Query psy12562
Match_columns 599
No_of_seqs 296 out of 3204
Neff 10.0
Searched_HMMs 46136
Date Fri Aug 16 22:31:10 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy12562.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/12562hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0517|consensus 100.0 6.6E-51 1.4E-55 437.1 48.7 449 3-468 317-892 (2473)
2 KOG0040|consensus 100.0 2.3E-49 5.1E-54 417.2 52.9 558 4-596 1613-2399(2399)
3 KOG0517|consensus 100.0 1.2E-40 2.7E-45 358.5 42.7 403 4-447 544-955 (2473)
4 KOG0040|consensus 100.0 2.1E-31 4.5E-36 282.4 31.6 385 33-449 80-474 (2399)
5 KOG0035|consensus 100.0 6.7E-32 1.5E-36 282.8 16.0 595 1-598 292-889 (890)
6 COG5126 FRQ1 Ca2+-binding prot 99.9 4.6E-22 1E-26 169.9 15.0 148 444-598 8-159 (160)
7 cd00176 SPEC Spectrin repeats, 99.8 2.7E-19 5.9E-24 169.1 21.3 211 103-328 2-212 (213)
8 KOG0027|consensus 99.8 4.6E-20 9.9E-25 162.8 13.5 141 450-596 2-150 (151)
9 KOG0028|consensus 99.8 5.7E-18 1.2E-22 140.3 11.8 143 448-596 25-171 (172)
10 PTZ00183 centrin; Provisional 99.7 1.3E-16 2.9E-21 142.9 15.7 143 447-599 8-158 (158)
11 cd00176 SPEC Spectrin repeats, 99.7 2.1E-16 4.6E-21 149.3 16.2 207 220-441 4-212 (213)
12 KOG4286|consensus 99.7 8.7E-14 1.9E-18 141.4 32.5 461 103-598 3-583 (966)
13 PTZ00184 calmodulin; Provision 99.7 4.5E-16 9.7E-21 138.0 13.7 141 449-595 4-148 (149)
14 KOG0030|consensus 99.7 4.9E-16 1.1E-20 125.5 11.5 136 449-595 4-151 (152)
15 KOG0031|consensus 99.7 1.2E-15 2.6E-20 125.5 13.5 133 448-594 24-164 (171)
16 KOG0034|consensus 99.7 9.3E-16 2E-20 136.6 11.7 142 448-599 25-179 (187)
17 KOG4286|consensus 99.6 1.1E-11 2.4E-16 126.5 41.2 445 70-559 75-578 (966)
18 KOG0044|consensus 99.5 1.4E-13 3.1E-18 122.5 10.7 143 447-597 20-177 (193)
19 KOG0037|consensus 99.5 8.1E-13 1.8E-17 116.6 12.3 125 455-595 56-188 (221)
20 smart00150 SPEC Spectrin repea 99.4 1.3E-12 2.8E-17 107.2 11.8 100 105-205 2-101 (101)
21 PF00435 Spectrin: Spectrin re 99.4 9.8E-12 2.1E-16 102.7 14.0 104 102-206 2-105 (105)
22 KOG0036|consensus 99.2 1.9E-10 4.2E-15 110.6 12.8 133 449-597 7-148 (463)
23 KOG4223|consensus 99.1 2.8E-10 6.2E-15 106.6 10.4 137 455-597 76-230 (325)
24 KOG0038|consensus 99.1 3.6E-10 7.8E-15 92.2 8.5 143 447-599 19-181 (189)
25 PLN02964 phosphatidylserine de 99.1 5.6E-10 1.2E-14 117.8 11.1 102 448-559 135-241 (644)
26 smart00150 SPEC Spectrin repea 99.1 1.7E-10 3.7E-15 94.5 5.7 99 221-326 3-101 (101)
27 KOG0037|consensus 99.1 3.2E-09 7E-14 94.1 13.2 84 456-551 124-208 (221)
28 cd05022 S-100A13 S-100A13: S-1 99.0 1.5E-09 3.2E-14 84.8 7.9 67 455-526 7-76 (89)
29 PF00435 Spectrin: Spectrin re 99.0 1.7E-09 3.7E-14 89.2 7.6 102 219-327 4-105 (105)
30 PF13499 EF-hand_7: EF-hand do 98.9 2.5E-09 5.4E-14 79.7 6.9 66 457-523 1-66 (66)
31 cd05027 S-100B S-100B: S-100B 98.9 5.7E-09 1.2E-13 81.8 8.7 66 455-525 7-79 (88)
32 KOG0027|consensus 98.9 2E-08 4.4E-13 88.5 10.7 104 456-560 44-148 (151)
33 KOG4223|consensus 98.9 2E-08 4.3E-13 94.4 11.0 131 455-591 162-301 (325)
34 smart00027 EH Eps15 homology d 98.8 2.5E-08 5.4E-13 80.3 8.8 70 449-525 3-72 (96)
35 KOG0044|consensus 98.8 7.7E-08 1.7E-12 86.1 11.5 140 391-560 24-174 (193)
36 COG5126 FRQ1 Ca2+-binding prot 98.8 6.2E-08 1.4E-12 83.5 10.1 97 456-559 56-154 (160)
37 cd05029 S-100A6 S-100A6: S-100 98.7 7.1E-08 1.5E-12 75.6 8.5 69 453-526 7-80 (88)
38 cd05025 S-100A1 S-100A1: S-100 98.7 9E-08 2E-12 76.4 8.8 66 456-526 9-81 (92)
39 KOG0377|consensus 98.7 8.6E-08 1.9E-12 92.9 9.9 131 456-594 464-614 (631)
40 cd05031 S-100A10_like S-100A10 98.7 9E-08 2E-12 76.7 8.2 66 455-525 7-79 (94)
41 cd00213 S-100 S-100: S-100 dom 98.7 8.8E-08 1.9E-12 75.9 8.1 73 452-525 4-79 (88)
42 PTZ00183 centrin; Provisional 98.7 1.8E-07 3.9E-12 83.5 10.9 98 456-559 53-152 (158)
43 cd05026 S-100Z S-100Z: S-100Z 98.7 1.3E-07 2.9E-12 75.2 8.8 67 455-526 9-82 (93)
44 PF13833 EF-hand_8: EF-hand do 98.6 8.9E-08 1.9E-12 67.9 5.9 52 469-525 1-53 (54)
45 PTZ00184 calmodulin; Provision 98.6 3.3E-07 7.2E-12 80.8 10.5 98 456-559 47-146 (149)
46 PF14658 EF-hand_9: EF-hand do 98.6 1.3E-07 2.9E-12 67.6 6.1 60 461-525 3-64 (66)
47 PF13499 EF-hand_7: EF-hand do 98.6 2.4E-08 5.2E-13 74.3 1.6 57 500-556 3-63 (66)
48 cd00052 EH Eps15 homology doma 98.6 2.3E-07 5E-12 69.3 7.0 60 459-525 2-61 (67)
49 PF08726 EFhand_Ca_insen: Ca2+ 98.5 3.4E-08 7.3E-13 71.9 1.8 65 531-595 3-69 (69)
50 cd05022 S-100A13 S-100A13: S-1 98.5 1.5E-07 3.3E-12 73.6 5.1 61 534-595 8-75 (89)
51 cd00051 EFh EF-hand, calcium b 98.5 8E-07 1.7E-11 65.0 7.7 61 458-523 2-62 (63)
52 cd05023 S-100A11 S-100A11: S-1 98.5 1E-06 2.2E-11 69.2 8.4 68 454-526 7-81 (89)
53 KOG0028|consensus 98.4 1.8E-06 4E-11 72.6 9.6 99 456-560 69-169 (172)
54 cd00252 SPARC_EC SPARC_EC; ext 98.4 1.5E-06 3.2E-11 71.6 8.0 66 451-525 43-108 (116)
55 KOG4251|consensus 98.4 4.1E-07 8.9E-12 81.4 4.8 139 455-597 100-266 (362)
56 KOG0035|consensus 98.4 2.2E-06 4.8E-11 92.2 10.7 322 101-436 272-614 (890)
57 KOG0034|consensus 98.3 3.9E-06 8.4E-11 75.3 10.2 97 459-559 69-173 (187)
58 cd00252 SPARC_EC SPARC_EC; ext 98.2 1.1E-06 2.3E-11 72.5 4.3 61 534-596 48-109 (116)
59 cd05030 calgranulins Calgranul 98.2 5E-06 1.1E-10 65.4 7.6 71 455-526 7-80 (88)
60 cd05027 S-100B S-100B: S-100B 98.2 1.8E-06 3.9E-11 67.7 4.8 56 534-594 8-78 (88)
61 KOG0041|consensus 98.2 6.3E-06 1.4E-10 71.8 8.4 104 449-557 92-199 (244)
62 cd05026 S-100Z S-100Z: S-100Z 98.2 1.3E-06 2.8E-11 69.6 3.7 60 534-594 10-80 (93)
63 KOG0036|consensus 98.1 9.7E-05 2.1E-09 72.0 13.9 93 456-559 51-144 (463)
64 cd05025 S-100A1 S-100A1: S-100 98.0 6.7E-06 1.5E-10 65.5 4.9 25 535-559 10-37 (92)
65 KOG2562|consensus 98.0 1.9E-05 4.1E-10 78.1 8.9 132 451-592 273-421 (493)
66 cd05029 S-100A6 S-100A6: S-100 98.0 7.1E-06 1.5E-10 64.3 4.8 56 535-595 11-79 (88)
67 KOG0031|consensus 98.0 0.00038 8.2E-09 58.4 14.1 135 353-525 31-165 (171)
68 cd05023 S-100A11 S-100A11: S-1 98.0 1.1E-05 2.5E-10 63.3 5.0 61 534-595 9-80 (89)
69 PF00036 EF-hand_1: EF hand; 97.9 1.5E-05 3.3E-10 47.6 3.5 28 498-525 1-28 (29)
70 cd05031 S-100A10_like S-100A10 97.9 7.5E-06 1.6E-10 65.6 2.7 17 576-593 61-77 (94)
71 cd00052 EH Eps15 homology doma 97.9 2.2E-05 4.9E-10 58.4 4.6 54 501-557 3-57 (67)
72 KOG2643|consensus 97.8 7.9E-05 1.7E-09 73.2 9.1 131 456-595 318-453 (489)
73 cd05024 S-100A10 S-100A10: A s 97.8 0.00017 3.8E-09 55.9 8.8 70 455-526 7-77 (91)
74 KOG2643|consensus 97.7 8.8E-05 1.9E-09 72.8 7.8 131 456-593 233-382 (489)
75 cd05024 S-100A10 S-100A10: A s 97.7 5.8E-05 1.3E-09 58.5 5.3 56 534-594 8-75 (91)
76 cd00051 EFh EF-hand, calcium b 97.7 0.00011 2.4E-09 53.3 6.4 60 499-559 2-62 (63)
77 PF00036 EF-hand_1: EF hand; 97.7 3.5E-05 7.5E-10 46.0 2.8 29 457-485 1-29 (29)
78 KOG0030|consensus 97.7 0.00012 2.6E-09 60.2 6.3 64 455-524 87-150 (152)
79 PLN02964 phosphatidylserine de 97.7 0.00016 3.6E-09 77.1 8.9 71 450-525 173-243 (644)
80 smart00027 EH Eps15 homology d 97.6 0.00019 4.1E-09 57.7 6.5 60 497-559 10-70 (96)
81 PF13833 EF-hand_8: EF-hand do 97.6 8.3E-05 1.8E-09 52.5 3.9 48 511-559 2-51 (54)
82 PF12763 EF-hand_4: Cytoskelet 97.6 0.00018 3.8E-09 58.1 5.8 69 449-525 3-71 (104)
83 PF13405 EF-hand_6: EF-hand do 97.5 8.7E-05 1.9E-09 45.4 2.9 30 457-486 1-31 (31)
84 KOG4666|consensus 97.5 5.6E-05 1.2E-09 71.1 2.6 119 468-598 239-362 (412)
85 cd00213 S-100 S-100: S-100 dom 97.5 0.00016 3.5E-09 57.1 4.8 62 498-559 9-77 (88)
86 PRK12309 transaldolase/EF-hand 97.5 0.00064 1.4E-08 68.8 10.0 52 456-525 334-385 (391)
87 cd05030 calgranulins Calgranul 97.5 0.00018 4E-09 56.5 4.7 60 534-594 8-78 (88)
88 PF14658 EF-hand_9: EF-hand do 97.4 7.2E-05 1.6E-09 53.7 1.9 54 539-594 3-63 (66)
89 KOG0038|consensus 97.3 0.00056 1.2E-08 56.6 6.3 95 460-559 75-175 (189)
90 PF14788 EF-hand_10: EF hand; 97.3 0.00057 1.2E-08 46.1 5.1 49 472-525 1-49 (51)
91 PF12128 DUF3584: Protein of u 97.3 0.51 1.1E-05 56.2 33.1 130 71-212 719-861 (1201)
92 KOG0169|consensus 97.2 0.0042 9.1E-08 66.0 12.5 135 452-596 132-275 (746)
93 PF13202 EF-hand_5: EF hand; P 97.0 0.00088 1.9E-08 38.4 3.2 23 500-522 2-24 (25)
94 KOG0041|consensus 97.0 0.00072 1.6E-08 59.3 3.7 58 535-593 100-161 (244)
95 KOG0377|consensus 97.0 0.0021 4.6E-08 63.2 7.1 65 456-525 547-615 (631)
96 KOG4065|consensus 96.9 0.00082 1.8E-08 53.1 3.0 32 560-592 111-142 (144)
97 KOG2562|consensus 96.9 0.0055 1.2E-07 61.1 9.4 95 501-596 229-344 (493)
98 PF10591 SPARC_Ca_bdg: Secrete 96.9 0.0032 7E-08 51.8 6.6 65 451-522 49-113 (113)
99 KOG0046|consensus 96.8 0.0033 7.2E-08 63.4 7.5 75 448-525 11-85 (627)
100 KOG4240|consensus 96.7 0.092 2E-06 58.4 18.1 145 67-212 242-387 (1025)
101 KOG0751|consensus 96.7 0.0044 9.6E-08 61.9 7.2 96 456-559 108-205 (694)
102 PRK12309 transaldolase/EF-hand 96.7 0.0034 7.3E-08 63.6 6.5 50 495-558 332-382 (391)
103 PF13202 EF-hand_5: EF hand; P 96.7 0.0016 3.4E-08 37.4 2.3 25 458-482 1-25 (25)
104 KOG0751|consensus 96.5 0.034 7.3E-07 55.9 11.9 97 456-559 33-134 (694)
105 PF13405 EF-hand_6: EF-hand do 96.4 0.0043 9.4E-08 37.8 3.3 26 499-524 2-27 (31)
106 KOG4251|consensus 96.2 0.016 3.4E-07 52.7 6.9 134 457-591 141-341 (362)
107 PF10591 SPARC_Ca_bdg: Secrete 95.6 0.0035 7.5E-08 51.7 0.3 58 534-592 54-113 (113)
108 KOG0994|consensus 95.3 6.9 0.00015 44.3 30.9 28 303-330 1662-1689(1758)
109 PF05042 Caleosin: Caleosin re 95.2 0.21 4.6E-06 43.6 9.8 103 456-559 7-164 (174)
110 KOG1029|consensus 95.1 0.21 4.4E-06 53.2 10.9 58 536-594 197-256 (1118)
111 KOG4666|consensus 94.9 0.05 1.1E-06 51.8 5.4 97 456-559 259-357 (412)
112 KOG0994|consensus 94.8 9.1 0.0002 43.4 36.4 83 8-90 1198-1291(1758)
113 KOG4065|consensus 94.7 0.042 9.1E-07 43.7 3.8 72 449-522 62-142 (144)
114 smart00054 EFh EF-hand, calciu 94.6 0.045 9.7E-07 31.8 3.0 26 499-524 2-27 (29)
115 smart00054 EFh EF-hand, calciu 94.5 0.042 9.1E-07 32.0 2.8 27 458-484 2-28 (29)
116 COG5069 SAC6 Ca2+-binding acti 93.8 3.2 7E-05 42.2 15.6 123 455-595 484-611 (612)
117 KOG0046|consensus 93.5 0.083 1.8E-06 53.8 4.0 59 535-595 20-85 (627)
118 KOG4240|consensus 93.4 2.9 6.3E-05 47.1 15.9 143 174-330 241-384 (1025)
119 PF12763 EF-hand_4: Cytoskelet 93.3 0.14 3.1E-06 41.3 4.5 60 496-559 9-69 (104)
120 KOG1707|consensus 92.5 0.56 1.2E-05 49.0 8.4 138 449-594 188-376 (625)
121 PF09279 EF-hand_like: Phospho 92.4 0.23 4.9E-06 38.4 4.4 64 457-526 1-70 (83)
122 KOG0161|consensus 92.2 37 0.0008 42.0 34.5 93 306-401 1319-1411(1930)
123 PLN02952 phosphoinositide phos 92.1 0.42 9.1E-06 51.2 7.2 86 510-596 13-111 (599)
124 KOG1265|consensus 91.8 0.81 1.8E-05 49.9 8.9 78 514-596 205-300 (1189)
125 PF14788 EF-hand_10: EF hand; 91.5 0.32 7E-06 33.1 3.7 44 514-558 2-46 (51)
126 KOG1955|consensus 89.4 0.94 2E-05 45.9 6.4 70 449-525 224-293 (737)
127 PF09279 EF-hand_like: Phospho 89.0 0.52 1.1E-05 36.4 3.6 61 498-559 1-67 (83)
128 PRK04863 mukB cell division pr 88.7 67 0.0015 39.2 32.3 127 246-375 932-1058(1486)
129 PF08580 KAR9: Yeast cortical 88.5 45 0.00098 37.0 22.8 112 108-236 36-150 (683)
130 KOG3555|consensus 88.3 0.96 2.1E-05 43.7 5.4 97 456-559 211-308 (434)
131 KOG4347|consensus 87.5 3 6.5E-05 44.2 8.9 102 447-555 495-612 (671)
132 KOG1029|consensus 86.9 0.9 1.9E-05 48.7 4.7 65 453-524 192-256 (1118)
133 KOG0161|consensus 85.7 1.1E+02 0.0023 38.4 35.9 27 414-440 1568-1594(1930)
134 KOG0042|consensus 85.4 5.4 0.00012 41.8 9.2 74 449-527 586-659 (680)
135 KOG3555|consensus 82.6 5.3 0.00012 38.9 7.4 68 449-525 243-310 (434)
136 PF06008 Laminin_I: Laminin Do 81.8 52 0.0011 31.8 24.3 63 339-402 187-249 (264)
137 PF09069 EF-hand_3: EF-hand; 81.5 12 0.00025 29.3 7.7 67 456-526 3-76 (90)
138 KOG4578|consensus 79.8 1.2 2.7E-05 42.7 2.2 68 455-526 332-399 (421)
139 KOG2243|consensus 79.8 1.6 3.5E-05 49.5 3.3 52 539-595 4062-4120(5019)
140 TIGR02169 SMC_prok_A chromosom 79.7 1.5E+02 0.0032 35.7 32.3 18 179-196 292-309 (1164)
141 KOG2243|consensus 79.4 13 0.00029 42.8 9.9 60 459-524 4060-4119(5019)
142 KOG4578|consensus 78.6 1.4 2.9E-05 42.4 2.0 61 535-596 334-399 (421)
143 KOG3866|consensus 77.6 3.3 7.1E-05 39.5 4.2 67 459-525 247-324 (442)
144 KOG0976|consensus 77.1 1.2E+02 0.0027 33.4 26.6 77 138-214 123-199 (1265)
145 PF14513 DAG_kinase_N: Diacylg 76.9 5.2 0.00011 34.1 4.9 69 471-546 6-81 (138)
146 PF14643 DUF4455: Domain of un 76.9 1.1E+02 0.0023 32.6 38.6 100 36-143 33-134 (473)
147 KOG4809|consensus 76.5 1.1E+02 0.0023 32.3 23.6 166 33-207 328-493 (654)
148 PF05517 p25-alpha: p25-alpha 76.2 9.5 0.00021 33.4 6.6 65 459-525 2-69 (154)
149 PRK04778 septation ring format 75.2 1.3E+02 0.0029 32.8 33.3 121 65-197 63-188 (569)
150 KOG1707|consensus 74.7 3.4 7.4E-05 43.5 3.9 73 445-525 304-377 (625)
151 COG1196 Smc Chromosome segrega 73.4 2.1E+02 0.0047 34.4 36.0 22 456-477 1020-1041(1163)
152 TIGR02168 SMC_prok_B chromosom 68.2 2.7E+02 0.0059 33.5 39.4 17 458-474 1045-1061(1179)
153 PF08414 NADPH_Ox: Respiratory 67.9 17 0.00037 28.7 5.4 61 456-526 30-93 (100)
154 PF05218 DUF713: Protein of un 67.8 95 0.0021 28.0 15.2 56 313-386 5-60 (182)
155 KOG1264|consensus 67.3 12 0.00026 40.9 5.9 144 448-596 135-294 (1267)
156 TIGR02169 SMC_prok_A chromosom 66.9 2.9E+02 0.0062 33.3 42.4 19 456-475 1029-1047(1164)
157 KOG0933|consensus 66.0 2.5E+02 0.0054 32.3 31.2 39 244-282 810-848 (1174)
158 PF10191 COG7: Golgi complex c 65.4 2.5E+02 0.0054 32.0 18.2 48 105-153 4-52 (766)
159 PF12128 DUF3584: Protein of u 65.1 3.2E+02 0.0069 33.1 40.1 81 178-269 711-791 (1201)
160 KOG4004|consensus 64.0 4.1 8.8E-05 36.3 1.6 53 540-593 193-248 (259)
161 PLN02952 phosphoinositide phos 63.6 42 0.00092 36.4 9.3 88 469-560 13-109 (599)
162 KOG3866|consensus 62.2 3 6.4E-05 39.8 0.4 47 474-525 225-272 (442)
163 KOG0169|consensus 59.5 30 0.00065 37.9 7.3 75 495-571 134-214 (746)
164 cd07313 terB_like_2 tellurium 59.2 24 0.00053 28.3 5.3 81 470-556 13-95 (104)
165 PF06008 Laminin_I: Laminin Do 58.2 1.8E+02 0.0039 28.0 28.3 124 132-277 120-244 (264)
166 PF12325 TMF_TATA_bd: TATA ele 56.3 1.2E+02 0.0025 25.3 11.2 77 131-207 12-101 (120)
167 TIGR00606 rad50 rad50. This fa 56.0 4.7E+02 0.01 32.1 44.1 24 104-127 795-818 (1311)
168 PF13514 AAA_27: AAA domain 54.6 4.5E+02 0.0098 31.6 33.6 138 132-283 239-380 (1111)
169 KOG0998|consensus 53.8 15 0.00034 41.8 4.3 61 534-595 283-345 (847)
170 PRK04863 mukB cell division pr 51.9 5.6E+02 0.012 31.8 40.2 114 96-213 357-474 (1486)
171 PF09069 EF-hand_3: EF-hand; 51.4 39 0.00084 26.4 4.9 58 534-598 3-78 (90)
172 COG1196 Smc Chromosome segrega 50.7 5.3E+02 0.011 31.2 45.1 29 532-560 1073-1102(1163)
173 KOG0998|consensus 50.3 9.2 0.0002 43.5 1.9 70 449-525 276-345 (847)
174 PF10234 Cluap1: Clusterin-ass 50.1 2.4E+02 0.0053 27.1 12.9 57 179-235 181-237 (267)
175 KOG3958|consensus 47.7 2.7E+02 0.0059 27.0 23.3 79 129-207 222-306 (371)
176 PRK10869 recombination and rep 47.6 4.1E+02 0.0088 29.0 24.5 44 111-154 184-227 (553)
177 PF04849 HAP1_N: HAP1 N-termin 47.0 2.9E+02 0.0064 27.2 22.2 106 157-274 77-185 (306)
178 PRK10361 DNA recombination pro 45.9 3.9E+02 0.0084 28.3 13.0 159 248-428 35-209 (475)
179 KOG0516|consensus 45.8 5.9E+02 0.013 30.3 17.9 144 86-239 184-327 (1047)
180 PRK04778 septation ring format 45.4 4.5E+02 0.0097 28.8 39.7 130 68-197 121-272 (569)
181 PF11802 CENP-K: Centromere-as 44.8 2.9E+02 0.0063 26.5 16.7 121 107-240 22-144 (268)
182 KOG4807|consensus 43.6 3.6E+02 0.0077 27.2 23.9 181 132-330 382-575 (593)
183 cd07316 terB_like_DjlA N-termi 42.9 94 0.002 24.8 6.4 43 514-556 53-96 (106)
184 PF05600 DUF773: Protein of un 42.2 2.9E+02 0.0062 29.7 11.4 115 187-345 94-213 (507)
185 KOG4347|consensus 41.1 27 0.00059 37.4 3.5 58 456-519 555-612 (671)
186 PF05042 Caleosin: Caleosin re 39.8 1.2E+02 0.0025 27.0 6.6 67 456-523 96-164 (174)
187 smart00787 Spc7 Spc7 kinetocho 39.0 4E+02 0.0088 26.5 18.6 25 102-126 64-88 (312)
188 PRK10869 recombination and rep 38.7 5.5E+02 0.012 28.0 20.3 23 177-199 153-175 (553)
189 PF10498 IFT57: Intra-flagella 38.1 3.8E+02 0.0083 27.2 11.0 16 143-158 336-351 (359)
190 COG3883 Uncharacterized protei 37.8 3.8E+02 0.0082 25.8 20.5 72 137-212 40-111 (265)
191 KOG1955|consensus 36.0 46 0.00099 34.4 4.0 56 501-559 235-291 (737)
192 COG0497 RecN ATPase involved i 35.9 6E+02 0.013 27.5 21.8 241 139-401 114-374 (557)
193 PF00404 Dockerin_1: Dockerin 35.5 51 0.0011 17.9 2.4 18 466-483 1-18 (21)
194 PLN02228 Phosphoinositide phos 35.3 70 0.0015 34.5 5.5 68 492-561 19-92 (567)
195 KOG0516|consensus 34.5 8.7E+02 0.019 29.0 18.9 167 221-403 203-374 (1047)
196 KOG0039|consensus 34.4 47 0.001 36.8 4.2 77 511-595 2-89 (646)
197 PF12325 TMF_TATA_bd: TATA ele 34.3 2.7E+02 0.0059 23.2 9.2 39 244-282 11-49 (120)
198 TIGR00606 rad50 rad50. This fa 33.1 1E+03 0.022 29.3 47.4 117 40-163 550-667 (1311)
199 PF08976 DUF1880: Domain of un 33.0 32 0.0007 28.1 2.0 31 495-525 5-35 (118)
200 PLN02230 phosphoinositide phos 31.9 78 0.0017 34.4 5.2 65 494-559 26-100 (598)
201 KOG1853|consensus 31.3 4.5E+02 0.0099 24.8 16.5 22 105-126 38-59 (333)
202 PF05667 DUF812: Protein of un 31.0 7.5E+02 0.016 27.2 29.9 30 179-208 406-435 (594)
203 PF13514 AAA_27: AAA domain 30.6 1E+03 0.022 28.6 40.8 44 12-56 450-493 (1111)
204 PRK10929 putative mechanosensi 30.0 1E+03 0.022 28.5 29.5 136 64-204 100-238 (1109)
205 KOG2871|consensus 28.5 41 0.00089 33.4 2.2 65 455-524 308-373 (449)
206 cd07176 terB tellurite resista 28.2 1.3E+02 0.0028 24.1 5.0 82 470-556 16-100 (111)
207 PF08580 KAR9: Yeast cortical 27.9 9E+02 0.02 27.1 27.4 58 175-240 236-293 (683)
208 PF05099 TerB: Tellurite resis 27.7 40 0.00087 28.7 1.9 81 469-556 36-119 (140)
209 PF05517 p25-alpha: p25-alpha 27.4 58 0.0013 28.5 2.8 60 500-559 2-67 (154)
210 PLN02222 phosphoinositide phos 26.4 1E+02 0.0022 33.5 4.9 66 494-561 22-90 (581)
211 PF07544 Med9: RNA polymerase 26.3 2.6E+02 0.0056 21.4 5.9 53 342-395 26-78 (83)
212 PF03999 MAP65_ASE1: Microtubu 26.2 3.1E+02 0.0066 30.4 8.8 27 178-204 229-255 (619)
213 PF11616 EZH2_WD-Binding: WD r 25.5 1E+02 0.0022 18.4 2.6 18 177-194 9-26 (30)
214 KOG1265|consensus 25.3 3.2E+02 0.007 31.0 8.2 70 456-525 221-299 (1189)
215 PRK09039 hypothetical protein; 25.1 7.2E+02 0.016 25.1 20.4 81 142-226 123-204 (343)
216 PF12718 Tropomyosin_1: Tropom 24.5 4.6E+02 0.0099 22.6 16.0 33 136-168 36-68 (143)
217 PRK10929 putative mechanosensi 24.4 1.3E+03 0.028 27.7 42.0 15 11-25 23-37 (1109)
218 COG4026 Uncharacterized protei 23.9 5.9E+02 0.013 23.6 9.8 59 250-319 150-208 (290)
219 PF07308 DUF1456: Protein of u 23.6 2.5E+02 0.0054 20.7 5.1 32 473-509 14-45 (68)
220 TIGR02168 SMC_prok_B chromosom 23.5 1.3E+03 0.029 27.6 42.0 17 415-431 993-1009(1179)
221 KOG0933|consensus 23.5 1.2E+03 0.026 27.2 36.0 110 96-206 700-812 (1174)
222 KOG4403|consensus 23.3 1.1E+02 0.0024 31.1 4.1 61 492-555 63-123 (575)
223 PF10168 Nup88: Nuclear pore c 23.0 1.1E+03 0.024 26.6 21.2 77 133-213 534-611 (717)
224 PF14942 Muted: Organelle biog 22.8 5E+02 0.011 22.4 9.7 57 151-207 68-126 (145)
225 COG1283 NptA Na+/phosphate sym 22.6 9.9E+02 0.021 25.8 11.6 42 14-56 345-386 (533)
226 PRK02224 chromosome segregatio 22.6 1.2E+03 0.027 26.9 38.8 316 7-360 408-731 (880)
227 KOG3647|consensus 22.0 7E+02 0.015 23.8 9.8 27 306-332 130-156 (338)
228 COG0419 SbcC ATPase involved i 21.8 1.3E+03 0.029 26.9 39.3 30 178-207 340-369 (908)
229 PF12795 MscS_porin: Mechanose 21.3 7E+02 0.015 23.5 20.9 86 45-130 54-142 (240)
230 cd07665 BAR_SNX1 The Bin/Amphi 21.0 7.1E+02 0.015 23.5 24.0 82 110-201 17-100 (234)
231 PLN02228 Phosphoinositide phos 20.6 2.8E+02 0.006 30.1 6.8 64 531-596 21-93 (567)
232 KOG3647|consensus 20.5 7.6E+02 0.016 23.6 15.8 55 181-235 126-180 (338)
233 KOG1937|consensus 20.3 9.9E+02 0.021 24.9 28.9 28 181-208 307-334 (521)
234 smart00502 BBC B-Box C-termina 20.2 4.8E+02 0.01 21.2 12.9 34 179-212 37-70 (127)
235 PLN02222 phosphoinositide phos 20.2 3.3E+02 0.0071 29.7 7.2 64 456-525 25-90 (581)
236 PF11802 CENP-K: Centromere-as 20.1 7.9E+02 0.017 23.7 12.3 94 249-362 52-145 (268)
No 1
>KOG0517|consensus
Probab=100.00 E-value=6.6e-51 Score=437.13 Aligned_cols=449 Identities=27% Similarity=0.441 Sum_probs=413.4
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHhhhhccCCchHHHHHHHHHHHHHhHHhHHhcCCCCCCCCCCCchhHHHHHHHHHHHhH
Q psy12562 3 WLQSRQTDNSLSGVQKKLEEYRTYRRKHKPPRVEQKAKLETNFNTLQTKLRLSNRPAYMPTEGKMVSDIANAWKGLETSE 82 (599)
Q Consensus 3 ~l~~~~~~~~~~~v~~~l~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~l~~~~~~~~~~~~~~~~~~l~~~w~~L~~~~ 82 (599)
.|++|+||+|+.||+++|.+|+.|++.+|||++++++.||..+++++++++++|+++|.|+.|+.+.+|++.|..|+.+.
T Consensus 317 ~L~~R~f~NSL~GvqqqL~aF~~yRT~EKPPKf~EKG~lEvLlFtiQsklrA~Nqk~y~P~eG~li~DInkAW~~LE~AE 396 (2473)
T KOG0517|consen 317 TLESRKFPNSLEGVQQQLAAFNTYRTVEKPPKFQEKGNLEVLLFTIQSKLRANNQKPYTPREGKLISDINKAWERLEKAE 396 (2473)
T ss_pred HHhhccCccchHHHHHHHHHHHhhhcccCCCccccccchHHHHHHHHHHHHHcCCCCCCCCccchHHHHHHHHHHHHHHH
Confidence 58899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhHHhhHHHHHHHH
Q psy12562 83 KSFEEWLLSEMMRLERLEHLAQKFKHKADIHEDWTRGKEEMLQSSDFRQCKLNELKALKKKHEAFESDLAAHQDRVEQIA 162 (599)
Q Consensus 83 ~~r~~~L~~~~~rl~~l~~l~~~f~~~~~~~~~Wl~~~e~~l~~~~~~~~~l~~v~~~l~~h~~~~~el~~~~~~v~~l~ 162 (599)
.+|+.+|+..+.|+++|++|+.+|.+++..-++||.+.+..++.+.+| .|+..|++.++||++++++|.+++.+|+.|.
T Consensus 397 heRe~ALr~ELiRQEKLEqLA~RFdrKAamREtwL~enqrlvsqdnfg-~~LaaVEAa~KKheAIetDI~AyeeRvqal~ 475 (2473)
T KOG0517|consen 397 HERELALRAELIRQEKLEQLARRFDRKAAMRETWLKENQRLVSQDNFG-YDLAAVEAALKKHEAIETDILAYEERVQALV 475 (2473)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccC-ccHHHHHHHHHHhhhhhhhHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999997 6999999999999999999999999999999
Q ss_pred HHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----H-----------------
Q psy12562 163 AIAQELNTLEYHDSVSVNARCQRICDQWDHLGALTQQRRHALDEAEKILEKIDILHL-----E----------------- 220 (599)
Q Consensus 163 ~~~~~L~~~~~~~~~~i~~~~~~l~~rw~~L~~~~~~R~~~L~~~~~~~q~~~~~~~-----~----------------- 220 (599)
++++.|...+|++...|..+-+.|-.+|..|..++..|+.+|...+..+.-+..+.. +
T Consensus 476 ava~eL~~E~YHd~~rV~~r~~~V~~~W~~Ll~lL~arR~rL~~~~~Lqklfqem~~~~d~meElk~~l~S~d~GkHL~g 555 (2473)
T KOG0517|consen 476 AVADELEAENYHDIKRVAARKDNVLRLWTYLLELLEARRQRLEQMLALQKLFQEMLYTSDWMEELKQQLLSRDVGKHLLG 555 (2473)
T ss_pred HHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhh
Confidence 999999999999999999999999999999999999999999998877664433210 0
Q ss_pred -------------------------------------------------------------------------------H
Q psy12562 221 -------------------------------------------------------------------------------F 221 (599)
Q Consensus 221 -------------------------------------------------------------------------------f 221 (599)
|
T Consensus 556 VedLLQkH~LlEadIn~~gerv~~~~a~a~~f~~~~~~~~cdp~vi~~R~~~le~~y~eL~~laa~RRarLE~sr~l~~F 635 (2473)
T KOG0517|consen 556 VEDLLQKHDLLEADINAQGERVKALNAQALRFDSPKEYKPCDPQVIQERVAHLEQCYQELVELAAARRARLEESRRLWQF 635 (2473)
T ss_pred HHHHHHhhhhHHhHHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9
Q ss_pred HHhhhhhhhhhhhhHHHhhHHHHhhcHHHHHHHHHHhHHHHhhHHHHHHHHhHHHHHHHHHHHHHHhhcCCCCCCCCCCC
Q psy12562 222 AKRAAPFNNWLDGTREDLVDMFIVHTMEEIQGLIDAHSQFKATLGEADKEYNSIVNLVREVESTVQQYQIPGGLENPYTA 301 (599)
Q Consensus 222 ~~~~~~l~~Wl~~~~~~l~~~~~~~~~~~v~~ll~~h~~l~~el~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~ 301 (599)
..++.+.++||.+++..+++.++|.|+.+|-.++.+|++|+.+|..+.+....+..-|.. ++...++ ..+.|.
T Consensus 636 ~~d~~EeEaWlkEkeqi~~sa~~g~DLs~v~~ll~kHKalE~E~~~~~a~~~~~~~~G~~---Lvae~~p----g~~~i~ 708 (2473)
T KOG0517|consen 636 LWDVEEEEAWLKEKEQILSSADTGRDLSSVLRLLQKHKALEDEMRGRDAHLKQMIREGEE---LVAEGHP----GSDQIQ 708 (2473)
T ss_pred HHHHHHHHHHHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHH---HHhcCCC----CCCcHH
Confidence 999999999999999999999999999999999999999999999999887777777776 5554432 566788
Q ss_pred CChHHHHHHHHHHHHhhHhHhHHHHHHHHhhcchHHHHHHHHHHhchhhhhHHHHHHHHhhhhccCC-CCHHHHHHHHHH
Q psy12562 302 LTANDLTKKWTDVRKLVPQRDTTLQAELRKQQNNETLRRQFAEKANQVGPWIERQMDAVTSIGMGLQ-GSLEDQLHRLKE 380 (599)
Q Consensus 302 ~~~~~l~~~w~~L~~~~~~R~~~L~~~l~~~~~~~~l~~~f~~~~~~~~~Wl~e~~~~l~~~~~~~~-~~~e~~~~~~~~ 380 (599)
.++..+..+|+.|..++..|+++|++|.. +++|+.+++++.+||.++...+++.++|.+ ++++.++++|.+
T Consensus 709 ~R~~~i~~~W~~L~~l~~~r~~rL~~A~~--------~~QffaDAdd~~sWl~d~~rlvss~d~G~DE~saq~LlkrH~~ 780 (2473)
T KOG0517|consen 709 ERAAEIREQWQRLEALVAGRGRRLQEARE--------LYQFFADADDAESWLRDALRLVSSEDVGHDEASAQALLKRHRD 780 (2473)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------HHHHhccHHHHHHHHHHHHHhccchhcCCchHHHHHHHHHHHH
Confidence 99999999999999999999999999998 777999999999999999999999999985 999999999999
Q ss_pred HHhhhhccccchHHHHHHHHHHhhcccccCCCccc---cHHHHHHHHHHHHHHHHHHHHHHHHHHHh-------------
Q psy12562 381 YEQGVYAYKPHIEELEKIHQAVQEGMIFENRYTQY---TMETLRVGWEQLLTSINRNINEVENQILT------------- 444 (599)
Q Consensus 381 ~~~ei~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~---~~~~l~~~w~~l~~~~~~r~~~Le~~~~~------------- 444 (599)
+..||.++.+.+..|.+.+..|... ..+.|.+.. +++.+...|..+..+..-|...|+.++..
T Consensus 781 l~~El~a~~~~i~~L~eQa~~l~~~-~~e~p~V~~~~~R~~~i~q~Y~El~~lA~lRrq~L~dalaLy~~~se~d~~ElW 859 (2473)
T KOG0517|consen 781 LEEELRAYRGDIDRLEEQASALPQE-SPEGPEVRQPLQRQDTISQDYEELQELAQLRRQRLEDALALYGFYSECDACELW 859 (2473)
T ss_pred HHHHHHHhhhHHHHHHHHHHhhccc-cCCCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHH
Confidence 9999999999999999999999874 567788887 99999999999999999999999975422
Q ss_pred --------hhc-cCCCHHHHHHHHHHHHhhcCC
Q psy12562 445 --------RDS-KGITQEQLNEFRASFNHFDKN 468 (599)
Q Consensus 445 --------~~~-~~~~~~~~~~~~~~F~~~d~~ 468 (599)
..+ .+-+.+.++.++.-|..|+++
T Consensus 860 i~Eke~~L~~m~~~~~~E~vev~q~rFe~l~~e 892 (2473)
T KOG0517|consen 860 IKEKEKWLATMSPPDSLEDVEVMQHRFEKLEQE 892 (2473)
T ss_pred HHHHHHHHhccCCCCChhHHHHHHHHHHHHHHH
Confidence 111 145678888899999999876
No 2
>KOG0040|consensus
Probab=100.00 E-value=2.3e-49 Score=417.20 Aligned_cols=558 Identities=28% Similarity=0.499 Sum_probs=493.9
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhhhhccCCchHHHHHHHHHHHHHhHHhHHhcC---------CCCCCCCCCCchhHHHHH
Q psy12562 4 LQSRQTDNSLSGVQKKLEEYRTYRRKHKPPRVEQKAKLETNFNTLQTKLRLSN---------RPAYMPTEGKMVSDIANA 74 (599)
Q Consensus 4 l~~~~~~~~~~~v~~~l~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~l~~~~---------~~~~~~~~~~~~~~l~~~ 74 (599)
|.+.+++.++.+|..+|.++... +..+.....++..++ .......+......++++
T Consensus 1613 l~~ed~~kdLasv~nlLkkhqll---------------e~di~a~ed~~kd~n~qadSll~s~~f~~~~i~dkr~~i~~r 1677 (2399)
T KOG0040|consen 1613 LASEDYGKDLASVGNLLKKHQLL---------------EADIVAHEDRLKDLNTQADSLLESGQFDTDQIVEKRDNINKR 1677 (2399)
T ss_pred HhhhHHHHHHHHHHHHHHHHHHH---------------HHHHHHHHHHHhhhhHHHHHHHhhcccchhhHHHHHHHHHHH
Confidence 56788899999999999966554 333333333333333 333456777778889999
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhHHhh
Q psy12562 75 WKGLETSEKSFEEWLLSEMMRLERLEHLAQKFKHKADIHEDWTRGKEEMLQSSDFRQCKLNELKALKKKHEAFESDLAAH 154 (599)
Q Consensus 75 w~~L~~~~~~r~~~L~~~~~rl~~l~~l~~~f~~~~~~~~~Wl~~~e~~l~~~~~~~~~l~~v~~~l~~h~~~~~el~~~ 154 (599)
...+....+.|+..|.+++. |. +|+++....++||.++.-.+.+.++| .++..|+.+.++|+.+++++.+|
T Consensus 1678 ~~~V~~laa~~r~kl~ea~~-------L~-qff~d~~Deeswikek~l~V~sedyg-rdl~gVqnl~kkhkrle~el~~h 1748 (2399)
T KOG0040|consen 1678 FLNVKELAAARRAKLNEALA-------LH-QFFRDIDDEESWIKEKKLLVSSDDYG-RDLTGVQNLRKKHKRLEAELAAH 1748 (2399)
T ss_pred HHHHHHHHHHHHHHHHHHHH-------HH-HHhhhhhhHHHHHHHHHHhccchhhc-ccchhhHHHHHHhchhhhhhhhc
Confidence 99999999999888887764 44 99999999999999999999999997 89999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhh
Q psy12562 155 QDRVEQIAAIAQELNTLEYHDSVSVNARCQRICDQWDHLGALTQQRRHALDEAEKILEKIDILHLEFAKRAAPFNNWLDG 234 (599)
Q Consensus 155 ~~~v~~l~~~~~~L~~~~~~~~~~i~~~~~~l~~rw~~L~~~~~~R~~~L~~~~~~~q~~~~~~~~f~~~~~~l~~Wl~~ 234 (599)
++.++.|...|++|..........|..++..+...|..|..+...|...|..++..++ |..++++.+.|+.+
T Consensus 1749 epaiQ~v~~~~ekl~d~a~vg~~ei~~rl~~~~~~w~~lk~la~~r~~~l~es~~~Q~--------f~~~~eeeEaWine 1820 (2399)
T KOG0040|consen 1749 EPAIQNVLDMGEKLKDKAAVGVEEIQQRLAQFVEHWEELKELAAARGQKLEESLEYQQ--------FLANVEEEEAWINE 1820 (2399)
T ss_pred cHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhHHHH--------HHHHHHHHHHHHHH
Confidence 9999999999999996666666779999999999999999999999999999999999 99999999999999
Q ss_pred hHHHhhHHHHhhcHHHHHHHHHHhHHHHhhHHHHHHHHhHHHHHHHHHHHHHH-----------hhcCCCCC--------
Q psy12562 235 TREDLVDMFIVHTMEEIQGLIDAHSQFKATLGEADKEYNSIVNLVREVESTVQ-----------QYQIPGGL-------- 295 (599)
Q Consensus 235 ~~~~l~~~~~~~~~~~v~~ll~~h~~l~~el~~~~~~~~~~~~l~~~l~~~~~-----------~~~~~~~~-------- 295 (599)
+...+.+.++|..++.|+.|+.+|.+|+.+...++.+|..+..-+..+..... ......+.
T Consensus 1821 k~~l~~~~d~gd~laaiq~Ll~kh~a~e~d~~~hK~rV~~~~~~g~dll~~~~h~~~~I~sk~~~l~~k~~~l~~~~~~~ 1900 (2399)
T KOG0040|consen 1821 KQQLLVSEDYGDTLAAVQGLLKKHEAFETDFTVHKDRVQDVCAQGEDLINKVNHHEEQISSKCEQLNEKLPSLEKAAAAR 1900 (2399)
T ss_pred HHHHHHhhhhHhHHHHHHHHHhcCchHHHHHHHHHHHHHHHHhchHHHHHHhhhhhhHHHHHHHHHhhcchhHHHHHHhH
Confidence 99999999999999999999999999999999999888776666554422211 11100000
Q ss_pred --------------------------------------------------------------------------------
Q psy12562 296 -------------------------------------------------------------------------------- 295 (599)
Q Consensus 296 -------------------------------------------------------------------------------- 295 (599)
T Consensus 1901 k~kl~dn~a~~qf~wk~dVveswi~~ke~~~k~e~~G~dl~~~q~ll~kQ~T~dasl~aF~QE~~~~itelkdql~~a~h 1980 (2399)
T KOG0040|consen 1901 KAQLEDNSAFLQFNWKADVVESWIADKENSLKTDDFGRDLSSVQTLLTKQETFDAGLQAFQQEGIPNITALKDQLISAQH 1980 (2399)
T ss_pred HHhhhhhHHHHHhhhhhhhhHHhhhhHHHHHHhhhhhhhHHhhhhHhhHHHHHHhhhhhhHHHhHhhHHHHHHHHHHHHh
Confidence
Q ss_pred --------------------------------------------------------------------------------
Q psy12562 296 -------------------------------------------------------------------------------- 295 (599)
Q Consensus 296 -------------------------------------------------------------------------------- 295 (599)
T Consensus 1981 nQSdAi~kr~l~l~~rw~~l~~~s~~~~kkLLe~Q~~fkk~ee~~l~faKkaSafNwwfenaEE~l~~~~~~ns~~Ei~~ 2060 (2399)
T KOG0040|consen 1981 NQSKAIEKRHAALIKRWQQLLAASAARRQKLLEMQSQFRKIEDLFLTFAKKASAFNSWFENAEEDLTDPVRCNSLEEIRA 2060 (2399)
T ss_pred cccHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHhhHhcccccccccchHHHHH
Confidence
Q ss_pred -----------------------------------CCCCCCCChHHHHHHHHHHHHhhHhHhHHHHHHHHhhcchHHHHH
Q psy12562 296 -----------------------------------ENPYTALTANDLTKKWTDVRKLVPQRDTTLQAELRKQQNNETLRR 340 (599)
Q Consensus 296 -----------------------------------~~~~~~~~~~~l~~~w~~L~~~~~~R~~~L~~~l~~~~~~~~l~~ 340 (599)
.+||++.++..|..+|.+|...+.+|.+-|.....|+..|+++|+
T Consensus 2061 l~~~h~~f~~sls~a~~df~~l~~ld~~iks~~v~~~pytw~t~e~Le~tw~~L~~iI~eR~~el~~E~~Rq~~N~klc~ 2140 (2399)
T KOG0040|consen 2061 LRDAHEDFQASLSSAQADFKQLAELDQQIKSFNVGSNPYTWFTMEALEETWRNLQQIISERERELDKEISRQEENDKLCE 2140 (2399)
T ss_pred HHHHHHHHHHHHhhchhhHHHHHHHHHHHHhcCCCCCCceeehHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHH
Confidence 677888889999999999999999999999999999999999999
Q ss_pred HHHHHhchhhhhHHHHHHHHhhhhccCCCCHHHHHHHHHHHHhhhhccccchHHHHHHHHHHhhcccccCCCccccHHHH
Q psy12562 341 QFAEKANQVGPWIERQMDAVTSIGMGLQGSLEDQLHRLKEYEQGVYAYKPHIEELEKIHQAVQEGMIFENRYTQYTMETL 420 (599)
Q Consensus 341 ~f~~~~~~~~~Wl~e~~~~l~~~~~~~~~~~e~~~~~~~~~~~ei~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~l 420 (599)
+|...++.+..||.+....+.. +..++++.+++.+..+..+|.+.+..+..|..++..|...++.+|.++..+...+
T Consensus 2141 efa~~a~tfh~wi~etr~el~~---~~sgtLE~Qleal~~k~~evqa~rg~l~~ie~~g~lmE~~lIldnkyt~~st~Gl 2217 (2399)
T KOG0040|consen 2141 EFACTANTFHQWIVETRKELED---GESGTLEDQLEALKRKIKEVQAMRGQLQKIEKLGALMESRLILDNKYTEHSTVGL 2217 (2399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHh---hccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHhhcccccccCchHH
Confidence 9999999999999999998865 3568999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhccCCCHHHHHHHHHHHHhhcCCCCCCcCHHHHHHHHHHcCCCCCC--CCCCHHH
Q psy12562 421 RVGWEQLLTSINRNINEVENQILTRDSKGITQEQLNEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGK--DRQGEID 498 (599)
Q Consensus 421 ~~~w~~l~~~~~~r~~~Le~~~~~~~~~~~~~~~~~~~~~~F~~~d~~~~g~l~~~e~~~~l~~~g~~~~~--~~~~~~~ 498 (599)
.+.|+++.+++.+.++.||++|..++..++|.+.+.+|.-+|++||++++|.++..+|+.|++++||+++. .+++++.
T Consensus 2218 aqqwdQl~qL~~rMqhnlEQqIqarn~~GVtEe~L~EFs~~fkhFDkek~G~Ldhq~F~sCLrslgY~lpmvEe~~~~p~ 2297 (2399)
T KOG0040|consen 2218 AQQWDQLDQLMMRMQHNLEQQIQARNHNGVTEEQLKEFSMMFKHFDKEKNGRLDHQHFKSCLRSLGYDLPMVEEGEPEPE 2297 (2399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHhchhhccCCcHHHHHHHHHhcCCCCcccccCCCChh
Confidence 99999999999999999999999999999999999999999999999999999999999999999998865 4667889
Q ss_pred HHHHHHHhCCCCCCccchHHHHHHHhhh-cCCCCCHHHHHHHHHhhhCCCCCcCHHHHhccCCcchHHHHHHhcCCCCCC
Q psy12562 499 FQRILAVVDPNSTGYVHFDAFLDFMTRE-STDTDTAEQVIDSFRILAGDKPYILPDELRRELPPDQAEYCIQRMPPYKGP 577 (599)
Q Consensus 499 ~~~~~~~~d~~~~g~I~~~eF~~~~~~~-~~~~~~~~~~~~~F~~~D~d~G~it~~el~~~l~~~~~~~~~~~~~~~~d~ 577 (599)
++.++..+||+.+|+|+..+|+.+|+.. .....+.+.+..||+.+|.+.+|||..++...||++++++|+.+|.+.+++
T Consensus 2298 fe~~ld~vDP~r~G~Vsl~dY~afmi~~ETeNI~s~~eIE~AfraL~a~~~yvtke~~~~~ltreqaefc~s~m~~~~e~ 2377 (2399)
T KOG0040|consen 2298 FEEILDLVDPNRDGYVSLQDYMAFMISKETENILSSEEIEDAFRALDAGKPYVTKEELYQNLTREQAEFCMSKMKPYAET 2377 (2399)
T ss_pred HHHHHHhcCCCCcCcccHHHHHHHHHhcccccccchHHHHHHHHHhhcCCccccHHHHHhcCCHHHHHHHHHHhhhhccc
Confidence 9999999999999999999999999865 344456789999999999998999999999999999999999999998887
Q ss_pred C---CCCCCccHHHHHHHhhcC
Q psy12562 578 N---AIPGALDYQSFSTALYGE 596 (599)
Q Consensus 578 ~---~~dg~i~~~eF~~~~~~~ 596 (599)
. ...+.++|.+|++.+|-+
T Consensus 2378 ~~~~s~q~~l~y~dfv~sl~~~ 2399 (2399)
T KOG0040|consen 2378 SSGRSDQVALDYKDFVNSLFVN 2399 (2399)
T ss_pred ccCCCccccccHHHHHHHHhcC
Confidence 5 224579999999999853
No 3
>KOG0517|consensus
Probab=100.00 E-value=1.2e-40 Score=358.48 Aligned_cols=403 Identities=20% Similarity=0.287 Sum_probs=364.7
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhhhhccCCchHHHHHHHHHHHHHhHHhHHhcC--CCCCCCCCC---CchhHHHHHHHHH
Q psy12562 4 LQSRQTDNSLSGVQKKLEEYRTYRRKHKPPRVEQKAKLETNFNTLQTKLRLSN--RPAYMPTEG---KMVSDIANAWKGL 78 (599)
Q Consensus 4 l~~~~~~~~~~~v~~~l~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~l~~~~--~~~~~~~~~---~~~~~l~~~w~~L 78 (599)
|-|+++|..+.+|..+|+ .|..+|..|+..+.++++++ +..|..|.+ +.|.-|..+-..|
T Consensus 544 l~S~d~GkHL~gVedLLQ---------------kH~LlEadIn~~gerv~~~~a~a~~f~~~~~~~~cdp~vi~~R~~~l 608 (2473)
T KOG0517|consen 544 LLSRDVGKHLLGVEDLLQ---------------KHDLLEADINAQGERVKALNAQALRFDSPKEYKPCDPQVIQERVAHL 608 (2473)
T ss_pred HHhHHHHHHHhhHHHHHH---------------hhhhHHhHHHHHHHHHHHHHHHHhhcCCCCCCCCCCHHHHHHHHHHH
Confidence 457889999999999888 67788999999999999998 334444333 4566699999999
Q ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhHHhhHHHH
Q psy12562 79 ETSEKSFEEWLLSEMMRLERLEHLAQKFKHKADIHEDWTRGKEEMLQSSDFRQCKLNELKALKKKHEAFESDLAAHQDRV 158 (599)
Q Consensus 79 ~~~~~~r~~~L~~~~~rl~~l~~l~~~f~~~~~~~~~Wl~~~e~~l~~~~~~~~~l~~v~~~l~~h~~~~~el~~~~~~v 158 (599)
..+..+.......+..||++..+++ +|.+++++.++||.+++..+.+.++| .|+.+|-.++.+|++|+.||.++.+.+
T Consensus 609 e~~y~eL~~laa~RRarLE~sr~l~-~F~~d~~EeEaWlkEkeqi~~sa~~g-~DLs~v~~ll~kHKalE~E~~~~~a~~ 686 (2473)
T KOG0517|consen 609 EQCYQELVELAAARRARLEESRRLW-QFLWDVEEEEAWLKEKEQILSSADTG-RDLSSVLRLLQKHKALEDEMRGRDAHL 686 (2473)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhhccccc-ccHHHHHHHHHHHHHHHHHHhcchhHH
Confidence 9987777777777788899999999 99999999999999999999998886 899999999999999999999999999
Q ss_pred HHHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhHHH
Q psy12562 159 EQIAAIAQELNTLEYHDSVSVNARCQRICDQWDHLGALTQQRRHALDEAEKILEKIDILHLEFAKRAAPFNNWLDGTRED 238 (599)
Q Consensus 159 ~~l~~~~~~L~~~~~~~~~~i~~~~~~l~~rw~~L~~~~~~R~~~L~~~~~~~q~~~~~~~~f~~~~~~l~~Wl~~~~~~ 238 (599)
..+...|..|+..+||.++.|..|+..+..+|+.|..++..|+.+|+++...+| |..+|+++.+||.++...
T Consensus 687 ~~~~~~G~~Lvae~~pg~~~i~~R~~~i~~~W~~L~~l~~~r~~rL~~A~~~~Q--------ffaDAdd~~sWl~d~~rl 758 (2473)
T KOG0517|consen 687 KQMIREGEELVAEGHPGSDQIQERAAEIREQWQRLEALVAGRGRRLQEARELYQ--------FFADADDAESWLRDALRL 758 (2473)
T ss_pred HHHHHHHHHHHhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------HhccHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999999999999 999999999999999999
Q ss_pred hhHHHHhhcHHHHHHHHHHhHHHHhhHHHHHHHHhHHHHHHHHHHHHHHhhcCCCCCCCCCCCC---ChHHHHHHHHHHH
Q psy12562 239 LVDMFIVHTMEEIQGLIDAHSQFKATLGEADKEYNSIVNLVREVESTVQQYQIPGGLENPYTAL---TANDLTKKWTDVR 315 (599)
Q Consensus 239 l~~~~~~~~~~~v~~ll~~h~~l~~el~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~---~~~~l~~~w~~L~ 315 (599)
+++.++|.|-.+++.++++|..++.+|.++.+.+..+...+.. +.... .+.+.+.. +...+...|..|.
T Consensus 759 vss~d~G~DE~saq~LlkrH~~l~~El~a~~~~i~~L~eQa~~---l~~~~-----~e~p~V~~~~~R~~~i~q~Y~El~ 830 (2473)
T KOG0517|consen 759 VSSEDVGHDEASAQALLKRHRDLEEELRAYRGDIDRLEEQASA---LPQES-----PEGPEVRQPLQRQDTISQDYEELQ 830 (2473)
T ss_pred ccchhcCCchHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHh---hcccc-----CCCcccccHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999866655544444 44432 24566666 8999999999999
Q ss_pred HhhHhHhHHHHHHHHhhcchHHHHHHHHHHhchhhhhHHHHHHHHhhhhccC-CCCHHHHHHHHHHHHhhhhccccchHH
Q psy12562 316 KLVPQRDTTLQAELRKQQNNETLRRQFAEKANQVGPWIERQMDAVTSIGMGL-QGSLEDQLHRLKEYEQGVYAYKPHIEE 394 (599)
Q Consensus 316 ~~~~~R~~~L~~~l~~~~~~~~l~~~f~~~~~~~~~Wl~e~~~~l~~~~~~~-~~~~e~~~~~~~~~~~ei~~~~~~~~~ 394 (599)
.++.-|+++|++++. ||. |+.+|+.+..||.+++..|.....+. ..+++....++..|..+|......+..
T Consensus 831 ~lA~lRrq~L~dala-------Ly~-~~se~d~~ElWi~Eke~~L~~m~~~~~~E~vev~q~rFe~l~~eM~~~~~~v~~ 902 (2473)
T KOG0517|consen 831 ELAQLRRQRLEDALA-------LYG-FYSECDACELWIKEKEKWLATMSPPDSLEDVEVMQHRFEKLEQEMNTLAGRVAE 902 (2473)
T ss_pred HHHHHHHHHHHHHHH-------HHH-HHhhccHHHHHHHHHHHHHhccCCCCChhHHHHHHHHHHHHHHHHHhhhhhHHH
Confidence 999999999999999 666 99999999999999999999876665 599999999999999999999999999
Q ss_pred HHHHHHHHhhcccccCCCccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q psy12562 395 LEKIHQAVQEGMIFENRYTQYTMETLRVGWEQLLTSINRNINEVENQILTRDS 447 (599)
Q Consensus 395 l~~~~~~l~~~~~~~~~~~~~~~~~l~~~w~~l~~~~~~r~~~Le~~~~~~~~ 447 (599)
++.+++.|...+|+.+..|..+.+.|+++|..|..++..+...|+.+.....+
T Consensus 903 Vn~~a~qL~~~ghp~sd~I~~~Q~~Ln~rW~~l~~l~~qk~~~L~~a~~V~~f 955 (2473)
T KOG0517|consen 903 VNDIARQLLEVGHPNSDEILARQDKLNQRWQQLRELVDQKKVALESALRVETF 955 (2473)
T ss_pred HHHHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999997666543
No 4
>KOG0040|consensus
Probab=100.00 E-value=2.1e-31 Score=282.38 Aligned_cols=385 Identities=17% Similarity=0.244 Sum_probs=341.1
Q ss_pred chHHHHHHHHHHHHHhHHhHHhcC--------CCCC-CCCCCCchhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHH
Q psy12562 33 PRVEQKAKLETNFNTLQTKLRLSN--------RPAY-MPTEGKMVSDIANAWKGLETSEKSFEEWLLSEMMRLERLEHLA 103 (599)
Q Consensus 33 ~~~~~~~~le~~l~~~~~~l~~~~--------~~~~-~~~~~~~~~~l~~~w~~L~~~~~~r~~~L~~~~~rl~~l~~l~ 103 (599)
.+++.|.+++.++.+....+..+- ..++ +..+..++.+|...|+-|.....+..-.|..++. +.
T Consensus 80 ~k~qkhqa~eaevqa~s~~i~~ld~t~~~~~~~~h~a~e~~~~~l~el~~lw~~l~~~~~ekg~kl~~al~-------~~ 152 (2399)
T KOG0040|consen 80 GKIQKHQAFEAEVQAHSRAIVELDKTGNEMITMGHFASEEIKARLEELHHLWDLLLEKLLEKGIKLLQALK-------LV 152 (2399)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHhHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHH-------HH
Confidence 566777777777766655444332 3333 3366778888999999999998888887777764 44
Q ss_pred HHHHHHHHHHHhhhhhHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhHHhhHHHHHHHHHHHHHHhhccCCCchhHHHHH
Q psy12562 104 QKFKHKADIHEDWTRGKEEMLQSSDFRQCKLNELKALKKKHEAFESDLAAHQDRVEQIAAIAQELNTLEYHDSVSVNARC 183 (599)
Q Consensus 104 ~~f~~~~~~~~~Wl~~~e~~l~~~~~~~~~l~~v~~~l~~h~~~~~el~~~~~~v~~l~~~~~~L~~~~~~~~~~i~~~~ 183 (599)
+|.+.|++++.||.+++..+.+.+.| .|++.|+-+.++++.|+.++.+++.+|..|++.+.+|++.|||.-+.|+.+.
T Consensus 153 -q~~~~c~~i~~wi~dke~~~t~~e~g-~d~e~~evl~~kf~~f~~~~~~~e~rv~evnq~a~~~~~e~h~e~~~i~~k~ 230 (2399)
T KOG0040|consen 153 -QYLRECEDILEWIGDKEAIVTSEELG-QDLEHVEVLQKKFEDFQKELAAHEYRVNEVNQYADKLVEEGHPELDLIQKKQ 230 (2399)
T ss_pred -HHHHHHHHHHHHhccchheeeHHHhc-ccHHHHHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHHcCCCchHHHHHhH
Confidence 99999999999999999999999897 8999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhHHHhhHHHHhhcHHHHHHHHHHhHHHHh
Q psy12562 184 QRICDQWDHLGALTQQRRHALDEAEKILEKIDILHLEFAKRAAPFNNWLDGTREDLVDMFIVHTMEEIQGLIDAHSQFKA 263 (599)
Q Consensus 184 ~~l~~rw~~L~~~~~~R~~~L~~~~~~~q~~~~~~~~f~~~~~~l~~Wl~~~~~~l~~~~~~~~~~~v~~ll~~h~~l~~ 263 (599)
+.|+..|+.|..++..|+..|-.+-..+. |.+++++..+|+.+++..|+|.++|.|+.+|++++++|+.+++
T Consensus 231 ~evn~aw~rl~~la~~rq~~l~~a~~~qr--------f~rd~~et~~wi~ek~~~l~sddygrdl~~~q~l~~~h~g~er 302 (2399)
T KOG0040|consen 231 DEVNAAWQRLKGLALQRQEKLFGAAEVQR--------FNRDVDETIAWIKEKEPVLSSDDYGRDLASVQALQRKHEGLER 302 (2399)
T ss_pred HHHHHHHHHHHHHHHHHHHhhccHHHHHH--------hcccHHHHHHHHhhccccccccccchhHHHHHHHHHhccchhh
Confidence 99999999999999999999999988888 9999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHhHHHHHHHHHHHHHHhhcCCCCCCCCCCCCChHHHHHHHHHHHHhhHhHhHHHHHHHHhhcchHHHHHHHH
Q psy12562 264 TLGEADKEYNSIVNLVREVESTVQQYQIPGGLENPYTALTANDLTKKWTDVRKLVPQRDTTLQAELRKQQNNETLRRQFA 343 (599)
Q Consensus 264 el~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~w~~L~~~~~~R~~~L~~~l~~~~~~~~l~~~f~ 343 (599)
+|.+.+..+..+ +.....++.+ .+.+++.|...-..+-..|+.+...+..|...|+...- ++.|.
T Consensus 303 dla~l~~kv~~l---~~~a~~l~~~----hp~~a~qi~~~~~~~~~~w~~~~~~a~~r~~~l~~s~~--------~hrf~ 367 (2399)
T KOG0040|consen 303 DLAALEDKVKEL---CAEAEKLTLS----HPDDAPQIQEKKEDLVSSWEHIRTLATERKEKLQASYW--------LHRFL 367 (2399)
T ss_pred hHHHHHHHHHHH---HHHHHHHHhc----CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHH--------HHHHh
Confidence 999999765544 4444445542 23467788888999999999999999999999999998 88899
Q ss_pred HHhchhhhhHHHHHHHHhhhhccC-CCCHHHHHHHHHHHHhhhhccccchHHHHHHHHHHhhcccccCCCccccHHHHHH
Q psy12562 344 EKANQVGPWIERQMDAVTSIGMGL-QGSLEDQLHRLKEYEQGVYAYKPHIEELEKIHQAVQEGMIFENRYTQYTMETLRV 422 (599)
Q Consensus 344 ~~~~~~~~Wl~e~~~~l~~~~~~~-~~~~e~~~~~~~~~~~ei~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~l~~ 422 (599)
++..++..|+.++...++...... ...++.++.+|+.+..+|.++....+.-...|+.+...++...+.++.++..+..
T Consensus 368 ad~rdL~~w~~~~~aaInadel~~dvag~e~lL~~hqEhK~eIds~~dSf~~~~~~gq~l~~~~~~as~ev~ekl~~le~ 447 (2399)
T KOG0040|consen 368 ADFRDLSSWINEMKAAINADELAKDVAGAEALLDRHQEHKGEIDAREDSFKSADESGQKLVEAGHYASDEVREKLEILDN 447 (2399)
T ss_pred hhHHHHHHHHHHHHHHcCchhhHHHHHHHHHHHHHHHHHhhhhHHHHHHHhhhccccHHHHHccccccHHHHHHHHHHhh
Confidence 999999999999999998766555 4889999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhccC
Q psy12562 423 GWEQLLTSINRNINEVENQILTRDSKG 449 (599)
Q Consensus 423 ~w~~l~~~~~~r~~~Le~~~~~~~~~~ 449 (599)
.|..|..++..+...++++........
