RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy12580
(239 letters)
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat,
ATP-binding, cell junction, cell membrane,
integrin-binding protein, membrane, nucleotide- binding;
1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A*
Length = 271
Score = 197 bits (503), Expect = 4e-63
Identities = 81/146 (55%), Positives = 110/146 (75%), Gaps = 2/146 (1%)
Query: 93 LSRHKGISLNDLSLHTKISSGPNGDTWRGRWQKNDIVAKILAVRNCTPRVSRDFNEEFPK 152
+++H GI L+ TK++ +G+ W+GRWQ NDIV K+L VR+ + R SRDFNEE P+
Sbjct: 1 MNKHSGIDFKQLNFLTKLNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPR 60
Query: 153 LRIFSHPNVLPVIGCVNSPP--DLVVISQYMAWGSLYALLHEGAGIVVDFAQALRFAVDV 210
LRIFSHPNVLPV+G SPP +I+ +M +GSLY +LHEG VVD +QA++FA+D+
Sbjct: 61 LRIFSHPNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDM 120
Query: 211 ARGMAFLHSLERIIPQYQLNSRHVMV 236
ARGMAFLH+LE +IP++ LNSR VM+
Sbjct: 121 ARGMAFLHTLEPLIPRHALNSRSVMI 146
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2,
phosphorylation, transferase; HET: STU; 2.50A
{Arabidopsis thaliana} PDB: 3ppz_A*
Length = 309
Score = 114 bits (288), Expect = 8e-31
Identities = 44/127 (34%), Positives = 70/127 (55%), Gaps = 1/127 (0%)
Query: 99 ISLNDLSLHTKISSGPNGDTWRGRWQKNDIVAKILAVRNCTPRVSRDFNEEFPKLRIFSH 158
I DL++ KI +G G R W +D+ KIL ++ +F E ++ H
Sbjct: 34 IPWCDLNIKEKIGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRH 93
Query: 159 PNVLPVIGCVNSPPDLVVISQYMAWGSLYALLHE-GAGIVVDFAQALRFAVDVARGMAFL 217
PN++ +G V PP+L ++++Y++ GSLY LLH+ GA +D + L A DVA+GM +L
Sbjct: 94 PNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYL 153
Query: 218 HSLERII 224
H+ I
Sbjct: 154 HNRNPPI 160
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural
genomics consortium, SGC, PR kinase,
transferase-antibiotic complex; HET: STU GOL; 1.65A
{Homo sapiens}
Length = 310
Score = 107 bits (268), Expect = 7e-28
Identities = 33/125 (26%), Positives = 55/125 (44%), Gaps = 1/125 (0%)
Query: 95 RHKGISLNDLSLHTKISSGPNGDTWRGRWQKNDIVAKILAVRNCTPRVSRDFNEEFPKLR 154
H+ +DL + G G + ++ V + + R F +E +R
Sbjct: 3 PHRIFRPSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMR 62
Query: 155 IFSHPNVLPVIGCVNSPPDLVVISQYMAWGSLYALLHEGAGIVVDFAQALRFAVDVARGM 214
HPNVL IG + L I++Y+ G+L ++ ++Q + FA D+A GM
Sbjct: 63 CLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKS-MDSQYPWSQRVSFAKDIASGM 121
Query: 215 AFLHS 219
A+LHS
Sbjct: 122 AYLHS 126
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding,
nucleotide serine/threonine-protein kinase, transferase,
signaling Pro; HET: ACP; 1.80A {Dictyostelium
discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Length = 287
Score = 105 bits (265), Expect = 1e-27
Identities = 30/133 (22%), Positives = 63/133 (47%), Gaps = 10/133 (7%)
Query: 99 ISLNDLSLHTKISSGPNGDTWRGRWQKND-IVA-KILAVRNCTPRVS-----RDFNEEFP 151
++ N++ +I G G +GR K+ +VA K L + + ++F E
Sbjct: 16 LADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVF 75
Query: 152 KLRIFSHPNVLPVIGCVNSPPDLVVISQYMAWGSLYALLHEGAGIVVDFAQALRFAVDVA 211
+ +HPN++ + G +++PP +V +++ G LY L + ++ LR +D+A
Sbjct: 76 IMSNLNHPNIVKLYGLMHNPPRMV--MEFVPCGDLYHRLL-DKAHPIKWSVKLRLMLDIA 132
Query: 212 RGMAFLHSLERII 224
G+ ++ + I
Sbjct: 133 LGIEYMQNQNPPI 145
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET:
ATP; 3.46A {Homo sapiens}
Length = 319
Score = 106 bits (266), Expect = 2e-27
Identities = 34/127 (26%), Positives = 60/127 (47%), Gaps = 5/127 (3%)
Query: 99 ISLNDLSLHTKISSGPNGDTWRGRWQKNDIVA-KILAVRNCTPRVSRDFNEEFPKLRIFS 157
I L + I G G + GRW + VA +++ + + F E R
Sbjct: 30 IPFEQLEIGELIGKGRFGQVYHGRW-HGE-VAIRLIDIERDNEDQLKAFKREVMAYRQTR 87
Query: 158 HPNVLPVIGCVNSPPDLVVISQYMAWGSLYALLHEGAGIVVDFAQALRFAVDVARGMAFL 217
H NV+ +G SPP L +I+ +LY+++ A IV+D + + A ++ +GM +L
Sbjct: 88 HENVVLFMGACMSPPHLAIITSLCKGRTLYSVVR-DAKIVLDVNKTRQIAQEIVKGMGYL 146
Query: 218 HSLERII 224
H+ + I+
Sbjct: 147 HA-KGIL 152
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase,
transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A*
3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A*
3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A*
2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A*
Length = 289
Score = 105 bits (263), Expect = 2e-27
Identities = 37/122 (30%), Positives = 60/122 (49%), Gaps = 5/122 (4%)
Query: 99 ISLNDLSLHTKISSGPNGDTWRGRWQKNDIVA-KILAVRNCTPRVSRDFNEEFPKLRIFS 157
I +++ +I SG G ++G+W + VA K+L V TP+ + F E LR
Sbjct: 21 IPDGQITVGQRIGSGSFGTVYKGKW--HGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTR 78
Query: 158 HPNVLPVIGCVNSPPDLVVISQYMAWGSLYALLHEGAGIVVDFAQALRFAVDVARGMAFL 217
H N+L +G +P L +++Q+ SLY LH + + + A ARGM +L
Sbjct: 79 HVNILLFMGYSTAPQ-LAIVTQWCEGSSLYHHLHAS-ETKFEMKKLIDIARQTARGMDYL 136
Query: 218 HS 219
H+
Sbjct: 137 HA 138
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch,
ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB:
3ixe_A 2kbx_A
Length = 179
Score = 101 bits (254), Expect = 6e-27
Identities = 45/75 (60%), Positives = 56/75 (74%), Gaps = 4/75 (5%)
Query: 4 VSVTDDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLL 63
++ DDHGFSPLHWAC+EG +VE+L+ RGAR+N NRGDDTPLHLAA+HGH DIV+ L
Sbjct: 32 LNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHGHRDIVQKL 91
Query: 64 AVQNNQDLTKINFKD 78
+Q D IN +
Sbjct: 92 -LQYKAD---INAVN 102
Score = 95.6 bits (239), Expect = 7e-25
Identities = 24/80 (30%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Query: 4 VSVTDDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLL 63
++ ++HG PLH+AC G ++ E L+ GA V+ N+ + P+ A A +
Sbjct: 98 INAVNEHGNVPLHYACFWGQDQVAEDLVANGALVSICNKYGEMPVDKAKAPLRELLRERA 157
Query: 64 AVQNNQDLTKINFKDQSWLG 83
+ Q+L +I +KD W G
Sbjct: 158 -EKMGQNLNRIPYKDTFWKG 176
Score = 78.6 bits (195), Expect = 2e-18
Identities = 14/57 (24%), Positives = 22/57 (38%), Gaps = 1/57 (1%)
Query: 8 DDHGFSPLHWACKEGHLKLVELLLQRGAR-VNATNRGDDTPLHLAAAHGHLDIVRLL 63
+ C+EG+ V L L +N + +PLH A G +V +L
Sbjct: 2 SPEFMDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEML 58
Score = 58.6 bits (143), Expect = 5e-11
Identities = 11/54 (20%), Positives = 17/54 (31%), Gaps = 6/54 (11%)
Query: 4 VSVTDDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHL 57
VS+ + +G P+ A L E + G +N P G
Sbjct: 131 VSICNKYGEMPVDKAKAPLRELLRERAEKMGQNLNRI------PYKDTFWKGTT 178
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain,
alternative splicing, ATP-binding, disease MU kinase,
metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Length = 307
Score = 104 bits (261), Expect = 6e-27
Identities = 39/122 (31%), Positives = 60/122 (49%), Gaps = 5/122 (4%)
Query: 99 ISLNDLSLHTKISSGPNGDTWRGRWQKNDIVA-KILAVRNCTPRVSRDFNEEFPKLRIFS 157
I +++ L T+I SG G ++G+W + VA KIL V + TP + F E LR
Sbjct: 33 IEASEVMLSTRIGSGSFGTVYKGKW--HGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTR 90
Query: 158 HPNVLPVIGCVNSPPDLVVISQYMAWGSLYALLHEGAGIVVDFAQALRFAVDVARGMAFL 217
H N+L +G + L +++Q+ SLY LH Q + A A+GM +L
Sbjct: 91 HVNILLFMGYMTKDN-LAIVTQWCEGSSLYKHLHVQ-ETKFQMFQLIDIARQTAQGMDYL 148
Query: 218 HS 219
H+
Sbjct: 149 HA 150
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage
kinase, MLK family, MLK1 and MLK3 subtype selective
inhibitors; HET: VIN; 2.60A {Homo sapiens}
Length = 271
Score = 101 bits (253), Expect = 5e-26
Identities = 31/124 (25%), Positives = 52/124 (41%), Gaps = 7/124 (5%)
Query: 99 ISLNDLSLHTKISSGPNGDTWRGRWQKNDIVA-KIL--AVRNCTPRVSRDFNEEFPKLRI 155
I +L+L I G G +R W D VA K + + +E +
Sbjct: 4 IDFAELTLEEIIGIGGFGKVYRAFW-IGDEVAVKAARHDPDEDISQTIENVRQEAKLFAM 62
Query: 156 FSHPNVLPVIGCVNSPPDLVVISQYMAWGSLYALLHEGAGIVVDFAQALRFAVDVARGMA 215
HPN++ + G P+L ++ ++ G L +L G + + +AV +ARGM
Sbjct: 63 LKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLS---GKRIPPDILVNWAVQIARGMN 119
Query: 216 FLHS 219
+LH
Sbjct: 120 YLHD 123
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase
activator complex; HET: ADN; 2.00A {Homo sapiens}
Length = 307
Score = 100 bits (252), Expect = 1e-25
Identities = 28/124 (22%), Positives = 59/124 (47%), Gaps = 7/124 (5%)
Query: 99 ISLNDLSLHTKISSGPNGDTWRGRWQKNDIVAKILAVRNCTPRVSRDFNEEFPKLRIFSH 158
I ++ + + G G + +W+ D+ K + + + F E +L +H
Sbjct: 5 IDYKEIEVEEVVGRGAFGVVCKAKWRAKDVAIKQIE----SESERKAFIVELRQLSRVNH 60
Query: 159 PNVLPVIGCVNSPPDLVVISQYMAWGSLYALLH-EGAGIVVDFAQALRFAVDVARGMAFL 217
PN++ + G +P + ++ +Y GSLY +LH A A+ + + ++G+A+L
Sbjct: 61 PNIVKLYGACLNP--VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYL 118
Query: 218 HSLE 221
HS++
Sbjct: 119 HSMQ 122
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat,
helix, extended loop, four repeat, PR ANK repeat,
disease mutation, metal-binding; 2.00A {Homo sapiens}
SCOP: k.37.1.1
Length = 137
Score = 90.9 bits (227), Expect = 2e-23
Identities = 35/60 (58%), Positives = 44/60 (73%)
Query: 4 VSVTDDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLL 63
+V D G++PLH AC GHLK+VELLLQ A VN T +D+PLH AA +GH+DIV+LL
Sbjct: 36 PNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNTTGYQNDSPLHDAAKNGHVDIVKLL 95
Score = 89.4 bits (223), Expect = 8e-23
Identities = 25/57 (43%), Positives = 32/57 (56%)
Query: 7 TDDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLL 63
T+ G + LH A +G + VE LLQ G+ N + TPLH A HGHL +V LL
Sbjct: 6 TNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELL 62
Score = 84.0 bits (209), Expect = 8e-21
Identities = 21/60 (35%), Positives = 28/60 (46%)
Query: 4 VSVTDDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLL 63
V+ T SPLH A K GH+ +V+LLL GA NA N P+ ++ L
Sbjct: 69 VNTTGYQNDSPLHDAAKNGHVDIVKLLLSYGASRNAVNIFGLRPVDYTDDESMKSLLLLP 128
Score = 46.3 bits (111), Expect = 7e-07
Identities = 10/30 (33%), Positives = 15/30 (50%), Gaps = 1/30 (3%)
Query: 34 GARVNATNRGDDTPLHLAAAHGHLDIVRLL 63
G +RG+ T LH+A+ G + V L
Sbjct: 1 GIDPFTNHRGE-TLLHIASIKGDIPSVEYL 29
Score = 45.1 bits (108), Expect = 2e-06
Identities = 6/37 (16%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
Query: 4 VSVTDDHGFSPLHWACKEGHLKLVELLLQRGARVNAT 40
+ + G P+ + E L+ L + + +A+
Sbjct: 102 RNAVNIFGLRPVDYTDDESMKSLLLLPEKNES-SSAS 137
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC,
rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens}
PDB: 3uxg_A
Length = 172
Score = 90.6 bits (226), Expect = 6e-23
Identities = 23/60 (38%), Positives = 35/60 (58%)
Query: 4 VSVTDDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLL 63
V+ D+ GF+PL WA G ++ V LL+ GA + + ++ L LA+ G+ DIV LL
Sbjct: 29 VNKPDERGFTPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLASTGGYTDIVGLL 88
Score = 89.8 bits (224), Expect = 1e-22
Identities = 20/60 (33%), Positives = 35/60 (58%)
Query: 4 VSVTDDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLL 63
+++ D +G +PL +A + H+K VE LL RGA + TP+ LA A G+ + +++
Sbjct: 95 INIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTTEADSGYTPMDLAVALGYRKVQQVI 154
Score = 86.3 bits (215), Expect = 2e-21
Identities = 17/60 (28%), Positives = 24/60 (40%)
Query: 4 VSVTDDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLL 63
+ S L A G+ +V LLL+R +N + TPL A H+ V L
Sbjct: 62 PHILAKERESALSLASTGGYTDIVGLLLERDVDINIYDWNGGTPLLYAVRGNHVKCVEAL 121
Score = 79.0 bits (196), Expect = 1e-18
Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Query: 11 GFSPLHWACKEGHLKLVELLLQRGA-RVNATNRGDDTPLHLAAAHGHLDIVRLL 63
+H +G L ++ L++G VN + TPL A+A G ++ VR L
Sbjct: 2 DSLSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFL 55
Score = 59.7 bits (146), Expect = 2e-11
Identities = 8/44 (18%), Positives = 21/44 (47%)
Query: 4 VSVTDDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTP 47
++ D G++P+ A G+ K+ +++ ++ +N P
Sbjct: 128 LTTEADSGYTPMDLAVALGYRKVQQVIENHILKLFQSNLVPADP 171
Score = 43.9 bits (105), Expect = 7e-06
Identities = 10/37 (27%), Positives = 18/37 (48%), Gaps = 3/37 (8%)
Query: 43 GDDTPLHLAAAHGHLDIVRLLAVQNNQDLTKINFKDQ 79
GD +H AA G LD ++ ++ + +N D+
Sbjct: 1 GDSLSIHQLAAQGELDQLKEH-LRKGDN--LVNKPDE 34
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC,
protein kinase, transfe; HET: LDN FLC; 1.82A {Homo
sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Length = 301
Score = 93.2 bits (232), Expect = 8e-23
Identities = 36/122 (29%), Positives = 53/122 (43%), Gaps = 12/122 (9%)
Query: 103 DLSLHTKISSGPNGDTWRGRWQKNDIVAKILAVRNCTPRVSRDFNE-EFPKLRIFSHPNV 161
D++L + G G+ WRG WQ ++ KI + R+ F E E + H N+
Sbjct: 9 DITLLECVGKGRYGEVWRGSWQGENVAVKIFSSRD----EKSWFRETELYNTVMLRHENI 64
Query: 162 LPVIGCV----NSPPDLVVISQYMAWGSLYALLHEGAGIVVDFAQALRFAVDVARGMAFL 217
L I +S L +I+ Y GSLY L +D LR + +A G+A L
Sbjct: 65 LGFIASDMTSRHSSTQLWLITHYHEMGSLYDYLQLT---TLDTVSCLRIVLSIASGLAHL 121
Query: 218 HS 219
H
Sbjct: 122 HI 123
>3v31_A Ankyrin repeat family A protein 2; structural genomics
consortium, SGC, ankra2, ANK repeat, Pro binding,
HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Length = 167
Score = 89.8 bits (224), Expect = 1e-22
Identities = 25/60 (41%), Positives = 38/60 (63%)
Query: 4 VSVTDDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLL 63
++ TD+ GF+PL WA G + +VE LLQ GA +G ++ L LA + G+ DIV++L
Sbjct: 29 INHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGYTDIVKML 88
Score = 87.8 bits (219), Expect = 5e-22
Identities = 17/60 (28%), Positives = 31/60 (51%)
Query: 4 VSVTDDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLL 63
V+ D +G +PL +A H+K V++LL+ GA + LA A G+ + +++
Sbjct: 95 VNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIETDSGYNSMDLAVALGYRSVQQVI 154
Score = 86.7 bits (216), Expect = 2e-21
Identities = 18/60 (30%), Positives = 28/60 (46%)
Query: 4 VSVTDDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLL 63
+ S L AC +G+ +V++LL G VN + TPL A H+ V++L
Sbjct: 62 PQLLGKGRESALSLACSKGYTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKML 121
Score = 83.6 bits (208), Expect = 3e-20
Identities = 14/54 (25%), Positives = 25/54 (46%)
Query: 10 HGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLL 63
+H +G + + +++ +N T+ TPL AAAHG + +V L
Sbjct: 2 ANSLSVHQLAAQGEMLYLATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFL 55
Score = 53.5 bits (130), Expect = 3e-09
Identities = 4/39 (10%), Positives = 17/39 (43%)
Query: 4 VSVTDDHGFSPLHWACKEGHLKLVELLLQRGARVNATNR 42
++ D G++ + A G+ + +++ ++ +
Sbjct: 128 PTIETDSGYNSMDLAVALGYRSVQQVIESHLLKLLQNIK 166
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP:
k.37.1.1
Length = 93
Score = 86.6 bits (216), Expect = 2e-22
Identities = 32/60 (53%), Positives = 46/60 (76%)
Query: 4 VSVTDDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLL 63
V+ D +G +PLH A + GHL++V+LLL+ GA VNA ++ TPLHLAA +GHL++V+LL
Sbjct: 28 VNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLL 87
Score = 83.6 bits (208), Expect = 3e-21
Identities = 30/54 (55%), Positives = 43/54 (79%)
Query: 10 HGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLL 63
+G +PLH A + GHL++V+LLL+ GA VNA ++ TPLHLAA +GHL++V+LL
Sbjct: 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLL 54
Score = 46.2 bits (111), Expect = 3e-07
Identities = 16/32 (50%), Positives = 24/32 (75%)
Query: 4 VSVTDDHGFSPLHWACKEGHLKLVELLLQRGA 35
V+ D +G +PLH A + GHL++V+LLL+ GA
Sbjct: 61 VNAKDKNGRTPLHLAARNGHLEVVKLLLEAGA 92
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline,
aortic aneurysm, ATP-binding, craniosynostosis, disease
mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens}
PDB: 1vjy_A* 3gxl_A* 3hmm_A* 2wot_A* 2wou_A* 1py5_A*
1rw8_A*
Length = 303
Score = 91.7 bits (228), Expect = 3e-22
Identities = 33/122 (27%), Positives = 51/122 (41%), Gaps = 12/122 (9%)
Query: 103 DLSLHTKISSGPNGDTWRGRWQKNDIVAKILAVRNCTPRVSRDFNE-EFPKLRIFSHPNV 161
+ L I G G+ WRG+W+ ++ KI + R F E E + + H N+
Sbjct: 4 TIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSRE----ERSWFREAEIYQTVMLRHENI 59
Query: 162 LPVIGCVNSP----PDLVVISQYMAWGSLYALLHEGAGIVVDFAQALRFAVDVARGMAFL 217
L I N L ++S Y GSL+ L+ V ++ A+ A G+A L
Sbjct: 60 LGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRY---TVTVEGMIKLALSTASGLAHL 116
Query: 218 HS 219
H
Sbjct: 117 HM 118
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END
capping, inhibition, prote binding, actin capping,
actin-binding, cytoskeleton, ANK RE; 2.20A {Homo
sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Length = 123
Score = 87.1 bits (217), Expect = 3e-22
Identities = 25/60 (41%), Positives = 37/60 (61%)
Query: 4 VSVTDDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLL 63
V+ T + G PLH+A G L+++E LL +GA +NA ++ TPL A GH+ V+LL
Sbjct: 33 VNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVYEGHVSCVKLL 92
Score = 83.2 bits (207), Expect = 1e-20
Identities = 20/54 (37%), Positives = 25/54 (46%)
Query: 10 HGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLL 63
WA K G L V+ + +G VN T G PLH AA G L+I+ L
Sbjct: 6 MCDKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFL 59
Score = 79.4 bits (197), Expect = 3e-19
Identities = 15/58 (25%), Positives = 24/58 (41%)
Query: 4 VSVTDDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVR 61
++ D H +PL A EGH+ V+LLL +GA T +++
Sbjct: 66 INAPDKHHITPLLSAVYEGHVSCVKLLLSKGADKTVKGPDGLTAFEATDNQAIKALLQ 123
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein
kinase), receptor serine/threonine kinase; 2.60A {Homo
sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A*
3kcf_A*
Length = 342
Score = 92.1 bits (229), Expect = 4e-22
Identities = 32/126 (25%), Positives = 51/126 (40%), Gaps = 12/126 (9%)
Query: 99 ISLNDLSLHTKISSGPNGDTWRGRWQKNDIVAKILAVRNCTPRVSRDFNE-EFPKLRIFS 157
+ L I G G+ WRG+W+ ++ KI + R F E E + +
Sbjct: 39 TIARTIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSRE----ERSWFREAEIYQTVMLR 94
Query: 158 HPNVLPVIGCV----NSPPDLVVISQYMAWGSLYALLHEGAGIVVDFAQALRFAVDVARG 213
H N+L I + L ++S Y GSL+ L+ V ++ A+ A G
Sbjct: 95 HENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRY---TVTVEGMIKLALSTASG 151
Query: 214 MAFLHS 219
+A LH
Sbjct: 152 LAHLHM 157
>3mdy_A Bone morphogenetic protein receptor type-1B; complex
(isomerase-protein kinase), receptor serine/threonin
structural genomics consortium, SGC; HET: LDN; 2.05A
{Homo sapiens}
Length = 337
Score = 91.7 bits (228), Expect = 5e-22
Identities = 28/126 (22%), Positives = 46/126 (36%), Gaps = 12/126 (9%)
Query: 99 ISLNDLSLHTKISSGPNGDTWRGRWQKNDIVAKILAVRNCTPRVSRDFNE-EFPKLRIFS 157
+ + +I G G+ W G+W+ + K+ + F E E + +
Sbjct: 34 TIAKQIQMVKQIGKGRYGEVWMGKWRGEKVAVKVFFTTE----EASWFRETEIYQTVLMR 89
Query: 158 HPNVLPVIGCVNSP----PDLVVISQYMAWGSLYALLHEGAGIVVDFAQALRFAVDVARG 213
H N+L I L +I+ Y GSLY L +D L+ A G
Sbjct: 90 HENILGFIAADIKGTGSWTQLYLITDYHENGSLYDYLKST---TLDAKSMLKLAYSSVSG 146
Query: 214 MAFLHS 219
+ LH+
Sbjct: 147 LCHLHT 152
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase,
cyclin dependent kinase inhibitory protein, CDK, cell
cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A
1dc2_A 2a5e_A
Length = 156
Score = 86.8 bits (216), Expect = 1e-21
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Query: 4 VSVTDDHGF-SPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRL 62
+ D P+H A +EG L + +L + GAR++ + P+ LA GH D+ R
Sbjct: 70 PNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARY 129
Query: 63 L 63
L
Sbjct: 130 L 130
Score = 82.5 bits (205), Expect = 4e-20
Identities = 15/58 (25%), Positives = 23/58 (39%), Gaps = 1/58 (1%)
Query: 6 VTDDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLL 63
+ + L A G ++ V LL+ GA NA N P+ + G + LL
Sbjct: 7 SSMEPSADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQV-MMMGSARVAELL 63
Score = 80.6 bits (200), Expect = 3e-19
Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
Query: 4 VSVTDDHGFSPLHWACKEGHLKLVELLLQRGARVNATNR-GDDTPLHLAAAHGHLDIVRL 62
+ + +G P+ G ++ ELLL GA N + P+H AA G LD + +
Sbjct: 38 PNAPNSYGRRPIQVMMM-GSARVAELLLLHGAEPNCADPATLTRPVHDAAREGFLDTLVV 96
Query: 63 L 63
L
Sbjct: 97 L 97
Score = 74.8 bits (185), Expect = 4e-17
Identities = 13/57 (22%), Positives = 19/57 (33%), Gaps = 5/57 (8%)
Query: 4 VSVTDDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIV 60
+ V D G P+ A + GH + L + + AA G DI
Sbjct: 104 LDVRDAWGRLPVDLAEELGHRDVARYLRAAAGGTRGS-----NHARIDAAEGPSDIP 155
Score = 45.5 bits (109), Expect = 2e-06
Identities = 9/33 (27%), Positives = 15/33 (45%), Gaps = 2/33 (6%)
Query: 31 LQRGARVNATNRGDDTPLHLAAAHGHLDIVRLL 63
++ A ++ L AAA G ++ VR L
Sbjct: 1 MEPAA--GSSMEPSADWLATAAARGRVEEVRAL 31
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV;
NMR {Escherichia coli}
Length = 115
Score = 85.1 bits (212), Expect = 1e-21
Identities = 29/60 (48%), Positives = 41/60 (68%)
Query: 4 VSVTDDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLL 63
V+ G +PLH A K GH ++V+LLL +GA VNA ++ +TP HLA +GH +IV+LL
Sbjct: 35 VNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARSKDGNTPEHLAKKNGHHEIVKLL 94
Score = 83.2 bits (207), Expect = 1e-20
Identities = 29/56 (51%), Positives = 39/56 (69%)
