BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy12573
(315 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8CHM7|HACL1_RAT 2-hydroxyacyl-CoA lyase 1 OS=Rattus norvegicus GN=Hacl1 PE=1 SV=1
Length = 581
Score = 152 bits (384), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 66/98 (67%), Positives = 82/98 (83%)
Query: 5 ESVPLNYYAAIHAVQVSIPDNCIIVGEGANTMDIGRSLLLNNLPRHRLDAGTFGTMGVGL 64
+S+P+NYY + VQ +P NC IV EGANTMDIGR++L N LPRHRLDAG+FGTMGVGL
Sbjct: 374 KSLPMNYYTVFYHVQEQLPRNCFIVSEGANTMDIGRTVLQNYLPRHRLDAGSFGTMGVGL 433
Query: 65 GFALAAALYCNHYAPGKRVVCVQGDSAFGFSGMELETL 102
GFA+AAA+ +PG+RV+CV+GDSAFGFSGME+ET+
Sbjct: 434 GFAIAAAVVAKERSPGQRVICVEGDSAFGFSGMEVETI 471
>sp|Q9D7J9|ECHD3_MOUSE Enoyl-CoA hydratase domain-containing protein 3, mitochondrial
OS=Mus musculus GN=Echdc3 PE=2 SV=1
Length = 300
Score = 150 bits (379), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 76/145 (52%), Positives = 101/145 (69%), Gaps = 1/145 (0%)
Query: 171 LVSTCSDLMLSILRHPVPILAIISGVAAAAGCQLVATCDLAIATTASKFSTPGARHGIFC 230
+ TCS++M+ I HPVPILA+++G+A AAGCQLVA+CD+A+A+ S F+TPG G+FC
Sbjct: 124 VFQTCSEVMMLIRNHPVPILAMVNGLATAAGCQLVASCDIAVASDKSSFATPGVNVGLFC 183
Query: 231 STPAVALTRKVPLGVVRSMTITGIPISAQDAYNAGLITRVVSSNEELESETKVLTSAILE 290
STPAVAL R VP V M TG PISAQ+A GLI++VV E+LE+ET + I
Sbjct: 184 STPAVALGRAVPRKVALEMLFTGEPISAQEALRHGLISKVV-PEEQLEAETMRIAKKISS 242
Query: 291 NSRSVLTLGKQFLYQQMSLNIEEAY 315
SRSV+ LGK Y+Q+ ++ AY
Sbjct: 243 LSRSVVALGKATFYKQLPQDLRTAY 267
>sp|Q9UJ83|HACL1_HUMAN 2-hydroxyacyl-CoA lyase 1 OS=Homo sapiens GN=HACL1 PE=1 SV=2
Length = 578
Score = 148 bits (373), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 63/99 (63%), Positives = 81/99 (81%)
Query: 4 DESVPLNYYAAIHAVQVSIPDNCIIVGEGANTMDIGRSLLLNNLPRHRLDAGTFGTMGVG 63
+S+P+NYY + VQ +P +C +V EGANTMDIGR++L N LPRHRLDAGTFGTMGVG
Sbjct: 370 KKSLPMNYYTVFYHVQEQLPRDCFVVSEGANTMDIGRTVLQNYLPRHRLDAGTFGTMGVG 429
Query: 64 LGFALAAALYCNHYAPGKRVVCVQGDSAFGFSGMELETL 102
LGFA+AAA+ +PG+ ++CV+GDSAFGFSGME+ET+
Sbjct: 430 LGFAIAAAVVAKDRSPGQWIICVEGDSAFGFSGMEVETI 468
>sp|Q9QXE0|HACL1_MOUSE 2-hydroxyacyl-CoA lyase 1 OS=Mus musculus GN=Hacl1 PE=1 SV=2
Length = 581
Score = 147 bits (371), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 65/99 (65%), Positives = 81/99 (81%)
Query: 4 DESVPLNYYAAIHAVQVSIPDNCIIVGEGANTMDIGRSLLLNNLPRHRLDAGTFGTMGVG 63
+S+P+NYY + VQ +P + IV EGANTMDIGR++L N LPRHRLDAG+FGTMGVG
Sbjct: 373 QKSLPMNYYTVFYHVQEQLPRDSFIVSEGANTMDIGRTMLQNCLPRHRLDAGSFGTMGVG 432
Query: 64 LGFALAAALYCNHYAPGKRVVCVQGDSAFGFSGMELETL 102
LGFA+AAAL +PG+RV+CV+GDSAFGFSGME+ET+
Sbjct: 433 LGFAIAAALVAKDRSPGQRVICVEGDSAFGFSGMEVETI 471
>sp|Q3MIE0|ECHD3_RAT Enoyl-CoA hydratase domain-containing protein 3, mitochondrial
OS=Rattus norvegicus GN=Echdc3 PE=2 SV=1
Length = 300
Score = 147 bits (371), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 74/148 (50%), Positives = 100/148 (67%), Gaps = 1/148 (0%)
Query: 168 YNILVSTCSDLMLSILRHPVPILAIISGVAAAAGCQLVATCDLAIATTASKFSTPGARHG 227
+ + TCS++M+ I HPVPI+A+++G+A AAGCQLVA+CD+A+A+ S F+TPG G
Sbjct: 121 HTEVFQTCSEVMMLIRNHPVPIVAMVNGLATAAGCQLVASCDIAVASDKSSFATPGVNVG 180
Query: 228 IFCSTPAVALTRKVPLGVVRSMTITGIPISAQDAYNAGLITRVVSSNEELESETKVLTSA 287
+FCSTPAVAL R VP V M TG PISAQ+A GLI++VV E+LE E +
Sbjct: 181 LFCSTPAVALGRAVPRKVALEMLFTGEPISAQEALRHGLISKVV-PEEQLEEEATRIAKK 239
Query: 288 ILENSRSVLTLGKQFLYQQMSLNIEEAY 315
I SRSV+ LGK Y+Q+ ++ AY
Sbjct: 240 IASLSRSVVALGKATFYKQLPQDLSTAY 267
>sp|Q96DC8|ECHD3_HUMAN Enoyl-CoA hydratase domain-containing protein 3, mitochondrial
OS=Homo sapiens GN=ECHDC3 PE=1 SV=2
Length = 303
Score = 141 bits (356), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 71/145 (48%), Positives = 98/145 (67%), Gaps = 1/145 (0%)
Query: 171 LVSTCSDLMLSILRHPVPILAIISGVAAAAGCQLVATCDLAIATTASKFSTPGARHGIFC 230
+ TCS +M+ I HPVP++A+++G+AAAAGCQLVA+CD+A+A+ S F+TPG G+FC
Sbjct: 124 VFQTCSKVMMHIRNHPVPVIAMVNGLAAAAGCQLVASCDIAVASDKSSFATPGVNVGLFC 183
Query: 231 STPAVALTRKVPLGVVRSMTITGIPISAQDAYNAGLITRVVSSNEELESETKVLTSAILE 290
STP VAL R VP V M TG PISAQ+A GL+++VV EL+ ET + I
Sbjct: 184 STPGVALARAVPRKVALEMLFTGEPISAQEALLHGLLSKVV-PEAELQEETMRIARKIAS 242
Query: 291 NSRSVLTLGKQFLYQQMSLNIEEAY 315
SR V++LGK Y+Q+ ++ AY
Sbjct: 243 LSRPVVSLGKATFYKQLPQDLGTAY 267
>sp|A0PJR5|ECHD3_DANRE Enoyl-CoA hydratase domain-containing protein 3, mitochondrial
OS=Danio rerio GN=echdc3 PE=2 SV=2
Length = 289
Score = 141 bits (355), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 71/142 (50%), Positives = 98/142 (69%), Gaps = 1/142 (0%)
Query: 174 TCSDLMLSILRHPVPILAIISGVAAAAGCQLVATCDLAIATTASKFSTPGARHGIFCSTP 233
+CS+LM+ I PVP++A+++GVA AAGCQLVA+CD+A+A+ S F+TPG G+FCSTP
Sbjct: 110 SCSELMMLIQDLPVPVIAMVNGVATAAGCQLVASCDVAVASEKSTFATPGVNVGLFCSTP 169
Query: 234 AVALTRKVPLGVVRSMTITGIPISAQDAYNAGLITRVVSSNEELESETKVLTSAILENSR 293
