYNIFSAFGNILSCK 120
>gi|395863403|ref|XP_003803885.1| PREDICTED: polyadenylate-binding protein 1-like 2-like, partial
[Otolemur garnettii]
Length = 203
Score = 195 bits (495), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 95/156 (60%), Positives = 122/156 (78%), Gaps = 3/156 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP +D +RAL+T+NFD +KGRP+RIMWSQRDPSLRKSGVGNVFIKNL K+I
Sbjct: 47 GYAYVNYQQP--VDAKRALETLNFDVIKGRPVRIMWSQRDPSLRKSGVGNVFIKNLGKTI 104
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+Y+ FSAFG+ILSCKVA DE+G KGYGFVHF+ +E+A ++I+ +NGM LN + +F
Sbjct: 105 DNKALYNIFSAFGNILSCKVACDEKG-PKGYGFVHFQKQESAERAIDAMNGMFLNYRKIF 163
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDE 218
VG+F KERE E G A+ T+ +K+F ED ++E
Sbjct: 164 VGRFKSHKEREAERGAWARQSTSADVKDFEEDTDEE 199
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 98/179 (54%), Gaps = 7/179 (3%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + +Y+ FS G ILS ++ +D+ S GY +V+++ A +++
Sbjct: 4 MASLYVGDLHPEVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQPVDAKRAL 63
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
E +N ++ + V I +R+ L + NV+IKN G+ +++ L +F +G
Sbjct: 64 ETLNFDVIKGRPVR----IMWSQRDPSLRKSG--VGNVFIKNLGKTIDNKALYNIFSAFG 117
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQE 287
I S +V ++ +G+GFV ++ E AE+A+ A NG ++ + ++VGR + ER E
Sbjct: 118 NILSCKVACDEKGPKGYGFVHFQKQESAERAIDAMNGMFLNYRKIFVGRFKSHKEREAE 176
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 64/136 (47%), Gaps = 20/136 (14%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND--GKSRGFGFVAYESPEFAEKAVQ 261
++Y+ + + + L E F P G I S R+ + +S G+ +V Y+ P A++A++
Sbjct: 5 ASLYVGDLHPEVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQPVDAKRALE 64
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGV-NLYVKNLDDSIDDE 320
N + G+ + + +Q+ R GV N+++KNL +ID++
Sbjct: 65 TLNFDVIKGRPVRIMWSQRDPSL-----------------RKSGVGNVFIKNLGKTIDNK 107
Query: 321 RLRKEFTPFGTITSAK 336
L F+ FG I S K
Sbjct: 108 ALYNIFSAFGNILSCK 123
>gi|61175237|ref|NP_001012995.1| polyadenylate-binding protein 1-like 2 [Homo sapiens]
gi|109948285|ref|NP_001035971.1| polyadenylate-binding protein 1-like 2 [Homo sapiens]
gi|402910552|ref|XP_003917938.1| PREDICTED: polyadenylate-binding protein 1-like 2 [Papio anubis]
gi|426396426|ref|XP_004064444.1| PREDICTED: polyadenylate-binding protein 1-like 2 [Gorilla gorilla
gorilla]
gi|74755614|sp|Q5JQF8.1|PAP1M_HUMAN RecName: Full=Polyadenylate-binding protein 1-like 2; AltName:
Full=RNA-binding motif protein 32; AltName:
Full=RNA-binding protein 32
gi|119619077|gb|EAW98671.1| hCG1811470 [Homo sapiens]
gi|187951483|gb|AAI36493.1| PABPC1L2A protein [Homo sapiens]
gi|261861056|dbj|BAI47050.1| poly(A) binding protein, cytoplasmic 1-like 2A [synthetic
construct]
gi|355704922|gb|EHH30847.1| RNA-binding protein 32 [Macaca mulatta]
gi|355767263|gb|EHH62597.1| RNA-binding protein 32 [Macaca fascicularis]
gi|380784435|gb|AFE64093.1| polyadenylate-binding protein 1-like 2 [Macaca mulatta]
Length = 200
Score = 194 bits (494), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 95/156 (60%), Positives = 122/156 (78%), Gaps = 3/156 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP +D +RAL+T+NFD +KGRP+RIMWSQRDPSLRKSGVGNVFIKNL K+I
Sbjct: 44 GYAYVNYQQP--VDAKRALETLNFDVIKGRPVRIMWSQRDPSLRKSGVGNVFIKNLGKTI 101
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+Y+ FSAFG+ILSCKVA DE+G KGYGFVHF+ +E+A ++I+ +NGM LN + +F
Sbjct: 102 DNKALYNIFSAFGNILSCKVACDEKG-PKGYGFVHFQKQESAERAIDVMNGMFLNYRKIF 160
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDE 218
VG+F KERE E G A+ T+ +K+F ED ++E
Sbjct: 161 VGRFKSHKEREAERGAWARQSTSADVKDFEEDTDEE 196
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 97/179 (54%), Gaps = 7/179 (3%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + +Y+ FS G ILS ++ +D+ S GY +V+++ A +++
Sbjct: 1 MASLYVGDLHPEVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQPVDAKRAL 60
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
E +N ++ + V I +R+ L + NV+IKN G+ +++ L +F +G
Sbjct: 61 ETLNFDVIKGRPVR----IMWSQRDPSLRKSG--VGNVFIKNLGKTIDNKALYNIFSAFG 114
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQE 287
I S +V ++ +G+GFV ++ E AE+A+ NG ++ + ++VGR + ER E
Sbjct: 115 NILSCKVACDEKGPKGYGFVHFQKQESAERAIDVMNGMFLNYRKIFVGRFKSHKEREAE 173
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 64/136 (47%), Gaps = 20/136 (14%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND--GKSRGFGFVAYESPEFAEKAVQ 261
++Y+ + + + L E F P G I S R+ + +S G+ +V Y+ P A++A++
Sbjct: 2 ASLYVGDLHPEVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQPVDAKRALE 61
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGV-NLYVKNLDDSIDDE 320
N + G+ + + +Q+ R GV N+++KNL +ID++
Sbjct: 62 TLNFDVIKGRPVRIMWSQRDPSL-----------------RKSGVGNVFIKNLGKTIDNK 104
Query: 321 RLRKEFTPFGTITSAK 336
L F+ FG I S K
Sbjct: 105 ALYNIFSAFGNILSCK 120
>gi|348570494|ref|XP_003471032.1| PREDICTED: polyadenylate-binding protein 1-like 2-like [Cavia
porcellus]
Length = 200
Score = 194 bits (493), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 95/156 (60%), Positives = 121/156 (77%), Gaps = 3/156 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP +D +RAL+T+NFD +KGRP+RIMWSQRDPSLRKSGVGNVFIKNL K+I
Sbjct: 44 GYAYVNYQQP--VDAKRALETLNFDVIKGRPVRIMWSQRDPSLRKSGVGNVFIKNLGKTI 101
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+Y+ FSAFG+ILSCKVA DE+G KGYGFVHF+ +E+A ++I+ +NGM LN + +F
Sbjct: 102 DNKALYNIFSAFGNILSCKVACDEKG-PKGYGFVHFQKQESAERAIDAMNGMFLNYRKIF 160
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDE 218
VG+F KERE E G A+ T+ K+F ED ++E
Sbjct: 161 VGRFKSHKEREAERGAWARQSTSADCKDFEEDTDEE 196
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 98/179 (54%), Gaps = 7/179 (3%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + +Y+ FS G ILS ++ +D+ S GY +V+++ A +++
Sbjct: 1 MASLYVGDLHPEVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQPVDAKRAL 60
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
E +N ++ + V I +R+ L + NV+IKN G+ +++ L +F +G
Sbjct: 61 ETLNFDVIKGRPVR----IMWSQRDPSLRKSG--VGNVFIKNLGKTIDNKALYNIFSAFG 114
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQE 287
I S +V ++ +G+GFV ++ E AE+A+ A NG ++ + ++VGR + ER E
Sbjct: 115 NILSCKVACDEKGPKGYGFVHFQKQESAERAIDAMNGMFLNYRKIFVGRFKSHKEREAE 173
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 64/136 (47%), Gaps = 20/136 (14%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND--GKSRGFGFVAYESPEFAEKAVQ 261
++Y+ + + + L E F P G I S R+ + +S G+ +V Y+ P A++A++
Sbjct: 2 ASLYVGDLHPEVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQPVDAKRALE 61
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGV-NLYVKNLDDSIDDE 320
N + G+ + + +Q+ R GV N+++KNL +ID++
Sbjct: 62 TLNFDVIKGRPVRIMWSQRDPSL-----------------RKSGVGNVFIKNLGKTIDNK 104
Query: 321 RLRKEFTPFGTITSAK 336
L F+ FG I S K
Sbjct: 105 ALYNIFSAFGNILSCK 120
>gi|397508069|ref|XP_003824497.1| PREDICTED: polyadenylate-binding protein 1-like 2-like, partial
[Pan paniscus]
Length = 293
Score = 194 bits (492), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 95/156 (60%), Positives = 122/156 (78%), Gaps = 3/156 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP +D +RAL+T+NFD +KGRP+RIMWSQRDPSLRKSGVGNVFIKNL K+I
Sbjct: 137 GYAYVNYQQP--VDAKRALETLNFDVIKGRPVRIMWSQRDPSLRKSGVGNVFIKNLGKTI 194
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+Y+ FSAFG+ILSCKVA DE+G KGYGFVHF+ +E+A ++I+ +NGM LN + +F
Sbjct: 195 DNKALYNIFSAFGNILSCKVACDEKG-PKGYGFVHFQKQESAERAIDVMNGMFLNYRKIF 253
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDE 218
VG+F KERE E G A+ T+ +K+F ED ++E
Sbjct: 254 VGRFKSHKEREAERGAWARQSTSADVKDFEEDTDEE 289
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 97/179 (54%), Gaps = 7/179 (3%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + +Y+ FS G ILS ++ +D+ S GY +V+++ A +++
Sbjct: 94 MASLYVGDLHPEVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQPVDAKRAL 153
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
E +N ++ + V I +R+ L + NV+IKN G+ +++ L +F +G
Sbjct: 154 ETLNFDVIKGRPVR----IMWSQRDPSLRKSG--VGNVFIKNLGKTIDNKALYNIFSAFG 207
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQE 287
I S +V ++ +G+GFV ++ E AE+A+ NG ++ + ++VGR + ER E
Sbjct: 208 NILSCKVACDEKGPKGYGFVHFQKQESAERAIDVMNGMFLNYRKIFVGRFKSHKEREAE 266
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 64/137 (46%), Gaps = 20/137 (14%)
Query: 203 FTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAV 260
++Y+ + + + L E F P G I S R+ + +S G+ +V Y+ P A++A+
Sbjct: 94 MASLYVGDLHPEVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQPVDAKRAL 153
Query: 261 QAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGV-NLYVKNLDDSIDD 319
+ N + G+ + + +Q+ R GV N+++KNL +ID+
Sbjct: 154 ETLNFDVIKGRPVRIMWSQRDPSL-----------------RKSGVGNVFIKNLGKTIDN 196
Query: 320 ERLRKEFTPFGTITSAK 336
+ L F+ FG I S K
Sbjct: 197 KALYNIFSAFGNILSCK 213
>gi|297304162|ref|XP_002806331.1| PREDICTED: polyadenylate-binding protein 1-like 2-like, partial
[Macaca mulatta]
Length = 249
Score = 194 bits (492), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 95/156 (60%), Positives = 122/156 (78%), Gaps = 3/156 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP +D +RAL+T+NFD +KGRP+RIMWSQRDPSLRKSGVGNVFIKNL K+I
Sbjct: 93 GYAYVNYQQP--VDAKRALETLNFDVIKGRPVRIMWSQRDPSLRKSGVGNVFIKNLGKTI 150
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+Y+ FSAFG+ILSCKVA DE+G KGYGFVHF+ +E+A ++I+ +NGM LN + +F
Sbjct: 151 DNKALYNIFSAFGNILSCKVACDEKG-PKGYGFVHFQKQESAERAIDVMNGMFLNYRKIF 209
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDE 218
VG+F KERE E G A+ T+ +K+F ED ++E
Sbjct: 210 VGRFKSHKEREAERGAWARQSTSADVKDFEEDTDEE 245
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 97/179 (54%), Gaps = 7/179 (3%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + +Y+ FS G ILS ++ +D+ S GY +V+++ A +++
Sbjct: 50 MASLYVGDLHPEVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQPVDAKRAL 109
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
E +N ++ + V I +R+ L + NV+IKN G+ +++ L +F +G
Sbjct: 110 ETLNFDVIKGRPVR----IMWSQRDPSLRKSG--VGNVFIKNLGKTIDNKALYNIFSAFG 163
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQE 287
I S +V ++ +G+GFV ++ E AE+A+ NG ++ + ++VGR + ER E
Sbjct: 164 NILSCKVACDEKGPKGYGFVHFQKQESAERAIDVMNGMFLNYRKIFVGRFKSHKEREAE 222
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 64/137 (46%), Gaps = 20/137 (14%)
Query: 203 FTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAV 260
++Y+ + + + L E F P G I S R+ + +S G+ +V Y+ P A++A+
Sbjct: 50 MASLYVGDLHPEVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQPVDAKRAL 109
Query: 261 QAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGV-NLYVKNLDDSIDD 319
+ N + G+ + + +Q+ R GV N+++KNL +ID+
Sbjct: 110 ETLNFDVIKGRPVRIMWSQRDPSL-----------------RKSGVGNVFIKNLGKTIDN 152
Query: 320 ERLRKEFTPFGTITSAK 336
+ L F+ FG I S K
Sbjct: 153 KALYNIFSAFGNILSCK 169
>gi|444516866|gb|ELV11302.1| Polyadenylate-binding protein 1-like 2 [Tupaia chinensis]
Length = 200
Score = 194 bits (492), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 94/156 (60%), Positives = 122/156 (78%), Gaps = 3/156 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP +D +RAL+T+NFD +KGRP+RIMWSQRDPSLRKSGVGNVFIKNL K+I
Sbjct: 44 GYAYVNYQQP--VDAKRALETLNFDVIKGRPVRIMWSQRDPSLRKSGVGNVFIKNLGKTI 101
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+Y+ FSAFG+ILSCKVA DE+G KGYGFVHF+ +E+A ++I+ +NGM LN + +F
Sbjct: 102 DNKALYNIFSAFGNILSCKVACDEKG-PKGYGFVHFQKQESAERAIDAMNGMFLNYRKIF 160
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDE 218
VG+F KERE E G A+ T+ +K+F +D ++E
Sbjct: 161 VGRFKSHKEREAERGAWARQSTSADVKDFEDDTDEE 196
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 98/179 (54%), Gaps = 7/179 (3%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + +Y+ FS G ILS ++ +D+ S GY +V+++ A +++
Sbjct: 1 MASLYVGDLHPEVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQPVDAKRAL 60
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
E +N ++ + V I +R+ L + NV+IKN G+ +++ L +F +G
Sbjct: 61 ETLNFDVIKGRPVR----IMWSQRDPSLRKSG--VGNVFIKNLGKTIDNKALYNIFSAFG 114
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQE 287
I S +V ++ +G+GFV ++ E AE+A+ A NG ++ + ++VGR + ER E
Sbjct: 115 NILSCKVACDEKGPKGYGFVHFQKQESAERAIDAMNGMFLNYRKIFVGRFKSHKEREAE 173
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 64/136 (47%), Gaps = 20/136 (14%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND--GKSRGFGFVAYESPEFAEKAVQ 261
++Y+ + + + L E F P G I S R+ + +S G+ +V Y+ P A++A++
Sbjct: 2 ASLYVGDLHPEVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQPVDAKRALE 61
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGV-NLYVKNLDDSIDDE 320
N + G+ + + +Q+ R GV N+++KNL +ID++
Sbjct: 62 TLNFDVIKGRPVRIMWSQRDPSL-----------------RKSGVGNVFIKNLGKTIDNK 104
Query: 321 RLRKEFTPFGTITSAK 336
L F+ FG I S K
Sbjct: 105 ALYNIFSAFGNILSCK 120
>gi|27469824|gb|AAH41956.1| PABPC1L2B protein [Homo sapiens]
Length = 243
Score = 194 bits (492), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 95/156 (60%), Positives = 122/156 (78%), Gaps = 3/156 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP +D +RAL+T+NFD +KGRP+RIMWSQRDPSLRKSGVGNVFIKNL K+I
Sbjct: 87 GYAYVNYQQP--VDAKRALETLNFDVIKGRPVRIMWSQRDPSLRKSGVGNVFIKNLGKTI 144
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+Y+ FSAFG+ILSCKVA DE+G KGYGFVHF+ +E+A ++I+ +NGM LN + +F
Sbjct: 145 DNKALYNIFSAFGNILSCKVACDEKG-PKGYGFVHFQKQESAERAIDVMNGMFLNYRKIF 203
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDE 218
VG+F KERE E G A+ T+ +K+F ED ++E
Sbjct: 204 VGRFKSHKEREAERGAWARQSTSADVKDFEEDTDEE 239
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 96/179 (53%), Gaps = 7/179 (3%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + +Y+ FS G ILS + +D+ S GY +V+++ A +++
Sbjct: 44 MASLYVGDLHPEVTEAMLYEKFSPAGPILSISICRDKITRRSLGYAYVNYQQPVDAKRAL 103
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
E +N ++ + V I +R+ L + NV+IKN G+ +++ L +F +G
Sbjct: 104 ETLNFDVIKGRPVR----IMWSQRDPSLRKSG--VGNVFIKNLGKTIDNKALYNIFSAFG 157
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQE 287
I S +V ++ +G+GFV ++ E AE+A+ NG ++ + ++VGR + ER E
Sbjct: 158 NILSCKVACDEKGPKGYGFVHFQKQESAERAIDVMNGMFLNYRKIFVGRFKSHKEREAE 216
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 63/136 (46%), Gaps = 20/136 (14%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQ 261
++Y+ + + + L E F P G I S + + +S G+ +V Y+ P A++A++
Sbjct: 45 ASLYVGDLHPEVTEAMLYEKFSPAGPILSISICRDKITRRSLGYAYVNYQQPVDAKRALE 104
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGV-NLYVKNLDDSIDDE 320
N + G+ + + +Q+ R GV N+++KNL +ID++
Sbjct: 105 TLNFDVIKGRPVRIMWSQRDPSL-----------------RKSGVGNVFIKNLGKTIDNK 147
Query: 321 RLRKEFTPFGTITSAK 336
L F+ FG I S K
Sbjct: 148 ALYNIFSAFGNILSCK 163
>gi|111226286|ref|XP_001134510.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
gi|122096694|sp|Q1ZXC2.1|PAP1B_DICDI RecName: Full=Polyadenylate-binding protein 1-B; Short=PABP-1-B;
Short=Poly(A)-binding protein, cytoplasmic 1-B
gi|90970453|gb|EAS66827.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
Length = 814
Score = 193 bits (491), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 128/358 (35%), Positives = 196/358 (54%), Gaps = 54/358 (15%)
Query: 7 VQLSEEGIIIPKHNVATR---ELSAKVVEGVSRSLSSLIDGNTVKYDWDSGYTCHQLGSG 63
+ +S G P H + + +L+A V E + L S + N + + H
Sbjct: 169 LSMSPIGAYQPPHQLTSLYVGDLAADVNEIILNELFSKVGRNAIA-------SIHVCRDS 221
Query: 64 AILVQLGQPYM-----LDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNL 118
L LG Y+ D ERALDT+N+ + G+P RIMWS RDP+ RK+ VGN+F+KNL
Sbjct: 222 NTLRSLGYAYVNFFNNHDAERALDTLNYTLVHGKPCRIMWSYRDPTKRKTNVGNIFVKNL 281
Query: 119 DKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNS 178
+K +DN +YDTFS+FG+ILSCKV + E+G SKGYG+VHFET ++A K+IEKVNG L+
Sbjct: 282 EKGVDNAMLYDTFSSFGNILSCKV-EFEKGISKGYGYVHFETNDSAEKAIEKVNGTLILG 340
Query: 179 KIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKL-KEMFEPYGTITSYRVMN 237
K + V +F+ + ER K+ V+ +N E E L +E+ +G I S + N
Sbjct: 341 KPINVERFVSKVER-------YKVENKVFFRNADESITIEILQQELSNRFGEIESCILKN 393
Query: 238 N-DGKSRGFGFVAYESPEFAEKAVQ----------------AWNGK--EVDGKILYVGRA 278
+ +GKS+G G V +++ E A+K + + NG E++GK + + R
Sbjct: 394 DANGKSKGLGLVEFKNQEDAQKILTESGALIISTIDGTTTVSSNGGTIEINGKPITIDRI 453
Query: 279 QKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ K ER E +++ L +L++ N+D+SID + +++EF GTI K
Sbjct: 454 KSKVERFTEYRKKTTDL-----------SLFINNIDESIDRDLIKEEFAKHGTIIGIK 500
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 111/225 (49%), Gaps = 26/225 (11%)
Query: 78 ERALDTMNFDALKGRPIRIMWSQRDPS-LRKSGVGN-VFIKNLDKSIDNKAMYDTFSA-F 134
E+A++ +N + G+PI + +R S + + V N VF +N D+SI + + S F
Sbjct: 327 EKAIEKVNGTLILGKPINV---ERFVSKVERYKVENKVFFRNADESITIEILQQELSNRF 383
Query: 135 GSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLL------------------ 176
G I SC + D G SKG G V F+ +E A K + + +++
Sbjct: 384 GEIESCILKNDANGKSKGLGLVEFKNQEDAQKILTESGALIISTIDGTTTVSSNGGTIEI 443
Query: 177 NSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM 236
N K + + + + ER E +K + ++I N E + + +KE F +GTI +++
Sbjct: 444 NGKPITIDRIKSKVERFTEYRKKTTDLS-LFINNIDESIDRDLIKEEFAKHGTIIGIKIV 502
Query: 237 NN-DGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
+ + +++GFGF+++ + A+KA+ + NG K + V + K
Sbjct: 503 QDENARNKGFGFISFSEIQEAQKALDSLNGFTFGSKQIQVSFSNK 547
>gi|399950033|gb|AFP65689.1| polyadenylate-binding protein [Chroomonas mesostigmatica CCMP1168]
Length = 490
Score = 193 bits (490), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 102/259 (39%), Positives = 160/259 (61%), Gaps = 5/259 (1%)
Query: 76 DTERALDTMNF---DALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFS 132
D ++A +N+ + L +P+RIMW Q+D SLR SG GN+FIKN+ + DNK++ FS
Sbjct: 88 DAQKAFKLLNYYTDETLHYKPLRIMWVQKDKSLRFSGTGNLFIKNIPRRYDNKSLSKLFS 147
Query: 133 AFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKER 192
FG ILSCK+A DE S GYGFVH++ E+ + K+IEK+N ++ + +FVG FI + +R
Sbjct: 148 QFGKILSCKIALDENKRSMGYGFVHYKEEKDSKKAIEKMNNCFIDGEKIFVGPFISKVKR 207
Query: 193 EKELGEKAKLFTNVYIKN-FGEDFNDEKLKEMFEPYGTITSYRVMNNDGKSRGFGFVAYE 251
K + FTNVYIKN ++ N+ +K++FE +G ITS + + GF FV +E
Sbjct: 208 NNRNNSKLR-FTNVYIKNILFQNCNEIYIKDLFEIFGPITSIFIPKANEAPLGFAFVNFE 266
Query: 252 SPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVK 311
+PE AE A+ NGK++ GK LYVG+A+ + ER + L ++F K+ ++ Y+ + ++
Sbjct: 267 NPEDAEDAIFKMNGKKIKGKTLYVGKAETRIERQRRLAKKFLDKKMSKVCFYKKLMFFIS 326
Query: 312 NLDDSIDDERLRKEFTPFG 330
++ I + L + G
Sbjct: 327 DVPIFIKSKILTSAYLKIG 345
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 116/228 (50%), Gaps = 21/228 (9%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQD-EQGNSKGYGFVHFETEEAANKSIEK 170
++++ +L ++ ++ FS G + S ++ +D G S+GY +V+F + A K+ +
Sbjct: 36 SLYVGDLSIYVEESSLMKIFSKIGKVHSIQICRDFSTGISRGYSYVNFLNPKDAQKAFKL 95
Query: 171 VNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTI 230
+N + + + I +++K L N++IKN ++++ L ++F +G I
Sbjct: 96 LN-YYTDETLHYKPLRIMWVQKDKSLRFSGT--GNLFIKNIPRRYDNKSLSKLFSQFGKI 152
Query: 231 TSYRV-MNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQE-- 287
S ++ ++ + +S G+GFV Y+ + ++KA++ N +DG+ ++VG K +R
Sbjct: 153 LSCKIALDENKRSMGYGFVHYKEEKDSKKAIEKMNNCFIDGEKIFVGPFISKVKRNNRNN 212
Query: 288 LKRRFEMLKIERLNRYQGVNLYVKN-LDDSIDDERLRKEFTPFGTITS 334
K RF N+Y+KN L + ++ ++ F FG ITS
Sbjct: 213 SKLRF-------------TNVYIKNILFQNCNEIYIKDLFEIFGPITS 247
Score = 39.7 bits (91), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 64/139 (46%), Gaps = 23/139 (16%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQ 261
++Y+ + + L ++F G + S ++ + G SRG+ +V + +P+ A+KA +
Sbjct: 35 CSLYVGDLSIYVEESSLMKIFSKIGKVHSIQICRDFSTGISRGYSYVNFLNPKDAQKAFK 94
Query: 262 AWN---GKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGV-NLYVKNLDDSI 317
N + + K L + QK ++ R+ G NL++KN+
Sbjct: 95 LLNYYTDETLHYKPLRIMWVQK-----------------DKSLRFSGTGNLFIKNIPRRY 137
Query: 318 DDERLRKEFTPFGTITSAK 336
D++ L K F+ FG I S K
Sbjct: 138 DNKSLSKLFSQFGKILSCK 156
>gi|431844457|gb|ELK01429.1| Polyadenylate-binding protein 1-like 2 [Pteropus alecto]
Length = 200
Score = 192 bits (487), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 95/155 (61%), Positives = 119/155 (76%), Gaps = 3/155 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP +D +RAL+T+NFD +KGRP+RIMWSQRDPSLRKSGVGNVFIKNL KSI
Sbjct: 44 GYAYVNYQQP--MDAKRALETLNFDVIKGRPVRIMWSQRDPSLRKSGVGNVFIKNLGKSI 101
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+Y+ FSAFG+ILSCKVA DE+G KGYGFVHF+ +E+A ++I +NGM LN + +F
Sbjct: 102 DNKALYNIFSAFGNILSCKVACDEKG-PKGYGFVHFQKQESAERAINAMNGMFLNYRKIF 160
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFND 217
VG+F KERE E G A+ T+ +K F E+ +D
Sbjct: 161 VGRFKSHKEREAERGAWARQSTSGDVKGFQENSDD 195
Score = 84.0 bits (206), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 98/179 (54%), Gaps = 7/179 (3%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + +Y+ FS G ILS ++ +D+ S GY +V+++ A +++
Sbjct: 1 MASLYVGDLHPEVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQPMDAKRAL 60
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
E +N ++ + V I +R+ L + NV+IKN G+ +++ L +F +G
Sbjct: 61 ETLNFDVIKGRPVR----IMWSQRDPSLRKSG--VGNVFIKNLGKSIDNKALYNIFSAFG 114
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQE 287
I S +V ++ +G+GFV ++ E AE+A+ A NG ++ + ++VGR + ER E
Sbjct: 115 NILSCKVACDEKGPKGYGFVHFQKQESAERAINAMNGMFLNYRKIFVGRFKSHKEREAE 173
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 64/136 (47%), Gaps = 20/136 (14%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND--GKSRGFGFVAYESPEFAEKAVQ 261
++Y+ + + + L E F P G I S R+ + +S G+ +V Y+ P A++A++
Sbjct: 2 ASLYVGDLHPEVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQPMDAKRALE 61
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGV-NLYVKNLDDSIDDE 320
N + G+ + + +Q+ R GV N+++KNL SID++
Sbjct: 62 TLNFDVIKGRPVRIMWSQRDPSL-----------------RKSGVGNVFIKNLGKSIDNK 104
Query: 321 RLRKEFTPFGTITSAK 336
L F+ FG I S K
Sbjct: 105 ALYNIFSAFGNILSCK 120
>gi|1262583|dbj|BAA02244.1| polyadenylate binding protein II [Homo sapiens]
Length = 193
Score = 191 bits (486), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 92/135 (68%), Positives = 113/135 (83%), Gaps = 1/135 (0%)
Query: 203 FTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGKSRGFGFVAYESPEFAEKAVQ 261
FTNVYIKNFGE+ +DE LKE+F +G S +VM + +GKS+GFGFV+YE E A KAV+
Sbjct: 1 FTNVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVE 60
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDER 321
NGKE+ GKI++VGRAQKK ER ELKR+FE LK ER++RYQGVNLY+KNLDD+IDDE+
Sbjct: 61 EMNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEK 120
Query: 322 LRKEFTPFGTITSAK 336
LRKEF+PFG+ITSAK
Sbjct: 121 LRKEFSPFGSITSAK 135
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 85/187 (45%), Positives = 120/187 (64%), Gaps = 10/187 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV+IKN + +D++++ + FS FG LS KV +D G SKG+GFV +E E ANK++E++
Sbjct: 3 NVYIKNFGEEVDDESLKELFSQFGKTLSVKVMRDPNGKSKGFGFVSYEKHEDANKAVEEM 62
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKLK 221
NG ++ KI+FVG+ + ER+ EL K + N+YIKN + +DEKL+
Sbjct: 63 NGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLR 122
Query: 222 EMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKK 281
+ F P+G+ITS +VM DG+S+GFGFV + SPE A KAV NG+ V K LYV AQ+K
Sbjct: 123 KEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRK 182
Query: 282 AERTQEL 288
ER L
Sbjct: 183 EERKAHL 189
>gi|339899318|ref|XP_001469326.2| putative polyadenylate-binding protein 1 [Leishmania infantum
JPCM5]
gi|398023903|ref|XP_003865113.1| polyadenylate-binding protein 1, putative [Leishmania donovani]
gi|321398770|emb|CAM72432.2| putative polyadenylate-binding protein 1 [Leishmania infantum
JPCM5]
gi|322503349|emb|CBZ38434.1| polyadenylate-binding protein 1, putative [Leishmania donovani]
Length = 560
Score = 191 bits (484), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 109/269 (40%), Positives = 160/269 (59%), Gaps = 19/269 (7%)
Query: 77 TERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGS 136
E+A+++MNF + + +R+MW QRDP+LR SG GNVF+KNL+K +D+K+++D F+ FGS
Sbjct: 79 AEKAIESMNFKRVGDKCVRLMWQQRDPALRYSGNGNVFVKNLEKDVDSKSLHDIFTKFGS 138
Query: 137 ILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNS----KIVFVGKFIPRKER 192
ILSCKV QDE+G S+GYGFVHF+ E +A +I K+NG ++ K ++V FI R R
Sbjct: 139 ILSCKVMQDEEGKSRGYGFVHFKDETSAKDAIVKMNGAADHASEDKKALYVANFIRRNAR 198
Query: 193 EKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDGKSRGFGFVAYES 252
L FTNVYIK N E +++ F +G ITS D R F F +E
Sbjct: 199 ---LAALVANFTNVYIKQVLPTVNKEVIEKFFAKFGGITSAAAC-KDKSGRVFAFCNFEK 254
Query: 253 PEFAEKAVQAWNGKEVD-----GKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVN 307
+ A KAV+A + +D G+ LYV RAQ ++ER L++++ ++ + L G N
Sbjct: 255 HDDAVKAVEAMHDHHIDGITAPGEKLYVQRAQPRSERLIALRQKY--MQHQSL----GNN 308
Query: 308 LYVKNLDDSIDDERLRKEFTPFGTITSAK 336
LYV+N D L + F +G + S +
Sbjct: 309 LYVRNFDPEFTGADLLELFKEYGEVKSCR 337
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 108/192 (56%), Gaps = 12/192 (6%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIE-- 169
NV+IK + +++ + + F+ FG I S +D+ G + + F +FE + A K++E
Sbjct: 208 NVYIKQVLPTVNKEVIEKFFAKFGGITSAAACKDKSG--RVFAFCNFEKHDDAVKAVEAM 265
Query: 170 ---KVNGMLLNSKIVFVGKFIPRKEREKELGEK----AKLFTNVYIKNFGEDFNDEKLKE 222
++G+ + ++V + PR ER L +K L N+Y++NF +F L E
Sbjct: 266 HDHHIDGITAPGEKLYVQRAQPRSERLIALRQKYMQHQSLGNNLYVRNFDPEFTGADLLE 325
Query: 223 MFEPYGTITSYRVM-NNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKK 281
+F+ YG + S RVM + G SRGFGFV++ + + A A++ NG+ ++GK L V AQ++
Sbjct: 326 LFKEYGEVKSCRVMVSESGASRGFGFVSFSNADEANAALREMNGRMLNGKPLIVNIAQRR 385
Query: 282 AERTQELKRRFE 293
+R L+ +F+
Sbjct: 386 DQRYTMLRLQFQ 397
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 121/232 (52%), Gaps = 25/232 (10%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
+ ++++ +LD +I+ + + F FG+IL+ +V +D S GYG+V+F+ ++A K+I
Sbjct: 24 IASIYVGDLDAAINEPQLVELFKPFGTILNVRVCRDIITQRSLGYGYVNFDNHDSAEKAI 83
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
E +N + K V + ++R+ L NV++KN +D + + L ++F +G
Sbjct: 84 ESMNFKRVGDKCVRLM----WQQRDPALRYSGN--GNVFVKNLEKDVDSKSLHDIFTKFG 137
Query: 229 TITSYRVMNN-DGKSRGFGFVAYESPEFAEKAVQAWNG----KEVDGKILYVGRAQKKAE 283
+I S +VM + +GKSRG+GFV ++ A+ A+ NG D K LYV ++
Sbjct: 138 SILSCKVMQDEEGKSRGYGFVHFKDETSAKDAIVKMNGAADHASEDKKALYVANFIRRNA 197
Query: 284 RTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSA 335
R L F N+Y+K + +++ E + K F FG ITSA
Sbjct: 198 RLAALVANF-------------TNVYIKQVLPTVNKEVIEKFFAKFGGITSA 236
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 73/142 (51%), Gaps = 20/142 (14%)
Query: 198 EKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEF 255
+K ++Y+ + N+ +L E+F+P+GTI + RV + +S G+G+V +++ +
Sbjct: 19 DKPMQIASIYVGDLDAAINEPQLVELFKPFGTILNVRVCRDIITQRSLGYGYVNFDNHDS 78
Query: 256 AEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGV-NLYVKNLD 314
AEKA+++ N K V K + + Q+ RY G N++VKNL+
Sbjct: 79 AEKAIESMNFKRVGDKCVRLMWQQRDPAL-----------------RYSGNGNVFVKNLE 121
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
+D + L FT FG+I S K
Sbjct: 122 KDVDSKSLHDIFTKFGSILSCK 143
>gi|389603137|ref|XP_001568596.2| putative polyadenylate-binding protein 1 [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|322505742|emb|CAM43715.2| putative polyadenylate-binding protein 1 [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 554
Score = 190 bits (483), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 110/269 (40%), Positives = 159/269 (59%), Gaps = 19/269 (7%)
Query: 77 TERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGS 136
ERA+++MNF + + +R+MW QRDPSLR SG GNVF+KNL+K +D+K+++D F+ FGS
Sbjct: 79 AERAIESMNFRRVGDKCVRLMWQQRDPSLRYSGNGNVFVKNLEKDVDSKSLHDIFTKFGS 138
Query: 137 ILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNS----KIVFVGKFIPRKER 192
ILSCKV +DE+G S+GYGFVHF+ E +A +I K+NG ++ K ++V FI R R
Sbjct: 139 ILSCKVMEDEEGKSRGYGFVHFKDEISAKDAIVKMNGAADHASEDKKALYVANFIRRNAR 198
Query: 193 EKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDGKSRGFGFVAYES 252
L FTNVYIK N E ++ F +G ITS D R F F +E
Sbjct: 199 ---LAALVANFTNVYIKQVLPTVNKEVIENFFAKFGGITSAAAC-KDKSGRVFAFCNFEK 254
Query: 253 PEFAEKAVQAWNGKEVD-----GKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVN 307
+ A KAV+A + +D G+ LYV RAQ ++ER L++++ ++ + L G N
Sbjct: 255 HDDAVKAVEAMHDHHIDGITAPGEKLYVQRAQPRSERLIALRQKY--MQHQSL----GNN 308
Query: 308 LYVKNLDDSIDDERLRKEFTPFGTITSAK 336
LYV+N D L + F +G + S +
Sbjct: 309 LYVRNFDPEFTGADLLELFKEYGDVKSCR 337
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 110/192 (57%), Gaps = 12/192 (6%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIE-- 169
NV+IK + +++ + + + F+ FG I S +D+ G + + F +FE + A K++E
Sbjct: 208 NVYIKQVLPTVNKEVIENFFAKFGGITSAAACKDKSG--RVFAFCNFEKHDDAVKAVEAM 265
Query: 170 ---KVNGMLLNSKIVFVGKFIPRKEREKELGEK----AKLFTNVYIKNFGEDFNDEKLKE 222
++G+ + ++V + PR ER L +K L N+Y++NF +F L E
Sbjct: 266 HDHHIDGITAPGEKLYVQRAQPRSERLIALRQKYMQHQSLGNNLYVRNFDPEFTGADLLE 325
Query: 223 MFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKK 281
+F+ YG + S RVM ++ G SRGFGFV++ + + A A++ NG+ ++GK L V AQ++
Sbjct: 326 LFKEYGDVKSCRVMMSESGASRGFGFVSFSNADEANAALREMNGRMLNGKPLIVNIAQRR 385
Query: 282 AERTQELKRRFE 293
+R L+ +F+
Sbjct: 386 DQRYTMLRLQFQ 397
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 119/232 (51%), Gaps = 25/232 (10%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQD-EQGNSKGYGFVHFETEEAANKSI 168
+ ++++ +LD +I+ + + F FG+IL+ +V +D S GYG+V+F+ +A ++I
Sbjct: 24 IASIYVGDLDAAINEPQLVELFKPFGTILNVRVCRDIITQRSLGYGYVNFDNHHSAERAI 83
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
E +N + K V + ++R+ L NV++KN +D + + L ++F +G
Sbjct: 84 ESMNFRRVGDKCVRLM----WQQRDPSLRYSGN--GNVFVKNLEKDVDSKSLHDIFTKFG 137
Query: 229 TITSYRVM-NNDGKSRGFGFVAYESPEFAEKAVQAWNG----KEVDGKILYVGRAQKKAE 283
+I S +VM + +GKSRG+GFV ++ A+ A+ NG D K LYV ++
Sbjct: 138 SILSCKVMEDEEGKSRGYGFVHFKDEISAKDAIVKMNGAADHASEDKKALYVANFIRRNA 197
Query: 284 RTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSA 335
R L F N+Y+K + +++ E + F FG ITSA
Sbjct: 198 RLAALVANF-------------TNVYIKQVLPTVNKEVIENFFAKFGGITSA 236
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 71/141 (50%), Gaps = 20/141 (14%)
Query: 199 KAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFA 256
K ++Y+ + N+ +L E+F+P+GTI + RV + +S G+G+V +++ A
Sbjct: 20 KPMQIASIYVGDLDAAINEPQLVELFKPFGTILNVRVCRDIITQRSLGYGYVNFDNHHSA 79
Query: 257 EKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGV-NLYVKNLDD 315
E+A+++ N + V K + + Q+ RY G N++VKNL+
Sbjct: 80 ERAIESMNFRRVGDKCVRLMWQQRDPSL-----------------RYSGNGNVFVKNLEK 122
Query: 316 SIDDERLRKEFTPFGTITSAK 336
+D + L FT FG+I S K
Sbjct: 123 DVDSKSLHDIFTKFGSILSCK 143
>gi|328876647|gb|EGG25010.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
fasciculatum]
Length = 748
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 111/312 (35%), Positives = 170/312 (54%), Gaps = 36/312 (11%)
Query: 56 TCHQLGSGAILVQLGQPYM-----LDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGV 110
+ H A L LG Y+ +D ERALDT+N+ + GRP RIMWS RDP+ RKS V
Sbjct: 160 SIHVCRDSATLRSLGYAYVNFYNSVDAERALDTLNYSLILGRPCRIMWSHRDPTKRKSNV 219
Query: 111 GNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEK 170
GN+F+KNL+K++DN ++DTFS +G+ILSCK+ + E+G SKGYG+VHFE +E++ ++I K
Sbjct: 220 GNIFVKNLEKNVDNALLFDTFSTYGNILSCKI-EYEKGISKGYGYVHFENQESSEQAILK 278
Query: 171 VNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTI 230
VNG +L K + V F+ + ER KE + KLF IKN E+ E L++ +G I
Sbjct: 279 VNGTILLGKPIIVEPFVSKVERFKEKKNENKLF----IKNIDENVTSEMLQQELSRFGEI 334
Query: 231 TSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELK 289
S + + GK +G FV +++ E A+ +++ + K + R + K ER+ E
Sbjct: 335 ESCNIRTDPTGKPKGLAFVEFKTSEDAQALLESTEAITILSKQITFDRIKNKVERSIEKN 394
Query: 290 RRF--EMLKIERL-----------------------NRYQGVNLYVKNLDDSIDDERLRK 324
++ E+ + Q + L++ N+D +D E +R+
Sbjct: 395 QKLINELNNNNNNHNNNNINHHINSSSLQQNGSTSQQQQQNLTLFINNIDMEVDKEIIRE 454
Query: 325 EFTPFGTITSAK 336
EF G I K
Sbjct: 455 EFAKHGNILGIK 466
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 104/245 (42%), Gaps = 42/245 (17%)
Query: 77 TERALDTMNFDALKGRPIRI--MWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAF 134
+E+A+ +N L G+PI + S+ + K +FIKN+D+++ ++ + S F
Sbjct: 272 SEQAILKVNGTILLGKPIIVEPFVSKVERFKEKKNENKLFIKNIDENVTSEMLQQELSRF 331
Query: 135 GSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREK 194
G I SC + D G KG FV F+T E A +E + + SK + + + ER
Sbjct: 332 GEIESCNIRTDPTGKPKGLAFVEFKTSEDAQALLESTEAITILSKQITFDRIKNKVERSI 391
Query: 195 ELGEK-----------------------AKLFTN------------VYIKNFGEDFNDEK 219
E +K + L N ++I N + + E
Sbjct: 392 EKNQKLINELNNNNNNHNNNNINHHINSSSLQQNGSTSQQQQQNLTLFINNIDMEVDKEI 451
Query: 220 LKEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQ 279
++E F +G I ++ KSRGF F+ Y + E A A++ NG K L V +
Sbjct: 452 IREEFAKHGNILGIKI-----KSRGFAFLTYSTQEEAAVAIEKMNGYVFGTKALVVSLSN 506
Query: 280 KKAER 284
+ E+
Sbjct: 507 SRKEK 511
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 63/139 (45%), Gaps = 22/139 (15%)
Query: 203 FTNVYIKNFGEDFNDEKLKEMFEPYG--TITSYRVMNNDG--KSRGFGFVAYESPEFAEK 258
FT++Y+ + ++ N+ L E+F G + S V + +S G+ +V + + AE+
Sbjct: 129 FTSLYVGDLSQEVNELILAELFSKVGRTAVASIHVCRDSATLRSLGYAYVNFYNSVDAER 188
Query: 259 AVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGV-NLYVKNLDDSI 317
A+ N + G+ + + + + R V N++VKNL+ ++
Sbjct: 189 ALDTLNYSLILGRPCRIMWSHRDPTK-----------------RKSNVGNIFVKNLEKNV 231
Query: 318 DDERLRKEFTPFGTITSAK 336
D+ L F+ +G I S K
Sbjct: 232 DNALLFDTFSTYGNILSCK 250
>gi|351699464|gb|EHB02383.1| Polyadenylate-binding protein 1-like 2 [Heterocephalus glaber]
Length = 200
Score = 189 bits (481), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 93/156 (59%), Positives = 118/156 (75%), Gaps = 3/156 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP +D +RAL+T+NFD +KGRP+RIMWSQRDPSLRKSGVGNVFIKNL K+I
Sbjct: 44 GYAYVNYQQP--VDAKRALETLNFDVIKGRPVRIMWSQRDPSLRKSGVGNVFIKNLGKTI 101
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+Y+ FS FG+ILSCKVA DE+G KGYGFVHF+ +E+A ++I+ +NGM LN + +F
Sbjct: 102 DNKALYNIFSTFGNILSCKVACDEKG-PKGYGFVHFQKQESAERAIDAMNGMFLNYRKIF 160
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDE 218
VG+F KERE E G A+ T K F +D ++E
Sbjct: 161 VGRFKSHKEREAERGAWARQSTGADCKGFEDDTDEE 196
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 98/179 (54%), Gaps = 7/179 (3%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + +Y+ FS G ILS ++ +D+ S GY +V+++ A +++
Sbjct: 1 MASLYVGDLHPEVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQPVDAKRAL 60
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
E +N ++ + V I +R+ L + NV+IKN G+ +++ L +F +G
Sbjct: 61 ETLNFDVIKGRPVR----IMWSQRDPSLRKSG--VGNVFIKNLGKTIDNKALYNIFSTFG 114
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQE 287
I S +V ++ +G+GFV ++ E AE+A+ A NG ++ + ++VGR + ER E
Sbjct: 115 NILSCKVACDEKGPKGYGFVHFQKQESAERAIDAMNGMFLNYRKIFVGRFKSHKEREAE 173
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 64/136 (47%), Gaps = 20/136 (14%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND--GKSRGFGFVAYESPEFAEKAVQ 261
++Y+ + + + L E F P G I S R+ + +S G+ +V Y+ P A++A++
Sbjct: 2 ASLYVGDLHPEVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQPVDAKRALE 61
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGV-NLYVKNLDDSIDDE 320
N + G+ + + +Q+ R GV N+++KNL +ID++
Sbjct: 62 TLNFDVIKGRPVRIMWSQRDPSL-----------------RKSGVGNVFIKNLGKTIDNK 104
Query: 321 RLRKEFTPFGTITSAK 336
L F+ FG I S K
Sbjct: 105 ALYNIFSTFGNILSCK 120
>gi|389595349|ref|XP_003722897.1| polyadenylate-binding protein 1 [Leishmania major strain Friedlin]
gi|323364125|emb|CBZ13132.1| polyadenylate-binding protein 1 [Leishmania major strain Friedlin]
Length = 560
Score = 189 bits (480), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 107/269 (39%), Positives = 158/269 (58%), Gaps = 19/269 (7%)
Query: 77 TERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGS 136
E+A+++MNF + + +R+MW QRDP+LR SG GNVF+KNL+K +D+K+++D F+ FGS
Sbjct: 79 AEKAIESMNFKRVGDKCVRLMWQQRDPALRYSGNGNVFVKNLEKDVDSKSLHDIFTKFGS 138
Query: 137 ILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNS----KIVFVGKFIPRKER 192
ILSCKV QDE+G S+GYGFVHF+ E +A +I K+NG ++ K ++V FI R R
Sbjct: 139 ILSCKVMQDEEGKSRGYGFVHFKDETSAKDAIVKMNGAADHASEDKKALYVANFIRRNAR 198
Query: 193 EKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDGKSRGFGFVAYES 252
L FTNVYIK N + +++ F +G ITS D R F F +E
Sbjct: 199 ---LAALVANFTNVYIKQVLPTVNKDVIEKFFAKFGGITSAAAC-KDKSGRVFAFCNFEK 254
Query: 253 PEFAEKAVQAWNGKEVD-----GKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVN 307
+ A KAV+A + +D G+ LYV RAQ ++ER L++++ ++ G N
Sbjct: 255 HDDAVKAVEAMHDHHIDGITAPGEKLYVQRAQPRSERLIALRQKYMQ------HQALGNN 308
Query: 308 LYVKNLDDSIDDERLRKEFTPFGTITSAK 336
LYV+N D L + F +G + S +
Sbjct: 309 LYVRNFDPEFTGADLLELFKEYGEVKSCR 337
Score = 100 bits (249), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 107/192 (55%), Gaps = 12/192 (6%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIE-- 169
NV+IK + +++ + F+ FG I S +D+ G + + F +FE + A K++E
Sbjct: 208 NVYIKQVLPTVNKDVIEKFFAKFGGITSAAACKDKSG--RVFAFCNFEKHDDAVKAVEAM 265
Query: 170 ---KVNGMLLNSKIVFVGKFIPRKEREKELGEK----AKLFTNVYIKNFGEDFNDEKLKE 222
++G+ + ++V + PR ER L +K L N+Y++NF +F L E
Sbjct: 266 HDHHIDGITAPGEKLYVQRAQPRSERLIALRQKYMQHQALGNNLYVRNFDPEFTGADLLE 325
Query: 223 MFEPYGTITSYRVM-NNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKK 281
+F+ YG + S RVM + G SRGFGFV++ + + A A++ NG+ ++GK L V AQ++
Sbjct: 326 LFKEYGEVKSCRVMVSESGVSRGFGFVSFSNADEANAALREMNGRMLNGKPLIVNIAQRR 385
Query: 282 AERTQELKRRFE 293
+R L+ +F+
Sbjct: 386 DQRYTMLRLQFQ 397
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 121/232 (52%), Gaps = 25/232 (10%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
+ ++++ +LD +I+ + + F FG+IL+ +V +D S GYG+V+F+ ++A K+I
Sbjct: 24 IASIYVGDLDATINEPQLVELFKPFGTILNVRVCRDIITQRSLGYGYVNFDNHDSAEKAI 83
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
E +N + K V + ++R+ L NV++KN +D + + L ++F +G
Sbjct: 84 ESMNFKRVGDKCV----RLMWQQRDPALRYSGN--GNVFVKNLEKDVDSKSLHDIFTKFG 137
Query: 229 TITSYRVMNN-DGKSRGFGFVAYESPEFAEKAVQAWNG----KEVDGKILYVGRAQKKAE 283
+I S +VM + +GKSRG+GFV ++ A+ A+ NG D K LYV ++
Sbjct: 138 SILSCKVMQDEEGKSRGYGFVHFKDETSAKDAIVKMNGAADHASEDKKALYVANFIRRNA 197
Query: 284 RTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSA 335
R L F N+Y+K + +++ + + K F FG ITSA
Sbjct: 198 RLAALVANF-------------TNVYIKQVLPTVNKDVIEKFFAKFGGITSA 236
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 73/142 (51%), Gaps = 20/142 (14%)
Query: 198 EKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEF 255
+K ++Y+ + N+ +L E+F+P+GTI + RV + +S G+G+V +++ +
Sbjct: 19 DKPMQIASIYVGDLDATINEPQLVELFKPFGTILNVRVCRDIITQRSLGYGYVNFDNHDS 78
Query: 256 AEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGV-NLYVKNLD 314
AEKA+++ N K V K + + Q+ RY G N++VKNL+
Sbjct: 79 AEKAIESMNFKRVGDKCVRLMWQQRDPAL-----------------RYSGNGNVFVKNLE 121
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
+D + L FT FG+I S K
Sbjct: 122 KDVDSKSLHDIFTKFGSILSCK 143
>gi|6019464|gb|AAC64372.2| polyadenylate-binding protein 1 [Leishmania major]
Length = 560
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 107/269 (39%), Positives = 158/269 (58%), Gaps = 19/269 (7%)
Query: 77 TERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGS 136
E+A+++MNF + + +R+MW QRDP+LR SG GNVF+KNL+K +D+K+++D F+ FGS
Sbjct: 79 AEKAIESMNFKRVGDKCVRLMWQQRDPALRYSGNGNVFVKNLEKDVDSKSLHDIFTKFGS 138
Query: 137 ILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNS----KIVFVGKFIPRKER 192
ILSCKV QDE+G S+GYGFVHF+ E +A +I K+NG ++ K ++V FI R R
Sbjct: 139 ILSCKVMQDEEGKSRGYGFVHFKDETSAKDAIVKMNGAADHASEDKKALYVANFIRRNAR 198
Query: 193 EKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDGKSRGFGFVAYES 252
L FTNVYIK N + +++ F +G ITS D R F F +E
Sbjct: 199 ---LAALVANFTNVYIKQVLPTVNKDVIEKFFAKFGGITSAAAC-KDKSGRVFAFCNFEK 254
Query: 253 PEFAEKAVQAWNGKEVD-----GKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVN 307
+ A KAV+A + +D G+ LYV RAQ ++ER L++++ ++ G N
Sbjct: 255 HDDAVKAVEAMHDHHIDGITAPGEKLYVQRAQPRSERLIALRQKYMQ------HQALGNN 308
Query: 308 LYVKNLDDSIDDERLRKEFTPFGTITSAK 336
LYV+N D L + F +G + S +
Sbjct: 309 LYVRNFDPEFTGADLLELFKEYGEVKSCR 337
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 121/232 (52%), Gaps = 25/232 (10%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
+ ++++ +LD +I+ + + F FG+IL+ +V +D S GYG+V+F+ ++A K+I
Sbjct: 24 IASIYVGDLDATINEPQLVELFKPFGTILNVRVCRDIITQRSLGYGYVNFDNHDSAEKAI 83
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
E +N + K V + ++R+ L NV++KN +D + + L ++F +G
Sbjct: 84 ESMNFKRVGDKCVRLM----WQQRDPALRYSGN--GNVFVKNLEKDVDSKSLHDIFTKFG 137
Query: 229 TITSYRVMNN-DGKSRGFGFVAYESPEFAEKAVQAWNG----KEVDGKILYVGRAQKKAE 283
+I S +VM + +GKSRG+GFV ++ A+ A+ NG D K LYV ++
Sbjct: 138 SILSCKVMQDEEGKSRGYGFVHFKDETSAKDAIVKMNGAADHASEDKKALYVANFIRRNA 197
Query: 284 RTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSA 335
R L F N+Y+K + +++ + + K F FG ITSA
Sbjct: 198 RLAALVANF-------------TNVYIKQVLPTVNKDVIEKFFAKFGGITSA 236
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 107/192 (55%), Gaps = 12/192 (6%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIE-- 169
NV+IK + +++ + F+ FG I S +D+ G + + F +FE + A K++E
Sbjct: 208 NVYIKQVLPTVNKDVIEKFFAKFGGITSAAACKDKSG--RVFAFCNFEKHDDAVKAVEAM 265
Query: 170 ---KVNGMLLNSKIVFVGKFIPRKEREKELGEK----AKLFTNVYIKNFGEDFNDEKLKE 222
++G+ + ++V + PR ER L +K L N+Y++NF +F L E
Sbjct: 266 HDHHIDGITAPGEKLYVQRAQPRSERLIALRQKYMQHQALGNNLYVRNFDPEFTGADLLE 325
Query: 223 MFEPYGTITSYRVM-NNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKK 281
+F+ YG + S RVM + G SRGFGFV++ + + A A++ NG+ ++GK L V AQ++
Sbjct: 326 LFKEYGEVKSCRVMVSESGVSRGFGFVSFSNADEANAALREMNGRMLNGKPLIVNIAQRR 385
Query: 282 AERTQELKRRFE 293
+R ++ +F+
Sbjct: 386 DQRYTIVRLQFQ 397
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 71/136 (52%), Gaps = 20/136 (14%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQ 261
++Y+ + N+ +L E+F+P+GTI + RV + +S G+G+V +++ + AEKA++
Sbjct: 25 ASIYVGDLDATINEPQLVELFKPFGTILNVRVCRDIITQRSLGYGYVNFDNHDSAEKAIE 84
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGV-NLYVKNLDDSIDDE 320
+ N K V K + + Q+ RY G N++VKNL+ +D +
Sbjct: 85 SMNFKRVGDKCVRLMWQQRDPAL-----------------RYSGNGNVFVKNLEKDVDSK 127
Query: 321 RLRKEFTPFGTITSAK 336
L FT FG+I S K
Sbjct: 128 SLHDIFTKFGSILSCK 143
>gi|401430030|ref|XP_003879497.1| putative polyadenylate-binding protein 1 [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322495747|emb|CBZ31053.1| putative polyadenylate-binding protein 1 [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 564
Score = 189 bits (479), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 108/269 (40%), Positives = 160/269 (59%), Gaps = 19/269 (7%)
Query: 77 TERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGS 136
E+A+++MNF + + +R+MW QRDP+LR SG GNVF+KNL+K +D+K+++D F+ FGS
Sbjct: 79 AEKAIESMNFKRVGDKCVRLMWQQRDPALRYSGNGNVFVKNLEKDVDSKSLHDIFTKFGS 138
Query: 137 ILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNS----KIVFVGKFIPRKER 192
ILSCKV QDE+G S+GYGFVHF+ E +A +I K+NG ++ K ++V FI R R
Sbjct: 139 ILSCKVMQDEEGKSRGYGFVHFKDETSAKDAIVKMNGAADHASEDKKALYVANFIRRNAR 198
Query: 193 EKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDGKSRGFGFVAYES 252
L FTNVYIK + E +++ F +G ITS D R F F +E
Sbjct: 199 ---LAALVANFTNVYIKQVLPTVSKEVIEKFFAKFGGITSAAAC-KDKSGRVFAFCNFEK 254
Query: 253 PEFAEKAVQAWNGKEVD-----GKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVN 307
+ A KAV+A + +D G+ LYV RAQ ++ER L++++ ++ + L G N
Sbjct: 255 HDDAVKAVEAMHDHHIDGITAPGEKLYVQRAQPRSERLIALRQKY--MQHQSL----GNN 308
Query: 308 LYVKNLDDSIDDERLRKEFTPFGTITSAK 336
LYV+N D L + F +G + S +
Sbjct: 309 LYVRNFDPEFTGADLLELFKEYGDVKSCR 337
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/232 (30%), Positives = 120/232 (51%), Gaps = 25/232 (10%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
+ ++++ +LD +I+ + + F FG+IL+ +V +D S GYG+V+F+ E+A K+I
Sbjct: 24 IASIYVGDLDAAINEPQLVELFKPFGTILNVRVCRDIITQRSLGYGYVNFDNHESAEKAI 83
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
E +N + K V + ++R+ L NV++KN +D + + L ++F +G
Sbjct: 84 ESMNFKRVGDKCVRLM----WQQRDPALRYSGN--GNVFVKNLEKDVDSKSLHDIFTKFG 137
Query: 229 TITSYRVMNN-DGKSRGFGFVAYESPEFAEKAVQAWNG----KEVDGKILYVGRAQKKAE 283
+I S +VM + +GKSRG+GFV ++ A+ A+ NG D K LYV ++
Sbjct: 138 SILSCKVMQDEEGKSRGYGFVHFKDETSAKDAIVKMNGAADHASEDKKALYVANFIRRNA 197
Query: 284 RTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSA 335
R L F N+Y+K + ++ E + K F FG ITSA
Sbjct: 198 RLAALVANF-------------TNVYIKQVLPTVSKEVIEKFFAKFGGITSA 236
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 107/192 (55%), Gaps = 12/192 (6%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIE-- 169
NV+IK + ++ + + F+ FG I S +D+ G + + F +FE + A K++E
Sbjct: 208 NVYIKQVLPTVSKEVIEKFFAKFGGITSAAACKDKSG--RVFAFCNFEKHDDAVKAVEAM 265
Query: 170 ---KVNGMLLNSKIVFVGKFIPRKEREKELGEK----AKLFTNVYIKNFGEDFNDEKLKE 222
++G+ + ++V + PR ER L +K L N+Y++NF +F L E
Sbjct: 266 HDHHIDGITAPGEKLYVQRAQPRSERLIALRQKYMQHQSLGNNLYVRNFDPEFTGADLLE 325
Query: 223 MFEPYGTITSYRVM-NNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKK 281
+F+ YG + S RVM + G SRGFGFV++ + + A A++ NG+ ++GK L V AQ++
Sbjct: 326 LFKEYGDVKSCRVMVSESGASRGFGFVSFSNADEANAALREMNGRMLNGKPLIVNIAQRR 385
Query: 282 AERTQELKRRFE 293
+R L+ +F+
Sbjct: 386 DQRYTMLRLQFQ 397
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 73/142 (51%), Gaps = 20/142 (14%)
Query: 198 EKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEF 255
+K ++Y+ + N+ +L E+F+P+GTI + RV + +S G+G+V +++ E
Sbjct: 19 DKPMQIASIYVGDLDAAINEPQLVELFKPFGTILNVRVCRDIITQRSLGYGYVNFDNHES 78
Query: 256 AEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGV-NLYVKNLD 314
AEKA+++ N K V K + + Q+ RY G N++VKNL+
Sbjct: 79 AEKAIESMNFKRVGDKCVRLMWQQRDPAL-----------------RYSGNGNVFVKNLE 121
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
+D + L FT FG+I S K
Sbjct: 122 KDVDSKSLHDIFTKFGSILSCK 143
>gi|392355792|ref|XP_228576.4| PREDICTED: polyadenylate-binding protein, cytoplasmic and
nuclear-like [Rattus norvegicus]
Length = 456
Score = 187 bits (476), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 90/144 (62%), Positives = 112/144 (77%), Gaps = 3/144 (2%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP +D +RAL+TMNFD + GRP+RIMWSQRDPSLRKSGVGNVFIKNL K+I
Sbjct: 300 GYAYVNYQQP--VDAKRALETMNFDVINGRPVRIMWSQRDPSLRKSGVGNVFIKNLGKTI 357
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+Y+ FSAFG+ILSCKVA DE+G KGYGFVHF+ +E+A ++I+ +NGM LN + +F
Sbjct: 358 DNKALYNIFSAFGNILSCKVACDEKG-PKGYGFVHFQKQESAERAIDALNGMFLNYRKIF 416
Query: 183 VGKFIPRKEREKELGEKAKLFTNV 206
VG+F KERE E G A+ T+
Sbjct: 417 VGRFKSHKEREAERGAWARQSTSA 440
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 98/179 (54%), Gaps = 7/179 (3%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
++++ +L + +Y+ FS G ILS ++ +D+ S GY +V+++ A +++
Sbjct: 257 TASLYVGDLHPEVTESMLYEKFSPAGPILSIRLCRDKVTRRSLGYAYVNYQQPVDAKRAL 316
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
E +N ++N + V + +R+ L + NV+IKN G+ +++ L +F +G
Sbjct: 317 ETMNFDVINGRPVRIMW----SQRDPSLRKSG--VGNVFIKNLGKTIDNKALYNIFSAFG 370
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQE 287
I S +V ++ +G+GFV ++ E AE+A+ A NG ++ + ++VGR + ER E
Sbjct: 371 NILSCKVACDEKGPKGYGFVHFQKQESAERAIDALNGMFLNYRKIFVGRFKSHKEREAE 429
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 66/136 (48%), Gaps = 20/136 (14%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQ 261
++Y+ + + + L E F P G I S R+ + +S G+ +V Y+ P A++A++
Sbjct: 258 ASLYVGDLHPEVTESMLYEKFSPAGPILSIRLCRDKVTRRSLGYAYVNYQQPVDAKRALE 317
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGV-NLYVKNLDDSIDDE 320
N ++G+ + + +Q R L R GV N+++KNL +ID++
Sbjct: 318 TMNFDVINGRPVRIMWSQ----RDPSL-------------RKSGVGNVFIKNLGKTIDNK 360
Query: 321 RLRKEFTPFGTITSAK 336
L F+ FG I S K
Sbjct: 361 ALYNIFSAFGNILSCK 376
>gi|281204064|gb|EFA78260.1| RNA-binding region RNP-1 domain-containing protein [Polysphondylium
pallidum PN500]
Length = 617
Score = 187 bits (475), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 99/217 (45%), Positives = 146/217 (67%), Gaps = 7/217 (3%)
Query: 75 LDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAF 134
+D ERALDT+N+ + GRP RIMWS RDP+ RKS VGN+F+KNLDK +DN ++DTFS F
Sbjct: 192 IDAERALDTLNYSQIMGRPCRIMWSLRDPTKRKSNVGNIFVKNLDKQVDNAMLFDTFSKF 251
Query: 135 GSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREK 194
G+ILSCK+ + E+G SKGYG+VHFET+E+++++I+ VNG +L K + V +F+ + ER K
Sbjct: 252 GNILSCKI-EYEKGVSKGYGYVHFETQESSDRAIQGVNGTMLCGKPITVEQFVSKVERFK 310
Query: 195 ELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRV-MNNDGKSRGFGFVAYESP 253
