Your job contains 1 sequence.
>psy12566
MALDIVKDNPELQKELIDLCVQYYDCKEAYYWCQKFKLNPNCVGFDLRDKIAEEESEQDV
DNGWDVCKPAEEYYSLTLPPNSIILVDTADKFASALQDFARLDHNSHLGLDTEWKPNLSG
GSPPTLALLQIATRDRVYILDIITLSKLPCYAQLCHDLELIVFANDDLLKIGFNLMPDVS
IIKTSLPFSECSSYNKTSYLDLQLLWSKLVAETTLQLPYK
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy12566
(220 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0032924 - symbol:Nbr "Nibbler" species:7227 "Droso... 198 8.2e-15 1
ZFIN|ZDB-GENE-091204-349 - symbol:exd3 "exonuclease 3'-5'... 175 2.6e-13 2
UNIPROTKB|E1BWV5 - symbol:EXD3 "Uncharacterized protein" ... 165 1.9e-12 2
UNIPROTKB|Q8N9H8 - symbol:EXD3 "Probable exonuclease mut-... 161 1.3e-10 1
TAIR|locus:2152871 - symbol:AT5G24340 species:3702 "Arabi... 120 8.3e-05 1
UNIPROTKB|G3X7J6 - symbol:G3X7J6 "Uncharacterized protein... 117 0.00030 1
>FB|FBgn0032924 [details] [associations]
symbol:Nbr "Nibbler" species:7227 "Drosophila melanogaster"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0044748
"3'-5'-exoribonuclease activity involved in mature miRNA 3'-end
processing" evidence=IMP] [GO:0044747 "mature miRNA 3'-end
processing" evidence=IMP] [GO:0030529 "ribonucleoprotein complex"
evidence=IDA] InterPro:IPR002562 InterPro:IPR012337 Pfam:PF01612
SMART:SM00474 EMBL:AE014134 GO:GO:0003676 GO:GO:0030529
SUPFAM:SSF53098 GO:GO:0000175 GO:GO:0035196 eggNOG:NOG241966
GeneTree:ENSGT00390000006843 EMBL:AY118462 RefSeq:NP_610094.1
UniGene:Dm.30864 ProteinModelPortal:Q9VIF1 SMR:Q9VIF1 IntAct:Q9VIF1
MINT:MINT-282622 PaxDb:Q9VIF1 PRIDE:Q9VIF1
EnsemblMetazoa:FBtr0081499 GeneID:35385 KEGG:dme:Dmel_CG9247
UCSC:CG9247-RA FlyBase:FBgn0032924 InParanoid:Q9VIF1 OMA:AIDARCL
OrthoDB:EOG4X69QB PhylomeDB:Q9VIF1 GenomeRNAi:35385 NextBio:793268
Bgee:Q9VIF1 GO:GO:0043628 Uniprot:Q9VIF1
Length = 625
Score = 198 (74.8 bits), Expect = 8.2e-15, P = 8.2e-15
Identities = 57/219 (26%), Positives = 110/219 (50%)
Query: 9 NPELQKELIDLCVQYYDCKEAYYWCQKFKLNPNCVGFDLRDKIAEEESEQDVDNGWDV-- 66
N EL+ + + EA YW +F ++P ++ ++++ + + +GW+
Sbjct: 331 NHELRTDFVKYLASAGAHSEAIYWYTEFNIDPKDCPLEIETQVSQNGAGKA--SGWESPG 388
Query: 67 ---CKPA--EEYYSLTLPPNSIILVDTADKFASALQDFARLDHNSHLGLDTEWKPNLSGG 121
C + + Y ++ LP +I+V+ AD+F L L + LD+EW ++ G
Sbjct: 389 KERCPSSRCDMYLTMDLPDECLIIVNKADEFDRMLY---HLQQECVIYLDSEWMQSVCGD 445
Query: 122 SPPTLALLQIATRDRVYILDIITLSKLPCYAQLCHDLELIVFANDDLLKIGFNLMPDVSI 181
+ L +LQIAT VY++D + L ++ L +F N ++ K+GF+++ D+S+
Sbjct: 446 NQ--LCVLQIATGHNVYLIDCLARESLR--SEHWRLLGANIFNNVNIRKVGFSMVSDLSV 501
Query: 182 IKTSLPFSECSSYNKTSYLDLQLLWSKLVAETT-LQLPY 219
++ SLP + YLDL+ LW +L + ++LP+
Sbjct: 502 LQRSLPL-QLRLQMPHHYLDLRNLWLELKKQRFGVELPF 539
>ZFIN|ZDB-GENE-091204-349 [details] [associations]
symbol:exd3 "exonuclease 3'-5' domain containing 3"