Query: 8 DDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLL 63
G +PLH A K GH + V+ LL +GA VNA ++ +TPLHLAA +GH +IV+LL
Sbjct: 6 SKDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLL 61
Score = 59.7 bits (146), Expect = 6e-12
Identities = 18/46 (39%), Positives = 25/46 (54%)
Query: 4 VSVTDDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLH 49
V+ G +P H A K GH ++V+LL +GA VNA + G H
Sbjct: 68 VNARSKDGNTPEHLAKKNGHHEIVKLLDAKGADVNARSWGSSHHHH 113
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP:
k.37.1.1
Length = 126
Score = 85.5 bits (213), Expect = 2e-21
Identities = 32/60 (53%), Positives = 46/60 (76%)
Query: 4 VSVTDDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLL 63
V+ D +G +PLH A + GHL++V+LLL+ GA VNA ++ TPLHLAA +GHL++V+LL
Sbjct: 61 VNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLL 120
Score = 84.7 bits (211), Expect = 3e-21
Identities = 32/60 (53%), Positives = 46/60 (76%)
Query: 4 VSVTDDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLL 63
V+ D +G +PLH A + GHL++V+LLL+ GA VNA ++ TPLHLAA +GHL++V+LL
Sbjct: 28 VNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLL 87
Score = 83.2 bits (207), Expect = 1e-20
Identities = 30/54 (55%), Positives = 43/54 (79%)
Query: 10 HGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLL 63
+G +PLH A + GHL++V+LLL+ GA VNA ++ TPLHLAA +GHL++V+LL
Sbjct: 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLL 54
Score = 45.8 bits (110), Expect = 9e-07
Identities = 15/28 (53%), Positives = 22/28 (78%)
Query: 8 DDHGFSPLHWACKEGHLKLVELLLQRGA 35
D +G +PLH A + GHL++V+LLL+ GA
Sbjct: 98 DKNGRTPLHLAARNGHLEVVKLLLEAGA 125
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin
repeat, signaling protein; NMR {Mus musculus} SCOP:
i.11.1.1
Length = 136
Score = 85.6 bits (213), Expect = 2e-21
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Query: 4 VSVTDDHGF-SPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRL 62
+ D P+H A +EG L + +L + GAR++ + P+ LA GH DI R
Sbjct: 70 PNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVCDAWGRLPVDLAEEQGHRDIARY 129
Query: 63 L 63
L
Sbjct: 130 L 130
Score = 83.3 bits (207), Expect = 1e-20
Identities = 16/60 (26%), Positives = 25/60 (41%), Gaps = 1/60 (1%)
Query: 4 VSVTDDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLL 63
+ + + L A G ++ V LL+ GA NA NR P+ + G + LL
Sbjct: 5 IHMLGGSSDAGLATAAARGQVETVRQLLEAGADPNALNRFGRRPIQV-MMMGSAQVAELL 63
Score = 79.8 bits (198), Expect = 3e-19
Identities = 18/61 (29%), Positives = 26/61 (42%), Gaps = 2/61 (3%)
Query: 4 VSVTDDHGFSPLHWACKEGHLKLVELLLQRGARVNA-TNRGDDTPLHLAAAHGHLDIVRL 62
+ + G P+ G ++ ELLL GA N P+H AA G LD + +
Sbjct: 38 PNALNRFGRRPIQVMMM-GSAQVAELLLLHGAEPNCADPATLTRPVHDAAREGFLDTLVV 96
Query: 63 L 63
L
Sbjct: 97 L 97
Score = 49.7 bits (120), Expect = 4e-08
Identities = 9/30 (30%), Positives = 13/30 (43%)
Query: 34 GARVNATNRGDDTPLHLAAAHGHLDIVRLL 63
++ D L AAA G ++ VR L
Sbjct: 2 SPGIHMLGGSSDAGLATAAARGQVETVRQL 31
Score = 48.6 bits (117), Expect = 9e-08
Identities = 8/32 (25%), Positives = 13/32 (40%)
Query: 4 VSVTDDHGFSPLHWACKEGHLKLVELLLQRGA 35
+ V D G P+ A ++GH + L
Sbjct: 104 LDVCDAWGRLPVDLAEEQGHRDIARYLHAATG 135
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein;
2.70A {Homo sapiens} SCOP: d.211.1.1
Length = 437
Score = 90.6 bits (226), Expect = 3e-21
Identities = 32/76 (42%), Positives = 41/76 (53%), Gaps = 4/76 (5%)
Query: 4 VSVTDDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLL 63
V T G++PLH A G++KLV+ LLQ A VNA + +PLH AA GH DIV LL
Sbjct: 304 VDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLL 363
Query: 64 AVQNNQDLTKINFKDQ 79
++N N
Sbjct: 364 -LKNGAS---PNEVSS 375
Score = 88.7 bits (221), Expect = 1e-20
Identities = 24/60 (40%), Positives = 34/60 (56%)
Query: 4 VSVTDDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLL 63
+G++PLH A K+ +++ LLQ G NA + TPLHLAA GH ++V LL
Sbjct: 205 PHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMVALL 264
Score = 88.7 bits (221), Expect = 1e-20
Identities = 28/60 (46%), Positives = 38/60 (63%)
Query: 4 VSVTDDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLL 63
+ GF+PLH A K G +++ ELLL+R A NA + TPLH+A H +LDIV+LL
Sbjct: 139 QACMTKKGFTPLHVAAKYGKVRVAELLLERDAHPNAAGKNGLTPLHVAVHHNNLDIVKLL 198
Score = 87.9 bits (219), Expect = 2e-20
Identities = 30/78 (38%), Positives = 43/78 (55%), Gaps = 4/78 (5%)
Query: 4 VSVTDDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLL 63
+ G +PLH A GHL +V+ LLQRGA N +N +TPLH+AA GH ++ + L
Sbjct: 7 GGGGGESGLTPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYL 66
Query: 64 AVQNNQDLTKINFKDQSW 81
+QN +N K +
Sbjct: 67 -LQNKAK---VNAKAKDD 80
Score = 86.8 bits (216), Expect = 5e-20
Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 4 VSVTDDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLL 63
V+ G+SPLH A ++GH +V LLL+ GA N + TPL +A G++ + +L
Sbjct: 337 VNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSDGTTPLAIAKRLGYISVTDVL 396
Query: 64 AVQNNQDLTKINFKD 78
V ++ + + D
Sbjct: 397 KVVTDET-SFVLVSD 410
Score = 86.4 bits (215), Expect = 7e-20
Identities = 21/60 (35%), Positives = 34/60 (56%)
Query: 4 VSVTDDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLL 63
++ G +PLH A +EGH++ V LL++ A + TPLH+AA +G + + LL
Sbjct: 106 PNLATTAGHTPLHIAAREGHVETVLALLEKEASQACMTKKGFTPLHVAAKYGKVRVAELL 165
Score = 86.4 bits (215), Expect = 7e-20
Identities = 24/60 (40%), Positives = 34/60 (56%)
Query: 4 VSVTDDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLL 63
+ G +PLH A +EGH ++V LLL + A N N+ TPLHL A GH+ + +L
Sbjct: 238 ANAESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVL 297
Score = 86.4 bits (215), Expect = 7e-20
Identities = 20/60 (33%), Positives = 32/60 (53%)
Query: 4 VSVTDDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLL 63
+ +G +PLH A +L +V+LLL RG ++ TPLH+AA +++ R L
Sbjct: 172 PNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSL 231
Score = 86.0 bits (214), Expect = 1e-19
Identities = 26/60 (43%), Positives = 39/60 (65%)
Query: 4 VSVTDDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLL 63
+V++ +PLH A + GH ++ + LLQ A+VNA + D TPLH AA GH ++V+LL
Sbjct: 40 PNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNAKAKDDQTPLHCAARIGHTNMVKLL 99
Score = 85.6 bits (213), Expect = 1e-19
Identities = 23/60 (38%), Positives = 32/60 (53%)
Query: 4 VSVTDDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLL 63
V+ +PLH A + GH +V+LLL+ A N TPLH+AA GH++ V L
Sbjct: 73 VNAKAKDDQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLAL 132
Score = 85.2 bits (212), Expect = 2e-19
Identities = 25/75 (33%), Positives = 47/75 (62%), Gaps = 4/75 (5%)
Query: 4 VSVTDDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLL 63
++ + G +PLH +EGH+ + ++L++ G V+AT R TPLH+A+ +G++ +V+ L
Sbjct: 271 GNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTRMGYTPLHVASHYGNIKLVKFL 330
Query: 64 AVQNNQDLTKINFKD 78
+Q+ D +N K
Sbjct: 331 -LQHQAD---VNAKT 341
Score = 50.2 bits (121), Expect = 2e-07
Identities = 14/50 (28%), Positives = 19/50 (38%), Gaps = 4/50 (8%)
Query: 33 RGARVNATNRGDDTPLHLAAAHGHLDIVRLLAVQNNQDLTKINFKDQSWL 82
G TPLH+A+ GHL IV+ L +Q N +
Sbjct: 3 PGISGGGGGESGLTPLHVASFMGHLPIVKNL-LQRGAS---PNVSNVKVE 48
Score = 47.9 bits (115), Expect = 9e-07
Identities = 9/59 (15%), Positives = 23/59 (38%), Gaps = 5/59 (8%)
Query: 4 VSVTDDHGFSPLHWACKEGHLKLVELL---LQRGARVNATNRGDDTPLHLAAAHGHLDI 59
+ G +PL A + G++ + ++L + V +++ + LD+
Sbjct: 370 PNEVSSDGTTPLAIAKRLGYISVTDVLKVVTDETSFVLVSDKHRMSFPE--TVDEILDV 426
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix,
SH3, ankyrin repeat, signaling protein, ANK repeat,
cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB:
3ehq_A
Length = 222
Score = 87.3 bits (217), Expect = 3e-21
Identities = 27/61 (44%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 4 VSVTDDHGFSPLHWACKEGHLKLVELLL-QRGARVNATNRGDDTPLHLAAAHGHLDIVRL 62
V+ D G + L+WAC GH +VE+L Q +N N+ DT LH AA G+ DIV+L
Sbjct: 99 VNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDTALHAAAWKGYADIVQL 158
Query: 63 L 63
L
Sbjct: 159 L 159
Score = 86.9 bits (216), Expect = 4e-21
Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Query: 3 YVSVTDDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRL 62
YV+ + +PLH A K G+L + L VN ++ T L+ A GH DIV +
Sbjct: 65 YVAEQAESIDNPLHEAAKRGNLSWLRECLDNRVGVNGLDKAGSTALYWACHGGHKDIVEM 124
Query: 63 LAVQNNQDLTKINFKD 78
L Q N + +N ++
Sbjct: 125 LFTQPNIE---LNQQN 137
Score = 84.6 bits (210), Expect = 3e-20
Identities = 16/71 (22%), Positives = 32/71 (45%), Gaps = 4/71 (5%)
Query: 4 VSVTDDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLL 63
++ + G + LH A +G+ +V+LLL +GAR + N +A +++
Sbjct: 133 LNQQNKLGDTALHAAAWKGYADIVQLLLAKGARTDLRNIEKKLAFDMATNAACASLLKKK 192
Query: 64 ----AVQNNQD 70
AV+ +
Sbjct: 193 QGTDAVRTLSN 203
Score = 71.1 bits (175), Expect = 3e-15
Identities = 6/55 (10%), Positives = 12/55 (21%)
Query: 4 VSVTDDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLD 58
+ + A L++ A +N D + H
Sbjct: 166 TDLRNIEKKLAFDMATNAACASLLKKKQGTDAVRTLSNAEDYLDDEDSDLEHHHH 220
Score = 65.3 bits (160), Expect = 4e-13
Identities = 13/60 (21%), Positives = 19/60 (31%), Gaps = 5/60 (8%)
Query: 4 VSVTDDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLL 63
+ D + +G L+ V D PLH AA G+L +R
Sbjct: 38 IIYITDMSDTNWWKGTSKGRTGLIP-----SNYVAEQAESIDNPLHEAAKRGNLSWLREC 92
Score = 63.4 bits (155), Expect = 2e-12
Identities = 7/62 (11%), Positives = 14/62 (22%)
Query: 7 TDDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLLAVQ 66
G + A + + L + DT + G ++ V
Sbjct: 8 PVKPGQVKVFRALYTFEPRTPDELYIEEGDIIYITDMSDTNWWKGTSKGRTGLIPSNYVA 67
Query: 67 NN 68
Sbjct: 68 EQ 69
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats,
methyllyine binding, huntingti interacting protein 14,
acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo
sapiens}
Length = 240
Score = 87.5 bits (218), Expect = 3e-21
Identities = 14/61 (22%), Positives = 30/61 (49%)
Query: 3 YVSVTDDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRL 62
+++ DD+ + A + G + L++ G V ++ + T LH AA + +D+V+
Sbjct: 1 HMTHIDDYSTWDIVKATQYGIYERCRELVEAGYDVRQPDKENVTLLHWAAINNRIDLVKY 60
Query: 63 L 63
Sbjct: 61 Y 61
Score = 83.6 bits (208), Expect = 9e-20
Identities = 18/57 (31%), Positives = 30/57 (52%)
Query: 7 TDDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLL 63
H + LHWA G+ ++ LLL+ GA V+A N ++ L LA ++ ++ L
Sbjct: 173 DKYHKNTALHWAVLAGNTTVISLLLEAGANVDAQNIKGESALDLAKQRKNVWMINHL 229
Score = 83.3 bits (207), Expect = 1e-19
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 4/71 (5%)
Query: 8 DDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLLAVQN 67
D +PLHWA ++GHL +V L++ GA + + + +HLAA GH IV L +
Sbjct: 73 GDLNSTPLHWATRQGHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYL-IAK 131
Query: 68 NQDLTKINFKD 78
QD ++ D
Sbjct: 132 GQD---VDMMD 139
Score = 82.1 bits (204), Expect = 4e-19
Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 4 VSVTDDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGH-LDIVRL 62
S+ D G S +H A + GH +V L+ +G V+ ++ TPL AA H +D RL
Sbjct: 102 PSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSVDPTRL 161
Query: 63 L 63
L
Sbjct: 162 L 162
Score = 80.9 bits (201), Expect = 1e-18
Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Query: 4 VSVTDDHGFSPLHWACKEGHLKLVELLLQRGARVNAT-NRGDDTPLHLAAAHGHLDIVRL 62
V D + LHWA + LV+ + +GA V+ + TPLH A GHL +V
Sbjct: 35 VRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWATRQGHLSMVVQ 94
Query: 63 L 63
L
Sbjct: 95 L 95
Score = 76.3 bits (189), Expect = 4e-17
Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Query: 4 VSVTDDHGFSPLHWACKEGH-LKLVELLLQRGARVNATNRGD-DTPLHLAAAHGHLDIVR 61
V + D +G +PL WA H + LLL VN ++ +T LH A G+ ++
Sbjct: 135 VDMMDQNGMTPLMWAAYRTHSVDPTRLLLTFNVSVNLGDKYHKNTALHWAVLAGNTTVIS 194
Query: 62 LL 63
LL
Sbjct: 195 LL 196
Score = 45.9 bits (110), Expect = 3e-06
Identities = 6/34 (17%), Positives = 13/34 (38%)
Query: 8 DDHGFSPLHWACKEGHLKLVELLLQRGARVNATN 41
+ G S L A + ++ ++ L + N
Sbjct: 207 NIKGESALDLAKQRKNVWMINHLQEARQAKGYDN 240
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI,
structural genomics of pathogenic protozoa consortium,
SGPP, ANK repeat; 2.90A {Leishmania major}
Length = 364
Score = 89.2 bits (222), Expect = 5e-21
Identities = 19/71 (26%), Positives = 28/71 (39%), Gaps = 4/71 (5%)
Query: 4 VSVTDDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLL 63
+DD +H A ++G V L++ G NR T LHLA G +D + L
Sbjct: 13 RIKSDDENMEKIHVAARKGQTDEVRRLIETGVSPTIQNRFGCTALHLACKFGCVDTAKYL 72
Query: 64 ----AVQNNQD 70
V +
Sbjct: 73 ASVGEVHSLWH 83
Score = 85.7 bits (213), Expect = 1e-19
Identities = 16/76 (21%), Positives = 27/76 (35%), Gaps = 4/76 (5%)
Query: 4 VSVTDDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLL 63
+ + G S LHWA + ++ G VN + PL+L+ + + + L
Sbjct: 204 LDYANKQGNSHLHWAILINWEDVAMRFVEMGIDVNMEDNEHTVPLYLSVRAAMVLLTKEL 263
Query: 64 ----AVQNNQDLTKIN 75
V Q N
Sbjct: 264 LQKTDVFLIQACPYHN 279
Score = 80.3 bits (199), Expect = 7e-18
Identities = 18/62 (29%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 4 VSVTDDHGFSPLHWACKEG--HLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVR 61
V G + LHW G +L+++++L+Q GA A ++ D+TPL A + + +
Sbjct: 131 SHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGASPTAKDKADETPLMRAMEFRNREALD 190
Query: 62 LL 63
L+
Sbjct: 191 LM 192
Score = 79.9 bits (198), Expect = 1e-17
Identities = 16/60 (26%), Positives = 26/60 (43%), Gaps = 2/60 (3%)
Query: 4 VSVTDDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLL 63
++ + G + LH ACK G + + L G + + P+HLA D+V L
Sbjct: 46 PTIQNRFGCTALHLACKFGCVDTAKYLASVGEVHSLWH--GQKPIHLAVMANKTDLVVAL 103
Score = 78.0 bits (193), Expect = 5e-17
Identities = 5/56 (8%), Positives = 15/56 (26%)
Query: 8 DDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLL 63
+ A ++++LL ++ V + + R+
Sbjct: 287 RVVWLDFVPAAADPSKQEVLQLLQEKLDEVVRSLNTGAGGAVKRKKKAAPAVKRMK 342
Score = 77.2 bits (191), Expect = 1e-16
Identities = 11/65 (16%), Positives = 26/65 (40%), Gaps = 5/65 (7%)
Query: 4 VSVTDDHGFSPLHWACKEGHLKLVELLLQR-----GARVNATNRGDDTPLHLAAAHGHLD 58
+ D +PL A + + + ++L++ R++ N+ ++ LH A D
Sbjct: 166 PTAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILINWED 225
Query: 59 IVRLL 63
+
Sbjct: 226 VAMRF 230
Score = 72.6 bits (179), Expect = 4e-15
Identities = 12/73 (16%), Positives = 26/73 (35%), Gaps = 13/73 (17%)
Query: 4 VSVTDDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDD-------------TPLHL 50
V++ D+ PL+ + + + L + LLQ+ +
Sbjct: 237 VNMEDNEHTVPLYLSVRAAMVLLTKELLQKTDVFLIQACPYHNGTTVLPDRVVWLDFVPA 296
Query: 51 AAAHGHLDIVRLL 63
AA ++++LL
Sbjct: 297 AADPSKQEVLQLL 309
Score = 69.1 bits (170), Expect = 6e-14
Identities = 12/68 (17%), Positives = 23/68 (33%), Gaps = 7/68 (10%)
Query: 6 VTDDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLLA- 64
+ HG P+H A LV L++ P L ++ + +
Sbjct: 79 HSLWHGQKPIHLAVMANKTDLVVALVEGAKERGQ------MPESLLNECDEREVNEIGSH 132
Query: 65 VQNNQDLT 72
V++ + T
Sbjct: 133 VKHCKGQT 140
Score = 62.6 bits (153), Expect = 9e-12
Identities = 7/48 (14%), Positives = 15/48 (31%)
Query: 4 VSVTDDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLA 51
V + + G K+ + + L A V +R ++
Sbjct: 316 VVRSLNTGAGGAVKRKKKAAPAVKRMKLAPSAPVRTRSRSRARSSAVS 363
Score = 58.3 bits (142), Expect = 3e-10
Identities = 10/62 (16%), Positives = 23/62 (37%), Gaps = 8/62 (12%)
Query: 4 VSVTDDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHG--HLDIVR 61
V + G P + ++ E+ + + T LH G +L++++
Sbjct: 104 VEGAKERGQMPESLLNECDEREVNEIG------SHVKHCKGQTALHWCVGLGPEYLEMIK 157
Query: 62 LL 63
+L
Sbjct: 158 IL 159
Score = 42.9 bits (102), Expect = 4e-05
Identities = 8/35 (22%), Positives = 14/35 (40%)
Query: 29 LLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLL 63
+ ++ + +H+AA G D VR L
Sbjct: 5 MTDFPKLNRIKSDDENMEKIHVAARKGQTDEVRRL 39
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A
{Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Length = 156
Score = 84.0 bits (209), Expect = 1e-20
Identities = 22/60 (36%), Positives = 33/60 (55%)
Query: 4 VSVTDDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLL 63
+V D G SP+H A + G L +++L++ GA VN + P+HLA GH +V L
Sbjct: 61 PNVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFL 120
Score = 80.5 bits (200), Expect = 3e-19
Identities = 21/60 (35%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Query: 4 VSVTDDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLL 63
V+V D G P+H A +EGH +V L + ++ + TPL LA G D+V +L
Sbjct: 94 VNVPDGTGALPIHLAVQEGHTAVVSFLAA-ESDLHRRDARGLTPLELALQRGAQDLVDIL 152
Score = 79.8 bits (198), Expect = 4e-19
Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Query: 4 VSVTDDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLL 63
+ G + L G + LL++GA N + +P+H AA G LD +++L
Sbjct: 29 PDALNRFGKTALQVMM-FGSTAIALELLKQGASPNVQDTSGTSPVHDAARTGFLDTLKVL 87
Score = 71.7 bits (177), Expect = 6e-16
Identities = 14/54 (25%), Positives = 18/54 (33%), Gaps = 2/54 (3%)
Query: 11 GFSPLHWACKEGHLKLV-ELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLL 63
L A G ++ V LL + +A NR T L G I L
Sbjct: 2 AGDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQ-VMMFGSTAIALEL 54
Score = 39.3 bits (93), Expect = 2e-04
Identities = 9/28 (32%), Positives = 14/28 (50%)
Query: 4 VSVTDDHGFSPLHWACKEGHLKLVELLL 31
+ D G +PL A + G LV++L
Sbjct: 126 LHRRDARGLTPLELALQRGAQDLVDILQ 153
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription
regulation, autoantibody; 2.58A {Homo sapiens}
Length = 261
Score = 86.3 bits (215), Expect = 1e-20
Identities = 16/57 (28%), Positives = 27/57 (47%)
Query: 7 TDDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLL 63
+ SP+H A + GH++ V L+ G ++ TPL+LA + V+ L
Sbjct: 97 PESDLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKL 153
Score = 85.9 bits (214), Expect = 2e-20
Identities = 26/60 (43%), Positives = 32/60 (53%)
Query: 4 VSVTDDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLL 63
V++ SPLH AC GHL V++LL+ GA+VN TPL A G D V LL
Sbjct: 29 VNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGSWDCVNLL 88
Score = 85.6 bits (213), Expect = 2e-20
Identities = 22/60 (36%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Query: 4 VSVTDDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLL 63
V+ +PL AC G V LLLQ GA V + +P+H AA GH++ V L
Sbjct: 62 VNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQPESDL-ASPIHEAARRGHVECVNSL 120
Score = 84.8 bits (211), Expect = 6e-20
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Query: 4 VSVTDDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLL 63
+ H +PL+ AC+ V+ LL+ GA VN D+PLH A ++ LL
Sbjct: 127 IDHKISHLGTPLYLACENQQRACVKKLLESGADVNQGKGQ-DSPLHAVARTASEELACLL 185
Score = 83.6 bits (208), Expect = 2e-19
Identities = 19/53 (35%), Positives = 27/53 (50%)
Query: 11 GFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLL 63
+SP+H A GH + L+ +G VN +PLH A GHL V++L
Sbjct: 3 DWSPMHEAAIHGHQLSLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKIL 55
Score = 77.9 bits (193), Expect = 2e-17
Identities = 14/56 (25%), Positives = 20/56 (35%), Gaps = 2/56 (3%)
Query: 8 DDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLL 63
SPLH + +L LL+ GA A N P+ L + +L
Sbjct: 163 GKGQDSPLHAVARTASEELACLLMDFGADTQAKNAEGKRPVELVPPESP--LAQLF 216
Score = 77.1 bits (191), Expect = 4e-17
Identities = 10/60 (16%), Positives = 17/60 (28%), Gaps = 2/60 (3%)
Query: 4 VSVTDDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLL 63
+ G P+ E L +L L+R + H I +L+
Sbjct: 192 TQAKNAEGKRPVELVPPESPL--AQLFLEREGPPSLMQLCRLRIRKCFGIQQHHKITKLV 249
Score = 43.6 bits (104), Expect = 2e-05
Identities = 8/47 (17%), Positives = 13/47 (27%), Gaps = 8/47 (17%)
Query: 4 VSVTDDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHL 50
S+ + H K+ +L+L LHL
Sbjct: 223 PSLMQLCRLRIRKCFGIQQHHKITKLVLPEDL--------KQFLLHL 261
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin
repeat Pro ribosome display, apoptosis; 1.80A
{Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D*
4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P
2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Length = 169
Score = 84.0 bits (209), Expect = 2e-20
Identities = 31/60 (51%), Positives = 41/60 (68%)
Query: 4 VSVTDDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLL 63
V+ D G++PLH A GHL++VE+LL+ GA VNA + TPL LAA GHL+IV +L
Sbjct: 40 VNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHAGMTPLRLAALFGHLEIVEVL 99
Score = 83.2 bits (207), Expect = 4e-20
Identities = 23/60 (38%), Positives = 37/60 (61%)
Query: 4 VSVTDDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLL 63
V+ D G +PLH A GHL++VE+LL+ GA VNA ++ T ++ +G+ D+ +L
Sbjct: 106 VNANDMEGHTPLHLAAMFGHLEIVEVLLKNGADVNAQDKFGKTAFDISIDNGNEDLAEIL 165
Score = 81.6 bits (203), Expect = 1e-19
Identities = 31/60 (51%), Positives = 40/60 (66%)