E E KLF IKN E E+L+ +G I S + ++N+GKS+G GFV ++S
Sbjct: 311 EKNEH-KLF----IKNIDELATVEQLQAELSRFGEIESCIIRLDNNGKSKGLGFVEFKSV 365
Query: 254 EFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKR 290
E A++ + ++ K + + R + K ER E ++
Sbjct: 366 EDAQRLMDNPEPIQILSKPITIDRIKNKMERNIEHRQ 402
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 107/227 (47%), Gaps = 26/227 (11%)
Query: 113 VFIKNLDKSIDNKAMYDTFSAFG--SILSCKVAQDE-QGNSKGYGFVHFETEEAANKSIE 169
+++ +L ++ + + FS G ++ S V +D S GY +V+F A ++++
Sbjct: 140 LYVGDLAPDVNEIMLSELFSKVGRSAVASIHVCRDSITFRSLGYAYVNFFNSIDAERALD 199
Query: 170 KVN-GMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+N ++ + +R+ +G N+++KN + ++ L + F +G
Sbjct: 200 TLNYSQIMGRPCRIMWSLRDPTKRKSNVG-------NIFVKNLDKQVDNAMLFDTFSKFG 252
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S ++ G S+G+G+V +E+ E +++A+Q NG + GK + V + K ER +E
Sbjct: 253 NILSCKIEYEKGVSKGYGYVHFETQESSDRAIQGVNGTMLCGKPITVEQFVSKVERFKEK 312
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSA 335
L++KN+D+ E+L+ E + FG I S
Sbjct: 313 NEH---------------KLFIKNIDELATVEQLQAELSRFGEIESC 344
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 50/71 (70%), Gaps = 1/71 (1%)
Query: 113 VFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVN 172
+FI N+D+SID + + + F+ G+IL K+ Q E G ++G+GF+ + T+E AN +IEK+N
Sbjct: 461 LFIHNIDESIDKEVIREEFAKHGTILGIKIVQ-ENGKNRGFGFLSYSTQEEANIAIEKMN 519
Query: 173 GMLLNSKIVFV 183
G +L SK + V
Sbjct: 520 GFILGSKPLSV 530
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
Query: 206 VYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNG 265
++I N E + E ++E F +GTI +++ +GK+RGFGF++Y + E A A++ NG
Sbjct: 461 LFIHNIDESIDKEVIREEFAKHGTILGIKIVQENGKNRGFGFLSYSTQEEANIAIEKMNG 520
Query: 266 KEVDGKILYVGRAQKK-AERTQELK 289
+ K L V + +K +R Q+L+
Sbjct: 521 FILGSKPLSVSFSNRKYKKRMQQLQ 545
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 63/142 (44%), Gaps = 22/142 (15%)
Query: 200 AKLFTNVYIKNFGEDFNDEKLKEMFEPYG--TITSYRVMNND--GKSRGFGFVAYESPEF 255
A +T++Y+ + D N+ L E+F G + S V + +S G+ +V + +
Sbjct: 134 ASQYTSLYVGDLAPDVNEIMLSELFSKVGRSAVASIHVCRDSITFRSLGYAYVNFFNSID 193
Query: 256 AEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGV-NLYVKNLD 314
AE+A+ N ++ G+ + + + + R V N++VKNLD
Sbjct: 194 AERALDTLNYSQIMGRPCRIMWSLRDPTK-----------------RKSNVGNIFVKNLD 236
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
+D+ L F+ FG I S K
Sbjct: 237 KQVDNAMLFDTFSKFGNILSCK 258
>gi|293351002|ref|XP_001054954.2| PREDICTED: polyadenylate-binding protein, cytoplasmic and
nuclear-like [Rattus norvegicus]
Length = 438
Score = 187 bits (474), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 86/132 (65%), Positives = 108/132 (81%), Gaps = 1/132 (0%)
Query: 75 LDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAF 134
+D +RAL+TMNFD + GRP+RIMWSQRDPSLRKSGVGNVFIKNL K+IDNKA+Y+ FSAF
Sbjct: 292 VDAKRALETMNFDVINGRPVRIMWSQRDPSLRKSGVGNVFIKNLGKTIDNKALYNIFSAF 351
Query: 135 GSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREK 194
G+ILSCKVA DE+G KGYGFVHF+ +E+A ++I+ +NGM LN + +FVG+F KERE
Sbjct: 352 GNILSCKVACDEKG-PKGYGFVHFQKQESAERAIDALNGMFLNYRKIFVGRFKSHKEREA 410
Query: 195 ELGEKAKLFTNV 206
E G A+ T+
Sbjct: 411 ERGAWARQSTSA 422
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 98/179 (54%), Gaps = 7/179 (3%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
++++ +L + +Y+ FS G ILS ++ +D+ S GY +V+++ A +++
Sbjct: 239 TASLYVGDLHPEVTESMLYEKFSPAGPILSIRLCRDKVTRRSLGYAYVNYQQPVDAKRAL 298
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
E +N ++N + V + +R+ L + NV+IKN G+ +++ L +F +G
Sbjct: 299 ETMNFDVINGRPVRIMW----SQRDPSL--RKSGVGNVFIKNLGKTIDNKALYNIFSAFG 352
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQE 287
I S +V ++ +G+GFV ++ E AE+A+ A NG ++ + ++VGR + ER E
Sbjct: 353 NILSCKVACDEKGPKGYGFVHFQKQESAERAIDALNGMFLNYRKIFVGRFKSHKEREAE 411
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 66/136 (48%), Gaps = 20/136 (14%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQ 261
++Y+ + + + L E F P G I S R+ + +S G+ +V Y+ P A++A++
Sbjct: 240 ASLYVGDLHPEVTESMLYEKFSPAGPILSIRLCRDKVTRRSLGYAYVNYQQPVDAKRALE 299
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGV-NLYVKNLDDSIDDE 320
N ++G+ + + +Q R L R GV N+++KNL +ID++
Sbjct: 300 TMNFDVINGRPVRIMWSQ----RDPSL-------------RKSGVGNVFIKNLGKTIDNK 342
Query: 321 RLRKEFTPFGTITSAK 336
L F+ FG I S K
Sbjct: 343 ALYNIFSAFGNILSCK 358
>gi|294939182|ref|XP_002782349.1| RNA-binding motif, single-stranded-interacting protein, putative
[Perkinsus marinus ATCC 50983]
gi|239893941|gb|EER14144.1| RNA-binding motif, single-stranded-interacting protein, putative
[Perkinsus marinus ATCC 50983]
Length = 266
Score = 187 bits (474), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 86/160 (53%), Positives = 119/160 (74%), Gaps = 3/160 (1%)
Query: 74 MLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSA 133
+ D ERALDT+N+ + GRP R+MWS RDP+LR+SG GNV++KNLD++IDNKA+YDTFS
Sbjct: 99 VADAERALDTLNYSPINGRPCRLMWSHRDPALRRSGAGNVYVKNLDRNIDNKALYDTFSL 158
Query: 134 FGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKERE 193
FG+ILSCKVA G S+G+GFVHFE++E+A +I K+NGM + K V+V +F +K +
Sbjct: 159 FGNILSCKVALTPDGKSRGFGFVHFESDESAEAAIAKLNGMQIGEKTVYVAQF--KKTAD 216
Query: 194 KELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSY 233
+ G K FTNVYIK+ + +EK++E F +G ITS+
Sbjct: 217 RSDGSP-KNFTNVYIKHIPPSWTEEKIREEFGAFGEITSF 255
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 121/240 (50%), Gaps = 26/240 (10%)
Query: 102 DPSLRKSGV-----GNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGF 155
DP+ GV +++ +L ++ +Y+ F+ G + S +V +D S GY +
Sbjct: 34 DPAPTVGGVPTQQFASLYAGDLAPDVNEAVLYEVFNGIGPVASIRVCRDSVTRKSLGYAY 93
Query: 156 VHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDF 215
++F A ++++ +N +N + + R+ L NVY+KN +
Sbjct: 94 INFHNVADAERALDTLNYSPINGRPCR----LMWSHRDPALRRSGA--GNVYVKNLDRNI 147
Query: 216 NDEKLKEMFEPYGTITSYRV-MNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILY 274
+++ L + F +G I S +V + DGKSRGFGFV +ES E AE A+ NG ++ K +Y
Sbjct: 148 DNKALYDTFSLFGNILSCKVALTPDGKSRGFGFVHFESDESAEAAIAKLNGMQIGEKTVY 207
Query: 275 VGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITS 334
V + +K A+R+ + F N+Y+K++ S +E++R+EF FG ITS
Sbjct: 208 VAQFKKTADRSDGSPKNF-------------TNVYIKHIPPSWTEEKIREEFGAFGEITS 254
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 64/142 (45%), Gaps = 18/142 (12%)
Query: 197 GEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND--GKSRGFGFVAYESPE 254
G + F ++Y + D N+ L E+F G + S RV + KS G+ ++ + +
Sbjct: 41 GVPTQQFASLYAGDLAPDVNEAVLYEVFNGIGPVASIRVCRDSVTRKSLGYAYINFHNVA 100
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
AE+A+ N ++G+ + + + L R N+YVKNLD
Sbjct: 101 DAERALDTLNYSPINGRPCRLMWSHRDPA----------------LRRSGAGNVYVKNLD 144
Query: 315 DSIDDERLRKEFTPFGTITSAK 336
+ID++ L F+ FG I S K
Sbjct: 145 RNIDNKALYDTFSLFGNILSCK 166
>gi|12836631|dbj|BAB23742.1| unnamed protein product [Mus musculus]
Length = 168
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 90/119 (75%), Positives = 101/119 (84%), Gaps = 3/119 (2%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD +KG+P+RIMWSQRDPSLRKSGVGN+FIKNLDKSI
Sbjct: 53 GYAYVNFQQP--ADAERALDTMNFDVIKGKPVRIMWSQRDPSLRKSGVGNIFIKNLDKSI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIV 181
DNKA+YDTFSAFG+ILSCKV DE G SKGYGFVHFET+EAA ++IEK+NGMLLN + V
Sbjct: 111 DNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKV 168
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 90/165 (54%), Gaps = 7/165 (4%)
Query: 102 DPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFET 160
+PS + ++++ +L + +Y+ FS G ILS +V +D S GY +V+F+
Sbjct: 2 NPSAPSYPMASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 161 EEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKL 220
A ++++ +N ++ K V I +R+ L + N++IKN + +++ L
Sbjct: 62 PADAERALDTMNFDVIKGKPVR----IMWSQRDPSLRKSG--VGNIFIKNLDKSIDNKAL 115
Query: 221 KEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNG 265
+ F +G I S +V+ ++ S+G+GFV +E+ E AE+A++ NG
Sbjct: 116 YDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMNG 160
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 64/137 (46%), Gaps = 20/137 (14%)
Query: 203 FTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAV 260
++Y+ + D + L E F P G I S RV + +S G+ +V ++ P AE+A+
Sbjct: 10 MASLYVGDLHPDVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERAL 69
Query: 261 QAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGV-NLYVKNLDDSIDD 319
N + GK + + +Q+ R GV N+++KNLD SID+
Sbjct: 70 DTMNFDVIKGKPVRIMWSQRDPSL-----------------RKSGVGNIFIKNLDKSIDN 112
Query: 320 ERLRKEFTPFGTITSAK 336
+ L F+ FG I S K
Sbjct: 113 KALYDTFSAFGNILSCK 129
>gi|449016981|dbj|BAM80383.1| polyadenylate-binding protein [Cyanidioschyzon merolae strain 10D]
Length = 999
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 89/161 (55%), Positives = 114/161 (70%), Gaps = 5/161 (3%)
Query: 76 DTERALDTMNF---DALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFS 132
D ERA+D + F K +PIRIMW + DPS R++ GN+FIKNLDKSIDNKA+YDTFS
Sbjct: 229 DAERAIDVLQFYEGPLTKNKPIRIMWKRSDPSQRRNPEGNIFIKNLDKSIDNKALYDTFS 288
Query: 133 AFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKER 192
FG +LSCK+A D++GNS GY FVH++ A I K+NGMLLN + V+VG+F PR+ER
Sbjct: 289 TFGKVLSCKLATDDKGNSLGYAFVHYQDANVAKYVISKMNGMLLNGQKVYVGEFRPRRER 348
Query: 193 EKELGEKAKLFTNVYIKNFGEDF-NDEKLKEMFEPYGTITS 232
E GE + FTNVY+KN E E++ ++F PYG ITS
Sbjct: 349 EA-TGELSTKFTNVYVKNLDESLCTTEEVTKLFAPYGNITS 388
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 85/244 (34%), Positives = 122/244 (50%), Gaps = 64/244 (26%)
Query: 112 NVFIKNLDKSI-DNKAMYDTFSAFGSILS----CKVAQDEQGNSKGYGFVHFETEEAANK 166
NV++KNLD+S+ + + F+ +G+I S + Q++Q H E E A
Sbjct: 360 NVYVKNLDESLCTTEEVTKLFAPYGNITSIFIPTETVQEQQ--------PHHEDEHRA-- 409
Query: 167 SIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEP 226
P +E E G + ++ +K+ G D ++ E
Sbjct: 410 ---------------------PSEEASSEAGRQGG--SSQEVKSAGADQSNAAPD--LE- 443
Query: 227 YGTITSYRVMNNDG----------------KSRGFGFVAYESPEFAEKAVQAWNGKEVDG 270
TS R NDG + RGF FV +E+PE A AV+A NG E++G
Sbjct: 444 ----TSER---NDGAKAPENRAHAQSVVRVRPRGFAFVNFETPEQAAAAVEALNGMELNG 496
Query: 271 KILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFG 330
K LYVGRAQKKAER L+ + E L+ +R+ + Q VNL+VKNL D +D+ RLR+EF+ FG
Sbjct: 497 KTLYVGRAQKKAEREAMLRAQMEQLRNDRMQKLQDVNLFVKNLSDDVDENRLREEFSRFG 556
Query: 331 TITS 334
TITS
Sbjct: 557 TITS 560
Score = 108 bits (269), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 59/160 (36%), Positives = 97/160 (60%), Gaps = 12/160 (7%)
Query: 151 KGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLF------- 203
+G+ FV+FET E A ++E +NGM LN K ++VG+ + ERE L + +
Sbjct: 469 RGFAFVNFETPEQAAAAVEALNGMELNGKTLYVGRAQKKAEREAMLRAQMEQLRNDRMQK 528
Query: 204 ---TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAEKA 259
N+++KN +D ++ +L+E F +GTITS R+M ++ G S+GFGFVA+ P+ A KA
Sbjct: 529 LQDVNLFVKNLSDDVDENRLREEFSRFGTITSLRIMRDEKGVSKGFGFVAFSHPDEAIKA 588
Query: 260 VQAWNGKEVDGKILYVGRAQKKAERTQELK-RRFEMLKIE 298
V N + V K +YV AQ+K +R +++ +R M++ +
Sbjct: 589 VTEMNQRIVGQKPIYVALAQRKDQRRAQIEAQRAAMMRAQ 628
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 126/247 (51%), Gaps = 36/247 (14%)
Query: 103 PSLRKSGVG-----NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFV 156
P+ SG G ++++ +L + + +++ FS+ G ++S +V +D S GY +V
Sbjct: 163 PAASASGTGELPNVSLYVGDLQPDVVEQNLFELFSSVGPVVSVRVCRDVVTRRSLGYAYV 222
Query: 157 HFETEEAANKSIEKVN---GMLLNSKIVFV--GKFIPRKEREKELGEKAKLFTNVYIKNF 211
+F+ E A ++I+ + G L +K + + + P + R E N++IKN
Sbjct: 223 NFQNPEDAERAIDVLQFYEGPLTKNKPIRIMWKRSDPSQRRNPE--------GNIFIKNL 274
Query: 212 GEDFNDEKLKEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDG 270
+ +++ L + F +G + S ++ +D G S G+ FV Y+ A+ + NG ++G
Sbjct: 275 DKSIDNKALYDTFSTFGKVLSCKLATDDKGNSLGYAFVHYQDANVAKYVISKMNGMLLNG 334
Query: 271 KILYVG--RAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSI-DDERLRKEFT 327
+ +YVG R +++ E T EL +F N+YVKNLD+S+ E + K F
Sbjct: 335 QKVYVGEFRPRREREATGELSTKF-------------TNVYVKNLDESLCTTEEVTKLFA 381
Query: 328 PFGTITS 334
P+G ITS
Sbjct: 382 PYGNITS 388
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 47/72 (65%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
N+F+KNL +D + + FS FG+I S ++ +DE+G SKG+GFV F + A K++ ++
Sbjct: 533 NLFVKNLSDDVDENRLREEFSRFGTITSLRIMRDEKGVSKGFGFVAFSHPDEAIKAVTEM 592
Query: 172 NGMLLNSKIVFV 183
N ++ K ++V
Sbjct: 593 NQRIVGQKPIYV 604
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 70/137 (51%), Gaps = 21/137 (15%)
Query: 205 NVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAV-- 260
++Y+ + D ++ L E+F G + S RV + +S G+ +V +++PE AE+A+
Sbjct: 177 SLYVGDLQPDVVEQNLFELFSSVGPVVSVRVCRDVVTRRSLGYAYVNFQNPEDAERAIDV 236
Query: 261 -QAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDD 319
Q + G K + + K+++ +Q +R E N+++KNLD SID+
Sbjct: 237 LQFYEGPLTKNKPIRI--MWKRSDPSQ--RRNPEG------------NIFIKNLDKSIDN 280
Query: 320 ERLRKEFTPFGTITSAK 336
+ L F+ FG + S K
Sbjct: 281 KALYDTFSTFGKVLSCK 297
>gi|309271474|ref|XP_003085306.1| PREDICTED: polyadenylate-binding protein 1-like 2-like [Mus
musculus]
Length = 229
Score = 185 bits (469), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 90/144 (62%), Positives = 112/144 (77%), Gaps = 3/144 (2%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP +D +RAL+TMNFD + GRP+RIMWSQRDPSLRKSGVGNVFIKNL K+I
Sbjct: 73 GYAYVNYQQP--VDAKRALETMNFDVINGRPVRIMWSQRDPSLRKSGVGNVFIKNLGKTI 130
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+Y+ FSAFG+ILSCKVA DE+G KGYGFVHF+ +E+A ++I+ +NGM LN + +F
Sbjct: 131 DNKALYNIFSAFGNILSCKVACDEKG-PKGYGFVHFQKQESAERAIDALNGMFLNYRKIF 189
Query: 183 VGKFIPRKEREKELGEKAKLFTNV 206
VG+F KERE E G A+ T+
Sbjct: 190 VGRFKSHKEREAERGAWARQSTSA 213
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 98/179 (54%), Gaps = 7/179 (3%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
++++ +L + +Y+ FS G ILS ++ +D+ S GY +V+++ A +++
Sbjct: 30 TASLYVGDLHPEVTESMLYEKFSPAGPILSIRICRDKVTRRSLGYAYVNYQQPVDAKRAL 89
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
E +N ++N + V I +R+ L + NV+IKN G+ +++ L +F +G
Sbjct: 90 ETMNFDVINGRPVR----IMWSQRDPSLRKSG--VGNVFIKNLGKTIDNKALYNIFSAFG 143
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQE 287
I S +V ++ +G+GFV ++ E AE+A+ A NG ++ + ++VGR + ER E
Sbjct: 144 NILSCKVACDEKGPKGYGFVHFQKQESAERAIDALNGMFLNYRKIFVGRFKSHKEREAE 202
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 65/136 (47%), Gaps = 20/136 (14%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQ 261
++Y+ + + + L E F P G I S R+ + +S G+ +V Y+ P A++A++
Sbjct: 31 ASLYVGDLHPEVTESMLYEKFSPAGPILSIRICRDKVTRRSLGYAYVNYQQPVDAKRALE 90
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGV-NLYVKNLDDSIDDE 320
N ++G+ + + +Q+ R GV N+++KNL +ID++
Sbjct: 91 TMNFDVINGRPVRIMWSQRDPSL-----------------RKSGVGNVFIKNLGKTIDNK 133
Query: 321 RLRKEFTPFGTITSAK 336
L F+ FG I S K
Sbjct: 134 ALYNIFSAFGNILSCK 149
>gi|341883809|gb|EGT39744.1| hypothetical protein CAEBREN_05859 [Caenorhabditis brenneri]
Length = 467
Score = 184 bits (468), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 102/165 (61%), Positives = 126/165 (76%), Gaps = 2/165 (1%)
Query: 174 MLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSY 233
MLL K VFVGKF PR +R +ELGE AK +TNVY+KNFG+ +N E L+++F YGTITS
Sbjct: 1 MLLAGKKVFVGKFQPRAQRNRELGETAKKYTNVYVKNFGDHYNKESLEKLFAKYGTITSC 60
Query: 234 RVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGK--ILYVGRAQKKAERTQELKRR 291
VM +DGKS+GFGFVA+ PE AE AVQA N V+G L+V RAQKK+ER ELK++
Sbjct: 61 DVMTSDGKSKGFGFVAFAEPEEAEAAVQALNDSPVEGSDLKLHVCRAQKKSERHAELKKK 120
Query: 292 FEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
E K+ER+ +YQGVNLYVKNLD+S+DDE L+K+F FG ITSAK
Sbjct: 121 HEQHKVERMQKYQGVNLYVKNLDESVDDEALKKQFESFGNITSAK 165
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/194 (35%), Positives = 106/194 (54%), Gaps = 14/194 (7%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV++KN + +++ F+ +G+I SC V + G SKG+GFV F E A +++ +
Sbjct: 32 NVYVKNFGDHYNKESLEKLFAKYGTITSCDVMTSD-GKSKGFGFVAFAEPEEAEAAVQAL 90
Query: 172 NGMLLNSK--IVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEK 219
N + + V + + ER EL +K + N+Y+KN E +DE
Sbjct: 91 NDSPVEGSDLKLHVCRAQKKSERHAELKKKHEQHKVERMQKYQGVNLYVKNLDESVDDEA 150
Query: 220 LKEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRA 278
LK+ FE +G ITS +VM ++ G+S+GFGFV +E PE A AV N K V K LYV A
Sbjct: 151 LKKQFESFGNITSAKVMTDENGRSKGFGFVCFEKPEEATTAVTEMNSKMVCSKPLYVALA 210
Query: 279 QKKAERTQELKRRF 292
Q+K +R +L ++
Sbjct: 211 QRKEDRRAQLASQY 224
>gi|398016302|ref|XP_003861339.1| poly(A)-binding protein, putative [Leishmania donovani]
gi|322499565|emb|CBZ34638.1| poly(A)-binding protein, putative [Leishmania donovani]
Length = 544
Score = 182 bits (461), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 121/310 (39%), Positives = 163/310 (52%), Gaps = 21/310 (6%)
Query: 32 EGVSRSLSSLIDGNTVKYDWDSGYTCHQLGSGAILVQLGQPYMLDTERALDTMNFDAL-K 90
E ++ S++ +VK D T LG G + Q D E+ +D +N+ +
Sbjct: 24 EAINNLFSTVAPVVSVKVCRDMA-TQRSLGYGYVNFQT----TADAEKVIDALNYTGIAP 78
Query: 91 GRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNS 150
GR IR+M+S RDP RKSG+ NVF+K LD +I+ K + F+ G +LSCKVA D GNS
Sbjct: 79 GRQIRVMFSIRDPLQRKSGMNNVFVKKLDTAINAKELQAAFTKCGRVLSCKVALDSAGNS 138
Query: 151 KGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKN 210
KGYGFV FET E A +++ +NG L V V F+ R +RE AK F N+YIKN
Sbjct: 139 KGYGFVQFETAEGAKAALD-MNGSKLGDSEVVVAPFVRRVDREV---MAAKSFRNIYIKN 194
Query: 211 FGEDFNDEKLKEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDG 270
+ +K E +G + S + + F VA+E E A +A+ A N E G
Sbjct: 195 IAAAATEADVKAAAEKFGKVNSLFLSEHAPFPTKFALVAFEEHEAAVQAIAALNESEESG 254
Query: 271 KI-----LYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKE 325
L V RA K+ER +E K K L + G NLYVK+L D I D+RLR+
Sbjct: 255 LTEKAAKLVVCRALSKSERDREKK------KAASLYQNHGRNLYVKHLPDDITDDRLREI 308
Query: 326 FTPFGTITSA 335
F PFG ITS
Sbjct: 309 FEPFGKITSC 318
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 106/192 (55%), Gaps = 13/192 (6%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
N++IKN+ + + FG + S +++ +K + V FE EAA ++I +
Sbjct: 189 NIYIKNIAAAATEADVKAAAEKFGKVNSLFLSEHAPFPTK-FALVAFEEHEAAVQAIAAL 247
Query: 172 N-----GMLLNSKIVFVGKFIPRKEREKELGEKAKLFTN----VYIKNFGEDFNDEKLKE 222
N G+ + + V + + + ER++E + A L+ N +Y+K+ +D D++L+E
Sbjct: 248 NESEESGLTEKAAKLVVCRALSKSERDREKKKAASLYQNHGRNLYVKHLPDDITDDRLRE 307
Query: 223 MFEPYGTITSYRVMNN-DGKSRGFGFVAYESPEFAEKAVQAWNGKEVDG--KILYVGRAQ 279
+FEP+G ITS +M +G +GF FV +E + A A+++ NG+ ++ K LYV A+
Sbjct: 308 IFEPFGKITSCAIMKEPNGTFKGFAFVCFEDRQHASAALRSLNGQPLEHSKKPLYVSHAE 367
Query: 280 KKAERTQELKRR 291
+K R + L++R
Sbjct: 368 QKDMRIRLLQQR 379
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 41/73 (56%)
Query: 104 SLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEA 163
SL ++ N+++K+L I + + + F FG I SC + ++ G KG+ FV FE +
Sbjct: 282 SLYQNHGRNLYVKHLPDDITDDRLREIFEPFGKITSCAIMKEPNGTFKGFAFVCFEDRQH 341
Query: 164 ANKSIEKVNGMLL 176
A+ ++ +NG L
Sbjct: 342 ASAALRSLNGQPL 354
>gi|157870420|ref|XP_001683760.1| poly(A)-binding protein 3 [Leishmania major strain Friedlin]
gi|68126827|emb|CAJ04400.1| poly(A)-binding protein 3 [Leishmania major strain Friedlin]
Length = 544
Score = 181 bits (459), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 119/310 (38%), Positives = 163/310 (52%), Gaps = 21/310 (6%)
Query: 32 EGVSRSLSSLIDGNTVKYDWDSGYTCHQLGSGAILVQLGQPYMLDTERALDTMNFDAL-K 90
E ++ S++ +VK D T LG G + Q D E+ +D +N+ +
Sbjct: 24 EAINNLFSTVAPVVSVKVCRDMA-TQRSLGYGYVNFQTTA----DAEKVIDALNYTGIAP 78
Query: 91 GRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNS 150
GR IR+M+S RDP RKSG+ NVF+K LD +I+ K + FS G +LSCKVA D GNS
Sbjct: 79 GRQIRVMFSIRDPLQRKSGMNNVFVKKLDTAINAKELQAAFSKCGRVLSCKVALDSAGNS 138
Query: 151 KGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKN 210
KGYGFV FET + ++E +NG L V V F+ R +RE AK F N+YIKN
Sbjct: 139 KGYGFVQFETADGTKAALE-MNGSKLGDSEVVVAPFVRRVDRE---AMAAKSFRNIYIKN 194
Query: 211 FGEDFNDEKLKEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDG 270
+ +K + E +G + S + + F VA+E + A +A+ A N E G
Sbjct: 195 ITASATEADVKAIVEEFGKVDSLFLSEHARFPTKFALVAFEEHQAAVQAIAALNESEESG 254
Query: 271 KI-----LYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKE 325
L V RA K+ER +E K K L + G NLY+K+L D I D+RLR+
Sbjct: 255 LTEKAVKLVVCRALSKSERDREKK------KAASLYQNHGRNLYIKHLPDDITDDRLREI 308
Query: 326 FTPFGTITSA 335
F PFG ITS
Sbjct: 309 FEPFGKITSC 318
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 106/192 (55%), Gaps = 13/192 (6%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
N++IKN+ S + FG + S +++ + +K + V FE +AA ++I +
Sbjct: 189 NIYIKNITASATEADVKAIVEEFGKVDSLFLSEHARFPTK-FALVAFEEHQAAVQAIAAL 247
Query: 172 N-----GMLLNSKIVFVGKFIPRKEREKELGEKAKLFTN----VYIKNFGEDFNDEKLKE 222
N G+ + + V + + + ER++E + A L+ N +YIK+ +D D++L+E
Sbjct: 248 NESEESGLTEKAVKLVVCRALSKSERDREKKKAASLYQNHGRNLYIKHLPDDITDDRLRE 307
Query: 223 MFEPYGTITSYRVMNN-DGKSRGFGFVAYESPEFAEKAVQAWNGKEVD--GKILYVGRAQ 279
+FEP+G ITS +M +G +GF FV +E + A A+++ NG ++ K LYV A+
Sbjct: 308 IFEPFGKITSCAIMKEPNGTLKGFAFVCFEDKQHASAALRSLNGHPLEHSAKPLYVSHAE 367
Query: 280 KKAERTQELKRR 291
+K R + L++R
Sbjct: 368 QKDMRIRLLQQR 379
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 48/83 (57%), Gaps = 2/83 (2%)
Query: 104 SLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEA 163
SL ++ N++IK+L I + + + F FG I SC + ++ G KG+ FV FE ++
Sbjct: 282 SLYQNHGRNLYIKHLPDDITDDRLREIFEPFGKITSCAIMKEPNGTLKGFAFVCFEDKQH 341
Query: 164 ANKSIEKVNGMLL--NSKIVFVG 184
A+ ++ +NG L ++K ++V
Sbjct: 342 ASAALRSLNGHPLEHSAKPLYVS 364
>gi|401423147|ref|XP_003876060.1| putative poly(A)-binding protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322492301|emb|CBZ27575.1| putative poly(A)-binding protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 544
Score = 180 bits (457), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 120/310 (38%), Positives = 163/310 (52%), Gaps = 21/310 (6%)
Query: 32 EGVSRSLSSLIDGNTVKYDWDSGYTCHQLGSGAILVQLGQPYMLDTERALDTMNFDAL-K 90
E ++ S++ +VK D T LG G + Q D E+ +D +N+ +
Sbjct: 24 EAINNLFSTVAPVVSVKVCRDMA-TQRSLGYGYVNFQTPA----DAEKVIDALNYTGITP 78
Query: 91 GRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNS 150
GR IR+M+S RDP RKSG+ NVF+K LD +++ K + F+ G +LSCKVA D GNS
Sbjct: 79 GRQIRVMFSIRDPIQRKSGMNNVFVKKLDTAVNAKELQAAFTKCGRVLSCKVALDSAGNS 138
Query: 151 KGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKN 210
KGYGFV FET + A ++E ++G L V V F+ R +RE AK F N+YIKN
Sbjct: 139 KGYGFVQFETADGAKAALE-MDGSKLGDCEVVVAPFLRRVDREV---MAAKSFRNIYIKN 194
Query: 211 FGEDFNDEKLKEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDG 270
+ +K E +G + S + + F VA+E E A KA+ A N E G
Sbjct: 195 LKATVAEADVKTTVETFGKVNSLFLSEHAPFPTKFALVAFEEHEAAVKAIAALNESEESG 254
Query: 271 KI-----LYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKE 325
L V RA K+ER +E K K L + G NLYVK+L D I D+RLR+
Sbjct: 255 LTEKAAKLVVCRALSKSERDREKK------KAASLYQNHGRNLYVKHLPDDITDDRLREI 308
Query: 326 FTPFGTITSA 335
F PFG ITS
Sbjct: 309 FAPFGKITSC 318
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 108/192 (56%), Gaps = 13/192 (6%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
N++IKNL ++ + T FG + S +++ +K + V FE EAA K+I +
Sbjct: 189 NIYIKNLKATVAEADVKTTVETFGKVNSLFLSEHAPFPTK-FALVAFEEHEAAVKAIAAL 247
Query: 172 N-----GMLLNSKIVFVGKFIPRKEREKELGEKAKLFTN----VYIKNFGEDFNDEKLKE 222
N G+ + + V + + + ER++E + A L+ N +Y+K+ +D D++L+E
Sbjct: 248 NESEESGLTEKAAKLVVCRALSKSERDREKKKAASLYQNHGRNLYVKHLPDDITDDRLRE 307
Query: 223 MFEPYGTITSYRVMNN-DGKSRGFGFVAYESPEFAEKAVQAWNGKEVDG--KILYVGRAQ 279
+F P+G ITS +M +G +GF FV +E + A A+++ NG +D K+LYV +A+
Sbjct: 308 IFAPFGKITSCAIMKEPNGTFKGFAFVCFEDRQHASAALRSLNGHSLDNSKKLLYVSQAE 367
Query: 280 KKAERTQELKRR 291
+K R + L++R
Sbjct: 368 QKDMRIRLLQQR 379
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 106/221 (47%), Gaps = 25/221 (11%)
Query: 118 LDKSIDNKAMYDTFSAFGSILSCKVAQD-EQGNSKGYGFVHFETEEAANKSIEKVN--GM 174
+D +A+ + FS ++S KV +D S GYG+V+F+T A K I+ +N G+
Sbjct: 17 IDLPRPEEAINNLFSTVAPVVSVKVCRDMATQRSLGYGYVNFQTPADAEKVIDALNYTGI 76
Query: 175 LLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYR 234
+I + F R +++ G NV++K N ++L+ F G + S +
Sbjct: 77 TPGRQIRVM--FSIRDPIQRKSG-----MNNVFVKKLDTAVNAKELQAAFTKCGRVLSCK 129
Query: 235 V-MNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFE 293
V +++ G S+G+GFV +E+ + A+ A++ K D +++ V ++ +R + F
Sbjct: 130 VALDSAGNSKGYGFVQFETADGAKAALEMDGSKLGDCEVV-VAPFLRRVDREVMAAKSFR 188
Query: 294 MLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITS 334
N+Y+KNL ++ + ++ FG + S
Sbjct: 189 -------------NIYIKNLKATVAEADVKTTVETFGKVNS 216
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 50/84 (59%), Gaps = 2/84 (2%)
Query: 104 SLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEA 163
SL ++ N+++K+L I + + + F+ FG I SC + ++ G KG+ FV FE +
Sbjct: 282 SLYQNHGRNLYVKHLPDDITDDRLREIFAPFGKITSCAIMKEPNGTFKGFAFVCFEDRQH 341
Query: 164 ANKSIEKVNGMLLNS--KIVFVGK 185
A+ ++ +NG L++ K+++V +
Sbjct: 342 ASAALRSLNGHSLDNSKKLLYVSQ 365
Score = 45.4 bits (106), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 63/139 (45%), Gaps = 23/139 (16%)
Query: 204 TNVYIKNFGEDFN--DEKLKEMFEPYGTITSYRVMNNDGKSR--GFGFVAYESPEFAEKA 259
T+VY+ + D +E + +F + S +V + R G+G+V +++P AEK
Sbjct: 8 TSVYVGDLPIDLPRPEEAINNLFSTVAPVVSVKVCRDMATQRSLGYGYVNFQTPADAEKV 67
Query: 260 VQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKI-ERLNRYQGV-NLYVKNLDDSI 317
+ A N Y G + R M I + + R G+ N++VK LD ++
Sbjct: 68 IDALN---------YTGITPGRQIRV--------MFSIRDPIQRKSGMNNVFVKKLDTAV 110
Query: 318 DDERLRKEFTPFGTITSAK 336
+ + L+ FT G + S K
Sbjct: 111 NAKELQAAFTKCGRVLSCK 129
>gi|344281910|ref|XP_003412719.1| PREDICTED: hypothetical protein LOC100664266 [Loxodonta africana]
Length = 708
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 81/119 (68%), Positives = 102/119 (85%), Gaps = 1/119 (0%)
Query: 75 LDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAF 134
+D +RAL+T+NFD +KGRP+RIMWSQRDPSLRKSGVGNVFIKNL K+IDNKA+Y+ FS F
Sbjct: 403 VDAKRALETLNFDVIKGRPVRIMWSQRDPSLRKSGVGNVFIKNLGKTIDNKALYNIFSTF 462
Query: 135 GSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKERE 193
G+ILSCKVA DE+G KGYGFVHF+ +E+A ++I+ +NGM LN + +FVG+F KERE
Sbjct: 463 GNILSCKVACDEKG-PKGYGFVHFQEQESAERAIDVMNGMFLNYRKIFVGRFKSHKERE 520
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 101/191 (52%), Gaps = 12/191 (6%)
Query: 95 RIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGY 153
RI+ + DP ++++ +L + +Y+ FS G ILS ++ +D+ S GY
Sbjct: 340 RIISASPDPP-----TASLYVGDLHPEVTEAMLYEKFSPAGRILSIRICRDKITRRSLGY 394
Query: 154 GFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGE 213
+V+++ A +++E +N ++ + V + +R+ L + NV+IKN G+
Sbjct: 395 AYVNYQQPVDAKRALETLNFDVIKGRPVRIM----WSQRDPSLRKSG--VGNVFIKNLGK 448
Query: 214 DFNDEKLKEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKIL 273
+++ L +F +G I S +V ++ +G+GFV ++ E AE+A+ NG ++ + +
Sbjct: 449 TIDNKALYNIFSTFGNILSCKVACDEKGPKGYGFVHFQEQESAERAIDVMNGMFLNYRKI 508
Query: 274 YVGRAQKKAER 284
+VGR + ER
Sbjct: 509 FVGRFKSHKER 519
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 64/136 (47%), Gaps = 20/136 (14%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQ 261
++Y+ + + + L E F P G I S R+ + +S G+ +V Y+ P A++A++
Sbjct: 351 ASLYVGDLHPEVTEAMLYEKFSPAGRILSIRICRDKITRRSLGYAYVNYQQPVDAKRALE 410
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGV-NLYVKNLDDSIDDE 320
N + G+ + + +Q+ R GV N+++KNL +ID++
Sbjct: 411 TLNFDVIKGRPVRIMWSQRDPSL-----------------RKSGVGNVFIKNLGKTIDNK 453
Query: 321 RLRKEFTPFGTITSAK 336
L F+ FG I S K
Sbjct: 454 ALYNIFSTFGNILSCK 469
>gi|449486336|ref|XP_004177123.1| PREDICTED: embryonic polyadenylate-binding protein A-like
[Taeniopygia guttata]
Length = 167
Score = 179 bits (455), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 87/119 (73%), Positives = 97/119 (81%), Gaps = 3/119 (2%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G + QP D ERALDTMNF+ +KGRPIRIMWSQRDP LRKSGVGNVFIKNLD SI
Sbjct: 52 GYAYINFQQP--ADAERALDTMNFEVIKGRPIRIMWSQRDPGLRKSGVGNVFIKNLDDSI 109
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIV 181
DNKA+YDTFSAFG+ILSCKV DE G S+GYGFVHFET EAA ++IE +NGMLLN + V
Sbjct: 110 DNKALYDTFSAFGNILSCKVVCDENG-SRGYGFVHFETHEAATRAIETMNGMLLNDRKV 167
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 88/164 (53%), Gaps = 7/164 (4%)
Query: 103 PSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQD-EQGNSKGYGFVHFETE 161
PS + ++++ +L + +Y+ FS G I+S +V +D S GY +++F+
Sbjct: 2 PSGPGYPLASLYVGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDVATRRSLGYAYINFQQP 61
Query: 162 EAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLK 221
A ++++ +N ++ G+ I +++ G + NV+IKN + +++ L
Sbjct: 62 ADAERALDTMNFEVIK------GRPIRIMWSQRDPGLRKSGVGNVFIKNLDDSIDNKALY 115
Query: 222 EMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNG 265
+ F +G I S +V+ ++ SRG+GFV +E+ E A +A++ NG
Sbjct: 116 DTFSAFGNILSCKVVCDENGSRGYGFVHFETHEAATRAIETMNG 159
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 66/137 (48%), Gaps = 20/137 (14%)
Query: 203 FTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDG--KSRGFGFVAYESPEFAEKAV 260
++Y+ + D + L E F P G I S RV + +S G+ ++ ++ P AE+A+
Sbjct: 9 LASLYVGDLHPDVTEAMLYEKFSPAGPIMSIRVCRDVATRRSLGYAYINFQQPADAERAL 68
Query: 261 QAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGV-NLYVKNLDDSIDD 319
N + + G+ + + +Q+ R GV N+++KNLDDSID+
Sbjct: 69 DTMNFEVIKGRPIRIMWSQRDPGL-----------------RKSGVGNVFIKNLDDSIDN 111
Query: 320 ERLRKEFTPFGTITSAK 336
+ L F+ FG I S K
Sbjct: 112 KALYDTFSAFGNILSCK 128
>gi|7673359|gb|AAF66825.1| poly(A)-binding protein [Nicotiana tabacum]
Length = 479
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 93/174 (53%), Positives = 126/174 (72%), Gaps = 3/174 (1%)
Query: 164 ANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEM 223
A +I+K+NGML+N K V+VG F+ ++ERE G F NVY+KN E D+ LK++
Sbjct: 1 AQGAIDKLNGMLMNDKQVYVGHFLRKQERESTTGMTK--FQNVYVKNLSESTTDDGLKKV 58
Query: 224 FEPYGTITSYRVMNN-DGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKA 282
F +G ITS VM + DGKS+ FGF+ +E+ E A KAV++ NGK+ D K YVG+AQKK+
Sbjct: 59 FGEFGNITSAVVMRDADGKSKCFGFINFETAEDAAKAVESLNGKKFDDKEWYVGKAQKKS 118
Query: 283 ERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
ER QELK +FE E +++YQG+NLYVKNLDD+IDDE+L++ F+ FGTITS K
Sbjct: 119 EREQELKSKFEQTAKEAVDKYQGLNLYVKNLDDTIDDEKLKELFSEFGTITSCK 172
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 81/196 (41%), Positives = 117/196 (59%), Gaps = 11/196 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV++KNL +S + + F FG+I S V +D G SK +GF++FET E A K++E +
Sbjct: 40 NVYVKNLSESTTDDGLKKVFGEFGNITSAVVMRDADGKSKCFGFINFETAEDAAKAVESL 99
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLFT----------NVYIKNFGEDFNDEKLK 221
NG + K +VGK + ERE+EL K + N+Y+KN + +DEKLK
Sbjct: 100 NGKKFDDKEWYVGKAQKKSEREQELKSKFEQTAKEAVDKYQGLNLYVKNLDDTIDDEKLK 159
Query: 222 EMFEPYGTITSYRVMNN-DGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
E+F +GTITS +VM + G SRG GFVA+ + E A +A+ NGK + K LYV AQ+
Sbjct: 160 ELFSEFGTITSCKVMRDPSGISRGSGFVAFSTSEEASRALSEMNGKMIVSKPLYVALAQR 219
Query: 281 KAERTQELKRRFEMLK 296
K ER +L+ +F L+
Sbjct: 220 KEERRAKLRAQFSQLR 235
>gi|385281386|gb|AFI57844.1| polyA binding protein, partial [Cocos nucifera]
Length = 352
Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 96/182 (52%), Positives = 126/182 (69%), Gaps = 3/182 (1%)
Query: 156 VHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDF 215
++ + EEAA+ +IEK+NGMLLN K VFVG F+ +++RE + F NV++KN E
Sbjct: 1 IYVDPEEAAHNAIEKLNGMLLNDKKVFVGPFLRKQDRENT--ANSTKFNNVFVKNLSEST 58
Query: 216 NDEKLKEMFEPYGTITSYRVMN-NDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILY 274
++ L E+F YG ITS VM DGKS+ FGFV +E PE A KAV+ NGK+ DGK Y
Sbjct: 59 TEDNLLEIFGEYGNITSAVVMREGDGKSKCFGFVNFEDPEHAAKAVKELNGKKFDGKEWY 118
Query: 275 VGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITS 334
VG+AQKK+ER ELK RFE E ++ QG NLY+KNLDDSI D++LR+ F+ FG+ITS
Sbjct: 119 VGKAQKKSEREMELKGRFEQRMQEAADKNQGANLYLKNLDDSIGDDKLRELFSEFGSITS 178
Query: 335 AK 336
K
Sbjct: 179 CK 180
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 75/196 (38%), Positives = 115/196 (58%), Gaps = 11/196 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NVF+KNL +S + + F +G+I S V ++ G SK +GFV+FE E A K+++++
Sbjct: 48 NVFVKNLSESTTEDNLLEIFGEYGNITSAVVMREGDGKSKCFGFVNFEDPEHAAKAVKEL 107
Query: 172 NGMLLNSKIVFVGKFIPRKEREKEL----------GEKAKLFTNVYIKNFGEDFNDEKLK 221
NG + K +VGK + ERE EL N+Y+KN + D+KL+
Sbjct: 108 NGKKFDGKEWYVGKAQKKSEREMELKGRFEQRMQEAADKNQGANLYLKNLDDSIGDDKLR 167
Query: 222 EMFEPYGTITSYRVMNN-DGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
E+F +G+ITS +VM + +G SRG GFVA++SP+ A KA+ NGK + K LYV AQ+
Sbjct: 168 ELFSEFGSITSCKVMRDPNGVSRGSGFVAFQSPDDASKALAEMNGKMIGSKPLYVALAQR 227
Query: 281 KAERTQELKRRFEMLK 296
K +R L+ +F ++
Sbjct: 228 KEDRRARLQAQFSQMR 243
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 61/96 (63%), Gaps = 4/96 (4%)
Query: 89 LKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQG 148
LKGR + M D K+ N+++KNLD SI + + + FS FGSI SCKV +D G
Sbjct: 132 LKGRFEQRMQEAAD----KNQGANLYLKNLDDSIGDDKLRELFSEFGSITSCKVMRDPNG 187
Query: 149 NSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVG 184
S+G GFV F++ + A+K++ ++NG ++ SK ++V
Sbjct: 188 VSRGSGFVAFQSPDDASKALAEMNGKMIGSKPLYVA 223
>gi|146088402|ref|XP_001466041.1| putative poly(A)-binding protein 3 [Leishmania infantum JPCM5]
gi|134070143|emb|CAM68476.1| putative poly(A)-binding protein 3 [Leishmania infantum JPCM5]
Length = 544
Score = 177 bits (449), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 119/310 (38%), Positives = 162/310 (52%), Gaps = 21/310 (6%)
Query: 32 EGVSRSLSSLIDGNTVKYDWDSGYTCHQLGSGAILVQLGQPYMLDTERALDTMNFDAL-K 90
E ++ S++ +VK D T LG G + Q D E+ +D +N+ +
Sbjct: 24 EAINNLFSTVAPVVSVKVCRDMA-TQRSLGYGYVNFQT----TADAEKVIDALNYTGIAP 78
Query: 91 GRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNS 150
G IR+M+S RDP RKSG+ NVF+K LD +I+ K + F+ G +LSCKVA D GNS
Sbjct: 79 GLQIRVMFSIRDPLQRKSGMNNVFVKKLDTAINAKELQAAFTKCGRVLSCKVALDSAGNS 138
Query: 151 KGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKN 210
KGYGFV FET E A +++ +NG L V V F+ R +RE AK F N+YIKN
Sbjct: 139 KGYGFVQFETAEGAKAALD-MNGSKLGDSEVVVAPFVRRVDREV---MAAKSFRNIYIKN 194
Query: 211 FGEDFNDEKLKEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDG 270
+ +K E +G + S + + F VA+E E A +A+ A N E G
Sbjct: 195 IAAAATEADVKAAAEKFGKVNSLFLSEHAPFPTKFALVAFEEHEAAVQAIAALNESEESG 254
Query: 271 KI-----LYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKE 325
L V RA K+ER +E K K L + G NLYVK+L D I D++LR+
Sbjct: 255 LTEKAAKLVVCRALSKSERDREKK------KAASLYQNHGRNLYVKHLPDDITDDKLREI 308
Query: 326 FTPFGTITSA 335
F PFG ITS
Sbjct: 309 FEPFGKITSC 318
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 106/192 (55%), Gaps = 13/192 (6%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
N++IKN+ + + FG + S +++ +K + V FE EAA ++I +
Sbjct: 189 NIYIKNIAAAATEADVKAAAEKFGKVNSLFLSEHAPFPTK-FALVAFEEHEAAVQAIAAL 247
Query: 172 N-----GMLLNSKIVFVGKFIPRKEREKELGEKAKLFTN----VYIKNFGEDFNDEKLKE 222
N G+ + + V + + + ER++E + A L+ N +Y+K+ +D D+KL+E
Sbjct: 248 NESEESGLTEKAAKLVVCRALSKSERDREKKKAASLYQNHGRNLYVKHLPDDITDDKLRE 307
Query: 223 MFEPYGTITSYRVMNN-DGKSRGFGFVAYESPEFAEKAVQAWNGKEVDG--KILYVGRAQ 279
+FEP+G ITS +M +G +GF FV +E + A A+++ NG+ ++ K LYV A+
Sbjct: 308 IFEPFGKITSCAIMKEPNGTFKGFAFVCFEDRQHASAALRSLNGQPLEHSKKPLYVSHAE 367
Query: 280 KKAERTQELKRR 291
+K R + L++R
Sbjct: 368 QKDMRIRLLQQR 379
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 41/73 (56%)
Query: 104 SLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEA 163
SL ++ N+++K+L I + + + F FG I SC + ++ G KG+ FV FE +
Sbjct: 282 SLYQNHGRNLYVKHLPDDITDDKLREIFEPFGKITSCAIMKEPNGTFKGFAFVCFEDRQH 341
Query: 164 ANKSIEKVNGMLL 176
A+ ++ +NG L
Sbjct: 342 ASAALRSLNGQPL 354
>gi|71745214|ref|XP_827237.1| polyadenylate-binding protein 1 [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
gi|70831402|gb|EAN76907.1| polyadenylate-binding protein 1, putative [Trypanosoma brucei
brucei strain 927/4 GUTat10.1]
gi|261331451|emb|CBH14445.1| PABP1 [Trypanosoma brucei gambiense DAL972]
Length = 566
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 102/267 (38%), Positives = 155/267 (58%), Gaps = 19/267 (7%)
Query: 79 RALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSIL 138
+A++ +NF + + IRIMW QRDP+LR SG GN+F+KNL + +D++ + F FG IL
Sbjct: 77 KAMEELNFKRVGEKCIRIMWQQRDPALRYSGSGNIFVKNLKEEVDSRELSLIFKKFGEIL 136
Query: 139 SCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNG----MLLNSKIVFVGKFIPRKEREK 194
SCKV DE G S+GYGFVHF+ ++AA +IEK+NG + ++V FI R R
Sbjct: 137 SCKVMDDESGKSRGYGFVHFKDDDAAKAAIEKMNGDKEHADADKAALYVANFIRRNAR-- 194
Query: 195 ELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPE 254
L FTNVYIK + + +++ F +G ITS + D R F F +E +
Sbjct: 195 -LAALVANFTNVYIKQLLPTVDKDVIEKFFSKFGGITSAAIC-KDKNGRAFAFCNFEKHD 252
Query: 255 FAEKAVQAWNGKEVD-----GKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLY 309
A KA++A + +EV+ G+ LYV RAQ ++ER L++++ ++ + L G NLY
Sbjct: 253 DAVKAIEASHDQEVEGVTQPGEKLYVQRAQPRSERLIALRQKY--MQCQSL----GNNLY 306
Query: 310 VKNLDDSIDDERLRKEFTPFGTITSAK 336
V+N D ++ L + F +G I S +
Sbjct: 307 VRNFDAEFTEKDLNELFKEYGVIRSCR 333
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 66/183 (36%), Positives = 107/183 (58%), Gaps = 12/183 (6%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIE-- 169
NV+IK L ++D + FS FG I S + +D+ G + + F +FE + A K+IE
Sbjct: 204 NVYIKQLLPTVDKDVIEKFFSKFGGITSAAICKDKNG--RAFAFCNFEKHDDAVKAIEAS 261
Query: 170 ---KVNGMLLNSKIVFVGKFIPRKEREKELGEK----AKLFTNVYIKNFGEDFNDEKLKE 222
+V G+ + ++V + PR ER L +K L N+Y++NF +F ++ L E
Sbjct: 262 HDQEVEGVTQPGEKLYVQRAQPRSERLIALRQKYMQCQSLGNNLYVRNFDAEFTEKDLNE 321
Query: 223 MFEPYGTITSYRVMNN-DGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKK 281
+F+ YG I S RVM + +G SRGFGFV++E+ + A A++ NG+ ++GK L V AQ++
Sbjct: 322 LFKEYGVIRSCRVMTDANGISRGFGFVSFENADQANAALREMNGRMLNGKPLVVNIAQRR 381
Query: 282 AER 284
+R
Sbjct: 382 DQR 384
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 125/232 (53%), Gaps = 25/232 (10%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQD-EQGNSKGYGFVHFETEEAANKSI 168
V ++++ +LD +I+ + D F +G+IL+ +V +D S GYG+V+++ +A+K++
Sbjct: 20 VASLYVGDLDPAINEPQLVDIFKPYGTILNVRVCRDIITQRSLGYGYVNYDDVNSASKAM 79
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
E++N + K + I ++R+ L N+++KN E+ + +L +F+ +G
Sbjct: 80 EELNFKRVGEKCI----RIMWQQRDPALRYSGS--GNIFVKNLKEEVDSRELSLIFKKFG 133
Query: 229 TITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNG----KEVDGKILYVGRAQKKAE 283
I S +VM+++ GKSRG+GFV ++ + A+ A++ NG + D LYV ++
Sbjct: 134 EILSCKVMDDESGKSRGYGFVHFKDDDAAKAAIEKMNGDKEHADADKAALYVANFIRRNA 193
Query: 284 RTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSA 335
R L F N+Y+K L ++D + + K F+ FG ITSA
Sbjct: 194 RLAALVANF-------------TNVYIKQLLPTVDKDVIEKFFSKFGGITSA 232
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 64/136 (47%), Gaps = 20/136 (14%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQ 261
++Y+ + N+ +L ++F+PYGTI + RV + +S G+G+V Y+ A KA++
Sbjct: 21 ASLYVGDLDPAINEPQLVDIFKPYGTILNVRVCRDIITQRSLGYGYVNYDDVNSASKAME 80
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGV-NLYVKNLDDSIDDE 320
N K V K + + Q+ RY G N++VKNL + +D
Sbjct: 81 ELNFKRVGEKCIRIMWQQRDPAL-----------------RYSGSGNIFVKNLKEEVDSR 123
Query: 321 RLRKEFTPFGTITSAK 336
L F FG I S K
Sbjct: 124 ELSLIFKKFGEILSCK 139
>gi|154338582|ref|XP_001565513.1| putative poly(A)-binding protein 3 [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134062565|emb|CAM39007.1| putative poly(A)-binding protein 3 [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 552
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 116/310 (37%), Positives = 161/310 (51%), Gaps = 21/310 (6%)
Query: 32 EGVSRSLSSLIDGNTVKYDWDSGYTCHQLGSGAILVQLGQPYMLDTERALDTMNFDAL-K 90
E ++ SS+ +VK D T LG G + Q D E+ +D +NF +
Sbjct: 24 EAINNLFSSIAPVVSVKVCRDIA-TQRSLGYGYVNFQTTA----DAEKVIDALNFTGIAP 78
Query: 91 GRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNS 150
GR IR+M++ RDP RKSG N+F+K LD ++ KA+ FS G +LSCKVA D +G+S
Sbjct: 79 GRYIRVMFAIRDPLQRKSGANNIFVKKLDAAVSAKALQAAFSRCGRVLSCKVALDSEGHS 138
Query: 151 KGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKN 210
KGYGFV FET + A +++ +NG + V V F+ R +RE AK F N+YIKN
Sbjct: 139 KGYGFVQFETADGAKAALD-MNGAKVGDSEVEVAPFVRRVDRE---AMAAKSFRNIYIKN 194
Query: 211 FGEDFNDEKLKEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDG 270
+ ++ E +G +TS + + F +E E A KA+ N E G
Sbjct: 195 IKATATEVDMRTTLEKFGKVTSLFLAEHAPFLTKFALAVFEEHEAAVKAIAELNESEESG 254
Query: 271 KI-----LYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKE 325
L V RA K+ER +E K K L + G NLYVK+L D I D++LR+
Sbjct: 255 LTEEAVKLVVCRALSKSERDRERK------KTASLYQNHGRNLYVKHLPDDITDDKLREI 308
Query: 326 FTPFGTITSA 335
F PFG ITS
Sbjct: 309 FAPFGKITSC 318
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 107/192 (55%), Gaps = 13/192 (6%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
N++IKN+ + M T FG + S +A+ +K + FE EAA K+I ++
Sbjct: 189 NIYIKNIKATATEVDMRTTLEKFGKVTSLFLAEHAPFLTK-FALAVFEEHEAAVKAIAEL 247
Query: 172 N-----GMLLNSKIVFVGKFIPRKEREKELGEKAKLFTN----VYIKNFGEDFNDEKLKE 222
N G+ + + V + + + ER++E + A L+ N +Y+K+ +D D+KL+E
Sbjct: 248 NESEESGLTEEAVKLVVCRALSKSERDRERKKTASLYQNHGRNLYVKHLPDDITDDKLRE 307
Query: 223 MFEPYGTITSYRVMN-NDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDG--KILYVGRAQ 279
+F P+G ITS +M ++G RGF FV +E + A A++ NG+ ++ K LYV +A+
Sbjct: 308 IFAPFGKITSCAIMRESNGSLRGFAFVCFEDKQHATAAMRELNGRSLESSKKPLYVSQAE 367
Query: 280 KKAERTQELKRR 291
+K R + L++R
Sbjct: 368 QKDMRIRLLQQR 379
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 45/75 (60%)
Query: 104 SLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEA 163
SL ++ N+++K+L I + + + F+ FG I SC + ++ G+ +G+ FV FE ++
Sbjct: 282 SLYQNHGRNLYVKHLPDDITDDKLREIFAPFGKITSCAIMRESNGSLRGFAFVCFEDKQH 341
Query: 164 ANKSIEKVNGMLLNS 178
A ++ ++NG L S
Sbjct: 342 ATAAMRELNGRSLES 356
>gi|402585898|gb|EJW79837.1| Poly(A) binding protein [Wuchereria bancrofti]
Length = 175
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 82/109 (75%), Positives = 92/109 (84%), Gaps = 2/109 (1%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD + G+PIRIMWSQRDPS+R+SG GN+FIKNLDKSI
Sbjct: 60 GYAYVNFQQP--ADAERALDTMNFDMMYGKPIRIMWSQRDPSMRRSGAGNIFIKNLDKSI 117
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
DNKA+YDTFS FG+ILSCKVA DE+ NSKGYGFVHFETEE+A K+IEKV
Sbjct: 118 DNKAIYDTFSMFGNILSCKVANDEESNSKGYGFVHFETEESAQKAIEKV 166
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 85/154 (55%), Gaps = 8/154 (5%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + +++ FS+ G +LS +V +D S GY +V+F+ A +++
Sbjct: 17 MASLYVGDLHPDVTEAMLFEKFSSAGPVLSIRVCRDAITRRSLGYAYVNFQQPADAERAL 76
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N ++ GK I +++ + N++IKN + +++ + + F +G
Sbjct: 77 DTMNFDMM------YGKPIRIMWSQRDPSMRRSGAGNIFIKNLDKSIDNKAIYDTFSMFG 130
Query: 229 TITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQ 261
I S +V N++ S+G+GFV +E+ E A+KA++
Sbjct: 131 NILSCKVANDEESNSKGYGFVHFETEESAQKAIE 164
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 62/135 (45%), Gaps = 18/135 (13%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQ 261
++Y+ + D + L E F G + S RV + +S G+ +V ++ P AE+A+
Sbjct: 18 ASLYVGDLHPDVTEAMLFEKFSSAGPVLSIRVCRDAITRRSLGYAYVNFQQPADAERALD 77
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDER 321
N + GK + + +Q+ + R N+++KNLD SID++
Sbjct: 78 TMNFDMMYGKPIRIMWSQRDPS----------------MRRSGAGNIFIKNLDKSIDNKA 121
Query: 322 LRKEFTPFGTITSAK 336
+ F+ FG I S K
Sbjct: 122 IYDTFSMFGNILSCK 136
>gi|294875884|ref|XP_002767464.1| polyadenylate-binding protein 1-A, putative [Perkinsus marinus ATCC
50983]
gi|239869099|gb|EER00182.1| polyadenylate-binding protein 1-A, putative [Perkinsus marinus ATCC
50983]
Length = 230
Score = 175 bits (444), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 92/172 (53%), Positives = 119/172 (69%), Gaps = 4/172 (2%)
Query: 97 MWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFV 156
MWS RDP+LR+SG GNV++KNLD++IDNKA+YDTFS FG+ILSCKVA G S+G+GFV
Sbjct: 1 MWSHRDPALRRSGAGNVYVKNLDRNIDNKALYDTFSLFGNILSCKVALTPDGKSRGFGFV 60
Query: 157 HFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFN 216
HFE++E+A +I K+NGM + K V+V F +K E+ G K FTNVYIK+ +N
Sbjct: 61 HFESDESAEAAIAKLNGMQIGEKTVYVAPF--KKTAERNDG-TPKNFTNVYIKHIPASWN 117
Query: 217 DEKLKEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEV 268
+EK+KE F +G ITS V D K R F FV Y E A AV+ +GK+V
Sbjct: 118 EEKIKEEFGAFGEITSLAVQ-TDPKGRRFAFVNYAEFEQARAAVEEMDGKDV 168
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/131 (37%), Positives = 75/131 (57%), Gaps = 14/131 (10%)
Query: 205 NVYIKNFGEDFNDEKLKEMFEPYGTITSYRV-MNNDGKSRGFGFVAYESPEFAEKAVQAW 263
NVY+KN + +++ L + F +G I S +V + DGKSRGFGFV +ES E AE A+
Sbjct: 16 NVYVKNLDRNIDNKALYDTFSLFGNILSCKVALTPDGKSRGFGFVHFESDESAEAAIAKL 75
Query: 264 NGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLR 323
NG ++ K +YV +K AER + F N+Y+K++ S ++E+++
Sbjct: 76 NGMQIGEKTVYVAPFKKTAERNDGTPKNF-------------TNVYIKHIPASWNEEKIK 122
Query: 324 KEFTPFGTITS 334
+EF FG ITS
Sbjct: 123 EEFGAFGEITS 133
>gi|71659594|ref|XP_821518.1| polyadenylate-binding protein 1 [Trypanosoma cruzi strain CL
Brener]
gi|70886900|gb|EAN99667.1| polyadenylate-binding protein 1, putative [Trypanosoma cruzi]
Length = 570
Score = 175 bits (444), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 103/268 (38%), Positives = 154/268 (57%), Gaps = 20/268 (7%)
Query: 79 RALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSIL 138
+A++ +NF + + +RIMW QRDP+LR SG GN+F+KNL +D++ + F FG IL
Sbjct: 85 KAMEALNFKRVGDKCMRIMWQQRDPTLRYSGNGNIFVKNLKNEVDSRELSVIFKKFGDIL 144
Query: 139 SCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKI-----VFVGKFIPRKERE 193
SCKV +DE+G S+GYGFVHF+ + AA ++IE +NG ++ ++V FI R R
Sbjct: 145 SCKVMEDEEGKSRGYGFVHFKNDNAAKEAIENMNGEKDHADEEKKMGLYVANFIRRNAR- 203
Query: 194 KELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDGKSRGFGFVAYESP 253
L FTNVYIK + E +++ F +G ITS D R F F +E
Sbjct: 204 --LATLVANFTNVYIKQVLPTVDKEVIEKFFSKFGGITSSATC-KDKNGRVFAFCNFEKH 260
Query: 254 EFAEKAVQAWNGKEVDGKI-----LYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNL 308
E A KA++A + + VDG + LYV RAQ ++ER L++++ ++ + L G NL
Sbjct: 261 EDAVKAIEASHEQFVDGVVPPGEKLYVQRAQPRSERLIALRQKY--MQCQTL----GNNL 314
Query: 309 YVKNLDDSIDDERLRKEFTPFGTITSAK 336
YV+N D +E L + F +G I S +
Sbjct: 315 YVRNFDPEFTEENLHELFKEYGVIRSCR 342
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/205 (35%), Positives = 117/205 (57%), Gaps = 19/205 (9%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEK- 170
NV+IK + ++D + + FS FG I S +D+ G + + F +FE E A K+IE
Sbjct: 213 NVYIKQVLPTVDKEVIEKFFSKFGGITSSATCKDKNG--RVFAFCNFEKHEDAVKAIEAS 270
Query: 171 ----VNGMLLNSKIVFVGKFIPRKEREKELGEK----AKLFTNVYIKNFGEDFNDEKLKE 222
V+G++ + ++V + PR ER L +K L N+Y++NF +F +E L E
Sbjct: 271 HEQFVDGVVPPGEKLYVQRAQPRSERLIALRQKYMQCQTLGNNLYVRNFDPEFTEENLHE 330
Query: 223 MFEPYGTITSYRVMNN-DGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKK 281
+F+ YG I S RVM + +G SRGFGFV++E+ + A A++ NG+ ++GK L V AQ++
Sbjct: 331 LFKEYGVIRSCRVMTDANGNSRGFGFVSFENADQANAALREMNGRMLNGKPLIVNIAQRR 390
Query: 282 AERTQELKRRFEMLKIERLNRYQGV 306
+RF ML+++ R Q +
Sbjct: 391 -------DQRFMMLRLQFQQRLQAM 408
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 121/233 (51%), Gaps = 26/233 (11%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
V ++++ +LD + + + F FG+IL+ +V +D S GYG+V+F + ++A K++
Sbjct: 28 VASLYVGDLDPVVTEPHLVELFKPFGTILNVRVCRDIITQRSLGYGYVNFNSHDSAAKAM 87
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
E +N + K + I ++R+ L N+++KN + + +L +F+ +G
Sbjct: 88 EALNFKRVGDKCM----RIMWQQRDPTLRYSGN--GNIFVKNLKNEVDSRELSVIFKKFG 141
Query: 229 TITSYRVM-NNDGKSRGFGFVAYESPEFAEKAVQAWNGK-----EVDGKILYVGRAQKKA 282
I S +VM + +GKSRG+GFV +++ A++A++ NG+ E LYV ++
Sbjct: 142 DILSCKVMEDEEGKSRGYGFVHFKNDNAAKEAIENMNGEKDHADEEKKMGLYVANFIRRN 201
Query: 283 ERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSA 335
R L F N+Y+K + ++D E + K F+ FG ITS+
Sbjct: 202 ARLATLVANF-------------TNVYIKQVLPTVDKEVIEKFFSKFGGITSS 241
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 66/141 (46%), Gaps = 20/141 (14%)
Query: 199 KAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFA 256
KA ++Y+ + + L E+F+P+GTI + RV + +S G+G+V + S + A
Sbjct: 24 KALQVASLYVGDLDPVVTEPHLVELFKPFGTILNVRVCRDIITQRSLGYGYVNFNSHDSA 83
Query: 257 EKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGV-NLYVKNLDD 315
KA++A N K V K + + Q+ RY G N++VKNL +
Sbjct: 84 AKAMEALNFKRVGDKCMRIMWQQRDPTL-----------------RYSGNGNIFVKNLKN 126
Query: 316 SIDDERLRKEFTPFGTITSAK 336
+D L F FG I S K
Sbjct: 127 EVDSRELSVIFKKFGDILSCK 147