AVA+ R VP + M +TG P+SAQ A GL++ V S E LE ET + + E+SR
Sbjct: 170 AVAIGRTVPRKIAMQMLLTGRPLSAQQALQHGLLS-AVFSEERLEDETLAIARRVCESSR 228
Query: 294 SVLTLGKQFLYQQMSLNIEEAY 315
V++LGKQ QMS + + AY
Sbjct: 229 PVVSLGKQIFNTQMSQSRDAAY 250
>sp|A9JS71|ECHD3_XENLA Enoyl-CoA hydratase domain-containing protein 3, mitochondrial
OS=Xenopus laevis GN=echdc3 PE=2 SV=1
Length = 294
Score = 136 bits (342), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 70/145 (48%), Positives = 97/145 (66%), Gaps = 1/145 (0%)
Query: 171 LVSTCSDLMLSILRHPVPILAIISGVAAAAGCQLVATCDLAIATTASKFSTPGARHGIFC 230
+ +TC+ LM PVP++A ++G+A AAGCQLVA+CD+A+A+ S+F+TPG G+FC
Sbjct: 117 VFNTCAKLMTLFQTLPVPVIAEVNGLATAAGCQLVASCDIAVASDKSRFATPGVNVGLFC 176
Query: 231 STPAVALTRKVPLGVVRSMTITGIPISAQDAYNAGLITRVVSSNEELESETKVLTSAILE 290
STP VAL R VP V M TG PISA DA GL+++VV E L+SET + I +
Sbjct: 177 STPGVALGRAVPRKVALEMLFTGEPISAHDALLHGLVSKVVPE-ENLKSETNRIALKICQ 235
Query: 291 NSRSVLTLGKQFLYQQMSLNIEEAY 315
S SV+ LGK Y+QM+ ++ +AY
Sbjct: 236 TSHSVVALGKSTFYRQMAKSLTDAY 260
>sp|Q9LF46|HACL_ARATH 2-hydroxyacyl-CoA lyase OS=Arabidopsis thaliana GN=HACL PE=2 SV=1
Length = 572
Score = 100 bits (249), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 51/100 (51%), Positives = 70/100 (70%), Gaps = 8/100 (8%)
Query: 7 VPLNYYAAIHAVQVSI----PDNCIIVGEGANTMDIGRSLLLNNLPRHRLDAGTFGTMGV 62
VP N+ + ++ +I + ++V EGANTMD+GRS+L+ PR RLDAGT+GTMGV
Sbjct: 375 VPFNFLTPMRIIRDAILAVEGPSPVVVSEGANTMDVGRSVLVQKEPRTRLDAGTWGTMGV 434
Query: 63 GLGFALAAALYCNHYAPGKRVVCVQGDSAFGFSGMELETL 102
GLG+ +AAA+ +P + VV V+GDS FGFS ME+ETL
Sbjct: 435 GLGYCIAAAV----ASPDRLVVAVEGDSGFGFSAMEVETL 470
>sp|Q54DA9|HACL1_DICDI Probable 2-hydroxyacyl-CoA lyase 1 OS=Dictyostelium discoideum
GN=hacl1 PE=3 SV=1
Length = 580
Score = 98.6 bits (244), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 50/94 (53%), Positives = 65/94 (69%), Gaps = 6/94 (6%)
Query: 9 LNYYAAIHAVQVS--IPDNCIIVGEGANTMDIGRSLLLNNLPRHRLDAGTFGTMGVGLGF 66
L Y+ +A++V ++ I V EGANTMDIGR + LPR RLDAGT TMGVG+G+
Sbjct: 385 LTYHKVFNALRVGGLFQEDTIFVNEGANTMDIGRLCIPQTLPRSRLDAGTLATMGVGVGY 444
Query: 67 ALAAALYCNHYAPGKRVVCVQGDSAFGFSGMELE 100
++AA + C P + VVC+QGDSAFGFS ME+E
Sbjct: 445 SVAAQI-C---FPDRSVVCIQGDSAFGFSAMEME 474
>sp|P0AFI0|OXC_ECOLI Probable oxalyl-CoA decarboxylase OS=Escherichia coli (strain K12)
GN=oxc PE=1 SV=1
Length = 564
Score = 93.6 bits (231), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/100 (46%), Positives = 69/100 (69%), Gaps = 7/100 (7%)
Query: 5 ESVPLNYYAAIHAVQVSIPDN--CIIVGEGANTMDIGRSLLLNNLPRHRLDAGTFGTMGV 62
++ PLNY+ A+ AV+ + +N +V EGANT+D R+++ PR RLD GT+G MG+
Sbjct: 366 DTQPLNYFNALSAVRDVLRENQDIYLVNEGANTLDNARNIIDMYKPRRRLDCGTWGVMGI 425
Query: 63 GLGFALAAALYCNHYAPGKRVVCVQGDSAFGFSGMELETL 102
G+G+A+ A++ G VV ++GDSAFGFSGME+ET+
Sbjct: 426 GMGYAIGASVTS-----GSPVVAIEGDSAFGFSGMEIETI 460
>sp|P0AFI1|OXC_ECO57 Probable oxalyl-CoA decarboxylase OS=Escherichia coli O157:H7
GN=oxc PE=3 SV=1
Length = 564
Score = 93.6 bits (231), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/100 (46%), Positives = 69/100 (69%), Gaps = 7/100 (7%)
Query: 5 ESVPLNYYAAIHAVQVSIPDN--CIIVGEGANTMDIGRSLLLNNLPRHRLDAGTFGTMGV 62
++ PLNY+ A+ AV+ + +N +V EGANT+D R+++ PR RLD GT+G MG+
Sbjct: 366 DTQPLNYFNALSAVRDVLRENQDIYLVNEGANTLDNARNIIDMYKPRRRLDCGTWGVMGI 425
Query: 63 GLGFALAAALYCNHYAPGKRVVCVQGDSAFGFSGMELETL 102
G+G+A+ A++ G VV ++GDSAFGFSGME+ET+
Sbjct: 426 GMGYAIGASVTS-----GSPVVAIEGDSAFGFSGMEIETI 460
>sp|Q9Y7M1|YGK4_SCHPO Putative 2-hydroxyacyl-CoA lyase OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPBC725.04 PE=3 SV=1
Length = 568
Score = 90.1 bits (222), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/106 (47%), Positives = 63/106 (59%), Gaps = 11/106 (10%)
Query: 3 QDESVPLNYYAAIHAVQVSIPD-------NCIIVGEGANTMDIGRSLLLNNLPRHRLDAG 55
+ S+PL A++ V + N V EGANTMD GR LL PR RLDAG
Sbjct: 358 RKSSIPLQMNYALYVVNEELQSLSLKSKRNITWVSEGANTMDRGRQLLEVTHPRGRLDAG 417
Query: 56 TFGTMGVGLGFALAAALYCNHYAPGKRVVCVQGDSAFGFSGMELET 101
T TMGVG+G+A+A+A + ++V V+GDSAFGFS MELET
Sbjct: 418 TMSTMGVGMGYAIASAFAHS----SDKIVVVEGDSAFGFSAMELET 459
>sp|P39994|YEC0_YEAST Putative 2-hydroxyacyl-CoA lyase OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=YEL020C PE=1 SV=1
Length = 560
Score = 88.6 bits (218), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 50/94 (53%), Positives = 58/94 (61%), Gaps = 5/94 (5%)
Query: 9 LNYYAAIHAVQVSIPD-NCIIVGEGANTMDIGRSLLLNNLPRHRLDAGTFGTMGVGLGFA 67
LNY ++ I D I+V EGANTMDI R + PR RLDAGT TMG+GLG+A
Sbjct: 369 LNYNQVYGTLRPLIDDYRTILVTEGANTMDIARISFPTDAPRRRLDAGTNATMGIGLGYA 428
Query: 68 LAAALYCNHYAPGKRVVCVQGDSAFGFSGMELET 101
LA C P VV +QGDSAFGFS ME+ET
Sbjct: 429 LA----CKASHPELDVVLIQGDSAFGFSAMEIET 458
>sp|P40149|OXC_OXAFO Oxalyl-CoA decarboxylase OS=Oxalobacter formigenes GN=oxc PE=1 SV=1
Length = 568