T Consensus 448 e~~~ll~lwe~r~~~yeqcmd~~lfyr 474 (2399)
T KOG0040|consen 448 EKSALLELWEERRIQYEQCMDLQLFYR 474 (2399)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 999999999999999998766654443
No 5
>KOG0035|consensus
Probab=99.97 E-value=6.7e-32 Score=282.78 Aligned_cols=595 Identities=49% Similarity=0.725 Sum_probs=527.6
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHh--hhhccCCchHHHHHHHHHHHHHhHHhHHhcCCCCCCCCCCCchhHHHHHHHHH
Q psy12562 1 MPWLQSRQTDNSLSGVQKKLEEYRT--YRRKHKPPRVEQKAKLETNFNTLQTKLRLSNRPAYMPTEGKMVSDIANAWKGL 78 (599)
Q Consensus 1 ~~~l~~~~~~~~~~~v~~~l~~~~~--~~~~~~~~~~~~~~~le~~l~~~~~~l~~~~~~~~~~~~~~~~~~l~~~w~~L 78 (599)
+|||..+.-+++....+..|..++. |+..++|++++....++..++.++.+.+..+.+++.+..+..+.+++..|..|
T Consensus 292 ~P~l~~r~~~~~~~~~q~~l~~~rd~~~r~~~~e~~v~~~~~~~~~~st~q~k~~~~~~p~~~~s~~~~~S~~~~~~~~l 371 (890)
T KOG0035|consen 292 TPWLQNRVTDSVGAKAQRKLEFSRDAVYRRLEKEPLVEDKGRLESGFSTLQTKLRLESRPAKLASSGVLVSDINDAWQGL 371 (890)
T ss_pred CcccccccccchhhhhccccccccccccccccccccccccccccccchhhhhhhhhhcccccCcccccccccccccccch
Confidence 5899999999999999999999998 99999999999999999999999999999999999999999999999999999
Q ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhHHhhHHHH
Q psy12562 79 ETSEKSFEEWLLSEMMRLERLEHLAQKFKHKADIHEDWTRGKEEMLQSSDFRQCKLNELKALKKKHEAFESDLAAHQDRV 158 (599)
Q Consensus 79 ~~~~~~r~~~L~~~~~rl~~l~~l~~~f~~~~~~~~~Wl~~~e~~l~~~~~~~~~l~~v~~~l~~h~~~~~el~~~~~~v 158 (599)
+.+....+..+.....+++.++.++..|..++..-+.|...+++.+...+++..-+..+++..+.|.+|+..+..|..++
T Consensus 372 e~~~~~~e~~ll~~~~~l~~~~~~~~~f~~~~s~~~~~~pg~e~~l~~~d~~~~lle~~ke~~~~~ea~~~~~~~~~~~~ 451 (890)
T KOG0035|consen 372 EQAEKLYEESLLAEIRRLERLEHLASKFSQKASLHESWTPGKEQVLFLNDYGQALLEECKELTKKHEAFESDLSAHQDNV 451 (890)
T ss_pred hhhcccccccchhhhHHHhhhhhhhhhccccCchhhhhccchhhhhhhcchHHHHHHHHHhhcccccccccchhhhhcch
Confidence 99999999999999999999999999999999999999999999999999987788999999999999999999999999
Q ss_pred HHHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhHHH
Q psy12562 159 EQIAAIAQELNTLEYHDSVSVNARCQRICDQWDHLGALTQQRRHALDEAEKILEKIDILHLEFAKRAAPFNNWLDGTRED 238 (599)
Q Consensus 159 ~~l~~~~~~L~~~~~~~~~~i~~~~~~l~~rw~~L~~~~~~R~~~L~~~~~~~q~~~~~~~~f~~~~~~l~~Wl~~~~~~ 238 (599)
..+-++++.|....++++..+..+...+.+.|..+-.+..-|+.+|.........+.++...|..++.-+..||+.....
T Consensus 452 e~~~ai~~~~~~~~~~~~~~~a~~~q~i~dq~~~~~~ls~~r~pal~~~~~~~dk~~~~~le~a~Raa~~~~~l~~~~~d 531 (890)
T KOG0035|consen 452 EAFCAIAHELNELLYDDAKLVAADCQHICDQWDDLGQLSRKRRPALMQMEKVLDKLAVLTLEFAKRAAPFNNWLKGVQED 531 (890)
T ss_pred hHHHHHHHHhhhhhhhhhhhhhhhhhhccccccccchhhhhhchhhhhhhhhhHHHHHHHHHHHHHhhhhhhhhhhhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999997777
Q ss_pred hhHHHHhhcHHHHHHHHHHhHHHHhhHHHHHHHHhHHHHHHHHHHHHHHhhcCCCC-CCCCCCCCChHHHHHHHHHHHHh
Q psy12562 239 LVDMFIVHTMEEIQGLIDAHSQFKATLGEADKEYNSIVNLVREVESTVQQYQIPGG-LENPYTALTANDLTKKWTDVRKL 317 (599)
Q Consensus 239 l~~~~~~~~~~~v~~ll~~h~~l~~el~~~~~~~~~~~~l~~~l~~~~~~~~~~~~-~~~~~~~~~~~~l~~~w~~L~~~ 317 (599)
+.+......+-+++.++-.|..|...+-.....-..+.....+....+..++.... ..++++... +...|+.+...
T Consensus 532 ~~d~~~~~~ire~~~~~~a~~~~k~t~p~a~~~~~~~~~e~~e~~~~~~~~~~~~~~~~np~~~~s---~~~~~d~v~~~ 608 (890)
T KOG0035|consen 532 LQDNEISYSIREIQRLRAADLQFKSTLPEADGEGQKISDEEKEREKVSEQLNPKIEPDTNPYTTLS---IYGKWDAVLSS 608 (890)
T ss_pred cccchhccchHhhhccchhhhhhcccCccccchhhhhhhhhhHHHHhhhhcCcccccccccccccc---cccchhhhccc
Confidence 77777777888899999999998877766554444444444555555555554322 345555554 89999999999
Q ss_pred hHhHhHHHHHHHHhhcchHHHHHHHHHHhchhhhhHHHHHHHHhhhhccCCCCHHHHHHHHHHHHhhhhccccchHHHHH
Q psy12562 318 VPQRDTTLQAELRKQQNNETLRRQFAEKANQVGPWIERQMDAVTSIGMGLQGSLEDQLHRLKEYEQGVYAYKPHIEELEK 397 (599)
Q Consensus 318 ~~~R~~~L~~~l~~~~~~~~l~~~f~~~~~~~~~Wl~e~~~~l~~~~~~~~~~~e~~~~~~~~~~~ei~~~~~~~~~l~~ 397 (599)
..+|..-+.....+++.+..+...|.+.++-...|+.......+....+..++++.++.+++....-+..+.+....+..
T Consensus 609 ~~~~~~~~~~~~~~q~~~~s~~~~~~q~an~~~p~vp~~~~e~s~~~~~~~gt~e~~~~rLr~~~~~~~~~k~~~~~~~~ 688 (890)
T KOG0035|consen 609 VPDRDSIEANVHARQQPNESLRRVFAQQANLDGPWVPAKMEESSRININDQGTLEDRLERLRETEERSMNYKSNGDLLAK 688 (890)
T ss_pred ccccchhhHHHHHhhccCccccccccccccCCCcccCchhhcccccccccCCCHHHHHHHHHHHHHHhhccCcchhHHHH
Confidence 99999999999999999999999999999999999999888877666667899999999999999998889999999999
Q ss_pred HHHHHhhcccccCCCccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCHHHHHHHHHHHHhhcCCCCCCcCHHH
Q psy12562 398 IHQAVQEGMIFENRYTQYTMETLRVGWEQLLTSINRNINEVENQILTRDSKGITQEQLNEFRASFNHFDKNRTGRLAPEE 477 (599)
Q Consensus 398 ~~~~l~~~~~~~~~~~~~~~~~l~~~w~~l~~~~~~r~~~Le~~~~~~~~~~~~~~~~~~~~~~F~~~d~~~~g~l~~~e 477 (599)
.++.+.+..++++......++.+...|+.+...+.......+..+..+.....+.....+++..|+.+++...|.++.++
T Consensus 689 ~~q~~~~~~~~~~~~~~~~~e~~~~g~e~~~~~~~~~~~~~en~il~R~sk~~sQ~v~~ElrAle~~~~~~d~~aa~~e~ 768 (890)
T KOG0035|consen 689 QHQLMQEDIIFENKHTRYTMEDLKVGWEELLTIIERTINESENEILERDSKGTSQYVLDELRALENEQDKIDGGAASPEE 768 (890)
T ss_pred HHHHhhhhccccccccccchhhccccccccccccccccccHHHHHHHhcccchhHHHHHHHHHHHhHHHHhhcccCCHHH
Confidence 99999998888888999999999999999999999998999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCCCCCCHHHHHHHHHHhCCCCCCccchHHHHHHHhhhcCCCCCHHHHHHHHHhhhCCCCCcCHHHHhc
Q psy12562 478 FKSCLVSLGYSIGKDRQGEIDFQRILAVVDPNSTGYVHFDAFLDFMTRESTDTDTAEQVIDSFRILAGDKPYILPDELRR 557 (599)
Q Consensus 478 ~~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~~F~~~D~d~G~it~~el~~ 557 (599)
|..|+..+|++...+.....++..++...|+++-|.|+|.+|...|............+..+|...-++.-+|..+||..
T Consensus 769 ~~~~Lmslg~~~e~ee~~~~e~~~lvn~~n~l~~~qv~~~e~~ddl~R~~e~l~~~~r~i~s~~d~~ktk~~lL~eEL~~ 848 (890)
T KOG0035|consen 769 LLRCLMSLGYNTEEEEQGIAEWFRLVNKKNPLIQGQVQLLEFEDDLEREYEDLDTELRAILAFEDWAKTKAYLLLEELVR 848 (890)
T ss_pred HHHHHHhcCcccchhHHHHHHHHHHHhccCcccccceeHHHHHhHhhhhhhhhcHHHHHHHHHHHHHcchhHHHHHHHHh
Confidence 99999999998732222234455566667777779999999999998877777778899999999998855999999999
Q ss_pred cCCcchHHHHHHhcCCCCCCCCCCCCccHHHHHHHhhcCCC
Q psy12562 558 ELPPDQAEYCIQRMPPYKGPNAIPGALDYQSFSTALYGESD 598 (599)
Q Consensus 558 ~l~~~~~~~~~~~~~~~~d~~~~dg~i~~~eF~~~~~~~~~ 598 (599)
-..+...++++.+|+...+...--|.++|..|...++....
T Consensus 849 ~~d~lv~d~~~~e~~~~~~~~~~~r~Ld~~~~s~~~~~e~~ 889 (890)
T KOG0035|consen 849 ERDELVRDLDIQEMAAYDEDERLPRGLDQVKFSSSLYEERC 889 (890)
T ss_pred hccHhhHHHHHHhhcccccCCcccccchHHHHHHHhhhhcc
Confidence 77778888899999776554433567999999999887654
No 6
>COG5126 FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only]
Probab=99.88 E-value=4.6e-22 Score=169.88 Aligned_cols=148 Identities=24% Similarity=0.449 Sum_probs=130.1
Q ss_pred hhhccCCCHHHHHHHHHHHHhhcCCCCCCcCHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhCCCCCCccchHHHHHHH
Q psy12562 444 TRDSKGITQEQLNEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPNSTGYVHFDAFLDFM 523 (599)
Q Consensus 444 ~~~~~~~~~~~~~~~~~~F~~~d~~~~g~l~~~e~~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~ 523 (599)
....+.++.++++++++.|..||++++|.|+..+|..+++.+|+++ +..++..++..+|. |++.|+|.+|+.+|
T Consensus 8 ~~~~~~~t~~qi~~lkeaF~l~D~d~~G~I~~~el~~ilr~lg~~~-----s~~ei~~l~~~~d~-~~~~idf~~Fl~~m 81 (160)
T COG5126 8 LLTFTQLTEEQIQELKEAFQLFDRDSDGLIDRNELGKILRSLGFNP-----SEAEINKLFEEIDA-GNETVDFPEFLTVM 81 (160)
T ss_pred hhhcccCCHHHHHHHHHHHHHhCcCCCCCCcHHHHHHHHHHcCCCC-----cHHHHHHHHHhccC-CCCccCHHHHHHHH
Confidence 3456789999999999999999999999999999999999999999 99999999999998 99999999999999
Q ss_pred hhhcCCCCCHHHHHHHHHhhhCC-CCCcCHHHHhccCC---cchHHHHHHhcCCCCCCCCCCCCccHHHHHHHhhcCCC
Q psy12562 524 TRESTDTDTAEQVIDSFRILAGD-KPYILPDELRRELP---PDQAEYCIQRMPPYKGPNAIPGALDYQSFSTALYGESD 598 (599)
Q Consensus 524 ~~~~~~~~~~~~~~~~F~~~D~d-~G~it~~el~~~l~---~~~~~~~~~~~~~~~d~~~~dg~i~~~eF~~~~~~~~~ 598 (599)
........+.+++..||+.||.| +|+|+..+|+.+++ ....+.-+..|+...++|+ ||.|+|++|+..+...+-
T Consensus 82 s~~~~~~~~~Eel~~aF~~fD~d~dG~Is~~eL~~vl~~lge~~~deev~~ll~~~d~d~-dG~i~~~eF~~~~~~~~~ 159 (160)
T COG5126 82 SVKLKRGDKEEELREAFKLFDKDHDGYISIGELRRVLKSLGERLSDEEVEKLLKEYDEDG-DGEIDYEEFKKLIKDSPT 159 (160)
T ss_pred HHHhccCCcHHHHHHHHHHhCCCCCceecHHHHHHHHHhhcccCCHHHHHHHHHhcCCCC-CceEeHHHHHHHHhccCC
Confidence 98888888899999999999999 99999999999983 2223333334444458888 999999999999987653
No 7
>cd00176 SPEC Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; the repeats are independent folding units; tandem repeats are found in differing numbers and arrange in an antiparallel manner to form dimers; the repeats are defined by a characteristic tryptophan (W) residue in helix A and a leucine (L) at the carboxyl end of helix C and separated by a linker of 5 residues; two copies of the repeat are present here
Probab=99.84 E-value=2.7e-19 Score=169.06 Aligned_cols=211 Identities=27% Similarity=0.482 Sum_probs=190.1
Q ss_pred HHHHHHHHHHHHhhhhhHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhHHhhHHHHHHHHHHHHHHhhccCCCchhHHHH
Q psy12562 103 AQKFKHKADIHEDWTRGKEEMLQSSDFRQCKLNELKALKKKHEAFESDLAAHQDRVEQIAAIAQELNTLEYHDSVSVNAR 182 (599)
Q Consensus 103 ~~~f~~~~~~~~~Wl~~~e~~l~~~~~~~~~l~~v~~~l~~h~~~~~el~~~~~~v~~l~~~~~~L~~~~~~~~~~i~~~ 182 (599)
+.+|...+..+..||.+++..+.+..++ .|+..++.++++|+.|..++..+.+.+..|...|+.|...+++.+..|...
T Consensus 2 ~~~f~~~~~~l~~Wl~~~e~~l~~~~~~-~d~~~~~~~l~~~~~~~~e~~~~~~~~~~l~~~~~~L~~~~~~~~~~i~~~ 80 (213)
T cd00176 2 LQQFLRDADELEAWLSEKEELLSSTDYG-DDLESVEALLKKHEALEAELAAHEERVEALNELGEQLIEEGHPDAEEIQER 80 (213)
T ss_pred HHHHHHhHHHHHHHHHHHHHHhcCcccC-CCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHhcCCCChHHHHHH
Confidence 3589999999999999999999998886 499999999999999999999999999999999999999988899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhHHHhhHHHHhhcHHHHHHHHHHhHHHH
Q psy12562 183 CQRICDQWDHLGALTQQRRHALDEAEKILEKIDILHLEFAKRAAPFNNWLDGTREDLVDMFIVHTMEEIQGLIDAHSQFK 262 (599)
Q Consensus 183 ~~~l~~rw~~L~~~~~~R~~~L~~~~~~~q~~~~~~~~f~~~~~~l~~Wl~~~~~~l~~~~~~~~~~~v~~ll~~h~~l~ 262 (599)
++.|+.+|..|...+..|...|+..+..++ |...+..+..||.+.+..+...+.+.+++.++.++..|+.|.
T Consensus 81 ~~~l~~~w~~l~~~~~~r~~~L~~~~~~~~--------~~~~~~~l~~wl~~~e~~l~~~~~~~~~~~~~~~l~~~~~~~ 152 (213)
T cd00176 81 LEELNQRWEELRELAEERRQRLEEALDLQQ--------FFRDADDLEQWLEEKEAALASEDLGKDLESVEELLKKHKELE 152 (213)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999888 566666699999999999988766668999999999999999
Q ss_pred hhHHHHHHHHhHHHHHHHHHHHHHHhhcCCCCCCCCCCCCChHHHHHHHHHHHHhhHhHhHHHHHH
Q psy12562 263 ATLGEADKEYNSIVNLVREVESTVQQYQIPGGLENPYTALTANDLTKKWTDVRKLVPQRDTTLQAE 328 (599)
Q Consensus 263 ~el~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~w~~L~~~~~~R~~~L~~~ 328 (599)
.++..+.+.+..+...+..+..... . .....+...+..|..+|..|...+..|...|+.+
T Consensus 153 ~~~~~~~~~~~~~~~~~~~l~~~~~---~---~~~~~~~~~l~~l~~~~~~l~~~~~~~~~~L~~~ 212 (213)
T cd00176 153 EELEAHEPRLKSLNELAEELLEEGH---P---DADEEIEEKLEELNERWEELLELAEERQKKLEEA 212 (213)
T ss_pred HHHHhchHHHHHHHHHHHHHHHcCC---C---CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9999999999988888888644322 1 1125677889999999999999999999999874
No 8
>KOG0027|consensus
Probab=99.83 E-value=4.6e-20 Score=162.76 Aligned_cols=141 Identities=24% Similarity=0.506 Sum_probs=122.5
Q ss_pred CCHHHHHHHHHHHHhhcCCCCCCcCHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhCCCCCCccchHHHHHHHhhhcCC
Q psy12562 450 ITQEQLNEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPNSTGYVHFDAFLDFMTRESTD 529 (599)
Q Consensus 450 ~~~~~~~~~~~~F~~~d~~~~g~l~~~e~~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~ 529 (599)
++.+....++.+|..||++++|+|+..+|..+++.+|..| +..++..++..+|.+++|.|+|++|+.++......
T Consensus 2 ~~~~~~~el~~~F~~fD~d~~G~i~~~el~~~lr~lg~~~-----t~~el~~~~~~~D~dg~g~I~~~eF~~l~~~~~~~ 76 (151)
T KOG0027|consen 2 LSEEQILELKEAFQLFDKDGDGKISVEELGAVLRSLGQNP-----TEEELRDLIKEIDLDGDGTIDFEEFLDLMEKLGEE 76 (151)
T ss_pred CCHHHHHHHHHHHHHHCCCCCCcccHHHHHHHHHHcCCCC-----CHHHHHHHHHHhCCCCCCeEcHHHHHHHHHhhhcc
Confidence 4567789999999999999999999999999999999999 99999999999999999999999999999875443
Q ss_pred CC----CHHHHHHHHHhhhCC-CCCcCHHHHhccCC---cchHHHHHHhcCCCCCCCCCCCCccHHHHHHHhhcC
Q psy12562 530 TD----TAEQVIDSFRILAGD-KPYILPDELRRELP---PDQAEYCIQRMPPYKGPNAIPGALDYQSFSTALYGE 596 (599)
Q Consensus 530 ~~----~~~~~~~~F~~~D~d-~G~it~~el~~~l~---~~~~~~~~~~~~~~~d~~~~dg~i~~~eF~~~~~~~ 596 (599)
.. ..+.++.||+.||.| +|+||..||+.+|+ .+.....+..|+...|.|+ ||.|+|++|+..|.+.
T Consensus 77 ~~~~~~~~~el~eaF~~fD~d~~G~Is~~el~~~l~~lg~~~~~~e~~~mi~~~d~d~-dg~i~f~ef~~~m~~~ 150 (151)
T KOG0027|consen 77 KTDEEASSEELKEAFRVFDKDGDGFISASELKKVLTSLGEKLTDEECKEMIREVDVDG-DGKVNFEEFVKMMSGK 150 (151)
T ss_pred cccccccHHHHHHHHHHHccCCCCcCcHHHHHHHHHHhCCcCCHHHHHHHHHhcCCCC-CCeEeHHHHHHHHhcC
Confidence 33 345999999999999 99999999999983 2233444556666678888 9999999999999864
No 9
>KOG0028|consensus
Probab=99.76 E-value=5.7e-18 Score=140.29 Aligned_cols=143 Identities=24% Similarity=0.407 Sum_probs=129.9
Q ss_pred cCCCHHHHHHHHHHHHhhcCCCCCCcCHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhCCCCCCccchHHHHHHHhhhc
Q psy12562 448 KGITQEQLNEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPNSTGYVHFDAFLDFMTRES 527 (599)
Q Consensus 448 ~~~~~~~~~~~~~~F~~~d~~~~g~l~~~e~~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~ 527 (599)
.+++.++.+.++..|..||++++|+|+..+|+.+++++|+.+ ...++..++..+|.+|+|.|+|++|+..+...+
T Consensus 25 ~~l~~~q~q~i~e~f~lfd~~~~g~iD~~EL~vAmralGFE~-----~k~ei~kll~d~dk~~~g~i~fe~f~~~mt~k~ 99 (172)
T KOG0028|consen 25 SELTEEQKQEIKEAFELFDPDMAGKIDVEELKVAMRALGFEP-----KKEEILKLLADVDKEGSGKITFEDFRRVMTVKL 99 (172)
T ss_pred ccccHHHHhhHHHHHHhhccCCCCcccHHHHHHHHHHcCCCc-----chHHHHHHHHhhhhccCceechHHHHHHHHHHH
Confidence 367788889999999999999999999999999999999999 899999999999999999999999999999887
Q ss_pred CCCCCHHHHHHHHHhhhCC-CCCcCHHHHhccC---CcchHHHHHHhcCCCCCCCCCCCCccHHHHHHHhhcC
Q psy12562 528 TDTDTAEQVIDSFRILAGD-KPYILPDELRREL---PPDQAEYCIQRMPPYKGPNAIPGALDYQSFSTALYGE 596 (599)
Q Consensus 528 ~~~~~~~~~~~~F~~~D~d-~G~it~~el~~~l---~~~~~~~~~~~~~~~~d~~~~dg~i~~~eF~~~~~~~ 596 (599)
....+.+++..+|+.+|.| +|.|+..+|..+. .+...+.-+.+|+..++.|+ ||.|+-++|+..|...
T Consensus 100 ~e~dt~eEi~~afrl~D~D~~Gkis~~~lkrvakeLgenltD~El~eMIeEAd~d~-dgevneeEF~~imk~t 171 (172)
T KOG0028|consen 100 GERDTKEEIKKAFRLFDDDKTGKISQRNLKRVAKELGENLTDEELMEMIEEADRDG-DGEVNEEEFIRIMKKT 171 (172)
T ss_pred hccCcHHHHHHHHHcccccCCCCcCHHHHHHHHHHhCccccHHHHHHHHHHhcccc-cccccHHHHHHHHhcC
Confidence 7777999999999999999 9999999999874 55555556667888889999 9999999999998764
No 10
>PTZ00183 centrin; Provisional
Probab=99.72 E-value=1.3e-16 Score=142.90 Aligned_cols=143 Identities=26% Similarity=0.506 Sum_probs=123.7
Q ss_pred ccCCCHHHHHHHHHHHHhhcCCCCCCcCHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhCCCCCCccchHHHHHHHhhh
Q psy12562 447 SKGITQEQLNEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPNSTGYVHFDAFLDFMTRE 526 (599)
Q Consensus 447 ~~~~~~~~~~~~~~~F~~~d~~~~g~l~~~e~~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~ 526 (599)
..++++.++..+..+|..+|.+++|.|+..+|..++..+|..+ +...+..++..+|.+++|.|+|.+|+.++...
T Consensus 8 ~~~~~~~~~~~~~~~F~~~D~~~~G~i~~~e~~~~l~~~g~~~-----~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~ 82 (158)
T PTZ00183 8 RPGLTEDQKKEIREAFDLFDTDGSGTIDPKELKVAMRSLGFEP-----KKEEIKQMIADVDKDGSGKIDFEEFLDIMTKK 82 (158)
T ss_pred cCCCCHHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHHhCCCC-----CHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHH
Confidence 4568899999999999999999999999999999999999888 88899999999999999999999999988764
Q ss_pred cCCCCCHHHHHHHHHhhhCC-CCCcCHHHHhccC-------CcchHHHHHHhcCCCCCCCCCCCCccHHHHHHHhhcCCC
Q psy12562 527 STDTDTAEQVIDSFRILAGD-KPYILPDELRREL-------PPDQAEYCIQRMPPYKGPNAIPGALDYQSFSTALYGESD 598 (599)
Q Consensus 527 ~~~~~~~~~~~~~F~~~D~d-~G~it~~el~~~l-------~~~~~~~~~~~~~~~~d~~~~dg~i~~~eF~~~~~~~~~ 598 (599)
.......+.+..+|+.+|.+ +|+|+..||..++ ++.++..++. ..+.++ +|.|+|++|+.+|.+.|.
T Consensus 83 ~~~~~~~~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~l~~~~~~~~~~----~~d~~~-~g~i~~~ef~~~~~~~~~ 157 (158)
T PTZ00183 83 LGERDPREEILKAFRLFDDDKTGKISLKNLKRVAKELGETITDEELQEMID----EADRNG-DGEISEEEFYRIMKKTNL 157 (158)
T ss_pred hcCCCcHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHH----HhCCCC-CCcCcHHHHHHHHhcccC
Confidence 44445668899999999999 9999999999876 3445554544 447777 999999999999998875
Q ss_pred C
Q psy12562 599 L 599 (599)
Q Consensus 599 ~ 599 (599)
+
T Consensus 158 ~ 158 (158)
T PTZ00183 158 F 158 (158)
T ss_pred C
Confidence 4
No 11
>cd00176 SPEC Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; the repeats are independent folding units; tandem repeats are found in differing numbers and arrange in an antiparallel manner to form dimers; the repeats are defined by a characteristic tryptophan (W) residue in helix A and a leucine (L) at the carboxyl end of helix C and separated by a linker of 5 residues; two copies of the repeat are present here
Probab=99.71 E-value=2.1e-16 Score=149.26 Aligned_cols=207 Identities=21% Similarity=0.394 Sum_probs=180.9
Q ss_pred HHHHhhhhhhhhhhhhHHHhhHHHHhhcHHHHHHHHHHhHHHHhhHHHHHHHHhHHHHHHHHHHHHHHhhcCCCCCCCCC
Q psy12562 220 EFAKRAAPFNNWLDGTREDLVDMFIVHTMEEIQGLIDAHSQFKATLGEADKEYNSIVNLVREVESTVQQYQIPGGLENPY 299 (599)
Q Consensus 220 ~f~~~~~~l~~Wl~~~~~~l~~~~~~~~~~~v~~ll~~h~~l~~el~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~ 299 (599)
.|...+..+..||.+++..|.+..++.|+..++.++++|+.|..++..+.+.+..+...++.+..... .....
T Consensus 4 ~f~~~~~~l~~Wl~~~e~~l~~~~~~~d~~~~~~~l~~~~~~~~e~~~~~~~~~~l~~~~~~L~~~~~-------~~~~~ 76 (213)
T cd00176 4 QFLRDADELEAWLSEKEELLSSTDYGDDLESVEALLKKHEALEAELAAHEERVEALNELGEQLIEEGH-------PDAEE 76 (213)
T ss_pred HHHHhHHHHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHhcCC-------CChHH
Confidence 49999999999999999999998777799999999999999999999999999999988888644222 25666
Q ss_pred CCCChHHHHHHHHHHHHhhHhHhHHHHHHHHhhcchHHHHHHHHHHhchhhhhHHHHHHHHhhhhccC-CCCHHHHHHHH
Q psy12562 300 TALTANDLTKKWTDVRKLVPQRDTTLQAELRKQQNNETLRRQFAEKANQVGPWIERQMDAVTSIGMGL-QGSLEDQLHRL 378 (599)
Q Consensus 300 ~~~~~~~l~~~w~~L~~~~~~R~~~L~~~l~~~~~~~~l~~~f~~~~~~~~~Wl~e~~~~l~~~~~~~-~~~~e~~~~~~ 378 (599)
+...++.|+.+|+.|+..+..|...|+.++. .++ |+..+..+..||...+..+....... ...++.++..|
T Consensus 77 i~~~~~~l~~~w~~l~~~~~~r~~~L~~~~~-------~~~-~~~~~~~l~~wl~~~e~~l~~~~~~~~~~~~~~~l~~~ 148 (213)
T cd00176 77 IQERLEELNQRWEELRELAEERRQRLEEALD-------LQQ-FFRDADDLEQWLEEKEAALASEDLGKDLESVEELLKKH 148 (213)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHH-HHHHHHHHHHHHHHHHHHhcCcccCCCHHHHHHHHHHH
Confidence 7788999999999999999999999999999 444 66667779999999999988644333 47889999999
Q ss_pred HHHHhhhhccccchHHHHHHHHHHhhcccccC-CCccccHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy12562 379 KEYEQGVYAYKPHIEELEKIHQAVQEGMIFEN-RYTQYTMETLRVGWEQLLTSINRNINEVENQ 441 (599)
Q Consensus 379 ~~~~~ei~~~~~~~~~l~~~~~~l~~~~~~~~-~~~~~~~~~l~~~w~~l~~~~~~r~~~Le~~ 441 (599)
++|..++..+.+.+..+...+..+......+. +.+...++.+..+|..+...+..+...|+..
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~l~~~~~~l~~~~~~~~~~L~~~ 212 (213)
T cd00176 149 KELEEELEAHEPRLKSLNELAEELLEEGHPDADEEIEEKLEELNERWEELLELAEERQKKLEEA 212 (213)
T ss_pred HHHHHHHHhchHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999998766554 5678999999999999999999999888763
No 12
>KOG4286|consensus
Probab=99.69 E-value=8.7e-14 Score=141.44 Aligned_cols=461 Identities=15% Similarity=0.201 Sum_probs=309.5
Q ss_pred HHHHHHHHHHHHhhhhhHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhHHhhHHHHHHHHHHHHHHhhccCCCchhHHHH
Q psy12562 103 AQKFKHKADIHEDWTRGKEEMLQSSDFRQCKLNELKALKKKHEAFESDLAAHQDRVEQIAAIAQELNTLEYHDSVSVNAR 182 (599)
Q Consensus 103 ~~~f~~~~~~~~~Wl~~~e~~l~~~~~~~~~l~~v~~~l~~h~~~~~el~~~~~~v~~l~~~~~~L~~~~~~~~~~i~~~ 182 (599)
.+.|..+..++..|+-.. ........ .|.-......+..+.+..++++ ..|...+..|+.+-......+.-.
T Consensus 3 ~q~~~~~l~~f~~w~l~d--~~~~~~~l-~dt~~~~~~~~~~~~~~~e~~a-----~~v~~~~~kl~~~l~~~~~~~~l~ 74 (966)
T KOG4286|consen 3 LQQFPLDLEKFLAWLLQD--ATRKERLL-EDSKGVKELMKQWQDLQGEIEA-----HNLDENSQKILRSLEGSDDAVLLQ 74 (966)
T ss_pred hhhhhhhHHHHHHHHHhh--hhhhHhhh-hcccccHHHHHHHhcccccccc-----ccCchHHHHHHHHhcCCccchHHH
Confidence 357889999999999221 11111111 2333456666777777777777 566777777777633222222222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhHHHhhHH-HHhhcHHHHHHHHHHhHHH
Q psy12562 183 CQRICDQWDHLGALTQQRRHALDEAEKILEKIDILHLEFAKRAAPFNNWLDGTREDLVDM-FIVHTMEEIQGLIDAHSQF 261 (599)
Q Consensus 183 ~~~l~~rw~~L~~~~~~R~~~L~~~~~~~q~~~~~~~~f~~~~~~l~~Wl~~~~~~l~~~-~~~~~~~~v~~ll~~h~~l 261 (599)
..+.+|..|++....-+.+|+.+-..+.+ ..-...++..|+.-+...++.. ++|+|++.|+.+-.-|++|
T Consensus 75 --~mn~~w~~l~kks~~ir~~lea~~~~w~k-------l~~~l~el~~wl~~kd~el~~q~p~ggd~~avq~q~~~~~a~ 145 (966)
T KOG4286|consen 75 --LMNFKWSELRKKSLNIRSHLEASSDQWKR-------LHLSLQELLVWLQLKDDELSRQAPIGGDFPAVQKQNDVHRAF 145 (966)
T ss_pred --HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HhhhHHHHHHHHHhhhHHHHhcCCCCCChHHHHHHHHHHHHH
Confidence 39999999999999999999999888876 7788899999999998888876 8999999999999999999
Q ss_pred HhhHHHHHHHHhHHHHHHHHHHHHHHhhcCCCC--CCCCCCC--------------CChHHHHHHHHHHHHhhHhHhHHH
Q psy12562 262 KATLGEADKEYNSIVNLVREVESTVQQYQIPGG--LENPYTA--------------LTANDLTKKWTDVRKLVPQRDTTL 325 (599)
Q Consensus 262 ~~el~~~~~~~~~~~~l~~~l~~~~~~~~~~~~--~~~~~~~--------------~~~~~l~~~w~~L~~~~~~R~~~L 325 (599)
+++++...+.+.... +.........-..+. .+.++-. .....+...|+.|...+....+.+
T Consensus 146 ~re~k~k~~~~~s~~---e~a~~fl~~~p~e~~e~~~~~~e~~p~~r~q~~~r~~~kqa~~~~~~we~l~~~~~~w~k~v 222 (966)
T KOG4286|consen 146 KRELKTKEPVIMSTL---ETARIFLTEQPLEGLEKYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKI 222 (966)
T ss_pred HHHHhhcccHHHHHH---HHHHHHHhcCCCcchhhcCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHH
Confidence 999999887554443 333334432221110 0111110 123678889999999999999999
Q ss_pred HHHHHhhcchHHHHHHHHHHhchhhhhHHHHHHHHhhhh-ccC--CCCHHHHHHHHHHHHhhhhccccchHHHHHHHHHH
Q psy12562 326 QAELRKQQNNETLRRQFAEKANQVGPWIERQMDAVTSIG-MGL--QGSLEDQLHRLKEYEQGVYAYKPHIEELEKIHQAV 402 (599)
Q Consensus 326 ~~~l~~~~~~~~l~~~f~~~~~~~~~Wl~e~~~~l~~~~-~~~--~~~~e~~~~~~~~~~~ei~~~~~~~~~l~~~~~~l 402 (599)
+.++++ +++.....+++..-|...+.....-. .|+ ..++..-+++.+.|..+|...+..|..++.++.+|
T Consensus 223 ~~~le~-------l~elq~a~~el~~~l~~ae~~~~~w~pvgdl~idsl~~h~e~~~~~~~ei~p~~~~v~~vndla~ql 295 (966)
T KOG4286|consen 223 DETLER-------LQELQEATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLARQL 295 (966)
T ss_pred HHHHHH-------HHHHHHHHHHHHHhhhHHHhhhhccccHHHHHHhHHHHHHHHHHHHHhhcchHhhchhhHHHHHHHh
Confidence 999994 56677777888777777776665322 122 37888889999999999999999999999999999
Q ss_pred hhcccccCCCccccHHHHHHHHHHHHHHHHHHHHHHHHHHHh----------hhcc-----CCCH---------------
Q psy12562 403 QEGMIFENRYTQYTMETLRVGWEQLLTSINRNINEVENQILT----------RDSK-----GITQ--------------- 452 (599)
Q Consensus 403 ~~~~~~~~~~~~~~~~~l~~~w~~l~~~~~~r~~~Le~~~~~----------~~~~-----~~~~--------------- 452 (599)
....+..+++....++.++.||.-|...+..+...|.++... ...+ .|++
T Consensus 296 ~~~d~~ls~~~~~~le~~n~rwk~Lq~SV~~rl~qlrna~~dfgp~sqhflsqsvq~pw~rais~nkvpyyinh~~q~t~ 375 (966)
T KOG4286|consen 296 TTLDIQLSPYNLSTLEDLNTRWKLLQVSVPDRLTQLRNAHRDFGPISQHFLSQSVQGPWERAISPNKVPYYINHETQTTC 375 (966)
T ss_pred hhcccCCChhhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHhhccCcccchhccCccccchhhcccchhhh
Confidence 987777778888999999999999999999999999873211 0000 0000
Q ss_pred ---------------------------HHHHH--------------HHHHHHhhcCC-CCCCcCHHHHHHHHHHc-----
Q psy12562 453 ---------------------------EQLNE--------------FRASFNHFDKN-RTGRLAPEEFKSCLVSL----- 485 (599)
Q Consensus 453 ---------------------------~~~~~--------------~~~~F~~~d~~-~~g~l~~~e~~~~l~~~----- 485 (599)
..+.. ..++|+.++-. +...+...+...|+..+
T Consensus 376 wdhp~~tel~q~lad~nnvKfsaYRtAmKlr~LQK~l~ldlv~ltl~l~if~~h~l~~~~e~m~~~~~i~~L~~~y~~l~ 455 (966)
T KOG4286|consen 376 WDHPKMTELYQSLADLNNVKFSAYRTAMKLRRLQKALCLDLLSLSLALDALDQHNLKQNDQPMDILQIINCLTTIYDRLE 455 (966)
T ss_pred ccchHHHHHHHHHHHhcCeeehhHHHHHHHHHHHHHHHhccccHHHHHHHHHHhcccccCcCCCHHHHHHHHHHHHHHHH
Confidence 00011 12344444322 22334444555554322
Q ss_pred ---CCCCCCCCCCHHHHHHHHHHhCCCCCCccchHHHHHHHhhhcCCCCCHHHHHHHHHhhhCCCCCcCHHHHhccC---
Q psy12562 486 ---GYSIGKDRQGEIDFQRILAVVDPNSTGYVHFDAFLDFMTRESTDTDTAEQVIDSFRILAGDKPYILPDELRREL--- 559 (599)
Q Consensus 486 ---g~~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~~F~~~D~d~G~it~~el~~~l--- 559 (599)
|.-....=+-..-++-+++.||+..+|.|..-+|...++.+ ......+.++.+|.....+..-+....|..+|
T Consensus 456 e~~g~~v~v~l~vD~~lN~llNvyD~~R~g~irvls~ki~~i~l-ck~~leek~~ylF~~vA~~~sq~~q~~l~lLL~dl 534 (966)
T KOG4286|consen 456 QEHGNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKIGIISL-CKAHLEDKYRYLFKQVASSTSQCDQRRLGLLLHDL 534 (966)
T ss_pred HHcccccccchHHHHHHHHHHHhcccCCCcceEEeeehhhHHHH-hcchhHHHHHHHHHHHcCchhhHHHHHHHHHHHHH
Confidence 11110000112233567889999999999999998877763 34456789999999998663233355554443
Q ss_pred ---------------C--cchHHHHHHhcCCCCCCCCCCCCccHHHHHHHhhcCCC
Q psy12562 560 ---------------P--PDQAEYCIQRMPPYKGPNAIPGALDYQSFSTALYGESD 598 (599)
Q Consensus 560 ---------------~--~~~~~~~~~~~~~~~d~~~~dg~i~~~eF~~~~~~~~~ 598 (599)
+ +--+.-||.- .+| --.|++..|++-+-..|.
T Consensus 535 iqipr~lGE~aAfGgsNvepsvrsCF~~------v~~-~pei~~~~f~dw~~~epq 583 (966)
T KOG4286|consen 535 IQIPRQLGEVAAFGGSNIEPSVRSCFQF------VNN-KPEIEAALFLDWMRLEPQ 583 (966)
T ss_pred HHHHHHHhHHHhhcCCCCChHHHHHHHh------cCC-CCcchHHHHHHHhccCcc
Confidence 1 1223444431 112 346999999987766553
No 13
>PTZ00184 calmodulin; Provisional
Probab=99.68 E-value=4.5e-16 Score=138.03 Aligned_cols=141 Identities=27% Similarity=0.541 Sum_probs=118.6
Q ss_pred CCCHHHHHHHHHHHHhhcCCCCCCcCHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhCCCCCCccchHHHHHHHhhhcC
Q psy12562 449 GITQEQLNEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPNSTGYVHFDAFLDFMTREST 528 (599)
Q Consensus 449 ~~~~~~~~~~~~~F~~~d~~~~g~l~~~e~~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~ 528 (599)
.++++....+...|..+|.+++|.|+.++|..++..+|.++ +...+..+++.+|.+++|.|+|++|+.++.....
T Consensus 4 ~~~~~~~~~~~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~~-----~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~~~~~ 78 (149)
T PTZ00184 4 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNP-----TEAELQDMINEVDADGNGTIDFPEFLTLMARKMK 78 (149)
T ss_pred ccCHHHHHHHHHHHHHHcCCCCCcCCHHHHHHHHHHhCCCC-----CHHHHHHHHHhcCcCCCCcCcHHHHHHHHHHhcc
Confidence 46788889999999999999999999999999999999888 8889999999999999999999999999876544
Q ss_pred CCCCHHHHHHHHHhhhCC-CCCcCHHHHhccCC---cchHHHHHHhcCCCCCCCCCCCCccHHHHHHHhhc
Q psy12562 529 DTDTAEQVIDSFRILAGD-KPYILPDELRRELP---PDQAEYCIQRMPPYKGPNAIPGALDYQSFSTALYG 595 (599)
Q Consensus 529 ~~~~~~~~~~~F~~~D~d-~G~it~~el~~~l~---~~~~~~~~~~~~~~~d~~~~dg~i~~~eF~~~~~~ 595 (599)
.....+.+..+|..+|.+ +|+|+..+|..++. +......+..++...|.++ +|.|+|++|+..|..
T Consensus 79 ~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~-~g~i~~~ef~~~~~~ 148 (149)
T PTZ00184 79 DTDSEEEIKEAFKVFDRDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDG-DGQINYEEFVKMMMS 148 (149)
T ss_pred CCcHHHHHHHHHHhhCCCCCCeEeHHHHHHHHHHHCCCCCHHHHHHHHHhcCCCC-CCcCcHHHHHHHHhc
Confidence 445567899999999999 99999999998762 2222333444455557788 999999999998764
No 14
>KOG0030|consensus
Probab=99.68 E-value=4.9e-16 Score=125.54 Aligned_cols=136 Identities=21% Similarity=0.441 Sum_probs=118.3
Q ss_pred CCCHHHHHHHHHHHHhhcCCCCCCcCHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhCCC--CCCccchHHHHHHHhhh
Q psy12562 449 GITQEQLNEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPN--STGYVHFDAFLDFMTRE 526 (599)
Q Consensus 449 ~~~~~~~~~~~~~F~~~d~~~~g~l~~~e~~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~--~~g~I~~~eF~~~~~~~ 526 (599)
.+++++..+++++|..||..+||+|+..+...|+|++|.+| ++.++......++++ +--+|+|++|+.++...
T Consensus 4 ~~~~d~~~e~ke~F~lfD~~gD~ki~~~q~gdvlRalG~nP-----T~aeV~k~l~~~~~~~~~~~rl~FE~fLpm~q~v 78 (152)
T KOG0030|consen 4 AFTPDQMEEFKEAFLLFDRTGDGKISGSQVGDVLRALGQNP-----TNAEVLKVLGQPKRREMNVKRLDFEEFLPMYQQV 78 (152)
T ss_pred ccCcchHHHHHHHHHHHhccCcccccHHHHHHHHHHhcCCC-----cHHHHHHHHcCcccchhhhhhhhHHHHHHHHHHH
Confidence 46778889999999999999999999999999999999999 999999999988866 44689999999998754
Q ss_pred c--CCCCCHHHHHHHHHhhhCC-CCCcCHHHHhccC-------CcchHHHHHHhcCCCCCCCCCCCCccHHHHHHHhhc
Q psy12562 527 S--TDTDTAEQVIDSFRILAGD-KPYILPDELRREL-------PPDQAEYCIQRMPPYKGPNAIPGALDYQSFSTALYG 595 (599)
Q Consensus 527 ~--~~~~~~~~~~~~F~~~D~d-~G~it~~el~~~l-------~~~~~~~~~~~~~~~~d~~~~dg~i~~~eF~~~~~~ 595 (599)
. ....+.+++...++.||++ +|+|...||+++| +.++++.++... .|+ +|.|+|+.|+..++.
T Consensus 79 aknk~q~t~edfvegLrvFDkeg~G~i~~aeLRhvLttlGekl~eeEVe~Llag~-----eD~-nG~i~YE~fVk~i~~ 151 (152)
T KOG0030|consen 79 AKNKDQGTYEDFVEGLRVFDKEGNGTIMGAELRHVLTTLGEKLTEEEVEELLAGQ-----EDS-NGCINYEAFVKHIMS 151 (152)
T ss_pred HhccccCcHHHHHHHHHhhcccCCcceeHHHHHHHHHHHHhhccHHHHHHHHccc-----ccc-CCcCcHHHHHHHHhc
Confidence 3 3456789999999999999 9999999999997 567888777654 234 899999999998764
No 15
>KOG0031|consensus
Probab=99.67 E-value=1.2e-15 Score=125.46 Aligned_cols=133 Identities=24% Similarity=0.459 Sum_probs=119.7
Q ss_pred cCCCHHHHHHHHHHHHhhcCCCCCCcCHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhCCCCCCccchHHHHHHHhhhc
Q psy12562 448 KGITQEQLNEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPNSTGYVHFDAFLDFMTRES 527 (599)
Q Consensus 448 ~~~~~~~~~~~~~~F~~~d~~~~g~l~~~e~~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~ 527 (599)
..++..+++++++.|..+|+|+||.|+.++++..+.++|..+ ++.+++.|+.. +.|.|+|--|+.++...+
T Consensus 24 amf~q~QIqEfKEAF~~mDqnrDG~IdkeDL~d~~aSlGk~~-----~d~elDaM~~E----a~gPINft~FLTmfGekL 94 (171)
T KOG0031|consen 24 AMFDQSQIQEFKEAFNLMDQNRDGFIDKEDLRDMLASLGKIA-----SDEELDAMMKE----APGPINFTVFLTMFGEKL 94 (171)
T ss_pred HHhhHHHHHHHHHHHHHHhccCCCcccHHHHHHHHHHcCCCC-----CHHHHHHHHHh----CCCCeeHHHHHHHHHHHh
Confidence 356788999999999999999999999999999999999999 99999999985 568999999999999888
Q ss_pred CCCCCHHHHHHHHHhhhCC-CCCcCHHHHhccC-------CcchHHHHHHhcCCCCCCCCCCCCccHHHHHHHhh
Q psy12562 528 TDTDTAEQVIDSFRILAGD-KPYILPDELRREL-------PPDQAEYCIQRMPPYKGPNAIPGALDYQSFSTALY 594 (599)
Q Consensus 528 ~~~~~~~~~~~~F~~~D~d-~G~it~~el~~~l-------~~~~~~~~~~~~~~~~d~~~~dg~i~~~eF~~~~~ 594 (599)
.+..+.+.+..||+.||.+ +|+|..+.|+.+| ++++++.+...+ -.|. .|.|+|..|+..|.
T Consensus 95 ~gtdpe~~I~~AF~~FD~~~~G~I~~d~lre~Ltt~gDr~~~eEV~~m~r~~----p~d~-~G~~dy~~~~~~it 164 (171)
T KOG0031|consen 95 NGTDPEEVILNAFKTFDDEGSGKIDEDYLRELLTTMGDRFTDEEVDEMYREA----PIDK-KGNFDYKAFTYIIT 164 (171)
T ss_pred cCCCHHHHHHHHHHhcCccCCCccCHHHHHHHHHHhcccCCHHHHHHHHHhC----Cccc-CCceeHHHHHHHHH
Confidence 8889999999999999999 9999999999987 467787776665 3444 79999999999987
No 16
>KOG0034|consensus
Probab=99.65 E-value=9.3e-16 Score=136.56 Aligned_cols=142 Identities=23% Similarity=0.390 Sum_probs=123.0
Q ss_pred cCCCHHHHHHHHHHHHhhcCC-CCCCcCHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhCCCCCCc-cchHHHHHHHhh
Q psy12562 448 KGITQEQLNEFRASFNHFDKN-RTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPNSTGY-VHFDAFLDFMTR 525 (599)
Q Consensus 448 ~~~~~~~~~~~~~~F~~~d~~-~~g~l~~~e~~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~-I~~~eF~~~~~~ 525 (599)
+.++..++..+...|..++.+ ++|.++.++|..+. .+..+| ...+++..++.+++|. |+|++|+..+..
T Consensus 25 ~~fs~~EI~~L~~rF~kl~~~~~~g~lt~eef~~i~-~~~~Np--------~~~rI~~~f~~~~~~~~v~F~~Fv~~ls~ 95 (187)
T KOG0034|consen 25 TQFSANEIERLYERFKKLDRNNGDGYLTKEEFLSIP-ELALNP--------LADRIIDRFDTDGNGDPVDFEEFVRLLSV 95 (187)
T ss_pred cccCHHHHHHHHHHHHHhccccccCccCHHHHHHHH-HHhcCc--------HHHHHHHHHhccCCCCccCHHHHHHHHhh
Confidence 348899999999999999999 99999999999998 333444 6778999999998888 999999999988
Q ss_pred hcCCCCCHHHHHHHHHhhhCC-CCCcCHHHHhccC--------C--cchHHHHHHhcCCCCCCCCCCCCccHHHHHHHhh
Q psy12562 526 ESTDTDTAEQVIDSFRILAGD-KPYILPDELRREL--------P--PDQAEYCIQRMPPYKGPNAIPGALDYQSFSTALY 594 (599)
Q Consensus 526 ~~~~~~~~~~~~~~F~~~D~d-~G~it~~el~~~l--------~--~~~~~~~~~~~~~~~d~~~~dg~i~~~eF~~~~~ 594 (599)
+.......+.+.-||+.||.+ +|+|+++|+..++ + .+....++...+..+|.|+ ||.|+|+||.+.+.
T Consensus 96 f~~~~~~~~Kl~faF~vYD~~~~G~I~reel~~iv~~~~~~~~~~~~e~~~~i~d~t~~e~D~d~-DG~IsfeEf~~~v~ 174 (187)
T KOG0034|consen 96 FSPKASKREKLRFAFRVYDLDGDGFISREELKQILRMMVGENDDMSDEQLEDIVDKTFEEADTDG-DGKISFEEFCKVVE 174 (187)
T ss_pred hcCCccHHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHHHccCCcchHHHHHHHHHHHHHHhCCCC-CCcCcHHHHHHHHH
Confidence 766656667999999999999 9999999999976 2 4667777778888889999 99999999999999
Q ss_pred cCCCC
Q psy12562 595 GESDL 599 (599)
Q Consensus 595 ~~~~~ 599 (599)
+.|.+
T Consensus 175 ~~P~~ 179 (187)
T KOG0034|consen 175 KQPDL 179 (187)
T ss_pred cCccH
Confidence 88753
No 17
>KOG4286|consensus
Probab=99.64 E-value=1.1e-11 Score=126.48 Aligned_cols=445 Identities=14% Similarity=0.168 Sum_probs=278.5
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHhcccCCCCCCCHHHHHHHHHHHHHHHH
Q psy12562 70 DIANAWKGLETSEKSFEEWLLSEMMRLERLEHLAQKFKHKADIHEDWTRGKEEMLQSSDFRQCKLNELKALKKKHEAFES 149 (599)
Q Consensus 70 ~l~~~w~~L~~~~~~r~~~L~~~~~rl~~l~~l~~~f~~~~~~~~~Wl~~~e~~l~~~~~~~~~l~~v~~~l~~h~~~~~ 149 (599)
..+.+|+.|...+.+-+ .||+....-|.+......++..|+..+.+.+..+.|.++|+.+|+.+-.-|++|+.
T Consensus 75 ~mn~~w~~l~kks~~ir-------~~lea~~~~w~kl~~~l~el~~wl~~kd~el~~q~p~ggd~~avq~q~~~~~a~~r 147 (966)
T KOG4286|consen 75 LMNFKWSELRKKSLNIR-------SHLEASSDQWKRLHLSLQELLVWLQLKDDELSRQAPIGGDFPAVQKQNDVHRAFKR 147 (966)
T ss_pred HHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHhhhHHHHHHHHHhhhHHHHhcCCCCCChHHHHHHHHHHHHHHH
Confidence 48899999988765544 45555566778899999999999999999999888888999999999999999999
Q ss_pred hHHhhHHHHHHHHHHHHHHhhccCC-------Cc-------------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy12562 150 DLAAHQDRVEQIAAIAQELNTLEYH-------DS-------------VSVNARCQRICDQWDHLGALTQQRRHALDEAEK 209 (599)
Q Consensus 150 el~~~~~~v~~l~~~~~~L~~~~~~-------~~-------------~~i~~~~~~l~~rw~~L~~~~~~R~~~L~~~~~ 209 (599)
||.+....+-+....++.++..... +. .-+......+...|+.|...+..-.+.++.+++
T Consensus 148 e~k~k~~~~~s~~e~a~~fl~~~p~e~~e~~~~~~e~~p~~r~q~~~r~~~kqa~~~~~~we~l~~~~~~w~k~v~~~le 227 (966)
T KOG4286|consen 148 ELKTKEPVIMSTLETARIFLTEQPLEGLEKYQEPRELPPEERAQNVTRLLRKQAEEVNTEWEKLNLHSADWQRKIDETLE 227 (966)
T ss_pred HHhhcccHHHHHHHHHHHHHhcCCCcchhhcCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHH
Confidence 9999999999999999887665321 00 124456678899999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhhhhhhhhhhHHHhhHH-HHhh-cHHHHHHHHHHhHHHHhhHHHHHHHHhHHHHHHHHHHHHHH
Q psy12562 210 ILEKIDILHLEFAKRAAPFNNWLDGTREDLVDM-FIVH-TMEEIQGLIDAHSQFKATLGEADKEYNSIVNLVREVESTVQ 287 (599)
Q Consensus 210 ~~q~~~~~~~~f~~~~~~l~~Wl~~~~~~l~~~-~~~~-~~~~v~~ll~~h~~l~~el~~~~~~~~~~~~l~~~l~~~~~ 287 (599)
+++. .....+++..=|...+...... ++|+ -+++++.-+.+.+.|..++......|..|..+..+|.. .
T Consensus 228 ~l~e-------lq~a~~el~~~l~~ae~~~~~w~pvgdl~idsl~~h~e~~~~~~~ei~p~~~~v~~vndla~ql~~--~ 298 (966)
T KOG4286|consen 228 RLQE-------LQEATDELDLKLRQAEVIKGSWQPVGDLLIDSLQDHLEKVKALRGEIAPLKENVSHVNDLARQLTT--L 298 (966)
T ss_pred HHHH-------HHHHHHHHHHhhhHHHhhhhccccHHHHHHhHHHHHHHHHHHHHhhcchHhhchhhHHHHHHHhhh--c
Confidence 9986 4455556666666665555554 3443 35788888999999999999999988888888887633 2
Q ss_pred hhcCCCCCCCCCCCCChHHHHHHHHHHHHhhHhHhHHHHHHHHhhcchHHHHHHHHHHhchhhhh---------------
Q psy12562 288 QYQIPGGLENPYTALTANDLTKKWTDVRKLVPQRDTTLQAELRKQQNNETLRRQFAEKANQVGPW--------------- 352 (599)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~l~~~w~~L~~~~~~R~~~L~~~l~~~~~~~~l~~~f~~~~~~~~~W--------------- 352 (599)
..+ -..+....++.|+.||..|...+..|...|.++-+...-..+. |...--. ..|
T Consensus 299 d~~-----ls~~~~~~le~~n~rwk~Lq~SV~~rl~qlrna~~dfgp~sqh---flsqsvq-~pw~rais~nkvpyyinh 369 (966)
T KOG4286|consen 299 DIQ-----LSPYNLSTLEDLNTRWKLLQVSVPDRLTQLRNAHRDFGPISQH---FLSQSVQ-GPWERAISPNKVPYYINH 369 (966)
T ss_pred ccC-----CChhhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHH---HhhccCc-ccchhccCccccchhhcc
Confidence 222 2445556799999999999999999999999987743322221 3222211 124
Q ss_pred -------HHHHHHHHhh--hhccC-CCCHHHHHHHHHHHHhhhhccccchHHHHHHHHHHhhcccccCCCccccHHHHHH
Q psy12562 353 -------IERQMDAVTS--IGMGL-QGSLEDQLHRLKEYEQGVYAYKPHIEELEKIHQAVQEGMIFENRYTQYTMETLRV 422 (599)
Q Consensus 353 -------l~e~~~~l~~--~~~~~-~~~~e~~~~~~~~~~~ei~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~l~~ 422 (599)
=..+...+-. .+++. .-++=.---++.++++-+-.-.-.+.-+.++..+..-.+-.....+...+..|..
T Consensus 370 ~~q~t~wdhp~~tel~q~lad~nnvKfsaYRtAmKlr~LQK~l~ldlv~ltl~l~if~~h~l~~~~e~m~~~~~i~~L~~ 449 (966)
T KOG4286|consen 370 ETQTTCWDHPKMTELYQSLADLNNVKFSAYRTAMKLRRLQKALCLDLLSLSLALDALDQHNLKQNDQPMDILQIINCLTT 449 (966)
T ss_pred cchhhhccchHHHHHHHHHHHhcCeeehhHHHHHHHHHHHHHHHhccccHHHHHHHHHHhcccccCcCCCHHHHHHHHHH
Confidence 1111111110 11111 1111111112223332221111111222222222111111111111122222222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhccCCCHHHHHHHHHHHHhhcCCCCCCcCHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Q psy12562 423 GWEQLLTSINRNINEVENQILTRDSKGITQEQLNEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRI 502 (599)
Q Consensus 423 ~w~~l~~~~~~r~~~Le~~~~~~~~~~~~~~~~~~~~~~F~~~d~~~~g~l~~~e~~~~l~~~g~~~~~~~~~~~~~~~~ 502 (599)
.+..+.+. +. . ..+++-.-.-.+.=+.+.||+..+|.|..-+|+..|-.+.-.+ .++-..-+
T Consensus 450 ~y~~l~e~---~g----~------~v~v~l~vD~~lN~llNvyD~~R~g~irvls~ki~~i~lck~~-----leek~~yl 511 (966)
T KOG4286|consen 450 IYDRLEQE---HG----N------LVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKIGIISLCKAH-----LEDKYRYL 511 (966)
T ss_pred HHHHHHHH---cc----c------ccccchHHHHHHHHHHHhcccCCCcceEEeeehhhHHHHhcch-----hHHHHHHH
Confidence 22222211 11 1 0111111112345566889999999999999999888776555 67777789
Q ss_pred HHHhCCCCCCccchHHHHHHHhhh------------cCCCCCHHHHHHHHHhhhCCCCCcCHHHHhccC
Q psy12562 503 LAVVDPNSTGYVHFDAFLDFMTRE------------STDTDTAEQVIDSFRILAGDKPYILPDELRREL 559 (599)
Q Consensus 503 ~~~~d~~~~g~I~~~eF~~~~~~~------------~~~~~~~~~~~~~F~~~D~d~G~it~~el~~~l 559 (599)
|..+..+++..+ -..|-.++... +++..-.-.++.+|+ +-.+...|+...|-..+
T Consensus 512 F~~vA~~~sq~~-q~~l~lLL~dliqipr~lGE~aAfGgsNvepsvrsCF~-~v~~~pei~~~~f~dw~ 578 (966)
T KOG4286|consen 512 FKQVASSTSQCD-QRRLGLLLHDLIQIPRQLGEVAAFGGSNIEPSVRSCFQ-FVNNKPEIEAALFLDWM 578 (966)
T ss_pred HHHHcCchhhHH-HHHHHHHHHHHHHHHHHHhHHHhhcCCCCChHHHHHHH-hcCCCCcchHHHHHHHh
Confidence 998875655433 33343333211 223334467899998 33335678888887754
No 18
>KOG0044|consensus
Probab=99.49 E-value=1.4e-13 Score=122.48 Aligned_cols=143 Identities=17% Similarity=0.288 Sum_probs=115.3
Q ss_pred ccCCCHHHHHHHHHHHHhhcCCCCCCcCHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhCCCCCCccchHHHHHHHhhh
Q psy12562 447 SKGITQEQLNEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPNSTGYVHFDAFLDFMTRE 526 (599)
Q Consensus 447 ~~~~~~~~~~~~~~~F~~~d~~~~g~l~~~e~~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~ 526 (599)
.+.++..++..|...|.. ..++|.++.++|+.++...+-.. .+...++.+|+.+|.|++|.|+|.||+..+...
T Consensus 20 ~t~f~~~ei~~~Yr~Fk~--~cP~G~~~~~~F~~i~~~~fp~g----d~~~y~~~vF~~fD~~~dg~i~F~Efi~als~~ 93 (193)
T KOG0044|consen 20 QTKFSKKEIQQWYRGFKN--ECPSGRLTLEEFREIYASFFPDG----DASKYAELVFRTFDKNKDGTIDFLEFICALSLT 93 (193)
T ss_pred hcCCCHHHHHHHHHHhcc--cCCCCccCHHHHHHHHHHHCCCC----CHHHHHHHHHHHhcccCCCCcCHHHHHHHHHHH
Confidence 467888777777777766 45789999999999999876422 156778889999999999999999999998764
Q ss_pred cCCCCCHHHHHHHHHhhhCC-CCCcCHHHHhccC--------C------cchHHHHHHhcCCCCCCCCCCCCccHHHHHH
Q psy12562 527 STDTDTAEQVIDSFRILAGD-KPYILPDELRREL--------P------PDQAEYCIQRMPPYKGPNAIPGALDYQSFST 591 (599)
Q Consensus 527 ~~~~~~~~~~~~~F~~~D~d-~G~it~~el~~~l--------~------~~~~~~~~~~~~~~~d~~~~dg~i~~~eF~~ 591 (599)
..+...+.+..+|+.||.| +|+||..|+..++ . +...+.++..++...|.|. ||.|++++|+.
T Consensus 94 -~rGt~eekl~w~F~lyD~dgdG~It~~Eml~iv~~i~~m~~~~~~~~~~~~~~~~v~~if~k~D~n~-Dg~lT~eef~~ 171 (193)
T KOG0044|consen 94 -SRGTLEEKLKWAFRLYDLDGDGYITKEEMLKIVQAIYQMTGSKALPEDEETPEERVDKIFSKMDKNK-DGKLTLEEFIE 171 (193)
T ss_pred -cCCcHHHHhhhhheeecCCCCceEcHHHHHHHHHHHHHHcccccCCcccccHHHHHHHHHHHcCCCC-CCcccHHHHHH
Confidence 3446678999999999999 9999999998875 1 2335555666666669998 99999999999
Q ss_pred HhhcCC
Q psy12562 592 ALYGES 597 (599)
Q Consensus 592 ~~~~~~ 597 (599)
.+...+
T Consensus 172 ~~~~d~ 177 (193)
T KOG0044|consen 172 GCKADP 177 (193)
T ss_pred HhhhCH
Confidence 887654
No 19
>KOG0037|consensus
Probab=99.46 E-value=8.1e-13 Score=116.55 Aligned_cols=125 Identities=20% Similarity=0.339 Sum_probs=108.5
Q ss_pred HHHHHHHHHhhcCCCCCCcCHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhCCCCCCccchHHHHHHHhhhcCCCCCHH
Q psy12562 455 LNEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPNSTGYVHFDAFLDFMTRESTDTDTAE 534 (599)
Q Consensus 455 ~~~~~~~F~~~d~~~~g~l~~~e~~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~ 534 (599)
-..+...|...|+|++|.|+.+|+..++...+..+ ++.+.|+.|+..||.+.+|+|+|.||..+|.-+ .
T Consensus 56 ~~~~~~~f~~vD~d~sg~i~~~eLq~aLsn~~~~~----Fs~~TcrlmI~mfd~~~~G~i~f~EF~~Lw~~i-------~ 124 (221)
T KOG0037|consen 56 FPQLAGWFQSVDRDRSGRILAKELQQALSNGTWSP----FSIETCRLMISMFDRDNSGTIGFKEFKALWKYI-------N 124 (221)
T ss_pred cHHHHHHHHhhCccccccccHHHHHHHhhcCCCCC----CCHHHHHHHHHHhcCCCCCccCHHHHHHHHHHH-------H
Confidence 35788999999999999999999999998655432 288999999999999999999999999999764 7
Q ss_pred HHHHHHHhhhCC-CCCcCHHHHhccC-------CcchHHHHHHhcCCCCCCCCCCCCccHHHHHHHhhc
Q psy12562 535 QVIDSFRILAGD-KPYILPDELRREL-------PPDQAEYCIQRMPPYKGPNAIPGALDYQSFSTALYG 595 (599)
Q Consensus 535 ~~~~~F~~~D~d-~G~it~~el~~~l-------~~~~~~~~~~~~~~~~d~~~~dg~i~~~eF~~~~~~ 595 (599)
.++.+|+.||+| +|+|+..||+.+| +|...+.++++. +.-+ +|.|.|++|+.++..
T Consensus 125 ~Wr~vF~~~D~D~SG~I~~sEL~~Al~~~Gy~Lspq~~~~lv~ky----d~~~-~g~i~FD~FI~ccv~ 188 (221)
T KOG0037|consen 125 QWRNVFRTYDRDRSGTIDSSELRQALTQLGYRLSPQFYNLLVRKY----DRFG-GGRIDFDDFIQCCVV 188 (221)
T ss_pred HHHHHHHhcccCCCCcccHHHHHHHHHHcCcCCCHHHHHHHHHHh----cccc-CCceeHHHHHHHHHH
Confidence 999999999999 9999999999986 577777777665 4444 789999999999865
No 20
>smart00150 SPEC Spectrin repeats.
Probab=99.44 E-value=1.3e-12 Score=107.20 Aligned_cols=100 Identities=34% Similarity=0.601 Sum_probs=95.4
Q ss_pred HHHHHHHHHHhhhhhHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhHHhhHHHHHHHHHHHHHHhhccCCCchhHHHHHH
Q psy12562 105 KFKHKADIHEDWTRGKEEMLQSSDFRQCKLNELKALKKKHEAFESDLAAHQDRVEQIAAIAQELNTLEYHDSVSVNARCQ 184 (599)
Q Consensus 105 ~f~~~~~~~~~Wl~~~e~~l~~~~~~~~~l~~v~~~l~~h~~~~~el~~~~~~v~~l~~~~~~L~~~~~~~~~~i~~~~~ 184 (599)
+|...+..+.+||.+++..+...++| .|+..++.++++|+.|+.+|..+++.|..|...|+.|+..++++++.|..++.
T Consensus 2 ~f~~~~~~l~~Wl~~~e~~l~~~~~~-~d~~~~~~~~~~~~~~~~e~~~~~~~v~~~~~~~~~L~~~~~~~~~~i~~~~~ 80 (101)
T smart00150 2 QFLRDADELEAWLSEKEALLASEDLG-KDLESVEALLKKHEALEAELEAHEERVEALNELGEQLIEEGHPDAEEIEERLE 80 (101)
T ss_pred chHHHHHHHHHHHHHHHHHHhCCCCC-CCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcHHHHHHHHH
Confidence 69999999999999999999887775 89999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHH
Q psy12562 185 RICDQWDHLGALTQQRRHALD 205 (599)
Q Consensus 185 ~l~~rw~~L~~~~~~R~~~L~ 205 (599)
.|+.+|..|+..+..|+..|+
T Consensus 81 ~l~~~w~~l~~~~~~r~~~L~ 101 (101)
T smart00150 81 ELNERWEELKELAEERRQKLE 101 (101)
T ss_pred HHHHHHHHHHHHHHHHHHhcC
Confidence 999999999999999998873
No 21
>PF00435 Spectrin: Spectrin repeat; InterPro: IPR002017 Spectrin repeats [] are found in several proteins involved in cytoskeletal structure. These include spectrin alpha and beta subunits [, ], alpha-actinin [] and dystrophin. The spectrin repeat forms a three-helix bundle. The second helix is interrupted by proline in some sequences. The repeats are defined by a characteristic tryptophan (W) residue at position 17 in helix A and a leucine (L) at 2 residues from the carboxyl end of helix C.; GO: 0005515 protein binding; PDB: 1HCI_A 1QUU_A 3FB2_B 1S35_A 1U5P_A 1U4Q_A 1CUN_B 1YDI_B 3EDV_A 1AJ3_A ....