>gi|407408437|gb|EKF31876.1| poly(A)-binding protein, putative,polyadenylate-binding protein,
putative [Trypanosoma cruzi marinkellei]
Length = 569
Score = 175 bits (443), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 104/268 (38%), Positives = 154/268 (57%), Gaps = 20/268 (7%)
Query: 79 RALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSIL 138
+A++ +NF + + +RIMW QRDP+LR SG GNVF+KNL +D++ + F FG IL
Sbjct: 78 KAMEALNFKRVGDKCMRIMWQQRDPALRYSGNGNVFVKNLKNEVDSRELGAIFKKFGDIL 137
Query: 139 SCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKI-----VFVGKFIPRKERE 193
SCKV +DE+G S+GYGFVHF+ + AA ++IE +NG ++ ++V FI R R
Sbjct: 138 SCKVMEDEEGKSRGYGFVHFKNDNAAKEAIENMNGDKDHADEEKKMGLYVANFIRRNAR- 196
Query: 194 KELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDGKSRGFGFVAYESP 253
L FTNVYIK + E +++ F +G ITS D R F F +E
Sbjct: 197 --LATLVANFTNVYIKQVLPTVDKEVIEKFFSRFGGITSSATC-KDKNGRVFAFCNFEKH 253
Query: 254 EFAEKAVQAWNGKEVDGKI-----LYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNL 308
E A KA++A + + VDG + LYV RAQ ++ER L++++ ++ + L G NL
Sbjct: 254 EDAVKAIEASHEQFVDGVVPPGEKLYVQRAQPRSERLIALRQKY--MQCQTL----GNNL 307
Query: 309 YVKNLDDSIDDERLRKEFTPFGTITSAK 336
YV+N D +E L + F +G I S +
Sbjct: 308 YVRNFDPEFTEENLHELFKEYGVIRSCR 335
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/205 (34%), Positives = 116/205 (56%), Gaps = 19/205 (9%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEK- 170
NV+IK + ++D + + FS FG I S +D+ G + + F +FE E A K+IE
Sbjct: 206 NVYIKQVLPTVDKEVIEKFFSRFGGITSSATCKDKNG--RVFAFCNFEKHEDAVKAIEAS 263
Query: 171 ----VNGMLLNSKIVFVGKFIPRKEREKELGEK----AKLFTNVYIKNFGEDFNDEKLKE 222
V+G++ + ++V + PR ER L +K L N+Y++NF +F +E L E
Sbjct: 264 HEQFVDGVVPPGEKLYVQRAQPRSERLIALRQKYMQCQTLGNNLYVRNFDPEFTEENLHE 323
Query: 223 MFEPYGTITSYRVMNN-DGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKK 281
+F+ YG I S RVM + +G SRGFGFV++ + + A A++ NG+ ++GK L V AQ++
Sbjct: 324 LFKEYGVIRSCRVMTDANGNSRGFGFVSFGNADQANAALREMNGRMLNGKPLIVNIAQRR 383
Query: 282 AERTQELKRRFEMLKIERLNRYQGV 306
+ RF ML+++ R Q +
Sbjct: 384 DQ-------RFMMLRLQFQQRLQAM 401
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 119/233 (51%), Gaps = 26/233 (11%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQD-EQGNSKGYGFVHFETEEAANKSI 168
V ++++ +LD + + + F FG+IL+ +V +D S GYG+++F ++A K++
Sbjct: 21 VASLYVGDLDPIVTEPHLVELFKPFGTILNVRVCRDIITQRSLGYGYINFNNHDSAAKAM 80
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
E +N + K + I ++R+ L NV++KN + + +L +F+ +G
Sbjct: 81 EALNFKRVGDKCM----RIMWQQRDPALRYSGN--GNVFVKNLKNEVDSRELGAIFKKFG 134
Query: 229 TITSYRVM-NNDGKSRGFGFVAYESPEFAEKAVQAWNG-----KEVDGKILYVGRAQKKA 282
I S +VM + +GKSRG+GFV +++ A++A++ NG E LYV ++
Sbjct: 135 DILSCKVMEDEEGKSRGYGFVHFKNDNAAKEAIENMNGDKDHADEEKKMGLYVANFIRRN 194
Query: 283 ERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSA 335
R L F N+Y+K + ++D E + K F+ FG ITS+
Sbjct: 195 ARLATLVANF-------------TNVYIKQVLPTVDKEVIEKFFSRFGGITSS 234
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 66/141 (46%), Gaps = 20/141 (14%)
Query: 199 KAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFA 256
KA ++Y+ + + L E+F+P+GTI + RV + +S G+G++ + + + A
Sbjct: 17 KALQVASLYVGDLDPIVTEPHLVELFKPFGTILNVRVCRDIITQRSLGYGYINFNNHDSA 76
Query: 257 EKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGV-NLYVKNLDD 315
KA++A N K V K + + Q+ RY G N++VKNL +
Sbjct: 77 AKAMEALNFKRVGDKCMRIMWQQRDPAL-----------------RYSGNGNVFVKNLKN 119
Query: 316 SIDDERLRKEFTPFGTITSAK 336
+D L F FG I S K
Sbjct: 120 EVDSRELGAIFKKFGDILSCK 140
>gi|342183460|emb|CCC92940.1| putative polyadenylate-binding protein 1 [Trypanosoma congolense
IL3000]
Length = 552
Score = 174 bits (442), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 103/267 (38%), Positives = 152/267 (56%), Gaps = 19/267 (7%)
Query: 79 RALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSIL 138
+A++ MNF + + IRIMW QRDP+LR SG GNVF+KNL +D++ + F FG IL
Sbjct: 77 KAMEEMNFKRVGEKCIRIMWQQRDPALRYSGNGNVFVKNLKGEVDSRELSLIFKKFGEIL 136
Query: 139 SCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNS----KIVFVGKFIPRKEREK 194
SCKV DE GNS+GYGFVHF+ + AA +IE +NG+ + ++V FI R R
Sbjct: 137 SCKVMDDESGNSRGYGFVHFKDDNAAKSAIESMNGVTEYADEKKTALYVANFIRRNAR-- 194
Query: 195 ELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPE 254
L FTNVYIK + +++ F +G ITS + D R F F +E +
Sbjct: 195 -LAALVANFTNVYIKQILPTVDKAIIEKFFSKFGGITSAAIC-KDKNGRAFAFCNFEKHD 252
Query: 255 FAEKAVQAWNGKEVD-----GKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLY 309
A KA++ ++ EV+ G+ LYV RAQ ++ER L++++ ++ + L G NLY
Sbjct: 253 DAVKAIEEFHDHEVEGVTQPGEKLYVQRAQPRSERLIALRQKY--MQCQSL----GNNLY 306
Query: 310 VKNLDDSIDDERLRKEFTPFGTITSAK 336
V+N D ++ L + F +G I S +
Sbjct: 307 VRNFDPEFTEKDLNELFKEYGVIRSCR 333
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 64/183 (34%), Positives = 107/183 (58%), Gaps = 12/183 (6%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEK- 170
NV+IK + ++D + FS FG I S + +D+ G + + F +FE + A K+IE+
Sbjct: 204 NVYIKQILPTVDKAIIEKFFSKFGGITSAAICKDKNG--RAFAFCNFEKHDDAVKAIEEF 261
Query: 171 ----VNGMLLNSKIVFVGKFIPRKEREKELGEK----AKLFTNVYIKNFGEDFNDEKLKE 222
V G+ + ++V + PR ER L +K L N+Y++NF +F ++ L E
Sbjct: 262 HDHEVEGVTQPGEKLYVQRAQPRSERLIALRQKYMQCQSLGNNLYVRNFDPEFTEKDLNE 321
Query: 223 MFEPYGTITSYRVMNN-DGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKK 281
+F+ YG I S RVM + +G SRGFGFV++E+ + A A++ +G+ ++GK L V AQ++
Sbjct: 322 LFKEYGVIRSCRVMTDANGVSRGFGFVSFENADQANAALREMSGRMLNGKPLVVNIAQRR 381
Query: 282 AER 284
+R
Sbjct: 382 DQR 384
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 121/232 (52%), Gaps = 25/232 (10%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQD-EQGNSKGYGFVHFETEEAANKSI 168
V ++++ +LD +I + + F +G+IL+ +V +D S GYG+V+++ +A K++
Sbjct: 20 VASLYVGDLDPAISEPQLVEIFRPYGTILNVRVCRDIITQRSLGYGYVNYDNANSATKAM 79
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
E++N + K + I ++R+ L NV++KN + + +L +F+ +G
Sbjct: 80 EEMNFKRVGEKCI----RIMWQQRDPALRYSGN--GNVFVKNLKGEVDSRELSLIFKKFG 133
Query: 229 TITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNG--KEVDGK--ILYVGRAQKKAE 283
I S +VM+++ G SRG+GFV ++ A+ A+++ NG + D K LYV ++
Sbjct: 134 EILSCKVMDDESGNSRGYGFVHFKDDNAAKSAIESMNGVTEYADEKKTALYVANFIRRNA 193
Query: 284 RTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSA 335
R L F N+Y+K + ++D + K F+ FG ITSA
Sbjct: 194 RLAALVANF-------------TNVYIKQILPTVDKAIIEKFFSKFGGITSA 232
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 63/136 (46%), Gaps = 20/136 (14%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQ 261
++Y+ + ++ +L E+F PYGTI + RV + +S G+G+V Y++ A KA++
Sbjct: 21 ASLYVGDLDPAISEPQLVEIFRPYGTILNVRVCRDIITQRSLGYGYVNYDNANSATKAME 80
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGV-NLYVKNLDDSIDDE 320
N K V K + + Q+ RY G N++VKNL +D
Sbjct: 81 EMNFKRVGEKCIRIMWQQRDPAL-----------------RYSGNGNVFVKNLKGEVDSR 123
Query: 321 RLRKEFTPFGTITSAK 336
L F FG I S K
Sbjct: 124 ELSLIFKKFGEILSCK 139
>gi|119627672|gb|EAX07267.1| poly(A) binding protein, cytoplasmic 4 (inducible form), isoform
CRA_g [Homo sapiens]
Length = 338
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 88/147 (59%), Positives = 107/147 (72%), Gaps = 10/147 (6%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD +KG+PIRIMWSQRDPSLRKSGVGNVFIKNLDKSI
Sbjct: 53 GYAYVNFQQP--ADAERALDTMNFDVIKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 110
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF 182
DNKA+YDTFSAFG+ILSCKV E G SKG+GFV F + E A K++ ++NG ++ SK ++
Sbjct: 111 DNKALYDTFSAFGNILSCKVML-EDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLY 169
Query: 183 VGKFIPRKEREKELGEKAKLFTNVYIK 209
V ++ER+ L TN Y++
Sbjct: 170 VALAQRKEERKAHL-------TNQYMQ 189
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 101/184 (54%), Gaps = 7/184 (3%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + +Y+ FS G +LS +V +D S GY +V+F+ A +++
Sbjct: 10 MASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERAL 69
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+ +N ++ K + I +R+ L + NV+IKN + +++ L + F +G
Sbjct: 70 DTMNFDVIKGKPIR----IMWSQRDPSLRKSG--VGNVFIKNLDKSIDNKALYDTFSAFG 123
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S +VM DG+S+GFGFV + SPE A KAV NG+ V K LYV AQ+K ER L
Sbjct: 124 NILSCKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAHL 183
Query: 289 KRRF 292
++
Sbjct: 184 TNQY 187
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 64/137 (46%), Gaps = 20/137 (14%)
Query: 203 FTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAV 260
++Y+ + D + L E F P G + S RV + +S G+ +V ++ P AE+A+
Sbjct: 10 MASLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERAL 69
Query: 261 QAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGV-NLYVKNLDDSIDD 319
N + GK + + +Q+ R GV N+++KNLD SID+
Sbjct: 70 DTMNFDVIKGKPIRIMWSQRDPSL-----------------RKSGVGNVFIKNLDKSIDN 112
Query: 320 ERLRKEFTPFGTITSAK 336
+ L F+ FG I S K
Sbjct: 113 KALYDTFSAFGNILSCK 129
>gi|190405722|gb|EDV08989.1| poly(A) binding protein [Saccharomyces cerevisiae RM11-1a]
Length = 262
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 76/131 (58%), Positives = 99/131 (75%)
Query: 79 RALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSIL 138
+A++ +N+ +KGR RIMWSQRDPSLRK G GN+FIKNL IDNKA+YDTFS FG IL
Sbjct: 94 KAIEQLNYTPIKGRLCRIMWSQRDPSLRKKGSGNIFIKNLHPDIDNKALYDTFSVFGDIL 153
Query: 139 SCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGE 198
S K+A DE G SKG+GFVHFE E AA ++I+ +NGMLLN + ++V + RKER+ +L E
Sbjct: 154 SSKIATDENGKSKGFGFVHFEEEGAAKEAIDALNGMLLNGQEIYVAPHLSRKERDSQLEE 213
Query: 199 KAKLFTNVYIK 209
+TN+Y+K
Sbjct: 214 TKAHYTNLYVK 224
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 107/203 (52%), Gaps = 18/203 (8%)
Query: 111 GNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSIE 169
++++ +L+ S+ +YD FS GS+ S +V +D S GY +V+F EA K+IE
Sbjct: 38 ASLYVGDLEPSVSEAHLYDIFSPIGSVSSIRVCRDAITKTSLGYAYVNFNDHEAGRKAIE 97
Query: 170 KVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGT 229
++N + ++ I +R+ L +K N++IKN D +++ L + F +G
Sbjct: 98 QLNYTPIKGRLCR----IMWSQRDPSLRKKGS--GNIFIKNLHPDIDNKALYDTFSVFGD 151
Query: 230 ITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S ++ ++ GKS+GFGFV +E A++A+ A NG ++G+ +YV + ER +L
Sbjct: 152 ILSSKIATDENGKSKGFGFVHFEEEGAAKEAIDALNGMLLNGQEIYVAPHLSRKERDSQL 211
Query: 289 KRRFEMLKIERLNRYQGVNLYVK 311
+ + NLYVK
Sbjct: 212 EE----------TKAHYTNLYVK 224
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/135 (22%), Positives = 62/135 (45%), Gaps = 18/135 (13%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQ 261
++Y+ + ++ L ++F P G+++S RV + S G+ +V + E KA++
Sbjct: 38 ASLYVGDLEPSVSEAHLYDIFSPIGSVSSIRVCRDAITKTSLGYAYVNFNDHEAGRKAIE 97
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDER 321
N + G++ + +Q+ L + N+++KNL ID++
Sbjct: 98 QLNYTPIKGRLCRIMWSQRDPS----------------LRKKGSGNIFIKNLHPDIDNKA 141
Query: 322 LRKEFTPFGTITSAK 336
L F+ FG I S+K
Sbjct: 142 LYDTFSVFGDILSSK 156
>gi|426228299|ref|XP_004008250.1| PREDICTED: polyadenylate-binding protein 1-like [Ovis aries]
Length = 551
Score = 165 bits (417), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 86/173 (49%), Positives = 111/173 (64%), Gaps = 25/173 (14%)
Query: 145 DEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFT 204
+++ SKGYGFVHFET+EAA ++IEK+NGMLLN + VFVG+F RKERE ELG +AK FT
Sbjct: 86 NKKNGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFT 145
Query: 205 NVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND------------------------- 239
NVYIKNFGED +DE+LK++F +G S +VM ++
Sbjct: 146 NVYIKNFGEDMDDERLKDLFGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKVMMEG 205
Query: 240 GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRF 292
G+S+GFGFV + SPE A KAV NG+ V K LYV AQ+K ER L ++
Sbjct: 206 GRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQRKEERQAHLTNQY 258
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 76/166 (45%), Gaps = 37/166 (22%)
Query: 77 TERALDTMNFDALKGRPIRI----MWSQRDPSL--RKSGVGNVFIKNLDKSIDNKAMYDT 130
ERA++ MN L R + + +R+ L R NV+IKN + +D++ + D
Sbjct: 105 AERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKDL 164
Query: 131 FSAFGSILSCKVAQDEQGNSKGYGFVHFE------------------------TEEAANK 166
F FG LS KV DE G SKG+GFV FE + E A K
Sbjct: 165 FGKFGPALSVKVMTDESGKSKGFGFVSFERHEDAQKVMMEGGRSKGFGFVCFSSPEEATK 224
Query: 167 SIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFG 212
++ ++NG ++ +K ++V ++ER+ L TN Y++
Sbjct: 225 AVTEMNGRIVATKPLYVALAQRKEERQAHL-------TNQYMQRMA 263
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 55/100 (55%), Gaps = 10/100 (10%)
Query: 237 NNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLK 296
N S+G+GFV +E+ E AE+A++ NG ++ + ++VGR + + ER EL R +
Sbjct: 86 NKKNGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEF- 144
Query: 297 IERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
N+Y+KN + +DDERL+ F FG S K
Sbjct: 145 ---------TNVYIKNFGEDMDDERLKDLFGKFGPALSVK 175
>gi|400260942|pdb|4F25|A Chain A, Crystal Structure Of The Second Rrm Domain Of Human Pabpc1
At Ph 6.0
gi|400260943|pdb|4F26|A Chain A, Crystal Structure Of The Second Rrm Domain Of Human Pabpc1
A Ph 9.0
Length = 115
Score = 165 bits (417), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 81/104 (77%), Positives = 91/104 (87%), Gaps = 1/104 (0%)
Query: 109 GVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSI 168
G GN+FIKNLDKSIDNKA+YDTFSAFG+ILSCKV DE G SKGYGFVHFET+EAA ++I
Sbjct: 4 GSGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETQEAAERAI 62
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFG 212
EK+NGMLLN + VFVG+F RKERE ELG +AK FTNVYIKNFG
Sbjct: 63 EKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFG 106
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 63/109 (57%), Gaps = 10/109 (9%)
Query: 205 NVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWN 264
N++IKN + +++ L + F +G I S +V+ ++ S+G+GFV +E+ E AE+A++ N
Sbjct: 7 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMN 66
Query: 265 GKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNL 313
G ++ + ++VGR + + ER EL R + N+Y+KN
Sbjct: 67 GMLLNDRKVFVGRFKSRKEREAELGARAKEF----------TNVYIKNF 105
>gi|387594015|gb|EIJ89039.1| hypothetical protein NEQG_00858 [Nematocida parisii ERTm3]
gi|387595783|gb|EIJ93406.1| hypothetical protein NEPG_01748 [Nematocida parisii ERTm1]
Length = 512
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 92/263 (34%), Positives = 149/263 (56%), Gaps = 11/263 (4%)
Query: 80 ALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILS 139
A++T NF +L G IR+M ++ S+ + GN+ IKNL K DN+ +YDTF FG ILS
Sbjct: 77 AIETFNFYSLHGSQIRVMPFNKE-SVVGNREGNIVIKNLPKETDNQTLYDTFIVFGPILS 135
Query: 140 CKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEK 199
CKV ++ G G++ ++ + A +I+ +N ++LN K + + IP +REK+
Sbjct: 136 CKVVKNNLSECTGVGYIQYKDPKVAEVAIQMINKIVLNGKKLCATQCIPNDKREKKRENV 195
Query: 200 AKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAEK 258
AK+FTN+Y+KNF +E+++ + YG +TS+ D G+ RGF F Y++ E A
Sbjct: 196 AKIFTNIYVKNFPAGITEEEIEAKLKEYGELTSFLAPRTDSGEMRGFAFANYQTHEMAAA 255
Query: 259 AVQAWNGKEVDG-----KILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNL 313
A++A + K G + LYV RA+ K ER +E+ F + R N+Y+ NL
Sbjct: 256 AIEALHDKPFPGYPEGTENLYVQRAKLKNERVEEMLEYFSQVPEHERRR----NIYITNL 311
Query: 314 DDSIDDERLRKEFTPFGTITSAK 336
+++E + K F+ +G I + K
Sbjct: 312 PGELNEEDVVKYFSKYGPIVTYK 334
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 86/176 (48%), Gaps = 11/176 (6%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
N+++KN I + + +G + S + + G +G+ F +++T E A +IE +
Sbjct: 201 NIYVKNFPAGITEEEIEAKLKEYGELTSFLAPRTDSGEMRGFAFANYQTHEMAAAAIEAL 260
Query: 172 N-----GMLLNSKIVFVGKFIPRKEREKELGE------KAKLFTNVYIKNFGEDFNDEKL 220
+ G ++ ++V + + ER +E+ E + + N+YI N + N+E +
Sbjct: 261 HDKPFPGYPEGTENLYVQRAKLKNERVEEMLEYFSQVPEHERRRNIYITNLPGELNEEDV 320
Query: 221 KEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVG 276
+ F YG I +Y++ + +R +G+V Y+ E A KAV+ N E + L V
Sbjct: 321 VKYFSKYGPIVTYKLGTDAKNNRSYGYVFYQKAEDAAKAVELANKSEYCEQTLDVA 376
>gi|405963265|gb|EKC28854.1| Polyadenylate-binding protein 1 [Crassostrea gigas]
Length = 172
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 76/109 (69%), Positives = 91/109 (83%), Gaps = 1/109 (0%)
Query: 73 YMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFS 132
++ D E AL+TMN+D +KG+PIRI W QRDPS RKSGVGNVFIKNLDKSIDNKA+YDTFS
Sbjct: 65 HLEDAETALNTMNYDTIKGQPIRITWYQRDPSPRKSGVGNVFIKNLDKSIDNKALYDTFS 124
Query: 133 AFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIV 181
AFG+ILSCK+ DE G +GYGFVHFE EE+A +IE+VNG +L+ K V
Sbjct: 125 AFGNILSCKIVCDEHG-FRGYGFVHFEKEESATIAIERVNGTMLHGKKV 172
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 87/176 (49%), Gaps = 7/176 (3%)
Query: 97 MWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGF 155
M+S P+ + ++++ +L + +Y+ FS G +LS +V + S GY +
Sbjct: 1 MFSLVFPAGPIHPMTSLYVGDLHPDVTEDMLYEKFSTAGPVLSIRVCRVLFTRRSLGYAY 60
Query: 156 VHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDF 215
V F+ E A ++ +N + + + + + +++ + NV+IKN +
Sbjct: 61 VDFKHLEDAETALNTMNYDTIKGQPIRITWY------QRDPSPRKSGVGNVFIKNLDKSI 114
Query: 216 NDEKLKEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGK 271
+++ L + F +G I S +++ ++ RG+GFV +E E A A++ NG + GK
Sbjct: 115 DNKALYDTFSAFGNILSCKIVCDEHGFRGYGFVHFEKEESATIAIERVNGTMLHGK 170
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 62/136 (45%), Gaps = 20/136 (14%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQ 261
T++Y+ + D ++ L E F G + S RV +S G+ +V ++ E AE A+
Sbjct: 15 TSLYVGDLHPDVTEDMLYEKFSTAGPVLSIRVCRVLFTRRSLGYAYVDFKHLEDAETALN 74
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGV-NLYVKNLDDSIDDE 320
N + G+ + + Q+ R GV N+++KNLD SID++
Sbjct: 75 TMNYDTIKGQPIRITWYQRDPS-----------------PRKSGVGNVFIKNLDKSIDNK 117
Query: 321 RLRKEFTPFGTITSAK 336
L F+ FG I S K
Sbjct: 118 ALYDTFSAFGNILSCK 133
>gi|340056243|emb|CCC50573.1| putative polyadenylate-binding protein 1 [Trypanosoma vivax Y486]
Length = 482
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 95/249 (38%), Positives = 140/249 (56%), Gaps = 19/249 (7%)
Query: 97 MWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFV 156
MW QRDP+LR SG GN+F+KNL +D++ + F FG ILSCKV DE G S+GYGFV
Sbjct: 1 MWQQRDPALRYSGNGNIFVKNLKGEVDSRELSVIFKRFGEILSCKVMSDEGGRSRGYGFV 60
Query: 157 HFETEEAANKSIEKVNGMLLNS----KIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFG 212
HF+ + AA +IE +NG ++ ++V FI R R L FTNVYIK
Sbjct: 61 HFKDDTAAKNAIESMNGDKEHADAAKAALYVANFIRRNAR---LAALVANFTNVYIKQLL 117
Query: 213 EDFNDEKLKEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVD--- 269
N + +++ F +G ITS D R F F +E + A KA++A++ + ++
Sbjct: 118 PTVNKDTIEKFFSKFGGITSAATC-KDKNGRAFAFCNFEKHDDAVKAIEAFHDQVIEGVT 176
Query: 270 --GKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFT 327
G+ LYV RAQ ++ER L++++ ++ + L G NLYV+N D ++ L F
Sbjct: 177 PPGEKLYVQRAQPRSERLIALRQKY--MQCQSL----GNNLYVRNFDVEFSEKDLHVLFE 230
Query: 328 PFGTITSAK 336
+GTI S +
Sbjct: 231 EYGTIRSCR 239
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 71/212 (33%), Positives = 118/212 (55%), Gaps = 12/212 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEK- 170
NV+IK L +++ + FS FG I S +D+ G + + F +FE + A K+IE
Sbjct: 110 NVYIKQLLPTVNKDTIEKFFSKFGGITSAATCKDKNG--RAFAFCNFEKHDDAVKAIEAF 167
Query: 171 ----VNGMLLNSKIVFVGKFIPRKEREKELGEK----AKLFTNVYIKNFGEDFNDEKLKE 222
+ G+ + ++V + PR ER L +K L N+Y++NF +F+++ L
Sbjct: 168 HDQVIEGVTPPGEKLYVQRAQPRSERLIALRQKYMQCQSLGNNLYVRNFDVEFSEKDLHV 227
Query: 223 MFEPYGTITSYRVMNN-DGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKK 281
+FE YGTI S RVM + +G SRGFGFV++E+ + A A++ NG+ ++GK L V AQ++
Sbjct: 228 LFEEYGTIRSCRVMTDANGNSRGFGFVSFENADQANAALREMNGRMLNGKPLIVNIAQRR 287
Query: 282 AERTQELKRRFEMLKIERLNRYQGVNLYVKNL 313
+R L+ +F+ L + ++L KN
Sbjct: 288 DQRFMMLRVQFQQRMQMMLRHMRPMSLGGKNF 319
>gi|440857933|gb|ELR44433.1| hypothetical protein M91_06292, partial [Bos grunniens mutus]
Length = 149
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 75/111 (67%), Positives = 93/111 (83%), Gaps = 3/111 (2%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP +D +RAL+T+NFD +KGRP+RIMWSQRDPSLRKSGVGNVFIKNL K+I
Sbjct: 42 GYAYVNYQQP--VDAKRALETLNFDVIKGRPVRIMWSQRDPSLRKSGVGNVFIKNLGKTI 99
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNG 173
DNKA+Y+ FSAFG+ILSCKVA DE+G KGYGFVHF+ +E+A ++I+ +NG
Sbjct: 100 DNKALYNIFSAFGNILSCKVACDEKG-PKGYGFVHFQKQESAERAIDAMNG 149
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 85/155 (54%), Gaps = 7/155 (4%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSIEK 170
++++ +L + +Y+ FS G ILS ++ +D+ S GY +V+++ A +++E
Sbjct: 1 SLYVGDLHPEVTEAMLYEKFSPAGPILSIRLCRDKITRRSLGYAYVNYQQPVDAKRALET 60
Query: 171 VNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTI 230
+N ++ + V I +R+ L + NV+IKN G+ +++ L +F +G I
Sbjct: 61 LNFDVIKGRPVR----IMWSQRDPSLRKSG--VGNVFIKNLGKTIDNKALYNIFSAFGNI 114
Query: 231 TSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNG 265
S +V ++ +G+GFV ++ E AE+A+ A NG
Sbjct: 115 LSCKVACDEKGPKGYGFVHFQKQESAERAIDAMNG 149
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 64/135 (47%), Gaps = 20/135 (14%)
Query: 205 NVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQA 262
++Y+ + + + L E F P G I S R+ + +S G+ +V Y+ P A++A++
Sbjct: 1 SLYVGDLHPEVTEAMLYEKFSPAGPILSIRLCRDKITRRSLGYAYVNYQQPVDAKRALET 60
Query: 263 WNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGV-NLYVKNLDDSIDDER 321
N + G+ + + +Q+ R GV N+++KNL +ID++
Sbjct: 61 LNFDVIKGRPVRIMWSQRDPSL-----------------RKSGVGNVFIKNLGKTIDNKA 103
Query: 322 LRKEFTPFGTITSAK 336
L F+ FG I S K
Sbjct: 104 LYNIFSAFGNILSCK 118
>gi|71745456|ref|XP_827358.1| poly(A)-binding protein 1 [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|4104919|gb|AAD13337.1| poly(A) binding protein I [Trypanosoma brucei]
gi|70831523|gb|EAN77028.1| poly(A)-binding protein 1 [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|261331563|emb|CBH14557.1| PABP2 [Trypanosoma brucei gambiense DAL972]
Length = 555
Score = 159 bits (402), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 101/264 (38%), Positives = 158/264 (59%), Gaps = 14/264 (5%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D E+ALD L + IRI QRDPS R+SGV N+ +K L ++D A+ + FS +G
Sbjct: 62 DAEKALDQAGVK-LGTKHIRIAKIQRDPSKRRSGVTNIIVKKLPPTVDTYALKEMFSKYG 120
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ + +A DE+G S+GY + +E EE+A ++ ++NG+ ++ + V ++ P RE++
Sbjct: 121 RLTAIGLATDEKGESRGYARISYEKEESAVDAVRELNGVSIDDCAITVERYQPH-HREEQ 179
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDGKSR-GFGFVAYESPE 254
L K +TN+Y+KN +DEKLKE+F P+G +TS +V + G+ GFG+VAY + E
Sbjct: 180 L----KQYTNLYVKNLDPSVDDEKLKEVFSPFGEVTSAKVRDLAGRPTVGFGYVAYATHE 235
Query: 255 FAEKAVQAWNGKEV----DGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYV 310
A KAV+ + KE +G L V R + + ER +E +R + ++ ++Y NLYV
Sbjct: 236 AAAKAVEELDDKESPLAKEGMKLSVCRFRSREERKRERERLRRERQ-QQHSKYP--NLYV 292
Query: 311 KNLDDSIDDERLRKEFTPFGTITS 334
KN DD++ ERL+ F PFG S
Sbjct: 293 KNFDDTVTSERLKALFDPFGETVS 316
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 73/227 (32%), Positives = 123/227 (54%), Gaps = 24/227 (10%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSIEK 170
++++ LD +++ + +YD F G + S +V D S GYG+V+F+ A K++++
Sbjct: 10 SIWVGGLDPNLNEQKLYDHFVRVGPVASVRVCVDSVTQKSLGYGYVNFQNPADAEKALDQ 69
Query: 171 VNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTI 230
G+ L +K + + K +++ ++ TN+ +K + LKEMF YG +
Sbjct: 70 A-GVKLGTKHIRIAKI------QRDPSKRRSGVTNIIVKKLPPTVDTYALKEMFSKYGRL 122
Query: 231 TSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELK 289
T+ + ++ G+SRG+ ++YE E A AV+ NG +D + V R Q R ++LK
Sbjct: 123 TAIGLATDEKGESRGYARISYEKEESAVDAVRELNGVSIDDCAITVERYQPH-HREEQLK 181
Query: 290 RRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
Q NLYVKNLD S+DDE+L++ F+PFG +TSAK
Sbjct: 182 --------------QYTNLYVKNLDPSVDDEKLKEVFSPFGEVTSAK 214
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 117/229 (51%), Gaps = 16/229 (6%)
Query: 75 LDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAF 134
+D R L+ ++ D R R+ L++ N+++KNLD S+D++ + + FS F
Sbjct: 150 VDAVRELNGVSIDDCAITVERYQPHHREEQLKQ--YTNLYVKNLDPSVDDEKLKEVFSPF 207
Query: 135 GSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVN---------GMLLN--SKIVFV 183
G + S KV + G+G+V + T EAA K++E+++ GM L+
Sbjct: 208 GEVTSAKVRDLAGRPTVGFGYVAYATHEAAAKAVEELDDKESPLAKEGMKLSVCRFRSRE 267
Query: 184 GKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDGK-- 241
+ R+ +E ++ + N+Y+KNF + E+LK +F+P+G S VM +
Sbjct: 268 ERKRERERLRRERQQQHSKYPNLYVKNFDDTVTSERLKALFDPFGETVSVSVMMDKATKV 327
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDG-KILYVGRAQKKAERTQELK 289
SR FGFV+++ A +A+Q +G G + L+V A +K R Q L+
Sbjct: 328 SRCFGFVSFKEQSSAAQAIQELHGSTALGPRPLFVSYALRKDARRQTLE 376
>gi|402697283|gb|AFQ90829.1| polyA-binding protein cytoplasmic 1, partial [Dibamus sp. JJF-2012]
Length = 177
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 91/178 (51%), Positives = 111/178 (62%), Gaps = 2/178 (1%)
Query: 116 KNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGML 175
KNLDKSIDNKA+YDT SA G+ILS KV DE G SKGYG VHFE +EAA ++IEK
Sbjct: 1 KNLDKSIDNKALYDTXSAXGNILSXKVVCDENG-SKGYGXVHFEXQEAAERAIEKXXXXX 59
Query: 176 LNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRV 235
NVYIKNFGE +D +LKE+F +G +V
Sbjct: 60 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXNVYIKNFGEXMDDXRLKELFGKFGPALXVKV 119
Query: 236 MNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRF 292
M ++ GKS+GFGFV++E E A+KAV NGKE++GK +YVGRA KK ER ELKR+F
Sbjct: 120 MTDESGKSKGFGFVSFERHEDAQKAVDXMNGKELNGKQIYVGRAXKKVERQTELKRKF 177
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 54/88 (61%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV+IKN + +D+ + + F FG L KV DE G SKG+GFV FE E A K+++ +
Sbjct: 89 NVYIKNFGEXMDDXRLKELFGKFGPALXVKVMTDESGKSKGFGFVSFERHEDAQKAVDXM 148
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEK 199
NG LN K ++VG+ + ER+ EL K
Sbjct: 149 NGKELNGKQIYVGRAXKKVERQTELKRK 176
>gi|326430672|gb|EGD76242.1| polyadenylate binding protein [Salpingoeca sp. ATCC 50818]
Length = 765
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 87/203 (42%), Positives = 117/203 (57%), Gaps = 5/203 (2%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D E A+ +NF L GR IRIM +RDP R+SGVGN+FI L + + DTF FG
Sbjct: 132 DAEAAMGQLNFHDLHGRHIRIMKVERDPKKRRSGVGNIFISGLPADTTSVHLRDTFEQFG 191
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGM-LLNSKIVFVGKFIPRKEREK 194
ILSCK D G +G+GFVHFE + A ++I + NG + + V F PRK+RE+
Sbjct: 192 KILSCKAVLDHSGRCRGFGFVHFEDPKVAERAIAEANGKDAGGDRKLRVAPFKPRKQREQ 251
Query: 195 ELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITS--YRVMNNDGKSRGFGFVAYES 252
E E+ K FTNVY+K+ D ++E+L ++FEPYG ITS R R +GFV +
Sbjct: 252 EQEERTKNFTNVYVKSLRRDADEEELGKLFEPYGDITSKALRTYKLKDTERPYGFVNFAD 311
Query: 253 PEFAEKAVQAWNGKEVDGKILYV 275
E A+K V+ + D I YV
Sbjct: 312 TEAAQKCVEEGEMHQRD--IFYV 332
Score = 110 bits (275), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 127/235 (54%), Gaps = 19/235 (8%)
Query: 103 PSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETE 161
P+ + ++++ +L ++ +++ FS+ GS++S +V +D+ +S GYG+V+F
Sbjct: 71 PANPQGAAASLYVGDLSPQVNETELFNLFSSIGSVMSVRVCRDQITRSSLGYGYVNFNKA 130
Query: 162 EAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLK 221
E A ++ ++N L+ + + + K + R +++ G N++I D L+
Sbjct: 131 EDAEAAMGQLNFHDLHGRHIRIMK-VERDPKKRRSG-----VGNIFISGLPADTTSVHLR 184
Query: 222 EMFEPYGTITSYR-VMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDG-KILYVGRAQ 279
+ FE +G I S + V+++ G+ RGFGFV +E P+ AE+A+ NGK+ G + L V +
Sbjct: 185 DTFEQFGKILSCKAVLDHSGRCRGFGFVHFEDPKVAERAIAEANGKDAGGDRKLRVAPFK 244
Query: 280 KKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITS 334
+ +R QE + R + N+YVK+L D+E L K F P+G ITS
Sbjct: 245 PRKQREQEQEERTKNF----------TNVYVKSLRRDADEEELGKLFEPYGDITS 289
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 50/83 (60%)
Query: 111 GNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEK 170
GN+F+KN ++++ + + F G ++S KV +D++G S+ +GFV F T E A +I K
Sbjct: 438 GNLFVKNFNENVTEEDLRKFFEECGHVMSVKVMRDKEGVSRCFGFVTFATREEAESAIAK 497
Query: 171 VNGMLLNSKIVFVGKFIPRKERE 193
N L + ++V + R+ER+
Sbjct: 498 KNRQPLQDRPIYVAFHLTRQERQ 520
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
Query: 205 NVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPEFAEKAVQAW 263
N+++KNF E+ +E L++ FE G + S +VM + +G SR FGFV + + E AE A+
Sbjct: 439 NLFVKNFNENVTEEDLRKFFEECGHVMSVKVMRDKEGVSRCFGFVTFATREEAESAIAKK 498
Query: 264 NGKEVDGKILYVGRAQKKAER 284
N + + + +YV + ER
Sbjct: 499 NRQPLQDRPIYVAFHLTRQER 519
Score = 41.6 bits (96), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 57/138 (41%), Gaps = 24/138 (17%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND--GKSRGFGFVAYESPEFAEKAVQ 261
++Y+ + N+ +L +F G++ S RV + S G+G+V + E AE A+
Sbjct: 79 ASLYVGDLSPQVNETELFNLFSSIGSVMSVRVCRDQITRSSLGYGYVNFNKAEDAEAAMG 138
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIER--LNRYQGV-NLYVKNLDDSID 318
N ++ G R ++K+ER R GV N+++ L
Sbjct: 139 QLNFHDLHG-------------------RHIRIMKVERDPKKRRSGVGNIFISGLPADTT 179
Query: 319 DERLRKEFTPFGTITSAK 336
LR F FG I S K
Sbjct: 180 SVHLRDTFEQFGKILSCK 197
>gi|326430719|gb|EGD76289.1| polyadenylate binding protein [Salpingoeca sp. ATCC 50818]
Length = 642
Score = 156 bits (394), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 90/233 (38%), Positives = 129/233 (55%), Gaps = 6/233 (2%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D E A+ +NF L GR IRIM +RDP R+SGVGN+FI L + + DTF FG
Sbjct: 123 DAEAAMGQLNFHDLHGRHIRIMKVERDPKKRRSGVGNIFISGLPADTTSVHLRDTFEQFG 182
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNS-KIVFVGKFIPRKEREK 194
ILSCK D G +G+GFVHFE + A ++I + NG + + V F PRK+RE+
Sbjct: 183 KILSCKAVLDHSGRCRGFGFVHFEDPKVAERAIAEANGKDAGGDRKLRVAPFKPRKQREQ 242
Query: 195 ELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITS--YRVMNNDGKSRGFGFVAYES 252
E E+ K FTNVY+K+ ++E+L ++FEPYG ITS R R +GFV +
Sbjct: 243 EQEERTKNFTNVYVKSLRRGADEEELGKLFEPYGDITSKALRTYKLKDTERPYGFVNFAD 302
Query: 253 PEFAEKAVQAWNGKEVDGKILYV-GRAQKKAERTQELKRRFEMLKIERLNRYQ 304
E A+K V+ + D I YV G A ++ ++ ++ + E + R+
Sbjct: 303 TEAAQKCVEEGEMHQRD--IFYVDGMAFEEGKKVEDFVKTVEECAGSEVERHH 353
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 127/235 (54%), Gaps = 19/235 (8%)
Query: 103 PSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETE 161
P+ + ++++ +L ++ +++ FS+ GS++S +V +D+ +S GYG+V+F
Sbjct: 62 PANPQGAAASLYVGDLSPQVNETELFNLFSSIGSVMSVRVCRDQITRSSLGYGYVNFNKA 121
Query: 162 EAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLK 221
E A ++ ++N L+ + + + K + R +++ G N++I D L+
Sbjct: 122 EDAEAAMGQLNFHDLHGRHIRIMK-VERDPKKRRSG-----VGNIFISGLPADTTSVHLR 175
Query: 222 EMFEPYGTITSYR-VMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDG-KILYVGRAQ 279
+ FE +G I S + V+++ G+ RGFGFV +E P+ AE+A+ NGK+ G + L V +
Sbjct: 176 DTFEQFGKILSCKAVLDHSGRCRGFGFVHFEDPKVAERAIAEANGKDAGGDRKLRVAPFK 235
Query: 280 KKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITS 334
+ +R QE + R + N+YVK+L D+E L K F P+G ITS
Sbjct: 236 PRKQREQEQEERTKNF----------TNVYVKSLRRGADEEELGKLFEPYGDITS 280
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 48/81 (59%)
Query: 111 GNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEK 170
GN+++KN ++++ + + F G ++S KV +D++G S+ +GFV F T E A +I K
Sbjct: 429 GNLYVKNFNENVTEEDLRKFFEECGHVMSVKVMRDKEGVSRCFGFVTFATREEAESAIAK 488
Query: 171 VNGMLLNSKIVFVGKFIPRKE 191
N L + ++V + R+E
Sbjct: 489 KNRQPLQDRPIYVAFHLTRQE 509
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 45/72 (62%), Gaps = 1/72 (1%)
Query: 205 NVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPEFAEKAVQAW 263
N+Y+KNF E+ +E L++ FE G + S +VM + +G SR FGFV + + E AE A+
Sbjct: 430 NLYVKNFNENVTEEDLRKFFEECGHVMSVKVMRDKEGVSRCFGFVTFATREEAESAIAKK 489
Query: 264 NGKEVDGKILYV 275
N + + + +YV
Sbjct: 490 NRQPLQDRPIYV 501
Score = 42.0 bits (97), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 57/138 (41%), Gaps = 24/138 (17%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND--GKSRGFGFVAYESPEFAEKAVQ 261
++Y+ + N+ +L +F G++ S RV + S G+G+V + E AE A+
Sbjct: 70 ASLYVGDLSPQVNETELFNLFSSIGSVMSVRVCRDQITRSSLGYGYVNFNKAEDAEAAMG 129
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIER--LNRYQGV-NLYVKNLDDSID 318
N ++ G R ++K+ER R GV N+++ L
Sbjct: 130 QLNFHDLHG-------------------RHIRIMKVERDPKKRRSGVGNIFISGLPADTT 170
Query: 319 DERLRKEFTPFGTITSAK 336
LR F FG I S K
Sbjct: 171 SVHLRDTFEQFGKILSCK 188
>gi|14029147|gb|AAK51123.1| polyadenylated mRNA-binding protein 2 [Anemia phyllitidis]
Length = 472
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 84/165 (50%), Positives = 114/165 (69%), Gaps = 3/165 (1%)
Query: 173 GMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITS 232
GML+N K V V F+ R+ERE L A F NV++KN E+ DE L E+F +G I+S
Sbjct: 1 GMLINDKQVVVTPFVRRQERE--LTNAATKFNNVFVKNLAEETTDEDLMEVFGGFGPISS 58
Query: 233 YRVMNN-DGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRR 291
VM + +G S+ FGFV +++ + A KAV+ NGK + K YVGRAQKK+ER ELK +
Sbjct: 59 AVVMRDANGNSKCFGFVNFKNADDAAKAVENINGKVFNDKEWYVGRAQKKSEREAELKVK 118
Query: 292 FEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
FE L+ ER ++QGVNLY+KN+DDSIDDE+L++ F+ FGT+ S K
Sbjct: 119 FEQLRKERTEKFQGVNLYLKNVDDSIDDEKLKELFSGFGTVNSCK 163
Score = 133 bits (335), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 78/196 (39%), Positives = 116/196 (59%), Gaps = 11/196 (5%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NVF+KNL + ++ + + F FG I S V +D GNSK +GFV+F+ + A K++E +
Sbjct: 31 NVFVKNLAEETTDEDLMEVFGGFGPISSAVVMRDANGNSKCFGFVNFKNADDAAKAVENI 90
Query: 172 NGMLLNSKIVFVGKFIPRKEREKEL--------GEKAKLF--TNVYIKNFGEDFNDEKLK 221
NG + N K +VG+ + ERE EL E+ + F N+Y+KN + +DEKLK
Sbjct: 91 NGKVFNDKEWYVGRAQKKSEREAELKVKFEQLRKERTEKFQGVNLYLKNVDDSIDDEKLK 150
Query: 222 EMFEPYGTITSYRVMNN-DGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
E+F +GT+ S ++M + G+ G GFVA S + A +AV NGK V K LYV AQ+
Sbjct: 151 ELFSGFGTVNSCKIMRSPQGQIVGSGFVALSSKDEAMRAVNEMNGKMVGSKPLYVAVAQR 210
Query: 281 KAERTQELKRRFEMLK 296
K ER +L+ +F L+
Sbjct: 211 KDERRAKLQAQFAQLR 226
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 58/95 (61%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
N+++KN+D SID++ + + FS FG++ SCK+ + QG G GFV +++ A +++ ++
Sbjct: 134 NLYLKNVDDSIDDEKLKELFSGFGTVNSCKIMRSPQGQIVGSGFVALSSKDEAMRAVNEM 193
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNV 206
NG ++ SK ++V + ER +L + NV
Sbjct: 194 NGKMVGSKPLYVAVAQRKDERRAKLQAQFAQLRNV 228
>gi|260656096|pdb|2K8G|A Chain A, Solution Structure Of Rrm2 Domain Of Pabp1
Length = 95
Score = 154 bits (389), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 75/94 (79%), Positives = 84/94 (89%), Gaps = 1/94 (1%)
Query: 102 DPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETE 161
DPSLRKSGVGN+FIKNLDKSIDNKA+YDTFSAFG+ILSCKV DE G SKGYGFVHFET+
Sbjct: 3 DPSLRKSGVGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENG-SKGYGFVHFETQ 61
Query: 162 EAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
EAA ++IEK+NGMLLN + VFVG+F RKERE E
Sbjct: 62 EAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAE 95
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 54/83 (65%)
Query: 205 NVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWN 264
N++IKN + +++ L + F +G I S +V+ ++ S+G+GFV +E+ E AE+A++ N
Sbjct: 13 NIFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEKMN 72
Query: 265 GKEVDGKILYVGRAQKKAERTQE 287
G ++ + ++VGR + + ER E
Sbjct: 73 GMLLNDRKVFVGRFKSRKEREAE 95
>gi|402697279|gb|AFQ90827.1| polyA-binding protein cytoplasmic 1, partial [Chrysemys picta]
Length = 127
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 81/126 (64%), Positives = 99/126 (78%), Gaps = 2/126 (1%)
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ILS KV DE G SKGYGFVHFET+EAA ++IEK+NGMLLN + VFVG+F RKERE E
Sbjct: 1 NILSXKVVCDENG-SKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAE 59
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPE 254
LG +AK FTNVYIKNFGED +DE+LKE+F S +VM ++ GKS+GFGFV++E E
Sbjct: 60 LGARAKEFTNVYIKNFGEDMDDERLKELFGXXXPALSVKVMTDESGKSKGFGFVSFERHE 119
Query: 255 FAEKAV 260
A+KAV
Sbjct: 120 DAQKAV 125
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 58/98 (59%), Gaps = 10/98 (10%)
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S +V+ ++ S+G+GFV +E+ E AE+A++ NG ++ + ++VGR + + ER EL
Sbjct: 1 NILSXKVVCDENGSKGYGFVHFETQEAAERAIEKMNGMLLNDRKVFVGRFKSRKEREAEL 60
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEF 326
R + N+Y+KN + +DDERL++ F
Sbjct: 61 GARAKEF----------TNVYIKNFGEDMDDERLKELF 88
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 51/98 (52%), Gaps = 6/98 (6%)
Query: 77 TERALDTMNFDALKGRPIRI----MWSQRDPSL--RKSGVGNVFIKNLDKSIDNKAMYDT 130
ERA++ MN L R + + +R+ L R NV+IKN + +D++ + +
Sbjct: 28 AERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKEL 87
Query: 131 FSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSI 168
F LS KV DE G SKG+GFV FE E A K++
Sbjct: 88 FGXXXPALSVKVMTDESGKSKGFGFVSFERHEDAQKAV 125
>gi|340056333|emb|CCC50664.1| poly(A)-binding protein [Trypanosoma vivax Y486]
Length = 548
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 103/264 (39%), Positives = 157/264 (59%), Gaps = 14/264 (5%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D E+ALD L + IRI QRDPS R+SGV N+ +K L ++D A+ + FS +G
Sbjct: 62 DAEKALDQAGVK-LGSKHIRIARIQRDPSKRRSGVTNIVVKKLPPTVDTYALKEMFSKYG 120
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ + +A +E+G S+GY + +E EE+A ++++ VNGM ++ + V ++ P RE++
Sbjct: 121 RLTAIGLATNEKGESRGYARISYEKEESAIEAVQGVNGMTIDDCPITVERYQPH-HREEQ 179
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDGK-SRGFGFVAYESPE 254
L KL+TN+Y+KN DEKLKE+F YG +TS +V + GK S GF +VAY + E
Sbjct: 180 L----KLYTNLYVKNLDPSVGDEKLKEVFSAYGEVTSAKVRDLGGKMSVGFAYVAYATHE 235
Query: 255 FAEKAVQAWNGKE----VDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYV 310
A KAV+ + KE +G L V R + + ER +E +R + + ++Y NLYV
Sbjct: 236 AAVKAVEELDDKENPLAKEGMKLSVCRFRSREERQRERERL-RRERQQLYSKYP--NLYV 292
Query: 311 KNLDDSIDDERLRKEFTPFGTITS 334
KN DD++ ERL++ F FG S
Sbjct: 293 KNFDDTVTSERLKELFERFGETVS 316
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 72/227 (31%), Positives = 121/227 (53%), Gaps = 24/227 (10%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSIEK 170
++++ LD +++ + +YD F G + S +V D S GYG+V+F+ A K++++
Sbjct: 10 SIWVGGLDPNLNEQKLYDHFVRVGPVASVRVCVDTVTQKSLGYGYVNFQNPADAEKALDQ 69
Query: 171 VNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTI 230
G+ L SK + + + +++ ++ TN+ +K + LKEMF YG +
Sbjct: 70 A-GVKLGSKHIRIARI------QRDPSKRRSGVTNIVVKKLPPTVDTYALKEMFSKYGRL 122
Query: 231 TSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELK 289
T+ + N+ G+SRG+ ++YE E A +AVQ NG +D + V R Q
Sbjct: 123 TAIGLATNEKGESRGYARISYEKEESAIEAVQGVNGMTIDDCPITVERYQPH-------- 174
Query: 290 RRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
R E LK+ NLYVKNLD S+ DE+L++ F+ +G +TSAK
Sbjct: 175 HREEQLKLY-------TNLYVKNLDPSVGDEKLKEVFSAYGEVTSAK 214
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/193 (33%), Positives = 108/193 (55%), Gaps = 16/193 (8%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
N+++KNLD S+ ++ + + FSA+G + S KV S G+ +V + T EAA K++E++
Sbjct: 185 NLYVKNLDPSVGDEKLKEVFSAYGEVTSAKVRDLGGKMSVGFAYVAYATHEAAVKAVEEL 244
Query: 172 N---------GMLLNSKIVFVGKFIPRKEREKELGEKAKLFT---NVYIKNFGEDFNDEK 219
+ GM L S F + ++ERE+ E+ +L++ N+Y+KNF + E+
Sbjct: 245 DDKENPLAKEGMKL-SVCRFRSREERQRERERLRRERQQLYSKYPNLYVKNFDDTVTSER 303
Query: 220 LKEMFEPYGTITSYRVMNNDGK--SRGFGFVAYESPEFAEKAVQAWNGKEVDG-KILYVG 276
LKE+FE +G S VM + SR FGFV+++ A +A+Q +G G + L+V
Sbjct: 304 LKELFERFGETVSVSVMVDKATKVSRCFGFVSFKEQNSASRAIQELHGSTALGPRPLFVT 363
Query: 277 RAQKKAERTQELK 289
A +K R Q L+
Sbjct: 364 YALRKDARRQTLE 376
>gi|71659778|ref|XP_821609.1| poly(A)-binding protein [Trypanosoma cruzi strain CL Brener]
gi|459650|gb|AAC46487.1| poly(A) binding protein [Trypanosoma cruzi]
gi|515321|gb|AAC46489.1| poly(A) binding protein [Trypanosoma cruzi]
gi|2854066|gb|AAC02537.1| poly(A)-binding protein [Trypanosoma cruzi]
gi|2854068|gb|AAC02538.1| poly(A)-binding protein [Trypanosoma cruzi]
gi|70886993|gb|EAN99758.1| poly(A)-binding protein, putative [Trypanosoma cruzi]
gi|407408287|gb|EKF31789.1| poly(A)-binding protein, putative,polyadenylate-binding protein,
putative [Trypanosoma cruzi marinkellei]
gi|407847529|gb|EKG03215.1| poly(A)-binding protein, putative,polyadenylate-binding protein,
putative [Trypanosoma cruzi]
Length = 550
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 100/264 (37%), Positives = 156/264 (59%), Gaps = 14/264 (5%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D E+ALD L + IRI QRDPS R+SGV N+ +K L S+D A+ + FS +G
Sbjct: 62 DAEKALDQAGVK-LGSKHIRIAKIQRDPSKRRSGVTNIVVKKLPPSVDTYALKEMFSKYG 120
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ + +A +E G S+GY + +E EE+A +++++VNGM+++ + V ++ P RE++
Sbjct: 121 RLTAIGLATNENGESRGYARISYEKEESAIQAVQEVNGMVIDDCAITVERYQPH-HREEQ 179
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMN-NDGKSRGFGFVAYESPE 254
L K FTN+Y+KN NDEKLKE+F +G +TS +V + ++ GF +VAY + E
Sbjct: 180 L----KQFTNLYVKNLDPSVNDEKLKEVFSAFGEVTSAKVRDLGANQTVGFAYVAYATHE 235
Query: 255 FAEKAVQAWNGKEV----DGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYV 310
A KAV+ + KE +G L V R + + ER +E +R + + ++Y NLYV
Sbjct: 236 AAAKAVEELDEKESPLAKEGMKLSVCRFRSRDERQRERERLRRERQQQH-SKYP--NLYV 292
Query: 311 KNLDDSIDDERLRKEFTPFGTITS 334
KN DD++ ERL++ F G S
Sbjct: 293 KNFDDTVTSERLKELFERCGETVS 316
Score = 117 bits (292), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 74/227 (32%), Positives = 123/227 (54%), Gaps = 24/227 (10%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSIEK 170
++++ LD +++ + +YD F G + S +V D S GYG+V+F+ A K++++
Sbjct: 10 SIWVGGLDPNLNEQKLYDHFVRLGPVASVRVCVDSVTQKSLGYGYVNFQNPADAEKALDQ 69
Query: 171 VNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTI 230
G+ L SK + + K +++ ++ TN+ +K + LKEMF YG +
Sbjct: 70 A-GVKLGSKHIRIAKI------QRDPSKRRSGVTNIVVKKLPPSVDTYALKEMFSKYGRL 122
Query: 231 TSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELK 289
T+ + N+ G+SRG+ ++YE E A +AVQ NG +D + V R Q R ++LK
Sbjct: 123 TAIGLATNENGESRGYARISYEKEESAIQAVQEVNGMVIDDCAITVERYQPH-HREEQLK 181
Query: 290 RRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
Q NLYVKNLD S++DE+L++ F+ FG +TSAK
Sbjct: 182 --------------QFTNLYVKNLDPSVNDEKLKEVFSAFGEVTSAK 214
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 105/197 (53%), Gaps = 24/197 (12%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
N+++KNLD S++++ + + FSAFG + S KV + G+ +V + T EAA K++E++
Sbjct: 185 NLYVKNLDPSVNDEKLKEVFSAFGEVTSAKVRDLGANQTVGFAYVAYATHEAAAKAVEEL 244
Query: 172 N---------GMLLNSKIVFVGKFIPRKEREKELGEKAKL-------FTNVYIKNFGEDF 215
+ GM L+ V +F R ER++E + + N+Y+KNF +
Sbjct: 245 DEKESPLAKEGMKLS-----VCRFRSRDERQRERERLRRERQQQHSKYPNLYVKNFDDTV 299
Query: 216 NDEKLKEMFEPYGTITSYRVMNNDGK--SRGFGFVAYESPEFAEKAVQAWNGKEVDG-KI 272
E+LKE+FE G S VM + SR FGFV+++ A +A+Q +G G +
Sbjct: 300 TSERLKELFERCGETVSVSVMMDRATRVSRCFGFVSFKEQSAASRAIQELHGSTALGPRP 359
Query: 273 LYVGRAQKKAERTQELK 289
L+V A +K R Q L+
Sbjct: 360 LFVTYALRKDARRQTLE 376
>gi|440493085|gb|ELQ75593.1| Polyadenylate-binding protein (RRM superfamily), partial
[Trachipleistophora hominis]
Length = 513
Score = 150 bits (380), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 93/261 (35%), Positives = 147/261 (56%), Gaps = 12/261 (4%)
Query: 80 ALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILS 139
A++ +NF + + +R+M ++ ++ GN+ IKNL D+K ++DTFS FG ILS
Sbjct: 78 AVNKLNFFKVHDKEMRVMLYDKE-RIKSMDRGNIVIKNLSADCDSKTLHDTFSIFGEILS 136
Query: 140 CKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEK 199
CKVAQ+ QG KG+GFV F+ + A K+++ M ++ + V K+ E+ ++
Sbjct: 137 CKVAQNSQGKCKGFGFVQFKNKNGARKALKFGTEMQMDGHAIKVEKY----EKNYKIKTG 192
Query: 200 AKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITS-YRVMNNDGKSRGFGFVAYESPEFAEK 258
++ FTNV+ KNF +++LKE+F G ++S Y DG RGFGF YE+ A+K
Sbjct: 193 SRAFTNVFFKNFPSTTTEQQLKEIFMSIGKVSSFYFATKPDGGLRGFGFANYENAADAQK 252
Query: 259 AVQAWNGKEV-DGKI---LYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A+ +GK++ +GK YV +AQ K +R L FE L + LN + NLYV L
Sbjct: 253 AIDELSGKDIFEGKYPEPFYVQQAQTKQQRLDSLSSAFEKLSMSGLNYKR--NLYVTRLP 310
Query: 315 DSIDDERLRKEFTPFGTITSA 335
+ E + + F+ +G I S
Sbjct: 311 STYGKEEVEELFSQYGKIISV 331
Score = 39.7 bits (91), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGN-SKGYGFVHFETEEAANKSIEK 170
N+++ L + + + + FS +G I+S V +D N K + +V F T + A+ ++EK
Sbjct: 303 NLYVTRLPSTYGKEEVEELFSQYGKIISVCVGKDNVVNEDKNWAYVCFSTADEASIAVEK 362
Query: 171 VNGMLLNSKIVFVGKFIPRKEREKE 195
N + ++S + V F + ERE++
Sbjct: 363 GNEVYIDSVKINVTYFKSKNEREQD 387
>gi|296235783|ref|XP_002763047.1| PREDICTED: uncharacterized protein LOC100399785, partial
[Callithrix jacchus]
Length = 445
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 70/97 (72%), Positives = 82/97 (84%), Gaps = 3/97 (3%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP +D +RAL+T+NFD +KGRP+RIMWSQRDPSLRKSGVGNVFIKNL K+I
Sbjct: 352 GYAYVNYQQP--VDAKRALETLNFDVIKGRPVRIMWSQRDPSLRKSGVGNVFIKNLGKTI 409
Query: 123 DNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFE 159
DNKA+Y+ FSAFG+ILSCKVA DE+G KGYGFVHF+
Sbjct: 410 DNKALYNIFSAFGNILSCKVACDEKG-PKGYGFVHFQ 445
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 77/143 (53%), Gaps = 7/143 (4%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSI 168
+ ++++ +L + +Y+ FS G ILS ++ +D+ S GY +V+++ A +++
Sbjct: 309 MASLYVGDLHPEVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQPVDAKRAL 368
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
E +N ++ + V + +R+ L + NV+IKN G+ +++ L +F +G
Sbjct: 369 ETLNFDVIKGRPVRIMW----SQRDPSLRKSG--VGNVFIKNLGKTIDNKALYNIFSAFG 422
Query: 229 TITSYRVMNNDGKSRGFGFVAYE 251
I S +V ++ +G+GFV ++
Sbjct: 423 NILSCKVACDEKGPKGYGFVHFQ 445
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 64/137 (46%), Gaps = 20/137 (14%)
Query: 203 FTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAV 260
++Y+ + + + L E F P G I S R+ + +S G+ +V Y+ P A++A+
Sbjct: 309 MASLYVGDLHPEVTEAMLYEKFSPAGPILSIRICRDKITRRSLGYAYVNYQQPVDAKRAL 368
Query: 261 QAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGV-NLYVKNLDDSIDD 319
+ N + G+ + + +Q+ R GV N+++KNL +ID+
Sbjct: 369 ETLNFDVIKGRPVRIMWSQRDPSL-----------------RKSGVGNVFIKNLGKTIDN 411
Query: 320 ERLRKEFTPFGTITSAK 336
+ L F+ FG I S K
Sbjct: 412 KALYNIFSAFGNILSCK 428
>gi|401827787|ref|XP_003888186.1| polyadenylate-binding protein [Encephalitozoon hellem ATCC 50504]
gi|392999386|gb|AFM99205.1| polyadenylate-binding protein [Encephalitozoon hellem ATCC 50504]
Length = 500
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 99/273 (36%), Positives = 146/273 (53%), Gaps = 25/273 (9%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D E+A+ L R IR+M P GN+F+KNL +S +K + D FS FG
Sbjct: 65 DAEKAVREYKHYELHDRQIRVMRKDERPP----ETGNIFVKNLPESFTSKDLDDAFSMFG 120
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIE---KVNGMLLNSKIVFVGKFIPRKER 192
I+SCKVA QG SKGYGFV F+ + +A K I+ +NG++L + V + P
Sbjct: 121 EIVSCKVATTPQGKSKGYGFVQFKEKRSAKKVIKNFNNLNGLMLGGNKIVVELYNP---- 176
Query: 193 EKELGEKAK---LFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRV-MNNDGKSRGFGFV 248
E + GE K +FTN +IKNF +++L ++ E YG +TS +DGK +GF F
Sbjct: 177 EMKKGESKKVSTMFTNCFIKNFPGSVGEKELLDLLEKYGKVTSLCFPTKDDGKPKGFAFA 236
Query: 249 AYESPEFAEKAVQAW-------NGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
+E+ E A A+ NGK+ G+ Y+ + QK+ ER + L++ FE L ++ N
Sbjct: 237 NFETHESALNAINGLHGTFPFDNGKD-GGEPFYIQKGQKREERAEVLRKMFEQLSMQGQN 295
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITS 334
+ NLY+ N+ + E L F FG+ITS
Sbjct: 296 YKK--NLYITNIPEGFGAEELSNIFKEFGSITS 326
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 106/231 (45%), Gaps = 31/231 (13%)
Query: 85 NFDALKGRPI---RIMWSQRDPSLRK-------SGVGNVFIKNLDKSIDNKAMYDTFSAF 134
NF+ L G + +I+ +P ++K + N FIKN S+ K + D +
Sbjct: 155 NFNNLNGLMLGGNKIVVELYNPEMKKGESKKVSTMFTNCFIKNFPGSVGEKELLDLLEKY 214
Query: 135 GSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLL------NSKIVFVGKFIP 188
G + S + G KG+ F +FET E+A +I ++G + ++ K
Sbjct: 215 GKVTSLCFPTKDDGKPKGFAFANFETHESALNAINGLHGTFPFDNGKDGGEPFYIQKGQK 274
Query: 189 RKEREKELGEKAKLF-----------TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRV-M 236
R+ER + L K+F N+YI N E F E+L +F+ +G+ITS V +
Sbjct: 275 REERAEVL---RKMFEQLSMQGQNYKKNLYITNIPEGFGAEELSNIFKEFGSITSMSVGV 331
Query: 237 NNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQE 287
+ + + ++ Y +PE A AV+ N +DG L V + K ER +E
Sbjct: 332 DGANNQKQYAYICYSTPEEASIAVERGNEIYLDGNRLQVAYFKNKLERMKE 382
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 58/127 (45%), Gaps = 8/127 (6%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