Score = 80.5 bits (197), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/97 (46%), Positives = 64/97 (65%), Gaps = 9/97 (9%)
Query: 9 LNYYAAIHAVQ---VSIPDNCIIVGEGANTMDIGRSLLLNNLPRHRLDAGTFGTMGVGLG 65
+NY ++ V+ ++ PD +V EGAN +D R ++ PR RLD+GT+G MG+G+G
Sbjct: 375 MNYSNSLGVVRDFMLANPD-ISLVNEGANALDNTRMIVDMLKPRKRLDSGTWGVMGIGMG 433
Query: 66 FALAAALYCNHYAPGKRVVCVQGDSAFGFSGMELETL 102
+ +AAA GK V+ V+GDSAFGFSGMELET+
Sbjct: 434 YCVAAAAVT-----GKPVIAVEGDSAFGFSGMELETI 465
>sp|P52046|CRT_CLOAB 3-hydroxybutyryl-CoA dehydratase OS=Clostridium acetobutylicum
(strain ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM
B-1787) GN=crt PE=3 SV=1
Length = 261
Score = 69.7 bits (169), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 111/234 (47%), Gaps = 25/234 (10%)
Query: 97 MELETLAVDKEG--------RPK-LDEIFSTC---SDLMLSILRHPVPILAIISGVAAAA 144
MEL + ++KEG RPK L+ + S D ++ + + +LA+I + A
Sbjct: 1 MELNNVILEKEGKVAVVTINRPKALNALNSDTLKEMDYVIGEIENDSEVLAVI--LTGAG 58
Query: 145 GCQLVATCDLAIATTASKFSTPGYNILVSTCSDLMLSILRHPVPILAIISGVAAAAGCQL 204
VA D++ + + IL + L +L PV +A ++G A GC++
Sbjct: 59 EKSFVAGADISEMKEMNTIEGRKFGILGNKVFR-RLELLEKPV--IAAVNGFALGGGCEI 115
Query: 205 VATCDLAIATTASKFSTPGARHGIFCSTPAVA----LTRKVPLGVVRSMTITGIPISAQD 260
+CD+ IA++ ++F P GI TP L+R V +G+ + + T I A +
Sbjct: 116 AMSCDIRIASSNARFGQPEVGLGI---TPGFGGTQRLSRLVGMGMAKQLIFTAQNIKADE 172
Query: 261 AYNAGLITRVVSSNEELESETKVLTSAILENSRSVLTLGKQFLYQQMSLNIEEA 314
A GL+ +VV + EL + K + + I+ N+ + L KQ + + M +I+ A
Sbjct: 173 ALRIGLVNKVVEPS-ELMNTAKEIANKIVSNAPVAVKLSKQAINRGMQCDIDTA 225
>sp|A6QQT9|ILVBL_BOVIN Acetolactate synthase-like protein OS=Bos taurus GN=ILVBL PE=2 SV=2
Length = 632
Score = 68.2 bits (165), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 62/129 (48%), Gaps = 28/129 (21%)
Query: 9 LNYYAAIHAVQVSIPDNCIIVGEGANTMDIGRSLLLNNLPRHRLDAGTFGTMGVGLGFAL 68
LN + V+ ++PDN I+V +G + + L+ P LD G FGT+GVG GFAL
Sbjct: 445 LNPVRVLQLVEDTLPDNSILVVDGGDFVGTAAYLVQPRGPLRWLDPGAFGTLGVGAGFAL 504
Query: 69 AAALYCNHYAPGKRVVCVQGDSAFGFSGMELETLAVDKEGRPKLDEIFSTCSDLMLSILR 128
A L C P V C+ GD AFG+S +E +T +R
Sbjct: 505 GAKL-CR---PDAEVWCLFGDGAFGYSLIEFDTF------------------------VR 536
Query: 129 HPVPILAII 137
H +P++A+I
Sbjct: 537 HKIPVMALI 545
>sp|A1L0T0|ILVBL_HUMAN Acetolactate synthase-like protein OS=Homo sapiens GN=ILVBL PE=1
SV=2
Length = 632
Score = 68.2 bits (165), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 53/98 (54%), Gaps = 4/98 (4%)
Query: 9 LNYYAAIHAVQVSIPDNCIIVGEGANTMDIGRSLLLNNLPRHRLDAGTFGTMGVGLGFAL 68
LN + V+ ++PDN I+V +G + + L+ P LD G FGT+GVG GFAL
Sbjct: 445 LNPVQVLQLVEETLPDNSILVVDGGDFVGTAAHLVQPRGPLRWLDPGAFGTLGVGAGFAL 504
Query: 69 AAALYCNHYAPGKRVVCVQGDSAFGFSGMELETLAVDK 106
A L C P V C+ GD AFG+S +E +T K
Sbjct: 505 GAKL-CR---PDAEVWCLFGDGAFGYSLIEFDTFVRHK 538
>sp|Q8BU33|ILVBL_MOUSE Acetolactate synthase-like protein OS=Mus musculus GN=Ilvbl PE=2
SV=1
Length = 632
Score = 67.0 bits (162), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 62/129 (48%), Gaps = 28/129 (21%)
Query: 9 LNYYAAIHAVQVSIPDNCIIVGEGANTMDIGRSLLLNNLPRHRLDAGTFGTMGVGLGFAL 68
LN + V+ ++PDN ++V +G + + L+ P LD G FGT+GVG GFAL
Sbjct: 445 LNPVWVLQQVEETLPDNALLVVDGGDFVATAAYLVQPRGPLRWLDPGAFGTLGVGAGFAL 504
Query: 69 AAALYCNHYAPGKRVVCVQGDSAFGFSGMELETLAVDKEGRPKLDEIFSTCSDLMLSILR 128
A L C P V C+ GD AFG+S +E +T +R
Sbjct: 505 GAKL-CQ---PEAEVWCLFGDGAFGYSLIEFDTF------------------------VR 536
Query: 129 HPVPILAII 137
H VP++A++
Sbjct: 537 HKVPVIALV 545
>sp|A4YI89|HPCD_METS5 3-hydroxypropionyl-coenzyme A dehydratase OS=Metallosphaera sedula
(strain ATCC 51363 / DSM 5348) GN=Msed_2001 PE=1 SV=1
Length = 259
Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 95/224 (42%), Gaps = 32/224 (14%)
Query: 97 MELETLAVDKEG--------RPKLDEIFSTCSDLMLSILR-------HPVPILAIISGVA 141
ME ET+ KEG RP D++ + + L+ + R P + II+G
Sbjct: 1 MEFETIETKKEGNLFWITLNRP--DKLNALNAKLLEELDRAVSQAESDPEIRVIIITGKG 58
Query: 142 AA--AGCQLVATCDLAIATTASKFSTPGYNILVSTCSDLMLSILRHPVPILAIISGVAAA 199
A AG + L A A KFS G I M I P +A+I+G A
Sbjct: 59 KAFCAGADITQFNQLTPAE-AWKFSKKGREI--------MDKIEALSKPTIAMINGYALG 109
Query: 200 AGCQLVATCDLAIATTASKFSTPGARHGIFCSTPAVA-LTRKVPLGVVRSMTITGIPISA 258
G +L CD+ IA ++ P GI+ LTR + G M +TG I
Sbjct: 110 GGLELALACDIRIAAEEAQLGLPEINLGIYPGYGGTQRLTRVIGKGRALEMMMTGDRIPG 169
Query: 259 QDAYNAGLITRVVS-SNEELESETKVLTSAILENSRSVLTLGKQ 301
+DA GL+ RVV +N LE ET+ L I + S L L K+
Sbjct: 170 KDAEKYGLVNRVVPLAN--LEQETRKLAEKIAKKSPISLALIKE 211
>sp|O07137|ECHA8_MYCLE Probable enoyl-CoA hydratase echA8 OS=Mycobacterium leprae (strain
TN) GN=echA8 PE=3 SV=1
Length = 257
Score = 60.5 bits (145), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 66/130 (50%), Gaps = 8/130 (6%)
Query: 188 PILAIISGVAAAAGCQLVATCDLAIATTASKFSTPGARHGIFCSTPAVA----LTRKVPL 243
P++A ++G A GC+L CDL IA +KF P + G+ P + LTR +
Sbjct: 96 PMIAAVAGYALGGGCELAMMCDLLIAADTAKFGQPEIKLGVL---PGMGGSQRLTRAIGK 152