Query: 4 VSVTDDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLL 63
V+ D G +PL A GHL++VE+LL+ GA VNA + TPLHLAA GHL+IV +L
Sbjct: 73 VNAVDHAGMTPLRLAALFGHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEIVEVL 132
Score = 75.5 bits (187), Expect = 2e-17
Identities = 23/53 (43%), Positives = 30/53 (56%)
Query: 11 GFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLL 63
L A + G V +L+ GA VNA + TPLHLAA +GHL+IV +L
Sbjct: 14 LGKKLLEAARAGRDDEVRILMANGADVNAEDASGWTPLHLAAFNGHLEIVEVL 66
Score = 38.1 bits (90), Expect = 6e-04
Identities = 7/29 (24%), Positives = 13/29 (44%)
Query: 4 VSVTDDHGFSPLHWACKEGHLKLVELLLQ 32
V+ D G + + G+ L E+L +
Sbjct: 139 VNAQDKFGKTAFDISIDNGNEDLAEILQK 167
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A
{Enterococcus faecalis}
Length = 201
Score = 84.4 bits (210), Expect = 2e-20
Identities = 20/75 (26%), Positives = 34/75 (45%), Gaps = 3/75 (4%)
Query: 4 VSVTDDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLL 63
V D G +PL+ A +++ + L+ RGA +N N D+P A A G +I+ +
Sbjct: 32 VDEVDTEGNTPLNIAVHNNDIEIAKALIDRGADINLQNSISDSPYLYAGAQGRTEILAYM 91
Query: 64 AVQNNQDLTKINFKD 78
D +N +
Sbjct: 92 LKHATPD---LNKHN 103
Score = 80.6 bits (200), Expect = 7e-19
Identities = 12/58 (20%), Positives = 27/58 (46%)
Query: 6 VTDDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLL 63
+ + L A + K+ E+L +V+ + +TPL++A + ++I + L
Sbjct: 1 MKTYEVGALLEAANQRDTKKVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKAL 58
Score = 79.8 bits (198), Expect = 1e-18
Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Query: 8 DDHGFSPLHWACKEGHLKLVELLLQRGAR-VNATNRGDDTPLHLAAAHGHLDIVRLL 63
+ SP +A +G +++ +L+ +N NR L AA GH+D V+LL
Sbjct: 69 NSISDSPYLYAGAQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLL 125
Score = 72.9 bits (180), Expect = 5e-16
Identities = 14/65 (21%), Positives = 31/65 (47%), Gaps = 5/65 (7%)
Query: 4 VSVTDDHGFSPLHWAC-----KEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLD 58
+ +D G++ L A + + +V+LL++ GA + + T + A G+ +
Sbjct: 133 IDFQNDFGYTALIEAVGLREGNQLYQDIVKLLMENGADQSIKDNSGRTAMDYANQKGYTE 192
Query: 59 IVRLL 63
I ++L
Sbjct: 193 ISKIL 197
Score = 71.7 bits (177), Expect = 2e-15
Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 6/66 (9%)
Query: 4 VSVTDDHGFSPLHWACKEGHLKLVELLLQRG-ARVNATNRGDDTPLHLAAA-----HGHL 57
++ + +G + L A ++GH+ V+LLL+ G ++ N T L A +
Sbjct: 99 LNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQLYQ 158
Query: 58 DIVRLL 63
DIV+LL
Sbjct: 159 DIVKLL 164
Score = 40.5 bits (96), Expect = 2e-04
Identities = 7/29 (24%), Positives = 19/29 (65%)
Query: 4 VSVTDDHGFSPLHWACKEGHLKLVELLLQ 32
S+ D+ G + + +A ++G+ ++ ++L Q
Sbjct: 171 QSIKDNSGRTAMDYANQKGYTEISKILAQ 199
>1awc_B Protein (GA binding protein beta 1); complex (transcription
regulation/DNA), DNA-binding, nuclear protein, ETS
domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus
musculus} SCOP: d.211.1.1
Length = 153
Score = 83.2 bits (207), Expect = 2e-20
Identities = 27/57 (47%), Positives = 36/57 (63%)
Query: 7 TDDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLL 63
TD G SPLH A + GH E+LL+ G +A + D TPLH+AA+ GH +IV +L
Sbjct: 30 TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPLHMAASEGHANIVEVL 86
Score = 81.7 bits (203), Expect = 9e-20
Identities = 18/60 (30%), Positives = 34/60 (56%)
Query: 4 VSVTDDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLL 63
V+ D + LHWA + H ++VELL++ GA V+ ++ T ++ +G+ D+ +L
Sbjct: 93 VNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEIL 152
Score = 79.4 bits (197), Expect = 6e-19
Identities = 25/56 (44%), Positives = 32/56 (57%)
Query: 8 DDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLL 63
+PLH A EGH +VE+LL+ GA VNA + T LH A H H ++V LL
Sbjct: 64 TKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELL 119
Score = 72.0 bits (178), Expect = 3e-16
Identities = 17/53 (32%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
Query: 11 GFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLL 63
L A + G V +L+ GA G +PLHLAA +GH +L
Sbjct: 2 LGKKLLEAARAGQDDEVRILMANGAPFTTDWLG-TSPLHLAAQYGHFSTTEVL 53
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat,
alternative splicing, ANK repeat, chromatin regulator,
nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP:
k.37.1.1 PDB: 3b95_A*
Length = 237
Score = 85.2 bits (212), Expect = 3e-20
Identities = 20/60 (33%), Positives = 33/60 (55%)
Query: 4 VSVTDDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLL 63
+ + SPLH A + GH+ + +L+Q GA ++ + TPL AA + HL+ V+ L
Sbjct: 4 FKMEHQNKRSPLHAAAEAGHVDICHMLVQAGANIDTCSEDQRTPLMEAAENNHLEAVKYL 63
Score = 84.0 bits (209), Expect = 6e-20
Identities = 23/60 (38%), Positives = 38/60 (63%)
Query: 4 VSVTDDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLL 63
V+ DD G++P+ WA + H+ LV+LLL +G+ +N + ++ LH AA G +DI +L
Sbjct: 104 VNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSDINIRDNEENICLHWAAFSGCVDIAEIL 163
Score = 83.6 bits (208), Expect = 9e-20
Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
Query: 4 VSVTDDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLL 63
+ + +PL A + HL+ V+ L++ GA V+ + T LHLAA GH ++V+ L
Sbjct: 37 IDTCSEDQRTPLMEAAENNHLEAVKYLIKAGALVDPKDAEGSTCLHLAAKKGHYEVVQYL 96
Query: 64 AVQNNQDLTKINFKD 78
D +N +D
Sbjct: 97 LSNGQMD---VNCQD 108
Score = 83.6 bits (208), Expect = 1e-19
Identities = 20/60 (33%), Positives = 31/60 (51%)
Query: 4 VSVTDDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLL 63
+++ D+ LHWA G + + E+LL ++A N D+PLH+AA D V L
Sbjct: 137 INIRDNEENICLHWAAFSGCVDIAEILLAAKCDLHAVNIHGDSPLHIAARENRYDCVVLF 196
Score = 82.8 bits (206), Expect = 2e-19
Identities = 18/60 (30%), Positives = 28/60 (46%)
Query: 4 VSVTDDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLL 63
+ + HG SPLH A +E V L L R + V N+ +TPL A+ + + +
Sbjct: 170 LHAVNIHGDSPLHIAARENRYDCVVLFLSRDSDVTLKNKEGETPLQCASLNSQVWSALQM 229
Score = 78.2 bits (194), Expect = 1e-17
Identities = 23/57 (40%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 8 DDHGFSPLHWACKEGHLKLVELLLQRGAR-VNATNRGDDTPLHLAAAHGHLDIVRLL 63
D G + LH A K+GH ++V+ LL G VN + G TP+ A + H+D+V+LL
Sbjct: 74 DAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLL 130
Score = 40.9 bits (97), Expect = 1e-04
Identities = 5/32 (15%), Positives = 12/32 (37%)
Query: 4 VSVTDDHGFSPLHWACKEGHLKLVELLLQRGA 35
V++ + G +PL A + + +
Sbjct: 203 VTLKNKEGETPLQCASLNSQVWSALQMSKALQ 234
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and
SOCS box-containing...; ASB9, ANK repeat, L-shaped,
structural protein; 2.20A {Homo sapiens}
Length = 285
Score = 85.6 bits (213), Expect = 4e-20
Identities = 26/60 (43%), Positives = 32/60 (53%)
Query: 4 VSVTDDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLL 63
V++ SPLH AC GHL V++LL+ GA+VN TPL A G D V LL
Sbjct: 85 VNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGSWDCVNLL 144
Score = 85.6 bits (213), Expect = 4e-20
Identities = 16/57 (28%), Positives = 27/57 (47%)
Query: 7 TDDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLL 63
+ SP+H A + GH++ V L+ G ++ TPL+LA + V+ L
Sbjct: 153 PESDLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKL 209
Score = 85.2 bits (212), Expect = 5e-20
Identities = 22/60 (36%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Query: 4 VSVTDDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLL 63
V+ +PL AC G V LLLQ GA V + +P+H AA GH++ V L
Sbjct: 118 VNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQPESDL-ASPIHEAARRGHVECVNSL 176
Score = 83.7 bits (208), Expect = 2e-19
Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Query: 4 VSVTDDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLL 63
+ H +PL+ AC+ V+ LL+ GA VN D+PLH ++ LL
Sbjct: 183 IDHKISHLGTPLYLACENQQRACVKKLLESGADVNQGKGQ-DSPLHAVVRTASEELACLL 241
Score = 83.3 bits (207), Expect = 3e-19
Identities = 19/58 (32%), Positives = 27/58 (46%)
Query: 6 VTDDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLL 63
+SP+H A GH + L+ +G VN +PLH A GHL V++L
Sbjct: 54 GDAVSDWSPMHEAAIHGHQLSLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKIL 111
Score = 79.8 bits (198), Expect = 5e-18
Identities = 15/56 (26%), Positives = 20/56 (35%)
Query: 8 DDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLL 63
SPLH + +L LL+ GA A N P+ L L + L
Sbjct: 219 GKGQDSPLHAVVRTASEELACLLMDFGADTQAKNAEGKRPVELVPPESPLAQLFLE 274
Score = 59.0 bits (144), Expect = 1e-10
Identities = 16/57 (28%), Positives = 21/57 (36%), Gaps = 7/57 (12%)
Query: 7 TDDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLL 63
G P G LL +A + D +P+H AA HGH +R L
Sbjct: 29 GGMDGSKPAGPRDFPGIR-----LLSNPLMGDAVS--DWSPMHEAAIHGHQLSLRNL 78
Score = 54.0 bits (131), Expect = 6e-09
Identities = 8/60 (13%), Positives = 15/60 (25%), Gaps = 5/60 (8%)
Query: 18 ACKEGHLKLVELLLQRGARVNATNRGDD-----TPLHLAAAHGHLDIVRLLAVQNNQDLT 72
H L+ RG+ + + + P G + L D +
Sbjct: 2 GSSHHHHHHSSGLVPRGSHMASMDGKQGGMDGSKPAGPRDFPGIRLLSNPLMGDAVSDWS 61
Score = 44.8 bits (107), Expect = 7e-06
Identities = 7/37 (18%), Positives = 11/37 (29%), Gaps = 1/37 (2%)
Query: 4 VSVTDDHGFSPLHWACKEGHLKLVELLLQRGARVNAT 40
+ G P+ E L L + GA +
Sbjct: 248 TQAKNAEGKRPVELVPPESPLA-QLFLEREGASLPKP 283
Score = 27.5 bits (62), Expect = 4.2
Identities = 3/14 (21%), Positives = 6/14 (42%)
Query: 50 LAAAHGHLDIVRLL 63
+ ++H H L
Sbjct: 1 MGSSHHHHHHSSGL 14
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene
family, nuclear protein, phosphorylation, disease
mutation, polymorphism; 2.20A {Homo sapiens} SCOP:
b.34.2.1 d.211.1.1 PDB: 4a63_B
Length = 239
Score = 84.6 bits (210), Expect = 4e-20
Identities = 24/75 (32%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 4 VSVTDDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLL 63
S+ +D G + LH A GH ++V+ L+Q G VNA + TPLH AA+ ++ + + L
Sbjct: 63 PSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFL 122
Query: 64 AVQNNQDLTKINFKD 78
V++ + + + D
Sbjct: 123 -VESGAAVFAMTYSD 136
Score = 81.9 bits (203), Expect = 4e-19
Identities = 10/56 (17%), Positives = 18/56 (32%), Gaps = 1/56 (1%)
Query: 8 DDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLL 63
+ G L + K + G RV L ++ G D+V+ +
Sbjct: 2 EITGQVSLPPGKRTNLRKTGSERIAHGMRVKFNPLP-LALLLDSSLEGEFDLVQRI 56
Score = 81.9 bits (203), Expect = 4e-19
Identities = 15/56 (26%), Positives = 24/56 (42%)
Query: 8 DDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLL 63
+ + L + EG LV+ ++ + N T LH A GH +IV+ L
Sbjct: 34 NPLPLALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFL 89
Score = 63.4 bits (155), Expect = 3e-12
Identities = 10/68 (14%), Positives = 23/68 (33%), Gaps = 4/68 (5%)
Query: 8 DDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLLAVQN 67
D + +EG+ + + L ++ N+G L + L ++
Sbjct: 136 DMQTAADKCEEMEEGYTQCSQFLYGVQEKMGIMNKGVIYALWDYEPQNDDE----LPMKE 191
Query: 68 NQDLTKIN 75
+T I+
Sbjct: 192 GDCMTIIH 199
Score = 38.0 bits (89), Expect = 0.001
Identities = 7/55 (12%), Positives = 17/55 (30%), Gaps = 5/55 (9%)
Query: 4 VSVTDDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDD--TPLHLAAAHGH 56
+ + + L + EL ++ G + +R D+ A +
Sbjct: 165 MGIMNKGVIYALWDYEPQNDD---ELPMKEGDCMTIIHREDEDEIEWWWARLNDK 216
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Length = 285
Score = 85.7 bits (213), Expect = 4e-20
Identities = 15/61 (24%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Query: 4 VSVTDDHGFSPLHWACKEGHLKLVELLLQRGARVNATNR-GDDTPLHLAAAHGHLDIVRL 62
S DD G + L++A G+++ V+L +++ R+ + G T + A + IV
Sbjct: 88 DSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSY 147
Query: 63 L 63
Sbjct: 148 F 148
Score = 84.9 bits (211), Expect = 7e-20
Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Query: 4 VSVTDDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLL 63
D HG S ++A + +++LV LL GA N ++ PLH AA IV++L
Sbjct: 24 TFKADVHGHSASYYAIADNNVRLVCTLLNAGALKNLLE--NEFPLHQAATLEDTKIVKIL 81
Score = 83.0 bits (206), Expect = 4e-19
Identities = 21/77 (27%), Positives = 35/77 (45%), Gaps = 6/77 (7%)
Query: 10 HGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLLAVQNNQ 69
PLH A K+V++LL G + + +T L+ A G++ V+L V+ N
Sbjct: 61 ENEFPLHQAATLEDTKIVKILLFSGLDDSQFDDKGNTALYYAVDSGNMQTVKLF-VKKNW 119
Query: 70 DLTKINFKDQSWLGLKT 86
+ F ++ G KT
Sbjct: 120 R---LMFYGKT--GWKT 131
Score = 77.2 bits (191), Expect = 5e-17
Identities = 14/57 (24%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
Query: 8 DDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTP-LHLAAAHGHLDIVRLL 63
S +H K GH+ ++ LLL N N P + LA + +++++ L
Sbjct: 158 LAILLSCIHITIKNGHVDMMILLLDYMTSTNTNNSLLFIPDIKLAIDNKDIEMLQAL 214
Score = 76.4 bits (189), Expect = 1e-16
Identities = 10/61 (16%), Positives = 22/61 (36%), Gaps = 2/61 (3%)
Query: 4 VSVTDDHGFS-PLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRL 62
+ G+ + A + +V L + +H+ +GH+D++ L
Sbjct: 121 LMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTFDLAIL-LSCIHITIKNGHVDMMIL 179
Query: 63 L 63
L
Sbjct: 180 L 180
Score = 69.5 bits (171), Expect = 3e-14
Identities = 5/72 (6%), Positives = 21/72 (29%), Gaps = 12/72 (16%)
Query: 4 VSVTDDHGFSP-LHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRL 62
+ + F P + A +++++ L + + + +I ++
Sbjct: 187 TNTNNSLLFIPDIKLAIDNKDIEMLQALFKYDINIY-------SANLENVLLDDAEIAKM 239
Query: 63 L----AVQNNQD 70
+ +
Sbjct: 240 IIEKHVEYKSDS 251
Score = 56.4 bits (137), Expect = 1e-09
Identities = 9/64 (14%), Positives = 20/64 (31%), Gaps = 7/64 (10%)
Query: 11 GFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLL----AVQ 66
G K ++ L + + + A A ++ +V L A++
Sbjct: 1 GMDLSRINT--WKSKQLKSFLS-SKDTFKADVHGHSASYYAIADNNVRLVCTLLNAGALK 57
Query: 67 NNQD 70
N +
Sbjct: 58 NLLE 61
Score = 51.0 bits (123), Expect = 8e-08
Identities = 2/45 (4%), Positives = 14/45 (31%)
Query: 13 SPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHL 57
S ++ ++++++ + + D + +
Sbjct: 223 SANLENVLLDDAEIAKMIIEKHVEYKSDSYTKDLDIVKNNKLDEI 267
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein
complex, transcription factors, nuclear localization,
DNA binding protein; 2.05A {Mus musculus} SCOP:
d.211.1.1 PDB: 1k3z_D
Length = 282
Score = 85.3 bits (212), Expect = 5e-20
Identities = 21/61 (34%), Positives = 26/61 (42%)
Query: 3 YVSVTDDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRL 62
Y+ + +D G + LH A G VE L GA V RG T LHLA +
Sbjct: 37 YLDLQNDLGQTALHLAAILGEASTVEKLYAAGAGVLVAERGGHTALHLACRVRAHTCACV 96
Query: 63 L 63
L
Sbjct: 97 L 97
Score = 82.2 bits (204), Expect = 7e-19
Identities = 20/57 (35%), Positives = 27/57 (47%)
Query: 7 TDDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLL 63
G +PLH A + ++ELLL+ GA A G TPL A + + RLL
Sbjct: 188 EPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRPNPILARLL 244
Score = 80.3 bits (199), Expect = 3e-18
Identities = 18/60 (30%), Positives = 24/60 (40%), Gaps = 3/60 (5%)
Query: 7 TDDHGFSPLHWACKEGHLKLVELLLQRGA---RVNATNRGDDTPLHLAAAHGHLDIVRLL 63
+ G + LH A H ++ LL A ++ N T LHLAA G V L
Sbjct: 5 VTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKL 64
Score = 80.3 bits (199), Expect = 3e-18
Identities = 19/61 (31%), Positives = 27/61 (44%), Gaps = 1/61 (1%)
Query: 4 VSVTDDHGFSPLHWACKEGHLKLVELLLQRGARVNA-TNRGDDTPLHLAAAHGHLDIVRL 62
+ + G +PLH A ++V LL GA +N TPLHLA ++ L
Sbjct: 151 LEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLEL 210
Query: 63 L 63
L
Sbjct: 211 L 211
Score = 79.5 bits (197), Expect = 7e-18
Identities = 11/60 (18%), Positives = 17/60 (28%)
Query: 4 VSVTDDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLL 63
+ G +PL A + L LL GA +P + + D
Sbjct: 218 PTARMYGGRTPLGSALLRPNPILARLLRAHGAPEPEDGGDKLSPCSSSGSDSDSDNRDEG 277
Score = 65.6 bits (161), Expect = 6e-13
Identities = 15/59 (25%), Positives = 22/59 (37%), Gaps = 1/59 (1%)
Query: 6 VTDDHGFSPLHWACKEGHLKLV-ELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLL 63
T D +P + ++ A N TPLH+A H ++VRLL
Sbjct: 119 CTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLL 177
Score = 63.7 bits (156), Expect = 3e-12
Identities = 12/89 (13%), Positives = 22/89 (24%), Gaps = 16/89 (17%)
Query: 4 VSVTDDHGFSPLHWACKEGHLKLVELLLQRGARVNA-------------TNRGDDTPLHL 50
V V + G + LH AC+ +LLQ T P +
Sbjct: 71 VLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAV 130
Query: 51 AAAHGHLDIVRLLAVQNNQDLTKINFKDQ 79
+ + + ++
Sbjct: 131 DSQPNPENEEEPRDEDWRLQ---LEAENY 156
Score = 46.4 bits (111), Expect = 2e-06
Identities = 9/42 (21%), Positives = 16/42 (38%), Gaps = 1/42 (2%)
Query: 37 VNATNRGDDTPLHLAAAHGHLDIVRLLAVQNNQDLTKINFKD 78
DT LHLA H H + L + + ++ ++
Sbjct: 2 FGYVTEDGDTALHLAVIHQHEPFLDFL-LGFSAGHEYLDLQN 42
Score = 36.0 bits (84), Expect = 0.006
Identities = 2/31 (6%), Positives = 6/31 (19%)
Query: 4 VSVTDDHGFSPLHWACKEGHLKLVELLLQRG 34
SP + + + +
Sbjct: 251 EPEDGGDKLSPCSSSGSDSDSDNRDEGDEYD 281
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription
factors, ikappab proteins; 1.86A {Homo sapiens} SCOP:
d.211.1.1 PDB: 1k1b_A
Length = 241
Score = 84.0 bits (209), Expect = 6e-20
Identities = 18/75 (24%), Positives = 30/75 (40%)
Query: 4 VSVTDDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLL 63
+ + ++ +PLH A +V LL+ GA A +R T HLA H +R L
Sbjct: 39 LDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASPMALDRHGQTAAHLACEHRSPTCLRAL 98
Query: 64 AVQNNQDLTKINFKD 78
+ ++
Sbjct: 99 LDSAAPGTLDLEARN 113
Score = 83.7 bits (208), Expect = 1e-19
Identities = 22/60 (36%), Positives = 31/60 (51%)
Query: 4 VSVTDDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLL 63
V+ G S LH A G L LV L++ GA + N +DTPL +A + +DI+R
Sbjct: 176 VNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVARSRRVIDILRGK 235
Score = 81.0 bits (201), Expect = 1e-18
Identities = 24/55 (43%), Positives = 30/55 (54%)
Query: 9 DHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLL 63
G SPL A + L +V+LLLQ GA VNA + LH A+ G L +VR L
Sbjct: 148 KSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTL 202
Score = 78.3 bits (194), Expect = 9e-18
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 4 VSVTDDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGD-DTPLHLAAAHGHLDIVRL 62
+ + G + LH A + V+LLL+RGA ++A + +PL A + L +V+L
Sbjct: 109 LEARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQL 168
Query: 63 L 63
L
Sbjct: 169 L 169
Score = 78.3 bits (194), Expect = 1e-17
Identities = 23/60 (38%), Positives = 31/60 (51%), Gaps = 4/60 (6%)
Query: 8 DDHGFSPLHWACKEGHLKLVELLL----QRGARVNATNRGDDTPLHLAAAHGHLDIVRLL 63
D+ G +PLH A +G+L V L+ Q G ++ N TPLHLA +VRLL
Sbjct: 6 DEDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLL 65
Score = 44.0 bits (105), Expect = 1e-05
Identities = 7/32 (21%), Positives = 13/32 (40%)
Query: 4 VSVTDDHGFSPLHWACKEGHLKLVELLLQRGA 35
S+ + H +PL A + ++ R A
Sbjct: 209 SSLKNCHNDTPLMVARSRRVIDILRGKATRPA 240
Score = 39.7 bits (94), Expect = 3e-04
Identities = 11/45 (24%), Positives = 18/45 (40%)
Query: 37 VNATNRGDDTPLHLAAAHGHLDIVRLLAVQNNQDLTKINFKDQSW 81
+ DTPLH+A G+L V L Q +++ +
Sbjct: 2 ATRADEDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLR 46
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo
protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Length = 110
Score = 80.7 bits (200), Expect = 6e-20
Identities = 22/56 (39%), Positives = 31/56 (55%)
Query: 8 DDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLL 63
L A + G V +L+ GA V A ++ TPLHLAA +GHL++V+LL
Sbjct: 21 GSDLGKKLLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLL 76
Score = 70.7 bits (174), Expect = 4e-16
Identities = 22/60 (36%), Positives = 38/60 (63%)
Query: 4 VSVTDDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLL 63
V+ D +G +PLH A + GHL++V+LLL+ GA V A ++ T ++ +G+ D+ +L
Sbjct: 50 VAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDISIDNGNEDLAEIL 109
Score = 64.1 bits (157), Expect = 1e-13
Identities = 12/46 (26%), Positives = 17/46 (36%), Gaps = 3/46 (6%)
Query: 18 ACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLL 63
H L+ RG+ + + L AA G D VR+L
Sbjct: 1 GSSHHHHHHSSGLVPRGSHMGSDLG---KKLLEAARAGQDDEVRIL 43
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate
recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo
sapiens} PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A
3twq_A 3twu_A 2y0i_S*
Length = 165
Score = 82.4 bits (205), Expect = 7e-20
Identities = 28/60 (46%), Positives = 35/60 (58%)
Query: 4 VSVTDDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLL 63
V D G PLH AC GH ++ ELL++ GA VN + TPLH AAA G +I +LL
Sbjct: 68 VHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLL 127
Score = 80.5 bits (200), Expect = 3e-19
Identities = 22/56 (39%), Positives = 34/56 (60%)
Query: 8 DDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLL 63
+ +PLH+A + +VE LLQ GA V+A ++G PLH A ++GH ++ LL
Sbjct: 39 EGRQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELL 94
Score = 77.8 bits (193), Expect = 4e-18