N++I N+ + + + + F FGSI S V D N K Y ++ + T E A+ ++E+
Sbjct: 299 NLYITNIPEGFGAEELSNIFKEFGSITSMSVGVDGANNQKQYAYICYSTPEEASIAVERG 358
Query: 172 NGMLLNSKIVFVGKFIPRKEREKE-----LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEP 226
N + L+ + V F + ER KE LG K + Y+ N G F K
Sbjct: 359 NEIYLDGNRLQVAYFKNKLERMKEKEFGGLGYKPGI---PYMYNQGASFASNGFKRERSR 415
Query: 227 YGTITSY 233
G++ Y
Sbjct: 416 SGSVKPY 422
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 57/131 (43%), Gaps = 20/131 (15%)
Query: 206 VYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNG 265
+Y+ + D L +F G I + +++ + F FV +E+ E AEKAV+ +
Sbjct: 16 IYVGDLPPKTIDSDLFRIFSNVGKILNIKLIKRGESAPSFAFVTFENEEDAEKAVREYKH 75
Query: 266 KEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKE 325
E+ + + R +K ER E N++VKNL +S + L
Sbjct: 76 YELHDRQI---RVMRKDERPPETG-----------------NIFVKNLPESFTSKDLDDA 115
Query: 326 FTPFGTITSAK 336
F+ FG I S K
Sbjct: 116 FSMFGEIVSCK 126
>gi|326429915|gb|EGD75485.1| poly(A)-binding protein [Salpingoeca sp. ATCC 50818]
Length = 1688
Score = 147 bits (371), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 82/203 (40%), Positives = 113/203 (55%), Gaps = 5/203 (2%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D E A+ +NF L GR IRIM +RDP R+S N+ + L + + DTF FG
Sbjct: 301 DAEAAMGQLNFHDLHGRHIRIMKVERDPKKRRSDPRNIVVTGLPADTTSVHLRDTFEQFG 360
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLL-NSKIVFVGKFIPRKEREK 194
ILSCK D G +G+GFVHFE + A ++I + NG + + V F PRK+RE+
Sbjct: 361 KILSCKAVLDHSGRCRGFGFVHFEDPKVAERAIAEANGKDAGGDRKLRVAPFKPRKQREQ 420
Query: 195 ELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITS--YRVMNNDGKSRGFGFVAYES 252
E E+ K FTNVY+K+ D ++E+L ++FEPYG ITS R R +GFV +
Sbjct: 421 EQEERTKNFTNVYVKSLRRDADEEELGKLFEPYGDITSKALRTYKLKDTERPYGFVNFAD 480
Query: 253 PEFAEKAVQAWNGKEVDGKILYV 275
E A+K V+ + D I YV
Sbjct: 481 TEAAQKCVEEGEMHQRD--IFYV 501
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 120/228 (52%), Gaps = 23/228 (10%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSIEK 170
++++ +L ++ +++ FS+ GS++S +V +D+ S GYG+V+F E A ++ +
Sbjct: 249 SLYVGDLSPQVNETELFNLFSSIGSVMSVRVCRDQITHGSLGYGYVNFNKAEDAEAAMGQ 308
Query: 171 VNGMLLNSKIVFVGKF--IPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+N L+ + + + K P+K R N+ + D L++ FE +G
Sbjct: 309 LNFHDLHGRHIRIMKVERDPKKRRSDP--------RNIVVTGLPADTTSVHLRDTFEQFG 360
Query: 229 TITSYR-VMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDG-KILYVGRAQKKAERTQ 286
I S + V+++ G+ RGFGFV +E P+ AE+A+ NGK+ G + L V + + +R Q
Sbjct: 361 KILSCKAVLDHSGRCRGFGFVHFEDPKVAERAIAEANGKDAGGDRKLRVAPFKPRKQREQ 420
Query: 287 ELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITS 334
E + R + N+YVK+L D+E L K F P+G ITS
Sbjct: 421 EQEERTKNF----------TNVYVKSLRRDADEEELGKLFEPYGDITS 458
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 49/85 (57%)
Query: 111 GNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEK 170
GN+F+KN ++++ + + F G ++ KV +D +G S+ +GFV F T E A +I K
Sbjct: 607 GNLFVKNFNENVTEEDLRKFFEECGHVIDVKVMRDMEGVSRCFGFVIFATREEAESAIAK 666
Query: 171 VNGMLLNSKIVFVGKFIPRKEREKE 195
N L + ++V + R+ER K+
Sbjct: 667 KNRQTLQDRPIYVAFHLTRQERCKQ 691
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
Query: 205 NVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGKSRGFGFVAYESPEFAEKAVQAW 263
N+++KNF E+ +E L++ FE G + +VM + +G SR FGFV + + E AE A+
Sbjct: 608 NLFVKNFNENVTEEDLRKFFEECGHVIDVKVMRDMEGVSRCFGFVIFATREEAESAIAKK 667
Query: 264 NGKEVDGKILYVGRAQKKAERTQE 287
N + + + +YV + ER ++
Sbjct: 668 NRQTLQDRPIYVAFHLTRQERCKQ 691
>gi|344246646|gb|EGW02750.1| Polyadenylate-binding protein 1 [Cricetulus griseus]
Length = 127
Score = 147 bits (371), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 73/124 (58%), Positives = 97/124 (78%), Gaps = 1/124 (0%)
Query: 181 VFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND- 239
VFVG+F RKERE ELG +AK FTN+YIKNFGED +DE+LK++F +G + +VM ++
Sbjct: 4 VFVGRFKSRKEREAELGARAKDFTNIYIKNFGEDMDDERLKDLFGKFGPALNVKVMTDES 63
Query: 240 GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIER 299
GKS+GFGFV++E E A+KAV NGKE++GK +YVGRAQKK E+ ELKR+FE +K +R
Sbjct: 64 GKSKGFGFVSFEKHEDAQKAVDEMNGKELNGKQIYVGRAQKKMEQQTELKRKFEQMKQDR 123
Query: 300 LNRY 303
+ RY
Sbjct: 124 ITRY 127
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 57/88 (64%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
N++IKN + +D++ + D F FG L+ KV DE G SKG+GFV FE E A K+++++
Sbjct: 28 NIYIKNFGEDMDDERLKDLFGKFGPALNVKVMTDESGKSKGFGFVSFEKHEDAQKAVDEM 87
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEK 199
NG LN K ++VG+ + E++ EL K
Sbjct: 88 NGKELNGKQIYVGRAQKKMEQQTELKRK 115
>gi|378756066|gb|EHY66091.1| hypothetical protein NERG_00787 [Nematocida sp. 1 ERTm2]
Length = 513
Score = 147 bits (370), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 91/264 (34%), Positives = 151/264 (57%), Gaps = 12/264 (4%)
Query: 80 ALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILS 139
A++T NF L G IR+M ++ S+ + GN+ IKNL K DN+ +YDTF FG I+S
Sbjct: 77 AIETFNFYELNGSQIRVMPLDKE-SVVNNREGNIVIKNLPKETDNQTLYDTFIIFGPIVS 135
Query: 140 CKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEK 199
CKV ++ G G++ ++ + A +I+ +N ++LN K + + +P +REK+
Sbjct: 136 CKVVKNSLSECSGIGYIQYKDPKIAEVAIQMINKIMLNGKKLCAVQCVPNDKREKKRENV 195
Query: 200 AKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAEK 258
K+FTN+Y+KNF + +E++K+ E YG +TS+ V + G+ RGF F Y++ E AE
Sbjct: 196 EKIFTNIYMKNFPKGVEEEEIKKKLEEYGELTSFFVPRAETGEMRGFAFANYKTHEMAEA 255
Query: 259 AVQA------WNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKN 312
A+ + G +G+ LYV RA+ K+ER +E F + + R N+Y+ N
Sbjct: 256 AILGLHDKPFFGGNSGEGENLYVQRAKLKSERVEETAGYFANPPEQEVRR----NIYITN 311
Query: 313 LDDSIDDERLRKEFTPFGTITSAK 336
L +++E + K F+ +G I + K
Sbjct: 312 LPGDLNEEDVVKYFSKYGPINTYK 335
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 94/194 (48%), Gaps = 24/194 (12%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
N+++KN K ++ + + +G + S V + E G +G+ F +++T E A +I
Sbjct: 201 NIYMKNFPKGVEEEEIKKKLEEYGELTSFFVPRAETGEMRGFAFANYKTHEMAEAAI--- 257
Query: 172 NGMLLNSKIVFVGK-------FIPR-KEREKELGEKAKLFTN---------VYIKNFGED 214
+ L+ K F G ++ R K + + + E A F N +YI N D
Sbjct: 258 --LGLHDKPFFGGNSGEGENLYVQRAKLKSERVEETAGYFANPPEQEVRRNIYITNLPGD 315
Query: 215 FNDEKLKEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILY 274
N+E + + F YG I +Y++ + +R +G+V Y+ E A KAV+ N E G+ L
Sbjct: 316 LNEEDVVKYFSKYGPINTYKLGTDTKNNRSYGYVFYQKAEDAAKAVELANKSEYCGQPL- 374
Query: 275 VGRAQKKAERTQEL 288
G A K ++ +EL
Sbjct: 375 -GVAFFKCKKLREL 387
>gi|300707142|ref|XP_002995792.1| hypothetical protein NCER_101231 [Nosema ceranae BRL01]
gi|239605007|gb|EEQ82121.1| hypothetical protein NCER_101231 [Nosema ceranae BRL01]
Length = 508
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 101/276 (36%), Positives = 153/276 (55%), Gaps = 23/276 (8%)
Query: 78 ERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSI 137
+RA+ N L + IR++ + S R+ N+ +KNL S N+ +YDTFS FG+I
Sbjct: 65 DRAIKEYNNFRLNKKNIRVLPCMDEKSKREDA--NLIVKNLPSSFTNENLYDTFSVFGTI 122
Query: 138 LSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIP---RKEREK 194
+S K+A G K YGFV F+ +++A +I+ +G L++KI+ V F RK+ E+
Sbjct: 123 ISAKIATYADGKPKNYGFVQFDKKKSAKMAIKHCDGGKLDNKIIQVEIFDKEKRRKQEEQ 182
Query: 195 ELGEK-AKL---FTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDGK--SRGFGFV 248
L K KL FTN +IKNF E F ++ L+ + YG ITS DG S+GF F
Sbjct: 183 ALENKPVKLEPKFTNCFIKNFPESFTEKDLESLLNKYGNITSIYFPLKDGTFVSKGFAFA 242
Query: 249 AYESPEFAEKAVQAWNGKEV----------DGKILYVGRAQKKAERTQELKRRFEMLKIE 298
+ES E A+ A+Q +GK++ + Y+ +AQKK ER + LKR FE L +E
Sbjct: 243 NFESHESAQNAIQELHGKQIFPFEENSYTTKLEPFYIQKAQKKEEREEYLKRSFEQLSLE 302
Query: 299 RLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITS 334
N + NLY+ N+ I+ + + + F+ FG+I S
Sbjct: 303 GQNIKR--NLYITNIPAFIEKDDIFEIFSEFGSIVS 336
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 106/220 (48%), Gaps = 30/220 (13%)
Query: 88 ALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVA-QDE 146
AL+ +P+++ +P N FIKN +S K + + +G+I S +D
Sbjct: 183 ALENKPVKL-----EPKF-----TNCFIKNFPESFTEKDLESLLNKYGNITSIYFPLKDG 232
Query: 147 QGNSKGYGFVHFETEEAANKSIEKVNGMLL-----NS-----KIVFVGKFIPRKEREKEL 196
SKG+ F +FE+ E+A +I++++G + NS + ++ K ++ERE+ L
Sbjct: 233 TFVSKGFAFANFESHESAQNAIQELHGKQIFPFEENSYTTKLEPFYIQKAQKKEEREEYL 292
Query: 197 G--------EKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRV-MNNDGKSRGFGF 247
E + N+YI N + + E+F +G+I S+ + ++ + R + +
Sbjct: 293 KRSFEQLSLEGQNIKRNLYITNIPAFIEKDDIFEIFSEFGSIVSFSIGIDAVNEQRKYAY 352
Query: 248 VAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQE 287
V Y + + A A++ N +D L V + KAERT+E
Sbjct: 353 VCYSTSDEAFIAIEKGNELFIDNNKLNVTYFKNKAERTKE 392
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 30/135 (22%), Positives = 58/135 (42%), Gaps = 18/135 (13%)
Query: 202 LFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQ 261
+F +Y+ + + L +F G + ++ F FV + + + A++A++
Sbjct: 10 IFATIYVGDLSSKTLESDLFRIFSSIGEVVKIKLKKRIEPLSSFAFVTFANGDAADRAIK 69
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDER 321
+N ++ K + V + ++ ++ + NL VKNL S +E
Sbjct: 70 EYNNFRLNKKNIRV------------------LPCMDEKSKREDANLIVKNLPSSFTNEN 111
Query: 322 LRKEFTPFGTITSAK 336
L F+ FGTI SAK
Sbjct: 112 LYDTFSVFGTIISAK 126
>gi|351704535|gb|EHB07454.1| Polyadenylate-binding protein 1 [Heterocephalus glaber]
Length = 281
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 74/123 (60%), Positives = 93/123 (75%), Gaps = 4/123 (3%)
Query: 215 FNDEKLKEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKIL 273
+DE+LK++F P S +VM ++ GKS+GF FV++E E A+KAV NGKE++GK +
Sbjct: 1 MDDERLKDLFRP---ALSVKVMTDESGKSKGFRFVSFERHEDAQKAVDEMNGKELNGKQI 57
Query: 274 YVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTIT 333
YVGRAQKK E E K +FE +K + + RYQGVNLYVKNLDD IDDE LRKEF+PFGTIT
Sbjct: 58 YVGRAQKKVEPQTEPKHKFEQMKQDTITRYQGVNLYVKNLDDGIDDEHLRKEFSPFGTIT 117
Query: 334 SAK 336
SAK
Sbjct: 118 SAK 120
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 70/169 (41%), Positives = 97/169 (57%), Gaps = 10/169 (5%)
Query: 134 FGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKERE 193
F LS KV DE G SKG+ FV FE E A K+++++NG LN K ++VG+ + E +
Sbjct: 10 FRPALSVKVMTDESGKSKGFRFVSFERHEDAQKAVDEMNGKELNGKQIYVGRAQKKVEPQ 69
Query: 194 KELGEKAKLF----------TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDGKSR 243
E K + N+Y+KN + +DE L++ F P+GTITS +VM G+S+
Sbjct: 70 TEPKHKFEQMKQDTITRYQGVNLYVKNLDDGIDDEHLRKEFSPFGTITSAKVMMEGGRSK 129
Query: 244 GFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRF 292
GFGFV + SPE A KAV+ NG+ V K LYV AQ K E L ++
Sbjct: 130 GFGFVCFSSPEEATKAVKEMNGRTVATKPLYVALAQLKEESPAHLTSQY 178
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 69/126 (54%), Gaps = 19/126 (15%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQR-----------------DPSLRKSGVGNVFIKNL 118
D ++A+D MN L G+ I + +Q+ D R GV N+++KNL
Sbjct: 39 DAQKAVDEMNGKELNGKQIYVGRAQKKVEPQTEPKHKFEQMKQDTITRYQGV-NLYVKNL 97
Query: 119 DKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNS 178
D ID++ + FS FG+I S KV E G SKG+GFV F + E A K+++++NG + +
Sbjct: 98 DDGIDDEHLRKEFSPFGTITSAKVMM-EGGRSKGFGFVCFSSPEEATKAVKEMNGRTVAT 156
Query: 179 KIVFVG 184
K ++V
Sbjct: 157 KPLYVA 162
>gi|396082305|gb|AFN83915.1| polyadenylate-binding protein 2 [Encephalitozoon romaleae SJ-2008]
Length = 415
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 92/242 (38%), Positives = 138/242 (57%), Gaps = 19/242 (7%)
Query: 106 RKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAAN 165
R GN+F+KNL +S +K + D FS FG I+SCKVA QG SKGYGFV F+ ++AA
Sbjct: 6 RPPETGNIFVKNLPESFTSKDLDDAFSMFGEIVSCKVATTPQGKSKGYGFVQFKEKKAAK 65
Query: 166 KSIE---KVNGMLLNSKIVFVGKFIPRKEREKELGEKAK---LFTNVYIKNFGEDFNDEK 219
K I+ +NG++L + V + P ++ GE K +FTN +IKNF D +++
Sbjct: 66 KVIKNFNNLNGLMLGGNKIAVELYNPDMKK----GESKKVSTMFTNCFIKNFPVDTTEKE 121
Query: 220 LKEMFEPYGTITS-YRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNG------KEVDGKI 272
L E+ YG +TS Y + +DGK +GF F +ES E A A+ +G + G+
Sbjct: 122 LLELLVRYGKVTSLYFPIKDDGKPKGFAFANFESHESALNAINNLHGAFPFDSSKDGGEP 181
Query: 273 LYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTI 332
Y+ + Q+K ER +EL++ FE L ++ + + NLY+ N+ + E L F FG+I
Sbjct: 182 FYIQKGQRKEERAEELRKMFEQLSMQGQSYRK--NLYITNIPEGFGAEELNNIFKEFGSI 239
Query: 333 TS 334
TS
Sbjct: 240 TS 241
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/228 (27%), Positives = 106/228 (46%), Gaps = 25/228 (10%)
Query: 85 NFDALKGRPI---RIMWSQRDPSLRK-------SGVGNVFIKNLDKSIDNKAMYDTFSAF 134
NF+ L G + +I +P ++K + N FIKN K + + +
Sbjct: 70 NFNNLNGLMLGGNKIAVELYNPDMKKGESKKVSTMFTNCFIKNFPVDTTEKELLELLVRY 129
Query: 135 GSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLL--NSKIVFVGKFIPRKER 192
G + S + G KG+ F +FE+ E+A +I ++G +SK +I + +R
Sbjct: 130 GKVTSLYFPIKDDGKPKGFAFANFESHESALNAINNLHGAFPFDSSKDGGEPFYIQKGQR 189
Query: 193 EKELGEKA-KLF-----------TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRV-MNND 239
++E E+ K+F N+YI N E F E+L +F+ +G+ITS V ++
Sbjct: 190 KEERAEELRKMFEQLSMQGQSYRKNLYITNIPEGFGAEELNNIFKEFGSITSMSVGIDGA 249
Query: 240 GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQE 287
+ + ++ Y +PE A AV+ N +DG L V + K ER +E
Sbjct: 250 NSQKQYAYICYSTPEEASIAVERGNEIYLDGNRLQVSYFKNKLERMKE 297
>gi|384495100|gb|EIE85591.1| hypothetical protein RO3G_10301 [Rhizopus delemar RA 99-880]
Length = 359
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 90/266 (33%), Positives = 134/266 (50%), Gaps = 49/266 (18%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D A + +N + G R+M S+R+ + R SG GN+ +KNL ++DNK++YDTFS +G
Sbjct: 89 DCSAAFENLNHSKIDGTTYRLMISERETTKRVSGAGNIILKNLHPNVDNKSLYDTFSRWG 148
Query: 136 SILSCKVAQDEQGNS-KGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREK 194
+++SC+V G S KGYGFV+++T AA ++I VNG +L K V + + E+E
Sbjct: 149 NVISCRVFNKLTGGSVKGYGFVNYDTYAAAERAISFVNGKMLFGKEVHASHQVLKNEKES 208
Query: 195 ELG---EKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GKSRGFGFVAY 250
L ++ FTNVY+KN D ++ L E+F G ++S V +D K +GFGFV +
Sbjct: 209 LLSHNDQQHCRFTNVYVKNLSSDVTEDDLGELFSTIGPVSSVLVQRDDQHKPKGFGFVNF 268
Query: 251 ESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYV 310
E PE AE+AV + K+
Sbjct: 269 ELPEDAERAVNELHDKDF------------------------------------------ 286
Query: 311 KNLDDSIDDERLRKEFTPFGTITSAK 336
+ + DE L F P+GTITSAK
Sbjct: 287 --FAEDVTDEILINNFLPYGTITSAK 310
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 102/213 (47%), Gaps = 45/213 (21%)
Query: 78 ERALDTMNFDALKGRPI----RIMWSQRDPSL-----RKSGVGNVFIKNLDKSIDNKAMY 128
ERA+ +N L G+ + +++ ++++ L + NV++KNL + +
Sbjct: 179 ERAISFVNGKMLFGKEVHASHQVLKNEKESLLSHNDQQHCRFTNVYVKNLSSDVTEDDLG 238
Query: 129 DTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIP 188
+ FS G + S V +D+Q KG+GFV+FE E A +++ +++
Sbjct: 239 ELFSTIGPVSSVLVQRDDQHKPKGFGFVNFELPEDAERAVNELH---------------- 282
Query: 189 RKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND--GKSRGFG 246
+K+ F ED DE L F PYGTITS ++M ++ G +GFG
Sbjct: 283 ----DKDF--------------FAEDVTDEILINNFLPYGTITSAKIMKDESTGAPKGFG 324
Query: 247 FVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQ 279
FV + S + A +AV NG+ + K +YV AQ
Sbjct: 325 FVCFSSSDEANRAVAEMNGRFISSKPIYVALAQ 357
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 99/204 (48%), Gaps = 16/204 (7%)
Query: 134 FGSILSCKVAQDEQGN-SKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKER 192
FG++ S +V +D N S GY ++F T + + + E +N +SKI G
Sbjct: 59 FGNVKSVQVCRDSVTNQSLGYAHINFYTPQDCSAAFENLN----HSKID--GTTYRLMIS 112
Query: 193 EKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMN--NDGKSRGFGFVAY 250
E+E ++ N+ +KN + +++ L + F +G + S RV N G +G+GFV Y
Sbjct: 113 ERETTKRVSGAGNIILKNLHPNVDNKSLYDTFSRWGNVISCRVFNKLTGGSVKGYGFVNY 172
Query: 251 ESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYV 310
++ AE+A+ NGK + GK ++ K E+ +L + N+YV
Sbjct: 173 DTYAAAERAISFVNGKMLFGKEVHASHQVLKNEKES-------LLSHNDQQHCRFTNVYV 225
Query: 311 KNLDDSIDDERLRKEFTPFGTITS 334
KNL + ++ L + F+ G ++S
Sbjct: 226 KNLSSDVTEDDLGELFSTIGPVSS 249
>gi|429966446|gb|ELA48443.1| hypothetical protein VCUG_00052 [Vavraia culicis 'floridensis']
Length = 511
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 90/261 (34%), Positives = 148/261 (56%), Gaps = 12/261 (4%)
Query: 80 ALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILS 139
A++ +NF + + +R+M ++ ++ GN+ IKNL D+K ++DTFS FG ILS
Sbjct: 76 AVNKLNFFKVHDKEMRVMLYDKE-RIKSMDRGNIVIKNLSADCDSKTLHDTFSIFGEILS 134
Query: 140 CKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEK 199
CKVA + QG KG+GFV F+ + A K+++ M ++ + V K+ E+ ++
Sbjct: 135 CKVALNSQGKCKGFGFVQFKNKNGARKALKFGTEMQMDGHAIKVEKY----EKNYKIKTG 190
Query: 200 AKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITS-YRVMNNDGKSRGFGFVAYESPEFAEK 258
++ FTNV+ KNF ++++K++F G ++S Y DG RGFGF YE+ A++
Sbjct: 191 SRAFTNVFFKNFPLTTTEQEMKDIFMSIGKVSSFYFAAKPDGTLRGFGFANYENATDAQR 250
Query: 259 AVQAWNGKEV-DGKI---LYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
A+ +GK+V +GK YV +AQ K +R L FE L + LN + NLYV L
Sbjct: 251 AIDELSGKDVFEGKYPEPFYVQQAQTKQQRLDSLSSAFEKLSMSGLNYKR--NLYVTRLP 308
Query: 315 DSIDDERLRKEFTPFGTITSA 335
++ E +++ F+ FG + S
Sbjct: 309 NTYGKEEVQELFSQFGKVISV 329
Score = 40.8 bits (94), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 65/139 (46%), Gaps = 19/139 (13%)
Query: 76 DTERALDTMN----FDALKGRPIRIMWSQRDPS-----------LRKSGVG---NVFIKN 117
D +RA+D ++ F+ P + +Q L SG+ N+++
Sbjct: 247 DAQRAIDELSGKDVFEGKYPEPFYVQQAQTKQQRLDSLSSAFEKLSMSGLNYKRNLYVTR 306
Query: 118 LDKSIDNKAMYDTFSAFGSILSCKVAQDEQGN-SKGYGFVHFETEEAANKSIEKVNGMLL 176
L + + + + FS FG ++S V +D N K + +V F T + A+ ++EK N + +
Sbjct: 307 LPNTYGKEEVQELFSQFGKVISVCVGKDNVVNEDKNWAYVCFSTADEASIAVEKGNEIYI 366
Query: 177 NSKIVFVGKFIPRKEREKE 195
+S + + F + ERE++
Sbjct: 367 DSVKINITYFKSKNEREQD 385
>gi|344244233|gb|EGW00337.1| Polyadenylate-binding protein 1 [Cricetulus griseus]
Length = 101
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 73/103 (70%), Positives = 85/103 (82%), Gaps = 4/103 (3%)
Query: 84 MNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVA 143
MN D +KG+PI IMWSQRD SLRKSGVGNVFIKN+DKS DNKA+YD F+AFG+ILSC+V
Sbjct: 1 MNTDVVKGKPIPIMWSQRDSSLRKSGVGNVFIKNVDKSSDNKALYDPFAAFGNILSCQVV 60
Query: 144 QDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKF 186
DE G SKGYGFVH +T+EAA IEK++GMLLN VFV +F
Sbjct: 61 FDENG-SKGYGFVHLKTQEAA---IEKMDGMLLNECKVFVCRF 99
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 56/102 (54%), Gaps = 4/102 (3%)
Query: 176 LNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRV 235
+N+ +V GK IP +++ + NV+IKN + +++ L + F +G I S +V
Sbjct: 1 MNTDVV-KGKPIPIMWSQRDSSLRKSGVGNVFIKNVDKSSDNKALYDPFAAFGNILSCQV 59
Query: 236 MNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGR 277
+ ++ S+G+GFV ++ E A++ +G ++ ++V R
Sbjct: 60 VFDENGSKGYGFVHLKT---QEAAIEKMDGMLLNECKVFVCR 98
>gi|14571727|emb|CAC42820.1| Poly(A)-binding protein cytoplasmic 5 [Mus musculus]
Length = 119
Score = 144 bits (363), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 67/108 (62%), Positives = 87/108 (80%), Gaps = 1/108 (0%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D E AL+TMNFD + G+P R+MWSQ D LRKSGVGN+FIKNLDK+IDN+A++ FSAFG
Sbjct: 13 DAEWALNTMNFDLINGKPFRLMWSQPDDRLRKSGVGNIFIKNLDKTIDNRALFYLFSAFG 72
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFV 183
+ILSCKV D+ G SKGY +VHF++ AAN++I VNG+ LN++ V+V
Sbjct: 73 NILSCKVVCDDNG-SKGYAYVHFDSLAAANRAIWHVNGVRLNNRQVYV 119
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 65/124 (52%), Gaps = 6/124 (4%)
Query: 152 GYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNF 211
GYG+V+F A ++ +N L+N K F + +R ++ G N++IKN
Sbjct: 2 GYGYVNFRFPADAEWALNTMNFDLINGK-PFRLMWSQPDDRLRKSG-----VGNIFIKNL 55
Query: 212 GEDFNDEKLKEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGK 271
+ ++ L +F +G I S +V+ +D S+G+ +V ++S A +A+ NG ++ +
Sbjct: 56 DKTIDNRALFYLFSAFGNILSCKVVCDDNGSKGYAYVHFDSLAAANRAIWHVNGVRLNNR 115
Query: 272 ILYV 275
+YV
Sbjct: 116 QVYV 119
Score = 40.8 bits (94), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 43/93 (46%), Gaps = 16/93 (17%)
Query: 244 GFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRY 303
G+G+V + P AE A+ N ++GK + +Q +RL +
Sbjct: 2 GYGYVNFRFPADAEWALNTMNFDLINGKPFRLMWSQPD----------------DRLRKS 45
Query: 304 QGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
N+++KNLD +ID+ L F+ FG I S K
Sbjct: 46 GVGNIFIKNLDKTIDNRALFYLFSAFGNILSCK 78
>gi|154345147|ref|XP_001568515.1| putative poly(A)-binding protein 2 [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134065852|emb|CAM43630.1| putative poly(A)-binding protein 2 [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 579
Score = 144 bits (363), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 93/271 (34%), Positives = 144/271 (53%), Gaps = 27/271 (9%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D E+ALD L R +RI QRDPS R+SGV N+ +K L K++D A+ + FS FG
Sbjct: 61 DAEKALDQAG-TKLGSRYLRIAKIQRDPSKRRSGVNNILVKKLPKTVDTYALKELFSKFG 119
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ + +A DE+G S+GY + FE EE+A +++++++GM ++ + + V ++ + +
Sbjct: 120 RLTAIGLACDEKGESRGYARISFEREESAVEAVKEMDGMEMDGQAIVVERY-----QAQH 174
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDG--KSRGFGFVAYESP 253
E K FTN+Y+KN DEKL+ F YG ++S +V + G G G+VA+E
Sbjct: 175 RDELLKQFTNLYVKNLDPAVTDEKLRAFFARYGAVSSAKVRDLGGVQSEVGLGYVAFEKH 234
Query: 254 EFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKR----------RFEMLKIERLNRY 303
E A +AV+ NGKE + KAE T ++ R R +
Sbjct: 235 EDAARAVEELNGKECE---------IAKAESTLDVSRFRSREERQRDRERQRRERAQQHS 285
Query: 304 QGVNLYVKNLDDSIDDERLRKEFTPFGTITS 334
+ NLYVK DD++ ERL + F +G S
Sbjct: 286 KYPNLYVKGFDDTVTSERLEELFQRYGETVS 316
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 121/227 (53%), Gaps = 24/227 (10%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGN-SKGYGFVHFETEEAANKSIEK 170
++++ LD + + +YD F G + S +V D S GYG+V+F+ A K++++
Sbjct: 9 SIWVGGLDPDLQEQRLYDYFVRIGPVTSVRVCVDSATQKSLGYGYVNFQDPADAEKALDQ 68
Query: 171 VNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTI 230
G L S+ + + K I R ++ G N+ +K + + LKE+F +G +
Sbjct: 69 A-GTKLGSRYLRIAK-IQRDPSKRRSG-----VNNILVKKLPKTVDTYALKELFSKFGRL 121
Query: 231 TSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELK 289
T+ + ++ G+SRG+ +++E E A +AV+ +G E+DG+ + V R Q +
Sbjct: 122 TAIGLACDEKGESRGYARISFEREESAVEAVKEMDGMEMDGQAIVVERYQAQ-------- 173
Query: 290 RRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
R E+LK Q NLYVKNLD ++ DE+LR F +G ++SAK
Sbjct: 174 HRDELLK-------QFTNLYVKNLDPAVTDEKLRAFFARYGAVSSAK 213
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 121/235 (51%), Gaps = 19/235 (8%)
Query: 81 LDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSC 140
+D M D R RD L++ N+++KNLD ++ ++ + F+ +G++ S
Sbjct: 155 MDGMEMDGQAIVVERYQAQHRDELLKQ--FTNLYVKNLDPAVTDEKLRAFFARYGAVSSA 212
Query: 141 KVAQDEQG--NSKGYGFVHFETEEAANKSIEKVNG----MLLNSKIVFVGKFIPRKEREK 194
KV +D G + G G+V FE E A +++E++NG + + V +F R+ER++
Sbjct: 213 KV-RDLGGVQSEVGLGYVAFEKHEDAARAVEELNGKECEIAKAESTLDVSRFRSREERQR 271
Query: 195 ELGEKAKL-------FTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGF 245
+ + + + N+Y+K F + E+L+E+F+ YG S VM + G SR F
Sbjct: 272 DRERQRRERAQQHSKYPNLYVKGFDDTVTSERLEELFQRYGETVSVTVMMDKETGMSRCF 331
Query: 246 GFVAYESPEFAEKAVQAWNGKE-VDGKILYVGRAQKKAERTQELKRRFEMLKIER 299
GFV+ + A +A+Q NG + + L+V A +K R Q L+ R + ++ +
Sbjct: 332 GFVSMKDQNAASQAIQELNGSTFLCPRPLFVTYALRKDARRQNLEERSKQFRVRQ 386
>gi|123408784|ref|XP_001303266.1| Polyadenylate-binding protein [Trichomonas vaginalis G3]
gi|121884631|gb|EAX90336.1| Polyadenylate-binding protein, putative [Trichomonas vaginalis G3]
Length = 461
Score = 144 bits (362), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 92/260 (35%), Positives = 147/260 (56%), Gaps = 14/260 (5%)
Query: 79 RALDTMNFDALKGRPIRIMWSQRDP-SLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSI 137
+A+ +N+ L GRPIRI+W + ++ KSG G++FI LD+SI+ ++D FS FG I
Sbjct: 63 KAMKNLNYTKLDGRPIRILWCDTETKAIIKSGRGSLFINGLDESIEVSQLHDAFSNFGEI 122
Query: 138 LSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELG 197
+SCK+ + G S+GYG++ F E A K+ ++ +N K + + + + R +
Sbjct: 123 ISCKIPLTD-GKSRGYGYIQFRNPENAEKAKLELADASINGKPIKIDNYNRKSRRNPD-- 179
Query: 198 EKAKLFTNVYIKNFGEDF--NDEKLKEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPE 254
+ FTNVYIK D DE L+++FEP+G I + + ++ G S+GFGF ++ E
Sbjct: 180 ---EDFTNVYIKPLPVDQVKTDEDLRKIFEPFGEIQNPSLKKDENGNSKGFGFCNFKLHE 236
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAER-TQELKRRFEMLKIERL-NRYQGVNLYVKN 312
A KAV+ NG+E+ G L V R K E+ +K+ E K+E+ G NLYVK+
Sbjct: 237 DAVKAVEGLNGQEMFGVTLQVNRLMSKREKELYNIKKHTE--KVEKFAEETNGRNLYVKS 294
Query: 313 LDDSIDDERLRKEFTPFGTI 332
+ D+ ++ F+ FG I
Sbjct: 295 FSKDVTDKEFQEYFSKFGEI 314
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 118/213 (55%), Gaps = 21/213 (9%)
Query: 88 ALKGRPIRI----MWSQRDPSLRKSGVGNVFIKNL--DKSIDNKAMYDTFSAFGSILSCK 141
++ G+PI+I S+R+P NV+IK L D+ ++ + F FG I +
Sbjct: 159 SINGKPIKIDNYNRKSRRNPD---EDFTNVYIKPLPVDQVKTDEDLRKIFEPFGEIQNPS 215
Query: 142 VAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKERE----KELG 197
+ +DE GNSKG+GF +F+ E A K++E +NG + + V + + ++E+E K+
Sbjct: 216 LKKDENGNSKGFGFCNFKLHEDAVKAVEGLNGQEMFGVTLQVNRLMSKREKELYNIKKHT 275
Query: 198 EKAKLFT------NVYIKNFGEDFNDEKLKEMFEPYGTITSYRV--MNNDGKSRGFGFVA 249
EK + F N+Y+K+F +D D++ +E F +G I +++ + +S+GFGFV
Sbjct: 276 EKVEKFAEETNGRNLYVKSFSKDVTDKEFQEYFSKFGEIELFKIERVPETKESKGFGFVL 335
Query: 250 YESPEFAEKAVQAWNGKEVDGKILYVGRAQKKA 282
Y+S E A+ A++ + + G + YVG Q KA
Sbjct: 336 YKSKEDAQNAIEMAMLERLHGDLPYVGFFQTKA 368
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 102/224 (45%), Gaps = 24/224 (10%)
Query: 113 VFIKNLDKSIDNKAMYDTFSAFGSIL--SCKVAQDEQGNSKGYGFVHFETEEAANKSIEK 170
+F+ +L K ID + F+ G I+ S V + + + FV F T E A K+++
Sbjct: 8 IFVGDLPKDIDESFLKQFFAESGEIIPNSGIVLKKHKTLDSSFAFVTFATHEQAAKAMKN 67
Query: 171 VNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTI 230
+N L+ + + + + K + + + +++I E +L + F +G I
Sbjct: 68 LNYTKLDGRPI---RILWCDTETKAIIKSGR--GSLFINGLDESIEVSQLHDAFSNFGEI 122
Query: 231 TSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKR 290
S ++ DGKSRG+G++ + +PE AEKA ++GK + + +K+ R +
Sbjct: 123 ISCKIPLTDGKSRGYGYIQFRNPENAEKAKLELADASINGKPIKIDNYNRKSRRNPD--- 179
Query: 291 RFEMLKIERLNRYQGVNLYVKNL--DDSIDDERLRKEFTPFGTI 332
N+Y+K L D DE LRK F PFG I
Sbjct: 180 ------------EDFTNVYIKPLPVDQVKTDEDLRKIFEPFGEI 211
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQ-DEQGNSKGYGFVHFETEEAANKSIEK 170
N+++K+ K + +K + FS FG I K+ + E SKG+GFV ++++E A +IE
Sbjct: 289 NLYVKSFSKDVTDKEFQEYFSKFGEIELFKIERVPETKESKGFGFVLYKSKEDAQNAIEM 348
Query: 171 VNGMLLNSKIVFVGKFIPRKEREK 194
L+ + +VG F + E+
Sbjct: 349 AMLERLHGDLPYVGFFQTKAAHER 372
Score = 38.5 bits (88), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 64/143 (44%), Gaps = 24/143 (16%)
Query: 200 AKLFTNVYIKNFGEDFNDEKLKEMFEPYGTI---TSYRVMNNDGKSRGFGFVAYESPEFA 256
A L T +++ + +D ++ LK+ F G I + + + F FV + + E A
Sbjct: 2 ATLTTQIFVGDLPKDIDESFLKQFFAESGEIIPNSGIVLKKHKTLDSSFAFVTFATHEQA 61
Query: 257 EKAVQAWNGKEVDGK---ILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNL 313
KA++ N ++DG+ IL+ K ++K R +L++ L
Sbjct: 62 AKAMKNLNYTKLDGRPIRILWCDTETKA------------IIKSGR------GSLFINGL 103
Query: 314 DDSIDDERLRKEFTPFGTITSAK 336
D+SI+ +L F+ FG I S K
Sbjct: 104 DESIEVSQLHDAFSNFGEIISCK 126
>gi|342183555|emb|CCC93035.1| poly(A)-binding protein 1 [Trypanosoma congolense IL3000]
Length = 557
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 97/264 (36%), Positives = 154/264 (58%), Gaps = 14/264 (5%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D E+ALD L + IRI QRDPS R+SGV N+ +K L ++D A+ + FS FG
Sbjct: 62 DAEKALDQAGVK-LGTKHIRIAKIQRDPSKRRSGVTNIVVKKLPSTVDTYALKEMFSKFG 120
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ + +A DE+G S+GY + +E EE+A +++ ++NG+ ++ + V ++ P RE++
Sbjct: 121 RLTAIGLATDEKGESRGYARISYEKEESAVEAVRELNGVSIDDCSITVERYQPH-HREEQ 179
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMN-NDGKSRGFGFVAYESPE 254
L K +TN+Y+KN +DEKLKE+F +G +TS +V + + S GF +VAY + E
Sbjct: 180 L----KQYTNLYVKNLDPSVDDEKLKEVFAKFGEVTSAKVRDLGNNSSVGFAYVAYATHE 235
Query: 255 FAEKAVQAWNGKEV----DGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYV 310
A KAV+ + K +G L V R + + ER +E +R + + +Y NLYV
Sbjct: 236 AAAKAVEELDEKSSTLAKEGMKLSVCRFRSREERQRERERVRRERQQQH-GKYP--NLYV 292
Query: 311 KNLDDSIDDERLRKEFTPFGTITS 334
KN DD++ E+L++ F FG S
Sbjct: 293 KNFDDTVTSEKLKELFERFGETVS 316
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 75/235 (31%), Positives = 125/235 (53%), Gaps = 24/235 (10%)
Query: 104 SLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEE 162
S+ + ++++ LD +++ + +YD F G + S +V D S GYG+V+F+
Sbjct: 2 SVFPTASPSIWVGGLDPNLNEQKLYDHFVRVGPVASVRVCVDTVTQKSLGYGYVNFQNPA 61
Query: 163 AANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKE 222
A K++++ G+ L +K + + K I R ++ G TN+ +K + LKE
Sbjct: 62 DAEKALDQA-GVKLGTKHIRIAK-IQRDPSKRRSG-----VTNIVVKKLPSTVDTYALKE 114
Query: 223 MFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKK 281
MF +G +T+ + ++ G+SRG+ ++YE E A +AV+ NG +D + V R Q
Sbjct: 115 MFSKFGRLTAIGLATDEKGESRGYARISYEKEESAVEAVRELNGVSIDDCSITVERYQPH 174
Query: 282 AERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
R ++LK Q NLYVKNLD S+DDE+L++ F FG +TSAK
Sbjct: 175 -HREEQLK--------------QYTNLYVKNLDPSVDDEKLKEVFAKFGEVTSAK 214
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 101/192 (52%), Gaps = 14/192 (7%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
N+++KNLD S+D++ + + F+ FG + S KV +S G+ +V + T EAA K++E++
Sbjct: 185 NLYVKNLDPSVDDEKLKEVFAKFGEVTSAKVRDLGNNSSVGFAYVAYATHEAAAKAVEEL 244
Query: 172 N---------GMLLNSKIVFVGKFIPRKEREKELGEKAKL--FTNVYIKNFGEDFNDEKL 220
+ GM L+ + R+ + + + N+Y+KNF + EKL
Sbjct: 245 DEKSSTLAKEGMKLSVCRFRSREERQRERERVRRERQQQHGKYPNLYVKNFDDTVTSEKL 304
Query: 221 KEMFEPYGTITSYRVMNNDGK--SRGFGFVAYESPEFAEKAVQAWNGKEVDG-KILYVGR 277
KE+FE +G S VM + SR FGFV+++ A +A+Q +G G + L+V
Sbjct: 305 KELFERFGETVSVSVMMDKATQVSRCFGFVSFKEQSAASQAIQELHGSTALGPRPLFVTY 364
Query: 278 AQKKAERTQELK 289
A +K R Q L+
Sbjct: 365 ALRKDARRQTLE 376
>gi|389595175|ref|XP_003722810.1| poly(A)-binding protein 2 [Leishmania major strain Friedlin]
gi|323364038|emb|CBZ13044.1| poly(A)-binding protein 2 [Leishmania major strain Friedlin]
Length = 594
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 94/265 (35%), Positives = 148/265 (55%), Gaps = 15/265 (5%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D E+ALD L R +RI QRDPS R+SGV N+ +K L KS+D A+ + FS FG
Sbjct: 61 DAEKALDQAG-SKLGSRYLRIAKIQRDPSKRRSGVNNILVKKLPKSVDTYALKEMFSKFG 119
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ + +A DE+G S+GY + FE EE+A ++ +++GM ++ + + V ++ + +
Sbjct: 120 RLTAIGLACDEKGESRGYARISFEREESAVDAVREMDGMEMDGQAIVVERY-----QAQH 174
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRV--MNNDGKSRGFGFVAYESP 253
E K FTN+Y+KN DEKL+ F YG ++S +V + G G+VA++
Sbjct: 175 RDELLKQFTNLYVKNLDPAVTDEKLRAFFAKYGEVSSAKVRDLGAAQSEAGLGYVAFQKH 234
Query: 254 EFAEKAVQAWNGKEVD----GKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLY 309
E A +AV+ NGKE + G L V R + + ER ++ +R+ + ++Y NLY
Sbjct: 235 ENAARAVEELNGKECEIAKAGSPLDVSRFRSREERQRDRERQRRERAQQH-SKYP--NLY 291
Query: 310 VKNLDDSIDDERLRKEFTPFGTITS 334
VK DD++ ERL + F +G S
Sbjct: 292 VKGFDDTVTSERLEELFQRYGETVS 316
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 71/227 (31%), Positives = 120/227 (52%), Gaps = 24/227 (10%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGN-SKGYGFVHFETEEAANKSIEK 170
++++ LD + + +YD F G + S +V D S GYG+V+F+ A K++++
Sbjct: 9 SIWVGGLDPDLQEQKLYDYFVRIGPVTSVRVCVDSATQKSLGYGYVNFQDPADAEKALDQ 68
Query: 171 VNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTI 230
G L S+ + + K I R ++ G N+ +K + + LKEMF +G +
Sbjct: 69 A-GSKLGSRYLRIAK-IQRDPSKRRSG-----VNNILVKKLPKSVDTYALKEMFSKFGRL 121
Query: 231 TSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELK 289
T+ + ++ G+SRG+ +++E E A AV+ +G E+DG+ + V R Q +
Sbjct: 122 TAIGLACDEKGESRGYARISFEREESAVDAVREMDGMEMDGQAIVVERYQAQ-------- 173
Query: 290 RRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
R E+LK Q NLYVKNLD ++ DE+LR F +G ++SAK
Sbjct: 174 HRDELLK-------QFTNLYVKNLDPAVTDEKLRAFFAKYGEVSSAK 213
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 121/240 (50%), Gaps = 17/240 (7%)
Query: 75 LDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAF 134
+D R +D M D R RD L++ N+++KNLD ++ ++ + F+ +
Sbjct: 149 VDAVREMDGMEMDGQAIVVERYQAQHRDELLKQ--FTNLYVKNLDPAVTDEKLRAFFAKY 206
Query: 135 GSILSCKVAQDEQGNSK-GYGFVHFETEEAANKSIEKVNG----MLLNSKIVFVGKFIPR 189
G + S KV S+ G G+V F+ E A +++E++NG + + V +F R
Sbjct: 207 GEVSSAKVRDLGAAQSEAGLGYVAFQKHENAARAVEELNGKECEIAKAGSPLDVSRFRSR 266
Query: 190 KEREKELGEKAKL-------FTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DG 240
+ER+++ + + + N+Y+K F + E+L+E+F+ YG S VM + G
Sbjct: 267 EERQRDRERQRRERAQQHSKYPNLYVKGFDDTVTSERLEELFQRYGETVSVTVMMDKETG 326
Query: 241 KSRGFGFVAYESPEFAEKAVQAWNGKE-VDGKILYVGRAQKKAERTQELKRRFEMLKIER 299
SR FGFV+ + A +A+Q NG + + L+V A +K R Q L+ R + ++ +
Sbjct: 327 VSRCFGFVSMKDQNAASQAIQELNGSTFLSPRPLFVTYALRKDARRQNLEERSKQFRVRQ 386
>gi|344250403|gb|EGW06507.1| Polyadenylate-binding protein 1 [Cricetulus griseus]
Length = 101
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 72/103 (69%), Positives = 86/103 (83%), Gaps = 4/103 (3%)
Query: 84 MNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVA 143
MN D +KG+P+ IMWSQRDPSL KSG NVFI+N+DKSIDNKA+YDTFSAFG+ILS KV
Sbjct: 1 MNIDVVKGKPVPIMWSQRDPSLGKSGGRNVFIQNVDKSIDNKALYDTFSAFGNILSGKVV 60
Query: 144 QDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKF 186
DE G S+GYGFVHF+T+EAA IEK++G+LLN VFVG+F
Sbjct: 61 CDENG-SQGYGFVHFKTQEAA---IEKMDGVLLNDCKVFVGRF 99
Score = 44.3 bits (103), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 55/96 (57%), Gaps = 7/96 (7%)
Query: 184 GKFIP--RKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDGK 241
GK +P +R+ LG+ NV+I+N + +++ L + F +G I S +V+ ++
Sbjct: 8 GKPVPIMWSQRDPSLGKSGG--RNVFIQNVDKSIDNKALYDTFSAFGNILSGKVVCDENG 65
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGR 277
S+G+GFV +++ E A++ +G ++ ++VGR
Sbjct: 66 SQGYGFVHFKT---QEAAIEKMDGVLLNDCKVFVGR 98
>gi|401429856|ref|XP_003879410.1| putative poly(a) binding protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322495660|emb|CBZ30966.1| putative poly(a) binding protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 594
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 94/265 (35%), Positives = 148/265 (55%), Gaps = 15/265 (5%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D E+ALD L R +RI QRDPS R+SGV N+ +K L KS+D A+ + FS FG
Sbjct: 61 DAEKALDQAG-SKLGSRYLRIAKIQRDPSKRRSGVNNILVKKLPKSVDTYALKEMFSKFG 119
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ + +A DE+G S+GY + FE EE+A ++ +++GM ++ + + V ++ + +
Sbjct: 120 RLTAIGLACDEKGESRGYARISFEREESAVDAVREMDGMEMDGQAIVVERY-----QAQH 174
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRV--MNNDGKSRGFGFVAYESP 253
E K FTN+Y+KN DEKL+ F YG ++S +V + G G+VA++
Sbjct: 175 RDELLKQFTNLYVKNLDPAVTDEKLRAFFAKYGEVSSAKVRDLGAVQSEAGLGYVAFQKH 234
Query: 254 EFAEKAVQAWNGKEVD----GKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLY 309
E A +AV+ NGKE + G L V R + + ER ++ +R+ + ++Y NLY
Sbjct: 235 EDAARAVEELNGKECEIAKAGSPLDVSRFRSREERQRDRERQRRERAQQH-SKYP--NLY 291
Query: 310 VKNLDDSIDDERLRKEFTPFGTITS 334
VK DD++ ERL + F +G S
Sbjct: 292 VKGFDDTVTSERLEELFQRYGETVS 316
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 71/227 (31%), Positives = 120/227 (52%), Gaps = 24/227 (10%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGN-SKGYGFVHFETEEAANKSIEK 170
++++ LD + + +YD F G + S +V D S GYG+V+F+ A K++++
Sbjct: 9 SIWVGGLDPDLQEQKLYDYFVRIGPVTSVRVCVDSATQKSLGYGYVNFQDPADAEKALDQ 68
Query: 171 VNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTI 230
G L S+ + + K I R ++ G N+ +K + + LKEMF +G +
Sbjct: 69 A-GSKLGSRYLRIAK-IQRDPSKRRSG-----VNNILVKKLPKSVDTYALKEMFSKFGRL 121
Query: 231 TSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELK 289
T+ + ++ G+SRG+ +++E E A AV+ +G E+DG+ + V R Q +
Sbjct: 122 TAIGLACDEKGESRGYARISFEREESAVDAVREMDGMEMDGQAIVVERYQAQ-------- 173
Query: 290 RRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
R E+LK Q NLYVKNLD ++ DE+LR F +G ++SAK
Sbjct: 174 HRDELLK-------QFTNLYVKNLDPAVTDEKLRAFFAKYGEVSSAK 213
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 121/240 (50%), Gaps = 17/240 (7%)
Query: 75 LDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAF 134
+D R +D M D R RD L++ N+++KNLD ++ ++ + F+ +
Sbjct: 149 VDAVREMDGMEMDGQAIVVERYQAQHRDELLKQ--FTNLYVKNLDPAVTDEKLRAFFAKY 206
Query: 135 GSILSCKVAQDEQGNSK-GYGFVHFETEEAANKSIEKVNG----MLLNSKIVFVGKFIPR 189
G + S KV S+ G G+V F+ E A +++E++NG + + V +F R
Sbjct: 207 GEVSSAKVRDLGAVQSEAGLGYVAFQKHEDAARAVEELNGKECEIAKAGSPLDVSRFRSR 266
Query: 190 KEREKELGEKAKL-------FTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DG 240
+ER+++ + + + N+Y+K F + E+L+E+F+ YG S VM + G
Sbjct: 267 EERQRDRERQRRERAQQHSKYPNLYVKGFDDTVTSERLEELFQRYGETVSVTVMMDKETG 326
Query: 241 KSRGFGFVAYESPEFAEKAVQAWNGKE-VDGKILYVGRAQKKAERTQELKRRFEMLKIER 299
SR FGFV+ + A +A+Q NG + + L+V A +K R Q L+ R + ++ +
Sbjct: 327 VSRCFGFVSMKDQNAASQAIQELNGSTFLSPRPLFVTYALRKDARRQNLEERSKQFRVRQ 386
>gi|429963232|gb|ELA42776.1| hypothetical protein VICG_00091 [Vittaforma corneae ATCC 50505]
Length = 528
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 85/275 (30%), Positives = 145/275 (52%), Gaps = 18/275 (6%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D +R ++ N+ L R + +M ++ N+F+KN+ K K +Y+ F FG
Sbjct: 103 DAKRIVEKYNYTTLHDREMTLMILTSGNVFPENA--NLFVKNIPKEYTTKKLYEIFKDFG 160
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKF--IPRKERE 193
SI SCKV+ D G S+GYGFV +ET E+A+K+I + K + + +F R ++
Sbjct: 161 SIASCKVSVDSNGESRGYGFVQYETVESADKAIADLRDEKFEGKTLSISRFDRSLRDQKH 220
Query: 194 KELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITS-YRVMNNDGKSRGFGFVAYES 252
+ FTNV++KNF + KLK++ E YG I S Y +N + GF V +E
Sbjct: 221 SDSSSSTSSFTNVFVKNFPSSLTEAKLKDILEKYGPICSIYLPLNEKSEPVGFACVNFEK 280
Query: 253 PEFAEKAVQAWNGKEV-------DGKI----LYVGRAQKKAERTQELKRRFEMLKIERLN 301
E A KAV+ + K + D + Y+ +A+++ ER + ++++ E L ++ +N
Sbjct: 281 AEDAAKAVENLHNKHIFSLEECQDSSVATCPFYIQKAERRKEREETIRKQLEALSLKGIN 340
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
NLY+ ++ ++ ++ +R F+ FGTI S K
Sbjct: 341 SKN--NLYIAHIPETFSEDEIRDLFSKFGTIVSIK 373
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 90/189 (47%), Gaps = 27/189 (14%)
Query: 152 GYGFVHFETEEAANKSIEKVNGMLLNSK-----IVFVGKFIPRKEREKELGEKAKLFTNV 206
Y FV F + E A + +EK N L+ + I+ G P N+
Sbjct: 92 SYAFVTFLSIEDAKRIVEKYNYTTLHDREMTLMILTSGNVFPEN-------------ANL 138
Query: 207 YIKNFGEDFNDEKLKEMFEPYGTITSYRV-MNNDGKSRGFGFVAYESPEFAEKAVQAWNG 265
++KN +++ +KL E+F+ +G+I S +V ++++G+SRG+GFV YE+ E A+KA+
Sbjct: 139 FVKNIPKEYTTKKLYEIFKDFGSIASCKVSVDSNGESRGYGFVQYETVESADKAIADLRD 198
Query: 266 KEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKE 325
++ +GK L + R + + N++VKN S+ + +L+
Sbjct: 199 EKFEGKTLSISRFDRSLRDQKHSDSSSSTSSF--------TNVFVKNFPSSLTEAKLKDI 250
Query: 326 FTPFGTITS 334
+G I S
Sbjct: 251 LEKYGPICS 259
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 100/196 (51%), Gaps = 20/196 (10%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NVF+KN S+ + D +G I S + +E+ G+ V+FE E A K++E +
Sbjct: 232 NVFVKNFPSSLTEAKLKDILEKYGPICSIYLPLNEKSEPVGFACVNFEKAEDAAKAVENL 291
Query: 172 NGMLL-------NSKIV----FVGKFIPRKEREKELGEKAKLFT--------NVYIKNFG 212
+ + +S + ++ K RKERE+ + ++ + + N+YI +
Sbjct: 292 HNKHIFSLEECQDSSVATCPFYIQKAERRKEREETIRKQLEALSLKGINSKNNLYIAHIP 351
Query: 213 EDFNDEKLKEMFEPYGTITSYRVMNNDGK-SRGFGFVAYESPEFAEKAVQAWNGKEVDGK 271
E F++++++++F +GTI S ++ + ++ FG++ +++PE A A +A +G +D
Sbjct: 352 ETFSEDEIRDLFSKFGTIVSIKLQKTSSENNKQFGYICFKTPEEAAAAFEAMDGTLLDNS 411
Query: 272 ILYVGRAQKKAERTQE 287
L + + K ER E
Sbjct: 412 KLRISFYKAKNERRAE 427
>gi|146101854|ref|XP_001469222.1| poly(A)-binding protein 2 [Leishmania infantum JPCM5]
gi|398023673|ref|XP_003864998.1| poly(a) binding protein, putative [Leishmania donovani]
gi|134073591|emb|CAM72325.1| poly(A)-binding protein 2 [Leishmania infantum JPCM5]
gi|322503234|emb|CBZ38319.1| poly(a) binding protein, putative [Leishmania donovani]
Length = 585
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 94/265 (35%), Positives = 148/265 (55%), Gaps = 15/265 (5%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D E+ALD L R +RI QRDPS R+SGV N+ +K L KS+D A+ + FS FG
Sbjct: 61 DAEKALDQAG-SKLGSRYLRIAKIQRDPSKRRSGVNNILVKKLPKSVDTYALKEMFSKFG 119
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ + +A DE+G S+GY + FE EE+A ++ +++GM ++ + + V ++ + +
Sbjct: 120 RLTAIGLACDEKGESRGYARISFEREESAVDAVREMDGMEMDGQAIVVERY-----QAQH 174
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRV--MNNDGKSRGFGFVAYESP 253
E K FTN+Y+KN DEKL+ F YG ++S +V + G G+VA++
Sbjct: 175 RDELLKQFTNLYVKNLDPAVTDEKLRAFFAKYGEVSSAKVRDLGAVQSEAGLGYVAFQKH 234
Query: 254 EFAEKAVQAWNGKEVD----GKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLY 309
E A +AV+ NGKE + G L V R + + ER ++ +R+ + ++Y NLY
Sbjct: 235 EDAARAVEELNGKECEISKAGSPLDVSRFRSREERQRDRERQRRERAQQH-SKYP--NLY 291
Query: 310 VKNLDDSIDDERLRKEFTPFGTITS 334
VK DD++ ERL + F +G S
Sbjct: 292 VKGFDDTVTSERLEELFQRYGETVS 316
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 71/227 (31%), Positives = 120/227 (52%), Gaps = 24/227 (10%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGN-SKGYGFVHFETEEAANKSIEK 170
++++ LD + + +YD F G + S +V D S GYG+V+F+ A K++++
Sbjct: 9 SIWVGGLDPDLQEQKLYDYFVRIGPVTSVRVCVDSATQKSLGYGYVNFQDPADAEKALDQ 68
Query: 171 VNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTI 230
G L S+ + + K I R ++ G N+ +K + + LKEMF +G +
Sbjct: 69 A-GSKLGSRYLRIAK-IQRDPSKRRSG-----VNNILVKKLPKSVDTYALKEMFSKFGRL 121
Query: 231 TSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELK 289
T+ + ++ G+SRG+ +++E E A AV+ +G E+DG+ + V R Q +
Sbjct: 122 TAIGLACDEKGESRGYARISFEREESAVDAVREMDGMEMDGQAIVVERYQAQ-------- 173
Query: 290 RRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
R E+LK Q NLYVKNLD ++ DE+LR F +G ++SAK
Sbjct: 174 HRDELLK-------QFTNLYVKNLDPAVTDEKLRAFFAKYGEVSSAK 213
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 121/240 (50%), Gaps = 17/240 (7%)
Query: 75 LDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAF 134
+D R +D M D R RD L++ N+++KNLD ++ ++ + F+ +
Sbjct: 149 VDAVREMDGMEMDGQAIVVERYQAQHRDELLKQ--FTNLYVKNLDPAVTDEKLRAFFAKY 206
Query: 135 GSILSCKVAQDEQGNSK-GYGFVHFETEEAANKSIEKVNG----MLLNSKIVFVGKFIPR 189
G + S KV S+ G G+V F+ E A +++E++NG + + V +F R
Sbjct: 207 GEVSSAKVRDLGAVQSEAGLGYVAFQKHEDAARAVEELNGKECEISKAGSPLDVSRFRSR 266
Query: 190 KEREKELGEKAKL-------FTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DG 240
+ER+++ + + + N+Y+K F + E+L+E+F+ YG S VM + G
Sbjct: 267 EERQRDRERQRRERAQQHSKYPNLYVKGFDDTVTSERLEELFQRYGETVSVTVMMDKETG 326
Query: 241 KSRGFGFVAYESPEFAEKAVQAWNGKE-VDGKILYVGRAQKKAERTQELKRRFEMLKIER 299
SR FGFV+ + A +A+Q NG + + L+V A +K R Q L+ R + ++ +
Sbjct: 327 VSRCFGFVSMKDQNAASQAIQELNGSTFLSPRPLFVTYALRKDARRQNLEERSKQFRVRQ 386
>gi|52221255|gb|AAU29548.1| poly(A)-binding protein [Crithidia fasciculata]
Length = 564
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 96/265 (36%), Positives = 151/265 (56%), Gaps = 15/265 (5%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D E+ALD L R +RI QRDPS R+SGV N+ +K L KS+D A+ + F +G
Sbjct: 61 DAEKALDQAG-AKLGTRFLRIAKIQRDPSKRRSGVNNILVKKLPKSVDTFALKEMFGKYG 119
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ + +A DE+G S+GY + FE EE+A ++++++GM ++ + + V ++ + +
Sbjct: 120 RLTAIGLACDERGESRGYARISFEREESAVDAVKEMDGMEMDGQAIVVERY-----QAQH 174
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMN-NDGKSR-GFGFVAYESP 253
E K FTN+Y+KN D KL+ F YG ++S +V + D +S GFG+VA+E
Sbjct: 175 RDEMLKQFTNLYVKNLEPTVTDSKLRAFFAKYGEVSSAKVRDLGDAQSEVGFGYVAFEKH 234
Query: 254 EFAEKAVQAWNGKEVD----GKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLY 309
E A KAV+ NGKE + G L V R + + ER ++ +R+ + ++Y NLY
Sbjct: 235 EDAAKAVEELNGKECEIAKAGAPLDVSRFRSREERQRDRERQRRERAQQH-SKYP--NLY 291
Query: 310 VKNLDDSIDDERLRKEFTPFGTITS 334
VK DD++ ERL + F +G S
Sbjct: 292 VKGFDDTVTSERLEELFQRYGETVS 316
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 120/227 (52%), Gaps = 24/227 (10%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGN-SKGYGFVHFETEEAANKSIEK 170
++++ LD ++ + +YD F G + S +V D S GYG+V+F+ A K++++
Sbjct: 9 SIWVGGLDPELNEQKLYDYFVRIGPVASVRVCVDSATQKSLGYGYVNFQDPSDAEKALDQ 68
Query: 171 VNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTI 230
G L ++ + + K I R ++ G N+ +K + + LKEMF YG +
Sbjct: 69 A-GAKLGTRFLRIAK-IQRDPSKRRSG-----VNNILVKKLPKSVDTFALKEMFGKYGRL 121
Query: 231 TSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELK 289
T+ + ++ G+SRG+ +++E E A AV+ +G E+DG+ + V R Q +
Sbjct: 122 TAIGLACDERGESRGYARISFEREESAVDAVKEMDGMEMDGQAIVVERYQAQ-------- 173
Query: 290 RRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
R EMLK Q NLYVKNL+ ++ D +LR F +G ++SAK
Sbjct: 174 HRDEMLK-------QFTNLYVKNLEPTVTDSKLRAFFAKYGEVSSAK 213
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/249 (28%), Positives = 124/249 (49%), Gaps = 18/249 (7%)
Query: 75 LDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAF 134
+D + +D M D R RD L++ N+++KNL+ ++ + + F+ +
Sbjct: 149 VDAVKEMDGMEMDGQAIVVERYQAQHRDEMLKQ--FTNLYVKNLEPTVTDSKLRAFFAKY 206
Query: 135 GSILSCKVAQDEQGNSK-GYGFVHFETEEAANKSIEKVNG----MLLNSKIVFVGKFIPR 189
G + S KV S+ G+G+V FE E A K++E++NG + + V +F R
Sbjct: 207 GEVSSAKVRDLGDAQSEVGFGYVAFEKHEDAAKAVEELNGKECEIAKAGAPLDVSRFRSR 266
Query: 190 KEREKELGEKAKL-------FTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMN--NDG 240
+ER+++ + + + N+Y+K F + E+L+E+F+ YG S VM + G
Sbjct: 267 EERQRDRERQRRERAQQHSKYPNLYVKGFDDTVTSERLEELFQRYGETVSVTVMTDKDTG 326
Query: 241 KSRGFGFVAYESPEFAEKAVQAWNGKE-VDGKILYVGRAQKKAERTQELKRRFEMLKIER 299
SR FGFV+ + A A+Q NG + + L+V A +K R Q L+ R + ++ R
Sbjct: 327 MSRCFGFVSMKDQGAASHAIQDLNGSTFLSPRPLFVTYALRKDARRQNLEERSKQFRM-R 385
Query: 300 LNRYQGVNL 308
N G N+
Sbjct: 386 QNPMNGPNM 394
>gi|14571650|emb|CAC42811.1| Poly(A)-binding protein cytoplasmic 5 [Cricetulus griseus]
Length = 177
Score = 140 bits (353), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 65/108 (60%), Positives = 86/108 (79%), Gaps = 1/108 (0%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D E AL+TMNFD + G+P R+MWSQ D LRKSGVGN+FIK+LDKSIDN+ ++ FSAFG
Sbjct: 71 DAEWALNTMNFDLINGKPFRLMWSQPDDRLRKSGVGNIFIKHLDKSIDNRTLFYLFSAFG 130
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFV 183
+ILSCKV D+ G SKGY +VHF++ AAN++I +NG+ LN++ V+V
Sbjct: 131 NILSCKVVCDDNG-SKGYAYVHFDSLAAANRAIWHMNGVWLNNRQVYV 177
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 80/162 (49%), Gaps = 7/162 (4%)
Query: 115 IKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSK-GYGFVHFETEEAANKSIEKVNG 173
+ +L + +Y F G + ++ +D +S GYG+V+F A ++ +N
Sbjct: 22 VGDLGPEVTEDMLYKKFRPAGPLRFTRICRDPVTHSPLGYGYVNFRFPADAEWALNTMNF 81
Query: 174 MLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSY 233
L+N K F + +R ++ G N++IK+ + ++ L +F +G I S
Sbjct: 82 DLINGK-PFRLMWSQPDDRLRKSG-----VGNIFIKHLDKSIDNRTLFYLFSAFGNILSC 135
Query: 234 RVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYV 275
+V+ +D S+G+ +V ++S A +A+ NG ++ + +YV
Sbjct: 136 KVVCDDNGSKGYAYVHFDSLAAANRAIWHMNGVWLNNRQVYV 177
Score = 45.8 bits (107), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 58/131 (44%), Gaps = 18/131 (13%)
Query: 208 IKNFGEDFNDEKLKEMFEPYGTITSYRVMNND--GKSRGFGFVAYESPEFAEKAVQAWNG 265
+ + G + ++ L + F P G + R+ + G+G+V + P AE A+ N
Sbjct: 22 VGDLGPEVTEDMLYKKFRPAGPLRFTRICRDPVTHSPLGYGYVNFRFPADAEWALNTMNF 81
Query: 266 KEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKE 325
++GK + +Q +RL + N+++K+LD SID+ L
Sbjct: 82 DLINGKPFRLMWSQPD----------------DRLRKSGVGNIFIKHLDKSIDNRTLFYL 125
Query: 326 FTPFGTITSAK 336
F+ FG I S K
Sbjct: 126 FSAFGNILSCK 136
>gi|162605986|ref|XP_001713508.1| polyadenylate-binding protein [Guillardia theta]
gi|13794428|gb|AAK39803.1|AF165818_11 polyadenylate-binding protein [Guillardia theta]
Length = 389
Score = 140 bits (353), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 86/237 (36%), Positives = 136/237 (57%), Gaps = 15/237 (6%)
Query: 57 CHQLGSGAILVQLGQPYML-----DTERALDTMNFDA---LKGRPIRIMWSQRDPSLRKS 108
C + SG LG Y+ ++AL+ MNF + L PIRIMW + S+RKS
Sbjct: 36 CKDIFSGN---SLGYSYVYFNSYSSAKKALNDMNFYSDTELFKTPIRIMWKNNNNSIRKS 92
Query: 109 GVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSI 168
G GN+FIKNL + K ++ FS +G ILS K+ D +G+S GYGFVH++ + A +I
Sbjct: 93 GYGNLFIKNLPYNFSPKDLHSLFSEYGEILSSKIKYDNEGSSLGYGFVHYKEMKDAISAI 152
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEK-LKEMFEPY 227
+NG L+++K++ V F+ + +RE+ LFTN+Y+KN D EK + +F +
Sbjct: 153 NNLNGKLISNKMITVKHFLNKSQRERI--SSCDLFTNIYVKNLPVDKLSEKVIFNLFGVF 210
Query: 228 GTITSYRV-MNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAE 283