Probab=99.39 E-value=9.8e-12 Score=102.69 Aligned_cols=104 Identities=30% Similarity=0.494 Sum_probs=98.6
Q ss_pred HHHHHHHHHHHHHhhhhhHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhHHhhHHHHHHHHHHHHHHhhccCCCchhHHH
Q psy12562 102 LAQKFKHKADIHEDWTRGKEEMLQSSDFRQCKLNELKALKKKHEAFESDLAAHQDRVEQIAAIAQELNTLEYHDSVSVNA 181 (599)
Q Consensus 102 l~~~f~~~~~~~~~Wl~~~e~~l~~~~~~~~~l~~v~~~l~~h~~~~~el~~~~~~v~~l~~~~~~L~~~~~~~~~~i~~ 181 (599)
.+++|...++++..||..++..+...++ +.++.++..++++|+.|+.+|..+++.+..|...|..|...++++++.|..
T Consensus 2 ~~~~f~~~~~~l~~Wl~~~e~~l~~~~~-~~~~~~~~~~~~~~~~~~~ei~~~~~~l~~l~~~~~~L~~~~~~~~~~i~~ 80 (105)
T PF00435_consen 2 QLQQFQQEADELLDWLQETEAKLSSSEP-GSDLEELEEQLKKHKELQEEIESRQERLESLNEQAQQLIDSGPEDSDEIQE 80 (105)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCSCTH-SSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTHTTHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCC-CCCHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHH
Confidence 4569999999999999999999988777 589999999999999999999999999999999999998889999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Q psy12562 182 RCQRICDQWDHLGALTQQRRHALDE 206 (599)
Q Consensus 182 ~~~~l~~rw~~L~~~~~~R~~~L~~ 206 (599)
++..|+.+|..|...+..|...|++
T Consensus 81 ~~~~l~~~w~~l~~~~~~r~~~Lee 105 (105)
T PF00435_consen 81 KLEELNQRWEALCELVEERRQKLEE 105 (105)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 9999999999999999999999874
No 22
>KOG0036|consensus
Probab=99.20 E-value=1.9e-10 Score=110.55 Aligned_cols=133 Identities=17% Similarity=0.294 Sum_probs=114.8
Q ss_pred CCCHHHHHHHHHHHHhhcCCCCCCcCHHHHHHHHHHcCCC-CCCCCCCHHHHHHHHHHhCCCCCCccchHHHHHHHhhhc
Q psy12562 449 GITQEQLNEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYS-IGKDRQGEIDFQRILAVVDPNSTGYVHFDAFLDFMTRES 527 (599)
Q Consensus 449 ~~~~~~~~~~~~~F~~~d~~~~g~l~~~e~~~~l~~~g~~-~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~ 527 (599)
+..++...+++.+|+.||.+++|.++..++...+.+++.+ + .......+|+..|.|.+|.|+|.+|..++...
T Consensus 7 ~~~~er~~r~~~lf~~lD~~~~g~~d~~~l~k~~~~l~~~~~-----~~~~~~~l~~~~d~~~dg~vDy~eF~~Y~~~~- 80 (463)
T KOG0036|consen 7 ETDEERDIRIRCLFKELDSKNDGQVDLDQLEKGLEKLDHPKP-----NYEAAKMLFSAMDANRDGRVDYSEFKRYLDNK- 80 (463)
T ss_pred CCcHHHHHHHHHHHHHhccCCCCceeHHHHHHHHHhcCCCCC-----chHHHHHHHHhcccCcCCcccHHHHHHHHHHh-
Confidence 3456667889999999999999999999999999998776 6 77888899999999999999999999999753
Q ss_pred CCCCCHHHHHHHHHhhhCC-CCCcCHHHHhccC-------CcchHHHHHHhcCCCCCCCCCCCCccHHHHHHHhhcCC
Q psy12562 528 TDTDTAEQVIDSFRILAGD-KPYILPDELRREL-------PPDQAEYCIQRMPPYKGPNAIPGALDYQSFSTALYGES 597 (599)
Q Consensus 528 ~~~~~~~~~~~~F~~~D~d-~G~it~~el~~~l-------~~~~~~~~~~~~~~~~d~~~~dg~i~~~eF~~~~~~~~ 597 (599)
+..+...|..+|.+ +|.|+..|+...+ +.+++..++..| |.+| ++.|++++|-+.+...|
T Consensus 81 -----E~~l~~~F~~iD~~hdG~i~~~Ei~~~l~~~gi~l~de~~~k~~e~~----d~~g-~~~I~~~e~rd~~ll~p 148 (463)
T KOG0036|consen 81 -----ELELYRIFQSIDLEHDGKIDPNEIWRYLKDLGIQLSDEKAAKFFEHM----DKDG-KATIDLEEWRDHLLLYP 148 (463)
T ss_pred -----HHHHHHHHhhhccccCCccCHHHHHHHHHHhCCccCHHHHHHHHHHh----ccCC-CeeeccHHHHhhhhcCC
Confidence 46899999999999 9999999999876 456677666666 7777 89999999999887654
No 23
>KOG4223|consensus
Probab=99.13 E-value=2.8e-10 Score=106.63 Aligned_cols=137 Identities=15% Similarity=0.215 Sum_probs=106.3
Q ss_pred HHHHHHHHHhhcCCCCCCcCHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhCCCCCCccchHHHHHHHhhhcCCC----
Q psy12562 455 LNEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPNSTGYVHFDAFLDFMTRESTDT---- 530 (599)
Q Consensus 455 ~~~~~~~F~~~d~~~~g~l~~~e~~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~---- 530 (599)
..++..+|..+|.+++|.|+..++..++...-... .......-+..+|.+.+|.|+|++|...+......+
T Consensus 76 ~~rl~~l~~~iD~~~Dgfv~~~El~~wi~~s~k~~-----v~~~~~~~~~~~d~~~Dg~i~~eey~~~~~~~~~~~~~~~ 150 (325)
T KOG4223|consen 76 QERLGKLVPKIDSDSDGFVTESELKAWIMQSQKKY-----VVEEAARRWDEYDKNKDGFITWEEYLPQTYGRVDLPDEFP 150 (325)
T ss_pred HHHHHHHHhhhcCCCCCceeHHHHHHHHHHHHHHH-----HHHHHHHHHHHhccCccceeeHHHhhhhhhhcccCccccc
Confidence 36788999999999999999999999986653333 345566778889999999999999999887531100
Q ss_pred C-----CHH----HHHHHHHhhhCC-CCCcCHHHHhccCCcchHHH----HHHhcCCCCCCCCCCCCccHHHHHHHhhcC
Q psy12562 531 D-----TAE----QVIDSFRILAGD-KPYILPDELRRELPPDQAEY----CIQRMPPYKGPNAIPGALDYQSFSTALYGE 596 (599)
Q Consensus 531 ~-----~~~----~~~~~F~~~D~d-~G~it~~el~~~l~~~~~~~----~~~~~~~~~d~~~~dg~i~~~eF~~~~~~~ 596 (599)
. +.. .-..-|+..|.| +|.+|++||..+|+|++... ++.+-+...|.|| ||.|+++||+..||..
T Consensus 151 d~e~~~~~~km~~rDe~rFk~AD~d~dg~lt~EEF~aFLHPEe~p~M~~iVi~Etl~d~Dkn~-DG~I~~eEfigd~~~~ 229 (325)
T KOG4223|consen 151 DEEDNEEYKKMIARDEERFKAADQDGDGSLTLEEFTAFLHPEEHPHMKDIVIAETLEDIDKNG-DGKISLEEFIGDLYSH 229 (325)
T ss_pred cchhcHHHHHHHHHHHHHHhhcccCCCCcccHHHHHhccChhhcchHHHHHHHHHHhhcccCC-CCceeHHHHHhHHhhc
Confidence 0 111 234579999999 99999999999998765443 4555555678888 9999999999999976
Q ss_pred C
Q psy12562 597 S 597 (599)
Q Consensus 597 ~ 597 (599)
.
T Consensus 230 ~ 230 (325)
T KOG4223|consen 230 E 230 (325)
T ss_pred c
Confidence 4
No 24
>KOG0038|consensus
Probab=99.10 E-value=3.6e-10 Score=92.18 Aligned_cols=143 Identities=18% Similarity=0.270 Sum_probs=104.8
Q ss_pred ccCCCHHHHHHHHHHHHhhcCCC-----------CCCcCHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhCCCCCCccc
Q psy12562 447 SKGITQEQLNEFRASFNHFDKNR-----------TGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPNSTGYVH 515 (599)
Q Consensus 447 ~~~~~~~~~~~~~~~F~~~d~~~-----------~g~l~~~e~~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~I~ 515 (599)
.+-++...+-++..-|..+.++. .-.++.+.+.. |..+..+| .-++|...|..||.|.++
T Consensus 19 CTFFtrKdIlrl~~Rf~~L~P~lVP~~~~~~~~~~v~vp~e~i~k-MPELkenp--------fk~ri~e~FSeDG~Gnls 89 (189)
T KOG0038|consen 19 CTFFTRKDILRLHKRFYELAPHLVPTDMTGNRPPIVKVPFELIEK-MPELKENP--------FKRRICEVFSEDGRGNLS 89 (189)
T ss_pred cccccHHHHHHHHHHHHHhCcccccccccCCCCCceeecHHHHhh-ChhhhcCh--------HHHHHHHHhccCCCCccc
Confidence 45566666555555555554431 11333333322 23333333 345677888889999999
Q ss_pred hHHHHHHHhhhcCCCCCHHHHHHHHHhhhCC-CCCcCHHHHhccC--------CcchHHHHHHhcCCCCCCCCCCCCccH
Q psy12562 516 FDAFLDFMTRESTDTDTAEQVIDSFRILAGD-KPYILPDELRREL--------PPDQAEYCIQRMPPYKGPNAIPGALDY 586 (599)
Q Consensus 516 ~~eF~~~~~~~~~~~~~~~~~~~~F~~~D~d-~G~it~~el~~~l--------~~~~~~~~~~~~~~~~d~~~~dg~i~~ 586 (599)
|++|+.++..........=.+.-||+.||-| +++|...+|...+ +++++..++.+++..+|.|| ||.++|
T Consensus 90 fddFlDmfSV~sE~APrdlK~~YAFkIYDfd~D~~i~~~DL~~~l~~lTr~eLs~eEv~~i~ekvieEAD~Dg-Dgkl~~ 168 (189)
T KOG0038|consen 90 FDDFLDMFSVFSEMAPRDLKAKYAFKIYDFDGDEFIGHDDLEKTLTSLTRDELSDEEVELICEKVIEEADLDG-DGKLSF 168 (189)
T ss_pred HHHHHHHHHHHHhhChHHhhhhheeEEeecCCCCcccHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHhcCCC-CCcccH
Confidence 9999999987543333334677899999999 9999999998865 67899999999999999999 999999
Q ss_pred HHHHHHhhcCCCC
Q psy12562 587 QSFSTALYGESDL 599 (599)
Q Consensus 587 ~eF~~~~~~~~~~ 599 (599)
.+|...+.+.|++
T Consensus 169 ~eFe~~i~raPDF 181 (189)
T KOG0038|consen 169 AEFEHVILRAPDF 181 (189)
T ss_pred HHHHHHHHhCcch
Confidence 9999999998864
No 25
>PLN02964 phosphatidylserine decarboxylase
Probab=99.08 E-value=5.6e-10 Score=117.84 Aligned_cols=102 Identities=23% Similarity=0.276 Sum_probs=90.9
Q ss_pred cCCCHHHHHHHHHHHHhhcCCCCCCcCHHHHHHHHHHcC-CCCCCCCCCHHH---HHHHHHHhCCCCCCccchHHHHHHH
Q psy12562 448 KGITQEQLNEFRASFNHFDKNRTGRLAPEEFKSCLVSLG-YSIGKDRQGEID---FQRILAVVDPNSTGYVHFDAFLDFM 523 (599)
Q Consensus 448 ~~~~~~~~~~~~~~F~~~d~~~~g~l~~~e~~~~l~~~g-~~~~~~~~~~~~---~~~~~~~~d~~~~g~I~~~eF~~~~ 523 (599)
+.++..+++++++.|..+|+|++|.+ +..+++.+| ..| ++.+ +..+|..+|.+++|.|+|+||+.++
T Consensus 135 t~f~~kqi~elkeaF~lfD~dgdG~i----Lg~ilrslG~~~p-----te~e~~fi~~mf~~~D~DgdG~IdfdEFl~lL 205 (644)
T PLN02964 135 FDFVTQEPESACESFDLLDPSSSNKV----VGSIFVSCSIEDP-----VETERSFARRILAIVDYDEDGQLSFSEFSDLI 205 (644)
T ss_pred hhccHHHHHHHHHHHHHHCCCCCCcC----HHHHHHHhCCCCC-----CHHHHHHHHHHHHHhCCCCCCeEcHHHHHHHH
Confidence 45777888999999999999999996 999999999 577 7666 7899999999999999999999999
Q ss_pred hhhcCCCCCHHHHHHHHHhhhCC-CCCcCHHHHhccC
Q psy12562 524 TRESTDTDTAEQVIDSFRILAGD-KPYILPDELRREL 559 (599)
Q Consensus 524 ~~~~~~~~~~~~~~~~F~~~D~d-~G~it~~el~~~l 559 (599)
... ....+.+++..+|+.||.| +|+|+.+||..+|
T Consensus 206 ~~l-g~~~seEEL~eaFk~fDkDgdG~Is~dEL~~vL 241 (644)
T PLN02964 206 KAF-GNLVAANKKEELFKAADLNGDGVVTIDELAALL 241 (644)
T ss_pred HHh-ccCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHH
Confidence 863 4456778999999999999 9999999999986
No 26
>smart00150 SPEC Spectrin repeats.
Probab=99.07 E-value=1.7e-10 Score=94.48 Aligned_cols=99 Identities=16% Similarity=0.357 Sum_probs=89.0
Q ss_pred HHHhhhhhhhhhhhhHHHhhHHHHhhcHHHHHHHHHHhHHHHhhHHHHHHHHhHHHHHHHHHHHHHHhhcCCCCCCCCCC
Q psy12562 221 FAKRAAPFNNWLDGTREDLVDMFIVHTMEEIQGLIDAHSQFKATLGEADKEYNSIVNLVREVESTVQQYQIPGGLENPYT 300 (599)
Q Consensus 221 f~~~~~~l~~Wl~~~~~~l~~~~~~~~~~~v~~ll~~h~~l~~el~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~ 300 (599)
|...+..+..||.+++..+.+.++|.|+..++.++++|+.|+.++..+.+.+..+..+++.+... ++ .+...+
T Consensus 3 f~~~~~~l~~Wl~~~e~~l~~~~~~~d~~~~~~~~~~~~~~~~e~~~~~~~v~~~~~~~~~L~~~---~~----~~~~~i 75 (101)
T smart00150 3 FLRDADELEAWLSEKEALLASEDLGKDLESVEALLKKHEALEAELEAHEERVEALNELGEQLIEE---GH----PDAEEI 75 (101)
T ss_pred hHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHc---CC----CcHHHH
Confidence 99999999999999999998888999999999999999999999999999999999999886543 11 256678
Q ss_pred CCChHHHHHHHHHHHHhhHhHhHHHH
Q psy12562 301 ALTANDLTKKWTDVRKLVPQRDTTLQ 326 (599)
Q Consensus 301 ~~~~~~l~~~w~~L~~~~~~R~~~L~ 326 (599)
...+..|+.+|+.|+..+..|...|+
T Consensus 76 ~~~~~~l~~~w~~l~~~~~~r~~~L~ 101 (101)
T smart00150 76 EERLEELNERWEELKELAEERRQKLE 101 (101)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 88999999999999999999998874
No 27
>KOG0037|consensus
Probab=99.06 E-value=3.2e-09 Score=94.05 Aligned_cols=84 Identities=23% Similarity=0.479 Sum_probs=78.8
Q ss_pred HHHHHHHHhhcCCCCCCcCHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhCCCCCCccchHHHHHHHhhhcCCCCCHHH
Q psy12562 456 NEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPNSTGYVHFDAFLDFMTRESTDTDTAEQ 535 (599)
Q Consensus 456 ~~~~~~F~~~d~~~~g~l~~~e~~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~ 535 (599)
..|+.+|..||.|++|+|+..||..+|..+|+.+ +....+-+++.+|+.++|.|.|++|+.++..+ ..
T Consensus 124 ~~Wr~vF~~~D~D~SG~I~~sEL~~Al~~~Gy~L-----spq~~~~lv~kyd~~~~g~i~FD~FI~ccv~L-------~~ 191 (221)
T KOG0037|consen 124 NQWRNVFRTYDRDRSGTIDSSELRQALTQLGYRL-----SPQFYNLLVRKYDRFGGGRIDFDDFIQCCVVL-------QR 191 (221)
T ss_pred HHHHHHHHhcccCCCCcccHHHHHHHHHHcCcCC-----CHHHHHHHHHHhccccCCceeHHHHHHHHHHH-------HH
Confidence 7899999999999999999999999999999999 99999999999998889999999999999884 68
Q ss_pred HHHHHHhhhCC-CCCcC
Q psy12562 536 VIDSFRILAGD-KPYIL 551 (599)
Q Consensus 536 ~~~~F~~~D~d-~G~it 551 (599)
+.++|+.+|++ .|.|+
T Consensus 192 lt~~Fr~~D~~q~G~i~ 208 (221)
T KOG0037|consen 192 LTEAFRRRDTAQQGSIT 208 (221)
T ss_pred HHHHHHHhccccceeEE
Confidence 89999999999 99754
No 28
>cd05022 S-100A13 S-100A13: S-100A13 domain found in proteins similar to S100A13. S100A13 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A13 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100A13 is involved in the cellular export of interleukin-1 (IL-1) and of fibroblast growth factor-1 (FGF-1), which plays an important role in angiogenesis and tissue regeneration. Export is based on the CuII-dependent formation of multiprotein complexes containing the S100A13 protein. Assembly of these complexes occurs near the inner surface of the plasma membrane. Binding of two Ca(II) ions per monomer triggers key conformational changes leading to the creation of two identical and symmetrical Cu(II)-binding sites on the surface of the protein, close to the interface between the two monomers. These Cu
Probab=99.00 E-value=1.5e-09 Score=84.83 Aligned_cols=67 Identities=15% Similarity=0.299 Sum_probs=61.6
Q ss_pred HHHHHHHHHhhcC-CCCCCcCHHHHHHHHHH-cCCCCCCCCCCH-HHHHHHHHHhCCCCCCccchHHHHHHHhhh
Q psy12562 455 LNEFRASFNHFDK-NRTGRLAPEEFKSCLVS-LGYSIGKDRQGE-IDFQRILAVVDPNSTGYVHFDAFLDFMTRE 526 (599)
Q Consensus 455 ~~~~~~~F~~~d~-~~~g~l~~~e~~~~l~~-~g~~~~~~~~~~-~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~ 526 (599)
+..+..+|..||+ +++|+|+..+|+.++.. +|..+ +. .+++.+++.+|.|+||.|+|+||+.++...
T Consensus 7 i~~l~~~F~~fd~~~~~g~i~~~ELk~ll~~elg~~l-----s~~~~v~~mi~~~D~d~DG~I~F~EF~~l~~~l 76 (89)
T cd05022 7 IETLVSNFHKASVKGGKESLTASEFQELLTQQLPHLL-----KDVEGLEEKMKNLDVNQDSKLSFEEFWELIGEL 76 (89)
T ss_pred HHHHHHHHHHHhCCCCCCeECHHHHHHHHHHHhhhhc-----cCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHH
Confidence 4778999999999 99999999999999998 88777 66 899999999999999999999999998763
No 29
>PF00435 Spectrin: Spectrin repeat; InterPro: IPR002017 Spectrin repeats [] are found in several proteins involved in cytoskeletal structure. These include spectrin alpha and beta subunits [, ], alpha-actinin [] and dystrophin. The spectrin repeat forms a three-helix bundle. The second helix is interrupted by proline in some sequences. The repeats are defined by a characteristic tryptophan (W) residue at position 17 in helix A and a leucine (L) at 2 residues from the carboxyl end of helix C.; GO: 0005515 protein binding; PDB: 1HCI_A 1QUU_A 3FB2_B 1S35_A 1U5P_A 1U4Q_A 1CUN_B 1YDI_B 3EDV_A 1AJ3_A ....
Probab=98.97 E-value=1.7e-09 Score=89.16 Aligned_cols=102 Identities=16% Similarity=0.322 Sum_probs=90.5
Q ss_pred HHHHHhhhhhhhhhhhhHHHhhHHHHhhcHHHHHHHHHHhHHHHhhHHHHHHHHhHHHHHHHHHHHHHHhhcCCCCCCCC
Q psy12562 219 LEFAKRAAPFNNWLDGTREDLVDMFIVHTMEEIQGLIDAHSQFKATLGEADKEYNSIVNLVREVESTVQQYQIPGGLENP 298 (599)
Q Consensus 219 ~~f~~~~~~l~~Wl~~~~~~l~~~~~~~~~~~v~~ll~~h~~l~~el~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~ 298 (599)
..|...++++..||..++..|.+.+.+.++..++.++.+|+.|+.++..+.+.++.|...+..+..... .+.+
T Consensus 4 ~~f~~~~~~l~~Wl~~~e~~l~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~l~~l~~~~~~L~~~~~-------~~~~ 76 (105)
T PF00435_consen 4 QQFQQEADELLDWLQETEAKLSSSEPGSDLEELEEQLKKHKELQEEIESRQERLESLNEQAQQLIDSGP-------EDSD 76 (105)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCSCTHSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTH-------TTHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHcCC-------CcHH
Confidence 349999999999999999999887779999999999999999999999999999999998888633221 2566
Q ss_pred CCCCChHHHHHHHHHHHHhhHhHhHHHHH
Q psy12562 299 YTALTANDLTKKWTDVRKLVPQRDTTLQA 327 (599)
Q Consensus 299 ~~~~~~~~l~~~w~~L~~~~~~R~~~L~~ 327 (599)
.+...+..|+.+|..|+..+..|...|++
T Consensus 77 ~i~~~~~~l~~~w~~l~~~~~~r~~~Lee 105 (105)
T PF00435_consen 77 EIQEKLEELNQRWEALCELVEERRQKLEE 105 (105)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 77889999999999999999999999975
No 30
>PF13499 EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A 1TN4_A 1A2X_A 2CT9_B 2OTG_B 2OS8_B 1SNL_A 3O4Y_A 3J04_E ....
Probab=98.94 E-value=2.5e-09 Score=79.74 Aligned_cols=66 Identities=30% Similarity=0.646 Sum_probs=54.6
Q ss_pred HHHHHHHhhcCCCCCCcCHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhCCCCCCccchHHHHHHH
Q psy12562 457 EFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPNSTGYVHFDAFLDFM 523 (599)
Q Consensus 457 ~~~~~F~~~d~~~~g~l~~~e~~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~ 523 (599)
+++.+|..+|.|++|+|+.+||..++..++...+ +......+..+|+.+|++++|.|+|+||+.+|
T Consensus 1 ~l~~~F~~~D~d~~G~i~~~el~~~~~~~~~~~~-~~~~~~~~~~~~~~~D~d~dG~i~~~Ef~~~~ 66 (66)
T PF13499_consen 1 RLKEAFKKFDKDGDGYISKEELRRALKHLGRDMS-DEESDEMIDQIFREFDTDGDGRISFDEFLNFM 66 (66)
T ss_dssp HHHHHHHHHSTTSSSEEEHHHHHHHHHHTTSHST-HHHHHHHHHHHHHHHTTTSSSSEEHHHHHHHH
T ss_pred CHHHHHHHHcCCccCCCCHHHHHHHHHHhccccc-HHHHHHHHHHHHHHhCCCCcCCCcHHHHhccC
Confidence 4688999999999999999999999999987650 00133455566999999999999999999875
No 31
>cd05027 S-100B S-100B: S-100B domain found in proteins similar to S100B. S100B is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100B group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100B is most abundant in glial cells of the central nervous system, predominately in astrocytes. S100B is involved in signal transduction via the inhibition of protein phoshorylation, regulation of enzyme activity and by affecting the calcium homeostasis. Upon calcium binding the S100B homodimer changes conformation to expose a hydrophobic cleft, which represents the interaction site of S100B with its more than 20 known target proteins. These target proteins include several cellular architecture proteins such as tubulin and GFAP; S100B can inhibit polymerization of these oligomeric molecules. Furthermore, S100B i
Probab=98.93 E-value=5.7e-09 Score=81.79 Aligned_cols=66 Identities=15% Similarity=0.357 Sum_probs=61.0
Q ss_pred HHHHHHHHHhhc-CCCCC-CcCHHHHHHHHHH-----cCCCCCCCCCCHHHHHHHHHHhCCCCCCccchHHHHHHHhh
Q psy12562 455 LNEFRASFNHFD-KNRTG-RLAPEEFKSCLVS-----LGYSIGKDRQGEIDFQRILAVVDPNSTGYVHFDAFLDFMTR 525 (599)
Q Consensus 455 ~~~~~~~F~~~d-~~~~g-~l~~~e~~~~l~~-----~g~~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~ 525 (599)
+..+.++|..|| .+++| +|+..+|+.+|+. +|..+ +..++..+++.+|+|++|.|+|++|+.++..
T Consensus 7 ~~~l~~aF~~fD~~dgdG~~I~~~eL~~ll~~~~~~~lg~~~-----~~~~v~~~i~~~D~n~dG~v~f~eF~~li~~ 79 (88)
T cd05027 7 MVALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIK-----EQEVVDKVMETLDSDGDGECDFQEFMAFVAM 79 (88)
T ss_pred HHHHHHHHHHhcccCCCcCEECHHHHHHHHHHHhHHHhcCCC-----CHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 377899999998 79999 5999999999998 88888 8899999999999999999999999998865
No 32
>KOG0027|consensus
Probab=98.86 E-value=2e-08 Score=88.53 Aligned_cols=104 Identities=17% Similarity=0.279 Sum_probs=87.9
Q ss_pred HHHHHHHHhhcCCCCCCcCHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhCCCCCCccchHHHHHHHhhhcCCCCCHHH
Q psy12562 456 NEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPNSTGYVHFDAFLDFMTRESTDTDTAEQ 535 (599)
Q Consensus 456 ~~~~~~F~~~d~~~~g~l~~~e~~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~ 535 (599)
.++..++..+|.+++|.|++.+|..++...+........+..++...|+.||.+++|.|+..|+..++.. +....+.+.
T Consensus 44 ~el~~~~~~~D~dg~g~I~~~eF~~l~~~~~~~~~~~~~~~~el~eaF~~fD~d~~G~Is~~el~~~l~~-lg~~~~~~e 122 (151)
T KOG0027|consen 44 EELRDLIKEIDLDGDGTIDFEEFLDLMEKLGEEKTDEEASSEELKEAFRVFDKDGDGFISASELKKVLTS-LGEKLTDEE 122 (151)
T ss_pred HHHHHHHHHhCCCCCCeEcHHHHHHHHHhhhcccccccccHHHHHHHHHHHccCCCCcCcHHHHHHHHHH-hCCcCCHHH
Confidence 6779999999999999999999999998776543111124568999999999999999999999999987 445566899
Q ss_pred HHHHHHhhhCC-CCCcCHHHHhccCC
Q psy12562 536 VIDSFRILAGD-KPYILPDELRRELP 560 (599)
Q Consensus 536 ~~~~F~~~D~d-~G~it~~el~~~l~ 560 (599)
+...++.+|.| +|+|+..+|..+++
T Consensus 123 ~~~mi~~~d~d~dg~i~f~ef~~~m~ 148 (151)
T KOG0027|consen 123 CKEMIREVDVDGDGKVNFEEFVKMMS 148 (151)
T ss_pred HHHHHHhcCCCCCCeEeHHHHHHHHh
Confidence 99999999999 99999999987654
No 33
>KOG4223|consensus
Probab=98.85 E-value=2e-08 Score=94.44 Aligned_cols=131 Identities=17% Similarity=0.225 Sum_probs=96.5
Q ss_pred HHHHHHHHHhhcCCCCCCcCHHHHHHHHHHcC-CCCCCCCCCHHHHHHHHHHhCCCCCCccchHHHHHHHhhhcCCCCCH
Q psy12562 455 LNEFRASFNHFDKNRTGRLAPEEFKSCLVSLG-YSIGKDRQGEIDFQRILAVVDPNSTGYVHFDAFLDFMTRESTDTDTA 533 (599)
Q Consensus 455 ~~~~~~~F~~~d~~~~g~l~~~e~~~~l~~~g-~~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~ 533 (599)
+..-...|+.-|.|++|.++.+||.+.+.=-. -.+ ..-.|..-+...|+|+||.|+++||+.-|..........
T Consensus 162 ~~rDe~rFk~AD~d~dg~lt~EEF~aFLHPEe~p~M-----~~iVi~Etl~d~Dkn~DG~I~~eEfigd~~~~~~~~~ep 236 (325)
T KOG4223|consen 162 IARDEERFKAADQDGDGSLTLEEFTAFLHPEEHPHM-----KDIVIAETLEDIDKNGDGKISLEEFIGDLYSHEGNEEEP 236 (325)
T ss_pred HHHHHHHHhhcccCCCCcccHHHHHhccChhhcchH-----HHHHHHHHHhhcccCCCCceeHHHHHhHHhhccCCCCCc
Confidence 35567899999999999999999999873211 112 345566778889999999999999999887643221111
Q ss_pred ----HHHHHHHHhhhCC-CCCcCHHHHhccCCcc---hHHHHHHhcCCCCCCCCCCCCccHHHHHH
Q psy12562 534 ----EQVIDSFRILAGD-KPYILPDELRRELPPD---QAEYCIQRMPPYKGPNAIPGALDYQSFST 591 (599)
Q Consensus 534 ----~~~~~~F~~~D~d-~G~it~~el~~~l~~~---~~~~~~~~~~~~~d~~~~dg~i~~~eF~~ 591 (599)
.+-...|..+|.| +|+++.+|++..+-|. ....-...++-..|.|+ ||.+|++|-+.
T Consensus 237 eWv~~Ere~F~~~~DknkDG~L~~dEl~~WI~P~~~d~A~~EA~hL~~eaD~dk-D~kLs~eEIl~ 301 (325)
T KOG4223|consen 237 EWVLTEREQFFEFRDKNKDGKLDGDELLDWILPSEQDHAKAEARHLLHEADEDK-DGKLSKEEILE 301 (325)
T ss_pred ccccccHHHHHHHhhcCCCCccCHHHHhcccCCCCccHHHHHHHHHhhhhccCc-cccccHHHHhh
Confidence 2334667788999 9999999999987442 23333445566668888 99999999775
No 34
>smart00027 EH Eps15 homology domain. Pair of EF hand motifs that recognise proteins containing Asn-Pro-Phe (NPF) sequences.
Probab=98.81 E-value=2.5e-08 Score=80.35 Aligned_cols=70 Identities=23% Similarity=0.364 Sum_probs=63.8
Q ss_pred CCCHHHHHHHHHHHHhhcCCCCCCcCHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhCCCCCCccchHHHHHHHhh
Q psy12562 449 GITQEQLNEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPNSTGYVHFDAFLDFMTR 525 (599)
Q Consensus 449 ~~~~~~~~~~~~~F~~~d~~~~g~l~~~e~~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~ 525 (599)
.++.+++..+..+|..||.+++|.|+..++..+++.+| + +..++..++..+|.+++|.|+|++|+.++..
T Consensus 3 ~ls~~~~~~l~~~F~~~D~d~~G~Is~~el~~~l~~~~--~-----~~~ev~~i~~~~d~~~~g~I~~~eF~~~~~~ 72 (96)
T smart00027 3 AISPEDKAKYEQIFRSLDKNQDGTVTGAQAKPILLKSG--L-----PQTLLAKIWNLADIDNDGELDKDEFALAMHL 72 (96)
T ss_pred CCCHHHHHHHHHHHHHhCCCCCCeEeHHHHHHHHHHcC--C-----CHHHHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence 36788899999999999999999999999999999876 4 6778999999999999999999999998864
No 35
>KOG0044|consensus
Probab=98.77 E-value=7.7e-08 Score=86.05 Aligned_cols=140 Identities=16% Similarity=0.228 Sum_probs=99.3
Q ss_pred chHHHHHHHHHHhhcccccCCCccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCHHHHHHHHHHHHhhcCCCC
Q psy12562 391 HIEELEKIHQAVQEGMIFENRYTQYTMETLRVGWEQLLTSINRNINEVENQILTRDSKGITQEQLNEFRASFNHFDKNRT 470 (599)
Q Consensus 391 ~~~~l~~~~~~l~~~~~~~~~~~~~~~~~l~~~w~~l~~~~~~r~~~Le~~~~~~~~~~~~~~~~~~~~~~F~~~d~~~~ 470 (599)
....|..+++.+.. +.|.+....++....+..+.. ......-...+|+.||.|++
T Consensus 24 ~~~ei~~~Yr~Fk~----~cP~G~~~~~~F~~i~~~~fp---------------------~gd~~~y~~~vF~~fD~~~d 78 (193)
T KOG0044|consen 24 SKKEIQQWYRGFKN----ECPSGRLTLEEFREIYASFFP---------------------DGDASKYAELVFRTFDKNKD 78 (193)
T ss_pred CHHHHHHHHHHhcc----cCCCCccCHHHHHHHHHHHCC---------------------CCCHHHHHHHHHHHhcccCC
Confidence 44567777777766 566666666663333333211 11122345789999999999
Q ss_pred CCcCHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhCCCCCCccchHHHHHHHhhhc---C-------CCCCHHHHHHHH
Q psy12562 471 GRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPNSTGYVHFDAFLDFMTRES---T-------DTDTAEQVIDSF 540 (599)
Q Consensus 471 g~l~~~e~~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~---~-------~~~~~~~~~~~F 540 (599)
|.|++.||..++..+--.. .+.-....|+.+|.||+|.|+++|++.++.... . .....+.+..+|
T Consensus 79 g~i~F~Efi~als~~~rGt-----~eekl~w~F~lyD~dgdG~It~~Eml~iv~~i~~m~~~~~~~~~~~~~~~~v~~if 153 (193)
T KOG0044|consen 79 GTIDFLEFICALSLTSRGT-----LEEKLKWAFRLYDLDGDGYITKEEMLKIVQAIYQMTGSKALPEDEETPEERVDKIF 153 (193)
T ss_pred CCcCHHHHHHHHHHHcCCc-----HHHHhhhhheeecCCCCceEcHHHHHHHHHHHHHHcccccCCcccccHHHHHHHHH
Confidence 9999999888875542222 355566779999999999999999999875431 1 112346788899
Q ss_pred HhhhCC-CCCcCHHHHhccCC
Q psy12562 541 RILAGD-KPYILPDELRRELP 560 (599)
Q Consensus 541 ~~~D~d-~G~it~~el~~~l~ 560 (599)
+.+|.| +|.||.+||.....
T Consensus 154 ~k~D~n~Dg~lT~eef~~~~~ 174 (193)
T KOG0044|consen 154 SKMDKNKDGKLTLEEFIEGCK 174 (193)
T ss_pred HHcCCCCCCcccHHHHHHHhh
Confidence 999999 99999999998764
No 36
>COG5126 FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only]
Probab=98.76 E-value=6.2e-08 Score=83.47 Aligned_cols=97 Identities=15% Similarity=0.239 Sum_probs=84.7
Q ss_pred HHHHHHHHhhcCCCCCCcCHHHHHHHHHH-cCCCCCCCCCCHHHHHHHHHHhCCCCCCccchHHHHHHHhhhcCCCCCHH
Q psy12562 456 NEFRASFNHFDKNRTGRLAPEEFKSCLVS-LGYSIGKDRQGEIDFQRILAVVDPNSTGYVHFDAFLDFMTRESTDTDTAE 534 (599)
Q Consensus 456 ~~~~~~F~~~d~~~~g~l~~~e~~~~l~~-~g~~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~ 534 (599)
..+.++|..+|. +.|.|++.+|..+|.. +.... +.+++...|+.||.|++|+|++.+++.++.. +....+.+
T Consensus 56 ~ei~~l~~~~d~-~~~~idf~~Fl~~ms~~~~~~~-----~~Eel~~aF~~fD~d~dG~Is~~eL~~vl~~-lge~~~de 128 (160)
T COG5126 56 AEINKLFEEIDA-GNETVDFPEFLTVMSVKLKRGD-----KEEELREAFKLFDKDHDGYISIGELRRVLKS-LGERLSDE 128 (160)
T ss_pred HHHHHHHHhccC-CCCccCHHHHHHHHHHHhccCC-----cHHHHHHHHHHhCCCCCceecHHHHHHHHHh-hcccCCHH
Confidence 667888999998 9999999999999854 44455 7899999999999999999999999999875 55667789
Q ss_pred HHHHHHHhhhCC-CCCcCHHHHhccC
Q psy12562 535 QVIDSFRILAGD-KPYILPDELRREL 559 (599)
Q Consensus 535 ~~~~~F~~~D~d-~G~it~~el~~~l 559 (599)
++...++.+|.| +|+|+.++|...+
T Consensus 129 ev~~ll~~~d~d~dG~i~~~eF~~~~ 154 (160)
T COG5126 129 EVEKLLKEYDEDGDGEIDYEEFKKLI 154 (160)
T ss_pred HHHHHHHhcCCCCCceEeHHHHHHHH
Confidence 999999999999 9999999998754
No 37
>cd05029 S-100A6 S-100A6: S-100A6 domain found in proteins similar to S100A6. S100A6 is a member of the S100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A6 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100A6 is normally expressed in the G1 phase of the cell cycle in neuronal cells. The function of S100A6 remains unclear, but evidence suggests that it is involved in cell cycle regulation and exocytosis. S100A6 may also be involved in tumorigenesis; the protein is overexpressed in several tumors. Ca2+ binding to S100A6 leads to a conformational change in the protein, which exposes a hydrophobic surface for interact
Probab=98.72 E-value=7.1e-08 Score=75.61 Aligned_cols=69 Identities=16% Similarity=0.401 Sum_probs=61.1
Q ss_pred HHHHHHHHHHHhhcC-CC-CCCcCHHHHHHHHH---HcCCCCCCCCCCHHHHHHHHHHhCCCCCCccchHHHHHHHhhh
Q psy12562 453 EQLNEFRASFNHFDK-NR-TGRLAPEEFKSCLV---SLGYSIGKDRQGEIDFQRILAVVDPNSTGYVHFDAFLDFMTRE 526 (599)
Q Consensus 453 ~~~~~~~~~F~~~d~-~~-~g~l~~~e~~~~l~---~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~ 526 (599)
..+..+..+|..||. ++ +|+|+..||+.+++ .+|..+ +..++..+++.+|.|++|.|+|++|+.++...
T Consensus 7 ~~~~~~i~~F~~y~~~~~~~g~Is~~EL~~~l~~~~~lg~k~-----t~~ev~~m~~~~D~d~dG~Idf~EFv~lm~~l 80 (88)
T cd05029 7 QAIGLLVAIFHKYSGREGDKNTLSKKELKELIQKELTIGSKL-----QDAEIAKLMEDLDRNKDQEVNFQEYVTFLGAL 80 (88)
T ss_pred HHHHHHHHHHHHHHccCCCCCEECHHHHHHHHHHHHhcCCCC-----CHHHHHHHHHHhcCCCCCCCcHHHHHHHHHHH
Confidence 344678999999998 67 89999999999996 368888 99999999999999999999999999988763
No 38
>cd05025 S-100A1 S-100A1: S-100A1 domain found in proteins similar to S100A1. S100A1 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. As is the case with many other members of S100 protein family, S100A1 is implicated in intracellular and extracellular regulatory activities, including interaction with myosin-associated twitchin kinase, actin-capping protein CapZ, sinapsin I, and tubulin. Structural data suggests that S100A1 proteins exist within cells as antiparallel homodimers, while heterodimers with S100A4 and S100B also has been reported. Upon binding calcium S100A1 changes conformation to expose a hydrophobic cleft which is the interaction site of S100A1 with its more that 20 known target proteins.
Probab=98.70 E-value=9e-08 Score=76.38 Aligned_cols=66 Identities=21% Similarity=0.335 Sum_probs=58.3
Q ss_pred HHHHHHHHhhc-CCCCC-CcCHHHHHHHHHH-cC----CCCCCCCCCHHHHHHHHHHhCCCCCCccchHHHHHHHhhh
Q psy12562 456 NEFRASFNHFD-KNRTG-RLAPEEFKSCLVS-LG----YSIGKDRQGEIDFQRILAVVDPNSTGYVHFDAFLDFMTRE 526 (599)
Q Consensus 456 ~~~~~~F~~~d-~~~~g-~l~~~e~~~~l~~-~g----~~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~ 526 (599)
..++++|..|| .+++| .|+..+|+.+++. +| ..+ +...+..+++.+|++++|.|+|++|+.++...
T Consensus 9 ~~l~~~F~~fDd~dg~G~~Is~~El~~~l~~~lg~~~~~~~-----s~~~v~~i~~~~D~d~~G~I~f~eF~~l~~~~ 81 (92)
T cd05025 9 ETLINVFHAHSGKEGDKYKLSKKELKDLLQTELSDFLDAQK-----DADAVDKIMKELDENGDGEVDFQEFVVLVAAL 81 (92)
T ss_pred HHHHHHHHHHhcccCCCCeECHHHHHHHHHHHHHHHccCCC-----CHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHH
Confidence 67899999997 99999 5999999999975 54 345 78899999999999999999999999988653
No 39
>KOG0377|consensus
Probab=98.69 E-value=8.6e-08 Score=92.93 Aligned_cols=131 Identities=18% Similarity=0.326 Sum_probs=94.5
Q ss_pred HHHHHHHHhhcCCCCCCcCHHHHHHHHHH-cCCCCCCCCCCHHHHHHHHHHhCCCCCCccchHHHHHHHhhh-cCCC---
Q psy12562 456 NEFRASFNHFDKNRTGRLAPEEFKSCLVS-LGYSIGKDRQGEIDFQRILAVVDPNSTGYVHFDAFLDFMTRE-STDT--- 530 (599)
Q Consensus 456 ~~~~~~F~~~d~~~~g~l~~~e~~~~l~~-~g~~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~-~~~~--- 530 (599)
..+..-|+.+|++++|+|+...+..|+.. +|.++ ....+.. +.+..+.+|.|.|...+..+... +...
T Consensus 464 sdL~~eF~~~D~~ksG~lsis~Wa~~mE~i~~L~L-----PWr~L~~--kla~~s~d~~v~Y~~~~~~l~~e~~~~ea~~ 536 (631)
T KOG0377|consen 464 SDLEDEFRKYDPKKSGKLSISHWAKCMENITGLNL-----PWRLLRP--KLANGSDDGKVEYKSTLDNLDTEVILEEAGS 536 (631)
T ss_pred hHHHHHHHhcChhhcCeeeHHHHHHHHHHHhcCCC-----cHHHhhh--hccCCCcCcceehHhHHHHhhhhhHHHHHHh
Confidence 56788999999999999999999999965 47666 4333322 22334567889999887766421 1000
Q ss_pred -------CCHHHHHHHHHhhhCC-CCCcCHHHHhccC-------CcchHHHHHHhcCCCCCCCCCCCCccHHHHHHHhh
Q psy12562 531 -------DTAEQVIDSFRILAGD-KPYILPDELRREL-------PPDQAEYCIQRMPPYKGPNAIPGALDYQSFSTALY 594 (599)
Q Consensus 531 -------~~~~~~~~~F~~~D~d-~G~it~~el~~~l-------~~~~~~~~~~~~~~~~d~~~~dg~i~~~eF~~~~~ 594 (599)
.....+..+|+.+|.| +|.||.+||+.+. +-...+.++..+....|.|+ ||.|++.||+++++
T Consensus 537 slvetLYr~ks~LetiF~~iD~D~SG~isldEF~~a~~l~~sh~~~~i~~~~i~~la~~mD~Nk-DG~IDlNEfLeAFr 614 (631)
T KOG0377|consen 537 SLVETLYRNKSSLETIFNIIDADNSGEISLDEFRTAWKLLSSHMNGAISDDEILELARSMDLNK-DGKIDLNEFLEAFR 614 (631)
T ss_pred HHHHHHHhchhhHHHHHHHhccCCCCceeHHHHHHHHHHHHhhcCCCcCHHHHHHHHHhhccCC-CCcccHHHHHHHHh
Confidence 1124577899999999 9999999999864 22233344455556669998 99999999999875
No 40
>cd05031 S-100A10_like S-100A10_like: S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1_like group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=98.68 E-value=9e-08 Score=76.69 Aligned_cols=66 Identities=18% Similarity=0.412 Sum_probs=59.1
Q ss_pred HHHHHHHHHhhcC-CC-CCCcCHHHHHHHHHH-----cCCCCCCCCCCHHHHHHHHHHhCCCCCCccchHHHHHHHhh
Q psy12562 455 LNEFRASFNHFDK-NR-TGRLAPEEFKSCLVS-----LGYSIGKDRQGEIDFQRILAVVDPNSTGYVHFDAFLDFMTR 525 (599)
Q Consensus 455 ~~~~~~~F~~~d~-~~-~g~l~~~e~~~~l~~-----~g~~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~ 525 (599)
...+..+|..||. ++ +|.|+..+|..+++. +|..+ +..++..++..+|.+++|.|+|++|+.++..
T Consensus 7 ~~~l~~~F~~~D~~dg~dG~Is~~El~~~l~~~~g~~lg~~~-----s~~ei~~~~~~~D~~~dg~I~f~eF~~l~~~ 79 (94)
T cd05031 7 MESLILTFHRYAGKDGDKNTLSRKELKKLMEKELSEFLKNQK-----DPMAVDKIMKDLDQNRDGKVNFEEFVSLVAG 79 (94)
T ss_pred HHHHHHHHHHHhccCCCCCeECHHHHHHHHHHHhHHHhhccc-----cHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence 3678999999997 87 799999999999986 46677 8899999999999999999999999998865
No 41
>cd00213 S-100 S-100: S-100 domain, which represents the largest family within the superfamily of proteins carrying the Ca-binding EF-hand motif. Note that this S-100 hierarchy contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. Intracellularly, S100 proteins act as Ca-signaling or Ca-buffering proteins. The most unusual characteristic of certain S100 proteins is their occurrence in extracellular space, where they act in a cytokine-like manner through RAGE, the receptor for advanced glycation products. Structural data suggest that many S100 members exist within cells as homo- or heterodimers and even oligomers; oligomerization contributes to their functional diversification. Upon binding calcium, most S100 proteins change conformation to a more open structure exposing a hydrophobic cleft. This hydrophobic surface represents th
Probab=98.68 E-value=8.8e-08 Score=75.87 Aligned_cols=73 Identities=19% Similarity=0.368 Sum_probs=61.3
Q ss_pred HHHHHHHHHHHHhhcC--CCCCCcCHHHHHHHHHH-cCCCCCCCCCCHHHHHHHHHHhCCCCCCccchHHHHHHHhh
Q psy12562 452 QEQLNEFRASFNHFDK--NRTGRLAPEEFKSCLVS-LGYSIGKDRQGEIDFQRILAVVDPNSTGYVHFDAFLDFMTR 525 (599)
Q Consensus 452 ~~~~~~~~~~F~~~d~--~~~g~l~~~e~~~~l~~-~g~~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~ 525 (599)
++++..++.+|..||+ +++|.|+..+|..+++. +|..++. ..+...+..++..+|.+++|.|+|++|+.++..
T Consensus 4 ~~~~~~l~~~F~~~D~~~~~~G~Is~~el~~~l~~~~g~~~~~-~~~~~ei~~i~~~~d~~~~g~I~f~eF~~~~~~ 79 (88)
T cd00213 4 EKAIETIIDVFHKYSGKEGDKDTLSKKELKELLETELPNFLKN-QKDPEAVDKIMKDLDVNKDGKVDFQEFLVLIGK 79 (88)
T ss_pred HHHHHHHHHHHHHHhhccCCCCcCcHHHHHHHHHHHhhhhccC-CCCHHHHHHHHHHhccCCCCcCcHHHHHHHHHH
Confidence 4566889999999999 89999999999999976 5544310 015889999999999999999999999998865
No 42
>PTZ00183 centrin; Provisional
Probab=98.67 E-value=1.8e-07 Score=83.49 Aligned_cols=98 Identities=17% Similarity=0.249 Sum_probs=83.4
Q ss_pred HHHHHHHHhhcCCCCCCcCHHHHHHHHHHc-CCCCCCCCCCHHHHHHHHHHhCCCCCCccchHHHHHHHhhhcCCCCCHH
Q psy12562 456 NEFRASFNHFDKNRTGRLAPEEFKSCLVSL-GYSIGKDRQGEIDFQRILAVVDPNSTGYVHFDAFLDFMTRESTDTDTAE 534 (599)
Q Consensus 456 ~~~~~~F~~~d~~~~g~l~~~e~~~~l~~~-g~~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~ 534 (599)
..+..+|..+|.+++|.|+..+|..++... .... ....+..+|..+|.+++|.|++.+|..++... ....+.+
T Consensus 53 ~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~-----~~~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~-~~~l~~~ 126 (158)
T PTZ00183 53 EEIKQMIADVDKDGSGKIDFEEFLDIMTKKLGERD-----PREEILKAFRLFDDDKTGKISLKNLKRVAKEL-GETITDE 126 (158)
T ss_pred HHHHHHHHHhCCCCCCcEeHHHHHHHHHHHhcCCC-----cHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHh-CCCCCHH
Confidence 457899999999999999999999887543 3334 56788999999999999999999999998753 3346678
Q ss_pred HHHHHHHhhhCC-CCCcCHHHHhccC
Q psy12562 535 QVIDSFRILAGD-KPYILPDELRREL 559 (599)
Q Consensus 535 ~~~~~F~~~D~d-~G~it~~el~~~l 559 (599)
.+..+|..+|.+ +|.|+.++|..++
T Consensus 127 ~~~~~~~~~d~~~~g~i~~~ef~~~~ 152 (158)
T PTZ00183 127 ELQEMIDEADRNGDGEISEEEFYRIM 152 (158)
T ss_pred HHHHHHHHhCCCCCCcCcHHHHHHHH
Confidence 899999999999 9999999998776
No 43
>cd05026 S-100Z S-100Z: S-100Z domain found in proteins similar to S100Z. S100Z is a member of the S100 domain family within the EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100Z group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately.S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control. S100Z is normally expressed in various tissues, with its highest level of expression being in spleen and leukocytes. The function of S100Z remains unclear. Preliminary structural data suggests that S100Z is homodimer, however a heterodimer with S100P has been reported. S100Z is capable of binding calcium ions. When calcium binds to S110Z, the protein experiences a conformational change, which exposes hydrophobic surfac
Probab=98.66 E-value=1.3e-07 Score=75.21 Aligned_cols=67 Identities=19% Similarity=0.340 Sum_probs=57.4
Q ss_pred HHHHHHHHHhhc-CCCCC-CcCHHHHHHHHHH-cC----CCCCCCCCCHHHHHHHHHHhCCCCCCccchHHHHHHHhhh
Q psy12562 455 LNEFRASFNHFD-KNRTG-RLAPEEFKSCLVS-LG----YSIGKDRQGEIDFQRILAVVDPNSTGYVHFDAFLDFMTRE 526 (599)
Q Consensus 455 ~~~~~~~F~~~d-~~~~g-~l~~~e~~~~l~~-~g----~~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~ 526 (599)
+..+.++|..|| .|++| +|+..||+.++.. ++ ... +...+..+++.+|.|++|.|+|+||+.++..+
T Consensus 9 ~~~~~~~F~~~dd~dgdg~~Is~~EL~~ll~~~~~~~~~~~~-----~~~~v~~i~~elD~n~dG~Idf~EF~~l~~~l 82 (93)
T cd05026 9 MDTLIRIFHNYSGKEGDRYKLSKGELKELLQRELTDFLSSQK-----DPMLVDKIMNDLDSNKDNEVDFNEFVVLVAAL 82 (93)
T ss_pred HHHHHHHHHHHHccCCCCCEECHHHHHHHHHHHhHHhccccc-----CHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Confidence 467889999999 78998 5999999999976 33 233 67789999999999999999999999998764
No 44
>PF13833 EF-hand_8: EF-hand domain pair; PDB: 3KF9_A 1TTX_A 1WLZ_A 1ALV_A 1NX3_A 1ALW_A 1NX2_A 1NX1_A 1NX0_A 1DF0_A ....
Probab=98.62 E-value=8.9e-08 Score=67.93 Aligned_cols=52 Identities=33% Similarity=0.750 Sum_probs=48.6
Q ss_pred CCCCcCHHHHHHHHHHcCCC-CCCCCCCHHHHHHHHHHhCCCCCCccchHHHHHHHhh
Q psy12562 469 RTGRLAPEEFKSCLVSLGYS-IGKDRQGEIDFQRILAVVDPNSTGYVHFDAFLDFMTR 525 (599)
Q Consensus 469 ~~g~l~~~e~~~~l~~~g~~-~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~ 525 (599)
++|.|+.++|..++..+|.. + +..++..+|..+|.+++|.|+|+||+.++..
T Consensus 1 ~~G~i~~~~~~~~l~~~g~~~~-----s~~e~~~l~~~~D~~~~G~I~~~EF~~~~~~ 53 (54)
T PF13833_consen 1 KDGKITREEFRRALSKLGIKDL-----SEEEVDRLFREFDTDGDGYISFDEFISMMQR 53 (54)
T ss_dssp SSSEEEHHHHHHHHHHTTSSSS-----CHHHHHHHHHHHTTSSSSSEEHHHHHHHHHH
T ss_pred CcCEECHHHHHHHHHHhCCCCC-----CHHHHHHHHHhcccCCCCCCCHHHHHHHHHh
Confidence 47999999999999888998 9 9999999999999999999999999999864
No 45
>PTZ00184 calmodulin; Provisional
Probab=98.60 E-value=3.3e-07 Score=80.83 Aligned_cols=98 Identities=19% Similarity=0.248 Sum_probs=82.6
Q ss_pred HHHHHHHHhhcCCCCCCcCHHHHHHHHHHc-CCCCCCCCCCHHHHHHHHHHhCCCCCCccchHHHHHHHhhhcCCCCCHH
Q psy12562 456 NEFRASFNHFDKNRTGRLAPEEFKSCLVSL-GYSIGKDRQGEIDFQRILAVVDPNSTGYVHFDAFLDFMTRESTDTDTAE 534 (599)
Q Consensus 456 ~~~~~~F~~~d~~~~g~l~~~e~~~~l~~~-g~~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~ 534 (599)
..+..+|..+|.+++|.|+.++|..++... .... ....+..+|..+|.+++|.|+.++|..++... ....+.+
T Consensus 47 ~~~~~~~~~~d~~~~g~i~~~ef~~~l~~~~~~~~-----~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~-~~~~~~~ 120 (149)
T PTZ00184 47 AELQDMINEVDADGNGTIDFPEFLTLMARKMKDTD-----SEEEIKEAFKVFDRDGNGFISAAELRHVMTNL-GEKLTDE 120 (149)
T ss_pred HHHHHHHHhcCcCCCCcCcHHHHHHHHHHhccCCc-----HHHHHHHHHHhhCCCCCCeEeHHHHHHHHHHH-CCCCCHH
Confidence 567899999999999999999999988754 2233 45678899999999999999999999988663 3345678
Q ss_pred HHHHHHHhhhCC-CCCcCHHHHhccC
Q psy12562 535 QVIDSFRILAGD-KPYILPDELRREL 559 (599)
Q Consensus 535 ~~~~~F~~~D~d-~G~it~~el~~~l 559 (599)
.+..+|..+|.+ +|+|+..||..++
T Consensus 121 ~~~~~~~~~d~~~~g~i~~~ef~~~~ 146 (149)
T PTZ00184 121 EVDEMIREADVDGDGQINYEEFVKMM 146 (149)
T ss_pred HHHHHHHhcCCCCCCcCcHHHHHHHH
Confidence 899999999999 9999999998654
No 46
>PF14658 EF-hand_9: EF-hand domain
Probab=98.59 E-value=1.3e-07 Score=67.59 Aligned_cols=60 Identities=32% Similarity=0.588 Sum_probs=56.9
Q ss_pred HHHhhcCCCCCCcCHHHHHHHHHHcCC-CCCCCCCCHHHHHHHHHHhCCCCC-CccchHHHHHHHhh
Q psy12562 461 SFNHFDKNRTGRLAPEEFKSCLVSLGY-SIGKDRQGEIDFQRILAVVDPNST-GYVHFDAFLDFMTR 525 (599)
Q Consensus 461 ~F~~~d~~~~g~l~~~e~~~~l~~~g~-~~~~~~~~~~~~~~~~~~~d~~~~-g~I~~~eF~~~~~~ 525 (599)
.|..||.+++|.|...++..+|+++|. .| .+..++.+.+.+|++|. |.|+|+.|+..|..
T Consensus 3 ~F~~fD~~~tG~V~v~~l~~~Lra~~~~~p-----~e~~Lq~l~~elDP~g~~~~v~~d~F~~iM~~ 64 (66)
T PF14658_consen 3 AFDAFDTQKTGRVPVSDLITYLRAVTGRSP-----EESELQDLINELDPEGRDGSVNFDTFLAIMRD 64 (66)
T ss_pred chhhcCCcCCceEeHHHHHHHHHHHcCCCC-----cHHHHHHHHHHhCCCCCCceEeHHHHHHHHHH
Confidence 699999999999999999999999988 88 89999999999999998 99999999999865
No 47
>PF13499 EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A 1TN4_A 1A2X_A 2CT9_B 2OTG_B 2OS8_B 1SNL_A 3O4Y_A 3J04_E ....
Probab=98.56 E-value=2.4e-08 Score=74.35 Aligned_cols=57 Identities=19% Similarity=0.289 Sum_probs=26.7
Q ss_pred HHHHHHhCCCCCCccchHHHHHHHhhhcCCC---CCHHHHHHHHHhhhCC-CCCcCHHHHh
Q psy12562 500 QRILAVVDPNSTGYVHFDAFLDFMTRESTDT---DTAEQVIDSFRILAGD-KPYILPDELR 556 (599)
Q Consensus 500 ~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~---~~~~~~~~~F~~~D~d-~G~it~~el~ 556 (599)
..+|..+|.+++|.|+.+||..++....... ...+.+..+|+.+|.+ +|.|+.+||.
T Consensus 3 ~~~F~~~D~d~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~i~~~Ef~ 63 (66)
T PF13499_consen 3 KEAFKKFDKDGDGYISKEELRRALKHLGRDMSDEESDEMIDQIFREFDTDGDGRISFDEFL 63 (66)
T ss_dssp HHHHHHHSTTSSSEEEHHHHHHHHHHTTSHSTHHHHHHHHHHHHHHHTTTSSSSEEHHHHH
T ss_pred HHHHHHHcCCccCCCCHHHHHHHHHHhcccccHHHHHHHHHHHHHHhCCCCcCCCcHHHHh
Confidence 4455555555555555555555554422110 1112333345555555 5555555544
No 48
>cd00052 EH Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction. The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A hydrophobic binding pocket is formed by residues from both EF-hand motifs. The EH domain binds to proteins containing NPF (class I), [WF]W or SWG (class II), or H[TS]F (class III) sequence motifs.
Probab=98.56 E-value=2.3e-07 Score=69.28 Aligned_cols=60 Identities=18% Similarity=0.265 Sum_probs=54.3
Q ss_pred HHHHHhhcCCCCCCcCHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhCCCCCCccchHHHHHHHhh
Q psy12562 459 RASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPNSTGYVHFDAFLDFMTR 525 (599)
Q Consensus 459 ~~~F~~~d~~~~g~l~~~e~~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~ 525 (599)
+.+|..+|++++|.|+..++..+++.+|. +...+..++..+|.+++|.|+|++|+.++..
T Consensus 2 ~~~F~~~D~~~~G~i~~~el~~~l~~~g~-------~~~~~~~i~~~~d~~~~g~i~~~ef~~~~~~ 61 (67)
T cd00052 2 DQIFRSLDPDGDGLISGDEARPFLGKSGL-------PRSVLAQIWDLADTDKDGKLDKEEFAIAMHL 61 (67)
T ss_pred hHHHHHhCCCCCCcCcHHHHHHHHHHcCC-------CHHHHHHHHHHhcCCCCCcCCHHHHHHHHHH
Confidence 56899999999999999999999998874 4677999999999999999999999998864
No 49
>PF08726 EFhand_Ca_insen: Ca2+ insensitive EF hand; InterPro: IPR014837 EF hands are helix-loop-helix binding motifs involved in the regulation of many cellular processes. EF hands usually bind to Ca2+ ions, which cause a major conformational change that allows the protein to interact with its designated targets. This protein corresponds to an EF hand which has partially or entirely lost its calcium-binding properties. The calcium insensitive EF hand is still able to mediate protein-protein recognition []. ; PDB: 1H8B_A 1SJJ_B.
Probab=98.53 E-value=3.4e-08 Score=71.90 Aligned_cols=65 Identities=65% Similarity=1.248 Sum_probs=52.8
Q ss_pred CCHHHHHHHHHhhhCCCCCcCHHHHhccCCcchHHHHHHhcCCCCCCC--CCCCCccHHHHHHHhhc
Q psy12562 531 DTAEQVIDSFRILAGDKPYILPDELRRELPPDQAEYCIQRMPPYKGPN--AIPGALDYQSFSTALYG 595 (599)
Q Consensus 531 ~~~~~~~~~F~~~D~d~G~it~~el~~~l~~~~~~~~~~~~~~~~d~~--~~dg~i~~~eF~~~~~~ 595 (599)
.+.+++..+|+.+..+.+|||..+|++.|+|+++++|+..|....+++ +.-|.++|..|++.||+
T Consensus 3 ~s~eqv~~aFr~lA~~KpyVT~~dLr~~l~pe~aey~~~~Mp~~~~~~~~~~~~~~DY~~f~~~l~g 69 (69)
T PF08726_consen 3 DSAEQVEEAFRALAGGKPYVTEEDLRRSLTPEQAEYCISRMPPYEGPDGDAIPGAYDYESFTNSLFG 69 (69)
T ss_dssp STCHHHHHHHHHHCTSSSCEEHHHHHHHS-CCCHHHHHCCSEC--SSS----TTEEECHHHHCCCT-
T ss_pred CCHHHHHHHHHHHHcCCCcccHHHHHHHcCcHHHHHHHHHCcccCCCCcCCCCCCcCHHHHHHHHhC
Confidence 467999999999965599999999999999999999999999887655 23478999999998874
No 50
>cd05022 S-100A13 S-100A13: S-100A13 domain found in proteins similar to S100A13. S100A13 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A13 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100A13 is involved in the cellular export of interleukin-1 (IL-1) and of fibroblast growth factor-1 (FGF-1), which plays an important role in angiogenesis and tissue regeneration. Export is based on the CuII-dependent formation of multiprotein complexes containing the S100A13 protein. Assembly of these complexes occurs near the inner surface of the plasma membrane. Binding of two Ca(II) ions per monomer triggers key conformational changes leading to the creation of two identical and symmetrical Cu(II)-binding sites on the surface of the protein, close to the interface between the two monomers. These Cu
Probab=98.51 E-value=1.5e-07 Score=73.56 Aligned_cols=61 Identities=13% Similarity=0.168 Sum_probs=45.6
Q ss_pred HHHHHHHHhhhC-C-CCCcCHHHHhccCCc---c-hHH-HHHHhcCCCCCCCCCCCCccHHHHHHHhhc
Q psy12562 534 EQVIDSFRILAG-D-KPYILPDELRRELPP---D-QAE-YCIQRMPPYKGPNAIPGALDYQSFSTALYG 595 (599)
Q Consensus 534 ~~~~~~F~~~D~-d-~G~it~~el~~~l~~---~-~~~-~~~~~~~~~~d~~~~dg~i~~~eF~~~~~~ 595 (599)
..+..+|+.||+ + +|+|+..||+.+|+. . ..+ .-+..|+...|.|+ ||.|+|+||+..|.+
T Consensus 8 ~~l~~~F~~fd~~~~~g~i~~~ELk~ll~~elg~~ls~~~~v~~mi~~~D~d~-DG~I~F~EF~~l~~~ 75 (89)
T cd05022 8 ETLVSNFHKASVKGGKESLTASEFQELLTQQLPHLLKDVEGLEEKMKNLDVNQ-DSKLSFEEFWELIGE 75 (89)
T ss_pred HHHHHHHHHHhCCCCCCeECHHHHHHHHHHHhhhhccCHHHHHHHHHHhCCCC-CCCCcHHHHHHHHHH
Confidence 568889999999 7 999999999988732 1 111 33455556668888 999999999988754
No 51
>cd00051 EFh EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers.
Probab=98.46 E-value=8e-07 Score=64.98 Aligned_cols=61 Identities=33% Similarity=0.686 Sum_probs=56.8
Q ss_pred HHHHHHhhcCCCCCCcCHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhCCCCCCccchHHHHHHH
Q psy12562 458 FRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPNSTGYVHFDAFLDFM 523 (599)
Q Consensus 458 ~~~~F~~~d~~~~g~l~~~e~~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~ 523 (599)
+..+|..+|.+++|.|+.++|..++..++..+ +...+..+|..+|.+++|.|+|++|+.++
T Consensus 2 ~~~~f~~~d~~~~g~l~~~e~~~~l~~~~~~~-----~~~~~~~~~~~~~~~~~~~l~~~ef~~~~ 62 (63)
T cd00051 2 LREAFRLFDKDGDGTISADELKAALKSLGEGL-----SEEEIDEMIREVDKDGDGKIDFEEFLELM 62 (63)
T ss_pred HHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCC-----CHHHHHHHHHHhCCCCCCeEeHHHHHHHh
Confidence 56789999999999999999999999999888 88999999999999999999999998765
No 52
>cd05023 S-100A11 S-100A11: S-100A11 domain found in proteins similar to S100A11. S100A11 is a member of the S-100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A11 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100 proteins have also been associated with a variety of pathological events, including neoplastic transformation and neurodegenerative diseases such as Alzheimer's, usually via over expression of the protein. S100A11 is expressed in smooth muscle and other tissues and involves in calcium-dependent membrane aggregation, which is important for cell vesiculation . As is the case for many other S100 proteins, S
Probab=98.45 E-value=1e-06 Score=69.22 Aligned_cols=68 Identities=22% Similarity=0.304 Sum_probs=57.0
Q ss_pred HHHHHHHHHHh-hcCCCCC-CcCHHHHHHHHHHcC-----CCCCCCCCCHHHHHHHHHHhCCCCCCccchHHHHHHHhhh
Q psy12562 454 QLNEFRASFNH-FDKNRTG-RLAPEEFKSCLVSLG-----YSIGKDRQGEIDFQRILAVVDPNSTGYVHFDAFLDFMTRE 526 (599)
Q Consensus 454 ~~~~~~~~F~~-~d~~~~g-~l~~~e~~~~l~~~g-----~~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~ 526 (599)
.+..+..+|.. +|.+++| +|+.+||+.++.... ... +..++..+++.+|.|++|.|+|+||+.++...