Identities = 26/60 (43%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 4 VSVTDDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLL 63
V+V D F+PLH A +G ++ +LLLQ GA NR +TPL L G DI LL
Sbjct: 101 VNVADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNRDGNTPLDL-VKDGDTDIQDLL 159
Score = 71.3 bits (176), Expect = 1e-15
Identities = 14/57 (24%), Positives = 21/57 (36%), Gaps = 1/57 (1%)
Query: 8 DDHGFSPLHWACKEGHLKLVELLLQR-GARVNATNRGDDTPLHLAAAHGHLDIVRLL 63
+ L A K G ++ V+ L TPLH AA + + +V L
Sbjct: 5 NSEADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYL 61
Score = 37.4 bits (88), Expect = 0.001
Identities = 8/28 (28%), Positives = 13/28 (46%), Gaps = 1/28 (3%)
Query: 8 DDHGFSPLHWACKEGHLKLVELLLQRGA 35
+ G +PL K+G + +LL A
Sbjct: 138 NRDGNTPLDLV-KDGDTDIQDLLRGDAA 164
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT
signaling, POL ribosylation, transferase-signaling
protein complex; 2.00A {Mus musculus}
Length = 351
Score = 85.6 bits (213), Expect = 8e-20
Identities = 23/60 (38%), Positives = 36/60 (60%)
Query: 4 VSVTDDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLL 63
+D +PLH A +++V+LLLQ GA V+A ++G PLH A ++GH ++ LL
Sbjct: 51 CHASDGRKSTPLHLAAGYNRVRIVQLLLQHGADVHAKDKGGLVPLHNACSYGHYEVTELL 110
Score = 84.5 bits (210), Expect = 2e-19
Identities = 23/60 (38%), Positives = 34/60 (56%)
Query: 4 VSVTDDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLL 63
V+ + +PLH A + H ++E+L + GA++NA + T LH AA GHL RLL
Sbjct: 240 VNEKNKDFMTPLHVAAERAHNDVMEVLHKHGAKMNALDSLGQTALHRAALAGHLQTCRLL 299
Score = 84.5 bits (210), Expect = 2e-19
Identities = 27/60 (45%), Positives = 35/60 (58%)
Query: 4 VSVTDDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLL 63
V D G PLH AC GH ++ ELLL+ GA VNA + TPLH AA+ +++ LL
Sbjct: 84 VHAKDKGGLVPLHNACSYGHYEVTELLLKHGACVNAMDLWQFTPLHEAASKNRVEVCSLL 143
Score = 80.6 bits (200), Expect = 5e-18
Identities = 16/79 (20%), Positives = 29/79 (36%), Gaps = 9/79 (11%)
Query: 4 VSVTDDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLL 63
V+ D F+PLH A + +++ LLL GA N + + +A + +
Sbjct: 117 VNAMDLWQFTPLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPELRERLTYE 176
Query: 64 ---------AVQNNQDLTK 73
A + + K
Sbjct: 177 FKGHSLLQAAREADLAKVK 195
Score = 77.1 bits (191), Expect = 9e-17
Identities = 23/63 (36%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Query: 4 VSVTDDHGFSPLHWACKEGHLKL---VELLLQRGARVNATNRGDDTPLHLAAAHGHLDIV 60
+ LH A H K ELLL++GA VN N+ TPLH+AA H D++
Sbjct: 204 NFKQPQSHETALHCAVASLHPKRKQVAELLLRKGANVNEKNKDFMTPLHVAAERAHNDVM 263
Query: 61 RLL 63
+L
Sbjct: 264 EVL 266
Score = 76.0 bits (188), Expect = 2e-16
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 4 VSVTDDHGFSPLHWACKEGHLK-LVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRL 62
+T ++ L A + G+ + L+ LL +A++ TPLHLAA + + IV+L
Sbjct: 17 AVLTGEYKKDELLEAARSGNEEKLMALLTPLNVNCHASDGRKSTPLHLAAGYNRVRIVQL 76
Query: 63 L 63
L
Sbjct: 77 L 77
Score = 66.7 bits (164), Expect = 4e-13
Identities = 15/71 (21%), Positives = 26/71 (36%), Gaps = 9/71 (12%)
Query: 4 VSVTDDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLL 63
++ D G + LH A GHL+ LLL G+ + + T + + V+ +
Sbjct: 273 MNALDSLGQTALHRAALAGHLQTCRLLLSYGSDPSIISLQGFTAAQMGN-----EAVQQI 327
Query: 64 ----AVQNNQD 70
D
Sbjct: 328 LSESTPMRTSD 338
Score = 59.4 bits (145), Expect = 1e-10
Identities = 14/84 (16%), Positives = 22/84 (26%), Gaps = 24/84 (28%)
Query: 4 VSVTDDHGFSPLHWACKEGHL---------------------KLVELLLQRGARVNATNR 42
++ + HG S + A V+ L +
Sbjct: 150 PTLVNCHGKSAVDMAPTPELRERLTYEFKGHSLLQAAREADLAKVKKTLALEIINFKQPQ 209
Query: 43 GDDTPLHLAAAHGH---LDIVRLL 63
+T LH A A H + LL
Sbjct: 210 SHETALHCAVASLHPKRKQVAELL 233
Score = 49.8 bits (120), Expect = 2e-07
Identities = 9/52 (17%), Positives = 18/52 (34%), Gaps = 7/52 (13%)
Query: 4 VSVTDDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHG 55
S+ GF+ + V+ +L + ++ D L A+ G
Sbjct: 306 PSIISLQGFTAAQMGNEA-----VQQILSESTPMRTSD--VDYRLLEASKAG 350
Score = 44.0 bits (105), Expect = 2e-05
Identities = 11/57 (19%), Positives = 17/57 (29%), Gaps = 3/57 (5%)
Query: 25 KLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLLAVQNNQDLTKINFKDQSW 81
K L A+ T L AA G+ + + L N + + D
Sbjct: 5 KSALDLADPSAKAVLTGEYKKDELLEAARSGNEEKLMALLTPLNVN---CHASDGRK 58
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A;
1.80A {Homo sapiens} SCOP: d.211.1.1
Length = 285
Score = 84.8 bits (211), Expect = 9e-20
Identities = 22/84 (26%), Positives = 37/84 (44%), Gaps = 4/84 (4%)
Query: 4 VSVTDDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLL 63
+ +G +P A G +KL++L L +GA VN + T AA +G + ++ L
Sbjct: 65 PVLRKKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFL 124
Query: 64 ----AVQNNQDLTKINFKDQSWLG 83
A N + TK + + G
Sbjct: 125 YKRGANVNLRRKTKEDQERLRKGG 148
Score = 81.7 bits (203), Expect = 1e-18
Identities = 19/57 (33%), Positives = 31/57 (54%)
Query: 7 TDDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLL 63
++ G++PLH A + +VELLL+ GA + TP LAA G + +++L
Sbjct: 35 EEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFLLAAIAGSVKLLKLF 91
Score = 81.4 bits (202), Expect = 1e-18
Identities = 22/61 (36%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Query: 4 VSVTDDHGFSPLHWACKEGHLKLVELLL-QRGARVNATNRGDDTPLHLAAAHGHLDIVRL 62
V+V + G +PL A ++ HL LV+ LL Q +N T+ T L LA I L
Sbjct: 212 VNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAEL 271
Query: 63 L 63
L
Sbjct: 272 L 272
Score = 77.1 bits (191), Expect = 4e-17
Identities = 21/54 (38%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Query: 11 GFSPLHWACKEGHLKLVELLLQRGARVNA-TNRGDDTPLHLAAAHGHLDIVRLL 63
L A + + LV+ LL+ GA VN G TPLH A DIV LL
Sbjct: 5 DNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELL 58
Score = 77.1 bits (191), Expect = 5e-17
Identities = 24/75 (32%), Positives = 31/75 (41%), Gaps = 7/75 (9%)
Query: 8 DDHGFSPLHWACKEGHLK----LVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLL 63
D+ G + L A + LLL GA VN TPL LA HL +V+ L
Sbjct: 179 DNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRL 238
Query: 64 AVQNNQDLTKINFKD 78
Q + + IN D
Sbjct: 239 LEQEHIE---INDTD 250
Score = 76.4 bits (189), Expect = 9e-17
Identities = 23/85 (27%), Positives = 40/85 (47%), Gaps = 13/85 (15%)
Query: 4 VSVTDDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDD----------TPLHLAAA 53
V+ D +GF+ A G +K ++ L +RGA VN + + T L AA
Sbjct: 98 VNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAE 157
Query: 54 HGHLDIVRLLAVQNNQDLTKINFKD 78
GH++++++L + D +N D
Sbjct: 158 KGHVEVLKILLDEMGAD---VNACD 179
Score = 70.6 bits (174), Expect = 9e-15
Identities = 17/65 (26%), Positives = 28/65 (43%), Gaps = 5/65 (7%)
Query: 4 VSVTDDHGFSPLHWACKEGHLKLVELLL-QRGARVNATNRGDDTPLHLAAAHGH----LD 58
G + L A ++GH++++++LL + GA VNA + L A
Sbjct: 141 QERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEA 200
Query: 59 IVRLL 63
I LL
Sbjct: 201 ITHLL 205
Score = 51.3 bits (124), Expect = 5e-08
Identities = 12/35 (34%), Positives = 18/35 (51%)
Query: 7 TDDHGFSPLHWACKEGHLKLVELLLQRGARVNATN 41
TD G + L A + K+ ELL +RGA + +
Sbjct: 249 TDSDGKTALLLAVELKLKKIAELLCKRGASTDCGD 283
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC,
transferase, protein KI; HET: GVD; 1.95A {Homo sapiens}
PDB: 3q4t_A* 2qlu_A*
Length = 322
Score = 85.2 bits (211), Expect = 9e-20
Identities = 30/125 (24%), Positives = 47/125 (37%), Gaps = 10/125 (8%)
Query: 99 ISLNDLSLHTKISSGPNGDTWRGRWQKNDIVAKILAVRNCTPRVSRDFNEEFPKLRIFSH 158
L L + G G W+ + + KI +++ + S E L H
Sbjct: 21 FQSMPLQLLEVKARGRFGCVWKAQLLNEYVAVKIFPIQD---KQSWQNEYEVYSLPGMKH 77
Query: 159 PNVLPVIGCVNSPPD----LVVISQYMAWGSLYALLHEGAGIVVDFAQALRFAVDVARGM 214
N+L IG L +I+ + GSL L VV + + A +ARG+
Sbjct: 78 ENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKAN---VVSWNELCHIAETMARGL 134
Query: 215 AFLHS 219
A+LH
Sbjct: 135 AYLHE 139
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural
genomics, structural genomics consortium, ATP-binding,
disease mutation; HET: ADP; 2.35A {Homo sapiens}
Length = 336
Score = 85.3 bits (211), Expect = 1e-19
Identities = 31/145 (21%), Positives = 56/145 (38%), Gaps = 21/145 (14%)
Query: 99 ISLNDLSLHTKISSGPNGDTWRGRWQKNDIVAKILAVRNCTPRVSRDFNEE-----FPKL 153
+ L++L L I G G ++G + + K+ + N ++F E P +
Sbjct: 10 LDLDNLKLLELIGRGRYGAVYKGSLDERPVAVKVFSFAN-----RQNFINEKNIYRVPLM 64
Query: 154 RIFSHPNVLPVIGC-----VNSPPDLVVISQYMAWGSLYALLHEGAGIVVDFAQALRFAV 208
H N+ I + + +++ +Y GSL L D+ + R A
Sbjct: 65 E---HDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLH---TSDWVSSCRLAH 118
Query: 209 DVARGMAFLHSLERIIPQYQLNSRH 233
V RG+A+LH+ Y+ H
Sbjct: 119 SVTRGLAYLHTELPRGDHYKPAISH 143
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle
inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A
{Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A
1mx2_A 1mx6_A
Length = 162
Score = 81.7 bits (203), Expect = 1e-19
Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
Query: 8 DDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLLAVQN 67
D GF+ +H A + G L ++ LL+ A VN + + PLHLAA GHL +V L
Sbjct: 67 DRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHT 126
Query: 68 NQDLTKINFKD 78
+ + ++
Sbjct: 127 ASN---VGHRN 134
Score = 79.7 bits (198), Expect = 6e-19
Identities = 25/61 (40%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 4 VSVTDDHGFSPLHWACKEGHLKLVELLLQRGAR-VNATNRGDDTPLHLAAAHGHLDIVRL 62
V++ D+ G PLH A KEGHL++VE L++ A V N DT LA +G ++V L
Sbjct: 96 VNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSL 155
Query: 63 L 63
+
Sbjct: 156 M 156
Score = 77.0 bits (191), Expect = 6e-18
Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Query: 4 VSVTDDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLL 63
V+ + G + L K G+ ++ LL RGA + +R +H AA G LD ++ L
Sbjct: 31 VNAQNGFGRTALQVM-KLGNPEIARRLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTL 89
Score = 74.7 bits (185), Expect = 4e-17
Identities = 17/56 (30%), Positives = 23/56 (41%), Gaps = 1/56 (1%)
Query: 8 DDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLL 63
+ + L A G L+ + LLQ VNA N T L G+ +I R L
Sbjct: 2 AEPWGNELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQ-VMKLGNPEIARRL 56
Score = 42.8 bits (102), Expect = 2e-05
Identities = 8/32 (25%), Positives = 13/32 (40%)
Query: 4 VSVTDDHGFSPLHWACKEGHLKLVELLLQRGA 35
V + G + A G ++V L+ GA
Sbjct: 130 VGHRNHKGDTACDLARLYGRNEVVSLMQANGA 161
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit);
transcription factor, IKB/NFKB complex; 2.30A {Homo
sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Length = 236
Score = 83.4 bits (207), Expect = 1e-19
Identities = 18/77 (23%), Positives = 32/77 (41%), Gaps = 2/77 (2%)
Query: 4 VSVTDDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLL 63
++ ++ +PLH A ++ E LL G + +TPLHLA G L V +L
Sbjct: 38 LNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDPELRDFRGNTPLHLACEQGCLASVGVL 97
Query: 64 --AVQNNQDLTKINFKD 78
+ + + +
Sbjct: 98 TQSCTTPHLHSILKATN 114
Score = 80.7 bits (200), Expect = 1e-18
Identities = 30/82 (36%), Positives = 41/82 (50%), Gaps = 10/82 (12%)
Query: 4 VSVTDDHGFSPLHWACKEGHLKLVELLLQRGA------RVNATNRGDDTPLHLAAAHGHL 57
+ D G +PLH AC++G L V +L Q + ATN T LHLA+ HG+L
Sbjct: 71 PELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYL 130
Query: 58 DIVRLLAVQNNQDLTKINFKDQ 79
IV LL V D +N ++
Sbjct: 131 GIVELL-VSLGAD---VNAQEP 148
Score = 80.3 bits (199), Expect = 2e-18
Identities = 17/57 (29%), Positives = 23/57 (40%)
Query: 7 TDDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLL 63
+G + LH A + LV LLL+ GA VN +P L I + L
Sbjct: 147 EPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQLTWGRPSTRIQQQL 203
Score = 79.9 bits (198), Expect = 2e-18
Identities = 25/61 (40%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 4 VSVTDDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGD-DTPLHLAAAHGHLDIVRL 62
+ T+ +G + LH A G+L +VELL+ GA VNA + T LHLA + D+V L
Sbjct: 110 LKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSL 169
Query: 63 L 63
L
Sbjct: 170 L 170
Score = 76.0 bits (188), Expect = 6e-17
Identities = 16/60 (26%), Positives = 24/60 (40%), Gaps = 4/60 (6%)
Query: 8 DDHGFSPLHWACKEGH----LKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLL 63
+ G S LH A ++++ + A +N N TPLHLA +I L
Sbjct: 5 TEDGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEAL 64
Score = 61.4 bits (150), Expect = 1e-11
Identities = 6/57 (10%), Positives = 13/57 (22%)
Query: 4 VSVTDDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIV 60
V+ G+SP ++ + L Q + +
Sbjct: 177 VNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLENLQMLPESEDEESYDTESEFTEFT 233
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats,
A-helical domain, structural genomics, NPPSFA; 2.20A
{Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A
1ixv_A 1wg0_A
Length = 228
Score = 82.9 bits (206), Expect = 2e-19
Identities = 19/75 (25%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
Query: 4 VSVTDDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLL 63
++ + G + LH A + ++ + L++ GA V ++ + PLH AA+ G L ++ LL
Sbjct: 100 LNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELL 159
Query: 64 AVQNNQDLTKINFKD 78
+N++D
Sbjct: 160 CGLGKSA---VNWQD 171
Score = 82.1 bits (204), Expect = 3e-19
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 8 DDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDD---TPLHLAAAHGHLDIVRLL 63
D G PLHW+ ++ LL + VN + DD TP H+A + G+L++V+ L
Sbjct: 33 DQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACSVGNLEVVKSL 91
Score = 78.6 bits (195), Expect = 5e-18
Identities = 26/61 (42%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Query: 4 VSVTDDHGFSPLHWACKEGHLKLVELLLQRG-ARVNATNRGDDTPLHLAAAHGHLDIVRL 62
V + D PLH A G LKL+ELL G + VN ++ TPL A A GH D L
Sbjct: 133 VRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVL 192
Query: 63 L 63
L
Sbjct: 193 L 193
Score = 75.9 bits (188), Expect = 6e-17
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 2/59 (3%)
Query: 7 TDDHGFSPLHWACKEGHLKLVELLLQR--GARVNATNRGDDTPLHLAAAHGHLDIVRLL 63
DD G++P H AC G+L++V+ L R +N T LHLA ++ + L
Sbjct: 68 PDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFL 126
Score = 75.2 bits (186), Expect = 1e-16
Identities = 15/54 (27%), Positives = 23/54 (42%), Gaps = 1/54 (1%)
Query: 11 GFSPLHWACKEGHLKLV-ELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLL 63
PLH AC E V ELL + + + ++ PLH + + +I L
Sbjct: 2 SNYPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFL 55
Score = 65.2 bits (160), Expect = 5e-13
Identities = 14/61 (22%), Positives = 25/61 (40%), Gaps = 4/61 (6%)
Query: 4 VSVTDDHGFSPLHWACKEGHLKLVELLL-QRGARVNATNRGDDTPLHLAAAHGHLDIVRL 62
V+ D G++PL A EGH LL+ + GA + + +A + + +
Sbjct: 167 VNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVAL---NEQVKKF 223
Query: 63 L 63
Sbjct: 224 F 224
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase
(M130), serine/threonine protein phosphatase PP1-beta
(OR delta) catalytic subunit; myosin phosphatase; HET:
PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Length = 299
Score = 84.1 bits (209), Expect = 2e-19
Identities = 19/56 (33%), Positives = 30/56 (53%)
Query: 8 DDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLL 63
G + LH A +G+ ++++LL+Q VN + TPLH AA G + R+L
Sbjct: 196 AKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRIL 251
Score = 83.3 bits (207), Expect = 3e-19
Identities = 21/68 (30%), Positives = 36/68 (52%)
Query: 4 VSVTDDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLL 63
++ D+ G+ PLH A G+L + E L+ +GA V A N DTPL +A ++++
Sbjct: 99 INQPDNEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNE 158
Query: 64 AVQNNQDL 71
+ D+
Sbjct: 159 VNRQGVDI 166
Score = 81.4 bits (202), Expect = 2e-18
Identities = 20/60 (33%), Positives = 35/60 (58%)
Query: 4 VSVTDDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLL 63
++ + G + LH AC + ++ +V+ L++ GA +N + PLH AA+ G+LDI L
Sbjct: 66 INYANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAASCGYLDIAEYL 125
Score = 76.0 bits (188), Expect = 2e-16
Identities = 21/60 (35%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Query: 4 VSVTDDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLL 63
V D G + AC G + V LL+RGA +N N T LH A ++D+V+ L
Sbjct: 34 TKVKFDDG-AVFLAACSSGDTEEVLRLLERGADINYANVDGLTALHQACIDDNVDMVKFL 92
Score = 73.7 bits (182), Expect = 9e-16
Identities = 17/76 (22%), Positives = 31/76 (40%), Gaps = 4/76 (5%)
Query: 4 VSVTDDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLL 63
V++ D G++PLH A G + +L++ + A N+ T +A + L
Sbjct: 225 VNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAFDVADEDILGYLEELQ 284
Query: 64 AVQNNQDLTKINFKDQ 79
QN + K +
Sbjct: 285 KKQNL----LHSEKRE 296
Score = 69.5 bits (171), Expect = 3e-14
Identities = 16/77 (20%), Positives = 29/77 (37%), Gaps = 4/77 (5%)
Query: 2 YYVSVTDDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVR 61
V+ + + + L + T LH+AAA G+ ++++
Sbjct: 157 NEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLK 216
Query: 62 LLAVQNNQDLTKINFKD 78
LL +Q D +N KD
Sbjct: 217 LL-IQARYD---VNIKD 229
Score = 62.9 bits (154), Expect = 6e-12
Identities = 8/56 (14%), Positives = 14/56 (25%), Gaps = 1/56 (1%)
Query: 8 DDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLL 63
D G +E + + + D A + G + V L
Sbjct: 5 DAKQKRNEQLKRWIGSETDLEPPVVKRKKTKVKF-DDGAVFLAACSSGDTEEVLRL 59
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix,
ankyrin repeat, gene regulation/signalling protein/DNA
complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Length = 373
Score = 84.6 bits (210), Expect = 3e-19
Identities = 18/75 (24%), Positives = 33/75 (44%), Gaps = 1/75 (1%)
Query: 4 VSVTDDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLL 63
V+ D +PL A +LV L++ GA N+ + + LH AAA+ ++ +
Sbjct: 159 VNAMDCDENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSALHQAAANRDFGMMVYM 218
Query: 64 AVQNNQDLTKINFKD 78
+ + + I D
Sbjct: 219 -LNSTKLKGDIEELD 232
Score = 84.2 bits (209), Expect = 3e-19
Identities = 21/56 (37%), Positives = 34/56 (60%)
Query: 8 DDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLL 63
D+ G +P+ A +EG +++V L+Q+GA V A + D T LA A+ H +IV +
Sbjct: 310 DEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDATDHTARQLAQANNHHNIVDIF 365
Score = 79.2 bits (196), Expect = 2e-17
Identities = 15/57 (26%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 8 DDHGFSPLHWACKEGHLKLVELLL-QRGARVNATNRGDDTPLHLAAAHGHLDIVRLL 63
G + LH+A + ++ +V+ L+ ++G+ + + TP+ LAA G +++V L
Sbjct: 276 KYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYL 332
Score = 74.6 bits (184), Expect = 9e-16
Identities = 18/65 (27%), Positives = 25/65 (38%), Gaps = 8/65 (12%)
Query: 7 TDDHGFSPLHWACKEGHLKLVELLL--------QRGARVNATNRGDDTPLHLAAAHGHLD 58
H + LHW + E L+ GA VNA + ++TPL LA
Sbjct: 121 DPRHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAMDCDENTPLMLAVLARRRR 180
Query: 59 IVRLL 63
+V L
Sbjct: 181 LVAYL 185
Score = 74.2 bits (183), Expect = 1e-15
Identities = 12/79 (15%), Positives = 24/79 (30%), Gaps = 6/79 (7%)
Query: 4 VSVTDDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLL 63
+ + LH G + E + + + T LH A++ + L
Sbjct: 87 PTEPEPESPIKLHTEAA-GSYAITEPITRESVNIIDPRHNR-TVLHWIASNSSAEKSEDL 144
Query: 64 AVQNNQDLTK----INFKD 78
V ++ +N D
Sbjct: 145 IVHEAKECIAAGADVNAMD 163
Score = 69.2 bits (170), Expect = 6e-14
Identities = 13/85 (15%), Positives = 28/85 (32%), Gaps = 10/85 (11%)
Query: 4 VSVTDDHGFSPLHWACKEGHLKLVELLLQ---RGARVNATNRGDDTPLHLAAAHGHLD-- 58
++ + S LH A ++ +L + +R T L + A + D
Sbjct: 192 PTIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQV 251
Query: 59 -IVRLL----AVQNNQDLTKINFKD 78
+LL A + + + +
Sbjct: 252 ASAKLLVEKGAKVDYDGAARKDSEK 276
Score = 68.4 bits (168), Expect = 1e-13
Identities = 8/56 (14%), Positives = 12/56 (21%), Gaps = 1/56 (1%)
Query: 8 DDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLL 63
+ P G+ L + LH A G I +
Sbjct: 58 QHYSLYPNPQGYGNGNDFLGDFNHTNLQIPTEPEPESPIKLH-TEAAGSYAITEPI 112
Score = 67.7 bits (166), Expect = 2e-13
Identities = 17/82 (20%), Positives = 33/82 (40%), Gaps = 14/82 (17%)
Query: 8 DDHGFSPLHWACKEGH---LKLVELLLQRGARVNATNRGDD--------TPLHLAAAHGH 56
D +G + L + +LL+++GA+V+ T LH AA +
Sbjct: 232 DRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSN 291
Query: 57 LDIVRLLAVQNNQDLTKINFKD 78
+ IV+ L + + + +D
Sbjct: 292 MPIVKYLVGEKGSN---KDKQD 310
Score = 49.6 bits (119), Expect = 3e-07
Identities = 7/68 (10%), Positives = 16/68 (23%), Gaps = 13/68 (19%)
Query: 7 TDDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLL--- 63
+ L A +G++K N P +G+ +
Sbjct: 33 SITSSQHSLLEASYDGYIKRQR---------NELQHYSLYPNPQGYGNGNDFLGDFNHTN 83
Query: 64 -AVQNNQD 70
+ +
Sbjct: 84 LQIPTEPE 91
Score = 42.6 bits (101), Expect = 4e-05
Identities = 4/29 (13%), Positives = 9/29 (31%)
Query: 7 TDDHGFSPLHWACKEGHLKLVELLLQRGA 35
D + A H +V++ +
Sbjct: 342 VDATDHTARQLAQANNHHNIVDIFDRCRP 370
