Query psy12574
Match_columns 244
No_of_seqs 228 out of 687
Neff 6.5
Searched_HMMs 13730
Date Fri Aug 16 22:50:47 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy12574.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/12574hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1gl1i_ g.4.1.1 (I:) Protease 70.9 0.42 3E-05 26.8 0.1 18 220-237 13-32 (34)
2 d1nbja_ g.3.3.2 (A:) Cycloviol 21.9 11 0.00083 20.0 0.4 12 231-242 19-30 (30)
3 d1kf6b2 d.15.4.2 (B:1-105) Fum 18.5 30 0.0022 23.9 2.3 16 220-236 54-69 (105)
4 d2ptaa_ g.3.7.2 (A:) Pandinus 18.2 15 0.0011 19.9 0.5 10 218-227 25-34 (35)
5 d1nekb2 d.15.4.2 (B:1-106) Suc 13.9 24 0.0018 24.3 0.7 16 220-236 52-67 (106)
6 d1o9aa1 g.27.1.1 (A:17-60) Fib 13.5 27 0.002 20.4 0.7 11 220-230 26-36 (44)
7 d1axha_ g.3.6.2 (A:) Atracotox 12.8 24 0.0018 19.6 0.3 9 228-236 18-26 (37)
8 d2mrba_ g.46.1.1 (A:) Metallot 8.5 53 0.0038 17.3 0.7 9 229-237 17-25 (31)
9 d2bs2b2 d.15.4.2 (B:1-106) Fum 8.3 50 0.0036 22.7 0.7 16 220-236 54-69 (106)
10 d1ansa_ g.11.1.1 (A:) Neurotox 6.8 51 0.0037 16.7 0.1 6 59-64 7-12 (27)
No 1
>d1gl1i_ g.4.1.1 (I:) Protease inhibitor PMP-C {Migratory locust (Locusta migratoria) [TaxId: 7004]}
Probab=70.91 E-value=0.42 Score=26.83 Aligned_cols=18 Identities=44% Similarity=1.195 Sum_probs=15.0
Q ss_pred ccccee--eccCCCccccee
Q psy12574 220 RQECKC--HGMSGSCTVKTC 237 (244)
Q Consensus 220 ~~~CkC--hG~SGSC~~ktC 237 (244)
--.|+| .|-|++|++|.|
T Consensus 13 cntcrc~s~gksaactlkac 32 (34)
T d1gl1i_ 13 CNTCRCGADGKSAACTLKAC 32 (34)
T ss_dssp SSEEEECTTSSCEEEECCCC
T ss_pred cceeeecCCCcccceeeccC
Confidence 346888 789999999988
No 2
>d1nbja_ g.3.3.2 (A:) Cycloviolacin O1 {Plant (Viola odorata) [TaxId: 97441]}
Probab=21.93 E-value=11 Score=19.97 Aligned_cols=12 Identities=33% Similarity=1.068 Sum_probs=10.1
Q ss_pred CcccceecccCC
Q psy12574 231 SCTVKTCWMRLP 242 (244)
Q Consensus 231 SC~~ktCw~~lp 242 (244)
||+-|.|+..+|
T Consensus 19 ~c~~kvcyn~~p 30 (30)
T d1nbja_ 19 SCSNRVCYNGIP 30 (30)
T ss_dssp EEETTEEESSCC
T ss_pred cccCceeecCCC
Confidence 677899998887
No 3
>d1kf6b2 d.15.4.2 (B:1-105) Fumarate reductase iron-sulfur protein, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=18.49 E-value=30 Score=23.85 Aligned_cols=16 Identities=31% Similarity=0.783 Sum_probs=12.4
Q ss_pred cccceeeccCCCcccce
Q psy12574 220 RQECKCHGMSGSCTVKT 236 (244)
Q Consensus 220 ~~~CkChG~SGSC~~kt 236 (244)
+..|+ +|+=|||+++.
T Consensus 54 r~sCr-~giCGsCam~I 69 (105)
T d1kf6b2 54 RWSCR-MAICGSCGMMV 69 (105)
T ss_dssp CCCCS-SSSSCCCEEEE
T ss_pred EeccC-CCCCCCCeEEE
Confidence 55565 89999999874
No 4
>d2ptaa_ g.3.7.2 (A:) Pandinus toxin {Emperor scorpion (Pandinus imperator), PITX-Ka [TaxId: 55084]}
Probab=18.16 E-value=15 Score=19.93 Aligned_cols=10 Identities=50% Similarity=1.232 Sum_probs=7.7
Q ss_pred hccccceeec
Q psy12574 218 EMRQECKCHG 227 (244)
Q Consensus 218 ~~~~~CkChG 227 (244)
-|..+|||-|
T Consensus 25 cmnrkckcfg 34 (35)
T d2ptaa_ 25 CMNRKCKCFG 34 (35)
T ss_dssp EETTEEEESC
T ss_pred Hhcccccccc
Confidence 4778888866
No 5
>d1nekb2 d.15.4.2 (B:1-106) Succinate dehydogenase iron-sulfur protein, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=13.91 E-value=24 Score=24.34 Aligned_cols=16 Identities=31% Similarity=0.746 Sum_probs=12.6
Q ss_pred cccceeeccCCCcccce
Q psy12574 220 RQECKCHGMSGSCTVKT 236 (244)
Q Consensus 220 ~~~CkChG~SGSC~~kt 236 (244)
+..|+ +|+-|||+++.