species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0006139 "nucleobase-containing compound metabolic
process" evidence=IEA] [GO:0008408 "3'-5' exonuclease activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
InterPro:IPR002562 InterPro:IPR012337 Pfam:PF01612 SMART:SM00474
ZFIN:ZDB-GENE-091204-349 GO:GO:0003676 GO:GO:0005622
SUPFAM:SSF53098 GO:GO:0008408 GeneTree:ENSGT00390000006843
InterPro:IPR002782 Pfam:PF01927 EMBL:BX005370 IPI:IPI00491719
Ensembl:ENSDART00000092011 Uniprot:E7EY45
Length = 861
Score = 175 (66.7 bits), Expect = 2.6e-13, Sum P(2) = 2.6e-13
Identities = 54/214 (25%), Positives = 102/214 (47%)
Query: 5 IVKDNPELQKELIDLCVQYYDCKEAYYWCQKFKLNPNCVGFDLRDKIAEEESEQDVDNG- 63
+++ + ELQ +L+ L V++ K A W +KL N + + DKI + S Q ++ G
Sbjct: 286 MIEGDLELQVQLVQLLVKHCSLKAAAQWSAHYKLPRNRLPIGVWDKI-QSLSPQQLELGS 344
Query: 64 -------W-DVCKPAEEYYSLTLPPNSIILVDTADKFASALQDFARLDHNSHLGLDTEWK 115
W + E+YY L LP ++ V+T ++ + A L S +G+D EW+
Sbjct: 345 VSGPPESWAPLQSDQEKYYQLPLPRENVHFVETLEEVDKCRE--AVLKSGSVVGMDMEWR 402
Query: 116 PNLSGGSPPTLALLQIATRDRVYILDIITLSKLPCYAQLCHDLELIVFANDDLLKIGFNL 175
S +AL+Q+A +D+V++LD+ + + D + ++ +LK+G+ +
Sbjct: 403 AGFGTVSSQRVALIQLAVQDQVFLLDLC--AHAISHHSTTVDFIRALLSDKKILKLGYGM 460
Query: 176 MPDVSIIKTSLPFSECSSYNKTSYLDLQLLWSKL 209
D+ + ++ P LDL L+ +L
Sbjct: 461 SGDLRSLVSTWPDLREEPMKMEGVLDLLLIHQEL 494
Score = 36 (17.7 bits), Expect = 2.6e-13, Sum P(2) = 2.6e-13
Identities = 6/14 (42%), Positives = 11/14 (78%)
Query: 6 VKDNPELQKELIDL 19
V+ +P+LQ+ L+ L
Sbjct: 182 VRHHPDLQQRLVSL 195
>UNIPROTKB|E1BWV5 [details] [associations]
symbol:EXD3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0008408 "3'-5'
exonuclease activity" evidence=IEA] InterPro:IPR002562
InterPro:IPR012337 Pfam:PF01612 SMART:SM00474 GO:GO:0003676
GO:GO:0005622 SUPFAM:SSF53098 GO:GO:0008408
GeneTree:ENSGT00390000006843 InterPro:IPR002782 Pfam:PF01927
OMA:QENWADH EMBL:AADN02026991 EMBL:AADN02026982 EMBL:AADN02026983
EMBL:AADN02026965 EMBL:AADN02026966 EMBL:AADN02026967
EMBL:AADN02026968 EMBL:AADN02026969 EMBL:AADN02026970
EMBL:AADN02026971 EMBL:AADN02026972 EMBL:AADN02026973
EMBL:AADN02026974 EMBL:AADN02026975 EMBL:AADN02026976
EMBL:AADN02026977 EMBL:AADN02026978 EMBL:AADN02026979
EMBL:AADN02026980 EMBL:AADN02026981 EMBL:AADN02026984
EMBL:AADN02026985 EMBL:AADN02026986 EMBL:AADN02026987
EMBL:AADN02026988 EMBL:AADN02026989 EMBL:AADN02026990
EMBL:AADN02026992 EMBL:AADN02026993 EMBL:AADN02026994
EMBL:AADN02039946 IPI:IPI00573845 ProteinModelPortal:E1BWV5
Ensembl:ENSGALT00000014570 Uniprot:E1BWV5
Length = 725
Score = 165 (63.1 bits), Expect = 1.9e-12, Sum P(2) = 1.9e-12
Identities = 55/215 (25%), Positives = 104/215 (48%)
Query: 6 VKDNPELQKELIDLCVQYYDCKEAYYWCQKFKLNPNCVGFDLRDKIAEEESEQDVD---- 61
V +N LQ LI L ++Y D A W Q+ L + ++ D++ + E ++ V+