Score = 28.8 bits (65), Expect = 1.6
Identities = 4/32 (12%), Positives = 12/32 (37%)
Query: 32 QRGARVNATNRGDDTPLHLAAAHGHLDIVRLL 63
++ + + + L A+ G++ R
Sbjct: 25 EKNRKNHQSITSSQHSLLEASYDGYIKRQRNE 56
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system,
signal sequence, ankyrin repeat, chromodomain, type I
turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2
k.37.1.1 PDB: 3dep_A 1x32_A
Length = 183
Score = 80.6 bits (200), Expect = 4e-19
Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Query: 4 VSVTDDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGD-DTPLHLAAAHGHLDIVRL 62
V D++G + L + G K V LL + GA ++ + T LH+AA + ++V
Sbjct: 69 VDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVRPEVVEA 128
Query: 63 L 63
L
Sbjct: 129 L 129
Score = 77.2 bits (191), Expect = 8e-18
Identities = 13/71 (18%), Positives = 23/71 (32%), Gaps = 4/71 (5%)
Query: 8 DDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLL---- 63
G + LH A ++VE L++ GA + + T L LA
Sbjct: 107 MRGGLTALHMAAGYVRPEVVEALVELGADIEVEDERGLTALELAREILKTTPKGNPMQFG 166
Query: 64 AVQNNQDLTKI 74
+ + +
Sbjct: 167 RRIGLEKVINV 177
Score = 74.8 bits (185), Expect = 6e-17
Identities = 14/56 (25%), Positives = 22/56 (39%), Gaps = 1/56 (1%)
Query: 8 DDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLL 63
+P A ++ + + LL+ V+A + T L A G VRLL
Sbjct: 41 VSEYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLL 95
Score = 69.8 bits (172), Expect = 4e-15
Identities = 13/60 (21%), Positives = 17/60 (28%), Gaps = 3/60 (5%)
Query: 4 VSVTDDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLL 63
S T G K+GH A V + +TP AA + L
Sbjct: 7 GSRTAGEGAMEYLIEWKDGHSPSWVPSSYIAADVVSE---YETPWWTAARKADEQALSQL 63
Score = 49.4 bits (119), Expect = 9e-08
Identities = 9/60 (15%), Positives = 18/60 (30%), Gaps = 17/60 (28%)
Query: 4 VSVTDDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLL 63
+ V D+ G + L A + +Q G R+ ++ +L
Sbjct: 136 IEVEDERGLTALELAREILKTTPKGNPMQFGRRIG-----------------LEKVINVL 178
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein,
human epidermal growth factor receptor 2, de novo
protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G
2v4h_C
Length = 136
Score = 79.4 bits (197), Expect = 4e-19
Identities = 29/56 (51%), Positives = 40/56 (71%)
Query: 8 DDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLL 63
D++G +PL+ A GHL++VE+LL+ GA VNA + TPLHLAA GHL+I +L
Sbjct: 44 DEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGFTPLHLAAFIGHLEIAEVL 99
Score = 77.4 bits (192), Expect = 2e-18
Identities = 22/56 (39%), Positives = 35/56 (62%)
Query: 8 DDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLL 63
D GF+PLH A GHL++ E+LL+ GA VNA ++ T ++ +G+ D+ +L
Sbjct: 77 DAIGFTPLHLAAFIGHLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNEDLAEIL 132
Score = 72.8 bits (180), Expect = 1e-16
Identities = 23/50 (46%), Positives = 30/50 (60%)
Query: 14 PLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLL 63
L A + G V +L+ GA VNA + TPL+LA AHGHL+IV +L
Sbjct: 17 KLLEAARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVL 66
Score = 39.7 bits (94), Expect = 1e-04
Identities = 12/33 (36%), Positives = 16/33 (48%), Gaps = 3/33 (9%)
Query: 33 RGARVNATNRGDD--TPLHLAAAHGHLDIVRLL 63
RG+ + + G D L AA G D VR+L
Sbjct: 2 RGSHHHHHH-GSDLGKKLLEAARAGQDDEVRIL 33
Score = 36.6 bits (86), Expect = 0.002
Identities = 6/24 (25%), Positives = 10/24 (41%)
Query: 8 DDHGFSPLHWACKEGHLKLVELLL 31
D G + + G+ L E+L
Sbjct: 110 DKFGKTAFDISIGNGNEDLAEILQ 133
>2etb_A Transient receptor potential cation channel subfamily V member 2;
TRPV2, ankyrin repeat domain, transport protein; 1.65A
{Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Length = 256
Score = 82.1 bits (203), Expect = 4e-19
Identities = 23/84 (27%), Positives = 34/84 (40%), Gaps = 14/84 (16%)
Query: 8 DDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDD-------------TPLHLAAAH 54
G S LH A ++ L+ V+LL++ GA V+ G PL LAA
Sbjct: 87 FYQGHSALHIAIEKRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACT 146
Query: 55 GHLDIVRLLAVQNNQDLTKINFKD 78
D+V L ++N + D
Sbjct: 147 KQWDVVTYL-LENPHQPASLEATD 169
Score = 75.2 bits (185), Expect = 2e-16
Identities = 15/56 (26%), Positives = 23/56 (41%)
Query: 8 DDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLL 63
+ S L +G L++ L +N TPL LAA G ++I R +
Sbjct: 185 NSPENSALVIHMYDGLLQMGARLCPTVQLEEISNHQGLTPLKLAAKEGKIEIFRHI 240
Score = 59.4 bits (144), Expect = 7e-11
Identities = 20/93 (21%), Positives = 28/93 (30%), Gaps = 26/93 (27%)
Query: 6 VTDDHGFSPLHWACKEGHLKLVELLLQRG---ARVNATNRGDDTPLHLAAAH-------- 54
G PL A +V LL+ A + AT+ +T LH
Sbjct: 131 TCFYFGELPLSLAACTKQWDVVTYLLENPHQPASLEATDSLGNTVLHALVMIADNSPENS 190
Query: 55 --------GHLDIVRLL-------AVQNNQDLT 72
G L + L + N+Q LT
Sbjct: 191 ALVIHMYDGLLQMGARLCPTVQLEEISNHQGLT 223
Score = 58.3 bits (141), Expect = 2e-10
Identities = 15/70 (21%), Positives = 23/70 (32%), Gaps = 14/70 (20%)
Query: 8 DDHGFSPLHWA---CKEGHLKLVELLLQRG-----------ARVNATNRGDDTPLHLAAA 53
G + L A ++G + LLQ A+ + LH+A
Sbjct: 40 GSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVNAQCTDEFYQGHSALHIAIE 99
Query: 54 HGHLDIVRLL 63
L V+LL
Sbjct: 100 KRSLQCVKLL 109
Score = 53.3 bits (128), Expect = 1e-08
Identities = 11/42 (26%), Positives = 20/42 (47%)
Query: 4 VSVTDDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDD 45
+++ G +PL A KEG +++ +LQR A +
Sbjct: 214 EEISNHQGLTPLKLAAKEGKIEIFRHILQREFSGAAAHHHHH 255
Score = 39.8 bits (93), Expect = 3e-04
Identities = 9/61 (14%), Positives = 14/61 (22%), Gaps = 11/61 (18%)
Query: 14 PLHWACKEGHLKLVELLLQ--------RGARVNATNRGDDTPLHLAAAH---GHLDIVRL 62
L G + + LL+ T L A + G +
Sbjct: 5 RLFSVVSRGVPEELTGLLEYLRWNSKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMP 64
Query: 63 L 63
L
Sbjct: 65 L 65
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor,
cytoplasm, phosphorylation, P53 binding protein, ANK
repeat, SH3 domain; 2.10A {Homo sapiens}
Length = 229
Score = 81.5 bits (202), Expect = 4e-19
Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 1/75 (1%)
Query: 4 VSVTDDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLL 63
S ++ G + LH A + +V+ L+ GA VN+ + TPLH AA+ I L
Sbjct: 47 PSQPNEEGITALHNAICGANYSIVDFLITAGANVNSPDSHGWTPLHCAASCNDTVICMAL 106
Query: 64 AVQNNQDLTKINFKD 78
VQ+ + D
Sbjct: 107 -VQHGAAIFATTLSD 120
Score = 74.2 bits (183), Expect = 3e-16
Identities = 13/53 (24%), Positives = 20/53 (37%)
Query: 11 GFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLL 63
L A G L++V+ ++ + N T LH A + IV L
Sbjct: 21 PLVLLLDAALTGELEVVQQAVKEMNDPSQPNEEGITALHNAICGANYSIVDFL 73
Score = 56.1 bits (136), Expect = 8e-10
Identities = 13/59 (22%), Positives = 17/59 (28%), Gaps = 5/59 (8%)
Query: 4 VSVTDDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDD--TPLHLAAAHGHLDIV 60
+ + + L E EL + G V R T AA HG V
Sbjct: 149 MGLMNSGAVYALWDYSAEFGD---ELSFREGESVTVLRRDGPEETDWWWAALHGQEGYV 204
Score = 56.1 bits (136), Expect = 8e-10
Identities = 12/75 (16%), Positives = 22/75 (29%), Gaps = 7/75 (9%)
Query: 6 VTDDHGFSPLHWA--CKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLL 63
T G + +EG+ L + N G L +A D +
Sbjct: 116 TTLSDGATAFEKCDPYREGYADCATYLADVEQSMGLMNSGAVYALWDYSA-EFGDELSFR 174
Query: 64 AVQNNQDLTKINFKD 78
+ +T + +D
Sbjct: 175 ---EGESVT-VLRRD 185
Score = 49.6 bits (119), Expect = 1e-07
Identities = 9/40 (22%), Positives = 16/40 (40%), Gaps = 3/40 (7%)
Query: 27 VELLLQRGARVNATNRGDDTP---LHLAAAHGHLDIVRLL 63
+ +L++ R P L AA G L++V+
Sbjct: 1 MRSVLRKAGSPRKARRARLNPLVLLLDAALTGELEVVQQA 40
Score = 38.8 bits (91), Expect = 7e-04
Identities = 8/43 (18%), Positives = 9/43 (20%), Gaps = 1/43 (2%)
Query: 8 DDHGFSPLHWACKEGHLKLVE-LLLQRGARVNATNRGDDTPLH 49
D + WA G V RV H
Sbjct: 185 DGPEETDWWWAALHGQEGYVPRNYFGLFPRVKPQRSKVKHHHH 227
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell
cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A
2f8x_K 3nbn_B 3v79_K* 1ot8_A
Length = 253
Score = 82.1 bits (204), Expect = 5e-19
Identities = 19/60 (31%), Positives = 30/60 (50%)
Query: 4 VSVTDDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLL 63
+ ++ +PL A +EG + ++LL A + T+ D P +A H DIVRLL
Sbjct: 183 KDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLL 242
Score = 80.6 bits (200), Expect = 2e-18
Identities = 21/57 (36%), Positives = 31/57 (54%)
Query: 7 TDDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLL 63
DD G S LHWA ++ +LL+ GA + N ++TPL LAA G + ++L
Sbjct: 153 VDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVL 209
Score = 79.8 bits (198), Expect = 3e-18
Identities = 17/72 (23%), Positives = 29/72 (40%), Gaps = 3/72 (4%)
Query: 7 TDDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLLAVQ 66
TD G + LH A + + LL+ A N + TPLH A + + ++L
Sbjct: 53 TDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRN 112
Query: 67 NNQDLTKINFKD 78
D ++ +
Sbjct: 113 RATD---LDARM 121
Score = 78.7 bits (195), Expect = 8e-18
Identities = 17/56 (30%), Positives = 27/56 (48%)
Query: 8 DDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLL 63
G +PL A + ++E L+ A VNA + + LH AAA ++D +L
Sbjct: 121 MHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVL 176
Score = 71.7 bits (177), Expect = 2e-15
Identities = 16/61 (26%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Query: 4 VSVTDDHGFSPLHWACKEGHLKLVELLLQRGAR-VNATNRGDDTPLHLAAAHGHLDIVRL 62
++ D+ G +PLH A + ++L++ A ++A TPL LAA ++
Sbjct: 83 ANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLED 142
Query: 63 L 63
L
Sbjct: 143 L 143
Score = 66.3 bits (163), Expect = 3e-13
Identities = 21/74 (28%), Positives = 33/74 (44%), Gaps = 14/74 (18%)
Query: 4 VSVTDDHGFSPLHWAC-------------KEGHLKLVELLLQRGARV-NATNRGDDTPLH 49
V+V GF+PL A +E ++ + +GA + N T+R +T LH
Sbjct: 3 VNVRGPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHNQTDRTGETALH 62
Query: 50 LAAAHGHLDIVRLL 63
LAA + D + L
Sbjct: 63 LAARYSRSDAAKRL 76
Score = 40.5 bits (96), Expect = 2e-04
Identities = 8/35 (22%), Positives = 12/35 (34%)
Query: 7 TDDHGFSPLHWACKEGHLKLVELLLQRGARVNATN 41
TD P A + H +V LL + +
Sbjct: 219 TDHMDRLPRDIAQERMHHDIVRLLDLEHHHHHHHH 253
Score = 33.6 bits (78), Expect = 0.039
Identities = 7/32 (21%), Positives = 11/32 (34%)
Query: 37 VNATNRGDDTPLHLAAAHGHLDIVRLLAVQNN 68
VN TPL +A+ G + +
Sbjct: 3 VNVRGPDGFTPLMIASCSGGGLETGNSEEEED 34
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin
repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A
1ymp_A
Length = 223
Score = 81.3 bits (202), Expect = 5e-19
Identities = 22/60 (36%), Positives = 33/60 (55%)
Query: 4 VSVTDDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLL 63
V+ DD G S LHWA ++ +LL+ GA + N ++TPL LAA G + ++L
Sbjct: 118 VNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVL 177
Score = 80.9 bits (201), Expect = 7e-19
Identities = 19/56 (33%), Positives = 29/56 (51%)
Query: 8 DDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLL 63
++ +PL A +EG + ++LL A + T+ D P +A H DIVRLL
Sbjct: 155 NNREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLL 210
Score = 79.8 bits (198), Expect = 2e-18
Identities = 16/57 (28%), Positives = 25/57 (43%)
Query: 7 TDDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLL 63
TD G + LH A + + LL+ A N + TPLH A + + ++L
Sbjct: 21 TDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQIL 77
Score = 78.2 bits (194), Expect = 8e-18
Identities = 17/60 (28%), Positives = 28/60 (46%)
Query: 4 VSVTDDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLL 63
+ G +PL A + ++E L+ A VNA + + LH AAA ++D +L
Sbjct: 85 LDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVL 144
Score = 74.8 bits (185), Expect = 1e-16
Identities = 19/76 (25%), Positives = 36/76 (47%), Gaps = 5/76 (6%)
Query: 4 VSVTDDHGFSPLHWACKEGHLKLVELLLQRGAR-VNATNRGDDTPLHLAAAHGHLDIVRL 62
++ D+ G +PLH A + ++L++ A ++A TPL LAA ++
Sbjct: 51 ANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLED 110
Query: 63 LAVQNNQDLTKINFKD 78
L + ++ D +N D
Sbjct: 111 L-INSHAD---VNAVD 122
Score = 54.7 bits (133), Expect = 2e-09
Identities = 16/58 (27%), Positives = 29/58 (50%), Gaps = 5/58 (8%)
Query: 22 GHLKLVELLLQRGARV-NATNRGDDTPLHLAAAHGHLDIVRLLAVQNNQDLTKINFKD 78
++ + +GA + N T+R +T LHLAA + D + L ++ + D N +D
Sbjct: 2 DAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRL-LEASAD---ANIQD 55
Score = 44.3 bits (106), Expect = 9e-06
Identities = 10/43 (23%), Positives = 14/43 (32%), Gaps = 7/43 (16%)
Query: 7 TDDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLH 49
TD P A + H +V LL + + LH
Sbjct: 187 TDHMDRLPRDIAQERMHHDIVRLLDEYNLVRS-------PQLH 222
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1,
ankyrin repeat domain, transport protein; HET: ATP;
2.70A {Rattus norvegicus} PDB: 2nyj_A*
Length = 273
Score = 82.1 bits (203), Expect = 7e-19
Identities = 27/85 (31%), Positives = 39/85 (45%), Gaps = 15/85 (17%)
Query: 8 DDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGD--------------DTPLHLAAA 53
G + LH A + ++ LV LL++ GA V A GD + PL LAA
Sbjct: 98 YYKGQTALHIAIERRNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAAC 157
Query: 54 HGHLDIVRLLAVQNNQDLTKINFKD 78
L IV+ L +QN+ I+ +D
Sbjct: 158 TNQLAIVKFL-LQNSWQPADISARD 181
Score = 69.0 bits (169), Expect = 3e-14
Identities = 14/55 (25%), Positives = 21/55 (38%), Gaps = 7/55 (12%)
Query: 4 VSVTDDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLD 58
+T+ G +PL A G + ++ +LQR H AA H H
Sbjct: 226 EEITNRKGLTPLALAASSGKIGVLAYILQREIHEP-------ECRHAAAHHHHHH 273
Score = 62.5 bits (152), Expect = 7e-12
Identities = 17/70 (24%), Positives = 26/70 (37%), Gaps = 14/70 (20%)
Query: 8 DDHGFSPLHWA---CKEGHLKLVELLLQRGAR-------VNATNRGDD----TPLHLAAA 53
+ G + L A G + LLL + VNA+ T LH+A
Sbjct: 51 PETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSLKQFVNASYTDSYYKGQTALHIAIE 110
Query: 54 HGHLDIVRLL 63
++ +V LL
Sbjct: 111 RRNMTLVTLL 120
Score = 61.7 bits (150), Expect = 2e-11
Identities = 15/67 (22%), Positives = 24/67 (35%), Gaps = 3/67 (4%)
Query: 8 DDHGFSPLHWACKEGHLKLVELLLQRG---ARVNATNRGDDTPLHLAAAHGHLDIVRLLA 64
G PL A L +V+ LLQ A ++A + +T LH +
Sbjct: 145 FYFGELPLSLAACTNQLAIVKFLLQNSWQPADISARDSVGNTVLHALVEVADNTVDNTKF 204
Query: 65 VQNNQDL 71
V + +
Sbjct: 205 VTSMYNE 211
Score = 60.6 bits (147), Expect = 3e-11
Identities = 18/76 (23%), Positives = 31/76 (40%), Gaps = 16/76 (21%)
Query: 4 VSVTDDHGFSPLHWACKEGHL---------KLVELLLQRGARVN-------ATNRGDDTP 47
+S D G + LH + + +L GA+++ TNR TP
Sbjct: 177 ISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEEITNRKGLTP 236
Query: 48 LHLAAAHGHLDIVRLL 63
L LAA+ G + ++ +
Sbjct: 237 LALAASSGKIGVLAYI 252
Score = 50.9 bits (122), Expect = 7e-08
Identities = 12/67 (17%), Positives = 21/67 (31%), Gaps = 11/67 (16%)
Query: 8 DDHGFSPLHWACKEGHLKLVELLLQ-------RGARVNATNRGD-DTPLHLAAAH---GH 56
+ + A + + + +E LL R + T L A + G
Sbjct: 10 RLYDRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQ 69
Query: 57 LDIVRLL 63
D + LL
Sbjct: 70 NDTIALL 76
Score = 35.1 bits (81), Expect = 0.013
Identities = 10/48 (20%), Positives = 16/48 (33%), Gaps = 3/48 (6%)
Query: 34 GARVNATNRGDDTPLHLAAAHGHLDIVRLL---AVQNNQDLTKINFKD 78
A D + A A + + L ++ + LT FKD
Sbjct: 3 SAGEKPPRLYDRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKD 50
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein
binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Length = 192
Score = 80.1 bits (199), Expect = 9e-19
Identities = 13/56 (23%), Positives = 23/56 (41%)
Query: 8 DDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLL 63
D + +PL AC G ++ L++ ++ + T L A + L I L
Sbjct: 32 DSYNRTPLMVACMLGMENAIDKLVENFDKLEDKDIEGSTALIWAVKNNRLGIAEKL 87
Score = 80.1 bits (199), Expect = 9e-19
Identities = 21/56 (37%), Positives = 33/56 (58%)
Query: 8 DDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLL 63
D G +PL W+ G+ ++ LL+ GA VN N +TPL +A+ +G +IV+ L
Sbjct: 98 DFSGKTPLMWSIIFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRSEIVKKL 153
Score = 79.7 bits (198), Expect = 1e-18
Identities = 18/56 (32%), Positives = 27/56 (48%)
Query: 8 DDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLL 63
D G + L WA K L + E LL +G+ VN + TPL + G+ ++ L
Sbjct: 65 DIEGSTALIWAVKNNRLGIAEKLLSKGSNVNTKDFSGKTPLMWSIIFGYSEMSYFL 120
Score = 76.7 bits (190), Expect = 1e-17
Identities = 15/56 (26%), Positives = 29/56 (51%)
Query: 8 DDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLL 63
+ G +PL A K G ++V+ LL+ GA ++A + T A G +++++
Sbjct: 131 NLEGETPLIVASKYGRSEIVKKLLELGADISARDLTGLTAEASARIFGRQEVIKIF 186
Score = 57.0 bits (139), Expect = 2e-10
Identities = 10/56 (17%), Positives = 21/56 (37%), Gaps = 6/56 (10%)
Query: 8 DDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLL 63
D +G ++ + ++ L N + + TPL +A G + + L
Sbjct: 5 DKNGEIVEKIKDEKSINQNLDFL------RNYRDSYNRTPLMVACMLGMENAIDKL 54
Score = 37.8 bits (89), Expect = 0.001
Identities = 4/24 (16%), Positives = 10/24 (41%)
Query: 8 DDHGFSPLHWACKEGHLKLVELLL 31
D G + A G +++++
Sbjct: 164 DLTGLTAEASARIFGRQEVIKIFT 187
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat,
chromodomain, aromatic CAGE, signal recognit particle,
protein targeting; 3.18A {Arabidopsis thaliana} PDB:
1x3q_A 2hug_A
Length = 244
Score = 80.3 bits (199), Expect = 2e-18
Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Query: 4 VSVTDDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGD-DTPLHLAAAHGHLDIVRL 62
V D++G + L + G K V LL + GA ++ + T LH+AA + ++V
Sbjct: 70 VDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVRPEVVEA 129
Query: 63 L 63
L
Sbjct: 130 L 130
Score = 78.8 bits (195), Expect = 7e-18
Identities = 13/71 (18%), Positives = 23/71 (32%), Gaps = 4/71 (5%)
Query: 8 DDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLL---- 63
G + LH A ++VE L++ GA + + T L LA
Sbjct: 108 MRGGLTALHMAAGYVRPEVVEALVELGADIEVEDERGLTALELAREILKTTPKGNPMQFG 167
Query: 64 AVQNNQDLTKI 74
+ + +
Sbjct: 168 RRIGLEKVINV 178
Score = 74.2 bits (183), Expect = 4e-16
Identities = 14/56 (25%), Positives = 22/56 (39%), Gaps = 1/56 (1%)
Query: 8 DDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLL 63
+P A ++ + + LL+ V+A + T L A G VRLL
Sbjct: 42 VSEYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLL 96
Score = 68.4 bits (168), Expect = 4e-14
Identities = 13/59 (22%), Positives = 16/59 (27%), Gaps = 3/59 (5%)
Query: 5 SVTDDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLL 63
S T G K+GH A V + TP AA + L
Sbjct: 9 SRTAGEGAMEYLIEWKDGHSPSWVPSSYIAADVVSEYE---TPWWTAARKADEQALSQL 64
Score = 63.8 bits (156), Expect = 2e-12
Identities = 8/65 (12%), Positives = 21/65 (32%), Gaps = 3/65 (4%)
Query: 4 VSVTDDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLL 63
+ V D+ G + L A + +Q G R+ + + ++ ++
Sbjct: 137 IEVEDERGLTALELAREILKTTPKGNPMQFGRRIGLE---KVINVLEGQVFEYAEVDEIV 193
Query: 64 AVQNN 68
+
Sbjct: 194 EKRGK 198
Score = 49.1 bits (118), Expect = 2e-07
Identities = 6/50 (12%), Positives = 12/50 (24%), Gaps = 2/50 (4%)
Query: 8 DDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHL 57
G + + + A A + + L A A +
Sbjct: 196 RGKGKDVEYLVRWKDGGDCEWVKGVHVAEDVAKD--YEDGLEYAVAESVI 243
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6
ATPase, P-benzoyl-L-phenylalanine, PBPA, amber
suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A
2dwz_A* 1tr4_A 1uoh_A 1qym_A
Length = 231
Score = 78.8 bits (194), Expect = 6e-18
Identities = 28/85 (32%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Query: 4 VSVTDDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLL 63
+ TD + LHWAC GH ++VE LLQ G VN + +PLH+AA+ G +IV+ L
Sbjct: 33 ATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGXDEIVKAL 92
Query: 64 AVQNNQDLTKINFKDQSWLGLKTRS 88
+ + +N + L
Sbjct: 93 -LVKGAHVNAVNQNGCTPLHYAASK 116
Score = 71.8 bits (176), Expect = 2e-15
Identities = 14/53 (26%), Positives = 22/53 (41%)
Query: 11 GFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLL 63
+ A +L E +L + T++ T LH A + GH +IV L
Sbjct: 7 NIMICNLAYSGKLDELKERILADKSLATRTDQDSRTALHWACSAGHTEIVEFL 59
Score = 61.0 bits (148), Expect = 2e-11
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
Query: 4 VSVTDDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLL 63
V+ DD G+SPLH A G ++V+ LL +GA VNA N+ TPLH AA+ +I +L
Sbjct: 66 VNDKDDAGWSPLHIAASAGXDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVML 125
Query: 64 AVQNNQDLTKINFKDQSWLGLKTRS 88
++ + + D + +
Sbjct: 126 -LEGGANPDAKDHYDATAMHRAAAK 149
Score = 59.9 bits (145), Expect = 4e-11
Identities = 18/60 (30%), Positives = 30/60 (50%)
Query: 4 VSVTDDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLL 63
D + + +H A +G+LK+V +LL A N + +TPLHLA ++ + L
Sbjct: 132 PDAKDHYDATAMHRAAAKGNLKMVHILLFYKASTNIQDTEGNTPLHLACDEERVEEAKFL 191
Score = 59.5 bits (144), Expect = 6e-11
Identities = 21/60 (35%), Positives = 37/60 (61%)
Query: 4 VSVTDDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLL 63
V+ + +G +PLH+A + ++ +LL+ GA +A + D T +H AAA G+L +V +L
