BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= psy12566
         (220 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q179T2|MUT7_AEDAE Probable exonuclease mut-7 homolog OS=Aedes aegypti GN=AAEL005527
           PE=3 SV=1
          Length = 719

 Score =  100 bits (250), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 74/229 (32%), Positives = 118/229 (51%), Gaps = 20/229 (8%)

Query: 1   MALDIVKD-NPELQKELIDLCVQYYDCKEAYYWCQKFKLNPNCVGFDLRDKIAEEESEQD 59
           M  D V + + ELQ EL+ LC  + D  EA  W   ++L  + +   ++D I E+E  + 
Sbjct: 349 MVRDTVSETDRELQLELVCLCSNFNDQPEAAKWAFHYQLKRSDLPLLVQDYILEQEGNKQ 408

Query: 60  V------DNGWDVCKPAEEYYSLTLPPNSIILVDTADKFASALQDFARLDHNSHLGLDTE 113
                  D  WD    +E  ++L L  + + LVD+ DKF + L D  R    S +  D+E
Sbjct: 409 APRTDFDDEQWD-APDSEPAHTLRLDESHVHLVDSKDKFYAMLSDLCR---QSMIAFDSE 464

Query: 114 WKPNLSGGSPPTLALLQIATRDRVYILDIITLSKLPC-YAQLCHDLELIVFANDDLLKIG 172
           WKP   G +   ++L+Q+AT D VY++D++     P  +A L  +    VF  DD+LK+ 
Sbjct: 465 WKPTFGGAN--EVSLIQLATWDDVYMIDVMVSQLEPLDWAALAKN----VFNRDDVLKLS 518

Query: 173 FNLMPDVSIIKTSLPFSEC--SSYNKTSYLDLQLLWSKLVAETTLQLPY 219
           F    D+S+ + +LP      SS + ++ LDLQLLW  +    + + PY
Sbjct: 519 FAPSTDISMFQKALPSFNVMYSSQSTSAILDLQLLWRHVERFDSFRFPY 567


>sp|Q9VIF1|MUT7_DROME Probable exonuclease mut-7 homolog OS=Drosophila melanogaster
           GN=CG9247 PE=1 SV=1
          Length = 625

 Score = 73.2 bits (178), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 58/221 (26%), Positives = 110/221 (49%), Gaps = 22/221 (9%)

Query: 9   NPELQKELIDLCVQYYDCKEAYYWCQKFKLNPNCVGFDLRDKIAEEESEQDVDNGWDVCK 68
           N EL+ + +          EA YW  +F ++P     ++  ++++  + +   +GW+   
Sbjct: 331 NHELRTDFVKYLASAGAHSEAIYWYTEFNIDPKDCPLEIETQVSQNGAGKA--SGWE--S 386

Query: 69  PAEE---------YYSLTLPPNSIILVDTADKFASALQDFARLDHNSHLGLDTEWKPNLS 119
           P +E         Y ++ LP   +I+V+ AD+F   L     L     + LD+EW  ++ 
Sbjct: 387 PGKERCPSSRCDMYLTMDLPDECLIIVNKADEFDRMLY---HLQQECVIYLDSEWMQSVC 443

Query: 120 GGSPPTLALLQIATRDRVYILDIITLSKLPCYAQLCHDLELIVFANDDLLKIGFNLMPDV 179
           G +   L +LQIAT   VY++D +    L   ++    L   +F N ++ K+GF+++ D+
Sbjct: 444 GDN--QLCVLQIATGHNVYLIDCLARESLR--SEHWRLLGANIFNNVNIRKVGFSMVSDL 499

Query: 180 SIIKTSLPFSECSSYNKTSYLDLQLLWSKLVAET-TLQLPY 219
           S+++ SLP  +        YLDL+ LW +L  +   ++LP+
Sbjct: 500 SVLQRSLPL-QLRLQMPHHYLDLRNLWLELKKQRFGVELPF 539


>sp|Q8N9H8|MUT7_HUMAN Probable exonuclease mut-7 homolog OS=Homo sapiens GN=EXD3 PE=1
           SV=3
          Length = 876

 Score = 63.2 bits (152), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 49/189 (25%), Positives = 89/189 (47%), Gaps = 9/189 (4%)

Query: 5   IVKDNPELQKELIDLCVQYYDCKEAYYWCQKFKLN----PNCVGFDLRDKIAEEESEQDV 60
           +V  +P LQ++L  L V + D   A     +  L     P  V  +LR +   +    + 
Sbjct: 292 LVGQSPWLQEQLSQLLVSHSDPVTAAQCAMELLLPEERLPAAVAVELR-RFRLQGRATEA 350

