BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy12562
(599 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1SJJ|A Chain A, Cryo-Em Structure Of Chicken Gizzard Smooth Muscle Alpha-
Actinin
pdb|1SJJ|B Chain B, Cryo-Em Structure Of Chicken Gizzard Smooth Muscle Alpha-
Actinin
Length = 863
Score = 788 bits (2034), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 369/599 (61%), Positives = 464/599 (77%), Gaps = 5/599 (0%)
Query: 1 MPWLQSRQTDNSLSGVQKKLEEYRTYRRKHKPPRVEQKAKLETNFNTLQTKLRLSNRPAY 60
+PWL++R +N++ +Q+KLE++R YRR HKPP+V++K +LE NFNTLQTKLRLSNRPA+
Sbjct: 270 IPWLENRAPENTMQAMQQKLEDFRDYRRLHKPPKVQEKCQLEINFNTLQTKLRLSNRPAF 329
Query: 61 MPTEGKMVSDIANAWKGLETSEKSFXXXXXXXXXXXXXXXXXAQKFKHKADIHEDWTRGK 120
MP+EGKMVSDI NAW GLE +EK + A+KF+ KA IHE WT GK
Sbjct: 330 MPSEGKMVSDINNAWGGLEQAEKGYEEWLLNEIRRLERLDHLAEKFRQKASIHESWTDGK 389
Query: 121 EEMLQSSDFRQCKLNELKALKKKHEAFESDLAAHQDRVEQIAAIAQELNTLEYHDSVSVN 180
E MLQ D+ L+E+KAL KKHEAFESDLAAHQDRVEQIAAIAQELN L+Y+DS SVN
Sbjct: 390 EAMLQQKDYETATLSEIKALLKKHEAFESDLAAHQDRVEQIAAIAQELNELDYYDSPSVN 449
Query: 181 ARCQRICDQWDHLGALTQQRRHALDEAEKILEKIDILHLEFAKRAAPFNNWLDGTREDLV 240
ARCQ+ICDQWD+LGALTQ+RR AL+ EK+LE ID L+LE+AKRAAPFNNW++G EDL
Sbjct: 450 ARCQKICDQWDNLGALTQKRREALERTEKLLETIDQLYLEYAKRAAPFNNWMEGAMEDLQ 509
Query: 241 DMFIVHTMEEIQGLIDAHSQFKATLGEADKEYNSIVNLVREVESTVQQYQIPGGLENPYT 300
D FIVHT+EEIQGL AH QFKATL +ADKE +I+ + EV VQ Y + NPYT
Sbjct: 510 DTFIVHTIEEIQGLTTAHEQFKATLPDADKERQAILGIHNEVSKIVQTYHVNMAGTNPYT 569
Query: 301 ALTANDLTKKWTDVRKLVPQRDTTLQAELRKQQNNETLRRQFAEKANQVGPWIERQMDAV 360
+T ++ KW VR+LVP+RD L E +QQ NE LR+QF +AN +GPWI+ +M+ +
Sbjct: 570 TITPQEINGKWEHVRQLVPRRDQALMEEHARQQQNERLRKQFGAQANVIGPWIQTKMEEI 629
Query: 361 TSIGMGLQGSLEDQLHRLKEYEQGVYAYKPHIEELEKIHQAVQEGMIFENRYTQYTMETL 420
I + + G+LEDQL+ L++YE+ + YKP I++LE HQ +QE +IF+N++T YTME +
Sbjct: 630 GRISIEMHGTLEDQLNHLRQYEKSIVNYKPKIDQLEGDHQQIQEALIFDNKHTNYTMEHI 689
Query: 421 RVGWEQLLTSINRNINEVENQILTRDSKGITQEQLNEFRASFNHFDKNRTGRLAPEEFKS 480
RVGWEQLLT+I R INEVENQILTRD+KGI+QEQ+NEFRASFNHFD+ +TG + E+F++
Sbjct: 690 RVGWEQLLTTIARTINEVENQILTRDAKGISQEQMNEFRASFNHFDRKKTGMMDCEDFRA 749
Query: 481 CLVSLGYSIGKDRQGEIDFQRILAVVDPNSTGYVHFDAFLDFMTRESTDTDTAEQVIDSF 540
CL+S+GY++ GE +F RI+++VDPN G V F AF+DFM+RE+ DTDTA+QV+ SF
Sbjct: 750 CLISMGYNM-----GEAEFARIMSIVDPNRMGVVTFQAFIDFMSRETADTDTADQVMASF 804
Query: 541 RILAGDKPYILPDELRRELPPDQAEYCIQRMPPYKGPNAIPGALDYQSFSTALYGESDL 599
+ILAGDK YI DELRRELPPDQAEYCI RM PY G +A+PGALDY SFSTALYGESDL
Sbjct: 805 KILAGDKNYITVDELRRELPPDQAEYCIARMAPYNGRDAVPGALDYMSFSTALYGESDL 863
>pdb|1HCI|A Chain A, Crystal Structure Of The Rod Domain Of Alpha-Actinin
pdb|1HCI|B Chain B, Crystal Structure Of The Rod Domain Of Alpha-Actinin
Length = 476
Score = 549 bits (1415), Expect = e-156, Method: Compositional matrix adjust.
Identities = 259/446 (58%), Positives = 333/446 (74%)
Query: 1 MPWLQSRQTDNSLSGVQKKLEEYRTYRRKHKPPRVEQKAKLETNFNTLQTKLRLSNRPAY 60
+PWL++R + ++ +QKKLE++R YRRKHKPP+V++K +LE NFNTLQTKLR+SNRPA+
Sbjct: 31 IPWLENRTPEKTMQAMQKKLEDFRDYRRKHKPPKVQEKCQLEINFNTLQTKLRISNRPAF 90
Query: 61 MPTEGKMVSDIANAWKGLETSEKSFXXXXXXXXXXXXXXXXXAQKFKHKADIHEDWTRGK 120
MP+EGKMVSDIA AW+ LE +EK + A+KF+ KA HE W GK
Sbjct: 91 MPSEGKMVSDIAGAWQRLEQAEKGYEEWLLNEIRRLERLEHLAEKFRQKASTHETWAYGK 150
Query: 121 EEMLQSSDFRQCKLNELKALKKKHEAFESDLAAHQDRVEQIAAIAQELNTLEYHDSVSVN 180
E++L D+ L E++AL +KHEAFESDLAAHQDRVEQIAAIAQELN L+YHD+V+VN
Sbjct: 151 EQILLQKDYESASLTEVRALLRKHEAFESDLAAHQDRVEQIAAIAQELNELDYHDAVNVN 210
Query: 181 ARCQRICDQWDHLGALTQQRRHALDEAEKILEKIDILHLEFAKRAAPFNNWLDGTREDLV 240
RCQ+ICDQWD LG LTQ+RR AL+ EK+LE ID LHLEFAKRAAPFNNW++G EDL
Sbjct: 211 DRCQKICDQWDRLGTLTQKRREALERMEKLLETIDQLHLEFAKRAAPFNNWMEGAMEDLQ 270
Query: 241 DMFIVHTMEEIQGLIDAHSQFKATLGEADKEYNSIVNLVREVESTVQQYQIPGGLENPYT 300
DMFIVH++EEIQ LI AH QFKATL EAD E SI+ + EVE +Q Y I NPY+
Sbjct: 271 DMFIVHSIEEIQSLITAHEQFKATLPEADGERQSIMAIQNEVEKVIQSYNIRISSSNPYS 330
Query: 301 ALTANDLTKKWTDVRKLVPQRDTTLQAELRKQQNNETLRRQFAEKANQVGPWIERQMDAV 360
+T ++L KW V++LVP RD +LQ EL +Q NE LRRQFA +AN +GPWI+ +M+ +
Sbjct: 331 TVTMDELRTKWDKVKQLVPIRDQSLQEELARQHANERLRRQFAAQANAIGPWIQNKMEEI 390
Query: 361 TSIGMGLQGSLEDQLHRLKEYEQGVYAYKPHIEELEKIHQAVQEGMIFENRYTQYTMETL 420
+ + G+LEDQ+++LK+YE + YK +I++LE HQ +QE ++F+N++T YTME +
Sbjct: 391 ARSSIQITGALEDQMNQLKQYEHNIINYKNNIDKLEGDHQLIQEALVFDNKHTNYTMEHI 450
Query: 421 RVGWEQLLTSINRNINEVENQILTRD 446
RVGWE LLT+I R INEVE QILTRD
Sbjct: 451 RVGWELLLTTIARTINEVETQILTRD 476
>pdb|1QUU|A Chain A, Crystal Structure Of Two Central Spectrin-Like Repeats
From Alpha-Actinin
Length = 250
Score = 303 bits (777), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 146/234 (62%), Positives = 176/234 (75%)
Query: 103 AQKFKHKADIHEDWTRGKEEMLQSSDFRQCKLNELKALKKKHEAFESDLAAHQDRVEQIA 162
A+KF+ KA HE W GKE++L D+ L E++AL +KHEAFESDLAAHQDRVEQIA
Sbjct: 16 AEKFRQKASTHETWAYGKEQILLQKDYESASLTEVRALLRKHEAFESDLAAHQDRVEQIA 75
Query: 163 AIAQELNTLEYHDSVSVNARCQRICDQWDHLGALTQQRRHALDEAEKILEKIDILHLEFA 222
AIAQELN L+YHD+V+VN RCQ+ICDQWD LG LTQ+RR AL+ EK+LE ID LHLEFA
Sbjct: 76 AIAQELNELDYHDAVNVNDRCQKICDQWDRLGTLTQKRREALERMEKLLETIDQLHLEFA 135
Query: 223 KRAAPFNNWLDGTREDLVDMFIVHTMEEIQGLIDAHSQFKATLGEADKEYNSIVNLVREV 282
KRAAPFNNW++G EDL DMFIVH++EEIQ LI AH QFKATL EAD E SI+ + EV
Sbjct: 136 KRAAPFNNWMEGAMEDLQDMFIVHSIEEIQSLITAHEQFKATLPEADGERQSIMAIQNEV 195
Query: 283 ESTVQQYQIPGGLENPYTALTANDLTKKWTDVRKLVPQRDTTLQAELRKQQNNE 336
E +Q Y I NPY+ +T ++L KW V++LVP RD +LQ EL +Q NE
Sbjct: 196 EKVIQSYNIRISSSNPYSTVTMDELRTKWDKVKQLVPIRDQSLQEELARQHANE 249
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 48/233 (20%), Positives = 99/233 (42%), Gaps = 30/233 (12%)
Query: 211 LEKIDILHLEFAKRAAPFNNWLDGTREDLVDM-FIVHTMEEIQGLIDAHSQFKATLGEAD 269
LE+++ L +F ++A+ W G + L+ + ++ E++ L+ H F++ L
Sbjct: 9 LERLEHLAEKFRQKASTHETWAYGKEQILLQKDYESASLTEVRALLRKHEAFESDLAAHQ 68
Query: 270 KEYNSIVNLVREVESTVQQYQIPGGLENPYTALTANDLTKK----WTDVRKLVPQRDTTL 325
I + +E+ + + A+ ND +K W + L +R L
Sbjct: 69 DRVEQIAAIAQELNEL-----------DYHDAVNVNDRCQKICDQWDRLGTLTQKRREAL 117
Query: 326 QAELRKQQNNETLRRQFAEKANQVGPWIERQMDAVTSIGMGLQGSLEDQLHRLKEYEQGV 385
+ + + + L +FA++A W+E M+ + M + S+E+ + +EQ
Sbjct: 118 ERMEKLLETIDQLHLEFAKRAAPFNNWMEGAMEDLQ--DMFIVHSIEEIQSLITAHEQ-F 174
Query: 386 YAYKPHIE-----------ELEKIHQAVQEGMIFENRYTQYTMETLRVGWEQL 427
A P + E+EK+ Q+ + N Y+ TM+ LR W+++
Sbjct: 175 KATLPEADGERQSIMAIQNEVEKVIQSYNIRISSSNPYSTVTMDELRTKWDKV 227
>pdb|1WLX|A Chain A, Solution Structure Of The Third Spectrin Repeat Of Alpha-
Actinin-4
Length = 129
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 67/126 (53%), Positives = 86/126 (68%)
Query: 208 EKILEKIDILHLEFAKRAAPFNNWLDGTREDLVDMFIVHTMEEIQGLIDAHSQFKATLGE 267
EK LE ID LHLE+AKRAAPFNNW++ EDL DMFIVHT+EEI+GLI AH QFK+TL +
Sbjct: 4 EKQLEAIDQLHLEYAKRAAPFNNWMESAMEDLQDMFIVHTIEEIEGLISAHDQFKSTLPD 63
Query: 268 ADKEYNSIVNLVREVESTVQQYQIPGGLENPYTALTANDLTKKWTDVRKLVPQRDTTLQA 327
AD+E +I+ + +E + + I NPYT +T + KW V++LVP+RD L
Sbjct: 64 ADREREAILAIHKEAQRIAESNHIKLSGSNPYTTVTPQIINSKWEKVQQLVPKRDHALLE 123
Query: 328 ELRKQQ 333
E KQQ
Sbjct: 124 EQSKQQ 129
>pdb|1H8B|A Chain A, Ef-Hands 3,4 From Alpha-Actinin Z-Repeat 7 From Titin
Length = 75
Score = 128 bits (322), Expect = 7e-30, Method: Composition-based stats.
Identities = 57/71 (80%), Positives = 64/71 (90%)
Query: 529 DTDTAEQVIDSFRILAGDKPYILPDELRRELPPDQAEYCIQRMPPYKGPNAIPGALDYQS 588
DTDTAEQVI SFRILA DKPYIL +ELRRELPPDQA+YCI+RMP Y GP ++PGALDY +
Sbjct: 5 DTDTAEQVIASFRILASDKPYILAEELRRELPPDQAQYCIKRMPAYSGPGSVPGALDYAA 64
Query: 589 FSTALYGESDL 599
FS+ALYGESDL
Sbjct: 65 FSSALYGESDL 75
>pdb|3EK8|A Chain A, Calcium-Saturated Gcamp2 T116vG87R MUTANT MONOMER
Length = 449
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 63/114 (55%), Gaps = 8/114 (7%)
Query: 444 TRDSKGITQEQLNEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRIL 503
TRD +T+EQ+ EF+ +F+ FDK+ G + +E + + SLG + E + Q ++
Sbjct: 301 TRDQ--LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQN-----PTEAELQDMI 353
Query: 504 AVVDPNSTGYVHFDAFLDFMTRESTDTDTAEQVIDSFRILAGD-KPYILPDELR 556
VD + G + F FL M R+ DTD+ E++ ++FR+ D YI ELR
Sbjct: 354 NEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELR 407
Score = 30.8 bits (68), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 35/68 (51%), Gaps = 5/68 (7%)
Query: 457 EFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPNSTGYVHF 516
E R +F FDK+ G ++ E + + +LG + + E+D ++ D + G V++
Sbjct: 385 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE---EVD--EMIREADIDGDGQVNY 439
Query: 517 DAFLDFMT 524
+ F+ MT
Sbjct: 440 EEFVQMMT 447
>pdb|3SG6|A Chain A, Crystal Structure Of Dimeric Gcamp2-Lia(Linker 1)
Length = 450
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 63/114 (55%), Gaps = 8/114 (7%)
Query: 444 TRDSKGITQEQLNEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRIL 503
TRD +T+EQ+ EF+ +F+ FDK+ G + +E + + SLG + E + Q ++
Sbjct: 302 TRDQ--LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQN-----PTEAELQDMI 354
Query: 504 AVVDPNSTGYVHFDAFLDFMTRESTDTDTAEQVIDSFRILAGD-KPYILPDELR 556
VD + G + F FL M R+ DTD+ E++ ++FR+ D YI ELR
Sbjct: 355 NEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELR 408
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 35/68 (51%), Gaps = 5/68 (7%)
Query: 457 EFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPNSTGYVHF 516
E R +F FDK+ G ++ E + + +LG + + E+D ++ D + G V++
Sbjct: 386 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE---EVD--EMIREADIDGDGQVNY 440
Query: 517 DAFLDFMT 524
+ F+ MT
Sbjct: 441 EEFVQMMT 448
>pdb|3EVU|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2, (#1)
pdb|3EVV|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2 (#2)
pdb|3EK4|A Chain A, Calcium-Saturated Gcamp2 Monomer
pdb|3EK7|A Chain A, Calcium-Saturated Gcamp2 Dimer
Length = 449
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 63/114 (55%), Gaps = 8/114 (7%)
Query: 444 TRDSKGITQEQLNEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRIL 503
TRD +T+EQ+ EF+ +F+ FDK+ G + +E + + SLG + E + Q ++
Sbjct: 301 TRDQ--LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQN-----PTEAELQDMI 353
Query: 504 AVVDPNSTGYVHFDAFLDFMTRESTDTDTAEQVIDSFRILAGD-KPYILPDELR 556
VD + G + F FL M R+ DTD+ E++ ++FR+ D YI ELR
Sbjct: 354 NEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELR 407
Score = 30.8 bits (68), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 35/68 (51%), Gaps = 5/68 (7%)
Query: 457 EFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPNSTGYVHF 516
E R +F FDK+ G ++ E + + +LG + + E+D ++ D + G V++
Sbjct: 385 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE---EVD--EMIREADIDGDGQVNY 439
Query: 517 DAFLDFMT 524
+ F+ MT
Sbjct: 440 EEFVQMMT 447
>pdb|4DJC|A Chain A, 1.35 A Crystal Structure Of The Nav1.5 Diii-Iv-CaCAM
COMPLEX
Length = 152
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 60/108 (55%), Gaps = 6/108 (5%)
Query: 450 ITQEQLNEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPN 509
+T+EQ+ EF+ +F+ FDK+ G + +E + + SLG + E + Q ++ VD +
Sbjct: 8 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQN-----PTEAELQDMINEVDAD 62
Query: 510 STGYVHFDAFLDFMTRESTDTDTAEQVIDSFRILAGD-KPYILPDELR 556
G + F FL M R+ DTD+ E++ ++FR+ D YI ELR
Sbjct: 63 GNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELR 110
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 35/68 (51%), Gaps = 5/68 (7%)
Query: 457 EFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPNSTGYVHF 516
E R +F FDK+ G ++ E + + +LG + + E+D ++ D + G V++
Sbjct: 88 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE---EVD--EMIREADIDGDGQVNY 142
Query: 517 DAFLDFMT 524
+ F+ MT
Sbjct: 143 EEFVQMMT 150
>pdb|1DMO|A Chain A, Calmodulin, Nmr, 30 Structures
pdb|3CLN|A Chain A, Structure Of Calmodulin Refined At 2.2 Angstroms
Resolution
Length = 148
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 60/108 (55%), Gaps = 6/108 (5%)
Query: 450 ITQEQLNEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPN 509
+T+EQ+ EF+ +F+ FDK+ G + +E + + SLG + E + Q ++ VD +
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQN-----PTEAELQDMINEVDAD 58
Query: 510 STGYVHFDAFLDFMTRESTDTDTAEQVIDSFRILAGD-KPYILPDELR 556
G + F FL M R+ DTD+ E++ ++FR+ D YI ELR
Sbjct: 59 GNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELR 106
Score = 30.0 bits (66), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 17/68 (25%), Positives = 35/68 (51%), Gaps = 5/68 (7%)
Query: 457 EFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPNSTGYVHF 516
E R +F FDK+ G ++ E + + +LG + + E+D ++ + + G V++
Sbjct: 84 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE---EVD--EMIREANIDGDGQVNY 138
Query: 517 DAFLDFMT 524
+ F+ MT
Sbjct: 139 EEFVQMMT 146
>pdb|3EWT|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
pdb|3EWV|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
Length = 154
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 60/108 (55%), Gaps = 6/108 (5%)
Query: 450 ITQEQLNEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPN 509
+T+EQ+ EF+ +F+ FDK+ G + +E + + SLG + E + Q ++ VD +
Sbjct: 10 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQN-----PTEAELQDMINEVDAD 64
Query: 510 STGYVHFDAFLDFMTRESTDTDTAEQVIDSFRILAGD-KPYILPDELR 556
G + F FL M R+ DTD+ E++ ++FR+ D YI ELR
Sbjct: 65 GNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELR 112
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 35/68 (51%), Gaps = 5/68 (7%)
Query: 457 EFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPNSTGYVHF 516
E R +F FDK+ G ++ E + + +LG + + E+D ++ D + G V++
Sbjct: 90 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE---EVD--EMIREADIDGDGQVNY 144
Query: 517 DAFLDFMT 524
+ F+ MT
Sbjct: 145 EEFVQMMT 152
>pdb|1CM1|A Chain A, Motions Of Calmodulin-Single-Conformer Refinement
pdb|1CM4|A Chain A, Motions Of Calmodulin-four-conformer Refinement
pdb|1CKK|A Chain A, CalmodulinRAT CA2+CALMODULIN DEPENDENT PROTEIN KINASE
Fragment
pdb|1CFF|A Chain A, Nmr Solution Structure Of A Complex Of Calmodulin With A
Binding Peptide Of The Ca2+-Pump
pdb|1QIV|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd), 1:2
Complex
pdb|1QIW|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1QIW|B Chain B, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1G4Y|R Chain R, 1.60 A Crystal Structure Of The Gating Domain From Small
Conductance Potassium Channel Complexed With
Calcium-Calmodulin
pdb|1K90|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1IWQ|A Chain A, Crystal Structure Of Marcks Calmodulin Binding Domain
Peptide Complexed With Ca2+CALMODULIN
pdb|1NWD|A Chain A, Solution Structure Of Ca2+CALMODULIN BOUND TO THE C-
Terminal Domain Of Petunia Glutamate Decarboxylase
pdb|1L7Z|A Chain A, Crystal Structure Of Ca2+/calmodulin Complexed With
Myristoylated Cap-23/nap-22 Peptide
pdb|1S26|D Chain D, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|E Chain E, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|F Chain F, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1SK6|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1QX5|D Chain D, Crystal Structure Of Apocalmodulin
pdb|1QX5|I Chain I, Crystal Structure Of Apocalmodulin
pdb|1QX5|B Chain B, Crystal Structure Of Apocalmodulin
pdb|1QX5|J Chain J, Crystal Structure Of Apocalmodulin
pdb|1QX5|K Chain K, Crystal Structure Of Apocalmodulin
pdb|1QX5|T Chain T, Crystal Structure Of Apocalmodulin
pdb|1QX5|R Chain R, Crystal Structure Of Apocalmodulin
pdb|1QX5|Y Chain Y, Crystal Structure Of Apocalmodulin
pdb|1XA5|A Chain A, Structure Of Calmodulin In Complex With Kar-2, A Bis-Indol
Alkaloid
pdb|1SY9|A Chain A, Structure Of Calmodulin Complexed With A Fragment Of The
Olfactory Cng Channel
pdb|2F3Y|A Chain A, CalmodulinIQ DOMAIN COMPLEX
pdb|2F3Z|A Chain A, CalmodulinIQ-Aa Domain Complex
pdb|1X02|A Chain A, Solution Structure Of Stereo Array Isotope Labeled (Sail)
Calmodulin
pdb|2DFS|B Chain B, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|C Chain C, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|D Chain D, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|E Chain E, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|F Chain F, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|G Chain G, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|N Chain N, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|O Chain O, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|P Chain P, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|Q Chain Q, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|R Chain R, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|S Chain S, 3-D Structure Of Myosin-V Inhibited State
pdb|1YR5|A Chain A, 1.7-A Structure Of Calmodulin Bound To A Peptide From Dap
Kinase
pdb|2FOT|A Chain A, Crystal Structure Of The Complex Between Calmodulin And
Alphaii-Spectrin
pdb|2BCX|A Chain A, Crystal Structure Of Calmodulin In Complex With A
Ryanodine Receptor Peptide
pdb|1A29|A Chain A, Calmodulin Complexed With Trifluoperazine (1:2 Complex)
pdb|1CFC|A Chain A, Calcium-Free Calmodulin
pdb|1CFD|A Chain A, Calcium-Free Calmodulin
pdb|1CLL|A Chain A, Calmodulin Structure Refined At 1.7 Angstroms Resolution
pdb|1CTR|A Chain A, Drug Binding By Calmodulin: Crystal Structure Of A
Calmodulin-Trifluoperazine Complex
pdb|1LIN|A Chain A, Calmodulin Complexed With Trifluoperazine (1:4 Complex)
pdb|1MUX|A Chain A, Solution Nmr Structure Of CalmodulinW-7 Complex: The Basis
Of Diversity In Molecular Recognition, 30 Structures
pdb|2HQW|A Chain A, Crystal Structure Of Ca2+CALMODULIN BOUND TO NMDA RECEPTOR
NR1C1 Peptide
pdb|2O5G|A Chain A, Calmodulin-Smooth Muscle Light Chain Kinase Peptide
Complex
pdb|2O60|A Chain A, Calmodulin Bound To Peptide From Neuronal Nitric Oxide
Synthase
pdb|3BXK|A Chain A, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXK|C Chain C, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXL|A Chain A, Crystal Structure Of The R-Type Calcium Channel (Cav2.3)
Iq Domain And Ca2+calmodulin Complex
pdb|2K0E|A Chain A, A Coupled Equilibrium Shift Mechanism In Calmodulin-
Mediated Signal Transduction
pdb|2K0F|A Chain A, Calmodulin Complexed With Calmodulin-Binding Peptide From
Smooth Muscle Myosin Light Chain Kinase
pdb|3DVE|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain Complex
pdb|3DVJ|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain (Without
Cloning Artifact, Hm To Tv) Complex
pdb|3DVK|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.3 Iq Domain Complex
pdb|3DVM|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.1 Iq Domain Complex
pdb|2JZI|A Chain A, Structure Of Calmodulin Complexed With The Calmodulin
Binding Domain Of Calcineurin
pdb|3BYA|A Chain A, Structure Of A Calmodulin Complex
pdb|3G43|A Chain A, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|B Chain B, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|C Chain C, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|D Chain D, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|2KNE|A Chain A, Calmodulin Wraps Around Its Binding Domain In The Plasma
Membrane Ca2+ Pump Anchored By A Novel 18-1 Motif
pdb|2KDU|A Chain A, Structural Basis Of The Munc13-1CA2+-Calmodulin
Interaction: A Novel 1-26 Calmodulin Binding Motif With
A Bipartite Binding Mode
pdb|2X0G|B Chain B, X-ray Structure Of A Dap-kinase Calmodulin Complex
pdb|3GOF|A Chain A, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3GOF|B Chain B, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3IF7|A Chain A, Structure Of Calmodulin Complexed With Its First
Endogenous Inhibitor, Sphingosylphosphorylcholine
pdb|2L53|A Chain A, Solution Nmr Structure Of Apo-Calmodulin In Complex With
The Iq Motif Of Human Cardiac Sodium Channel Nav1.5
pdb|2L7L|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
Calmodulin Kinase I
pdb|2LL6|A Chain A, Solution Nmr Structure Of Cam Bound To Inos Cam Binding
Domain Peptide
pdb|2LL7|A Chain A, Solution Nmr Structure Of Cam Bound To The Enos Cam
Binding Domain Peptide
pdb|4EHQ|A Chain A, Crystal Structure Of Calmodulin Binding Domain Of Orai1 In
Complex With Ca2+CALMODULIN DISPLAYS A UNIQUE BINDING
MODE
Length = 148
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 60/108 (55%), Gaps = 6/108 (5%)
Query: 450 ITQEQLNEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPN 509
+T+EQ+ EF+ +F+ FDK+ G + +E + + SLG + E + Q ++ VD +
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQN-----PTEAELQDMINEVDAD 58
Query: 510 STGYVHFDAFLDFMTRESTDTDTAEQVIDSFRILAGD-KPYILPDELR 556
G + F FL M R+ DTD+ E++ ++FR+ D YI ELR
Sbjct: 59 GNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELR 106
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 35/68 (51%), Gaps = 5/68 (7%)
Query: 457 EFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPNSTGYVHF 516
E R +F FDK+ G ++ E + + +LG + + E+D ++ D + G V++
Sbjct: 84 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE---EVD--EMIREADIDGDGQVNY 138
Query: 517 DAFLDFMT 524
+ F+ MT
Sbjct: 139 EEFVQMMT 146
>pdb|3O78|A Chain A, The Structure Of Ca2+ Sensor (Case-12)
pdb|3O78|B Chain B, The Structure Of Ca2+ Sensor (Case-12)
Length = 415
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 63/114 (55%), Gaps = 8/114 (7%)
Query: 444 TRDSKGITQEQLNEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRIL 503
TRD +T+EQ+ EF+ +F+ FDK+ G + +E + + SLG + E + Q ++
Sbjct: 267 TRDQ--LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQN-----PTEAELQDMI 319