Sbjct: 287 VGENRWLQGHLIQLLLRYCDLNTAARWAQRCSLPEEVLPSEVADELQKLEIQERVEEATK 346
Query: 62 --NGWDVCKPAEEYYSLTLPPNSIILVDTADKFASALQDFARLDHNSHLGLDTEWKPNLS 119
N +V K ++YY L +P +I L+ ++ + L +G+D EW+P+
Sbjct: 347 EENYKEVKK--KDYYQLPIPRANIRLLQNWEEMMQCYEKV--LKPGQIVGIDMEWRPSFG 402
Query: 120 GGSPPTLALLQIATRDRVYILDIITLSKLPCYA----QLCHDLELIVFANDDLLKIGFNL 175
P ++LLQ+A RD V++LD+ L + +L H ++ + +++ + K+G+ +
Sbjct: 403 MVGKPRVSLLQLAVRDEVFLLDLPRLLEQAEVKGEKEKLPHFIQRL-YSDATITKLGYGM 461
Query: 176 MPDVSIIKTSLPFSECSSYNKTSYLDLQLLWSKLV 210
D+S + + + S +DL L KLV
Sbjct: 462 SGDLSSLAATCSTLKGMDKQSQSVVDL-LTIDKLV 495
Score = 36 (17.7 bits), Expect = 1.9e-12, Sum P(2) = 1.9e-12
Identities = 7/16 (43%), Positives = 11/16 (68%)
Query: 4 DIVKDNPELQKELIDL 19
D V + PELQ L+++
Sbjct: 182 DYVAEYPELQCRLLEI 197
>UNIPROTKB|Q8N9H8 [details] [associations]
symbol:EXD3 "Probable exonuclease mut-7 homolog"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0008408
"3'-5' exonuclease activity" evidence=IEA] InterPro:IPR002562
InterPro:IPR012337 Pfam:PF01612 SMART:SM00474 GO:GO:0003676
GO:GO:0005622 GO:GO:0090305 SUPFAM:SSF53098 GO:GO:0008408
EMBL:BX322799 UniGene:Hs.495553 GeneCards:GC09M140201
HGNC:HGNC:26023 ChiTaRS:EXD3 eggNOG:NOG241966 InterPro:IPR002782
Pfam:PF01927 EMBL:AB061798 EMBL:AK055004 EMBL:AK094438
EMBL:BC037355 EMBL:BC110879 IPI:IPI00413242 IPI:IPI00884892
IPI:IPI00884936 IPI:IPI00885207 RefSeq:NP_060290.3 HSSP:Q14191
ProteinModelPortal:Q8N9H8 SMR:Q8N9H8 STRING:Q8N9H8 DMDM:308153580
PeptideAtlas:Q2TAK4 PRIDE:Q8N9H8 Ensembl:ENST00000340951
Ensembl:ENST00000342129 Ensembl:ENST00000479452 GeneID:54932
KEGG:hsa:54932 UCSC:uc004cmp.2 UCSC:uc004cmr.3 UCSC:uc010ncf.1
CTD:54932 HPA:HPA047395 neXtProt:NX_Q8N9H8 PharmGKB:PA164719422
HOVERGEN:HBG108161 InParanoid:Q8N9H8 OMA:QENWADH OrthoDB:EOG4MPHPR
GenomeRNAi:54932 NextBio:58039 ArrayExpress:Q8N9H8 Bgee:Q8N9H8
Genevestigator:Q8N9H8 Uniprot:Q8N9H8
Length = 876
Score = 161 (61.7 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 49/189 (25%), Positives = 89/189 (47%)
Query: 5 IVKDNPELQKELIDLCVQYYDCKEAYYWCQKFKLN----PNCVGFDLRDKIAEEESEQDV 60
+V +P LQ++L L V + D A + L P V +LR + + +
Sbjct: 292 LVGQSPWLQEQLSQLLVSHSDPVTAAQCAMELLLPEERLPAAVAVELR-RFRLQGRATEA 350
Query: 61 DNGWDVCKPAEEYYSLTLPPNSIILVDTADKFASALQDFARLDHNSHLGLDTEWKPNLSG 120
D+ +V + YY L +P ++ L+ + + + A L + +G+D EW P
Sbjct: 351 DSRLEVKDMKDRYYQLPIPRENVHLLASWEDLTR--HEGALLQCHQVVGVDVEWTPVFVA 408
Query: 121 GSPPTLALLQIATRDRVYILDIITLSKLPCY--AQLCHDLELIVFANDDLLKIGFNLMPD 178
G P +LLQ+A V++LD++ LS+ P AQ L + ++ + K+G+ ++ D
Sbjct: 409 GGRPRPSLLQVAVEGHVFLLDVLALSQPPTGQGAQAFSRLVAQLLSDPSITKLGYGMVGD 468
Query: 179 VSIIKTSLP 187
+ + TS P
Sbjct: 469 LQKLGTSCP 477
>TAIR|locus:2152871 [details] [associations]
symbol:AT5G24340 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0005622