T Consensus 52 r~sCr-~giCGsCam~I 67 (106)
T d1nekb2 52 RRSCR-EGVCGSDGLNM 67 (106)
T ss_dssp CCCSS-SSCSCTTEEEE
T ss_pred EcCCC-CCCCCcceEEE
Confidence 45554 89999999986
No 6
>d1o9aa1 g.27.1.1 (A:17-60) Fibronectin {Human (Homo sapiens) [TaxId: 9606]}
Probab=13.53 E-value=27 Score=20.39 Aligned_cols=11 Identities=36% Similarity=0.640 Sum_probs=8.6
Q ss_pred cccceeeccCC
Q psy12574 220 RQECKCHGMSG 230 (244)
Q Consensus 220 ~~~CkChG~SG 230 (244)
...|.|+|.|.
T Consensus 26 ~l~CTC~Gg~~ 36 (44)
T d1o9aa1 26 ALVCTCYGGSR 36 (44)
T ss_dssp EEEEEECSSTT
T ss_pred eEEEEEccCcc
Confidence 45899999883
No 7
>d1axha_ g.3.6.2 (A:) Atracotoxin-hvI (versutoxin) {Australian funnel-web spider (Hadronyche versuta) [TaxId: 6904]}
Probab=12.76 E-value=24 Score=19.57 Aligned_cols=9 Identities=56% Similarity=0.730 Sum_probs=6.7
Q ss_pred cCCCcccce
Q psy12574 228 MSGSCTVKT 236 (244)
Q Consensus 228 ~SGSC~~kt 236 (244)
-||||+.|+
T Consensus 18 csgsct~k~ 26 (37)
T d1axha_ 18 CSQSCTFKE 26 (37)
T ss_dssp SSSCEEEEE
T ss_pred ccccceeee
Confidence 388888774
No 8
>d2mrba_ g.46.1.1 (A:) Metallothionein {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}
Probab=8.52 E-value=53 Score=17.26 Aligned_cols=9 Identities=56% Similarity=1.221 Sum_probs=6.3
Q ss_pred CCCccccee
Q psy12574 229 SGSCTVKTC 237 (244)
Q Consensus 229 SGSC~~ktC 237 (244)
-|||+.|.|
T Consensus 17 a~sctck~c 25 (31)
T d2mrba_ 17 ANSCTCKAC 25 (31)
T ss_dssp SSCCCCSSC
T ss_pred cCceeecce
Confidence 467777766
No 9
>d2bs2b2 d.15.4.2 (B:1-106) Fumarate reductase iron-sulfur protein, N-terminal domain {Wolinella succinogenes [TaxId: 844]}
Probab=8.32 E-value=50 Score=22.70 Aligned_cols=16 Identities=31% Similarity=0.762 Sum_probs=12.5
Q ss_pred cccceeeccCCCcccce
Q psy12574 220 RQECKCHGMSGSCTVKT 236 (244)
Q Consensus 220 ~~~CkChG~SGSC~~kt 236 (244)
+..|+ +|+=|||+++.
T Consensus 54 r~sCr-~giCGsCam~I 69 (106)
T d2bs2b2 54 DFVCR-AGICGSCGMMI 69 (106)
T ss_dssp CCSSS-SSSSCTTEEEE
T ss_pred EeCcC-CCCCCcceEEE
Confidence 45664 89999999875
No 10
>d1ansa_ g.11.1.1 (A:) Neurotoxin III (ATX III) {Sea anemone (Anemonia sulcata) [TaxId: 6108]}
Probab=6.75 E-value=51 Score=16.74 Aligned_cols=6 Identities=67% Similarity=2.029 Sum_probs=4.2
Q ss_pred eecCCC
Q psy12574 59 EWGGCS 64 (244)
Q Consensus 59 ~WgGCs 64 (244)
-||||-
T Consensus 7 ywggcp 12 (27)
T d1ansa_ 7 YWGGCP 12 (27)
T ss_dssp TTTTCS
T ss_pred cccCCc
Confidence 488883
Done!