Sbjct: 99 VNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMVHIL 158
Score = 59.1 bits (143), Expect = 7e-11
Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Query: 4 VSVTDDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLL 63
++ D G +PLH AC E ++ + L+ +GA + N+ + TPL +A G L ++
Sbjct: 165 TNIQDTEGNTPLHLACDEERVEEAKFLVTQGASIYIENKEEKTPLQVAK--GGLGLILKR 222
Score = 37.2 bits (86), Expect = 0.002
Identities = 8/35 (22%), Positives = 15/35 (42%), Gaps = 2/35 (5%)
Query: 4 VSVTDDHGFSPLHWACKEGHLKLVELLLQRGARVN 38
+ + + +PL A +G L L+ L G +
Sbjct: 198 IYIENKEEKTPLQVA--KGGLGLILKRLAEGEEAS 230
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics,
PSI, protein structure initiative; 2.80A {Legionella
pneumophila} SCOP: a.118.24.1
Length = 376
Score = 80.4 bits (198), Expect = 7e-18
Identities = 14/78 (17%), Positives = 26/78 (33%), Gaps = 3/78 (3%)
Query: 4 VSVTDDHGFSPLHWACKEGHLKLVELLLQRGARVNATN--RGDDTPLHLAAAHGHLDIVR 61
V V + A + GHL ++ L + + LAA +GHL ++
Sbjct: 121 VKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAENYHAFRLAAENGHLHVLN 180
Query: 62 LLAVQNNQDLTKINFKDQ 79
L + + +
Sbjct: 181 RL-CELAPTEATAMIQAE 197
Score = 66.9 bits (163), Expect = 3e-13
Identities = 10/61 (16%), Positives = 19/61 (31%), Gaps = 3/61 (4%)
Query: 4 VSVTDDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLL 63
+ L A + G+ LLL + + T ++ G LD+ +
Sbjct: 312 TATIPGDANELLRLALRLGNQGACALLLSIPSVLALT---KANNYYINETGGRLDLRAVA 368
Query: 64 A 64
Sbjct: 369 L 369
Score = 66.9 bits (163), Expect = 4e-13
Identities = 10/59 (16%), Positives = 19/59 (32%), Gaps = 3/59 (5%)
Query: 8 DDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRG--DDTPLHLAAA-HGHLDIVRLL 63
+ A + GHL ++ L + + AA GH +++ L
Sbjct: 160 QAENYHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFL 218
Score = 63.4 bits (154), Expect = 6e-12
Identities = 14/75 (18%), Positives = 26/75 (34%), Gaps = 2/75 (2%)
Query: 7 TDDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLLAVQ 66
++ F C L + LLL V + LAA +GHL ++ L +
Sbjct: 92 SEVICFVAAITGC-SSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRL-CE 149
Query: 67 NNQDLTKINFKDQSW 81
+ +++
Sbjct: 150 LAPTEIMAMIQAENY 164
Score = 60.0 bits (145), Expect = 8e-11
Identities = 15/78 (19%), Positives = 26/78 (33%), Gaps = 9/78 (11%)
Query: 7 TDDHGFSPLHWACKEGHLKLVELL--------LQRGARVNATNRGDDTPLHLAAAHGHLD 58
GF L + L++ + ++ A + L LA G+
Sbjct: 274 ECLQGFYMLRNLIRRNDEVLLDDIRFLLSIPGIKALAPTATIPGDANELLRLALRLGNQG 333
Query: 59 IVR-LLAVQNNQDLTKIN 75
LL++ + LTK N
Sbjct: 334 ACALLLSIPSVLALTKAN 351
Score = 49.9 bits (119), Expect = 2e-07
Identities = 9/63 (14%), Positives = 16/63 (25%), Gaps = 8/63 (12%)
Query: 7 TDDHGFSPLHWACKE-GHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLLAV 65
+ WA GH ++ LL + +G + +A
Sbjct: 194 IQAENYYAFRWAAVGRGHHNVINFLLDCPVMLAYAEI-------HEFEYGEKYVNPFIAR 246
Query: 66 QNN 68
N
Sbjct: 247 HVN 249
Score = 36.8 bits (85), Expect = 0.004
Identities = 6/45 (13%), Positives = 14/45 (31%), Gaps = 4/45 (8%)
Query: 16 HWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIV 60
+ G + + + R+ + L+ G D+V
Sbjct: 230 IHEFEYGEKYVNPFIARHVNRLKEMH----DAFKLSNPDGVFDLV 270
Score = 28.4 bits (63), Expect = 2.0
Identities = 5/35 (14%), Positives = 14/35 (40%), Gaps = 3/35 (8%)
Query: 4 VSVTDDHGFSPLHWACKEGHLKLVELLLQRGARVN 38
+++T + + + G L L + L+ +
Sbjct: 345 LALTKANNY---YINETGGRLDLRAVALEHHHHHH 376
Score = 28.4 bits (63), Expect = 2.3
Identities = 10/57 (17%), Positives = 22/57 (38%), Gaps = 11/57 (19%)
Query: 22 GHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGH---LDIVRLLAVQNNQDLTKIN 75
+L ++G + + +AA G LD + LL + +++ + I
Sbjct: 77 NAKQLWSDAHKKGIK-------SEVICFVAAITGCSSALDTLCLL-LTSDEIVKVIQ 125
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK,
signal transduction, SH2, SH3, SRC homology, tyrosine
kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1
d.93.1.1 d.144.1.7 PDB: 1jeg_A
Length = 450
Score = 80.1 bits (198), Expect = 1e-17
Identities = 32/123 (26%), Positives = 56/123 (45%), Gaps = 7/123 (5%)
Query: 99 ISLNDLSLHTKISSGPNGDTWRGRWQKNDIVA-KILAVRNCTPRVSRDFNEEFPKLRIFS 157
+++ +L L I G GD G + + + VA K + + T + F E +
Sbjct: 190 LNMKELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIK-NDATAQ---AFLAEASVMTQLR 244
Query: 158 HPNVLPVIG-CVNSPPDLVVISQYMAWGSLYALLHEGAGIVVDFAQALRFAVDVARGMAF 216
H N++ ++G V L ++++YMA GSL L V+ L+F++DV M +
Sbjct: 245 HSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEY 304
Query: 217 LHS 219
L
Sbjct: 305 LEG 307
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin
repeats, ANK repeat, ION transport, ionic channel, R
transmembrane, transport; 2.30A {Gallus gallus} PDB:
3jxj_A
Length = 260
Score = 77.5 bits (191), Expect = 2e-17
Identities = 24/85 (28%), Positives = 34/85 (40%), Gaps = 15/85 (17%)
Query: 8 DDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGD--------------DTPLHLAAA 53
G + LH A + VELL+++GA V+A RG + PL LAA
Sbjct: 90 YYRGQTALHIAIERRCKHYVELLVEKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAAC 149
Query: 54 HGHLDIVRLLAVQNNQDLTKINFKD 78
IV L +N + +D
Sbjct: 150 TNQPHIVHYL-TENGHKQADLRRQD 173
Score = 56.3 bits (136), Expect = 8e-10
Identities = 15/76 (19%), Positives = 28/76 (36%), Gaps = 16/76 (21%)
Query: 4 VSVTDDHGFSPLHWACKEGH---------LKLVELLLQRGARVNATNRGDD-------TP 47
+ D G + LH K+ +LLL + A++ + +P
Sbjct: 169 LRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLNNDGLSP 228
Query: 48 LHLAAAHGHLDIVRLL 63
L +AA G + I + +
Sbjct: 229 LMMAAKTGKIGIFQHI 244
Score = 55.6 bits (134), Expect = 2e-09
Identities = 15/70 (21%), Positives = 22/70 (31%), Gaps = 14/70 (20%)
Query: 8 DDHGFSPLHWA---CKEGHLKLVELLLQRGAR-------VNATNRGDD----TPLHLAAA 53
G + L A G + +LL + +N+ R T LH+A
Sbjct: 43 PSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFINSPFRDVYYRGQTALHIAIE 102
Query: 54 HGHLDIVRLL 63
V LL
Sbjct: 103 RRCKHYVELL 112
Score = 54.8 bits (132), Expect = 3e-09
Identities = 16/84 (19%), Positives = 28/84 (33%), Gaps = 12/84 (14%)
Query: 12 FSPLHWACKEGHLKLVELLLQRGARVNATNRGDD----TPLHLAAAH---GHLDIVRLL- 63
F + +G L+ LL R+ + T L A + G D + +L
Sbjct: 10 FDIVSRGSPDGLEGLLSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILL 69
Query: 64 ----AVQNNQDLTKINFKDQSWLG 83
N ++ F+D + G
Sbjct: 70 DIAEKTGNMREFINSPFRDVYYRG 93
Score = 54.4 bits (131), Expect = 4e-09
Identities = 12/52 (23%), Positives = 17/52 (32%), Gaps = 3/52 (5%)
Query: 8 DDHGFSPLHWACKEGHLKLVELLLQRG---ARVNATNRGDDTPLHLAAAHGH 56
G PL A +V L + G A + + +T LH A
Sbjct: 137 FYFGELPLSLAACTNQPHIVHYLTENGHKQADLRRQDSRGNTVLHALVAIAD 188
Score = 49.4 bits (118), Expect = 2e-07
Identities = 10/45 (22%), Positives = 20/45 (44%), Gaps = 4/45 (8%)
Query: 5 SVTDDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLH 49
++ ++ G SPL A K G + + + +++R A H
Sbjct: 219 ALLNNDGLSPLMMAAKTGKIGIFQHIIRREIADAAA----HHHHH 259
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex,
DOWN-regulated kinase, ordered activation loop; HET: PTR
PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1
d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A*
3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Length = 454
Score = 79.4 bits (196), Expect = 3e-17
Identities = 37/177 (20%), Positives = 67/177 (37%), Gaps = 16/177 (9%)
Query: 53 AHGHLDIVRLLAVQNNQDLTKINFKDQSWLGLKTRSRDATLSRHKG---------ISLND 103
+G I Q+L ++ + GL + +S I
Sbjct: 132 DNGGFYISPRSTFSTLQEL--VDHYKKGNDGLCQKLSVPCMSSKPQKPWEKDAWEIPRES 189
Query: 104 LSLHTKISSGPNGDTWRGRWQKNDIVA-KILAVRNCTPRVSRDFNEEFPKLRIFSHPNVL 162
L L K+ +G G+ W + K+ VA K + + + F E ++ H ++
Sbjct: 190 LKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVE---AFLAEANVMKTLQHDKLV 246
Query: 163 PVIGCVNSPPDLVVISQYMAWGSLYALLHEGAGIVVDFAQALRFAVDVARGMAFLHS 219
+ V P + +I+++MA GSL L G + + F+ +A GMAF+
Sbjct: 247 KLHAVVTKEP-IYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQ 302
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase,
phosphorylation, staurosporine, transferase; HET: STU;
2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Length = 278
Score = 77.2 bits (191), Expect = 4e-17
Identities = 31/123 (25%), Positives = 55/123 (44%), Gaps = 7/123 (5%)
Query: 99 ISLNDLSLHTKISSGPNGDTWRGRWQKNDIVAKILAVRNCTPRVS-RDFNEEFPKLRIFS 157
+++ +L L I G GD G ++ N + AV+ + + F E +
Sbjct: 18 LNMKELKLLQTIGKGEFGDVMLGDYRGNKV-----AVKCIKNDATAQAFLAEASVMTQLR 72
Query: 158 HPNVLPVIG-CVNSPPDLVVISQYMAWGSLYALLHEGAGIVVDFAQALRFAVDVARGMAF 216
H N++ ++G V L ++++YMA GSL L V+ L+F++DV M +
Sbjct: 73 HSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEY 132
Query: 217 LHS 219
L
Sbjct: 133 LEG 135
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein
structure initiati midwest center F or structural
genomics, MCSG; 1.77A {Leptotrichia buccalis}
Length = 186
Score = 75.1 bits (185), Expect = 6e-17
Identities = 12/89 (13%), Positives = 31/89 (34%), Gaps = 15/89 (16%)
Query: 4 VSVTDDHGFSPLHWACKEGH------LKLVELLLQRGARVNATNRGDDTPLHLAAAHGHL 57
+ G + + G +L ++ L++GA + A + + + +
Sbjct: 68 IKSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKGADITALYKPYKIVVFKNIFNYFV 127
Query: 58 D------IVRLLAVQNNQDLTKINFKDQS 80
D + +L+ Q+ + KD+
Sbjct: 128 DENEMIPLYKLIFSQSGLQ---LLIKDKW 153
Score = 73.2 bits (180), Expect = 3e-16
Identities = 8/84 (9%), Positives = 23/84 (27%), Gaps = 11/84 (13%)
Query: 4 VSVTDDHGFSPLHWACKEGHLKLVE-------LLLQRGARVNATNRGDDTPLHLAAAHGH 56
++ + + E + Q G ++ ++ T L
Sbjct: 107 ITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDKWGLTALEFVKRCQK 166
Query: 57 LDIVRLLAVQNNQDLTKINFKDQS 80
++++ + N K+ S
Sbjct: 167 PIALKMM-EDYIKK---YNLKENS 186
Score = 72.0 bits (177), Expect = 7e-16
Identities = 10/58 (17%), Positives = 19/58 (32%)
Query: 8 DDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLLAV 65
+ + L E K+ L+ +GA + + + T G DI +
Sbjct: 39 SNILYDVLRNNNDEARYKISMFLINKGADIKSRTKEGTTLFFPLFQGGGNDITGTTEL 96
Score = 57.4 bits (139), Expect = 2e-10
Identities = 7/56 (12%), Positives = 14/56 (25%), Gaps = 3/56 (5%)
Query: 11 GFSPLHWACKEGHLKLVELLLQRGARVNATNRGDD---TPLHLAAAHGHLDIVRLL 63
+ + A G + L ++G + + L I L
Sbjct: 6 EYRTVSAAAMLGTYEDFLELFEKGYEDKESVLKSNILYDVLRNNNDEARYKISMFL 61
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase
domain, multitargeted small M kinase inhibitor; HET:
ITI; 2.70A {Homo sapiens}
Length = 327
Score = 75.7 bits (187), Expect = 2e-16
Identities = 25/135 (18%), Positives = 55/135 (40%), Gaps = 7/135 (5%)
Query: 90 DATLSRHKGISLNDLSLHTKISSGPNGDTWRGRWQKNDIVAKIL-AV----RNCTPRVSR 144
+ + + + + SG G ++G W KI A+ +P+ ++
Sbjct: 3 APNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK 62
Query: 145 DFNEEFPKLRIFSHPNVLPVIGCVNSPPDLVVISQYMAWGSLYALLHEGAGIVVDFAQAL 204
+ +E + +P+V ++G + + +I+Q M +G L + E + L
Sbjct: 63 EILDEAYVMASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKD-NIGSQYLL 120
Query: 205 RFAVDVARGMAFLHS 219
+ V +A+GM +L
Sbjct: 121 NWCVQIAKGMNYLED 135
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase,
phosphorylation, SH2, SH3, phosphotyrosine,
proto-oncogene, phosphotransferase; HET: PTR; 1.50A
{Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB:
1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B*
3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A*
3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Length = 452
Score = 76.7 bits (189), Expect = 2e-16
Identities = 35/157 (22%), Positives = 60/157 (38%), Gaps = 15/157 (9%)
Query: 74 INFKDQSWLGLKTRSRDATLSRHKG----------ISLNDLSLHTKISSGPNGDTWRGRW 123
+ + + GL R + I L L K+ G G+ W G W
Sbjct: 146 VAYYSKHADGLCHRLTTVCPTSKPQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTW 205
Query: 124 QKNDIVA-KILAVRNCTPRVSRDFNEEFPKLRIFSHPNVLPVIGCVNSPPDLVVISQYMA 182
VA K L +P F +E ++ H ++ + V+ P + ++++YM+
Sbjct: 206 NGTTRVAIKTLKPGTMSPE---AFLQEAQVMKKLRHEKLVQLYAVVSEEP-IYIVTEYMS 261
Query: 183 WGSLYALLHEGAGIVVDFAQALRFAVDVARGMAFLHS 219
GSL L G + Q + A +A GMA++
Sbjct: 262 KGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVER 298
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1;
transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP:
b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Length = 495
Score = 76.3 bits (188), Expect = 2e-16
Identities = 31/124 (25%), Positives = 57/124 (45%), Gaps = 7/124 (5%)
Query: 99 ISLNDLSLHTKISSGPNGDTWRGRWQKNDI-VA-KILAVRNCTPRVSRDFNEEFPKLRIF 156
+ D+++ K+ G G+ + G W+K + VA K L +F +E ++
Sbjct: 217 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE---EFLKEAAVMKEI 273
Query: 157 SHPNVLPVIG-CVNSPPDLVVISQYMAWGSLYALLHEGAGIVVDFAQALRFAVDVARGMA 215
HPN++ ++G C PP +I+++M +G+L L E V L A ++ M
Sbjct: 274 KHPNLVQLLGVCTREPP-FYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAME 332
Query: 216 FLHS 219
+L
Sbjct: 333 YLEK 336
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease
mutation, glycoprotein, nucleot binding,
phosphorylation, receptor; HET: ADP; 1.90A {Homo
sapiens} PDB: 3bpr_A* 2p0c_A*
Length = 313
Score = 75.4 bits (186), Expect = 3e-16
Identities = 38/135 (28%), Positives = 59/135 (43%), Gaps = 14/135 (10%)
Query: 99 ISLNDLSLHTKISSGPNGDTWRGRWQKND----IVA-KILAVRNCTPRVSRDFNEEFPKL 153
I N L L + G G G ++ D VA K + + N + R +F E +
Sbjct: 31 IDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACM 90
Query: 154 RIFSHPNVLPVIGCV-----NSPPDLVVISQYMAWGSLYALL----HEGAGIVVDFAQAL 204
+ FSHPNV+ ++G P +VI +M +G L+ L E + L
Sbjct: 91 KDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLL 150
Query: 205 RFAVDVARGMAFLHS 219
+F VD+A GM +L +
Sbjct: 151 KFMVDIALGMEYLSN 165
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo
sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A*
3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A*
3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A*
3ad6_A* 3kmm_A* 1qpd_A* ...
Length = 279
Score = 74.9 bits (185), Expect = 3e-16
Identities = 31/122 (25%), Positives = 53/122 (43%), Gaps = 5/122 (4%)
Query: 99 ISLNDLSLHTKISSGPNGDTWRGRWQKNDIVA-KILAVRNCTPRVSRDFNEEFPKLRIFS 157
+ L L ++ +G G+ W G + + VA K L + +P F E ++
Sbjct: 10 VPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD---AFLAEANLMKQLQ 66
Query: 158 HPNVLPVIGCVNSPPDLVVISQYMAWGSLYALLHEGAGIVVDFAQALRFAVDVARGMAFL 217
H ++ + V P ++ +YM GSL L +GI + + L A +A GMAF+
Sbjct: 67 HQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI 125
Query: 218 HS 219
Sbjct: 126 EE 127
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase,
transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP:
b.34.2.1 d.93.1.1 d.144.1.7
Length = 535
Score = 75.7 bits (186), Expect = 5e-16
Identities = 32/122 (26%), Positives = 53/122 (43%), Gaps = 5/122 (4%)
Query: 99 ISLNDLSLHTKISSGPNGDTWRGRWQKNDIVA-KILAVRNCTPRVSRDFNEEFPKLRIFS 157
I L L K+ G G+ W G W VA K L +P F +E ++
Sbjct: 264 IPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPE---AFLQEAQVMKKLR 320
Query: 158 HPNVLPVIGCVNSPPDLVVISQYMAWGSLYALLHEGAGIVVDFAQALRFAVDVARGMAFL 217
H ++ + V+ P + ++++YM+ GSL L G + Q + A +A GMA++
Sbjct: 321 HEKLVQLYAVVSEEP-IYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYV 379
Query: 218 HS 219
Sbjct: 380 ER 381
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor,
ATP-binding, nucleotide-binding, oncogene, TRAN; HET:
B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A*
1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A*
3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A*
3oy3_A* 2hiw_A* 2v7a_A* ...
Length = 288
Score = 73.4 bits (181), Expect = 1e-15
Identities = 31/123 (25%), Positives = 58/123 (47%), Gaps = 5/123 (4%)
Query: 99 ISLNDLSLHTKISSGPNGDTWRGRWQKNDI-VA-KILAVRNCTPRVSRDFNEEFPKLRIF 156
+ D+++ K+ G G+ + G W+K + VA K L + T V +F +E ++
Sbjct: 10 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL--KEDTMEVE-EFLKEAAVMKEI 66
Query: 157 SHPNVLPVIGCVNSPPDLVVISQYMAWGSLYALLHEGAGIVVDFAQALRFAVDVARGMAF 216
HPN++ ++G P +I+++M +G+L L E V L A ++ M +
Sbjct: 67 KHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEY 126
Query: 217 LHS 219
L
Sbjct: 127 LEK 129
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene,
ATP-binding, cell cycle, disea mutation, glycoprotein,
membrane, nucleotide-binding; HET: 03P; 1.50A {Homo
sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A*
1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A*
2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A*
2jiu_A* ...
Length = 327
Score = 73.5 bits (181), Expect = 1e-15
Identities = 25/135 (18%), Positives = 55/135 (40%), Gaps = 7/135 (5%)
Query: 90 DATLSRHKGISLNDLSLHTKISSGPNGDTWRGRWQKNDIVAKIL-AV----RNCTPRVSR 144
+ + + + + SG G ++G W KI A+ +P+ ++
Sbjct: 3 APNQALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK 62
Query: 145 DFNEEFPKLRIFSHPNVLPVIGCVNSPPDLVVISQYMAWGSLYALLHEGAGIVVDFAQAL 204
+ +E + +P+V ++G + + +I+Q M +G L + E + L
Sbjct: 63 EILDEAYVMASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREHKD-NIGSQYLL 120
Query: 205 RFAVDVARGMAFLHS 219
+ V +A+GM +L
Sbjct: 121 NWCVQIAKGMNYLED 135
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6,
ankyrin reapeat, ANK RE calcium channel, calcium
transport, calmodulin-binding; 1.70A {Mus musculus}
Length = 232
Score = 71.9 bits (177), Expect = 2e-15
Identities = 24/69 (34%), Positives = 29/69 (42%), Gaps = 13/69 (18%)
Query: 8 DDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDD-------------TPLHLAAAH 54
G + LH A ++ LV LL RGA V+A G PL AA
Sbjct: 72 LYEGQTALHIAVINQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACV 131
Query: 55 GHLDIVRLL 63
G +IVRLL
Sbjct: 132 GSEEIVRLL 140
Score = 71.5 bits (176), Expect = 3e-15
Identities = 14/65 (21%), Positives = 28/65 (43%), Gaps = 5/65 (7%)
Query: 4 VSVTDDHGFSPLHWACKEGHLKLVELLLQRGARV-----NATNRGDDTPLHLAAAHGHLD 58
V G + LH A +L+ +L++ + + T LH+A + +++
Sbjct: 30 VHQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALHIAVINQNVN 89
Query: 59 IVRLL 63
+VR L
Sbjct: 90 LVRAL 94
Score = 71.1 bits (175), Expect = 4e-15
Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Query: 11 GFSPLHWACKEGHLKLV-ELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLL 63
SPL A KE ++ + +LL G V+ +T LH+AA + +L+ +L
Sbjct: 3 WESPLLLAAKENDVQALSKLLKFEGCEVHQRGAMGETALHIAALYDNLEAAMVL 56
Score = 66.9 bits (164), Expect = 1e-13
Identities = 14/56 (25%), Positives = 26/56 (46%)
Query: 8 DDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLL 63
+G PL +A G ++V LL++ GA + A + +T LH+ + +
Sbjct: 118 IYYGEHPLSFAACVGSEEIVRLLIEHGADIRAQDSLGNTVLHILILQPNKTFACQM 173
Score = 63.8 bits (156), Expect = 2e-12
Identities = 13/70 (18%), Positives = 25/70 (35%), Gaps = 10/70 (14%)
Query: 4 VSVTDDHGFSPLHWACKEGH----LKLVELLLQRGARVNATNRGDD------TPLHLAAA 53
+ D G + LH + + ++ LLL + + TP LA
Sbjct: 147 IRAQDSLGNTVLHILILQPNKTFACQMYNLLLSYDGGDHLKSLELVPNNQGLTPFKLAGV 206
Query: 54 HGHLDIVRLL 63
G++ + + L
Sbjct: 207 EGNIVMFQHL 216
Score = 51.8 bits (125), Expect = 3e-08
Identities = 9/37 (24%), Positives = 20/37 (54%)
Query: 5 SVTDDHGFSPLHWACKEGHLKLVELLLQRGARVNATN 41
V ++ G +P A EG++ + + L+Q+ + A +
Sbjct: 191 LVPNNQGLTPFKLAGVEGNIVMFQHLMQKRKHIAAAH 227
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive
kinase, HER3, ATP-binding, cell membrane, membrane,
nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB:
3lmg_A*
Length = 325
Score = 72.7 bits (179), Expect = 2e-15
Identities = 23/126 (18%), Positives = 47/126 (37%), Gaps = 7/126 (5%)
Query: 99 ISLNDLSLHTKISSGPNGDTWRGRWQKNDIVAKIL-AV----RNCTPRVSRDFNEEFPKL 153
+L + SG G +G W KI + + + + +
Sbjct: 10 FKETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAI 69
Query: 154 RIFSHPNVLPVIGCVNSPPDLVVISQYMAWGSLYALLHEGAGIVVDFAQALRFAVDVARG 213
H +++ ++G L +++QY+ GSL + + G + L + V +A+G
Sbjct: 70 GSLDHAHIVRLLGLCPGSS-LQLVTQYLPLGSLLDHVRQHRG-ALGPQLLLNWGVQIAKG 127
Query: 214 MAFLHS 219
M +L
Sbjct: 128 MYYLEE 133
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor,
receptor tyrosine kinase, spirocyc kinase domain,
phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus
musculus}
Length = 323
Score = 72.0 bits (177), Expect = 4e-15
Identities = 33/136 (24%), Positives = 52/136 (38%), Gaps = 15/136 (11%)
Query: 99 ISLNDLSLHTKISSGPNGDTWRGRWQKND----IVA-KILAVRNCTPRVSRDFNEEFPKL 153
I +L + G G + ++ D VA K+L +F E +
Sbjct: 20 IPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACM 79
Query: 154 RIFSHPNVLPVIGCV------NSPPDLVVISQYMAWGSLYALL----HEGAGIVVDFAQA 203
+ F HP+V ++G P +VI +M G L+A L +
Sbjct: 80 KEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTL 139
Query: 204 LRFAVDVARGMAFLHS 219
+RF VD+A GM +L S
Sbjct: 140 VRFMVDIACGMEYLSS 155
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase,
quinoxaline, alternative splicing, ATP-binding,
chromosomal rearrangement; HET: IHX; 1.40A {Homo
sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A*
2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A*
2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A*
3ctj_A* ...