G ITS + + + +GF ++ +E+ E AE+A+ N +++ GK L V +A K +
Sbjct: 211 GKITSIFIPLWYNSIPKGFAYINFENHEDAEEAIITMNNRKIAGKSLIVCKAINKIK 267
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 94/195 (48%), Gaps = 27/195 (13%)
Query: 147 QGNSKGYGFVHFETEEAANKSIEKVNGM----LLNSKIVFVGKFIPRKEREKELGEKAKL 202
GNS GY +V+F + +A K++ +N L + I + K R+ G
Sbjct: 41 SGNSLGYSYVYFNSYSSAKKALNDMNFYSDTELFKTPIRIMWKNNNNSIRKSGYG----- 95
Query: 203 FTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRV-MNNDGKSRGFGFVAYESPEFAEKAVQ 261
N++IKN +F+ + L +F YG I S ++ +N+G S G+GFV Y+ + A A+
Sbjct: 96 --NLFIKNLPYNFSPKDLHSLFSEYGEILSSKIKYDNEGSSLGYGFVHYKEMKDAISAIN 153
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQ-GVNLYVKNLD-DSIDD 319
NGK + K++ V K++R ER++ N+YVKNL D + +
Sbjct: 154 NLNGKLISNKMITVKHFLNKSQR-------------ERISSCDLFTNIYVKNLPVDKLSE 200
Query: 320 ERLRKEFTPFGTITS 334
+ + F FG ITS
Sbjct: 201 KVIFNLFGVFGKITS 215
>gi|295414050|gb|ADG08184.1| cytoplasmic poly(A) binding protein, partial [Schmidtea
mediterranea]
Length = 491
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 74/120 (61%), Positives = 89/120 (74%), Gaps = 2/120 (1%)
Query: 219 KLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGR 277
KL+EMF +G ITS +VM + +GKS+GFGFV ++ E AE AV+A NGK + LYVGR
Sbjct: 9 KLREMFLEFGEITSAKVMIDENGKSKGFGFVCFKDSETAESAVKALNGKMFKDRQLYVGR 68
Query: 278 AQKKAERTQELKRRFEMLKIERLNRY-QGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
AQKK ER EL+ FE + ER +RY QGVNLYVKNLDDSIDD RL++EF FG ITSAK
Sbjct: 69 AQKKNERLDELRSHFEKQRAERSSRYTQGVNLYVKNLDDSIDDTRLKQEFVVFGNITSAK 128
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 69/190 (36%), Positives = 111/190 (58%), Gaps = 16/190 (8%)
Query: 127 MYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKF 186
+ + F FG I S KV DE G SKG+GFV F+ E A +++ +NG + + ++VG+
Sbjct: 10 LREMFLEFGEITSAKVMIDENGKSKGFGFVCFKDSETAESAVKALNGKMFKDRQLYVGRA 69
Query: 187 IPRKER--------EKELGEKAKLFT---NVYIKNFGEDFNDEKLKEMFEPYGTITSYRV 235
+ ER EK+ E++ +T N+Y+KN + +D +LK+ F +G ITS +V
Sbjct: 70 QKKNERLDELRSHFEKQRAERSSRYTQGVNLYVKNLDDSIDDTRLKQEFVVFGNITSAKV 129
Query: 236 M-NNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEM 294
M +++ +S+GFGFV + +PE A KAV NGK K LYV AQ+K +R L ++
Sbjct: 130 MTDSNNRSKGFGFVCFSNPEEATKAVTEMNGKICGSKPLYVALAQRKEDRKAHLASQY-- 187
Query: 295 LKIERLNRYQ 304
++R+N ++
Sbjct: 188 --MQRVNPHR 195
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 65/133 (48%), Gaps = 1/133 (0%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
N+++KNLD SID+ + F FG+I S KV D SKG+GFV F E A K++ ++
Sbjct: 99 NLYVKNLDDSIDDTRLKQEFVVFGNITSAKVMTDSNNRSKGFGFVCFSNPEEATKAVTEM 158
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG-TI 230
NG + SK ++V +++R+ L + N + N+ + L P G +I
Sbjct: 159 NGKICGSKPLYVALAQRKEDRKAHLASQYMQRVNPHRNNYPNQVSVNTLISGGPPGGPSI 218
Query: 231 TSYRVMNNDGKSR 243
Y N R
Sbjct: 219 LPYAFAPNASTPR 231
>gi|405946351|gb|EKC17616.1| Polyadenylate-binding protein 4 [Crassostrea gigas]
Length = 199
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 83/197 (42%), Positives = 119/197 (60%), Gaps = 15/197 (7%)
Query: 155 FVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLF----------T 204
FE EAA K++E +NG KI++V ER+ EL EK +
Sbjct: 1 MASFEDPEAAEKAVEALNGNDNAGKIIYVRCDQKEIERQAELKEKFQRIRMERINRYQGV 60
Query: 205 NVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGKSRGFGFVAYESPEFAEKAVQAW 263
N+Y+KN ++ +D +L++ F +GTITS +VM DG+S+GFGFV + SPE A KA+
Sbjct: 61 NLYVKNLADNIDDVRLRKEFAQFGTITSAKVMTTEDGRSKGFGFVCFRSPEEAAKAIVEM 120
Query: 264 NGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIER-LNRYQ---GVNLYVKNLDDSIDD 319
N K ++ + LYV AQKK +R +L ++ R + ++ GVNL++KNLD SIDD
Sbjct: 121 NEKLIEARPLYVALAQKKQDRKAQLASQYMQRTSSRDMPEHRIGPGVNLFIKNLDKSIDD 180
Query: 320 ERLRKEFTPFGTITSAK 336
E+LR+EF+ FGTITSAK
Sbjct: 181 EKLREEFSQFGTITSAK 197
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/145 (35%), Positives = 83/145 (57%), Gaps = 15/145 (10%)
Query: 106 RKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAAN 165
R GV N+++KNL +ID+ + F+ FG+I S KV E G SKG+GFV F + E A
Sbjct: 56 RYQGV-NLYVKNLADNIDDVRLRKEFAQFGTITSAKVMTTEDGRSKGFGFVCFRSPEEAA 114
Query: 166 KSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFT--------------NVYIKNF 211
K+I ++N L+ ++ ++V +++R+ +L + T N++IKN
Sbjct: 115 KAIVEMNEKLIEARPLYVALAQKKQDRKAQLASQYMQRTSSRDMPEHRIGPGVNLFIKNL 174
Query: 212 GEDFNDEKLKEMFEPYGTITSYRVM 236
+ +DEKL+E F +GTITS +V+
Sbjct: 175 DKSIDDEKLREEFSQFGTITSAKVV 199
>gi|402697285|gb|AFQ90830.1| polyA-binding protein cytoplasmic 1, partial [Deirochelys
reticularia]
Length = 106
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 68/103 (66%), Positives = 85/103 (82%), Gaps = 1/103 (0%)
Query: 150 SKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIK 209
SKGYGFVHFET+EA ++IEK+NGMLLN + VFVG+F RKERE ELG +AK FTNVYIK
Sbjct: 2 SKGYGFVHFETQEAXERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIK 61
Query: 210 NFGEDFNDEKLKEMFEPYGTITSYRVMNND-GKSRGFGFVAYE 251
NFGED +DE+LKE+F +G S +VM ++ GKS+GFGFV++E
Sbjct: 62 NFGEDMDDERLKELFGXFGPALSVKVMTDESGKSKGFGFVSFE 104
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 54/95 (56%), Gaps = 10/95 (10%)
Query: 242 SRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLN 301
S+G+GFV +E+ E E+A++ NG ++ + ++VGR + + ER EL R +
Sbjct: 2 SKGYGFVHFETQEAXERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEF------ 55
Query: 302 RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
N+Y+KN + +DDERL++ F FG S K
Sbjct: 56 ----TNVYIKNFGEDMDDERLKELFGXFGPALSVK 86
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 48/88 (54%), Gaps = 6/88 (6%)
Query: 78 ERALDTMNFDALKGRPIRI----MWSQRDPSL--RKSGVGNVFIKNLDKSIDNKAMYDTF 131
ERA++ MN L R + + +R+ L R NV+IKN + +D++ + + F
Sbjct: 17 ERAIEKMNGMLLNDRKVFVGRFKSRKEREAELGARAKEFTNVYIKNFGEDMDDERLKELF 76
Query: 132 SAFGSILSCKVAQDEQGNSKGYGFVHFE 159
FG LS KV DE G SKG+GFV FE
Sbjct: 77 GXFGPALSVKVMTDESGKSKGFGFVSFE 104
>gi|449329878|gb|AGE96146.1| polyadenylate-binding protein 2 [Encephalitozoon cuniculi]
Length = 502
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 94/270 (34%), Positives = 148/270 (54%), Gaps = 18/270 (6%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D ERA+ L R IR+M P GN+F+KNL + K + D FS FG
Sbjct: 65 DAERAIREYKHYELHNRQIRVMKKDERPP----ETGNIFVKNLPEDFTGKDLDDAFSMFG 120
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIE---KVNGMLLNSKIVFVGKFIPRKER 192
I+SCKVA G SKGYGFV F+ ++AA K I+ ++G+LL + V + P + +
Sbjct: 121 EIVSCKVATTSHGKSKGYGFVQFKEKKAAKKVIKNFSSLDGLLLGGNRIVVELYNP-EIK 179
Query: 193 EKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITS-YRVMNNDGKSRGFGFVAYE 251
+ E + + FTN +IKNF D ++ +L E+ E YG +TS + + ++GK +GF F +E
Sbjct: 180 KGESKKTSATFTNCFIKNFPFDASEAELLELLERYGKVTSLFFPVKDNGKPKGFAFANFE 239
Query: 252 SPEFAEKAVQAWN-------GKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQ 304
+ E A A++ + G++ G+ Y+ + Q+K ER +EL++ FE + ++ + +
Sbjct: 240 NHESALNAIKNLHGTFPFGAGRDGTGEAFYIQKGQRKEERAEELRKMFEQMSMQGQSYKK 299
Query: 305 GVNLYVKNLDDSIDDERLRKEFTPFGTITS 334
NLY+ N+ + E L F FG ITS
Sbjct: 300 --NLYITNIPEGFGCEELGSIFKEFGNITS 327
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 103/232 (44%), Gaps = 32/232 (13%)
Query: 85 NFDALKGRPI---RIMWSQRDPSLRK-------SGVGNVFIKNLDKSIDNKAMYDTFSAF 134
NF +L G + RI+ +P ++K + N FIKN + + +
Sbjct: 155 NFSSLDGLLLGGNRIVVELYNPEIKKGESKKTSATFTNCFIKNFPFDASEAELLELLERY 214
Query: 135 GSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLL-------NSKIVFVGKFI 187
G + S + G KG+ F +FE E+A +I+ ++G + ++ K
Sbjct: 215 GKVTSLFFPVKDNGKPKGFAFANFENHESALNAIKNLHGTFPFGAGRDGTGEAFYIQKGQ 274
Query: 188 PRKEREKELGEKAKLF-----------TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRV- 235
++ER +EL K+F N+YI N E F E+L +F+ +G ITS V
Sbjct: 275 RKEERAEEL---RKMFEQMSMQGQSYKKNLYITNIPEGFGCEELGSIFKEFGNITSISVG 331
Query: 236 MNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQE 287
++ + + ++ Y +PE A AV+ N +DG L V + K ER +E
Sbjct: 332 VDGANSQKQYAYICYSTPEEASIAVERGNEIYLDGNRLQVAYFKNKLERMKE 383
Score = 40.8 bits (94), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 54/131 (41%), Gaps = 20/131 (15%)
Query: 206 VYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNG 265
+Y+ D L +F G + S +++ F FV +E+ E AE+A++ +
Sbjct: 16 IYVGELSPKTLDSDLFRVFSNVGKVLSVKLIKRAEPVSSFAFVTFENEEDAERAIREYKH 75
Query: 266 KEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKE 325
E+ + + R KK ER E N++VKNL + + L
Sbjct: 76 YELHNRQI---RVMKKDERPPETG-----------------NIFVKNLPEDFTGKDLDDA 115
Query: 326 FTPFGTITSAK 336
F+ FG I S K
Sbjct: 116 FSMFGEIVSCK 126
>gi|19074720|ref|NP_586226.1| POLYADENYLATE-BINDING PROTEIN 2 [Encephalitozoon cuniculi GB-M1]
gi|74697505|sp|Q8SR30.1|PABP_ENCCU RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|19069362|emb|CAD25830.1| POLYADENYLATE-BINDING PROTEIN 2 [Encephalitozoon cuniculi GB-M1]
Length = 502
Score = 138 bits (347), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 94/270 (34%), Positives = 148/270 (54%), Gaps = 18/270 (6%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D ERA+ L R IR+M P GN+F+KNL + K + D FS FG
Sbjct: 65 DAERAIREYKHYELHNRQIRVMKKDERPP----ETGNIFVKNLPEDFTGKDLDDAFSMFG 120
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIE---KVNGMLLNSKIVFVGKFIPRKER 192
I+SCKVA G SKGYGFV F+ ++AA K I+ ++G+LL + V + P + +
Sbjct: 121 EIVSCKVATTSHGKSKGYGFVQFKEKKAAKKVIKNFSSLDGLLLGGNRIVVELYNP-EIK 179
Query: 193 EKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITS-YRVMNNDGKSRGFGFVAYE 251
+ E + + FTN +IKNF D ++ +L E+ E YG +TS + + ++GK +GF F +E
Sbjct: 180 KGESKKTSATFTNCFIKNFPFDASEAELLELLERYGKVTSLFFPVKDNGKPKGFAFANFE 239
Query: 252 SPEFAEKAVQAWN-------GKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQ 304
+ E A A++ + G++ G+ Y+ + Q+K ER +EL++ FE + ++ + +
Sbjct: 240 NHESALNAIKNLHGTFPFGAGRDGTGEAFYIQKGQRKEERAEELRKMFEQMSMQGQSYKK 299
Query: 305 GVNLYVKNLDDSIDDERLRKEFTPFGTITS 334
NLY+ N+ + E L F FG ITS
Sbjct: 300 --NLYITNIPEGFGCEELGSIFKEFGNITS 327
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 103/232 (44%), Gaps = 32/232 (13%)
Query: 85 NFDALKGRPI---RIMWSQRDPSLRK-------SGVGNVFIKNLDKSIDNKAMYDTFSAF 134
NF +L G + RI+ +P ++K + N FIKN + + +
Sbjct: 155 NFSSLDGLLLGGNRIVVELYNPEIKKGESKKTSATFTNCFIKNFPFDASEAELLELLERY 214
Query: 135 GSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLL-------NSKIVFVGKFI 187
G + S + G KG+ F +FE E+A +I+ ++G + ++ K
Sbjct: 215 GKVTSLFFPVKDNGKPKGFAFANFENHESALNAIKNLHGTFPFGAGRDGTGEAFYIQKGQ 274
Query: 188 PRKEREKELGEKAKLF-----------TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRV- 235
++ER +EL K+F N+YI N E F E+L +F+ +G ITS V
Sbjct: 275 RKEERAEEL---RKMFEQMSMQGQSYKKNLYITNIPEGFGCEELGSIFKEFGNITSISVG 331
Query: 236 MNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQE 287
++ + + ++ Y +PE A AV+ N +DG L V + K ER +E
Sbjct: 332 VDGANSQKQYAYICYSTPEEASIAVERGNEIYLDGNRLQVAYFKNKLERMKE 383
Score = 40.8 bits (94), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 54/131 (41%), Gaps = 20/131 (15%)
Query: 206 VYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNG 265
+Y+ D L +F G + S +++ F FV +E+ E AE+A++ +
Sbjct: 16 IYVGELSPKTLDSDLFRVFSNVGKVLSVKLIKRAEPVSSFAFVTFENEEDAERAIREYKH 75
Query: 266 KEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKE 325
E+ + + R KK ER E N++VKNL + + L
Sbjct: 76 YELHNRQI---RVMKKDERPPETG-----------------NIFVKNLPEDFTGKDLDDA 115
Query: 326 FTPFGTITSAK 336
F+ FG I S K
Sbjct: 116 FSMFGEIVSCK 126
>gi|123407356|ref|XP_001302991.1| Polyadenylate-binding protein [Trichomonas vaginalis G3]
gi|121884332|gb|EAX90061.1| Polyadenylate-binding protein, putative [Trichomonas vaginalis G3]
Length = 477
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 97/270 (35%), Positives = 145/270 (53%), Gaps = 23/270 (8%)
Query: 77 TERALDTMNFDALKGRPIRIMWSQRDPSLR---KSGVGNVFIKNLDKSIDNKAMYDTFSA 133
+RA+ +N+ L G PIRI+WS DP + K+ VG +FI+ LD++I+ ++D FS
Sbjct: 60 AKRAISEVNYTKLDGVPIRILWS--DPGTKRAIKNNVGALFIRGLDENIEVSQLHDAFSN 117
Query: 134 FGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKERE 193
FG I+SCK+ G S+GYGF+ F E+ A ++ + +N K + + +F + R+
Sbjct: 118 FGEIVSCKIPLT-NGKSRGYGFITFYKEDDAKRAKTDLADASINGKPIQI-EFYQKPTRK 175
Query: 194 KELGEKAKLFTNVYIKNFGEDF--NDEKLKEMFEPYGTITSYRVMN------NDGKSRGF 245
+ FTNV+IK D D+ L F+ +G N DG S F
Sbjct: 176 N----PEETFTNVFIKPLPADIFKTDDDLANFFKEFGDFVVTGKANPAIKRKEDGSSCEF 231
Query: 246 GFVAYESPEFAEKAVQAWNGKEVD-GKILY-VGRAQKKAERTQELKRRFEMLKIERLNR- 302
GF ++ E A KAV A NGK+ + GK+ + RAQ KAER L ++ + RLN
Sbjct: 232 GFCNFKHHEDAVKAVDALNGKQHESGKVTFSCCRAQTKAERQAFLAKQSAEFR-RRLNEE 290
Query: 303 YQGVNLYVKNLDDSIDDERLRKEFTPFGTI 332
+G NLYVKN D S+ DE+ ++ F FG +
Sbjct: 291 TRGRNLYVKNFDQSVTDEQFKEYFEQFGEV 320
Score = 81.3 bits (199), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 119/236 (50%), Gaps = 25/236 (10%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLR--KSGVGNVFIKNLDKSI--DNKAMYDTF 131
D +RA + ++ G+PI+I + Q+ P+ + + NVFIK L I + + + F
Sbjct: 146 DAKRAKTDLADASINGKPIQIEFYQK-PTRKNPEETFTNVFIKPLPADIFKTDDDLANFF 204
Query: 132 SAFGSIL-----SCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNS-KIVF-VG 184
FG + + + + E G+S +GF +F+ E A K+++ +NG S K+ F
Sbjct: 205 KEFGDFVVTGKANPAIKRKEDGSSCEFGFCNFKHHEDAVKAVDALNGKQHESGKVTFSCC 264
Query: 185 KFIPRKEREKELGEKAKLFT----------NVYIKNFGEDFNDEKLKEMFEPYGTITSY- 233
+ + ER+ L +++ F N+Y+KNF + DE+ KE FE +G +
Sbjct: 265 RAQTKAERQAFLAKQSAEFRRRLNEETRGRNLYVKNFDQSVTDEQFKEYFEQFGEVEKCS 324
Query: 234 --RVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQE 287
R +S+GFGFV +++ E A+ A++ ++GK Y+G + K ER +E
Sbjct: 325 IRREAQEPHESKGFGFVLFKTKESAQNALENAVITPLNGKTPYIGLFKMKEERERE 380
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 85/179 (47%), Gaps = 12/179 (6%)
Query: 113 VFIKNLDKSIDNKAMYDTFSAFGSILSCKVA-QDEQGNSKGYGFVHFETEEAANKSIEKV 171
VF+ +L S+D + + F +GS S V + + K + FV FE+ E A ++I +V
Sbjct: 8 VFVGDLPGSVDENFIKEIFKDYGSFPSGTVTVKKHKSLDKSFAFVTFESHELAKRAISEV 67
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNV---YIKNFGEDFNDEKLKEMFEPYG 228
N L+ +P + + G K + NV +I+ E+ +L + F +G
Sbjct: 68 NYTKLDG--------VPIRILWSDPGTKRAIKNNVGALFIRGLDENIEVSQLHDAFSNFG 119
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQE 287
I S ++ +GKSRG+GF+ + + A++A ++GK + + QK + E
Sbjct: 120 EIVSCKIPLTNGKSRGYGFITFYKEDDAKRAKTDLADASINGKPIQIEFYQKPTRKNPE 178
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 65/136 (47%), Gaps = 23/136 (16%)
Query: 206 VYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDGKS--RGFGFVAYESPEFAEKAVQAW 263
V++ + ++ +KE+F+ YG+ S V KS + F FV +ES E A++A+
Sbjct: 8 VFVGDLPGSVDENFIKEIFKDYGSFPSGTVTVKKHKSLDKSFAFVTFESHELAKRAISEV 67
Query: 264 NGKEVDG---KILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDE 320
N ++DG +IL+ K+A + G L+++ LD++I+
Sbjct: 68 NYTKLDGVPIRILWSDPGTKRA-----------------IKNNVGA-LFIRGLDENIEVS 109
Query: 321 RLRKEFTPFGTITSAK 336
+L F+ FG I S K
Sbjct: 110 QLHDAFSNFGEIVSCK 125
>gi|170042459|ref|XP_001848942.1| polyadenylate-binding protein [Culex quinquefasciatus]
gi|167866018|gb|EDS29401.1| polyadenylate-binding protein [Culex quinquefasciatus]
Length = 339
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 77/203 (37%), Positives = 114/203 (56%), Gaps = 33/203 (16%)
Query: 131 FSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRK 190
FS+ G++LSCKVA D QG SKGY FV+F +A+ +I++VNG+ +N + V
Sbjct: 2 FSSVGNVLSCKVALDIQGCSKGYAFVYFYATSSAHSAIDRVNGLAVNGASLAV------- 54
Query: 191 EREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDGKSRGFGFVAY 250
+ LFT ++++NFG+ L+E+F PYG+I ++ V KSRG GF+ Y
Sbjct: 55 ---------SPLFTKLHVRNFGDRLTQTTLQELFAPYGSIKAHGV-----KSRGCGFIIY 100
Query: 251 ESPEFAEKAVQAWNGKEV-DGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLY 309
+SPE A A++A NGK + DGK L R ER + RL + V ++
Sbjct: 101 DSPEAAGHALEALNGKALSDGKAL---RVVPVPERV--------LQPAPRLAEGEAVQVF 149
Query: 310 VKNLDDSIDDERLRKEFTPFGTI 332
V+NLD SID+ L + F P+G +
Sbjct: 150 VRNLDASIDNRHLGELFAPYGDV 172
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 92/182 (50%), Gaps = 16/182 (8%)
Query: 113 VFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVN 172
+ ++N + + + F+ +GSI + V S+G GF+ +++ EAA ++E +N
Sbjct: 61 LHVRNFGDRLTQTTLQELFAPYGSIKAHGV------KSRGCGFIIYDSPEAAGHALEALN 114
Query: 173 GMLLNSKIVFVGKFIPRKER----EKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
G L+ + +P ER L E + V+++N ++ L E+F PYG
Sbjct: 115 GKALSDGKAL--RVVPVPERVLQPAPRLAEGEAV--QVFVRNLDASIDNRHLGELFAPYG 170
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYV--GRAQKKAERTQ 286
+ ++ GKS+GFGFV Y S E A +A+ N +EV GK +YV R ++K +
Sbjct: 171 DVQRGFIVKEQGKSKGFGFVTYASGEQAARAIVEMNDREVAGKRIYVVLARGKEKPKPVS 230
Query: 287 EL 288
E+
Sbjct: 231 EV 232
>gi|344253912|gb|EGW10016.1| Polyadenylate-binding protein 4 [Cricetulus griseus]
Length = 99
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 69/103 (66%), Positives = 83/103 (80%), Gaps = 6/103 (5%)
Query: 84 MNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVA 143
MN D KG+PI IM SQR PSLRKSGVGNVF+KN+DKSIDNKA+YDTFSAFG+ILSCKV
Sbjct: 1 MNTDVSKGKPILIMRSQRIPSLRKSGVGNVFMKNVDKSIDNKALYDTFSAFGNILSCKVV 60
Query: 144 QDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKF 186
DE ++ GFVHF+T+EA +IE ++G+LLN VFVG+F
Sbjct: 61 CDENCSN---GFVHFKTQEA---TIEMMDGVLLNDCKVFVGRF 97
>gi|303391122|ref|XP_003073791.1| polyadenylate-binding protein 2 [Encephalitozoon intestinalis ATCC
50506]
gi|303302939|gb|ADM12431.1| polyadenylate-binding protein 2 [Encephalitozoon intestinalis ATCC
50506]
Length = 410
Score = 134 bits (337), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 92/241 (38%), Positives = 134/241 (55%), Gaps = 18/241 (7%)
Query: 106 RKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAAN 165
R GN+F+KNL ++ +K + D FS FG I SCKVA G SKGYGFV F+ ++AA
Sbjct: 6 RPPETGNIFVKNLPENFTSKDLDDAFSMFGEITSCKVATTSHGKSKGYGFVQFKEKKAAK 65
Query: 166 KSIE---KVNGMLLNSKIVFVGKFIPRKEREKELGEKAK---LFTNVYIKNFGEDFNDEK 219
K I+ +NG++L + V + P E + GE K +FTN +IKNF D +E
Sbjct: 66 KVIKNFNNLNGLMLGENKIVVELYNP----EMKKGENKKTPTMFTNCFIKNFPVDVEEEN 121
Query: 220 LKEMFEPYGTITS-YRVMNNDGKSRGFGFVAYESPEFAEKAVQAWN-----GKEVDGKIL 273
L+E+ E YG +TS + DGK +GF F +ES E A A++ + G G+
Sbjct: 122 LRELLEKYGKVTSLFFPTKEDGKPKGFAFANFESHECALNAIKNLHETFPFGDGESGEPF 181
Query: 274 YVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTIT 333
Y+ + Q+K ER +EL++ FE L ++ + + NLY+ N+ + E L F FG IT
Sbjct: 182 YIQKGQRKEERAEELRKTFEQLSMQGQSYKK--NLYITNIPEGFGAEELNNIFREFGNIT 239
Query: 334 S 334
S
Sbjct: 240 S 240
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 106/227 (46%), Gaps = 24/227 (10%)
Query: 85 NFDALKGRPI---RIMWSQRDPSLRK-------SGVGNVFIKNLDKSIDNKAMYDTFSAF 134
NF+ L G + +I+ +P ++K + N FIKN ++ + + + +
Sbjct: 70 NFNNLNGLMLGENKIVVELYNPEMKKGENKKTPTMFTNCFIKNFPVDVEEENLRELLEKY 129
Query: 135 GSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVN-----GMLLNSKIVFVGKFIPR 189
G + S E G KG+ F +FE+ E A +I+ ++ G + + ++ K +
Sbjct: 130 GKVTSLFFPTKEDGKPKGFAFANFESHECALNAIKNLHETFPFGDGESGEPFYIQKGQRK 189
Query: 190 KEREKELGEKAKLFT--------NVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDGK 241
+ER +EL + + + N+YI N E F E+L +F +G ITS V +
Sbjct: 190 EERAEELRKTFEQLSMQGQSYKKNLYITNIPEGFGAEELNNIFREFGNITSMSVGTDGAN 249
Query: 242 S-RGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQE 287
S + + +V Y +PE A AV+ N +DG L V + K ER +E
Sbjct: 250 SQKQYAYVCYSTPEEASIAVERGNEIYLDGNRLQVAYFKNKLERMKE 296
>gi|47229360|emb|CAF99348.1| unnamed protein product [Tetraodon nigroviridis]
Length = 128
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 62/78 (79%), Positives = 67/78 (85%), Gaps = 2/78 (2%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP D ERALDTMNFD +KGRP+RIMWSQRDPSLRKSGVGN+FIKNLDKSI
Sbjct: 53 GYAYVNFQQP--ADAERALDTMNFDVIKGRPVRIMWSQRDPSLRKSGVGNIFIKNLDKSI 110
Query: 123 DNKAMYDTFSAFGSILSC 140
DNKA+YDTFSAFG+ILSC
Sbjct: 111 DNKALYDTFSAFGNILSC 128
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 63/136 (46%), Gaps = 20/136 (14%)
Query: 203 FTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAV 260
++Y+ + D + L E F P G I S RV + +S G+ +V ++ P AE+A+
Sbjct: 10 MASLYVGDLHPDVTEAMLYEKFSPAGAILSIRVCRDMITRRSLGYAYVNFQQPADAERAL 69
Query: 261 QAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGV-NLYVKNLDDSIDD 319
N + G+ + + +Q+ R GV N+++KNLD SID+
Sbjct: 70 DTMNFDVIKGRPVRIMWSQRDPSL-----------------RKSGVGNIFIKNLDKSIDN 112
Query: 320 ERLRKEFTPFGTITSA 335
+ L F+ FG I S
Sbjct: 113 KALYDTFSAFGNILSC 128
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 67/132 (50%), Gaps = 7/132 (5%)
Query: 102 DPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFET 160
+PS + ++++ +L + +Y+ FS G+ILS +V +D S GY +V+F+
Sbjct: 2 NPSAASYPMASLYVGDLHPDVTEAMLYEKFSPAGAILSIRVCRDMITRRSLGYAYVNFQQ 61
Query: 161 EEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKL 220
A ++++ +N ++ + V I +R+ L + N++IKN + +++ L
Sbjct: 62 PADAERALDTMNFDVIKGRPV----RIMWSQRDPSLRKSG--VGNIFIKNLDKSIDNKAL 115
Query: 221 KEMFEPYGTITS 232
+ F +G I S
Sbjct: 116 YDTFSAFGNILS 127
>gi|402466517|gb|EJW01988.1| hypothetical protein EDEG_03560 [Edhazardia aedis USNM 41457]
Length = 571
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 73/186 (39%), Positives = 113/186 (60%), Gaps = 4/186 (2%)
Query: 79 RALDTMNFDALKGRPIRIMWSQRDPSLRKSGVG--NVFIKNLDKSIDNKAMYDTFSAFGS 136
+A+ +NF L G IR+M + +L+ +G N+ +KNL S DNK +YDTFS FG
Sbjct: 64 KAVQNLNFAELHGTQIRVMLYNKQKNLKGQKIGKYNIIVKNLPVSCDNKTLYDTFSVFGD 123
Query: 137 ILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKEL 196
I+S KVA D + KG+GFV ++ + + K+I +G +N ++ V KF+ +++R E
Sbjct: 124 IISSKVAVDSENKPKGFGFVCYKDKMSVKKAILLAHGTNMNGNMLKVAKFLRKEDRVVEK 183
Query: 197 GEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGKSRGFGFVAYESPEF 255
+ +LFTN YIKNFG ++E+LKE+ YG ITS+ V N D +GF F ++
Sbjct: 184 DKIEELFTNCYIKNFG-GLSEEQLKEICANYGEITSFVVPRNADNSLKGFAFCNFKDHVS 242
Query: 256 AEKAVQ 261
A+KA++
Sbjct: 243 AKKAIE 248
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 116/226 (51%), Gaps = 19/226 (8%)
Query: 113 VFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKG---YGFVHFETEEAANKSIE 169
V++ +L+ + ++ FS G++LS K+ + S G Y +V++E + A K+++
Sbjct: 8 VYVGDLNPLTLDTDLHRLFSTQGTVLSIKMIHNPNLESTGSLCYAYVNYENSDCALKAVQ 67
Query: 170 KVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGT 229
+N L+ + V + +K + G+K + N+ +KN +++ L + F +G
Sbjct: 68 NLNFAELHGTQIRVMLYNKQKNLK---GQKIGKY-NIIVKNLPVSCDNKTLYDTFSVFGD 123
Query: 230 ITSYRV-MNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S +V ++++ K +GFGFV Y+ +KA+ +G ++G +L V + +K +R
Sbjct: 124 IISSKVAVDSENKPKGFGFVCYKDKMSVKKAILLAHGTNMNGNMLKVAKFLRKEDRV--- 180
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITS 334
E KIE L N Y+KN + +E+L++ +G ITS
Sbjct: 181 ---VEKDKIEEL----FTNCYIKNF-GGLSEEQLKEICANYGEITS 218
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 64/135 (47%), Gaps = 18/135 (13%)
Query: 206 VYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDG----KSRGFGFVAYESPEFAEKAVQ 261
VY+ + D L +F GT+ S ++++N S + +V YE+ + A KAVQ
Sbjct: 8 VYVGDLNPLTLDTDLHRLFSTQGTVLSIKMIHNPNLESTGSLCYAYVNYENSDCALKAVQ 67
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDER 321
N E+ G + V K+ LK +++ +Y N+ VKNL S D++
Sbjct: 68 NLNFAELHGTQIRVMLYNKQKN-----------LKGQKIGKY---NIIVKNLPVSCDNKT 113
Query: 322 LRKEFTPFGTITSAK 336
L F+ FG I S+K
Sbjct: 114 LYDTFSVFGDIISSK 128
Score = 45.4 bits (106), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 73/155 (47%), Gaps = 15/155 (9%)
Query: 159 ETEEAANKSIEKVNGMLLNSKIVFVGKF-IPRKEREKELGEKAKLFT------------N 205
++ E+ N S +N N KI V F I R + +E E K F N
Sbjct: 335 KSNESTNSS--DLNAAFENLKITTVENFYIQRAQTRQERHEFLKEFIKKAAEENLSYKRN 392
Query: 206 VYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNG 265
+YI +++ + E+F +GTIT++++ ++ F ++ Y++PE A A++ N
Sbjct: 393 LYITTLPPTASEKDVLEIFSKHGTITNFKLKSDINTGLKFCYICYKTPEEALIALERGNE 452
Query: 266 KEVDGKILYVGRAQKKAERTQELKRRFEMLKIERL 300
+DG L V + K ER ++ + E K+ +L
Sbjct: 453 TILDGHKLNVSFFKTKKERQEDKIAKIEPNKLVQL 487
>gi|74762343|sp|Q6NV95.1|PAB1L_HUMAN RecName: Full=Putative protein PABPC1-like; AltName:
Full=Polyadenylate-binding protein pseudogene 2
gi|158258146|dbj|BAF85046.1| unnamed protein product [Homo sapiens]
Length = 269
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/166 (45%), Positives = 102/166 (61%), Gaps = 24/166 (14%)
Query: 171 VNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTI 230
++GMLLN VFVG+F KE+E ELG +AK + K+ G
Sbjct: 1 MDGMLLNGLNVFVGRFRSPKEQEAELGARAK---------------ESKV-------GPA 38
Query: 231 TSYRVMNNDG-KSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELK 289
+S +V+ ++G KS+GFGFV++E E + A+ NGKE G Y+ A KK E ELK
Sbjct: 39 SSVKVITDEGGKSKGFGFVSFERHEDPQTAMDV-NGKEFSGNQTYICLAPKKVEEQTELK 97
Query: 290 RRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSA 335
+FE +K +R+ RYQG N+ VKNLD+SIDDERL+KEF+PFG I SA
Sbjct: 98 CKFEQMKQDRITRYQGANVCVKNLDESIDDERLQKEFSPFGIINSA 143
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/172 (37%), Positives = 87/172 (50%), Gaps = 13/172 (7%)
Query: 132 SAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRK- 190
S G S KV DE G SKG+GFV FE E +++ VNG + ++ P+K
Sbjct: 33 SKVGPASSVKVITDEGGKSKGFGFVSFERHEDPQTAMD-VNGKEFSGNQTYIC-LAPKKV 90
Query: 191 EREKELGEKAKLF----------TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDG 240
E + EL K + NV +KN E +DE+L++ F P+G I S VM G
Sbjct: 91 EEQTELKCKFEQMKQDRITRYQGANVCVKNLDESIDDERLQKEFSPFGIINSANVMMEGG 150
Query: 241 KSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRF 292
S+ FGFV + SPE KAV A NGK V K L+V AQ K +R ++
Sbjct: 151 CSKRFGFVCFSSPEEVAKAVTAMNGKIVASKPLHVALAQCKEQRLAHFTNQY 202
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 55/102 (53%), Gaps = 8/102 (7%)
Query: 111 GNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEK 170
NV +KNLD+SID++ + FS FG I S V E G SK +GFV F + E K++
Sbjct: 114 ANVCVKNLDESIDDERLQKEFSPFGIINSANVMM-EGGCSKRFGFVCFSSPEEVAKAVTA 172
Query: 171 VNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFG 212
+NG ++ SK + V + +E+ L FTN Y++
Sbjct: 173 MNGKIVASKPLHVAL---AQCKEQRLAH----FTNQYMQKMA 207
>gi|56971379|gb|AAH88337.1| Pabpc4 protein, partial [Rattus norvegicus]
Length = 415
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 58/79 (73%), Positives = 70/79 (88%)
Query: 258 KAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSI 317
KAV+ NGKE+ GK ++VGRAQKK ER ELKR+FE LK ER++RYQGVNLY+KNLDD+I
Sbjct: 1 KAVEEMNGKEMSGKSIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTI 60
Query: 318 DDERLRKEFTPFGTITSAK 336
DDE+LRKEF+PFG+ITSAK
Sbjct: 61 DDEKLRKEFSPFGSITSAK 79
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/137 (42%), Positives = 84/137 (61%), Gaps = 10/137 (7%)
Query: 166 KSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDF 215
K++E++NG ++ K +FVG+ + ER+ EL K + N+YIKN +
Sbjct: 1 KAVEEMNGKEMSGKSIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTI 60
Query: 216 NDEKLKEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYV 275
+DEKL++ F P+G+ITS +VM DG+S+GFGFV + SPE A KAV NG+ V K LYV
Sbjct: 61 DDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYV 120
Query: 276 GRAQKKAERTQELKRRF 292
AQ+K ER L ++
Sbjct: 121 ALAQRKEERKAHLTNQY 137
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 64/104 (61%), Gaps = 9/104 (8%)
Query: 106 RKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAAN 165
R GV N++IKNLD +ID++ + FS FGSI S KV E G SKG+GFV F + E A
Sbjct: 45 RYQGV-NLYIKNLDDTIDDEKLRKEFSPFGSITSAKV-MLEDGRSKGFGFVCFSSPEEAT 102
Query: 166 KSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIK 209
K++ ++NG ++ SK ++V ++ER+ L TN Y++
Sbjct: 103 KAVTEMNGRIVGSKPLYVALAQRKEERKAHL-------TNQYMQ 139
>gi|432114066|gb|ELK36113.1| Polyadenylate-binding protein 1 [Myotis davidii]
Length = 230
Score = 127 bits (319), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 64/123 (52%), Positives = 88/123 (71%), Gaps = 1/123 (0%)
Query: 215 FNDEKLKEMFEPYGTITSYRVMNNDG-KSRGFGFVAYESPEFAEKAVQAWNGKEVDGKIL 273
+DE+LK++F +G S +VM ++G S+GFGFV+++ E +KAV NGKE++ K +
Sbjct: 1 MDDERLKDLFGKFGPALSVKVMMDEGGTSKGFGFVSFKRHEDTQKAVDEVNGKELNRKQI 60
Query: 274 YVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTIT 333
Y+ RA K AE EL+ +FE + +R RYQGVNLYVKNLDD ID+ L+KEF+PFGTIT
Sbjct: 61 YISRAHKTAEWQTELRCKFEHMNQDRATRYQGVNLYVKNLDDGIDEGCLQKEFSPFGTIT 120
Query: 334 SAK 336
AK
Sbjct: 121 GAK 123
Score = 120 bits (301), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 69/181 (38%), Positives = 99/181 (54%), Gaps = 10/181 (5%)
Query: 122 IDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIV 181
+D++ + D F FG LS KV DE G SKG+GFV F+ E K++++VNG LN K +
Sbjct: 1 MDDERLKDLFGKFGPALSVKVMMDEGGTSKGFGFVSFKRHEDTQKAVDEVNGKELNRKQI 60
Query: 182 FVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKLKEMFEPYGTIT 231
++ + E + EL K + N+Y+KN + ++ L++ F P+GTIT
Sbjct: 61 YISRAHKTAEWQTELRCKFEHMNQDRATRYQGVNLYVKNLDDGIDEGCLQKEFSPFGTIT 120
Query: 232 SYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRR 291
+ M G S GFGFV + SPE A KAV NG+ V K L V AQ+K ER L +
Sbjct: 121 GAKFMMEGGPSEGFGFVRFSSPEEATKAVTEMNGRIVATKPLCVALAQRKEERQAHLTNQ 180
Query: 292 F 292
+
Sbjct: 181 Y 181
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 75/154 (48%), Gaps = 26/154 (16%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQR-----------------DPSLRKSGVGNVFIKNL 118
DT++A+D +N L + I I + + D + R GV N+++KNL
Sbjct: 42 DTQKAVDEVNGKELNRKQIYISRAHKTAEWQTELRCKFEHMNQDRATRYQGV-NLYVKNL 100
Query: 119 DKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNS 178
D ID + FS FG+I K E G S+G+GFV F + E A K++ ++NG ++ +
Sbjct: 101 DDGIDEGCLQKEFSPFGTITGAKFMM-EGGPSEGFGFVRFSSPEEATKAVTEMNGRIVAT 159
Query: 179 KIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFG 212
K + V ++ER+ L TN Y++
Sbjct: 160 KPLCVALAQRKEERQAHL-------TNQYMQRMA 186
>gi|78070599|gb|AAI06909.1| PABPC4 protein [Homo sapiens]
Length = 281
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 56/73 (76%), Positives = 67/73 (91%)
Query: 264 NGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLR 323
NGKE+ GKI++VGRAQKK ER ELKR+FE LK ER++RYQGVNLY+KNLDD+IDDE+LR
Sbjct: 2 NGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLR 61
Query: 324 KEFTPFGTITSAK 336
KEF+PFG+ITSAK
Sbjct: 62 KEFSPFGSITSAK 74
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 57/132 (43%), Positives = 80/132 (60%), Gaps = 10/132 (7%)
Query: 171 VNGMLLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKL 220
+NG ++ KI+FVG+ + ER+ EL K + N+YIKN + +DEKL
Sbjct: 1 MNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKL 60
Query: 221 KEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
++ F P+G+ITS +VM DG+S+GFGFV + SPE A KAV NG+ V K LYV AQ+
Sbjct: 61 RKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQR 120
Query: 281 KAERTQELKRRF 292
K ER L ++
Sbjct: 121 KEERKAHLTNQY 132
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 64/104 (61%), Gaps = 9/104 (8%)
Query: 106 RKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAAN 165
R GV N++IKNLD +ID++ + FS FGSI S KV E G SKG+GFV F + E A
Sbjct: 40 RYQGV-NLYIKNLDDTIDDEKLRKEFSPFGSITSAKVML-EDGRSKGFGFVCFSSPEEAT 97
Query: 166 KSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIK 209
K++ ++NG ++ SK ++V ++ER+ L TN Y++
Sbjct: 98 KAVTEMNGRIVGSKPLYVALAQRKEERKAHL-------TNQYMQ 134
>gi|110002613|gb|AAI18569.1| PABPC4 protein [Homo sapiens]
Length = 252
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 56/73 (76%), Positives = 67/73 (91%)
Query: 264 NGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLR 323
NGKE+ GKI++VGRAQKK ER ELKR+FE LK ER++RYQGVNLY+KNLDD+IDDE+LR
Sbjct: 2 NGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKLR 61
Query: 324 KEFTPFGTITSAK 336
KEF+PFG+ITSAK
Sbjct: 62 KEFSPFGSITSAK 74
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 57/132 (43%), Positives = 80/132 (60%), Gaps = 10/132 (7%)
Query: 171 VNGMLLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKL 220
+NG ++ KI+FVG+ + ER+ EL K + N+YIKN + +DEKL
Sbjct: 1 MNGKEISGKIIFVGRAQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEKL 60
Query: 221 KEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
++ F P+G+ITS +VM DG+S+GFGFV + SPE A KAV NG+ V K LYV AQ+
Sbjct: 61 RKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQR 120
Query: 281 KAERTQELKRRF 292
K ER L ++
Sbjct: 121 KEERKAHLTNQY 132
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 64/104 (61%), Gaps = 9/104 (8%)
Query: 106 RKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAAN 165
R GV N++IKNLD +ID++ + FS FGSI S KV E G SKG+GFV F + E A
Sbjct: 40 RYQGV-NLYIKNLDDTIDDEKLRKEFSPFGSITSAKV-MLEDGRSKGFGFVCFSSPEEAT 97
Query: 166 KSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIK 209
K++ ++NG ++ SK ++V ++ER+ L TN Y++
Sbjct: 98 KAVTEMNGRIVGSKPLYVALAQRKEERKAHL-------TNQYMQ 134
>gi|119612220|gb|EAW91814.1| poly(A) binding protein, cytoplasmic 1, isoform CRA_a [Homo
sapiens]
Length = 287
Score = 124 bits (311), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 57/73 (78%), Positives = 65/73 (89%)
Query: 264 NGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLR 323
NGKE++GK +YVGRAQKK ER ELKR+FE +K +R+ RYQGVNLYVKNLDD IDDERLR
Sbjct: 2 NGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLR 61
Query: 324 KEFTPFGTITSAK 336
KEF+PFGTITSAK
Sbjct: 62 KEFSPFGTITSAK 74
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 55/132 (41%), Positives = 78/132 (59%), Gaps = 10/132 (7%)
Query: 171 VNGMLLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKL 220
+NG LN K ++VG+ + ER+ EL K + N+Y+KN + +DE+L
Sbjct: 1 MNGKELNGKQIYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERL 60
Query: 221 KEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
++ F P+GTITS +VM G+S+GFGFV + SPE A KAV NG+ V K LYV AQ+
Sbjct: 61 RKEFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATKPLYVALAQR 120
Query: 281 KAERTQELKRRF 292
K ER L ++
Sbjct: 121 KEERQAHLTNQY 132
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 63/107 (58%), Gaps = 9/107 (8%)
Query: 106 RKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAAN 165
R GV N+++KNLD ID++ + FS FG+I S KV E G SKG+GFV F + E A
Sbjct: 40 RYQGV-NLYVKNLDDGIDDERLRKEFSPFGTITSAKVMM-EGGRSKGFGFVCFSSPEEAT 97
Query: 166 KSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFG 212
K++ ++NG ++ +K ++V ++ER+ L TN Y++
Sbjct: 98 KAVTEMNGRIVATKPLYVALAQRKEERQAHL-------TNQYMQRMA 137
>gi|269859758|ref|XP_002649603.1| poly(A)-binding protein [Enterocytozoon bieneusi H348]
gi|220066966|gb|EED44435.1| poly(A)-binding protein [Enterocytozoon bieneusi H348]
Length = 484
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 82/274 (29%), Positives = 139/274 (50%), Gaps = 24/274 (8%)
Query: 78 ERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSI 137
+ A+ N+ L G+ I + S D + S N+F+ N+ + K + + F FG +
Sbjct: 73 QEAVQKYNYTMLNGKEILLTIS--DTQFKYSQSANIFVNNIPTDMSAKDLEEIFKNFGPV 130
Query: 138 LSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELG 197
LSCK+++ +G SKGYG+V ++ ++A K++ + +N I+FV + P+K
Sbjct: 131 LSCKISRTSEGKSKGYGYVMYKNLKSAKKAVTNCQNVKINENILFVDFYNPQKSAR---N 187
Query: 198 EKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITS-YRVMNNDGKSRGFGFVAYESPEFA 256
+ K FTN + KNF ++ + +LK + + YG IT+ Y +DGK GF V Y PE A
Sbjct: 188 SENKAFTNCFCKNFPPNYTEAELKNLLKKYGEITTIYFPTKSDGKPVGFACVNYAHPESA 247
Query: 257 EKAVQAWNGKEV--------DGKI----LYVGRAQKKAERTQELKRRF--EMLKIERLNR 302
+A+ + K++ D K Y+ + +KK ER Q LK + + +L R
Sbjct: 248 VRAIDELHNKQIFNNNQMQKDTKFAIEPFYIQKNEKKKEREQILKSFYGNSVGFRNKLKR 307
Query: 303 YQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
NL+++N+ S ++ L + FG IT K
Sbjct: 308 ----NLFIQNVPTSFSEDELLEILKKFGNITDFK 337
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 91/197 (46%), Gaps = 21/197 (10%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
N F KN + + + +G I + G G+ V++ E+A ++I+++
Sbjct: 195 NCFCKNFPPNYTEAELKNLLKKYGEITTIYFPTKSDGKPVGFACVNYAHPESAVRAIDEL 254
Query: 172 --------NGMLLNSKIVFVGKFIPRKEREKE------------LGEKAKLFTNVYIKNF 211
N M ++K +I + E++KE +G + KL N++I+N
Sbjct: 255 HNKQIFNNNQMQKDTKFAIEPFYIQKNEKKKEREQILKSFYGNSVGFRNKLKRNLFIQNV 314
Query: 212 GEDFNDEKLKEMFEPYGTITSYRV-MNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDG 270
F++++L E+ + +G IT +++ ++ + FG+V Y + E A A++ +DG
Sbjct: 315 PTSFSEDELLEILKKFGNITDFKLKLDTLHPEKQFGYVCYSTIEEAAVALEKSKQVLLDG 374
Query: 271 KILYVGRAQKKAERTQE 287
L + + K ER+ E
Sbjct: 375 NQLELSIYKSKYERSTE 391
>gi|320581035|gb|EFW95257.1| polyadenylate-binding protein [Ogataea parapolymorpha DL-1]
Length = 541
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/287 (28%), Positives = 144/287 (50%), Gaps = 39/287 (13%)
Query: 89 LKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQG 148
L+ R I + L+K GN++++ L + + + FS +G+++SCK+ D+ G
Sbjct: 73 LEQRDIEYEHVATEHELKKQLPGNLYVRGLLPTTTSDDLVRIFSRYGALVSCKIIYDDFG 132
Query: 149 NSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYI 208
SKGYGF++F A K+I+ +NG+ ++ +FV I +++R KEL + +TN+Y+
Sbjct: 133 VSKGYGFINFADRIEAQKAIDNLNGVNVDGNHLFVNHHISKRDRLKELEMRKLKYTNLYV 192
Query: 209 KNFGEDFNDEKLKEMFEPYGTITSYRVMNNDG-KSRGFGFVAYESPEFAEKAVQAWNGKE 267
KNF +D EKL ++F YG + S + G +RG+ F+ ++S E A +A + +G E
Sbjct: 193 KNFPDDLTKEKLAQVFGQYGDVESVFLPQGTGNHNRGYAFINFKSHEDAVRAQENLDGFE 252
Query: 268 V-DGKILYVGRAQKKAERTQ-----------ELKRRFEMLKIERLN-------------- 301
+ G L +G+A+++ +R Q + ++ + E N
Sbjct: 253 IAPGYRLQLGKAERRKDRMQNQMNSYKPNYLPFQPQYMPPQPEHSNNLYPSFIVSPDSNL 312
Query: 302 ------------RYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+YQ NLY+ +L D+ L + F PFG I SAK
Sbjct: 313 ISTATGLPIAGPQYQDSNLYIIHLPLEFKDQDLYELFAPFGQIMSAK 359
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 70/310 (22%), Positives = 129/310 (41%), Gaps = 82/310 (26%)
Query: 75 LDTERALDTMNFDALKGRPIRI--MWSQRDP----SLRKSGVGNVFIKNLDKSIDNKAMY 128
++ ++A+D +N + G + + S+RD +RK N+++KN + + +
Sbjct: 146 IEAQKAIDNLNGVNVDGNHLFVNHHISKRDRLKELEMRKLKYTNLYVKNFPDDLTKEKLA 205
Query: 129 DTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGM-------------- 174
F +G + S + Q +++GY F++F++ E A ++ E ++G
Sbjct: 206 QVFGQYGDVESVFLPQGTGNHNRGYAFINFKSHEDAVRAQENLDGFEIAPGYRLQLGKAE 265
Query: 175 --------LLNSK----IVFVGKFIPRKEREKE-------LGEKAKLFT----------- 204
+NS + F +++P + + + L +
Sbjct: 266 RRKDRMQNQMNSYKPNYLPFQPQYMPPQPEHSNNLYPSFIVSPDSNLISTATGLPIAGPQ 325
Query: 205 ----NVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMN---ND-----------------G 240
N+YI + +F D+ L E+F P+G I S ++M ND G
Sbjct: 326 YQDSNLYIIHLPLEFKDQDLYELFAPFGQIMSAKIMTYPPNDSAVIDEGEEDTESKSREG 385
Query: 241 KSRGFGFVAYESPEFAEKAVQAWNGKEV-DGKILYVGRAQKKAERTQELKRRFEMLKIER 299
+SRGFGFV + P A KA+ + NG V D +L V AQ+K + +FE ++
Sbjct: 386 RSRGFGFVCFNKPLDASKALVSMNGYRVDDSHVLEVSFAQRK-------ENKFEKGRLHH 438
Query: 300 LNRYQGVNLY 309
N+ N Y
Sbjct: 439 YNQNHLGNFY 448
Score = 45.1 bits (105), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 59/132 (44%), Gaps = 20/132 (15%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKV-------------------AQDEQGNSKG 152
N++I +L ++ +Y+ F+ FG I+S K+ ++ +G S+G
Sbjct: 330 NLYIIHLPLEFKDQDLYELFAPFGQIMSAKIMTYPPNDSAVIDEGEEDTESKSREGRSRG 389
Query: 153 YGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFG 212
+GFV F A+K++ +NG ++ V F RKE + E G + + ++ NF
Sbjct: 390 FGFVCFNKPLDASKALVSMNGYRVDDSHVLEVSFAQRKENKFEKG-RLHHYNQNHLGNFY 448
Query: 213 EDFNDEKLKEMF 224
N K F
Sbjct: 449 NYLNQNFTKRSF 460
>gi|403372370|gb|EJY86082.1| RNA-binding proteins (RRM domain) [Oxytricha trifallax]
Length = 695
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 133/253 (52%), Gaps = 7/253 (2%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
+ +R L MN L G+ +RI+ S + N+ +KNLDK + + ++D+F FG
Sbjct: 138 EADRCLQDMNNYVLNGQALRIVHSVS--KFDYNPKANLLVKNLDKEVTQQELFDSFKQFG 195
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
I S K+ G+S+GY F+ F++EE A K++ +N + K + + + + RE
Sbjct: 196 DIQSLKLETYPDGSSRGYAFIQFQSEEEAEKALNAMNQAEIKGKKIEINRHEKKATRENP 255
Query: 196 LGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPE 254
K F N+++KN + +D++LK +F +G I S V ++ G + +G+V ++ P+
Sbjct: 256 QQTK---FNNLFVKNLPKGTDDDQLKGLFGKFGEIESVTVQRDEQGNLKDYGYVCFKEPD 312
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLD 314
AE AV N K++D + L V + K + R + + LN+ N+Y+K +
Sbjct: 313 HAEAAVLEMNKKQIDDQFLIVNQHISKKDNEPTQGSRLNPI-TQNLNKTFNSNIYIKFIP 371
Query: 315 DSIDDERLRKEFT 327
+ + +E LRK F+
Sbjct: 372 NEVTEEELRKTFS 384
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 97/184 (52%), Gaps = 22/184 (11%)
Query: 152 GYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNF 211
GYG++ F ++E A++ ++ +N +LN + + + + + + + N+ +KN
Sbjct: 127 GYGYLQFNSKEEADRCLQDMNNYVLNGQALRIVHSVSKFDYNPK--------ANLLVKNL 178
Query: 212 GEDFNDEKLKEMFEPYGTITSYRVMN-NDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDG 270
++ ++L + F+ +G I S ++ DG SRG+ F+ ++S E AEKA+ A N E+ G
Sbjct: 179 DKEVTQQELFDSFKQFGDIQSLKLETYPDGSSRGYAFIQFQSEEEAEKALNAMNQAEIKG 238
Query: 271 KILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFG 330
K + + R +KKA R + +F NL+VKNL DD++L+ F FG
Sbjct: 239 KKIEINRHEKKATRENPQQTKFN-------------NLFVKNLPKGTDDDQLKGLFGKFG 285
Query: 331 TITS 334
I S
Sbjct: 286 EIES 289
Score = 81.6 bits (200), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 108/215 (50%), Gaps = 20/215 (9%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPS---LRKSGVGNVFIKNLDKSIDNKAMYDTFS 132
+ E+AL+ MN +KG+ I I ++ + +++ N+F+KNL K D+ + F
Sbjct: 223 EAEKALNAMNQAEIKGKKIEINRHEKKATRENPQQTKFNNLFVKNLPKGTDDDQLKGLFG 282
Query: 133 AFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKER 192
FG I S V +DEQGN K YG+V F+ + A ++ ++N ++ + + V + I +K+
Sbjct: 283 KFGEIESVTVQRDEQGNLKDYGYVCFKEPDHAEAAVLEMNKKQIDDQFLIVNQHISKKDN 342
Query: 193 EKELGEKAKLFT---------NVYIKNFGEDFNDEKLKEMFEPYGT------ITSY--RV 235
E G + T N+YIK + +E+L++ F +T + ++
Sbjct: 343 EPTQGSRLNPITQNLNKTFNSNIYIKFIPNEVTEEELRKTFSMKDANIVSIKLTKFVKKI 402
Query: 236 MNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDG 270
+ + + F ++ Y++ A+KA+Q ++ V G
Sbjct: 403 EDQEVQPYQFAYILYDTVLGAQKAIQTFDQSTVFG 437
>gi|47229361|emb|CAF99349.1| unnamed protein product [Tetraodon nigroviridis]
Length = 380
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 62/102 (60%), Positives = 73/102 (71%), Gaps = 9/102 (8%)
Query: 235 VMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEM 294
+ ++ GKSRGFGFV++E E A+KA D L QKK ER ELKR+FE
Sbjct: 1 MTDDSGKSRGFGFVSFERHEDAQKA---------DNGFLKENWIQKKVERQAELKRKFEQ 51
Query: 295 LKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+K +R+ RYQGVNLYVKNLDD IDDERLRKEF+PFGTITSAK
Sbjct: 52 MKQDRMTRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAK 93
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/158 (41%), Positives = 90/158 (56%), Gaps = 19/158 (12%)
Query: 145 DEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLF- 203
D+ G S+G+GFV FE E A K+ NG L K ++ K + ER+ EL K +
Sbjct: 3 DDSGKSRGFGFVSFERHEDAQKAD---NGFL---KENWIQKKV---ERQAELKRKFEQMK 53
Query: 204 ---------TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPE 254
N+Y+KN + +DE+L++ F P+GTITS +VM G+S+GFGFV + SPE
Sbjct: 54 QDRMTRYQGVNLYVKNLDDGIDDERLRKEFSPFGTITSAKVMLEGGRSKGFGFVCFSSPE 113
Query: 255 FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRF 292
A KAV NG+ V K LYV AQ+K ER L ++
Sbjct: 114 EATKAVTEMNGRIVATKPLYVALAQRKEERQAHLTNQY 151
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 63/107 (58%), Gaps = 9/107 (8%)
Query: 106 RKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAAN 165
R GV N+++KNLD ID++ + FS FG+I S KV E G SKG+GFV F + E A
Sbjct: 59 RYQGV-NLYVKNLDDGIDDERLRKEFSPFGTITSAKVML-EGGRSKGFGFVCFSSPEEAT 116
Query: 166 KSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFG 212
K++ ++NG ++ +K ++V ++ER+ L TN Y++
Sbjct: 117 KAVTEMNGRIVATKPLYVALAQRKEERQAHL-------TNQYMQRMA 156
>gi|300120548|emb|CBK20102.2| unnamed protein product [Blastocystis hominis]
Length = 534
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 89/270 (32%), Positives = 140/270 (51%), Gaps = 19/270 (7%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
+ E+AL+ NF+ LKG+ +R+M Q + GN+F+KNL + NK + D FSA+G
Sbjct: 42 EAEKALEGANFNILKGKEMRVMRQQLRFKQTCNPKGNLFVKNLPDLMTNKELLDKFSAYG 101
Query: 136 SILSCKVAQD-EQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREK 194
+ILSCKVA D E G S YG+VHF K + +N ++ ++V ++ EK
Sbjct: 102 NILSCKVAFDKETGKSLHYGYVHFSDPNVTQKVLADMNKDVVEEGAMYVMEY------EK 155
Query: 195 ELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITS----YRVMNNDGKSRGFGFVAY 250
+ + + + Y+ NF ++ L+++F YGTI S Y+ N + GFV +
Sbjct: 156 RMKDTSSDWVTCYVANFPTTLTEDGLRDLFGKYGTINSVYIGYKRYN---PQKIQGFVTF 212
Query: 251 ESPEFAEKAVQAWNGKEV-----DGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQG 305
+ + A KAV+ + + + +LYV R Q + ER ++ E K E + R +G
Sbjct: 213 ANHDSAVKAVEGLKDQVITVEGAEPMVLYVNRLQSREERASINQKILEEKKKEEVERTKG 272
Query: 306 VNLYVKNLDDSIDDERLRKEFTPFGTITSA 335
LYV D +I ERLR+ F +G I S
Sbjct: 273 RFLYVGFGDQTITLERLREIFQAYGNIESC 302
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 90/208 (43%), Gaps = 25/208 (12%)
Query: 131 FSAFGSILSCKVAQDEQG-NSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPR 189
F +G + + V D+ S+ YG+V F T E A K++E N +L K + V +
Sbjct: 9 FKKYGKVRATHVVLDKNTKQSRCYGYVDFSTAEEAEKALEGANFNILKGKEMRVMR---- 64
Query: 190 KEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM--NNDGKSRGFGF 247
++ + N+++KN + +++L + F YG I S +V GKS +G+
Sbjct: 65 --QQLRFKQTCNPKGNLFVKNLPDLMTNKELLDKFSAYGNILSCKVAFDKETGKSLHYGY 122
Query: 248 VAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVN 307
V + P +K + N V+ +YV +K+ + T V
Sbjct: 123 VHFSDPNVTQKVLADMNKDVVEEGAMYVMEYEKRMKDTSS----------------DWVT 166
Query: 308 LYVKNLDDSIDDERLRKEFTPFGTITSA 335
YV N ++ ++ LR F +GTI S
Sbjct: 167 CYVANFPTTLTEDGLRDLFGKYGTINSV 194
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 61/119 (51%), Gaps = 18/119 (15%)
Query: 220 LKEMFEPYGTITSYRVM--NNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGR 277
L+E F+ YG + + V+ N +SR +G+V + + E AEKA++ N + GK + V R
Sbjct: 5 LEEEFKKYGKVRATHVVLDKNTKQSRCYGYVDFSTAEEAEKALEGANFNILKGKEMRVMR 64
Query: 278 AQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
Q + ++T K NL+VKNL D + ++ L +F+ +G I S K
Sbjct: 65 QQLRFKQTCNPKG----------------NLFVKNLPDLMTNKELLDKFSAYGNILSCK 107
>gi|354505219|ref|XP_003514669.1| PREDICTED: hypothetical protein LOC100753990 [Cricetulus griseus]
Length = 471
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 60/110 (54%), Positives = 81/110 (73%), Gaps = 5/110 (4%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
++ IKNL K+IDNKA+Y+ FSAFG+ILSCKVA DE+G KGYGFVHF+ +E+A ++I+ +
Sbjct: 300 SILIKNLGKTIDNKALYNIFSAFGNILSCKVACDEKG-PKGYGFVHFQKQESAERAIDAL 358
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLK 221
NGM LN + +FVG+F KERE E G A+ T+ K DF+D +LK
Sbjct: 359 NGMFLNYRKIFVGRFKSHKEREAERGAWARQSTSADFK----DFDDXRLK 404
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 69/132 (52%), Gaps = 7/132 (5%)
Query: 159 ETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEK---AKLFTNVYIKNFGEDF 215
E E AA S E + + ++VG P + E L EK A ++ IKN G+
Sbjct: 255 EEEAAAGGSDENPD---FPTASLYVGDLHP-EVTESMLYEKFSPAGPILSILIKNLGKTI 310
Query: 216 NDEKLKEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYV 275
+++ L +F +G I S +V ++ +G+GFV ++ E AE+A+ A NG ++ + ++V
Sbjct: 311 DNKALYNIFSAFGNILSCKVACDEKGPKGYGFVHFQKQESAERAIDALNGMFLNYRKIFV 370
Query: 276 GRAQKKAERTQE 287
GR + ER E
Sbjct: 371 GRFKSHKEREAE 382
>gi|403331840|gb|EJY64890.1| Polyadenylate-binding protein, putative [Oxytricha trifallax]
Length = 701
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 90/243 (37%), Positives = 124/243 (51%), Gaps = 32/243 (13%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFS-AFGS--ILSCKVAQDEQGNSKGYGFVHFETEEAANK 166
N+FIKNLDKSI ++ + ++FS GS ++S KV+ + S+GYGFV + E A +
Sbjct: 100 ANNLFIKNLDKSITSQQLDESFSKVLGSDVVVSAKVSINADYTSRGYGFVCLSSPELAEQ 159
Query: 167 SIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEP 226
++ + + V F P+ RE K F N+YIKNF +N EK++++F
Sbjct: 160 ALATSDSFKFD-----VHPFNPKDRRELR-----KTFNNIYIKNFPSIWNQEKIEQIFGQ 209
Query: 227 YGTITSYRVMNNDGKSRG------FGFVAYESPEFAE-------KAVQAWNGKEVDGKIL 273
YGTI S + GK +G F FV YE P+ E AV N KE DG L
Sbjct: 210 YGTIKSTFI--KMGKVQGTDQEAPFAFVCYEDPDNKEYGPRCALNAVTQENEKEYDGIKL 267
Query: 274 YVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTIT 333
YV A K ER QE KR K N + NLYVKN ++ +E+L+ F +G I
Sbjct: 268 YVKEALPKKEREQEKKREQNRFK----NSKKRCNLYVKNFPENTTEEQLKAYFEKYGEIE 323
Query: 334 SAK 336
S K
Sbjct: 324 SIK 326
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 129/275 (46%), Gaps = 36/275 (13%)
Query: 32 EGVSRSLSSLIDGNTV---KYDWDSGYTCHQLGSGAILVQLGQPYMLDTERAL---DTMN 85
+ + S S ++ + V K ++ YT G V L P + E+AL D+
Sbjct: 115 QQLDESFSKVLGSDVVVSAKVSINADYTSRGYG----FVCLSSPEL--AEQALATSDSFK 168
Query: 86 FDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQD 145
FD P +R+ LRK+ N++IKN + + + F +G+I S +