Query: 244 GVVRSMTITGIPISAQDAYNAGLITRVVSSNEELESETKVLTSAILENSRSVLTLGKQFL 303
+ +TG I A +A +GL++RVV ++ +L E K + + I + SRS + K+ +
Sbjct: 153 AKAMDLILTGRTIDAAEAERSGLVSRVVLAD-DLLPEAKAVATTISQMSRSATRMAKEAV 211
Query: 304 YQQMSLNIEE 313
+ + E
Sbjct: 212 NRSFESTLAE 221
Score = 37.0 bits (84), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 21/35 (60%)
Query: 132 PILAIISGVAAAAGCQLVATCDLAIATTASKFSTP 166
P++A ++G A GC+L CDL IA +KF P
Sbjct: 96 PMIAAVAGYALGGGCELAMMCDLLIAADTAKFGQP 130
>sp|Q8GB17|CAID_PROSL Carnitinyl-CoA dehydratase OS=Proteus sp. (strain LE138) GN=caiD
PE=1 SV=3
Length = 261
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 95/216 (43%), Gaps = 21/216 (9%)
Query: 109 RPKLDEIFSTCS----DLMLSILRHPVPILAIISGVAAAAGCQLVATCDLAIATTA---- 160
RPK + I + S ++ + P +AII+G C A DL A
Sbjct: 20 RPKANAIDAKTSHEMGEVFMRFRDDPSLRVAIITGAGERFFC---AGWDLKAAAEGEAPD 76
Query: 161 SKFSTPGYNILVSTCSDLMLSILRHPVPILAIISGVAAAAGCQLVATCDLAIATTASKFS 220
+ F G+ L + P++A I+G A G +L D+ I + + F+
Sbjct: 77 ADFGAGGFAGLTE--------LFDLNKPVIAAINGYAFGGGFELALAADMIICSDNASFA 128
Query: 221 TPGARHGIFCSTPAV-ALTRKVPLGVVRSMTITGIPISAQDAYNAGLITRVVSSNEELES 279
P A+ GI + V L +++P +V M +TG ++AQ+A G+ RVVS+ E ++S
Sbjct: 129 LPEAQLGIVPDSGGVLRLPKRLPPAIVNEMLMTGRRMNAQEALRWGIANRVVSATELMDS 188
Query: 280 ETKVLTSAILENSRSVLTLGKQFLYQQMSLNIEEAY 315
+ L I ++ + K+ L+IEE Y
Sbjct: 189 -ARELADQIANSAPLAVAALKEIYRATSELSIEEGY 223
>sp|B4EY26|CAID_PROMH Carnitinyl-CoA dehydratase OS=Proteus mirabilis (strain HI4320)
GN=caiD PE=3 SV=1
Length = 261
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 95/216 (43%), Gaps = 21/216 (9%)
Query: 109 RPKLDEIFSTCS----DLMLSILRHPVPILAIISGVAAAAGCQLVATCDLAIATTA---- 160
RPK + I + S ++ + P +AII+G C A DL A
Sbjct: 20 RPKANAIDAKTSHEMGEVFMRFRDDPSLRVAIITGAGERFFC---AGWDLKAAAEGEAPD 76
Query: 161 SKFSTPGYNILVSTCSDLMLSILRHPVPILAIISGVAAAAGCQLVATCDLAIATTASKFS 220
+ F G+ L + P++A I+G A G +L D+ I + + F+
Sbjct: 77 ADFGAGGFAGLTE--------LFDLNKPVIAAINGYAFGGGFELALAADMIICSDNASFA 128
Query: 221 TPGARHGIFCSTPAV-ALTRKVPLGVVRSMTITGIPISAQDAYNAGLITRVVSSNEELES 279
P A+ GI + V L +++P +V M +TG ++AQ+A G+ RVVS+ E ++S
Sbjct: 129 LPEAQLGIVPDSGGVLRLPKRLPPAIVNEMLMTGRRMNAQEALRWGIANRVVSATELMDS 188
Query: 280 ETKVLTSAILENSRSVLTLGKQFLYQQMSLNIEEAY 315
+ L I ++ + K+ L+IEE Y
Sbjct: 189 -ARELADQIANSAPLAVAALKEIYRATSELSIEEGY 223
>sp|P66946|ILVG_MYCTU Acetolactate synthase large subunit IlvG OS=Mycobacterium
tuberculosis GN=ilvG PE=1 SV=1
Length = 547
Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 55/95 (57%), Gaps = 7/95 (7%)
Query: 8 PLNYYAAIHAVQVSIPDNCIIVGEGANTMDIGRSLLLNNLPRHRLDAGTFGTMGVGLGFA 67
P+ YA + A+ D +++ G GR ++ + LP LD+G FG +G G G+A
Sbjct: 365 PMRVYAELAALLER--DALVVIDAGDFGSYAGR-MIDSYLPGCWLDSGPFGCLGSGPGYA 421
Query: 68 LAAALYCNHYAPGKRVVCVQGDSAFGFSGMELETL 102
LAA L P ++VV +QGD AFGFSGME +TL
Sbjct: 422 LAAKLA----RPQRQVVLLQGDGAFGFSGMEWDTL 452
>sp|P66947|ILVG_MYCBO Probable acetolactate synthase OS=Mycobacterium bovis (strain ATCC
BAA-935 / AF2122/97) GN=ilvG PE=3 SV=1
Length = 547
Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 55/95 (57%), Gaps = 7/95 (7%)
Query: 8 PLNYYAAIHAVQVSIPDNCIIVGEGANTMDIGRSLLLNNLPRHRLDAGTFGTMGVGLGFA 67
P+ YA + A+ D +++ G GR ++ + LP LD+G FG +G G G+A
Sbjct: 365 PMRVYAELAALLER--DALVVIDAGDFGSYAGR-MIDSYLPGCWLDSGPFGCLGSGPGYA 421
Query: 68 LAAALYCNHYAPGKRVVCVQGDSAFGFSGMELETL 102
LAA L P ++VV +QGD AFGFSGME +TL
Sbjct: 422 LAAKLA----RPQRQVVLLQGDGAFGFSGMEWDTL 452
>sp|O61856|ILVBL_CAEEL Acetolactate synthase-like protein OS=Caenorhabditis elegans
GN=T26C12.1 PE=3 SV=2
Length = 640
Score = 59.7 bits (143), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 62/128 (48%), Gaps = 13/128 (10%)
Query: 8 PLNYYAAIHAVQVSIPDNCIIVGEGANTMDIGRSLLLNNLPRHRLDAGTFGTMGVGLGFA 67
PLN+ + + S+PD+ I+V +G + + ++ P LD G FGT+GVG GFA
Sbjct: 454 PLNF---LRTLDQSLPDDAILVADGGDFVGSAAYIVRPRGPLQWLDPGAFGTLGVGGGFA 510
Query: 68 LAAALYCNHYAPGKRVVCVQGDSAFGFSGMELETLAVDKEGRPKLDEIFSTCSDL-MLSI 126
L A P + V + GD + G+S ME +T A R KL I +D I
Sbjct: 511 LGA----KTVYPKRPVYIIWGDGSCGYSLMEYDTFA-----RHKLPVIGIVGNDACWTQI 561
Query: 127 LRHPVPIL 134
R VP+
Sbjct: 562 AREQVPMF 569
>sp|Q8BH95|ECHM_MOUSE Enoyl-CoA hydratase, mitochondrial OS=Mus musculus GN=Echs1 PE=1
SV=1
Length = 290
Score = 58.9 bits (141), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 62/133 (46%), Gaps = 2/133 (1%)
Query: 182 ILRHPVPILAIISGVAAAAGCQLVATCDLAIATTASKFSTPGARHGIFCSTPAVA-LTRK 240
I R P++A ++G A GC+L CD+ A ++F P G LTR
Sbjct: 123 ITRVKKPVIAAVNGYALGGGCELAMMCDIIYAGEKAQFGQPEILLGTIPGAGGTQRLTRA 182
Query: 241 VPLGVVRSMTITGIPISAQDAYNAGLITRVVSSNEELESETKVLTSAILENSRSVLTLGK 300
V + M +TG ISAQDA AGL++++ E+L E I NS+ V+ + K
Sbjct: 183 VGKSLAMEMVLTGDRISAQDAKQAGLVSKIFPV-EKLVEEAIQCAEKIASNSKIVVAMAK 241
Query: 301 QFLYQQMSLNIEE 313
+ + + + E
Sbjct: 242 ESVNAAFEMTLTE 254