Query: 504 AVVDPNSTGYVHFDAFLDFMTRESTDTDTAEQVIDSFRILAGD-KPYILPDELR 556
VD + G + F FL M R+ DTD+ E++ ++FR+ D YI ELR
Sbjct: 320 NEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELR 373
Score = 30.8 bits (68), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 35/68 (51%), Gaps = 5/68 (7%)
Query: 457 EFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPNSTGYVHF 516
E R +F FDK+ G ++ E + + +LG + + E+D ++ D + G V++
Sbjct: 351 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE---EVD--EMIREADIDGDGQVNY 405
Query: 517 DAFLDFMT 524
+ F+ MT
Sbjct: 406 EEFVQMMT 413
>pdb|2F2O|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2O|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
Length = 179
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 60/108 (55%), Gaps = 6/108 (5%)
Query: 450 ITQEQLNEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPN 509
+T+EQ+ EF+ +F+ FDK+ G + +E + + SLG + E + Q ++ VD +
Sbjct: 5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQN-----PTEAELQDMINEVDAD 59
Query: 510 STGYVHFDAFLDFMTRESTDTDTAEQVIDSFRILAGD-KPYILPDELR 556
G + F FL M R+ DTD+ E++ ++FR+ D YI ELR
Sbjct: 60 GNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELR 107
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 35/68 (51%), Gaps = 5/68 (7%)
Query: 457 EFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPNSTGYVHF 516
E R +F FDK+ G ++ E + + +LG + + E+D ++ D + G V++
Sbjct: 85 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE---EVD--EMIREADIDGDGQVNY 139
Query: 517 DAFLDFMT 524
+ F+ MT
Sbjct: 140 EEFVQMMT 147
>pdb|3EVR|A Chain A, Crystal Structure Of Calcium Bound Monomeric Gcamp2
Length = 411
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 63/114 (55%), Gaps = 8/114 (7%)
Query: 444 TRDSKGITQEQLNEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRIL 503
TRD +T+EQ+ EF+ +F+ FDK+ G + +E + + SLG + E + Q ++
Sbjct: 264 TRDQ--LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQN-----PTEAELQDMI 316
Query: 504 AVVDPNSTGYVHFDAFLDFMTRESTDTDTAEQVIDSFRILAGD-KPYILPDELR 556
VD + G + F FL M R+ DTD+ E++ ++FR+ D YI ELR
Sbjct: 317 NEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELR 370
Score = 30.8 bits (68), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 35/68 (51%), Gaps = 5/68 (7%)
Query: 457 EFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPNSTGYVHF 516
E R +F FDK+ G ++ E + + +LG + + E+D ++ D + G V++
Sbjct: 348 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE---EVD--EMIREADIDGDGQVNY 402
Query: 517 DAFLDFMT 524
+ F+ MT
Sbjct: 403 EEFVQMMT 410
>pdb|1XFU|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFV|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFW|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFY|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFZ|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 60/108 (55%), Gaps = 6/108 (5%)
Query: 450 ITQEQLNEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPN 509
+T+EQ+ EF+ +F+ FDK+ G + +E + + SLG + E + Q ++ VD +
Sbjct: 5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQN-----PTEAELQDMINEVDAD 59
Query: 510 STGYVHFDAFLDFMTRESTDTDTAEQVIDSFRILAGD-KPYILPDELR 556
G + F FL M R+ DTD+ E++ ++FR+ D YI ELR
Sbjct: 60 GNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELR 107
Score = 32.3 bits (72), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 36/68 (52%), Gaps = 5/68 (7%)
Query: 457 EFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPNSTGYVHF 516
E R +F FDK+ G ++ E + + +LG + + E+D +++ D + G V++
Sbjct: 85 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE---EVD--QMIREADIDGDGQVNY 139
Query: 517 DAFLDFMT 524
+ F+ MT
Sbjct: 140 EEFVQMMT 147
>pdb|1IQ5|A Chain A, CalmodulinNEMATODE CA2+CALMODULIN DEPENDENT KINASE KINASE
Fragment
pdb|1LVC|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|2BKI|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|2BKI|D Chain D, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|1WRZ|A Chain A, Calmodulin Complexed With A Peptide From A Human
Death-Associated Protein Kinase
pdb|2V01|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Pb
pdb|2V02|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Ba
pdb|2R28|A Chain A, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2R28|B Chain B, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2W73|A Chain A, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|B Chain B, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|E Chain E, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|F Chain F, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|3HR4|B Chain B, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|D Chain D, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|F Chain F, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|H Chain H, Human Inos Reductase And Calmodulin Complex
pdb|3OXQ|A Chain A, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|B Chain B, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|C Chain C, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|D Chain D, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|2Y4V|A Chain A, Crystal Structure Of Human Calmodulin In Complex With A
Dap Kinase-1 Mutant (W305y) Peptide
pdb|3SJQ|A Chain A, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|3SJQ|B Chain B, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|4DCK|B Chain B, Crystal Structure Of The C-Terminus Of Voltage-Gated
Sodium Channel In Complex With Fgf13 And Cam
pdb|3SUI|A Chain A, Crystal Structure Of Ca2+-Calmodulin In Complex With A
Trpv1 C- Terminal Peptide
pdb|4G27|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Phenylurea
pdb|4G28|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Ebio-1
Length = 149
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 60/108 (55%), Gaps = 6/108 (5%)
Query: 450 ITQEQLNEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPN 509
+T+EQ+ EF+ +F+ FDK+ G + +E + + SLG + E + Q ++ VD +
Sbjct: 5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQN-----PTEAELQDMINEVDAD 59
Query: 510 STGYVHFDAFLDFMTRESTDTDTAEQVIDSFRILAGD-KPYILPDELR 556
G + F FL M R+ DTD+ E++ ++FR+ D YI ELR
Sbjct: 60 GNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELR 107
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 35/68 (51%), Gaps = 5/68 (7%)
Query: 457 EFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPNSTGYVHF 516
E R +F FDK+ G ++ E + + +LG + + E+D ++ D + G V++
Sbjct: 85 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE---EVD--EMIREADIDGDGQVNY 139
Query: 517 DAFLDFMT 524
+ F+ MT
Sbjct: 140 EEFVQMMT 147
>pdb|2YGG|B Chain B, Complex Of Cambr And Cam
Length = 150
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 60/108 (55%), Gaps = 6/108 (5%)
Query: 450 ITQEQLNEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPN 509
+T+EQ+ EF+ +F+ FDK+ G + +E + + SLG + E + Q ++ VD +
Sbjct: 5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQN-----PTEAELQDMINEVDAD 59
Query: 510 STGYVHFDAFLDFMTRESTDTDTAEQVIDSFRILAGD-KPYILPDELR 556
G + F FL M R+ DTD+ E++ ++FR+ D YI ELR
Sbjct: 60 GNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELR 107
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 35/68 (51%), Gaps = 5/68 (7%)
Query: 457 EFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPNSTGYVHF 516
E R +F FDK+ G ++ E + + +LG + + E+D ++ D + G V++
Sbjct: 85 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE---EVD--EMIREADIDGDGQVNY 139
Query: 517 DAFLDFMT 524
+ F+ MT
Sbjct: 140 EEFVQMMT 147
>pdb|2WEL|D Chain D, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 150
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 60/108 (55%), Gaps = 6/108 (5%)
Query: 450 ITQEQLNEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPN 509
+T+EQ+ EF+ +F+ FDK+ G + +E + + SLG + E + Q ++ VD +
Sbjct: 6 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQN-----PTEAELQDMINEVDAD 60
Query: 510 STGYVHFDAFLDFMTRESTDTDTAEQVIDSFRILAGD-KPYILPDELR 556
G + F FL M R+ DTD+ E++ ++FR+ D YI ELR
Sbjct: 61 GNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELR 108
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 35/68 (51%), Gaps = 5/68 (7%)
Query: 457 EFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPNSTGYVHF 516
E R +F FDK+ G ++ E + + +LG + + E+D ++ D + G V++
Sbjct: 86 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE---EVD--EMIREADIDGDGQVNY 140
Query: 517 DAFLDFMT 524
+ F+ MT
Sbjct: 141 EEFVQMMT 148
>pdb|2BE6|A Chain A, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|B Chain B, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|C Chain C, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|1ZUZ|A Chain A, Calmodulin In Complex With A Mutant Peptide From Human
Drp-1 Kinase
Length = 150
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 60/108 (55%), Gaps = 6/108 (5%)
Query: 450 ITQEQLNEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPN 509
+T+EQ+ EF+ +F+ FDK+ G + +E + + SLG + E + Q ++ VD +
Sbjct: 5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQN-----PTEAELQDMINEVDAD 59
Query: 510 STGYVHFDAFLDFMTRESTDTDTAEQVIDSFRILAGD-KPYILPDELR 556
G + F FL M R+ DTD+ E++ ++FR+ D YI ELR
Sbjct: 60 GNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELR 107
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 35/68 (51%), Gaps = 5/68 (7%)
Query: 457 EFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPNSTGYVHF 516
E R +F FDK+ G ++ E + + +LG + + E+D ++ D + G V++
Sbjct: 85 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE---EVD--EMIREADIDGDGQVNY 139
Query: 517 DAFLDFMT 524
+ F+ MT
Sbjct: 140 EEFVQMMT 147
>pdb|2VAY|A Chain A, Calmodulin Complexed With Cav1.1 Iq Peptide
pdb|2LGF|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
L-Selectin
Length = 146
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 60/108 (55%), Gaps = 6/108 (5%)
Query: 450 ITQEQLNEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPN 509
+T+EQ+ EF+ +F+ FDK+ G + +E + + SLG + E + Q ++ VD +
Sbjct: 2 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQN-----PTEAELQDMINEVDAD 56
Query: 510 STGYVHFDAFLDFMTRESTDTDTAEQVIDSFRILAGD-KPYILPDELR 556
G + F FL M R+ DTD+ E++ ++FR+ D YI ELR
Sbjct: 57 GNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELR 104
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 35/68 (51%), Gaps = 5/68 (7%)
Query: 457 EFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPNSTGYVHF 516
E R +F FDK+ G ++ E + + +LG + + E+D ++ D + G V++
Sbjct: 82 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE---EVD--EMIREADIDGDGQVNY 136
Query: 517 DAFLDFMT 524
+ F+ MT
Sbjct: 137 EEFVQMMT 144
>pdb|4GOW|D Chain D, Crystal Structure Of Ca2+CAM:KV7.4 (KCNQ4) B HELIX COMPLEX
Length = 144
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 60/108 (55%), Gaps = 6/108 (5%)
Query: 450 ITQEQLNEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPN 509
+T+EQ+ EF+ +F+ FDK+ G + +E + + SLG + E + Q ++ VD +
Sbjct: 2 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQN-----PTEAELQDMINEVDAD 56
Query: 510 STGYVHFDAFLDFMTRESTDTDTAEQVIDSFRILAGD-KPYILPDELR 556
G + F FL M R+ DTD+ E++ ++FR+ D YI ELR
Sbjct: 57 GNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELR 104
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 35/68 (51%), Gaps = 5/68 (7%)
Query: 457 EFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPNSTGYVHF 516
E R +F FDK+ G ++ E + + +LG + + E+D ++ D + G V++
Sbjct: 82 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE---EVD--EMIREADIDGDGQVNY 136
Query: 517 DAFLDFMT 524
+ F+ MT
Sbjct: 137 EEFVQMMT 144
>pdb|3SG7|A Chain A, Crystal Structure Of Gcamp3-Kf(Linker 1)
Length = 448
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 63/114 (55%), Gaps = 8/114 (7%)
Query: 444 TRDSKGITQEQLNEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRIL 503
TRD +T+EQ+ EF+ +F+ FDK+ G + +E + + SLG + E + Q ++
Sbjct: 300 TRDQ--LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQN-----PTEAELQDMI 352
Query: 504 AVVDPNSTGYVHFDAFLDFMTRESTDTDTAEQVIDSFRILAGD-KPYILPDELR 556
VD + G + F FL M R+ DTD+ E++ ++FR+ D YI ELR
Sbjct: 353 NEVDADGDGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELR 406
Score = 30.8 bits (68), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 35/68 (51%), Gaps = 5/68 (7%)
Query: 457 EFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPNSTGYVHF 516
E R +F FDK+ G ++ E + + +LG + + E+D ++ D + G V++
Sbjct: 384 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE---EVD--EMIREADIDGDGQVNY 438
Query: 517 DAFLDFMT 524
+ F+ MT
Sbjct: 439 EEFVQMMT 446
>pdb|2IX7|A Chain A, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
pdb|2IX7|B Chain B, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
Length = 145
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 60/108 (55%), Gaps = 6/108 (5%)
Query: 450 ITQEQLNEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPN 509
+T+EQ+ EF+ +F+ FDK+ G + +E + + SLG + E + Q ++ VD +
Sbjct: 3 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQN-----PTEAELQDMINEVDAD 57
Query: 510 STGYVHFDAFLDFMTRESTDTDTAEQVIDSFRILAGD-KPYILPDELR 556
G + F FL M R+ DTD+ E++ ++FR+ D YI ELR
Sbjct: 58 GNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELR 105
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 35/68 (51%), Gaps = 5/68 (7%)
Query: 457 EFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPNSTGYVHF 516
E R +F FDK+ G ++ E + + +LG + + E+D ++ D + G V++
Sbjct: 83 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE---EVD--EMIREADIDGDGQVNY 137
Query: 517 DAFLDFMT 524
+ F+ MT
Sbjct: 138 EEFVQMMT 145
>pdb|2YCU|A Chain A, Crystal Structure Of Human Non Muscle Myosin 2c In
Pre-power Stroke State
Length = 995
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 98/216 (45%), Gaps = 3/216 (1%)
Query: 4 LQSRQTDNSLSGVQKKLEEYRTYRRKHKPPRVEQKAKLETNFNTLQTKLRLSNRPAYMPT 63
L+SR +S+ VQ + ++ Y++ KPP+ ++ ++LE +N+LQTKLRL R ++
Sbjct: 781 LESRDFGDSIESVQSFMNAHKEYKKTEKPPKGQEVSELEAIYNSLQTKLRLIKREPFVAP 840
Query: 64 EGKMVSDIANAWKGLETSEKSFXXXXXXXXXXXXXXXXXAQKFKHKADIHEDWTRGKEEM 123
G ++I + W LE +E+ QK+ E+W K
Sbjct: 841 AGLTPNEIDSTWSALEKAEQEHAEALRIELKRQKKIAVLLQKYNRILKKLENWATTKSVY 900
Query: 124 LQSSDFRQCKLNELKALKKKHEAFESDLAAHQDRVEQ-IAAIAQELNTLEYHDSVSVNAR 182
L S++ + ++A K EAF+ + + + + + +I +L L Y+ + R
Sbjct: 901 LGSNETGD-SITAVQAKLKNLEAFDGECQSLEGQSNSDLLSILAQLTELNYNGVPELTER 959
Query: 183 CQR-ICDQWDHLGALTQQRRHALDEAEKILEKIDIL 217
QW + + + ++ L + L+KI+ L
Sbjct: 960 KDTFFAQQWTGVKSSAETYKNTLLAELERLQKIEDL 995
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/141 (20%), Positives = 63/141 (44%), Gaps = 17/141 (12%)
Query: 220 EFAKRAAPFNNWLDGTREDLVDMFIVHTMEEIQGLIDAHSQFKAT--------LGEADKE 271
++ KRA W++ + L ++E +Q ++AH ++K T + E +
Sbjct: 762 DYLKRANELVQWINDKQASLESRDFGDSIESVQSFMNAHKEYKKTEKPPKGQEVSELEAI 821
Query: 272 YNSIVNLVREVESTVQQYQIPGGLENPYTALTANDLTKKWTDVRKLVPQRDTTLQAELRK 331
YNS+ +R ++ + + P G LT N++ W+ + K + L+ EL++
Sbjct: 822 YNSLQTKLRLIKR--EPFVAPAG-------LTPNEIDSTWSALEKAEQEHAEALRIELKR 872
Query: 332 QQNNETLRRQFAEKANQVGPW 352
Q+ L +++ ++ W
Sbjct: 873 QKKIAVLLQKYNRILKKLENW 893
>pdb|1CDM|A Chain A, Modulation Of Calmodulin Plasticity In Molecular
Recognition On The Basis Of X-Ray Structures
Length = 144
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 60/108 (55%), Gaps = 6/108 (5%)
Query: 450 ITQEQLNEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPN 509
+T+EQ+ EF+ +F+ FDK+ G + +E + + SLG + E + Q ++ VD +
Sbjct: 1 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQN-----PTEAELQDMINEVDAD 55
Query: 510 STGYVHFDAFLDFMTRESTDTDTAEQVIDSFRILAGD-KPYILPDELR 556
G + F FL M R+ DTD+ E++ ++FR+ D YI ELR
Sbjct: 56 GNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELR 103
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 35/68 (51%), Gaps = 5/68 (7%)
Query: 457 EFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPNSTGYVHF 516
E R +F FDK+ G ++ E + + +LG + + E+D ++ D + G V++
Sbjct: 81 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE---EVD--EMIREADIDGDGQVNY 135
Query: 517 DAFLDFMT 524
+ F+ MT
Sbjct: 136 EEFVQMMT 143
>pdb|1PRW|A Chain A, Crystal Structure Of Bovine Brain Ca++ Calmodulin In A
Compact Form
Length = 149
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 60/108 (55%), Gaps = 6/108 (5%)
Query: 450 ITQEQLNEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPN 509
+T+EQ+ EF+ +F+ FDK+ G + +E + + SLG + E + Q ++ VD +
Sbjct: 5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQN-----PTEAELQDMINEVDAD 59
Query: 510 STGYVHFDAFLDFMTRESTDTDTAEQVIDSFRILAGD-KPYILPDELR 556
G + F FL M R+ DTD+ E++ ++FR+ D YI ELR
Sbjct: 60 GNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELR 107
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 35/68 (51%), Gaps = 5/68 (7%)
Query: 457 EFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPNSTGYVHF 516
E R +F FDK+ G ++ E + + +LG + + E+D ++ D + G V++
Sbjct: 85 EIREAFRVFDKDGNGYISAAELRHVMTNLGEXLTDE---EVD--EMIREADIDGDGQVNY 139
Query: 517 DAFLDFMT 524
+ F+ MT
Sbjct: 140 EEFVQMMT 147
>pdb|1UP5|A Chain A, Chicken Calmodulin
pdb|1UP5|B Chain B, Chicken Calmodulin
Length = 148
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 60/108 (55%), Gaps = 6/108 (5%)
Query: 450 ITQEQLNEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPN 509
+T+EQ+ EF+ +F+ FDK+ G + +E + + SLG + E + Q ++ VD +
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQN-----PTEAELQDMINEVDAD 58
Query: 510 STGYVHFDAFLDFMTRESTDTDTAEQVIDSFRILAGD-KPYILPDELR 556
G + F FL M R+ DTD+ E++ ++FR+ D YI ELR
Sbjct: 59 GNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELR 106
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 35/68 (51%), Gaps = 5/68 (7%)
Query: 457 EFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPNSTGYVHF 516
E R +F FDK+ G ++ E + + +LG + + E+D ++ D + G V++
Sbjct: 84 EIREAFRVFDKDGNGYISAAELRHVMTNLGEXLTDE---EVD--EMIREADIDGDGQVNY 138
Query: 517 DAFLDFMT 524
+ F+ MT
Sbjct: 139 EEFVQMMT 146
>pdb|1CDL|A Chain A, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|B Chain B, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|C Chain C, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|D Chain D, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1PK0|D Chain D, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|E Chain E, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|F Chain F, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|3GP2|A Chain A, Calmodulin Bound To Peptide From Calmodulin Kinase Ii
(Camkii)
Length = 147
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 60/108 (55%), Gaps = 6/108 (5%)
Query: 450 ITQEQLNEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPN 509
+T+EQ+ EF+ +F+ FDK+ G + +E + + SLG + E + Q ++ VD +
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQN-----PTEAELQDMINEVDAD 58
Query: 510 STGYVHFDAFLDFMTRESTDTDTAEQVIDSFRILAGD-KPYILPDELR 556
G + F FL M R+ DTD+ E++ ++FR+ D YI ELR
Sbjct: 59 GNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELR 106
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 35/68 (51%), Gaps = 5/68 (7%)
Query: 457 EFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPNSTGYVHF 516
E R +F FDK+ G ++ E + + +LG + + E+D ++ D + G V++
Sbjct: 84 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE---EVD--EMIREADIDGDGQVNY 138
Query: 517 DAFLDFMT 524
+ F+ MT
Sbjct: 139 EEFVQMMT 146
>pdb|2K0J|A Chain A, Solution Structure Of Cam Complexed To Drp1p
pdb|2K61|A Chain A, Solution Structure Of Cam Complexed To Dapk Peptide
Length = 148
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 60/108 (55%), Gaps = 6/108 (5%)
Query: 450 ITQEQLNEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPN 509
+T+EQ+ EF+ +F+ FDK+ G + +E + + SLG + E + Q ++ VD +
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQN-----PTEAELQDMINEVDAD 58
Query: 510 STGYVHFDAFLDFMTRESTDTDTAEQVIDSFRILAGD-KPYILPDELR 556
G + F FL M R+ DTD+ E++ ++FR+ D YI ELR
Sbjct: 59 GDGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELR 106
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 35/68 (51%), Gaps = 5/68 (7%)
Query: 457 EFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPNSTGYVHF 516
E R +F FDK+ G ++ E + + +LG + + E+D ++ D + G V++
Sbjct: 84 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE---EVD--EMIREADIDGDGQVNY 138
Query: 517 DAFLDFMT 524
+ F+ MT
Sbjct: 139 EEFVQMMT 146
>pdb|1G8X|A Chain A, Structure Of A Genetically Engineered Molecular Motor
pdb|1G8X|B Chain B, Structure Of A Genetically Engineered Molecular Motor
Length = 1010
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 98/216 (45%), Gaps = 3/216 (1%)
Query: 4 LQSRQTDNSLSGVQKKLEEYRTYRRKHKPPRVEQKAKLETNFNTLQTKLRLSNRPAYMPT 63
L+SR +S+ VQ + ++ Y++ KPP+ ++ ++LE +N+LQTKLRL R ++
Sbjct: 789 LESRDFGDSIESVQSFMNAHKEYKKTEKPPKGQEVSELEAIYNSLQTKLRLIKREPFVAP 848
Query: 64 EGKMVSDIANAWKGLETSEKSFXXXXXXXXXXXXXXXXXAQKFKHKADIHEDWTRGKEEM 123
G ++I + W LE +E+ QK+ E+W K
Sbjct: 849 AGLTPNEIDSTWSALEKAEQEHAEALRIELKRQKKIAVLLQKYNRILKKLENWATTKSVY 908
Query: 124 LQSSDFRQCKLNELKALKKKHEAFESDLAAHQDRVEQ-IAAIAQELNTLEYHDSVSVNAR 182
L S++ + ++A K EAF+ + + + + + +I +L L Y+ + R
Sbjct: 909 LGSNETGDS-ITAVQAKLKNLEAFDGECQSLEGQSNSDLLSILAQLTELNYNGVPELTER 967
Query: 183 CQR-ICDQWDHLGALTQQRRHALDEAEKILEKIDIL 217
QW + + + ++ L + L+KI+ L
Sbjct: 968 KDTFFAQQWTGVKSSAETYKNTLLAELERLQKIEDL 1003
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/141 (20%), Positives = 63/141 (44%), Gaps = 17/141 (12%)
Query: 220 EFAKRAAPFNNWLDGTREDLVDMFIVHTMEEIQGLIDAHSQFKAT--------LGEADKE 271