T Consensus 7 ~i~~l~~~F~~y~~~dg~~~~Ls~~Elk~ll~~e~~~~~~~~~-----~~~~~~~ll~~~D~d~DG~I~f~EF~~l~~~l 81 (89)
T cd05023 7 CIESLIAVFQKYAGKDGDSYQLSKTEFLSFMNTELASFTKNQK-----DPGVLDRMMKKLDLNSDGQLDFQEFLNLIGGL 81 (89)
T ss_pred HHHHHHHHHHHHhccCCCcCeECHHHHHHHHHHhhhHhhcCCC-----CHHHHHHHHHHcCCCCCCcCcHHHHHHHHHHH
Confidence 34778999999 7788876 999999999997652 233 56789999999999999999999999988653
No 53
>KOG0028|consensus
Probab=98.43 E-value=1.8e-06 Score=72.56 Aligned_cols=99 Identities=16% Similarity=0.271 Sum_probs=85.7
Q ss_pred HHHHHHHHhhcCCCCCCcCHHHHHHHHH-HcCCCCCCCCCCHHHHHHHHHHhCCCCCCccchHHHHHHHhhhcCCCCCHH
Q psy12562 456 NEFRASFNHFDKNRTGRLAPEEFKSCLV-SLGYSIGKDRQGEIDFQRILAVVDPNSTGYVHFDAFLDFMTRESTDTDTAE 534 (599)
Q Consensus 456 ~~~~~~F~~~d~~~~g~l~~~e~~~~l~-~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~ 534 (599)
+++..+..-+|++++|.|++++|...+. .+|..- +..++...|+.+|.+++|.|++.+|+.++.. +....+.+
T Consensus 69 ~ei~kll~d~dk~~~g~i~fe~f~~~mt~k~~e~d-----t~eEi~~afrl~D~D~~Gkis~~~lkrvake-LgenltD~ 142 (172)
T KOG0028|consen 69 EEILKLLADVDKEGSGKITFEDFRRVMTVKLGERD-----TKEEIKKAFRLFDDDKTGKISQRNLKRVAKE-LGENLTDE 142 (172)
T ss_pred HHHHHHHHhhhhccCceechHHHHHHHHHHHhccC-----cHHHHHHHHHcccccCCCCcCHHHHHHHHHH-hCccccHH
Confidence 5567788889999999999999999874 556665 7899999999999999999999999998876 45556678
Q ss_pred HHHHHHHhhhCC-CCCcCHHHHhccCC
Q psy12562 535 QVIDSFRILAGD-KPYILPDELRRELP 560 (599)
Q Consensus 535 ~~~~~F~~~D~d-~G~it~~el~~~l~ 560 (599)
++...-.-+|.+ +|-|+.+||..+++
T Consensus 143 El~eMIeEAd~d~dgevneeEF~~imk 169 (172)
T KOG0028|consen 143 ELMEMIEEADRDGDGEVNEEEFIRIMK 169 (172)
T ss_pred HHHHHHHHhcccccccccHHHHHHHHh
Confidence 999999999999 99999999987763
No 54
>cd00252 SPARC_EC SPARC_EC; extracellular Ca2+ binding domain (containing 2 EF-hand motifs) of SPARC and related proteins (QR1, SC1/hevin, testican and tsc-36/FRP). SPARC (BM-40) is a multifunctional glycoprotein, a matricellular protein, that functions to regulate cell-matrix interactions; binds to such proteins as collagen and vitronectin and binds to endothelial cells thus inhibiting cellular proliferation. The EC domain interacts with a follistatin-like (FS) domain which appears to stabilize Ca2+ binding. The two EF-hands interact canonically but their conserved disulfide bonds confer a tight association between the EF-hand pair and an acid/amphiphilic N-terminal helix. Proposed active form involves a Ca2+ dependent symmetric homodimerization of EC-FS modules.
Probab=98.38 E-value=1.5e-06 Score=71.58 Aligned_cols=66 Identities=17% Similarity=0.225 Sum_probs=57.3
Q ss_pred CHHHHHHHHHHHHhhcCCCCCCcCHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhCCCCCCccchHHHHHHHhh
Q psy12562 451 TQEQLNEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPNSTGYVHFDAFLDFMTR 525 (599)
Q Consensus 451 ~~~~~~~~~~~F~~~d~~~~g~l~~~e~~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~ 525 (599)
.+.....+.-.|..+|.|++|.|+.+|+..+. ..+ .+..+..+|..+|.|++|.||++||+.++..
T Consensus 43 ~~~~~~~l~w~F~~lD~d~DG~Ls~~EL~~~~----l~~-----~e~~~~~f~~~~D~n~Dg~IS~~Ef~~cl~~ 108 (116)
T cd00252 43 YPMCKDPVGWMFNQLDGNYDGKLSHHELAPIR----LDP-----NEHCIKPFFESCDLDKDGSISLDEWCYCFIK 108 (116)
T ss_pred hHHHHHHHHHHHHHHCCCCCCcCCHHHHHHHH----ccc-----hHHHHHHHHHHHCCCCCCCCCHHHHHHHHhC
Confidence 45667889999999999999999999999876 334 5677888999999999999999999999843
No 55
>KOG4251|consensus
Probab=98.37 E-value=4.1e-07 Score=81.40 Aligned_cols=139 Identities=13% Similarity=0.222 Sum_probs=97.1
Q ss_pred HHHHHHHHHhhcCCCCCCcCHHHHHHHHHH-cCCCCCCCCCCHHHHHHHHHHhCCCCCCccchHHHHHHHhhhcC-----
Q psy12562 455 LNEFRASFNHFDKNRTGRLAPEEFKSCLVS-LGYSIGKDRQGEIDFQRILAVVDPNSTGYVHFDAFLDFMTREST----- 528 (599)
Q Consensus 455 ~~~~~~~F~~~d~~~~g~l~~~e~~~~l~~-~g~~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~----- 528 (599)
.+.+..+|...|.|.+|+|+..+++.+++. +...+ +++.++....|+.+|+||+|.|+++||..-+..-..
T Consensus 100 rrklmviFsKvDVNtDrkisAkEmqrwImektaEHf---qeameeSkthFraVDpdgDGhvsWdEykvkFlaskghseke 176 (362)
T KOG4251|consen 100 RRKLMVIFSKVDVNTDRKISAKEMQRWIMEKTAEHF---QEAMEESKTHFRAVDPDGDGHVSWDEYKVKFLASKGHSEKE 176 (362)
T ss_pred HHHHHHHHhhcccCccccccHHHHHHHHHHHHHHHH---HHHHhhhhhheeeeCCCCCCceehhhhhhHHHhhcCcchHH
Confidence 467899999999999999999999988853 32222 113344556789999999999999999765433111
Q ss_pred --------CCCCH-HH-------HHHHHHhhhCC--CCCcCHHHHhccCCcc----hHHHHHHhcCCCCCCCCCCCCccH
Q psy12562 529 --------DTDTA-EQ-------VIDSFRILAGD--KPYILPDELRRELPPD----QAEYCIQRMPPYKGPNAIPGALDY 586 (599)
Q Consensus 529 --------~~~~~-~~-------~~~~F~~~D~d--~G~it~~el~~~l~~~----~~~~~~~~~~~~~d~~~~dg~i~~ 586 (599)
.+... ++ ++.-+-..|.- +-.+|..||..+|.|+ .+-++++.++...|.|| |.+++-
T Consensus 177 vadairlneelkVDeEtqevlenlkdRwyqaDsppadlllteeEflsFLHPEhSrgmLrfmVkeivrdlDqdg-DkqlSv 255 (362)
T KOG4251|consen 177 VADAIRLNEELKVDEETQEVLENLKDRWYQADSPPADLLLTEEEFLSFLHPEHSRGMLRFMVKEIVRDLDQDG-DKQLSV 255 (362)
T ss_pred HHHHhhccCcccccHHHHHHHHhhhhhhccccCchhhhhhhHHHHHHHcChHhhhhhHHHHHHHHHHHhccCC-Ceeecc
Confidence 11000 11 22222233332 4457779999999764 56777888888888888 999999
Q ss_pred HHHHHHhhcCC
Q psy12562 587 QSFSTALYGES 597 (599)
Q Consensus 587 ~eF~~~~~~~~ 597 (599)
.+|++...+..
T Consensus 256 peFislpvGTV 266 (362)
T KOG4251|consen 256 PEFISLPVGTV 266 (362)
T ss_pred hhhhcCCCcch
Confidence 99999887753
No 56
>KOG0035|consensus
Probab=98.35 E-value=2.2e-06 Score=92.17 Aligned_cols=322 Identities=16% Similarity=0.237 Sum_probs=194.0
Q ss_pred HHHHHHHHHHHHHHhhhhhHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhHHh---------hHHHHHHHHHHHH-HH-h
Q psy12562 101 HLAQKFKHKADIHEDWTRGKEEMLQSSDFRQCKLNELKALKKKHEAFESDLAA---------HQDRVEQIAAIAQ-EL-N 169 (599)
Q Consensus 101 ~l~~~f~~~~~~~~~Wl~~~e~~l~~~~~~~~~l~~v~~~l~~h~~~~~el~~---------~~~~v~~l~~~~~-~L-~ 169 (599)
...+.|...+.....|+....+.+.....+ ......+. +..-++..+-. ....+.......+ .+ .
T Consensus 272 ~~~e~~e~~~s~~l~~~~~~~P~l~~r~~~-~~~~~~q~---~l~~~rd~~~r~~~~e~~v~~~~~~~~~~st~q~k~~~ 347 (890)
T KOG0035|consen 272 TTMEEYETLASELLEWIARRTPWLQNRVTD-SVGAKAQR---KLEFSRDAVYRRLEKEPLVEDKGRLESGFSTLQTKLRL 347 (890)
T ss_pred chHHHHHHHhhhhhhHHHhcCccccccccc-chhhhhcc---ccccccccccccccccccccccccccccchhhhhhhhh
Confidence 345678888899999999999999886554 22222211 22233321110 0001111111111 11 1
Q ss_pred hccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhHHHhhHHHHhhc-H
Q psy12562 170 TLEYHDSVSVNARCQRICDQWDHLGALTQQRRHALDEAEKILEKIDILHLEFAKRAAPFNNWLDGTREDLVDMFIVHT-M 248 (599)
Q Consensus 170 ~~~~~~~~~i~~~~~~l~~rw~~L~~~~~~R~~~L~~~~~~~q~~~~~~~~f~~~~~~l~~Wl~~~~~~l~~~~~~~~-~ 248 (599)
....+..+.=.......+..|..+...-.--...|-.........+.+...|...+..-..|....+..+...+++.+ +
T Consensus 348 ~~~p~~~~s~~~~~S~~~~~~~~le~~~~~~e~~ll~~~~~l~~~~~~~~~f~~~~s~~~~~~pg~e~~l~~~d~~~~ll 427 (890)
T KOG0035|consen 348 ESRPAKLASSGVLVSDINDAWQGLEQAEKLYEESLLAEIRRLERLEHLASKFSQKASLHESWTPGKEQVLFLNDYGQALL 427 (890)
T ss_pred hcccccCcccccccccccccccchhhhcccccccchhhhHHHhhhhhhhhhccccCchhhhhccchhhhhhhcchHHHHH
Confidence 111111111122233333444444333333333333333333444444555999999999999999999999888776 4
Q ss_pred HHHHHHHHHhHHHHhhHHHHHHHHhHHHHHHHHHHHHHHhhcCCCCCCCCCCCCChHHHHHHHHHHHHhhHhHhHHHHHH
Q psy12562 249 EEIQGLIDAHSQFKATLGEADKEYNSIVNLVREVESTVQQYQIPGGLENPYTALTANDLTKKWTDVRKLVPQRDTTLQAE 328 (599)
Q Consensus 249 ~~v~~ll~~h~~l~~el~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~w~~L~~~~~~R~~~L~~~ 328 (599)
..++++.++|++|+.++..+...+..+.+++..+..+.. .+.......++.+.+.|..+-.++..|+-.|...
T Consensus 428 e~~ke~~~~~ea~~~~~~~~~~~~e~~~ai~~~~~~~~~-------~~~~~~a~~~q~i~dq~~~~~~ls~~r~pal~~~ 500 (890)
T KOG0035|consen 428 EECKELTKKHEAFESDLSAHQDNVEAFCAIAHELNELLY-------DDAKLVAADCQHICDQWDDLGQLSRKRRPALMQM 500 (890)
T ss_pred HHHHhhcccccccccchhhhhcchhHHHHHHHHhhhhhh-------hhhhhhhhhhhhccccccccchhhhhhchhhhhh
Confidence 789999999999999999999888888888888765444 2566677789999999999999999999999998
Q ss_pred HHhhcchHHHHHHHHHHhchhhhhHHHHHHHHhhhhccC-CCCHHHHHHHHHHHHhhhh---ccccchHHHHHHHHHHhh
Q psy12562 329 LRKQQNNETLRRQFAEKANQVGPWIERQMDAVTSIGMGL-QGSLEDQLHRLKEYEQGVY---AYKPHIEELEKIHQAVQE 404 (599)
Q Consensus 329 l~~~~~~~~l~~~f~~~~~~~~~Wl~e~~~~l~~~~~~~-~~~~e~~~~~~~~~~~ei~---~~~~~~~~l~~~~~~l~~ 404 (599)
..-....+.+...|+..+.-+..|+.-....+.+..... .+..+.+...+..+..-+. .+...+-....-++....
T Consensus 501 ~~~~dk~~~~~le~a~Raa~~~~~l~~~~~d~~d~~~~~~ire~~~~~~a~~~~k~t~p~a~~~~~~~~~e~~e~~~~~~ 580 (890)
T KOG0035|consen 501 EKVLDKLAVLTLEFAKRAAPFNNWLKGVQEDLQDNEISYSIREIQRLRAADLQFKSTLPEADGEGQKISDEEKEREKVSE 580 (890)
T ss_pred hhhhHHHHHHHHHHHHHhhhhhhhhhhhhhhcccchhccchHhhhccchhhhhhcccCccccchhhhhhhhhhHHHHhhh
Confidence 887778888889999999999999987554444322111 2444444444444433332 222333222222222222
Q ss_pred c----cc-ccCCCccccHHHHHHHHHHHHHHHHHHHH
Q psy12562 405 G----MI-FENRYTQYTMETLRVGWEQLLTSINRNIN 436 (599)
Q Consensus 405 ~----~~-~~~~~~~~~~~~l~~~w~~l~~~~~~r~~ 436 (599)
. .. ..+|++..+ +...|+.+......+..
T Consensus 581 ~~~~~~~~~~np~~~~s---~~~~~d~v~~~~~~~~~ 614 (890)
T KOG0035|consen 581 QLNPKIEPDTNPYTTLS---IYGKWDAVLSSVPDRDS 614 (890)
T ss_pred hcCcccccccccccccc---cccchhhhcccccccch
Confidence 1 12 345566655 66778888776655444
No 57
>KOG0034|consensus
Probab=98.33 E-value=3.9e-06 Score=75.28 Aligned_cols=97 Identities=18% Similarity=0.241 Sum_probs=77.4
Q ss_pred HHHHHhhcCCCCCC-cCHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhCCCCCCccchHHHHHHHhhhcCCCCC--HH-
Q psy12562 459 RASFNHFDKNRTGR-LAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPNSTGYVHFDAFLDFMTRESTDTDT--AE- 534 (599)
Q Consensus 459 ~~~F~~~d~~~~g~-l~~~e~~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~--~~- 534 (599)
..+|+.|+.+++|. |++.+|...+......- ....-++-.|+.||.+++|.|+.+++..++........+ .+
T Consensus 69 ~rI~~~f~~~~~~~~v~F~~Fv~~ls~f~~~~----~~~~Kl~faF~vYD~~~~G~I~reel~~iv~~~~~~~~~~~~e~ 144 (187)
T KOG0034|consen 69 DRIIDRFDTDGNGDPVDFEEFVRLLSVFSPKA----SKREKLRFAFRVYDLDGDGFISREELKQILRMMVGENDDMSDEQ 144 (187)
T ss_pred HHHHHHHhccCCCCccCHHHHHHHHhhhcCCc----cHHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHHHccCCcchHHH
Confidence 57888899988888 99999999886543222 034477789999999999999999999998876554333 32
Q ss_pred ---HHHHHHHhhhCC-CCCcCHHHHhccC
Q psy12562 535 ---QVIDSFRILAGD-KPYILPDELRREL 559 (599)
Q Consensus 535 ---~~~~~F~~~D~d-~G~it~~el~~~l 559 (599)
-+...|..+|.| +|+|+.+||..++
T Consensus 145 ~~~i~d~t~~e~D~d~DG~IsfeEf~~~v 173 (187)
T KOG0034|consen 145 LEDIVDKTFEEADTDGDGKISFEEFCKVV 173 (187)
T ss_pred HHHHHHHHHHHhCCCCCCcCcHHHHHHHH
Confidence 355689999999 9999999999987
No 58
>cd00252 SPARC_EC SPARC_EC; extracellular Ca2+ binding domain (containing 2 EF-hand motifs) of SPARC and related proteins (QR1, SC1/hevin, testican and tsc-36/FRP). SPARC (BM-40) is a multifunctional glycoprotein, a matricellular protein, that functions to regulate cell-matrix interactions; binds to such proteins as collagen and vitronectin and binds to endothelial cells thus inhibiting cellular proliferation. The EC domain interacts with a follistatin-like (FS) domain which appears to stabilize Ca2+ binding. The two EF-hands interact canonically but their conserved disulfide bonds confer a tight association between the EF-hand pair and an acid/amphiphilic N-terminal helix. Proposed active form involves a Ca2+ dependent symmetric homodimerization of EC-FS modules.
Probab=98.25 E-value=1.1e-06 Score=72.48 Aligned_cols=61 Identities=20% Similarity=0.219 Sum_probs=42.2
Q ss_pred HHHHHHHHhhhCC-CCCcCHHHHhccCCcchHHHHHHhcCCCCCCCCCCCCccHHHHHHHhhcC
Q psy12562 534 EQVIDSFRILAGD-KPYILPDELRRELPPDQAEYCIQRMPPYKGPNAIPGALDYQSFSTALYGE 596 (599)
Q Consensus 534 ~~~~~~F~~~D~d-~G~it~~el~~~l~~~~~~~~~~~~~~~~d~~~~dg~i~~~eF~~~~~~~ 596 (599)
..+..+|..+|.| +|+||.+||..+. -...+.++..++...|.|+ ||.||++||..++...
T Consensus 48 ~~l~w~F~~lD~d~DG~Ls~~EL~~~~-l~~~e~~~~~f~~~~D~n~-Dg~IS~~Ef~~cl~~~ 109 (116)
T cd00252 48 DPVGWMFNQLDGNYDGKLSHHELAPIR-LDPNEHCIKPFFESCDLDK-DGSISLDEWCYCFIKE 109 (116)
T ss_pred HHHHHHHHHHCCCCCCcCCHHHHHHHH-ccchHHHHHHHHHHHCCCC-CCCCCHHHHHHHHhCh
Confidence 5678888888888 8888888888763 1112333444555557777 8888888888888544
No 59
>cd05030 calgranulins Calgranulins: S-100 domain found in proteins belonging to the Calgranulin subgroup of the S100 family of EF-hand calcium-modulated proteins, including S100A8, S100A9, and S100A12 . Note that the S-100 hierarchy, to which this Calgranulin group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. These proteins are expressed mainly in granulocytes, and are involved in inflammation, allergy, and neuritogenesis, as well as in host-parasite response. Calgranulins are modulated not only by calcium, but also by other metals such as zinc and copper. Structural data suggested that calgranulins may exist in multiple structural forms, homodimers, as well as hetero-oligomers. For example, the S100A8/S100A9 complex called calprotectin plays important roles in the regulation of inflammatory processes, wound repair, and regulating zinc-dependent enzymes as well as microbial growth.
Probab=98.23 E-value=5e-06 Score=65.42 Aligned_cols=71 Identities=18% Similarity=0.370 Sum_probs=57.6
Q ss_pred HHHHHHHHHhhcCC--CCCCcCHHHHHHHHH-HcCCCCCCCCCCHHHHHHHHHHhCCCCCCccchHHHHHHHhhh
Q psy12562 455 LNEFRASFNHFDKN--RTGRLAPEEFKSCLV-SLGYSIGKDRQGEIDFQRILAVVDPNSTGYVHFDAFLDFMTRE 526 (599)
Q Consensus 455 ~~~~~~~F~~~d~~--~~g~l~~~e~~~~l~-~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~ 526 (599)
+..+...|..|+.. ++|+|+..+|+.+|. .+|..+. ...+...+..+|..+|.+++|.|+|++|+.++...
T Consensus 7 i~~~~~~f~~y~~~~~~~~~Is~~El~~ll~~~~g~~~t-~~~~~~~v~~i~~~~D~d~dG~I~f~eF~~~~~~~ 80 (88)
T cd05030 7 IETIINVFHQYSVRKGHPDTLYKKEFKQLVEKELPNFLK-KEKNQKAIDKIFEDLDTNQDGQLSFEEFLVLVIKV 80 (88)
T ss_pred HHHHHHHHHHHhccCCCcccCCHHHHHHHHHHHhhHhhc-cCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHHHH
Confidence 36678999999866 479999999999996 5565550 00128899999999999999999999999988753
No 60
>cd05027 S-100B S-100B: S-100B domain found in proteins similar to S100B. S100B is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100B group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100B is most abundant in glial cells of the central nervous system, predominately in astrocytes. S100B is involved in signal transduction via the inhibition of protein phoshorylation, regulation of enzyme activity and by affecting the calcium homeostasis. Upon calcium binding the S100B homodimer changes conformation to expose a hydrophobic cleft, which represents the interaction site of S100B with its more than 20 known target proteins. These target proteins include several cellular architecture proteins such as tubulin and GFAP; S100B can inhibit polymerization of these oligomeric molecules. Furthermore, S100B i
Probab=98.21 E-value=1.8e-06 Score=67.68 Aligned_cols=56 Identities=16% Similarity=0.308 Sum_probs=36.1
Q ss_pred HHHHHHHHhhh-CC-CC-CcCHHHHhccCC------------cchHHHHHHhcCCCCCCCCCCCCccHHHHHHHhh
Q psy12562 534 EQVIDSFRILA-GD-KP-YILPDELRRELP------------PDQAEYCIQRMPPYKGPNAIPGALDYQSFSTALY 594 (599)
Q Consensus 534 ~~~~~~F~~~D-~d-~G-~it~~el~~~l~------------~~~~~~~~~~~~~~~d~~~~dg~i~~~eF~~~~~ 594 (599)
..+..+|+.|| ++ +| +|+.+||+.+|. +++++.++.. .|.|+ ||.|+|++|+..+.
T Consensus 8 ~~l~~aF~~fD~~dgdG~~I~~~eL~~ll~~~~~~~lg~~~~~~~v~~~i~~----~D~n~-dG~v~f~eF~~li~ 78 (88)
T cd05027 8 VALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMET----LDSDG-DGECDFQEFMAFVA 78 (88)
T ss_pred HHHHHHHHHhcccCCCcCEECHHHHHHHHHHHhHHHhcCCCCHHHHHHHHHH----hCCCC-CCcCcHHHHHHHHH
Confidence 45677777776 56 77 477777777652 2334444443 37777 78888888877664
No 61
>KOG0041|consensus
Probab=98.21 E-value=6.3e-06 Score=71.81 Aligned_cols=104 Identities=15% Similarity=0.306 Sum_probs=81.0
Q ss_pred CCCHHHHHHHHHHHHhhcCCCCCCcCHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhCCCCCCccchHHHHHHHhhhcC
Q psy12562 449 GITQEQLNEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPNSTGYVHFDAFLDFMTREST 528 (599)
Q Consensus 449 ~~~~~~~~~~~~~F~~~d~~~~g~l~~~e~~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~ 528 (599)
.++..++..+..+|..||.+.||+|+..|++.+|..+|.+- +.--+..|+..+|.|.+|+|+|.+|+-++.....
T Consensus 92 eFsrkqIk~~~~~Fk~yDe~rDgfIdl~ELK~mmEKLgapQ-----THL~lK~mikeVded~dgklSfreflLIfrkaaa 166 (244)
T KOG0041|consen 92 EFSRKQIKDAESMFKQYDEDRDGFIDLMELKRMMEKLGAPQ-----THLGLKNMIKEVDEDFDGKLSFREFLLIFRKAAA 166 (244)
T ss_pred HHHHHHHHHHHHHHHHhcccccccccHHHHHHHHHHhCCch-----hhHHHHHHHHHhhcccccchhHHHHHHHHHHHhc
Confidence 34566778889999999999999999999999999999987 7888899999999999999999999999876544
Q ss_pred CCCCHH-HHHHHHHh--hhCC-CCCcCHHHHhc
Q psy12562 529 DTDTAE-QVIDSFRI--LAGD-KPYILPDELRR 557 (599)
Q Consensus 529 ~~~~~~-~~~~~F~~--~D~d-~G~it~~el~~ 557 (599)
+....+ .+...=+. .|.. .|.....-|-.
T Consensus 167 gEL~~ds~~~~LAr~~eVDVskeGV~GAknFFe 199 (244)
T KOG0041|consen 167 GELQEDSGLLRLARLSEVDVSKEGVSGAKNFFE 199 (244)
T ss_pred cccccchHHHHHHHhcccchhhhhhhhHHHHHH
Confidence 433322 22222222 5666 67666666644
No 62
>cd05026 S-100Z S-100Z: S-100Z domain found in proteins similar to S100Z. S100Z is a member of the S100 domain family within the EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100Z group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately.S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control. S100Z is normally expressed in various tissues, with its highest level of expression being in spleen and leukocytes. The function of S100Z remains unclear. Preliminary structural data suggests that S100Z is homodimer, however a heterodimer with S100P has been reported. S100Z is capable of binding calcium ions. When calcium binds to S110Z, the protein experiences a conformational change, which exposes hydrophobic surfac
Probab=98.20 E-value=1.3e-06 Score=69.56 Aligned_cols=60 Identities=13% Similarity=0.245 Sum_probs=34.8
Q ss_pred HHHHHHHHhhh-CC-CC-CcCHHHHhccCCc--------chHHHHHHhcCCCCCCCCCCCCccHHHHHHHhh
Q psy12562 534 EQVIDSFRILA-GD-KP-YILPDELRRELPP--------DQAEYCIQRMPPYKGPNAIPGALDYQSFSTALY 594 (599)
Q Consensus 534 ~~~~~~F~~~D-~d-~G-~it~~el~~~l~~--------~~~~~~~~~~~~~~d~~~~dg~i~~~eF~~~~~ 594 (599)
..+..+|+.|| .| +| +||..||+.++.. ...+..+..|+...|.|+ ||.|+|+||+..|.
T Consensus 10 ~~~~~~F~~~dd~dgdg~~Is~~EL~~ll~~~~~~~~~~~~~~~~v~~i~~elD~n~-dG~Idf~EF~~l~~ 80 (93)
T cd05026 10 DTLIRIFHNYSGKEGDRYKLSKGELKELLQRELTDFLSSQKDPMLVDKIMNDLDSNK-DNEVDFNEFVVLVA 80 (93)
T ss_pred HHHHHHHHHHHccCCCCCEECHHHHHHHHHHHhHHhcccccCHHHHHHHHHHhCCCC-CCCCCHHHHHHHHH
Confidence 35666677777 45 66 4777777776511 111122333333346676 77788888777664
No 63
>KOG0036|consensus
Probab=98.05 E-value=9.7e-05 Score=72.05 Aligned_cols=93 Identities=25% Similarity=0.361 Sum_probs=81.2
Q ss_pred HHHHHHHHhhcCCCCCCcCHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhCCCCCCccchHHHHHHHhhhcCCCCCHHH
Q psy12562 456 NEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPNSTGYVHFDAFLDFMTRESTDTDTAEQ 535 (599)
Q Consensus 456 ~~~~~~F~~~d~~~~g~l~~~e~~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~ 535 (599)
+-...+|..+|.|.+|.++.++|+..+.. .+..+-.+|..+|.+.||.|+..|.-..+.. +....+.++
T Consensus 51 ~~~~~l~~~~d~~~dg~vDy~eF~~Y~~~----------~E~~l~~~F~~iD~~hdG~i~~~Ei~~~l~~-~gi~l~de~ 119 (463)
T KOG0036|consen 51 EAAKMLFSAMDANRDGRVDYSEFKRYLDN----------KELELYRIFQSIDLEHDGKIDPNEIWRYLKD-LGIQLSDEK 119 (463)
T ss_pred HHHHHHHHhcccCcCCcccHHHHHHHHHH----------hHHHHHHHHhhhccccCCccCHHHHHHHHHH-hCCccCHHH
Confidence 55688999999999999999999999875 5667788999999999999999998888776 344566788
Q ss_pred HHHHHHhhhCC-CCCcCHHHHhccC
Q psy12562 536 VIDSFRILAGD-KPYILPDELRREL 559 (599)
Q Consensus 536 ~~~~F~~~D~d-~G~it~~el~~~l 559 (599)
+...|...|++ ++.|+.+|+++++
T Consensus 120 ~~k~~e~~d~~g~~~I~~~e~rd~~ 144 (463)
T KOG0036|consen 120 AAKFFEHMDKDGKATIDLEEWRDHL 144 (463)
T ss_pred HHHHHHHhccCCCeeeccHHHHhhh
Confidence 99999999999 9999999999976
No 64
>cd05025 S-100A1 S-100A1: S-100A1 domain found in proteins similar to S100A1. S100A1 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. As is the case with many other members of S100 protein family, S100A1 is implicated in intracellular and extracellular regulatory activities, including interaction with myosin-associated twitchin kinase, actin-capping protein CapZ, sinapsin I, and tubulin. Structural data suggests that S100A1 proteins exist within cells as antiparallel homodimers, while heterodimers with S100A4 and S100B also has been reported. Upon binding calcium S100A1 changes conformation to expose a hydrophobic cleft which is the interaction site of S100A1 with its more that 20 known target proteins.
Probab=98.04 E-value=6.7e-06 Score=65.54 Aligned_cols=25 Identities=24% Similarity=0.456 Sum_probs=12.0
Q ss_pred HHHHHHHhhh-CC-CCC-cCHHHHhccC
Q psy12562 535 QVIDSFRILA-GD-KPY-ILPDELRREL 559 (599)
Q Consensus 535 ~~~~~F~~~D-~d-~G~-it~~el~~~l 559 (599)
.++.+|..|| .+ +|+ |+..||+.+|
T Consensus 10 ~l~~~F~~fDd~dg~G~~Is~~El~~~l 37 (92)
T cd05025 10 TLINVFHAHSGKEGDKYKLSKKELKDLL 37 (92)
T ss_pred HHHHHHHHHhcccCCCCeECHHHHHHHH
Confidence 3444555553 44 552 5555554444
No 65
>KOG2562|consensus
Probab=98.04 E-value=1.9e-05 Score=78.07 Aligned_cols=132 Identities=20% Similarity=0.273 Sum_probs=98.4
Q ss_pred CHHHHHHHHHHHHhhcCCCCCCcCHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhC----CCCCCccchHHHHHHHhhh
Q psy12562 451 TQEQLNEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVD----PNSTGYVHFDAFLDFMTRE 526 (599)
Q Consensus 451 ~~~~~~~~~~~F~~~d~~~~g~l~~~e~~~~l~~~g~~~~~~~~~~~~~~~~~~~~d----~~~~g~I~~~eF~~~~~~~ 526 (599)
+-+.-..+...|-.+|+|++|.|+.++++..-.. .+ +...+++||..+- ...+|+++|++|+.++..
T Consensus 273 S~e~f~viy~kFweLD~Dhd~lidk~~L~ry~d~---tl-----t~~ivdRIFs~v~r~~~~~~eGrmdykdFv~FilA- 343 (493)
T KOG2562|consen 273 SYEHFYVIYCKFWELDTDHDGLIDKEDLKRYGDH---TL-----TERIVDRIFSQVPRGFTVKVEGRMDYKDFVDFILA- 343 (493)
T ss_pred eHHHHHHHHHHHhhhccccccccCHHHHHHHhcc---ch-----hhHHHHHHHhhccccceeeecCcccHHHHHHHHHH-
Confidence 4444455566689999999999999999876322 23 6678899998332 346799999999999987
Q ss_pred cCCCCCHHHHHHHHHhhhCC-CCCcCHHHHhccC----------C--cchHHHHHHhcCCCCCCCCCCCCccHHHHHHH
Q psy12562 527 STDTDTAEQVIDSFRILAGD-KPYILPDELRREL----------P--PDQAEYCIQRMPPYKGPNAIPGALDYQSFSTA 592 (599)
Q Consensus 527 ~~~~~~~~~~~~~F~~~D~d-~G~it~~el~~~l----------~--~~~~~~~~~~~~~~~d~~~~dg~i~~~eF~~~ 592 (599)
..+..+...+.-.|+.+|-+ +|+||..|++-+. . +--++.+++.|.+...+.. .|.|+..+|..+
T Consensus 344 ~e~k~t~~SleYwFrclDld~~G~Lt~~el~~fyeeq~~rm~~~~~e~l~fed~l~qi~DMvkP~~-~~kItLqDlk~s 421 (493)
T KOG2562|consen 344 EEDKDTPASLEYWFRCLDLDGDGILTLNELRYFYEEQLQRMECMGQEALPFEDALCQIRDMVKPED-ENKITLQDLKGS 421 (493)
T ss_pred hccCCCccchhhheeeeeccCCCcccHHHHHHHHHHHHHHHHhcCCCcccHHHHHHHHHHHhCccC-CCceeHHHHhhc
Confidence 34556667899999999999 9999999998764 1 2234555666655555554 789999999864
No 66
>cd05029 S-100A6 S-100A6: S-100A6 domain found in proteins similar to S100A6. S100A6 is a member of the S100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A6 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100A6 is normally expressed in the G1 phase of the cell cycle in neuronal cells. The function of S100A6 remains unclear, but evidence suggests that it is involved in cell cycle regulation and exocytosis. S100A6 may also be involved in tumorigenesis; the protein is overexpressed in several tumors. Ca2+ binding to S100A6 leads to a conformational change in the protein, which exposes a hydrophobic surface for interact
Probab=98.03 E-value=7.1e-06 Score=64.33 Aligned_cols=56 Identities=16% Similarity=0.233 Sum_probs=33.7
Q ss_pred HHHHHHHhhhCC---CCCcCHHHHhccCC----------cchHHHHHHhcCCCCCCCCCCCCccHHHHHHHhhc
Q psy12562 535 QVIDSFRILAGD---KPYILPDELRRELP----------PDQAEYCIQRMPPYKGPNAIPGALDYQSFSTALYG 595 (599)
Q Consensus 535 ~~~~~F~~~D~d---~G~it~~el~~~l~----------~~~~~~~~~~~~~~~d~~~~dg~i~~~eF~~~~~~ 595 (599)
.+..+|..||.+ +|+|+.+||+.+|+ +++++.++. ..|.|+ +|.|+|++|+..|.+
T Consensus 11 ~~i~~F~~y~~~~~~~g~Is~~EL~~~l~~~~~lg~k~t~~ev~~m~~----~~D~d~-dG~Idf~EFv~lm~~ 79 (88)
T cd05029 11 LLVAIFHKYSGREGDKNTLSKKELKELIQKELTIGSKLQDAEIAKLME----DLDRNK-DQEVNFQEYVTFLGA 79 (88)
T ss_pred HHHHHHHHHHccCCCCCEECHHHHHHHHHHHHhcCCCCCHHHHHHHHH----HhcCCC-CCCCcHHHHHHHHHH
Confidence 456667777652 45777777766652 233443333 336666 777777777776653
No 67
>KOG0031|consensus
Probab=97.98 E-value=0.00038 Score=58.42 Aligned_cols=135 Identities=16% Similarity=0.312 Sum_probs=93.8
Q ss_pred HHHHHHHHhhhhccCCCCHHHHHHHHHHHHhhhhccccchHHHHHHHHHHhhcccccCCCccccHHHHHHHHHHHHHHHH
Q psy12562 353 IERQMDAVTSIGMGLQGSLEDQLHRLKEYEQGVYAYKPHIEELEKIHQAVQEGMIFENRYTQYTMETLRVGWEQLLTSIN 432 (599)
Q Consensus 353 l~e~~~~l~~~~~~~~~~~e~~~~~~~~~~~ei~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~l~~~w~~l~~~~~ 432 (599)
|.+-.+.++-.+.+.++-+..- .++.+...+... ..-+.|..|... .++. ..+.-|+.++.
T Consensus 31 IqEfKEAF~~mDqnrDG~Idke--DL~d~~aSlGk~-~~d~elDaM~~E-------a~gP---------INft~FLTmfG 91 (171)
T KOG0031|consen 31 IQEFKEAFNLMDQNRDGFIDKE--DLRDMLASLGKI-ASDEELDAMMKE-------APGP---------INFTVFLTMFG 91 (171)
T ss_pred HHHHHHHHHHHhccCCCcccHH--HHHHHHHHcCCC-CCHHHHHHHHHh-------CCCC---------eeHHHHHHHHH
Confidence 4455555555555555444322 445555555443 444555444332 1111 12555666666
Q ss_pred HHHHHHHHHHHhhhccCCCHHHHHHHHHHHHhhcCCCCCCcCHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhCCCCCC
Q psy12562 433 RNINEVENQILTRDSKGITQEQLNEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPNSTG 512 (599)
Q Consensus 433 ~r~~~Le~~~~~~~~~~~~~~~~~~~~~~F~~~d~~~~g~l~~~e~~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g 512 (599)
.+.. +..+ .+.+...|..||.+++|.|..+.|+.+|..+|..+ +.++++.+|+.+-++..|
T Consensus 92 ekL~------------gtdp--e~~I~~AF~~FD~~~~G~I~~d~lre~Ltt~gDr~-----~~eEV~~m~r~~p~d~~G 152 (171)
T KOG0031|consen 92 EKLN------------GTDP--EEVILNAFKTFDDEGSGKIDEDYLRELLTTMGDRF-----TDEEVDEMYREAPIDKKG 152 (171)
T ss_pred HHhc------------CCCH--HHHHHHHHHhcCccCCCccCHHHHHHHHHHhcccC-----CHHHHHHHHHhCCcccCC
Confidence 5552 3333 37789999999999999999999999999999999 999999999999999999
Q ss_pred ccchHHHHHHHhh
Q psy12562 513 YVHFDAFLDFMTR 525 (599)
Q Consensus 513 ~I~~~eF~~~~~~ 525 (599)
.|+|..|+.++..
T Consensus 153 ~~dy~~~~~~ith 165 (171)
T KOG0031|consen 153 NFDYKAFTYIITH 165 (171)
T ss_pred ceeHHHHHHHHHc
Confidence 9999999999863
No 68
>cd05023 S-100A11 S-100A11: S-100A11 domain found in proteins similar to S100A11. S100A11 is a member of the S-100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A11 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100 proteins have also been associated with a variety of pathological events, including neoplastic transformation and neurodegenerative diseases such as Alzheimer's, usually via over expression of the protein. S100A11 is expressed in smooth muscle and other tissues and involves in calcium-dependent membrane aggregation, which is important for cell vesiculation . As is the case for many other S100 proteins, S
Probab=97.97 E-value=1.1e-05 Score=63.26 Aligned_cols=61 Identities=23% Similarity=0.317 Sum_probs=39.5
Q ss_pred HHHHHHHHh-hhCC-CC-CcCHHHHhccCCcc--------hHHHHHHhcCCCCCCCCCCCCccHHHHHHHhhc
Q psy12562 534 EQVIDSFRI-LAGD-KP-YILPDELRRELPPD--------QAEYCIQRMPPYKGPNAIPGALDYQSFSTALYG 595 (599)
Q Consensus 534 ~~~~~~F~~-~D~d-~G-~it~~el~~~l~~~--------~~~~~~~~~~~~~d~~~~dg~i~~~eF~~~~~~ 595 (599)
..+..+|+. +|.+ +| +||.+||..++..+ ..+..+..|+...|.|+ ||.|+|+||+..|..
T Consensus 9 ~~l~~~F~~y~~~dg~~~~Ls~~Elk~ll~~e~~~~~~~~~~~~~~~~ll~~~D~d~-DG~I~f~EF~~l~~~ 80 (89)
T cd05023 9 ESLIAVFQKYAGKDGDSYQLSKTEFLSFMNTELASFTKNQKDPGVLDRMMKKLDLNS-DGQLDFQEFLNLIGG 80 (89)
T ss_pred HHHHHHHHHHhccCCCcCeECHHHHHHHHHHhhhHhhcCCCCHHHHHHHHHHcCCCC-CCcCcHHHHHHHHHH
Confidence 467778888 4555 54 88888888877322 01122334444447787 899999999987753
No 69
>PF00036 EF-hand_1: EF hand; InterPro: IPR018248 Many calcium-binding proteins belong to the same evolutionary family and share a type of calcium-binding domain known as the EF-hand. This type of domain consists of a twelve residue loop flanked on both sides by a twelve residue alpha-helical domain. In an EF-hand loop the calcium ion is coordinated in a pentagonal bipyramidal configuration. The six residues involved in the binding are in positions 1, 3, 5, 7, 9 and 12; these residues are denoted by X, Y, Z, -Y, -X and -Z. The invariant Glu or Asp at position 12 provides two oxygens for liganding Ca (bidentate ligand).; PDB: 1BJF_A 1XFW_R 1XFV_O 2K0J_A 2F3Z_A 3BYA_A 1XFU_Q 2R28_B 1ZOT_B 3G43_D ....
Probab=97.90 E-value=1.5e-05 Score=47.57 Aligned_cols=28 Identities=18% Similarity=0.549 Sum_probs=24.3
Q ss_pred HHHHHHHHhCCCCCCccchHHHHHHHhh
Q psy12562 498 DFQRILAVVDPNSTGYVHFDAFLDFMTR 525 (599)
Q Consensus 498 ~~~~~~~~~d~~~~g~I~~~eF~~~~~~ 525 (599)
+++.+|+.+|.|+||.|+|+||+.++..
T Consensus 1 E~~~~F~~~D~d~dG~I~~~Ef~~~~~~ 28 (29)
T PF00036_consen 1 ELKEAFREFDKDGDGKIDFEEFKEMMKK 28 (29)
T ss_dssp HHHHHHHHHSTTSSSEEEHHHHHHHHHH
T ss_pred CHHHHHHHHCCCCCCcCCHHHHHHHHHh
Confidence 4678999999999999999999998764
No 70
>cd05031 S-100A10_like S-100A10_like: S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1_like group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=97.89 E-value=7.5e-06 Score=65.56 Aligned_cols=17 Identities=18% Similarity=0.544 Sum_probs=9.3
Q ss_pred CCCCCCCCccHHHHHHHh
Q psy12562 576 GPNAIPGALDYQSFSTAL 593 (599)
Q Consensus 576 d~~~~dg~i~~~eF~~~~ 593 (599)
|.++ +|.|+|.+|+..|
T Consensus 61 D~~~-dg~I~f~eF~~l~ 77 (94)
T cd05031 61 DQNR-DGKVNFEEFVSLV 77 (94)
T ss_pred CCCC-CCcCcHHHHHHHH
Confidence 4454 5555555555544
No 71
>cd00052 EH Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction. The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A hydrophobic binding pocket is formed by residues from both EF-hand motifs. The EH domain binds to proteins containing NPF (class I), [WF]W or SWG (class II), or H[TS]F (class III) sequence motifs.
Probab=97.85 E-value=2.2e-05 Score=58.36 Aligned_cols=54 Identities=15% Similarity=0.247 Sum_probs=28.5
Q ss_pred HHHHHhCCCCCCccchHHHHHHHhhhcCCCCCHHHHHHHHHhhhCC-CCCcCHHHHhc
Q psy12562 501 RILAVVDPNSTGYVHFDAFLDFMTRESTDTDTAEQVIDSFRILAGD-KPYILPDELRR 557 (599)
Q Consensus 501 ~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~~F~~~D~d-~G~it~~el~~ 557 (599)
.+|..+|++++|.|+.+||..++... ..+.+.+..+|..+|.+ +|.|+..||..
T Consensus 3 ~~F~~~D~~~~G~i~~~el~~~l~~~---g~~~~~~~~i~~~~d~~~~g~i~~~ef~~ 57 (67)
T cd00052 3 QIFRSLDPDGDGLISGDEARPFLGKS---GLPRSVLAQIWDLADTDKDGKLDKEEFAI 57 (67)
T ss_pred HHHHHhCCCCCCcCcHHHHHHHHHHc---CCCHHHHHHHHHHhcCCCCCcCCHHHHHH
Confidence 45555566666666666665555432 12344555555555555 55555555543
No 72
>KOG2643|consensus
Probab=97.83 E-value=7.9e-05 Score=73.16 Aligned_cols=131 Identities=15% Similarity=0.218 Sum_probs=94.8
Q ss_pred HHHHHHHHhhcCCCCCCcCHHHHHHHHHHc-CCCCCCCCCCHHHHHHHHHHhCCCCCCccchHHHHHHHhhhcCCCCCHH
Q psy12562 456 NEFRASFNHFDKNRTGRLAPEEFKSCLVSL-GYSIGKDRQGEIDFQRILAVVDPNSTGYVHFDAFLDFMTRESTDTDTAE 534 (599)
Q Consensus 456 ~~~~~~F~~~d~~~~g~l~~~e~~~~l~~~-g~~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~ 534 (599)
+.+.--|..+|+..+|.|+..+|..++-.. +.+... -.....++-+.++.++ -.|+++||..++.-. ..-+
T Consensus 318 Eil~lEF~~~~~~~~g~Ise~DFA~~lL~~a~~n~~~---k~~~lkrvk~kf~~~~-~gISl~Ef~~Ff~Fl----~~l~ 389 (489)
T KOG2643|consen 318 EILELEFERFDKGDSGAISEVDFAELLLAYAGVNSKK---KHKYLKRVKEKFKDDG-KGISLQEFKAFFRFL----NNLN 389 (489)
T ss_pred HHHHHHHHHhCcccccccCHHHHHHHHHHHcccchHh---HHHHHHHHHHhccCCC-CCcCHHHHHHHHHHH----hhhh
Confidence 455677999999999999999999988543 443300 1224456667777554 459999999987642 1235
Q ss_pred HHHHHHHhhhCCCCCcCHHHHhccCC----cchHHHHHHhcCCCCCCCCCCCCccHHHHHHHhhc
Q psy12562 535 QVIDSFRILAGDKPYILPDELRRELP----PDQAEYCIQRMPPYKGPNAIPGALDYQSFSTALYG 595 (599)
Q Consensus 535 ~~~~~F~~~D~d~G~it~~el~~~l~----~~~~~~~~~~~~~~~d~~~~dg~i~~~eF~~~~~~ 595 (599)
++..|...|-.-.+.|+..+|+++.. .+..+.+++-++..+|.|+ ||.++++||+..|-+
T Consensus 390 dfd~Al~fy~~Ag~~i~~~~f~raa~~vtGveLSdhVvdvvF~IFD~N~-Dg~LS~~EFl~Vmk~ 453 (489)
T KOG2643|consen 390 DFDIALRFYHMAGASIDEKTFQRAAKVVTGVELSDHVVDVVFTIFDENN-DGTLSHKEFLAVMKR 453 (489)
T ss_pred HHHHHHHHHHHcCCCCCHHHHHHHHHHhcCcccccceeeeEEEEEccCC-CCcccHHHHHHHHHH
Confidence 66677777765577899999999751 2344456667788889999 999999999998865
No 73
>cd05024 S-100A10 S-100A10: A subgroup of the S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A10 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=97.81 E-value=0.00017 Score=55.86 Aligned_cols=70 Identities=13% Similarity=0.345 Sum_probs=54.3
Q ss_pred HHHHHHHHHhhcCCCCCCcCHHHHHHHHHH-cCCCCCCCCCCHHHHHHHHHHhCCCCCCccchHHHHHHHhhh
Q psy12562 455 LNEFRASFNHFDKNRTGRLAPEEFKSCLVS-LGYSIGKDRQGEIDFQRILAVVDPNSTGYVHFDAFLDFMTRE 526 (599)
Q Consensus 455 ~~~~~~~F~~~d~~~~g~l~~~e~~~~l~~-~g~~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~ 526 (599)
+..+..+|..|. .++++|+..||+.++.. ++..++. .-+...++.+|...|.|+||.|+|.||+.++...
T Consensus 7 i~~lI~~FhkYa-G~~~tLsk~Elk~Ll~~Elp~~l~~-~~d~~~vd~im~~LD~n~Dg~vdF~EF~~Lv~~l 77 (91)
T cd05024 7 MEKMMLTFHKFA-GEKNYLNRDDLQKLMEKEFSEFLKN-QNDPMAVDKIMKDLDDCRDGKVGFQSFFSLIAGL 77 (91)
T ss_pred HHHHHHHHHHHc-CCCCcCCHHHHHHHHHHHhHHHHcC-CCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 366788999998 45679999999999953 3321211 1157789999999999999999999999998764
No 74
>KOG2643|consensus
Probab=97.74 E-value=8.8e-05 Score=72.82 Aligned_cols=131 Identities=17% Similarity=0.269 Sum_probs=84.7
Q ss_pred HHHHHHHHhhcCCCCCCcCHHHHHHHHHHc------CCCCCCC----CCCHHHHH-H-HHHHhCCCCCCccchHHHHHHH
Q psy12562 456 NEFRASFNHFDKNRTGRLAPEEFKSCLVSL------GYSIGKD----RQGEIDFQ-R-ILAVVDPNSTGYVHFDAFLDFM 523 (599)
Q Consensus 456 ~~~~~~F~~~d~~~~g~l~~~e~~~~l~~~------g~~~~~~----~~~~~~~~-~-~~~~~d~~~~g~I~~~eF~~~~ 523 (599)
..+.-.|..||.||+|.|+.+||..+..-+ |..-.+. +.-...+. . ..-.|.+++++++++++|+.++
T Consensus 233 ~~F~IAFKMFD~dgnG~IdkeEF~~v~~li~sQ~~~g~~hrd~~tt~~s~~~~~nsaL~~yFFG~rg~~kLs~deF~~F~ 312 (489)
T KOG2643|consen 233 RNFRIAFKMFDLDGNGEIDKEEFETVQQLIRSQTSVGVRHRDHFTTGNSFKVEVNSALLTYFFGKRGNGKLSIDEFLKFQ 312 (489)
T ss_pred ccceeeeeeeecCCCCcccHHHHHHHHHHHHhccccceecccCccccceehhhhhhhHHHHhhccCCCccccHHHHHHHH
Confidence 556778999999999999999998876422 2100000 00011111 2 2334688999999999999999
Q ss_pred hhhcCCCCCHHHHHHHHHhhhCC-CCCcCHHHHhccC------CcchHHHHHHhcCCCCCCCCCCCCccHHHHHHHh
Q psy12562 524 TRESTDTDTAEQVIDSFRILAGD-KPYILPDELRREL------PPDQAEYCIQRMPPYKGPNAIPGALDYQSFSTAL 593 (599)
Q Consensus 524 ~~~~~~~~~~~~~~~~F~~~D~d-~G~it~~el~~~l------~~~~~~~~~~~~~~~~d~~~~dg~i~~~eF~~~~ 593 (599)
..+. .+-+..=|..+|+. +|.|+..+|..+| +.+--....+.+-.....+ +.+|+++||....
T Consensus 313 e~Lq-----~Eil~lEF~~~~~~~~g~Ise~DFA~~lL~~a~~n~~~k~~~lkrvk~kf~~~--~~gISl~Ef~~Ff 382 (489)
T KOG2643|consen 313 ENLQ-----EEILELEFERFDKGDSGAISEVDFAELLLAYAGVNSKKKHKYLKRVKEKFKDD--GKGISLQEFKAFF 382 (489)
T ss_pred HHHH-----HHHHHHHHHHhCcccccccCHHHHHHHHHHHcccchHhHHHHHHHHHHhccCC--CCCcCHHHHHHHH
Confidence 7641 24455669999999 8999999999876 2222222233332323322 3579999987653
No 75
>cd05024 S-100A10 S-100A10: A subgroup of the S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A10 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=97.74 E-value=5.8e-05 Score=58.48 Aligned_cols=56 Identities=23% Similarity=0.476 Sum_probs=41.2
Q ss_pred HHHHHHHHhhhCCCCCcCHHHHhccC------------CcchHHHHHHhcCCCCCCCCCCCCccHHHHHHHhh
Q psy12562 534 EQVIDSFRILAGDKPYILPDELRREL------------PPDQAEYCIQRMPPYKGPNAIPGALDYQSFSTALY 594 (599)
Q Consensus 534 ~~~~~~F~~~D~d~G~it~~el~~~l------------~~~~~~~~~~~~~~~~d~~~~dg~i~~~eF~~~~~ 594 (599)
..+...|..|..+.|+++..||+.+| .|..++.++..+ |.|+ ||.|+|.||+..+.
T Consensus 8 ~~lI~~FhkYaG~~~tLsk~Elk~Ll~~Elp~~l~~~~d~~~vd~im~~L----D~n~-Dg~vdF~EF~~Lv~ 75 (91)
T cd05024 8 EKMMLTFHKFAGEKNYLNRDDLQKLMEKEFSEFLKNQNDPMAVDKIMKDL----DDCR-DGKVGFQSFFSLIA 75 (91)
T ss_pred HHHHHHHHHHcCCCCcCCHHHHHHHHHHHhHHHHcCCCCHHHHHHHHHHh----CCCC-CCcCcHHHHHHHHH
Confidence 45677888888667788888888876 244566555555 7777 88999999988764
No 76
>cd00051 EFh EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers.
Probab=97.71 E-value=0.00011 Score=53.30 Aligned_cols=60 Identities=13% Similarity=0.179 Sum_probs=47.2
Q ss_pred HHHHHHHhCCCCCCccchHHHHHHHhhhcCCCCCHHHHHHHHHhhhCC-CCCcCHHHHhccC
Q psy12562 499 FQRILAVVDPNSTGYVHFDAFLDFMTRESTDTDTAEQVIDSFRILAGD-KPYILPDELRREL 559 (599)
Q Consensus 499 ~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~~F~~~D~d-~G~it~~el~~~l 559 (599)
+..+|..+|.+++|.|++.+|..++... ....+.+.+..+|..+|.+ +|.|+..+|..++
T Consensus 2 ~~~~f~~~d~~~~g~l~~~e~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~ef~~~~ 62 (63)
T cd00051 2 LREAFRLFDKDGDGTISADELKAALKSL-GEGLSEEEIDEMIREVDKDGDGKIDFEEFLELM 62 (63)
T ss_pred HHHHHHHhCCCCCCcCcHHHHHHHHHHh-CCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHh
Confidence 4567888899999999999998888653 3445567788889999888 8888888886553
No 77
>PF00036 EF-hand_1: EF hand; InterPro: IPR018248 Many calcium-binding proteins belong to the same evolutionary family and share a type of calcium-binding domain known as the EF-hand. This type of domain consists of a twelve residue loop flanked on both sides by a twelve residue alpha-helical domain. In an EF-hand loop the calcium ion is coordinated in a pentagonal bipyramidal configuration. The six residues involved in the binding are in positions 1, 3, 5, 7, 9 and 12; these residues are denoted by X, Y, Z, -Y, -X and -Z. The invariant Glu or Asp at position 12 provides two oxygens for liganding Ca (bidentate ligand).; PDB: 1BJF_A 1XFW_R 1XFV_O 2K0J_A 2F3Z_A 3BYA_A 1XFU_Q 2R28_B 1ZOT_B 3G43_D ....
Probab=97.71 E-value=3.5e-05 Score=46.05 Aligned_cols=29 Identities=38% Similarity=0.725 Sum_probs=26.3
Q ss_pred HHHHHHHhhcCCCCCCcCHHHHHHHHHHc
Q psy12562 457 EFRASFNHFDKNRTGRLAPEEFKSCLVSL 485 (599)
Q Consensus 457 ~~~~~F~~~d~~~~g~l~~~e~~~~l~~~ 485 (599)
++..+|+.||+|++|+|+.+||..+++.+
T Consensus 1 E~~~~F~~~D~d~dG~I~~~Ef~~~~~~L 29 (29)
T PF00036_consen 1 ELKEAFREFDKDGDGKIDFEEFKEMMKKL 29 (29)
T ss_dssp HHHHHHHHHSTTSSSEEEHHHHHHHHHHT
T ss_pred CHHHHHHHHCCCCCCcCCHHHHHHHHHhC
Confidence 46889999999999999999999999764
No 78
>KOG0030|consensus
Probab=97.67 E-value=0.00012 Score=60.22 Aligned_cols=64 Identities=25% Similarity=0.544 Sum_probs=57.4
Q ss_pred HHHHHHHHHhhcCCCCCCcCHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhCCCCCCccchHHHHHHHh
Q psy12562 455 LNEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPNSTGYVHFDAFLDFMT 524 (599)
Q Consensus 455 ~~~~~~~F~~~d~~~~g~l~~~e~~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~ 524 (599)
.+.+.+..+.||++++|+|...+++.+|..+|..+ ++.+++.++.-.. |++|.|+|+.|+.-+.
T Consensus 87 ~edfvegLrvFDkeg~G~i~~aeLRhvLttlGekl-----~eeEVe~Llag~e-D~nG~i~YE~fVk~i~ 150 (152)
T KOG0030|consen 87 YEDFVEGLRVFDKEGNGTIMGAELRHVLTTLGEKL-----TEEEVEELLAGQE-DSNGCINYEAFVKHIM 150 (152)
T ss_pred HHHHHHHHHhhcccCCcceeHHHHHHHHHHHHhhc-----cHHHHHHHHcccc-ccCCcCcHHHHHHHHh
Confidence 47789999999999999999999999999999999 9999999887654 6789999999998653
No 79
>PLN02964 phosphatidylserine decarboxylase
Probab=97.65 E-value=0.00016 Score=77.10 Aligned_cols=71 Identities=17% Similarity=0.265 Sum_probs=63.5
Q ss_pred CCHHHHHHHHHHHHhhcCCCCCCcCHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhCCCCCCccchHHHHHHHhh
Q psy12562 450 ITQEQLNEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPNSTGYVHFDAFLDFMTR 525 (599)
Q Consensus 450 ~~~~~~~~~~~~F~~~d~~~~g~l~~~e~~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~ 525 (599)
.+..+...+..+|..+|.+++|.|+.+||..++..++... +.+++..+|+.+|.|++|.|+++||..++..
T Consensus 173 pte~e~~fi~~mf~~~D~DgdG~IdfdEFl~lL~~lg~~~-----seEEL~eaFk~fDkDgdG~Is~dEL~~vL~~ 243 (644)
T PLN02964 173 PVETERSFARRILAIVDYDEDGQLSFSEFSDLIKAFGNLV-----AANKKEELFKAADLNGDGVVTIDELAALLAL 243 (644)
T ss_pred CCHHHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHhccCC-----CHHHHHHHHHHhCCCCCCcCCHHHHHHHHHh
Confidence 4455555689999999999999999999999999888766 8889999999999999999999999998876
No 80
>smart00027 EH Eps15 homology domain. Pair of EF hand motifs that recognise proteins containing Asn-Pro-Phe (NPF) sequences.
Probab=97.59 E-value=0.00019 Score=57.68 Aligned_cols=60 Identities=13% Similarity=0.155 Sum_probs=49.3
Q ss_pred HHHHHHHHHhCCCCCCccchHHHHHHHhhhcCCCCCHHHHHHHHHhhhCC-CCCcCHHHHhccC
Q psy12562 497 IDFQRILAVVDPNSTGYVHFDAFLDFMTRESTDTDTAEQVIDSFRILAGD-KPYILPDELRREL 559 (599)
Q Consensus 497 ~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~~F~~~D~d-~G~it~~el~~~l 559 (599)
..+..+|..+|.+++|.|+++++..++... ..+.+.+..+|..+|.+ +|+|+.+||..++
T Consensus 10 ~~l~~~F~~~D~d~~G~Is~~el~~~l~~~---~~~~~ev~~i~~~~d~~~~g~I~~~eF~~~~ 70 (96)
T smart00027 10 AKYEQIFRSLDKNQDGTVTGAQAKPILLKS---GLPQTLLAKIWNLADIDNDGELDKDEFALAM 70 (96)
T ss_pred HHHHHHHHHhCCCCCCeEeHHHHHHHHHHc---CCCHHHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence 456678889999999999999999988662 24567888999999998 9999999998765
No 81
>PF13833 EF-hand_8: EF-hand domain pair; PDB: 3KF9_A 1TTX_A 1WLZ_A 1ALV_A 1NX3_A 1ALW_A 1NX2_A 1NX1_A 1NX0_A 1DF0_A ....
Probab=97.59 E-value=8.3e-05 Score=52.51 Aligned_cols=48 Identities=23% Similarity=0.234 Sum_probs=38.0
Q ss_pred CCccchHHHHHHHhhhcCCC-CCHHHHHHHHHhhhCC-CCCcCHHHHhccC
Q psy12562 511 TGYVHFDAFLDFMTRESTDT-DTAEQVIDSFRILAGD-KPYILPDELRREL 559 (599)
Q Consensus 511 ~g~I~~~eF~~~~~~~~~~~-~~~~~~~~~F~~~D~d-~G~it~~el~~~l 559 (599)
+|.|+.++|..++ ..+... .+.+++..+|..+|.+ +|+|+.+||..++
T Consensus 2 ~G~i~~~~~~~~l-~~~g~~~~s~~e~~~l~~~~D~~~~G~I~~~EF~~~~ 51 (54)
T PF13833_consen 2 DGKITREEFRRAL-SKLGIKDLSEEEVDRLFREFDTDGDGYISFDEFISMM 51 (54)
T ss_dssp SSEEEHHHHHHHH-HHTTSSSSCHHHHHHHHHHHTTSSSSSEEHHHHHHHH
T ss_pred cCEECHHHHHHHH-HHhCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHH
Confidence 6889999999998 434444 6677889999999988 8888888887653
No 82
>PF12763 EF-hand_4: Cytoskeletal-regulatory complex EF hand; PDB: 2QPT_A 2KSP_A 2KFG_A 2JQ6_A 2KFH_A 2KFF_A 1IQ3_A 3FIA_A 2KHN_A 2KGR_A ....
Probab=97.55 E-value=0.00018 Score=58.06 Aligned_cols=69 Identities=16% Similarity=0.356 Sum_probs=58.3
Q ss_pred CCCHHHHHHHHHHHHhhcCCCCCCcCHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhCCCCCCccchHHHHHHHhh
Q psy12562 449 GITQEQLNEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPNSTGYVHFDAFLDFMTR 525 (599)
Q Consensus 449 ~~~~~~~~~~~~~F~~~d~~~~g~l~~~e~~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~ 525 (599)
.+++++...+..+|...++ ++|.|+-.+...++...|. +...+..|+...|.+++|.++++||+.+|.-
T Consensus 3 ~ls~~e~~~y~~~F~~l~~-~~g~isg~~a~~~f~~S~L-------~~~~L~~IW~LaD~~~dG~L~~~EF~iAm~L 71 (104)
T PF12763_consen 3 KLSPEEKQKYDQIFQSLDP-QDGKISGDQAREFFMKSGL-------PRDVLAQIWNLADIDNDGKLDFEEFAIAMHL 71 (104)
T ss_dssp --SCCHHHHHHHHHHCTSS-STTEEEHHHHHHHHHHTTS-------SHHHHHHHHHHH-SSSSSEEEHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHhcCC-CCCeEeHHHHHHHHHHcCC-------CHHHHHHHHhhhcCCCCCcCCHHHHHHHHHH
Confidence 4677888999999999985 6899999999999887765 4578999999999999999999999998753
No 83
>PF13405 EF-hand_6: EF-hand domain; PDB: 2AMI_A 3QRX_A 1W7J_B 1OE9_B 1W7I_B 1KFU_S 1KFX_S 2BL0_B 1Y1X_B 3MSE_B ....
Probab=97.53 E-value=8.7e-05 Score=45.43 Aligned_cols=30 Identities=40% Similarity=0.662 Sum_probs=26.6
Q ss_pred HHHHHHHhhcCCCCCCcCHHHHHHHHH-HcC
Q psy12562 457 EFRASFNHFDKNRTGRLAPEEFKSCLV-SLG 486 (599)
Q Consensus 457 ~~~~~F~~~d~~~~g~l~~~e~~~~l~-~~g 486 (599)
+++.+|..||.|++|+|+.+||..+++ ++|
T Consensus 1 ~l~~~F~~~D~d~dG~I~~~el~~~l~~~lG 31 (31)
T PF13405_consen 1 RLREAFKMFDKDGDGFIDFEELRAILRKSLG 31 (31)
T ss_dssp HHHHHHHHH-TTSSSEEEHHHHHHHHHHHTT
T ss_pred CHHHHHHHHCCCCCCcCcHHHHHHHHHHhcC
Confidence 468899999999999999999999998 676
No 84
>KOG4666|consensus
Probab=97.50 E-value=5.6e-05 Score=71.06 Aligned_cols=119 Identities=11% Similarity=0.057 Sum_probs=86.1
Q ss_pred CCCCCcCHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhCCCCCCccchHHHHHHHhhhcCCCCCHHHHHHHHHhhhCC-
Q psy12562 468 NRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPNSTGYVHFDAFLDFMTRESTDTDTAEQVIDSFRILAGD- 546 (599)
Q Consensus 468 ~~~g~l~~~e~~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~~F~~~D~d- 546 (599)
.+.+.|...+|..-++. +. .+....+|..||.+++|.++|.+++..+......+.+.+-+.-+|+.|+.+
T Consensus 239 ~kg~~igi~efa~~l~v---pv------sd~l~~~f~LFde~~tg~~D~re~v~~lavlc~p~~t~~iiq~afk~f~v~e 309 (412)
T KOG4666|consen 239 AKGPDIGIVEFAVNLRV---PV------SDKLAPTFMLFDEGTTGNGDYRETVKTLAVLCGPPVTPVIIQYAFKRFSVAE 309 (412)
T ss_pred ccCCCcceeEeeeeeec---ch------hhhhhhhhheecCCCCCcccHHHHhhhheeeeCCCCcHHHHHHHHHhccccc
Confidence 34556766666654332 22 345677999999999999999999998888777778888999999999999
Q ss_pred CCCcCHHHHhccCC----cchHHHHHHhcCCCCCCCCCCCCccHHHHHHHhhcCCC
Q psy12562 547 KPYILPDELRRELP----PDQAEYCIQRMPPYKGPNAIPGALDYQSFSTALYGESD 598 (599)
Q Consensus 547 ~G~it~~el~~~l~----~~~~~~~~~~~~~~~d~~~~dg~i~~~eF~~~~~~~~~ 598 (599)
||+++..+|.-++. -+.+. +..+++..+... +|.|+|.+|-+.+...|.
T Consensus 310 Dg~~ge~~ls~ilq~~lgv~~l~--v~~lf~~i~q~d-~~ki~~~~f~~fa~~~p~ 362 (412)
T KOG4666|consen 310 DGISGEHILSLILQVVLGVEVLR--VPVLFPSIEQKD-DPKIYASNFRKFAATEPN 362 (412)
T ss_pred ccccchHHHHHHHHHhcCcceee--ccccchhhhccc-CcceeHHHHHHHHHhCch
Confidence 99999999987651 11111 112222223333 899999999998877654
No 85
>cd00213 S-100 S-100: S-100 domain, which represents the largest family within the superfamily of proteins carrying the Ca-binding EF-hand motif. Note that this S-100 hierarchy contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. Intracellularly, S100 proteins act as Ca-signaling or Ca-buffering proteins. The most unusual characteristic of certain S100 proteins is their occurrence in extracellular space, where they act in a cytokine-like manner through RAGE, the receptor for advanced glycation products. Structural data suggest that many S100 members exist within cells as homo- or heterodimers and even oligomers; oligomerization contributes to their functional diversification. Upon binding calcium, most S100 proteins change conformation to a more open structure exposing a hydrophobic cleft. This hydrophobic surface represents th
Probab=97.49 E-value=0.00016 Score=57.05 Aligned_cols=62 Identities=8% Similarity=0.046 Sum_probs=34.4
Q ss_pred HHHHHHHHhCC--CCCCccchHHHHHHHhhhcCC----CCCHHHHHHHHHhhhCC-CCCcCHHHHhccC
Q psy12562 498 DFQRILAVVDP--NSTGYVHFDAFLDFMTRESTD----TDTAEQVIDSFRILAGD-KPYILPDELRREL 559 (599)
Q Consensus 498 ~~~~~~~~~d~--~~~g~I~~~eF~~~~~~~~~~----~~~~~~~~~~F~~~D~d-~G~it~~el~~~l 559 (599)
.+..+|..+|. +++|.|++.+|..++...... ..+...+..+|..+|.+ +|.|+.++|..++
T Consensus 9 ~l~~~F~~~D~~~~~~G~Is~~el~~~l~~~~g~~~~~~~~~~ei~~i~~~~d~~~~g~I~f~eF~~~~ 77 (88)
T cd00213 9 TIIDVFHKYSGKEGDKDTLSKKELKELLETELPNFLKNQKDPEAVDKIMKDLDVNKDGKVDFQEFLVLI 77 (88)
T ss_pred HHHHHHHHHhhccCCCCcCcHHHHHHHHHHHhhhhccCCCCHHHHHHHHHHhccCCCCcCcHHHHHHHH
Confidence 34455666666 566666666666665431111 12345566666666666 6666666665543
No 86
>PRK12309 transaldolase/EF-hand domain-containing protein; Provisional
Probab=97.47 E-value=0.00064 Score=68.76 Aligned_cols=52 Identities=15% Similarity=0.254 Sum_probs=42.3
Q ss_pred HHHHHHHHhhcCCCCCCcCHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhCCCCCCccchHHHHHHHhh
Q psy12562 456 NEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPNSTGYVHFDAFLDFMTR 525 (599)
Q Consensus 456 ~~~~~~F~~~d~~~~g~l~~~e~~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~ 525 (599)
..+..+|..||.+++|.|+.+||.. +..+|..+|.|++|.|+++||..++..