Query: 61  DNGWDVCKPAEEYYSLTLPPNSIILVDTADKFASALQDFARLDHNSHLGLDTEWKPNLSG 120
           D+  +V    + YY L +P  ++ L+ + +       + A L  +  +G+D EW P    
Sbjct: 351 DSRLEVKDMKDRYYQLPIPRENVHLLASWEDLTR--HEGALLQCHQVVGVDVEWTPVFVA 408

Query: 121 GSPPTLALLQIATRDRVYILDIITLSKLPC--YAQLCHDLELIVFANDDLLKIGFNLMPD 178
           G  P  +LLQ+A    V++LD++ LS+ P    AQ    L   + ++  + K+G+ ++ D
Sbjct: 409 GGRPRPSLLQVAVEGHVFLLDVLALSQPPTGQGAQAFSRLVAQLLSDPSITKLGYGMVGD 468

Query: 179 VSIIKTSLP 187
           +  + TS P
Sbjct: 469 LQKLGTSCP 477


>sp|P34607|MUT7_CAEEL Probable exonuclease mut-7 OS=Caenorhabditis elegans GN=mut-7 PE=1
           SV=1
          Length = 910

 Score = 36.6 bits (83), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 19/79 (24%), Positives = 41/79 (51%), Gaps = 1/79 (1%)

Query: 107 HLGLDTEWKP-NLSGGSPPTLALLQIATRDRVYILDIITLSKLPCYAQLCHDLELIVFAN 165
           ++G D+EWKP NL+      +A++Q+  ++ V+++D + L K              +F +
Sbjct: 431 YVGFDSEWKPSNLTAVHDSKIAIIQLFFKNCVWLVDCVELEKANMADDWWQKFASRLFGD 490

Query: 166 DDLLKIGFNLMPDVSIIKT 184
             +  +GF++  D+  + T
Sbjct: 491 SPVKVVGFDMRNDLDAMAT 509


>sp|Q01406|SRC8_CHICK Src substrate protein p85 OS=Gallus gallus GN=CTTN1 PE=1 SV=1
          Length = 563

 Score = 34.7 bits (78), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 23/91 (25%), Positives = 39/91 (42%), Gaps = 17/91 (18%)

Query: 14  KELIDLCVQYYDCKEAY---YWCQKFKLNPNCVGFDLRDKIAEEESEQDVDNGWDVCKPA 70
           +E + L     D K  +   +  Q  + +P+ VGFD ++K+A+ ES+QD           
Sbjct: 262 QEKVQLHESQKDYKSGFGGKFGVQTERQDPSAVGFDYKEKLAKHESQQD----------- 310

Query: 71  EEYYSLTLPPNSIILVDTADKFASALQDFAR 101
              YS        +  D  DK A+  +D  +
Sbjct: 311 ---YSKGFGGKYGVQKDRMDKNAATFEDIEK 338


>sp|P34603|YO63_CAEEL Uncharacterized protein ZK1098.3 OS=Caenorhabditis elegans
           GN=ZK1098.3 PE=4 SV=2
          Length = 784

 Score = 33.1 bits (74), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 18/79 (22%), Positives = 43/79 (54%), Gaps = 1/79 (1%)

Query: 107 HLGLDTEWKP-NLSGGSPPTLALLQIATRDRVYILDIITLSKLPCYAQLCHDLELIVFAN 165
           ++G D+E+KP +L   S   LA++Q+  +D+ ++++ + +  L     +   L   +F +
Sbjct: 446 YIGYDSEFKPYHLIDVSTSRLAIIQLFFKDKAWLINCVAIDNLASRDDVWIRLYKGLFES 505

Query: 166 DDLLKIGFNLMPDVSIIKT 184
           +    +GF++  D+  + T
Sbjct: 506 NKFSIVGFDIRQDIEAMFT 524


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.320    0.137    0.423 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 84,719,926
Number of Sequences: 539616
Number of extensions: 3428122
Number of successful extensions: 6831
Number of sequences better than 100.0: 10
Number of HSP's better than 100.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 6818
Number of HSP's gapped (non-prelim): 13
length of query: 220
length of database: 191,569,459
effective HSP length: 113
effective length of query: 107
effective length of database: 130,592,851
effective search space: 13973435057
effective search space used: 13973435057
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 59 (27.3 bits)