++ KRA W++ + L ++E +Q ++AH ++K T + E +
Sbjct: 770 DYLKRANELVQWINDKQASLESRDFGDSIESVQSFMNAHKEYKKTEKPPKGQEVSELEAI 829
Query: 272 YNSIVNLVREVESTVQQYQIPGGLENPYTALTANDLTKKWTDVRKLVPQRDTTLQAELRK 331
YNS+ +R ++ + + P G LT N++ W+ + K + L+ EL++
Sbjct: 830 YNSLQTKLRLIKR--EPFVAPAG-------LTPNEIDSTWSALEKAEQEHAEALRIELKR 880
Query: 332 QQNNETLRRQFAEKANQVGPW 352
Q+ L +++ ++ W
Sbjct: 881 QKKIAVLLQKYNRILKKLENW 901
>pdb|1K93|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
Length = 144
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 59/107 (55%), Gaps = 6/107 (5%)
Query: 451 TQEQLNEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPNS 510
T+EQ+ EF+ +F+ FDK+ G + +E + + SLG + E + Q ++ VD +
Sbjct: 1 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQN-----PTEAELQDMINEVDADG 55
Query: 511 TGYVHFDAFLDFMTRESTDTDTAEQVIDSFRILAGD-KPYILPDELR 556
G + F FL M R+ DTD+ E++ ++FR+ D YI ELR
Sbjct: 56 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELR 102
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 35/68 (51%), Gaps = 5/68 (7%)
Query: 457 EFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPNSTGYVHF 516
E R +F FDK+ G ++ E + + +LG + + E+D ++ D + G V++
Sbjct: 80 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE---EVD--EMIREADIDGDGQVNY 134
Query: 517 DAFLDFMT 524
+ F+ MT
Sbjct: 135 EEFVQMMT 142
>pdb|3O77|A Chain A, The Structure Of Ca2+ Sensor (Case-16)
Length = 415
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 60/108 (55%), Gaps = 6/108 (5%)
Query: 450 ITQEQLNEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPN 509
+T+EQ+ EF+ +F+ FDK+ G + +E + + SLG + E + Q ++ VD +
Sbjct: 271 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQN-----PTEAELQDMINEVDAD 325
Query: 510 STGYVHFDAFLDFMTRESTDTDTAEQVIDSFRILAGD-KPYILPDELR 556
G + F FL M R+ DTD+ E++ ++FR+ D YI ELR
Sbjct: 326 GNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELR 373
Score = 30.8 bits (68), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 35/68 (51%), Gaps = 5/68 (7%)
Query: 457 EFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPNSTGYVHF 516
E R +F FDK+ G ++ E + + +LG + + E+D ++ D + G V++
Sbjct: 351 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE---EVD--EMIREADIDGDGQVNY 405
Query: 517 DAFLDFMT 524
+ F+ MT
Sbjct: 406 EEFVQMMT 413
>pdb|1Y0V|H Chain H, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|I Chain I, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|J Chain J, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|K Chain K, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|L Chain L, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|M Chain M, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
Length = 146
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 59/107 (55%), Gaps = 6/107 (5%)
Query: 451 TQEQLNEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPNS 510
T+EQ+ EF+ +F+ FDK+ G + +E + + SLG + E + Q ++ VD +
Sbjct: 3 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQN-----PTEAELQDMINEVDADG 57
Query: 511 TGYVHFDAFLDFMTRESTDTDTAEQVIDSFRILAGD-KPYILPDELR 556
G + F FL M R+ DTD+ E++ ++FR+ D YI ELR
Sbjct: 58 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELR 104
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 35/68 (51%), Gaps = 5/68 (7%)
Query: 457 EFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPNSTGYVHF 516
E R +F FDK+ G ++ E + + +LG + + E+D ++ D + G V++
Sbjct: 82 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE---EVD--EMIREADIDGDGQVNY 136
Query: 517 DAFLDFMT 524
+ F+ MT
Sbjct: 137 EEFVQMMT 144
>pdb|3U0K|A Chain A, Crystal Structure Of The Genetically Encoded Calcium
Indicator Rcamp
Length = 440
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 63/114 (55%), Gaps = 8/114 (7%)
Query: 444 TRDSKGITQEQLNEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRIL 503
TRD +T+EQ+ EF+ +F+ FDK+ G + +E + + SLG + E + Q ++
Sbjct: 292 TRDQ--LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQN-----PTEAELQDMI 344
Query: 504 AVVDPNSTGYVHFDAFLDFMTRESTDTDTAEQVIDSFRILAGD-KPYILPDELR 556
VD + G + F FL M R+ DTD+ E++ ++FR+ D YI ELR
Sbjct: 345 NEVDADGDGTIDFPEFLIMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELR 398
Score = 30.8 bits (68), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 35/68 (51%), Gaps = 5/68 (7%)
Query: 457 EFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPNSTGYVHF 516
E R +F FDK+ G ++ E + + +LG + + E+D ++ D + G V++
Sbjct: 376 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE---EVD--EMIREADIDGDGQVNY 430
Query: 517 DAFLDFMT 524
+ F+ MT
Sbjct: 431 EEFVQMMT 438
>pdb|3EKH|A Chain A, Calcium-Saturated Gcamp2 T116vK378W MUTANT MONOMER
Length = 449
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 62/114 (54%), Gaps = 8/114 (7%)
Query: 444 TRDSKGITQEQLNEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRIL 503
TRD +T+EQ+ EF+ +F+ FDK+ G + +E + + SLG + E + Q ++
Sbjct: 301 TRDQ--LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQN-----PTEAELQDMI 353
Query: 504 AVVDPNSTGYVHFDAFLDFMTRESTDTDTAEQVIDSFRILAGD-KPYILPDELR 556
VD + G + F FL M R DTD+ E++ ++FR+ D YI ELR
Sbjct: 354 NEVDADGNGTIDFPEFLTMMARWMKDTDSEEEIREAFRVFDKDGNGYISAAELR 407
Score = 30.8 bits (68), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 35/68 (51%), Gaps = 5/68 (7%)
Query: 457 EFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPNSTGYVHF 516
E R +F FDK+ G ++ E + + +LG + + E+D ++ D + G V++
Sbjct: 385 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE---EVD--EMIREADIDGDGQVNY 439
Query: 517 DAFLDFMT 524
+ F+ MT
Sbjct: 440 EEFVQMMT 447
>pdb|2LMT|A Chain A, Nmr Structure Of Androcam
pdb|2LMU|A Chain A, Androcam At High Calcium
pdb|2LMV|A Chain A, Androcam At High Calcium With Three Explicit Ca2+
Length = 148
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 62/108 (57%), Gaps = 6/108 (5%)
Query: 450 ITQEQLNEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPN 509
+T+EQ+ EF+ +F FDK TG++A E + + +LG + E + Q ++A + N
Sbjct: 4 LTEEQIAEFKDAFVQFDKEGTGKIATRELGTLMRTLGQN-----PTEAELQDLIAEAENN 58
Query: 510 STGYVHFDAFLDFMTRESTDTDTAEQVIDSFRILAGD-KPYILPDELR 556
+ G ++F F M ++ +TDT E++ ++F+I D +I P ELR
Sbjct: 59 NNGQLNFTEFCGIMAKQMRETDTEEEMREAFKIFDRDGDGFISPAELR 106
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 16/64 (25%), Positives = 35/64 (54%), Gaps = 5/64 (7%)
Query: 457 EFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPNSTGYVHF 516
E R +F FD++ G ++P E + +++LG + + EID ++ D + G +++
Sbjct: 84 EMREAFKIFDRDGDGFISPAELRFVMINLGEKVTDE---EID--EMIREADFDGDGMINY 138
Query: 517 DAFL 520
+ F+
Sbjct: 139 EEFV 142
>pdb|2BKH|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure
pdb|2VAS|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigor State
pdb|3GN4|B Chain B, Myosin Lever Arm
pdb|3GN4|D Chain D, Myosin Lever Arm
pdb|3GN4|F Chain F, Myosin Lever Arm
pdb|3GN4|H Chain H, Myosin Lever Arm
pdb|3L9I|C Chain C, Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant Crystal
Structure
pdb|2X51|B Chain B, M6 Delta Insert1
pdb|4ANJ|B Chain B, Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke State
(Mg.Adp.Alf4)
pdb|4DBP|C Chain C, Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal
Structure
pdb|4DBQ|B Chain B, Myosin Vi D179y (md-insert2-cam, Delta-insert1) Post-rigor
State
Length = 149
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 60/108 (55%), Gaps = 6/108 (5%)
Query: 450 ITQEQLNEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPN 509
+T+EQ+ EF+ +F+ FDK+ G + +E + + SLG + E + Q ++ VD +
Sbjct: 5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQN-----PTEAELQDMINEVDAD 59
Query: 510 STGYVHFDAFLDFMTRESTDTDTAEQVIDSFRILAGD-KPYILPDELR 556
G + F FL M R+ DTD+ E++ ++FR+ D +I ELR
Sbjct: 60 GNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELR 107
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 35/68 (51%), Gaps = 5/68 (7%)
Query: 457 EFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPNSTGYVHF 516
E R +F FDK+ G ++ E + + +LG + + E+D ++ D + G V++
Sbjct: 85 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDE---EVD--EMIREADIDGDGQVNY 139
Query: 517 DAFLDFMT 524
+ F+ MT
Sbjct: 140 EEFVTMMT 147
>pdb|1OOJ|A Chain A, Structural Genomics Of Caenorhabditis Elegans : Calmodulin
Length = 149
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 60/108 (55%), Gaps = 6/108 (5%)
Query: 450 ITQEQLNEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPN 509
+T+EQ+ EF+ +F+ FDK+ G + +E + + SLG + E + Q ++ VD +
Sbjct: 5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQN-----PTEAELQDMINEVDAD 59
Query: 510 STGYVHFDAFLDFMTRESTDTDTAEQVIDSFRILAGD-KPYILPDELR 556
G + F FL M R+ DTD+ E++ ++FR+ D +I ELR
Sbjct: 60 GNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELR 107
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 35/68 (51%), Gaps = 5/68 (7%)
Query: 457 EFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPNSTGYVHF 516
E R +F FDK+ G ++ E + + +LG + + E+D ++ D + G V++
Sbjct: 85 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDE---EVD--EMIREADIDGDGQVNY 139
Query: 517 DAFLDFMT 524
+ F+ MT
Sbjct: 140 EEFVTMMT 147
>pdb|2VB6|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigor State
( Crystal Form 2)
Length = 149
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 60/108 (55%), Gaps = 6/108 (5%)
Query: 450 ITQEQLNEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPN 509
+T+EQ+ EF+ +F+ FDK+ G + +E + + SLG + E + Q ++ VD +
Sbjct: 5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQN-----PTEAELQDMINEVDAD 59
Query: 510 STGYVHFDAFLDFMTRESTDTDTAEQVIDSFRILAGD-KPYILPDELR 556
G + F FL M R+ DTD+ E++ ++FR+ D +I ELR
Sbjct: 60 GNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELR 107
Score = 30.4 bits (67), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 35/68 (51%), Gaps = 5/68 (7%)
Query: 457 EFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPNSTGYVHF 516
E R +F FDK+ G ++ E + + +LG + + E+D ++ D + G V++
Sbjct: 85 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDE---EVD--EMIRESDIDGDGQVNY 139
Query: 517 DAFLDFMT 524
+ F+ MT
Sbjct: 140 EEFVTMMT 147
>pdb|2LV6|A Chain A, The Complex Between Ca-calmodulin And Skeletal Muscle
Myosin Light Chain Kinase From Combination Of Nmr And
Aqueous And Contrast-matched Saxs Data
Length = 148
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 60/108 (55%), Gaps = 6/108 (5%)
Query: 450 ITQEQLNEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPN 509
+T+EQ+ EF+ +F+ FDK+ G + +E + + SLG + E + Q ++ VD +
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQN-----PTEAELQDMINEVDAD 58
Query: 510 STGYVHFDAFLDFMTRESTDTDTAEQVIDSFRILAGD-KPYILPDELR 556
G + F FL M R+ DTD+ E++ ++FR+ D +I ELR
Sbjct: 59 GNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELR 106
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 35/68 (51%), Gaps = 5/68 (7%)
Query: 457 EFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPNSTGYVHF 516
E R +F FDK+ G ++ E + + +LG + + E+D ++ D + G V++
Sbjct: 84 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDE---EVD--EMIREADIDGDGQVNY 138
Query: 517 DAFLDFMT 524
+ F+ MT
Sbjct: 139 EEFVTMMT 146
>pdb|1RFJ|A Chain A, Crystal Structure Of Potato Calmodulin Pcm6
Length = 149
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 63/108 (58%), Gaps = 6/108 (5%)
Query: 450 ITQEQLNEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPN 509
+T++Q++EF+ +F+ FDK+ G + +E + + SLG + E + Q ++ VD +
Sbjct: 5 LTEDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQN-----PTEAELQDMINEVDAD 59
Query: 510 STGYVHFDAFLDFMTRESTDTDTAEQVIDSFRILAGDK-PYILPDELR 556
G + F FL+ M R+ DTD+ E++ ++FR+ D+ +I ELR
Sbjct: 60 GNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELR 107
Score = 30.0 bits (66), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 16/67 (23%), Positives = 35/67 (52%), Gaps = 5/67 (7%)
Query: 457 EFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPNSTGYVHF 516
E + +F FDK++ G ++ E + + +LG + + E+D ++ D + G +++
Sbjct: 85 ELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE---EVD--EMIREADVDGDGQINY 139
Query: 517 DAFLDFM 523
D F+ M
Sbjct: 140 DEFVKVM 146
>pdb|1QTX|A Chain A, The 1.65 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 60/108 (55%), Gaps = 6/108 (5%)
Query: 450 ITQEQLNEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPN 509
+T EQ+ EF+ +F+ FDK+ G + +E + + SLG + E + Q ++ VD +
Sbjct: 4 LTDEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQN-----PTEAELQDMINEVDAD 58
Query: 510 STGYVHFDAFLDFMTRESTDTDTAEQVIDSFRILAGD-KPYILPDELR 556
G + F FL+ M R+ DTD+ E++ ++FR+ D +I ELR
Sbjct: 59 GNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDGNGFISAAELR 106
>pdb|2BBM|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|2BBN|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|1MXE|A Chain A, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|1MXE|B Chain B, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|4CLN|A Chain A, Structure Of A Recombinant Calmodulin From Drosophila
Melanogaster Refined At 2.2-Angstroms Resolution
Length = 148
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 60/108 (55%), Gaps = 6/108 (5%)
Query: 450 ITQEQLNEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPN 509
+T+EQ+ EF+ +F+ FDK+ G + +E + + SLG + E + Q ++ VD +
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQN-----PTEAELQDMINEVDAD 58
Query: 510 STGYVHFDAFLDFMTRESTDTDTAEQVIDSFRILAGD-KPYILPDELR 556
G + F FL M R+ DTD+ E++ ++FR+ D +I ELR
Sbjct: 59 GNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELR 106
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 35/68 (51%), Gaps = 5/68 (7%)
Query: 457 EFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPNSTGYVHF 516
E R +F FDK+ G ++ E + + +LG + + E+D ++ D + G V++
Sbjct: 84 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDE---EVD--EMIREADIDGDGQVNY 138
Query: 517 DAFLDFMT 524
+ F+ MT
Sbjct: 139 EEFVTMMT 146
>pdb|1QS7|A Chain A, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
pdb|1QS7|C Chain C, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 145
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 60/108 (55%), Gaps = 6/108 (5%)
Query: 450 ITQEQLNEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPN 509
+T EQ+ EF+ +F+ FDK+ G + +E + + SLG + E + Q ++ VD +
Sbjct: 1 LTDEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQN-----PTEAELQDMINEVDAD 55
Query: 510 STGYVHFDAFLDFMTRESTDTDTAEQVIDSFRILAGD-KPYILPDELR 556
G + F FL+ M R+ DTD+ E++ ++FR+ D +I ELR
Sbjct: 56 GNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDGNGFISAAELR 103
>pdb|1VRK|A Chain A, The 1.9 Angstrom Structure Of E84k-Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 60/108 (55%), Gaps = 6/108 (5%)
Query: 450 ITQEQLNEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPN 509
+T EQ+ EF+ +F+ FDK+ G + +E + + SLG + E + Q ++ VD +
Sbjct: 4 LTDEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQN-----PTEAELQDMINEVDAD 58
Query: 510 STGYVHFDAFLDFMTRESTDTDTAEQVIDSFRILAGD-KPYILPDELR 556
G + F FL+ M R+ DTD+ E++ ++FR+ D +I ELR
Sbjct: 59 GNGTIDFPEFLNLMARKMKDTDSEEKLKEAFRVFDKDGNGFISAAELR 106
>pdb|3QRX|A Chain A, Chlamydomonas Reinhardtii Centrin Bound To Melittin
Length = 169
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 70/127 (55%), Gaps = 9/127 (7%)
Query: 449 GITQEQLNEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDP 508
G+T+EQ E R +F+ FD + +G + +E K + +LG+ K+ + +++++ +D
Sbjct: 21 GLTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKE-----EIKKMISEIDK 75
Query: 509 NSTGYVHFDAFLDFMTRESTDTDTAEQVIDSFRILAGDKP-YILPDELRR---ELPPDQA 564
+ +G + F+ FL MT + + D+ E+++ +FR+ D I +LRR EL +
Sbjct: 76 DGSGTIDFEEFLTMMTAKMGERDSREEILKAFRLFDDDNSGTITIKDLRRVAKELGENLT 135
Query: 565 EYCIQRM 571
E +Q M
Sbjct: 136 EEELQEM 142
>pdb|4AQR|A Chain A, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
pdb|4AQR|B Chain B, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
Length = 149
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 62/108 (57%), Gaps = 6/108 (5%)
Query: 450 ITQEQLNEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPN 509
+T +Q++EF+ +F+ FDK+ G + +E + + SLG + E + Q ++ VD +
Sbjct: 5 LTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQN-----PTEAELQDMINEVDAD 59
Query: 510 STGYVHFDAFLDFMTRESTDTDTAEQVIDSFRILAGDK-PYILPDELR 556
G + F FL+ M R+ DTD+ E++ ++FR+ D+ +I ELR
Sbjct: 60 GNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELR 107
>pdb|3SG2|A Chain A, Crystal Structure Of Gcamp2-T116v,D381y
Length = 449
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 62/114 (54%), Gaps = 8/114 (7%)
Query: 444 TRDSKGITQEQLNEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRIL 503
TRD +T+EQ+ EF+ +F+ FDK+ G + +E + + SLG + E + Q ++
Sbjct: 301 TRDQ--LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQN-----PTEAELQDMI 353
Query: 504 AVVDPNSTGYVHFDAFLDFMTRESTDTDTAEQVIDSFRILAGD-KPYILPDELR 556
VD + G + F FL M R+ TD+ E++ ++FR+ D YI ELR
Sbjct: 354 NEVDADGNGTIDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELR 407
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 35/68 (51%), Gaps = 5/68 (7%)
Query: 457 EFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPNSTGYVHF 516
E R +F FDK+ G ++ E + + +LG + + E+D ++ D + G V++
Sbjct: 385 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE---EVD--EMIREADIDGDGQVNY 439
Query: 517 DAFLDFMT 524
+ F+ MT
Sbjct: 440 EEFVQMMT 447
>pdb|3EKJ|A Chain A, Calcium-Free Gcamp2 (Calcium Binding Deficient Mutant)
Length = 449
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 62/114 (54%), Gaps = 8/114 (7%)
Query: 444 TRDSKGITQEQLNEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRIL 503
TRD +T+EQ+ EF+ +F+ FDK+ G + ++ + + SLG + E + Q ++
Sbjct: 301 TRDQ--LTEEQIAEFKEAFSLFDKDGDGGITTKQLGTVMRSLGQN-----PTEAELQDMI 353
Query: 504 AVVDPNSTGYVHFDAFLDFMTRESTDTDTAEQVIDSFRILAGD-KPYILPDELR 556
V + G + F FL M R+ DTD+ E++ ++FR+ D YI +LR
Sbjct: 354 NEVGADGNGTIDFPQFLTMMARKMKDTDSEEEIREAFRVFGKDGNGYISAAQLR 407
>pdb|3SG3|A Chain A, Crystal Structure Of Gcamp3-D380y
Length = 449
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 62/114 (54%), Gaps = 8/114 (7%)
Query: 444 TRDSKGITQEQLNEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRIL 503
TRD +T+EQ+ EF+ +F+ FDK+ G + +E + + SLG + E + Q ++
Sbjct: 301 TRDQ--LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQN-----PTEAELQDMI 353
Query: 504 AVVDPNSTGYVHFDAFLDFMTRESTDTDTAEQVIDSFRILAGD-KPYILPDELR 556
VD + G + F FL M R+ TD+ E++ ++FR+ D YI ELR
Sbjct: 354 NEVDADGDGTIDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELR 407
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 35/68 (51%), Gaps = 5/68 (7%)
Query: 457 EFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPNSTGYVHF 516
E R +F FDK+ G ++ E + + +LG + + E+D ++ D + G V++
Sbjct: 385 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE---EVD--EMIREADIDGDGQVNY 439
Query: 517 DAFLDFMT 524
+ F+ MT
Sbjct: 440 EEFVQMMT 447
>pdb|3KF9|A Chain A, Crystal Structure Of The SdcenSKMLCK COMPLEX
pdb|3KF9|C Chain C, Crystal Structure Of The SdcenSKMLCK COMPLEX
Length = 149
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 58/98 (59%), Gaps = 5/98 (5%)
Query: 449 GITQEQLNEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDP 508
G+T+EQ E R +F+ FD + +G + +E K + +LG+ K+ + ++++A +D
Sbjct: 1 GLTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKE-----EIKKMIADIDK 55
Query: 509 NSTGYVHFDAFLDFMTRESTDTDTAEQVIDSFRILAGD 546
+ +G + F+ FL MT + + D+ E+++ +FR+ D
Sbjct: 56 DGSGTIDFEEFLQMMTAKMGERDSREEIMKAFRLFDDD 93
>pdb|2L1W|A Chain A, The Solution Structure Of Soybean Calmodulin Isoform 4
Complexed With The Vacuolar Calcium Atpase Bca1 Peptide
Length = 149
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 60/108 (55%), Gaps = 6/108 (5%)
Query: 450 ITQEQLNEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPN 509
+++EQ+ +F+ +F FDK+ G + EE + + SL + E + Q +++ VD +
Sbjct: 4 LSEEQIVDFKEAFGLFDKDGDGCITVEELATVIRSLDQN-----PTEEELQDMISEVDAD 58
Query: 510 STGYVHFDAFLDFMTRESTDTDTAEQVIDSFRILAGDK-PYILPDELR 556
G + FD FL M ++ DTD E++ ++F++ D+ YI ELR
Sbjct: 59 GNGTIEFDEFLSLMAKKVKDTDAEEELKEAFKVFDKDQNGYISASELR 106
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 14/67 (20%), Positives = 35/67 (52%), Gaps = 5/67 (7%)
Query: 457 EFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPNSTGYVHF 516
E + +F FDK++ G ++ E + +++LG + + ++++ D + G V++
Sbjct: 84 ELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEE-----VEQMIKEADLDGDGQVNY 138
Query: 517 DAFLDFM 523
+ F+ M
Sbjct: 139 EEFVKMM 145
>pdb|3SG4|A Chain A, Crystal Structure Of Gcamp3-D380y, Lp(Linker 2)
Length = 448
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 59/108 (54%), Gaps = 6/108 (5%)
Query: 450 ITQEQLNEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPN 509
+T+EQ+ EF+ +F+ FDK+ G + +E + + SLG + E + Q ++ VD +
Sbjct: 304 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQN-----PTEAELQDMINEVDAD 358
Query: 510 STGYVHFDAFLDFMTRESTDTDTAEQVIDSFRILAGD-KPYILPDELR 556
G + F FL M R+ TD+ E++ ++FR+ D YI ELR
Sbjct: 359 GDGTIDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELR 406
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 35/68 (51%), Gaps = 5/68 (7%)
Query: 457 EFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPNSTGYVHF 516
E R +F FDK+ G ++ E + + +LG + + E+D ++ D + G V++
Sbjct: 384 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE---EVD--EMIREADIDGDGQVNY 438
Query: 517 DAFLDFMT 524
+ F+ MT