T Consensus 334 ~~l~~aF~~~D~dgdG~Is~~E~~~------------------~~~~F~~~D~d~DG~Is~eEf~~~~~~ 385 (391)
T PRK12309 334 HAAQEIFRLYDLDGDGFITREEWLG------------------SDAVFDALDLNHDGKITPEEMRAGLGA 385 (391)
T ss_pred HHHHHHHHHhCCCCCCcCcHHHHHH------------------HHHHHHHhCCCCCCCCcHHHHHHHHHH
Confidence 6678889999999999999998831 345888889999999999999888754
No 87
>cd05030 calgranulins Calgranulins: S-100 domain found in proteins belonging to the Calgranulin subgroup of the S100 family of EF-hand calcium-modulated proteins, including S100A8, S100A9, and S100A12 . Note that the S-100 hierarchy, to which this Calgranulin group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. These proteins are expressed mainly in granulocytes, and are involved in inflammation, allergy, and neuritogenesis, as well as in host-parasite response. Calgranulins are modulated not only by calcium, but also by other metals such as zinc and copper. Structural data suggested that calgranulins may exist in multiple structural forms, homodimers, as well as hetero-oligomers. For example, the S100A8/S100A9 complex called calprotectin plays important roles in the regulation of inflammatory processes, wound repair, and regulating zinc-dependent enzymes as well as microbial growth.
Probab=97.46 E-value=0.00018 Score=56.51 Aligned_cols=60 Identities=15% Similarity=0.266 Sum_probs=33.8
Q ss_pred HHHHHHHHhhhCC---CCCcCHHHHhccCCc---chH-----HHHHHhcCCCCCCCCCCCCccHHHHHHHhh
Q psy12562 534 EQVIDSFRILAGD---KPYILPDELRRELPP---DQA-----EYCIQRMPPYKGPNAIPGALDYQSFSTALY 594 (599)
Q Consensus 534 ~~~~~~F~~~D~d---~G~it~~el~~~l~~---~~~-----~~~~~~~~~~~d~~~~dg~i~~~eF~~~~~ 594 (599)
..+...|+.|+.. +|+|+..||+.+|.. ..+ +..+..|+...|.++ +|.|+|++|+..|.
T Consensus 8 ~~~~~~f~~y~~~~~~~~~Is~~El~~ll~~~~g~~~t~~~~~~~v~~i~~~~D~d~-dG~I~f~eF~~~~~ 78 (88)
T cd05030 8 ETIINVFHQYSVRKGHPDTLYKKEFKQLVEKELPNFLKKEKNQKAIDKIFEDLDTNQ-DGQLSFEEFLVLVI 78 (88)
T ss_pred HHHHHHHHHHhccCCCcccCCHHHHHHHHHHHhhHhhccCCCHHHHHHHHHHcCCCC-CCcCcHHHHHHHHH
Confidence 3455666666633 467777777766620 000 222334444446666 77777777777654
No 88
>PF14658 EF-hand_9: EF-hand domain
Probab=97.44 E-value=7.2e-05 Score=53.74 Aligned_cols=54 Identities=17% Similarity=0.358 Sum_probs=37.0
Q ss_pred HHHhhhCC-CCCcCHHHHhccC------CcchHHHHHHhcCCCCCCCCCCCCccHHHHHHHhh
Q psy12562 539 SFRILAGD-KPYILPDELRREL------PPDQAEYCIQRMPPYKGPNAIPGALDYQSFSTALY 594 (599)
Q Consensus 539 ~F~~~D~d-~G~it~~el~~~l------~~~~~~~~~~~~~~~~d~~~~dg~i~~~eF~~~~~ 594 (599)
+|..||++ .|.|....+..+| +|.+.+ +..+....|++|.||.|+++.|+..|.
T Consensus 3 ~F~~fD~~~tG~V~v~~l~~~Lra~~~~~p~e~~--Lq~l~~elDP~g~~~~v~~d~F~~iM~ 63 (66)
T PF14658_consen 3 AFDAFDTQKTGRVPVSDLITYLRAVTGRSPEESE--LQDLINELDPEGRDGSVNFDTFLAIMR 63 (66)
T ss_pred chhhcCCcCCceEeHHHHHHHHHHHcCCCCcHHH--HHHHHHHhCCCCCCceEeHHHHHHHHH
Confidence 57888888 8888888887776 233222 334444458887568888888888775
No 89
>KOG0038|consensus
Probab=97.35 E-value=0.00056 Score=56.56 Aligned_cols=95 Identities=13% Similarity=0.144 Sum_probs=74.4
Q ss_pred HHHHhhcCCCCCCcCHHHHHHHHHHcCC-CCCCCCCCHHHHHHHHHHhCCCCCCccchHHHHHHHhhhcCCCCCHHHHHH
Q psy12562 460 ASFNHFDKNRTGRLAPEEFKSCLVSLGY-SIGKDRQGEIDFQRILAVVDPNSTGYVHFDAFLDFMTRESTDTDTAEQVID 538 (599)
Q Consensus 460 ~~F~~~d~~~~g~l~~~e~~~~l~~~g~-~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~ 538 (599)
.+...|..||.|.+++++|-.++..+.. .| -.-.+.-.|+.+|-|+|+.|.-.+....+.....+..+.+++..
T Consensus 75 ri~e~FSeDG~GnlsfddFlDmfSV~sE~AP-----rdlK~~YAFkIYDfd~D~~i~~~DL~~~l~~lTr~eLs~eEv~~ 149 (189)
T KOG0038|consen 75 RICEVFSEDGRGNLSFDDFLDMFSVFSEMAP-----RDLKAKYAFKIYDFDGDEFIGHDDLEKTLTSLTRDELSDEEVEL 149 (189)
T ss_pred HHHHHhccCCCCcccHHHHHHHHHHHHhhCh-----HHhhhhheeEEeecCCCCcccHHHHHHHHHHHhhccCCHHHHHH
Confidence 4556677899999999999999876643 33 23334446788999999999999999999888777777777665
Q ss_pred HHH----hhhCC-CCCcCHHHHhccC
Q psy12562 539 SFR----ILAGD-KPYILPDELRREL 559 (599)
Q Consensus 539 ~F~----~~D~d-~G~it~~el~~~l 559 (599)
+.. -.|-| +|.|+..||.+++
T Consensus 150 i~ekvieEAD~DgDgkl~~~eFe~~i 175 (189)
T KOG0038|consen 150 ICEKVIEEADLDGDGKLSFAEFEHVI 175 (189)
T ss_pred HHHHHHHHhcCCCCCcccHHHHHHHH
Confidence 544 45888 9999999998875
No 90
>PF14788 EF-hand_10: EF hand; PDB: 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B 1DJZ_B 1DJY_B 1DJX_B 1QAT_A 1DJH_A ....
Probab=97.33 E-value=0.00057 Score=46.14 Aligned_cols=49 Identities=16% Similarity=0.314 Sum_probs=40.7
Q ss_pred CcCHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhCCCCCCccchHHHHHHHhh
Q psy12562 472 RLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPNSTGYVHFDAFLDFMTR 525 (599)
Q Consensus 472 ~l~~~e~~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~ 525 (599)
++++.|++.+++.++..+ ++..+..+|+.+|.+++|.++.+||..++..
T Consensus 1 kmsf~Evk~lLk~~NI~~-----~~~yA~~LFq~~D~s~~g~Le~~Ef~~Fy~~ 49 (51)
T PF14788_consen 1 KMSFKEVKKLLKMMNIEM-----DDEYARQLFQECDKSQSGRLEGEEFEEFYKR 49 (51)
T ss_dssp EBEHHHHHHHHHHTT---------HHHHHHHHHHH-SSSSSEBEHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHccCc-----CHHHHHHHHHHhcccCCCCccHHHHHHHHHH
Confidence 367899999999999999 9999999999999999999999999999865
No 91
>PF12128 DUF3584: Protein of unknown function (DUF3584); InterPro: IPR021979 This family consist of uncharacterised bacterial proteins.
Probab=97.33 E-value=0.51 Score=56.20 Aligned_cols=130 Identities=20% Similarity=0.248 Sum_probs=67.3
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHhcccCCCCCCCHHHHHHHHHHHHHHHHh
Q psy12562 71 IANAWKGLETSEKSFEEWLLSEMMRLERLEHLAQKFKHKADIHEDWTRGKEEMLQSSDFRQCKLNELKALKKKHEAFESD 150 (599)
Q Consensus 71 l~~~w~~L~~~~~~r~~~L~~~~~rl~~l~~l~~~f~~~~~~~~~Wl~~~e~~l~~~~~~~~~l~~v~~~l~~h~~~~~e 150 (599)
....|..+.......-..+...+. ..-..|......+..|.... |.+. | -|...+..+-.+.+.++.+
T Consensus 719 ~~~~~~~~~~~~d~~i~~i~~~i~------~~~~~~~~~~~~le~~~~~e---L~~~--G-vD~~~I~~l~~~i~~L~~~ 786 (1201)
T PF12128_consen 719 LKAQWQELEAELDEQIEQIKQEIA------AAKQEAKEQLKELEQQYNQE---LAGK--G-VDPERIQQLKQEIEQLEKE 786 (1201)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHH---HHhC--C-CCHHHHHHHHHHHHHHHHH
Confidence 445555555443333333332222 33357888888888888743 4443 3 4777777777777777777
Q ss_pred HHhhHHHHHHHHHHHHHHhhccC------CCchh-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy12562 151 LAAHQDRVEQIAAIAQELNTLEY------HDSVS-------VNARCQRICDQWDHLGALTQQRRHALDEAEKILE 212 (599)
Q Consensus 151 l~~~~~~v~~l~~~~~~L~~~~~------~~~~~-------i~~~~~~l~~rw~~L~~~~~~R~~~L~~~~~~~q 212 (599)
|......-..|..=-.-+..... ...+. +..++..+..+...+...+..+...|+..+....
T Consensus 787 l~~ie~~r~~V~eY~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~le~~~~~~~ 861 (1201)
T PF12128_consen 787 LKRIEERRAEVIEYEDWLQEEWDKVDELREEKPELEEQLRDLEQELQELEQELNQLQKEVKQRRKELEEELKALE 861 (1201)
T ss_pred HHHHHHhHHHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66554443333332222211110 12333 4444445555555555555666666655554443
No 92
>KOG0169|consensus
Probab=97.20 E-value=0.0042 Score=65.99 Aligned_cols=135 Identities=25% Similarity=0.353 Sum_probs=109.9
Q ss_pred HHHHHHHHHHHHhhcCCCCCCcCHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhCCCCCCccchHHHHHHHhhhcCCCC
Q psy12562 452 QEQLNEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPNSTGYVHFDAFLDFMTRESTDTD 531 (599)
Q Consensus 452 ~~~~~~~~~~F~~~d~~~~g~l~~~e~~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~~ 531 (599)
.....-+..+|...|++++|.++..+...+++.++..+ +..-+..+|+..+..++|.+...+|+.+.......
T Consensus 132 ~~~~~wi~~~~~~ad~~~~~~~~~~~~~~~~~~~n~~l-----~~~~~~~~f~e~~~~~~~k~~~~~~~~~~~~~~~r-- 204 (746)
T KOG0169|consen 132 SRREHWIHSIFQEADKNKNGHMSFDEVLDLLKQLNVQL-----SESKARRLFKESDNSQTGKLEEEEFVKFRKELTKR-- 204 (746)
T ss_pred chHHHHHHHHHHHHccccccccchhhHHHHHHHHHHhh-----hHHHHHHHHHHHHhhccceehHHHHHHHHHhhccC--
Confidence 34446678999999999999999999999999998888 88888899999988899999999999987664322
Q ss_pred CHHHHHHHHHhhhCCCCCcCHHHHhccC---------CcchHHHHHHhcCCCCCCCCCCCCccHHHHHHHhhcC
Q psy12562 532 TAEQVIDSFRILAGDKPYILPDELRREL---------PPDQAEYCIQRMPPYKGPNAIPGALDYQSFSTALYGE 596 (599)
Q Consensus 532 ~~~~~~~~F~~~D~d~G~it~~el~~~l---------~~~~~~~~~~~~~~~~d~~~~dg~i~~~eF~~~~~~~ 596 (599)
.++...|..+-.+.++++..+|..+| +.+.++.++...-....... .+.++++.|...|+..
T Consensus 205 --pev~~~f~~~s~~~~~ls~~~L~~Fl~~~q~e~~~~~~~ae~ii~~~e~~k~~~~-~~~l~ldgF~~yL~S~ 275 (746)
T KOG0169|consen 205 --PEVYFLFVQYSHGKEYLSTDDLLRFLEEEQGEDGATLDEAEEIIERYEPSKEFRR-HGLLSLDGFTRYLFSP 275 (746)
T ss_pred --chHHHHHHHHhCCCCccCHHHHHHHHHHhcccccccHHHHHHHHHHhhhhhhccc-cceecHHHHHHHhcCc
Confidence 28899999998778999999999987 34567777766633333223 5679999999999875
No 93
>PF13202 EF-hand_5: EF hand; PDB: 3DD4_A 2Q4U_A 2BE4_A 1UHJ_B 1UHI_A 1UHH_B 1EJ3_B 1UHK_A 2ZFD_A 1UHN_A ....
Probab=97.03 E-value=0.00088 Score=38.43 Aligned_cols=23 Identities=17% Similarity=0.470 Sum_probs=15.5
Q ss_pred HHHHHHhCCCCCCccchHHHHHH
Q psy12562 500 QRILAVVDPNSTGYVHFDAFLDF 522 (599)
Q Consensus 500 ~~~~~~~d~~~~g~I~~~eF~~~ 522 (599)
+..|..+|.|+||.|+++||..+
T Consensus 2 ~~~F~~~D~d~DG~is~~E~~~~ 24 (25)
T PF13202_consen 2 KDAFQQFDTDGDGKISFEEFQRL 24 (25)
T ss_dssp HHHHHHHTTTSSSEEEHHHHHHH
T ss_pred HHHHHHHcCCCCCcCCHHHHHHH
Confidence 45666777777777777777654
No 94
>KOG0041|consensus
Probab=96.98 E-value=0.00072 Score=59.28 Aligned_cols=58 Identities=19% Similarity=0.269 Sum_probs=38.0
Q ss_pred HHHHHHHhhhCC-CCCcCHHHHhccCC---cchHHHHHHhcCCCCCCCCCCCCccHHHHHHHh
Q psy12562 535 QVIDSFRILAGD-KPYILPDELRRELP---PDQAEYCIQRMPPYKGPNAIPGALDYQSFSTAL 593 (599)
Q Consensus 535 ~~~~~F~~~D~d-~G~it~~el~~~l~---~~~~~~~~~~~~~~~d~~~~dg~i~~~eF~~~~ 593 (599)
....+|..||.+ ||||+..||+.+|. ..+.---+++|+...|.|. ||.|+|.+|+-.+
T Consensus 100 ~~~~~Fk~yDe~rDgfIdl~ELK~mmEKLgapQTHL~lK~mikeVded~-dgklSfreflLIf 161 (244)
T KOG0041|consen 100 DAESMFKQYDEDRDGFIDLMELKRMMEKLGAPQTHLGLKNMIKEVDEDF-DGKLSFREFLLIF 161 (244)
T ss_pred HHHHHHHHhcccccccccHHHHHHHHHHhCCchhhHHHHHHHHHhhccc-ccchhHHHHHHHH
Confidence 566678888888 88888888877761 2223333555555556666 7888888876443
No 95
>KOG0377|consensus
Probab=96.96 E-value=0.0021 Score=63.19 Aligned_cols=65 Identities=20% Similarity=0.413 Sum_probs=55.7
Q ss_pred HHHHHHHHhhcCCCCCCcCHHHHHHHHHHcC----CCCCCCCCCHHHHHHHHHHhCCCCCCccchHHHHHHHhh
Q psy12562 456 NEFRASFNHFDKNRTGRLAPEEFKSCLVSLG----YSIGKDRQGEIDFQRILAVVDPNSTGYVHFDAFLDFMTR 525 (599)
Q Consensus 456 ~~~~~~F~~~d~~~~g~l~~~e~~~~l~~~g----~~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~ 525 (599)
..+..+|+.+|.|++|.|+.+||..++..++ ..+ +...+..+.+.+|-|+||.|++.||+..+..
T Consensus 547 s~LetiF~~iD~D~SG~isldEF~~a~~l~~sh~~~~i-----~~~~i~~la~~mD~NkDG~IDlNEfLeAFrl 615 (631)
T KOG0377|consen 547 SSLETIFNIIDADNSGEISLDEFRTAWKLLSSHMNGAI-----SDDEILELARSMDLNKDGKIDLNEFLEAFRL 615 (631)
T ss_pred hhHHHHHHHhccCCCCceeHHHHHHHHHHHHhhcCCCc-----CHHHHHHHHHhhccCCCCcccHHHHHHHHhh
Confidence 4567899999999999999999999887654 344 7888889999999999999999999987653
No 96
>KOG4065|consensus
Probab=96.89 E-value=0.00082 Score=53.11 Aligned_cols=32 Identities=22% Similarity=0.278 Sum_probs=27.7
Q ss_pred CcchHHHHHHhcCCCCCCCCCCCCccHHHHHHH
Q psy12562 560 PPDQAEYCIQRMPPYKGPNAIPGALDYQSFSTA 592 (599)
Q Consensus 560 ~~~~~~~~~~~~~~~~d~~~~dg~i~~~eF~~~ 592 (599)
+..+++.+++.+.+..|.|+ ||.|+|-||.+.
T Consensus 111 sE~Ele~~iD~vL~DdDfN~-DG~IDYgEflK~ 142 (144)
T KOG4065|consen 111 SEAELERLIDAVLDDDDFNG-DGVIDYGEFLKR 142 (144)
T ss_pred CHHHHHHHHHHHhcccccCC-CceeeHHHHHhh
Confidence 34678888999998888888 999999999875
No 97
>KOG2562|consensus
Probab=96.89 E-value=0.0055 Score=61.15 Aligned_cols=95 Identities=19% Similarity=0.234 Sum_probs=59.2
Q ss_pred HHHHHhCCCCCCccchHHHHHHH-----hhhcCC--------CCCHHHHHHH---HHhhhCC-CCCcCHHHHhccC----
Q psy12562 501 RILAVVDPNSTGYVHFDAFLDFM-----TRESTD--------TDTAEQVIDS---FRILAGD-KPYILPDELRREL---- 559 (599)
Q Consensus 501 ~~~~~~d~~~~g~I~~~eF~~~~-----~~~~~~--------~~~~~~~~~~---F~~~D~d-~G~it~~el~~~l---- 559 (599)
.+|=.+++.++|+|+..+.+..- ...... --+.+....+ |-.+|+| +|.|+.++|..+-
T Consensus 229 rIFy~~nrs~tG~iti~el~~snll~~l~~l~eEed~nq~~~~FS~e~f~viy~kFweLD~Dhd~lidk~~L~ry~d~tl 308 (493)
T KOG2562|consen 229 RIFYYLNRSRTGRITIQELLRSNLLDALLELDEEEDINQVTRYFSYEHFYVIYCKFWELDTDHDGLIDKEDLKRYGDHTL 308 (493)
T ss_pred hhheeeCCccCCceeHHHHHHhHHHHHHHHHHHHhhhhhhhhheeHHHHHHHHHHHhhhccccccccCHHHHHHHhccch
Confidence 44444567778888777755431 110000 0012333333 7788999 9999999999864
Q ss_pred CcchHHHHHHhcCCCCCCCCCCCCccHHHHHHHhhcC
Q psy12562 560 PPDQAEYCIQRMPPYKGPNAIPGALDYQSFSTALYGE 596 (599)
Q Consensus 560 ~~~~~~~~~~~~~~~~d~~~~dg~i~~~eF~~~~~~~ 596 (599)
+.-.++.++..+.+..-.-+ +|.++|++|+..++..
T Consensus 309 t~~ivdRIFs~v~r~~~~~~-eGrmdykdFv~FilA~ 344 (493)
T KOG2562|consen 309 TERIVDRIFSQVPRGFTVKV-EGRMDYKDFVDFILAE 344 (493)
T ss_pred hhHHHHHHHhhccccceeee-cCcccHHHHHHHHHHh
Confidence 44556666664433333334 8999999999998764
No 98
>PF10591 SPARC_Ca_bdg: Secreted protein acidic and rich in cysteine Ca binding region; InterPro: IPR019577 This entry represents the calcium-binding domain found in SPARC (Secreted Protein Acidic and Rich in Cysteine) and Testican (also known as SPOCK; or SParc/Osteonectin, Cwcv and Kazal-like domains) proteins. SPARC proteins are down-regulated in various tumours and may have a tumour-suppressor function [, ]. Testican-3 appears to be a novel regulator that reduces the activity of matrix metalloproteinase (MMP) in adult T-cell leukemia (ATL) []. This cysteine-rich domain is responsible for the anti-spreading activity of human urothelial cells. This extracellular calcium-binding domain is rich in alpha-helices and contains two EF-hands that each coordinates one Ca2+ ion, forming a helix-loop-helix structure that not only drives the conformation of the protein but is also necessary for biological activity. The anti-spreading activity was dependent on the coordination of Ca2+ by a Glu residue at the Z position of EF-hand 2 []. ; GO: 0005509 calcium ion binding, 0007165 signal transduction, 0005578 proteinaceous extracellular matrix; PDB: 1BMO_A 1SRA_A 2V53_A 1NUB_B.
Probab=96.87 E-value=0.0032 Score=51.85 Aligned_cols=65 Identities=22% Similarity=0.245 Sum_probs=46.4
Q ss_pred CHHHHHHHHHHHHhhcCCCCCCcCHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhCCCCCCccchHHHHHH
Q psy12562 451 TQEQLNEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPNSTGYVHFDAFLDF 522 (599)
Q Consensus 451 ~~~~~~~~~~~F~~~d~~~~g~l~~~e~~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~ 522 (599)
.......+.=.|..+|.|+||.|+..|+..+...+ .+ .+.=+..+++..|.|+||.|++.|+..+
T Consensus 49 ~~~~~~~~~W~F~~LD~n~d~~L~~~El~~l~~~l--~~-----~e~C~~~F~~~CD~n~d~~Is~~EW~~C 113 (113)
T PF10591_consen 49 YSECKRVVHWKFCQLDRNKDGVLDRSELKPLRRPL--MP-----PEHCARPFFRSCDVNKDGKISLDEWCNC 113 (113)
T ss_dssp GGGGHHHHHHHHHHH--T-SSEE-TTTTGGGGSTT--ST-----TGGGHHHHHHHH-TT-SSSEEHHHHHHH
T ss_pred hhhhhhhhhhhHhhhcCCCCCccCHHHHHHHHHHH--hh-----hHHHHHHHHHHcCCCCCCCCCHHHHccC
Confidence 34455667778999999999999999999886544 33 4555677999999999999999998753
No 99
>KOG0046|consensus
Probab=96.84 E-value=0.0033 Score=63.42 Aligned_cols=75 Identities=23% Similarity=0.415 Sum_probs=65.2
Q ss_pred cCCCHHHHHHHHHHHHhhcCCCCCCcCHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhCCCCCCccchHHHHHHHhh
Q psy12562 448 KGITQEQLNEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPNSTGYVHFDAFLDFMTR 525 (599)
Q Consensus 448 ~~~~~~~~~~~~~~F~~~d~~~~g~l~~~e~~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~ 525 (599)
+.+|.+++..+++.|...| +++|+++..++..++...+... .-...++++.++...+.|.+|.|+|++|+..+..
T Consensus 11 ~~~tq~El~~l~~kF~~~d-~~~G~v~~~~l~~~f~k~~~~~--g~~~~eei~~~l~~~~~~~~g~v~fe~f~~~~~~ 85 (627)
T KOG0046|consen 11 SQLTQEELRELKEKFNKLD-DQKGYVTVYELPDAFKKAKLPL--GYFVREEIKEILGEVGVDADGRVEFEEFVGIFLN 85 (627)
T ss_pred ccccHHHHHHHHHHHHhhc-CCCCeeehHHhHHHHHHhcccc--cchhHHHHHHHHhccCCCcCCccCHHHHHHHHHh
Confidence 4678999999999999999 9999999999999998876544 1125889999999999999999999999997654
No 100
>KOG4240|consensus
Probab=96.74 E-value=0.092 Score=58.39 Aligned_cols=145 Identities=18% Similarity=0.189 Sum_probs=108.5
Q ss_pred chhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHhcccCCCCCCCHHHHHHHHHHHHH
Q psy12562 67 MVSDIANAWKGLETSEKSFEEWLLSEMMRLERLEHLAQKFKHKADIHEDWTRGKEEMLQSSDFRQCKLNELKALKKKHEA 146 (599)
Q Consensus 67 ~~~~l~~~w~~L~~~~~~r~~~L~~~~~rl~~l~~l~~~f~~~~~~~~~Wl~~~e~~l~~~~~~~~~l~~v~~~l~~h~~ 146 (599)
.++.+++.-..+......+.-.-.....|+....++. ....+...+..|+++-...+..-...++++.....+..+|..
T Consensus 242 mve~vQ~~le~l~~~~q~~El~~d~~s~rl~~a~~l~-~l~~~k~qv~~~~rng~smLt~~~~~~s~~~et~~Lq~~~~~ 320 (1025)
T KOG4240|consen 242 MVEAVQGLLESLEEEVQRLELPADVRSTRLEQASQLA-KLLEDKNQVLALIRNGLSMLTQLRVLASDLSETSQLQREHRQ 320 (1025)
T ss_pred HHHHHHHHHHhHHHHHHhhcchhhchhhHHHHHHHHH-HHHHHHHHHHHHHhcchhhhhhhccCCCcCCccHHHHhhHhh
Confidence 3444555555555554444444444444555555555 888999999999999999888866666788888888999999
Q ss_pred HHHhHHhhH-HHHHHHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy12562 147 FESDLAAHQ-DRVEQIAAIAQELNTLEYHDSVSVNARCQRICDQWDHLGALTQQRRHALDEAEKILE 212 (599)
Q Consensus 147 ~~~el~~~~-~~v~~l~~~~~~L~~~~~~~~~~i~~~~~~l~~rw~~L~~~~~~R~~~L~~~~~~~q 212 (599)
|..-..... ..--.+...+..+....|+...++..++..++.+|..|...+..|-+.+..+.....
T Consensus 321 f~d~~e~k~~~~q~~~~~~a~~~~~~~h~~~~e~~~~le~~~t~~qql~~~~e~r~~~vaa~~~~~~ 387 (1025)
T KOG4240|consen 321 FQDAQEVKTLLSQLQVQQKAFDLLQNKHQNRDESLEKLETLQTKWQQLMTAMEDRLKLVAAAVAFYK 387 (1025)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhchhhhHHHHHHhHHHHhhhHHHHHHHHHHHHHHHHHHHHHhc
Confidence 987766622 223334555667778899999999999999999999999999999999998877554
No 101
>KOG0751|consensus
Probab=96.71 E-value=0.0044 Score=61.92 Aligned_cols=96 Identities=13% Similarity=0.144 Sum_probs=73.7
Q ss_pred HHHHHHHHhhcCCCCCCcCHHHHHHHHHHcCCCCCC-CCCCHHHHHHHHHHhCCCCCCccchHHHHHHHhhhcCCCCCHH
Q psy12562 456 NEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGK-DRQGEIDFQRILAVVDPNSTGYVHFDAFLDFMTRESTDTDTAE 534 (599)
Q Consensus 456 ~~~~~~F~~~d~~~~g~l~~~e~~~~l~~~g~~~~~-~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~ 534 (599)
.....+|..||+.++|.++.+++..++..+...-.. -+.+.+.+...|. .+....++|.+|.+++..+- .+
T Consensus 108 al~~~aFqlFDr~~~~~vs~~~~~~if~~t~l~~~~~f~~d~efI~~~Fg---~~~~r~~ny~~f~Q~lh~~~-----~E 179 (694)
T KOG0751|consen 108 ALFEVAFQLFDRLGNGEVSFEDVADIFGQTNLHHHIPFNWDSEFIKLHFG---DIRKRHLNYAEFTQFLHEFQ-----LE 179 (694)
T ss_pred HHHHHHHHHhcccCCCceehHHHHHHHhccccccCCCccCCcchHHHHhh---hHHHHhccHHHHHHHHHHHH-----HH
Confidence 557889999999999999999999999876431110 0114445555443 34556799999999998742 36
Q ss_pred HHHHHHHhhhCC-CCCcCHHHHhccC
Q psy12562 535 QVIDSFRILAGD-KPYILPDELRREL 559 (599)
Q Consensus 535 ~~~~~F~~~D~d-~G~it~~el~~~l 559 (599)
.-..+|+..|+. +|+||.-+|+.++
T Consensus 180 ~~~qafr~~d~~~ng~is~Ldfq~im 205 (694)
T KOG0751|consen 180 HAEQAFREKDKAKNGFISVLDFQDIM 205 (694)
T ss_pred HHHHHHHHhcccCCCeeeeechHhhh
Confidence 789999999999 9999999999876
No 102
>PRK12309 transaldolase/EF-hand domain-containing protein; Provisional
Probab=96.69 E-value=0.0034 Score=63.61 Aligned_cols=50 Identities=22% Similarity=0.312 Sum_probs=27.6
Q ss_pred CHHHHHHHHHHhCCCCCCccchHHHHHHHhhhcCCCCCHHHHHHHHHhhhCC-CCCcCHHHHhcc
Q psy12562 495 GEIDFQRILAVVDPNSTGYVHFDAFLDFMTRESTDTDTAEQVIDSFRILAGD-KPYILPDELRRE 558 (599)
Q Consensus 495 ~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~~F~~~D~d-~G~it~~el~~~ 558 (599)
....+..+|+.+|.+++|.|+++||+. +..+|..+|.| +|.|+.+||..+
T Consensus 332 ~~~~l~~aF~~~D~dgdG~Is~~E~~~--------------~~~~F~~~D~d~DG~Is~eEf~~~ 382 (391)
T PRK12309 332 FTHAAQEIFRLYDLDGDGFITREEWLG--------------SDAVFDALDLNHDGKITPEEMRAG 382 (391)
T ss_pred hhHHHHHHHHHhCCCCCCcCcHHHHHH--------------HHHHHHHhCCCCCCCCcHHHHHHH
Confidence 445555566666666666666666531 23445555655 566666555544
No 103
>PF13202 EF-hand_5: EF hand; PDB: 3DD4_A 2Q4U_A 2BE4_A 1UHJ_B 1UHI_A 1UHH_B 1EJ3_B 1UHK_A 2ZFD_A 1UHN_A ....
Probab=96.66 E-value=0.0016 Score=37.38 Aligned_cols=25 Identities=28% Similarity=0.701 Sum_probs=22.1
Q ss_pred HHHHHHhhcCCCCCCcCHHHHHHHH
Q psy12562 458 FRASFNHFDKNRTGRLAPEEFKSCL 482 (599)
Q Consensus 458 ~~~~F~~~d~~~~g~l~~~e~~~~l 482 (599)
++..|..+|.|++|.|+..||..++
T Consensus 1 l~~~F~~~D~d~DG~is~~E~~~~~ 25 (25)
T PF13202_consen 1 LKDAFQQFDTDGDGKISFEEFQRLV 25 (25)
T ss_dssp HHHHHHHHTTTSSSEEEHHHHHHHH
T ss_pred CHHHHHHHcCCCCCcCCHHHHHHHC
Confidence 4678999999999999999998753
No 104
>KOG0751|consensus
Probab=96.53 E-value=0.034 Score=55.91 Aligned_cols=97 Identities=16% Similarity=0.261 Sum_probs=68.5
Q ss_pred HHHHHHHH---hhcCCCCCCcCHHHHHHHHHHc-CCCCCCCCCCHHHHHHHHHHhCCCCCCccchHHHHHHHhhhcCCCC
Q psy12562 456 NEFRASFN---HFDKNRTGRLAPEEFKSCLVSL-GYSIGKDRQGEIDFQRILAVVDPNSTGYVHFDAFLDFMTRESTDTD 531 (599)
Q Consensus 456 ~~~~~~F~---~~d~~~~g~l~~~e~~~~l~~~-g~~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~~ 531 (599)
.+++.+|. ..+.++...++.++|....-.+ +.+- .+...+.-+-...|..+||-|+|+||+.+=..+. .+
T Consensus 33 ~eLr~if~~~as~e~~ge~~mt~edFv~~ylgL~~e~~----~n~~~v~Lla~iaD~tKDglisf~eF~afe~~lC-~p- 106 (694)
T KOG0751|consen 33 KELRSIFLKYASIEKNGESYMTPEDFVRRYLGLYNESN----FNDKIVRLLASIADQTKDGLISFQEFRAFESVLC-AP- 106 (694)
T ss_pred HHHHHHHHHHhHHhhccccccCHHHHHHHHHhhccccc----CChHHHHHHHhhhhhcccccccHHHHHHHHhhcc-Cc-
Confidence 45555554 4567888899999998765444 3222 1444444445566788899999999998754432 22
Q ss_pred CHHHHHHHHHhhhCC-CCCcCHHHHhccC
Q psy12562 532 TAEQVIDSFRILAGD-KPYILPDELRREL 559 (599)
Q Consensus 532 ~~~~~~~~F~~~D~d-~G~it~~el~~~l 559 (599)
......+|..||+. +|.+|.+++.+++
T Consensus 107 -Dal~~~aFqlFDr~~~~~vs~~~~~~if 134 (694)
T KOG0751|consen 107 -DALFEVAFQLFDRLGNGEVSFEDVADIF 134 (694)
T ss_pred -hHHHHHHHHHhcccCCCceehHHHHHHH
Confidence 34567799999999 9999999999886
No 105
>PF13405 EF-hand_6: EF-hand domain; PDB: 2AMI_A 3QRX_A 1W7J_B 1OE9_B 1W7I_B 1KFU_S 1KFX_S 2BL0_B 1Y1X_B 3MSE_B ....
Probab=96.42 E-value=0.0043 Score=37.79 Aligned_cols=26 Identities=12% Similarity=0.528 Sum_probs=16.5
Q ss_pred HHHHHHHhCCCCCCccchHHHHHHHh
Q psy12562 499 FQRILAVVDPNSTGYVHFDAFLDFMT 524 (599)
Q Consensus 499 ~~~~~~~~d~~~~g~I~~~eF~~~~~ 524 (599)
+..+|..+|.+++|.|+++||..++.
T Consensus 2 l~~~F~~~D~d~dG~I~~~el~~~l~ 27 (31)
T PF13405_consen 2 LREAFKMFDKDGDGFIDFEELRAILR 27 (31)
T ss_dssp HHHHHHHH-TTSSSEEEHHHHHHHHH
T ss_pred HHHHHHHHCCCCCCcCcHHHHHHHHH
Confidence 45566667777777777777766654
No 106
>KOG4251|consensus
Probab=96.20 E-value=0.016 Score=52.66 Aligned_cols=134 Identities=13% Similarity=0.214 Sum_probs=76.4
Q ss_pred HHHHHHHhhcCCCCCCcCHHHHHHHHHHc-CCCC-------------CCC------------------------------
Q psy12562 457 EFRASFNHFDKNRTGRLAPEEFKSCLVSL-GYSI-------------GKD------------------------------ 492 (599)
Q Consensus 457 ~~~~~F~~~d~~~~g~l~~~e~~~~l~~~-g~~~-------------~~~------------------------------ 492 (599)
.-+-.|+..|+|++|.|+-++|+--+-++ |..- ..+
T Consensus 141 eSkthFraVDpdgDGhvsWdEykvkFlaskghsekevadairlneelkVDeEtqevlenlkdRwyqaDsppadlllteeE 220 (362)
T KOG4251|consen 141 ESKTHFRAVDPDGDGHVSWDEYKVKFLASKGHSEKEVADAIRLNEELKVDEETQEVLENLKDRWYQADSPPADLLLTEEE 220 (362)
T ss_pred hhhhheeeeCCCCCCceehhhhhhHHHhhcCcchHHHHHHhhccCcccccHHHHHHHHhhhhhhccccCchhhhhhhHHH
Confidence 34668999999999999999887655332 2211 000
Q ss_pred -----------CCCHHHHHHHHHHhCCCCCCccchHHHHHHHhhhcC---CCCC-----HHHHHHHHHhhhCC-CCCcCH
Q psy12562 493 -----------RQGEIDFQRILAVVDPNSTGYVHFDAFLDFMTREST---DTDT-----AEQVIDSFRILAGD-KPYILP 552 (599)
Q Consensus 493 -----------~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~---~~~~-----~~~~~~~F~~~D~d-~G~it~ 552 (599)
+.-...+..+++.+|.||+..++..+|+....+-.. +..- ....+..=..+|.+ +|.+|.
T Consensus 221 flsFLHPEhSrgmLrfmVkeivrdlDqdgDkqlSvpeFislpvGTVenqqgqdiddnwvkdRkkEFeElIDsNhDGivTa 300 (362)
T KOG4251|consen 221 FLSFLHPEHSRGMLRFMVKEIVRDLDQDGDKQLSVPEFISLPVGTVENQQGQDIDDNWVKDRKKEFEELIDSNHDGIVTA 300 (362)
T ss_pred HHHHcChHhhhhhHHHHHHHHHHHhccCCCeeecchhhhcCCCcchhhhhccchHHHHHHHHHHHHHHHhhcCCccceeH
Confidence 000122335667777888888888888776543111 1110 12233344556888 888888
Q ss_pred HHHhccCCcchHHH---HHHhcCCCCCCCCCCCCccHHHHHH
Q psy12562 553 DELRRELPPDQAEY---CIQRMPPYKGPNAIPGALDYQSFST 591 (599)
Q Consensus 553 ~el~~~l~~~~~~~---~~~~~~~~~d~~~~dg~i~~~eF~~ 591 (599)
+||-.++.|...-. -+..++...+.++ |..++.++...
T Consensus 301 eELe~y~dP~n~~~alne~~~~ma~~d~n~-~~~Ls~eell~ 341 (362)
T KOG4251|consen 301 EELEDYVDPQNFRLALNEVNDIMALTDANN-DEKLSLEELLE 341 (362)
T ss_pred HHHHhhcCchhhhhhHHHHHHHHhhhccCC-CcccCHHHHHH
Confidence 88888875532111 1122233345555 66777777654
No 107
>PF10591 SPARC_Ca_bdg: Secreted protein acidic and rich in cysteine Ca binding region; InterPro: IPR019577 This entry represents the calcium-binding domain found in SPARC (Secreted Protein Acidic and Rich in Cysteine) and Testican (also known as SPOCK; or SParc/Osteonectin, Cwcv and Kazal-like domains) proteins. SPARC proteins are down-regulated in various tumours and may have a tumour-suppressor function [, ]. Testican-3 appears to be a novel regulator that reduces the activity of matrix metalloproteinase (MMP) in adult T-cell leukemia (ATL) []. This cysteine-rich domain is responsible for the anti-spreading activity of human urothelial cells. This extracellular calcium-binding domain is rich in alpha-helices and contains two EF-hands that each coordinates one Ca2+ ion, forming a helix-loop-helix structure that not only drives the conformation of the protein but is also necessary for biological activity. The anti-spreading activity was dependent on the coordination of Ca2+ by a Glu residue at the Z position of EF-hand 2 []. ; GO: 0005509 calcium ion binding, 0007165 signal transduction, 0005578 proteinaceous extracellular matrix; PDB: 1BMO_A 1SRA_A 2V53_A 1NUB_B.
Probab=95.64 E-value=0.0035 Score=51.68 Aligned_cols=58 Identities=17% Similarity=0.165 Sum_probs=31.2
Q ss_pred HHHHHHHHhhhCC-CCCcCHHHHhccCCc-chHHHHHHhcCCCCCCCCCCCCccHHHHHHH
Q psy12562 534 EQVIDSFRILAGD-KPYILPDELRRELPP-DQAEYCIQRMPPYKGPNAIPGALDYQSFSTA 592 (599)
Q Consensus 534 ~~~~~~F~~~D~d-~G~it~~el~~~l~~-~~~~~~~~~~~~~~d~~~~dg~i~~~eF~~~ 592 (599)
..+..-|..+|.| +|+|+..|+..+..+ ...+.|+..++..-|.|+ ||.|++.||..+
T Consensus 54 ~~~~W~F~~LD~n~d~~L~~~El~~l~~~l~~~e~C~~~F~~~CD~n~-d~~Is~~EW~~C 113 (113)
T PF10591_consen 54 RVVHWKFCQLDRNKDGVLDRSELKPLRRPLMPPEHCARPFFRSCDVNK-DGKISLDEWCNC 113 (113)
T ss_dssp HHHHHHHHHH--T-SSEE-TTTTGGGGSTTSTTGGGHHHHHHHH-TT--SSSEEHHHHHHH
T ss_pred hhhhhhHhhhcCCCCCccCHHHHHHHHHHHhhhHHHHHHHHHHcCCCC-CCCCCHHHHccC
Confidence 4566667777777 777777777665421 112223333334446676 777777777653
No 108
>KOG0994|consensus
Probab=95.26 E-value=6.9 Score=44.31 Aligned_cols=28 Identities=25% Similarity=0.171 Sum_probs=18.7
Q ss_pred ChHHHHHHHHHHHHhhHhHhHHHHHHHH
Q psy12562 303 TANDLTKKWTDVRKLVPQRDTTLQAELR 330 (599)
Q Consensus 303 ~~~~l~~~w~~L~~~~~~R~~~L~~~l~ 330 (599)
.++.|...++....+++.|-..-..+.+
T Consensus 1662 ~~~~lq~~~~~~~~l~~~r~~g~~~ar~ 1689 (1758)
T KOG0994|consen 1662 GLEILQKYYELVDRLLEKRMEGSQAARE 1689 (1758)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcchhHHH
Confidence 3556777777777777777666666655
No 109
>PF05042 Caleosin: Caleosin related protein; InterPro: IPR007736 This family contains plant proteins related to caleosin. Caleosins contain calcium-binding domains and have an oleosin-like association with lipid bodies. Caleosins are present at relatively low levels and are mainly bound to microsomal membrane fractions at the early stages of seed development. As the seeds mature, overall levels of caleosins increased dramatically and they were associated almost exclusively with storage lipid bodies []. The calcium binding domain is probably related to the calcium-binding EF-hands motif IPR002048 from INTERPRO.
Probab=95.23 E-value=0.21 Score=43.63 Aligned_cols=103 Identities=13% Similarity=0.238 Sum_probs=66.4
Q ss_pred HHHHHHHHhhcCCCCCCcCHHHHHHHHHHcCCCCC----------------------------------------C----
Q psy12562 456 NEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIG----------------------------------------K---- 491 (599)
Q Consensus 456 ~~~~~~F~~~d~~~~g~l~~~e~~~~l~~~g~~~~----------------------------------------~---- 491 (599)
..++.-..-||.|+||.|.+-|--..++.+|+.+- .
T Consensus 7 T~LQqHvaFFDrd~DGiI~P~dTy~GFraLGf~~~~s~~aa~~I~~~lSy~T~~~w~p~P~f~Iyi~nIhk~kHGSDSg~ 86 (174)
T PF05042_consen 7 TVLQQHVAFFDRDKDGIIYPWDTYQGFRALGFGILLSLLAAFIIHGALSYPTQPSWIPDPFFRIYIKNIHKGKHGSDSGA 86 (174)
T ss_pred cHHhhhhceeCCCCCeeECHHHHHHHHHHhCCCHHHHHHHHHHHHcccCCccCCCCCCCCceeEEeecccccccCCCccc
Confidence 34667777899999999999998888888887550 0
Q ss_pred ----CCCCHHHHHHHHHHhCCCCCCccchHHHHHHHhhhcCCCC------CHHHHHHHHHhhhCC-CCCcCHHHHhccC
Q psy12562 492 ----DRQGEIDFQRILAVVDPNSTGYVHFDAFLDFMTRESTDTD------TAEQVIDSFRILAGD-KPYILPDELRREL 559 (599)
Q Consensus 492 ----~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~~------~~~~~~~~F~~~D~d-~G~it~~el~~~l 559 (599)
.+.....++.||..++..+.+.+++.|...++........ +.-++..+|... .+ +|++.++.++.+.
T Consensus 87 YD~eGrFvp~kFe~iF~kya~~~~d~LT~~E~~~m~~~nr~~~D~~GW~a~~~EW~~~y~L~-~d~dG~l~Ke~iR~vY 164 (174)
T PF05042_consen 87 YDTEGRFVPQKFEEIFSKYAKTGPDALTLRELWRMLKGNRNANDPFGWFAAFFEWGALYILA-KDKDGFLSKEDIRGVY 164 (174)
T ss_pred cccCCcCCHHHHHHHHHHhCCCCCCCcCHHHHHHHHHhccccCCcchhhhhhhHHHHHHHHH-cCcCCcEeHHHHhhhc
Confidence 1344556667777777666666777777777665432211 122344444443 44 7777777776554
No 110
>KOG1029|consensus
Probab=95.05 E-value=0.21 Score=53.24 Aligned_cols=58 Identities=16% Similarity=0.191 Sum_probs=45.8
Q ss_pred HHHHHHhhhCC-CCCcCHHHHhccCC-cchHHHHHHhcCCCCCCCCCCCCccHHHHHHHhh
Q psy12562 536 VIDSFRILAGD-KPYILPDELRRELP-PDQAEYCIQRMPPYKGPNAIPGALDYQSFSTALY 594 (599)
Q Consensus 536 ~~~~F~~~D~d-~G~it~~el~~~l~-~~~~~~~~~~~~~~~d~~~~dg~i~~~eF~~~~~ 594 (599)
.+..|..+|+. +||+|-..=+.+|- .......+..+-...|.|| ||.++-+||+-.|+
T Consensus 197 Y~QlFNa~DktrsG~Lsg~qaR~aL~qS~Lpq~~LA~IW~LsDvd~-DGkL~~dEfilam~ 256 (1118)
T KOG1029|consen 197 YRQLFNALDKTRSGYLSGQQARSALGQSGLPQNQLAHIWTLSDVDG-DGKLSADEFILAMH 256 (1118)
T ss_pred HHHHhhhcccccccccccHHHHHHHHhcCCchhhHhhheeeeccCC-CCcccHHHHHHHHH
Confidence 56689999999 99999999888772 2233333556666678999 99999999999886
No 111
>KOG4666|consensus
Probab=94.88 E-value=0.05 Score=51.82 Aligned_cols=97 Identities=16% Similarity=0.143 Sum_probs=76.2
Q ss_pred HHHHHHHHhhcCCCCCCcCHHHHHHHHHHc-CCCCCCCCCCHHHHHHHHHHhCCCCCCccchHHHHHHHhhhcCCCCCHH
Q psy12562 456 NEFRASFNHFDKNRTGRLAPEEFKSCLVSL-GYSIGKDRQGEIDFQRILAVVDPNSTGYVHFDAFLDFMTRESTDTDTAE 534 (599)
Q Consensus 456 ~~~~~~F~~~d~~~~g~l~~~e~~~~l~~~-g~~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~ 534 (599)
..+...|..||.+++|.++..+-...+..+ |-+. +...++-.|+.|+.+.||.+.-.+|-.++...+.-. .=
T Consensus 259 d~l~~~f~LFde~~tg~~D~re~v~~lavlc~p~~-----t~~iiq~afk~f~v~eDg~~ge~~ls~ilq~~lgv~--~l 331 (412)
T KOG4666|consen 259 DKLAPTFMLFDEGTTGNGDYRETVKTLAVLCGPPV-----TPVIIQYAFKRFSVAEDGISGEHILSLILQVVLGVE--VL 331 (412)
T ss_pred hhhhhhhheecCCCCCcccHHHHhhhheeeeCCCC-----cHHHHHHHHHhcccccccccchHHHHHHHHHhcCcc--ee
Confidence 668899999999999999877766555444 3334 677788899999999999999988888876543221 12
Q ss_pred HHHHHHHhhhCC-CCCcCHHHHhccC
Q psy12562 535 QVIDSFRILAGD-KPYILPDELRREL 559 (599)
Q Consensus 535 ~~~~~F~~~D~d-~G~it~~el~~~l 559 (599)
.+-..|..++.. +|+|+..+|+.+.
T Consensus 332 ~v~~lf~~i~q~d~~ki~~~~f~~fa 357 (412)
T KOG4666|consen 332 RVPVLFPSIEQKDDPKIYASNFRKFA 357 (412)
T ss_pred eccccchhhhcccCcceeHHHHHHHH
Confidence 456689999988 9999999999875
No 112
>KOG0994|consensus
Probab=94.83 E-value=9.1 Score=43.43 Aligned_cols=83 Identities=20% Similarity=0.286 Sum_probs=44.6
Q ss_pred CCCCCHHHHHHHHHHHHhhhhccCCch------HHHHHHHHHHHHHhHHhHHhcCCCC-----CCCCCCCchhHHHHHHH
Q psy12562 8 QTDNSLSGVQKKLEEYRTYRRKHKPPR------VEQKAKLETNFNTLQTKLRLSNRPA-----YMPTEGKMVSDIANAWK 76 (599)
Q Consensus 8 ~~~~~~~~v~~~l~~~~~~~~~~~~~~------~~~~~~le~~l~~~~~~l~~~~~~~-----~~~~~~~~~~~l~~~w~ 76 (599)
.|..++..++..|+.++......-+.. ......|..+|.....+|....... -.+..+..++.|++...
T Consensus 1198 ay~s~f~~me~kl~~ir~il~~~svs~~~i~~l~~~~~~lr~~l~~~~e~L~~~E~~Lsdi~~~~~~a~~~LesLq~~~~ 1277 (1758)
T KOG0994|consen 1198 AYASRFLDMEEKLEEIRAILSAPSVSAEDIAQLASATESLRRQLQALTEDLPQEEETLSDITNSLPLAGKDLESLQREFN 1277 (1758)
T ss_pred hhHhHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccchhhhhHHHHHHHHH
Confidence 466788889999998888775433311 1222233333433333333332111 13344555666777777
Q ss_pred HHHHhHHHHHHHHH
Q psy12562 77 GLETSEKSFEEWLL 90 (599)
Q Consensus 77 ~L~~~~~~r~~~L~ 90 (599)
.|..+..+..+.+.
T Consensus 1278 ~l~~~~keL~e~~~ 1291 (1758)
T KOG0994|consen 1278 GLLTTYKELREQLE 1291 (1758)
T ss_pred HHHHHHHHHHHHHH
Confidence 77777655544443
No 113
>KOG4065|consensus
Probab=94.71 E-value=0.042 Score=43.71 Aligned_cols=72 Identities=22% Similarity=0.280 Sum_probs=49.3
Q ss_pred CCCHHHHHHHHHHHHhhcCCCCCCcCHHHHHHHHHHc------CC-CC--CCCCCCHHHHHHHHHHhCCCCCCccchHHH
Q psy12562 449 GITQEQLNEFRASFNHFDKNRTGRLAPEEFKSCLVSL------GY-SI--GKDRQGEIDFQRILAVVDPNSTGYVHFDAF 519 (599)
Q Consensus 449 ~~~~~~~~~~~~~F~~~d~~~~g~l~~~e~~~~l~~~------g~-~~--~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF 519 (599)
.+|+++++ -..|...|-|++|.|+--|+..+++-. |. ++ +.+.+.+..++.+++.-|.|+||.|+|.||
T Consensus 62 ~mtpeqlq--fHYF~MHDldknn~lDGiEl~kAiTH~H~~h~~ghep~Pl~sE~Ele~~iD~vL~DdDfN~DG~IDYgEf 139 (144)
T KOG4065|consen 62 KMTPEQLQ--FHYFSMHDLDKNNFLDGIELLKAITHTHDAHDSGHEPVPLSSEAELERLIDAVLDDDDFNGDGVIDYGEF 139 (144)
T ss_pred hCCHHHHh--hhhhhhhccCcCCcchHHHHHHHHHHHhhhhhcCCCCCCCCCHHHHHHHHHHHhcccccCCCceeeHHHH
Confidence 45666543 457888999999999999998888643 32 11 111223344455566667899999999999
Q ss_pred HHH
Q psy12562 520 LDF 522 (599)
Q Consensus 520 ~~~ 522 (599)
+..
T Consensus 140 lK~ 142 (144)
T KOG4065|consen 140 LKR 142 (144)
T ss_pred Hhh
Confidence 864
No 114
>smart00054 EFh EF-hand, calcium binding motif. EF-hands are calcium-binding motifs that occur at least in pairs. Links between disease states and genes encoding EF-hands, particularly the S100 subclass, are emerging. Each motif consists of a 12 residue loop flanked on either side by a 12 residue alpha-helix. EF-hands undergo a conformational change unpon binding calcium ions.
Probab=94.55 E-value=0.045 Score=31.83 Aligned_cols=26 Identities=19% Similarity=0.581 Sum_probs=20.4
Q ss_pred HHHHHHHhCCCCCCccchHHHHHHHh
Q psy12562 499 FQRILAVVDPNSTGYVHFDAFLDFMT 524 (599)
Q Consensus 499 ~~~~~~~~d~~~~g~I~~~eF~~~~~ 524 (599)
+..+|..+|.+++|.|++.+|..++.
T Consensus 2 ~~~~f~~~d~~~~g~i~~~e~~~~~~ 27 (29)
T smart00054 2 LKEAFRLFDKDGDGKIDFEEFKDLLK 27 (29)
T ss_pred HHHHHHHHCCCCCCcEeHHHHHHHHH
Confidence 45678888888888888888887764
No 115
>smart00054 EFh EF-hand, calcium binding motif. EF-hands are calcium-binding motifs that occur at least in pairs. Links between disease states and genes encoding EF-hands, particularly the S100 subclass, are emerging. Each motif consists of a 12 residue loop flanked on either side by a 12 residue alpha-helix. EF-hands undergo a conformational change unpon binding calcium ions.
Probab=94.54 E-value=0.042 Score=31.96 Aligned_cols=27 Identities=37% Similarity=0.680 Sum_probs=24.4
Q ss_pred HHHHHHhhcCCCCCCcCHHHHHHHHHH
Q psy12562 458 FRASFNHFDKNRTGRLAPEEFKSCLVS 484 (599)
Q Consensus 458 ~~~~F~~~d~~~~g~l~~~e~~~~l~~ 484 (599)
+..+|..+|.+++|.|+..+|..+++.
T Consensus 2 ~~~~f~~~d~~~~g~i~~~e~~~~~~~ 28 (29)
T smart00054 2 LKEAFRLFDKDGDGKIDFEEFKDLLKA 28 (29)
T ss_pred HHHHHHHHCCCCCCcEeHHHHHHHHHh
Confidence 577999999999999999999998865
No 116
>COG5069 SAC6 Ca2+-binding actin-bundling protein fimbrin/plastin (EF-Hand superfamily) [Cytoskeleton]
Probab=93.83 E-value=3.2 Score=42.20 Aligned_cols=123 Identities=24% Similarity=0.189 Sum_probs=77.4
Q ss_pred HHHHHHHHHhhcCCCCCCcCHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhCCCCCC-ccchHHHHHHHhhhcCCCCCH
Q psy12562 455 LNEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPNSTG-YVHFDAFLDFMTRESTDTDTA 533 (599)
Q Consensus 455 ~~~~~~~F~~~d~~~~g~l~~~e~~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g-~I~~~eF~~~~~~~~~~~~~~ 533 (599)
++....+|.++-+.+...++..+|..|+.++|... ...+- +-...|++++. .+.|..|+..+...+ ...
T Consensus 484 l~~~t~~f~h~lkk~~~~lsdsd~~a~l~slgl~~-----dk~eg--i~~F~~~a~s~~gv~yl~v~~~i~sel---~D~ 553 (612)
T COG5069 484 LRSNTALFNHVLKKDGCGLSDSDLCAWLGSLGLKG-----DKEEG--IRSFGDPAGSVSGVFYLDVLKGIHSEL---VDY 553 (612)
T ss_pred HHHHHHHHHHHHhcCCCCCCHHHHHHHHHHhcccc-----CCccc--eeeccCCccccccchHHHHHHHHhhhh---cCh
Confidence 35567788888777777799999999999998766 22111 22222444443 467777777665433 445
Q ss_pred HHHHHHHHhhhCC-CCC---cCHHHHhccCCcchHHHHHHhcCCCCCCCCCCCCccHHHHHHHhhc
Q psy12562 534 EQVIDSFRILAGD-KPY---ILPDELRRELPPDQAEYCIQRMPPYKGPNAIPGALDYQSFSTALYG 595 (599)
Q Consensus 534 ~~~~~~F~~~D~d-~G~---it~~el~~~l~~~~~~~~~~~~~~~~d~~~~dg~i~~~eF~~~~~~ 595 (599)
+.+..+|..++.- ++. |+-+-++... .++.-+++ +.++..-.++|--|+..++.
T Consensus 554 d~v~~~~~~f~diad~rsl~is~~ilRs~~------aii~~lpe--~in~~r~~Ldvltfi~slma 611 (612)
T COG5069 554 DLVTRGFTEFDDIADARSLAISSKILRSLG------AIIKFLPE--DINGVRPRLDVLTFIESLMA 611 (612)
T ss_pred hhhhhhHHHHHHhhhhhhhhccHHHHHHhh------hHheechh--hhcccCccchHHHHHHHHhc
Confidence 7788888888754 554 5544555332 22333333 33444567999999988764
No 117
>KOG0046|consensus
Probab=93.45 E-value=0.083 Score=53.76 Aligned_cols=59 Identities=20% Similarity=0.290 Sum_probs=36.4
Q ss_pred HHHHHHHhhhCC-CCCcCHHHHhccC------CcchHHHHHHhcCCCCCCCCCCCCccHHHHHHHhhc
Q psy12562 535 QVIDSFRILAGD-KPYILPDELRREL------PPDQAEYCIQRMPPYKGPNAIPGALDYQSFSTALYG 595 (599)
Q Consensus 535 ~~~~~F~~~D~d-~G~it~~el~~~l------~~~~~~~~~~~~~~~~d~~~~dg~i~~~eF~~~~~~ 595 (599)
.+...|...| + +|+||..++..++ +-....+.+++++...++|. +|.|+|++|+..+++
T Consensus 20 ~l~~kF~~~d-~~~G~v~~~~l~~~f~k~~~~~g~~~~eei~~~l~~~~~~~-~g~v~fe~f~~~~~~ 85 (627)
T KOG0046|consen 20 ELKEKFNKLD-DQKGYVTVYELPDAFKKAKLPLGYFVREEIKEILGEVGVDA-DGRVEFEEFVGIFLN 85 (627)
T ss_pred HHHHHHHhhc-CCCCeeehHHhHHHHHHhcccccchhHHHHHHHHhccCCCc-CCccCHHHHHHHHHh
Confidence 4566677777 5 7777777776655 11233344445555556666 777788877776554
No 118
>KOG4240|consensus
Probab=93.38 E-value=2.9 Score=47.11 Aligned_cols=143 Identities=13% Similarity=0.167 Sum_probs=104.5
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhHHHhhHH-HHhhcHHHHH
Q psy12562 174 HDSVSVNARCQRICDQWDHLGALTQQRRHALDEAEKILEKIDILHLEFAKRAAPFNNWLDGTREDLVDM-FIVHTMEEIQ 252 (599)
Q Consensus 174 ~~~~~i~~~~~~l~~rw~~L~~~~~~R~~~L~~~~~~~q~~~~~~~~f~~~~~~l~~Wl~~~~~~l~~~-~~~~~~~~v~ 252 (599)
+....|++-+..+..+-..+.-..+.+..++..+..... ...+.+++..|+.+-...|..- ..+++.....
T Consensus 241 ~mve~vQ~~le~l~~~~q~~El~~d~~s~rl~~a~~l~~--------l~~~k~qv~~~~rng~smLt~~~~~~s~~~et~ 312 (1025)
T KOG4240|consen 241 DMVEAVQGLLESLEEEVQRLELPADVRSTRLEQASQLAK--------LLEDKNQVLALIRNGLSMLTQLRVLASDLSETS 312 (1025)
T ss_pred HHHHHHHHHHHhHHHHHHhhcchhhchhhHHHHHHHHHH--------HHHHHHHHHHHHhcchhhhhhhccCCCcCCccH
Confidence 455678888888888888888888888888888877777 8899999999999998777654 5677888888
Q ss_pred HHHHHhHHHHhhHHHHHHHHhHHHHHHHHHHHHHHhhcCCCCCCCCCCCCChHHHHHHHHHHHHhhHhHhHHHHHHHH
Q psy12562 253 GLIDAHSQFKATLGEADKEYNSIVNLVREVESTVQQYQIPGGLENPYTALTANDLTKKWTDVRKLVPQRDTTLQAELR 330 (599)
Q Consensus 253 ~ll~~h~~l~~el~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~w~~L~~~~~~R~~~L~~~l~ 330 (599)
.+..+|..|..-.+. ..+..-.+..+....+....++ .....-..+..++.+|.+|...++.|-.++..+..
T Consensus 313 ~Lq~~~~~f~d~~e~--k~~~~q~~~~~~a~~~~~~~h~----~~~e~~~~le~~~t~~qql~~~~e~r~~~vaa~~~ 384 (1025)
T KOG4240|consen 313 QLQREHRQFQDAQEV--KTLLSQLQVQQKAFDLLQNKHQ----NRDESLEKLETLQTKWQQLMTAMEDRLKLVAAAVA 384 (1025)
T ss_pred HHHhhHhhhhhHHHH--HHHHHHHHHHHHHHHHHhchhh----hHHHHHHhHHHHhhhHHHHHHHHHHHHHHHHHHHH
Confidence 889999999865544 1112222223333223332221 23334457889999999999999999999999877
No 119
>PF12763 EF-hand_4: Cytoskeletal-regulatory complex EF hand; PDB: 2QPT_A 2KSP_A 2KFG_A 2JQ6_A 2KFH_A 2KFF_A 1IQ3_A 3FIA_A 2KHN_A 2KGR_A ....
Probab=93.34 E-value=0.14 Score=41.34 Aligned_cols=60 Identities=13% Similarity=0.243 Sum_probs=47.9
Q ss_pred HHHHHHHHHHhCCCCCCccchHHHHHHHhhhcCCCCCHHHHHHHHHhhhCC-CCCcCHHHHhccC
Q psy12562 496 EIDFQRILAVVDPNSTGYVHFDAFLDFMTRESTDTDTAEQVIDSFRILAGD-KPYILPDELRREL 559 (599)
Q Consensus 496 ~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~~F~~~D~d-~G~it~~el~~~l 559 (599)
......+|...++ ++|.|+-+.-..++.. ...+.+.+..+|...|.+ +|+++.+||.-+|
T Consensus 9 ~~~y~~~F~~l~~-~~g~isg~~a~~~f~~---S~L~~~~L~~IW~LaD~~~dG~L~~~EF~iAm 69 (104)
T PF12763_consen 9 KQKYDQIFQSLDP-QDGKISGDQAREFFMK---SGLPRDVLAQIWNLADIDNDGKLDFEEFAIAM 69 (104)
T ss_dssp HHHHHHHHHCTSS-STTEEEHHHHHHHHHH---TTSSHHHHHHHHHHH-SSSSSEEEHHHHHHHH
T ss_pred HHHHHHHHHhcCC-CCCeEeHHHHHHHHHH---cCCCHHHHHHHHhhhcCCCCCcCCHHHHHHHH
Confidence 4456678888874 6799999999887754 355678999999999999 9999999997654
No 120
>KOG1707|consensus
Probab=92.47 E-value=0.56 Score=49.04 Aligned_cols=138 Identities=14% Similarity=0.212 Sum_probs=82.5
Q ss_pred CCCHHHHHHHHHHHHhhcCCCCCCcCHHHHHHHH-HHcCCCCCCCCCCHHHHH---HHHHHhCCCC--CCccchHHHHHH
Q psy12562 449 GITQEQLNEFRASFNHFDKNRTGRLAPEEFKSCL-VSLGYSIGKDRQGEIDFQ---RILAVVDPNS--TGYVHFDAFLDF 522 (599)
Q Consensus 449 ~~~~~~~~~~~~~F~~~d~~~~g~l~~~e~~~~l-~~~g~~~~~~~~~~~~~~---~~~~~~d~~~--~g~I~~~eF~~~ 522 (599)
.+.+..+..+..+|...|.|+||.++-.|+...= ...+.++ ...++. ......-++| ++.++..-|+.+
T Consensus 188 elkp~~v~al~RIFki~D~d~D~~Lsd~Eln~fQ~~CF~~pl-----~p~~l~~vk~vv~e~~p~gv~~~~ltl~GFLfL 262 (625)
T KOG1707|consen 188 ELKPRCVKALKRIFKISDSDNDGALSDAELNDFQKKCFNTPL-----DPQELEDVKNVVQEICPDGVYERGLTLPGFLFL 262 (625)
T ss_pred cccHHHHHHHHHHHhhhccccccccchhhhhHHHHHhcCCCC-----CHHHHHHHHHHHHhhcCchhhhccccccchHHH
Confidence 4556667889999999999999999998887654 3345555 433343 3333333332 344666666654
Q ss_pred HhhhcCC-------------CC----------------------------CHHHHHHHHHhhhCC-CCCcCHHHHhccCC
Q psy12562 523 MTRESTD-------------TD----------------------------TAEQVIDSFRILAGD-KPYILPDELRRELP 560 (599)
Q Consensus 523 ~~~~~~~-------------~~----------------------------~~~~~~~~F~~~D~d-~G~it~~el~~~l~ 560 (599)
-..+... +. -.+=+...|..||.| ||-++..||..+++
T Consensus 263 ~~lfiergr~EttW~iLR~fgY~DsleL~~~~l~p~~~~~p~~s~ELs~~~~~Fl~~~f~~~D~d~Dg~L~p~El~~LF~ 342 (625)
T KOG1707|consen 263 NTLFIERGRHETTWTILRKFGYTDSLELTDEYLPPRLKVPPDQSVELSPKGYRFLVDVFEKFDRDNDGALSPEELKDLFS 342 (625)
T ss_pred HHHHHHhccccchhhhhhhcCCcchhhhhhhhcCccccCCCCcceeccHHHHHHHHHHHHhccCCCCCCcCHHHHHHHhh
Confidence 3221100 00 012367789999999 99999999998872
Q ss_pred --cchHHHHHHhc-CCCCCCCCCCCCccHHHHHHHhh
Q psy12562 561 --PDQAEYCIQRM-PPYKGPNAIPGALDYQSFSTALY 594 (599)
Q Consensus 561 --~~~~~~~~~~~-~~~~d~~~~dg~i~~~eF~~~~~ 594 (599)
|.-. ..... ......+. .|.++|+-|+..+.
T Consensus 343 ~~P~~p--W~~~~~~~~t~~~~-~G~ltl~g~l~~Ws 376 (625)
T KOG1707|consen 343 TAPGSP--WTSSPYKDSTVKNE-RGWLTLNGFLSQWS 376 (625)
T ss_pred hCCCCC--CCCCcccccceecc-cceeehhhHHHHHH
Confidence 1000 00000 00011112 79999999998764
No 121
>PF09279 EF-hand_like: Phosphoinositide-specific phospholipase C, efhand-like; InterPro: IPR015359 This domain is predominantly found in the enzyme phosphoinositol-specific phospholipase C. It adopts a structure consisting of a core of four alpha helices, in an EF like fold, and is required for functioning of the enzyme []. ; PDB: 3OHM_B 3QR0_A 2ZKM_X 2FJU_B 3QR1_D 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B ....