>sp|P64016|ECHA8_MYCTU Probable enoyl-CoA hydratase echA8 OS=Mycobacterium tuberculosis
GN=echA8 PE=1 SV=1
Length = 257
Score = 58.2 bits (139), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 85/186 (45%), Gaps = 25/186 (13%)
Query: 136 IISGVAAA--AGCQLVATCDLAIAT--TASKFSTPGYNILVSTCSDLMLSILRHPVPILA 191
II+G A A AG + DL A TA F+T G V T P +A
Sbjct: 53 IITGSAKAFAAGADIKEMADLTFADAFTADFFATWGKLAAVRT-------------PTIA 99
Query: 192 IISGVAAAAGCQLVATCDLAIATTASKFSTPGARHGIFCSTPAVA----LTRKVPLGVVR 247
++G A GC+L CD+ IA +KF P + G+ P + LTR +
Sbjct: 100 AVAGYALGGGCELAMMCDVLIAADTAKFGQPEIKLGVL---PGMGGSQRLTRAIGKAKAM 156
Query: 248 SMTITGIPISAQDAYNAGLITRVVSSNEELESETKVLTSAILENSRSVLTLGKQFLYQQM 307
+ +TG + A +A +GL++RVV ++ +L +E + + I + S S + K+ + +
Sbjct: 157 DLILTGRTMDAAEAERSGLVSRVVPAD-DLLTEARATATTISQMSASAARMAKEAVNRAF 215
Query: 308 SLNIEE 313
++ E
Sbjct: 216 ESSLSE 221
Score = 34.3 bits (77), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 20/35 (57%)
Query: 132 PILAIISGVAAAAGCQLVATCDLAIATTASKFSTP 166
P +A ++G A GC+L CD+ IA +KF P
Sbjct: 96 PTIAAVAGYALGGGCELAMMCDVLIAADTAKFGQP 130
>sp|P64017|ECHA8_MYCBO Probable enoyl-CoA hydratase echA8 OS=Mycobacterium bovis (strain
ATCC BAA-935 / AF2122/97) GN=echA8 PE=3 SV=1
Length = 257
Score = 58.2 bits (139), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 85/186 (45%), Gaps = 25/186 (13%)
Query: 136 IISGVAAA--AGCQLVATCDLAIAT--TASKFSTPGYNILVSTCSDLMLSILRHPVPILA 191
II+G A A AG + DL A TA F+T G V T P +A
Sbjct: 53 IITGSAKAFAAGADIKEMADLTFADAFTADFFATWGKLAAVRT-------------PTIA 99
Query: 192 IISGVAAAAGCQLVATCDLAIATTASKFSTPGARHGIFCSTPAVA----LTRKVPLGVVR 247
++G A GC+L CD+ IA +KF P + G+ P + LTR +
Sbjct: 100 AVAGYALGGGCELAMMCDVLIAADTAKFGQPEIKLGVL---PGMGGSQRLTRAIGKAKAM 156
Query: 248 SMTITGIPISAQDAYNAGLITRVVSSNEELESETKVLTSAILENSRSVLTLGKQFLYQQM 307
+ +TG + A +A +GL++RVV ++ +L +E + + I + S S + K+ + +
Sbjct: 157 DLILTGRTMDAAEAERSGLVSRVVPAD-DLLTEARATATTISQMSASAARMAKEAVNRAF 215
Query: 308 SLNIEE 313
++ E
Sbjct: 216 ESSLSE 221
Score = 34.3 bits (77), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 20/35 (57%)
Query: 132 PILAIISGVAAAAGCQLVATCDLAIATTASKFSTP 166
P +A ++G A GC+L CD+ IA +KF P
Sbjct: 96 PTIAAVAGYALGGGCELAMMCDVLIAADTAKFGQP 130
>sp|P14604|ECHM_RAT Enoyl-CoA hydratase, mitochondrial OS=Rattus norvegicus GN=Echs1
PE=1 SV=1
Length = 290
Score = 57.8 bits (138), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 57/121 (47%), Gaps = 2/121 (1%)
Query: 182 ILRHPVPILAIISGVAAAAGCQLVATCDLAIATTASKFSTPGARHGIFCSTPAVA-LTRK 240
I R P++A ++G A GC+L CD+ A ++F P G LTR
Sbjct: 123 ITRIKKPVIAAVNGYALGGGCELAMMCDIIYAGEKAQFGQPEILLGTIPGAGGTQRLTRA 182
Query: 241 VPLGVVRSMTITGIPISAQDAYNAGLITRVVSSNEELESETKVLTSAILENSRSVLTLGK 300
V + M +TG ISAQDA AGL++++ E L E I NS+ ++ + K
Sbjct: 183 VGKSLAMEMVLTGDRISAQDAKQAGLVSKIFPV-ETLVEEAIQCAEKIANNSKIIVAMAK 241
Query: 301 Q 301
+
Sbjct: 242 E 242
>sp|A9MR28|CAID_SALAR Carnitinyl-CoA dehydratase OS=Salmonella arizonae (strain ATCC
BAA-731 / CDC346-86 / RSK2980) GN=caiD PE=3 SV=1
Length = 261
Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 98/215 (45%), Gaps = 19/215 (8%)
Query: 109 RPKLDEIFSTCS----DLMLSILRHPVPILAIISGVAA---AAGCQLVATCDLAIATTAS 161
RPK + I + S + LS P +AII+G +AG L A + +
Sbjct: 20 RPKANAIDARTSFAMGEAFLSFRDDPHLRVAIITGAGEKFFSAGWDLKAAAE--GEAPDA 77
Query: 162 KFSTPGYNILVSTCSDLMLSILRHPVPILAIISGVAAAAGCQLVATCDLAIATTASKFST 221
F G+ L + DL P++A ++G A G +L D I + F+
Sbjct: 78 DFGPGGFAGL-TELFDLN-------KPVIAAVNGYAFGGGFELALAADFIICADHASFAL 129
Query: 222 PGARHGIFCSTPAV-ALTRKVPLGVVRSMTITGIPISAQDAYNAGLITRVVSSNEELESE 280
P A+ GI + V L + +P +V M +TG ++A++A G++ RVVS +E L+S
Sbjct: 130 PEAKLGIVPDSGGVLRLPKILPPAIVNDMVMTGRRMTAEEALRWGVVNRVVSPHELLDS- 188
Query: 281 TKVLTSAILENSRSVLTLGKQFLYQQMSLNIEEAY 315
+ L +++++ + K+ +++EE Y
Sbjct: 189 ARELARQLVQSAPLAVAALKEITRTTRDMSVEEGY 223
>sp|Q8Z9L5|CAID_SALTI Carnitinyl-CoA dehydratase OS=Salmonella typhi GN=caiD PE=3 SV=3
Length = 261
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 65/129 (50%), Gaps = 2/129 (1%)
Query: 188 PILAIISGVAAAAGCQLVATCDLAIATTASKFSTPGARHGIFCSTPAV-ALTRKVPLGVV 246
P++A ++G A G +L D + + F+ P A+ GI + V L + +P +V
Sbjct: 96 PVIAAVNGYAFGGGFELALAADFIVCAENASFALPEAKLGIVPDSGGVLRLPKLLPPAIV 155
Query: 247 RSMTITGIPISAQDAYNAGLITRVVSSNEELESETKVLTSAILENSRSVLTLGKQFLYQQ 306
M +TG +SA++A G++ RVVS +E +ES + L ++ ++ + K+
Sbjct: 156 NEMVMTGRRMSAEEALRWGIVNRVVSQSELMES-ARELAQQLVNSAPLAIAALKEIYRAT 214
Query: 307 MSLNIEEAY 315
+ +EE Y
Sbjct: 215 SEMPVEEGY 223
>sp|Q8ZRX5|CAID_SALTY Carnitinyl-CoA dehydratase OS=Salmonella typhimurium (strain LT2 /
SGSC1412 / ATCC 700720) GN=caiD PE=3 SV=3
Length = 261
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 65/129 (50%), Gaps = 2/129 (1%)
Query: 188 PILAIISGVAAAAGCQLVATCDLAIATTASKFSTPGARHGIFCSTPAV-ALTRKVPLGVV 246
P++A ++G A G +L D + + F+ P A+ GI + V L + +P +V