Sbjct: 439 EEFVQMMT 446
>pdb|3SG5|A Chain A, Crystal Structure Of Dimeric Gcamp3-D380y, Qp(Linker 1),
Lp(Linker 2)
Length = 448
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 59/108 (54%), Gaps = 6/108 (5%)
Query: 450 ITQEQLNEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPN 509
+T+EQ+ EF+ +F+ FDK+ G + +E + + SLG + E + Q ++ VD +
Sbjct: 304 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQN-----PTEAELQDMINEVDAD 358
Query: 510 STGYVHFDAFLDFMTRESTDTDTAEQVIDSFRILAGD-KPYILPDELR 556
G + F FL M R+ TD+ E++ ++FR+ D YI ELR
Sbjct: 359 GDGTIDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELR 406
Score = 30.8 bits (68), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 35/68 (51%), Gaps = 5/68 (7%)
Query: 457 EFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPNSTGYVHF 516
E R +F FDK+ G ++ E + + +LG + + E+D ++ D + G V++
Sbjct: 384 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE---EVD--EMIREADIDGDGQVNY 438
Query: 517 DAFLDFMT 524
+ F+ MT
Sbjct: 439 EEFVQMMT 446
>pdb|1DEG|A Chain A, The Linker Of Des-Glu84 Calmodulin Is Bent As Seen In The
Crystal Structure
Length = 142
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 59/107 (55%), Gaps = 7/107 (6%)
Query: 451 TQEQLNEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPNS 510
T+EQ+ EF+ +F+ FDK+ G + +E + + SLG + E + Q ++ VD +
Sbjct: 1 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQN-----PTEAELQDMINEVDADG 55
Query: 511 TGYVHFDAFLDFMTRESTDTDTAEQVIDSFRILAGD-KPYILPDELR 556
G + F FL M R+ DTD +E++ ++FR+ D YI ELR
Sbjct: 56 NGTIDFPEFLTMMARKMKDTD-SEEIREAFRVFDKDGNGYISAAELR 101
Score = 29.6 bits (65), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 17/68 (25%), Positives = 35/68 (51%), Gaps = 5/68 (7%)
Query: 457 EFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPNSTGYVHF 516
E R +F FDK+ G ++ E + + +LG + + E+D ++ + + G V++
Sbjct: 79 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE---EVD--EMIREANIDGDGQVNY 133
Query: 517 DAFLDFMT 524
+ F+ MT
Sbjct: 134 EEFVQMMT 141
>pdb|1GGZ|A Chain A, Crystal Structure Of The Calmodulin-Like Protein (Hclp)
From Human Epithelial Cells
Length = 148
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 59/108 (54%), Gaps = 6/108 (5%)
Query: 450 ITQEQLNEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPN 509
+T+EQ+ EF+ +F+ FDK+ G + E + + SLG + E + + +++ +D +
Sbjct: 4 LTEEQVTEFKEAFSLFDKDGDGCITTRELGTVMRSLGQN-----PTEAELRDMMSEIDRD 58
Query: 510 STGYVHFDAFLDFMTRESTDTDTAEQVIDSFRILAGD-KPYILPDELR 556
G V F FL M R+ DTD E++ ++FR+ D ++ ELR
Sbjct: 59 GNGTVDFPEFLGMMARKMKDTDNEEEIREAFRVFDKDGNGFVSAAELR 106
>pdb|2OBH|A Chain A, Centrin-Xpc Peptide
pdb|2OBH|B Chain B, Centrin-Xpc Peptide
Length = 143
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 57/96 (59%), Gaps = 5/96 (5%)
Query: 451 TQEQLNEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPNS 510
T+EQ E R +F+ FD + TG + +E K + +LG+ K+ + +++++ +D
Sbjct: 1 TEEQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKE-----EIKKMISEIDKEG 55
Query: 511 TGYVHFDAFLDFMTRESTDTDTAEQVIDSFRILAGD 546
TG ++F FL MT++ ++ DT E+++ +F++ D
Sbjct: 56 TGKMNFGDFLTVMTQKMSEKDTKEEILKAFKLFDDD 91
>pdb|3IFK|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
pdb|3IFK|B Chain B, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
Length = 90
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 53/92 (57%), Gaps = 5/92 (5%)
Query: 450 ITQEQLNEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPN 509
+T+EQ+ EF+ +F+ FDK+ G + +E + + SLG + E + Q ++ VD +
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQN-----PTEAELQDMINEVDAD 58
Query: 510 STGYVHFDAFLDFMTRESTDTDTAEQVIDSFR 541
G + F FL M R+ DTD+ E++ ++FR
Sbjct: 59 GNGTIDFPEFLTMMARKMKDTDSEEEIREAFR 90
>pdb|1XFX|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 57/108 (52%), Gaps = 6/108 (5%)
Query: 450 ITQEQLNEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPN 509
+T+EQ+ EF+ +F+ FDK+ G + +E + SLG + E + Q + VD +
Sbjct: 5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVXRSLGQN-----PTEAELQDXINEVDAD 59
Query: 510 STGYVHFDAFLDFMTRESTDTDTAEQVIDSFRILAGD-KPYILPDELR 556
G + F FL R+ DTD+ E++ ++FR+ D YI ELR
Sbjct: 60 GNGTIDFPEFLTXXARKXKDTDSEEEIREAFRVFDKDGNGYISAAELR 107
>pdb|1NIW|A Chain A, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|C Chain C, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|E Chain E, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|G Chain G, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1QX7|I Chain I, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|R Chain R, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|A Chain A, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|B Chain B, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|M Chain M, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
Length = 148
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 57/108 (52%), Gaps = 6/108 (5%)
Query: 450 ITQEQLNEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPN 509
+T+EQ+ EF+ +F+ FDK+ G + +E + SLG + E + Q + VD +
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVXRSLGQN-----PTEAELQDXINEVDAD 58
Query: 510 STGYVHFDAFLDFMTRESTDTDTAEQVIDSFRILAGD-KPYILPDELR 556
G + F FL R+ DTD+ E++ ++FR+ D YI ELR
Sbjct: 59 GNGTIDFPEFLTXXARKXKDTDSEEEIREAFRVFDKDGNGYISAAELR 106
>pdb|1Y6W|A Chain A, Trapped Intermediate Of Calmodulin
Length = 148
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 57/108 (52%), Gaps = 6/108 (5%)
Query: 450 ITQEQLNEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPN 509
+T+EQ+ EF+ +F+ FDK+ G + +E + SLG + E + Q + VD +
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVXRSLGCN-----PTEAELQDXINEVDAD 58
Query: 510 STGYVHFDAFLDFMTRESTDTDTAEQVIDSFRILAGD-KPYILPDELR 556
G ++F FL R DTD+ E++ ++FR+ D YI ELR
Sbjct: 59 GNGTINFPEFLTXXARCXKDTDSEEEIREAFRVFDKDGNGYISAAELR 106
>pdb|1CLM|A Chain A, Structure Of Paramecium Tetraurelia Calmodulin At 1.8
Angstroms Resolution
Length = 148
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 58/108 (53%), Gaps = 6/108 (5%)
Query: 450 ITQEQLNEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPN 509
+T+EQ+ EF+ +F FDK+ G + +E + + SLG + E + Q ++ VD +
Sbjct: 4 LTEEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQN-----PTEAELQDMINEVDAD 58
Query: 510 STGYVHFDAFLDFMTRESTDTDTAEQVIDSFRILAGD-KPYILPDELR 556
G + F FL M R+ + D+ E++I++F++ D I ELR
Sbjct: 59 GNGTIDFPEFLSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELR 106
Score = 28.5 bits (62), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 16/73 (21%), Positives = 36/73 (49%), Gaps = 5/73 (6%)
Query: 452 QEQLNEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPNST 511
Q+ E +F FD++ G ++ E + + +LG + D E+D ++ D +
Sbjct: 79 QDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDD---EVD--EMIREADIDGD 133
Query: 512 GYVHFDAFLDFMT 524
G+++++ F+ M
Sbjct: 134 GHINYEEFVRMMV 146
>pdb|1EXR|A Chain A, The 1.0 Angstrom Crystal Structure Of Ca+2 Bound
Calmodulin
pdb|1N0Y|A Chain A, Crystal Structure Of Pb-Bound Calmodulin
pdb|1N0Y|B Chain B, Crystal Structure Of Pb-Bound Calmodulin
pdb|1OSA|A Chain A, Crystal Structure Of Recombinant Paramecium Tetraurelia
Calmodulin At 1.68 Angstroms Resolution
Length = 148
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 58/108 (53%), Gaps = 6/108 (5%)
Query: 450 ITQEQLNEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPN 509
+T+EQ+ EF+ +F FDK+ G + +E + + SLG + E + Q ++ VD +
Sbjct: 4 LTEEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQN-----PTEAELQDMINEVDAD 58
Query: 510 STGYVHFDAFLDFMTRESTDTDTAEQVIDSFRILAGD-KPYILPDELR 556
G + F FL M R+ + D+ E++I++F++ D I ELR
Sbjct: 59 GNGTIDFPEFLSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELR 106
Score = 28.5 bits (62), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 16/73 (21%), Positives = 36/73 (49%), Gaps = 5/73 (6%)
Query: 452 QEQLNEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPNST 511
Q+ E +F FD++ G ++ E + + +LG + D E+D ++ D +
Sbjct: 79 QDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDD---EVD--EMIREADIDGD 133
Query: 512 GYVHFDAFLDFMT 524
G+++++ F+ M
Sbjct: 134 GHINYEEFVRMMV 146
>pdb|1AHR|A Chain A, Calmodulin Mutant With A Two Residue Deletion In The
Central Helix
Length = 146
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 59/108 (54%), Gaps = 8/108 (7%)
Query: 450 ITQEQLNEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPN 509
+T+EQ+ EF+ +F+ FDK+ G + +E + + SLG + E + Q ++ VD +
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQN-----PTEAELQDMINEVDAD 58
Query: 510 STGYVHFDAFLDFMTRESTDTDTAEQVIDSFRILAGD-KPYILPDELR 556
G + F FL M R+ D++ E++ ++FR+ D +I ELR
Sbjct: 59 GNGTIDFPEFLTMMARKMKDSE--EEIREAFRVFDKDGNGFISAAELR 104
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 35/68 (51%), Gaps = 5/68 (7%)
Query: 457 EFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPNSTGYVHF 516
E R +F FDK+ G ++ E + + +LG + + E+D ++ D + G V++
Sbjct: 82 EIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDE---EVD--EMIREADIDGDGQVNY 136
Query: 517 DAFLDFMT 524
+ F+ MT
Sbjct: 137 EEFVTMMT 144
>pdb|1LKJ|A Chain A, Nmr Structure Of Apo Calmodulin From Yeast Saccharomyces
Cerevisiae
Length = 146
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/148 (22%), Positives = 67/148 (45%), Gaps = 25/148 (16%)
Query: 447 SKGITQEQLNEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVV 506
S +T+EQ+ EF+ +F FDK+ G ++ E + + SLG S E + ++ +
Sbjct: 1 SSNLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLS-----PSEAEVNDLMNEI 55
Query: 507 DPNSTGYVHFDAFLDFMTRESTDTDTAEQVIDSFRIL---------AGDKPYILP----- 552
D + + F FL M+R+ D+ ++++++F++ A + ++L
Sbjct: 56 DVDGNHQIEFSEFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEK 115
Query: 553 ------DELRRELPPDQAEYCIQRMPPY 574
D++ RE+ E IQ+
Sbjct: 116 LTDAEVDDMLREVSDGSGEINIQQFAAL 143
Score = 30.8 bits (68), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 34/76 (44%), Gaps = 13/76 (17%)
Query: 442 ILTRDSKGITQEQLNEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIG----------- 490
+++R K EQ E +F FDKN G ++ E K L S+G +
Sbjct: 71 LMSRQLKSNDSEQ--ELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDDMLREV 128
Query: 491 KDRQGEIDFQRILAVV 506
D GEI+ Q+ A++
Sbjct: 129 SDGSGEINIQQFAALL 144
>pdb|2LHH|A Chain A, Solution Structure Of Ca2+-Bound Ycam
Length = 128
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 52/97 (53%), Gaps = 5/97 (5%)
Query: 447 SKGITQEQLNEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVV 506
S +T+EQ+ EF+ +F FDK+ G ++ E + + SLG S E + ++ +
Sbjct: 1 SSNLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLS-----PSEAEVNDLMNEI 55
Query: 507 DPNSTGYVHFDAFLDFMTRESTDTDTAEQVIDSFRIL 543
D + + F FL M+R+ D+ ++++++F++
Sbjct: 56 DVDGNHQIEFSEFLALMSRQLKSNDSEQELLEAFKVF 92
>pdb|2LHI|A Chain A, Solution Structure Of Ca2+CNA1 PEPTIDE-Bound Ycam
Length = 176
Score = 52.0 bits (123), Expect = 9e-07, Method: Composition-based stats.
Identities = 25/97 (25%), Positives = 52/97 (53%), Gaps = 5/97 (5%)
Query: 447 SKGITQEQLNEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVV 506
S +T+EQ+ EF+ +F FDK+ G ++ E + + SLG S E + ++ +
Sbjct: 2 SSNLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLS-----PSEAEVNDLMNEI 56
Query: 507 DPNSTGYVHFDAFLDFMTRESTDTDTAEQVIDSFRIL 543
D + + F FL M+R+ D+ ++++++F++
Sbjct: 57 DVDGNHQIEFSEFLALMSRQLKSNDSEQELLEAFKVF 93
Score = 30.0 bits (66), Expect = 3.5, Method: Composition-based stats.
Identities = 23/81 (28%), Positives = 36/81 (44%), Gaps = 13/81 (16%)
Query: 442 ILTRDSKGITQEQLNEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIG----------- 490
+++R K EQ E +F FDKN G ++ E K L S+G +
Sbjct: 72 LMSRQLKSNDSEQ--ELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDDMLREV 129
Query: 491 KDRQGEIDFQRILAVVDPNST 511
D GEI+ Q+ A++ S+
Sbjct: 130 SDGSGEINIQQFAALLSKGSS 150
>pdb|4DS7|A Chain A, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|B Chain B, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|C Chain C, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|D Chain D, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
Length = 147
Score = 51.2 bits (121), Expect = 1e-06, Method: Composition-based stats.
Identities = 25/97 (25%), Positives = 54/97 (55%), Gaps = 5/97 (5%)
Query: 447 SKGITQEQLNEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVV 506
S+ +T+EQ+ EF+ +F FDK+ +G ++ E + + SLG S E + ++ +
Sbjct: 2 SQNLTEEQIAEFKEAFALFDKDNSGSISASELATVMRSLGLS-----PSEAEVADLMNEI 56
Query: 507 DPNSTGYVHFDAFLDFMTRESTDTDTAEQVIDSFRIL 543
D + + F FL M+R+ D+ ++++++F++
Sbjct: 57 DVDGNHAIEFSEFLALMSRQLKCNDSEQELLEAFKVF 93
>pdb|2LLO|A Chain A, Solution Nmr-Derived Structure Of Calmodulin N-Lobe Bound
With Er Alpha Peptide
Length = 80
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 45/82 (54%), Gaps = 5/82 (6%)
Query: 450 ITQEQLNEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPN 509
+T+EQ+ EF+ +F+ FDK+ G + +E + + SLG + E + Q ++ VD +
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQN-----PTEAELQDMINEVDAD 58
Query: 510 STGYVHFDAFLDFMTRESTDTD 531
G + F FL M R+ DTD
Sbjct: 59 GNGTIDFPEFLTMMARKMKDTD 80
>pdb|1AJ4|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 1
Structure
Length = 161
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 54/102 (52%), Gaps = 16/102 (15%)
Query: 422 VGWEQLLTSINRNINEVENQILTRDSKGITQEQLNEFRASFNHFDKNRTGRLAPEEFKSC 481
V +++ L + R++ + DSKG T+E+L++ F FDKN G + EE K
Sbjct: 72 VDFDEFLVMMVRSMKD--------DSKGKTEEELSDL---FRMFDKNADGYIDLEELKIM 120
Query: 482 LVSLGYSIGKDRQGEIDFQRILAVVDPNSTGYVHFDAFLDFM 523
L + G +I +D D + ++ D N+ G + +D FL+FM
Sbjct: 121 LQATGETITED-----DIEELMKDGDKNNDGRIDYDEFLEFM 157
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 48/98 (48%), Gaps = 9/98 (9%)
Query: 450 ITQEQLNEFRASFNHFDKN-RTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDP 508
+T+EQ NEF+A+F+ F G ++ +E + LG + + Q ++ VD
Sbjct: 12 LTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEE-----LQEMIDEVDE 66
Query: 509 NSTGYVHFDAFLDFMTRESTDTD---TAEQVIDSFRIL 543
+ +G V FD FL M R D T E++ D FR+
Sbjct: 67 DGSGTVDFDEFLVMMVRSMKDDSKGKTEEELSDLFRMF 104
>pdb|3CTN|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 30
Structures
Length = 76
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 44/78 (56%), Gaps = 8/78 (10%)
Query: 446 DSKGITQEQLNEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAV 505
DSKG T+E+L++ F FDKN G + EE K L + G +I +D D + ++
Sbjct: 3 DSKGKTEEELSDL---FRMFDKNADGYIDLEELKIMLQATGETITED-----DIEELMKD 54
Query: 506 VDPNSTGYVHFDAFLDFM 523
D N+ G + +D FL+FM
Sbjct: 55 GDKNNDGRIDYDEFLEFM 72
>pdb|2RO8|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 N-Terminal Domain
Length = 79
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 45/81 (55%), Gaps = 5/81 (6%)
Query: 450 ITQEQLNEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPN 509
+T EQ++EF+ +F+ FDK+ G + +E + + SLG + E + Q ++ VD +
Sbjct: 4 LTDEQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQN-----PTEAELQDMINEVDAD 58
Query: 510 STGYVHFDAFLDFMTRESTDT 530
G + F FL+ M R+ DT
Sbjct: 59 GNGTIDFPEFLNLMARKMKDT 79
>pdb|3UCT|A Chain A, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
pdb|3UCT|B Chain B, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
pdb|3UCW|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|B Chain B, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|C Chain C, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|D Chain D, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCY|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
Length = 79
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 44/81 (54%), Gaps = 5/81 (6%)
Query: 450 ITQEQLNEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPN 509
+T+EQ+ EF+ +F+ FDK+ G + +E + + SLG + E + Q ++ VD +
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQN-----PTEAELQDMINEVDAD 58
Query: 510 STGYVHFDAFLDFMTRESTDT 530
G + F FL M R+ DT
Sbjct: 59 GNGTIDFPEFLTMMARKMKDT 79
>pdb|2JOJ|A Chain A, Nmr Solution Structure Of N-Terminal Domain Of Euplotes
Octocarinatus Centrin
Length = 77
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 5/82 (6%)
Query: 450 ITQEQLNEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPN 509
+++EQ E + +F+ FD N+TG + E K + +LG+ + K E ++ D
Sbjct: 1 LSEEQKQEIKEAFDLFDTNKTGSIDYHELKVAMRALGFDVKKPEILE-----LMNEYDRE 55
Query: 510 STGYVHFDAFLDFMTRESTDTD 531
GY+ FD FLD MT + + D
Sbjct: 56 GNGYIGFDDFLDIMTEKIKNRD 77
>pdb|1SW8|A Chain A, Solution Structure Of The N-Terminal Domain Of Human N60d
Calmodulin Refined With Paramagnetism Based Strategy
Length = 79
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 44/81 (54%), Gaps = 5/81 (6%)
Query: 450 ITQEQLNEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPN 509
+T+EQ+ EF+ +F+ FDK+ G + +E + + SLG + E + Q ++ VD +
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQN-----PTEAELQDMINEVDAD 58
Query: 510 STGYVHFDAFLDFMTRESTDT 530
G + F FL M R+ DT
Sbjct: 59 GDGTIDFPEFLTMMARKMKDT 79
>pdb|1DTL|A Chain A, Crystal Structure Of Calcium-Saturated (3ca2+) Cardiac
Troponin C Complexed With The Calcium Sensitizer
Bepridil At 2.15 A Resolution
pdb|1J1D|A Chain A, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1D|D Chain D, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|A Chain A, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|D Chain D, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
Length = 161
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 54/102 (52%), Gaps = 16/102 (15%)
Query: 422 VGWEQLLTSINRNINEVENQILTRDSKGITQEQLNEFRASFNHFDKNRTGRLAPEEFKSC 481
V +++ L + R++ + DSKG ++E+L++ F FDKN G + EE K
Sbjct: 72 VDFDEFLVMMVRSMKD--------DSKGKSEEELSDL---FRMFDKNADGYIDLEELKIM 120
Query: 482 LVSLGYSIGKDRQGEIDFQRILAVVDPNSTGYVHFDAFLDFM 523
L + G +I +D D + ++ D N+ G + +D FL+FM
Sbjct: 121 LQATGETITED-----DIEELMKDGDKNNDGRIDYDEFLEFM 157
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 48/98 (48%), Gaps = 9/98 (9%)
Query: 450 ITQEQLNEFRASFNHFDKN-RTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDP 508
+T+EQ NEF+A+F+ F G ++ +E + LG + + Q ++ VD
Sbjct: 12 LTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEE-----LQEMIDEVDE 66
Query: 509 NSTGYVHFDAFLDFMTRESTDTD---TAEQVIDSFRIL 543
+ +G V FD FL M R D + E++ D FR+
Sbjct: 67 DGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMF 104
>pdb|1U4Q|A Chain A, Crystal Structure Of Repeats 15, 16 And 17 Of Chicken
Brain Alpha Spectrin
pdb|1U4Q|B Chain B, Crystal Structure Of Repeats 15, 16 And 17 Of Chicken
Brain Alpha Spectrin
Length = 322
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 50/103 (48%), Gaps = 1/103 (0%)
Query: 104 QKFKHKADIHEDWTRGKEEMLQSSDFRQCKLNELKALKKKHEAFESDLAAHQDRVEQIAA 163
Q+F + E W K ++ S D+ L ++ L KKHEAFE+D H+DRV + A
Sbjct: 218 QQFVANVEEEEAWINEKMTLVASEDYGDT-LAAIQGLLKKHEAFETDFTVHKDRVNDVCA 276
Query: 164 IAQELNTLEYHDSVSVNARCQRICDQWDHLGALTQQRRHALDE 206
++L H ++ A+ + + + L QR+ LDE
Sbjct: 277 NGEDLIKKNNHHVENITAKMKGLKGKVSDLEKAAAQRKAKLDE 319
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/253 (20%), Positives = 105/253 (41%), Gaps = 28/253 (11%)
Query: 116 WTRGKEEMLQSSDFRQCKLNELKALKKKHEAFESDLAAHQDRVEQIAAIAQELNTLEYHD 175
W E +L S D+ + L + L KKH+ E+D++AH+DR++ + + A L T D
Sbjct: 18 WLSEVEALLASEDYGK-DLASVNNLLKKHQLLEADISAHEDRLKDLNSQADSLMTSSAFD 76
Query: 176 SVSVNARCQRICDQWDHLGALTQQRRHALDEAEKILEKIDILHLEFAKRAAPFNNWLDGT 235
+ V + + I ++ + ++ RR L+E+ + LH +F + +W+
Sbjct: 77 TSQVKDKRETINGRFQRIKSMAAARRAKLNESHR-------LH-QFFRDMDDEESWIKEK 128
Query: 236 REDLVDMFIVHTMEEIQGLIDAHSQFKATLGEADKEYNSIVNLVREV--ESTVQQYQIPG 293
+ + + +Q L H + +A L + +++ +++ ++T+ + +I
Sbjct: 129 KLLVSSEDYGRDLTGVQNLRKKHKRLEAELAAHEPAIQGVLDTGKKLSDDNTIGKEEIQQ 188
Query: 294 GLENPYTALTANDLTKKWTDVRKLVPQRDTTLQAELRKQQNNETLRRQFAEKANQVGPWI 353
L W ++++L R L+ L Q QF + WI
Sbjct: 189 RLAQ---------FVDHWKELKQLAAARGQRLEESLEYQ--------QFVANVEEEEAWI 231
Query: 354 ERQMDAVTSIGMG 366
+M V S G
Sbjct: 232 NEKMTLVASEDYG 244
>pdb|1CUN|A Chain A, Crystal Structure Of Repeats 16 And 17 Of Chicken Brain
Alpha Spectrin
pdb|1CUN|B Chain B, Crystal Structure Of Repeats 16 And 17 Of Chicken Brain
Alpha Spectrin
pdb|1CUN|C Chain C, Crystal Structure Of Repeats 16 And 17 Of Chicken Brain
Alpha Spectrin
Length = 213
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 50/103 (48%), Gaps = 1/103 (0%)
Query: 104 QKFKHKADIHEDWTRGKEEMLQSSDFRQCKLNELKALKKKHEAFESDLAAHQDRVEQIAA 163
Q+F + E W K ++ S D+ L ++ L KKHEAFE+D H+DRV + A
Sbjct: 109 QQFVANVEEEEAWINEKMTLVASEDYGDT-LAAIQGLLKKHEAFETDFTVHKDRVNDVCA 167
Query: 164 IAQELNTLEYHDSVSVNARCQRICDQWDHLGALTQQRRHALDE 206
++L H ++ A+ + + + L QR+ LDE
Sbjct: 168 NGEDLIKKNNHHVENITAKMKGLKGKVSDLEKAAAQRKAKLDE 210
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 65/151 (43%), Gaps = 9/151 (5%)
Query: 111 DIHEDWTRGKEEMLQSSDFRQCKLNELKALKKKHEAFESDLAAHQDRVEQIAAIAQELNT 170
D E W + K+ ++ S D+ + L ++ L+KKH+ E++LAAH+ ++ + ++L+
Sbjct: 10 DDEESWIKEKKLLVSSEDYGR-DLTGVQNLRKKHKRLEAELAAHEPAIQSVLDTGKKLSD 68
Query: 171 LEYHDSVSVNARCQRICDQWDHLGALTQQRRHALDEAEKILEKIDILHLEFAKRAAPFNN 230
+ R + D W L L R L+E+ + + +F
Sbjct: 69 DNTIGKEEIQQRLAQFVDHWKELKQLAAARGQRLEES--------LEYQQFVANVEEEEA 120
Query: 231 WLDGTREDLVDMFIVHTMEEIQGLIDAHSQF 261
W++ + T+ IQGL+ H F
Sbjct: 121 WINEKMTLVASEDYGDTLAAIQGLLKKHEAF 151
>pdb|2LAN|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 N-Domain With Rdc
pdb|2LAP|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain With Rdc
Length = 167
Score = 46.2 bits (108), Expect = 6e-05, Method: Composition-based stats.