Probab=92.40 E-value=0.23 Score=38.43 Aligned_cols=64 Identities=17% Similarity=0.432 Sum_probs=51.7
Q ss_pred HHHHHHHhhcCCCCCCcCHHHHHHHHHHc-CC-CCCCCCCCHHHHHHHHHHhCCC----CCCccchHHHHHHHhhh
Q psy12562 457 EFRASFNHFDKNRTGRLAPEEFKSCLVSL-GY-SIGKDRQGEIDFQRILAVVDPN----STGYVHFDAFLDFMTRE 526 (599)
Q Consensus 457 ~~~~~F~~~d~~~~g~l~~~e~~~~l~~~-g~-~~~~~~~~~~~~~~~~~~~d~~----~~g~I~~~eF~~~~~~~ 526 (599)
++..+|..+.. +.+.|+.++|...|+.- |. .. +...+..++..+.++ ..+.++++.|..++...
T Consensus 1 ei~~if~~ys~-~~~~mt~~~f~~FL~~eQ~~~~~-----~~~~~~~li~~~~~~~~~~~~~~lt~~gF~~fL~S~ 70 (83)
T PF09279_consen 1 EIEEIFRKYSS-DKEYMTAEEFRRFLREEQGEPRL-----TDEQAKELIEKFEPDERNRQKGQLTLEGFTRFLFSD 70 (83)
T ss_dssp HHHHHHHHHCT-TSSSEEHHHHHHHHHHTSS-TTS-----SHHHHHHHHHHHHHHHHHHCTTEEEHHHHHHHHHST
T ss_pred CHHHHHHHHhC-CCCcCCHHHHHHHHHHHhccccC-----cHHHHHHHHHHHccchhhcccCCcCHHHHHHHHCCC
Confidence 36789999965 78999999999999754 44 34 789999999988654 46899999999999753
No 122
>KOG0161|consensus
Probab=92.23 E-value=37 Score=42.05 Aligned_cols=93 Identities=17% Similarity=0.230 Sum_probs=46.7
Q ss_pred HHHHHHHHHHHhhHhHhHHHHHHHHhhcchHHHHHHHHHHhchhhhhHHHHHHHHhhhhccCCCCHHHHHHHHHHHHhhh
Q psy12562 306 DLTKKWTDVRKLVPQRDTTLQAELRKQQNNETLRRQFAEKANQVGPWIERQMDAVTSIGMGLQGSLEDQLHRLKEYEQGV 385 (599)
Q Consensus 306 ~l~~~w~~L~~~~~~R~~~L~~~l~~~~~~~~l~~~f~~~~~~~~~Wl~e~~~~l~~~~~~~~~~~e~~~~~~~~~~~ei 385 (599)
.+...-.++..-+...+..+++... ....+..+......++..|....+..+....-.....-..+..++++.+..+
T Consensus 1319 ~l~~~l~~l~~e~~~l~e~leee~e---~~~~l~r~lsk~~~e~~~~~~k~e~~~~~~~eelee~kk~l~~~lq~~qe~~ 1395 (1930)
T KOG0161|consen 1319 ALENALRQLEHELDLLREQLEEEQE---AKNELERKLSKANAELAQWKKKFEEEVLQRLEELEELKKKLQQRLQELEEQI 1395 (1930)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHH
Confidence 4444555555556666666666554 3344555566666777778777766554211011111122233445555555
Q ss_pred hccccchHHHHHHHHH
Q psy12562 386 YAYKPHIEELEKIHQA 401 (599)
Q Consensus 386 ~~~~~~~~~l~~~~~~ 401 (599)
.........+...-..
T Consensus 1396 e~~~~~~~~Lek~k~~ 1411 (1930)
T KOG0161|consen 1396 EAANAKNASLEKAKNR 1411 (1930)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 5444444445444333
No 123
>PLN02952 phosphoinositide phospholipase C
Probab=92.05 E-value=0.42 Score=51.16 Aligned_cols=86 Identities=19% Similarity=0.228 Sum_probs=60.8
Q ss_pred CCCccchHHHHHHHhhhc-CCCCCHHHHHHHHHhhhCCCCCcCHHHHhccCC---------cchHHHHHHhcCCCCC---
Q psy12562 510 STGYVHFDAFLDFMTRES-TDTDTAEQVIDSFRILAGDKPYILPDELRRELP---------PDQAEYCIQRMPPYKG--- 576 (599)
Q Consensus 510 ~~g~I~~~eF~~~~~~~~-~~~~~~~~~~~~F~~~D~d~G~it~~el~~~l~---------~~~~~~~~~~~~~~~d--- 576 (599)
+.|.++|.+|..+...+. .....+.++..+|..|..+.+.+|.++|..+|. .+.+..++..++....
T Consensus 13 ~~g~l~f~~f~~f~~~~k~~~~~~r~ei~~lf~~~~~~~~~mt~~~l~~FL~~~Q~e~~~~~~~~~~i~~~~~~~~~~~~ 92 (599)
T PLN02952 13 DSGSYNYKMFNLFNRKFKITEAEPPDDVKDVFCKFSVGGGHMGADQLRRFLVLHQDELDCTLAEAQRIVEEVINRRHHVT 92 (599)
T ss_pred cCCCcCHHHHHHHHHHhccccCCChHHHHHHHHHHhCCCCccCHHHHHHHHHHhCCCcCCCHHHHHHHHHHHHhhccccc
Confidence 458999999988776542 233467899999999987777899999999983 2334455554432211
Q ss_pred CCCCCCCccHHHHHHHhhcC
Q psy12562 577 PNAIPGALDYQSFSTALYGE 596 (599)
Q Consensus 577 ~~~~dg~i~~~eF~~~~~~~ 596 (599)
..+ .+.++++.|...|+..
T Consensus 93 ~~~-~~~l~~~~F~~~l~s~ 111 (599)
T PLN02952 93 RYT-RHGLNLDDFFHFLLYD 111 (599)
T ss_pred ccc-ccCcCHHHHHHHHcCc
Confidence 112 4569999999999864
No 124
>KOG1265|consensus
Probab=91.81 E-value=0.81 Score=49.85 Aligned_cols=78 Identities=21% Similarity=0.437 Sum_probs=57.8
Q ss_pred cchHHHHHHHhhhcCCCCCHHHHHHHHHhhhCC-CCCcCHHHHhccC-----------------CcchHHHHHHhcCCCC
Q psy12562 514 VHFDAFLDFMTRESTDTDTAEQVIDSFRILAGD-KPYILPDELRREL-----------------PPDQAEYCIQRMPPYK 575 (599)
Q Consensus 514 I~~~eF~~~~~~~~~~~~~~~~~~~~F~~~D~d-~G~it~~el~~~l-----------------~~~~~~~~~~~~~~~~ 575 (599)
.+|+-|..++..+ ..+.++..+|..+..+ ..|+|.++|..+| .+..+..++...-...
T Consensus 205 f~~e~f~~~l~kl----cpR~eie~iF~ki~~~~kpylT~~ql~dfln~~QrDpRLNeilfp~~~~~r~~~liekyEp~~ 280 (1189)
T KOG1265|consen 205 FTLEKFYRLLNKL----CPRPEIEEIFRKISGKKKPYLTKEQLVDFLNKKQRDPRLNEILFPPADPRRIQSLIEKYEPNS 280 (1189)
T ss_pred ccHHHHHHHHHhc----CCchhHHHHHHHhccCCCccccHHHHHHHHhhhccCcchhhhhcCCCCHHHHHHHHHHcCCch
Confidence 5566666666653 3347899999999999 8999999999987 2455666666654333
Q ss_pred CCCCCCCCccHHHHHHHhhcC
Q psy12562 576 GPNAIPGALDYQSFSTALYGE 596 (599)
Q Consensus 576 d~~~~dg~i~~~eF~~~~~~~ 596 (599)
+.. ..|+++-+.|+..+++.
T Consensus 281 ~~a-~~gqms~dgf~ryl~gd 300 (1189)
T KOG1265|consen 281 DNA-EKGQMSTDGFVRYLMGD 300 (1189)
T ss_pred hhh-hccccchhhhHHHhhCC
Confidence 322 38999999999999984
No 125
>PF14788 EF-hand_10: EF hand; PDB: 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B 1DJZ_B 1DJY_B 1DJX_B 1QAT_A 1DJH_A ....
Probab=91.51 E-value=0.32 Score=33.05 Aligned_cols=44 Identities=9% Similarity=0.037 Sum_probs=30.9
Q ss_pred cchHHHHHHHhhhcCCCCCHHHHHHHHHhhhCC-CCCcCHHHHhcc
Q psy12562 514 VHFDAFLDFMTRESTDTDTAEQVIDSFRILAGD-KPYILPDELRRE 558 (599)
Q Consensus 514 I~~~eF~~~~~~~~~~~~~~~~~~~~F~~~D~d-~G~it~~el~~~ 558 (599)
++|.|...++.. +.-..+.+-...+|+.+|++ +|++..+||..+
T Consensus 2 msf~Evk~lLk~-~NI~~~~~yA~~LFq~~D~s~~g~Le~~Ef~~F 46 (51)
T PF14788_consen 2 MSFKEVKKLLKM-MNIEMDDEYARQLFQECDKSQSGRLEGEEFEEF 46 (51)
T ss_dssp BEHHHHHHHHHH-TT----HHHHHHHHHHH-SSSSSEBEHHHHHHH
T ss_pred CCHHHHHHHHHH-HccCcCHHHHHHHHHHhcccCCCCccHHHHHHH
Confidence 677787777654 33344556788899999999 999999999764
No 126
>KOG1955|consensus
Probab=89.38 E-value=0.94 Score=45.91 Aligned_cols=70 Identities=16% Similarity=0.215 Sum_probs=61.4
Q ss_pred CCCHHHHHHHHHHHHhhcCCCCCCcCHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhCCCCCCccchHHHHHHHhh
Q psy12562 449 GITQEQLNEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPNSTGYVHFDAFLDFMTR 525 (599)
Q Consensus 449 ~~~~~~~~~~~~~F~~~d~~~~g~l~~~e~~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~ 525 (599)
.|++|+.+-...-|+.+.+|..|.|+-.--+.++...... ..++..|+...|.+.||-+++.|||..|.-
T Consensus 224 ~IT~EQReYYvnQFrtvQpDp~gfisGsaAknFFtKSklp-------i~ELshIWeLsD~d~DGALtL~EFcAAfHL 293 (737)
T KOG1955|consen 224 QITPEQREYYVNQFRTVQPDPHGFISGSAAKNFFTKSKLP-------IEELSHIWELSDVDRDGALTLSEFCAAFHL 293 (737)
T ss_pred ccCHHHHHHHHhhhhcccCCcccccccHHHHhhhhhccCc-------hHHHHHHHhhcccCccccccHHHHHhhHhh
Confidence 6889999889999999999999999999888888765544 467889999999999999999999998853
No 127
>PF09279 EF-hand_like: Phosphoinositide-specific phospholipase C, efhand-like; InterPro: IPR015359 This domain is predominantly found in the enzyme phosphoinositol-specific phospholipase C. It adopts a structure consisting of a core of four alpha helices, in an EF like fold, and is required for functioning of the enzyme []. ; PDB: 3OHM_B 3QR0_A 2ZKM_X 2FJU_B 3QR1_D 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B ....
Probab=88.99 E-value=0.52 Score=36.38 Aligned_cols=61 Identities=20% Similarity=0.293 Sum_probs=41.5
Q ss_pred HHHHHHHHhCCCCCCccchHHHHHHHhhhcCC-CCCHHHHHHHHHhhhCC-----CCCcCHHHHhccC
Q psy12562 498 DFQRILAVVDPNSTGYVHFDAFLDFMTRESTD-TDTAEQVIDSFRILAGD-----KPYILPDELRREL 559 (599)
Q Consensus 498 ~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~-~~~~~~~~~~F~~~D~d-----~G~it~~el~~~l 559 (599)
++..+|..+.. +.+.|+.++|..++...-.. ..+.+.+..++..|.++ .|.+|.+.|..+|
T Consensus 1 ei~~if~~ys~-~~~~mt~~~f~~FL~~eQ~~~~~~~~~~~~li~~~~~~~~~~~~~~lt~~gF~~fL 67 (83)
T PF09279_consen 1 EIEEIFRKYSS-DKEYMTAEEFRRFLREEQGEPRLTDEQAKELIEKFEPDERNRQKGQLTLEGFTRFL 67 (83)
T ss_dssp HHHHHHHHHCT-TSSSEEHHHHHHHHHHTSS-TTSSHHHHHHHHHHHHHHHHHHCTTEEEHHHHHHHH
T ss_pred CHHHHHHHHhC-CCCcCCHHHHHHHHHHHhccccCcHHHHHHHHHHHccchhhcccCCcCHHHHHHHH
Confidence 46778888865 67889999999999764433 24567777777777432 4566666666554
No 128
>PRK04863 mukB cell division protein MukB; Provisional
Probab=88.67 E-value=67 Score=39.24 Aligned_cols=127 Identities=8% Similarity=0.071 Sum_probs=60.2
Q ss_pred hcHHHHHHHHHHhHHHHhhHHHHHHHHhHHHHHHHHHHHHHHhhcCCCCCCCCCCCCChHHHHHHHHHHHHhhHhHhHHH
Q psy12562 246 HTMEEIQGLIDAHSQFKATLGEADKEYNSIVNLVREVESTVQQYQIPGGLENPYTALTANDLTKKWTDVRKLVPQRDTTL 325 (599)
Q Consensus 246 ~~~~~v~~ll~~h~~l~~el~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~w~~L~~~~~~R~~~L 325 (599)
.|+.....+...++..+.........+-.+..+.+.-..+........- .....-...|..++..+...-..-+..+
T Consensus 932 ~Dp~~~e~lr~e~~~~~~~~~~~~~~~~~l~~~~~~~~~~~y~~~~~~l---~~~~~~~~~Le~~Le~iE~~~~~areql 1008 (1486)
T PRK04863 932 SDPEQFEQLKQDYQQAQQTQRDAKQQAFALTEVVQRRAHFSYEDAAEML---AKNSDLNEKLRQRLEQAEQERTRAREQL 1008 (1486)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHhHh---hcchhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 3444555555555555555555555555555444443333221110000 0111123455555555554444444444
Q ss_pred HHHHHhhcchHHHHHHHHHHhchhhhhHHHHHHHHhhhhccCCCCHHHHH
Q psy12562 326 QAELRKQQNNETLRRQFAEKANQVGPWIERQMDAVTSIGMGLQGSLEDQL 375 (599)
Q Consensus 326 ~~~l~~~~~~~~l~~~f~~~~~~~~~Wl~e~~~~l~~~~~~~~~~~e~~~ 375 (599)
+++-......+...............=+.+.+..|....++.+.+++...
T Consensus 1009 ~qaq~q~~q~~q~l~slksslq~~~e~L~E~eqe~~~~g~~~~~~~~~~~ 1058 (1486)
T PRK04863 1009 RQAQAQLAQYNQVLASLKSSYDAKRQMLQELKQELQDLGVPADSGAEERA 1058 (1486)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCccHHHHH
Confidence 44444322233344445555566666666777777766655555555443
No 129
>PF08580 KAR9: Yeast cortical protein KAR9; InterPro: IPR013889 The KAR9 protein in Saccharomyces cerevisiae (Baker's yeast) is a cytoskeletal protein required for karyogamy, correct positioning of the mitotic spindle and for orientation of cytoplasmic microtubules []. KAR9 localises at the shmoo tip in mating cells and at the tip of the growing bud in anaphase [].
Probab=88.50 E-value=45 Score=37.03 Aligned_cols=112 Identities=9% Similarity=0.045 Sum_probs=56.9
Q ss_pred HHHHHHHhhhhhHHHhcccCCCCCCCHHHHHHHHHHHHHHHHh-HHhhHHHHHHHHHHHHHHhhc-cCC-CchhHHHHHH
Q psy12562 108 HKADIHEDWTRGKEEMLQSSDFRQCKLNELKALKKKHEAFESD-LAAHQDRVEQIAAIAQELNTL-EYH-DSVSVNARCQ 184 (599)
Q Consensus 108 ~~~~~~~~Wl~~~e~~l~~~~~~~~~l~~v~~~l~~h~~~~~e-l~~~~~~v~~l~~~~~~L~~~-~~~-~~~~i~~~~~ 184 (599)
..+.....|+.+....|..- ..+++.|...+.++..+-.. +.+-+ . +... ... ....+.+.+.
T Consensus 36 ~~~~qi~~Wi~k~k~~l~~L---~~~l~~ID~ai~~~l~lIe~~v~~ie----~-------~q~r~di~~~~~dl~e~vs 101 (683)
T PF08580_consen 36 GAAEQILDWIQKAKDVLYGL---REGLEEIDSAISRFLDLIEVYVSAIE----D-------LQLREDIANSLFDLIEEVS 101 (683)
T ss_pred HHHHHHHHHHHHHHHHHHHH---HHhHHHHHHHHHHHHHHHHhhccccc----c-------ccccccccccHHHHHHHHH
Confidence 45556668998888877764 24667777766665544221 11100 0 0000 000 0111112222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhH
Q psy12562 185 RICDQWDHLGALTQQRRHALDEAEKILEKIDILHLEFAKRAAPFNNWLDGTR 236 (599)
Q Consensus 185 ~l~~rw~~L~~~~~~R~~~L~~~~~~~q~~~~~~~~f~~~~~~l~~Wl~~~~ 236 (599)
++.. .|...+..-+..++-++....-...........++++..++-+.+
T Consensus 102 qm~~---~vK~~L~~vK~qveiAmE~~EL~~~vlg~l~~EIe~~~~~vfeme 150 (683)
T PF08580_consen 102 QMEL---DVKKTLISVKKQVEIAMEWEELWNDVLGDLDNEIEECIRLVFEME 150 (683)
T ss_pred HHHH---HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2221 566666666666776666665444455556666666666666654
No 130
>KOG3555|consensus
Probab=88.28 E-value=0.96 Score=43.73 Aligned_cols=97 Identities=9% Similarity=0.027 Sum_probs=64.1
Q ss_pred HHHHHHHHhhcCCCCCCcCHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhCCCCCCccchHHHHHHHhhhcCCCCCHHH
Q psy12562 456 NEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPNSTGYVHFDAFLDFMTRESTDTDTAEQ 535 (599)
Q Consensus 456 ~~~~~~F~~~d~~~~g~l~~~e~~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~ 535 (599)
.+++..|..+-.+.++......+...-..+. .+..+.-...+--||+.+|.|.||.++..|...+... ..+..
T Consensus 211 ~RL~dWF~~lhe~s~~~~~~ss~~~~~~~~d--~s~~p~CKds~gWMFnklD~N~Dl~Ld~sEl~~I~ld-----knE~C 283 (434)
T KOG3555|consen 211 NRLRDWFKALHEDSSQNDKTSSLHSAASGFD--TSILPICKDSLGWMFNKLDTNYDLLLDQSELRAIELD-----KNEAC 283 (434)
T ss_pred HHHHHHHHHHHhhhhccCcchhhcccccccc--cccCcchhhhhhhhhhccccccccccCHHHhhhhhcc-----CchhH
Confidence 4567777776666655555444443322221 1111124566777889999888999988887777654 23457
Q ss_pred HHHHHHhhhCC-CCCcCHHHHhccC
Q psy12562 536 VIDSFRILAGD-KPYILPDELRREL 559 (599)
Q Consensus 536 ~~~~F~~~D~d-~G~it~~el~~~l 559 (599)
++..|...|.. +|.|+..|.=.-+
T Consensus 284 ikpFfnsCD~~kDg~iS~~EWC~CF 308 (434)
T KOG3555|consen 284 IKPFFNSCDTYKDGSISTNEWCYCF 308 (434)
T ss_pred HHHHHhhhcccccCccccchhhhhh
Confidence 88888899988 8999988886655
No 131
>KOG4347|consensus
Probab=87.48 E-value=3 Score=44.23 Aligned_cols=102 Identities=16% Similarity=0.269 Sum_probs=70.3
Q ss_pred ccCCCHHHHHHHHHHHHhh-cCCCCC-------------CcCHHHHHHHHHHc-CCCCCCCCCCHHHHHHHHHHhCCCCC
Q psy12562 447 SKGITQEQLNEFRASFNHF-DKNRTG-------------RLAPEEFKSCLVSL-GYSIGKDRQGEIDFQRILAVVDPNST 511 (599)
Q Consensus 447 ~~~~~~~~~~~~~~~F~~~-d~~~~g-------------~l~~~e~~~~l~~~-g~~~~~~~~~~~~~~~~~~~~d~~~~ 511 (599)
.+.++.++++.+..+|..- -.+..| ++....|..+++.+ .... +......+|+.+|.+++
T Consensus 495 ~~~lt~~dL~~lYd~f~~e~~~~~~~~~~~~p~~~~~eqyi~~~~f~~~f~~l~pw~~-----s~~~~~rlF~l~D~s~~ 569 (671)
T KOG4347|consen 495 TTSLTNTDLENLYDLFKEEHLTNSIGLGRSDPDFEAFEQYIDYAQFLEVFRELLPWAV-----SLIFLERLFRLLDDSMT 569 (671)
T ss_pred cCccCHHHHHHHHHHHHHHHhccCcccCCCCCCchHHHHHHHHhhHHHHhhccCchhH-----HHHHHHHHHHhcccCCc
Confidence 3467888888888888652 112111 12222333333322 1122 56677889999999999
Q ss_pred CccchHHHHHHHhhhcCCCCCHHHHHHHHHhhhCC-CCCcCHHHH
Q psy12562 512 GYVHFDAFLDFMTRESTDTDTAEQVIDSFRILAGD-KPYILPDEL 555 (599)
Q Consensus 512 g~I~~~eF~~~~~~~~~~~~~~~~~~~~F~~~D~d-~G~it~~el 555 (599)
|.++|.+|+..+.... .....+.+.-.|+.+|++ + ..+.++.
T Consensus 570 g~Ltf~~lv~gL~~l~-~~~~~ek~~l~y~lh~~p~~-~~d~e~~ 612 (671)
T KOG4347|consen 570 GLLTFKDLVSGLSILK-AGDALEKLKLLYKLHDPPAD-ELDREEV 612 (671)
T ss_pred ceeEHHHHHHHHHHHH-hhhHHHHHHHHHhhccCCcc-ccccccc
Confidence 9999999999987643 334458899999999999 8 8888888
No 132
>KOG1029|consensus
Probab=86.87 E-value=0.9 Score=48.66 Aligned_cols=65 Identities=26% Similarity=0.413 Sum_probs=54.7
Q ss_pred HHHHHHHHHHHhhcCCCCCCcCHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhCCCCCCccchHHHHHHHh
Q psy12562 453 EQLNEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPNSTGYVHFDAFLDFMT 524 (599)
Q Consensus 453 ~~~~~~~~~F~~~d~~~~g~l~~~e~~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~ 524 (599)
...-+...+|+.+|+..+|+|+-..-+.+|...|.+ ...+-.|+..-|.|+||+++.+||+-.|.
T Consensus 192 ~~klKY~QlFNa~DktrsG~Lsg~qaR~aL~qS~Lp-------q~~LA~IW~LsDvd~DGkL~~dEfilam~ 256 (1118)
T KOG1029|consen 192 HNKLKYRQLFNALDKTRSGYLSGQQARSALGQSGLP-------QNQLAHIWTLSDVDGDGKLSADEFILAMH 256 (1118)
T ss_pred hhhhHHHHHhhhcccccccccccHHHHHHHHhcCCc-------hhhHhhheeeeccCCCCcccHHHHHHHHH
Confidence 344667899999999999999999999888766653 45677899999999999999999988764
No 133
>KOG0161|consensus
Probab=85.73 E-value=1.1e+02 Score=38.37 Aligned_cols=27 Identities=19% Similarity=0.091 Sum_probs=18.2
Q ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHH
Q psy12562 414 QYTMETLRVGWEQLLTSINRNINEVEN 440 (599)
Q Consensus 414 ~~~~~~l~~~w~~l~~~~~~r~~~Le~ 440 (599)
..+.+++...|..+...+...+..|+.
T Consensus 1568 ~ek~Ee~E~~rk~~~~~i~~~q~~Le~ 1594 (1930)
T KOG0161|consen 1568 QEKDEEIEELRKNLQRQLESLQAELEA 1594 (1930)
T ss_pred HhhhHHHHHHHHHHHHHHHHHHHhhhH
Confidence 345566777777777777766666665
No 134
>KOG0042|consensus
Probab=85.35 E-value=5.4 Score=41.76 Aligned_cols=74 Identities=22% Similarity=0.297 Sum_probs=67.1
Q ss_pred CCCHHHHHHHHHHHHhhcCCCCCCcCHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhCCCCCCccchHHHHHHHhhhc
Q psy12562 449 GITQEQLNEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPNSTGYVHFDAFLDFMTRES 527 (599)
Q Consensus 449 ~~~~~~~~~~~~~F~~~d~~~~g~l~~~e~~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~ 527 (599)
.+++++....+.-|..+|.|+.|+++..++...|...+... +...++.+.+..|.+-+|.+...+|.+++....
T Consensus 586 ~~~~~~~~~~~~rf~~lD~~k~~~~~i~~v~~vlk~~~~~~-----d~~~~~~~l~ea~~~~~g~v~l~e~~q~~s~~~ 659 (680)
T KOG0042|consen 586 KLTPEDFLRRKTRFAFLDADKKAYQAIADVLKVLKSENVGW-----DEDRLHEELQEADENLNGFVELREFLQLMSAIK 659 (680)
T ss_pred ccCHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHhcCCC-----CHHHHHHHHHHHHHhhcceeeHHHHHHHHHHHh
Confidence 56899999999999999999999999999999999988777 788899999999988899999999999987653
No 135
>KOG3555|consensus
Probab=82.58 E-value=5.3 Score=38.87 Aligned_cols=68 Identities=15% Similarity=0.170 Sum_probs=56.0
Q ss_pred CCCHHHHHHHHHHHHhhcCCCCCCcCHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhCCCCCCccchHHHHHHHhh
Q psy12562 449 GITQEQLNEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPNSTGYVHFDAFLDFMTR 525 (599)
Q Consensus 449 ~~~~~~~~~~~~~F~~~d~~~~g~l~~~e~~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~ 525 (599)
.+.+--...+.=+|..+|.|.+|.|+..|+..+-. .- ++.=++.+|...|...||.|+-.|++..+.+
T Consensus 243 s~~p~CKds~gWMFnklD~N~Dl~Ld~sEl~~I~l----dk-----nE~CikpFfnsCD~~kDg~iS~~EWC~CF~k 310 (434)
T KOG3555|consen 243 SILPICKDSLGWMFNKLDTNYDLLLDQSELRAIEL----DK-----NEACIKPFFNSCDTYKDGSISTNEWCYCFQK 310 (434)
T ss_pred ccCcchhhhhhhhhhccccccccccCHHHhhhhhc----cC-----chhHHHHHHhhhcccccCccccchhhhhhcc
Confidence 35556667788899999999999999999988743 23 4556778999999999999999999998765
No 136
>PF06008 Laminin_I: Laminin Domain I; InterPro: IPR009254 Laminins are glycoproteins that are major constituents of the basement membrane of cells. Laminins are trimeric molecules; laminin-1 is an alpha1 beta1 gamma1 trimer. It has been suggested that the domains I and II from laminin A, B1 and B2 may come together to form a triple helical coiled-coil structure []. Binding to cells via a high affinity receptor, laminin is thought to mediate the attachment, migration and organisation of cells into tissues during embryonic development by interacting with other extracellular matrix components.; GO: 0005102 receptor binding, 0030155 regulation of cell adhesion, 0030334 regulation of cell migration, 0045995 regulation of embryonic development, 0005606 laminin-1 complex
Probab=81.76 E-value=52 Score=31.81 Aligned_cols=63 Identities=11% Similarity=0.167 Sum_probs=32.7
Q ss_pred HHHHHHHhchhhhhHHHHHHHHhhhhccCCCCHHHHHHHHHHHHhhhhccccchHHHHHHHHHH
Q psy12562 339 RRQFAEKANQVGPWIERQMDAVTSIGMGLQGSLEDQLHRLKEYEQGVYAYKPHIEELEKIHQAV 402 (599)
Q Consensus 339 ~~~f~~~~~~~~~Wl~e~~~~l~~~~~~~~~~~e~~~~~~~~~~~ei~~~~~~~~~l~~~~~~l 402 (599)
+.+|.....++.+|+.+......... .........+..+..-..++......+......|+.+
T Consensus 187 L~~~~~kL~Dl~~~l~eA~~~~~ea~-~ln~~n~~~l~~~~~k~~~l~~~~~~~~~~L~~a~~~ 249 (264)
T PF06008_consen 187 LNDYNAKLQDLRDLLNEAQNKTREAE-DLNRANQKNLEDLEKKKQELSEQQNEVSETLKEAEDL 249 (264)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33488888888888888776654321 0112223334444444444444444444444444433
No 137
>PF09069 EF-hand_3: EF-hand; InterPro: IPR015154 Like other EF hand domains, this domain forms a helix-loop-helix motif, though since it does not contain the canonical pattern of calcium binding residues found in many EF hand domains, it does not bind calcium ions. The main function of this domain is the provision of specificity in beta-dystroglycan recognition, though in dystrophin it serves an additional role: stabilisation of the WW domain (IPR001202 from INTERPRO), enhancing dystroglycan binding []. ; PDB: 1EG3_A 1EG4_A.
Probab=81.48 E-value=12 Score=29.33 Aligned_cols=67 Identities=16% Similarity=0.247 Sum_probs=43.4
Q ss_pred HHHHHHHHhhcCCCCCCcCHHHHHHHHH-------HcCCCCCCCCCCHHHHHHHHHHhCCCCCCccchHHHHHHHhhh
Q psy12562 456 NEFRASFNHFDKNRTGRLAPEEFKSCLV-------SLGYSIGKDRQGEIDFQRILAVVDPNSTGYVHFDAFLDFMTRE 526 (599)
Q Consensus 456 ~~~~~~F~~~d~~~~g~l~~~e~~~~l~-------~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~ 526 (599)
++++-+|..+ .|++|.++...|...++ .+|..+.+.. .+..++..|... .++..|+.+.|+..+...
T Consensus 3 dKyRylFsli-sd~~g~~~~~~l~~lL~d~lqip~~vgE~~aFg~-~e~sv~sCF~~~--~~~~~I~~~~Fl~wl~~e 76 (90)
T PF09069_consen 3 DKYRYLFSLI-SDSNGCMDQRKLGLLLHDVLQIPRAVGEGPAFGY-IEPSVRSCFQQV--QLSPKITENQFLDWLMSE 76 (90)
T ss_dssp HHHHHHHHHH-S-TTS-B-HHHHHHHHHHHHHHHHHTT-GGGGT---HHHHHHHHHHT--TT-S-B-HHHHHHHHHT-
T ss_pred HHHHHHHHHH-cCCCCCCcHHHHHHHHHHHHHHHHHhCccccccC-cHHHHHHHhccc--CCCCccCHHHHHHHHHhC
Confidence 5678899988 68899999988777665 4466554433 677888888875 245679999999998763
No 138
>KOG4578|consensus
Probab=79.84 E-value=1.2 Score=42.69 Aligned_cols=68 Identities=18% Similarity=0.158 Sum_probs=49.1
Q ss_pred HHHHHHHHHhhcCCCCCCcCHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhCCCCCCccchHHHHHHHhhh
Q psy12562 455 LNEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPNSTGYVHFDAFLDFMTRE 526 (599)
Q Consensus 455 ~~~~~~~F~~~d~~~~g~l~~~e~~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~ 526 (599)
...+.=.|..+|+|.++.|...|++..-+.+-.... ...=...+++..|.|+|..|++.|++..+..-
T Consensus 332 eRvv~w~F~qLdkN~nn~i~rrEwKpFK~~l~k~s~----~rkC~rk~~~yCDlNkDKkISl~Ew~~CL~~~ 399 (421)
T KOG4578|consen 332 ERVVHWYFNQLDKNSNNDIERREWKPFKRVLLKKSK----PRKCSRKFFKYCDLNKDKKISLDEWRGCLGVE 399 (421)
T ss_pred hheeeeeeeeecccccCccchhhcchHHHHHHhhcc----HHHHhhhcchhcccCCCceecHHHHhhhhccc
Confidence 345666799999999999999886665443321110 12334568899999999999999999988653
No 139
>KOG2243|consensus
Probab=79.81 E-value=1.6 Score=49.49 Aligned_cols=52 Identities=13% Similarity=0.346 Sum_probs=42.0
Q ss_pred HHHhhhCC-CCCcCHHHHhccC------CcchHHHHHHhcCCCCCCCCCCCCccHHHHHHHhhc
Q psy12562 539 SFRILAGD-KPYILPDELRREL------PPDQAEYCIQRMPPYKGPNAIPGALDYQSFSTALYG 595 (599)
Q Consensus 539 ~F~~~D~d-~G~it~~el~~~l------~~~~~~~~~~~~~~~~d~~~~dg~i~~~eF~~~~~~ 595 (599)
.|+.||+| .|.|+..+|...| +..++++++... ..|. +..++|++|++.+-.
T Consensus 4062 tfkeydpdgkgiiskkdf~kame~~k~ytqse~dfllsca----e~de-nd~~~y~dfv~rfhe 4120 (5019)
T KOG2243|consen 4062 TFKEYDPDGKGIISKKDFHKAMEGHKHYTQSEIDFLLSCA----EADE-NDMFDYEDFVDRFHE 4120 (5019)
T ss_pred cchhcCCCCCccccHHHHHHHHhccccchhHHHHHHHHhh----ccCc-cccccHHHHHHHhcC
Confidence 58889999 9999999999987 577899887654 3333 678999999987643
No 140
>TIGR02169 SMC_prok_A chromosome segregation protein SMC, primarily archaeal type. SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent.
Probab=79.71 E-value=1.5e+02 Score=35.74 Aligned_cols=18 Identities=11% Similarity=0.088 Sum_probs=7.2
Q ss_pred HHHHHHHHHHHHHHHHHH
Q psy12562 179 VNARCQRICDQWDHLGAL 196 (599)
Q Consensus 179 i~~~~~~l~~rw~~L~~~ 196 (599)
+...+..+..+...+...
T Consensus 292 l~~~~~~~~~~~~~~~~~ 309 (1164)
T TIGR02169 292 VKEKIGELEAEIASLERS 309 (1164)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 333444444444433333
No 141
>KOG2243|consensus
Probab=79.42 E-value=13 Score=42.81 Aligned_cols=60 Identities=12% Similarity=0.381 Sum_probs=50.0
Q ss_pred HHHHHhhcCCCCCCcCHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhCCCCCCccchHHHHHHHh
Q psy12562 459 RASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPNSTGYVHFDAFLDFMT 524 (599)
Q Consensus 459 ~~~F~~~d~~~~g~l~~~e~~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~ 524 (599)
.+.|+.+|+||.|.|+..+|..+|..... . +..+++-++.-...|.+..++|++|+.-+.
T Consensus 4060 sdtfkeydpdgkgiiskkdf~kame~~k~-y-----tqse~dfllscae~dend~~~y~dfv~rfh 4119 (5019)
T KOG2243|consen 4060 SDTFKEYDPDGKGIISKKDFHKAMEGHKH-Y-----TQSEIDFLLSCAEADENDMFDYEDFVDRFH 4119 (5019)
T ss_pred cccchhcCCCCCccccHHHHHHHHhcccc-c-----hhHHHHHHHHhhccCccccccHHHHHHHhc
Confidence 46799999999999999999999976433 2 466778788888888889999999998764
No 142
>KOG4578|consensus
Probab=78.57 E-value=1.4 Score=42.44 Aligned_cols=61 Identities=18% Similarity=0.148 Sum_probs=49.7
Q ss_pred HHHHHHHhhhCC-CCCcCHHHHhcc---C-CcchHHHHHHhcCCCCCCCCCCCCccHHHHHHHhhcC
Q psy12562 535 QVIDSFRILAGD-KPYILPDELRRE---L-PPDQAEYCIQRMPPYKGPNAIPGALDYQSFSTALYGE 596 (599)
Q Consensus 535 ~~~~~F~~~D~d-~G~it~~el~~~---l-~~~~~~~~~~~~~~~~d~~~~dg~i~~~eF~~~~~~~ 596 (599)
.+...|..+|.| ++.|.+.|+.-+ + .-...-.+..+|+..-|.|+ |..|+++||..+|-..
T Consensus 334 vv~w~F~qLdkN~nn~i~rrEwKpFK~~l~k~s~~rkC~rk~~~yCDlNk-DKkISl~Ew~~CL~~~ 399 (421)
T KOG4578|consen 334 VVHWYFNQLDKNSNNDIERREWKPFKRVLLKKSKPRKCSRKFFKYCDLNK-DKKISLDEWRGCLGVE 399 (421)
T ss_pred eeeeeeeeecccccCccchhhcchHHHHHHhhccHHHHhhhcchhcccCC-CceecHHHHhhhhccc
Confidence 466779999999 999999997653 3 34567778888999999998 9999999999988654
No 143
>KOG3866|consensus
Probab=77.64 E-value=3.3 Score=39.53 Aligned_cols=67 Identities=21% Similarity=0.309 Sum_probs=49.2
Q ss_pred HHHHHhhcCCCCCCcCHHHHHHHHHH-c--CCCCCCCCCCHH--------HHHHHHHHhCCCCCCccchHHHHHHHhh
Q psy12562 459 RASFNHFDKNRTGRLAPEEFKSCLVS-L--GYSIGKDRQGEI--------DFQRILAVVDPNSTGYVHFDAFLDFMTR 525 (599)
Q Consensus 459 ~~~F~~~d~~~~g~l~~~e~~~~l~~-~--g~~~~~~~~~~~--------~~~~~~~~~d~~~~g~I~~~eF~~~~~~ 525 (599)
+..|...|-|++|.++-.++..+++. + -|++.++.-.-. .-..++..+|.|.|..|+.+||+..-..
T Consensus 247 KTFF~LHD~NsDGfldeqELEaLFtkELEKvYdpkNeeDDM~EmeEErlRMREHVMk~vDtNqDRlvtleEFL~~t~~ 324 (442)
T KOG3866|consen 247 KTFFALHDLNSDGFLDEQELEALFTKELEKVYDPKNEEDDMKEMEEERLRMREHVMKQVDTNQDRLVTLEEFLNDTDN 324 (442)
T ss_pred chheeeeccCCcccccHHHHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHHHHHHhcccchhhhhhHHHHHhhhhh
Confidence 56788999999999999999999864 3 355544211111 1124678899999999999999988654
No 144
>KOG0976|consensus
Probab=77.06 E-value=1.2e+02 Score=33.44 Aligned_cols=77 Identities=12% Similarity=0.158 Sum_probs=47.6
Q ss_pred HHHHHHHHHHHHhHHhhHHHHHHHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy12562 138 KALKKKHEAFESDLAAHQDRVEQIAAIAQELNTLEYHDSVSVNARCQRICDQWDHLGALTQQRRHALDEAEKILEKI 214 (599)
Q Consensus 138 ~~~l~~h~~~~~el~~~~~~v~~l~~~~~~L~~~~~~~~~~i~~~~~~l~~rw~~L~~~~~~R~~~L~~~~~~~q~~ 214 (599)
+.+......++.++...+-.+..++..+..+...-...+.+|...-+.|.+.=..|...-.+-...|.++-..-..+
T Consensus 123 q~lQ~ti~~~q~d~ke~etelE~~~srlh~le~eLsAk~~eIf~~~~~L~nk~~~lt~~~~q~~tkl~e~~~en~~l 199 (1265)
T KOG0976|consen 123 QKLQDTIQGAQDDKKENEIEIENLNSRLHKLEDELSAKAHDIFMIGEDLHDKNEELNEFNMEFQTKLAEANREKKAL 199 (1265)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhHHhHHHHHHHHHHHHHHHHHHHH
Confidence 33444455566666666667777777777776665566667777777776666666666666666665554444433
No 145
>PF14513 DAG_kinase_N: Diacylglycerol kinase N-terminus; PDB: 1TUZ_A.
Probab=76.92 E-value=5.2 Score=34.10 Aligned_cols=69 Identities=16% Similarity=0.193 Sum_probs=40.4
Q ss_pred CCcCHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhCCCC-------CCccchHHHHHHHhhhcCCCCCHHHHHHHHHhh
Q psy12562 471 GRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPNS-------TGYVHFDAFLDFMTRESTDTDTAEQVIDSFRIL 543 (599)
Q Consensus 471 g~l~~~e~~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~-------~g~I~~~eF~~~~~~~~~~~~~~~~~~~~F~~~ 543 (599)
+.|+..||..+=.-+.+ +...+..++..|..+| .+.|+|+.|..+|..++....+.+=....|..|
T Consensus 6 ~~lsp~eF~qLq~y~ey-------s~kklkdvl~eF~~~g~~~~~~~~~~Id~egF~~Fm~~yLe~d~P~~lc~hLF~sF 78 (138)
T PF14513_consen 6 VSLSPEEFAQLQKYSEY-------STKKLKDVLKEFHGDGSLAKYNPEEPIDYEGFKLFMKTYLEVDLPEDLCQHLFLSF 78 (138)
T ss_dssp S-S-HHHHHHHHHHHHH-----------HHHHHHHH-HTSGGGGGEETTEE-HHHHHHHHHHHTT-S--HHHHHHHHHHS
T ss_pred eccCHHHHHHHHHHHHH-------HHHHHHHHHHHHhcCCcccccCCCCCcCHHHHHHHHHHHHcCCCCHHHHHHHHHHH
Confidence 56777777766444433 2335666776664333 457999999999999888777777778889998
Q ss_pred hCC
Q psy12562 544 AGD 546 (599)
Q Consensus 544 D~d 546 (599)
-..
T Consensus 79 ~~~ 81 (138)
T PF14513_consen 79 QKK 81 (138)
T ss_dssp ---
T ss_pred hCc
Confidence 654
No 146
>PF14643 DUF4455: Domain of unknown function (DUF4455)
Probab=76.89 E-value=1.1e+02 Score=32.60 Aligned_cols=100 Identities=16% Similarity=0.198 Sum_probs=60.1
Q ss_pred HHHHHHHHHHHHhHHhHHhcCCCCC--CCCCCCchhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy12562 36 EQKAKLETNFNTLQTKLRLSNRPAY--MPTEGKMVSDIANAWKGLETSEKSFEEWLLSEMMRLERLEHLAQKFKHKADIH 113 (599)
Q Consensus 36 ~~~~~le~~l~~~~~~l~~~~~~~~--~~~~~~~~~~l~~~w~~L~~~~~~r~~~L~~~~~rl~~l~~l~~~f~~~~~~~ 113 (599)
.....+...+......+......-. ........+.|...|+.+......|...+.+.-..|..++. ..++.+
T Consensus 33 ~~~~~l~~~l~~~d~~i~~~~~~l~~d~~l~~~~~~~l~~~w~~v~~~~~~r~~~I~~l~~~L~~~E~------~R~~~l 106 (473)
T PF14643_consen 33 EAGEDLKQKLAESDEEIEEIFSKLEDDSALLEYSIQDLLELWDEVAEHSQKRKQWIKELDEDLEELEK------ERADKL 106 (473)
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHhcCchhHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------HHHHHH
Confidence 3333444444444444444442222 23556777889999999999988888888877766665442 333444
Q ss_pred HhhhhhHHHhcccCCCCCCCHHHHHHHHHH
Q psy12562 114 EDWTRGKEEMLQSSDFRQCKLNELKALKKK 143 (599)
Q Consensus 114 ~~Wl~~~e~~l~~~~~~~~~l~~v~~~l~~ 143 (599)
..-|...-..|....+ ..+.+|..++.+
T Consensus 107 ~~~l~~~~~~L~~ia~--~~~~dv~rli~~ 134 (473)
T PF14643_consen 107 KKVLRKYVEILEKIAH--LLPPDVERLIEK 134 (473)
T ss_pred HHHHHHHHHHHHHHHc--cCcHHHHHHHHH
Confidence 4555555555555444 366677777665
No 147
>KOG4809|consensus
Probab=76.47 E-value=1.1e+02 Score=32.33 Aligned_cols=166 Identities=13% Similarity=0.159 Sum_probs=89.4
Q ss_pred chHHHHHHHHHHHHHhHHhHHhcCCCCCCCCCCCchhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy12562 33 PRVEQKAKLETNFNTLQTKLRLSNRPAYMPTEGKMVSDIANAWKGLETSEKSFEEWLLSEMMRLERLEHLAQKFKHKADI 112 (599)
Q Consensus 33 ~~~~~~~~le~~l~~~~~~l~~~~~~~~~~~~~~~~~~l~~~w~~L~~~~~~r~~~L~~~~~rl~~l~~l~~~f~~~~~~ 112 (599)
.+.+++...+.+...+..++.++.+ .. ..-....-++......|-++-..+...|... +-++.+=...|..
T Consensus 328 E~~EeIe~~~ke~kdLkEkv~~lq~-~l-~eke~sl~dlkehassLas~glk~ds~Lk~l-------eIalEqkkEec~k 398 (654)
T KOG4809|consen 328 ERLEEIESFRKENKDLKEKVNALQA-EL-TEKESSLIDLKEHASSLASAGLKRDSKLKSL-------EIALEQKKEECSK 398 (654)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-HH-HHHHHHHHHHHHHHHHHHHHhhhhhhhhhHH-------HHHHHHHHHHHHH
Confidence 4445555555556666665544443 10 0111223345555555555544444444433 3344466778888
Q ss_pred HHhhhhhHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhHHhhHHHHHHHHHHHHHHhhccCCCchhHHHHHHHHHHHHHH
Q psy12562 113 HEDWTRGKEEMLQSSDFRQCKLNELKALKKKHEAFESDLAAHQDRVEQIAAIAQELNTLEYHDSVSVNARCQRICDQWDH 192 (599)
Q Consensus 113 ~~~Wl~~~e~~l~~~~~~~~~l~~v~~~l~~h~~~~~el~~~~~~v~~l~~~~~~L~~~~~~~~~~i~~~~~~l~~rw~~ 192 (599)
++.-|..+-..+...-..+..-+-++.+-..-..++.++...+..+..+..+-.++........+.|...--.+.++=..
T Consensus 399 me~qLkkAh~~~ddar~~pe~~d~i~~le~e~~~y~de~~kaqaevdrlLeilkeveneKnDkdkkiaeler~~kdqnkk 478 (654)
T KOG4809|consen 399 MEAQLKKAHNIEDDARMNPEFADQIKQLEKEASYYRDECGKAQAEVDRLLEILKEVENEKNDKDKKIAELERHMKDQNKK 478 (654)
T ss_pred HHHHHHHHHHhhHhhhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccchhhhcCchhhhhhhH
Confidence 88888877776665443333445555555556666777777777777777776666555444444444433444444444
Q ss_pred HHHHHHHHHHHHHHH
Q psy12562 193 LGALTQQRRHALDEA 207 (599)
Q Consensus 193 L~~~~~~R~~~L~~~ 207 (599)
+..+...+...+..+
T Consensus 479 vaNlkHk~q~Ekkk~ 493 (654)
T KOG4809|consen 479 VANLKHKQQLEKKKN 493 (654)
T ss_pred HhhHHHHHHHHHHHH
Confidence 444444444444443
No 148
>PF05517 p25-alpha: p25-alpha ; InterPro: IPR008907 This family encodes a 25 kDa protein that is phosphorylated by a Ser/Thr-Pro kinase []. It has been described as a brain specific protein, but it is found in Tetrahymena thermophila.; PDB: 1WLM_A 1PUL_A 2JRF_A.
Probab=76.22 E-value=9.5 Score=33.42 Aligned_cols=65 Identities=18% Similarity=0.321 Sum_probs=45.6
Q ss_pred HHHHHhh---cCCCCCCcCHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhCCCCCCccchHHHHHHHhh
Q psy12562 459 RASFNHF---DKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPNSTGYVHFDAFLDFMTR 525 (599)
Q Consensus 459 ~~~F~~~---d~~~~g~l~~~e~~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~ 525 (599)
..+|..| -..+...|+...|..+++..|..-+ ..+...+.-+|..+-..+...|+|++|+.++..
T Consensus 2 ~~~F~~f~~fG~~~~~~m~~~~F~Kl~kD~~i~d~--k~t~tdvDiiF~Kvk~k~~~~I~f~~F~~aL~~ 69 (154)
T PF05517_consen 2 EAVFKAFASFGKKNGTEMDSKNFAKLCKDCGIIDK--KLTSTDVDIIFSKVKAKGARKITFEQFLEALAE 69 (154)
T ss_dssp HHHHHHHHCSSTSTSSEEEHHHHHHHHHHTSS--S--SS-HHHHHHHHHHHT-SS-SEEEHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCccccccHHHHHHHHHHcCCCCC--CCchHHHHHHHHHhhcCCCcccCHHHHHHHHHH
Confidence 3445554 3455668899999999998765211 128889999999987677778999999998864
No 149
>PRK04778 septation ring formation regulator EzrA; Provisional
Probab=75.16 E-value=1.3e+02 Score=32.81 Aligned_cols=121 Identities=16% Similarity=0.156 Sum_probs=68.1
Q ss_pred CCchhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHhhhhhHHHhcccCCCCCCCHHHHHH
Q psy12562 65 GKMVSDIANAWKGLETSEKSFEEWLLSEMMRLERLEHLAQKFK-----HKADIHEDWTRGKEEMLQSSDFRQCKLNELKA 139 (599)
Q Consensus 65 ~~~~~~l~~~w~~L~~~~~~r~~~L~~~~~rl~~l~~l~~~f~-----~~~~~~~~Wl~~~e~~l~~~~~~~~~l~~v~~ 139 (599)
...-...++.|+.+... +-..+.. .+-..+....+|. ..+..+.+-|...+..+.. -..++..
T Consensus 63 ~~~f~~w~~~~~~i~~~---~~~~ie~---~l~~ae~~~~~~~f~~a~~~~~~~~~~l~~~e~~~~~------i~~~l~~ 130 (569)
T PRK04778 63 EEKFEEWRQKWDEIVTN---SLPDIEE---QLFEAEELNDKFRFRKAKHEINEIESLLDLIEEDIEQ------ILEELQE 130 (569)
T ss_pred HHHHHHHHHHHHHHHHh---hhhhHHH---HHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHH------HHHHHHH
Confidence 34455588889886544 1111222 2222233333332 2334444444444443333 3355777
Q ss_pred HHHHHHHHHHhHHhhHHHHHHHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHH
Q psy12562 140 LKKKHEAFESDLAAHQDRVEQIAAIAQELNTLEYHDSVSVNARCQRICDQWDHLGALT 197 (599)
Q Consensus 140 ~l~~h~~~~~el~~~~~~v~~l~~~~~~L~~~~~~~~~~i~~~~~~l~~rw~~L~~~~ 197 (599)
++..++.-..++.........+....-.-...-.+..+.|..++..+...+.....+.
T Consensus 131 l~~~e~~nr~~v~~l~~~y~~~rk~ll~~~~~~G~a~~~le~~l~~~e~~f~~f~~l~ 188 (569)
T PRK04778 131 LLESEEKNREEVEQLKDLYRELRKSLLANRFSFGPALDELEKQLENLEEEFSQFVELT 188 (569)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccchHHHHHHHHHHHHHHHHHHHHHh
Confidence 7777777777777777777766654332222223466889999999999888887665
No 150
>KOG1707|consensus
Probab=74.74 E-value=3.4 Score=43.46 Aligned_cols=73 Identities=21% Similarity=0.315 Sum_probs=53.4
Q ss_pred hhccCCCHHHHHHHHHHHHhhcCCCCCCcCHHHHHHHHHHcCCCCCC-CCCCHHHHHHHHHHhCCCCCCccchHHHHHHH
Q psy12562 445 RDSKGITQEQLNEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGK-DRQGEIDFQRILAVVDPNSTGYVHFDAFLDFM 523 (599)
Q Consensus 445 ~~~~~~~~~~~~~~~~~F~~~d~~~~g~l~~~e~~~~l~~~g~~~~~-~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~ 523 (599)
....++++.-++.+..+|..||.|+||.++..||..++...+..|-. .++.+.. -.+..|.+++.-|+..|
T Consensus 304 ~~s~ELs~~~~~Fl~~~f~~~D~d~Dg~L~p~El~~LF~~~P~~pW~~~~~~~~t--------~~~~~G~ltl~g~l~~W 375 (625)
T KOG1707|consen 304 DQSVELSPKGYRFLVDVFEKFDRDNDGALSPEELKDLFSTAPGSPWTSSPYKDST--------VKNERGWLTLNGFLSQW 375 (625)
T ss_pred CcceeccHHHHHHHHHHHHhccCCCCCCcCHHHHHHHhhhCCCCCCCCCcccccc--------eecccceeehhhHHHHH
Confidence 34557788889999999999999999999999999999876543310 0001100 12367899999999987
Q ss_pred hh
Q psy12562 524 TR 525 (599)
Q Consensus 524 ~~ 525 (599)
.-
T Consensus 376 sL 377 (625)
T KOG1707|consen 376 SL 377 (625)
T ss_pred HH
Confidence 54
No 151
>COG1196 Smc Chromosome segregation ATPases [Cell division and chromosome partitioning]
Probab=73.37 E-value=2.1e+02 Score=34.41 Aligned_cols=22 Identities=23% Similarity=0.295 Sum_probs=15.6
Q ss_pred HHHHHHHHhhcCCCCCCcCHHH
Q psy12562 456 NEFRASFNHFDKNRTGRLAPEE 477 (599)
Q Consensus 456 ~~~~~~F~~~d~~~~g~l~~~e 477 (599)
..|..+|..+-++|+|.|...+
T Consensus 1020 ~~F~~if~~L~~GG~a~L~l~~ 1041 (1163)
T COG1196 1020 ENFSEIFKELFGGGTAELELTE 1041 (1163)
T ss_pred HHHHHHHHHhCCCCeeEEEeCC
Confidence 5577788887777777776554
No 152
>TIGR02168 SMC_prok_B chromosome segregation protein SMC, common bacterial type. SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle.
Probab=68.20 E-value=2.7e+02 Score=33.48 Aligned_cols=17 Identities=18% Similarity=0.268 Sum_probs=7.6
Q ss_pred HHHHHHhhcCCCCCCcC
Q psy12562 458 FRASFNHFDKNRTGRLA 474 (599)
Q Consensus 458 ~~~~F~~~d~~~~g~l~ 474 (599)
|..+|..+-+++++.+.
T Consensus 1045 F~~lf~~~~~~~~~~~~ 1061 (1179)
T TIGR02168 1045 FQRVFPKLFGGGEAELR 1061 (1179)
T ss_pred HHHHHHHHhCCCeEEEE
Confidence 44444444344444443
No 153
>PF08414 NADPH_Ox: Respiratory burst NADPH oxidase; InterPro: IPR013623 This domain is found in plant proteins such as respiratory burst NADPH oxidase proteins which produce reactive oxygen species as a defence mechanism. It tends to occur to the N terminus of an EF-hand (IPR002048 from INTERPRO), which suggests a direct regulatory effect of Ca2+ on the activity of the NADPH oxidase in plants []. ; GO: 0004601 peroxidase activity, 0050664 oxidoreductase activity, acting on NADH or NADPH, oxygen as acceptor, 0055114 oxidation-reduction process; PDB: 3A8R_A.
Probab=67.95 E-value=17 Score=28.67 Aligned_cols=61 Identities=16% Similarity=0.322 Sum_probs=40.5
Q ss_pred HHHHHHHHhhcCCCCCCcCHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhCC--C-CCCccchHHHHHHHhhh
Q psy12562 456 NEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDP--N-STGYVHFDAFLDFMTRE 526 (599)
Q Consensus 456 ~~~~~~F~~~d~~~~g~l~~~e~~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~--~-~~g~I~~~eF~~~~~~~ 526 (599)
..+..-|+.+.. +|.|+.+.|..|+ |+.- +.+....+|..+.. + ..+.|+.+|...+|...
T Consensus 30 ~~VE~RFd~La~--dG~L~rs~Fg~CI---GM~d-----SkeFA~eLFdALaRrr~i~~~~I~k~eL~efW~qi 93 (100)
T PF08414_consen 30 KEVEKRFDKLAK--DGLLPRSDFGECI---GMKD-----SKEFAGELFDALARRRGIKGDSITKDELKEFWEQI 93 (100)
T ss_dssp HHHHHHHHHH-B--TTBEEGGGHHHHH---T--S------HHHHHHHHHHHHHHTT--SSEE-HHHHHHHHHHH
T ss_pred HHHHHHHHHhCc--CCcccHHHHHHhc---CCcc-----cHHHHHHHHHHHHHhcCCccCCcCHHHHHHHHHHh
Confidence 556677777766 8999999999996 5544 67777777766541 1 13579999988888653
No 154
>PF05218 DUF713: Protein of unknown function (DUF713); InterPro: IPR007883 This family contains proteins of unknown function from Caenorhabditis species.
Probab=67.77 E-value=95 Score=28.05 Aligned_cols=56 Identities=18% Similarity=0.431 Sum_probs=41.6
Q ss_pred HHHHhhHhHhHHHHHHHHhhcchHHHHHHHHHHhchhhhhHHHHHHHHhhhhccCCCCHHHHHHHHHHHHhhhh
Q psy12562 313 DVRKLVPQRDTTLQAELRKQQNNETLRRQFAEKANQVGPWIERQMDAVTSIGMGLQGSLEDQLHRLKEYEQGVY 386 (599)
Q Consensus 313 ~L~~~~~~R~~~L~~~l~~~~~~~~l~~~f~~~~~~~~~Wl~e~~~~l~~~~~~~~~~~e~~~~~~~~~~~ei~ 386 (599)
++......|-..+-+++. |.+.|...-.+..+||......+.. ...++..|+.++.
T Consensus 5 ~~r~E~k~r~~a~~~CI~-------Lk~rFEekE~eWsdWLk~~R~~I~~-----------~~~~f~~Fe~~~~ 60 (182)
T PF05218_consen 5 KMRRESKQRFAAFLQCIQ-------LKQRFEEKEQEWSDWLKKLRQPIVR-----------LKNRFSDFEDEIK 60 (182)
T ss_pred HHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHH-----------HHHHHHHHhHHHh
Confidence 455556667777888888 8999999999999999988766643 3445666666554
No 155
>KOG1264|consensus
Probab=67.32 E-value=12 Score=40.94 Aligned_cols=144 Identities=14% Similarity=0.194 Sum_probs=86.2
Q ss_pred cCCCHHHHHHH-HHHHHhhcCCCCCCcCHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhCCCCCCccchHHHHHHHhhh
Q psy12562 448 KGITQEQLNEF-RASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPNSTGYVHFDAFLDFMTRE 526 (599)
Q Consensus 448 ~~~~~~~~~~~-~~~F~~~d~~~~g~l~~~e~~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~ 526 (599)
...++-++..| +..|-..|...-..++..+++..+...++.++ +......-|.. |...++.++|+.|-.++.+.
T Consensus 135 ~a~~p~qI~~wlrk~~ysvd~~~~~~isard~k~~l~qvn~k~~----~~kfl~e~~te-d~~~k~dlsf~~f~~ly~~l 209 (1267)
T KOG1264|consen 135 NAPTPLQIERWLRKQIYSVDQTRENSISARDLKTILPQVNFKVS----SAKFLKEKFTE-DGARKDDLSFEQFHLLYKKL 209 (1267)
T ss_pred cCCChHHHHHHHHhhheeccchhhhheeHHhhhcccccceEEec----hHHHHHHHHhH-hhhccccccHHHHHHHHHHH
Confidence 35667777775 45555667666667999999999987777651 23333233333 23456779999999998876
Q ss_pred cCCCCCHH--HHHHHHHhhhCC---CCCcCHHHHhccCCc----------chHHHHHHhcCCCCCCCCCCCCccHHHHHH
Q psy12562 527 STDTDTAE--QVIDSFRILAGD---KPYILPDELRRELPP----------DQAEYCIQRMPPYKGPNAIPGALDYQSFST 591 (599)
Q Consensus 527 ~~~~~~~~--~~~~~F~~~D~d---~G~it~~el~~~l~~----------~~~~~~~~~~~~~~d~~~~dg~i~~~eF~~ 591 (599)
+....... .....|-.--++ --.|+..+|.++|-. ..+.+++...++....+-..-++.+.||+.
T Consensus 210 mfs~~~a~l~e~~~~~~~~~~~~~d~~vV~~~ef~rFL~~~Q~e~~Asdr~av~~~~r~F~~D~~re~~EPyl~v~EFv~ 289 (1267)
T KOG1264|consen 210 MFSQQKAILLEFKKDFILGNTDRPDASVVYLQEFQRFLIHEQQEHWASDRNAVREFMRKFIDDTMRETAEPYLFVDEFVT 289 (1267)
T ss_pred hhccchhhhhcccchhhhcCCCCccceEeeHHHHHHHHHhhhHHHhhhHHHHHHHHHHHHHhhhhhhccCcceeHHHHHH
Confidence 54322211 111112111111 247899999998821 234444555444322222256899999999
Q ss_pred HhhcC
Q psy12562 592 ALYGE 596 (599)
Q Consensus 592 ~~~~~ 596 (599)
.+|..
T Consensus 290 fLFSr 294 (1267)
T KOG1264|consen 290 FLFSR 294 (1267)
T ss_pred HHhhc
Confidence 99874
No 156
>TIGR02169 SMC_prok_A chromosome segregation protein SMC, primarily archaeal type. SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent.
Probab=66.90 E-value=2.9e+02 Score=33.28 Aligned_cols=19 Identities=26% Similarity=0.469 Sum_probs=10.4
Q ss_pred HHHHHHHHhhcCCCCCCcCH
Q psy12562 456 NEFRASFNHFDKNRTGRLAP 475 (599)
Q Consensus 456 ~~~~~~F~~~d~~~~g~l~~ 475 (599)
..|..+|..+. +|+|.|..
T Consensus 1029 ~~f~~~~~~l~-~~~~~l~~ 1047 (1164)
T TIGR02169 1029 ENFNEIFAELS-GGTGELIL 1047 (1164)
T ss_pred HHHHHHHHHHh-CCeEEEEe
Confidence 34556666655 56665543
No 157
>KOG0933|consensus
Probab=65.95 E-value=2.5e+02 Score=32.26 Aligned_cols=39 Identities=8% Similarity=0.211 Sum_probs=20.8
Q ss_pred HhhcHHHHHHHHHHhHHHHhhHHHHHHHHhHHHHHHHHH
Q psy12562 244 IVHTMEEIQGLIDAHSQFKATLGEADKEYNSIVNLVREV 282 (599)
Q Consensus 244 ~~~~~~~v~~ll~~h~~l~~el~~~~~~~~~~~~l~~~l 282 (599)
+-....+++.+.-+|+.++.++..++..+..+......+
T Consensus 810 ~ek~~~e~e~l~lE~e~l~~e~~~~k~~l~~~~~~~~~l 848 (1174)
T KOG0933|consen 810 LEKRENEYERLQLEHEELEKEISSLKQQLEQLEKQISSL 848 (1174)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334445555666666666666666665554444444333
No 158
>PF10191 COG7: Golgi complex component 7 (COG7); InterPro: IPR019335 The conserved oligomeric Golgi (COG) complex is an eight-subunit (Cog1-8) peripheral Golgi protein involved in membrane trafficking and glycoconjugate synthesis []. COG7 is required for normal Golgi morphology and trafficking. Mutation in COG7 causes a congenital disorder of glycosylation [].
Probab=65.43 E-value=2.5e+02 Score=32.02 Aligned_cols=48 Identities=15% Similarity=0.174 Sum_probs=25.9
Q ss_pred HHHHHHHHHHhhhhhHHHhcccCCCCCCCH-HHHHHHHHHHHHHHHhHHh
Q psy12562 105 KFKHKADIHEDWTRGKEEMLQSSDFRQCKL-NELKALKKKHEAFESDLAA 153 (599)
Q Consensus 105 ~f~~~~~~~~~Wl~~~e~~l~~~~~~~~~l-~~v~~~l~~h~~~~~el~~ 153 (599)
+|..+-=++..||...-......+.. ... ..+..+.-+.+.+-.+++.
T Consensus 4 ~f~~~~FD~~~WIN~~~~~~~~~~~~-~~~d~~ls~l~~kLql~~qe~~~ 52 (766)
T PF10191_consen 4 AFSDDDFDVKAWINAALKSRSKDEAL-EKADAHLSSLVMKLQLYSQEVNA 52 (766)
T ss_pred hhCcCCCCHHHHHHHHhhccCCCcch-hHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444445667888887765554332 111 1355555566666665554
No 159
>PF12128 DUF3584: Protein of unknown function (DUF3584); InterPro: IPR021979 This family consist of uncharacterised bacterial proteins.
Probab=65.12 E-value=3.2e+02 Score=33.14 Aligned_cols=81 Identities=15% Similarity=0.178 Sum_probs=50.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhHHHhhHHHHhhcHHHHHHHHHH
Q psy12562 178 SVNARCQRICDQWDHLGALTQQRRHALDEAEKILEKIDILHLEFAKRAAPFNNWLDGTREDLVDMFIVHTMEEIQGLIDA 257 (599)
Q Consensus 178 ~i~~~~~~l~~rw~~L~~~~~~R~~~L~~~~~~~q~~~~~~~~f~~~~~~l~~Wl~~~~~~l~~~~~~~~~~~v~~ll~~ 257 (599)
...+....+...|..+..........+.......+ .++......+..|... .|.+. |-|...+..+-.+
T Consensus 711 ~~~e~~~e~~~~~~~~~~~~d~~i~~i~~~i~~~~------~~~~~~~~~le~~~~~---eL~~~--GvD~~~I~~l~~~ 779 (1201)
T PF12128_consen 711 QLKELRNELKAQWQELEAELDEQIEQIKQEIAAAK------QEAKEQLKELEQQYNQ---ELAGK--GVDPERIQQLKQE 779 (1201)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHH---HHHhC--CCCHHHHHHHHHH
Confidence 33444445556676666666666666665544443 4488888888888774 34443 6677777777666
Q ss_pred hHHHHhhHHHHH
Q psy12562 258 HSQFKATLGEAD 269 (599)
Q Consensus 258 h~~l~~el~~~~ 269 (599)
.+.+..+|....