Sbjct: 169 FDVHPFNP----KDRRE--LRKT-FNNIYIKNFPSIWNQEKIEQIFGQYGTIKSTFIKMG 221
Query: 146 E-QGNSK--GYGFVHFETEE-------AANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ QG + + FV +E + A ++ + N + ++V + +P+KERE+E
Sbjct: 222 KVQGTDQEAPFAFVCYEDPDNKEYGPRCALNAVTQENEKEYDGIKLYVKEALPKKEREQE 281
Query: 196 LGEKAKLF------TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDGKSRGFGFVA 249
+ F N+Y+KNF E+ +E+LK FE YG I S ++ +G + + FV
Sbjct: 282 KKREQNRFKNSKKRCNLYVKNFPENTTEEQLKAYFEKYGEIESIKLNLKEGAA-VYAFVC 340
Query: 250 YESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAER 284
Y++PE A A Q + ++GK L++ ++K R
Sbjct: 341 YKNPESATYAKQQSQTQTLNGKQLFLNFYEQKEVR 375
>gi|403354844|gb|EJY76981.1| Polyadenylate-binding protein, putative [Oxytricha trifallax]
Length = 590
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 90/243 (37%), Positives = 125/243 (51%), Gaps = 34/243 (13%)
Query: 111 GNVFIKNLDKSIDNKAMYDTFSAF---GSILSCKVAQDEQGNSKGYGFVHFETEEAANKS 167
N+FIKNLDKSI ++ + +TFS ++S KV+ + +S+GYGFV T E A ++
Sbjct: 101 NNLFIKNLDKSITSQQLDETFSKVLGGDVVVSAKVSINADYSSRGYGFVFLATPEQAEQA 160
Query: 168 IEKVNGMLLNSKIVF-VGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEP 226
+ K S+ F V + P+ RE K F N+YIKNF ++N EK++++F
Sbjct: 161 LAKA------SEFKFEVHPYQPKDRREIR-----KTFNNIYIKNFPSNWNKEKIEQIFGQ 209
Query: 227 YGTITSYRVMNNDGKSRG------FGFVAYES-------PEFAEKAVQAWNGKEVDGKIL 273
YGTI S + GK +G F FV YE P+ A A+ N KE DG L
Sbjct: 210 YGTIKSTVI--KMGKVQGTDQEAPFAFVCYEDKDNKEYGPKCALNAINQENDKEYDGIKL 267
Query: 274 YVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTIT 333
YV A K R QE KR K N + NLYVKN ++ +E+L+ F +G I
Sbjct: 268 YVKEALPKTLREQEKKREQNRFK----NSKKRCNLYVKNFPENTTEEQLKAYFEKYGEIE 323
Query: 334 SAK 336
S K
Sbjct: 324 SIK 326
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 100/196 (51%), Gaps = 18/196 (9%)
Query: 105 LRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSK--GYGFVHFETE 161
+RK+ N++IKN + + + + F +G+I S + + QG + + FV +E +
Sbjct: 182 IRKT-FNNIYIKNFPSNWNKEKIEQIFGQYGTIKSTVIKMGKVQGTDQEAPFAFVCYEDK 240
Query: 162 E-------AANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLF------TNVYI 208
+ A +I + N + ++V + +P+ RE+E + F N+Y+
Sbjct: 241 DNKEYGPKCALNAINQENDKEYDGIKLYVKEALPKTLREQEKKREQNRFKNSKKRCNLYV 300
Query: 209 KNFGEDFNDEKLKEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEV 268
KNF E+ +E+LK FE YG I S ++ + +G + + FV Y++PE A A Q + +
Sbjct: 301 KNFPENTTEEQLKAYFEKYGEIESIKLNHKEGAA-VYAFVCYKNPESATYAKQQSQTQTL 359
Query: 269 DGKILYVGRAQKKAER 284
+GK L++ ++K R
Sbjct: 360 NGKQLFLNFYEQKEVR 375
>gi|123445099|ref|XP_001311313.1| Polyadenylate-binding protein [Trichomonas vaginalis G3]
gi|121893117|gb|EAX98383.1| Polyadenylate-binding protein, putative [Trichomonas vaginalis G3]
Length = 419
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/262 (32%), Positives = 134/262 (51%), Gaps = 16/262 (6%)
Query: 79 RALDTMNFDALKGRPIRIMWSQRDPSLR---KSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
RAL +N+ L G PIRI+WS DP+ + K + I +LD+ I+ ++D FS FG
Sbjct: 62 RALLEVNYTKLDGVPIRILWS--DPATKRAIKKDFCTLIIFDLDEYIEAAQLHDIFSNFG 119
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
++SCK+ G +G G+V F EE A + + +N K + + + + E
Sbjct: 120 EVVSCKIPLT-NGKPRGDGYVTFYKEEDAMRVKNDLAQASINGKPIQIVLYCKPTRKNSE 178
Query: 196 LGEKAKLFTNVYIKNFGEDF--NDEKLKEMFEPYGTITSYRV-MNNDGKSRGFGFVAYES 252
+ FTNV+IK + +E L ++ + +G + + N+DG S FGF +
Sbjct: 179 -----ETFTNVFIKPLLVKYFKTNEDLAKLMKDFGEFVNPSIKFNDDGTSSEFGFCNFMY 233
Query: 253 PEFAEKAVQAWNGK-EVDGKILYVG-RAQKKAERTQELKRRFEMLKIERLNRYQGVNLYV 310
+ A KAV++ NGK + G+ +V RAQ KAER L + + +G NLY+
Sbjct: 234 HQDAVKAVESLNGKMHISGEFEFVCCRAQTKAERQAFLAEQSAEFRRRLYEETRGRNLYI 293
Query: 311 KNLDDSIDDERLRKEFTPFGTI 332
KN+D SI+DE + F FG +
Sbjct: 294 KNIDRSINDEEFEEYFKQFGEV 315
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 112/232 (48%), Gaps = 20/232 (8%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKS--GVGNVFIKNLDKSI--DNKAMYDTF 131
D R + + ++ G+PI+I+ + P+ + S NVFIK L N+ +
Sbjct: 146 DAMRVKNDLAQASINGKPIQIVLYCK-PTRKNSEETFTNVFIKPLLVKYFKTNEDLAKLM 204
Query: 132 SAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNG-MLLNSKIVFVG-KFIPR 189
FG ++ + ++ G S +GF +F + A K++E +NG M ++ + FV + +
Sbjct: 205 KDFGEFVNPSIKFNDDGTSSEFGFCNFMYHQDAVKAVESLNGKMHISGEFEFVCCRAQTK 264
Query: 190 KEREKELGEKAKLFT----------NVYIKNFGEDFNDEKLKEMFEPYGTITSY---RVM 236
ER+ L E++ F N+YIKN NDE+ +E F+ +G + R
Sbjct: 265 AERQAFLAEQSAEFRRRLYEETRGRNLYIKNIDRSINDEEFEEYFKQFGEVEKCLISREA 324
Query: 237 NNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
+S+GFGFV +++ E A+ A++ + GKILYV K ER L
Sbjct: 325 QEPHESKGFGFVLFKTKEGAQNALKNTIITPLKGKILYVNYFIMKEEREHIL 376
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 81/178 (45%), Gaps = 10/178 (5%)
Query: 113 VFIKNLDKSIDNKAMYDTFSAFGSILSCKV-AQDEQGNSKGYGFVHFETEEAANKSIEKV 171
+F+ +L +D + + F +G+ S + + + K + FV FE+ E A +++ +V
Sbjct: 8 LFVGDLPGYVDGNFIKELFREYGNFPSGTITVKKHKSLDKSFAFVTFESHELARRALLEV 67
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTIT 231
N L+ + + P +R + K F + I + E +L ++F +G +
Sbjct: 68 NYTKLDGVPIRILWSDPATKRAIK-----KDFCTLIIFDLDEYIEAAQLHDIFSNFGEVV 122
Query: 232 SYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGK----ILYVGRAQKKAERT 285
S ++ +GK RG G+V + E A + ++GK +LY +K +E T
Sbjct: 123 SCKIPLTNGKPRGDGYVTFYKEEDAMRVKNDLAQASINGKPIQIVLYCKPTRKNSEET 180
Score = 44.7 bits (104), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 57/122 (46%), Gaps = 23/122 (18%)
Query: 220 LKEMFEPYGTITSYRVMNNDGKS--RGFGFVAYESPEFAEKAVQAWNGKEVDG---KILY 274
+KE+F YG S + KS + F FV +ES E A +A+ N ++DG +IL+
Sbjct: 22 IKELFREYGNFPSGTITVKKHKSLDKSFAFVTFESHELARRALLEVNYTKLDGVPIRILW 81
Query: 275 VGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITS 334
A K+A +K+ F L + +LD+ I+ +L F+ FG + S
Sbjct: 82 SDPATKRA-----IKKDF-------------CTLIIFDLDEYIEAAQLHDIFSNFGEVVS 123
Query: 335 AK 336
K
Sbjct: 124 CK 125
>gi|147864210|emb|CAN80948.1| hypothetical protein VITISV_016699 [Vitis vinifera]
Length = 183
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 53/84 (63%), Positives = 64/84 (76%), Gaps = 2/84 (2%)
Query: 66 LVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNK 125
V G P DT RALD +NF L G+P RIM+S DPS+RKSG GN+FIKNLDK +D+K
Sbjct: 63 CVNHGNPQ--DTARALDVLNFTLLNGKPTRIMYSHCDPSVRKSGTGNIFIKNLDKRVDHK 120
Query: 126 AMYDTFSAFGSILSCKVAQDEQGN 149
A++DTFSAFG+ILSCKVA D G+
Sbjct: 121 ALHDTFSAFGNILSCKVAADASGS 144
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/126 (21%), Positives = 58/126 (46%), Gaps = 9/126 (7%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQD-EQGNSKGYGFVHFETEEAANKSIEK 170
++++ L+ ++ + ++D F G ++S ++ D S YG V+ + ++++
Sbjct: 19 SLYVGGLESNVTDSHLFDLFGQLGPVVSVQICCDLSTRRSLNYGCVNHGNPQDTARALDV 78
Query: 171 VNGMLLNSKIV-FVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGT 229
+N LLN K + R+ G N++IKN + + + L + F +G
Sbjct: 79 LNFTLLNGKPTRIMYSHCDPSVRKSGTG-------NIFIKNLDKRVDHKALHDTFSAFGN 131
Query: 230 ITSYRV 235
I S +V
Sbjct: 132 ILSCKV 137
>gi|406602053|emb|CCH46373.1| Polyadenylate-binding protein, cytoplasmic and nuclear
[Wickerhamomyces ciferrii]
Length = 694
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 61/182 (33%), Positives = 109/182 (59%), Gaps = 4/182 (2%)
Query: 111 GNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEK 170
GN++++ L I + ++ F FG I S K+ DE G SKGYGF+++ +A+ +I K
Sbjct: 129 GNIYVRGLGPEITTEDLFKIFEPFGEITSSKIVNDEFGRSKGYGFINYSDGSSADDAISK 188
Query: 171 VNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTI 230
+NG+L+N +++ I +KER + + + FTN+YIKN D+ ++ + +F +G I
Sbjct: 189 LNGLLVNGSKLYLNHHIAKKERIQRIDFEKSNFTNLYIKNLPIDYTIDQFESLFAKFGEI 248
Query: 231 TSYRVMN-NDG--KSRGFGFVAYESPEFAEKAVQAWNGKEVD-GKILYVGRAQKKAERTQ 286
+S + + NDG S+ FGF+ +++ E A A+++ N E+ + L V RAQ++ ER +
Sbjct: 249 SSSFLPDLNDGDQTSKRFGFINFKNHESAISAIESLNNFEISPNQFLSVSRAQRRDERNE 308
Query: 287 EL 288
+
Sbjct: 309 QF 310
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 71/132 (53%), Gaps = 11/132 (8%)
Query: 205 NVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAW 263
N+Y++ G + E L ++FEP+G ITS +++N++ G+S+G+GF+ Y A+ A+
Sbjct: 130 NIYVRGLGPEITTEDLFKIFEPFGEITSSKIVNDEFGRSKGYGFINYSDGSSADDAISKL 189
Query: 264 NGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLR 323
NG V+G LY+ K ER Q + FE + NLY+KNL ++
Sbjct: 190 NGLLVNGSKLYLNHHIAKKERIQRID--FE--------KSNFTNLYIKNLPIDYTIDQFE 239
Query: 324 KEFTPFGTITSA 335
F FG I+S+
Sbjct: 240 SLFAKFGEISSS 251
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQA 262
+N+Y++N +D L F P+G I S ++M D G+SRG+GFV + + A +A+ A
Sbjct: 425 SNLYVRNLAPSIDDSILHSSFAPFGIIVSAKIMTTDEGESRGYGFVCFRTSPEASRALIA 484
Query: 263 WNGKEVDGKILYVGRAQKKAER 284
+G + G++L+V AQK ++
Sbjct: 485 MHGNVLHGQMLHVSFAQKNNKK 506
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 50/74 (67%)
Query: 111 GNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEK 170
N++++NL SID+ ++ +F+ FG I+S K+ ++G S+GYGFV F T A++++
Sbjct: 425 SNLYVRNLAPSIDDSILHSSFAPFGIIVSAKIMTTDEGESRGYGFVCFRTSPEASRALIA 484
Query: 171 VNGMLLNSKIVFVG 184
++G +L+ +++ V
Sbjct: 485 MHGNVLHGQMLHVS 498
Score = 42.7 bits (99), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 21/33 (63%)
Query: 304 QGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
Q NLYV+NL SIDD L F PFG I SAK
Sbjct: 423 QPSNLYVRNLAPSIDDSILHSSFAPFGIIVSAK 455
Score = 38.1 bits (87), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 51/97 (52%), Gaps = 7/97 (7%)
Query: 105 LRKSGVGNVFIKNL--DKSIDNKAMYDTFSAFGSILSCKVAQDEQGN--SKGYGFVHFET 160
KS N++IKNL D +ID F+ FG I S + G+ SK +GF++F+
Sbjct: 216 FEKSNFTNLYIKNLPIDYTID--QFESLFAKFGEISSSFLPDLNDGDQTSKRFGFINFKN 273
Query: 161 EEAANKSIEKVNGMLLN-SKIVFVGKFIPRKEREKEL 196
E+A +IE +N ++ ++ + V + R ER ++
Sbjct: 274 HESAISAIESLNNFEISPNQFLSVSRAQRRDERNEQF 310
>gi|218195846|gb|EEC78273.1| hypothetical protein OsI_17967 [Oryza sativa Indica Group]
Length = 1001
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 74/236 (31%), Positives = 119/236 (50%), Gaps = 20/236 (8%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSIEK 170
N+++ NL S+ + + + F FG I+ +V D G S+GYGFV + A+++I++
Sbjct: 298 NLYVGNLPASVGSHKLIELFLPFGQIVRSRVVDDCFTGLSQGYGFVKYSDPRCASEAIKR 357
Query: 171 VNGMLLNSKI--VFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+NG L+ + V V F P E + K +Y+ N N ++L +F P+G
Sbjct: 358 MNGRLVEGRALEVRVAGF-PSSEDNSQQPSKETDMAKLYVCNLSLSMNTDRLIHLFLPFG 416
Query: 229 TITSYRVM--NNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQ 286
+T+ +V + G S+G+GFV Y SP A +AV NG+ VDG+ + V R
Sbjct: 417 EVTNAKVAKDHTTGLSKGYGFVQYSSPHHAAEAVIHLNGRLVDGRKIEV--------RVS 468
Query: 287 ELKRRFEMLKIERLNRYQGV------NLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ +E + + V NLYV N+ SID ++L + F PFG IT A+
Sbjct: 469 GIPSTLPNSAVESPSTTRTVKEIDMSNLYVCNMPSSIDTKKLVELFLPFGKITHAR 524
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 129/273 (47%), Gaps = 28/273 (10%)
Query: 80 ALDTMNFDALKGRPIRIMWS--------QRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTF 131
A+ MN ++GR + + + + PS +++ + +++ NL S++ + F
Sbjct: 354 AIKRMNGRLVEGRALEVRVAGFPSSEDNSQQPS-KETDMAKLYVCNLSLSMNTDRLIHLF 412
Query: 132 SAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSIEKVNGMLLNS-----KIVFVGK 185
FG + + KVA+D G SKGYGFV + + A +++ +NG L++ ++ +
Sbjct: 413 LPFGEVTNAKVAKDHTTGLSKGYGFVQYSSPHHAAEAVIHLNGRLVDGRKIEVRVSGIPS 472
Query: 186 FIPRKEREKELGEKAKL---FTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDG-- 240
+P E + +N+Y+ N + +KL E+F P+G IT RV+ +
Sbjct: 473 TLPNSAVESPSTTRTVKEIDMSNLYVCNMPSSIDTKKLVELFLPFGKITHARVVADPDTF 532
Query: 241 KSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERL 300
++G+GF+ + E A KA+ A NG V G+++ V R L + ++
Sbjct: 533 SAKGYGFIKFTDSESATKAIAAMNGALVGGEMIIV--------RVAGLSPSASISAVQTT 584
Query: 301 NRYQGVNLYVKNLDDSIDDERLRKEFTPFGTIT 333
LY+ NL S+ +++ F PFG IT
Sbjct: 585 QDINKSRLYITNLPRSMTADKMVNLFAPFGQIT 617
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 126/294 (42%), Gaps = 32/294 (10%)
Query: 60 LGSGAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGV--------- 110
L G VQ P+ A+ +N + GR I + S +L S V
Sbjct: 431 LSKGYGFVQYSSPH--HAAEAVIHLNGRLVDGRKIEVRVSGIPSTLPNSAVESPSTTRTV 488
Query: 111 -----GNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQG-NSKGYGFVHFETEEAA 164
N+++ N+ SID K + + F FG I +V D ++KGYGF+ F E+A
Sbjct: 489 KEIDMSNLYVCNMPSSIDTKKLVELFLPFGKITHARVVADPDTFSAKGYGFIKFTDSESA 548
Query: 165 NKSIEKVNGMLLNSK--IVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKE 222
K+I +NG L+ + IV V P + + +YI N +K+
Sbjct: 549 TKAIAAMNGALVGGEMIIVRVAGLSPSASISAVQTTQDINKSRLYITNLPRSMTADKMVN 608
Query: 223 MFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKA 282
+F P+G IT +MN + + V Y A KAVQ +G V+GK L V R++
Sbjct: 609 LFAPFGQITKV-LMNLE-----YSLVWYADAPSAIKAVQHMDGYMVEGKRLVVKRSELCT 662
Query: 283 ERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ + I+ ++ NLYV + S+ +++ F PFG + A+
Sbjct: 663 TNASQAGGK----PIKEIDM---ANLYVGRVPSSLTEDQFIDLFRPFGRVVQAR 709
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 73/137 (53%), Gaps = 15/137 (10%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQ 261
TN+Y+ N KL E+F P+G I RV+++ G S+G+GFV Y P A +A++
Sbjct: 297 TNLYVGNLPASVGSHKLIELFLPFGQIVRSRVVDDCFTGLSQGYGFVKYSDPRCASEAIK 356
Query: 262 AWNGKEVDGKILYVGRA--QKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDD 319
NG+ V+G+ L V A + +Q+ + +M K LYV NL S++
Sbjct: 357 RMNGRLVEGRALEVRVAGFPSSEDNSQQPSKETDMAK-----------LYVCNLSLSMNT 405
Query: 320 ERLRKEFTPFGTITSAK 336
+RL F PFG +T+AK
Sbjct: 406 DRLIHLFLPFGEVTNAK 422
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 114/269 (42%), Gaps = 22/269 (8%)
Query: 79 RALDTMNFDALKGRPIRIMWSQRDPSLRKSGV--------GNVFIKNLDKSIDNKAMYDT 130
+A+ MN + G I + + PS S V ++I NL +S+ M +
Sbjct: 550 KAIAAMNGALVGGEMIIVRVAGLSPSASISAVQTTQDINKSRLYITNLPRSMTADKMVNL 609
Query: 131 FSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRK 190
F+ FG I KV + + Y V + +A K+++ ++G ++ K + V +
Sbjct: 610 FAPFGQIT--KVLMNLE-----YSLVWYADAPSAIKAVQHMDGYMVEGKRLVVKRSELCT 662
Query: 191 EREKELGEKAKL---FTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDGKSRGFGF 247
+ G K N+Y+ +++ ++F P+G + R+ + + +G
Sbjct: 663 TNASQAGGKPIKEIDMANLYVGRVPSSLTEDQFIDLFRPFGRVVQARMF----RFQRYGM 718
Query: 248 VAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVN 307
V +++P A A+ +G ++ G IL V A AE + + N
Sbjct: 719 VRFDNPSCAAAAIDHLDGYQIGGSILAVRVAGLPAESNAAKGALTSQMSSNEQGQIDMTN 778
Query: 308 LYVKNLDDSIDDERLRKEFTPFGTITSAK 336
LYV +L +++ERL F P G IT AK
Sbjct: 779 LYVSHLPSYVNNERLIDLFLPCGQITQAK 807
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 100/227 (44%), Gaps = 34/227 (14%)
Query: 67 VQLGQPYMLDTERA------LDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDK 120
VQ YM++ +R L T N G+PI+ + + N+++ +
Sbjct: 640 VQHMDGYMVEGKRLVVKRSELCTTNASQAGGKPIKEI-----------DMANLYVGRVPS 688
Query: 121 SIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKI 180
S+ D F FG ++ ++ + ++ YG V F+ A +I+ ++G + I
Sbjct: 689 SLTEDQFIDLFRPFGRVVQARMFRFQR-----YGMVRFDNPSCAAAAIDHLDGYQIGGSI 743
Query: 181 VFVG-KFIPRKEREKELGEKAKL---------FTNVYIKNFGEDFNDEKLKEMFEPYGTI 230
+ V +P + + +++ TN+Y+ + N+E+L ++F P G I
Sbjct: 744 LAVRVAGLPAESNAAKGALTSQMSSNEQGQIDMTNLYVSHLPSYVNNERLIDLFLPCGQI 803
Query: 231 TSYRVM--NNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYV 275
T +V+ G S+GFGFV + A A+ NG +DG +L V
Sbjct: 804 TQAKVVVERYTGVSKGFGFVKFADAYSAAVALTHMNGYPLDGHVLEV 850
>gi|90399074|emb|CAJ86296.1| H0124B04.13 [Oryza sativa Indica Group]
Length = 913
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 74/236 (31%), Positives = 119/236 (50%), Gaps = 20/236 (8%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSIEK 170
N+++ NL S+ + + + F FG I+ +V D G S+GYGFV + A+++I++
Sbjct: 210 NLYVGNLPASVGSHKLIELFLPFGQIVRSRVVDDCFTGLSQGYGFVKYSDPRCASEAIKR 269
Query: 171 VNGMLLNSKI--VFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+NG L+ + V V F P E + K +Y+ N N ++L +F P+G
Sbjct: 270 MNGRLVEGRALEVRVAGF-PSSEDNSQQPSKETDMAKLYVCNLSLSMNTDRLIHLFLPFG 328
Query: 229 TITSYRVM--NNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQ 286
+T+ +V + G S+G+GFV Y SP A +AV NG+ VDG+ + V R
Sbjct: 329 EVTNAKVAKDHTTGLSKGYGFVQYSSPHHAAEAVIHLNGRLVDGRKIEV--------RVS 380
Query: 287 ELKRRFEMLKIERLNRYQGV------NLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ +E + + V NLYV N+ SID ++L + F PFG IT A+
Sbjct: 381 GIPSTLPNSAVESPSTTRTVKEIDMSNLYVCNMPSSIDTKKLVELFLPFGKITHAR 436
Score = 100 bits (249), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 129/273 (47%), Gaps = 28/273 (10%)
Query: 80 ALDTMNFDALKGRPIRIMWS--------QRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTF 131
A+ MN ++GR + + + + PS +++ + +++ NL S++ + F
Sbjct: 266 AIKRMNGRLVEGRALEVRVAGFPSSEDNSQQPS-KETDMAKLYVCNLSLSMNTDRLIHLF 324
Query: 132 SAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSIEKVNGMLLNS-----KIVFVGK 185
FG + + KVA+D G SKGYGFV + + A +++ +NG L++ ++ +
Sbjct: 325 LPFGEVTNAKVAKDHTTGLSKGYGFVQYSSPHHAAEAVIHLNGRLVDGRKIEVRVSGIPS 384
Query: 186 FIPRKEREKELGEKAKL---FTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDG-- 240
+P E + +N+Y+ N + +KL E+F P+G IT RV+ +
Sbjct: 385 TLPNSAVESPSTTRTVKEIDMSNLYVCNMPSSIDTKKLVELFLPFGKITHARVVADPDTF 444
Query: 241 KSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERL 300
++G+GF+ + E A KA+ A NG V G+++ V R L + ++
Sbjct: 445 SAKGYGFIKFTDSESATKAIAAMNGALVGGEMIIV--------RVAGLSPSASISAVQTT 496
Query: 301 NRYQGVNLYVKNLDDSIDDERLRKEFTPFGTIT 333
LY+ NL S+ +++ F PFG IT
Sbjct: 497 QDINKSRLYITNLPRSMTADKMVNLFAPFGQIT 529
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 126/294 (42%), Gaps = 32/294 (10%)
Query: 60 LGSGAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGV--------- 110
L G VQ P+ A+ +N + GR I + S +L S V
Sbjct: 343 LSKGYGFVQYSSPH--HAAEAVIHLNGRLVDGRKIEVRVSGIPSTLPNSAVESPSTTRTV 400
Query: 111 -----GNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQG-NSKGYGFVHFETEEAA 164
N+++ N+ SID K + + F FG I +V D ++KGYGF+ F E+A
Sbjct: 401 KEIDMSNLYVCNMPSSIDTKKLVELFLPFGKITHARVVADPDTFSAKGYGFIKFTDSESA 460
Query: 165 NKSIEKVNGMLLNSK--IVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKE 222
K+I +NG L+ + IV V P + + +YI N +K+
Sbjct: 461 TKAIAAMNGALVGGEMIIVRVAGLSPSASISAVQTTQDINKSRLYITNLPRSMTADKMVN 520
Query: 223 MFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKA 282
+F P+G IT +MN + + V Y A KAVQ +G V+GK L V R++
Sbjct: 521 LFAPFGQITKV-LMNLE-----YSLVWYADAPSAIKAVQHMDGYMVEGKRLVVKRSELCT 574
Query: 283 ERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ + I+ ++ NLYV + S+ +++ F PFG + A+
Sbjct: 575 TNASQAGGK----PIKEIDM---ANLYVGRVPSSLTEDQFIDLFRPFGRVVQAR 621
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 73/137 (53%), Gaps = 15/137 (10%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQ 261
TN+Y+ N KL E+F P+G I RV+++ G S+G+GFV Y P A +A++
Sbjct: 209 TNLYVGNLPASVGSHKLIELFLPFGQIVRSRVVDDCFTGLSQGYGFVKYSDPRCASEAIK 268
Query: 262 AWNGKEVDGKILYVGRA--QKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDD 319
NG+ V+G+ L V A + +Q+ + +M K LYV NL S++
Sbjct: 269 RMNGRLVEGRALEVRVAGFPSSEDNSQQPSKETDMAK-----------LYVCNLSLSMNT 317
Query: 320 ERLRKEFTPFGTITSAK 336
+RL F PFG +T+AK
Sbjct: 318 DRLIHLFLPFGEVTNAK 334
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 114/269 (42%), Gaps = 22/269 (8%)
Query: 79 RALDTMNFDALKGRPIRIMWSQRDPSLRKSGV--------GNVFIKNLDKSIDNKAMYDT 130
+A+ MN + G I + + PS S V ++I NL +S+ M +
Sbjct: 462 KAIAAMNGALVGGEMIIVRVAGLSPSASISAVQTTQDINKSRLYITNLPRSMTADKMVNL 521
Query: 131 FSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRK 190
F+ FG I KV + + Y V + +A K+++ ++G ++ K + V +
Sbjct: 522 FAPFGQIT--KVLMNLE-----YSLVWYADAPSAIKAVQHMDGYMVEGKRLVVKRSELCT 574
Query: 191 EREKELGEKAKL---FTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDGKSRGFGF 247
+ G K N+Y+ +++ ++F P+G + R+ + + +G
Sbjct: 575 TNASQAGGKPIKEIDMANLYVGRVPSSLTEDQFIDLFRPFGRVVQARMF----RFQRYGM 630
Query: 248 VAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVN 307
V +++P A A+ +G ++ G IL V A AE + + N
Sbjct: 631 VRFDNPSCAAAAIDHLDGYQIGGSILAVRVAGLPAESNAAKGALTSQMSSNEQGQIDMTN 690
Query: 308 LYVKNLDDSIDDERLRKEFTPFGTITSAK 336
LYV +L +++ERL F P G IT AK
Sbjct: 691 LYVSHLPSYVNNERLIDLFLPCGQITQAK 719
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 100/227 (44%), Gaps = 34/227 (14%)
Query: 67 VQLGQPYMLDTERA------LDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDK 120
VQ YM++ +R L T N G+PI+ + + N+++ +
Sbjct: 552 VQHMDGYMVEGKRLVVKRSELCTTNASQAGGKPIKEI-----------DMANLYVGRVPS 600
Query: 121 SIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKI 180
S+ D F FG ++ ++ + ++ YG V F+ A +I+ ++G + I
Sbjct: 601 SLTEDQFIDLFRPFGRVVQARMFRFQR-----YGMVRFDNPSCAAAAIDHLDGYQIGGSI 655
Query: 181 VFVG-KFIPRKEREKELGEKAKL---------FTNVYIKNFGEDFNDEKLKEMFEPYGTI 230
+ V +P + + +++ TN+Y+ + N+E+L ++F P G I
Sbjct: 656 LAVRVAGLPAESNAAKGALTSQMSSNEQGQIDMTNLYVSHLPSYVNNERLIDLFLPCGQI 715
Query: 231 TSYRVM--NNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYV 275
T +V+ G S+GFGFV + A A+ NG +DG +L V
Sbjct: 716 TQAKVVVERYTGVSKGFGFVKFADAYSAAVALTHMNGYPLDGHVLEV 762
>gi|440293231|gb|ELP86374.1| polyadenylate-binding protein, cytoplasmic and nuclear, putative
[Entamoeba invadens IP1]
Length = 538
Score = 114 bits (285), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 83/272 (30%), Positives = 136/272 (50%), Gaps = 25/272 (9%)
Query: 79 RALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSIL 138
+A++TMN + G+P+ + WS +D R N+F+KN+ K++ K M D F FG I+
Sbjct: 69 KAIETMNGALIDGKPVNMFWSLKDFKQRTETQTNLFVKNIKKTVSQKEMQDVFMTFGEII 128
Query: 139 SCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKI----VFVGKFIPRKEREK 194
S K++ +E G S G+G+V + T EAA K++E N + +KI V KF EK
Sbjct: 129 SVKLSVNENGASNGFGYVKYRTIEAALKAVE--NAAEIKAKIGEDNFIVAKF------EK 180
Query: 195 ELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTI-----TSYRVM--NNDGKSRGFGF 247
+ K TN+Y+ N + N+E+ + FE +G + ++V+ + D GF
Sbjct: 181 QTKNKK---TNLYVSNIDKSVNEEQFVKYFETFGPLRKNPDNKFQVLFASKDEYPTAMGF 237
Query: 248 VAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVN 307
V +E+ E A+KA+ A + + V K ER +E + + + +Y+ N
Sbjct: 238 VDFENEEDAQKALTAPKNNVLGQGEIKVVYYMSKKERKREYQLKNNEIMASIKGKYKEFN 297
Query: 308 LYVKNLDD---SIDDERLRKEFTPFGTITSAK 336
+YVK +D S D +R F G I S +
Sbjct: 298 MYVKTSNDSEHSTSDAEIRSAFADCGEIYSIR 329
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 119/223 (53%), Gaps = 27/223 (12%)
Query: 113 VFIKNLDKSIDNKAMYDTFSA-FGS-ILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEK 170
VF+ L K++ +Y SA F S + S V+++E ++ +V+ T EAA K+IE
Sbjct: 15 VFVSGLTKNVTESLLYKEISAKFESQVASVHVSRNEHYDT-AIAYVNMNTHEAAKKAIET 73
Query: 171 VNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTI 230
+NG L++ K V + + K+ ++ + TN+++KN + + ++++++F +G I
Sbjct: 74 MNGALIDGKPVNMFWSL------KDFKQRTETQTNLFVKNIKKTVSQKEMQDVFMTFGEI 127
Query: 231 TSYRV-MNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELK 289
S ++ +N +G S GFG+V Y + E A KAV+ N E+ KI +
Sbjct: 128 ISVKLSVNENGASNGFGYVKYRTIEAALKAVE--NAAEIKAKI---------------GE 170
Query: 290 RRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTI 332
F + K E+ + + NLYV N+D S+++E+ K F FG +
Sbjct: 171 DNFIVAKFEKQTKNKKTNLYVSNIDKSVNEEQFVKYFETFGPL 213
>gi|242025090|ref|XP_002432959.1| BTB/POZ domain-containing protein, putative [Pediculus humanus
corporis]
gi|212518468|gb|EEB20221.1| BTB/POZ domain-containing protein, putative [Pediculus humanus
corporis]
Length = 612
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 53/81 (65%), Positives = 66/81 (81%), Gaps = 1/81 (1%)
Query: 1 MYTAQTVQLSEEGIIIPKHNVATRELSAKVVEGVSRSLSSLIDGNTVKYDWDSGYTCHQL 60
+YT+ V L E G+I+PK NVAT + SA+V+EGVSR +L++G T KYDWDSGYTCHQL
Sbjct: 402 IYTSNMVTL-ENGLIVPKENVATIKKSARVIEGVSRVRDALLNGETTKYDWDSGYTCHQL 460
Query: 61 GSGAILVQLGQPYMLDTERAL 81
GSGAILVQLGQPY++D+ R L
Sbjct: 461 GSGAILVQLGQPYIIDSLRLL 481
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 39/70 (55%), Gaps = 5/70 (7%)
Query: 4 AQTVQLSEEGIIIPKHNVATRELSAKVVEGVSRSLSSLIDGNTVKYDWDSGYTCHQLGSG 63
A+ +L G+++P+ N+A +V++G +L+DGNT YD + GYT H +
Sbjct: 254 AKDSELRYRGLLLPEENMAHPSRGTQVLKG--EMTGALLDGNTDNYDLERGYTRHSINDN 311
Query: 64 ---AILVQLG 70
IL++LG
Sbjct: 312 EDHGILIKLG 321
>gi|440293224|gb|ELP86367.1| polyadenylate-binding protein, putative [Entamoeba invadens IP1]
Length = 519
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/270 (28%), Positives = 136/270 (50%), Gaps = 22/270 (8%)
Query: 78 ERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSI 137
++A++TMN + G+ + + WS +D R N+F+KN+ K++ K M D F FG I
Sbjct: 70 KKAIETMNGALIDGKTVNMFWSLKDFKQRTETQTNLFVKNIKKTVSQKEMQDVFMTFGEI 129
Query: 138 LSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKI----VFVGKFIPRKERE 193
+S K++ +E G S G+G+V + T EAA K++E N + +KI V KF E
Sbjct: 130 ISVKLSVNENGASNGFGYVKYRTIEAALKAVE--NAAEIKAKIGEDNFIVAKF------E 181
Query: 194 KELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTI-----TSYRVM--NNDGKSRGFG 246
K+ K TN+Y+ N + N+E+ + FE +G + ++V+ +D G
Sbjct: 182 KQTKNKK---TNLYVSNIDKSVNEEQFVKYFETFGPLRKNPDNKFQVLFACDDKHPTAMG 238
Query: 247 FVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGV 306
FV +E+ E A+KA+ A + + V ++ER++ ++ +K +Y+
Sbjct: 239 FVDFENEEDAQKALTAPKNNVLGQGEIKVDYYMSRSERSRVWLQKSLEIKSNIQGKYKDF 298
Query: 307 NLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
N+Y+ L + D +R F G I S +
Sbjct: 299 NMYINTLKEPTSDAEIRSAFADCGEIYSVR 328
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 120/223 (53%), Gaps = 27/223 (12%)
Query: 113 VFIKNLDKSIDNKAMYDTFSA-FGS-ILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEK 170
+F+ +L K++ +Y SA F S + S V+++E ++ +V+ T EAA K+IE
Sbjct: 17 IFVSSLSKNVTESLLYKEISAKFESQVASVHVSRNEHYDT-AIAYVNMNTHEAAKKAIET 75
Query: 171 VNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTI 230
+NG L++ K V + + K+ ++ + TN+++KN + + ++++++F +G I
Sbjct: 76 MNGALIDGKTVNMFWSL------KDFKQRTETQTNLFVKNIKKTVSQKEMQDVFMTFGEI 129
Query: 231 TSYRV-MNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELK 289
S ++ +N +G S GFG+V Y + E A KAV+ N E+ KI +
Sbjct: 130 ISVKLSVNENGASNGFGYVKYRTIEAALKAVE--NAAEIKAKI---------------GE 172
Query: 290 RRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTI 332
F + K E+ + + NLYV N+D S+++E+ K F FG +
Sbjct: 173 DNFIVAKFEKQTKNKKTNLYVSNIDKSVNEEQFVKYFETFGPL 215
>gi|222629794|gb|EEE61926.1| hypothetical protein OsJ_16667 [Oryza sativa Japonica Group]
Length = 1011
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/239 (31%), Positives = 119/239 (49%), Gaps = 15/239 (6%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSIEK 170
N+++ NL S+ + + + F FG I+ +V D G S+GYGFV + A+++I++
Sbjct: 297 NLYVGNLPASVGSHKLIELFLPFGQIVRSRVVDDCFTGLSQGYGFVKYSDPRCASEAIKR 356
Query: 171 VNGMLLNSKI--VFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
+NG L+ + V V F P E + K +Y+ N N ++L +F P+G
Sbjct: 357 MNGRLVEGRALEVRVAGF-PSSEDNSQQPSKETDMAKLYVCNLSLSMNTDRLIHLFLPFG 415
Query: 229 TITSYRVM--NNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYV---GRAQKKAE 283
+T+ +V + G S+G+GFV Y SP A +AV NG+ VDG+ + V G
Sbjct: 416 EVTNAKVAKDHTTGLSKGYGFVQYSSPHHAAEAVIHLNGRLVDGRKIEVRVSGIPSTLPN 475
Query: 284 RTQELKRRFEMLKIERLNRYQGV------NLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
E +E + + V NLYV N+ SID ++L + F PFG IT A+
Sbjct: 476 SAVESPSTTRNSAVESPSTTRTVKEIDMSNLYVCNMPSSIDTKKLVELFLPFGKITHAR 534
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 129/284 (45%), Gaps = 39/284 (13%)
Query: 80 ALDTMNFDALKGRPIRIMWS--------QRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTF 131
A+ MN ++GR + + + + PS +++ + +++ NL S++ + F
Sbjct: 353 AIKRMNGRLVEGRALEVRVAGFPSSEDNSQQPS-KETDMAKLYVCNLSLSMNTDRLIHLF 411
Query: 132 SAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSIEKVNGMLLNS-----KIVFVGK 185
FG + + KVA+D G SKGYGFV + + A +++ +NG L++ ++ +
Sbjct: 412 LPFGEVTNAKVAKDHTTGLSKGYGFVQYSSPHHAAEAVIHLNGRLVDGRKIEVRVSGIPS 471
Query: 186 FIPRKEREKELGEKAKL--------------FTNVYIKNFGEDFNDEKLKEMFEPYGTIT 231
+P E + +N+Y+ N + +KL E+F P+G IT
Sbjct: 472 TLPNSAVESPSTTRNSAVESPSTTRTVKEIDMSNLYVCNMPSSIDTKKLVELFLPFGKIT 531
Query: 232 SYRVMNNDG--KSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELK 289
RV+ + ++G+GF+ + E A KA+ A NG V G+++ V R L
Sbjct: 532 HARVVADPDTFSAKGYGFIKFTDSESATKAIAAMNGALVGGEMIIV--------RVAGLS 583
Query: 290 RRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTIT 333
+ ++ LY+ NL S+ +++ F PFG IT
Sbjct: 584 PSASISAVQTTQDINKSRLYITNLPRSMTADKMVNLFAPFGQIT 627
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 111/236 (47%), Gaps = 16/236 (6%)
Query: 104 SLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQG-NSKGYGFVHFETEE 162
++++ + N+++ N+ SID K + + F FG I +V D ++KGYGF+ F E
Sbjct: 497 TVKEIDMSNLYVCNMPSSIDTKKLVELFLPFGKITHARVVADPDTFSAKGYGFIKFTDSE 556
Query: 163 AANKSIEKVNGMLLNSK--IVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKL 220
+A K+I +NG L+ + IV V P + + +YI N +K+
Sbjct: 557 SATKAIAAMNGALVGGEMIIVRVAGLSPSASISAVQTTQDINKSRLYITNLPRSMTADKM 616
Query: 221 KEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
+F P+G IT +MN + + V Y A KAVQ +G V+GK L V R++
Sbjct: 617 VNLFAPFGQITKV-LMNLE-----YSLVWYADAPSATKAVQHMDGYMVEGKRLVVKRSEL 670
Query: 281 KAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ + I+ ++ NLYV + S+ +++ F PFG + A+
Sbjct: 671 CTTNASQAGGK----PIKEIDM---ANLYVGRVPSSLTEDQFIDLFRPFGRVVQAR 719
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 73/137 (53%), Gaps = 15/137 (10%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQ 261
TN+Y+ N KL E+F P+G I RV+++ G S+G+GFV Y P A +A++
Sbjct: 296 TNLYVGNLPASVGSHKLIELFLPFGQIVRSRVVDDCFTGLSQGYGFVKYSDPRCASEAIK 355
Query: 262 AWNGKEVDGKILYVGRA--QKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDD 319
NG+ V+G+ L V A + +Q+ + +M K LYV NL S++
Sbjct: 356 RMNGRLVEGRALEVRVAGFPSSEDNSQQPSKETDMAK-----------LYVCNLSLSMNT 404
Query: 320 ERLRKEFTPFGTITSAK 336
+RL F PFG +T+AK
Sbjct: 405 DRLIHLFLPFGEVTNAK 421
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 114/269 (42%), Gaps = 22/269 (8%)
Query: 79 RALDTMNFDALKGRPIRIMWSQRDPSLRKSGV--------GNVFIKNLDKSIDNKAMYDT 130
+A+ MN + G I + + PS S V ++I NL +S+ M +
Sbjct: 560 KAIAAMNGALVGGEMIIVRVAGLSPSASISAVQTTQDINKSRLYITNLPRSMTADKMVNL 619
Query: 131 FSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRK 190
F+ FG I KV + + Y V + +A K+++ ++G ++ K + V +
Sbjct: 620 FAPFGQIT--KVLMNLE-----YSLVWYADAPSATKAVQHMDGYMVEGKRLVVKRSELCT 672
Query: 191 EREKELGEKAKL---FTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDGKSRGFGF 247
+ G K N+Y+ +++ ++F P+G + R+ + + +G
Sbjct: 673 TNASQAGGKPIKEIDMANLYVGRVPSSLTEDQFIDLFRPFGRVVQARMF----RFQRYGM 728
Query: 248 VAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVN 307
V +++P A A+ +G ++ G IL V A AE + + N
Sbjct: 729 VRFDNPSCAAAAIDHLDGYQIGGSILAVRVAGLPAESNAAKGALTSQMSSNEQGQIDMTN 788
Query: 308 LYVKNLDDSIDDERLRKEFTPFGTITSAK 336
LYV +L +++ERL F P G IT AK
Sbjct: 789 LYVSHLPSYVNNERLIDLFLPCGQITQAK 817
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 100/227 (44%), Gaps = 34/227 (14%)
Query: 67 VQLGQPYMLDTERA------LDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDK 120
VQ YM++ +R L T N G+PI+ + + N+++ +
Sbjct: 650 VQHMDGYMVEGKRLVVKRSELCTTNASQAGGKPIKEI-----------DMANLYVGRVPS 698
Query: 121 SIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKI 180
S+ D F FG ++ ++ + ++ YG V F+ A +I+ ++G + I
Sbjct: 699 SLTEDQFIDLFRPFGRVVQARMFRFQR-----YGMVRFDNPSCAAAAIDHLDGYQIGGSI 753
Query: 181 VFVG-KFIPRKEREKELGEKAKL---------FTNVYIKNFGEDFNDEKLKEMFEPYGTI 230
+ V +P + + +++ TN+Y+ + N+E+L ++F P G I
Sbjct: 754 LAVRVAGLPAESNAAKGALTSQMSSNEQGQIDMTNLYVSHLPSYVNNERLIDLFLPCGQI 813
Query: 231 TSYRVM--NNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYV 275
T +V+ G S+GFGFV + A A+ NG +DG +L V
Sbjct: 814 TQAKVVVERYTGVSKGFGFVKFADAYSAAVALTHMNGYPLDGHVLEV 860
>gi|320168681|gb|EFW45580.1| polyadenylate-binding protein [Capsaspora owczarzaki ATCC 30864]
Length = 814
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/258 (29%), Positives = 127/258 (49%), Gaps = 40/258 (15%)
Query: 111 GNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEK 170
G + IKN+D +D+ + + F+ FG+I+S + +DE G SKGYGFV + T EAA+K++
Sbjct: 248 GKLVIKNMDVDMDDDQLEELFAPFGTIISLHIMRDETGKSKGYGFVAYSTTEAASKAMAA 307
Query: 171 VNGML-------LNSKI--------VFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDF 215
+G L+ I +F + E+ A+ N+ I+N GE
Sbjct: 308 THGQTFDRLTRPLDVTIFTSSEHDGMFKANRVAEVRHHAEVARIAQFRKNLCIRNLGESI 367
Query: 216 NDEKLKEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILY 274
++++L+ +F P+G I + V+ +D G+SR GFV + + E A KAV +GK G +
Sbjct: 368 DEKQLRALFAPFGKIRTCHVLRDDMGRSRKVGFVDFATMEEASKAVAEMHGKPSPGTQMP 427
Query: 275 V----------------GRAQKKAERTQELKRRFE-MLKIERLNRYQGVNLYVKNLDDSI 317
+ A K T E + E ++ +L +YVKN+D ++
Sbjct: 428 MTVTLSHRARDAQDPPAPNASGKDSSTDEAEPDAEGQIRPRKL-------IYVKNIDPAV 480
Query: 318 DDERLRKEFTPFGTITSA 335
+ E L++ F FG I S+
Sbjct: 481 ELEDLQRVFGQFGAIVSS 498
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 128/270 (47%), Gaps = 26/270 (9%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D A+ +N L G+ +++ PSL ++NL +++ FG
Sbjct: 126 DAHAAMTQVNGMYLNGQQVQVHRLPERPSL--------IVRNLPADASEESLAALCRPFG 177
Query: 136 SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKE 195
+ + Q E G V + E A +I ++G L S + V R ERE E
Sbjct: 178 RVGVATIVQ-EAPEDAPMGVVCLDRFEDALTAIRALHGSKLGSNQLSVTFPATRAERECE 236
Query: 196 LGEKAKLFT---NVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND-GKSRGFGFVAYE 251
+L + IKN D +D++L+E+F P+GTI S +M ++ GKS+G+GFVAY
Sbjct: 237 SAVAQRLERLQGKLVIKNMDVDMDDDQLEELFAPFGTIISLHIMRDETGKSKGYGFVAYS 296
Query: 252 SPEFAEKAVQAWNGKEVD------GKILYVGRAQK---KAERTQELKRRFEMLKIERLNR 302
+ E A KA+ A +G+ D ++ KA R E++ E+ +I + +
Sbjct: 297 TTEAASKAMAATHGQTFDRLTRPLDVTIFTSSEHDGMFKANRVAEVRHHAEVARIAQFRK 356
Query: 303 YQGVNLYVKNLDDSIDDERLRKEFTPFGTI 332
NL ++NL +SID+++LR F PFG I
Sbjct: 357 ----NLCIRNLGESIDEKQLRALFAPFGKI 382
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 75/258 (29%), Positives = 124/258 (48%), Gaps = 30/258 (11%)
Query: 77 TERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGS 136
+E+A + + R + + QR K G + +KNLD +D++ + D F FG+
Sbjct: 49 SEQAAQSRSPQPSAARALLLRVHQRS----KVGAIKLVVKNLDPRMDDQQLRDIFGEFGT 104
Query: 137 ILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKEL 196
+ CKVA +S G G V +E+ + A+ ++ +VNGM LN + V V + L
Sbjct: 105 MTLCKVA-----SSIGVGLVTYESFDDAHAAMTQVNGMYLNGQQVQVHR----------L 149
Query: 197 GEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFA 256
E+ L ++N D ++E L + P+G + ++ + G V + E A
Sbjct: 150 PERPSLI----VRNLPADASEESLAALCRPFGRVGVATIVQEAPEDAPMGVVCLDRFEDA 205
Query: 257 EKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDS 316
A++A +G ++ L V +AE R E +RL R QG L +KN+D
Sbjct: 206 LTAIRALHGSKLGSNQLSVTFPATRAE------RECESAVAQRLERLQG-KLVIKNMDVD 258
Query: 317 IDDERLRKEFTPFGTITS 334
+DD++L + F PFGTI S
Sbjct: 259 MDDDQLEELFAPFGTIIS 276
Score = 88.6 bits (218), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 120/246 (48%), Gaps = 32/246 (13%)
Query: 91 GRPIRIMWSQRDPSLRKSGV--GNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQG 148
G+P+R+ S DP R S + ++ IKNL++SI+ A+ D FS FG ILS + + +
Sbjct: 538 GQPLRV--SLPDPRDRFSPIRYASLIIKNLEQSINLSALRDLFSPFGCILSSRTIETQPR 595
Query: 149 NSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYI 208
+ V F +EEA +I +NG ++N V ++ RK+R +VY+
Sbjct: 596 AA----LVDFLSEEACQNAIANINGAIVNGLPVTASPYV-RKDRR-----------SVYV 639
Query: 209 KNFGEDFNDEKLKEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEV 268
N ++N KL +F G I + ++ D + GFV ++ P E A + ++G +
Sbjct: 640 ANLPANYNYVKLMALFADCGKIVTT-IVPRDFST--VGFVCFDQPASVELA-ERFHGHVL 695
Query: 269 DGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTP 328
+G+ LYV R + + E+ LY+ N+D ++++R+ P
Sbjct: 696 EGEELYVSRFPLQTDPAPPPHATSEVAPYH--------ILYLTNVDFEASEDKVRELCAP 747
Query: 329 FGTITS 334
+GT+T+
Sbjct: 748 YGTLTA 753
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 72/248 (29%), Positives = 115/248 (46%), Gaps = 39/248 (15%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
N+ I+NL +SID K + F+ FG I +C V +D+ G S+ GFV F T E A+K++ ++
Sbjct: 357 NLCIRNLGESIDEKQLRALFAPFGKIRTCHVLRDDMGRSRKVGFVDFATMEEASKAVAEM 416
Query: 172 NG-------MLLNSKIVF-------------VGKFIPRKEREKELGEKAKLFTNVYIKNF 211
+G M + + GK E E + + + +Y+KN
Sbjct: 417 HGKPSPGTQMPMTVTLSHRARDAQDPPAPNASGKDSSTDEAEPDAEGQIRPRKLIYVKNI 476
Query: 212 GEDFNDEKLKEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVD- 269
E L+ +F +G I S +M +D G S+G G V Y + A AV A +GK +
Sbjct: 477 DPAVELEDLQRVFGQFGAIVSSNIMRDDAGISKGIGHVDYLHADAARAAVAAMDGKRLTA 536
Query: 270 -GKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTP 328
G+ L V + +R + + +L +KNL+ SI+ LR F+P
Sbjct: 537 TGQPLRVSLPDPR----------------DRFSPIRYASLIIKNLEQSINLSALRDLFSP 580
Query: 329 FGTITSAK 336
FG I S++
Sbjct: 581 FGCILSSR 588
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 82/162 (50%), Gaps = 16/162 (9%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
+V++ NL + + + F+ G I++ V +D GFV F+ + A+ + E+
Sbjct: 636 SVYVANLPANYNYVKLMALFADCGKIVTTIVPRD----FSTVGFVCFD-QPASVELAERF 690
Query: 172 NGMLLNSKIVFVGKF------IPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFE 225
+G +L + ++V +F P E+ + +Y+ N + +++K++E+
Sbjct: 691 HGHVLEGEELYVSRFPLQTDPAPPPHATSEVAP----YHILYLTNVDFEASEDKVRELCA 746
Query: 226 PYGTITSYRVMNN-DGKSRGFGFVAYESPEFAEKAVQAWNGK 266
PYGT+T+ V DG SRGF FV + + E A KA A +G+
Sbjct: 747 PYGTLTAVHVRRRADGTSRGFAFVHFTNVEDASKAKDALSGQ 788
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 81/159 (50%), Gaps = 9/159 (5%)
Query: 113 VFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVN 172
+++KN+D +++ + + F FG+I+S + +D+ G SKG G V + +AA ++ ++
Sbjct: 471 IYVKNIDPAVELEDLQRVFGQFGAIVSSNIMRDDAGISKGIGHVDYLHADAARAAVAAMD 530
Query: 173 GMLLNSKIVFVGKFIP-RKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTIT 231
G L + + +P ++R + + ++ IKN + N L+++F P+G I
Sbjct: 531 GKRLTATGQPLRVSLPDPRDRFSPI-----RYASLIIKNLEQSINLSALRDLFSPFGCIL 585
Query: 232 SYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDG 270
S R + ++ V + S E + A+ NG V+G
Sbjct: 586 SSRTIETQPRA---ALVDFLSEEACQNAIANINGAIVNG 621
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%)
Query: 286 QELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
Q R +L++ + ++ + L VKNLD +DD++LR F FGT+T K
Sbjct: 59 QPSAARALLLRVHQRSKVGAIKLVVKNLDPRMDDQQLRDIFGEFGTMTLCK 109
Score = 37.7 bits (86), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 19/82 (23%), Positives = 39/82 (47%), Gaps = 6/82 (7%)
Query: 100 QRDPSLRKSGVGNV------FIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGY 153
Q DP+ V ++ N+D + + + +G++ + V + G S+G+
Sbjct: 708 QTDPAPPPHATSEVAPYHILYLTNVDFEASEDKVRELCAPYGTLTAVHVRRRADGTSRGF 767
Query: 154 GFVHFETEEAANKSIEKVNGML 175
FVHF E A+K+ + ++G +
Sbjct: 768 AFVHFTNVEDASKAKDALSGQI 789
>gi|403339745|gb|EJY69134.1| Polyadenylate-binding protein, cytoplasmic and nuclear [Oxytricha
trifallax]
Length = 593
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 87/240 (36%), Positives = 125/240 (52%), Gaps = 32/240 (13%)
Query: 113 VFIKNLDKSIDNKAMYDTFS-AFG--SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIE 169
+ +KNLDKSI ++ + + F+ FG ++LS KV+ + +S+GYGFV F + A +++
Sbjct: 106 LLVKNLDKSITSQQLDEIFAKVFGDDAVLSAKVSINSDYSSRGYGFVQFACPQLAEQALA 165
Query: 170 KVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGT 229
K S+ F RE E K F N+YIKNF ++N EK++E+F YGT
Sbjct: 166 KA------SEFNFEISTHQPMNRE----ELRKTFNNIYIKNFPSNWNKEKIEEIFGQYGT 215
Query: 230 ITSYRVMNNDGKSRG------FGFVAYESPE-------FAEKAVQAWNGKEVDGKILYVG 276
I S VM GK +G F FV YE P+ A+ A+ N KE DG L V
Sbjct: 216 IKSTVVMM--GKVQGTDQEAPFAFVCYEDPDNKEYGPKCAQNAITQENDKEYDGFKLQVK 273
Query: 277 RAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
A K+ R QE +R LK N + NLYVKN ++ ++E+L+ F +G I K
Sbjct: 274 EALPKSLREQEKQREQNRLK----NSKKRCNLYVKNFPENTNEEQLKAYFEKYGEIERIK 329
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 125/258 (48%), Gaps = 33/258 (12%)
Query: 46 TVKYDWDSGYTCHQLGSGAILVQLGQPYMLDTERAL---DTMNFDALKGRPIRIMWSQRD 102
+ K +S Y+ G VQ P + E+AL NF+ +P+ R+
Sbjct: 135 SAKVSINSDYSSRGYG----FVQFACPQL--AEQALAKASEFNFEISTHQPMN-----RE 183
Query: 103 PSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSK--GYGFVHFE 159
LRK+ N++IKN + + + + + F +G+I S V + QG + + FV +E
Sbjct: 184 -ELRKT-FNNIYIKNFPSNWNKEKIEEIFGQYGTIKSTVVMMGKVQGTDQEAPFAFVCYE 241
Query: 160 TEE-------AANKSIEKVNGMLLNSKIVFVGKFIPR------KEREKELGEKAKLFTNV 206
+ A +I + N + + V + +P+ K+RE+ + +K N+
Sbjct: 242 DPDNKEYGPKCAQNAITQENDKEYDGFKLQVKEALPKSLREQEKQREQNRLKNSKKRCNL 301
Query: 207 YIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGK 266
Y+KNF E+ N+E+LK FE YG I ++++ +G + + FV Y++PE A A Q +
Sbjct: 302 YVKNFPENTNEEQLKAYFEKYGEIERIKLIHKEGAA-VYAFVCYKNPESATYAKQQSQTQ 360
Query: 267 EVDGKILYVGRAQKKAER 284
++GK L++ ++K R
Sbjct: 361 TLNGKQLFLNFYEQKEVR 378
>gi|307188499|gb|EFN73236.1| BTB/POZ domain-containing protein 9 [Camponotus floridanus]
Length = 602
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 52/80 (65%), Positives = 64/80 (80%), Gaps = 1/80 (1%)
Query: 2 YTAQTVQLSEEGIIIPKHNVATRELSAKVVEGVSRSLSSLIDGNTVKYDWDSGYTCHQLG 61
YT T QLS+ G+I+P NVA E SA V+EGVSRS ++L++G+ YDWDSGYTCHQLG
Sbjct: 405 YTNHTEQLSK-GVIVPTQNVALAEKSACVIEGVSRSRNNLLNGDVTNYDWDSGYTCHQLG 463
Query: 62 SGAILVQLGQPYMLDTERAL 81
SG+ILVQLGQPYM+D+ R L
Sbjct: 464 SGSILVQLGQPYMIDSMRLL 483
Score = 38.1 bits (87), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 43/79 (54%), Gaps = 5/79 (6%)
Query: 6 TVQLSEEGIIIPKHNVATRELSAKVVEGVSRSLSSLIDGNTVKYDWDSGYTCHQLGS--- 62
T+ L G ++ NVA A+V++G RS L++G+T YD + GYT H +
Sbjct: 258 TLGLPYRGRLLIDENVAHPMHDAQVLQGEMRSY--LLNGDTNNYDMERGYTRHTITDTHE 315
Query: 63 GAILVQLGQPYMLDTERAL 81
IL++LG Y+++ + L
Sbjct: 316 HGILIKLGTQYIINHIKML 334
>gi|50545625|ref|XP_500351.1| YALI0B00616p [Yarrowia lipolytica]
gi|49646217|emb|CAG82565.1| YALI0B00616p [Yarrowia lipolytica CLIB122]
Length = 589
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 56/135 (41%), Positives = 85/135 (62%), Gaps = 1/135 (0%)
Query: 203 FTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRV-MNNDGKSRGFGFVAYESPEFAEKAVQ 261
FTN++++ + +E L+ FE +G +TS + ++ +++GFGFV +E A AV
Sbjct: 189 FTNLFVRGLSRETTEEALRAEFERFGAVTSLLLPLDESHRAKGFGFVNFEEHRDAVTAVA 248
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDER 321
A +G E+ G + V RAQ K ER ELKR +E +IERL +G NLY+ NL+ +I++ER
Sbjct: 249 ALDGAELCGARISVSRAQSKVERQAELKRAYEANRIERLRNARGTNLYITNLNPAINNER 308
Query: 322 LRKEFTPFGTITSAK 336
LR F+ FG ITS +
Sbjct: 309 LRAYFSKFGEITSVR 323
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 104/205 (50%), Gaps = 16/205 (7%)
Query: 101 RDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFET 160
RDP K+ N+F++ L + +A+ F FG++ S + DE +KG+GFV+FE
Sbjct: 183 RDP---KTHFTNLFVRGLSRETTEEALRAEFERFGAVTSLLLPLDESHRAKGFGFVNFEE 239
Query: 161 EEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGE----------KAKLFTNVYIKN 210
A ++ ++G L + V + + ER+ EL + TN+YI N
Sbjct: 240 HRDAVTAVAALDGAELCGARISVSRAQSKVERQAELKRAYEANRIERLRNARGTNLYITN 299
Query: 211 FGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVD 269
N+E+L+ F +G ITS R+M + G S+GFGFV + P+ A A+ + + ++
Sbjct: 300 LNPAINNERLRAYFSKFGEITSVRIMLDAVGNSKGFGFVCFRDPDHASNAIAEMHNRPIE 359
Query: 270 GKILYVGRAQKKAERTQE--LKRRF 292
G +L V A KK ++ L +RF
Sbjct: 360 GNVLQVAIAHKKDPQSAPYSLGKRF 384
>gi|115461392|ref|NP_001054296.1| Os04g0682400 [Oryza sativa Japonica Group]
gi|113565867|dbj|BAF16210.1| Os04g0682400 [Oryza sativa Japonica Group]
Length = 1008
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 74/240 (30%), Positives = 118/240 (49%), Gaps = 17/240 (7%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSIEK 170
N+++ NL S+ + + + F FG I+ +V D G S+GYGFV + A+++I++
Sbjct: 294 NLYVGNLPASVGSHKLIELFLPFGQIVRSRVVDDCFTGLSQGYGFVKYSDPRCASEAIKR 353
Query: 171 VNGMLLNS---KIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPY 227
+NG L+ K+ G P E + K +Y+ N N ++L +F P+
Sbjct: 354 MNGRLVEGTALKVRVTG--FPSSEDNSQQPSKETDMAKLYVCNLSLSMNTDRLIHLFLPF 411
Query: 228 GTITSYRVM--NNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYV---GRAQKKA 282
G +T+ +V + G S+G+GFV Y SP A +AV NG+ VDG+ + V G
Sbjct: 412 GEVTNAKVAKDHTTGLSKGYGFVQYSSPHHAAEAVIHLNGRLVDGRKIEVRVSGIPSTLP 471
Query: 283 ERTQELKRRFEMLKIERLNRYQGV------NLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
E +E + + V NLYV N+ SID ++L + F PFG IT A+
Sbjct: 472 NSAVESPSTTRNSAVESPSTTRTVKEIDMSNLYVCNMPSSIDTKKLVELFLPFGKITHAR 531
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 118/255 (46%), Gaps = 31/255 (12%)
Query: 101 RDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFE 159
+ PS +++ + +++ NL S++ + F FG + + KVA+D G SKGYGFV +
Sbjct: 379 QQPS-KETDMAKLYVCNLSLSMNTDRLIHLFLPFGEVTNAKVAKDHTTGLSKGYGFVQYS 437
Query: 160 TEEAANKSIEKVNGMLLNS-----KIVFVGKFIPRKEREKELGEKAKL------------ 202
+ A +++ +NG L++ ++ + +P E +
Sbjct: 438 SPHHAAEAVIHLNGRLVDGRKIEVRVSGIPSTLPNSAVESPSTTRNSAVESPSTTRTVKE 497
Query: 203 --FTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDG--KSRGFGFVAYESPEFAEK 258
+N+Y+ N + +KL E+F P+G IT RV+ + ++G+GF+ + E A K
Sbjct: 498 IDMSNLYVCNMPSSIDTKKLVELFLPFGKITHARVVADPDTFSAKGYGFIKFTDSESATK 557
Query: 259 AVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSID 318
A+ A NG V G+++ V R L + ++ LY+ NL S+
Sbjct: 558 AIAAMNGALVGGEMIIV--------RVAGLSPSASISAVQTTQDINKSRLYITNLPRSMT 609
Query: 319 DERLRKEFTPFGTIT 333
+++ F PFG IT
Sbjct: 610 ADKMVNLFAPFGQIT 624
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 111/236 (47%), Gaps = 16/236 (6%)
Query: 104 SLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQG-NSKGYGFVHFETEE 162
++++ + N+++ N+ SID K + + F FG I +V D ++KGYGF+ F E
Sbjct: 494 TVKEIDMSNLYVCNMPSSIDTKKLVELFLPFGKITHARVVADPDTFSAKGYGFIKFTDSE 553
Query: 163 AANKSIEKVNGMLLNSK--IVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKL 220
+A K+I +NG L+ + IV V P + + +YI N +K+
Sbjct: 554 SATKAIAAMNGALVGGEMIIVRVAGLSPSASISAVQTTQDINKSRLYITNLPRSMTADKM 613
Query: 221 KEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
+F P+G IT +MN + + V Y A KAVQ +G V+GK L V R++
Sbjct: 614 VNLFAPFGQITKV-LMNLE-----YSLVWYADAPSATKAVQHMDGYMVEGKRLVVKRSEL 667
Query: 281 KAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ + I+ ++ NLYV + S+ +++ F PFG + A+
Sbjct: 668 CTTNASQAGGK----PIKEIDM---ANLYVGRVPSSLTEDQFIDLFRPFGRVVQAR 716
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 71/137 (51%), Gaps = 15/137 (10%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQ 261
TN+Y+ N KL E+F P+G I RV+++ G S+G+GFV Y P A +A++
Sbjct: 293 TNLYVGNLPASVGSHKLIELFLPFGQIVRSRVVDDCFTGLSQGYGFVKYSDPRCASEAIK 352
Query: 262 AWNGKEVDGKILYVGRA--QKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDD 319
NG+ V+G L V + +Q+ + +M K LYV NL S++
Sbjct: 353 RMNGRLVEGTALKVRVTGFPSSEDNSQQPSKETDMAK-----------LYVCNLSLSMNT 401
Query: 320 ERLRKEFTPFGTITSAK 336
+RL F PFG +T+AK
Sbjct: 402 DRLIHLFLPFGEVTNAK 418
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 114/269 (42%), Gaps = 22/269 (8%)
Query: 79 RALDTMNFDALKGRPIRIMWSQRDPSLRKSGV--------GNVFIKNLDKSIDNKAMYDT 130
+A+ MN + G I + + PS S V ++I NL +S+ M +
Sbjct: 557 KAIAAMNGALVGGEMIIVRVAGLSPSASISAVQTTQDINKSRLYITNLPRSMTADKMVNL 616
Query: 131 FSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRK 190
F+ FG I KV + + Y V + +A K+++ ++G ++ K + V +
Sbjct: 617 FAPFGQIT--KVLMNLE-----YSLVWYADAPSATKAVQHMDGYMVEGKRLVVKRSELCT 669
Query: 191 EREKELGEKAKL---FTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDGKSRGFGF 247
+ G K N+Y+ +++ ++F P+G + R+ + + +G
Sbjct: 670 TNASQAGGKPIKEIDMANLYVGRVPSSLTEDQFIDLFRPFGRVVQARMF----RFQRYGM 725
Query: 248 VAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVN 307
V +++P A A+ +G ++ G IL V A AE + + N
Sbjct: 726 VRFDNPSCAAAAIDHLDGYQIGGSILAVRVAGLPAESNAAKGALTSQMSSNEQGQIDMTN 785
Query: 308 LYVKNLDDSIDDERLRKEFTPFGTITSAK 336
LYV +L +++ERL F P G IT AK
Sbjct: 786 LYVSHLPSYVNNERLIDLFLPCGQITQAK 814
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 100/227 (44%), Gaps = 34/227 (14%)
Query: 67 VQLGQPYMLDTERA------LDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDK 120
VQ YM++ +R L T N G+PI+ + + N+++ +
Sbjct: 647 VQHMDGYMVEGKRLVVKRSELCTTNASQAGGKPIKEI-----------DMANLYVGRVPS 695
Query: 121 SIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKI 180
S+ D F FG ++ ++ + ++ YG V F+ A +I+ ++G + I
Sbjct: 696 SLTEDQFIDLFRPFGRVVQARMFRFQR-----YGMVRFDNPSCAAAAIDHLDGYQIGGSI 750
Query: 181 VFVG-KFIPRKEREKELGEKAKL---------FTNVYIKNFGEDFNDEKLKEMFEPYGTI 230
+ V +P + + +++ TN+Y+ + N+E+L ++F P G I
Sbjct: 751 LAVRVAGLPAESNAAKGALTSQMSSNEQGQIDMTNLYVSHLPSYVNNERLIDLFLPCGQI 810
Query: 231 TSYRVM--NNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYV 275
T +V+ G S+GFGFV + A A+ NG +DG +L V
Sbjct: 811 TQAKVVVERYTGVSKGFGFVKFADAYSAAVALTHMNGYPLDGHVLEV 857
>gi|297830144|ref|XP_002882954.1| hypothetical protein ARALYDRAFT_897861 [Arabidopsis lyrata subsp.
lyrata]
gi|297328794|gb|EFH59213.1| hypothetical protein ARALYDRAFT_897861 [Arabidopsis lyrata subsp.