Identities = 26/103 (25%), Positives = 53/103 (51%), Gaps = 9/103 (8%)
Query: 443 LTRDSKGITQEQLNEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRI 502
L+R + + E++ E R +F FDK++ G + + +C+ ++GY E++ +
Sbjct: 12 LSRKDRSLRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGY-----MPTEMELIEL 66
Query: 503 LAVVDPNSTGYVHFDAFLDFM----TRESTDTDTAEQVIDSFR 541
++ N G+V FD F++ M E+ D +++ D+FR
Sbjct: 67 SQQINMNLGGHVDFDDFVELMGPKLLAETADMIGVKELRDAFR 109
>pdb|1ZMZ|A Chain A, Solution Structure Of The N-Terminal Domain (M1-S98) Of
Human Centrin 2
Length = 98
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 45/77 (58%), Gaps = 5/77 (6%)
Query: 450 ITQEQLNEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPN 509
+T+EQ E R +F+ FD + TG + +E K + +LG+ K+ + +++++ +D
Sbjct: 25 LTEEQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKE-----EIKKMISEIDKE 79
Query: 510 STGYVHFDAFLDFMTRE 526
TG ++F FL MT++
Sbjct: 80 GTGKMNFGDFLTVMTQK 96
>pdb|2LQC|A Chain A, Nmr Solution Structure Of A Ca2+-Calmodulin With A Binding
Motif (Nscate) Peptide From The N-Terminal Cytoplasmic
Domain Of The L-Type Voltage-Cated Calcium Channel
Alpha1c Subunit
Length = 77
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 5/76 (6%)
Query: 450 ITQEQLNEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPN 509
+T+EQ+ EF+ +F+ FDK+ G + +E + + SLG + E + Q ++ VD +
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQN-----PTEAELQDMINEVDAD 58
Query: 510 STGYVHFDAFLDFMTR 525
G + F FL M R
Sbjct: 59 GNGTIDFPEFLTMMAR 74
>pdb|1F70|A Chain A, Refined Solution Structure Of Calmodulin N-Terminal Domain
pdb|2PQ3|A Chain A, N-Terminal Calmodulin Zn-Trapped Intermediate
pdb|2KUG|A Chain A, Halothane Binds To Druggable Sites In Calcium-Calmodulin:
Solution Structure Of Halothane-Cam N-Terminal Domain
Length = 76
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 5/76 (6%)
Query: 450 ITQEQLNEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPN 509
+T+EQ+ EF+ +F+ FDK+ G + +E + + SLG + E + Q ++ VD +
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQN-----PTEAELQDMINEVDAD 58
Query: 510 STGYVHFDAFLDFMTR 525
G + F FL M R
Sbjct: 59 GNGTIDFPEFLTMMAR 74
>pdb|3B32|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-75
Length = 75
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 5/76 (6%)
Query: 450 ITQEQLNEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPN 509
+T+EQ+ EF+ +F+ FDK+ G + +E + + SLG + E + Q ++ VD +
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQN-----PTEAELQDMINEVDAD 58
Query: 510 STGYVHFDAFLDFMTR 525
G + F FL M R
Sbjct: 59 GNGTIDFPEFLTMMAR 74
>pdb|1AK8|A Chain A, Nmr Solution Structure Of Cerium-Loaded Calmodulin Amino-
Terminal Domain (Ce2-Tr1c), 23 Structures
Length = 76
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 5/76 (6%)
Query: 450 ITQEQLNEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPN 509
+T+EQ+ EF+ +F+ FDK+ G + +E + + SLG + E + Q ++ VD +
Sbjct: 5 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQN-----PTEAELQDMINEVDAD 59
Query: 510 STGYVHFDAFLDFMTR 525
G + F FL M R
Sbjct: 60 GNGTIDFPEFLTMMAR 75
>pdb|1YDI|B Chain B, Human Vinculin Head Domain (Vh1, 1-258) In Complex With
Human Alpha-Actinin's Vinculin-Binding Site (Residues
731- 760)
Length = 24
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 21/24 (87%), Positives = 22/24 (91%)
Query: 422 VGWEQLLTSINRNINEVENQILTR 445
VGWEQLLT+I R INEVENQILTR
Sbjct: 1 VGWEQLLTTIARTINEVENQILTR 24
>pdb|1J7O|A Chain A, Solution Structure Of Calcium-calmodulin N-terminal Domain
Length = 76
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 5/76 (6%)
Query: 450 ITQEQLNEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPN 509
+T+EQ+ EF+ +F+ FDK+ G + +E + + SLG + E + Q ++ VD +
Sbjct: 4 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQN-----PTEAELQDMINEVDAD 58
Query: 510 STGYVHFDAFLDFMTR 525
G + F FL M R
Sbjct: 59 GNGTIDFPEFLTMMAR 74
>pdb|1LA0|A Chain A, Solution Structure Of Calcium Saturated Cardiac Troponin C
In The Troponin C-Troponin I Complex
Length = 161
Score = 45.4 bits (106), Expect = 9e-05, Method: Composition-based stats.
Identities = 29/78 (37%), Positives = 44/78 (56%), Gaps = 8/78 (10%)
Query: 446 DSKGITQEQLNEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAV 505
DSKG T+E+L++ F FDKN G + EE K L + G +I +D D + ++
Sbjct: 88 DSKGKTEEELSDL---FRMFDKNADGYIDLEELKIMLQATGETITED-----DIEELMKD 139
Query: 506 VDPNSTGYVHFDAFLDFM 523
D N+ G + +D FL+FM
Sbjct: 140 GDKNNDGRIDYDEFLEFM 157
Score = 37.7 bits (86), Expect = 0.020, Method: Composition-based stats.
Identities = 33/112 (29%), Positives = 57/112 (50%), Gaps = 10/112 (8%)
Query: 450 ITQEQLNEFRASFNHFDKN-RTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDP 508
+T+EQ NEF+A+F+ F G ++ +E + LG + + + Q ++ VD
Sbjct: 12 LTEEQKNEFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPE-----ELQEMIDEVDE 66
Query: 509 NSTGYVHFDAFLDFMTR---ESTDTDTAEQVIDSFRILAGDKP-YILPDELR 556
+ +G V FD FL M R + + T E++ D FR+ + YI +EL+
Sbjct: 67 DGSGTVDFDEFLVMMVRCMKDDSKGKTEEELSDLFRMFDKNADGYIDLEELK 118
>pdb|1A2X|A Chain A, Complex Of Troponin C With A 47 Residue (1-47) Fragment Of
Troponin I
Length = 159
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 53/97 (54%), Gaps = 8/97 (8%)
Query: 450 ITQEQLNEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPN 509
+++E + EF+A+F+ FD + G ++ +E + + LG + K+ E+D I+ VD +
Sbjct: 11 LSEEMIAEFKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKE---ELD--AIIEEVDED 65
Query: 510 STGYVHFDAFLDFMTR---ESTDTDTAEQVIDSFRIL 543
+G + F+ FL M R E + E++ + FRI
Sbjct: 66 GSGTIDFEEFLVMMVRQMKEDAKGKSEEELAECFRIF 102
Score = 35.4 bits (80), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 46/102 (45%), Gaps = 16/102 (15%)
Query: 422 VGWEQLLTSINRNINEVENQILTRDSKGITQEQLNEFRASFNHFDKNRTGRLAPEEFKSC 481
+ +E+ L + R + E D+KG ++E+L E F FD+N G + EE
Sbjct: 70 IDFEEFLVMMVRQMKE--------DAKGKSEEELAE---CFRIFDRNADGYIDAEELAEI 118
Query: 482 LVSLGYSIGKDRQGEIDFQRILAVVDPNSTGYVHFDAFLDFM 523
+ G + + + + ++ D N+ G + FD FL M
Sbjct: 119 FRASGEHVTDE-----EIESLMKDGDKNNDGRIDFDEFLKMM 155
>pdb|1FI5|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac Troponin
C Bound To The N Terminal Domain Of Cardiac Troponin I.
pdb|1SBJ|A Chain A, Nmr Structure Of The Mg2+-Loaded C Terminal Domain Of
Cardiac Troponin C Bound To The N Terminal Domain Of
Cardiac Troponin I
pdb|1SCV|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac Troponin
C Bound To The N Terminal Domain Of Cardiac Troponin I
Length = 81
Score = 44.7 bits (104), Expect = 1e-04, Method: Composition-based stats.
Identities = 29/78 (37%), Positives = 44/78 (56%), Gaps = 8/78 (10%)
Query: 446 DSKGITQEQLNEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAV 505
DSKG T+E+L++ F FDKN G + EE K L + G +I +D D + ++
Sbjct: 8 DSKGKTEEELSDL---FRMFDKNADGYIDLEELKIMLQATGETITED-----DIEELMKD 59
Query: 506 VDPNSTGYVHFDAFLDFM 523
D N+ G + +D FL+FM
Sbjct: 60 GDKNNDGRIDYDEFLEFM 77
>pdb|2I08|A Chain A, Solvation Effect In Conformational Changes Of Ef-Hand
Proteins: X-Ray Structure Of Ca2+-Saturated Double
Mutant Q41l-K75i Of N-Domain Of Calmodulin
Length = 78
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 41/76 (53%), Gaps = 5/76 (6%)
Query: 450 ITQEQLNEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPN 509
+T+EQ+ EF+ +F+ +DK+ G + +E + + SLG + E + Q ++ VD +
Sbjct: 4 LTEEQIAEFKEAFSLYDKDGDGTITTKELGTVMRSLGLN-----PTEAELQDMINEVDAD 58
Query: 510 STGYVHFDAFLDFMTR 525
G + F FL M R
Sbjct: 59 GNGTIDFPEFLTMMAR 74
>pdb|2AMI|A Chain A, Solution Structure Of The Calcium-Loaded N-Terminal Sensor
Domain Of Centrin
Length = 96
Score = 44.3 bits (103), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/84 (29%), Positives = 48/84 (57%), Gaps = 9/84 (10%)
Query: 445 RDSK----GITQEQLNEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQ 500
RD K G+T+EQ E R +F+ FD + +G + +E K + +LG+ K+ + +
Sbjct: 15 RDQKKGRVGLTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKE-----EIK 69
Query: 501 RILAVVDPNSTGYVHFDAFLDFMT 524
++++ +D + +G + F+ FL MT
Sbjct: 70 KMISEIDKDGSGTIDFEEFLTMMT 93
>pdb|2GGM|A Chain A, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
pdb|2GGM|B Chain B, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
Length = 172
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 53/97 (54%), Gaps = 5/97 (5%)
Query: 450 ITQEQLNEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPN 509
+T+EQ E R +F+ FD + TG + +E K +LG+ K+ ++ ++ +D
Sbjct: 25 LTEEQKQEIREAFDLFDADGTGTIDVKELKVAXRALGFEPKKEEI-----KKXISEIDKE 79
Query: 510 STGYVHFDAFLDFMTRESTDTDTAEQVIDSFRILAGD 546
TG +F FL T++ ++ DT E+++ +F++ D
Sbjct: 80 GTGKXNFGDFLTVXTQKXSEKDTKEEILKAFKLFDDD 116
>pdb|1TCF|A Chain A, Crystal Structure Of Calcium-Saturated Rabbit Skeletal
Troponin C
pdb|1TN4|A Chain A, Four Calcium Tnc
pdb|2TN4|A Chain A, Four Calcium Tnc
Length = 159
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 53/97 (54%), Gaps = 8/97 (8%)
Query: 450 ITQEQLNEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPN 509
+++E + EF+A+F+ FD + G ++ +E + + LG + K+ E+D I+ VD +
Sbjct: 11 LSEEMIAEFKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKE---ELD--AIIEEVDED 65
Query: 510 STGYVHFDAFLDFMTR---ESTDTDTAEQVIDSFRIL 543
+G + F+ FL M R E + E++ + FRI
Sbjct: 66 GSGTIDFEEFLVMMVRQMKEDAKGKSEEELAELFRIF 102
Score = 35.8 bits (81), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 46/102 (45%), Gaps = 16/102 (15%)
Query: 422 VGWEQLLTSINRNINEVENQILTRDSKGITQEQLNEFRASFNHFDKNRTGRLAPEEFKSC 481
+ +E+ L + R + E D+KG ++E+L E F FD+N G + EE
Sbjct: 70 IDFEEFLVMMVRQMKE--------DAKGKSEEELAEL---FRIFDRNADGYIDAEELAEI 118
Query: 482 LVSLGYSIGKDRQGEIDFQRILAVVDPNSTGYVHFDAFLDFM 523
+ G + + + + ++ D N+ G + FD FL M
Sbjct: 119 FRASGEHVTDE-----EIESLMKDGDKNNDGRIDFDEFLKMM 155
>pdb|1F54|A Chain A, Solution Structure Of The Apo N-Terminal Domain Of Yeast
Calmodulin
pdb|1F55|A Chain A, Solution Structure Of The Calcium Bound N-Terminal Domain
Of Yeast Calmodulin
Length = 77
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 41/80 (51%), Gaps = 5/80 (6%)
Query: 447 SKGITQEQLNEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVV 506
S +T+EQ+ EF+ +F FDK+ G ++ E + + SLG S E + ++ +
Sbjct: 1 SSNLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLS-----PSEAEVNDLMNEI 55
Query: 507 DPNSTGYVHFDAFLDFMTRE 526
D + + F FL M+R+
Sbjct: 56 DVDGNHQIEFSEFLALMSRQ 75
>pdb|2JT0|A Chain A, Solution Structure Of F104w Cardiac Troponin C
Length = 161
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 45/81 (55%), Gaps = 8/81 (9%)
Query: 443 LTRDSKGITQEQLNEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRI 502
+ DSKG ++E+L++ F +DKN G + +E K L + G +I +D D + +
Sbjct: 85 MKDDSKGKSEEELSDL---FRMWDKNADGYIDLDELKIMLQATGETITED-----DIEEL 136
Query: 503 LAVVDPNSTGYVHFDAFLDFM 523
+ D N+ G + +D FL+FM
Sbjct: 137 MKDGDKNNDGRIDYDEFLEFM 157
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 68/158 (43%), Gaps = 22/158 (13%)
Query: 450 ITQEQLNEFRASFNHFDKN-RTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDP 508
+T+EQ NEF+A+F+ F G ++ +E + LG + + Q ++ VD
Sbjct: 12 LTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEE-----LQEMIDEVDE 66
Query: 509 NSTGYVHFDAFLDFMTRESTDTD---TAEQVIDSFRILAGDKP-YILPDELR-------R 557
+ +G V FD FL M R D + E++ D FR+ + YI DEL+
Sbjct: 67 DGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMWDKNADGYIDLDELKIMLQATGE 126
Query: 558 ELPPDQAEYCIQRMPPYKGPNAIPGALDYQSFSTALYG 595
+ D E ++ G G +DY F + G
Sbjct: 127 TITEDDIEELMK-----DGDKNNDGRIDYDEFLEFMKG 159
>pdb|2JT3|A Chain A, Solution Structure Of F153w Cardiac Troponin C
Length = 161
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 45/81 (55%), Gaps = 8/81 (9%)
Query: 443 LTRDSKGITQEQLNEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRI 502
+ DSKG ++E+L++ F FDKN G + +E K L + G +I +D D + +
Sbjct: 85 MKDDSKGKSEEELSDL---FRMFDKNADGYIDLDELKIMLQATGETITED-----DIEEL 136
Query: 503 LAVVDPNSTGYVHFDAFLDFM 523
+ D N+ G + +D +L+FM
Sbjct: 137 MKDGDKNNDGRIDYDEWLEFM 157
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 55/112 (49%), Gaps = 10/112 (8%)
Query: 450 ITQEQLNEFRASFNHFDKN-RTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDP 508
+T+EQ NEF+A+F+ F G ++ +E + LG + + Q ++ VD
Sbjct: 12 LTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEE-----LQEMIDEVDE 66
Query: 509 NSTGYVHFDAFLDFMTRESTDTD---TAEQVIDSFRILAGDKP-YILPDELR 556
+ +G V FD FL M R D + E++ D FR+ + YI DEL+
Sbjct: 67 DGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLDELK 118
>pdb|1OZS|A Chain A, C-Domain Of Human Cardiac Troponin C In Complex With The
Inhibitory Region Of Human Cardiac Troponin I
Length = 73
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 42/76 (55%), Gaps = 8/76 (10%)
Query: 448 KGITQEQLNEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVD 507
KG ++E+L++ F FDKN G + EE K L + G +I +D D + ++ D
Sbjct: 2 KGKSEEELSDL---FRMFDKNADGYIDLEELKIMLQATGETITED-----DIEELMKDGD 53
Query: 508 PNSTGYVHFDAFLDFM 523
N+ G + +D FL+FM
Sbjct: 54 KNNDGRIDYDEFLEFM 69
>pdb|4TNC|A Chain A, Refined Structure Of Chicken Skeletal Muscle Troponin C In
The Two-Calcium State At 2-Angstroms Resolution
Length = 162
Score = 43.5 bits (101), Expect = 3e-04, Method: Composition-based stats.
Identities = 27/97 (27%), Positives = 51/97 (52%), Gaps = 8/97 (8%)
Query: 450 ITQEQLNEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPN 509
+++E + EF+A+F+ FD + G ++ +E + + LG + K+ + I+ VD +
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKE-----ELDAIIEEVDED 68
Query: 510 STGYVHFDAFLDFMTR---ESTDTDTAEQVIDSFRIL 543
+G + F+ FL M R E + E++ D FRI
Sbjct: 69 GSGTIDFEEFLVMMVRQMKEDAKGKSEEELADCFRIF 105
Score = 35.0 bits (79), Expect = 0.13, Method: Composition-based stats.
Identities = 28/102 (27%), Positives = 48/102 (47%), Gaps = 16/102 (15%)
Query: 422 VGWEQLLTSINRNINEVENQILTRDSKGITQEQLNEFRASFNHFDKNRTGRLAPEEFKSC 481
+ +E+ L + R + E D+KG ++E+L + F FDKN G + EE
Sbjct: 73 IDFEEFLVMMVRQMKE--------DAKGKSEEELAD---CFRIFDKNADGFIDIEELGEI 121
Query: 482 LVSLGYSIGKDRQGEIDFQRILAVVDPNSTGYVHFDAFLDFM 523
L + G + ++ D + ++ D N+ G + FD FL M
Sbjct: 122 LRATGEHVTEE-----DIEDLMKDSDKNNDGRIDFDEFLKMM 158
>pdb|2ROA|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 N-Terminal Domain
Length = 79
Score = 43.5 bits (101), Expect = 4e-04, Method: Composition-based stats.