T Consensus 780 i~~L~~~l~~ie 791 (1201)
T PF12128_consen 780 IEQLEKELKRIE 791 (1201)
T ss_pred HHHHHHHHHHHH
Confidence 666666665544
No 160
>KOG4004|consensus
Probab=64.00 E-value=4.1 Score=36.26 Aligned_cols=53 Identities=17% Similarity=0.207 Sum_probs=33.8
Q ss_pred HHhhhCC--CCCcCHHHHhccCCcc-hHHHHHHhcCCCCCCCCCCCCccHHHHHHHh
Q psy12562 540 FRILAGD--KPYILPDELRRELPPD-QAEYCIQRMPPYKGPNAIPGALDYQSFSTAL 593 (599)
Q Consensus 540 F~~~D~d--~G~it~~el~~~l~~~-~~~~~~~~~~~~~d~~~~dg~i~~~eF~~~~ 593 (599)
|-.+|.. +||+|..||.-+-.|- =++.++..++..-|.|+ ||+|+.++|-.++
T Consensus 193 f~qld~~p~d~~~sh~el~pl~ap~ipme~c~~~f~e~cd~~n-d~~ial~ew~~c~ 248 (259)
T KOG4004|consen 193 FGQLDQHPIDGYLSHTELAPLRAPLIPMEHCTTRFFETCDLDN-DKYIALDEWAGCF 248 (259)
T ss_pred eccccCCCccccccccccccccCCcccHHhhchhhhhcccCCC-CCceeHHHhhccc
Confidence 5556665 7888888776543221 24455666666667777 7888888876554
No 161
>PLN02952 phosphoinositide phospholipase C
Probab=63.59 E-value=42 Score=36.40 Aligned_cols=88 Identities=10% Similarity=0.048 Sum_probs=59.4
Q ss_pred CCCCcCHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhCCCCCCccchHHHHHHHhhhcCCC-CCHHHHHHHHHhhh---
Q psy12562 469 RTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPNSTGYVHFDAFLDFMTRESTDT-DTAEQVIDSFRILA--- 544 (599)
Q Consensus 469 ~~g~l~~~e~~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~-~~~~~~~~~F~~~D--- 544 (599)
+.|.+++.+|..+.+.+...- .+...++..+|..+..+ .+.++.++|..++...-... .+.+....+|..+-
T Consensus 13 ~~g~l~f~~f~~f~~~~k~~~---~~~r~ei~~lf~~~~~~-~~~mt~~~l~~FL~~~Q~e~~~~~~~~~~i~~~~~~~~ 88 (599)
T PLN02952 13 DSGSYNYKMFNLFNRKFKITE---AEPPDDVKDVFCKFSVG-GGHMGADQLRRFLVLHQDELDCTLAEAQRIVEEVINRR 88 (599)
T ss_pred cCCCcCHHHHHHHHHHhcccc---CCChHHHHHHHHHHhCC-CCccCHHHHHHHHHHhCCCcCCCHHHHHHHHHHHHhhc
Confidence 468999999988777653211 11467899999998644 46899999999998654322 34455555554431
Q ss_pred ----CC-CCCcCHHHHhccCC
Q psy12562 545 ----GD-KPYILPDELRRELP 560 (599)
Q Consensus 545 ----~d-~G~it~~el~~~l~ 560 (599)
.. .+.++.+.|..+|.
T Consensus 89 ~~~~~~~~~~l~~~~F~~~l~ 109 (599)
T PLN02952 89 HHVTRYTRHGLNLDDFFHFLL 109 (599)
T ss_pred cccccccccCcCHHHHHHHHc
Confidence 11 34588999888773
No 162
>KOG3866|consensus
Probab=62.21 E-value=3 Score=39.80 Aligned_cols=47 Identities=19% Similarity=0.340 Sum_probs=32.2
Q ss_pred CHHHHHHHHHHc-CCCCCCCCCCHHHHHHHHHHhCCCCCCccchHHHHHHHhh
Q psy12562 474 APEEFKSCLVSL-GYSIGKDRQGEIDFQRILAVVDPNSTGYVHFDAFLDFMTR 525 (599)
Q Consensus 474 ~~~e~~~~l~~~-g~~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~ 525 (599)
+...++.++..+ |..+ +.-.-..+|...|.|+||.++-.|.-.++..
T Consensus 225 SkdQLkEVWEE~DgLdp-----n~fdPKTFF~LHD~NsDGfldeqELEaLFtk 272 (442)
T KOG3866|consen 225 SKDQLKEVWEESDGLDP-----NQFDPKTFFALHDLNSDGFLDEQELEALFTK 272 (442)
T ss_pred cHHHHHHHHHHhcCCCc-----ccCCcchheeeeccCCcccccHHHHHHHHHH
Confidence 456777777554 5665 4434456788888888888888877776654
No 163
>KOG0169|consensus
Probab=59.52 E-value=30 Score=37.88 Aligned_cols=75 Identities=16% Similarity=0.207 Sum_probs=57.4
Q ss_pred CHHHHHHHHHHhCCCCCCccchHHHHHHHhhhcCCCCCHHHHHHHHHhhhCC-CCCcCHHHHhccC-----CcchHHHHH
Q psy12562 495 GEIDFQRILAVVDPNSTGYVHFDAFLDFMTRESTDTDTAEQVIDSFRILAGD-KPYILPDELRREL-----PPDQAEYCI 568 (599)
Q Consensus 495 ~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~~F~~~D~d-~G~it~~el~~~l-----~~~~~~~~~ 568 (599)
...++..+|..+|++++|.++|.+-..++... ........+...|+..|.. +|.+...++..+. .| ++.+++
T Consensus 134 ~~~wi~~~~~~ad~~~~~~~~~~~~~~~~~~~-n~~l~~~~~~~~f~e~~~~~~~k~~~~~~~~~~~~~~~rp-ev~~~f 211 (746)
T KOG0169|consen 134 REHWIHSIFQEADKNKNGHMSFDEVLDLLKQL-NVQLSESKARRLFKESDNSQTGKLEEEEFVKFRKELTKRP-EVYFLF 211 (746)
T ss_pred HHHHHHHHHHHHccccccccchhhHHHHHHHH-HHhhhHHHHHHHHHHHHhhccceehHHHHHHHHHhhccCc-hHHHHH
Confidence 56788899999999999999999988776542 2223345678888888877 9999999998865 34 666666
Q ss_pred Hhc
Q psy12562 569 QRM 571 (599)
Q Consensus 569 ~~~ 571 (599)
...
T Consensus 212 ~~~ 214 (746)
T KOG0169|consen 212 VQY 214 (746)
T ss_pred HHH
Confidence 665
No 164
>cd07313 terB_like_2 tellurium resistance terB-like protein, subgroup 2. This family includes several uncharacterized bacterial proteins. Protein sequence homology analysis shows they are similar to tellurium resistance protein terB, but the function of this family is unknown.
Probab=59.22 E-value=24 Score=28.27 Aligned_cols=81 Identities=12% Similarity=0.112 Sum_probs=43.1
Q ss_pred CCCcCHHHHHHHHHHcC--CCCCCCCCCHHHHHHHHHHhCCCCCCccchHHHHHHHhhhcCCCCCHHHHHHHHHhhhCCC
Q psy12562 470 TGRLAPEEFKSCLVSLG--YSIGKDRQGEIDFQRILAVVDPNSTGYVHFDAFLDFMTRESTDTDTAEQVIDSFRILAGDK 547 (599)
Q Consensus 470 ~g~l~~~e~~~~l~~~g--~~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~~F~~~D~d~ 547 (599)
||.++..|...+-..+. +.+ +..+...++..+........++.+|...+...+ ++.....+....-...--|
T Consensus 13 DG~v~~~E~~~i~~~l~~~~~l-----~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~r~~~l~~L~~vA~AD 86 (104)
T cd07313 13 DGEYDEEERAAIDRLLAERFGL-----DAEEAAELLAEAEALEEEAPDLYEFTSLIKEHF-DYEERLELVEALWEVAYAD 86 (104)
T ss_pred cCCCCHHHHHHHHHHHHHHhCc-----CHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHhC-CHHHHHHHHHHHHHHHHhc
Confidence 56677666555443321 234 455666666666555556678888888776533 1111222322222222226
Q ss_pred CCcCHHHHh
Q psy12562 548 PYILPDELR 556 (599)
Q Consensus 548 G~it~~el~ 556 (599)
|.+++.|-.
T Consensus 87 G~~~~~E~~ 95 (104)
T cd07313 87 GELDEYEEH 95 (104)
T ss_pred CCCCHHHHH
Confidence 888877754
No 165
>PF06008 Laminin_I: Laminin Domain I; InterPro: IPR009254 Laminins are glycoproteins that are major constituents of the basement membrane of cells. Laminins are trimeric molecules; laminin-1 is an alpha1 beta1 gamma1 trimer. It has been suggested that the domains I and II from laminin A, B1 and B2 may come together to form a triple helical coiled-coil structure []. Binding to cells via a high affinity receptor, laminin is thought to mediate the attachment, migration and organisation of cells into tissues during embryonic development by interacting with other extracellular matrix components.; GO: 0005102 receptor binding, 0030155 regulation of cell adhesion, 0030334 regulation of cell migration, 0045995 regulation of embryonic development, 0005606 laminin-1 complex
Probab=58.18 E-value=1.8e+02 Score=28.04 Aligned_cols=124 Identities=10% Similarity=0.126 Sum_probs=67.7
Q ss_pred CCHHHHHHHHHHHHHHHHhHHhhHHHHHHHHHHHHHHhhccCCCchhHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHH
Q psy12562 132 CKLNELKALKKKHEAFESDLAAHQDRVEQIAAIAQELNTLEYHDSVSVNARCQRI-CDQWDHLGALTQQRRHALDEAEKI 210 (599)
Q Consensus 132 ~~l~~v~~~l~~h~~~~~el~~~~~~v~~l~~~~~~L~~~~~~~~~~i~~~~~~l-~~rw~~L~~~~~~R~~~L~~~~~~ 210 (599)
.+...+...+++-+..-.+|..+. +......+..=. ..+..+-.++... ...|.....+...=+..|.+
T Consensus 120 ~~~~~l~~~l~ea~~mL~emr~r~--f~~~~~~Ae~El----~~A~~LL~~v~~~~~~~~~~~~~l~~~i~~~L~~---- 189 (264)
T PF06008_consen 120 LPSEDLQRALAEAQRMLEEMRKRD--FTPQRQNAEDEL----KEAEDLLSRVQKWFQKPQQENESLAEAIRDDLND---- 189 (264)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhcc--chhHHHHHHHHH----HHHHHHHHHHHHHHhhHHHhhHHHHHHHHHHHHH----
Confidence 466778888888888877777663 333333322211 1223344444443 55666666655555555554
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhhhHHHhhHHHHhhcHHHHHHHHHHhHHHHhhHHHHHHHHhHHHH
Q psy12562 211 LEKIDILHLEFAKRAAPFNNWLDGTREDLVDMFIVHTMEEIQGLIDAHSQFKATLGEADKEYNSIVN 277 (599)
Q Consensus 211 ~q~~~~~~~~f~~~~~~l~~Wl~~~~~~l~~~~~~~~~~~v~~ll~~h~~l~~el~~~~~~~~~~~~ 277 (599)
|...+.++..||.++........- =....+..+..++.-..+|......+.....
T Consensus 190 ----------~~~kL~Dl~~~l~eA~~~~~ea~~--ln~~n~~~l~~~~~k~~~l~~~~~~~~~~L~ 244 (264)
T PF06008_consen 190 ----------YNAKLQDLRDLLNEAQNKTREAED--LNRANQKNLEDLEKKKQELSEQQNEVSETLK 244 (264)
T ss_pred ----------HHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 889999999999998766655421 1122333344444444444444443333333
No 166
>PF12325 TMF_TATA_bd: TATA element modulatory factor 1 TATA binding; InterPro: IPR022091 This is the C-terminal conserved coiled coil region of a family of TATA element modulatory factor 1 proteins conserved in eukaryotes []. The proteins bind to the TATA element of some RNA polymerase II promoters and repress their activity. by competing with the binding of TATA binding protein. TMF1_TATA_bd is the most conserved part of the TMFs []. TMFs are evolutionarily conserved golgins that bind Rab6, a ubiquitous ras-like GTP-binding Golgi protein, and contribute to Golgi organisation in animal [] and plant cells. The Rab6-binding domain appears to be the same region as this C-terminal family [].
Probab=56.33 E-value=1.2e+02 Score=25.30 Aligned_cols=77 Identities=14% Similarity=0.235 Sum_probs=52.2
Q ss_pred CCCHHHHHHHHHHHHHHHHhHHhhHHHHHHHHHHHHHHhhc-------------cCCCchhHHHHHHHHHHHHHHHHHHH
Q psy12562 131 QCKLNELKALKKKHEAFESDLAAHQDRVEQIAAIAQELNTL-------------EYHDSVSVNARCQRICDQWDHLGALT 197 (599)
Q Consensus 131 ~~~l~~v~~~l~~h~~~~~el~~~~~~v~~l~~~~~~L~~~-------------~~~~~~~i~~~~~~l~~rw~~L~~~~ 197 (599)
+.+...+..+-.....++.|+.+.+..+..+...-..+... .....+.+...+..+..|++.+..++
T Consensus 12 ~~~~~~ve~L~s~lr~~E~E~~~l~~el~~l~~~r~~l~~Eiv~l~~~~e~~~~~~~~~~~L~~el~~l~~ry~t~Lell 91 (120)
T PF12325_consen 12 GPSVQLVERLQSQLRRLEGELASLQEELARLEAERDELREEIVKLMEENEELRALKKEVEELEQELEELQQRYQTLLELL 91 (120)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 46888888888899999999999998888886554433221 01233456666667777777777666
Q ss_pred HHHHHHHHHH
Q psy12562 198 QQRRHALDEA 207 (599)
Q Consensus 198 ~~R~~~L~~~ 207 (599)
.++....++-
T Consensus 92 GEK~E~veEL 101 (120)
T PF12325_consen 92 GEKSEEVEEL 101 (120)
T ss_pred cchHHHHHHH
Confidence 6666655553
No 167
>TIGR00606 rad50 rad50. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=55.98 E-value=4.7e+02 Score=32.12 Aligned_cols=24 Identities=21% Similarity=0.187 Sum_probs=15.0
Q ss_pred HHHHHHHHHHHhhhhhHHHhcccC
Q psy12562 104 QKFKHKADIHEDWTRGKEEMLQSS 127 (599)
Q Consensus 104 ~~f~~~~~~~~~Wl~~~e~~l~~~ 127 (599)
.++...+..+..-|.+.+..+...
T Consensus 795 ~r~~~ei~~l~~qie~l~~~l~~~ 818 (1311)
T TIGR00606 795 ERFQMELKDVERKIAQQAAKLQGS 818 (1311)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccc
Confidence 345666666676666666666643
No 168
>PF13514 AAA_27: AAA domain
Probab=54.63 E-value=4.5e+02 Score=31.55 Aligned_cols=138 Identities=16% Similarity=0.170 Sum_probs=69.9
Q ss_pred CCHHHHHHHHHHHHHHHHhHHhhHHHHHHHHHHHHHHhhccCCCchhHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHH
Q psy12562 132 CKLNELKALKKKHEAFESDLAAHQDRVEQIAAIAQELNTLEYHDSVSVNARCQRICDQ---WDHLGALTQQRRHALDEAE 208 (599)
Q Consensus 132 ~~l~~v~~~l~~h~~~~~el~~~~~~v~~l~~~~~~L~~~~~~~~~~i~~~~~~l~~r---w~~L~~~~~~R~~~L~~~~ 208 (599)
........+..+...++..+......+..+......+.-... .-.....+..|..+ |.....-+..+...+....
T Consensus 239 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~l~~~~~--ll~~~~~I~~L~~~~~~~~~~~~dl~~~~~e~~~~~ 316 (1111)
T PF13514_consen 239 DGAERLEQLEEELAEAQAQLERLQEELAQLEEELDALPVDEE--LLAHAAEIEALEEQRGEYRKARQDLPRLEAELAELE 316 (1111)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHH--HHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455677777777777788888777777777665555422211 01223333333333 3333333333333333322
Q ss_pred HHHHHHHHHHHHHHHhhhhhh-hhhhhhHHHhhHHHHhhcHHHHHHHHHHhHHHHhhHHHHHHHHhHHHHHHHHHH
Q psy12562 209 KILEKIDILHLEFAKRAAPFN-NWLDGTREDLVDMFIVHTMEEIQGLIDAHSQFKATLGEADKEYNSIVNLVREVE 283 (599)
Q Consensus 209 ~~~q~~~~~~~~f~~~~~~l~-~Wl~~~~~~l~~~~~~~~~~~v~~ll~~h~~l~~el~~~~~~~~~~~~l~~~l~ 283 (599)
.... .-+..+. .|-... ...-.+.......+..++..+..+...+......+.........+.
T Consensus 317 ~~~~----------~~~~~lg~~~~~~~--~~~~~~~~~~~~~i~~l~~~~~~l~~~~~~~~~~l~~~~~~~~~~~ 380 (1111)
T PF13514_consen 317 AELR----------ALLAQLGPDWDEED--LEALDPSLAARERIRELLQEREQLEQALAQARRELEEAERELEQLQ 380 (1111)
T ss_pred HHHH----------HHHHhcCCCcccch--hhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2211 1112222 111111 1111122345677888888999888888887776665554444443
No 169
>KOG0998|consensus
Probab=53.85 E-value=15 Score=41.77 Aligned_cols=61 Identities=16% Similarity=0.176 Sum_probs=41.9
Q ss_pred HHHHHHHHhhhCC-CCCcCHHHHhccCCc-chHHHHHHhcCCCCCCCCCCCCccHHHHHHHhhc
Q psy12562 534 EQVIDSFRILAGD-KPYILPDELRRELPP-DQAEYCIQRMPPYKGPNAIPGALDYQSFSTALYG 595 (599)
Q Consensus 534 ~~~~~~F~~~D~d-~G~it~~el~~~l~~-~~~~~~~~~~~~~~d~~~~dg~i~~~eF~~~~~~ 595 (599)
..+..+|...|.+ +|+|+-.+....+.+ ......+...-...++.+ .|.+++++|.-.|+.
T Consensus 283 ~~~~~if~q~d~~~dG~I~s~~~~~~f~~~gl~~~~l~~~w~l~d~~n-~~~ls~~ef~~~~~~ 345 (847)
T KOG0998|consen 283 QKYSKIFSQVDKDNDGSISSNEARNIFLPFGLSKPRLAHVWLLADTQN-TGTLSKDEFALAMHL 345 (847)
T ss_pred HHHHHHHHhccccCCCcccccccccccccCCCChhhhhhhhhhcchhc-cCcccccccchhhhh
Confidence 3456679999999 999999999988743 122222223333346666 899999999877654
No 170
>PRK04863 mukB cell division protein MukB; Provisional
Probab=51.90 E-value=5.6e+02 Score=31.78 Aligned_cols=114 Identities=12% Similarity=0.112 Sum_probs=54.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhHHHhcccCCCCCCCHHHH----HHHHHHHHHHHHhHHhhHHHHHHHHHHHHHHhhc
Q psy12562 96 LERLEHLAQKFKHKADIHEDWTRGKEEMLQSSDFRQCKLNEL----KALKKKHEAFESDLAAHQDRVEQIAAIAQELNTL 171 (599)
Q Consensus 96 l~~l~~l~~~f~~~~~~~~~Wl~~~e~~l~~~~~~~~~l~~v----~~~l~~h~~~~~el~~~~~~v~~l~~~~~~L~~~ 171 (599)
++.+......+...+......+.+.+..+....- .+..+ .........++.++..++..+..+.. ++.+...
T Consensus 357 LeELee~Lee~eeeLeeleeeleeleeEleelEe---eLeeLqeqLaelqqel~elQ~el~q~qq~i~~Le~-~~~~~~~ 432 (1486)
T PRK04863 357 LEELEERLEEQNEVVEEADEQQEENEARAEAAEE---EVDELKSQLADYQQALDVQQTRAIQYQQAVQALER-AKQLCGL 432 (1486)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHhCC
Confidence 3344444445555555555555555544433211 11111 11222333333333334333333332 3444443
Q ss_pred cCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy12562 172 EYHDSVSVNARCQRICDQWDHLGALTQQRRHALDEAEKILEK 213 (599)
Q Consensus 172 ~~~~~~~i~~~~~~l~~rw~~L~~~~~~R~~~L~~~~~~~q~ 213 (599)
..-+...+...+.....+-..+...+..-...+..+......
T Consensus 433 ~~~SdEeLe~~LenF~aklee~e~qL~elE~kL~~lea~leq 474 (1486)
T PRK04863 433 PDLTADNAEDWLEEFQAKEQEATEELLSLEQKLSVAQAAHSQ 474 (1486)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344556677777777777777766666666666555444443
No 171
>PF09069 EF-hand_3: EF-hand; InterPro: IPR015154 Like other EF hand domains, this domain forms a helix-loop-helix motif, though since it does not contain the canonical pattern of calcium binding residues found in many EF hand domains, it does not bind calcium ions. The main function of this domain is the provision of specificity in beta-dystroglycan recognition, though in dystrophin it serves an additional role: stabilisation of the WW domain (IPR001202 from INTERPRO), enhancing dystroglycan binding []. ; PDB: 1EG3_A 1EG4_A.
Probab=51.43 E-value=39 Score=26.44 Aligned_cols=58 Identities=14% Similarity=0.187 Sum_probs=28.0
Q ss_pred HHHHHHHHhhhCCCCCcCHHHHhccCC------------------cchHHHHHHhcCCCCCCCCCCCCccHHHHHHHhhc
Q psy12562 534 EQVIDSFRILAGDKPYILPDELRRELP------------------PDQAEYCIQRMPPYKGPNAIPGALDYQSFSTALYG 595 (599)
Q Consensus 534 ~~~~~~F~~~D~d~G~it~~el~~~l~------------------~~~~~~~~~~~~~~~d~~~~dg~i~~~eF~~~~~~ 595 (599)
++.+.+|+.+...+|.++...|..+|+ +..+..|+... . + ...|+-+.|++-|..
T Consensus 3 dKyRylFslisd~~g~~~~~~l~~lL~d~lqip~~vgE~~aFg~~e~sv~sCF~~~----~--~-~~~I~~~~Fl~wl~~ 75 (90)
T PF09069_consen 3 DKYRYLFSLISDSNGCMDQRKLGLLLHDVLQIPRAVGEGPAFGYIEPSVRSCFQQV----Q--L-SPKITENQFLDWLMS 75 (90)
T ss_dssp HHHHHHHHHHS-TTS-B-HHHHHHHHHHHHHHHHHTT-GGGGT--HHHHHHHHHHT----T--T--S-B-HHHHHHHHHT
T ss_pred HHHHHHHHHHcCCCCCCcHHHHHHHHHHHHHHHHHhCccccccCcHHHHHHHhccc----C--C-CCccCHHHHHHHHHh
Confidence 455666666643366666666666541 12233333332 1 1 457888888888877
Q ss_pred CCC
Q psy12562 596 ESD 598 (599)
Q Consensus 596 ~~~ 598 (599)
+|.
T Consensus 76 ePq 78 (90)
T PF09069_consen 76 EPQ 78 (90)
T ss_dssp --T
T ss_pred CCC
Confidence 764
No 172
>COG1196 Smc Chromosome segregation ATPases [Cell division and chromosome partitioning]
Probab=50.74 E-value=5.3e+02 Score=31.18 Aligned_cols=29 Identities=21% Similarity=0.261 Sum_probs=22.1
Q ss_pred CHHHHHHHHHhhhCC-CCCcCHHHHhccCC
Q psy12562 532 TAEQVIDSFRILAGD-KPYILPDELRRELP 560 (599)
Q Consensus 532 ~~~~~~~~F~~~D~d-~G~it~~el~~~l~ 560 (599)
+...+..+|..+=-. .++.=.+|+-.+|.
T Consensus 1073 sLtAlAllFAi~~~~PaPf~vLDEVDAaLD 1102 (1163)
T COG1196 1073 SLTALALLFAIQKYRPAPFYVLDEVDAALD 1102 (1163)
T ss_pred HHHHHHHHHHHHhhCCCCeeeeccchhhcc
Confidence 345677778888777 88888888888874
No 173
>KOG0998|consensus
Probab=50.32 E-value=9.2 Score=43.55 Aligned_cols=70 Identities=17% Similarity=0.367 Sum_probs=59.9
Q ss_pred CCCHHHHHHHHHHHHhhcCCCCCCcCHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhCCCCCCccchHHHHHHHhh
Q psy12562 449 GITQEQLNEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPNSTGYVHFDAFLDFMTR 525 (599)
Q Consensus 449 ~~~~~~~~~~~~~F~~~d~~~~g~l~~~e~~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~ 525 (599)
.+++.....+..+|...|.+++|.|+..++...+...|. +...+..++...|..+.|.+++.+|+..+..
T Consensus 276 ~vsp~d~~~~~~if~q~d~~~dG~I~s~~~~~~f~~~gl-------~~~~l~~~w~l~d~~n~~~ls~~ef~~~~~~ 345 (847)
T KOG0998|consen 276 KVSPSDKQKYSKIFSQVDKDNDGSISSNEARNIFLPFGL-------SKPRLAHVWLLADTQNTGTLSKDEFALAMHL 345 (847)
T ss_pred ccChHHHHHHHHHHHhccccCCCcccccccccccccCCC-------ChhhhhhhhhhcchhccCcccccccchhhhh
Confidence 577888889999999999999999999999888866443 5567888999999999999999998877643
No 174
>PF10234 Cluap1: Clusterin-associated protein-1; InterPro: IPR019366 This protein of 413 amino acids contains a central coiled-coil domain, possibly the region that binds to clusterin. Cluap1 expression is highest in the nucleus and gradually increases during late S to G2/M phases of the cell cycle and returns to the basal level in the G0/G1 phases. In addition, it is upregulated in colon cancer tissues compared to corresponding non-cancerous mucosa. It thus plays a crucial role in the life of the cell [].
Probab=50.12 E-value=2.4e+02 Score=27.15 Aligned_cols=57 Identities=12% Similarity=0.230 Sum_probs=43.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhh
Q psy12562 179 VNARCQRICDQWDHLGALTQQRRHALDEAEKILEKIDILHLEFAKRAAPFNNWLDGT 235 (599)
Q Consensus 179 i~~~~~~l~~rw~~L~~~~~~R~~~L~~~~~~~q~~~~~~~~f~~~~~~l~~Wl~~~ 235 (599)
+...+..|...=..|...+..|+..|+.+..+++.++.+++-|......++.=|+..
T Consensus 181 ~~~~l~~l~~de~~Le~KIekkk~ELER~qKRL~sLq~vRPAfmdEyEklE~EL~~l 237 (267)
T PF10234_consen 181 TQQQLNNLASDEANLEAKIEKKKQELERNQKRLQSLQSVRPAFMDEYEKLEEELQKL 237 (267)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHH
Confidence 445555666666677888888888898888888888888888888887777766654
No 175
>KOG3958|consensus
Probab=47.73 E-value=2.7e+02 Score=26.96 Aligned_cols=79 Identities=13% Similarity=0.240 Sum_probs=51.3
Q ss_pred CCCCCHHHHHHHHHHHHHHHHh-HHhhHHHHHHHHHHHHHHhhcc--CCCchhHHH---HHHHHHHHHHHHHHHHHHHHH
Q psy12562 129 FRQCKLNELKALKKKHEAFESD-LAAHQDRVEQIAAIAQELNTLE--YHDSVSVNA---RCQRICDQWDHLGALTQQRRH 202 (599)
Q Consensus 129 ~~~~~l~~v~~~l~~h~~~~~e-l~~~~~~v~~l~~~~~~L~~~~--~~~~~~i~~---~~~~l~~rw~~L~~~~~~R~~ 202 (599)
.|.+-++.|+.+..+..++.-. +...+.+++++....+.+.+.. ...-..... .+..+-+||.-+..-+..--.
T Consensus 222 ~~a~vletVe~L~~k~s~l~~~~ld~vEqRL~s~lgK~~~IaEk~~~s~~Da~~d~KV~elye~~qrw~pi~stLP~~V~ 301 (371)
T KOG3958|consen 222 QGACVLETVELLQAKVSALDLAVLDQVEQRLQSVLGKVNEIAEKHKASVEDADTDSKVHELYETIQRWSPIASTLPELVQ 301 (371)
T ss_pred CCchHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHhhccccccchhhhhHHHHHHHHHhhhhHHHhhHHHHH
Confidence 4445668888888888888655 5566888888888888876432 222222333 445566799988887766555
Q ss_pred HHHHH
Q psy12562 203 ALDEA 207 (599)
Q Consensus 203 ~L~~~ 207 (599)
++...
T Consensus 302 rl~al 306 (371)
T KOG3958|consen 302 RLVAL 306 (371)
T ss_pred HHHHH
Confidence 55443
No 176
>PRK10869 recombination and repair protein; Provisional
Probab=47.60 E-value=4.1e+02 Score=28.96 Aligned_cols=44 Identities=7% Similarity=-0.014 Sum_probs=23.3
Q ss_pred HHHHhhhhhHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhHHhh
Q psy12562 111 DIHEDWTRGKEEMLQSSDFRQCKLNELKALKKKHEAFESDLAAH 154 (599)
Q Consensus 111 ~~~~~Wl~~~e~~l~~~~~~~~~l~~v~~~l~~h~~~~~el~~~ 154 (599)
....++|.-.-..+...++.++..+.+....++....+.-....
T Consensus 184 ~~~~d~l~fql~Ei~~~~l~~gE~eeL~~e~~~L~n~e~i~~~~ 227 (553)
T PRK10869 184 AARKQLLQYQLKELNEFAPQPGEFEQIDEEYKRLANSGQLLTTS 227 (553)
T ss_pred HHHHHHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 33345555555555555554456666666666655554433333
No 177
>PF04849 HAP1_N: HAP1 N-terminal conserved region; InterPro: IPR006933 This family is defined by an N-terminal conserved region found in several huntingtin-associated protein 1 (HAP1) homologues. HAP1 binds to huntingtin in a polyglutamine repeat-length-dependent manner. However, its possible role in the pathogenesis of Huntingtons disease is unclear. This family also includes a similar N-terminal conserved region from hypothetical protein products of ALS2CR3 genes found in the human juvenile amyotrophic lateral sclerosis critical region 2q33-2q34 [].
Probab=46.99 E-value=2.9e+02 Score=27.16 Aligned_cols=106 Identities=14% Similarity=0.120 Sum_probs=49.6
Q ss_pred HHHHHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhH
Q psy12562 157 RVEQIAAIAQELNTLEYHDSVSVNARCQRICDQWDHLGALTQQRRHALDEAEKILEKIDILHLEFAKRAAPFNNWLDGTR 236 (599)
Q Consensus 157 ~v~~l~~~~~~L~~~~~~~~~~i~~~~~~l~~rw~~L~~~~~~R~~~L~~~~~~~q~~~~~~~~f~~~~~~l~~Wl~~~~ 236 (599)
.+.--..+|+.|...++. +..+...+........+.+.+-++.|..--...+ |.....+-..--....
T Consensus 77 DLelaA~iGqsLl~~N~~----L~~~~~~le~~L~~~~e~v~qLrHeL~~kdeLL~--------~ys~~~ee~~~~~~~~ 144 (306)
T PF04849_consen 77 DLELAARIGQSLLEQNQD----LSERNEALEEQLGAALEQVEQLRHELSMKDELLQ--------IYSNDDEESEPESSES 144 (306)
T ss_pred hHHHHHHHhHHHHHhccc----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------hcCcHhhhcccccCCC
Confidence 344445566666665543 3455555555555555555555555544444444 3333322111111111
Q ss_pred HHhhHH---HHhhcHHHHHHHHHHhHHHHhhHHHHHHHHhH
Q psy12562 237 EDLVDM---FIVHTMEEIQGLIDAHSQFKATLGEADKEYNS 274 (599)
Q Consensus 237 ~~l~~~---~~~~~~~~v~~ll~~h~~l~~el~~~~~~~~~ 274 (599)
..+... ........+..+.++.+.++.+-...+.+...
T Consensus 145 ~~~~~~~~~~~~~~~~~le~Lq~Klk~LEeEN~~LR~Ea~~ 185 (306)
T PF04849_consen 145 TPLRRNESSLSSQKCIQLEALQEKLKSLEEENEQLRSEASQ 185 (306)
T ss_pred ccccccccccccccchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 111111 11223455667777777777766665544333
No 178
>PRK10361 DNA recombination protein RmuC; Provisional
Probab=45.92 E-value=3.9e+02 Score=28.27 Aligned_cols=159 Identities=13% Similarity=0.177 Sum_probs=0.0
Q ss_pred HHHHHHHHHHhHHHHhhHHHHHHHHhHHHHHHHHHHHHHHhhcCCCCCCCCCCCCChHHHHHHHHHHHHhhHhHhHHHHH
Q psy12562 248 MEEIQGLIDAHSQFKATLGEADKEYNSIVNLVREVESTVQQYQIPGGLENPYTALTANDLTKKWTDVRKLVPQRDTTLQA 327 (599)
Q Consensus 248 ~~~v~~ll~~h~~l~~el~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~w~~L~~~~~~R~~~L~~ 327 (599)
+.....+..+.......+.........+..+..++..+.. ........+..+..+.+.......++...|++
T Consensus 35 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--------~~~~~~~~~~~l~~~le~~~~~~~ek~~~l~~ 106 (475)
T PRK10361 35 LAEREEMVAELSAAKQQITQSEHWRAECELLNNEVRSLQS--------INTSLEADLREVTTRMEAAQQHADDKIRQMIN 106 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_pred HHHhhcchHHHHHHHHHHhchhhhhHHHHHHHHhhhhccC-CCCHHHHHHHH---------------HHHHhhhhccccc
Q psy12562 328 ELRKQQNNETLRRQFAEKANQVGPWIERQMDAVTSIGMGL-QGSLEDQLHRL---------------KEYEQGVYAYKPH 391 (599)
Q Consensus 328 ~l~~~~~~~~l~~~f~~~~~~~~~Wl~e~~~~l~~~~~~~-~~~~e~~~~~~---------------~~~~~ei~~~~~~ 391 (599)
+-.+ |..+|..-++++..==..+-...+...... ...+.+++..+ ..+..+|......
T Consensus 107 ~~~~------L~~~F~~LA~~ile~k~~~f~~~~~~~l~~ll~Pl~e~l~~f~~~v~~~~~~~~~~~~~L~~qi~~L~~~ 180 (475)
T PRK10361 107 SEQR------LSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLAHEIRNLQQL 180 (475)
T ss_pred HHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_pred hHHHHHHHHHHhhcccccCCCccccHHHHHHHHHHHH
Q psy12562 392 IEELEKIHQAVQEGMIFENRYTQYTMETLRVGWEQLL 428 (599)
Q Consensus 392 ~~~l~~~~~~l~~~~~~~~~~~~~~~~~l~~~w~~l~ 428 (599)
-..+..-+..|....-.++ ...-.|.++.
T Consensus 181 n~~i~~ea~nLt~ALkgd~--------K~rG~WGE~q 209 (475)
T PRK10361 181 NAQMAQEAINLTRALKGDN--------KTQGNWGEVV 209 (475)
T ss_pred HHHHHHHHHHHHHHHcCCC--------CcCcchHHHH
No 179
>KOG0516|consensus
Probab=45.80 E-value=5.9e+02 Score=30.34 Aligned_cols=144 Identities=19% Similarity=0.189 Sum_probs=103.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhHHhhHHHHHHHHHHH
Q psy12562 86 EEWLLSEMMRLERLEHLAQKFKHKADIHEDWTRGKEEMLQSSDFRQCKLNELKALKKKHEAFESDLAAHQDRVEQIAAIA 165 (599)
Q Consensus 86 ~~~L~~~~~rl~~l~~l~~~f~~~~~~~~~Wl~~~e~~l~~~~~~~~~l~~v~~~l~~h~~~~~el~~~~~~v~~l~~~~ 165 (599)
...+.++..+...+..++ .+...+....-|+-++...+..-+-....+... ....-+..+..++...+...+.+...+
T Consensus 184 ~~ll~~s~~~~~s~~~l~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~e~~~~~~~~~~~~~~~~n~~~~~~ 261 (1047)
T KOG0516|consen 184 VKLLAEASARLQSLDSLQ-GSVSRASAELMWLFEAREELLQFDWSDRNLNGA-ARSEYSEVLMRELEQLVLRKNDLEVVG 261 (1047)
T ss_pred HHhhhhHHhhccchHHHH-HhHhhhhHhhhhHHHHHHHHhccCChhhhhhHH-HHHHHHHHHHHhhHHHHHHHHHhhccc
Confidence 555666666666666677 666677777778888887766644322222222 444456666777777888888888999
Q ss_pred HHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhHHHh
Q psy12562 166 QELNTLEYHDSVSVNARCQRICDQWDHLGALTQQRRHALDEAEKILEKIDILHLEFAKRAAPFNNWLDGTREDL 239 (599)
Q Consensus 166 ~~L~~~~~~~~~~i~~~~~~l~~rw~~L~~~~~~R~~~L~~~~~~~q~~~~~~~~f~~~~~~l~~Wl~~~~~~l 239 (599)
..+.-..|+....+..-+..+...|......+......+.......+ |..++.....-+......+
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~q~~~~l~~~~~~e~~l~~~~~~~~--------~~~~~~~~~~~~~sl~~~~ 327 (1047)
T KOG0516|consen 262 DQLLLGRHPARISREAYLAALLAQWSIELELEICAERHLKHNAAYFE--------FFEDVRSAEDELASLRDAL 327 (1047)
T ss_pred hHHHhhcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHhh--------hhHHhhhhhHHHHHHhhhh
Confidence 99999999999999999999999999999998888888887766666 6666666555555444433
No 180
>PRK04778 septation ring formation regulator EzrA; Provisional
Probab=45.35 E-value=4.5e+02 Score=28.78 Aligned_cols=130 Identities=19% Similarity=0.135 Sum_probs=67.5
Q ss_pred hhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHhhhhhHHHhcccCC--CCCCCHHHHHHHH
Q psy12562 68 VSDIANAWKGLETSEKSFEEWLLSEMMRLERLEHLA----QKFKHKADIHEDWTRGKEEMLQSSD--FRQCKLNELKALK 141 (599)
Q Consensus 68 ~~~l~~~w~~L~~~~~~r~~~L~~~~~rl~~l~~l~----~~f~~~~~~~~~Wl~~~e~~l~~~~--~~~~~l~~v~~~l 141 (599)
+..|...-+.|......-+........+.+.+.+-+ ..|=.....++.-|...+..+..-. ...+|...+...+
T Consensus 121 ~~~i~~~l~~l~~~e~~nr~~v~~l~~~y~~~rk~ll~~~~~~G~a~~~le~~l~~~e~~f~~f~~l~~~Gd~~~A~e~l 200 (569)
T PRK04778 121 IEQILEELQELLESEEKNREEVEQLKDLYRELRKSLLANRFSFGPALDELEKQLENLEEEFSQFVELTESGDYVEAREIL 200 (569)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccchHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHH
Confidence 344555555665555555555555555444333221 2344555666666666666544311 1123444333333
Q ss_pred HHHH--------------HHHHhHHh-hHHHHHHHHHHHHHHhhccCCCc-hhHHHHHHHHHHHHHHHHHHH
Q psy12562 142 KKHE--------------AFESDLAA-HQDRVEQIAAIAQELNTLEYHDS-VSVNARCQRICDQWDHLGALT 197 (599)
Q Consensus 142 ~~h~--------------~~~~el~~-~~~~v~~l~~~~~~L~~~~~~~~-~~i~~~~~~l~~rw~~L~~~~ 197 (599)
.+.+ .+-.++.. .-..+..|...-++|...|+.-. ..|..++..|..+-......+
T Consensus 201 ~~l~~~~~~l~~~~~~iP~l~~~~~~~~P~ql~el~~gy~~m~~~gy~~~~~~i~~~i~~l~~~i~~~~~~l 272 (569)
T PRK04778 201 DQLEEELAALEQIMEEIPELLKELQTELPDQLQELKAGYRELVEEGYHLDHLDIEKEIQDLKEQIDENLALL 272 (569)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCCCCCCCChHHHHHHHHHHHHHHHHHH
Confidence 3322 22222222 22456666666677877777544 468888888888777644433
No 181
>PF11802 CENP-K: Centromere-associated protein K; InterPro: IPR020993 Cenp-K is one of seven new Cenp-A-nucleosome distal (CAD) centromere components (the others being Cenp-L, Cenp-O, Cenp-P, Cenp-Q, Cenp-R and Cenp-S) that are identified as assembling on the Cenp-A nucleosome associated complex, NAC []. The Cenp-A NAC is essential, as disruption of the complex causes errors of chromosome alignment and segregation that preclude cell survival despite continued centromere-derived mitotic checkpoint signalling. Cenp-K is centromere-associated through its interaction with one or more components of the Cenp-A NAC.; GO: 0005634 nucleus
Probab=44.80 E-value=2.9e+02 Score=26.50 Aligned_cols=121 Identities=12% Similarity=0.094 Sum_probs=74.1
Q ss_pred HHHHHHHHhhhhhHHHhcccCC--CCCCCHHHHHHHHHHHHHHHHhHHhhHHHHHHHHHHHHHHhhccCCCchhHHHHHH
Q psy12562 107 KHKADIHEDWTRGKEEMLQSSD--FRQCKLNELKALKKKHEAFESDLAAHQDRVEQIAAIAQELNTLEYHDSVSVNARCQ 184 (599)
Q Consensus 107 ~~~~~~~~~Wl~~~e~~l~~~~--~~~~~l~~v~~~l~~h~~~~~el~~~~~~v~~l~~~~~~L~~~~~~~~~~i~~~~~ 184 (599)
...|.++..=|.+.+..|...+ +.+.+-..+.-++.+.+.+.+|+...+.+.-.|...-..++- ......++
T Consensus 22 ~~eCEe~wk~me~~q~kL~l~~~e~l~~s~~ql~ll~~~~k~L~aE~~qwqk~~peii~~n~~VL~------~lgkeelq 95 (268)
T PF11802_consen 22 IKECEELWKDMEECQNKLSLIGTETLTDSDAQLSLLMMRVKCLTAELEQWQKRTPEIIPLNPEVLL------TLGKEELQ 95 (268)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCCCCCCcchhHHHHHHHHHHHHHHHHHHHhcCCCcCCCCHHHHH------HHHHHHHH
Confidence 3555555566666666655432 222333455667777888888888887765544433222111 22456778
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhHHHhh
Q psy12562 185 RICDQWDHLGALTQQRRHALDEAEKILEKIDILHLEFAKRAAPFNNWLDGTREDLV 240 (599)
Q Consensus 185 ~l~~rw~~L~~~~~~R~~~L~~~~~~~q~~~~~~~~f~~~~~~l~~Wl~~~~~~l~ 240 (599)
.+....+-+...++.+...|...+.+-+. +.....++..=|......+.
T Consensus 96 kl~~eLe~vLs~~q~KnekLke~LerEq~-------wL~Eqqql~~sL~~r~~elk 144 (268)
T PF11802_consen 96 KLISELEMVLSTVQSKNEKLKEDLEREQQ-------WLDEQQQLLESLNKRHEELK 144 (268)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHH
Confidence 88888888888999999999998888874 44444444444444333333
No 182
>KOG4807|consensus
Probab=43.65 E-value=3.6e+02 Score=27.19 Aligned_cols=181 Identities=15% Similarity=0.229 Sum_probs=81.2
Q ss_pred CCHHHHHHHHHHHH-HHHHhHHhhHHHHHHHHHHHHHHhhccCCCchhHHHHHHHHHHHHHH-------HHHHHHHHHHH
Q psy12562 132 CKLNELKALKKKHE-AFESDLAAHQDRVEQIAAIAQELNTLEYHDSVSVNARCQRICDQWDH-------LGALTQQRRHA 203 (599)
Q Consensus 132 ~~l~~v~~~l~~h~-~~~~el~~~~~~v~~l~~~~~~L~~~~~~~~~~i~~~~~~l~~rw~~-------L~~~~~~R~~~ 203 (599)
.+..++++.-+.|. .++.|+...+ +|+.....|....-.+-..++..++.|.+.|.. |-..++.++..
T Consensus 382 ATiSAIEAMKnAhrEEmeRELeKsq----SvnsdveaLRrQyleelqsvqRELeVLSEQYSQKCLEnahLaqalEaerqa 457 (593)
T KOG4807|consen 382 ATISAIEAMKNAHREEMERELEKSQ----SVNSDVEALRRQYLEELQSVQRELEVLSEQYSQKCLENAHLAQALEAERQA 457 (593)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHhhh----ccccChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35555555544432 3344443322 333333333222222334455555555555533 34444555555
Q ss_pred HHHHHHHHH----HHHHHHHHHHHhhhhhhhhhhhhHHHhhHH-HHhhcHHHHHHHHHHhHHHHhhHHHHHHHHhHHHHH
Q psy12562 204 LDEAEKILE----KIDILHLEFAKRAAPFNNWLDGTREDLVDM-FIVHTMEEIQGLIDAHSQFKATLGEADKEYNSIVNL 278 (599)
Q Consensus 204 L~~~~~~~q----~~~~~~~~f~~~~~~l~~Wl~~~~~~l~~~-~~~~~~~~v~~ll~~h~~l~~el~~~~~~~~~~~~l 278 (599)
|.....--| .+..+-..+...+..+...|..-----.++ ..|.|.-+++.+++-. +.+|.-..+ .|..+
T Consensus 458 LRqCQrEnQELnaHNQELnnRLaaEItrLRtlltgdGgGtGsplaqgkdayELEVLLRVK---EsEiQYLKq---EissL 531 (593)
T KOG4807|consen 458 LRQCQRENQELNAHNQELNNRLAAEITRLRTLLTGDGGGTGSPLAQGKDAYELEVLLRVK---ESEIQYLKQ---EISSL 531 (593)
T ss_pred HHHHHHhhHHHHHHHHHHhhHHHHHHHHHHHHhccCCCCCCCccccCcchhhHHHHHHhh---HHHHHHHHH---HHHHH
Confidence 544332222 122233334444444444443321111111 2244555566665543 356666564 34455
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCCCChHHHHHHHHHHHHhhHhHhHHHHHHHH
Q psy12562 279 VREVESTVQQYQIPGGLENPYTALTANDLTKKWTDVRKLVPQRDTTLQAELR 330 (599)
Q Consensus 279 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~w~~L~~~~~~R~~~L~~~l~ 330 (599)
.++|..... +.+|......++-.-..-....+..--.+|.+.+.
T Consensus 532 kDELQtalr--------DKkyaSdKYkDiYtELSiaKakadcdIsrLKEqLk 575 (593)
T KOG4807|consen 532 KDELQTALR--------DKKYASDKYKDIYTELSIAKAKADCDISRLKEQLK 575 (593)
T ss_pred HHHHHHHHh--------hhhccccchhHHHHHHHHHHHhhhccHHHHHHHHH
Confidence 566655555 67777666666655554444444444444444333
No 183
>cd07316 terB_like_DjlA N-terminal tellurium resistance protein terB-like domain of heat shock DnaJ-like proteins. Tellurium resistance terB-like domain of the DnaJ-like DjlA proteins. This family represents the terB-like domain of DjlA-like proteins, a subgroup of heat shock DnaJ-like proteins. Escherichia coli DjlA is a type III membrane protein with a small N-terminal transmembrane region and DnaJ-like domain on the extreme C-terminus. Overproduction has been shown to activate the RcsC pathway, which regulates the production of the capsular exopolysaccharide colanic acid. The specific function of this domain is unknown.
Probab=42.89 E-value=94 Score=24.79 Aligned_cols=43 Identities=9% Similarity=0.077 Sum_probs=21.7
Q ss_pred cchHHHHHHHhhhcC-CCCCHHHHHHHHHhhhCCCCCcCHHHHh
Q psy12562 514 VHFDAFLDFMTREST-DTDTAEQVIDSFRILAGDKPYILPDELR 556 (599)
Q Consensus 514 I~~~eF~~~~~~~~~-~~~~~~~~~~~F~~~D~d~G~it~~el~ 556 (599)
.++.+|...+...+. .+.....+..+.-...--||.++..|-.
T Consensus 53 ~~~~~~~~~l~~~~~~~~~~r~~~l~~l~~vA~ADG~~~~~E~~ 96 (106)
T cd07316 53 FGLEEYARQFRRACGGRPELLLQLLEFLFQIAYADGELSEAERE 96 (106)
T ss_pred CCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHcCCCCHHHHH
Confidence 677888777665331 2122223333222222227888887754
No 184
>PF05600 DUF773: Protein of unknown function (DUF773); InterPro: IPR008491 This family contains several eukaryotic sequences which are thought to be CDK5 activator-binding proteins, however, the function of this family is unknown.
Probab=42.23 E-value=2.9e+02 Score=29.66 Aligned_cols=115 Identities=17% Similarity=0.263 Sum_probs=73.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhHHHhhHHHHhhcHHHHHHHHHHhHHHHhhHH
Q psy12562 187 CDQWDHLGALTQQRRHALDEAEKILEKIDILHLEFAKRAAPFNNWLDGTREDLVDMFIVHTMEEIQGLIDAHSQFKATLG 266 (599)
Q Consensus 187 ~~rw~~L~~~~~~R~~~L~~~~~~~q~~~~~~~~f~~~~~~l~~Wl~~~~~~l~~~~~~~~~~~v~~ll~~h~~l~~el~ 266 (599)
-..|..+..+.+.-.-.|.++-....+ .+.-.++.++.++.+.+....++.
T Consensus 94 mk~W~~Iv~~yeK~n~~L~E~a~~L~r-----------------------------~v~YeIP~lkKqi~k~~q~~~d~~ 144 (507)
T PF05600_consen 94 MKDWQEIVKLYEKDNLYLAEAAQILVR-----------------------------NVNYEIPALKKQIAKCQQQLEDLD 144 (507)
T ss_pred HHHHHHHHHHHHhccchHHHHHHHHHH-----------------------------HhcccchHHHHHHHHHHHHHHHHH
Confidence 457888887777666666664443331 334466777788888777777776
Q ss_pred HHHHHHh-HHHHHHHHHHHHHHhhcCCCCCCCCCCCC----ChHHHHHHHHHHHHhhHhHhHHHHHHHHhhcchHHHHHH
Q psy12562 267 EADKEYN-SIVNLVREVESTVQQYQIPGGLENPYTAL----TANDLTKKWTDVRKLVPQRDTTLQAELRKQQNNETLRRQ 341 (599)
Q Consensus 267 ~~~~~~~-~~~~l~~~l~~~~~~~~~~~~~~~~~~~~----~~~~l~~~w~~L~~~~~~R~~~L~~~l~~~~~~~~l~~~ 341 (599)
....++. .......+....|..++..+ ..+.. .+..|-..+..+...+ ..|..+++ +|..
T Consensus 145 kk~~e~~~~~~~~~~~~~~~c~~lGI~G----~nir~ELl~l~~~LP~~~~~i~~~i----~~l~~aie-------~Y~~ 209 (507)
T PF05600_consen 145 KKEEELQRSAAEARERYKKACKQLGIKG----ENIREELLELVKELPSLFDEIVEAI----SDLQEAIE-------YYQA 209 (507)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhCCcc----chhHHHHHHHHHhhHHHHHHHHHHH----HHHHHHHH-------HHHH
Confidence 6665544 44455566667777777633 23333 3466666777777777 33888888 7887
Q ss_pred HHHH
Q psy12562 342 FAEK 345 (599)
Q Consensus 342 f~~~ 345 (599)
|..-
T Consensus 210 f~~~ 213 (507)
T PF05600_consen 210 FVEF 213 (507)
T ss_pred HHHH
Confidence 7764
No 185
>KOG4347|consensus
Probab=41.08 E-value=27 Score=37.40 Aligned_cols=58 Identities=17% Similarity=0.151 Sum_probs=47.2
Q ss_pred HHHHHHHHhhcCCCCCCcCHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhCCCCCCccchHHH
Q psy12562 456 NEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPNSTGYVHFDAF 519 (599)
Q Consensus 456 ~~~~~~F~~~d~~~~g~l~~~e~~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF 519 (599)
--+..+|+.+|.+++|.|++.+|..++..+...- ....+.-+|..+|++++ ..+-++-
T Consensus 555 ~~~~rlF~l~D~s~~g~Ltf~~lv~gL~~l~~~~-----~~ek~~l~y~lh~~p~~-~~d~e~~ 612 (671)
T KOG4347|consen 555 IFLERLFRLLDDSMTGLLTFKDLVSGLSILKAGD-----ALEKLKLLYKLHDPPAD-ELDREEV 612 (671)
T ss_pred HHHHHHHHhcccCCcceeEHHHHHHHHHHHHhhh-----HHHHHHHHHhhccCCcc-ccccccc
Confidence 4468899999999999999999999997765433 44566778999999988 7777776
No 186
>PF05042 Caleosin: Caleosin related protein; InterPro: IPR007736 This family contains plant proteins related to caleosin. Caleosins contain calcium-binding domains and have an oleosin-like association with lipid bodies. Caleosins are present at relatively low levels and are mainly bound to microsomal membrane fractions at the early stages of seed development. As the seeds mature, overall levels of caleosins increased dramatically and they were associated almost exclusively with storage lipid bodies []. The calcium binding domain is probably related to the calcium-binding EF-hands motif IPR002048 from INTERPRO.
Probab=39.78 E-value=1.2e+02 Score=27.00 Aligned_cols=67 Identities=10% Similarity=0.178 Sum_probs=42.6
Q ss_pred HHHHHHHHhhcCCCCCCcCHHHHHHHHHHcCCCCCCCC--CCHHHHHHHHHHhCCCCCCccchHHHHHHH
Q psy12562 456 NEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDR--QGEIDFQRILAVVDPNSTGYVHFDAFLDFM 523 (599)
Q Consensus 456 ~~~~~~F~~~d~~~~g~l~~~e~~~~l~~~g~~~~~~~--~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~ 523 (599)
+++.++|..+++.+.+.|+..|+..+++.--...+.-+ .+..+...++... .+.+|.+..+....++
T Consensus 96 ~kFe~iF~kya~~~~d~LT~~E~~~m~~~nr~~~D~~GW~a~~~EW~~~y~L~-~d~dG~l~Ke~iR~vY 164 (174)
T PF05042_consen 96 QKFEEIFSKYAKTGPDALTLRELWRMLKGNRNANDPFGWFAAFFEWGALYILA-KDKDGFLSKEDIRGVY 164 (174)
T ss_pred HHHHHHHHHhCCCCCCCcCHHHHHHHHHhccccCCcchhhhhhhHHHHHHHHH-cCcCCcEeHHHHhhhc
Confidence 78999999999988899999999999876322110000 0222223333333 3567788777766554
No 187
>smart00787 Spc7 Spc7 kinetochore protein. This domain is found in cell division proteins which are required for kinetochore-spindle association.
Probab=38.96 E-value=4e+02 Score=26.46 Aligned_cols=25 Identities=4% Similarity=0.243 Sum_probs=18.3
Q ss_pred HHHHHHHHHHHHHhhhhhHHHhccc
Q psy12562 102 LAQKFKHKADIHEDWTRGKEEMLQS 126 (599)
Q Consensus 102 l~~~f~~~~~~~~~Wl~~~e~~l~~ 126 (599)
++.-|...|.++..||.+-...+..
T Consensus 64 ~LElY~~sC~EL~~~I~egr~~~~~ 88 (312)
T smart00787 64 LLELYQFSCKELKKYISEGRDLFKE 88 (312)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3447888899999998877665544
No 188
>PRK10869 recombination and repair protein; Provisional
Probab=38.75 E-value=5.5e+02 Score=27.96 Aligned_cols=23 Identities=13% Similarity=0.111 Sum_probs=11.7
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHH
Q psy12562 177 VSVNARCQRICDQWDHLGALTQQ 199 (599)
Q Consensus 177 ~~i~~~~~~l~~rw~~L~~~~~~ 199 (599)
..+.......-.+|..+...+..
T Consensus 153 ~~~~~~~~~~y~~~~~~~~~l~~ 175 (553)
T PRK10869 153 TSLLQEMRAAYQLWHQSCRDLAQ 175 (553)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 34555555555555555544433
No 189
>PF10498 IFT57: Intra-flagellar transport protein 57 ; InterPro: IPR019530 Eukaryotic cilia and flagella are specialised organelles found at the periphery of cells of diverse organisms. Intra-flagellar transport (IFT) is required for the assembly and maintenance of eukaryotic cilia and flagella, and consists of the bi-directional movement of large protein particles between the base and the distal tip of the organelle. IFT particles contain multiple copies of two distinct protein complexes, A and B, which contain at least 6 and 11 protein subunits. IFT57 is part of complex B but is not, however, required for the core subunits to stay associated []. This protein is known as Huntington-interacting protein-1 in humans.
Probab=38.07 E-value=3.8e+02 Score=27.22 Aligned_cols=16 Identities=6% Similarity=0.210 Sum_probs=6.9
Q ss_pred HHHHHHHhHHhhHHHH
Q psy12562 143 KHEAFESDLAAHQDRV 158 (599)
Q Consensus 143 ~h~~~~~el~~~~~~v 158 (599)
....+..||..+.-++
T Consensus 336 Al~kLk~EI~qMdvrI 351 (359)
T PF10498_consen 336 ALTKLKQEIKQMDVRI 351 (359)
T ss_pred HHHHHHHHHHHhhhhh
Confidence 3344444444444333
No 190
>COG3883 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=37.83 E-value=3.8e+02 Score=25.80 Aligned_cols=72 Identities=15% Similarity=0.322 Sum_probs=43.0
Q ss_pred HHHHHHHHHHHHHhHHhhHHHHHHHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy12562 137 LKALKKKHEAFESDLAAHQDRVEQIAAIAQELNTLEYHDSVSVNARCQRICDQWDHLGALTQQRRHALDEAEKILE 212 (599)
Q Consensus 137 v~~~l~~h~~~~~el~~~~~~v~~l~~~~~~L~~~~~~~~~~i~~~~~~l~~rw~~L~~~~~~R~~~L~~~~~~~q 212 (599)
+.........++.+|.+....|..+....+.+-. ....+...+..+...-..+...+..|...|.......+
T Consensus 40 l~~~~~~~~~~q~ei~~L~~qi~~~~~k~~~~~~----~i~~~~~eik~l~~eI~~~~~~I~~r~~~l~~raRAmq 111 (265)
T COG3883 40 LSELQKEKKNIQNEIESLDNQIEEIQSKIDELQK----EIDQSKAEIKKLQKEIAELKENIVERQELLKKRARAMQ 111 (265)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4444445555555566555555555555444433 33456666677777777777777777777776555444
No 191
>KOG1955|consensus
Probab=36.02 E-value=46 Score=34.36 Aligned_cols=56 Identities=16% Similarity=0.268 Sum_probs=40.7
Q ss_pred HHHHHhCCCCCCccchHHHHHHHhhhcCCCCCHHHHHHHHHhhhCC-CCCcCHHHHhccC
Q psy12562 501 RILAVVDPNSTGYVHFDAFLDFMTRESTDTDTAEQVIDSFRILAGD-KPYILPDELRREL 559 (599)
Q Consensus 501 ~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~~F~~~D~d-~G~it~~el~~~l 559 (599)
.-|+.+-+|.+|.|+-.--..++.+ ....-+++..+|...|.| ||-+|..||-.+|
T Consensus 235 nQFrtvQpDp~gfisGsaAknFFtK---Sklpi~ELshIWeLsD~d~DGALtL~EFcAAf 291 (737)
T KOG1955|consen 235 NQFRTVQPDPHGFISGSAAKNFFTK---SKLPIEELSHIWELSDVDRDGALTLSEFCAAF 291 (737)
T ss_pred hhhhcccCCcccccccHHHHhhhhh---ccCchHHHHHHHhhcccCccccccHHHHHhhH
Confidence 3456666777787776655555543 234457889999999999 9999999997765
No 192
>COG0497 RecN ATPase involved in DNA repair [DNA replication, recombination, and repair]
Probab=35.91 E-value=6e+02 Score=27.53 Aligned_cols=241 Identities=10% Similarity=0.106 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHhHHhhHHHHHHHHHHHHHHhhccCCCchhHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy12562 139 ALKKKHEAFESDLAAHQDRVEQIAAIAQELNTLEYHDSVSVNAR-CQRICDQWDHLGALTQQRRHALDEAEKILEKIDIL 217 (599)
Q Consensus 139 ~~l~~h~~~~~el~~~~~~v~~l~~~~~~L~~~~~~~~~~i~~~-~~~l~~rw~~L~~~~~~R~~~L~~~~~~~q~~~~~ 217 (599)
..++..-..--+|.+......-+....+.-.=..+......... +...-+.|..+...+..++..-.+..+....+.--
T Consensus 114 ~~L~~l~~~Li~IHGQh~~q~Ll~~~~~r~lLD~f~~~~~~~~~~~~~~y~~w~~~~~~l~~~~~~~~e~~~~~d~L~fq 193 (557)
T COG0497 114 AQLKELGQLLIDIHGQHEHQSLLKPELQRQLLDAFAGLEELAQEAYQEAYQAWKQARRELEDLQEKERERAQRADLLQFQ 193 (557)
T ss_pred HHHHHHHHhhheeeccchHHHhcChHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_pred HHH-------------------HHHhhhhhhhhhhhhHHHhhHHHHhhcHHHHHHHHHHhHHHHhhHHHHHHHHhHHHHH
Q psy12562 218 HLE-------------------FAKRAAPFNNWLDGTREDLVDMFIVHTMEEIQGLIDAHSQFKATLGEADKEYNSIVNL 278 (599)
Q Consensus 218 ~~~-------------------f~~~~~~l~~Wl~~~~~~l~~~~~~~~~~~v~~ll~~h~~l~~el~~~~~~~~~~~~l 278 (599)
..+ -......+..=+......|.. ..+..++..++..-.....++..+.+.+..+...
T Consensus 194 ~~Ele~~~l~~gE~e~L~~e~~rLsn~ekl~~~~~~a~~~L~g---e~~~~~~~~~l~~a~~~l~~~~~~d~~l~~~~~~ 270 (557)
T COG0497 194 LEELEELNLQPGEDEELEEERKRLSNSEKLAEAIQNALELLSG---EDDTVSALSLLGRALEALEDLSEYDGKLSELAEL 270 (557)
T ss_pred HHHHHhcCCCCchHHHHHHHHHHHhhHHHHHHHHHHHHHHHhC---CCCchhHHHHHHHHHHHHHHhhccChhHHHHHHH
Q ss_pred HHHHHHHHHhhcCCCCCCCCCCCCChHHHHHHHHHHHHhhHhHhHHHHHHHHhhcchHHHHHHHHHHhchhhhhHHHHHH
Q psy12562 279 VREVESTVQQYQIPGGLENPYTALTANDLTKKWTDVRKLVPQRDTTLQAELRKQQNNETLRRQFAEKANQVGPWIERQMD 358 (599)
Q Consensus 279 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~w~~L~~~~~~R~~~L~~~l~~~~~~~~l~~~f~~~~~~~~~Wl~e~~~ 358 (599)
....-..+. .+...-.+....+..=-..|++...|......+..+|.....++..|..+...
T Consensus 271 l~ea~~~l~------------------ea~~el~~~~~~le~Dp~~L~~ve~Rl~~L~~l~RKY~~~~~~l~~~~~~~~~ 332 (557)
T COG0497 271 LEEALYELE------------------EASEELRAYLDELEFDPNRLEEVEERLFALKSLARKYGVTIEDLLEYLDKIKE 332 (557)
T ss_pred HHHHHHHHH------------------HHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHH
Q ss_pred HHhhhhccCCCCHHHHHHHHHHHHhhhhccccchHHHHHHHHH
Q psy12562 359 AVTSIGMGLQGSLEDQLHRLKEYEQGVYAYKPHIEELEKIHQA 401 (599)
Q Consensus 359 ~l~~~~~~~~~~~e~~~~~~~~~~~ei~~~~~~~~~l~~~~~~ 401 (599)
.+...+ +....++.+-++...+..++......+......+..
T Consensus 333 el~~L~-~~~~~~~~Le~~~~~l~~~~~~~A~~Ls~~R~~~A~ 374 (557)
T COG0497 333 ELAQLD-NSEESLEALEKEVKKLKAELLEAAEALSAIRKKAAK 374 (557)
T ss_pred HHHHhh-hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
No 193
>PF00404 Dockerin_1: Dockerin type I repeat; InterPro: IPR018242 Gram-positive, thermophilic anaerobes such as Clostridium thermocellum or Clostridium cellulolyticum secretes a highly active and thermostable cellulase complex (cellulosome) responsible for the degradation of crystalline cellulose [, ]. The cellulosome contains at least 30 polypeptides, the majority of the enzymes are endoglucanases (3.2.1.4 from EC), but there are also some xylanases (3.2.1.8 from EC), beta-glucosidases (3.2.1.21 from EC) and endo-beta-1,3-1,4-glucanases (3.2.1.73 from EC). Complete sequence data for many of these enzymes has been obtained. A majority of these proteins contain a highly conserved type I dockerin domain of about 65 to 70 residues, which is generally (but not always) located in the C terminus. The dockerin domain is the binding partner of the cohesin domain (see IPR002102 from INTERPRO). The cohesin-dockerin interaction is the crucial interaction for complex formation in the cellulosome []. The dockerin domain contains a tandem repeat of two calcium-binding loop-helix motifs (distinct from EF-hand Ca-binding motifs). These motifs are about 24 amino acids in length. This entry represents these repeated Ca-binding motifs.; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3P0D_J 1OHZ_B 2CCL_B 1DAV_A 1DAQ_A 2VN5_B 2VN6_B.
Probab=35.53 E-value=51 Score=17.94 Aligned_cols=18 Identities=17% Similarity=0.207 Sum_probs=13.7
Q ss_pred cCCCCCCcCHHHHHHHHH
Q psy12562 466 DKNRTGRLAPEEFKSCLV 483 (599)
Q Consensus 466 d~~~~g~l~~~e~~~~l~ 483 (599)
|.|++|.++.-++..+-+
T Consensus 1 DvN~DG~vna~D~~~lk~ 18 (21)
T PF00404_consen 1 DVNGDGKVNAIDLALLKK 18 (21)
T ss_dssp -TTSSSSSSHHHHHHHHH
T ss_pred CCCCCCcCCHHHHHHHHH
Confidence 568999999988876644
No 194
>PLN02228 Phosphoinositide phospholipase C
Probab=35.27 E-value=70 Score=34.53 Aligned_cols=68 Identities=19% Similarity=0.333 Sum_probs=48.9
Q ss_pred CCCCHHHHHHHHHHhCCCCCCccchHHHHHHHhhhcCCC-CCHHHHHHHHHhhhCC-----CCCcCHHHHhccCCc
Q psy12562 492 DRQGEIDFQRILAVVDPNSTGYVHFDAFLDFMTRESTDT-DTAEQVIDSFRILAGD-----KPYILPDELRRELPP 561 (599)
Q Consensus 492 ~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~-~~~~~~~~~F~~~D~d-----~G~it~~el~~~l~~ 561 (599)
..+...++..+|..+..+ +.++.++|..++...-... .+.+.+..+|..|... .|.++.+.|..+|..
T Consensus 19 ~~~~~~ei~~if~~~s~~--~~~t~~~~~~FL~~~Q~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~gF~~yl~s 92 (567)
T PLN02228 19 TREPPVSIKRLFEAYSRN--GKMSFDELLRFVSEVQGERHAGLDYVQDIFHSVKHHNVFHHHGLVHLNAFYRYLFS 92 (567)
T ss_pred CCCCcHHHHHHHHHhcCC--CccCHHHHHHHHHHhcCCccCCHHHHHHHHHHhccchhhcccCccCHHHHHHHhcC
Confidence 355788999999988643 5799999999987643322 3456677777777532 467999999888743
No 195
>KOG0516|consensus
Probab=34.52 E-value=8.7e+02 Score=28.99 Aligned_cols=167 Identities=13% Similarity=0.012 Sum_probs=97.2
Q ss_pred HHHhhhhhhhhhhhhHHHhhHHHHhh-cHHHHHHHHHHhHHHHhhHHHHHHHHhHHHHHHHHHHHHHHhhcCCCCCCCCC
Q psy12562 221 FAKRAAPFNNWLDGTREDLVDMFIVH-TMEEIQGLIDAHSQFKATLGEADKEYNSIVNLVREVESTVQQYQIPGGLENPY 299 (599)
Q Consensus 221 f~~~~~~l~~Wl~~~~~~l~~~~~~~-~~~~v~~ll~~h~~l~~el~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~ 299 (599)
+...+..-..|+-.....+...+... ..... ....-+..+...++........+...+..+.-. .+ .....