Sbjct: 96 PVIAAVNGYAFGGGFELALAADFIVCAENASFALPEAKLGIVPDSGGVLRLPKLLPPAIV 155
Query: 247 RSMTITGIPISAQDAYNAGLITRVVSSNEELESETKVLTSAILENSRSVLTLGKQFLYQQ 306
M +TG +SA++A G++ RVVS +E +ES + L ++ ++ + K+
Sbjct: 156 NEMVMTGRRMSAEEALRWGVVNRVVSQSELMES-ARELAQQLVNSAPLAIAALKEIYRAT 214
Query: 307 MSLNIEEAY 315
+ +EE Y
Sbjct: 215 SEMPVEEGY 223
>sp|B4TWR3|CAID_SALSV Carnitinyl-CoA dehydratase OS=Salmonella schwarzengrund (strain
CVM19633) GN=caiD PE=3 SV=1
Length = 261
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 65/129 (50%), Gaps = 2/129 (1%)
Query: 188 PILAIISGVAAAAGCQLVATCDLAIATTASKFSTPGARHGIFCSTPAV-ALTRKVPLGVV 246
P++A ++G A G +L D + + F+ P A+ GI + V L + +P +V
Sbjct: 96 PVIAAVNGYAFGGGFELALAADFIVCAENASFALPEAKLGIVPDSGGVLRLPKLLPPAIV 155
Query: 247 RSMTITGIPISAQDAYNAGLITRVVSSNEELESETKVLTSAILENSRSVLTLGKQFLYQQ 306
M +TG +SA++A G++ RVVS +E +ES + L ++ ++ + K+
Sbjct: 156 NEMVMTGRRMSAEEALRWGVVNRVVSQSELMES-ARELAQQLVNSAPLAIAALKEIYRAT 214
Query: 307 MSLNIEEAY 315
+ +EE Y
Sbjct: 215 SEMPVEEGY 223
>sp|B4TIG9|CAID_SALHS Carnitinyl-CoA dehydratase OS=Salmonella heidelberg (strain SL476)
GN=caiD PE=3 SV=1
Length = 261
Score = 57.0 bits (136), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 65/129 (50%), Gaps = 2/129 (1%)
Query: 188 PILAIISGVAAAAGCQLVATCDLAIATTASKFSTPGARHGIFCSTPAV-ALTRKVPLGVV 246
P++A ++G A G +L D + + F+ P A+ GI + V L + +P +V
Sbjct: 96 PVIAAVNGYAFGGGFELALAADFIVCAENASFALPEAKLGIVPDSGGVLRLPKLLPPAIV 155
Query: 247 RSMTITGIPISAQDAYNAGLITRVVSSNEELESETKVLTSAILENSRSVLTLGKQFLYQQ 306
M +TG +SA++A G++ RVVS +E +ES + L ++ ++ + K+
Sbjct: 156 NEMVMTGRRMSAEEALRWGVVNRVVSQSELMES-ARELAQQLVNSAPLAIAALKEIYRAT 214
Query: 307 MSLNIEEAY 315
+ +EE Y
Sbjct: 215 SEMPVEEGY 223
>sp|B4T6J5|CAID_SALNS Carnitinyl-CoA dehydratase OS=Salmonella newport (strain SL254)
GN=caiD PE=3 SV=1
Length = 261
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 65/129 (50%), Gaps = 2/129 (1%)
Query: 188 PILAIISGVAAAAGCQLVATCDLAIATTASKFSTPGARHGIFCSTPAV-ALTRKVPLGVV 246
P++A ++G A G +L D + + F+ P A+ GI + V L + +P +V
Sbjct: 96 PVIAAVNGYAFGGGFELALAADFIVCAENASFALPEAKLGIVPDSGGVLRLPKLLPPAIV 155
Query: 247 RSMTITGIPISAQDAYNAGLITRVVSSNEELESETKVLTSAILENSRSVLTLGKQFLYQQ 306
M +TG +SA++A G++ RVVS +E +ES + L ++ ++ + K+
Sbjct: 156 NEMVMTGRRMSAEEALRWGVVNRVVSQSELMES-ARELAQQLVNSAPLAIAALKEIYRAT 214
Query: 307 MSLNIEEAY 315
+ +EE Y
Sbjct: 215 SEMPVEEGY 223
>sp|P30084|ECHM_HUMAN Enoyl-CoA hydratase, mitochondrial OS=Homo sapiens GN=ECHS1 PE=1
SV=4
Length = 290
Score = 56.6 bits (135), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 60/127 (47%), Gaps = 2/127 (1%)
Query: 188 PILAIISGVAAAAGCQLVATCDLAIATTASKFSTPGARHGIFCSTPAVA-LTRKVPLGVV 246
P++A ++G A GC+L CD+ A ++F+ P G LTR V +
Sbjct: 129 PVIAAVNGYAFGGGCELAMMCDIIYAGEKAQFAQPEILIGTIPGAGGTQRLTRAVGKSLA 188
Query: 247 RSMTITGIPISAQDAYNAGLITRVVSSNEELESETKVLTSAILENSRSVLTLGKQFLYQQ 306
M +TG ISAQDA AGL++++ E L E I NS+ V+ + K+ +
Sbjct: 189 MEMVLTGDRISAQDAKQAGLVSKICPV-ETLVEEAIQCAEKIASNSKIVVAMAKESVNAA 247
Query: 307 MSLNIEE 313
+ + E
Sbjct: 248 FEMTLTE 254
>sp|B5RGA4|CAID_SALG2 Carnitinyl-CoA dehydratase OS=Salmonella gallinarum (strain 287/91
/ NCTC 13346) GN=caiD PE=3 SV=1
Length = 261
Score = 56.6 bits (135), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 95/215 (44%), Gaps = 19/215 (8%)
Query: 109 RPKLDEIFSTCS----DLMLSILRHPVPILAIISGVAA---AAGCQLVATCDLAIATTAS 161
RPK + I + S + L+ P +AII+G +AG L A + +
Sbjct: 20 RPKANAIDAKTSFAMGEAFLNFRDDPELRVAIITGGGEKFFSAGWDLKAAAE--GEAPDA 77
Query: 162 KFSTPGYNILVSTCSDLMLSILRHPVPILAIISGVAAAAGCQLVATCDLAIATTASKFST 221
F + G+ L I P++A ++G A G +L D + + F+
Sbjct: 78 DFGSGGFAGLTE--------IFDLDKPVIAAVNGYAFGGGFELALAADFIVCAENASFAL 129
Query: 222 PGARHGIFCSTPAV-ALTRKVPLGVVRSMTITGIPISAQDAYNAGLITRVVSSNEELESE 280
P A+ GI + V L + +P +V M +TG +SA++A G++ RVVS +E ++S
Sbjct: 130 PEAKLGIVPDSGGVLRLPKLLPPAIVNEMVMTGRRMSAEEALRWGVVNRVVSQSELMDS- 188
Query: 281 TKVLTSAILENSRSVLTLGKQFLYQQMSLNIEEAY 315
+ L ++ ++ + K+ + +EE Y
Sbjct: 189 ARELAQQLVNSAPLAIAALKEIYRATSEMPVEEGY 223
>sp|B5R1Q9|CAID_SALEP Carnitinyl-CoA dehydratase OS=Salmonella enteritidis PT4 (strain
P125109) GN=caiD PE=3 SV=1
Length = 261
Score = 56.6 bits (135), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 95/215 (44%), Gaps = 19/215 (8%)
Query: 109 RPKLDEIFSTCS----DLMLSILRHPVPILAIISGVAA---AAGCQLVATCDLAIATTAS 161
RPK + I + S + L+ P +AII+G +AG L A + +
Sbjct: 20 RPKANAIDAKTSFAMGEAFLNFRDDPELRVAIITGGGEKFFSAGWDLKAAAE--GEAPDA 77
Query: 162 KFSTPGYNILVSTCSDLMLSILRHPVPILAIISGVAAAAGCQLVATCDLAIATTASKFST 221
F + G+ L I P++A ++G A G +L D + + F+
Sbjct: 78 DFGSGGFAGLTE--------IFDLDKPVIAAVNGYAFGGGFELALAADFIVCAENASFAL 129
Query: 222 PGARHGIFCSTPAV-ALTRKVPLGVVRSMTITGIPISAQDAYNAGLITRVVSSNEELESE 280
P A+ GI + V L + +P +V M +TG +SA++A G++ RVVS +E ++S
Sbjct: 130 PEAKLGIVPDSGGVLRLPKLLPPAIVNEMVMTGRRMSAEEALRWGVVNRVVSQSELMDS- 188