Length = 298
Score = 71.5 bits (176), Expect = 6e-15
Identities = 34/126 (26%), Positives = 49/126 (38%), Gaps = 6/126 (4%)
Query: 99 ISLNDLSLHTKISSGPNGDTWRGRWQKNDIVAKILAV----RNCTPRVSRDFNEEFPKLR 154
S + + I G G + G ND AV R F E ++
Sbjct: 22 PSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMK 81
Query: 155 IFSHPNVLPVIG-CVNSPPDLVVISQYMAWGSLYALLHEGAGIVVDFAQALRFAVDVARG 213
FSHPNVL ++G C+ S +V+ YM G L + + F + VA+G
Sbjct: 82 DFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH-NPTVKDLIGFGLQVAKG 140
Query: 214 MAFLHS 219
M +L S
Sbjct: 141 MKYLAS 146
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal
transduction, GRB2, SHC, ATP-binding, glycoprotein,
membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Length = 373
Score = 72.1 bits (177), Expect = 6e-15
Identities = 35/126 (27%), Positives = 49/126 (38%), Gaps = 6/126 (4%)
Query: 99 ISLNDLSLHTKISSGPNGDTWRGRWQKNDIVAKILAV----RNCTPRVSRDFNEEFPKLR 154
S + + I G G + G ND AV R F E ++
Sbjct: 86 PSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMK 145
Query: 155 IFSHPNVLPVIG-CVNSPPDLVVISQYMAWGSLYALLHEGAGIVVDFAQALRFAVDVARG 213
FSHPNVL ++G C+ S +V+ YM G L + + F + VA+G
Sbjct: 146 DFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETH-NPTVKDLIGFGLQVAKG 204
Query: 214 MAFLHS 219
M FL S
Sbjct: 205 MKFLAS 210
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium,
SGC, metal binding protein; 2.06A {Homo sapiens}
Length = 301
Score = 70.8 bits (173), Expect = 1e-14
Identities = 19/78 (24%), Positives = 28/78 (35%)
Query: 4 VSVTDDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLL 63
+ G + LH+A ++LLL+ A V N +T L +A H + LL
Sbjct: 219 LDAKAADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELL 278
Query: 64 AVQNNQDLTKINFKDQSW 81
D SW
Sbjct: 279 EQAQAGTFAFPLHVDYSW 296
Score = 57.3 bits (138), Expect = 5e-10
Identities = 18/74 (24%), Positives = 32/74 (43%), Gaps = 4/74 (5%)
Query: 5 SVTDDHGFSPLHWAC---KEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVR 61
LH A + L LV+ ++Q G ++A +T LH AA + D ++
Sbjct: 184 PDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLK 243
Query: 62 LLAVQNNQDLTKIN 75
LL ++ + +N
Sbjct: 244 LL-LKGRALVGTVN 256
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS
autophosphorylation conformation, recept tyrosine
kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo
sapiens}
Length = 298
Score = 70.8 bits (174), Expect = 1e-14
Identities = 30/141 (21%), Positives = 46/141 (32%), Gaps = 10/141 (7%)
Query: 84 LKTRSRDATLSRHKGISLNDLSLHTKISSGPNGDTWRGRWQKNDIVAKILAV----RNCT 139
L +D + + I G G + G + A+ R
Sbjct: 7 LLAEVKDVLIPHER----VVTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITE 62
Query: 140 PRVSRDFNEEFPKLRIFSHPNVLPVIG-CVNSPPDLVVISQYMAWGSLYALLHEGAGIVV 198
+ F E +R +HPNVL +IG + V+ YM G L +
Sbjct: 63 MQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRS-PQRNP 121
Query: 199 DFAQALRFAVDVARGMAFLHS 219
+ F + VARGM +L
Sbjct: 122 TVKDLISFGLQVARGMEYLAE 142
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats,
cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP:
d.211.1.1
Length = 327
Score = 70.8 bits (173), Expect = 1e-14
Identities = 14/50 (28%), Positives = 26/50 (52%)
Query: 7 TDDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGH 56
D+HG +PLHW +L+LV+ L++ G+ + ++ L A +
Sbjct: 127 VDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVN 176
Score = 66.6 bits (162), Expect = 4e-13
Identities = 13/49 (26%), Positives = 25/49 (51%)
Query: 4 VSVTDDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAA 52
++ D +G + L+ A + G++ +V+ LL GA N+ P+ A
Sbjct: 276 LNAQDSNGDTCLNIAARLGNISIVDALLDYGADPFIANKSGLRPVDFGA 324
Score = 49.6 bits (118), Expect = 2e-07
Identities = 14/56 (25%), Positives = 27/56 (48%)
Query: 8 DDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLL 63
+ + + K+ L+ ++L +NA + DT L++AA G++ IV L
Sbjct: 247 KESKPNDKNGERKDSILENLDLKWIIANMLNAQDSNGDTCLNIAARLGNISIVDAL 302
Score = 46.9 bits (111), Expect = 2e-06
Identities = 16/93 (17%), Positives = 30/93 (32%), Gaps = 16/93 (17%)
Query: 4 VSVTDDHGFSPLHWACKEGHLK----LVELLLQRGARVNATNRGDDTPLHLAA------- 52
D+ G S L A K + LL + + + T LH
Sbjct: 157 RLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLILEDSMNRTILHHIIITSGMTG 216
Query: 53 ----AHGHLD-IVRLLAVQNNQDLTKINFKDQS 80
A +LD ++ + + N+ + + +S
Sbjct: 217 CSAAAKYYLDILMGWIVKKQNRPIQSGTNEKES 249
Score = 43.1 bits (101), Expect = 4e-05
Identities = 8/88 (9%), Positives = 22/88 (25%), Gaps = 12/88 (13%)
Query: 4 VSVTDDHGFSPLHWACKEGHLK------------LVELLLQRGARVNATNRGDDTPLHLA 51
+ + D + LH + L+ ++++ R + +
Sbjct: 194 LILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPND 253
Query: 52 AAHGHLDIVRLLAVQNNQDLTKINFKDQ 79
D + +N +D
Sbjct: 254 KNGERKDSILENLDLKWIIANMLNAQDS 281
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP
binding, phosphorylation, intracellular,
transferase-transferase inhibitor complex; HET: IAQ;
1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A*
3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A*
3mj1_A* 3mj2_A*
Length = 267
Score = 69.9 bits (172), Expect = 2e-14
Identities = 35/121 (28%), Positives = 54/121 (44%), Gaps = 7/121 (5%)
Query: 99 ISLNDLSLHTKISSGPNGDTWRGRWQKNDIVA-KILAVRNCTPRVSRDFNEEFPKLRIFS 157
I ++L+ +I SG G G W D VA K + R DF EE + S
Sbjct: 5 IDPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTI--REGAMSEE-DFIEEAEVMMKLS 61
Query: 158 HPNVLPVIG-CVNSPPDLVVISQYMAWGSLYALLHEGAGIVVDFAQALRFAVDVARGMAF 216
HP ++ + G C+ P + +++++M G L L G + L +DV GMA+
Sbjct: 62 HPKLVQLYGVCLEQAP-ICLVTEFMEHGCLSDYLRTQRG-LFAAETLLGMCLDVCEGMAY 119
Query: 217 L 217
L
Sbjct: 120 L 120
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES,
fujinami, avian sarcoma, viral, feline virus, SGC; HET:
STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Length = 377
Score = 70.7 bits (174), Expect = 2e-14
Identities = 34/124 (27%), Positives = 56/124 (45%), Gaps = 6/124 (4%)
Query: 99 ISLNDLSLHTKISSGPNGDTWRGRWQKNDI-VA-KILAVRNCTPRVSRDFNEEFPKLRIF 156
++ DL L +I G G+ + GR + ++ VA K P + F +E L+ +
Sbjct: 111 LNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCR-ETLPPDLKAKFLQEARILKQY 169
Query: 157 SHPNVLPVIG-CVNSPPDLVVISQYMAWGSLYALLHEGAGIVVDFAQALRFAVDVARGMA 215
SHPN++ +IG C P +V+ + + G L G + L+ D A GM
Sbjct: 170 SHPNIVRLIGVCTQKQPIYIVM-ELVQGGDFLTFLRTE-GARLRVKTLLQMVGDAAAGME 227
Query: 216 FLHS 219
+L S
Sbjct: 228 YLES 231
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats,
metal binding protein; 2.10A {Mus musculus} SCOP:
d.211.1.1 g.45.1.1
Length = 278
Score = 69.6 bits (170), Expect = 3e-14
Identities = 16/60 (26%), Positives = 27/60 (45%)
Query: 4 VSVTDDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLL 63
+ G + LH+ C + + ++LLL+ A + N +TPL +A H LL
Sbjct: 198 LDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIEIANESGETPLDIAKRLKHEHCEELL 257
Score = 55.8 bits (134), Expect = 2e-09
Identities = 13/74 (17%), Positives = 29/74 (39%), Gaps = 4/74 (5%)
Query: 5 SVTDDHGFSPLHWACKEG---HLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVR 61
+ + + LH A + L +V+ L+Q ++ T LH + + ++
Sbjct: 163 ANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLK 222
Query: 62 LLAVQNNQDLTKIN 75
LL ++ + N
Sbjct: 223 LL-LRGKASIEIAN 235
Score = 30.3 bits (68), Expect = 0.51
Identities = 9/29 (31%), Positives = 15/29 (51%)
Query: 4 VSVTDDHGFSPLHWACKEGHLKLVELLLQ 32
+ + ++ G +PL A + H ELL Q
Sbjct: 231 IEIANESGETPLDIAKRLKHEHCEELLTQ 259
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding,
tyrosine-protein kinase, proto-oncogene, phosphoprotein,
disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo
sapiens}
Length = 326
Score = 69.7 bits (171), Expect = 3e-14
Identities = 37/157 (23%), Positives = 61/157 (38%), Gaps = 16/157 (10%)
Query: 71 LTKINFKDQSWLGLKTRSRDATLSRHKGISLNDLSLHTKISSGPNGDTWRGRW-----QK 125
T N Q +G RD T L ++ G G R+
Sbjct: 15 PTTENLYFQGAMGSAFEDRDPTQ-----FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNT 69
Query: 126 NDIVA-KILAVRNCTPRVSRDFNEEFPKLRIFSHPNVLPVIGCVNSPPD--LVVISQYMA 182
++VA K L ++ T RDF E L+ H N++ G S L +I +Y+
Sbjct: 70 GEVVAVKKL--QHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLP 127
Query: 183 WGSLYALLHEGAGIVVDFAQALRFAVDVARGMAFLHS 219
+GSL L + +D + L++ + +GM +L +
Sbjct: 128 YGSLRDYLQKHKE-RIDHIKLLQYTSQICKGMEYLGT 163
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP
binding, transferase-transfera inhibitor complex; HET:
046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A*
3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A*
3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A*
Length = 295
Score = 69.2 bits (170), Expect = 3e-14
Identities = 30/129 (23%), Positives = 53/129 (41%), Gaps = 11/129 (8%)
Query: 99 ISLNDLSLHTKISSGPNGDTWRGRW-----QKNDIVA-KILAVRNCTPRVSRDFNEEFPK 152
L ++ G G R+ ++VA K L ++ T RDF E
Sbjct: 7 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKL--QHSTEEHLRDFEREIEI 64
Query: 153 LRIFSHPNVLPVIGCVNSPPD--LVVISQYMAWGSLYALLHEGAGIVVDFAQALRFAVDV 210
L+ H N++ G S L +I +Y+ +GSL L + +D + L++ +
Sbjct: 65 LKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKE-RIDHIKLLQYTSQI 123
Query: 211 ARGMAFLHS 219
+GM +L +
Sbjct: 124 CKGMEYLGT 132
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain,
transferase-transferase inhibit complex; HET: PTR 0NT;
1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A*
3eyh_A*
Length = 302
Score = 68.1 bits (167), Expect = 1e-13
Identities = 26/128 (20%), Positives = 44/128 (34%), Gaps = 8/128 (6%)
Query: 99 ISLNDLSLHTKISSGPNGDTWRGRWQKNDIVAKIL-AV----RNCTPRVSRDFNEEFPKL 153
L + G G R+ AV D +E L
Sbjct: 18 FEKRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEIL 77
Query: 154 RIFSHPNVLPVIGCVNSPPD--LVVISQYMAWGSLYALLHEGAGIVVDFAQALRFAVDVA 211
R H N++ G + +I +++ GSL L + ++ Q L++AV +
Sbjct: 78 RNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKN-KINLKQQLKYAVQIC 136
Query: 212 RGMAFLHS 219
+GM +L S
Sbjct: 137 KGMDYLGS 144
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase,
ATP binding, phosphoryla transferase; HET: ATP; 1.75A
{Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Length = 289
Score = 67.7 bits (166), Expect = 1e-13
Identities = 27/129 (20%), Positives = 49/129 (37%), Gaps = 14/129 (10%)
Query: 99 ISLNDLSLHTKISSGPNGDTWRGRWQKNDI--------VA-KILAVRNCTPRVSRDFNEE 149
I DL + + G ++G ++ V K+L S F E
Sbjct: 5 IRNEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVL--DKAHRNYSESFFEA 62
Query: 150 FPKLRIFSHPNVLPVIG-CVNSPPDLVVISQYMAWGSLYALLHEGAGIVVDFAQALRFAV 208
+ SH +++ G CV +++V +++ +GSL L + ++ L A
Sbjct: 63 ASMMSKLSHKHLVLNYGVCVCGDENILVQ-EFVKFGSLDTYLKKNKN-CINILWKLEVAK 120
Query: 209 DVARGMAFL 217
+A M FL
Sbjct: 121 QLAAAMHFL 129
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase,
4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3,
2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43;
1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A*
3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A*
1k2p_A
Length = 283
Score = 67.2 bits (165), Expect = 2e-13
Identities = 32/121 (26%), Positives = 52/121 (42%), Gaps = 7/121 (5%)
Query: 99 ISLNDLSLHTKISSGPNGDTWRGRWQKNDIVA-KILAVRNCTPRVSRDFNEEFPKLRIFS 157
I DL+ ++ +G G G+W+ VA K++ + + +F EE + S
Sbjct: 21 IDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMI--KEGSMSED-EFIEEAKVMMNLS 77
Query: 158 HPNVLPVIG-CVNSPPDLVVISQYMAWGSLYALLHEGAGIVVDFAQALRFAVDVARGMAF 216
H ++ + G C P + +I++YMA G L L E Q L DV M +
Sbjct: 78 HEKLVQLYGVCTKQRP-IFIITEYMANGCLLNYLREMRH-RFQTQQLLEMCKDVCEAMEY 135
Query: 217 L 217
L
Sbjct: 136 L 136
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET:
ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A*
2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A*
2jko_A* 2jkk_A*
Length = 281
Score = 66.9 bits (164), Expect = 2e-13
Identities = 28/125 (22%), Positives = 55/125 (44%), Gaps = 6/125 (4%)
Query: 99 ISLNDLSLHTKISSGPNGDTWRGRWQKNDIVAKILAVR----NCTPRVSRDFNEEFPKLR 154
I + L I G GD +G + + A +A++ + V F +E +R
Sbjct: 12 IQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMR 71
Query: 155 IFSHPNVLPVIGCVNSPPDLVVISQYMAWGSLYALLHEGAGIVVDFAQALRFAVDVARGM 214
F HP+++ +IG + P +++ + G L + L +D A + +A ++ +
Sbjct: 72 QFDHPHIVKLIGVITENPVWIIM-ELCTLGELRSFLQVRKY-SLDLASLILYAYQLSTAL 129
Query: 215 AFLHS 219
A+L S
Sbjct: 130 AYLES 134
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN
inhibitor, ATP-binding mutation, membrane,
nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A
{Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A*
Length = 327
Score = 67.4 bits (165), Expect = 2e-13
Identities = 27/129 (20%), Positives = 49/129 (37%), Gaps = 11/129 (8%)
Query: 99 ISLNDLSLHTKISSGPNGDTWRGRW-----QKNDIVA-KILAVRNCTPRVSRDFNEEFPK 152
L +++ G G R+ +VA K L ++ P RDF E
Sbjct: 20 FEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQL--QHSGPDQQRDFQREIQI 77
Query: 153 LRIFSHPNVLPVIGCVNSPPD--LVVISQYMAWGSLYALLHEGAGIVVDFAQALRFAVDV 210
L+ ++ G P L ++ +Y+ G L L +D ++ L ++ +
Sbjct: 78 LKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRA-RLDASRLLLYSSQI 136
Query: 211 ARGMAFLHS 219
+GM +L S
Sbjct: 137 CKGMEYLGS 145
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding,
transfera phosphorylation, transmembrane,
tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Length = 325
Score = 66.9 bits (164), Expect = 3e-13
Identities = 34/135 (25%), Positives = 53/135 (39%), Gaps = 7/135 (5%)
Query: 90 DATLSRHKGISLNDLSLHTKISSGPNGDTWRGRWQKNDIVAKILAVR----NCTPRVSRD 145
A S + I + + + I SG +G+ GR + +A++ T R RD
Sbjct: 37 RAGRSFTREIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRD 96
Query: 146 FNEEFPKLRIFSHPNVLPVIG-CVNSPPDLVVISQYMAWGSLYALLHEGAGIVVDFAQAL 204
F E + F HPN++ + G ++V +YM GSL L G Q +
Sbjct: 97 FLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVT-EYMENGSLDTFLRTHDG-QFTIMQLV 154
Query: 205 RFAVDVARGMAFLHS 219
V GM +L
Sbjct: 155 GMLRGVGAGMRYLSD 169
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase;
HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Length = 333
Score = 66.6 bits (163), Expect = 3e-13
Identities = 30/135 (22%), Positives = 57/135 (42%), Gaps = 8/135 (5%)
Query: 91 ATLSRHKGISLNDLSLHTKISSGPNGDTWRGRWQKNDIVAKIL-AVR----NCTPRVSRD 145
A L I + ++ I +G G+ ++G + + ++ A++ T + D
Sbjct: 33 AVLKFTTEIHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVD 92
Query: 146 FNEEFPKLRIFSHPNVLPVIG-CVNSPPDLVVISQYMAWGSLYALLHEGAGIVVDFAQAL 204
F E + FSH N++ + G P +++ +YM G+L L E G Q +
Sbjct: 93 FLGEAGIMGQFSHHNIIRLEGVISKYKPMMIIT-EYMENGALDKFLREKDG-EFSVLQLV 150
Query: 205 RFAVDVARGMAFLHS 219
+A GM +L +
Sbjct: 151 GMLRGIAAGMKYLAN 165
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase,
integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB:
2j0k_A*
Length = 656
Score = 67.2 bits (164), Expect = 5e-13
Identities = 29/125 (23%), Positives = 55/125 (44%), Gaps = 6/125 (4%)
Query: 99 ISLNDLSLHTKISSGPNGDTWRGRWQKNDIVAKILAVR----NCTPRVSRDFNEEFPKLR 154
I + L I G GD +G + + A +A++ + V F +E +R
Sbjct: 387 IQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMR 446
Query: 155 IFSHPNVLPVIGCVNSPPDLVVISQYMAWGSLYALLHEGAGIVVDFAQALRFAVDVARGM 214
F HP+++ +IG + P + +I + G L + L +D A + +A ++ +
Sbjct: 447 QFDHPHIVKLIGVITENP-VWIIMELCTLGELRSFLQVRKF-SLDLASLILYAYQLSTAL 504
Query: 215 AFLHS 219
A+L S
Sbjct: 505 AYLES 509
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural
genomics, structural genom consortium, SGC, ATP-binding,
membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A
3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Length = 281
Score = 65.7 bits (161), Expect = 5e-13
Identities = 24/125 (19%), Positives = 55/125 (44%), Gaps = 6/125 (4%)
Query: 99 ISLNDLSLHTKISSGPNGDTWRGRWQKNDIVAKILAV----RNCTPRVSRDFNEEFPKLR 154
I+ D+ L+ + G G+ + G + + +AV ++CT F E ++
Sbjct: 9 IAREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMK 68
Query: 155 IFSHPNVLPVIGCVNSPPDLVVISQYMAWGSLYALLHEGAGIVVDFAQALRFAVDVARGM 214
HP+++ +IG + P +++ + +G L L + + +++ + + M
Sbjct: 69 NLDHPHIVKLIGIIEEEPTWIIM-ELYPYGELGHYLERNKN-SLKVLTLVLYSLQICKAM 126
Query: 215 AFLHS 219
A+L S
Sbjct: 127 AYLES 131
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase;
2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A*
1u54_A* 3eqr_A* 3eqp_B*
Length = 291
Score = 65.7 bits (161), Expect = 5e-13
Identities = 37/127 (29%), Positives = 52/127 (40%), Gaps = 8/127 (6%)
Query: 99 ISLNDLSLHTKISSGPNGDTWRGRWQKNDI----VA-KILAVRNCTP-RVSRDFNEEFPK 152
I DL L K+ G G RG W VA K L + DF E
Sbjct: 15 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNA 74
Query: 153 LRIFSHPNVLPVIGCVNSPPDLVVISQYMAWGSLYALLHEGAGIVVDFAQALRFAVDVAR 212
+ H N++ + G V +PP + ++++ GSL L + G R+AV VA
Sbjct: 75 MHSLDHRNLIRLYGVVLTPP-MKMVTELAPLGSLLDRLRKHQG-HFLLGTLSRYAVQVAE 132
Query: 213 GMAFLHS 219
GM +L S
Sbjct: 133 GMGYLES 139
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen
typrosine kinase, active conformation, structural
genomics, structural genomix; HET: STI; 1.57A {Homo
sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A*
3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A*
3vf9_A*
Length = 291
Score = 65.7 bits (161), Expect = 7e-13
Identities = 25/124 (20%), Positives = 49/124 (39%), Gaps = 8/124 (6%)
Query: 99 ISLNDLSLHTK-ISSGPNGDTWRGRWQKNDI---VA-KILAVRNCTPRVSRDFNEEFPKL 153
+ L+L K + SG G +G +Q + VA KIL P + + E +
Sbjct: 13 LDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVM 72
Query: 154 RIFSHPNVLPVIGCVNSPPDLVVISQYMAWGSLYALLHEGAGIVVDFAQALRFAVDVARG 213
+ +P ++ +IG + +++ + G L L + + + V+ G
Sbjct: 73 QQLDNPYIVRMIGICEAES-WMLVMEMAELGPLNKYLQQNRHVKD--KNIIELVHQVSMG 129
Query: 214 MAFL 217
M +L
Sbjct: 130 MKYL 133
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment,
structural genomics, mutant, structural genomics
consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB:
2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A
2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A*
2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Length = 373
Score = 65.8 bits (161), Expect = 7e-13
Identities = 35/127 (27%), Positives = 56/127 (44%), Gaps = 9/127 (7%)
Query: 99 ISLNDLSLHTKISSGPNGDTWRGRWQ----KNDIVA-KILAVRNCTPRVSRDFNEEFPKL 153
+ ++S+ + +G G+ GR + K VA K L V T + RDF E +
Sbjct: 42 LDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKV-GYTEKQRRDFLGEASIM 100
Query: 154 RIFSHPNVLPVIG-CVNSPPDLVVISQYMAWGSLYALLHEGAGIVVDFAQALRFAVDVAR 212
F HPN++ + G S P ++V +YM GSL + L + Q + +A
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVT-EYMENGSLDSFLRKHDA-QFTVIQLVGMLRGIAS 158
Query: 213 GMAFLHS 219
GM +L
Sbjct: 159 GMKYLSD 165
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase
inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB:
3sxr_A*
Length = 268
Score = 65.3 bits (160), Expect = 8e-13
Identities = 33/123 (26%), Positives = 57/123 (46%), Gaps = 7/123 (5%)
Query: 99 ISLNDLSLHTKISSGPNGDTWRGRWQKNDIVA-KILAVRNCTPRVSRDFNEEFPKLRIFS 157
+ +++L ++ SG G G+W+ VA K++ + + +F +E + S
Sbjct: 5 LKREEITLLKELGSGQFGVVKLGKWKGQYDVAVKMI--KEGSMSE-DEFFQEAQTMMKLS 61
Query: 158 HPNVLPVIG-CVNSPPDLVVISQYMAWGSLYALLHEGAGIVVDFAQALRFAVDVARGMAF 216
HP ++ G C P +V +Y++ G L L G ++ +Q L DV GMAF
Sbjct: 62 HPKLVKFYGVCSKEYPIYIVT-EYISNGCLLNYLRSH-GKGLEPSQLLEMCYDVCEGMAF 119
Query: 217 LHS 219
L S
Sbjct: 120 LES 122
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation,
cancer, PAN inhibitor, ATP-binding nucleotide-binding,
phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo
sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A*
Length = 318
Score = 65.1 bits (159), Expect = 1e-12
Identities = 28/128 (21%), Positives = 48/128 (37%), Gaps = 10/128 (7%)
Query: 99 ISLNDLSLHTKISSGPNGDTWRGRWQKNDIVAKIL-AV----RNCTPRVSRDFNEEFPKL 153
L + G G + + + AV + P+ + +E L
Sbjct: 28 FHKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDIL 87
Query: 154 RIFSHPNVLPVIGCVNSPPD--LVVISQYMAWGSLYALLHEGAGIVVDFAQALRFAVDVA 211
R H +++ GC L ++ +Y+ GSL L + + AQ L FA +
Sbjct: 88 RTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRHS---IGLAQLLLFAQQIC 144
Query: 212 RGMAFLHS 219
GMA+LH+
Sbjct: 145 EGMAYLHA 152
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase
domain, hormone-growth factor complex; 1.50A {Homo
sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A*
1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A*
3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A*
1gag_A* 1irk_A 3bu3_A* ...