T Consensus 203 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~e~~~~~~~~~~~~~~~~n~~~~~~~~~~~~---~~----~~~~~ 274 (1047)
T KOG0516|consen 203 SVSRASAELMWLFEAREELLQFDWSDRNLNGA-ARSEYSEVLMRELEQLVLRKNDLEVVGDQLLLG---RH----PARIS 274 (1047)
T ss_pred hHhhhhHhhhhHHHHHHHHhccCChhhhhhHH-HHHHHHHHHHHhhHHHHHHHHHhhccchHHHhh---cc----cchhh
Confidence 55666666677777655544432211 11111 222233333444444443333333333322111 11 12344
Q ss_pred CCCChHHHHHHHHHHHHhhHhHhHHHHHHHHhhcchHHHHHHHHHHhchhhhhHHHHHHHHhhhhccC----CCCHHHHH
Q psy12562 300 TALTANDLTKKWTDVRKLVPQRDTTLQAELRKQQNNETLRRQFAEKANQVGPWIERQMDAVTSIGMGL----QGSLEDQL 375 (599)
Q Consensus 300 ~~~~~~~l~~~w~~L~~~~~~R~~~L~~~l~~~~~~~~l~~~f~~~~~~~~~Wl~e~~~~l~~~~~~~----~~~~e~~~ 375 (599)
+...+..+...|......+......+..... +.+|+.++.....-+......+.....+. ......++
T Consensus 275 ~~~~~~~~~~q~~~~l~~~~~~e~~l~~~~~--------~~~~~~~~~~~~~~~~sl~~~~~~k~~~~~~~~~~~~~~l~ 346 (1047)
T KOG0516|consen 275 REAYLAALLAQWSIELELEICAERHLKHNAA--------YFEFFEDVRSAEDELASLRDALDEKYSPDRSSSLLRLLDLL 346 (1047)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhHH--------HhhhhHHhhhhhHHHHHHhhhhhhhccCCccccchhhhhhc
Confidence 5556788999999999999999999988877 77799999988887777766665333221 23444455
Q ss_pred HHHHHHHhhhhccccchHHHHHHHHHHh
Q psy12562 376 HRLKEYEQGVYAYKPHIEELEKIHQAVQ 403 (599)
Q Consensus 376 ~~~~~~~~ei~~~~~~~~~l~~~~~~l~ 403 (599)
.........+..+...+..+........
T Consensus 347 ~e~~~~~~~~~~~~~~~~~l~~~~~~~~ 374 (1047)
T KOG0516|consen 347 PEEEKEKCVLPNQFEEVRGLQGKERVGV 374 (1047)
T ss_pred hHHHHHHHhhhhHHHHHHHHHhhhhccc
Confidence 6666666667776666766666666665
No 196
>KOG0039|consensus
Probab=34.39 E-value=47 Score=36.81 Aligned_cols=77 Identities=16% Similarity=0.232 Sum_probs=53.4
Q ss_pred CCccchHHHHHHHhhhcCCCCCHHHHHHHHHhhhCCCCCcCHHHHhccC-----------CcchHHHHHHhcCCCCCCCC
Q psy12562 511 TGYVHFDAFLDFMTRESTDTDTAEQVIDSFRILAGDKPYILPDELRREL-----------PPDQAEYCIQRMPPYKGPNA 579 (599)
Q Consensus 511 ~g~I~~~eF~~~~~~~~~~~~~~~~~~~~F~~~D~d~G~it~~el~~~l-----------~~~~~~~~~~~~~~~~d~~~ 579 (599)
+| |++++|. .......+.++-.|.++|..+|.++.+++..++ ..+....+...+....+++.
T Consensus 2 ~~-~~~~~~~------~~~~~~d~~l~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (646)
T KOG0039|consen 2 EG-ISFQELK------ITDCSYDDKLQTFFDMYDKGDGKLTEEEVRELIMSSISANWLSLIKKQTEEYAALIMEELDPDH 74 (646)
T ss_pred CC-cchhhhc------ccCCChhHHHHHHHHHHhhhcCCccHHHHHHHHHHHHHhhhhhhhhhhhhHHHHHhhhhccccc
Confidence 46 8888888 223455678888999999888999999988865 13445555556666666665
Q ss_pred CCCCccHHHHHHHhhc
Q psy12562 580 IPGALDYQSFSTALYG 595 (599)
Q Consensus 580 ~dg~i~~~eF~~~~~~ 595 (599)
.|.+.+.++...+..
T Consensus 75 -~~y~~~~~~~~ll~~ 89 (646)
T KOG0039|consen 75 -KGYITNEDLEILLLQ 89 (646)
T ss_pred -cceeeecchhHHHHh
Confidence 667777776665543
No 197
>PF12325 TMF_TATA_bd: TATA element modulatory factor 1 TATA binding; InterPro: IPR022091 This is the C-terminal conserved coiled coil region of a family of TATA element modulatory factor 1 proteins conserved in eukaryotes []. The proteins bind to the TATA element of some RNA polymerase II promoters and repress their activity. by competing with the binding of TATA binding protein. TMF1_TATA_bd is the most conserved part of the TMFs []. TMFs are evolutionarily conserved golgins that bind Rab6, a ubiquitous ras-like GTP-binding Golgi protein, and contribute to Golgi organisation in animal [] and plant cells. The Rab6-binding domain appears to be the same region as this C-terminal family [].
Probab=34.33 E-value=2.7e+02 Score=23.15 Aligned_cols=39 Identities=10% Similarity=0.104 Sum_probs=26.2
Q ss_pred HhhcHHHHHHHHHHhHHHHhhHHHHHHHHhHHHHHHHHH
Q psy12562 244 IVHTMEEIQGLIDAHSQFKATLGEADKEYNSIVNLVREV 282 (599)
Q Consensus 244 ~~~~~~~v~~ll~~h~~l~~el~~~~~~~~~~~~l~~~l 282 (599)
.|.+...+..+-...+.++.++...+.++..+......+
T Consensus 11 ~~~~~~~ve~L~s~lr~~E~E~~~l~~el~~l~~~r~~l 49 (120)
T PF12325_consen 11 GGPSVQLVERLQSQLRRLEGELASLQEELARLEAERDEL 49 (120)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345566677777777777788888777776665555444
No 198
>TIGR00606 rad50 rad50. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=33.05 E-value=1e+03 Score=29.31 Aligned_cols=117 Identities=12% Similarity=0.082 Sum_probs=56.5
Q ss_pred HHHHHHHHhHHhHHhcCCCCCCCCCCCchhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Q psy12562 40 KLETNFNTLQTKLRLSNRPAYMPTEGKMVSDIANAWKGLETSEKSFEEWLLSEMMRLERLEHLAQKFKHKADIHEDWTRG 119 (599)
Q Consensus 40 ~le~~l~~~~~~l~~~~~~~~~~~~~~~~~~l~~~w~~L~~~~~~r~~~L~~~~~rl~~l~~l~~~f~~~~~~~~~Wl~~ 119 (599)
.+......++..+..+.. .+ | .. ..+.+....+.......+......-..+..++............+..=|..
T Consensus 550 ~~~~~~~~~~~~~~~~~~-~~-~-~~---~~l~~~~~~~~~el~~~~~~~~~~~~el~~~e~~l~~~~~~l~~~~~eL~~ 623 (1311)
T TIGR00606 550 QIRKIKSRHSDELTSLLG-YF-P-NK---KQLEDWLHSKSKEINQTRDRLAKLNKELASLEQNKNHINNELESKEEQLSS 623 (1311)
T ss_pred HHHHHHHHHHHHHHHhcC-CC-C-Cc---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444555555555444 32 2 22 344444444444444444444443333444444444555556666666666
Q ss_pred HHHhcccCCCCCCCH-HHHHHHHHHHHHHHHhHHhhHHHHHHHHH
Q psy12562 120 KEEMLQSSDFRQCKL-NELKALKKKHEAFESDLAAHQDRVEQIAA 163 (599)
Q Consensus 120 ~e~~l~~~~~~~~~l-~~v~~~l~~h~~~~~el~~~~~~v~~l~~ 163 (599)
....+... .+..+. ..+...-...+....++..+.....-...
T Consensus 624 ~~~~i~~~-~~~~~~~~~L~~~~~~l~~~~~~~~~~~~~~~~~~k 667 (1311)
T TIGR00606 624 YEDKLFDV-CGSQDEESDLERLKEEIEKSSKQRAMLAGATAVYSQ 667 (1311)
T ss_pred HHHHHhcC-CCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66666632 222332 24444445566666666665554444333
No 199
>PF08976 DUF1880: Domain of unknown function (DUF1880); InterPro: IPR015070 This entry represents EF-hand calcium-binding domain-containing protein 6 that negatively regulates the androgen receptor by recruiting histone deacetylase complex, and protein DJ-1 antagonises this inhibition by abrogation of this complex [].; PDB: 1WLZ_C.
Probab=33.02 E-value=32 Score=28.07 Aligned_cols=31 Identities=19% Similarity=0.439 Sum_probs=23.2
Q ss_pred CHHHHHHHHHHhCCCCCCccchHHHHHHHhh
Q psy12562 495 GEIDFQRILAVVDPNSTGYVHFDAFLDFMTR 525 (599)
Q Consensus 495 ~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~ 525 (599)
+++.++.++..+-.|..|++.|.+|+.-+..
T Consensus 5 tDeQFdrLW~e~Pvn~~GrLkY~eFL~kfs~ 35 (118)
T PF08976_consen 5 TDEQFDRLWNEMPVNAKGRLKYQEFLSKFSS 35 (118)
T ss_dssp -HHHHHHHHTTS-B-TTS-EEHHHHHHHT--
T ss_pred cHHHhhhhhhhCcCCccCCEeHHHHHHHccc
Confidence 7889999999999999999999999987753
No 200
>PLN02230 phosphoinositide phospholipase C 4
Probab=31.94 E-value=78 Score=34.42 Aligned_cols=65 Identities=9% Similarity=0.074 Sum_probs=36.6
Q ss_pred CCHHHHHHHHHHhCCCCCCccchHHHHHHHhhhcCC--CCCHHHHHHHHHhhh-------CC-CCCcCHHHHhccC
Q psy12562 494 QGEIDFQRILAVVDPNSTGYVHFDAFLDFMTRESTD--TDTAEQVIDSFRILA-------GD-KPYILPDELRREL 559 (599)
Q Consensus 494 ~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~--~~~~~~~~~~F~~~D-------~d-~G~it~~el~~~l 559 (599)
+...++..+|..+..++ +.++.++|..++...-.. ..+.+....+|..+- .- .+.++.+.|..+|
T Consensus 26 ~p~~ei~~lf~~~s~~~-~~mt~~~l~~FL~~~Q~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~F~~yL 100 (598)
T PLN02230 26 GPVADVRDLFEKYADGD-AHMSPEQLQKLMAEEGGGEGETSLEEAERIVDEVLRRKHHIAKFTRRNLTLDDFNYYL 100 (598)
T ss_pred CCcHHHHHHHHHHhCCC-CccCHHHHHHHHHHhCCCcccCCHHHHHHHHHHHHhhccccccccccccCHHHHHHHH
Confidence 35567777887775333 678888888877654322 123344444444331 11 2346666666655
No 201
>KOG1853|consensus
Probab=31.31 E-value=4.5e+02 Score=24.78 Aligned_cols=22 Identities=14% Similarity=0.169 Sum_probs=12.1
Q ss_pred HHHHHHHHHHhhhhhHHHhccc
Q psy12562 105 KFKHKADIHEDWTRGKEEMLQS 126 (599)
Q Consensus 105 ~f~~~~~~~~~Wl~~~e~~l~~ 126 (599)
.|+.-..++++-|+..-..+..
T Consensus 38 EFQegSrE~EaelesqL~q~et 59 (333)
T KOG1853|consen 38 EFQEGSREIEAELESQLDQLET 59 (333)
T ss_pred HHhhhhHHHHHHHHHHHHHHHH
Confidence 6776666666555544444333
No 202
>PF05667 DUF812: Protein of unknown function (DUF812); InterPro: IPR008530 This family consists of several eukaryotic proteins of unknown function.
Probab=31.02 E-value=7.5e+02 Score=27.19 Aligned_cols=30 Identities=20% Similarity=0.315 Sum_probs=23.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy12562 179 VNARCQRICDQWDHLGALTQQRRHALDEAE 208 (599)
Q Consensus 179 i~~~~~~l~~rw~~L~~~~~~R~~~L~~~~ 208 (599)
-..++..|...|+..+..+....+.|....
T Consensus 406 s~~rl~~L~~qWe~~R~pL~~e~r~lk~~~ 435 (594)
T PF05667_consen 406 SEQRLVELAQQWEKHRAPLIEEYRRLKEKA 435 (594)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 457888889999998888888877777543
No 203
>PF13514 AAA_27: AAA domain
Probab=30.60 E-value=1e+03 Score=28.63 Aligned_cols=44 Identities=20% Similarity=0.286 Sum_probs=21.4
Q ss_pred CHHHHHHHHHHHHhhhhccCCchHHHHHHHHHHHHHhHHhHHhcC
Q psy12562 12 SLSGVQKKLEEYRTYRRKHKPPRVEQKAKLETNFNTLQTKLRLSN 56 (599)
Q Consensus 12 ~~~~v~~~l~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~l~~~~ 56 (599)
+.+.|......+......... .-+....+...+..+..++..+.
T Consensus 450 ~~~~v~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~ 493 (1111)
T PF13514_consen 450 SRETVEAFRAEFEELERQLRR-ARDRLEELEEELARLEARLRRLA 493 (1111)
T ss_pred CHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHH
Confidence 555566655555554433221 12334455555555555555554
No 204
>PRK10929 putative mechanosensitive channel protein; Provisional
Probab=29.98 E-value=1e+03 Score=28.46 Aligned_cols=136 Identities=13% Similarity=0.066 Sum_probs=63.0
Q ss_pred CCCchhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHhcccCCCCCCCHHHHHHHHHH
Q psy12562 64 EGKMVSDIANAWKGLETSEKSFEEWLLSEMMRLERLEHLAQKFKHKADIHEDWTRGKEEMLQSSDFRQCKLNELKALKKK 143 (599)
Q Consensus 64 ~~~~~~~l~~~w~~L~~~~~~r~~~L~~~~~rl~~l~~l~~~f~~~~~~~~~Wl~~~e~~l~~~~~~~~~l~~v~~~l~~ 143 (599)
.+....+|+++.........+-++.+.....++.++..-.+..-+...+...-+.+....+....+++..+...+.
T Consensus 100 ~~~s~~~Leq~l~~~~~~L~~~q~~l~~~~~~~~~~~~~l~~~pq~~~~~~~~l~~i~~~L~~~~~~~~~l~~a~~---- 175 (1109)
T PRK10929 100 PNMSTDALEQEILQVSSQLLEKSRQAQQEQDRAREISDSLSQLPQQQTEARRQLNEIERRLQTLGTPNTPLAQAQL---- 175 (1109)
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHhhchhhHHHHHHHHHHHHHHHhCCCCCCCcccHHHH----
Confidence 4455566777666666555555555555544443322222222233356666677777777664443333332221
Q ss_pred HHHHHHhHHhhHHHHHHHHHH---HHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy12562 144 HEAFESDLAAHQDRVEQIAAI---AQELNTLEYHDSVSVNARCQRICDQWDHLGALTQQRRHAL 204 (599)
Q Consensus 144 h~~~~~el~~~~~~v~~l~~~---~~~L~~~~~~~~~~i~~~~~~l~~rw~~L~~~~~~R~~~L 204 (599)
..++.|.......+..+... ...+.+......+....+.+.+...-+.|+.....++..-
T Consensus 176 -~~lqae~~~l~~~~~~l~~~l~s~~~~~~L~~~q~dl~~~~~~~l~~~~~~Lq~~in~kR~~~ 238 (1109)
T PRK10929 176 -TALQAESAALKALVDELELAQLSANNRQELARLRSELAKKRSQQLDAYLQALRNQLNSQRQRE 238 (1109)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22333333333222222111 1111111111223456666666667777777766655443
No 205
>KOG2871|consensus
Probab=28.45 E-value=41 Score=33.41 Aligned_cols=65 Identities=17% Similarity=0.320 Sum_probs=49.9
Q ss_pred HHHHHHHHHhhcCCCCCCcCHHHHHHHHHHcCCCCCCCCCCHHH-HHHHHHHhCCCCCCccchHHHHHHHh
Q psy12562 455 LNEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIGKDRQGEID-FQRILAVVDPNSTGYVHFDAFLDFMT 524 (599)
Q Consensus 455 ~~~~~~~F~~~d~~~~g~l~~~e~~~~l~~~g~~~~~~~~~~~~-~~~~~~~~d~~~~g~I~~~eF~~~~~ 524 (599)
.+.+++.|..+|+.++|+|+.+-+..+|..++... ++.. +..+-..+|+.+-|.|-.++|+..+.
T Consensus 308 s~q~rR~f~a~d~~d~nfis~s~~~~vm~~~N~~v-----se~a~v~l~~~~l~pE~~~iil~~d~lg~~~ 373 (449)
T KOG2871|consen 308 SEQLRRNFHAYDPEDNNFISCSGLQIVMTALNRLV-----SEPAYVMLMRQPLDPESLGIILLEDFLGEFF 373 (449)
T ss_pred CHHHHhhhhccCccCCCeeecHHHHHHHHHhcccc-----cCHHHHHHhcCccChhhcceEEecccccccc
Confidence 46789999999999999999999999999988555 4443 33344456888888887777766554
No 206
>cd07176 terB tellurite resistance protein terB. This family contains uncharacterized bacterial proteins involved in tellurium resistance. The prototype of this CD is the Kp-terB protein from Klebsiella pneumoniae, whose 3D structure was recently determined. The biological function of terB and the mechanism responsible for tellurium resistance are unknown.
Probab=28.16 E-value=1.3e+02 Score=24.12 Aligned_cols=82 Identities=13% Similarity=0.034 Sum_probs=39.3
Q ss_pred CCCcCHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhCCCCCCccchHHHHHHHhhhcCCCCCHHHHHHHHHhh---hCC
Q psy12562 470 TGRLAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPNSTGYVHFDAFLDFMTRESTDTDTAEQVIDSFRIL---AGD 546 (599)
Q Consensus 470 ~g~l~~~e~~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~~F~~~---D~d 546 (599)
||.++..|...+.+.+...+..++.....+..+|...-..- ...+..++...+..... .+.-..+|... ..-
T Consensus 16 DG~v~~~E~~~i~~~l~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~----~~~r~~~~~~~~~ia~a 90 (111)
T cd07176 16 DGDIDDAELQAIEALLRSLPVLSGFDRERLIALLDKLLALL-RPEGLAALLKAAAKLLP----PELRETAFAVAVDIAAA 90 (111)
T ss_pred ccCCCHHHHHHHHHHHHcCccccCCCHHHHHHHHHHHHHHH-HHhhHHHHHHHHHHhCC----HHHHHHHHHHHHHHHHc
Confidence 57777777777666554322222224445555554432110 02445666666555332 22322222222 222
Q ss_pred CCCcCHHHHh
Q psy12562 547 KPYILPDELR 556 (599)
Q Consensus 547 ~G~it~~el~ 556 (599)
||.++..|-.
T Consensus 91 DG~~~~~E~~ 100 (111)
T cd07176 91 DGEVDPEERA 100 (111)
T ss_pred cCCCCHHHHH
Confidence 7888877653
No 207
>PF08580 KAR9: Yeast cortical protein KAR9; InterPro: IPR013889 The KAR9 protein in Saccharomyces cerevisiae (Baker's yeast) is a cytoskeletal protein required for karyogamy, correct positioning of the mitotic spindle and for orientation of cytoplasmic microtubules []. KAR9 localises at the shmoo tip in mating cells and at the tip of the growing bud in anaphase [].
Probab=27.92 E-value=9e+02 Score=27.14 Aligned_cols=58 Identities=14% Similarity=0.227 Sum_probs=41.3
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhHHHhh
Q psy12562 175 DSVSVNARCQRICDQWDHLGALTQQRRHALDEAEKILEKIDILHLEFAKRAAPFNNWLDGTREDLV 240 (599)
Q Consensus 175 ~~~~i~~~~~~l~~rw~~L~~~~~~R~~~L~~~~~~~q~~~~~~~~f~~~~~~l~~Wl~~~~~~l~ 240 (599)
....+..+-..|..+|..|...+..-+..|.+..-..- |..-..++..-++..+..+.
T Consensus 236 a~e~L~~r~~~L~~k~~~L~~e~~~LK~ELiedRW~~v--------Fr~l~~q~~~m~esver~~~ 293 (683)
T PF08580_consen 236 ACEELEDRYERLEKKWKKLEKEAESLKKELIEDRWNIV--------FRNLGRQAQKMCESVERSLS 293 (683)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHH--------HHHHHHHHHHHHHHHHHHHH
Confidence 34688899999999999999998888888877544443 66666666665555555443
No 208
>PF05099 TerB: Tellurite resistance protein TerB; InterPro: IPR007791 The prokaryotic heat shock protein DnaJ interacts with the chaperone hsp70-like DnaK protein []. Structurally, the DnaJ protein consists of an N-terminal conserved domain (called 'J' domain) of about 70 amino acids, a glycine-rich region ('G' domain') of about 30 residues, a central domain containing four repeats of a CXXCXGXG motif ('CRR' domain) and a C-terminal region of 120 to 170 residues. Direct interaction between DnaK and djlA is needed for the induction of the wcaABCDE operon which is involved in the synthesis of a colanic acid polysaccharide capsule. The colanic acid capsule may help the bacterium survive conditions outside the host [, ]; PDB: 2H5N_D 2JXU_A.
Probab=27.67 E-value=40 Score=28.71 Aligned_cols=81 Identities=15% Similarity=0.246 Sum_probs=41.8
Q ss_pred CCCCcCHHHHHHHHHHc--CCCCCCCCCCHHHHHHHHHHhCCCCCCccchHHHHHHHhhhcCCCCCHHH-HHHHHHhhhC
Q psy12562 469 RTGRLAPEEFKSCLVSL--GYSIGKDRQGEIDFQRILAVVDPNSTGYVHFDAFLDFMTRESTDTDTAEQ-VIDSFRILAG 545 (599)
Q Consensus 469 ~~g~l~~~e~~~~l~~~--g~~~~~~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~-~~~~F~~~D~ 545 (599)
-||.++.+|...+...+ ...+ +......++..++......+++.+|+..+...+. ...... +..++....
T Consensus 36 aDG~v~~~E~~~i~~~~~~~~~~-----~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~r~~ll~~l~~ia~- 108 (140)
T PF05099_consen 36 ADGEVDPEEIEAIRQLLAERFGL-----SPEEAEELIELADELKQEPIDLEELLRELRDSLS-PEEREDLLRMLIAIAY- 108 (140)
T ss_dssp TTSS--CHHHHHHHHHHHHCGCG-----SCHHHHHHHHHHCHHHHHCCHHHHHHHHHCTS---HHHHHHHHHHHHHHCT-
T ss_pred cCCCCCHHHHHHHHHHHHHhhCC-----CHHHHHHHHHHHHHHHhccccHHHHHHHHHHhhc-hHHHHHHHHHHHHHHh-
Confidence 47888988887776655 2222 3345566666666444446888888877655222 111122 222333322
Q ss_pred CCCCcCHHHHh
Q psy12562 546 DKPYILPDELR 556 (599)
Q Consensus 546 d~G~it~~el~ 556 (599)
-||.++..|-.
T Consensus 109 ADG~~~~~E~~ 119 (140)
T PF05099_consen 109 ADGEISPEEQE 119 (140)
T ss_dssp CTTC-SCCHHH
T ss_pred cCCCCCHHHHH
Confidence 26877776654
No 209
>PF05517 p25-alpha: p25-alpha ; InterPro: IPR008907 This family encodes a 25 kDa protein that is phosphorylated by a Ser/Thr-Pro kinase []. It has been described as a brain specific protein, but it is found in Tetrahymena thermophila.; PDB: 1WLM_A 1PUL_A 2JRF_A.
Probab=27.41 E-value=58 Score=28.51 Aligned_cols=60 Identities=10% Similarity=0.057 Sum_probs=37.2
Q ss_pred HHHHHHh---CCCCCCccchHHHHHHHh--hhcCCCCCHHHHHHHHHhhhCC-CCCcCHHHHhccC
Q psy12562 500 QRILAVV---DPNSTGYVHFDAFLDFMT--RESTDTDTAEQVIDSFRILAGD-KPYILPDELRREL 559 (599)
Q Consensus 500 ~~~~~~~---d~~~~g~I~~~eF~~~~~--~~~~~~~~~~~~~~~F~~~D~d-~G~it~~el~~~l 559 (599)
+.+|..| ...+...++-..|..+|. .++....+..++--+|..+-.. ...|+.++|..+|
T Consensus 2 ~~~F~~f~~fG~~~~~~m~~~~F~Kl~kD~~i~d~k~t~tdvDiiF~Kvk~k~~~~I~f~~F~~aL 67 (154)
T PF05517_consen 2 EAVFKAFASFGKKNGTEMDSKNFAKLCKDCGIIDKKLTSTDVDIIFSKVKAKGARKITFEQFLEAL 67 (154)
T ss_dssp HHHHHHHHCSSTSTSSEEEHHHHHHHHHHTSS--SSS-HHHHHHHHHHHT-SS-SEEEHHHHHHHH
T ss_pred HHHHHHHHHhcCCccccccHHHHHHHHHHcCCCCCCCchHHHHHHHHHhhcCCCcccCHHHHHHHH
Confidence 4456555 234445688888888886 3344446667888888886544 5668888887665
No 210
>PLN02222 phosphoinositide phospholipase C 2
Probab=26.35 E-value=1e+02 Score=33.46 Aligned_cols=66 Identities=12% Similarity=0.124 Sum_probs=45.3
Q ss_pred CCHHHHHHHHHHhCCCCCCccchHHHHHHHhhhcCC-CCCHHHHHHHHHhhhC-C-CCCcCHHHHhccCCc
Q psy12562 494 QGEIDFQRILAVVDPNSTGYVHFDAFLDFMTRESTD-TDTAEQVIDSFRILAG-D-KPYILPDELRRELPP 561 (599)
Q Consensus 494 ~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~-~~~~~~~~~~F~~~D~-d-~G~it~~el~~~l~~ 561 (599)
....++..+|..+.. ++.++.++|..++...-.. ..+.+....+|..+.. . .+.++.+.|..+|..
T Consensus 22 ~~~~ei~~if~~~~~--~~~mt~~~l~~FL~~~Q~~~~~~~~~~~~ii~~~~~~~~~~~~~~~gF~~yL~s 90 (581)
T PLN02222 22 EAPREIKTIFEKYSE--NGVMTVDHLHRFLIDVQKQDKATREDAQSIINSASSLLHRNGLHLDAFFKYLFG 90 (581)
T ss_pred CCcHHHHHHHHHhcC--CCCcCHHHHHHHHHHhcCCccCCHHHHHHHHHhhhhhhhccCcCHHHHHHHhcC
Confidence 345688889988863 4689999998888764332 2345666666766643 2 566888888887743
No 211
>PF07544 Med9: RNA polymerase II transcription mediator complex subunit 9; InterPro: IPR011425 The Mediator complex is a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. The Mediator complex, having a compact conformation in its free form, is recruited to promoters by direct interactions with regulatory proteins and serves for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. On recruitment the Mediator complex unfolds to an extended conformation and partially surrounds RNA polymerase II, specifically interacting with the unphosphorylated form of the C-terminal domain (CTD) of RNA polymerase II. The Mediator complex dissociates from the RNA polymerase II holoenzyme and stays at the promoter when transcriptional elongation begins. The Mediator complex is composed of at least 31 subunits: MED1, MED4, MED6, MED7, MED8, MED9, MED10, MED11, MED12, MED13, MED13L, MED14, MED15, MED16, MED17, MED18, MED19, MED20, MED21, MED22, MED23, MED24, MED25, MED26, MED27, MED29, MED30, MED31, CCNC, CDK8 and CDC2L6/CDK11. The subunits form at least three structurally distinct submodules. The head and the middle modules interact directly with RNA polymerase II, whereas the elongated tail module interacts with gene-specific regulatory proteins. Mediator containing the CDK8 module is less active than Mediator lacking this module in supporting transcriptional activation. The head module contains: MED6, MED8, MED11, SRB4/MED17, SRB5/MED18, ROX3/MED19, SRB2/MED20 and SRB6/MED22. The middle module contains: MED1, MED4, NUT1/MED5, MED7, CSE2/MED9, NUT2/MED10, SRB7/MED21 and SOH1/MED31. CSE2/MED9 interacts directly with MED4. The tail module contains: MED2, PGD1/MED3, RGR1/MED14, GAL11/MED15 and SIN4/MED16. The CDK8 module contains: MED12, MED13, CCNC and CDK8. Individual preparations of the Mediator complex lacking one or more distinct subunits have been variously termed ARC, CRSP, DRIP, PC2, SMCC and TRAP. This entry represents subunit Med9 of the Mediator complex. Subunit Med9 is part of the middle module of the Mediator complex []; this associates with the core polymerase subunits to form the RNA polymerase II holoenzyme. Med9 alternatively known as the chromosome segregation protein, CSE2 (P33308 from SWISSPROT) is required, along with CSE1 (P33307 from SWISSPROT) for accurate mitotic chromosome segregation in Saccharomyces cerevisiae (Baker's yeast) [].; GO: 0001104 RNA polymerase II transcription cofactor activity, 0006357 regulation of transcription from RNA polymerase II promoter, 0016592 mediator complex
Probab=26.30 E-value=2.6e+02 Score=21.44 Aligned_cols=53 Identities=13% Similarity=0.310 Sum_probs=33.6
Q ss_pred HHHHhchhhhhHHHHHHHHhhhhccCCCCHHHHHHHHHHHHhhhhccccchHHH
Q psy12562 342 FAEKANQVGPWIERQMDAVTSIGMGLQGSLEDQLHRLKEYEQGVYAYKPHIEEL 395 (599)
Q Consensus 342 f~~~~~~~~~Wl~e~~~~l~~~~~~~~~~~e~~~~~~~~~~~ei~~~~~~~~~l 395 (599)
|...+..+..-|..+...+.... |...+++.+...++.++..+......+..+
T Consensus 26 ~~~~~~~lk~Klq~ar~~i~~lp-gi~~s~eeq~~~i~~Le~~i~~k~~~L~~~ 78 (83)
T PF07544_consen 26 LDTATGSLKHKLQKARAAIRELP-GIDRSVEEQEEEIEELEEQIRKKREVLQKF 78 (83)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCC-CccCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44455555555555555554322 356888999888888888887765555444
No 212
>PF03999 MAP65_ASE1: Microtubule associated protein (MAP65/ASE1 family); InterPro: IPR007145 This is a family of microtubule associated proteins. One of its members is the yeast anaphase spindle elongation protein.; PDB: 3NRX_A 3NRY_A.
Probab=26.23 E-value=3.1e+02 Score=30.40 Aligned_cols=27 Identities=19% Similarity=0.407 Sum_probs=0.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy12562 178 SVNARCQRICDQWDHLGALTQQRRHAL 204 (599)
Q Consensus 178 ~i~~~~~~l~~rw~~L~~~~~~R~~~L 204 (599)
.+..-...+..-|+.|..-...|...+
T Consensus 229 ~~~~l~~~i~~LW~~L~~~~ee~~~F~ 255 (619)
T PF03999_consen 229 KLQELREKIEELWNRLDVPEEEREAFL 255 (619)
T ss_dssp ---------------------------
T ss_pred HHHHHHHHHHHHHHHhCCCHHHHHHHh
Confidence 334444445555666665555555443
No 213
>PF11616 EZH2_WD-Binding: WD repeat binding protein EZH2; InterPro: IPR021654 This family of proteins represents Enhancer of zest homologue 2, (EZH2) a 30 residue peptide which binds to a WD-repeat domain of EED by residues 39-68. EED is a component of PRC2 complex which is involved in gene expression []. This interaction is required for the HMTase activity of PCR2 []. ; GO: 0018024 histone-lysine N-methyltransferase activity; PDB: 2QXV_B.
Probab=25.46 E-value=1e+02 Score=18.35 Aligned_cols=18 Identities=17% Similarity=0.534 Sum_probs=13.8
Q ss_pred hhHHHHHHHHHHHHHHHH
Q psy12562 177 VSVNARCQRICDQWDHLG 194 (599)
Q Consensus 177 ~~i~~~~~~l~~rw~~L~ 194 (599)
..|.++.+-|++.|..++
T Consensus 9 ~Ki~e~t~iLN~eWk~lR 26 (30)
T PF11616_consen 9 QKIQERTDILNEEWKKLR 26 (30)
T ss_dssp HHHHHHHHHHHHHHHH--
T ss_pred HHHHHHHHHHHHHHHHhc
Confidence 468899999999998775
No 214
>KOG1265|consensus
Probab=25.28 E-value=3.2e+02 Score=30.99 Aligned_cols=70 Identities=17% Similarity=0.252 Sum_probs=55.6
Q ss_pred HHHHHHHHhhcCCCCCCcCHHHHHHHHHHcCCCCC-----CCCCCHHHHHHHHHHhCCCC----CCccchHHHHHHHhh
Q psy12562 456 NEFRASFNHFDKNRTGRLAPEEFKSCLVSLGYSIG-----KDRQGEIDFQRILAVVDPNS----TGYVHFDAFLDFMTR 525 (599)
Q Consensus 456 ~~~~~~F~~~d~~~~g~l~~~e~~~~l~~~g~~~~-----~~~~~~~~~~~~~~~~d~~~----~g~I~~~eF~~~~~~ 525 (599)
.++.++|..+..++..+++.++|..+++.--.+|. +++.....+..++..+.+++ +|.++-+-|+.++.+
T Consensus 221 ~eie~iF~ki~~~~kpylT~~ql~dfln~~QrDpRLNeilfp~~~~~r~~~liekyEp~~~~a~~gqms~dgf~ryl~g 299 (1189)
T KOG1265|consen 221 PEIEEIFRKISGKKKPYLTKEQLVDFLNKKQRDPRLNEILFPPADPRRIQSLIEKYEPNSDNAEKGQMSTDGFVRYLMG 299 (1189)
T ss_pred hhHHHHHHHhccCCCccccHHHHHHHHhhhccCcchhhhhcCCCCHHHHHHHHHHcCCchhhhhccccchhhhHHHhhC
Confidence 66789999999999899999999999975433221 13447788889999988775 488999999998876
No 215
>PRK09039 hypothetical protein; Validated
Probab=25.12 E-value=7.2e+02 Score=25.08 Aligned_cols=81 Identities=14% Similarity=0.048 Sum_probs=50.2
Q ss_pred HHHHHHHHhHHhhHHHHHHHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHH
Q psy12562 142 KKHEAFESDLAAHQDRVEQIAAIAQELNTLEYHDSVSVNARCQRICDQWDHLGALTQQRRHALDEAEKI-LEKIDILHLE 220 (599)
Q Consensus 142 ~~h~~~~~el~~~~~~v~~l~~~~~~L~~~~~~~~~~i~~~~~~l~~rw~~L~~~~~~R~~~L~~~~~~-~q~~~~~~~~ 220 (599)
.+............+.|..|......|... -..|...++....+=...+..+..-+..|..++.. .+.+..++.+
T Consensus 123 ~~L~~~k~~~se~~~~V~~L~~qI~aLr~Q----la~le~~L~~ae~~~~~~~~~i~~L~~~L~~a~~~~~~~l~~~~~~ 198 (343)
T PRK09039 123 QELDSEKQVSARALAQVELLNQQIAALRRQ----LAALEAALDASEKRDRESQAKIADLGRRLNVALAQRVQELNRYRSE 198 (343)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHH
Confidence 444444555555556666666666555443 34566667777777777777777777777777754 5556666666
Q ss_pred HHHhhh
Q psy12562 221 FAKRAA 226 (599)
Q Consensus 221 f~~~~~ 226 (599)
|.....
T Consensus 199 ~~~~l~ 204 (343)
T PRK09039 199 FFGRLR 204 (343)
T ss_pred HHHHHH
Confidence 655443
No 216
>PF12718 Tropomyosin_1: Tropomyosin like; InterPro: IPR000533 Tropomyosins [], are a family of closely related proteins present in muscle and non-muscle cells. In striated muscle, tropomyosin mediate the interactions between the troponin complex and actin so as to regulate muscle contraction []. The role of tropomyosin in smooth muscle and non-muscle tissues is not clear. Tropomyosin is an alpha-helical protein that forms a coiled-coil structure of 2 parallel helices containing 2 sets of 7 alternating actin binding sites []. There are multiple cell-specific isoforms, created by differential splicing of the messenger RNA from one gene, but the proportions of the isoforms vary between different cell types. Muscle isoforms of tropomyosin are characterised by having 284 amino acid residues and a highly conserved N-terminal region, whereas non-muscle forms are generally smaller and are heterogeneous in their N-terminal region. This entry represents tropomyosin (Tmp) 1, 2 and 3. Within the yeast Tmp1 and Tmp2, biochemical and sequence analyses indicate that Tpm2 spans four actin monomers along a filament, whereas Tpm1 spans five. Despite its shorter length, Tpm2 can compete with Tpm1 for binding to F-actin. Over-expression of Tpm2 in vivo alters the axial budding of haploids to a bipolar pattern, and this can be partially suppressed by co-over-expression of Tpm1. This suggests distinct functions for the two tropomyosins, and indicates that the ratio between them is important for correct morphogenesis [].
Probab=24.51 E-value=4.6e+02 Score=22.58 Aligned_cols=33 Identities=21% Similarity=0.419 Sum_probs=24.6
Q ss_pred HHHHHHHHHHHHHHhHHhhHHHHHHHHHHHHHH
Q psy12562 136 ELKALKKKHEAFESDLAAHQDRVEQIAAIAQEL 168 (599)
Q Consensus 136 ~v~~~l~~h~~~~~el~~~~~~v~~l~~~~~~L 168 (599)
.|..+.++...++.+|......+..+......-
T Consensus 36 EI~sL~~K~~~lE~eld~~~~~l~~~k~~lee~ 68 (143)
T PF12718_consen 36 EITSLQKKNQQLEEELDKLEEQLKEAKEKLEES 68 (143)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhH
Confidence 467777888888888888888877777665543
No 217
>PRK10929 putative mechanosensitive channel protein; Provisional
Probab=24.45 E-value=1.3e+03 Score=27.72 Aligned_cols=15 Identities=13% Similarity=0.271 Sum_probs=8.8
Q ss_pred CCHHHHHHHHHHHHh
Q psy12562 11 NSLSGVQKKLEEYRT 25 (599)
Q Consensus 11 ~~~~~v~~~l~~~~~ 25 (599)
++-+.|+.+|...++
T Consensus 23 p~~~~iq~~l~~~~~ 37 (1109)
T PRK10929 23 PDEKQITQELEQAKA 37 (1109)
T ss_pred CCHHHHHHHHHHhhc
Confidence 444666666666554
No 218
>COG4026 Uncharacterized protein containing TOPRIM domain, potential nuclease [General function prediction only]
Probab=23.86 E-value=5.9e+02 Score=23.59 Aligned_cols=59 Identities=17% Similarity=0.283 Sum_probs=32.9
Q ss_pred HHHHHHHHhHHHHhhHHHHHHHHhHHHHHHHHHHHHHHhhcCCCCCCCCCCCCChHHHHHHHHHHHHhhH
Q psy12562 250 EIQGLIDAHSQFKATLGEADKEYNSIVNLVREVESTVQQYQIPGGLENPYTALTANDLTKKWTDVRKLVP 319 (599)
Q Consensus 250 ~v~~ll~~h~~l~~el~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~w~~L~~~~~ 319 (599)
+-..++++.+.++.++++.+.++..+..-...|...... ..-....|..+|+.|...++
T Consensus 150 EkeeL~~eleele~e~ee~~erlk~le~E~s~LeE~~~~-----------l~~ev~~L~~r~~ELe~~~E 208 (290)
T COG4026 150 EKEELLKELEELEAEYEEVQERLKRLEVENSRLEEMLKK-----------LPGEVYDLKKRWDELEPGVE 208 (290)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----------chhHHHHHHHHHHHhccccc
Confidence 334566777777777777666555554433333333221 11134578888888766543
No 219
>PF07308 DUF1456: Protein of unknown function (DUF1456); InterPro: IPR009921 This domain occurs in several hypothetical bacterial proteins of around 150 residues in length. The function of this domain is unknown.
Probab=23.55 E-value=2.5e+02 Score=20.65 Aligned_cols=32 Identities=13% Similarity=0.302 Sum_probs=21.1
Q ss_pred cCHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhCCC
Q psy12562 473 LAPEEFKSCLVSLGYSIGKDRQGEIDFQRILAVVDPN 509 (599)
Q Consensus 473 l~~~e~~~~l~~~g~~~~~~~~~~~~~~~~~~~~d~~ 509 (599)
++.+++..++...|+.+ +..++.++++.-+..
T Consensus 14 l~d~~m~~if~l~~~~v-----s~~el~a~lrke~~~ 45 (68)
T PF07308_consen 14 LKDDDMIEIFALAGFEV-----SKAELSAWLRKEDEK 45 (68)
T ss_pred CChHHHHHHHHHcCCcc-----CHHHHHHHHCCCCCc
Confidence 44566777777777777 777777777664433
No 220
>TIGR02168 SMC_prok_B chromosome segregation protein SMC, common bacterial type. SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle.
Probab=23.53 E-value=1.3e+03 Score=27.58 Aligned_cols=17 Identities=18% Similarity=0.196 Sum_probs=7.8
Q ss_pred ccHHHHHHHHHHHHHHH
Q psy12562 415 YTMETLRVGWEQLLTSI 431 (599)
Q Consensus 415 ~~~~~l~~~w~~l~~~~ 431 (599)
.+...+..+...+....
T Consensus 993 er~~~l~~q~~dL~~~~ 1009 (1179)
T TIGR02168 993 EEYEELKERYDFLTAQK 1009 (1179)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 34444555544444433
No 221
>KOG0933|consensus
Probab=23.49 E-value=1.2e+03 Score=27.17 Aligned_cols=110 Identities=17% Similarity=0.194 Sum_probs=56.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhhh---hhHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhHHhhHHHHHHHHHHHHHHhhcc
Q psy12562 96 LERLEHLAQKFKHKADIHEDWT---RGKEEMLQSSDFRQCKLNELKALKKKHEAFESDLAAHQDRVEQIAAIAQELNTLE 172 (599)
Q Consensus 96 l~~l~~l~~~f~~~~~~~~~Wl---~~~e~~l~~~~~~~~~l~~v~~~l~~h~~~~~el~~~~~~v~~l~~~~~~L~~~~ 172 (599)
+..++...++|..--.++.--+ .-.+..+....++ ..++++.......+..+.+|......+......+..|...-
T Consensus 700 L~~le~~~~kf~~l~~ql~l~~~~l~l~~~r~~~~e~~-~~~~~~~~~~e~v~e~~~~Ike~~~~~k~~~~~i~~lE~~~ 778 (1174)
T KOG0933|consen 700 LKSLEAQSQKFRDLKQQLELKLHELALLEKRLEQNEFH-KLLDDLKELLEEVEESEQQIKEKERALKKCEDKISTLEKKM 778 (1174)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChHh-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3334444445544444333333 3334445554443 56777888888888888888777777766666655544332
Q ss_pred CCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy12562 173 YHDSVSVNARCQRICDQWDHLGALTQQRRHALDE 206 (599)
Q Consensus 173 ~~~~~~i~~~~~~l~~rw~~L~~~~~~R~~~L~~ 206 (599)
......=..++..+..........+++-...++.
T Consensus 779 ~d~~~~re~rlkdl~keik~~k~~~e~~~~~~ek 812 (1174)
T KOG0933|consen 779 KDAKANRERRLKDLEKEIKTAKQRAEESSKELEK 812 (1174)
T ss_pred hHhhhhhHhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2222223344444444444444444443333333
No 222
>KOG4403|consensus
Probab=23.31 E-value=1.1e+02 Score=31.08 Aligned_cols=61 Identities=18% Similarity=0.306 Sum_probs=0.0
Q ss_pred CCCCHHHHHHHHHHhCCCCCCccchHHHHHHHhhhcCCCCCHHHHHHHHHhhhCCCCCcCHHHH
Q psy12562 492 DRQGEIDFQRILAVVDPNSTGYVHFDAFLDFMTRESTDTDTAEQVIDSFRILAGDKPYILPDEL 555 (599)
Q Consensus 492 ~~~~~~~~~~~~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~~F~~~D~d~G~it~~el 555 (599)
|..+-+.+..|-+.+|.|.+|.|+.+|--.++..-+.-..+...=...|.. +|..||.++|
T Consensus 63 dklg~EAir~iHrqmDDD~nG~Id~~ESdeFlrEdmky~~~~~kr~~~fH~---dD~~ItVedL 123 (575)
T KOG4403|consen 63 DKLGYEAIRDIHRQMDDDHNGSIDVEESDEFLREDMKYRDSTRKRSEKFHG---DDKHITVEDL 123 (575)
T ss_pred chhhHHHHHHHHHhcccccCCCcccccchHHHHHHhhcccchhhhhhhccC---CccceeHHHH
No 223
>PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs. It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells [].
Probab=23.04 E-value=1.1e+03 Score=26.59 Aligned_cols=77 Identities=14% Similarity=0.143 Sum_probs=33.2
Q ss_pred CHHHHHHHHHHHHHHHHh-HHhhHHHHHHHHHHHHHHhhccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy12562 133 KLNELKALKKKHEAFESD-LAAHQDRVEQIAAIAQELNTLEYHDSVSVNARCQRICDQWDHLGALTQQRRHALDEAEKIL 211 (599)
Q Consensus 133 ~l~~v~~~l~~h~~~~~e-l~~~~~~v~~l~~~~~~L~~~~~~~~~~i~~~~~~l~~rw~~L~~~~~~R~~~L~~~~~~~ 211 (599)
..+..+-+.+..+.|..+ +..+...-..+...+..|.... ..-..++..+.++-..|+..+..=..+++.+...+
T Consensus 534 ~~E~l~lL~~a~~vlreeYi~~~~~ar~ei~~rv~~Lk~~~----e~Ql~~L~~l~e~~~~l~~~ae~LaeR~e~a~d~Q 609 (717)
T PF10168_consen 534 PQECLELLSQATKVLREEYIEKQDLAREEIQRRVKLLKQQK----EQQLKELQELQEERKSLRESAEKLAERYEEAKDKQ 609 (717)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445555555566777766 4444333333444333332211 11122333333344444444433334444444444
Q ss_pred HH
Q psy12562 212 EK 213 (599)
Q Consensus 212 q~ 213 (599)
..
T Consensus 610 e~ 611 (717)
T PF10168_consen 610 EK 611 (717)
T ss_pred HH
Confidence 43
No 224
>PF14942 Muted: Organelle biogenesis, Muted-like protein
Probab=22.80 E-value=5e+02 Score=22.44 Aligned_cols=57 Identities=18% Similarity=0.318 Sum_probs=42.4
Q ss_pred HHhhHHHHHHHHHHHHHHhhccC--CCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy12562 151 LAAHQDRVEQIAAIAQELNTLEY--HDSVSVNARCQRICDQWDHLGALTQQRRHALDEA 207 (599)
Q Consensus 151 l~~~~~~v~~l~~~~~~L~~~~~--~~~~~i~~~~~~l~~rw~~L~~~~~~R~~~L~~~ 207 (599)
+.+...+++..+..+..|....+ .....+.+........|+.+..-...++..+++.
T Consensus 68 L~~l~~~l~~a~~~~~~l~~~e~~~~~~~~l~~~~~~~~~~we~f~~e~~~~~~~vdee 126 (145)
T PF14942_consen 68 LEQLLERLQAANSMCSRLQQKEQEKQKDDYLQANREQRKQEWEEFMKEQQQKKQRVDEE 126 (145)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44455566666666666655532 2357788888889999999999999999999885
No 225
>COG1283 NptA Na+/phosphate symporter [Inorganic ion transport and metabolism]
Probab=22.62 E-value=9.9e+02 Score=25.77 Aligned_cols=42 Identities=21% Similarity=0.348 Sum_probs=34.8
Q ss_pred HHHHHHHHHHHhhhhccCCchHHHHHHHHHHHHHhHHhHHhcC
Q psy12562 14 SGVQKKLEEYRTYRRKHKPPRVEQKAKLETNFNTLQTKLRLSN 56 (599)
Q Consensus 14 ~~v~~~l~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~l~~~~ 56 (599)
+.++..+..+++|-+. .|+.......++..++.++..++...
T Consensus 345 d~ie~ml~~~~~~~~~-~~~~~~~i~~~e~~vd~~~~~Ik~YL 386 (533)
T COG1283 345 DSIEQMLERLYEYIEG-DAKKVKEIRKLEDAVDRLYEEIKLYL 386 (533)
T ss_pred HHHHHHHHHHHHHHhc-chHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3467788888898888 89999999999999988888877665
No 226
>PRK02224 chromosome segregation protein; Provisional
Probab=22.56 E-value=1.2e+03 Score=26.92 Aligned_cols=316 Identities=12% Similarity=0.167 Sum_probs=0.0
Q ss_pred CCCCCCHHHHHHHHHHHHhhhhccCCchHHHHHHHHHHHHHhHHhHHhcC-----CCCCCCCCCCchhHHHHHHHHHHHh
Q psy12562 7 RQTDNSLSGVQKKLEEYRTYRRKHKPPRVEQKAKLETNFNTLQTKLRLSN-----RPAYMPTEGKMVSDIANAWKGLETS 81 (599)
Q Consensus 7 ~~~~~~~~~v~~~l~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~l~~~~-----~~~~~~~~~~~~~~l~~~w~~L~~~ 81 (599)
..++..+..++..+...+.-... .-.....+...+......+.... ++....++...+..+...-..+...
T Consensus 408 ~~~e~~l~~l~~~~~~l~~~~~~----~~~~~~~~~~~l~~~~~~l~~~~Cp~C~r~~~~~~~~~~~~~~~~~~~~~~~~ 483 (880)
T PRK02224 408 GNAEDFLEELREERDELREREAE----LEATLRTARERVEEAEALLEAGKCPECGQPVEGSPHVETIEEDRERVEELEAE 483 (880)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHhcccCCCCCCcCCCcchhhhHHHHHHHHHHHHHH
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHhcccCCCCCCCHHHHHHHHHHHHHHHHhHHhhHHHHHHH
Q psy12562 82 EKSFEEWLLSEMMRLERLEHLAQKFKHKADIHEDWTRGKEEMLQSSDFRQCKLNELKALKKKHEAFESDLAAHQDRVEQI 161 (599)
Q Consensus 82 ~~~r~~~L~~~~~rl~~l~~l~~~f~~~~~~~~~Wl~~~e~~l~~~~~~~~~l~~v~~~l~~h~~~~~el~~~~~~v~~l 161 (599)
.......+...-.+++.+.... .-......+..-+.+.+..+.. ....+.....+.+.+..++......+...
T Consensus 484 ~~~le~~l~~~~~~~e~l~~~~-~~~~~l~~l~~~~~~l~~~~~~------~~e~le~~~~~~~~l~~e~~~l~~~~~~~ 556 (880)
T PRK02224 484 LEDLEEEVEEVEERLERAEDLV-EAEDRIERLEERREDLEELIAE------RRETIEEKRERAEELRERAAELEAEAEEK 556 (880)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHH------HHHHHHhHHHHHHHHHHHHHHHHHHHHHH
Q ss_pred HHHHHHHhhccCC---CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhHHH
Q psy12562 162 AAIAQELNTLEYH---DSVSVNARCQRICDQWDHLGALTQQRRHALDEAEKILEKIDILHLEFAKRAAPFNNWLDGTRED 238 (599)
Q Consensus 162 ~~~~~~L~~~~~~---~~~~i~~~~~~l~~rw~~L~~~~~~R~~~L~~~~~~~q~~~~~~~~f~~~~~~l~~Wl~~~~~~ 238 (599)
...+..+...... ....+..++..+...-..|. -+......|.+.......++.-...+...-..+..=+.+....
T Consensus 557 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~le-~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~r~~ 635 (880)
T PRK02224 557 REAAAEAEEEAEEAREEVAELNSKLAELKERIESLE-RIRTLLAAIADAEDEIERLREKREALAELNDERRERLAEKRER 635 (880)
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_pred hhHHHHhhcHHHHHHHHHHhHHHHhhHHHHHHHHhHHHHHHHHHHHHHHhhcCCCCCCCCCCCCChHHHHHHHHHHHHhh
Q psy12562 239 LVDMFIVHTMEEIQGLIDAHSQFKATLGEADKEYNSIVNLVREVESTVQQYQIPGGLENPYTALTANDLTKKWTDVRKLV 318 (599)
Q Consensus 239 l~~~~~~~~~~~v~~ll~~h~~l~~el~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~w~~L~~~~ 318 (599)
+....-.-+......+..++..+...+......+..+......+..... .+...-..+ ...
T Consensus 636 i~~l~~~~~~~~~e~l~~~~~~~~~~~~~l~~~l~~~~~~~~~l~~~i~------------------~~~~~~e~~-~~~ 696 (880)
T PRK02224 636 KRELEAEFDEARIEEAREDKERAEEYLEQVEEKLDELREERDDLQAEIG------------------AVENELEEL-EEL 696 (880)
T ss_pred HHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------------------HHHHHHHHH-HHH
Q ss_pred HhHhHHHHHHHHhhcchHHHHHHHHHHhchhhhhHHHHHHHH
Q psy12562 319 PQRDTTLQAELRKQQNNETLRRQFAEKANQVGPWIERQMDAV 360 (599)
Q Consensus 319 ~~R~~~L~~~l~~~~~~~~l~~~f~~~~~~~~~Wl~e~~~~l 360 (599)
..+...+...+. .+..+...+..+..-+......+
T Consensus 697 ~~~~~~~~~~~~-------~l~~~~~~~~~L~~~~~~~~~~~ 731 (880)
T PRK02224 697 RERREALENRVE-------ALEALYDEAEELESMYGDLRAEL 731 (880)
T ss_pred HHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHH
No 227
>KOG3647|consensus
Probab=22.02 E-value=7e+02 Score=23.85 Aligned_cols=27 Identities=7% Similarity=0.205 Sum_probs=17.5
Q ss_pred HHHHHHHHHHHhhHhHhHHHHHHHHhh
Q psy12562 306 DLTKKWTDVRKLVPQRDTTLQAELRKQ 332 (599)
Q Consensus 306 ~l~~~w~~L~~~~~~R~~~L~~~l~~~ 332 (599)
.+.+--.+|...++.|+..|+....|.
T Consensus 130 nvasdea~L~~Kierrk~ElEr~rkRl 156 (338)
T KOG3647|consen 130 NVASDEAALGSKIERRKAELERTRKRL 156 (338)
T ss_pred HHhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333444567777888888887765543
No 228
>COG0419 SbcC ATPase involved in DNA repair [DNA replication, recombination, and repair]
Probab=21.80 E-value=1.3e+03 Score=26.93 Aligned_cols=30 Identities=17% Similarity=0.387 Sum_probs=15.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy12562 178 SVNARCQRICDQWDHLGALTQQRRHALDEA 207 (599)
Q Consensus 178 ~i~~~~~~l~~rw~~L~~~~~~R~~~L~~~ 207 (599)
.+......+...+..+......|...+...
T Consensus 340 ~l~~~~~~l~~~~~~~~~~~~~~~~~l~~~ 369 (908)
T COG0419 340 KLESELEELAEEKNELAKLLEERLKELEER 369 (908)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344445555555555555555555555444
No 229
>PF12795 MscS_porin: Mechanosensitive ion channel porin domain
Probab=21.27 E-value=7e+02 Score=23.54 Aligned_cols=86 Identities=12% Similarity=0.105 Sum_probs=63.9
Q ss_pred HHHhHHhHHhcCC---CCCCCCCCCchhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHH
Q psy12562 45 FNTLQTKLRLSNR---PAYMPTEGKMVSDIANAWKGLETSEKSFEEWLLSEMMRLERLEHLAQKFKHKADIHEDWTRGKE 121 (599)
Q Consensus 45 l~~~~~~l~~~~~---~~~~~~~~~~~~~l~~~w~~L~~~~~~r~~~L~~~~~rl~~l~~l~~~f~~~~~~~~~Wl~~~e 121 (599)
+..+...+..... +....+.+....+|..+..........-+..|...-.++..+...-.++.....+...-+.+..
T Consensus 54 ~~~l~~~l~~l~~~~~~~~~~~~~~s~~eLeq~l~~~~~~L~~~q~~l~~~~~~l~~~~~~p~~aq~~l~~~~~~l~ei~ 133 (240)
T PF12795_consen 54 IRELQKELEALKSQDAPSKEILANLSLEELEQRLSQEQAQLQELQEQLQQENSQLIEIQTRPERAQQQLSEARQRLQEIR 133 (240)
T ss_pred HHHHHHHHHhhhccccccccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHH
Confidence 4444555544432 3555567788888999988888887777777777777777777677788888899999999999
Q ss_pred HhcccCCCC
Q psy12562 122 EMLQSSDFR 130 (599)
Q Consensus 122 ~~l~~~~~~ 130 (599)
..+....++
T Consensus 134 ~~L~~~~~~ 142 (240)
T PF12795_consen 134 NQLQNLPPN 142 (240)
T ss_pred HHHhccCCC
Confidence 999885443
No 230
>cd07665 BAR_SNX1 The Bin/Amphiphysin/Rvs (BAR) domain of Sorting Nexin 1. BAR domains are dimerization, lipid binding and curvature sensing modules found in many different proteins with diverse functions. Sorting nexins (SNXs) are Phox homology (PX) domain containing proteins that are involved in regulating membrane traffic and protein sorting in the endosomal system. SNXs differ from each other in their lipid-binding specificity, subcellular localization and specific function in the endocytic pathway. A subset of SNXs also contain BAR domains. The PX-BAR structural unit determines the specific membrane targeting of SNXs. SNX1 is a component of the retromer complex, a membrane coat multimeric complex required for endosomal retrieval of lysosomal hydrolase receptors to the Golgi. The retromer consists of a cargo-recognition subcomplex and a subcomplex formed by a dimer of sorting nexins (SNX1 and/or SNX2), which ensures effcient cargo sorting by facilitating proper membrane localization
Probab=21.01 E-value=7.1e+02 Score=23.53 Aligned_cols=82 Identities=15% Similarity=0.224 Sum_probs=45.9
Q ss_pred HHHHHhhhhhHHHhcccCCCCCCCHHHHHHHHHH-HHHHHHhHHhhHHHHHHHHHHHHHHhhccCC-CchhHHHHHHHHH
Q psy12562 110 ADIHEDWTRGKEEMLQSSDFRQCKLNELKALKKK-HEAFESDLAAHQDRVEQIAAIAQELNTLEYH-DSVSVNARCQRIC 187 (599)
Q Consensus 110 ~~~~~~Wl~~~e~~l~~~~~~~~~l~~v~~~l~~-h~~~~~el~~~~~~v~~l~~~~~~L~~~~~~-~~~~i~~~~~~l~ 187 (599)
+.+-..|..++...+.. ++.+|++ |+....-+..+..-...+..-|..+...+.. ..+.+...+..|.
T Consensus 17 ~~E~D~wF~~k~~~ie~----------LE~qLk~L~k~~~~lv~~r~eLa~~~~eFa~s~~~L~~~E~~~~Ls~als~la 86 (234)
T cd07665 17 MNESDVWFEEKLQEVEC----------EEQRLRKLHAVVETLVNHRKELALNTALFAKSLAMLGSSEDNTALSRALSQLA 86 (234)
T ss_pred cCCCcHHHHHHHHHHHH----------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHH
Confidence 34445677777665544 3334443 5566666666666666666666665555443 3345666666665
Q ss_pred HHHHHHHHHHHHHH
Q psy12562 188 DQWDHLGALTQQRR 201 (599)
Q Consensus 188 ~rw~~L~~~~~~R~ 201 (599)
+.-..+....+...
T Consensus 87 ev~~~i~~~~~~qa 100 (234)
T cd07665 87 EVEEKIEQLHQEQA 100 (234)
T ss_pred HHHHHHHHHHHHHH
Confidence 55555555444433
No 231
>PLN02228 Phosphoinositide phospholipase C
Probab=20.57 E-value=2.8e+02 Score=30.13 Aligned_cols=64 Identities=14% Similarity=0.162 Sum_probs=35.8
Q ss_pred CCHHHHHHHHHhhhCCCCCcCHHHHhccCCc---------chHHHHHHhcCCCCCCCCCCCCccHHHHHHHhhcC
Q psy12562 531 DTAEQVIDSFRILAGDKPYILPDELRRELPP---------DQAEYCIQRMPPYKGPNAIPGALDYQSFSTALYGE 596 (599)
Q Consensus 531 ~~~~~~~~~F~~~D~d~G~it~~el~~~l~~---------~~~~~~~~~~~~~~d~~~~dg~i~~~eF~~~~~~~ 596 (599)
....++..+|..+..+ +++|.++|..+|.. +.+..++..+... +.....|.++.+.|...|+..
T Consensus 21 ~~~~ei~~if~~~s~~-~~~t~~~~~~FL~~~Q~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~~~gF~~yl~s~ 93 (567)
T PLN02228 21 EPPVSIKRLFEAYSRN-GKMSFDELLRFVSEVQGERHAGLDYVQDIFHSVKHH-NVFHHHGLVHLNAFYRYLFSD 93 (567)
T ss_pred CCcHHHHHHHHHhcCC-CccCHHHHHHHHHHhcCCccCCHHHHHHHHHHhccc-hhhcccCccCHHHHHHHhcCc
Confidence 3557777777777543 46777777777621 2234444443211 111114567777777777653
No 232
>KOG3647|consensus
Probab=20.49 E-value=7.6e+02 Score=23.64 Aligned_cols=55 Identities=16% Similarity=0.228 Sum_probs=40.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhhh
Q psy12562 181 ARCQRICDQWDHLGALTQQRRHALDEAEKILEKIDILHLEFAKRAAPFNNWLDGT 235 (599)
Q Consensus 181 ~~~~~l~~rw~~L~~~~~~R~~~L~~~~~~~q~~~~~~~~f~~~~~~l~~Wl~~~ 235 (599)
.++..+..--..|...++.|+..|+....++..+++.+..|......++.-|+..
T Consensus 126 ~~Lnnvasdea~L~~Kierrk~ElEr~rkRle~LqsiRP~~MdEyE~~EeeLqkl 180 (338)
T KOG3647|consen 126 AQLNNVASDEAALGSKIERRKAELERTRKRLEALQSIRPAHMDEYEDCEEELQKL 180 (338)
T ss_pred HHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHH
Confidence 4455555556677888889999999988888888888777777776666655543
No 233
>KOG1937|consensus
Probab=20.34 E-value=9.9e+02 Score=24.91 Aligned_cols=28 Identities=18% Similarity=0.338 Sum_probs=14.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy12562 181 ARCQRICDQWDHLGALTQQRRHALDEAE 208 (599)
Q Consensus 181 ~~~~~l~~rw~~L~~~~~~R~~~L~~~~ 208 (599)
.++..+.+.|+..+....+.+..|.+.+
T Consensus 307 ~~~~~ltqqwed~R~pll~kkl~Lr~~l 334 (521)
T KOG1937|consen 307 KQMEELTQQWEDTRQPLLQKKLQLREEL 334 (521)
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 3444455555555555555555554433
No 234
>smart00502 BBC B-Box C-terminal domain. Coiled coil region C-terminal to (some) B-Box domains
Probab=20.21 E-value=4.8e+02 Score=21.17 Aligned_cols=34 Identities=18% Similarity=0.139 Sum_probs=23.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy12562 179 VNARCQRICDQWDHLGALTQQRRHALDEAEKILE 212 (599)
Q Consensus 179 i~~~~~~l~~rw~~L~~~~~~R~~~L~~~~~~~q 212 (599)
.......|...+..|...+..|+..|-..+....
T Consensus 37 ~~~~~~~I~~~f~~l~~~L~~~e~~ll~~l~~~~ 70 (127)
T smart00502 37 AADVEAQIKAAFDELRNALNKRKKQLLEDLEEQK 70 (127)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4555667777778888888888887777655543
No 235
>PLN02222 phosphoinositide phospholipase C 2
Probab=20.18 E-value=3.3e+02 Score=29.69 Aligned_cols=64 Identities=17% Similarity=0.366 Sum_probs=46.8
Q ss_pred HHHHHHHHhhcCCCCCCcCHHHHHHHHHHc-CCCCCCCCCCHHHHHHHHHHhCC-CCCCccchHHHHHHHhh
Q psy12562 456 NEFRASFNHFDKNRTGRLAPEEFKSCLVSL-GYSIGKDRQGEIDFQRILAVVDP-NSTGYVHFDAFLDFMTR 525 (599)
Q Consensus 456 ~~~~~~F~~~d~~~~g~l~~~e~~~~l~~~-g~~~~~~~~~~~~~~~~~~~~d~-~~~g~I~~~eF~~~~~~ 525 (599)
.++..+|..+.. ++.++.++|...|+.. |... .+...+..++..+.. ...+.++++.|..++..
T Consensus 25 ~ei~~if~~~~~--~~~mt~~~l~~FL~~~Q~~~~----~~~~~~~~ii~~~~~~~~~~~~~~~gF~~yL~s 90 (581)
T PLN02222 25 REIKTIFEKYSE--NGVMTVDHLHRFLIDVQKQDK----ATREDAQSIINSASSLLHRNGLHLDAFFKYLFG 90 (581)
T ss_pred HHHHHHHHHhcC--CCCcCHHHHHHHHHHhcCCcc----CCHHHHHHHHHhhhhhhhccCcCHHHHHHHhcC
Confidence 577888888863 4799999999999764 4321 156677888887632 23567999999999865
No 236
>PF11802 CENP-K: Centromere-associated protein K; InterPro: IPR020993 Cenp-K is one of seven new Cenp-A-nucleosome distal (CAD) centromere components (the others being Cenp-L, Cenp-O, Cenp-P, Cenp-Q, Cenp-R and Cenp-S) that are identified as assembling on the Cenp-A nucleosome associated complex, NAC []. The Cenp-A NAC is essential, as disruption of the complex causes errors of chromosome alignment and segregation that preclude cell survival despite continued centromere-derived mitotic checkpoint signalling. Cenp-K is centromere-associated through its interaction with one or more components of the Cenp-A NAC.; GO: 0005634 nucleus
Probab=20.13 E-value=7.9e+02 Score=23.69 Aligned_cols=94 Identities=17% Similarity=0.215 Sum_probs=62.7
Q ss_pred HHHHHHHHHhHHHHhhHHHHHHHHhHHHHHHHHHHHHHHhhcCCCCCCCCCCCCChHHHHHHHHHHHHhhHhHhHHHHHH
Q psy12562 249 EEIQGLIDAHSQFKATLGEADKEYNSIVNLVREVESTVQQYQIPGGLENPYTALTANDLTKKWTDVRKLVPQRDTTLQAE 328 (599)
Q Consensus 249 ~~v~~ll~~h~~l~~el~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~w~~L~~~~~~R~~~L~~~ 328 (599)
..+.-++-+-+.+.+++..++.+...|......+.-... ...++.+....+.+...+..+...|.+.
T Consensus 52 ~ql~ll~~~~k~L~aE~~qwqk~~peii~~n~~VL~~lg-------------keelqkl~~eLe~vLs~~q~KnekLke~ 118 (268)
T PF11802_consen 52 AQLSLLMMRVKCLTAELEQWQKRTPEIIPLNPEVLLTLG-------------KEELQKLISELEMVLSTVQSKNEKLKED 118 (268)
T ss_pred hhHHHHHHHHHHHHHHHHHHHhcCCCcCCCCHHHHHHHH-------------HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444566777788889998888766655555444322111 1236677778888888899999999988
Q ss_pred HHhhcchHHHHHHHHHHhchhhhhHHHHHHHHhh
Q psy12562 329 LRKQQNNETLRRQFAEKANQVGPWIERQMDAVTS 362 (599)
Q Consensus 329 l~~~~~~~~l~~~f~~~~~~~~~Wl~e~~~~l~~ 362 (599)
+.| -+++..+..++..=+......+..
T Consensus 119 Ler-------Eq~wL~Eqqql~~sL~~r~~elk~ 145 (268)
T PF11802_consen 119 LER-------EQQWLDEQQQLLESLNKRHEELKN 145 (268)
T ss_pred HHH-------HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 884 455666666666666665555543
Done!