lyrata]
Length = 406
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 69/192 (35%), Positives = 113/192 (58%), Gaps = 13/192 (6%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
NV+++NL +++ ++ FS +G + S V +D G S+G GFV+F E A K++E +
Sbjct: 67 NVYVENLIENVTEDILHRLFSQYGIVSSVVVMRDGMGRSRGLGFVNFCHLENAKKAVEFL 126
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEK------AKL---FTNVYIKNFGEDFNDEKLKE 222
G L SK +FVGK + + ER + L + AK ++N+Y+KN E ND +L+E
Sbjct: 127 CGRQLGSKTLFVGKALRKDERMEMLKQHFRDNSIAKPNMGWSNMYVKNLSESMNDTRLRE 186
Query: 223 MFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKK 281
+F YG I S +VM ++ G+S+GFGFV + + E +++A + N VDGK L V ++K
Sbjct: 187 IFGRYGQIVSAKVMRHENGRSKGFGFVCFSNREESKQAKRYLN---VDGKPLVVRVTERK 243
Query: 282 AERTQELKRRFE 293
+ + L + F
Sbjct: 244 EDTLKRLHQYFH 255
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 66/167 (39%), Positives = 102/167 (61%), Gaps = 4/167 (2%)
Query: 171 VNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTI 230
++G +++ K +FV KFI + ER + FTNVY++N E+ ++ L +F YG +
Sbjct: 35 LHGSMVDGKKLFVAKFINKDERAAMSWNQE--FTNVYVENLIENVTEDILHRLFSQYGIV 92
Query: 231 TSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELK 289
+S VM + G+SRG GFV + E A+KAV+ G+++ K L+VG+A +K ER + LK
Sbjct: 93 SSVVVMRDGMGRSRGLGFVNFCHLENAKKAVEFLCGRQLGSKTLFVGKALRKDERMEMLK 152
Query: 290 RRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ F I + N N+YVKNL +S++D RLR+ F +G I SAK
Sbjct: 153 QHFRDNSIAKPN-MGWSNMYVKNLSESMNDTRLREIFGRYGQIVSAK 198
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 46/74 (62%), Gaps = 2/74 (2%)
Query: 101 RDPSLRKSGVG--NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHF 158
RD S+ K +G N+++KNL +S+++ + + F +G I+S KV + E G SKG+GFV F
Sbjct: 156 RDNSIAKPNMGWSNMYVKNLSESMNDTRLREIFGRYGQIVSAKVMRHENGRSKGFGFVCF 215
Query: 159 ETEEAANKSIEKVN 172
E + ++ +N
Sbjct: 216 SNREESKQAKRYLN 229
>gi|118486179|gb|ABK94932.1| unknown [Populus trichocarpa]
Length = 408
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 71/164 (43%), Positives = 98/164 (59%), Gaps = 11/164 (6%)
Query: 144 QDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELG------ 197
+D G S+ +GFV+FE + A K+ E +NG + K FVGK + ERE EL
Sbjct: 2 RDGDGKSRCFGFVNFENADDAAKAAEALNGKKFDDKEWFVGKAQKKYEREVELKQRFEQS 61
Query: 198 --EKAKLF--TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN-DGKSRGFGFVAYES 252
E A F N+YIKN + DEK+KE+F P+GTITS +VM + +G SRG GFVA+ +
Sbjct: 62 MKEAADKFQGANLYIKNLDDSIGDEKIKELFSPFGTITSCKVMRDPNGISRGSGFVAFST 121
Query: 253 PEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLK 296
PE A +A+ NGK V K LYV AQ+K +R L+ +F ++
Sbjct: 122 PEEASRALLEMNGKMVASKPLYVALAQRKEDRRARLQAQFSQMR 165
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/100 (57%), Positives = 75/100 (75%)
Query: 237 NNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLK 296
+ DGKSR FGFV +E+ + A KA +A NGK+ D K +VG+AQKK ER ELK+RFE
Sbjct: 3 DGDGKSRCFGFVNFENADDAAKAAEALNGKKFDDKEWFVGKAQKKYEREVELKQRFEQSM 62
Query: 297 IERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
E +++QG NLY+KNLDDSI DE++++ F+PFGTITS K
Sbjct: 63 KEAADKFQGANLYIKNLDDSIGDEKIKELFSPFGTITSCK 102
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 52/72 (72%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
N++IKNLD SI ++ + + FS FG+I SCKV +D G S+G GFV F T E A++++ ++
Sbjct: 73 NLYIKNLDDSIGDEKIKELFSPFGTITSCKVMRDPNGISRGSGFVAFSTPEEASRALLEM 132
Query: 172 NGMLLNSKIVFV 183
NG ++ SK ++V
Sbjct: 133 NGKMVASKPLYV 144
>gi|38345560|emb|CAE03434.2| OSJNBa0032F06.17 [Oryza sativa Japonica Group]
Length = 924
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 74/240 (30%), Positives = 118/240 (49%), Gaps = 17/240 (7%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFETEEAANKSIEK 170
N+++ NL S+ + + + F FG I+ +V D G S+GYGFV + A+++I++
Sbjct: 210 NLYVGNLPASVGSHKLIELFLPFGQIVRSRVVDDCFTGLSQGYGFVKYSDPRCASEAIKR 269
Query: 171 VNGMLLNS---KIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPY 227
+NG L+ K+ G P E + K +Y+ N N ++L +F P+
Sbjct: 270 MNGRLVEGTALKVRVTG--FPSSEDNSQQPSKETDMAKLYVCNLSLSMNTDRLIHLFLPF 327
Query: 228 GTITSYRVM--NNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYV---GRAQKKA 282
G +T+ +V + G S+G+GFV Y SP A +AV NG+ VDG+ + V G
Sbjct: 328 GEVTNAKVAKDHTTGLSKGYGFVQYSSPHHAAEAVIHLNGRLVDGRKIEVRVSGIPSTLP 387
Query: 283 ERTQELKRRFEMLKIERLNRYQGV------NLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
E +E + + V NLYV N+ SID ++L + F PFG IT A+
Sbjct: 388 NSAVESPSTTRNSAVESPSTTRTVKEIDMSNLYVCNMPSSIDTKKLVELFLPFGKITHAR 447
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 118/255 (46%), Gaps = 31/255 (12%)
Query: 101 RDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFVHFE 159
+ PS +++ + +++ NL S++ + F FG + + KVA+D G SKGYGFV +
Sbjct: 295 QQPS-KETDMAKLYVCNLSLSMNTDRLIHLFLPFGEVTNAKVAKDHTTGLSKGYGFVQYS 353
Query: 160 TEEAANKSIEKVNGMLLNS-----KIVFVGKFIPRKEREKELGEKAKL------------ 202
+ A +++ +NG L++ ++ + +P E +
Sbjct: 354 SPHHAAEAVIHLNGRLVDGRKIEVRVSGIPSTLPNSAVESPSTTRNSAVESPSTTRTVKE 413
Query: 203 --FTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDG--KSRGFGFVAYESPEFAEK 258
+N+Y+ N + +KL E+F P+G IT RV+ + ++G+GF+ + E A K
Sbjct: 414 IDMSNLYVCNMPSSIDTKKLVELFLPFGKITHARVVADPDTFSAKGYGFIKFTDSESATK 473
Query: 259 AVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSID 318
A+ A NG V G+++ V R L + ++ LY+ NL S+
Sbjct: 474 AIAAMNGALVGGEMIIV--------RVAGLSPSASISAVQTTQDINKSRLYITNLPRSMT 525
Query: 319 DERLRKEFTPFGTIT 333
+++ F PFG IT
Sbjct: 526 ADKMVNLFAPFGQIT 540
Score = 89.0 bits (219), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 111/236 (47%), Gaps = 16/236 (6%)
Query: 104 SLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQG-NSKGYGFVHFETEE 162
++++ + N+++ N+ SID K + + F FG I +V D ++KGYGF+ F E
Sbjct: 410 TVKEIDMSNLYVCNMPSSIDTKKLVELFLPFGKITHARVVADPDTFSAKGYGFIKFTDSE 469
Query: 163 AANKSIEKVNGMLLNSK--IVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKL 220
+A K+I +NG L+ + IV V P + + +YI N +K+
Sbjct: 470 SATKAIAAMNGALVGGEMIIVRVAGLSPSASISAVQTTQDINKSRLYITNLPRSMTADKM 529
Query: 221 KEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
+F P+G IT +MN + + V Y A KAVQ +G V+GK L V R++
Sbjct: 530 VNLFAPFGQITKV-LMNLE-----YSLVWYADAPSATKAVQHMDGYMVEGKRLVVKRSEL 583
Query: 281 KAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ + I+ ++ NLYV + S+ +++ F PFG + A+
Sbjct: 584 CTTNASQAGGK----PIKEIDM---ANLYVGRVPSSLTEDQFIDLFRPFGRVVQAR 632
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 71/137 (51%), Gaps = 15/137 (10%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQ 261
TN+Y+ N KL E+F P+G I RV+++ G S+G+GFV Y P A +A++
Sbjct: 209 TNLYVGNLPASVGSHKLIELFLPFGQIVRSRVVDDCFTGLSQGYGFVKYSDPRCASEAIK 268
Query: 262 AWNGKEVDGKILYVGRA--QKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDD 319
NG+ V+G L V + +Q+ + +M K LYV NL S++
Sbjct: 269 RMNGRLVEGTALKVRVTGFPSSEDNSQQPSKETDMAK-----------LYVCNLSLSMNT 317
Query: 320 ERLRKEFTPFGTITSAK 336
+RL F PFG +T+AK
Sbjct: 318 DRLIHLFLPFGEVTNAK 334
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 114/269 (42%), Gaps = 22/269 (8%)
Query: 79 RALDTMNFDALKGRPIRIMWSQRDPSLRKSGV--------GNVFIKNLDKSIDNKAMYDT 130
+A+ MN + G I + + PS S V ++I NL +S+ M +
Sbjct: 473 KAIAAMNGALVGGEMIIVRVAGLSPSASISAVQTTQDINKSRLYITNLPRSMTADKMVNL 532
Query: 131 FSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRK 190
F+ FG I KV + + Y V + +A K+++ ++G ++ K + V +
Sbjct: 533 FAPFGQIT--KVLMNLE-----YSLVWYADAPSATKAVQHMDGYMVEGKRLVVKRSELCT 585
Query: 191 EREKELGEKAKL---FTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDGKSRGFGF 247
+ G K N+Y+ +++ ++F P+G + R+ + + +G
Sbjct: 586 TNASQAGGKPIKEIDMANLYVGRVPSSLTEDQFIDLFRPFGRVVQARMF----RFQRYGM 641
Query: 248 VAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVN 307
V +++P A A+ +G ++ G IL V A AE + + N
Sbjct: 642 VRFDNPSCAAAAIDHLDGYQIGGSILAVRVAGLPAESNAAKGALTSQMSSNEQGQIDMTN 701
Query: 308 LYVKNLDDSIDDERLRKEFTPFGTITSAK 336
LYV +L +++ERL F P G IT AK
Sbjct: 702 LYVSHLPSYVNNERLIDLFLPCGQITQAK 730
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 100/227 (44%), Gaps = 34/227 (14%)
Query: 67 VQLGQPYMLDTERA------LDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDK 120
VQ YM++ +R L T N G+PI+ + + N+++ +
Sbjct: 563 VQHMDGYMVEGKRLVVKRSELCTTNASQAGGKPIKEI-----------DMANLYVGRVPS 611
Query: 121 SIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKI 180
S+ D F FG ++ ++ + ++ YG V F+ A +I+ ++G + I
Sbjct: 612 SLTEDQFIDLFRPFGRVVQARMFRFQR-----YGMVRFDNPSCAAAAIDHLDGYQIGGSI 666
Query: 181 VFVG-KFIPRKEREKELGEKAKL---------FTNVYIKNFGEDFNDEKLKEMFEPYGTI 230
+ V +P + + +++ TN+Y+ + N+E+L ++F P G I
Sbjct: 667 LAVRVAGLPAESNAAKGALTSQMSSNEQGQIDMTNLYVSHLPSYVNNERLIDLFLPCGQI 726
Query: 231 TSYRVM--NNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYV 275
T +V+ G S+GFGFV + A A+ NG +DG +L V
Sbjct: 727 TQAKVVVERYTGVSKGFGFVKFADAYSAAVALTHMNGYPLDGHVLEV 773
>gi|328709448|ref|XP_001949084.2| PREDICTED: LOW QUALITY PROTEIN: BTB/POZ domain-containing protein
9-like [Acyrthosiphon pisum]
Length = 641
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 49/83 (59%), Positives = 64/83 (77%), Gaps = 2/83 (2%)
Query: 1 MYTAQTVQLS--EEGIIIPKHNVATRELSAKVVEGVSRSLSSLIDGNTVKYDWDSGYTCH 58
MY ++ + L E+G+++PK+NVAT ++A V++GVSR +SL+DGN YDWD GYTCH
Sbjct: 433 MYNSEEMHLVDIEKGLVVPKYNVATMAMNAIVIDGVSRCRNSLLDGNCKDYDWDCGYTCH 492
Query: 59 QLGSGAILVQLGQPYMLDTERAL 81
QLGSG ILVQLGQPYML + R L
Sbjct: 493 QLGSGCILVQLGQPYMLSSMRML 515
>gi|440302784|gb|ELP95091.1| polyadenylate-binding protein, cytoplasmic and nuclear, putative
[Entamoeba invadens IP1]
Length = 546
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 79/265 (29%), Positives = 134/265 (50%), Gaps = 18/265 (6%)
Query: 79 RALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSIL 138
R + T+N + G+PI + W+ +D R N+F+KN+ KS++ K + D FSA G L
Sbjct: 78 RVISTLNGVMVDGKPINMFWALKDFKQRTDTQTNLFVKNIKKSVNQKELQDVFSAIGETL 137
Query: 139 SCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGM--LLNSKIVFVGKFIPRKEREKEL 196
S K++ +E+G S G+G+V + T EA +++K + + + + V KF + + K
Sbjct: 138 SVKLSLNEKGESNGFGYVKYRTLEATQAALDKSDELKAKIGEETFVVQKFEKQNKSRK-- 195
Query: 197 GEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTI--TSYR-----VMNNDGKSRGFGFVA 249
TN+Y+ N + +E+ + FE +G I TS + ++ + K GFV
Sbjct: 196 -------TNLYVYNIDKKVTEEQFIKYFETFGPIRKTSDKKPQVLFVSEETKDTAKGFVD 248
Query: 250 YESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLY 309
+E+ E A KAV A + + V + K ER +E K + +K +Y+ NLY
Sbjct: 249 FENEEDAAKAVSAPKNSVLGNGEIVVAYYKNKEERRREWKAKTAEVKANIKGKYKDFNLY 308
Query: 310 VKNLDDSIDDERLRKEFTPFGTITS 334
V L +SI ++ +R+ G I S
Sbjct: 309 VDTLKESITEKEIREGLGEEGEIYS 333
>gi|297733643|emb|CBI14890.3| unnamed protein product [Vitis vinifera]
Length = 357
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 49/73 (67%), Positives = 59/73 (80%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D RALD +NF L G+P+RIM+S RDPS+RKSG N+FIKNLDK ID+KA++DTFSAFG
Sbjct: 278 DAARALDVLNFTPLNGKPLRIMYSHRDPSIRKSGTENIFIKNLDKGIDHKALHDTFSAFG 337
Query: 136 SILSCKVAQDEQG 148
+ILSCK A D G
Sbjct: 338 NILSCKEATDASG 350
>gi|242077714|ref|XP_002448793.1| hypothetical protein SORBIDRAFT_06g033290 [Sorghum bicolor]
gi|241939976|gb|EES13121.1| hypothetical protein SORBIDRAFT_06g033290 [Sorghum bicolor]
Length = 1076
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 77/254 (30%), Positives = 127/254 (50%), Gaps = 32/254 (12%)
Query: 99 SQRDPSLRKSGVG-NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSKGYGFV 156
S D K G G N+F+ NL S+ + + + F FG I+ +V D G+SKGYGFV
Sbjct: 216 SAHDEGKLKEGNGTNLFVGNLPPSLASHKLIELFLPFGRIVKSRVVDDCFTGSSKGYGFV 275
Query: 157 HFETEEAANKSIEKVNGMLLNSKIVFVG-KFIPRKEREKELGEKAKLFTNVYIKNFGEDF 215
+ A ++I+ +NG ++ +++ V P KE+ + +Y+ N
Sbjct: 276 QYSDPRYAAEAIKHMNGRMVEGRMLEVRLAGAPSSGSTKEMD-----MSKLYVCNLPLLL 330
Query: 216 NDEKLKEMFEPYGTITSYRVMNND--GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKIL 273
+++KL ++F PYG +TS +VM + G S+G+GFV Y P+ A A+ NG ++GK +
Sbjct: 331 HEDKLHDLFVPYGQVTSVKVMRDHATGLSKGYGFVRYSDPQHAAHAIFQLNGHLIEGKKM 390
Query: 274 YVGRA-----------QKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERL 322
V A Q +E +L + +M N+YV+NL ++ ++L
Sbjct: 391 EVRVAAVSSSGSNTSVQAISETDHQLTKEVDM-----------SNVYVQNLPLLMNTDKL 439
Query: 323 RKEFTPFGTITSAK 336
F P+G +TSAK
Sbjct: 440 LNLFLPYGKVTSAK 453
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/273 (29%), Positives = 131/273 (47%), Gaps = 26/273 (9%)
Query: 80 ALDTMNFDALKGR--PIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSI 137
A+ MN ++GR +R+ + S ++ + +++ NL + ++D F +G +
Sbjct: 286 AIKHMNGRMVEGRMLEVRLAGAPSSGSTKEMDMSKLYVCNLPLLLHEDKLHDLFVPYGQV 345
Query: 138 LSCKVAQDEQ-GNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFV-----------GK 185
S KV +D G SKGYGFV + + A +I ++NG L+ K + V
Sbjct: 346 TSVKVMRDHATGLSKGYGFVRYSDPQHAAHAIFQLNGHLIEGKKMEVRVAAVSSSGSNTS 405
Query: 186 FIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSR 243
E + +L ++ + +NVY++N N +KL +F PYG +TS +V + G S+
Sbjct: 406 VQAISETDHQLTKEVDM-SNVYVQNLPLLMNTDKLLNLFLPYGKVTSAKVAMDYTSGISK 464
Query: 244 GFGFVAYESPEFAEKAVQAWNGKEVDG-KILYVGRAQKKAERTQELKRRFEMLKIERLNR 302
G+GFV + P A AV NG V+G KIL R + R + + +
Sbjct: 465 GYGFVKFSDPHDAAHAVIELNGCLVEGRKILVRVRPPSSPVESHANNRTLKEIDMS---- 520
Query: 303 YQGVNLYVKNLDDSIDDERLRKEFTPFGTITSA 335
NLYV N+ S++ +L + F PFG IT A
Sbjct: 521 ----NLYVCNIPSSMNKAKLVELFLPFGRITHA 549
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 74/312 (23%), Positives = 134/312 (42%), Gaps = 40/312 (12%)
Query: 47 VKYDWDSGYTCHQLGSGAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPS-- 104
V D+ SG + G V+ P+ D A+ +N ++GR +I+ R PS
Sbjct: 454 VAMDYTSG-----ISKGYGFVKFSDPH--DAAHAVIELNGCLVEGR--KILVRVRPPSSP 504
Query: 105 ---------LRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGF 155
L++ + N+++ N+ S++ + + F FG I V + +SKGYGF
Sbjct: 505 VESHANNRTLKEIDMSNLYVCNIPSSMNKAKLVELFLPFGRITHAMVVEQSNNSSKGYGF 564
Query: 156 VHFETEEAANKSIEKVNGMLLNSKIVFV---------GKFIPRKEREKELGEKAKL-FTN 205
V F A +++ +NG L+ + + V + + E+ ++
Sbjct: 565 VKFADSHCAAEAVAMMNGALIEGETISVRVAGLSPSVSSSVSQHSPHSEINASPEINNCR 624
Query: 206 VYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNG 265
+Y+ N + + +KL +F P+G I VM + + FV Y A KA++ +G
Sbjct: 625 LYVTNLPQTMSADKLVSLFMPFGQIDRV-VMYAE-----YSFVLYADINSAAKALKHMDG 678
Query: 266 KEVDGKILYV-GRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRK 324
++GK L V G A Q + ++ ++ NLYV + ++ E+L +
Sbjct: 679 YLIEGKRLVVKGSEPLPANAAQSACSQSGSKLVKEIDM---ANLYVGRVPSAVTCEQLVQ 735
Query: 325 EFTPFGTITSAK 336
F +G I AK
Sbjct: 736 IFCLYGEIVQAK 747
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 77/181 (42%), Gaps = 18/181 (9%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIE 169
+ N+++ + ++ + + F +G I+ K GYG + + +A +I+
Sbjct: 716 MANLYVGRVPSAVTCEQLVQIFCLYGEIVQAKKFD------AGYGMIRYANASSAAAAID 769
Query: 170 KVNGMLLN-SKIVFVGKFIPRKEREKELGEKAKL---------FTNVYIKNFGEDFNDEK 219
++G + S +V +P + + TN+Y+ +K
Sbjct: 770 HLDGYQIGGSTLVVRVAGLPAESDVATFARTPQTPGNEHRQIDMTNLYVGYLPPYVTTDK 829
Query: 220 LKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGR 277
L E+F P G IT +V+ + G S+GFGFV + A A+ NG +DG +L V
Sbjct: 830 LIELFLPCGQITQAKVVVDKFTGVSKGFGFVRFADAYSAATAITHMNGYPLDGHMLAVRT 889
Query: 278 A 278
A
Sbjct: 890 A 890
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 93/232 (40%), Gaps = 20/232 (8%)
Query: 113 VFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVN 172
+++ NL +++ + F FG I D Y FV + +A K+++ ++
Sbjct: 625 LYVTNLPQTMSADKLVSLFMPFGQI-------DRVVMYAEYSFVLYADINSAAKALKHMD 677
Query: 173 GMLLNSKIVFV--GKFIPRKEREKELGEK-AKL-----FTNVYIKNFGEDFNDEKLKEMF 224
G L+ K + V + +P + + +KL N+Y+ E+L ++F
Sbjct: 678 GYLIEGKRLVVKGSEPLPANAAQSACSQSGSKLVKEIDMANLYVGRVPSAVTCEQLVQIF 737
Query: 225 EPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAER 284
YG I + + G+G + Y + A A+ +G ++ G L V A AE
Sbjct: 738 CLYGEIVQAKKFD-----AGYGMIRYANASSAAAAIDHLDGYQIGGSTLVVRVAGLPAES 792
Query: 285 TQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
R + NLYV L + ++L + F P G IT AK
Sbjct: 793 DVATFARTPQTPGNEHRQIDMTNLYVGYLPPYVTTDKLIELFLPCGQITQAK 844
>gi|321464409|gb|EFX75417.1| hypothetical protein DAPPUDRAFT_323341 [Daphnia pulex]
Length = 697
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 50/80 (62%), Positives = 65/80 (81%)
Query: 2 YTAQTVQLSEEGIIIPKHNVATRELSAKVVEGVSRSLSSLIDGNTVKYDWDSGYTCHQLG 61
Y + T+ E+ +I+PKHNVAT +LSA VVEGVSRS ++L++G+T YDWDSGYTCHQLG
Sbjct: 459 YYSPTIVRLEKELIVPKHNVATIQLSACVVEGVSRSRNALLNGDTKNYDWDSGYTCHQLG 518
Query: 62 SGAILVQLGQPYMLDTERAL 81
SGAI+VQL QPY++ + R L
Sbjct: 519 SGAIVVQLAQPYIVSSMRLL 538
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 47/75 (62%), Gaps = 4/75 (5%)
Query: 9 LSEEGIIIPKHNVATRELSAKVVEGVSRSLSSLIDGNTVKYDWDSGYTCHQL--GSGAIL 66
L G ++P+ NVA L A+V++G R+ +L+DG T YD + G+T H + G+ I+
Sbjct: 317 LPYRGQLMPEVNVAHSRLGAQVLQGEMRT--ALLDGETTNYDMERGFTRHPIEDGNVGIV 374
Query: 67 VQLGQPYMLDTERAL 81
V+LGQP +++ + L
Sbjct: 375 VRLGQPSIINHIKVL 389
>gi|403355493|gb|EJY77324.1| Polyadenylate-binding protein, cytoplasmic and nuclear [Oxytricha
trifallax]
Length = 590
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 90/278 (32%), Positives = 137/278 (49%), Gaps = 46/278 (16%)
Query: 84 MNFDALKGRPIRIMWSQRDPSLRKS---------GVGNVFIKNLDKSIDNKAMYDTFS-A 133
M + + G+P R + P L+K N+ ++NLDKSI ++ + + F+
Sbjct: 70 MKYFEINGKPCRAI-----PDLKKEFETLGNEMGQRNNLKVQNLDKSITSQQLDEIFAKV 124
Query: 134 FG--SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKE 191
FG ++LS KV+ + +S+GYGFV F + A +++ K + F + P +
Sbjct: 125 FGDDAVLSAKVSINSDYSSRGYGFVLFACPQLAEQALAKASE--------FNFEISPHQP 176
Query: 192 REKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDGKSRG------F 245
+++ E K F N+YI NF ++N EK++++F YGTI S + GK +G F
Sbjct: 177 KDRR--ELRKTFNNIYINNFPSNWNKEKIEQIFGQYGTIKSTVI--KMGKVQGTDQEAPF 232
Query: 246 GFVAYES-------PEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIE 298
FV YE P+ A A+ N KE DG LYV A K R QE KR K
Sbjct: 233 AFVCYEDKDNKEYGPKCALNAINQENDKEYDGIKLYVKEALPKTLREQEKKREQNRFK-- 290
Query: 299 RLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
N + NLYVKN ++ +E+L+ F +G I S K
Sbjct: 291 --NSKKRCNLYVKNFPENTTEEQLKAYFEKYGEIESIK 326
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 99/196 (50%), Gaps = 18/196 (9%)
Query: 105 LRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDE-QGNSK--GYGFVHFETE 161
LRK+ N++I N + + + + F +G+I S + + QG + + FV +E +
Sbjct: 182 LRKT-FNNIYINNFPSNWNKEKIEQIFGQYGTIKSTVIKMGKVQGTDQEAPFAFVCYEDK 240
Query: 162 E-------AANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLF------TNVYI 208
+ A +I + N + ++V + +P+ RE+E + F N+Y+
Sbjct: 241 DNKEYGPKCALNAINQENDKEYDGIKLYVKEALPKTLREQEKKREQNRFKNSKKRCNLYV 300
Query: 209 KNFGEDFNDEKLKEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEV 268
KNF E+ +E+LK FE YG I S ++ + +G + + FV Y++PE A A Q + +
Sbjct: 301 KNFPENTTEEQLKAYFEKYGEIESIKLNHKEGAA-VYAFVCYKNPESATYAKQQSQTQTL 359
Query: 269 DGKILYVGRAQKKAER 284
+GK L++ ++K R
Sbjct: 360 NGKQLFLNFYEQKEVR 375
>gi|355709046|gb|AES03463.1| poly binding protein, cytoplasmic 1 [Mustela putorius furo]
Length = 102
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 51/64 (79%), Positives = 57/64 (89%)
Query: 273 LYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTI 332
+YVGRAQKK ER ELKR+FE +K +R+ RYQGVNLYVKNLDD IDDERLRKEF+PFGTI
Sbjct: 1 IYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTI 60
Query: 333 TSAK 336
TSAK
Sbjct: 61 TSAK 64
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 60/101 (59%), Gaps = 10/101 (9%)
Query: 181 VFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKLKEMFEPYGTI 230
++VG+ + ER+ EL K + N+Y+KN + +DE+L++ F P+GTI
Sbjct: 1 IYVGRAQKKVERQTELKRKFEQMKQDRITRYQGVNLYVKNLDDGIDDERLRKEFSPFGTI 60
Query: 231 TSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGK 271
TS +VM G+S+GFGFV + SPE A KAV NG+ V K
Sbjct: 61 TSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVATK 101
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 52/80 (65%), Gaps = 2/80 (2%)
Query: 100 QRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFE 159
++D R GV N+++KNLD ID++ + FS FG+I S KV E G SKG+GFV F
Sbjct: 24 KQDRITRYQGV-NLYVKNLDDGIDDERLRKEFSPFGTITSAKVMM-EGGRSKGFGFVCFS 81
Query: 160 TEEAANKSIEKVNGMLLNSK 179
+ E A K++ ++NG ++ +K
Sbjct: 82 SPEEATKAVTEMNGRIVATK 101
>gi|432092097|gb|ELK24806.1| Polyadenylate-binding protein 4 [Myotis davidii]
Length = 179
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/74 (71%), Positives = 58/74 (78%), Gaps = 4/74 (5%)
Query: 58 HQLGSGAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKN 117
H LG I Q QP D ERALDTMNFD +KG+PI IMWSQRDPS+RKS VGN+FIK
Sbjct: 50 HSLGYAYINFQ--QP--ADAERALDTMNFDVIKGKPIHIMWSQRDPSVRKSAVGNIFIKK 105
Query: 118 LDKSIDNKAMYDTF 131
LDKSIDNKA+YDTF
Sbjct: 106 LDKSIDNKALYDTF 119
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 57/137 (41%), Gaps = 20/137 (14%)
Query: 203 FTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNND--GKSRGFGFVAYESPEFAEKAV 260
++Y+ + D D L E F P + S V +N S G+ ++ ++ P AE+A+
Sbjct: 10 MASLYVADLHWDVTDAMLYEQFSPARPVLSIWVCHNKIISHSLGYAYINFQQPADAERAL 69
Query: 261 QAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGV-NLYVKNLDDSIDD 319
N + GK +++ +Q+ R V N+++K LD SID+
Sbjct: 70 DTMNFDVIKGKPIHIMWSQRDPSV-----------------RKSAVGNIFIKKLDKSIDN 112
Query: 320 ERLRKEFTPFGTITSAK 336
+ L F T K
Sbjct: 113 KALYDTFLRLETFCPVK 129
>gi|403352466|gb|EJY75748.1| Polyadenylate-binding protein, cytoplasmic and nuclear [Oxytricha
trifallax]
Length = 678
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 92/280 (32%), Positives = 135/280 (48%), Gaps = 50/280 (17%)
Query: 84 MNFDALKGRPIRIMWSQRDPSLRKS---------GVGNVFIKNLDKSIDNKAMYDTFS-A 133
M + + G+P R + P L+ + N+FIKNLDKSI ++ + + F+
Sbjct: 70 MKYFEINGKPCRAI-----PDLKNTIQTLENKMGKRNNLFIKNLDKSITSQQLDEIFAKV 124
Query: 134 FG--SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVF-VGKFIPRK 190
FG ++LS KV+ + +S+GYGFV + A +++ K S+ F V + P
Sbjct: 125 FGEDAVLSAKVSVNADYSSRGYGFVCLACPQLAEQALAKA------SEFKFEVHPYHPED 178
Query: 191 EREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM----NNDGKSRGFG 246
RE K F +YIKNF ++N EK++++F YGTI S +M + F
Sbjct: 179 RRELR-----KSFNYIYIKNFPINWNKEKIEQIFGKYGTIKSTVIMMGIVQGTDEEAPFA 233
Query: 247 FVAYESPE-------FAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKR---RFEMLK 296
FV YE PE A+ A+ N KE DG L V K+ R QE +R RF
Sbjct: 234 FVCYEDPENKEYGPKCAQNAITQENDKEYDGVKLKVKDGLPKSIREQEKEREQNRF---- 289
Query: 297 IERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+N + NLYVKN D +E+L+ F +G I S K
Sbjct: 290 ---INSKKRCNLYVKNFPDDTTEEQLKAYFEKYGQIESIK 326
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 95/199 (47%), Gaps = 24/199 (12%)
Query: 105 LRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKV------AQDEQGNSKGYGFVHF 158
LRKS ++IKN + + + + F +G+I S + DE+ + FV +
Sbjct: 182 LRKS-FNYIYIKNFPINWNKEKIEQIFGKYGTIKSTVIMMGIVQGTDEEA---PFAFVCY 237
Query: 159 ETEE-------AANKSIEKVNGMLLNSKIVFVGKFIPR------KEREKELGEKAKLFTN 205
E E A +I + N + + V +P+ KERE+ +K N
Sbjct: 238 EDPENKEYGPKCAQNAITQENDKEYDGVKLKVKDGLPKSIREQEKEREQNRFINSKKRCN 297
Query: 206 VYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNG 265
+Y+KNF +D +E+LK FE YG I S ++ +G + + FV Y+SPE A A Q
Sbjct: 298 LYVKNFPDDTTEEQLKAYFEKYGQIESIKLNYKEGAA-VYAFVCYKSPESAIYAKQQSQT 356
Query: 266 KEVDGKILYVGRAQKKAER 284
+ ++GK L++ ++K R
Sbjct: 357 QTLNGKQLFLNYYEQKEVR 375
>gi|307215202|gb|EFN89974.1| BTB/POZ domain-containing protein 9 [Harpegnathos saltator]
Length = 602
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 51/80 (63%), Positives = 63/80 (78%), Gaps = 1/80 (1%)
Query: 2 YTAQTVQLSEEGIIIPKHNVATRELSAKVVEGVSRSLSSLIDGNTVKYDWDSGYTCHQLG 61
YT T +LS+ G ++P NVA E SA V+EGVSRS ++L++G+T YDWDSGYTCHQLG
Sbjct: 404 YTNHTEELSD-GFVVPTQNVAVAERSACVIEGVSRSRNNLLNGDTSNYDWDSGYTCHQLG 462
Query: 62 SGAILVQLGQPYMLDTERAL 81
SGAILVQLGQPYM+ + R L
Sbjct: 463 SGAILVQLGQPYMIHSMRLL 482
Score = 38.9 bits (89), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 43/77 (55%), Gaps = 5/77 (6%)
Query: 8 QLSEEGIIIPKHNVATRELSAKVVEGVSRSLSSLIDGNTVKYDWDSGYTCHQLGSGA--- 64
+L G ++ NVA A+V++G RS L++G+T+ YD + GYT H + A
Sbjct: 259 ELEYRGRLLVDENVAHPMHGAQVLQGEMRSY--LLNGDTINYDMERGYTRHTITESAEQG 316
Query: 65 ILVQLGQPYMLDTERAL 81
IL++LG +++ + L
Sbjct: 317 ILIKLGTQCIINHVKML 333
>gi|431916798|gb|ELK16558.1| BTB/POZ domain-containing protein 9 [Pteropus alecto]
Length = 185
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 54/98 (55%), Positives = 70/98 (71%), Gaps = 3/98 (3%)
Query: 1 MYTAQTVQLSEEGIIIPKHNVATRELSAKVVEGVSRSLSSLIDGNTVKYDWDSGYTCHQL 60
M+T +T L E+G+I+P NVAT A V+EGVSRS ++L++G+T YDWDSGYTCHQL
Sbjct: 74 MFTNKTFTL-EKGLIVPMENVATIADCASVIEGVSRSRNALLNGDTKNYDWDSGYTCHQL 132
Query: 61 GSGAILVQLGQPYMLDTERALDTM--NFDALKGRPIRI 96
GSGAI+VQL QPYM+ + R L FD++ P RI
Sbjct: 133 GSGAIVVQLAQPYMIGSIRHLPQCYHKFDSIMPLPKRI 170
>gi|147835778|emb|CAN72942.1| hypothetical protein VITISV_011270 [Vitis vinifera]
Length = 185
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 52/96 (54%), Positives = 66/96 (68%), Gaps = 5/96 (5%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFG 135
D RALD +NF L G+P+RIM+S DPS+RKSG GN+FIKNLDK ID+KA++DTFSAFG
Sbjct: 83 DAARALDVLNFTPLNGKPLRIMYSHCDPSIRKSGTGNIFIKNLDKGIDHKALHDTFSAFG 142
Query: 136 SILSCKVAQDEQGNSKGYGF-----VHFETEEAANK 166
+ILSCK Q N + + + HF A+ K
Sbjct: 143 NILSCKDLDTYQNNMRLHPWESPSEPHFPYLPASPK 178
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 64/136 (47%), Gaps = 20/136 (14%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQ 261
T++Y+ + + ND +L ++F G + S RV + +S G+G+V Y +P+ A +A+
Sbjct: 30 TSLYVGDLELNVNDPQLYDLFNQMGAVVSVRVCRDLSTRRSLGYGYVNYSNPQDAARALD 89
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGV-NLYVKNLDDSIDDE 320
N ++GK L R + R G N+++KNLD ID +
Sbjct: 90 VLNFTPLNGKPL-----------------RIMYSHCDPSIRKSGTGNIFIKNLDKGIDHK 132
Query: 321 RLRKEFTPFGTITSAK 336
L F+ FG I S K
Sbjct: 133 ALHDTFSAFGNILSCK 148
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 71/144 (49%), Gaps = 11/144 (7%)
Query: 113 VFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQD-EQGNSKGYGFVHFETEEAANKSIEKV 171
+++ +L+ ++++ +YD F+ G+++S +V +D S GYG+V++ + A ++++ +
Sbjct: 32 LYVGDLELNVNDPQLYDLFNQMGAVVSVRVCRDLSTRRSLGYGYVNYSNPQDAARALDVL 91
Query: 172 NGMLLNSKIV-FVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTI 230
N LN K + + R+ G N++IKN + + + L + F +G I
Sbjct: 92 NFTPLNGKPLRIMYSHCDPSIRKSGTG-------NIFIKNLDKGIDHKALHDTFSAFGNI 144
Query: 231 TSYRVMNNDGKSRGFGFVAYESPE 254
S + + D +ESP
Sbjct: 145 LSCKDL--DTYQNNMRLHPWESPS 166
>gi|322789699|gb|EFZ14865.1| hypothetical protein SINV_00396 [Solenopsis invicta]
Length = 608
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 51/80 (63%), Positives = 64/80 (80%), Gaps = 1/80 (1%)
Query: 2 YTAQTVQLSEEGIIIPKHNVATRELSAKVVEGVSRSLSSLIDGNTVKYDWDSGYTCHQLG 61
YT T +LS+ G I+P N+AT E SA V+EGVSRS ++L++G+T YDWDSGYTCHQLG
Sbjct: 406 YTNHTEKLSQ-GFIVPTKNIATIERSACVIEGVSRSRNNLLNGDTSTYDWDSGYTCHQLG 464
Query: 62 SGAILVQLGQPYMLDTERAL 81
SG+ILVQLGQPYM+ + R L
Sbjct: 465 SGSILVQLGQPYMIASMRLL 484
>gi|123446312|ref|XP_001311908.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121893735|gb|EAX98978.1| hypothetical protein TVAG_431870 [Trichomonas vaginalis G3]
Length = 574
Score = 107 bits (267), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 72/224 (32%), Positives = 116/224 (51%), Gaps = 12/224 (5%)
Query: 76 DTERALDTMNFDALKGRPIRIMWSQRDP--SLRKSGVGNVFIKNLDKSIDNKAMYDTFSA 133
+ E A+ N+ L G I I+ P S SG GN+FIK LD+SID +++ F+
Sbjct: 63 EAETAVRDFNYTKLNGETI-IVTRTTAPVVSAISSGQGNLFIKGLDESIDCLQLHELFAN 121
Query: 134 FGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKERE 193
+G I+SC++ G +G+G+V F +E A +++++ +N K + +G F+ R ER
Sbjct: 122 YGEIVSCRIP-TLNGQPRGFGYVQFLKQEDAEHAMKELADSTVNGKPIQIGPFLKRSERP 180
Query: 194 KELGEKAKL---FTNVYIKNFGEDFND-EKLKEMFEPYGTITSYRVMNNDGKSRGFGFVA 249
+ L FTNV++KN ++ N L +F +G +TS R++ R G+V
Sbjct: 181 LSAAFQNNLDSSFTNVFVKNLPDNINTLLSLLRLFHEFGDVTSARIV----PERHIGYVM 236
Query: 250 YESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFE 293
E A +AV G+ + GK L V R+ AER +K+ E
Sbjct: 237 MSEHEAAVRAVVGLCGRTIFGKRLSVCRSLSPAERANFIKKPIE 280
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 108/227 (47%), Gaps = 20/227 (8%)
Query: 113 VFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVN 172
+ + NL ++ + + FS G++++ + +Q + Y FV F +E A ++ N
Sbjct: 16 IHVANLPPTVTVEFLKSLFSEAGTVINVIL---KQKPTSCYAFVDFTLQEEAETAVRDFN 72
Query: 173 GMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITS 232
LN + + V + G+ N++IK E + +L E+F YG I S
Sbjct: 73 YTKLNGETIIVTRTTAPVVSAISSGQG-----NLFIKGLDESIDCLQLHELFANYGEIVS 127
Query: 233 YRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRF 292
R+ +G+ RGFG+V + E AE A++ V+GK + +G K++ER L F
Sbjct: 128 CRIPTLNGQPRGFGYVQFLKQEDAEHAMKELADSTVNGKPIQIGPFLKRSERP--LSAAF 185
Query: 293 EMLKIERLNRYQG--VNLYVKNLDDSIDD-ERLRKEFTPFGTITSAK 336
+ N N++VKNL D+I+ L + F FG +TSA+
Sbjct: 186 Q-------NNLDSSFTNVFVKNLPDNINTLLSLLRLFHEFGDVTSAR 225
>gi|357622576|gb|EHJ74003.1| hypothetical protein KGM_13514 [Danaus plexippus]
Length = 716
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 49/81 (60%), Positives = 64/81 (79%), Gaps = 1/81 (1%)
Query: 1 MYTAQTVQLSEEGIIIPKHNVATRELSAKVVEGVSRSLSSLIDGNTVKYDWDSGYTCHQL 60
M+T++ L E G++ P HNVAT ELSA V+EG+SRS ++L++G+T YDW+ GYTCHQL
Sbjct: 420 MHTSRVPPLCE-GLVRPVHNVATLELSAVVIEGISRSRNALLNGDTEHYDWEQGYTCHQL 478
Query: 61 GSGAILVQLGQPYMLDTERAL 81
GSGAI+VQL QPYML + R L
Sbjct: 479 GSGAIVVQLAQPYMLSSLRML 499
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 48/83 (57%), Gaps = 6/83 (7%)
Query: 3 TAQTVQLSEEGIIIPKHNVATRELSAKVVEGVSRSLSSLIDGNTVKYDWDSGYTCHQLGS 62
T +T L G+++P+ NVAT + A+V+ G R S+L+DGN+ YD + GYT H +
Sbjct: 270 TTRTTDLRHRGLLVPEENVATPKRGARVISGDMR--SALLDGNSDNYDMERGYTRHNISD 327
Query: 63 GA----ILVQLGQPYMLDTERAL 81
A I+V+L +++ R L
Sbjct: 328 AADNPGIVVRLATTTIINHIRLL 350
>gi|296081049|emb|CBI18330.3| unnamed protein product [Vitis vinifera]
Length = 145
Score = 107 bits (266), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 51/87 (58%), Positives = 61/87 (70%), Gaps = 2/87 (2%)
Query: 66 LVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNK 125
V G P DT RALD +NF L G+P RIM+S DPS+RKSG N+FIKNLDK +D+K
Sbjct: 60 CVNHGNPQ--DTVRALDVLNFTHLNGKPTRIMYSHCDPSVRKSGTRNIFIKNLDKRVDHK 117
Query: 126 AMYDTFSAFGSILSCKVAQDEQGNSKG 152
A+ DTFS FG+I SCKVA D G+ G
Sbjct: 118 ALRDTFSTFGNIFSCKVAADASGSYSG 144
Score = 38.1 bits (87), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 25/124 (20%), Positives = 59/124 (47%), Gaps = 7/124 (5%)
Query: 113 VFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQD-EQGNSKGYGFVHFETEEAANKSIEKV 171
+++ L+ ++ + ++D F G ++S ++ D S YG V+ + ++++ +
Sbjct: 17 LYVGGLESNVTDSHLFDLFGQLGPVVSVQICCDLSTRRSLNYGCVNHGNPQDTVRALDVL 76
Query: 172 NGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTIT 231
N LN K + + ++ G + N++IKN + + + L++ F +G I
Sbjct: 77 NFTHLNGKPTRI-MYSHCDPSVRKSGTR-----NIFIKNLDKRVDHKALRDTFSTFGNIF 130
Query: 232 SYRV 235
S +V
Sbjct: 131 SCKV 134
>gi|351699217|gb|EHB02136.1| Polyadenylate-binding protein 4 [Heterocephalus glaber]
Length = 205
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 51/72 (70%), Positives = 56/72 (77%), Gaps = 2/72 (2%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSI 122
G V QP + ERALDTMNFD +KG+ I IMW Q+DPSL KSGVGNVFIKNLDKSI
Sbjct: 53 GHAYVSFQQP--AEAERALDTMNFDGIKGKQIYIMWPQKDPSLTKSGVGNVFIKNLDKSI 110
Query: 123 DNKAMYDTFSAF 134
DNKA+YDTFSA
Sbjct: 111 DNKALYDTFSAL 122
Score = 44.7 bits (104), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 57/129 (44%), Gaps = 20/129 (15%)
Query: 204 TNVYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNN--DGKSRGFGFVAYESPEFAEKAVQ 261
++ + + D + L E F G + RV + +S G +V+++ P AE+A+
Sbjct: 11 ASLSVGDLHSDAAEAVLYEKFSRAGPVLPIRVCGDVITRRSLGHAYVSFQQPAEAERALD 70
Query: 262 AWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGV-NLYVKNLDDSIDDE 320
N + GK +Y+ QK T+ GV N+++KNLD SID++
Sbjct: 71 TMNFDGIKGKQIYIMWPQKDPSLTKS-----------------GVGNVFIKNLDKSIDNK 113
Query: 321 RLRKEFTPF 329
L F+
Sbjct: 114 ALYDTFSAL 122
>gi|50345054|ref|NP_001002198.1| BTB/POZ domain-containing protein 9 [Danio rerio]
gi|49257523|gb|AAH74031.1| BTB (POZ) domain containing 9 [Danio rerio]
Length = 602
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 49/81 (60%), Positives = 63/81 (77%), Gaps = 1/81 (1%)
Query: 1 MYTAQTVQLSEEGIIIPKHNVATRELSAKVVEGVSRSLSSLIDGNTVKYDWDSGYTCHQL 60
MYT + L E+G+++P NVAT + A VVEGVSRS ++L++G+T YDWDSGYTCHQL
Sbjct: 410 MYTLRPFTL-EKGLLVPTENVATVQACASVVEGVSRSRNALLNGDTSHYDWDSGYTCHQL 468
Query: 61 GSGAILVQLGQPYMLDTERAL 81
GSGAI++QL QPYML + R L
Sbjct: 469 GSGAIVIQLAQPYMLGSMRLL 489
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 51/82 (62%), Gaps = 6/82 (7%)
Query: 4 AQTVQLSEEGIIIPKHNVATRELSAKVVEGVSRSLSSLIDGNTVKYDWDSGYTCHQLG-- 61
++ + L+ G++IP+ N+AT + A VV+G + S+L+DG+T YD D G++ H +
Sbjct: 261 SRDMDLNYRGMLIPEENIATMKHGAVVVKGELK--SALLDGDTQNYDLDHGFSRHPIEEE 318
Query: 62 --SGAILVQLGQPYMLDTERAL 81
+ I V+LGQP +++ R L
Sbjct: 319 GRAAGIQVRLGQPSIVNHIRLL 340
>gi|23197794|gb|AAN15424.1| Strong similarity to poly(A)-binding protein (PABP5) [Arabidopsis
thaliana]
Length = 379
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/141 (41%), Positives = 86/141 (60%), Gaps = 11/141 (7%)
Query: 167 SIEKVNGMLLNSKIVFVGKFIPRKEREKEL-----GEKAKLF-----TNVYIKNFGEDFN 216
++EK+NG+ L +++VG+ + ERE+EL E+ F N+Y+KN + +
Sbjct: 4 AVEKMNGISLGDDVLYVGRAQKKSEREEELRRKFEQERINRFEKSQGANLYLKNLDDSVD 63
Query: 217 DEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYV 275
DEKLKEMF YG +TS +VM N G SRGFGFVAY +PE A +A+ NGK + K LY+
Sbjct: 64 DEKLKEMFSEYGNVTSSKVMLNPQGMSRGFGFVAYSNPEEALRALSEMNGKMIGRKPLYI 123
Query: 276 GRAQKKAERTQELKRRFEMLK 296
AQ+K +R L+ F ++
Sbjct: 124 ALAQRKEDRRAHLQALFSQIR 144
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 42/78 (53%), Positives = 60/78 (76%)
Query: 259 AVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSID 318
AV+ NG + +LYVGRAQKK+ER +EL+R+FE +I R + QG NLY+KNLDDS+D
Sbjct: 4 AVEKMNGISLGDDVLYVGRAQKKSEREEELRRKFEQERINRFEKSQGANLYLKNLDDSVD 63
Query: 319 DERLRKEFTPFGTITSAK 336
DE+L++ F+ +G +TS+K
Sbjct: 64 DEKLKEMFSEYGNVTSSK 81
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 61/100 (61%), Gaps = 3/100 (3%)
Query: 107 KSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANK 166
KS N+++KNLD S+D++ + + FS +G++ S KV + QG S+G+GFV + E A +
Sbjct: 47 KSQGANLYLKNLDDSVDDEKLKEMFSEYGNVTSSKVMLNPQGMSRGFGFVAYSNPEEALR 106
Query: 167 SIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNV 206
++ ++NG ++ K +++ +++R L LF+ +
Sbjct: 107 ALSEMNGKMIGRKPLYIALAQRKEDRRAHL---QALFSQI 143
>gi|443717636|gb|ELU08603.1| hypothetical protein CAPTEDRAFT_220698 [Capitella teleta]
Length = 627
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 51/81 (62%), Positives = 64/81 (79%), Gaps = 1/81 (1%)
Query: 1 MYTAQTVQLSEEGIIIPKHNVATRELSAKVVEGVSRSLSSLIDGNTVKYDWDSGYTCHQL 60
M++ +TV+L E GII+P+ NVAT SA VVEGVSR ++LI+G+ YDWDSGYTCHQL
Sbjct: 413 MFSKKTVEL-EGGIIVPRENVATIRHSACVVEGVSRCRNALINGDIQNYDWDSGYTCHQL 471
Query: 61 GSGAILVQLGQPYMLDTERAL 81
GSGAI+VQL QPY+L + R L
Sbjct: 472 GSGAIVVQLAQPYVLSSMRLL 492
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 47/83 (56%), Gaps = 6/83 (7%)
Query: 3 TAQTVQLSEEGIIIPKHNVATRELSAKVVEGVSRSLSSLIDGNTVKYDWDSGYTCHQLGS 62
T + +LS G ++P+ N+AT A+V+ G + S+L+DG+ YD D G++ H +
Sbjct: 263 THRDTELSYRGSLVPEENIATLRHGAQVIRGEMK--SALLDGDFNNYDLDRGFSRHPIDD 320
Query: 63 G----AILVQLGQPYMLDTERAL 81
I+VQLG +++T R L
Sbjct: 321 NNPQQGIVVQLGSASIINTIRLL 343
>gi|340377535|ref|XP_003387285.1| PREDICTED: BTB/POZ domain-containing protein 9-like [Amphimedon
queenslandica]
Length = 591
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 47/81 (58%), Positives = 64/81 (79%)
Query: 1 MYTAQTVQLSEEGIIIPKHNVATRELSAKVVEGVSRSLSSLIDGNTVKYDWDSGYTCHQL 60
++T++ LS++G+IIP NVA+ SA V+EGVSRS ++L++GNT YDWDSGYTCHQL
Sbjct: 428 LHTSRRFSLSKDGLIIPDENVASISTSATVLEGVSRSRNALLNGNTRDYDWDSGYTCHQL 487
Query: 61 GSGAILVQLGQPYMLDTERAL 81
GSG I++QL QPY++ T R L
Sbjct: 488 GSGYIIIQLAQPYVISTMRLL 508
Score = 45.4 bits (106), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 45/79 (56%), Gaps = 8/79 (10%)
Query: 7 VQLSEEGIIIPKHNVATRELSAKVVEGVSRSLSSLIDGNTVKYDWDSGYTCHQLG----S 62
++L++ G+++P+ NVAT + A VS + + L+ G+T Y D GY H + S
Sbjct: 284 IELNQRGLLLPEENVATVQHDAT----VSDNQTILLSGDTESYTGDHGYAIHTITRNGPS 339
Query: 63 GAILVQLGQPYMLDTERAL 81
I+V L QPY+++ + L
Sbjct: 340 KGIIVGLNQPYIINCIKML 358
>gi|432101459|gb|ELK29641.1| Polyadenylate-binding protein 4 [Myotis davidii]
Length = 146
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 48/73 (65%), Positives = 61/73 (83%)
Query: 264 NGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLR 323
NGK++ GK++ VG AQK E+ ELK +FE LK ER++RYQGVNLY+KNLDD++ DE LR
Sbjct: 2 NGKDISGKVISVGCAQKTVEQQAELKWKFEQLKQERISRYQGVNLYIKNLDDTVGDENLR 61
Query: 324 KEFTPFGTITSAK 336
KEF+PFG+ITSAK
Sbjct: 62 KEFSPFGSITSAK 74
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/128 (37%), Positives = 72/128 (56%), Gaps = 11/128 (8%)
Query: 171 VNGMLLNSKIVFVGKFIPRKEREKELGEKAKLF----------TNVYIKNFGEDFNDEKL 220
+NG ++ K++ VG E++ EL K + N+YIKN + DE L
Sbjct: 1 MNGKDISGKVISVGCAQKTVEQQAELKWKFEQLKQERISRYQGVNLYIKNLDDTVGDENL 60
Query: 221 KEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQK 280
++ F P+G+ITS +VM DG+S+GFGFV + SPE A KAV NG + K LYV A++
Sbjct: 61 RKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPE-AIKAVTKMNGCVMSSKPLYVALARR 119
Query: 281 KAERTQEL 288
+ + + L
Sbjct: 120 RGKGSAYL 127
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 53/78 (67%), Gaps = 3/78 (3%)
Query: 106 RKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAAN 165
R GV N++IKNLD ++ ++ + FS FGSI S KV E G SKG+GFV F + EA
Sbjct: 40 RYQGV-NLYIKNLDDTVGDENLRKEFSPFGSITSAKVML-EDGRSKGFGFVCFSSPEAI- 96
Query: 166 KSIEKVNGMLLNSKIVFV 183
K++ K+NG +++SK ++V
Sbjct: 97 KAVTKMNGCVMSSKPLYV 114
>gi|331243001|ref|XP_003334145.1| hypothetical protein PGTG_15382 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309313135|gb|EFP89726.1| hypothetical protein PGTG_15382 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 311
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/223 (31%), Positives = 112/223 (50%), Gaps = 15/223 (6%)
Query: 78 ERALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSI 137
+ A+ N G+P R+M +R ++ NVF+++L ++ A +DTF+ FG I
Sbjct: 84 DEAIREYNHTKFAGKPCRVMKPKRG-IVKGPPEANVFVQDLPLALSALAFHDTFAEFGEI 142
Query: 138 LSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLN--------SKIVFVGKFIPR 189
LS +++ D + SKGYGF+ + T E A +I + NG LL+ +FV K P
Sbjct: 143 LSSRLSVDRENVSKGYGFIQYATVEQAQAAIAETNGSLLDVAGGEKPIRTSIFVKKDAPS 202
Query: 190 KEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSYRV-MNNDGKSRGFGFV 248
+ A+ F N++ KN D E K + YG ITS + ++ DGK G F
Sbjct: 203 SPTSR---AAAREFKNLFFKNLPADITLEAFKATWSKYGVITSAVLTVDEDGKPTGTAFA 259
Query: 249 AYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRR 291
++++ A + ++A K D +Y RA KAERT+ R+
Sbjct: 260 SFQNHSDAVRVIKATQRKGPDE--VYAVRALSKAERTRYKSRK 300
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/227 (22%), Positives = 102/227 (44%), Gaps = 15/227 (6%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQG--NSKGYGFVHFETEEAANKSIE 169
+V++ +L +I + + FS +LS ++ + + Y ++ + + + +++I
Sbjct: 29 SVYVGDLPANITEEELIKVFSQASPVLSVQIKFPSRSVKGPRAYAYIAYSSADKVDEAIR 88
Query: 170 KVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGT 229
+ N K V K P++ K E NV++++ + + F +G
Sbjct: 89 EYNHTKFAGKPCRVMK--PKRGIVKGPPE-----ANVFVQDLPLALSALAFHDTFAEFGE 141
Query: 230 ITSYRV-MNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQEL 288
I S R+ ++ + S+G+GF+ Y + E A+ A+ E +G +L V +K + +
Sbjct: 142 ILSSRLSVDRENVSKGYGFIQYATVEQAQAAIA-----ETNGSLLDVAGGEKPIRTSIFV 196
Query: 289 KRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSA 335
K+ R + NL+ KNL I E + ++ +G ITSA
Sbjct: 197 KKDAPSSPTSRAAAREFKNLFFKNLPADITLEAFKATWSKYGVITSA 243
>gi|403336206|gb|EJY67291.1| Polyadenylate-binding protein [Oxytricha trifallax]
Length = 494
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/240 (33%), Positives = 121/240 (50%), Gaps = 30/240 (12%)
Query: 112 NVFIKNLDKSIDNKAMYDTFS-AFG--SILSCKVAQDEQGNSKGYGFVHFETEEAANKSI 168
N+ ++NLDKSI ++ + + F+ FG ++LS KV+ + +S+GYG V F + A +++
Sbjct: 6 NLKVQNLDKSITSQQLDEIFAKVFGDDAVLSAKVSINSDYSSRGYGQVIFACPQLAEQAL 65
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
K + + P+ RE K F N+YIKNF ++N E+++++F YG
Sbjct: 66 AKAGEFNFQ-----ISPYQPKDRRELR-----KSFNNIYIKNFPSNWNKEQIEQIFGKYG 115
Query: 229 TITSYRVM----NNDGKSRGFGFVAYESPE-------FAEKAVQAWNGKEVDGKILYVGR 277
TI S +M + F FV YE PE A+ A+ N +E DG LYV
Sbjct: 116 TIKSTVIMMGIVQGTDEEAPFAFVCYEDPENKEYGPKCAQNAITLENDQEYDGFKLYVKA 175
Query: 278 AQKKAERTQELKRRFEMLKIERLNRY-QGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
A R QE K ++ R Y +G NLYVKN D +E+L+ F +G I S K
Sbjct: 176 ALPMTLREQEKK-----IEQNRFKNYKKGCNLYVKNFPDDTTEEQLQAYFENYGEIESIK 230
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 93/199 (46%), Gaps = 24/199 (12%)
Query: 105 LRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKV------AQDEQGNSKGYGFVHF 158
LRKS N++IKN + + + + F +G+I S + DE+ + FV +
Sbjct: 86 LRKS-FNNIYIKNFPSNWNKEQIEQIFGKYGTIKSTVIMMGIVQGTDEEA---PFAFVCY 141
Query: 159 ETEE-------AANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLF------TN 205
E E A +I N + ++V +P RE+E + F N
Sbjct: 142 EDPENKEYGPKCAQNAITLENDQEYDGFKLYVKAALPMTLREQEKKIEQNRFKNYKKGCN 201
Query: 206 VYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNG 265
+Y+KNF +D +E+L+ FE YG I S ++ + DGK+ + FV Y+ PE A A Q
Sbjct: 202 LYVKNFPDDTTEEQLQAYFENYGEIESIKLNHKDGKAV-YAFVCYKDPESAAFAKQQSQT 260
Query: 266 KEVDGKILYVGRAQKKAER 284
+ GK L++ ++K R
Sbjct: 261 ETFHGKQLFINFYEQKEVR 279
>gi|320581163|gb|EFW95384.1| poly(A) binding protein [Ogataea parapolymorpha DL-1]
Length = 716
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 121/249 (48%), Gaps = 39/249 (15%)
Query: 80 ALDTMNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILS 139
A++++N+ + IRIM S RD S R+ NVF+ NL + + +YD F G++LS
Sbjct: 237 AMESLNYTTIGSSEIRIMPSLRDKSQRERIGANVFLSNLSSHLTTRQLYDRFRKHGNVLS 296
Query: 140 CKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKERE------ 193
CK +SK F+HFE++E A + ++ N L+ ++V+VG I +K+RE
Sbjct: 297 CKY-----DSSKQQAFIHFESKEVAYEVVKTYNHTTLDGRLVYVGLHILKKDRELFGATA 351
Query: 194 ---KELGEK---------AKLFTN------------VYIKNFGEDFNDEKLKEMFEPYGT 229
+L EK + F N ++++N + + +K + EPYG
Sbjct: 352 SASSKLTEKRDISQIPTFSPTFQNTKHKNDISTHYSIFVRNLPLNIEEHVIKSLVEPYGP 411
Query: 230 ITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAE----RT 285
+ S K+ + V + E +KAV N E++ + L+V RA K E R
Sbjct: 412 VLSVLARKVPKKNGCWALVTLSNQESVDKAVSHLNMVEINKQQLFVTRAIPKEEKSYSRK 471
Query: 286 QELKRRFEM 294
QE++ ++++
Sbjct: 472 QEVQPKYKL 480
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 121/247 (48%), Gaps = 31/247 (12%)
Query: 110 VGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQ-GNSKGYGFVHFETEEAANKSI 168
V ++F+ +LDKS+ + + F+ + +LS K+ D Q GNS GYG+V++ E+ AN ++
Sbjct: 179 VTSLFVGDLDKSLSELDLKNVFNKYPGLLSVKIPADCQTGNSLGYGYVNYSNEDQANFAM 238
Query: 169 EKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYG 228
E +N + S + + + K + + +G NV++ N +L + F +G
Sbjct: 239 ESLNYTTIGSSEIRIMPSLRDKSQRERIG------ANVFLSNLSSHLTTRQLYDRFRKHG 292
Query: 229 TITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAER---- 284
+ S + S+ F+ +ES E A + V+ +N +DG+++YVG K +R
Sbjct: 293 NVLSCKY----DSSKQQAFIHFESKEVAYEVVKTYNHTTLDGRLVYVGLHILKKDRELFG 348
Query: 285 -----TQELKRRFEMLKIERLN-RYQGV----------NLYVKNLDDSIDDERLRKEFTP 328
+ +L + ++ +I + +Q +++V+NL +I++ ++ P
Sbjct: 349 ATASASSKLTEKRDISQIPTFSPTFQNTKHKNDISTHYSIFVRNLPLNIEEHVIKSLVEP 408
Query: 329 FGTITSA 335
+G + S
Sbjct: 409 YGPVLSV 415
>gi|301606181|ref|XP_002932728.1| PREDICTED: polyadenylate-binding protein 1-B-like [Xenopus
(Silurana) tropicalis]
Length = 447
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 106/193 (54%), Gaps = 17/193 (8%)
Query: 107 KSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANK 166
K+ +++KN K ID D F G+ S K+ ++ G +G + F ++ A +
Sbjct: 40 KTKTCPIYVKNFVKEIDED---DFFGKCGA--STKIINNDCGQQTEFGLLPFNKQKDAIR 94
Query: 167 SIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLF-------TNVYIKNFGEDFNDEK 219
+++K+ GM +++ + +++R+ E +K + N+Y+KN + +D +
Sbjct: 95 AVDKMKGM-----DIYLAQAKIKEKRQTEFSKKPEPLHKPRYNSVNLYVKNLSYEIDDYR 149
Query: 220 LKEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQ 279
LK+ F P+GTITS +VM G+S+GFGFV + +P A KA+ NGK + K LYV AQ
Sbjct: 150 LKKEFAPFGTITSAKVMREGGRSKGFGFVCFSTPAEARKALSEMNGKILASKPLYVAWAQ 209
Query: 280 KKAERTQELKRRF 292
+K ER L +++
Sbjct: 210 RKQERQVSLAQQY 222
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/182 (34%), Positives = 94/182 (51%), Gaps = 23/182 (12%)
Query: 156 VHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDF 215
VHFE + A + + V+ +L S + E + K K +Y+KNF ++
Sbjct: 5 VHFEIQVEAKRVVHAVDVLLNESGM--------SDEHVNDTESKTKT-CPIYVKNFVKEI 55
Query: 216 NDEKLKEMFEPYGTITSYRVMNND-GKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILY 274
+++ + F G S +++NND G+ FG + + + A +AV G ++ Y
Sbjct: 56 DED---DFFGKCGA--STKIINNDCGQQTEFGLLPFNKQKDAIRAVDKMKGMDI-----Y 105
Query: 275 VGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITS 334
+ +A+ K +R E ++ E L RY VNLYVKNL IDD RL+KEF PFGTITS
Sbjct: 106 LAQAKIKEKRQTEFSKKPEPL---HKPRYNSVNLYVKNLSYEIDDYRLKKEFAPFGTITS 162
Query: 335 AK 336
AK
Sbjct: 163 AK 164
>gi|403355351|gb|EJY77251.1| Polyadenylate-binding protein, cytoplasmic and nuclear [Oxytricha
trifallax]
Length = 712
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/212 (35%), Positives = 116/212 (54%), Gaps = 25/212 (11%)
Query: 131 FSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPR- 189
F FG ++S KV+ D SKGYG+V F + A K++E +NG ++IV K
Sbjct: 95 FKQFGEVVSAKVSIDANHQSKGYGYVQFSQKSNALKAMEMMNGKTFGNEIVLSVKLYNSS 154
Query: 190 --KEREKELGEKAKLFTNVYIKNFGE-DFNDEKLKEMFEPYGTITSYRVM-NNDGKSRGF 245
KE+ K K+ N+Y+KNF DF D++L YG + + ++M ++ G ++GF
Sbjct: 155 LVKEKSK------KVQNNLYVKNFPTLDFTDQELH-----YGPLINAQIMKDSQGNTKGF 203
Query: 246 GFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIERLNRYQG 305
GFV ++S E A+KA+Q + +YV AQ K ER EL+R+ L ++ YQ
Sbjct: 204 GFVCFQSAEDAQKALQDISSTTQ----IYVTEAQSKEERMSELQRK--NLSFKKSTMYQ- 256
Query: 306 VNLYVKNLDDS-IDDERLRKEFTPFGTITSAK 336
NLYVK D + I D+ L+ F +G + +AK
Sbjct: 257 -NLYVKGFDKNIITDDLLKIHFEAYGEVKNAK 287
>gi|66564756|ref|XP_395842.2| PREDICTED: BTB/POZ domain-containing protein 9 [Apis mellifera]
Length = 617
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 66/182 (36%), Positives = 95/182 (52%), Gaps = 24/182 (13%)
Query: 2 YTAQTVQLSEEGIIIPKHNVATRELSAKVVEGVSRSLSSLIDGNTVKYDWDSGYTCHQLG 61
YT T +L G +IP NVAT + SA V EGV RS ++L++G+T YDWDSGYTCHQ+G
Sbjct: 411 YTNHTEKL-HNGFVIPTRNVATMDQSATVTEGVCRSRNALLNGDTSNYDWDSGYTCHQVG 469
Query: 62 SGAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPS----LRKSGVGNVFIKN 117
SG+ILVQLGQPY++D+ R L +W D S + SG ++
Sbjct: 470 SGSILVQLGQPYIIDSMRLL---------------LWDCDDRSYSYYIEVSGNSWSWVLV 514
Query: 118 LDKSIDNKAMYDT--FSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGML 175
DK+ + + T F ++ ++ ++ + VHFE N I VN +
Sbjct: 515 ADKTREACRSWQTIHFEPARPVVFIRIVGTHNTANEVFHCVHFECPAQVNDKI--VNKSM 572
Query: 176 LN 177
+N
Sbjct: 573 VN 574
>gi|410056652|ref|XP_003954539.1| PREDICTED: LOW QUALITY PROTEIN: polyadenylate-binding protein
1-like 2-like, partial [Pan troglodytes]
Length = 100
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 52/97 (53%), Positives = 71/97 (73%), Gaps = 1/97 (1%)
Query: 122 IDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIV 181
IDNKA+Y+ FS FG+ILSCKVA D G KGYGFVHF+ +E+A ++I+ +NGM LN + +
Sbjct: 1 IDNKALYNIFSLFGNILSCKVACDAXG-PKGYGFVHFQKQESAERAIDVMNGMFLNYRKI 59
Query: 182 FVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDE 218
FVG+F KERE E G A+ T+ +K+F ED ++E
Sbjct: 60 FVGRFKSHKEREAERGAWARQSTSADVKDFEEDTDEE 96
Score = 44.3 bits (103), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 41/72 (56%)
Query: 216 NDEKLKEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYV 275
+++ L +F +G I S +V + +G+GFV ++ E AE+A+ NG ++ + ++V
Sbjct: 2 DNKALYNIFSLFGNILSCKVACDAXGPKGYGFVHFQKQESAERAIDVMNGMFLNYRKIFV 61
Query: 276 GRAQKKAERTQE 287
GR + ER E
Sbjct: 62 GRFKSHKEREAE 73
>gi|338718073|ref|XP_001495845.2| PREDICTED: BTB/POZ domain-containing protein 9 [Equus caballus]
Length = 544
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 49/81 (60%), Positives = 63/81 (77%), Gaps = 1/81 (1%)