Query: 281 TKVLTSAILENSRSVLTLGKQFLYQQMSLNIEEAY 315
+ L ++ ++ + K+ + +EE Y
Sbjct: 189 ARELAQQLVNSAPLAIAALKEIYRATSEMPVEEGY 223
>sp|P31551|CAID_ECOLI Carnitinyl-CoA dehydratase OS=Escherichia coli (strain K12) GN=caiD
PE=1 SV=4
Length = 261
Score = 55.8 bits (133), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 92/215 (42%), Gaps = 19/215 (8%)
Query: 109 RPKLDEIFSTCS----DLMLSILRHPVPILAIISGVAA---AAGCQLVATCDLAIATTAS 161
RPK + I + S ++ L+ P +AII+G +AG L A + +
Sbjct: 20 RPKANAIDAKTSFEMGEVFLNFRDDPQLRVAIITGAGEKFFSAGWDLKAAAEGE--APDA 77
Query: 162 KFSTPGYNILVSTCSDLMLSILRHPVPILAIISGVAAAAGCQLVATCDLAIATTASKFST 221
F G+ L I P++A ++G A G +L D + + F+
Sbjct: 78 DFGPGGFAGLTE--------IFNLDKPVIAAVNGYAFGGGFELALAADFIVCADNASFAL 129
Query: 222 PGARHGIFCSTPAV-ALTRKVPLGVVRSMTITGIPISAQDAYNAGLITRVVSSNEELESE 280
P A+ GI + V L + +P +V M +TG + A++A G++ RVV S EL
Sbjct: 130 PEAKLGIVPDSGGVLRLPKILPPAIVNEMVMTGRRMGAEEALRWGIVNRVV-SQAELMDN 188
Query: 281 TKVLTSAILENSRSVLTLGKQFLYQQMSLNIEEAY 315
+ L ++ ++ + K+ + +EEAY
Sbjct: 189 ARELAQQLVNSAPLAIAALKEIYRTTSEMPVEEAY 223
>sp|B1IRE0|CAID_ECOLC Carnitinyl-CoA dehydratase OS=Escherichia coli (strain ATCC 8739 /
DSM 1576 / Crooks) GN=caiD PE=3 SV=1
Length = 261
Score = 55.8 bits (133), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 92/215 (42%), Gaps = 19/215 (8%)
Query: 109 RPKLDEIFSTCS----DLMLSILRHPVPILAIISGVAA---AAGCQLVATCDLAIATTAS 161
RPK + I + S ++ L+ P +AII+G +AG L A + +
Sbjct: 20 RPKANAIDAKTSFEMGEVFLNFRDDPQLRVAIITGAGEKFFSAGWDLKAAAEGE--APDA 77
Query: 162 KFSTPGYNILVSTCSDLMLSILRHPVPILAIISGVAAAAGCQLVATCDLAIATTASKFST 221
F G+ L I P++A ++G A G +L D + + F+
Sbjct: 78 DFGPGGFAGLTE--------IFNLDKPVIAAVNGYAFGGGFELALAADFIVCADNASFAL 129
Query: 222 PGARHGIFCSTPAV-ALTRKVPLGVVRSMTITGIPISAQDAYNAGLITRVVSSNEELESE 280
P A+ GI + V L + +P +V M +TG + A++A G++ RVV S EL
Sbjct: 130 PEAKLGIVPDSGGVLRLPKILPPAIVNEMVMTGRRMGAEEALRWGIVNRVV-SQAELMDN 188
Query: 281 TKVLTSAILENSRSVLTLGKQFLYQQMSLNIEEAY 315
+ L ++ ++ + K+ + +EEAY
Sbjct: 189 ARELAQQLVNSAPLAIAALKEIYRTTSEMPVEEAY 223
>sp|B5BL54|CAID_SALPK Carnitinyl-CoA dehydratase OS=Salmonella paratyphi A (strain
AKU_12601) GN=caiD PE=3 SV=1
Length = 261
Score = 55.8 bits (133), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 65/129 (50%), Gaps = 2/129 (1%)
Query: 188 PILAIISGVAAAAGCQLVATCDLAIATTASKFSTPGARHGIFCSTPAV-ALTRKVPLGVV 246
P++A ++G A G +L D + + F+ P A+ GI + V L + +P +V
Sbjct: 96 PVIAAVNGYAFGGGFELALAADFIVCAENASFALPEAKLGIVPDSGGVLRLPKLLPPAIV 155
Query: 247 RSMTITGIPISAQDAYNAGLITRVVSSNEELESETKVLTSAILENSRSVLTLGKQFLYQQ 306
M +TG +SA++A G++ RVVS +E ++S + L ++ ++ + K+
Sbjct: 156 NEMVMTGRRMSAEEALRWGIVNRVVSQSELMDS-ARELAQQLVNSAPLAIAALKEIYRAT 214
Query: 307 MSLNIEEAY 315
+ +EE Y
Sbjct: 215 SEMPVEEGY 223
>sp|C0Q4L2|CAID_SALPC Carnitinyl-CoA dehydratase OS=Salmonella paratyphi C (strain
RKS4594) GN=caiD PE=3 SV=1
Length = 261
Score = 55.8 bits (133), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 65/129 (50%), Gaps = 2/129 (1%)
Query: 188 PILAIISGVAAAAGCQLVATCDLAIATTASKFSTPGARHGIFCSTPAV-ALTRKVPLGVV 246
P++A ++G A G +L D + + F+ P A+ GI + V L + +P +V
Sbjct: 96 PVIAAVNGYAFGGGFELALAADFIVCAENASFALPEAKLGIVPDSGGVLRLPKLLPPAIV 155
Query: 247 RSMTITGIPISAQDAYNAGLITRVVSSNEELESETKVLTSAILENSRSVLTLGKQFLYQQ 306
M +TG +SA++A G++ RVVS +E ++S + L ++ ++ + K+
Sbjct: 156 NEMVMTGRRMSAEEALRWGIVNRVVSQSELMDS-ARELAQQLVNSAPLAIAALKEIYRAT 214
Query: 307 MSLNIEEAY 315
+ +EE Y
Sbjct: 215 SEMPVEEGY 223
>sp|Q5PIL1|CAID_SALPA Carnitinyl-CoA dehydratase OS=Salmonella paratyphi A (strain ATCC
9150 / SARB42) GN=caiD PE=3 SV=1
Length = 261
Score = 55.8 bits (133), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 65/129 (50%), Gaps = 2/129 (1%)
Query: 188 PILAIISGVAAAAGCQLVATCDLAIATTASKFSTPGARHGIFCSTPAV-ALTRKVPLGVV 246
P++A ++G A G +L D + + F+ P A+ GI + V L + +P +V
Sbjct: 96 PVIAAVNGYAFGGGFELALAADFIVCAENASFALPEAKLGIVPDSGGVLRLPKLLPPAIV 155
Query: 247 RSMTITGIPISAQDAYNAGLITRVVSSNEELESETKVLTSAILENSRSVLTLGKQFLYQQ 306
M +TG +SA++A G++ RVVS +E ++S + L ++ ++ + K+
Sbjct: 156 NEMVMTGRRMSAEEALRWGIVNRVVSQSELMDS-ARELAQQLVNSAPLAIAALKEIYRAT 214
Query: 307 MSLNIEEAY 315
+ +EE Y
Sbjct: 215 SEMPVEEGY 223
>sp|Q57TJ1|CAID_SALCH Carnitinyl-CoA dehydratase OS=Salmonella choleraesuis (strain
SC-B67) GN=caiD PE=3 SV=1
Length = 261
Score = 55.8 bits (133), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 65/129 (50%), Gaps = 2/129 (1%)
Query: 188 PILAIISGVAAAAGCQLVATCDLAIATTASKFSTPGARHGIFCSTPAV-ALTRKVPLGVV 246
P++A ++G A G +L D + + F+ P A+ GI + V L + +P +V
Sbjct: 96 PVIAAVNGYAFGGGFELALAADFIVCAENASFALPEAKLGIVPDSGGVLRLPKLLPPAIV 155
Query: 247 RSMTITGIPISAQDAYNAGLITRVVSSNEELESETKVLTSAILENSRSVLTLGKQFLYQQ 306
M +TG +SA++A G++ RVVS +E ++S + L ++ ++ + K+
Sbjct: 156 NEMVMTGRRMSAEEALRWGIVNRVVSQSELMDS-ARELAQQLVNSAPLAIAALKEIYRAT 214
Query: 307 MSLNIEEAY 315