"intracellular" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006139 "nucleobase-containing compound metabolic
process" evidence=IEA] [GO:0008408 "3'-5' exonuclease activity"
evidence=IEA;ISS] InterPro:IPR002562 InterPro:IPR012337
Pfam:PF01612 SMART:SM00474 EMBL:CP002688 EMBL:AB016884
GO:GO:0003676 GO:GO:0005622 SUPFAM:SSF53098 GO:GO:0008408
InterPro:IPR002782 Pfam:PF01927 EMBL:BT006449 EMBL:AK227650
IPI:IPI00549160 RefSeq:NP_197822.1 UniGene:At.30964
ProteinModelPortal:Q9FIN8 SMR:Q9FIN8 EnsemblPlants:AT5G24340.1
GeneID:832504 KEGG:ath:AT5G24340 TAIR:At5g24340
HOGENOM:HOG000242294 InParanoid:Q9FIN8 KO:K09122 OMA:NLEFWQC
PhylomeDB:Q9FIN8 ProtClustDB:CLSN2686327 Genevestigator:Q9FIN8
Uniprot:Q9FIN8
Length = 505
Score = 120 (47.3 bits), Expect = 8.3e-05, P = 8.3e-05
Identities = 40/139 (28%), Positives = 69/139 (49%)
Query: 83 IILVDTAD--KFASALQDFARLDHNSHLGLDTEWKPNLSGGSP-PTLALLQIATR----- 134
I LV + D +F F R ++ + LD EWKP S S PT+ LLQ+A R
Sbjct: 7 IYLVSSTDSSEFTHLKWSFTR---STIIALDAEWKPQHSNTSSFPTVTLLQVACRLSHAT 63
Query: 135 --DRVYILDIITLSKLPCYAQLCHDLELIVFANDDLLKIGFNLMPDVSIIKTSLPFSECS 192
V+++D+ ++ LP +L +D+ F + D+LK+GF D+ + ++ C
Sbjct: 64 DVSDVFLIDLSSIH-LPSVWELLNDM----FVSPDVLKLGFRFKQDLVYLSSTFTQHGCE 118
Query: 193 S-YNKTS-YLDLQLLWSKL 209
+ + YLD+ +++ L
Sbjct: 119 GGFQEVKQYLDITSIYNYL 137
>UNIPROTKB|G3X7J6 [details] [associations]
symbol:G3X7J6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008408 "3'-5' exonuclease activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR002562 InterPro:IPR012337
Pfam:PF01612 SMART:SM00474 GO:GO:0003676 GO:GO:0005622
SUPFAM:SSF53098 GO:GO:0008408 GeneTree:ENSGT00390000006843
OMA:QENWADH EMBL:DAAA02032393 EMBL:DAAA02032394
Ensembl:ENSBTAT00000032625 Uniprot:G3X7J6
Length = 724
Score = 117 (46.2 bits), Expect = 0.00030, P = 0.00030
Identities = 31/120 (25%), Positives = 60/120 (50%)
Query: 71 EEYYSLTLPPNSIILVDTADKFASALQDFARLDHNSHLGLDTEWKPNLSGGSPPTLALLQ 130
++ Y L + + I + + ++ A +D L +G+D EW+P+ G P ++L+Q
Sbjct: 357 DDCYQLPISRDDIYFLASWEELARH-ED-TLLQPGQVVGVDLEWRPSFGTGGRPRVSLMQ 414
Query: 131 IATRDRVYILDIITLSKLPCYAQLCHDLELIV---FANDDLLKIGFNLMPDVSIIKTSLP 187
+A RV++LD+ LS P Q +V ++ + K+G+ + D+ + TS P
Sbjct: 415 VAVEGRVFLLDLPRLSS-PAGGQGPRAFSQLVSQLLSDPSITKLGYGMAGDLRSLGTSYP 473
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.137 0.423 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 220 220 0.00094 112 3 11 22 0.39 33
32 0.40 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 6
No. of states in DFA: 607 (65 KB)
Total size of DFA: 203 KB (2114 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 19.40u 0.09s 19.49t Elapsed: 00:00:11
Total cpu time: 19.40u 0.09s 19.49t Elapsed: 00:00:11
Start: Thu Aug 15 13:56:19 2013 End: Thu Aug 15 13:56:30 2013