Query: 1 MYTAQTVQLSEEGIIIPKHNVATRELSAKVVEGVSRSLSSLIDGNTVKYDWDSGYTCHQL 60
M+T +T L E+G+I+P NVAT A V+EGVSRS ++L++G+T YDWDSGYTCHQL
Sbjct: 340 MFTNKTFTL-EKGLIVPMENVATIADCASVIEGVSRSRNALLNGDTKNYDWDSGYTCHQL 398
Query: 61 GSGAILVQLGQPYMLDTERAL 81
GSGAI+VQL QPYM+ + R L
Sbjct: 399 GSGAIMVQLAQPYMIGSIRLL 419
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 51/81 (62%), Gaps = 5/81 (6%)
Query: 4 AQTVQLSEEGIIIPKHNVATRELSAKVVEGVSRSLSSLIDGNTVKYDWDSGYTCHQLGSG 63
++ + L+ G++IP+ N+AT + A+VV+G + S+L+DG+T YD D G++ H +
Sbjct: 192 SRDMDLNYRGMLIPEENIATMKYGAQVVKGELK--SALLDGDTQNYDLDHGFSRHPIDDD 249
Query: 64 A---ILVQLGQPYMLDTERAL 81
I ++LGQP +++ R L
Sbjct: 250 CRSGIEIKLGQPSIINHIRIL 270
>gi|167534320|ref|XP_001748838.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163772800|gb|EDQ86448.1| predicted protein [Monosiga brevicollis MX1]
Length = 514
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 124/240 (51%), Gaps = 9/240 (3%)
Query: 94 IRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGY 153
I + ++ P+ + G +F+KNL + +DNK ++DTF++ G+ S KV +G S+G+
Sbjct: 86 ISLSFTPSQPASSAASSGTLFVKNLAEDVDNKTIFDTFASIGAPSSAKVMTTAEGKSRGF 145
Query: 154 GFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGE 213
VH++ + A ++++++ G+++N K + + ++ + +L E+++ T VY+
Sbjct: 146 AIVHYDDPQLAQRALDELEGVVVNGKNIRLERY----QTGAQLKEESRKRT-VYLAGLPH 200
Query: 214 DFNDEKLKEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKIL 273
+ D++L ++ P+G++ S ++ D FV E + +AV+ NG + + +
Sbjct: 201 EVTDKQLIDLLSPFGSVISVKLYPKDKDRNPVAFVTMEDEQAVLRAVEKLNGGSFERQRI 260
Query: 274 YVGRAQKKAERTQELKRRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTIT 333
V + Q + TQ ++ + LYV+N+ + + D L + F FG ++
Sbjct: 261 TVAQLQARNPATQSSG----PTSARQVEETKDATLYVRNIYEDVQDSDLSEAFGVFGPVS 316
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 114/235 (48%), Gaps = 20/235 (8%)
Query: 63 GAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPSLRK-SGVGNVFIKNLDKS 121
G +V P + +RALD + + G+ IR+ Q L++ S V++ L
Sbjct: 144 GFAIVHYDDPQL--AQRALDELEGVVVNGKNIRLERYQTGAQLKEESRKRTVYLAGLPHE 201
Query: 122 IDNKAMYDTFSAFGSILSCKV-AQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKI 180
+ +K + D S FGS++S K+ +D+ N FV E E+A +++EK+NG +
Sbjct: 202 VTDKQLIDLLSPFGSVISVKLYPKDKDRNP--VAFVTMEDEQAVLRAVEKLNGGSFERQR 259
Query: 181 VFVGKFIPRKEREKELG-------EKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTITSY 233
+ V + R + G E+ K T +Y++N ED D L E F +G ++
Sbjct: 260 ITVAQLQARNPATQSSGPTSARQVEETKDAT-LYVRNIYEDVQDSDLSEAFGVFGPVSRV 318
Query: 234 RVMNN-DGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQE 287
+ + +G +RGF FV +E+PE A+ A N EV G G+ Q A RT+E
Sbjct: 319 TIPRSANGDTRGFAFVVFENPEDRAHALAAGNMLEVGG-----GKVQYSAYRTKE 368
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 109/227 (48%), Gaps = 25/227 (11%)
Query: 115 IKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSK-GYGFVHFETEEAANKSIEKVNG 173
I +L ++ + + F A G S + +D N G+G+V+FE ++A ++I+ ++G
Sbjct: 15 IDHLPETATESQLAELFGAIGDFKSIHIIRDSISNKPLGHGYVNFEDVDSAIEAIKVLDG 74
Query: 174 MLL---NSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGTI 230
M L N F P + A +++KN ED +++ + + F G
Sbjct: 75 MDLTGGNDDKGISLSFTPSQPA-----SSAASSGTLFVKNLAEDVDNKTIFDTFASIGAP 129
Query: 231 TSYRVMNN-DGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELK 289
+S +VM +GKSRGF V Y+ P+ A++A+ G V+GK + + R Q A+ +E +
Sbjct: 130 SSAKVMTTAEGKSRGFAIVHYDDPQLAQRALDELEGVVVNGKNIRLERYQTGAQLKEESR 189
Query: 290 RRFEMLKIERLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+R +Y+ L + D++L +PFG++ S K
Sbjct: 190 KR---------------TVYLAGLPHEVTDKQLIDLLSPFGSVISVK 221
>gi|380023366|ref|XP_003695494.1| PREDICTED: BTB/POZ domain-containing protein 9 [Apis florea]
Length = 617
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 66/182 (36%), Positives = 95/182 (52%), Gaps = 24/182 (13%)
Query: 2 YTAQTVQLSEEGIIIPKHNVATRELSAKVVEGVSRSLSSLIDGNTVKYDWDSGYTCHQLG 61
YT T +L G +IP NVAT + SA V EGV RS ++L++G+T YDWDSGYTCHQ+G
Sbjct: 411 YTNHTEKL-HNGFVIPTRNVATMDQSATVTEGVCRSRNALLNGDTSNYDWDSGYTCHQVG 469
Query: 62 SGAILVQLGQPYMLDTERALDTMNFDALKGRPIRIMWSQRDPS----LRKSGVGNVFIKN 117
SG+ILVQLGQPY++D+ R L +W D S + SG ++
Sbjct: 470 SGSILVQLGQPYIIDSIRLL---------------LWDCDDRSYSYYIEVSGNSWSWVLV 514
Query: 118 LDKSIDNKAMYDT--FSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGML 175
DK+ + + T F ++ ++ ++ + VHFE N I VN +
Sbjct: 515 ADKTREACRSWQTIHFEPARPVVFIRIVGTHNTANEVFHCVHFECPAQVNDKI--VNKSM 572
Query: 176 LN 177
+N
Sbjct: 573 VN 574
>gi|355733309|gb|AES10987.1| polyadenylate-binding protein 1-like 2-like protein [Mustela
putorius furo]
Length = 97
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 51/94 (54%), Positives = 71/94 (75%), Gaps = 1/94 (1%)
Query: 125 KAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVG 184
KA+Y+ FSAFG+ILSCKVA DE+G KGYGFVHF+ +E+A ++I+ +NGM LN + +FVG
Sbjct: 1 KALYNIFSAFGNILSCKVACDEKG-PKGYGFVHFQKQESAERAIDAMNGMFLNYRKIFVG 59
Query: 185 KFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDE 218
+F KERE E G A+ T+ +K+F ED ++E
Sbjct: 60 RFKSHKEREAERGAWARQSTSADVKDFEEDTDEE 93
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 40/68 (58%)
Query: 220 LKEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQ 279
L +F +G I S +V ++ +G+GFV ++ E AE+A+ A NG ++ + ++VGR +
Sbjct: 3 LYNIFSAFGNILSCKVACDEKGPKGYGFVHFQKQESAERAIDAMNGMFLNYRKIFVGRFK 62
Query: 280 KKAERTQE 287
ER E
Sbjct: 63 SHKEREAE 70
>gi|345324952|ref|XP_001507726.2| PREDICTED: BTB/POZ domain-containing protein 9 [Ornithorhynchus
anatinus]
Length = 577
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 58/119 (48%), Positives = 79/119 (66%), Gaps = 9/119 (7%)
Query: 1 MYTAQTVQLSEEGIIIPKHNVATRELSAKVVEGVSRSLSSLIDGNTVKYDWDSGYTCHQL 60
M+T +T L E+G+++P NVAT A V+EGVSRS ++L++G+T YDWDSGYTCHQL
Sbjct: 449 MFTNKTFTL-EKGLMVPTENVATIADCASVIEGVSRSRNALLNGDTKNYDWDSGYTCHQL 507
Query: 61 GSGAILVQLGQPYMLDTERALDTMNFD----ALKGRPIRIMWSQRDPSLRKSG-VGNVF 114
GSGAI+VQL QPYM+ + R L++M +GR +R WS+ L G +G F
Sbjct: 508 GSGAIVVQLAQPYMIGSIR-LESMFLHPRGICHRGRAVR--WSEIRVPLELGGELGCTF 563
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 52/81 (64%), Gaps = 5/81 (6%)
Query: 4 AQTVQLSEEGIIIPKHNVATRELSAKVVEGVSRSLSSLIDGNTVKYDWDSGYTCHQLGSG 63
++ ++L+ G++IP+ N+AT + A+VV+G + S+L+DG+T YD D G++ H +
Sbjct: 301 SRDMELNYRGMLIPEENIATMKYGAQVVKGELK--SALLDGDTQNYDLDHGFSRHPIDDD 358
Query: 64 A---ILVQLGQPYMLDTERAL 81
I ++LGQP +++ R L
Sbjct: 359 CRSGIEIKLGQPSIVNHIRIL 379
>gi|403372966|gb|EJY86395.1| Polyadenylate-binding protein [Oxytricha trifallax]
Length = 592
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 79/239 (33%), Positives = 119/239 (49%), Gaps = 30/239 (12%)
Query: 113 VFIKNLDKSIDNKAMYDTFS-AFG--SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIE 169
+ +KNLDKSI ++ + + F+ FG ++LS KV+ + +S G+G V F + A +++
Sbjct: 105 LLVKNLDKSITSQQLDEIFAKVFGEDAVLSAKVSVNADYSSNGHGQVIFACPQLAEQALA 164
Query: 170 KVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGT 229
K + + P+ RE K F N+YIKNF ++N E+++++F YGT
Sbjct: 165 KAGEFNFQ-----ISPYQPKDRRELR-----KSFNNIYIKNFPSNWNKEQIEQIFGKYGT 214
Query: 230 ITSYRVM----NNDGKSRGFGFVAYESPE-------FAEKAVQAWNGKEVDGKILYVGRA 278
I S +M + F FV YE PE A+ A+ N +E DG LYV A
Sbjct: 215 IKSTVIMMGIVQGTDEEAPFAFVCYEDPENKEYGPKCAQNAITLENDQEYDGFKLYVKAA 274
Query: 279 QKKAERTQELKRRFEMLKIERLNRY-QGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
R QE K ++ R Y +G NLYVKN D +E+L+ F +G I S K
Sbjct: 275 LPMTLREQEKK-----IEQNRFKNYKKGCNLYVKNFPDDTTEEQLQAYFENYGEIESIK 328
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 93/199 (46%), Gaps = 24/199 (12%)
Query: 105 LRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKV------AQDEQGNSKGYGFVHF 158
LRKS N++IKN + + + + F +G+I S + DE+ + FV +
Sbjct: 184 LRKS-FNNIYIKNFPSNWNKEQIEQIFGKYGTIKSTVIMMGIVQGTDEEA---PFAFVCY 239
Query: 159 ETEE-------AANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLF------TN 205
E E A +I N + ++V +P RE+E + F N
Sbjct: 240 EDPENKEYGPKCAQNAITLENDQEYDGFKLYVKAALPMTLREQEKKIEQNRFKNYKKGCN 299
Query: 206 VYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNG 265
+Y+KNF +D +E+L+ FE YG I S ++ + DGK+ + FV Y+ PE A A Q
Sbjct: 300 LYVKNFPDDTTEEQLQAYFENYGEIESIKLNHKDGKAV-YAFVCYKDPESAAFAKQQSQT 358
Query: 266 KEVDGKILYVGRAQKKAER 284
+ GK L++ ++K R
Sbjct: 359 ETFHGKQLFINFYEQKEVR 377
>gi|449283242|gb|EMC89923.1| BTB/POZ domain-containing protein 9 [Columba livia]
Length = 647
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 49/81 (60%), Positives = 63/81 (77%), Gaps = 1/81 (1%)
Query: 1 MYTAQTVQLSEEGIIIPKHNVATRELSAKVVEGVSRSLSSLIDGNTVKYDWDSGYTCHQL 60
M+T +T L E+G+I+P NVAT A V+EGVSRS ++L++G+T YDWDSGYTCHQL
Sbjct: 444 MFTNKTFTL-EKGLIVPTENVATIADCASVIEGVSRSRNALLNGDTKNYDWDSGYTCHQL 502
Query: 61 GSGAILVQLGQPYMLDTERAL 81
GSGAI+VQL QPYM+ + R L
Sbjct: 503 GSGAIVVQLAQPYMIGSIRLL 523
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 48/78 (61%), Gaps = 5/78 (6%)
Query: 7 VQLSEEGIIIPKHNVATRELSAKVVEGVSRSLSSLIDGNTVKYDWDSGYTCHQLGSGA-- 64
+ L+ G++IP N+AT + A+VV+G + S+L+DG+T YD D G++ H +
Sbjct: 299 MDLNYRGMLIPGENIATMKYGAQVVKGELK--SALLDGDTQNYDLDHGFSRHPIDDDCRS 356
Query: 65 -ILVQLGQPYMLDTERAL 81
I ++LGQP +++ R L
Sbjct: 357 GIEIKLGQPSIINHIRIL 374
>gi|403353256|gb|EJY76164.1| Polyadenylate-binding protein [Oxytricha trifallax]
Length = 680
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 79/239 (33%), Positives = 119/239 (49%), Gaps = 30/239 (12%)
Query: 113 VFIKNLDKSIDNKAMYDTFS-AFG--SILSCKVAQDEQGNSKGYGFVHFETEEAANKSIE 169
+ +KNLDKSI ++ + + F+ FG ++LS KV+ + +S G+G V F + A +++
Sbjct: 105 LLVKNLDKSITSQQLDEIFAKVFGEDAVLSAKVSVNADYSSNGHGQVIFACPQLAEQALA 164
Query: 170 KVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLFTNVYIKNFGEDFNDEKLKEMFEPYGT 229
K + + P+ RE K F N+YIKNF ++N E+++++F YGT
Sbjct: 165 KAGEFNFQ-----ISPYQPKDRRELR-----KSFNNIYIKNFPSNWNKEQIEQIFGKYGT 214
Query: 230 ITSYRVM----NNDGKSRGFGFVAYESPE-------FAEKAVQAWNGKEVDGKILYVGRA 278
I S +M + F FV YE PE A+ A+ N +E DG LYV A
Sbjct: 215 IKSTVIMMGIVQGTDEEAPFAFVCYEDPENKEYGPKCAQNAITLENDQEYDGFKLYVKAA 274
Query: 279 QKKAERTQELKRRFEMLKIERLNRY-QGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
R QE K ++ R Y +G NLYVKN D +E+L+ F +G I S K
Sbjct: 275 LPMTLREQEKK-----IEQNRFKNYKKGCNLYVKNFPDDTTEEQLQAYFENYGEIESIK 328
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 93/199 (46%), Gaps = 24/199 (12%)
Query: 105 LRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKV------AQDEQGNSKGYGFVHF 158
LRKS N++IKN + + + + F +G+I S + DE+ + FV +
Sbjct: 184 LRKS-FNNIYIKNFPSNWNKEQIEQIFGKYGTIKSTVIMMGIVQGTDEEA---PFAFVCY 239
Query: 159 ETEE-------AANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEKAKLF------TN 205
E E A +I N + ++V +P RE+E + F N
Sbjct: 240 EDPENKEYGPKCAQNAITLENDQEYDGFKLYVKAALPMTLREQEKKIEQNRFKNYKKGCN 299
Query: 206 VYIKNFGEDFNDEKLKEMFEPYGTITSYRVMNNDGKSRGFGFVAYESPEFAEKAVQAWNG 265
+Y+KNF +D +E+L+ FE YG I S ++ + DGK+ + FV Y+ PE A A Q
Sbjct: 300 LYVKNFPDDTTEEQLQAYFENYGEIESIKLNHKDGKAV-YAFVCYKDPESAAFAKQQSQT 358
Query: 266 KEVDGKILYVGRAQKKAER 284
+ GK L++ ++K R
Sbjct: 359 ETFHGKQLFISFYEQKEVR 377
>gi|327262304|ref|XP_003215965.1| PREDICTED: BTB/POZ domain-containing protein 9-like [Anolis
carolinensis]
Length = 601
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 49/81 (60%), Positives = 63/81 (77%), Gaps = 1/81 (1%)
Query: 1 MYTAQTVQLSEEGIIIPKHNVATRELSAKVVEGVSRSLSSLIDGNTVKYDWDSGYTCHQL 60
M+T +T L E+G+I+P NVAT A V+EGVSRS ++L++G+T YDWDSGYTCHQL
Sbjct: 408 MFTNKTFTL-EKGLIVPTENVATVADCASVIEGVSRSRNALLNGDTKNYDWDSGYTCHQL 466
Query: 61 GSGAILVQLGQPYMLDTERAL 81
GSGAI+VQL QPYM+ + R L
Sbjct: 467 GSGAIVVQLAQPYMIGSIRLL 487
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 50/81 (61%), Gaps = 5/81 (6%)
Query: 4 AQTVQLSEEGIIIPKHNVATRELSAKVVEGVSRSLSSLIDGNTVKYDWDSGYTCHQLGSG 63
++ + L+ G++IP N+AT + A+VV+G + S+L+DG+T YD D G++ H +
Sbjct: 260 SRDMDLNYRGMLIPGENIATMKYGAQVVKGELK--SALLDGDTQNYDLDHGFSRHPIDDD 317
Query: 64 A---ILVQLGQPYMLDTERAL 81
I ++LGQP +++ R L
Sbjct: 318 CRSGIEIKLGQPSIINHIRIL 338
>gi|395737199|ref|XP_003776878.1| PREDICTED: LOW QUALITY PROTEIN: BTB/POZ domain-containing protein 9
[Pongo abelii]
Length = 652
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 49/81 (60%), Positives = 63/81 (77%), Gaps = 1/81 (1%)
Query: 1 MYTAQTVQLSEEGIIIPKHNVATRELSAKVVEGVSRSLSSLIDGNTVKYDWDSGYTCHQL 60
M+T +T L E+G+I+P NVAT A V+EGVSRS ++L++G+T YDWDSGYTCHQL
Sbjct: 448 MFTNKTFTL-EKGLIVPMENVATIADCASVIEGVSRSRNALLNGDTKNYDWDSGYTCHQL 506
Query: 61 GSGAILVQLGQPYMLDTERAL 81
GSGAI+VQL QPYM+ + R L
Sbjct: 507 GSGAIVVQLAQPYMIGSIRLL 527
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 51/81 (62%), Gaps = 5/81 (6%)
Query: 4 AQTVQLSEEGIIIPKHNVATRELSAKVVEGVSRSLSSLIDGNTVKYDWDSGYTCHQLGSG 63
++ + L+ G++IP+ N+AT + A+VV+G + S+L+DG+T YD D G++ H +
Sbjct: 300 SRDMDLNYRGMLIPEENIATMKYGAQVVKGELK--SALLDGDTQNYDLDHGFSRHPIDDD 357
Query: 64 A---ILVQLGQPYMLDTERAL 81
I ++LGQP +++ R L
Sbjct: 358 CRSGIEIKLGQPSIINHIRIL 378
>gi|297290755|ref|XP_001117064.2| PREDICTED: BTB/POZ domain-containing protein 9 isoform 1 [Macaca
mulatta]
Length = 544
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 49/81 (60%), Positives = 63/81 (77%), Gaps = 1/81 (1%)
Query: 1 MYTAQTVQLSEEGIIIPKHNVATRELSAKVVEGVSRSLSSLIDGNTVKYDWDSGYTCHQL 60
M+T +T L E+G+I+P NVAT A V+EGVSRS ++L++G+T YDWDSGYTCHQL
Sbjct: 340 MFTNKTFTL-EKGLIVPMENVATIADCASVIEGVSRSRNALLNGDTKNYDWDSGYTCHQL 398
Query: 61 GSGAILVQLGQPYMLDTERAL 81
GSGAI+VQL QPYM+ + R L
Sbjct: 399 GSGAIVVQLAQPYMIGSIRLL 419
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 51/81 (62%), Gaps = 5/81 (6%)
Query: 4 AQTVQLSEEGIIIPKHNVATRELSAKVVEGVSRSLSSLIDGNTVKYDWDSGYTCHQLGSG 63
++ + L+ G++IP+ N+AT + A+VV+G + S+L+DG+T YD D G++ H +
Sbjct: 192 SRDMDLNYRGMLIPEENIATMKYGAQVVKGELK--SALLDGDTQNYDLDHGFSRHPIDDD 249
Query: 64 A---ILVQLGQPYMLDTERAL 81
I ++LGQP +++ R L
Sbjct: 250 CRSGIEIKLGQPSIINHVRIL 270
>gi|332255689|ref|XP_003276965.1| PREDICTED: BTB/POZ domain-containing protein 9 isoform 1 [Nomascus
leucogenys]
Length = 544
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 49/81 (60%), Positives = 63/81 (77%), Gaps = 1/81 (1%)
Query: 1 MYTAQTVQLSEEGIIIPKHNVATRELSAKVVEGVSRSLSSLIDGNTVKYDWDSGYTCHQL 60
M+T +T L E+G+I+P NVAT A V+EGVSRS ++L++G+T YDWDSGYTCHQL
Sbjct: 340 MFTNKTFTL-EKGLIVPMENVATIADCASVIEGVSRSRNALLNGDTKNYDWDSGYTCHQL 398
Query: 61 GSGAILVQLGQPYMLDTERAL 81
GSGAI+VQL QPYM+ + R L
Sbjct: 399 GSGAIVVQLAQPYMIGSIRLL 419
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 51/81 (62%), Gaps = 5/81 (6%)
Query: 4 AQTVQLSEEGIIIPKHNVATRELSAKVVEGVSRSLSSLIDGNTVKYDWDSGYTCHQLGSG 63
++ + L+ G++IP+ N+AT + A+VV+G + S+L+DG+T YD D G++ H +
Sbjct: 192 SRDMDLNYRGMLIPEENIATMKYGAQVVKGELK--SALLDGDTQNYDLDHGFSRHPIDDD 249
Query: 64 A---ILVQLGQPYMLDTERAL 81
I ++LGQP +++ R L
Sbjct: 250 CRSGIEIKLGQPSIINHVRIL 270
>gi|326915328|ref|XP_003203971.1| PREDICTED: BTB/POZ domain-containing protein 9-like [Meleagris
gallopavo]
Length = 647
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 49/81 (60%), Positives = 63/81 (77%), Gaps = 1/81 (1%)
Query: 1 MYTAQTVQLSEEGIIIPKHNVATRELSAKVVEGVSRSLSSLIDGNTVKYDWDSGYTCHQL 60
M+T +T L E+G+I+P NVAT A V+EGVSRS ++L++G+T YDWDSGYTCHQL
Sbjct: 444 MFTNKTFAL-EKGLIVPAENVATIADCASVIEGVSRSRNALLNGDTKNYDWDSGYTCHQL 502
Query: 61 GSGAILVQLGQPYMLDTERAL 81
GSGAI+VQL QPYM+ + R L
Sbjct: 503 GSGAIVVQLAQPYMIGSIRLL 523
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 50/81 (61%), Gaps = 5/81 (6%)
Query: 4 AQTVQLSEEGIIIPKHNVATRELSAKVVEGVSRSLSSLIDGNTVKYDWDSGYTCHQLGSG 63
++ + L+ G++IP N+AT + A+VV+G + S+L+DG+T YD D G++ H +
Sbjct: 296 SRDMDLNYRGMLIPGENIATMKYGAQVVKGELK--SALLDGDTQNYDLDHGFSRHPIDDD 353
Query: 64 A---ILVQLGQPYMLDTERAL 81
I ++LGQP +++ R L
Sbjct: 354 CRSGIEIKLGQPSIINHIRIL 374
>gi|115468728|ref|NP_001057963.1| Os06g0589700 [Oryza sativa Japonica Group]
gi|113596003|dbj|BAF19877.1| Os06g0589700 [Oryza sativa Japonica Group]
Length = 399
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 52/98 (53%), Positives = 65/98 (66%)
Query: 239 DGKSRGFGFVAYESPEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRFEMLKIE 298
+G SR FGFV +E E A AV+ NGK + +LYV RAQKK+ER ELK +FE K +
Sbjct: 5 NGLSRCFGFVNFEKSECARNAVKNLNGKSIGDMVLYVARAQKKSERQAELKAKFEHDKNQ 64
Query: 299 RLNRYQGVNLYVKNLDDSIDDERLRKEFTPFGTITSAK 336
+ + Q VNLY+KNLDD I+DE LRK F FG + S K
Sbjct: 65 KFEKLQTVNLYLKNLDDDINDEHLRKLFECFGEVASCK 102
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/160 (37%), Positives = 93/160 (58%), Gaps = 11/160 (6%)
Query: 144 QDEQGNSKGYGFVHFETEEAANKSIEKVNGMLLNSKIVFVGKFIPRKEREKELGEK---- 199
+D G S+ +GFV+FE E A +++ +NG + +++V + + ER+ EL K
Sbjct: 2 RDANGLSRCFGFVNFEKSECARNAVKNLNGKSIGDMVLYVARAQKKSERQAELKAKFEHD 61
Query: 200 -----AKLFT-NVYIKNFGEDFNDEKLKEMFEPYGTITSYRVM-NNDGKSRGFGFVAYES 252
KL T N+Y+KN +D NDE L+++FE +G + S +VM ++ G+S+G GFV++ +
Sbjct: 62 KNQKFEKLQTVNLYLKNLDDDINDEHLRKLFECFGEVASCKVMLDSHGRSKGCGFVSFAT 121
Query: 253 PEFAEKAVQAWNGKEVDGKILYVGRAQKKAERTQELKRRF 292
E A A+ NGK V K LYV AQ+K ER L F
Sbjct: 122 VEDANNAILKMNGKMVGKKPLYVAVAQRKEERKAFLAAHF 161
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 50/83 (60%), Gaps = 1/83 (1%)
Query: 112 NVFIKNLDKSIDNKAMYDTFSAFGSILSCKVAQDEQGNSKGYGFVHFETEEAANKSIEKV 171
N+++KNLD I+++ + F FG + SCKV D G SKG GFV F T E AN +I K+
Sbjct: 73 NLYLKNLDDDINDEHLRKLFECFGEVASCKVMLDSHGRSKGCGFVSFATVEDANNAILKM 132
Query: 172 NGMLLNSKIVFVGKFIPRKEREK 194
NG ++ K ++V RKE K
Sbjct: 133 NGKMVGKKPLYVA-VAQRKEERK 154
>gi|16553241|dbj|BAB71514.1| unnamed protein product [Homo sapiens]
Length = 544
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 49/81 (60%), Positives = 63/81 (77%), Gaps = 1/81 (1%)
Query: 1 MYTAQTVQLSEEGIIIPKHNVATRELSAKVVEGVSRSLSSLIDGNTVKYDWDSGYTCHQL 60
M+T +T L E+G+I+P NVAT A V+EGVSRS ++L++G+T YDWDSGYTCHQL
Sbjct: 340 MFTNKTFTL-EKGLIVPMENVATIADCASVIEGVSRSRNALLNGDTKNYDWDSGYTCHQL 398
Query: 61 GSGAILVQLGQPYMLDTERAL 81
GSGAI+VQL QPYM+ + R L
Sbjct: 399 GSGAIVVQLAQPYMIGSIRLL 419
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 51/81 (62%), Gaps = 5/81 (6%)
Query: 4 AQTVQLSEEGIIIPKHNVATRELSAKVVEGVSRSLSSLIDGNTVKYDWDSGYTCHQLGSG 63
++ + L+ G++IP+ N+AT + A+VV+G + S+L+DG+T YD D G++ H +
Sbjct: 192 SRDMDLNYRGMLIPEENIATMKYGAQVVKGELK--SALLDGDTQNYDLDHGFSRHPIDDD 249
Query: 64 A---ILVQLGQPYMLDTERAL 81
I ++LGQP +++ R L
Sbjct: 250 CRSGIEIKLGQPSVINHIRIL 270
>gi|15620819|dbj|BAB67773.1| KIAA1880 protein [Homo sapiens]
Length = 642
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 49/81 (60%), Positives = 63/81 (77%), Gaps = 1/81 (1%)
Query: 1 MYTAQTVQLSEEGIIIPKHNVATRELSAKVVEGVSRSLSSLIDGNTVKYDWDSGYTCHQL 60
M+T +T L E+G+I+P NVAT A V+EGVSRS ++L++G+T YDWDSGYTCHQL
Sbjct: 438 MFTNKTFTL-EKGLIVPMENVATIADCASVIEGVSRSRNALLNGDTKNYDWDSGYTCHQL 496
Query: 61 GSGAILVQLGQPYMLDTERAL 81
GSGAI+VQL QPYM+ + R L
Sbjct: 497 GSGAIVVQLAQPYMIGSIRLL 517
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 51/81 (62%), Gaps = 5/81 (6%)
Query: 4 AQTVQLSEEGIIIPKHNVATRELSAKVVEGVSRSLSSLIDGNTVKYDWDSGYTCHQLGSG 63
++ + L+ G++IP+ N+AT + A+VV+G + S+L+DG+T YD D G++ H +
Sbjct: 290 SRDMDLNYRGMLIPEENIATMKYGAQVVKGELK--SALLDGDTQNYDLDHGFSRHPIDDD 347
Query: 64 A---ILVQLGQPYMLDTERAL 81
I ++LGQP +++ R L
Sbjct: 348 CRSGIEIKLGQPSIINHIRIL 368
>gi|345778723|ref|XP_538898.3| PREDICTED: BTB/POZ domain-containing protein 9 [Canis lupus
familiaris]
Length = 543
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 49/81 (60%), Positives = 63/81 (77%), Gaps = 1/81 (1%)
Query: 1 MYTAQTVQLSEEGIIIPKHNVATRELSAKVVEGVSRSLSSLIDGNTVKYDWDSGYTCHQL 60
M+T +T L E+G+I+P NVAT A V+EGVSRS ++L++G+T YDWDSGYTCHQL
Sbjct: 340 MFTNKTFTL-EKGLIVPMENVATIADCASVIEGVSRSRNALLNGDTKNYDWDSGYTCHQL 398
Query: 61 GSGAILVQLGQPYMLDTERAL 81
GSGAI+VQL QPYM+ + R L
Sbjct: 399 GSGAIVVQLAQPYMIGSIRLL 419
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 51/81 (62%), Gaps = 5/81 (6%)
Query: 4 AQTVQLSEEGIIIPKHNVATRELSAKVVEGVSRSLSSLIDGNTVKYDWDSGYTCHQLGSG 63
++ + L+ G++IP+ N+AT + A+VV+G + S+L+DG+T YD D G++ H +
Sbjct: 192 SRDMDLNYRGMLIPEENIATMKYGAQVVKGELK--SALLDGDTQNYDLDHGFSRHPIDDD 249
Query: 64 A---ILVQLGQPYMLDTERAL 81
I ++LGQP +++ R L
Sbjct: 250 CRSGIEIKLGQPSIINHIRIL 270
>gi|151108435|ref|NP_689946.2| BTB/POZ domain-containing protein 9 isoform b [Homo sapiens]
gi|332823958|ref|XP_518445.3| PREDICTED: BTB/POZ domain-containing protein 9 isoform 2 [Pan
troglodytes]
gi|397496197|ref|XP_003818929.1| PREDICTED: BTB/POZ domain-containing protein 9 isoform 1 [Pan
paniscus]
gi|426353017|ref|XP_004043998.1| PREDICTED: BTB/POZ domain-containing protein 9 isoform 1 [Gorilla
gorilla gorilla]
gi|71682120|gb|AAI01356.1| BTB (POZ) domain containing 9 [Homo sapiens]
gi|72533368|gb|AAI01355.1| BTB (POZ) domain containing 9 [Homo sapiens]
gi|119624366|gb|EAX03961.1| BTB (POZ) domain containing 9, isoform CRA_c [Homo sapiens]
Length = 544
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 49/81 (60%), Positives = 63/81 (77%), Gaps = 1/81 (1%)
Query: 1 MYTAQTVQLSEEGIIIPKHNVATRELSAKVVEGVSRSLSSLIDGNTVKYDWDSGYTCHQL 60
M+T +T L E+G+I+P NVAT A V+EGVSRS ++L++G+T YDWDSGYTCHQL
Sbjct: 340 MFTNKTFTL-EKGLIVPMENVATIADCASVIEGVSRSRNALLNGDTKNYDWDSGYTCHQL 398
Query: 61 GSGAILVQLGQPYMLDTERAL 81
GSGAI+VQL QPYM+ + R L
Sbjct: 399 GSGAIVVQLAQPYMIGSIRLL 419
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 51/81 (62%), Gaps = 5/81 (6%)
Query: 4 AQTVQLSEEGIIIPKHNVATRELSAKVVEGVSRSLSSLIDGNTVKYDWDSGYTCHQLGSG 63
++ + L+ G++IP+ N+AT + A+VV+G + S+L+DG+T YD D G++ H +
Sbjct: 192 SRDMDLNYRGMLIPEENIATMKYGAQVVKGELK--SALLDGDTQNYDLDHGFSRHPIDDD 249
Query: 64 A---ILVQLGQPYMLDTERAL 81
I ++LGQP +++ R L
Sbjct: 250 CRSGIEIKLGQPSIINHIRIL 270
>gi|56605918|ref|NP_001008459.1| BTB/POZ domain-containing protein 9 [Gallus gallus]
gi|53131787|emb|CAG31847.1| hypothetical protein RCJMB04_12d16 [Gallus gallus]
Length = 647
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 49/81 (60%), Positives = 63/81 (77%), Gaps = 1/81 (1%)
Query: 1 MYTAQTVQLSEEGIIIPKHNVATRELSAKVVEGVSRSLSSLIDGNTVKYDWDSGYTCHQL 60
M+T +T L E+G+I+P NVAT A V+EGVSRS ++L++G+T YDWDSGYTCHQL
Sbjct: 444 MFTNKTFAL-EKGLIVPTENVATIADCASVIEGVSRSRNALLNGDTKNYDWDSGYTCHQL 502
Query: 61 GSGAILVQLGQPYMLDTERAL 81
GSGAI+VQL QPYM+ + R L
Sbjct: 503 GSGAIVVQLAQPYMIGSIRLL 523
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 50/81 (61%), Gaps = 5/81 (6%)
Query: 4 AQTVQLSEEGIIIPKHNVATRELSAKVVEGVSRSLSSLIDGNTVKYDWDSGYTCHQLGSG 63
++ + L+ G++IP N+AT + A+VV+G + S+L+DG+T YD D G++ H +
Sbjct: 296 SRDMDLNYRGMLIPGENIATMKYGAQVVKGELK--SALLDGDTQNYDLDHGFSRHPIDDD 353
Query: 64 A---ILVQLGQPYMLDTERAL 81
I ++LGQP +++ R L
Sbjct: 354 CRSGIEIKLGQPSIINHIRIL 374
>gi|344242190|gb|EGV98293.1| Polyadenylate-binding protein 1-like [Cricetulus griseus]
Length = 63
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 46/60 (76%), Positives = 53/60 (88%)
Query: 84 MNFDALKGRPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKAMYDTFSAFGSILSCKVA 143
MNF+ +KG+PIRIMWS RDP LRKSG+GN+FIKNL+ SIDNKA+YDTFS FGSILS KV
Sbjct: 1 MNFEMIKGQPIRIMWSHRDPGLRKSGMGNIFIKNLENSIDNKALYDTFSTFGSILSSKVG 60
>gi|426250233|ref|XP_004018842.1| PREDICTED: BTB/POZ domain-containing protein 9 isoform 2 [Ovis
aries]
Length = 543
Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 49/81 (60%), Positives = 63/81 (77%), Gaps = 1/81 (1%)
Query: 1 MYTAQTVQLSEEGIIIPKHNVATRELSAKVVEGVSRSLSSLIDGNTVKYDWDSGYTCHQL 60
M+T +T L E+G+I+P NVAT A V+EGVSRS ++L++G+T YDWDSGYTCHQL
Sbjct: 340 MFTNKTFTL-EKGLIVPMENVATIADCASVIEGVSRSRNALLNGDTKNYDWDSGYTCHQL 398
Query: 61 GSGAILVQLGQPYMLDTERAL 81
GSGAI+VQL QPYM+ + R L
Sbjct: 399 GSGAIVVQLAQPYMIGSIRLL 419
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 51/81 (62%), Gaps = 5/81 (6%)
Query: 4 AQTVQLSEEGIIIPKHNVATRELSAKVVEGVSRSLSSLIDGNTVKYDWDSGYTCHQLGSG 63
++ + L+ G++IP+ N+AT + A+VV+G + S+L+DG+T YD D G++ H +
Sbjct: 192 SRDMDLNYRGMLIPEENIATMKYGAQVVKGELK--SALLDGDTQNYDLDHGFSRHPIDDD 249
Query: 64 A---ILVQLGQPYMLDTERAL 81
I ++LGQP +++ R L
Sbjct: 250 CRSGIEIKLGQPSIINHIRIL 270
>gi|151108411|ref|NP_443125.1| BTB/POZ domain-containing protein 9 isoform a [Homo sapiens]
gi|151108413|ref|NP_001092742.1| BTB/POZ domain-containing protein 9 isoform a [Homo sapiens]
gi|34395545|sp|Q96Q07.2|BTBD9_HUMAN RecName: Full=BTB/POZ domain-containing protein 9
gi|119624365|gb|EAX03960.1| BTB (POZ) domain containing 9, isoform CRA_b [Homo sapiens]
gi|168278977|dbj|BAG11368.1| BTB/POZ domain-containing protein 9 [synthetic construct]
gi|410223670|gb|JAA09054.1| BTB (POZ) domain containing 9 [Pan troglodytes]
gi|410264194|gb|JAA20063.1| BTB (POZ) domain containing 9 [Pan troglodytes]
gi|410288094|gb|JAA22647.1| BTB (POZ) domain containing 9 [Pan troglodytes]
gi|410351765|gb|JAA42486.1| BTB (POZ) domain containing 9 [Pan troglodytes]
gi|410351767|gb|JAA42487.1| BTB (POZ) domain containing 9 [Pan troglodytes]
Length = 612
Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 49/81 (60%), Positives = 63/81 (77%), Gaps = 1/81 (1%)
Query: 1 MYTAQTVQLSEEGIIIPKHNVATRELSAKVVEGVSRSLSSLIDGNTVKYDWDSGYTCHQL 60
M+T +T L E+G+I+P NVAT A V+EGVSRS ++L++G+T YDWDSGYTCHQL
Sbjct: 408 MFTNKTFTL-EKGLIVPMENVATIADCASVIEGVSRSRNALLNGDTKNYDWDSGYTCHQL 466
Query: 61 GSGAILVQLGQPYMLDTERAL 81
GSGAI+VQL QPYM+ + R L
Sbjct: 467 GSGAIVVQLAQPYMIGSIRLL 487
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 51/81 (62%), Gaps = 5/81 (6%)
Query: 4 AQTVQLSEEGIIIPKHNVATRELSAKVVEGVSRSLSSLIDGNTVKYDWDSGYTCHQLGSG 63
++ + L+ G++IP+ N+AT + A+VV+G + S+L+DG+T YD D G++ H +
Sbjct: 260 SRDMDLNYRGMLIPEENIATMKYGAQVVKGELK--SALLDGDTQNYDLDHGFSRHPIDDD 317
Query: 64 A---ILVQLGQPYMLDTERAL 81
I ++LGQP +++ R L
Sbjct: 318 CRSGIEIKLGQPSIINHIRIL 338
>gi|410959060|ref|XP_003986130.1| PREDICTED: BTB/POZ domain-containing protein 9 isoform 2 [Felis
catus]
Length = 544
Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 49/81 (60%), Positives = 63/81 (77%), Gaps = 1/81 (1%)
Query: 1 MYTAQTVQLSEEGIIIPKHNVATRELSAKVVEGVSRSLSSLIDGNTVKYDWDSGYTCHQL 60
M+T +T L E+G+I+P NVAT A V+EGVSRS ++L++G+T YDWDSGYTCHQL
Sbjct: 340 MFTNKTFTL-EKGLIVPMENVATIADCASVIEGVSRSRNALLNGDTKNYDWDSGYTCHQL 398
Query: 61 GSGAILVQLGQPYMLDTERAL 81
GSGAI+VQL QPYM+ + R L
Sbjct: 399 GSGAIVVQLAQPYMIGSIRLL 419
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 51/81 (62%), Gaps = 5/81 (6%)
Query: 4 AQTVQLSEEGIIIPKHNVATRELSAKVVEGVSRSLSSLIDGNTVKYDWDSGYTCHQLGSG 63
++ + L+ G++IP+ N+AT + A+VV+G + S+L+DG+T YD D G++ H +
Sbjct: 192 SRDMDLNYRGMLIPEENIATMKYGAQVVKGELK--SALLDGDTQNYDLDHGFSRHPIDDD 249
Query: 64 A---ILVQLGQPYMLDTERAL 81
I ++LGQP +++ R L
Sbjct: 250 CRSGIEIKLGQPSIINHIRIL 270
>gi|380784001|gb|AFE63876.1| BTB/POZ domain-containing protein 9 isoform a [Macaca mulatta]
gi|383413311|gb|AFH29869.1| BTB/POZ domain-containing protein 9 isoform a [Macaca mulatta]
gi|384942100|gb|AFI34655.1| BTB/POZ domain-containing protein 9 isoform a [Macaca mulatta]
Length = 612
Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 49/81 (60%), Positives = 63/81 (77%), Gaps = 1/81 (1%)
Query: 1 MYTAQTVQLSEEGIIIPKHNVATRELSAKVVEGVSRSLSSLIDGNTVKYDWDSGYTCHQL 60
M+T +T L E+G+I+P NVAT A V+EGVSRS ++L++G+T YDWDSGYTCHQL
Sbjct: 408 MFTNKTFTL-EKGLIVPMENVATIADCASVIEGVSRSRNALLNGDTKNYDWDSGYTCHQL 466
Query: 61 GSGAILVQLGQPYMLDTERAL 81
GSGAI+VQL QPYM+ + R L
Sbjct: 467 GSGAIVVQLAQPYMIGSIRLL 487
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 51/81 (62%), Gaps = 5/81 (6%)
Query: 4 AQTVQLSEEGIIIPKHNVATRELSAKVVEGVSRSLSSLIDGNTVKYDWDSGYTCHQLGSG 63
++ + L+ G++IP+ N+AT + A+VV+G + S+L+DG+T YD D G++ H +
Sbjct: 260 SRDMDLNYRGMLIPEENIATMKYGAQVVKGELK--SALLDGDTQNYDLDHGFSRHPIDDD 317
Query: 64 A---ILVQLGQPYMLDTERAL 81
I ++LGQP +++ R L
Sbjct: 318 CRSGIEIKLGQPSIINHVRIL 338
>gi|291396148|ref|XP_002714705.1| PREDICTED: BTB (POZ) domain containing 9 [Oryctolagus cuniculus]
Length = 656
Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 49/81 (60%), Positives = 63/81 (77%), Gaps = 1/81 (1%)
Query: 1 MYTAQTVQLSEEGIIIPKHNVATRELSAKVVEGVSRSLSSLIDGNTVKYDWDSGYTCHQL 60
M+T +T L E+G+I+P NVAT A V+EGVSRS ++L++G+T YDWDSGYTCHQL
Sbjct: 453 MFTNKTFTL-EKGLIVPMENVATIADCASVIEGVSRSRNALLNGDTKNYDWDSGYTCHQL 511
Query: 61 GSGAILVQLGQPYMLDTERAL 81
GSGAI+VQL QPYM+ + R L
Sbjct: 512 GSGAIVVQLAQPYMIGSIRLL 532
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 51/81 (62%), Gaps = 5/81 (6%)
Query: 4 AQTVQLSEEGIIIPKHNVATRELSAKVVEGVSRSLSSLIDGNTVKYDWDSGYTCHQLGSG 63
++ + L+ G++IP+ N+AT + A+VV+G + S+L+DG+T YD D G++ H +
Sbjct: 305 SRDMDLNYRGMLIPEENIATMKYGAQVVKGELK--SALLDGDTQNYDLDHGFSRHPIDDD 362
Query: 64 A---ILVQLGQPYMLDTERAL 81
I ++LGQP +++ R L
Sbjct: 363 CRSGIEIKLGQPSIINHIRIL 383
>gi|426250231|ref|XP_004018841.1| PREDICTED: BTB/POZ domain-containing protein 9 isoform 1 [Ovis
aries]
Length = 611
Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 49/81 (60%), Positives = 63/81 (77%), Gaps = 1/81 (1%)
Query: 1 MYTAQTVQLSEEGIIIPKHNVATRELSAKVVEGVSRSLSSLIDGNTVKYDWDSGYTCHQL 60
M+T +T L E+G+I+P NVAT A V+EGVSRS ++L++G+T YDWDSGYTCHQL
Sbjct: 408 MFTNKTFTL-EKGLIVPMENVATIADCASVIEGVSRSRNALLNGDTKNYDWDSGYTCHQL 466
Query: 61 GSGAILVQLGQPYMLDTERAL 81
GSGAI+VQL QPYM+ + R L
Sbjct: 467 GSGAIVVQLAQPYMIGSIRLL 487
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 51/81 (62%), Gaps = 5/81 (6%)
Query: 4 AQTVQLSEEGIIIPKHNVATRELSAKVVEGVSRSLSSLIDGNTVKYDWDSGYTCHQLGSG 63
++ + L+ G++IP+ N+AT + A+VV+G + S+L+DG+T YD D G++ H +
Sbjct: 260 SRDMDLNYRGMLIPEENIATMKYGAQVVKGELK--SALLDGDTQNYDLDHGFSRHPIDDD 317
Query: 64 A---ILVQLGQPYMLDTERAL 81
I ++LGQP +++ R L
Sbjct: 318 CRSGIEIKLGQPSIINHIRIL 338
>gi|119624364|gb|EAX03959.1| BTB (POZ) domain containing 9, isoform CRA_a [Homo sapiens]
Length = 666
Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 49/81 (60%), Positives = 63/81 (77%), Gaps = 1/81 (1%)
Query: 1 MYTAQTVQLSEEGIIIPKHNVATRELSAKVVEGVSRSLSSLIDGNTVKYDWDSGYTCHQL 60
M+T +T L E+G+I+P NVAT A V+EGVSRS ++L++G+T YDWDSGYTCHQL
Sbjct: 462 MFTNKTFTL-EKGLIVPMENVATIADCASVIEGVSRSRNALLNGDTKNYDWDSGYTCHQL 520
Query: 61 GSGAILVQLGQPYMLDTERAL 81
GSGAI+VQL QPYM+ + R L
Sbjct: 521 GSGAIVVQLAQPYMIGSIRLL 541
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 51/81 (62%), Gaps = 5/81 (6%)
Query: 4 AQTVQLSEEGIIIPKHNVATRELSAKVVEGVSRSLSSLIDGNTVKYDWDSGYTCHQLGSG 63
++ + L+ G++IP+ N+AT + A+VV+G + S+L+DG+T YD D G++ H +
Sbjct: 314 SRDMDLNYRGMLIPEENIATMKYGAQVVKGELK--SALLDGDTQNYDLDHGFSRHPIDDD 371
Query: 64 A---ILVQLGQPYMLDTERAL 81
I ++LGQP +++ R L
Sbjct: 372 CRSGIEIKLGQPSIINHIRIL 392
>gi|21749187|dbj|BAC03550.1| unnamed protein product [Homo sapiens]
Length = 258
Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 49/81 (60%), Positives = 63/81 (77%), Gaps = 1/81 (1%)
Query: 1 MYTAQTVQLSEEGIIIPKHNVATRELSAKVVEGVSRSLSSLIDGNTVKYDWDSGYTCHQL 60
M+T +T L E+G+I+P NVAT A V+EGVSRS ++L++G+T YDWDSGYTCHQL
Sbjct: 54 MFTNKTFTL-EKGLIVPMENVATIADCASVIEGVSRSRNALLNGDTKNYDWDSGYTCHQL 112
Query: 61 GSGAILVQLGQPYMLDTERAL 81
GSGAI+VQL QPYM+ + R L
Sbjct: 113 GSGAIVVQLAQPYMIGSIRLL 133
>gi|343183315|ref|NP_001230232.1| BTB (POZ) domain containing 9 [Sus scrofa]
Length = 612
Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 49/81 (60%), Positives = 63/81 (77%), Gaps = 1/81 (1%)
Query: 1 MYTAQTVQLSEEGIIIPKHNVATRELSAKVVEGVSRSLSSLIDGNTVKYDWDSGYTCHQL 60
M+T +T L E+G+I+P NVAT A V+EGVSRS ++L++G+T YDWDSGYTCHQL
Sbjct: 408 MFTNKTFTL-EKGLIVPMENVATIADCASVIEGVSRSRNALLNGDTKNYDWDSGYTCHQL 466
Query: 61 GSGAILVQLGQPYMLDTERAL 81
GSGAI+VQL QPYM+ + R L
Sbjct: 467 GSGAIVVQLAQPYMIGSIRLL 487
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 51/81 (62%), Gaps = 5/81 (6%)
Query: 4 AQTVQLSEEGIIIPKHNVATRELSAKVVEGVSRSLSSLIDGNTVKYDWDSGYTCHQLGSG 63
++ + L+ G++IP+ N+AT + A+VV+G + S+L+DG+T YD D G++ H +
Sbjct: 260 SRDMDLNYRGMLIPEENIATMKYGAQVVKGELK--SALLDGDTQNYDLDHGFSRHPIDDD 317
Query: 64 A---ILVQLGQPYMLDTERAL 81
I ++LGQP +++ R L
Sbjct: 318 CRSGIEIKLGQPSIINHIRIL 338
>gi|297290757|ref|XP_002803769.1| PREDICTED: BTB/POZ domain-containing protein 9 isoform 2 [Macaca
mulatta]
Length = 582
Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 49/81 (60%), Positives = 63/81 (77%), Gaps = 1/81 (1%)
Query: 1 MYTAQTVQLSEEGIIIPKHNVATRELSAKVVEGVSRSLSSLIDGNTVKYDWDSGYTCHQL 60
M+T +T L E+G+I+P NVAT A V+EGVSRS ++L++G+T YDWDSGYTCHQL
Sbjct: 378 MFTNKTFTL-EKGLIVPMENVATIADCASVIEGVSRSRNALLNGDTKNYDWDSGYTCHQL 436
Query: 61 GSGAILVQLGQPYMLDTERAL 81
GSGAI+VQL QPYM+ + R L
Sbjct: 437 GSGAIVVQLAQPYMIGSIRLL 457
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 51/81 (62%), Gaps = 5/81 (6%)
Query: 4 AQTVQLSEEGIIIPKHNVATRELSAKVVEGVSRSLSSLIDGNTVKYDWDSGYTCHQLGSG 63
++ + L+ G++IP+ N+AT + A+VV+G + S+L+DG+T YD D G++ H +
Sbjct: 201 SRDMDLNYRGMLIPEENIATMKYGAQVVKGELK--SALLDGDTQNYDLDHGFSRHPIDDD 258
Query: 64 A---ILVQLGQPYMLDTERAL 81
I ++LGQP +++ R L
Sbjct: 259 CRSGIEIKLGQPSIINHVRIL 279
>gi|260830659|ref|XP_002610278.1| hypothetical protein BRAFLDRAFT_93002 [Branchiostoma floridae]
gi|229295642|gb|EEN66288.1| hypothetical protein BRAFLDRAFT_93002 [Branchiostoma floridae]
Length = 600
Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 47/81 (58%), Positives = 64/81 (79%), Gaps = 1/81 (1%)
Query: 1 MYTAQTVQLSEEGIIIPKHNVATRELSAKVVEGVSRSLSSLIDGNTVKYDWDSGYTCHQL 60
+YT + QL E G+++P NVAT + SA V+EGVSRS ++L++G+T YDWDSGYTCHQL
Sbjct: 411 LYTNKPFQL-ERGLLVPSENVATTQHSASVIEGVSRSRNALLNGDTKNYDWDSGYTCHQL 469
Query: 61 GSGAILVQLGQPYMLDTERAL 81
GSGAI+VQL QP+++ + R L
Sbjct: 470 GSGAIVVQLAQPFIVGSMRLL 490
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 50/80 (62%), Gaps = 4/80 (5%)
Query: 4 AQTVQLSEEGIIIPKHNVATRELSAKVVEGVSRSLSSLIDGNTVKYDWDSGYTCHQL--G 61
++ + L+ G + P+ N+AT A V++G ++ +L+DG+ YD D G+T H +
Sbjct: 264 SRDMDLNYRGFLTPEENIATLRHGASVIKGEMKA--ALLDGDCTNYDLDRGFTRHPIEEN 321
Query: 62 SGAILVQLGQPYMLDTERAL 81
+G ++V+LGQP +++T R L
Sbjct: 322 NGGVVVKLGQPSIINTIRLL 341
>gi|355674115|gb|AER95242.1| BTB domain containing 9 [Mustela putorius furo]
Length = 620
Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 49/81 (60%), Positives = 63/81 (77%), Gaps = 1/81 (1%)
Query: 1 MYTAQTVQLSEEGIIIPKHNVATRELSAKVVEGVSRSLSSLIDGNTVKYDWDSGYTCHQL 60
M+T +T L E+G+I+P NVAT A V+EGVSRS ++L++G+T YDWDSGYTCHQL
Sbjct: 417 MFTNKTFTL-EKGLIVPMENVATIADCASVIEGVSRSRNALLNGDTKNYDWDSGYTCHQL 475
Query: 61 GSGAILVQLGQPYMLDTERAL 81
GSGAI+VQL QPYM+ + R L
Sbjct: 476 GSGAIVVQLAQPYMIGSIRLL 496
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 51/81 (62%), Gaps = 5/81 (6%)
Query: 4 AQTVQLSEEGIIIPKHNVATRELSAKVVEGVSRSLSSLIDGNTVKYDWDSGYTCHQLGSG 63
++ + L+ G++IP+ N+AT + A+VV+G + S+L+DG+T YD D G++ H +
Sbjct: 269 SRDMDLNYRGMLIPEENIATMKYGAQVVKGELK--SALLDGDTQNYDLDHGFSRHPIDDD 326
Query: 64 A---ILVQLGQPYMLDTERAL 81
I ++LGQP +++ R L
Sbjct: 327 CRSGIEIKLGQPSIINHIRIL 347
>gi|417414380|gb|JAA53485.1| Hypothetical protein, partial [Desmodus rotundus]
Length = 578
Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 49/81 (60%), Positives = 63/81 (77%), Gaps = 1/81 (1%)
Query: 1 MYTAQTVQLSEEGIIIPKHNVATRELSAKVVEGVSRSLSSLIDGNTVKYDWDSGYTCHQL 60
M+T +T L E+G+I+P NVAT A V+EGVSRS ++L++G+T YDWDSGYTCHQL
Sbjct: 408 MFTNKTFTL-EKGLIVPMENVATIADCASVIEGVSRSRNALLNGDTKNYDWDSGYTCHQL 466
Query: 61 GSGAILVQLGQPYMLDTERAL 81
GSGAI+VQL QPYM+ + R L
Sbjct: 467 GSGAIVVQLAQPYMIGSIRLL 487
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 51/81 (62%), Gaps = 5/81 (6%)
Query: 4 AQTVQLSEEGIIIPKHNVATRELSAKVVEGVSRSLSSLIDGNTVKYDWDSGYTCHQLGSG 63
++ + L+ G++IP+ N+AT + A+VV+G + S+L+DG+T YD D G++ H +
Sbjct: 260 SRDMDLNYRGMLIPEENIATMKYGAQVVKGELK--SALLDGDTQNYDLDHGFSRHPIDDD 317
Query: 64 A---ILVQLGQPYMLDTERAL 81
I ++LGQP +++ R L
Sbjct: 318 CRSGIEIKLGQPSIINHIRIL 338
>gi|355561661|gb|EHH18293.1| hypothetical protein EGK_14861 [Macaca mulatta]
gi|355748525|gb|EHH53008.1| hypothetical protein EGM_13561 [Macaca fascicularis]
Length = 612
Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 49/81 (60%), Positives = 63/81 (77%), Gaps = 1/81 (1%)
Query: 1 MYTAQTVQLSEEGIIIPKHNVATRELSAKVVEGVSRSLSSLIDGNTVKYDWDSGYTCHQL 60
M+T +T L E+G+I+P NVAT A V+EGVSRS ++L++G+T YDWDSGYTCHQL
Sbjct: 408 MFTNKTFTL-EKGLIVPMENVATIADCASVIEGVSRSRNALLNGDTKNYDWDSGYTCHQL 466
Query: 61 GSGAILVQLGQPYMLDTERAL 81
GSGAI+VQL QPYM+ + R L
Sbjct: 467 GSGAIVVQLAQPYMIGSIRLL 487
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 51/81 (62%), Gaps = 5/81 (6%)
Query: 4 AQTVQLSEEGIIIPKHNVATRELSAKVVEGVSRSLSSLIDGNTVKYDWDSGYTCHQLGSG 63
++ + L+ G++IP+ N+AT + A+VV+G + S+L+DG+T YD D G++ H +
Sbjct: 260 SRDMDLNYRGMLIPEENIATMKYGAQVVKGELK--SALLDGDTQNYDLDHGFSRHPIDDD 317
Query: 64 A---ILVQLGQPYMLDTERAL 81
I ++LGQP +++ R L
Sbjct: 318 CRSGIEIKLGQPSIINHVRIL 338
>gi|426250235|ref|XP_004018843.1| PREDICTED: BTB/POZ domain-containing protein 9 isoform 3 [Ovis
aries]
Length = 580
Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 49/81 (60%), Positives = 63/81 (77%), Gaps = 1/81 (1%)
Query: 1 MYTAQTVQLSEEGIIIPKHNVATRELSAKVVEGVSRSLSSLIDGNTVKYDWDSGYTCHQL 60
M+T +T L E+G+I+P NVAT A V+EGVSRS ++L++G+T YDWDSGYTCHQL
Sbjct: 377 MFTNKTFTL-EKGLIVPMENVATIADCASVIEGVSRSRNALLNGDTKNYDWDSGYTCHQL 435
Query: 61 GSGAILVQLGQPYMLDTERAL 81
GSGAI+VQL QPYM+ + R L
Sbjct: 436 GSGAIVVQLAQPYMIGSIRLL 456
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 51/81 (62%), Gaps = 5/81 (6%)
Query: 4 AQTVQLSEEGIIIPKHNVATRELSAKVVEGVSRSLSSLIDGNTVKYDWDSGYTCHQLGSG 63
++ + L+ G++IP+ N+AT + A+VV+G + S+L+DG+T YD D G++ H +
Sbjct: 201 SRDMDLNYRGMLIPEENIATMKYGAQVVKGELK--SALLDGDTQNYDLDHGFSRHPIDDD 258
Query: 64 A---ILVQLGQPYMLDTERAL 81
I ++LGQP +++ R L
Sbjct: 259 CRSGIEIKLGQPSIINHIRIL 279
>gi|288915529|ref|NP_001165889.1| BTB/POZ domain-containing protein 9 isoform c [Homo sapiens]
gi|332823960|ref|XP_003311323.1| PREDICTED: BTB/POZ domain-containing protein 9 isoform 1 [Pan
troglodytes]
gi|397496199|ref|XP_003818930.1| PREDICTED: BTB/POZ domain-containing protein 9 isoform 2 [Pan
paniscus]
gi|426353019|ref|XP_004043999.1| PREDICTED: BTB/POZ domain-containing protein 9 isoform 2 [Gorilla
gorilla gorilla]
gi|71682123|gb|AAI01358.1| BTBD9 protein [Homo sapiens]
Length = 582
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/81 (60%), Positives = 63/81 (77%), Gaps = 1/81 (1%)
Query: 1 MYTAQTVQLSEEGIIIPKHNVATRELSAKVVEGVSRSLSSLIDGNTVKYDWDSGYTCHQL 60
M+T +T L E+G+I+P NVAT A V+EGVSRS ++L++G+T YDWDSGYTCHQL
Sbjct: 378 MFTNKTFTL-EKGLIVPMENVATIADCASVIEGVSRSRNALLNGDTKNYDWDSGYTCHQL 436
Query: 61 GSGAILVQLGQPYMLDTERAL 81
GSGAI+VQL QPYM+ + R L
Sbjct: 437 GSGAIVVQLAQPYMIGSIRLL 457
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 51/81 (62%), Gaps = 5/81 (6%)
Query: 4 AQTVQLSEEGIIIPKHNVATRELSAKVVEGVSRSLSSLIDGNTVKYDWDSGYTCHQLGSG 63
++ + L+ G++IP+ N+AT + A+VV+G + S+L+DG+T YD D G++ H +
Sbjct: 201 SRDMDLNYRGMLIPEENIATMKYGAQVVKGELK--SALLDGDTQNYDLDHGFSRHPIDDD 258
Query: 64 A---ILVQLGQPYMLDTERAL 81
I ++LGQP +++ R L
Sbjct: 259 CRSGIEIKLGQPSIINHIRIL 279
>gi|296474492|tpg|DAA16607.1| TPA: BTB (POZ) domain containing 9 [Bos taurus]
Length = 521
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/81 (60%), Positives = 63/81 (77%), Gaps = 1/81 (1%)
Query: 1 MYTAQTVQLSEEGIIIPKHNVATRELSAKVVEGVSRSLSSLIDGNTVKYDWDSGYTCHQL 60
M+T +T L E+G+I+P NVAT A V+EGVSRS ++L++G+T YDWDSGYTCHQL
Sbjct: 408 MFTNKTFTL-EKGLIVPMENVATIADCASVIEGVSRSRNALLNGDTKNYDWDSGYTCHQL 466
Query: 61 GSGAILVQLGQPYMLDTERAL 81
GSGAI+VQL QPYM+ + R L
Sbjct: 467 GSGAIVVQLAQPYMIGSIRLL 487
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 51/81 (62%), Gaps = 5/81 (6%)
Query: 4 AQTVQLSEEGIIIPKHNVATRELSAKVVEGVSRSLSSLIDGNTVKYDWDSGYTCHQLGSG 63
++ + L+ G++IP+ N+AT + A+VV+G + S+L+DG+T YD D G++ H +
Sbjct: 260 SRDMDLNYRGMLIPEENIATMKYGAQVVKGELK--SALLDGDTQNYDLDHGFSRHPIDDD 317
Query: 64 A---ILVQLGQPYMLDTERAL 81
I ++LGQP +++ R L
Sbjct: 318 CRSGIEIKLGQPSIINHIRIL 338
>gi|410959058|ref|XP_003986129.1| PREDICTED: BTB/POZ domain-containing protein 9 isoform 1 [Felis
catus]
Length = 612
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/81 (60%), Positives = 63/81 (77%), Gaps = 1/81 (1%)
Query: 1 MYTAQTVQLSEEGIIIPKHNVATRELSAKVVEGVSRSLSSLIDGNTVKYDWDSGYTCHQL 60
M+T +T L E+G+I+P NVAT A V+EGVSRS ++L++G+T YDWDSGYTCHQL
Sbjct: 408 MFTNKTFTL-EKGLIVPMENVATIADCASVIEGVSRSRNALLNGDTKNYDWDSGYTCHQL 466
Query: 61 GSGAILVQLGQPYMLDTERAL 81
GSGAI+VQL QPYM+ + R L
Sbjct: 467 GSGAIVVQLAQPYMIGSIRLL 487
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 51/81 (62%), Gaps = 5/81 (6%)
Query: 4 AQTVQLSEEGIIIPKHNVATRELSAKVVEGVSRSLSSLIDGNTVKYDWDSGYTCHQLGSG 63
++ + L+ G++IP+ N+AT + A+VV+G + S+L+DG+T YD D G++ H +
Sbjct: 260 SRDMDLNYRGMLIPEENIATMKYGAQVVKGELK--SALLDGDTQNYDLDHGFSRHPIDDD 317
Query: 64 A---ILVQLGQPYMLDTERAL 81
I ++LGQP +++ R L
Sbjct: 318 CRSGIEIKLGQPSIINHIRIL 338
>gi|332255693|ref|XP_003276967.1| PREDICTED: BTB/POZ domain-containing protein 9 isoform 3 [Nomascus
leucogenys]
Length = 585
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/81 (60%), Positives = 63/81 (77%), Gaps = 1/81 (1%)
Query: 1 MYTAQTVQLSEEGIIIPKHNVATRELSAKVVEGVSRSLSSLIDGNTVKYDWDSGYTCHQL 60
M+T +T L E+G+I+P NVAT A V+EGVSRS ++L++G+T YDWDSGYTCHQL
Sbjct: 381 MFTNKTFTL-EKGLIVPMENVATIADCASVIEGVSRSRNALLNGDTKNYDWDSGYTCHQL 439
Query: 61 GSGAILVQLGQPYMLDTERAL 81
GSGAI+VQL QPYM+ + R L
Sbjct: 440 GSGAIVVQLAQPYMIGSIRLL 460
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 51/81 (62%), Gaps = 5/81 (6%)
Query: 4 AQTVQLSEEGIIIPKHNVATRELSAKVVEGVSRSLSSLIDGNTVKYDWDSGYTCHQLGSG 63
++ + L+ G++IP+ N+AT + A+VV+G + S+L+DG+T YD D G++ H +
Sbjct: 201 SRDMDLNYRGMLIPEENIATMKYGAQVVKGELK--SALLDGDTQNYDLDHGFSRHPIDDD 258
Query: 64 A---ILVQLGQPYMLDTERAL 81
I ++LGQP +++ R L
Sbjct: 259 CRSGIEIKLGQPSIINHVRIL 279
>gi|301782813|ref|XP_002926823.1| PREDICTED: BTB/POZ domain-containing protein 9-like [Ailuropoda
melanoleuca]
Length = 779
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/81 (60%), Positives = 63/81 (77%), Gaps = 1/81 (1%)
Query: 1 MYTAQTVQLSEEGIIIPKHNVATRELSAKVVEGVSRSLSSLIDGNTVKYDWDSGYTCHQL 60
M+T +T L E+G+I+P NVAT A V+EGVSRS ++L++G+T YDWDSGYTCHQL
Sbjct: 575 MFTNKTFTL-EKGLIVPMENVATIADCASVIEGVSRSRNALLNGDTKNYDWDSGYTCHQL 633
Query: 61 GSGAILVQLGQPYMLDTERAL 81
GSGAI+VQL QPYM+ + R L
Sbjct: 634 GSGAIVVQLAQPYMIGSIRLL 654
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 51/81 (62%), Gaps = 5/81 (6%)
Query: 4 AQTVQLSEEGIIIPKHNVATRELSAKVVEGVSRSLSSLIDGNTVKYDWDSGYTCHQL--- 60
++ + L+ G++IP+ N+AT + A+VV+G + S+L+DG+T YD D G++ H +
Sbjct: 427 SRDMDLNYRGMLIPEENIATMKYGAQVVKGELK--SALLDGDTQNYDLDHGFSRHPIDDD 484
Query: 61 GSGAILVQLGQPYMLDTERAL 81
I ++LGQP +++ R L
Sbjct: 485 CRSGIEIKLGQPSIINHIRIL 505
>gi|405967659|gb|EKC32795.1| BTB/POZ domain-containing protein 9 [Crassostrea gigas]
Length = 644
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 45/71 (63%), Positives = 58/71 (81%)
Query: 11 EEGIIIPKHNVATRELSAKVVEGVSRSLSSLIDGNTVKYDWDSGYTCHQLGSGAILVQLG 70
E+G+++P NVAT A V+EGVSRS ++LI+G+T YDWDSGYTCHQLGSGAI+VQL
Sbjct: 432 EQGLVVPSENVATIGAGACVIEGVSRSRNALINGDTRHYDWDSGYTCHQLGSGAIIVQLA 491
Query: 71 QPYMLDTERAL 81
QPY++D+ R L
Sbjct: 492 QPYIIDSMRLL 502
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 52/82 (63%), Gaps = 7/82 (8%)
Query: 4 AQTVQLSEEGIIIPKHNVATRELSAKVVEGVSRSLSSLIDGNTVKYDWDSGYTCHQL--- 60
++ ++L+ G +IP+ NVAT+ A+V+ G + +SL+DG++ YD D G+T H +
Sbjct: 275 SRDMELNYRGSLIPETNVATQRYGAQVIRGEMK--NSLLDGDSQNYDLDRGFTRHPIDDN 332
Query: 61 -GSGAILVQLGQPYMLDTERAL 81
G G ++V+L PY+++ + L
Sbjct: 333 FGQG-VVVKLASPYIINCIKLL 353
>gi|410959062|ref|XP_003986131.1| PREDICTED: BTB/POZ domain-containing protein 9 isoform 3 [Felis
catus]
Length = 582
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/81 (60%), Positives = 63/81 (77%), Gaps = 1/81 (1%)
Query: 1 MYTAQTVQLSEEGIIIPKHNVATRELSAKVVEGVSRSLSSLIDGNTVKYDWDSGYTCHQL 60
M+T +T L E+G+I+P NVAT A V+EGVSRS ++L++G+T YDWDSGYTCHQL
Sbjct: 378 MFTNKTFTL-EKGLIVPMENVATIADCASVIEGVSRSRNALLNGDTKNYDWDSGYTCHQL 436
Query: 61 GSGAILVQLGQPYMLDTERAL 81
GSGAI+VQL QPYM+ + R L
Sbjct: 437 GSGAIVVQLAQPYMIGSIRLL 457
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 51/81 (62%), Gaps = 5/81 (6%)
Query: 4 AQTVQLSEEGIIIPKHNVATRELSAKVVEGVSRSLSSLIDGNTVKYDWDSGYTCHQLGSG 63
++ + L+ G++IP+ N+AT + A+VV+G + S+L+DG+T YD D G++ H +
Sbjct: 201 SRDMDLNYRGMLIPEENIATMKYGAQVVKGELK--SALLDGDTQNYDLDHGFSRHPIDDD 258
Query: 64 A---ILVQLGQPYMLDTERAL 81
I ++LGQP +++ R L
Sbjct: 259 CRSGIEIKLGQPSIINHIRIL 279
>gi|395534076|ref|XP_003769074.1| PREDICTED: BTB/POZ domain-containing protein 9, partial
[Sarcophilus harrisii]
Length = 968
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/81 (60%), Positives = 63/81 (77%), Gaps = 1/81 (1%)
Query: 1 MYTAQTVQLSEEGIIIPKHNVATRELSAKVVEGVSRSLSSLIDGNTVKYDWDSGYTCHQL 60
M+T +T L E+G+I+P NVAT A V+EGVSRS ++L++G+T YDWDSGYTCHQL
Sbjct: 467 MFTNKTFTL-EKGLIVPTDNVATIADCASVIEGVSRSRNALLNGDTKNYDWDSGYTCHQL 525
Query: 61 GSGAILVQLGQPYMLDTERAL 81
GSGAI+VQL QPYM+ + R L
Sbjct: 526 GSGAIVVQLAQPYMIGSIRLL 546
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 49/78 (62%), Gaps = 5/78 (6%)
Query: 7 VQLSEEGIIIPKHNVATRELSAKVVEGVSRSLSSLIDGNTVKYDWDSGYTCHQLGSGA-- 64
+ L+ G++IP+ N+AT + A+VV+G + S+L+DG+T YD D G++ H +
Sbjct: 322 MDLNYRGMLIPEENIATMKYGAQVVKGELK--SALLDGDTQNYDLDHGFSRHPIDDDCRS 379
Query: 65 -ILVQLGQPYMLDTERAL 81
I ++LGQP +++ R L
Sbjct: 380 GIEIKLGQPSIINHIRIL 397
>gi|344256015|gb|EGW12119.1| BTB/POZ domain-containing protein 9 [Cricetulus griseus]
Length = 247
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/81 (60%), Positives = 63/81 (77%), Gaps = 1/81 (1%)
Query: 1 MYTAQTVQLSEEGIIIPKHNVATRELSAKVVEGVSRSLSSLIDGNTVKYDWDSGYTCHQL 60
M+T +T L E+G+I+P NVAT A V+EGVSRS ++L++G+T YDWDSGYTCHQL
Sbjct: 1 MFTNKTFTL-EKGLIVPMENVATIADCASVIEGVSRSRNALLNGDTKNYDWDSGYTCHQL 59
Query: 61 GSGAILVQLGQPYMLDTERAL 81
GSGAI+VQL QPYM+ + R L
Sbjct: 60 GSGAIVVQLAQPYMIGSIRLL 80
>gi|334323528|ref|XP_001379369.2| PREDICTED: BTB/POZ domain-containing protein 9 [Monodelphis
domestica]
Length = 663
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 49/81 (60%), Positives = 63/81 (77%), Gaps = 1/81 (1%)
Query: 1 MYTAQTVQLSEEGIIIPKHNVATRELSAKVVEGVSRSLSSLIDGNTVKYDWDSGYTCHQL 60
M+T +T L E+G+I+P NVAT A V+EGVSRS ++L++G+T YDWDSGYTCHQL
Sbjct: 408 MFTNKTFTL-EKGLIVPMDNVATIADCASVIEGVSRSRNALLNGDTKNYDWDSGYTCHQL 466
Query: 61 GSGAILVQLGQPYMLDTERAL 81
GSGAI+VQL QPYM+ + R L
Sbjct: 467 GSGAIVVQLAQPYMIGSIRLL 487
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 51/81 (62%), Gaps = 5/81 (6%)
Query: 4 AQTVQLSEEGIIIPKHNVATRELSAKVVEGVSRSLSSLIDGNTVKYDWDSGYTCHQLGSG 63
++ + L+ G++IP+ N+AT + A+VV+G + S+L+DG+T YD D G++ H +
Sbjct: 260 SRDMDLNYRGMLIPEENIATMKHGAQVVKGELK--SALLDGDTQNYDLDHGFSRHPIDDD 317
Query: 64 A---ILVQLGQPYMLDTERAL 81
I ++LGQP +++ R L
Sbjct: 318 CRSGIEIKLGQPSIINHIRIL 338
>gi|403261769|ref|XP_003923283.1| PREDICTED: BTB/POZ domain-containing protein 9 [Saimiri boliviensis
boliviensis]
Length = 544
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/81 (59%), Positives = 63/81 (77%), Gaps = 1/81 (1%)
Query: 1 MYTAQTVQLSEEGIIIPKHNVATRELSAKVVEGVSRSLSSLIDGNTVKYDWDSGYTCHQL 60
M+T +T L E+G+I+P N+AT A V+EGVSRS ++L++G+T YDWDSGYTCHQL
Sbjct: 340 MFTNKTFTL-EKGLIVPMENIATIADCASVIEGVSRSRNALLNGDTKNYDWDSGYTCHQL 398
Query: 61 GSGAILVQLGQPYMLDTERAL 81
GSGAI+VQL QPYM+ + R L
Sbjct: 399 GSGAIVVQLAQPYMIGSIRLL 419
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 51/81 (62%), Gaps = 5/81 (6%)
Query: 4 AQTVQLSEEGIIIPKHNVATRELSAKVVEGVSRSLSSLIDGNTVKYDWDSGYTCHQLGSG 63
++ + L+ G++IP+ N+AT + A+VV+G + S+L+DG+T YD D G++ H +
Sbjct: 192 SRDMDLNYRGMLIPEENIATMKYGAQVVKGELK--SALLDGDTQNYDLDHGFSRHPIDDD 249
Query: 64 A---ILVQLGQPYMLDTERAL 81
I ++LGQP +++ R L
Sbjct: 250 CRSGIEIKLGQPSIINHIRIL 270
>gi|291226013|ref|XP_002732994.1| PREDICTED: CG1826-like [Saccoglossus kowalevskii]
Length = 630
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/80 (60%), Positives = 62/80 (77%), Gaps = 1/80 (1%)
Query: 2 YTAQTVQLSEEGIIIPKHNVATRELSAKVVEGVSRSLSSLIDGNTVKYDWDSGYTCHQLG 61
YTA+ L E G+I+P NVAT SA V+EGVSRS ++L++G+T YDWDSGYTCHQLG
Sbjct: 411 YTARPFTL-ENGLIVPTENVATVHASACVIEGVSRSRNALLNGDTKNYDWDSGYTCHQLG 469
Query: 62 SGAILVQLGQPYMLDTERAL 81
SGAI+VQL QP+++ + R L
Sbjct: 470 SGAIIVQLAQPFVISSCRLL 489
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.316 0.134 0.381
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,127,751,351
Number of Sequences: 23463169
Number of extensions: 218026398
Number of successful extensions: 713478
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 7988
Number of HSP's successfully gapped in prelim test: 15390
Number of HSP's that attempted gapping in prelim test: 622878
Number of HSP's gapped (non-prelim): 66766
length of query: 336
length of database: 8,064,228,071
effective HSP length: 143
effective length of query: 193
effective length of database: 9,003,962,200
effective search space: 1737764704600
effective search space used: 1737764704600
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 77 (34.3 bits)