+ +EE Y
Sbjct: 215 SEMPVEEGY 223
>sp|B5F749|CAID_SALA4 Carnitinyl-CoA dehydratase OS=Salmonella agona (strain SL483)
GN=caiD PE=3 SV=1
Length = 261
Score = 55.8 bits (133), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 65/129 (50%), Gaps = 2/129 (1%)
Query: 188 PILAIISGVAAAAGCQLVATCDLAIATTASKFSTPGARHGIFCSTPAV-ALTRKVPLGVV 246
P++A ++G A G +L D + + F+ P A+ GI + V L + +P +V
Sbjct: 96 PVIAAVNGYAFGGGFELALAADFIVCAENASFALPEAKLGIVPDSGGVLRLPKLLPPAIV 155
Query: 247 RSMTITGIPISAQDAYNAGLITRVVSSNEELESETKVLTSAILENSRSVLTLGKQFLYQQ 306
M +TG +SA++A G++ RVVS +E ++S + L ++ ++ + K+
Sbjct: 156 NEMVMTGRRMSAEEALRWGIVNRVVSQSELMDS-ARELAQQLVNSAPLAIAALKEIYRAT 214
Query: 307 MSLNIEEAY 315
+ +EE Y
Sbjct: 215 SEMPVEEGY 223
>sp|B1LFW9|CAID_ECOSM Carnitinyl-CoA dehydratase OS=Escherichia coli (strain SMS-3-5 /
SECEC) GN=caiD PE=3 SV=1
Length = 261
Score = 55.5 bits (132), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 92/215 (42%), Gaps = 19/215 (8%)
Query: 109 RPKLDEIFSTCS----DLMLSILRHPVPILAIISGVAA---AAGCQLVATCDLAIATTAS 161
RPK + I + S ++ L+ P +AII+G +AG L A + +
Sbjct: 20 RPKANAIDAKTSFEMGEVFLNFRDDPQLRVAIITGAGEKFFSAGWDLKAAAEGE--APDA 77
Query: 162 KFSTPGYNILVSTCSDLMLSILRHPVPILAIISGVAAAAGCQLVATCDLAIATTASKFST 221
F G+ L I P++A ++G A G +L D + + F+
Sbjct: 78 DFGPGGFAGLTE--------IFNLDKPVIAAVNGYAFGGGFELALAADFIVCADNASFAL 129
Query: 222 PGARHGIFCSTPAV-ALTRKVPLGVVRSMTITGIPISAQDAYNAGLITRVVSSNEELESE 280
P A+ GI + V L + +P +V M +TG + A++A G++ RVV S EL
Sbjct: 130 PEAKLGIVPDSGGVLRLPKILPPAIVNEMVMTGRRMGAEEALRWGVVNRVV-SQAELMDN 188
Query: 281 TKVLTSAILENSRSVLTLGKQFLYQQMSLNIEEAY 315
+ L ++ ++ + K+ + +EEAY
Sbjct: 189 ARELAQQLVNSAPLAIAALKEIYRTTSEMPVEEAY 223
>sp|A9MYJ5|CAID_SALPB Carnitinyl-CoA dehydratase OS=Salmonella paratyphi B (strain ATCC
BAA-1250 / SPB7) GN=caiD PE=3 SV=1
Length = 261
Score = 55.5 bits (132), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 65/129 (50%), Gaps = 2/129 (1%)
Query: 188 PILAIISGVAAAAGCQLVATCDLAIATTASKFSTPGARHGIFCSTPAV-ALTRKVPLGVV 246
P++A ++G A G +L D + + F+ P A+ GI + V L + +P +V
Sbjct: 96 PVIAAVNGYAFGGGFELALAADFIVCAENASFALPEAKLGIVPDSGGVLRLPKLLPPAIV 155
Query: 247 RSMTITGIPISAQDAYNAGLITRVVSSNEELESETKVLTSAILENSRSVLTLGKQFLYQQ 306
M +TG +SA++A G++ RVVS +E ++S + L ++ ++ + K+
Sbjct: 156 NEMVMTGRRMSAEEALRWGVVNRVVSQSELMDS-ARELAQQLVNSAPLAIAALKEIYRAT 214
Query: 307 MSLNIEEAY 315
+ +EE Y
Sbjct: 215 SEMPVEEGY 223
>sp|B5FHG4|CAID_SALDC Carnitinyl-CoA dehydratase OS=Salmonella dublin (strain
CT_02021853) GN=caiD PE=3 SV=1
Length = 261
Score = 55.5 bits (132), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 65/129 (50%), Gaps = 2/129 (1%)
Query: 188 PILAIISGVAAAAGCQLVATCDLAIATTASKFSTPGARHGIFCSTPAV-ALTRKVPLGVV 246
P++A ++G A G +L D + + F+ P A+ GI + V L + +P +V
Sbjct: 96 PVIAAVNGYAFGGGFELALAADFIVCAENASFALPEAKLGIVPDSGGVLRLPKLLPPAIV 155
Query: 247 RSMTITGIPISAQDAYNAGLITRVVSSNEELESETKVLTSAILENSRSVLTLGKQFLYQQ 306
M +TG +SA++A G++ RVVS +E ++S + L ++ ++ + K+
Sbjct: 156 NEMVMTGRRMSAEEALRWGVVNRVVSQSELMDS-ARELAQQLVNSAPLAIAALKEIYRAT 214
Query: 307 MSLNIEEAY 315
+ +EE Y
Sbjct: 215 SEMPVEEGY 223
>sp|Q8FLA6|CAID_ECOL6 Carnitinyl-CoA dehydratase OS=Escherichia coli O6:H1 (strain CFT073
/ ATCC 700928 / UPEC) GN=caiD PE=3 SV=3
Length = 261
Score = 55.5 bits (132), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 92/215 (42%), Gaps = 19/215 (8%)
Query: 109 RPKLDEIFSTCS----DLMLSILRHPVPILAIISGVAA---AAGCQLVATCDLAIATTAS 161
RPK + I + S ++ L+ P +AII+G +AG L A + +
Sbjct: 20 RPKANAIDAKTSFEMGEVFLNFRDDPQLRVAIITGAGEKFFSAGWDLKAAAEGE--APDA 77
Query: 162 KFSTPGYNILVSTCSDLMLSILRHPVPILAIISGVAAAAGCQLVATCDLAIATTASKFST 221
F G+ L I P++A ++G A G +L D + + F+
Sbjct: 78 DFGPGGFAGLTE--------IFNLDKPVIAAVNGYAFGGGFELALAADFIVCADNASFAL 129
Query: 222 PGARHGIFCSTPAV-ALTRKVPLGVVRSMTITGIPISAQDAYNAGLITRVVSSNEELESE 280
P A+ GI + V L + +P +V M +TG + A++A G++ RVV S EL
Sbjct: 130 PEAKLGIVPDSGGVLRLPKILPPAIVNEMVMTGRRMGAEEALRWGVVNRVV-SQAELMDN 188
Query: 281 TKVLTSAILENSRSVLTLGKQFLYQQMSLNIEEAY 315
+ L ++ ++ + K+ + +EEAY
Sbjct: 189 ARELAQQLVNSAPLAIAALKEIYRTTSEMPVEEAY 223
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.134 0.387
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 107,192,120
Number of Sequences: 539616
Number of extensions: 4207295
Number of successful extensions: 12256
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 212
Number of HSP's successfully gapped in prelim test: 182
Number of HSP's that attempted gapping in prelim test: 11737
Number of HSP's gapped (non-prelim): 618
length of query: 315
length of database: 191,569,459
effective HSP length: 117
effective length of query: 198
effective length of database: 128,434,387
effective search space: 25430008626
effective search space used: 25430008626
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 61 (28.1 bits)