Identities = 24/81 (29%), Positives = 43/81 (53%), Gaps = 5/81 (6%)
Query: 450 ITQEQLNEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPN 509
+++EQ+ +F+ +F FDK+ G + EE + + SL E + Q +++ VD +
Sbjct: 4 LSEEQIVDFKEAFGLFDKDGDGCITVEELATVIRSL-----DQNPTEEELQDMISEVDAD 58
Query: 510 STGYVHFDAFLDFMTRESTDT 530
G + FD FL M ++ DT
Sbjct: 59 GNGTIEFDEFLSLMAKKVKDT 79
>pdb|2JTZ|A Chain A, Solution Structure And Chemical Shift Assignments Of The
F104-To-5-Flurotryptophan Mutant Of Cardiac Troponin C
Length = 161
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 53/102 (51%), Gaps = 16/102 (15%)
Query: 422 VGWEQLLTSINRNINEVENQILTRDSKGITQEQLNEFRASFNHFDKNRTGRLAPEEFKSC 481
V +++ L + R++ + DSKG ++E+L++ F DKN G + +E K
Sbjct: 72 VDFDEFLVMMVRSMKD--------DSKGKSEEELSDL---FRMXDKNADGYIDLDELKIM 120
Query: 482 LVSLGYSIGKDRQGEIDFQRILAVVDPNSTGYVHFDAFLDFM 523
L + G +I +D D + ++ D N+ G + +D FL+FM
Sbjct: 121 LQATGETITED-----DIEELMKDGDKNNDGRIDYDEFLEFM 157
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 55/112 (49%), Gaps = 10/112 (8%)
Query: 450 ITQEQLNEFRASFNHFDKN-RTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDP 508
+T+EQ NEF+A+F+ F G ++ +E + LG + + Q ++ VD
Sbjct: 12 LTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEE-----LQEMIDEVDE 66
Query: 509 NSTGYVHFDAFLDFMTRESTDTD---TAEQVIDSFRILAGDKP-YILPDELR 556
+ +G V FD FL M R D + E++ D FR+ + YI DEL+
Sbjct: 67 DGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMXDKNADGYIDLDELK 118
>pdb|2JT8|A Chain A, Solution Structure Of The F153-To-5-Flurotryptophan Mutant
Of Human Cardiac Troponin C
Length = 161
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 53/102 (51%), Gaps = 16/102 (15%)
Query: 422 VGWEQLLTSINRNINEVENQILTRDSKGITQEQLNEFRASFNHFDKNRTGRLAPEEFKSC 481
V +++ L + R++ + DSKG ++E+L++ F FDKN G + +E K
Sbjct: 72 VDFDEFLVMMVRSMKD--------DSKGKSEEELSDL---FRMFDKNADGYIDLDELKIM 120
Query: 482 LVSLGYSIGKDRQGEIDFQRILAVVDPNSTGYVHFDAFLDFM 523
L + G +I +D D + ++ D N+ G + +D L+FM
Sbjct: 121 LQATGETITED-----DIEELMKDGDKNNDGRIDYDEXLEFM 157
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 55/112 (49%), Gaps = 10/112 (8%)
Query: 450 ITQEQLNEFRASFNHFDKN-RTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDP 508
+T+EQ NEF+A+F+ F G ++ +E + LG + + Q ++ VD
Sbjct: 12 LTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEE-----LQEMIDEVDE 66
Query: 509 NSTGYVHFDAFLDFMTRESTDTD---TAEQVIDSFRILAGDKP-YILPDELR 556
+ +G V FD FL M R D + E++ D FR+ + YI DEL+
Sbjct: 67 DGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLDELK 118
>pdb|1U5P|A Chain A, Crystal Structure Of Repeats 15 And 16 Of Chicken Brain
Alpha Spectrin
Length = 216
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 51/95 (53%), Gaps = 1/95 (1%)
Query: 116 WTRGKEEMLQSSDFRQCKLNELKALKKKHEAFESDLAAHQDRVEQIAAIAQELNTLEYHD 175
W E +L S D+ + L + L KKH+ E+D++AH+DR++ + + A L T D
Sbjct: 18 WLSEVEALLASEDYGK-DLASVNNLLKKHQLLEADISAHEDRLKDLNSQADSLMTSSAFD 76
Query: 176 SVSVNARCQRICDQWDHLGALTQQRRHALDEAEKI 210
+ V + + I ++ + ++ RR L+E+ ++
Sbjct: 77 TSQVKDKRETINGRFQRIKSMAAARRAKLNESHRL 111
>pdb|5TNC|A Chain A, Refined Crystal Structure Of Troponin C From Turkey
Skeletal Muscle At 2.0 Angstroms Resolution
Length = 162
Score = 42.4 bits (98), Expect = 7e-04, Method: Composition-based stats.
Identities = 27/97 (27%), Positives = 51/97 (52%), Gaps = 8/97 (8%)
Query: 450 ITQEQLNEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPN 509
+++E + EF+A+F+ FD + G ++ +E + + LG + K+ + I+ VD +
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKE-----ELDAIIEEVDED 68
Query: 510 STGYVHFDAFLDFMTR---ESTDTDTAEQVIDSFRIL 543
+G + F+ FL M R E + E++ D FRI
Sbjct: 69 GSGTIDFEEFLVMMVRQMKEDAKGKSEEELEDCFRIF 105
Score = 35.0 bits (79), Expect = 0.12, Method: Composition-based stats.
Identities = 28/102 (27%), Positives = 48/102 (47%), Gaps = 16/102 (15%)
Query: 422 VGWEQLLTSINRNINEVENQILTRDSKGITQEQLNEFRASFNHFDKNRTGRLAPEEFKSC 481
+ +E+ L + R + E D+KG ++E+L + F FDKN G + EE
Sbjct: 73 IDFEEFLVMMVRQMKE--------DAKGKSEEELED---CFRIFDKNADGFIDIEELGEI 121
Query: 482 LVSLGYSIGKDRQGEIDFQRILAVVDPNSTGYVHFDAFLDFM 523
L + G + ++ D + ++ D N+ G + FD FL M
Sbjct: 122 LRATGEHVTEE-----DIEDLMKDSDKNNDGRIDFDEFLKMM 158
>pdb|3OX6|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 42.0 bits (97), Expect = 0.001, Method: Composition-based stats.
Identities = 24/98 (24%), Positives = 50/98 (51%), Gaps = 9/98 (9%)
Query: 448 KGITQEQLNEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVD 507
+ + E++ E R +F FDK++ G + + +C+ ++GY E++ + ++
Sbjct: 3 RSLRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGY-----MPTEMELIELSQQIN 57
Query: 508 PNSTGYVHFDAFLDFM----TRESTDTDTAEQVIDSFR 541
N G+V FD F++ M E+ D +++ D+FR
Sbjct: 58 MNLGGHVDFDDFVELMGPKLLAETADMIGVKELRDAFR 95
>pdb|1TNW|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
pdb|1TNX|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
Length = 162
Score = 42.0 bits (97), Expect = 0.001, Method: Composition-based stats.
Identities = 26/97 (26%), Positives = 51/97 (52%), Gaps = 8/97 (8%)
Query: 450 ITQEQLNEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPN 509
+++E + EF+A+F+ FD + G ++ +E + + LG + K+ + I+ VD +
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKE-----ELDAIIEEVDED 68
Query: 510 STGYVHFDAFLDFMTR---ESTDTDTAEQVIDSFRIL 543
+G + F+ FL M R E + E++ + FRI
Sbjct: 69 GSGTIDFEEFLVMMVRQMKEDAKGKSEEELANCFRIF 105
Score = 33.5 bits (75), Expect = 0.33, Method: Composition-based stats.
Identities = 28/102 (27%), Positives = 47/102 (46%), Gaps = 16/102 (15%)
Query: 422 VGWEQLLTSINRNINEVENQILTRDSKGITQEQLNEFRASFNHFDKNRTGRLAPEEFKSC 481
+ +E+ L + R + E D+KG ++E+L F FDKN G + EE
Sbjct: 73 IDFEEFLVMMVRQMKE--------DAKGKSEEELAN---CFRIFDKNADGFIDIEELGEI 121
Query: 482 LVSLGYSIGKDRQGEIDFQRILAVVDPNSTGYVHFDAFLDFM 523
L + G + ++ D + ++ D N+ G + FD FL M
Sbjct: 122 LRATGEHVIEE-----DIEDLMKDSDKNNDGRIDFDEFLKMM 158
>pdb|3OX5|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 42.0 bits (97), Expect = 0.001, Method: Composition-based stats.
Identities = 24/98 (24%), Positives = 50/98 (51%), Gaps = 9/98 (9%)
Query: 448 KGITQEQLNEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVD 507
+ + E++ E R +F FDK++ G + + +C+ ++GY E++ + ++
Sbjct: 3 RSLRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGY-----MPTEMELIELSQQIN 57
Query: 508 PNSTGYVHFDAFLDFM----TRESTDTDTAEQVIDSFR 541
N G+V FD F++ M E+ D +++ D+FR
Sbjct: 58 MNLGGHVDFDDFVELMGPKLLAETADMIGVKELRDAFR 95
>pdb|1YTZ|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Activated State
pdb|1YV0|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Free State
pdb|1NCX|A Chain A, Troponin C
pdb|1NCY|A Chain A, Troponin-C, Complex With Manganese
pdb|1NCZ|A Chain A, Troponin C
pdb|1TOP|A Chain A, Structure Of Chicken Skeletal Muscle Troponin-C At 1.78
Angstroms Resolution
Length = 162
Score = 42.0 bits (97), Expect = 0.001, Method: Composition-based stats.
Identities = 26/97 (26%), Positives = 51/97 (52%), Gaps = 8/97 (8%)
Query: 450 ITQEQLNEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPN 509
+++E + EF+A+F+ FD + G ++ +E + + LG + K+ + I+ VD +
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKE-----ELDAIIEEVDED 68
Query: 510 STGYVHFDAFLDFMTR---ESTDTDTAEQVIDSFRIL 543
+G + F+ FL M R E + E++ + FRI
Sbjct: 69 GSGTIDFEEFLVMMVRQMKEDAKGKSEEELANCFRIF 105
Score = 34.3 bits (77), Expect = 0.20, Method: Composition-based stats.
Identities = 28/102 (27%), Positives = 47/102 (46%), Gaps = 16/102 (15%)
Query: 422 VGWEQLLTSINRNINEVENQILTRDSKGITQEQLNEFRASFNHFDKNRTGRLAPEEFKSC 481
+ +E+ L + R + E D+KG ++E+L F FDKN G + EE
Sbjct: 73 IDFEEFLVMMVRQMKE--------DAKGKSEEELAN---CFRIFDKNADGFIDIEELGEI 121
Query: 482 LVSLGYSIGKDRQGEIDFQRILAVVDPNSTGYVHFDAFLDFM 523
L + G + ++ D + ++ D N+ G + FD FL M
Sbjct: 122 LRATGEHVTEE-----DIEDLMKDSDKNNDGRIDFDEFLKMM 158
>pdb|2W49|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4U|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
Length = 159
Score = 41.6 bits (96), Expect = 0.001, Method: Composition-based stats.
Identities = 26/97 (26%), Positives = 51/97 (52%), Gaps = 8/97 (8%)
Query: 450 ITQEQLNEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPN 509
+++E + EF+A+F+ FD + G ++ +E + + LG + K+ + I+ VD +
Sbjct: 11 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKE-----ELDAIIEEVDED 65
Query: 510 STGYVHFDAFLDFMTR---ESTDTDTAEQVIDSFRIL 543
+G + F+ FL M R E + E++ + FRI
Sbjct: 66 GSGTIDFEEFLVMMVRQMKEDAKGKSEEELANCFRIF 102
Score = 34.3 bits (77), Expect = 0.23, Method: Composition-based stats.
Identities = 28/102 (27%), Positives = 47/102 (46%), Gaps = 16/102 (15%)
Query: 422 VGWEQLLTSINRNINEVENQILTRDSKGITQEQLNEFRASFNHFDKNRTGRLAPEEFKSC 481
+ +E+ L + R + E D+KG ++E+L F FDKN G + EE
Sbjct: 70 IDFEEFLVMMVRQMKE--------DAKGKSEEELAN---CFRIFDKNADGFIDIEELGEI 118
Query: 482 LVSLGYSIGKDRQGEIDFQRILAVVDPNSTGYVHFDAFLDFM 523
L + G + ++ D + ++ D N+ G + FD FL M
Sbjct: 119 LRATGEHVTEE-----DIEDLMKDSDKNNDGRIDFDEFLKMM 155
>pdb|2LV7|A Chain A, Solution Structure Of Ca2+-Bound Cabp7 N-Terminal Doman
Length = 100
Score = 41.2 bits (95), Expect = 0.001, Method: Composition-based stats.
Identities = 24/91 (26%), Positives = 46/91 (50%), Gaps = 5/91 (5%)
Query: 433 RNINEVENQILTRDSKGITQEQLNEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKD 492
R I V N + + I +++L E R +F FD++ G ++ +E + + SLGY
Sbjct: 13 RGIYTVPNLLSEQRPVDIPEDELEEIREAFKVFDRDGNGFISKQELGTAMRSLGY----- 67
Query: 493 RQGEIDFQRILAVVDPNSTGYVHFDAFLDFM 523
E++ + I+ +D + G V F+ F+ +
Sbjct: 68 MPNEVELEVIIQRLDMDGDGQVDFEEFVTLL 98
>pdb|2KSZ|A Chain A, The Solution Structure Of The Magnesium Bound Soybean
Calmod Isoform 4 N-Domain
Length = 76
Score = 40.4 bits (93), Expect = 0.003, Method: Composition-based stats.
Identities = 22/77 (28%), Positives = 41/77 (53%), Gaps = 5/77 (6%)
Query: 450 ITQEQLNEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPN 509
+++EQ+ +F+ +F FDK+ G + EE + + SL E + Q +++ VD +
Sbjct: 4 LSEEQIVDFKEAFGLFDKDGDGCITVEELATVIRSL-----DQNPTEEELQDMISEVDAD 58
Query: 510 STGYVHFDAFLDFMTRE 526
G + FD FL M ++
Sbjct: 59 GNGTIEFDEFLSLMAKK 75
>pdb|1IH0|A Chain A, Structure Of The C-Domain Of Human Cardiac Troponin C In
Complex With Ca2+ Sensitizer Emd 57033
Length = 71
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 40/73 (54%), Gaps = 8/73 (10%)
Query: 451 TQEQLNEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPNS 510
++E+L++ F FDKN G + EE K L + G +I +D D + ++ D N+
Sbjct: 3 SEEELSDL---FRMFDKNADGYIDLEELKIMLQATGETITED-----DIEELMKDGDKNN 54
Query: 511 TGYVHFDAFLDFM 523
G + +D FL+FM
Sbjct: 55 DGRIDYDEFLEFM 67
>pdb|1TRF|A Chain A, Solution Structure Of The Tr1c Fragment Of Skeletal Muscle
Troponin-C
Length = 76
Score = 40.0 bits (92), Expect = 0.004, Method: Composition-based stats.
Identities = 21/77 (27%), Positives = 43/77 (55%), Gaps = 5/77 (6%)
Query: 450 ITQEQLNEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPN 509
+++E + EF+A+F+ FD + G ++ +E + + LG + K+ + I+ VD +
Sbjct: 3 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKE-----ELDAIIEEVDED 57
Query: 510 STGYVHFDAFLDFMTRE 526
+G + F+ FL M R+
Sbjct: 58 GSGTIDFEEFLVMMVRQ 74
>pdb|2HF5|A Chain A, The Structure And Function Of A Novel Two-Site Calcium-
Binding Fragment Of Calmodulin
Length = 68
Score = 39.3 bits (90), Expect = 0.006, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 498 DFQRILAVVDPNSTGYVHFDAFLDFMTRESTDTDTAEQVIDSFRILAGD-KPYILPDELR 556
+ Q ++ VD + G + F FL M R+ DTD+ E++ ++FR+ D YI ELR
Sbjct: 2 ELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELR 61
>pdb|1NPQ|A Chain A, Structure Of A Rhodamine-Labeled N-Domain Troponin C
Mutant (Ca2+ Saturated) In Complex With Skeletal
Troponin I 115- 131
Length = 90
Score = 39.3 bits (90), Expect = 0.007, Method: Composition-based stats.
Identities = 21/77 (27%), Positives = 42/77 (54%), Gaps = 5/77 (6%)
Query: 450 ITQEQLNEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPN 509
+++E + EF+A+F+ FD + G ++ +E + + LG + K + I+ VD +
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTK-----CELDAIICEVDED 68
Query: 510 STGYVHFDAFLDFMTRE 526
+G + F+ FL M R+
Sbjct: 69 GSGTIDFEEFLVMMVRQ 85
>pdb|2K7B|A Chain A, Nmr Structure Of Mg2+-Bound Cabp1 N-Domain
Length = 76
Score = 39.3 bits (90), Expect = 0.007, Method: Composition-based stats.
Identities = 19/76 (25%), Positives = 40/76 (52%), Gaps = 5/76 (6%)
Query: 448 KGITQEQLNEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVD 507
+ + E++ E R +F FDK++ G + + +C+ ++GY E++ + ++
Sbjct: 2 RSLRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGY-----MPTEMELIELSQQIN 56
Query: 508 PNSTGYVHFDAFLDFM 523
N G+V FD F++ M
Sbjct: 57 MNLGGHVDFDDFVELM 72
>pdb|3I5G|B Chain B, Crystal Structure Of Rigor-Like Squid Myosin S1
pdb|3I5H|B Chain B, The Crystal Structure Of Rigor Like Squid Myosin S1 In The
Absence Of Nucleotide
pdb|3I5I|B Chain B, The Crystal Structure Of Squid Myosin S1 In The Presence
Of So4 2-
pdb|3I5F|B Chain B, Crystal Structure Of Squid Mg.Adp Myosin S1
Length = 153
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/110 (22%), Positives = 49/110 (44%), Gaps = 9/110 (8%)
Query: 450 ITQEQLNEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPN 509
++Q Q+ E + +F D++R G + E+ K SLG D L +
Sbjct: 10 LSQRQMQELKEAFTMIDQDRDGFIGMEDLKDMFSSLGRVPPDDE---------LNAMLKE 60
Query: 510 STGYVHFDAFLDFMTRESTDTDTAEQVIDSFRILAGDKPYILPDELRREL 559
G ++F AFL + + TD + + ++F + D +P++ ++L
Sbjct: 61 CPGQLNFTAFLTLFGEKVSGTDPEDALRNAFSMFDEDGQGFIPEDYLKDL 110
>pdb|1AVS|A Chain A, X-Ray Crystallographic Study Of Calcium-Saturated N-
Terminal Domain Of Troponin C
pdb|1AVS|B Chain B, X-Ray Crystallographic Study Of Calcium-Saturated N-
Terminal Domain Of Troponin C
pdb|1BLQ|A Chain A, Structure And Interaction Site Of The Regulatory Domain Of
Troponin-C When Complexed With The 96-148 Region Of
Troponin-I, Nmr, 29 Structures
pdb|1SKT|A Chain A, Solution Structure Of Apo N-Domain Of Troponin C, Nmr, 40
Structures
pdb|1TNP|A Chain A, Structures Of The Apo And Calcium Troponin-C Regulatory
Domains: The Muscle Contraction Switch
pdb|1TNQ|A Chain A, Structures Of The Apo And Calcium Troponin-C Regulatory
Domains: The Muscle Contraction Switch
pdb|1ZAC|A Chain A, N-Domain Of Troponin C From Chicken Skeletal Muscle, Nmr,
Minimized Average Structure
Length = 90
Score = 38.5 bits (88), Expect = 0.010, Method: Composition-based stats.
Identities = 21/77 (27%), Positives = 43/77 (55%), Gaps = 5/77 (6%)
Query: 450 ITQEQLNEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPN 509
+++E + EF+A+F+ FD + G ++ +E + + LG + K+ + I+ VD +
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKE-----ELDAIIEEVDED 68
Query: 510 STGYVHFDAFLDFMTRE 526
+G + F+ FL M R+
Sbjct: 69 GSGTIDFEEFLVMMVRQ 85
>pdb|2CTN|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 30
Structures
Length = 89
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 6/81 (7%)
Query: 450 ITQEQLNEFRASFNHFDKN-RTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDP 508
+T+EQ NEF+A+F+ F G ++ +E + LG + + + Q ++ VD
Sbjct: 12 LTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPE-----ELQEMIDEVDE 66
Query: 509 NSTGYVHFDAFLDFMTRESTD 529
+ +G V FD FL M R D
Sbjct: 67 DGSGTVDFDEFLVMMVRSMKD 87
>pdb|1WRK|A Chain A, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Orthrombic Crystal Form)
pdb|1WRK|B Chain B, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Orthrombic Crystal Form)
pdb|1WRL|A Chain A, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|B Chain B, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|C Chain C, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|D Chain D, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|E Chain E, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|F Chain F, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
Length = 88
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 6/81 (7%)
Query: 450 ITQEQLNEFRASFNHFDKN-RTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDP 508
+T+EQ NEF+A+F+ F G ++ +E + LG + + + Q ++ VD
Sbjct: 12 LTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPE-----ELQEMIDEVDE 66
Query: 509 NSTGYVHFDAFLDFMTRESTD 529
+ +G V FD FL M R D
Sbjct: 67 DGSGTVDFDEFLVMMVRSMKD 87
>pdb|3PM8|A Chain A, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
pdb|3PM8|B Chain B, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
Length = 197
Score = 38.1 bits (87), Expect = 0.015, Method: Composition-based stats.
Identities = 23/85 (27%), Positives = 43/85 (50%), Gaps = 5/85 (5%)
Query: 436 NEVENQILTRDSKGITQEQLNEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQG 495
NE++ LT +K + ++N R F D + +G L+ +E L +GY ++
Sbjct: 37 NELKKIALTIIAKHLCDVEINNLRNIFIALDVDNSGTLSSQEILDGLKKIGY-----QKI 91
Query: 496 EIDFQRILAVVDPNSTGYVHFDAFL 520
D ++L +D N++G +H+ FL
Sbjct: 92 PPDIHQVLRDIDSNASGQIHYTDFL 116
>pdb|2OPO|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|C Chain C, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|D Chain D, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
Length = 86
Score = 37.7 bits (86), Expect = 0.019, Method: Composition-based stats.
Identities = 20/61 (32%), Positives = 33/61 (54%), Gaps = 6/61 (9%)
Query: 462 FNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPNSTGYVHFDAFLD 521
F FD N G+++ E L +LG S+ D + +R++A +D + G++ FD F D
Sbjct: 17 FKRFDTNGDGKISSSELGDALKTLG-SVTPD-----EVRRMMAEIDTDGDGFISFDEFTD 70
Query: 522 F 522
F
Sbjct: 71 F 71
>pdb|2BL0|C Chain C, Physarum Polycephalum Myosin Ii Regulatory Domain
Length = 142
Score = 37.4 bits (85), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 41/100 (41%), Gaps = 5/100 (5%)
Query: 453 EQLNEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPNSTG 512
+Q++EF+ +F FD RTG + E ++ L G R F + D G
Sbjct: 3 DQVSEFKEAFELFDSERTGFITKEGLQTVLKQFGV-----RVEPAAFNEMFNEADATGNG 57
Query: 513 YVHFDAFLDFMTRESTDTDTAEQVIDSFRILAGDKPYILP 552
+ F FL M R T + + + +FR + +P
Sbjct: 58 KIQFPEFLSMMGRRMKQTTSEDILRQAFRTFDPEGTGYIP 97
>pdb|1AJ3|A Chain A, Solution Structure Of The Spectrin Repeat, Nmr, 20
Structures
Length = 110
Score = 37.0 bits (84), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 46/95 (48%), Gaps = 1/95 (1%)
Query: 111 DIHEDWTRGKEEMLQSSDFRQCKLNELKALKKKHEAFESDLAAHQDRVEQIAAIAQELNT 170
D E W + K+ ++ S D+ + L ++ L+KKH+ E++LAAH+ ++ + ++L+
Sbjct: 17 DDEESWIKEKKLLVSSEDYGR-DLTGVQNLRKKHKRLEAELAAHEPAIQGVLDTGKKLSD 75
Query: 171 LEYHDSVSVNARCQRICDQWDHLGALTQQRRHALD 205
+ R + D W L L R L+
Sbjct: 76 DNTIGKEEIQQRLAQFVDHWKELKQLAAARGQRLE 110
>pdb|2KDH|A Chain A, The Solution Structure Of Human Cardiac Troponin C In
Complex With The Green Tea Polyphenol; (-)-
Epigallocatechin-3-Gallate
pdb|2L98|A Chain A, Structure Of Trans-Resveratrol In Complex With The Cardiac
Regulatory Protein Troponin C
Length = 72
Score = 37.0 bits (84), Expect = 0.034, Method: Composition-based stats.
Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 8/75 (10%)
Query: 449 GITQEQLNEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDP 508
G ++E+L++ F FDKN G + +E K L + G +I +D D + ++ D
Sbjct: 2 GKSEEELSDL---FRMFDKNADGYIDLDELKIMLQATGETITED-----DIEELMKDGDK 53
Query: 509 NSTGYVHFDAFLDFM 523
N+ G + +D FL+FM
Sbjct: 54 NNDGRIDYDEFLEFM 68
>pdb|1SMG|A Chain A, Calcium-Bound E41a Mutant Of The N-Domain Of Chicken
Troponin C, Nmr, 40 Structures
Length = 90
Score = 37.0 bits (84), Expect = 0.034, Method: Composition-based stats.
Identities = 20/77 (25%), Positives = 42/77 (54%), Gaps = 5/77 (6%)
Query: 450 ITQEQLNEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPN 509
+++E + EF+A+F+ FD + G ++ + + + LG + K+ + I+ VD +
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKALGTVMRMLGQNPTKE-----ELDAIIEEVDED 68
Query: 510 STGYVHFDAFLDFMTRE 526
+G + F+ FL M R+
Sbjct: 69 GSGTIDFEEFLVMMVRQ 85
>pdb|4GJG|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C Mutant D2n/v28i/l29q/g30d (niqd) In
Complex With Cadmium
Length = 89
Score = 36.2 bits (82), Expect = 0.049, Method: Composition-based stats.
Identities = 27/91 (29%), Positives = 46/91 (50%), Gaps = 6/91 (6%)
Query: 440 NQILTRDSKGITQEQLNEFRASFNHFDKN-RTGRLAPEEFKSCLVSLGYSIGKDRQGEID 498
N I + +T+EQ NEF+A+F+ F ++ G ++ +E + LG + + +
Sbjct: 2 NDIYKAAVEQLTEEQKNEFKAAFDIFIQDAEDGCISTKELGKVMRMLGQNPTPE-----E 56
Query: 499 FQRILAVVDPNSTGYVHFDAFLDFMTRESTD 529
Q ++ VD + +G V FD FL M R D
Sbjct: 57 LQEMIDEVDEDGSGTVDFDEFLVMMVRCMKD 87
>pdb|1K9U|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
pdb|1K9U|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
Length = 78
Score = 36.2 bits (82), Expect = 0.055, Method: Composition-based stats.
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 6/61 (9%)
Query: 462 FNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPNSTGYVHFDAFLD 521
F FD N G+++ E L +LG S D + QR++A +D + G++ F+ F+
Sbjct: 9 FKRFDTNGDGKISLSELTDALRTLG-STSAD-----EVQRMMAEIDTDGDGFIDFNEFIS 62
Query: 522 F 522
F
Sbjct: 63 F 63
>pdb|2LVI|A Chain A, Solution Structure Of Apo-phl P 7
pdb|2LVJ|A Chain A, Solution Structure Of Hemi-mg-bound Phl P 7
pdb|2LVK|A Chain A, Solution Structure Of Ca-bound Phl P 7
Length = 77
Score = 36.2 bits (82), Expect = 0.059, Method: Composition-based stats.
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 6/61 (9%)
Query: 462 FNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPNSTGYVHFDAFLD 521
F FD N G+++ E L +LG S D + QR++A +D + G++ F+ F+
Sbjct: 8 FKRFDTNGDGKISLSELTDALRTLG-STSAD-----EVQRMMAEIDTDGDGFIDFNEFIS 61
Query: 522 F 522
F
Sbjct: 62 F 62
>pdb|3A8R|A Chain A, The Structure Of The N-Terminal Regulatory Domain Of A
Plant Nadph Oxidase
pdb|3A8R|B Chain B, The Structure Of The N-Terminal Regulatory Domain Of A
Plant Nadph Oxidase
Length = 179
Score = 35.8 bits (81), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 48/103 (46%), Gaps = 14/103 (13%)
Query: 426 QLLTSINRNINEVENQILTRDSKGITQEQL------NEFRASFNHFDKNRTGRLAPEEFK 479
Q+ S+ R V+ Q+LT+D EQL N R F+ DKN GRL EE K
Sbjct: 63 QMFDSLARKRGIVK-QVLTKDELKDFYEQLTDQGFDNRLRTFFDMVDKNADGRLTAEEVK 121
Query: 480 SCLVSLGYSIG-----KDRQGEIDFQRILAVVDPNSTGYVHFD 517
+++L S K+R E I+ +DP + GY+ +
Sbjct: 122 E-IIALSASANKLSKIKERADEYT-ALIMEELDPTNLGYIEME 162
>pdb|1R2U|A Chain A, Nmr Structure Of The N Domain Of Trout Cardiac Troponin C
At 30 C
pdb|1R6P|A Chain A, Nmr Structure Of The N-Terminal Domain Of Trout Cardiac
Troponin C At 7 C
Length = 89
Score = 35.8 bits (81), Expect = 0.071, Method: Composition-based stats.
Identities = 27/91 (29%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 440 NQILTRDSKGITQEQLNEFRASFNHFDKN-RTGRLAPEEFKSCLVSLGYSIGKDRQGEID 498
N I + +T EQ NEF+A+F+ F ++ G ++ +E + LG + + +
Sbjct: 2 NDIYKAAVEQLTDEQKNEFKAAFDIFIQDAEDGCISTKELGKVMRMLGQNPTPE-----E 56
Query: 499 FQRILAVVDPNSTGYVHFDAFLDFMTRESTD 529
Q ++ VD + +G V FD FL M R D
Sbjct: 57 LQEMIDEVDEDGSGTVDFDEFLVMMVRCMKD 87
>pdb|2KFX|T Chain T, Structure Of The N-Terminal Domain Of Human Cardiac
Troponin C Bound To Calcium Ion And To The Inhibitor W7
Length = 89
Score = 35.8 bits (81), Expect = 0.074, Method: Composition-based stats.
Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 6/81 (7%)
Query: 450 ITQEQLNEFRASFNHFDKN-RTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDP 508
+T+EQ NEF+A+F+ F G ++ +E + LG + + + Q ++ VD
Sbjct: 12 LTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPE-----ELQEMIDEVDE 66
Query: 509 NSTGYVHFDAFLDFMTRESTD 529
+ +G V FD FL M R D
Sbjct: 67 DGSGTVDFDEFLVMMVRSMKD 87
>pdb|4GJF|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C Mutant L29q In Complex With Cadmium
Length = 89
Score = 35.4 bits (80), Expect = 0.096, Method: Composition-based stats.
Identities = 25/81 (30%), Positives = 42/81 (51%), Gaps = 6/81 (7%)
Query: 450 ITQEQLNEFRASFNHFDKN-RTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDP 508
+T+EQ NEF+A+F+ F + G ++ +E + LG + + + Q ++ VD
Sbjct: 12 LTEEQKNEFKAAFDIFVQGAEDGCISTKELGKVMRMLGQNPTPE-----ELQEMIDEVDE 66
Query: 509 NSTGYVHFDAFLDFMTRESTD 529
+ +G V FD FL M R D
Sbjct: 67 DGSGTVDFDEFLVMMVRCMKD 87
>pdb|1JUO|A Chain A, Crystal Structure Of Calcium-Free Human Sorcin: A Member
Of The Penta-Ef-Hand Protein Family
pdb|1JUO|B Chain B, Crystal Structure Of Calcium-Free Human Sorcin: A Member
Of The Penta-Ef-Hand Protein Family
Length = 198
Score = 35.4 bits (80), Expect = 0.100, Method: Composition-based stats.
Identities = 26/93 (27%), Positives = 46/93 (49%), Gaps = 15/93 (16%)
Query: 455 LNEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPNST-GY 513
LN +R F FD +R+G + P+E + L ++G+ + Q + ++ ST G
Sbjct: 102 LNGWRQHFISFDTDRSGTVDPQELQKALTTMGFRLSP--------QAVNSIAKRYSTNGK 153
Query: 514 VHFDAFLD--FMTRESTDT----DTAEQVIDSF 540
+ FD ++ R TD+ DTA+Q + +F
Sbjct: 154 ITFDDYIACCVKLRALTDSFRRRDTAQQGVVNF 186
>pdb|2LC5|A Chain A, Calmodulin-Like Protein From Entamoeba Histolytica:
Solution Structure And Calcium-Binding Properties Of A
Partially Folded Protein
Length = 85
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 43/90 (47%), Gaps = 5/90 (5%)
Query: 443 LTRDSKGITQEQLNEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRI 502
++ K +T E+ E++ +F FDK+ +L EE + + +LG + K + E I
Sbjct: 1 MSEQKKVLTAEEQQEYKEAFQLFDKDNDNKLTAEELGTVMRALGANPTKQKISE-----I 55
Query: 503 LAVVDPNSTGYVHFDAFLDFMTRESTDTDT 532
+ D +++G + FL M + D+
Sbjct: 56 VKDYDKDNSGKFDQETFLTIMLEYGQEVDS 85
>pdb|1TCO|B Chain B, Ternary Complex Of A Calcineurin A Fragment, Calcineurin
B, Fkbp12 And The Immunosuppressant Drug Fk506
(tacrolimus)
pdb|1AUI|B Chain B, Human Calcineurin Heterodimer
pdb|1M63|B Chain B, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
pdb|1M63|F Chain F, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
Length = 169
Score = 34.3 bits (77), Expect = 0.20, Method: Composition-based stats.
Identities = 27/104 (25%), Positives = 47/104 (45%), Gaps = 10/104 (9%)
Query: 453 EQLNEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPNSTG 512
+++ F D + +G L+ EEF S + Q QR++ + D + G
Sbjct: 17 DEIKRLGKRFKKLDLDNSGSLSVEEFMSL---------PELQQNPLVQRVIDIFDTDGNG 67
Query: 513 YVHFDAFLDFMTRESTDTDTAEQVIDSFRILAGDKP-YILPDEL 555
V F F++ +++ S D +++ +FRI DK YI EL
Sbjct: 68 EVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGEL 111
>pdb|1MF8|B Chain B, Crystal Structure Of Human Calcineurin Complexed With
Cyclosporin A And Human Cyclophilin
Length = 170
Score = 34.3 bits (77), Expect = 0.20, Method: Composition-based stats.
Identities = 27/104 (25%), Positives = 47/104 (45%), Gaps = 10/104 (9%)
Query: 453 EQLNEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPNSTG 512
+++ F D + +G L+ EEF S + Q QR++ + D + G
Sbjct: 18 DEIKRLGKRFKKLDLDNSGSLSVEEFMSL---------PELQQNPLVQRVIDIFDTDGNG 68
Query: 513 YVHFDAFLDFMTRESTDTDTAEQVIDSFRILAGDKP-YILPDEL 555
V F F++ +++ S D +++ +FRI DK YI EL
Sbjct: 69 EVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGEL 112
>pdb|1MXL|C Chain C, Structure Of Cardiac Troponin C-troponin I Complex
pdb|1LXF|C Chain C, Structure Of The Regulatory N-Domain Of Human Cardiac
Troponin C In Complex With Human Cardiac Troponin-I(147-
163) And Bepridil
pdb|1AP4|A Chain A, Regulatory Domain Of Human Cardiac Troponin C In The
Calcium-Saturated State, Nmr, 40 Structures
pdb|1SPY|A Chain A, Regulatory Domain Of Human Cardiac Troponin C In The
Calcium-Free State, Nmr, 40 Structures
pdb|2KRD|C Chain C, Solution Structure Of The Regulatory Domain Of Human
Cardiac C In Complex With The Switch Region Of Cardiac
Troponin I A
pdb|2L1R|A Chain A, The Structure Of The Calcium-Sensitizer, Dfbp-O, In
Complex With The N-Domain Of Troponin C And The Switch
Region Of Troponin I
pdb|3SD6|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C In Complex With Cadmium At 1.4
Resolution.
pdb|3SWB|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C In Complex With Cadmium At 1.7 A
Resolution
pdb|4GJE|A Chain A, Crystal Structure Of The Refolded Amino-terminal Domain Of
Human Cardiac Troponin C In Complex With Cadmium
Length = 89
Score = 34.3 bits (77), Expect = 0.20, Method: Composition-based stats.
Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 6/77 (7%)
Query: 450 ITQEQLNEFRASFNHFDKN-RTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDP 508
+T+EQ NEF+A+F+ F G ++ +E + LG + + + Q ++ VD
Sbjct: 12 LTEEQKNEFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPE-----ELQEMIDEVDE 66
Query: 509 NSTGYVHFDAFLDFMTR 525
+ +G V FD FL M R
Sbjct: 67 DGSGTVDFDEFLVMMVR 83
>pdb|3LL8|B Chain B, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
pdb|3LL8|D Chain D, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
Length = 155
Score = 33.9 bits (76), Expect = 0.24, Method: Composition-based stats.
Identities = 27/104 (25%), Positives = 47/104 (45%), Gaps = 10/104 (9%)
Query: 453 EQLNEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPNSTG 512
+++ F D + +G L+ EEF S + Q QR++ + D + G
Sbjct: 3 DEIKRLGKRFKKLDLDNSGSLSVEEFMSL---------PELQQNPLVQRVIDIFDTDGNG 53
Query: 513 YVHFDAFLDFMTRESTDTDTAEQVIDSFRILAGDKP-YILPDEL 555
V F F++ +++ S D +++ +FRI DK YI EL
Sbjct: 54 EVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGEL 97
>pdb|2P6B|B Chain B, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
pdb|2P6B|D Chain D, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
Length = 156
Score = 33.9 bits (76), Expect = 0.24, Method: Composition-based stats.
Identities = 27/104 (25%), Positives = 47/104 (45%), Gaps = 10/104 (9%)
Query: 453 EQLNEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPNSTG 512
+++ F D + +G L+ EEF S + Q QR++ + D + G
Sbjct: 4 DEIKRLGKRFKKLDLDNSGSLSVEEFMSL---------PELQQNPLVQRVIDIFDTDGNG 54
Query: 513 YVHFDAFLDFMTRESTDTDTAEQVIDSFRILAGDKP-YILPDEL 555
V F F++ +++ S D +++ +FRI DK YI EL
Sbjct: 55 EVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGEL 98
>pdb|3J04|B Chain B, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
pdb|3J04|E Chain E, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
Length = 143
Score = 33.9 bits (76), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 54/140 (38%), Gaps = 45/140 (32%)
Query: 452 QEQLNEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYS--------IGKDRQGEIDFQRIL 503
Q Q+ EF+ +FN D+NR G + E+ L S+G + + + G I+F L
Sbjct: 3 QSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLASMGKNPTDEYLEGMMSEAPGPINFTMFL 62
Query: 504 --------------------AVVDPNSTGYVHFDAFLDFMTRESTDTDTAEQVIDSFRIL 543
A D ++G++H D + +T D T E+V
Sbjct: 63 TMFGEKLNGTDPEDVIRNAFACFDEEASGFIHEDHLRELLTTMG-DRFTDEEV------- 114
Query: 544 AGDKPYILPDELRRELPPDQ 563
DE+ RE P D+
Sbjct: 115 ---------DEMYREAPIDK 125
>pdb|1GJY|A Chain A, The X-Ray Structure Of The Sorcin Calcium Binding Domain
(Scbd) Provides Insight Into The Phosphorylation And
Calcium Dependent Processess
pdb|1GJY|B Chain B, The X-Ray Structure Of The Sorcin Calcium Binding Domain
(Scbd) Provides Insight Into The Phosphorylation And
Calcium Dependent Processess
pdb|1GJY|C Chain C, The X-Ray Structure Of The Sorcin Calcium Binding Domain
(Scbd) Provides Insight Into The Phosphorylation And
Calcium Dependent Processess
pdb|1GJY|D Chain D, The X-Ray Structure Of The Sorcin Calcium Binding Domain
(Scbd) Provides Insight Into The Phosphorylation And
Calcium Dependent Processess
Length = 167
Score = 33.5 bits (75), Expect = 0.31, Method: Composition-based stats.
Identities = 25/93 (26%), Positives = 46/93 (49%), Gaps = 15/93 (16%)
Query: 455 LNEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPNST-GY 513
LN +R F FD +R+G + P+E + L ++G+ + Q + ++ ST G
Sbjct: 71 LNGWRQHFISFDSDRSGTVDPQELQKALTTMGFRLNP--------QTVNSIAKRYSTSGK 122
Query: 514 VHFDAFLD--FMTRESTDT----DTAEQVIDSF 540
+ FD ++ R TD+ D+A+Q + +F
Sbjct: 123 ITFDDYIACCVKLRALTDSFRRRDSAQQGMVNF 155
>pdb|2OS8|B Chain B, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
pdb|2OTG|B Chain B, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
Length = 157
Score = 33.5 bits (75), Expect = 0.37, Method: Composition-based stats.
Identities = 22/91 (24%), Positives = 44/91 (48%), Gaps = 9/91 (9%)
Query: 450 ITQEQLNEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPN 509
+ Q+Q+ E + +F D+NR G + + K SLG + D++ L +
Sbjct: 13 LPQKQIQEMKEAFTMIDQNRDGFIDINDLKEMFSSLGRT-PDDKE--------LTAMLKE 63
Query: 510 STGYVHFDAFLDFMTRESTDTDTAEQVIDSF 540
+ G ++F FL + + + TD+ E + ++F
Sbjct: 64 APGPLNFTMFLSIFSDKLSGTDSEETIRNAF 94
>pdb|1H4B|A Chain A, Solution Structure Of The Birch Pollen Allergen Bet V 4
Length = 84
Score = 33.1 bits (74), Expect = 0.47, Method: Composition-based stats.
Identities = 19/61 (31%), Positives = 31/61 (50%), Gaps = 6/61 (9%)
Query: 462 FNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPNSTGYVHFDAFLD 521
F FD N G+++ E L +LG SI D + + ++A +D + G++ F F D
Sbjct: 15 FKRFDANGDGKISAAELGEALKTLG-SITPD-----EVKHMMAEIDTDGDGFISFQEFTD 68
Query: 522 F 522
F
Sbjct: 69 F 69
>pdb|2ROB|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 C-Terminal Domain
Length = 70
Score = 32.7 bits (73), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 14/67 (20%), Positives = 36/67 (53%), Gaps = 5/67 (7%)
Query: 457 EFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPNSTGYVHF 516
E + +F FDK++ G ++ E + +++LG + + + ++++ D + G V++
Sbjct: 5 ELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDE-----EVEQMIKEADLDGDGQVNY 59
Query: 517 DAFLDFM 523
+ F+ M
Sbjct: 60 EEFVKMM 66
>pdb|2PMY|A Chain A, Ef-Hand Domain Of Human Rasef
pdb|2PMY|B Chain B, Ef-Hand Domain Of Human Rasef
Length = 91
Score = 32.7 bits (73), Expect = 0.65, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 7/67 (10%)
Query: 453 EQLNEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPNSTG 512
E+L R+ F D NR+GRL EEF++ L + E FQR+ D + G
Sbjct: 24 EELARLRSVFAACDANRSGRLEREEFRALCTELRV---RPADAEAVFQRL----DADRDG 76
Query: 513 YVHFDAF 519
+ F F
Sbjct: 77 AITFQEF 83
>pdb|1JC2|A Chain A, Complex Of The C-Domain Of Troponin C With Residues 1-40
Of Troponin I
Length = 76
Score = 32.3 bits (72), Expect = 0.71, Method: Composition-based stats.
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 8/78 (10%)
Query: 446 DSKGITQEQLNEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAV 505
D+KG ++E+L F FDKN G + EE L + G + ++ D + ++
Sbjct: 3 DAKGKSEEELAN---CFRIFDKNADGFIDIEELGEILRATGEHVIEE-----DIEDLMKD 54
Query: 506 VDPNSTGYVHFDAFLDFM 523
D N+ G + FD FL M
Sbjct: 55 SDKNNDGRIDFDEFLKMM 72
>pdb|1YRU|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella
Pertussis In Presence Of C-Terminal Calmodulin And 1mm
Calcium Chloride
pdb|1YRT|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella
Pertussis In Presence Of C-Terminal Calmodulin
Length = 74
Score = 32.3 bits (72), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 35/68 (51%), Gaps = 5/68 (7%)
Query: 457 EFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPNSTGYVHF 516
E R +F FDK+ G ++ E + + +LG + + E+D ++ D + G V++
Sbjct: 10 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE---EVD--EMIREADIDGDGQVNY 64
Query: 517 DAFLDFMT 524
+ F+ MT
Sbjct: 65 EEFVQMMT 72
>pdb|2KN2|A Chain A, Solution Structure Of The C-Terminal Domain Of Soybean
Calmodulin Isoform 4 Fused With The Calmodulin-Binding
Domain Of Ntmkp1
Length = 92
Score = 32.3 bits (72), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 14/67 (20%), Positives = 36/67 (53%), Gaps = 5/67 (7%)
Query: 457 EFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPNSTGYVHF 516
E + +F FDK++ G ++ E + +++LG + + + ++++ D + G V++
Sbjct: 10 ELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDE-----EVEQMIKEADLDGDGQVNY 64
Query: 517 DAFLDFM 523
+ F+ M
Sbjct: 65 EEFVKMM 71
>pdb|2KGB|C Chain C, Nmr Solution Of The Regulatory Domain Cardiac
F77w-Troponin C In Complex With The Cardiac Troponin I
144-163 Switch Peptide
Length = 89
Score = 32.3 bits (72), Expect = 0.86, Method: Composition-based stats.
Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 6/77 (7%)
Query: 450 ITQEQLNEFRASFNHFDKN-RTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDP 508
+T+EQ NEF+A+F+ F G ++ +E + LG + + + Q ++ VD
Sbjct: 12 LTEEQKNEFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPE-----ELQEMIDEVDE 66
Query: 509 NSTGYVHFDAFLDFMTR 525
+ +G V FD +L M R
Sbjct: 67 DGSGTVDFDEWLVMMVR 83
>pdb|1F71|A Chain A, Refined Solution Structure Of Calmodulin C-Terminal Domain
pdb|1J7P|A Chain A, Solution Structure Of Calcium Calmodulin C-Terminal Domain
pdb|2K3S|B Chain B, Haddock-Derived Structure Of The Ch-Domain Of The
Smoothelin-Like 1 Complexed With The C-Domain Of
Apocalmodulin
pdb|2KUH|A Chain A, Halothane Binds To Druggable Sites In Calcium-Calmodulin:
Solution Structure Of Halothane-Cam C-Terminal Domain
pdb|2LLQ|A Chain A, Solution Nmr-Derived Structure Of Calmodulin C-Lobe Bound
With Er Alpha Peptide
Length = 67
Score = 32.3 bits (72), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 35/68 (51%), Gaps = 5/68 (7%)
Query: 457 EFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPNSTGYVHF 516
E R +F FDK+ G ++ E + + +LG + + E+D ++ D + G V++
Sbjct: 3 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE---EVD--EMIREADIDGDGQVNY 57
Query: 517 DAFLDFMT 524
+ F+ MT
Sbjct: 58 EEFVQMMT 65
>pdb|1CMF|A Chain A, Nmr Solution Structure Of Apo Calmodulin Carboxy-Terminal
Domain
pdb|1CMG|A Chain A, Nmr Solution Structure Of Calcium-Loaded Calmodulin
Carboxy- Terminal Domain
Length = 73
Score = 32.0 bits (71), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 35/68 (51%), Gaps = 5/68 (7%)
Query: 457 EFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPNSTGYVHF 516
E R +F FDK+ G ++ E + + +LG + + E+D ++ D + G V++
Sbjct: 9 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE---EVD--EMIREADIDGDGQVNY 63
Query: 517 DAFLDFMT 524
+ F+ MT
Sbjct: 64 EEFVQMMT 71
>pdb|2JXL|A Chain A, Solution Structure Of Cardiac N-Domain Troponin C Mutant
F77w-V82a
Length = 89
Score = 32.0 bits (71), Expect = 0.92, Method: Composition-based stats.
Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 6/77 (7%)
Query: 450 ITQEQLNEFRASFNHFDKN-RTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDP 508
+T+EQ NEF+A+F+ F G ++ +E + LG + + + Q ++ VD
Sbjct: 12 LTEEQKNEFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPE-----ELQEMIDEVDE 66
Query: 509 NSTGYVHFDAFLDFMTR 525
+ +G V FD +L M R
Sbjct: 67 DGSGTVDFDEWLVMMAR 83
>pdb|1FW4|A Chain A, Crystal Structure Of E. Coli Fragment Tr2c From Calmodulin
To 1.7 A Resolution
pdb|2LQP|A Chain A, Nmr Solution Structure Of The Ca2+-Calmodulin C-Terminal
Domain In A Complex With A Peptide (Nscate) From The
L-Type Voltage-Gated Calcium Channel Alpha1c Subunit
Length = 71
Score = 32.0 bits (71), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 35/68 (51%), Gaps = 5/68 (7%)
Query: 457 EFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPNSTGYVHF 516
E R +F FDK+ G ++ E + + +LG + + E+D ++ D + G V++
Sbjct: 7 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE---EVD--EMIREADIDGDGQVNY 61
Query: 517 DAFLDFMT 524
+ F+ MT
Sbjct: 62 EEFVQMMT 69
>pdb|1ZOT|B Chain B, Crystal Structure Analysis Of The CyaaC-Cam With Pmeapp
Length = 69
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 35/68 (51%), Gaps = 5/68 (7%)
Query: 457 EFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPNSTGYVHF 516
E R +F FDK+ G ++ E + + +LG + + E+D ++ D + G V++
Sbjct: 6 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE---EVD--EMIREADIDGDGQVNY 60
Query: 517 DAFLDFMT 524
+ F+ MT
Sbjct: 61 EEFVQMMT 68
>pdb|1M46|A Chain A, Crystal Structure Of Mlc1p Bound To Iq4 Of Myo2p, A Class
V Myosin
pdb|1M45|A Chain A, Crystal Structure Of Mlc1p Bound To Iq2 Of Myo2p, A Class
V Myosin
pdb|1N2D|A Chain A, Ternary Complex Of Mlc1p Bound To Iq2 And Iq3 Of Myo2p, A
Class V Myosin
pdb|1N2D|B Chain B, Ternary Complex Of Mlc1p Bound To Iq2 And Iq3 Of Myo2p, A
Class V Myosin
Length = 148
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 39/76 (51%), Gaps = 5/76 (6%)
Query: 451 TQEQLNEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPNS 510
T+ + +F +F FDK TG+++ + + L LG + E+D +L V+ +S
Sbjct: 78 TKAKTEDFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKL---TDAEVD--ELLKGVEVDS 132
Query: 511 TGYVHFDAFLDFMTRE 526
G + + F++ + R+
Sbjct: 133 NGEIDYKKFIEDVLRQ 148
>pdb|3LBX|B Chain B, Crystal Structure Of The Erythrocyte Spectrin
Tetramerization Domain Complex
Length = 185
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Query: 105 KFKHKADIHEDWTRGKEEMLQSSDFRQCKLNELKALKKKHEAFESDLAAHQDR 157
+F A + E W +E L S DF ++ ++ L K+HEAFE A+ +R
Sbjct: 114 QFSRDASVAEAWLIAQEPYLASGDFGHT-VDSVEKLIKRHEAFEKSTASWAER 165
>pdb|3KHE|A Chain A, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
pdb|3KHE|B Chain B, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
Length = 191
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 7/66 (10%)
Query: 460 ASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPNSTGYVHFDAF 519
A+F FD + +G++ EE LG G + + ++L D N+ G V F+ F
Sbjct: 127 AAFQQFDSDGSGKITNEE-------LGRLFGVTEVDDETWHQVLQECDKNNDGEVDFEEF 179
Query: 520 LDFMTR 525
++ M +
Sbjct: 180 VEMMQK 185
>pdb|2JC2|A Chain A, The Crystal Structure Of The Natural F112l Human Sorcin
Mutant
pdb|2JC2|B Chain B, The Crystal Structure Of The Natural F112l Human Sorcin
Mutant
pdb|2JC2|C Chain C, The Crystal Structure Of The Natural F112l Human Sorcin
Mutant
pdb|2JC2|D Chain D, The Crystal Structure Of The Natural F112l Human Sorcin
Mutant
Length = 198
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 45/93 (48%), Gaps = 15/93 (16%)
Query: 455 LNEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPNST-GY 513
LN +R F D +R+G + P+E + L ++G+ + Q + ++ ST G
Sbjct: 102 LNGWRQHFISLDTDRSGTVDPQELQKALTTMGFRLSP--------QAVNSIAKRYSTNGK 153
Query: 514 VHFDAFLDFMT--RESTDT----DTAEQVIDSF 540
+ FD ++ R TD+ DTA+Q + +F
Sbjct: 154 ITFDDYIACCVKLRALTDSFRRRDTAQQGVVNF 186
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 39/90 (43%), Gaps = 4/90 (4%)
Query: 442 ILTRDSKGITQEQLNEFRASFNHFDKNRTGRLAPEEFKSCLVSLG---YSIGKDRQGEID 498
+L SK +QE+ E F H DKN G+L +E L ++ Q E +
Sbjct: 332 LLYMASKLTSQEETKELTDIFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQIESE 391
Query: 499 FQRILAVVDPNSTGYVHFDAFLDF-MTRES 527
IL D + GY+ + F+ M R+S
Sbjct: 392 VDAILGAADFDRNGYIDYSEFVTVAMDRKS 421
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 7/66 (10%)
Query: 460 ASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPNSTGYVHFDAF 519
A+F FD + +G++ EE LG G + + ++L D N+ G V F+ F
Sbjct: 401 AAFQQFDSDGSGKITNEE-------LGRLFGVTEVDDETWHQVLQECDKNNDGEVDFEEF 453
Query: 520 LDFMTR 525
++ M +
Sbjct: 454 VEMMQK 459
>pdb|3DTP|E Chain E, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
pdb|3DTP|F Chain F, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
Length = 196
Score = 30.8 bits (68), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 23/110 (20%), Positives = 49/110 (44%), Gaps = 9/110 (8%)
Query: 450 ITQEQLNEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPN 509
TQ Q+ EF+ +F D+++ G ++ + ++ SLG + Q + ++V
Sbjct: 51 FTQHQVQEFKEAFQLIDQDKDGFISKNDIRATFDSLGRLCTE--------QELDSMV-AE 101
Query: 510 STGYVHFDAFLDFMTRESTDTDTAEQVIDSFRILAGDKPYILPDELRREL 559
+ G ++F FL TD + ++++F + + L+R L
Sbjct: 102 APGPINFTMFLTIFGDRIAGTDEEDVIVNAFNLFDEGDGKCKEETLKRSL 151
>pdb|1VEF|A Chain A, Acetylornithine Aminotransferase From Thermus Thermophilus
Hb8
pdb|1VEF|B Chain B, Acetylornithine Aminotransferase From Thermus Thermophilus
Hb8
pdb|1WKG|A Chain A, Acetylornithine Aminotransferase From Thermus Thermophilus
Hb8
pdb|1WKG|B Chain B, Acetylornithine Aminotransferase From Thermus Thermophilus
Hb8
pdb|1WKH|A Chain A, Acetylornithine Aminotransferase From Thermus Thermophilus
Hb8
pdb|1WKH|B Chain B, Acetylornithine Aminotransferase From Thermus Thermophilus
Hb8
Length = 395
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 36/75 (48%), Gaps = 19/75 (25%)
Query: 339 RRQFAEKANQVGPWIERQMDAVTSI------GMGLQGSLEDQLHRLKEYEQGVYAYKPHI 392
R + E+A ++GPW ++ A+ S GMGL LE LKE P+I
Sbjct: 303 RTRLWERAAELGPWFMEKLRAIPSPKIREVRGMGLMVGLE-----LKEKAA------PYI 351
Query: 393 EELEKIHQ--AVQEG 405
LEK H+ A+Q G
Sbjct: 352 ARLEKEHRVLALQAG 366
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 30.4 bits (67), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 37/82 (45%), Gaps = 3/82 (3%)
Query: 442 ILTRDSKGITQEQLNEFRASFNHFDKNRTGRLAPEEF---KSCLVSLGYSIGKDRQGEID 498
IL SK T E+ E F DKN G+L +E + L + +G+ + E +
Sbjct: 341 ILFIGSKLTTLEERKELTDIFKKLDKNGDGQLDKKELIEGYNVLRNFKNELGELKNVEEE 400
Query: 499 FQRILAVVDPNSTGYVHFDAFL 520
IL VD + GY+ + F+
Sbjct: 401 VDNILKEVDFDKNGYIEYSEFI 422
Score = 30.4 bits (67), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 29/68 (42%), Gaps = 7/68 (10%)
Query: 458 FRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPNSTGYVHFD 517
R +FN FD +++G++ EE L G E + +L D N + FD
Sbjct: 437 LRRAFNLFDTDKSGKITKEE-------LANLFGLTSISEKTWNDVLGEADQNKDNMIDFD 489
Query: 518 AFLDFMTR 525
F+ M +
Sbjct: 490 EFVSMMHK 497
>pdb|1Y1X|A Chain A, Structural Analysis Of A Homolog Of Programmed Cell Death
6 Protein From Leishmania Major Friedlin
pdb|1Y1X|B Chain B, Structural Analysis Of A Homolog Of Programmed Cell Death
6 Protein From Leishmania Major Friedlin
Length = 191
Score = 30.4 bits (67), Expect = 2.9, Method: Composition-based stats.
Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 5/64 (7%)
Query: 459 RASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPNSTGYVHFDA 518
R F D + GRL E ++ L+S GY + E FQ ++ D G + FD
Sbjct: 96 REGFRKRDSSGDGRLDSNEVRAALLSSGYQV-----SEQTFQALMRKFDRQRRGSLGFDD 150
Query: 519 FLDF 522
+++
Sbjct: 151 YVEL 154
>pdb|3L19|A Chain A, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
pdb|3L19|B Chain B, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
Length = 214
Score = 30.4 bits (67), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 39/90 (43%), Gaps = 4/90 (4%)
Query: 442 ILTRDSKGITQEQLNEFRASFNHFDKNRTGRLAPEEFKSCLVSLG---YSIGKDRQGEID 498
+L SK +QE+ E F H DKN G+L +E L ++ Q E +
Sbjct: 49 LLYMASKLTSQEETKELTDIFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQIESE 108
Query: 499 FQRILAVVDPNSTGYVHFDAFLDF-MTRES 527
IL D + GY+ + F+ M R+S
Sbjct: 109 VDAILGAADFDRNGYIDYSEFVTVAMDRKS 138
>pdb|2RRT|A Chain A, Solution Structure Of Magnesium-Bound Form Of Calmodulin
C-Domain E104dE140D MUTANT
Length = 72
Score = 30.0 bits (66), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 17/68 (25%), Positives = 35/68 (51%), Gaps = 5/68 (7%)
Query: 457 EFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPNSTGYVHF 516
E R +F FDK+ G ++ + + + +LG + + E+D ++ D + G V++
Sbjct: 8 EIREAFRVFDKDGNGYISAADLRHVMTNLGEKLTDE---EVD--EMIREADIDGDGQVNY 62
Query: 517 DAFLDFMT 524
+ F+ MT
Sbjct: 63 EDFVQMMT 70
>pdb|3FWB|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|E Chain E, Sac3:sus1:cdc31 Complex
pdb|3FWC|I Chain I, Sac3:sus1:cdc31 Complex
pdb|3FWC|M Chain M, Sac3:sus1:cdc31 Complex
Length = 161
Score = 30.0 bits (66), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 46/100 (46%), Gaps = 11/100 (11%)
Query: 450 ITQEQLNEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDP- 508
+ +EQ E +F+ FD N G L E K + +LG+ + K + IL ++D
Sbjct: 17 LLEEQKQEIYEAFSLFDMNNDGFLDYHELKVAMKALGFELPK--------REILDLIDEY 68
Query: 509 NSTG--YVHFDAFLDFMTRESTDTDTAEQVIDSFRILAGD 546
+S G + +D F M + D +++ +F++ D
Sbjct: 69 DSEGRHLMKYDDFYIVMGEKILKRDPLDEIKRAFQLFDDD 108
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 30.0 bits (66), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 37/85 (43%), Gaps = 6/85 (7%)
Query: 442 ILTRDSKGITQEQLNEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQG------ 495
+L SK +Q++ E A F+ DKN G+L E L G+D
Sbjct: 321 LLYXGSKLTSQDETKELTAIFHKXDKNGDGQLDRAELIEGYKELXRXKGQDASXLDASAV 380
Query: 496 EIDFQRILAVVDPNSTGYVHFDAFL 520
E + ++L VD + GY+ + F+
Sbjct: 381 EHEVDQVLDAVDFDKNGYIEYSEFV 405
>pdb|1FPW|A Chain A, Structure Of Yeast Frequenin
pdb|2JU0|A Chain A, Structure Of Yeast Frequenin Bound To Pdtins 4-Kinase
Length = 190
Score = 30.0 bits (66), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 20/85 (23%), Positives = 41/85 (48%), Gaps = 10/85 (11%)
Query: 442 ILTRDSKGITQEQLNEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGK-------DRQ 494
+L+ S+G +E+L+ +F +D N G + +E + + S+ +G +
Sbjct: 88 VLSTTSRGTLEEKLS---WAFELYDLNHDGYITFDEMLTIVASVYKMMGSMVTLNEDEAT 144
Query: 495 GEIDFQRILAVVDPNSTGYVHFDAF 519
E+ ++I ++D N GY+ D F
Sbjct: 145 PEMRVKKIFKLMDKNEDGYITLDEF 169
>pdb|2COL|B Chain B, Crystal Structure Analysis Of CyaaC-Cam With Pyrophosphate
Length = 67
Score = 30.0 bits (66), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 17/67 (25%), Positives = 34/67 (50%), Gaps = 5/67 (7%)
Query: 457 EFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPNSTGYVHF 516
E R +F FDK+ G ++ E + + +LG + + E+D ++ D + G V++
Sbjct: 6 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE---EVD--EMIREADIDGDGQVNY 60
Query: 517 DAFLDFM 523
+ F+ M
Sbjct: 61 EEFVQMM 67
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 29.6 bits (65), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 39/87 (44%), Gaps = 10/87 (11%)
Query: 442 ILTRDSKGITQEQLNEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDR-------- 493
+L SK +Q++ E A F+ DKN G+L E L G+D
Sbjct: 321 LLYMGSKLTSQDETKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAV 380
Query: 494 QGEIDFQRILAVVDPNSTGYVHFDAFL 520
+ E+D ++L VD + GY+ + F+
Sbjct: 381 EHEVD--QVLDAVDFDKNGYIEYSEFV 405
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 29.6 bits (65), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 39/87 (44%), Gaps = 10/87 (11%)
Query: 442 ILTRDSKGITQEQLNEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDR-------- 493
+L SK +Q++ E A F+ DKN G+L E L G+D
Sbjct: 344 LLYMGSKLTSQDETKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAV 403
Query: 494 QGEIDFQRILAVVDPNSTGYVHFDAFL 520
+ E+D ++L VD + GY+ + F+
Sbjct: 404 EHEVD--QVLDAVDFDKNGYIEYSEFV 428
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 29.6 bits (65), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 37/85 (43%), Gaps = 6/85 (7%)
Query: 442 ILTRDSKGITQEQLNEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQG------ 495
+L SK +Q++ E A F+ DKN G+L E L G+D
Sbjct: 345 LLYMGSKLTSQDETKELTAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAV 404
Query: 496 EIDFQRILAVVDPNSTGYVHFDAFL 520
E + ++L VD + GY+ + F+
Sbjct: 405 EHEVDQVLDAVDFDKNGYIEYSEFV 429
>pdb|1GGW|A Chain A, Cdc4p From Schizosaccharomyces Pombe
Length = 140
Score = 29.6 bits (65), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 25/57 (43%)
Query: 441 QILTRDSKGITQEQLNEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEI 497
Q+L R + EF F FDK+ TG + E + L SLG + + E+
Sbjct: 61 QVLNRPNGFDMPGDPEEFVKGFQVFDKDATGMIGVGELRYVLTSLGEKLSNEEMDEL 117
>pdb|2OEX|A Chain A, Structure Of AlixAIP1 V DOMAIN
pdb|2OEX|B Chain B, Structure Of AlixAIP1 V DOMAIN
Length = 351
Score = 29.3 bits (64), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 65/148 (43%), Gaps = 21/148 (14%)
Query: 134 LNELKALKKKHEAFESDL-AAHQDRVEQ-IAAIAQELNTLEYHDSVSVNARCQRICDQWD 191
L+ L +KK+ E E+DL + + D + + A+AQ D V +N + +
Sbjct: 205 LSNLDEVKKEREGLENDLKSVNFDXTSKFLTALAQ--------DGV-INEEALSVTELDR 255
Query: 192 HLGALTQQRRHALDEAEKILEKIDILHLEFAKRAAPFNNWLDGTREDLVDMFIVHTMEEI 251
G LT + + +L + E +L+ I + H EF+K N RE++ ++ +
Sbjct: 256 VYGGLTTKVQESLKKQEGLLKNIQVSHQEFSKXKQSNNEA--NLREEV--------LKNL 305
Query: 252 QGLIDAHSQFKATLGEADKEYNSIVNLV 279
D + A L E K YN + ++
Sbjct: 306 ATAYDNFVELVANLKEGTKFYNELTEIL 333
>pdb|2OJQ|A Chain A, Crystal Structure Of Alix V Domain
Length = 348
Score = 29.3 bits (64), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 65/148 (43%), Gaps = 21/148 (14%)
Query: 134 LNELKALKKKHEAFESDL-AAHQDRVEQ-IAAIAQELNTLEYHDSVSVNARCQRICDQWD 191
L+ L +KK+ E E+DL + + D + + A+AQ D V +N + +
Sbjct: 202 LSNLDEVKKEREGLENDLKSVNFDXTSKFLTALAQ--------DGV-INEEALSVTELDR 252
Query: 192 HLGALTQQRRHALDEAEKILEKIDILHLEFAKRAAPFNNWLDGTREDLVDMFIVHTMEEI 251
G LT + + +L + E +L+ I + H EF+K NN + E L ++ +
Sbjct: 253 VYGGLTTKVQESLKKQEGLLKNIQVSHQEFSKXKQS-NNEANLREEVLKNLATAY----- 306
Query: 252 QGLIDAHSQFKATLGEADKEYNSIVNLV 279
D + A L E K YN + ++
Sbjct: 307 ----DNFVELVANLKEGTKFYNELTEIL 330
>pdb|2AAO|A Chain A, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
pdb|2AAO|B Chain B, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
Length = 166
Score = 29.3 bits (64), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 14/55 (25%), Positives = 25/55 (45%), Gaps = 10/55 (18%)
Query: 460 ASFNHFDKNRTGRLAPEEFKSCLVSLGY----------SIGKDRQGEIDFQRILA 504
A+F +FDK+ +G + P+E + G + +D G ID+ +A
Sbjct: 103 AAFTYFDKDGSGYITPDELQQACEEFGVEDVRIEELXRDVDQDNDGRIDYNEFVA 157
>pdb|3DTP|B Chain B, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
Length = 973
Score = 29.3 bits (64), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 58/122 (47%), Gaps = 2/122 (1%)
Query: 103 AQKFKHKADIHEDWTRGKEEMLQSSDFRQCKLNE-LKALKKKHEAFESDLAAHQDRVEQI 161
A++ K A + E++TR K E L+ S+ R+ +L E + +L ++ + + A QD +
Sbjct: 853 AEREKEMASMKEEFTRLK-EALEKSEARRKELEEKMVSLLQEKNDLQLQVQAEQDNLADA 911
Query: 162 AAIAQELNTLEYHDSVSVNARCQRICDQWDHLGALTQQRRHALDEAEKILEKIDILHLEF 221
+L + V +R+ D+ + LT ++R DE ++ ID L L
Sbjct: 912 EERCDQLIKNKIQLEAKVKEMNERLEDEEEMNAELTAKKRKLEDECSELKRDIDDLELTL 971
Query: 222 AK 223
AK
Sbjct: 972 AK 973
>pdb|3TUY|B Chain B, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
pdb|3TUY|E Chain E, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
Length = 161
Score = 29.3 bits (64), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 21/94 (22%), Positives = 44/94 (46%), Gaps = 9/94 (9%)
Query: 450 ITQEQLNEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPN 509
+ Q+ + E + +F D+NR G + + K SLG + D++ L +
Sbjct: 17 LPQKLMQEMKEAFTMIDQNRDGFIDINDLKEMFSSLGRT-PDDKE--------LTAMLKE 67
Query: 510 STGYVHFDAFLDFMTRESTDTDTAEQVIDSFRIL 543
+ G ++F FL + + + TD+ E + ++F +
Sbjct: 68 APGPLNFTMFLSIFSDKLSGTDSEETIRNAFGMF 101
>pdb|3PN7|B Chain B, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3PN7|E Chain E, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3TS5|B Chain B, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
pdb|3TS5|E Chain E, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
Length = 161
Score = 29.3 bits (64), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 21/94 (22%), Positives = 44/94 (46%), Gaps = 9/94 (9%)
Query: 450 ITQEQLNEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPN 509
+ Q+ + E + +F D+NR G + + K SLG + D++ L +
Sbjct: 17 LPQKLMQEMKEAFTMIDQNRDGFIDINDLKEMFSSLGRT-PDDKE--------LTAMLKE 67
Query: 510 STGYVHFDAFLDFMTRESTDTDTAEQVIDSFRIL 543
+ G ++F FL + + + TD+ E + ++F +
Sbjct: 68 APGPLNFTMFLSIFSDKLSGTDSEETIRNAFGMF 101
>pdb|3RV5|A Chain A, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
pdb|3RV5|B Chain B, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
pdb|3RV5|C Chain C, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
pdb|3RV5|D Chain D, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
Length = 89
Score = 28.9 bits (63), Expect = 8.5, Method: Composition-based stats.
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 6/81 (7%)
Query: 450 ITQEQLNEFRASFNHFDKN-RTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDP 508
+T+EQ NEF+A+F+ F G ++ +E LG + + + Q + VD
Sbjct: 12 LTEEQKNEFKAAFDIFVLGAEDGCISTKELGKVXRXLGQNPTPE-----ELQEXIDEVDE 66
Query: 509 NSTGYVHFDAFLDFMTRESTD 529
+ +G V FD FL R D
Sbjct: 67 DGSGTVDFDEFLVXXVRCXKD 87
>pdb|2GV5|A Chain A, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|B Chain B, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|D Chain D, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|E Chain E, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|A Chain A, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|B Chain B, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|C Chain C, Crystal Structure Of Sfi1pCDC31P COMPLEX
Length = 161
Score = 28.9 bits (63), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 32/73 (43%), Gaps = 8/73 (10%)
Query: 450 ITQEQLNEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPN 509
+ +EQ E +F+ FD N G L E K +LG+ + K + IL ++D
Sbjct: 17 LLEEQKQEIYEAFSLFDXNNDGFLDYHELKVAXKALGFELPK--------REILDLIDEY 68
Query: 510 STGYVHFDAFLDF 522
+ H + DF
Sbjct: 69 DSEGRHLXKYDDF 81
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.316 0.132 0.381
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,206,861
Number of Sequences: 62578
Number of extensions: 692526
Number of successful extensions: 2517
Number of sequences better than 100.0: 225
Number of HSP's better than 100.0 without gapping: 114
Number of HSP's successfully gapped in prelim test: 111
Number of HSP's that attempted gapping in prelim test: 2199
Number of HSP's gapped (non-prelim): 346
length of query: 599
length of database: 14,973,337
effective HSP length: 104
effective length of query: 495
effective length of database: 8,465,225
effective search space: 4190286375
effective search space used: 4190286375
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 54 (25.4 bits)