Length = 322
Score = 64.2 bits (157), Expect = 3e-12
Identities = 23/139 (16%), Positives = 57/139 (41%), Gaps = 14/139 (10%)
Query: 99 ISLNDLSLHTKISSGPNGDTWRGRWQKNDIVAKILAV------RNCTPRVSRDFNEEFPK 152
++ +++ ++ G G + G + V + R +F E
Sbjct: 22 VAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASV 81
Query: 153 LRIFSHPNVLPVIGCVNSPPDLVVISQYMAWGSLYALL--------HEGAGIVVDFAQAL 204
++ F+ +V+ ++G V+ +VI + M G L + L + ++ +
Sbjct: 82 MKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMI 141
Query: 205 RFAVDVARGMAFLHSLERI 223
+ A ++A GMA+L++ + +
Sbjct: 142 QMAGEIADGMAYLNANKFV 160
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase;
HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A*
2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Length = 327
Score = 63.5 bits (155), Expect = 4e-12
Identities = 26/132 (19%), Positives = 47/132 (35%), Gaps = 11/132 (8%)
Query: 99 ISLNDLSLHTKISSGPNGDTWRGRWQKNDIVAKILAV------RNCTPRVSRDFNEEFPK 152
+ +++L + G G+ + G+ L V C+ + DF E
Sbjct: 27 VPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALI 86
Query: 153 LRIFSHPNVLPVIGCVNSPPDLVVISQYMAWGSLYALL-----HEGAGIVVDFAQALRFA 207
+ F+H N++ IG ++ + MA G L + L + L A
Sbjct: 87 ISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVA 146
Query: 208 VDVARGMAFLHS 219
D+A G +L
Sbjct: 147 RDIACGCQYLEE 158
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding,
glycoprotein, membrane, nucleotide-binding,
phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Length = 367
Score = 63.6 bits (155), Expect = 4e-12
Identities = 28/133 (21%), Positives = 51/133 (38%), Gaps = 13/133 (9%)
Query: 99 ISLNDLSLHTKISSGPNGDTWRGRWQKNDIVAKILAV------RNCTPRVSRDFNEEFPK 152
+ +++L + G G+ + G+ L V C+ + DF E
Sbjct: 68 VPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALI 127
Query: 153 LRIFSHPNVLPVIG-CVNSPPDLVVISQYMAWGSLYALL-----HEGAGIVVDFAQALRF 206
+ F+H N++ IG + S P +++ + MA G L + L + L
Sbjct: 128 ISKFNHQNIVRCIGVSLQSLPRFILL-ELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHV 186
Query: 207 AVDVARGMAFLHS 219
A D+A G +L
Sbjct: 187 ARDIACGCQYLEE 199
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing
protein 1; arfgap domain, zinc-binding module, GTPase
activ metal-binding, nitration; 2.30A {Homo sapiens}
Length = 368
Score = 62.9 bits (152), Expect = 1e-11
Identities = 24/72 (33%), Positives = 33/72 (45%)
Query: 4 VSVTDDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLL 63
V+ D G PLH A GH L L L+RGA + A + PL +A + DIV LL
Sbjct: 261 VNQADSAGRGPLHHATILGHTGLACLFLKRGADLGARDSEGRDPLTIAMETANADIVTLL 320
Query: 64 AVQNNQDLTKIN 75
+ ++
Sbjct: 321 RLAKMREAEAAQ 332
Score = 59.4 bits (143), Expect = 1e-10
Identities = 19/59 (32%), Positives = 22/59 (37%)
Query: 5 SVTDDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLL 63
+PL A L E LLQ GA VN + PLH A GH + L
Sbjct: 229 VNGGQDNATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHATILGHTGLACLF 287
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor;
HET: V4Z; 2.75A {Homo sapiens}
Length = 329
Score = 61.2 bits (149), Expect = 3e-11
Identities = 35/143 (24%), Positives = 52/143 (36%), Gaps = 24/143 (16%)
Query: 99 ISLNDLSLHTKISSGPNGDTWRGRW------QKNDIVA-KILAVRNCTPRVSRDFNEEFP 151
I D+ L ++ G G + Q +VA K L + + +DF E
Sbjct: 38 IKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKAL--KEASESARQDFQREAE 95
Query: 152 KLRIFSHPNVLPVIG-CVNSPPDLVVISQYMAWGSLYALL-------------HEGAGIV 197
L + H +++ G C P L+V +YM G L L + A
Sbjct: 96 LLTMLQHQHIVRFFGVCTEGRPLLMVF-EYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGP 154
Query: 198 VDFAQALRFAVDVARGMAFLHSL 220
+ Q L A VA GM +L L
Sbjct: 155 LGLGQLLAVASQVAAGMVYLAGL 177
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A
{Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A*
2p4i_A* 3l8p_A* 2wqb_A*
Length = 327
Score = 61.1 bits (149), Expect = 3e-11
Identities = 32/140 (22%), Positives = 52/140 (37%), Gaps = 20/140 (14%)
Query: 99 ISLNDLSLHTKISSGPNGDTWRGRWQKNDIVAKILAV----RNCTPRVSRDFNEEFPKL- 153
+ ND+ I G G + R +K+ + A+ + RDF E L
Sbjct: 22 LDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDA-AIKRMKEYASKDDHRDFAGELEVLC 80
Query: 154 RIFSHPNVLPVIGCVNSPPDLVVISQYMAWGSL--------------YALLHEGAGIVVD 199
++ HPN++ ++G L + +Y G+L + +
Sbjct: 81 KLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLS 140
Query: 200 FAQALRFAVDVARGMAFLHS 219
Q L FA DVARGM +L
Sbjct: 141 SQQLLHFAADVARGMDYLSQ 160
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo
sapiens} SCOP: d.144.1.7
Length = 287
Score = 60.7 bits (148), Expect = 3e-11
Identities = 20/124 (16%), Positives = 47/124 (37%), Gaps = 8/124 (6%)
Query: 99 ISLNDLSL-HTKISSGPNGDTWRGRWQKND---IVA-KILAVRNCTPRVSRDFNEEFPKL 153
+ ++L + ++ G G +G ++ VA K+L + + E +
Sbjct: 6 LKRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQ-GTEKADTEEMMREAQIM 64
Query: 154 RIFSHPNVLPVIGCVNSPPDLVVISQYMAWGSLYALLHEGAGIVVDFAQALRFAVDVARG 213
+P ++ +IG + L+++ + G L+ L + + V+ G
Sbjct: 65 HQLDNPYIVRLIGVCQAEA-LMLVMEMAGGGPLHKFLVGKRE-EIPVSNVAELLHQVSMG 122
Query: 214 MAFL 217
M +L
Sbjct: 123 MKYL 126
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2,
autoinhibition, ITAM, hydrogen bonding network, TCR
signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Length = 613
Score = 60.7 bits (147), Expect = 6e-11
Identities = 23/120 (19%), Positives = 46/120 (38%), Gaps = 7/120 (5%)
Query: 102 NDLSLHTKISSGPNGDTWRGRW--QKNDI-VA-KILAVRNCTPRVSRDFNEEFPKLRIFS 157
N L ++ G G +G + +K I VA K+L + + E +
Sbjct: 336 NLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQ-GTEKADTEEMMREAQIMHQLD 394
Query: 158 HPNVLPVIGCVNSPPDLVVISQYMAWGSLYALLHEGAGIVVDFAQALRFAVDVARGMAFL 217
+P ++ +IG + L+++ + G L+ L + + V+ GM +L
Sbjct: 395 NPYIVRLIGVCQAEA-LMLVMEMAGGGPLHKFLVGKRE-EIPVSNVAELLHQVSMGMKYL 452
>3v5q_A NT-3 growth factor receptor; kinase domain, kinase,
phosphorylation, transferase-transfer inhibitor complex;
HET: 0F4; 2.20A {Homo sapiens}
Length = 297
Score = 59.9 bits (146), Expect = 6e-11
Identities = 33/144 (22%), Positives = 54/144 (37%), Gaps = 25/144 (17%)
Query: 99 ISLNDLSLHTKISSGPNGDTWRGRW------QKNDIVA-KILAVRNCTPRVSRDFNEEFP 151
I D+ L ++ G G + + +VA K L ++ T +DF E
Sbjct: 12 IKRRDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKAL--KDPTLAARKDFQREAE 69
Query: 152 KLRIFSHPNVLPVIG-CVNSPPDLVVISQYMAWGSLYALL--------------HEGAGI 196
L H +++ G C + P L+++ +YM G L L A
Sbjct: 70 LLTNLQHEHIVKFYGVCGDGDP-LIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKG 128
Query: 197 VVDFAQALRFAVDVARGMAFLHSL 220
+ +Q L A +A GM +L S
Sbjct: 129 ELGLSQMLHIASQIASGMVYLASQ 152
>3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase,
neurotrophic tyrosine kinase, receptor-related NTRKR2;
2.90A {Homo sapiens}
Length = 289
Score = 59.9 bits (146), Expect = 6e-11
Identities = 28/143 (19%), Positives = 49/143 (34%), Gaps = 24/143 (16%)
Query: 99 ISLNDLSLHTKISSGPNGDTWRGRW------QKNDIVA-KILAVRNCTPRVSRDFNEEFP 151
ISL+ + ++ G ++G ++ VA K L + +F E
Sbjct: 6 ISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKD-KAEGPLREEFRHEAM 64
Query: 152 KLRIFSHPNVLPVIG-CVNSPPDLVVISQYMAWGSLYALLHE--------------GAGI 196
HPNV+ ++G P L +I Y + G L+ L
Sbjct: 65 LRARLQHPNVVCLLGVVTKDQP-LSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKS 123
Query: 197 VVDFAQALRFAVDVARGMAFLHS 219
++ + +A GM +L S
Sbjct: 124 ALEPPDFVHLVAQIAAGMEYLSS 146
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation,
signal transduction, MASS spectrometry, transferase;
2.05A {Rattus norvegicus} SCOP: d.144.1.7
Length = 343
Score = 58.1 bits (141), Expect = 4e-10
Identities = 30/151 (19%), Positives = 50/151 (33%), Gaps = 30/151 (19%)
Query: 99 ISLNDLSLHTKISSGPNGDTWRGRWQKNDIVAKILAV------RNCTPRVSRDFNEEFPK 152
N++ I G G ++ R V + + DF E
Sbjct: 44 YPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAAL 103
Query: 153 LRIFSHPNVLPVIG-CVNSPPDLVVISQYMAWGSLYALL--------------------- 190
+ F +PN++ ++G C P + ++ +YMA+G L L
Sbjct: 104 MAEFDNPNIVKLLGVCAVGKP-MCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRAR 162
Query: 191 -HEGAGIVVDFAQALRFAVDVARGMAFLHSL 220
+ A+ L A VA GMA+L
Sbjct: 163 VSSPGPPPLSCAEQLCIARQVAAGMAYLSER 193
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET;
nucleotide-binding, hirschsprung disease,
phosphorylation, disease mutation; HET: ACK; 2.00A {Homo
sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A*
2ivv_A*
Length = 314
Score = 57.2 bits (139), Expect = 6e-10
Identities = 29/149 (19%), Positives = 50/149 (33%), Gaps = 28/149 (18%)
Query: 99 ISLNDLSLHTKISSGPNGDTWRGRWQKNDIVAKILAV------RNCTPRVSRDFNEEFPK 152
+L L + G G + A V N +P RD EF
Sbjct: 20 FPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNV 79
Query: 153 LRIFSHPNVLPVIGCVNSPPDLVVISQYMAWGSL----------------------YALL 190
L+ +HP+V+ + G + L++I +Y +GSL + L
Sbjct: 80 LKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSL 139
Query: 191 HEGAGIVVDFAQALRFAVDVARGMAFLHS 219
+ + FA +++GM +L
Sbjct: 140 DHPDERALTMGDLISFAWQISQGMQYLAE 168
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis,
nucleotide-binding, inhibitor, phosphorylation receptor,
transferase, transmembrane; HET: 00J; 1.50A {Homo
sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A*
3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A*
2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A*
3cpc_A* ...
Length = 316
Score = 56.5 bits (137), Expect = 1e-09
Identities = 30/144 (20%), Positives = 46/144 (31%), Gaps = 24/144 (16%)
Query: 99 ISLNDLSLHTKISSGPNGDTWRGRWQKNDIVAKILAV------RNCTPRVSRDFNEEFPK 152
+ L L + G G D A V T R E
Sbjct: 24 FPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKI 83
Query: 153 L-RIFSHPNVLPVIGCV--NSPPDLVVISQYMAWGSLYALL--------------HEGAG 195
L I H NV+ ++G P L+VI ++ +G+L L +
Sbjct: 84 LIHIGHHLNVVNLLGACTKPGGP-LMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYK 142
Query: 196 IVVDFAQALRFAVDVARGMAFLHS 219
+ + ++ VA+GM FL S
Sbjct: 143 DFLTLEHLICYSFQVAKGMEFLAS 166
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing
protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1,
linkers, alternat splicing; HET: GDP; 3.38A {Homo
sapiens} PDB: 3lvr_E*
Length = 497
Score = 54.9 bits (132), Expect = 5e-09
Identities = 21/118 (17%), Positives = 41/118 (34%), Gaps = 1/118 (0%)
Query: 4 VSVTDDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLL 63
+ G + LH+A ++LLL+ A V N +T L +A H + LL
Sbjct: 200 LDAKAADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELL 259
Query: 64 A-VQNNQDLTKINFKDQSWLGLKTRSRDATLSRHKGISLNDLSLHTKISSGPNGDTWR 120
Q ++ + + S D++LS ++ ++ +
Sbjct: 260 EQAQAGTFAFPLHVDYSWVISTENLSSDSSLSSPSALNSLSSPSALNSTASNSPGIEG 317
Score = 54.5 bits (131), Expect = 7e-09
Identities = 20/85 (23%), Positives = 38/85 (44%), Gaps = 4/85 (4%)
Query: 8 DDHGFSPLHWACK---EGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLLA 64
LH A K + L LV+ ++Q G ++A +T LH AA + D ++LL
Sbjct: 168 QAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKLL- 226
Query: 65 VQNNQDLTKINFKDQSWLGLKTRSR 89
++ + +N ++ L + +
Sbjct: 227 LKGRALVGTVNEAGETALDIARKKH 251
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene
homolog; kinase, structure, inhibitor, STI-571, gleevec,
transferase activator; HET: STI; 1.60A {Homo sapiens}
SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Length = 313
Score = 54.2 bits (131), Expect = 6e-09
Identities = 30/144 (20%), Positives = 49/144 (34%), Gaps = 23/144 (15%)
Query: 99 ISLNDLSLHTKISSGPNGDTWRGRWQ--KNDIVAKILAV----RNCTPRVSRDFNEEFPK 152
N LS + +G G A +AV + E
Sbjct: 20 FPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKV 79
Query: 153 L-RIFSHPNVLPVIGCVNSPPDLVVISQYMAWGSL----------------YALLHEGAG 195
L + +H N++ ++G +VI++Y +G L + E
Sbjct: 80 LSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDE 139
Query: 196 IVVDFAQALRFAVDVARGMAFLHS 219
+ +D L F+ VA+GMAFL S
Sbjct: 140 LALDLEDLLSFSYQVAKGMAFLAS 163
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting
of N- and C-lobes, transferase; 2.40A {Homo sapiens}
SCOP: d.144.1.7 PDB: 1xr0_A
Length = 370
Score = 54.3 bits (131), Expect = 7e-09
Identities = 30/145 (20%), Positives = 49/145 (33%), Gaps = 25/145 (17%)
Query: 99 ISLNDLSLHTKISSGPNGDTWRGRWQKND--------IVA-KILAVRNCTPRVSRDFNEE 149
+ L+L + G G D VA K+L + T + D E
Sbjct: 78 FPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLK-DDATEKDLSDLVSE 136
Query: 150 FPKL-RIFSHPNVLPVIGCVNSPPDLVVISQYMAWGSLYALL--------------HEGA 194
+ I H N++ ++G L VI +Y + G+L L +
Sbjct: 137 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP 196
Query: 195 GIVVDFAQALRFAVDVARGMAFLHS 219
+ F + +ARGM +L S
Sbjct: 197 EEQMTFKDLVSCTYQLARGMEYLAS 221
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting
of N- and C-lobes, transferase; HET: PTR ACP; 1.80A
{Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A*
2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A*
3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A*
3js2_A* 3ky2_A ...
Length = 334
Score = 53.8 bits (130), Expect = 8e-09
Identities = 30/145 (20%), Positives = 49/145 (33%), Gaps = 25/145 (17%)
Query: 99 ISLNDLSLHTKISSGPNGDTWRGRWQKND--------IVA-KILAVRNCTPRVSRDFNEE 149
+ L+L + G G D VA K+L + T + D E
Sbjct: 32 FPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLK-DDATEKDLSDLVSE 90
Query: 150 FPKL-RIFSHPNVLPVIGCVNSPPDLVVISQYMAWGSLYALL--------------HEGA 194
+ I H N++ ++G L VI +Y + G+L L +
Sbjct: 91 MEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVP 150
Query: 195 GIVVDFAQALRFAVDVARGMAFLHS 219
+ F + +ARGM +L S
Sbjct: 151 EEQMTFKDLVSCTYQLARGMEYLAS 175
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain,
transferase, transferase-transferase inhibito; HET: 07J;
2.80A {Homo sapiens}
Length = 382
Score = 53.1 bits (128), Expect = 2e-08
Identities = 26/144 (18%), Positives = 43/144 (29%), Gaps = 23/144 (15%)
Query: 99 ISLNDLSLHTKISSGPNGDTWRGRWQKNDIVAKILAVR--------NCTPRVSRDFNEEF 150
+ + L L + G G D + + T + D E
Sbjct: 66 LPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEM 125
Query: 151 PKL-RIFSHPNVLPVIGCVNSPPDLVVISQYMAWGSL--------------YALLHEGAG 195
+ I H N++ ++G L VI +Y + G+L
Sbjct: 126 EMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPE 185
Query: 196 IVVDFAQALRFAVDVARGMAFLHS 219
+ + A VARGM +L S
Sbjct: 186 EQLSSKDLVSCAYQVARGMEYLAS 209
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition,
juxtamembrane domain, transferase; 2.10A {Homo sapiens}
SCOP: d.144.1.7
Length = 344
Score = 51.5 bits (124), Expect = 5e-08
Identities = 29/149 (19%), Positives = 46/149 (30%), Gaps = 28/149 (18%)
Query: 99 ISLNDLSLHTKISSGPNGDTWRGRWQ--KNDIVAKILAV----RNCTPRVSRDFNEEFPK 152
+L + SG G V+ +AV E
Sbjct: 42 FPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKM 101
Query: 153 L-RIFSHPNVLPVIGCVNSPPDLVVISQYMAWGSL---------------------YALL 190
+ ++ SH N++ ++G + +I +Y +G L L
Sbjct: 102 MTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLE 161
Query: 191 HEGAGIVVDFAQALRFAVDVARGMAFLHS 219
E V+ F L FA VA+GM FL
Sbjct: 162 EEEDLNVLTFEDLLCFAYQVAKGMEFLEF 190
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain,
kinase inhibitor complex, transferase; HET: 5CN; 1.80A
{Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A*
3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Length = 333
Score = 51.5 bits (124), Expect = 5e-08
Identities = 28/141 (19%), Positives = 46/141 (32%), Gaps = 21/141 (14%)
Query: 99 ISLNDLSLHTKISSGPNGDTWRG------RWQKNDIVA-KILAVRNCTPRVSRDFNEEFP 151
N+L + +G G + VA K+L E
Sbjct: 43 FPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLK-STAHADEKEALMSELK 101
Query: 152 KL-RIFSHPNVLPVIGCVNSPPDLVVISQYMAWGSL------------YALLHEGAGIVV 198
+ + H N++ ++G ++VI++Y +G L A
Sbjct: 102 IMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTA 161
Query: 199 DFAQALRFAVDVARGMAFLHS 219
L F+ VA+GMAFL S
Sbjct: 162 STRDLLHFSSQVAQGMAFLAS 182
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat
protein, ADA protein, ATP-binding, cell cycle, kinase,
nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo
sapiens} PDB: 2wtk_B*
Length = 389
Score = 48.4 bits (115), Expect = 6e-07
Identities = 24/125 (19%), Positives = 51/125 (40%), Gaps = 10/125 (8%)
Query: 106 LHTKISSGPN--GDTWRGR-WQKNDIVA-KILAVRNCTPRVSRDFNEEFPKLRIFSHPNV 161
L T I G R + V + + + C+ + E ++F+HPN+
Sbjct: 29 LLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNI 88
Query: 162 LPVIGCVNSPPDLVVISQYMAWGSLYALLHEGAGIVVD---FAQALRFAVDVARGMAFLH 218
+P + +L V++ +MA+GS L+ ++ A L+ V + + ++H
Sbjct: 89 VPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQ---GVLKALDYIH 145
Query: 219 SLERI 223
+ +
Sbjct: 146 HMGYV 150
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 47.7 bits (113), Expect = 2e-06
Identities = 46/260 (17%), Positives = 81/260 (31%), Gaps = 91/260 (35%)
Query: 10 HGFSPLHW------ACKEGHLKLVEL------LLQRGARVNATNRGDDTPL----HLAAA 53
G + L W + +L + + ++Q V TP +L A
Sbjct: 211 QGLNILEWLENPSNTPDKDYLLSIPISCPLIGVIQLAHYVVTAKLLGFTPGELRSYLKGA 270
Query: 54 HGHL-DIVRLLAV----------QNNQDLTKINFKDQSWLGLKTRSRDATLSRHKGISLN 102
GH +V +A+ + + + F ++G+ R +A + + +
Sbjct: 271 TGHSQGLVTAVAIAETDSWESFFVSVRKAITVLF----FIGV--RCYEAY--PNTSLPPS 322
Query: 103 DLSLHTKISSGPNGDTWRGRWQKNDIVAKILAVRNCTP----RVSRDFNEEFPKLRIFSH 158
L S N + + + +L++ N T N P +
Sbjct: 323 ILE-----DSLENNEG---------VPSPMLSISNLTQEQVQDYVNKTNSHLPAGKQVE- 367
Query: 159 PNVLPVIGCVNSPPDLVVISQYMAWG---SLYAL---LHEG-AGIVVD-----FAQ-ALR 205
I VN +V+S G SLY L L + A +D F++ L+
Sbjct: 368 ------ISLVNG-AKNLVVS-----GPPQSLYGLNLTLRKAKAPSGLDQSRIPFSERKLK 415
Query: 206 FAVDVARGMAFL------HS 219
F FL HS
Sbjct: 416 F------SNRFLPVASPFHS 429
Score = 36.2 bits (83), Expect = 0.009
Identities = 46/274 (16%), Positives = 75/274 (27%), Gaps = 109/274 (39%)
Query: 35 ARVNATNRGDDTPLHLAAAHGH--LDIVRLLAVQNNQDLTKINFKDQSWLGLKTRSR--- 89
A+ + NR D+ H +G LDIV N +LT I+F + G + R
Sbjct: 1642 AQ-DVWNRADN---HFKDTYGFSILDIVI----NNPVNLT-IHFGGEK--GKRIRENYSA 1690
Query: 90 -------DATLSRHKGISLNDLSLHTKISSGPNGD---T--------------WR----- 120
D L K + + G T +
Sbjct: 1691 MIFETIVDGKLKTEKIFKEINEHSTSYTFRSEKGLLSATQFTQPALTLMEKAAFEDLKSK 1750
Query: 121 GRWQKNDIVA-----------------------KILAVR-----NCTPR----------- 141
G + A +++ R PR
Sbjct: 1751 GLIPADATFAGHSLGEYAALASLADVMSIESLVEVVFYRGMTMQVAVPRDELGRSNYGMI 1810
Query: 142 ------VSRDFNEEFPKLRIFSHPNVLPVIGCV------NSPPDLVVISQYMAWGSLYAL 189
V+ F++E L+ V G + N V + G L AL
Sbjct: 1811 AINPGRVAASFSQE--ALQYVVE-RVGKRTGWLVEIVNYNVENQQYVAA-----GDLRAL 1862
Query: 190 LHEGAGIVVDFAQALRFAVDVARGMAFLHSLERI 223
+ V++F + + +D+ L SLE +
Sbjct: 1863 --DTVTNVLNFIKLQK--IDIIELQKSL-SLEEV 1891
Score = 28.1 bits (62), Expect = 3.7
Identities = 44/249 (17%), Positives = 70/249 (28%), Gaps = 80/249 (32%)
Query: 24 LKLVELLLQRGARV-NATNRGDDTP--LHLAAAHGH------LDIVRLLAVQNNQDLTKI 74
K + +L G R A P L + + L I L Q + K
Sbjct: 297 RKAITVLFFIGVRCYEAYPNTSLPPSILEDSLENNEGVPSPMLSISNLTQEQVQDYVNKT 356
Query: 75 N----FKDQSWLGLKTRSRDATLSRHKG--ISLNDLSLHT-KISSGPNGDTWR----GRW 123
N Q + L +++ +S G SL L+L K + D R R
Sbjct: 357 NSHLPAGKQVEISLVNGAKNLVVS---GPPQSLYGLNLTLRKAKAPSGLDQSRIPFSER- 412
Query: 124 QKNDIVAKILAV---------RNCTPRVSRDF---NEEFPK--LRIFSHPNVLPV----- 164
K + L V + +++D N F ++I PV
Sbjct: 413 -KLKFSNRFLPVASPFHSHLLVPASDLINKDLVKNNVSFNAKDIQI-------PVYDTFD 464
Query: 165 -----IGCVNSPPDLV--VISQYMAW----------------------GSLYALLHEGAG 195
+ + +V +I + W G L +G G
Sbjct: 465 GSDLRVLSGSISERIVDCIIRLPVKWETTTQFKATHILDFGPGGASGLGVLTHRNKDGTG 524
Query: 196 IVVDFAQAL 204
+ V A L
Sbjct: 525 VRVIVAGTL 533
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain,
kinase, transferase-transferase inhibitor COM; HET: 42Q;
1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A*
3hng_A*
Length = 359
Score = 45.7 bits (108), Expect = 5e-06
Identities = 24/138 (17%), Positives = 44/138 (31%), Gaps = 13/138 (9%)
Query: 99 ISLNDLSLHTKISSGPNGDTWRGRW-------QKNDIVAKILAVRNCTPRVSRDFNEEFP 151
+ L L + G G + K+L T R E
Sbjct: 19 FPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLK-EGATHSEHRALMSELK 77
Query: 152 KL-RIFSHPNVLPVIGCVNSPPD-LVVISQYMAWGSLYALLHEGAGIVVDFAQALRFAVD 209
L I H NV+ ++G P L+VI ++ +G+L L V +
Sbjct: 78 ILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKT---KGAR 134
Query: 210 VARGMAFLHSLERIIPQY 227
+G ++ ++ + +
Sbjct: 135 FRQGKDYVGAIPVDLKRR 152
Score = 29.5 bits (66), Expect = 0.85
Identities = 9/62 (14%), Positives = 21/62 (33%)
Query: 158 HPNVLPVIGCVNSPPDLVVISQYMAWGSLYALLHEGAGIVVDFAQALRFAVDVARGMAFL 217
+ + +S V + ++ + + + ++ VA+GM FL
Sbjct: 150 KRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFL 209
Query: 218 HS 219
S
Sbjct: 210 AS 211
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine
kinase, transferase; 1.80A {Rattus norvegicus} SCOP:
d.144.1.7 PDB: 3fpq_A
Length = 290
Score = 43.9 bits (104), Expect = 2e-05
Identities = 26/117 (22%), Positives = 46/117 (39%), Gaps = 8/117 (6%)
Query: 109 KISSGPNGDTWRGR-WQKNDIVA-KILAVRNCTPRVSRDFNEEFPKLRIFSHPNVLPVIG 166
+I G ++G + VA L R T + F EE L+ HPN++
Sbjct: 33 EIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYD 92
Query: 167 C----VNSPPDLVVISQYMAWGSLYALLHEGAGIVVDFAQALRFAVDVARGMAFLHS 219
V +V++++ M G+L L V+ + + +G+ FLH+
Sbjct: 93 SWESTVKGKKCIVLVTELMTSGTLKTYLKRFK--VMKIKVLRSWCRQILKGLQFLHT 147
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein
kinase, transferase; HET: SEP TPO ANP; 2.20A
{Arabidopsis thaliana} PDB: 3tl8_A*
Length = 326
Score = 42.6 bits (101), Expect = 5e-05
Identities = 35/129 (27%), Positives = 60/129 (46%), Gaps = 11/129 (8%)
Query: 100 SLNDLSLHT-------KISSGPNGDTWRGRWQKNDIVA-KILAVRNCTPRVSRDFNEEFP 151
SL +L + + + G G ++GR +VA K L T F E
Sbjct: 21 SLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLK-EERTQGGELQFQTEVE 79
Query: 152 KLRIFSHPNVLPVIGCVNSPPDLVVISQYMAWGSLYALLHE--GAGIVVDFAQALRFAVD 209
+ + H N+L + G +P + +++ YMA GS+ + L E + +D+ + R A+
Sbjct: 80 MISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALG 139
Query: 210 VARGMAFLH 218
ARG+A+LH
Sbjct: 140 SARGLAYLH 148
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension,
transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Length = 303
Score = 42.3 bits (100), Expect = 5e-05
Identities = 24/133 (18%), Positives = 50/133 (37%), Gaps = 9/133 (6%)
Query: 99 ISLNDLSLHTKISSGPNGDTWRGR-WQKNDIVA-KILAVRNCTPRVSRDFNEEFPKLRIF 156
I+ +D L I SG K + VA K + + C + + +E +
Sbjct: 12 INRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMD-ELLKEIQAMSQC 70
Query: 157 SHPNVLPVIGCVNSPPDLVVISQYMAWGSLYALLHEGAGIVVDFAQALRFAV------DV 210
HPN++ +L ++ + ++ GS+ ++ + L + +V
Sbjct: 71 HHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREV 130
Query: 211 ARGMAFLHSLERI 223
G+ +LH +I
Sbjct: 131 LEGLEYLHKNGQI 143
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex,
layered beta- sheets, transferas; HET: SEP TPO; 3.20A
{Solanum pimpinellifolium} PDB: 3hgk_A*
Length = 321
Score = 41.8 bits (99), Expect = 8e-05
Identities = 22/83 (26%), Positives = 43/83 (51%), Gaps = 3/83 (3%)
Query: 144 RDFNEEFPKLRIFSHPNVLPVIGCVNSPPDLVVISQYMAWGSLYALLH--EGAGIVVDFA 201
+F E L HP+++ +IG + ++++I +YM G+L L+ + + + +
Sbjct: 80 EEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWE 139
Query: 202 QALRFAVDVARGMAFLHSLERII 224
Q L + ARG+ +LH+ II
Sbjct: 140 QRLEICIGAARGLHYLHT-RAII 161
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast);
two-LOBE protein kinase fold, ATP-binding, nucleotid
binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens}
PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A*
3ggf_A* 2xik_A*
Length = 303
Score = 40.8 bits (96), Expect = 2e-04
Identities = 31/117 (26%), Positives = 50/117 (42%), Gaps = 6/117 (5%)
Query: 109 KISSGPNGDTWRGRWQK-NDIVA-KILAVRNCTPRVSRDFNEEFPKLRIFSHPNVLPVIG 166
KI G G+ ++G + +VA KI+ + + D +E L P V G
Sbjct: 29 KIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIE-DIQQEITVLSQCDSPYVTKYYG 87
Query: 167 CVNSPPDLVVISQYMAWGSLYALLHEGAGIVVDFAQALRFAVDVARGMAFLHSLERI 223
L +I +Y+ GS LL G A LR ++ +G+ +LHS ++I
Sbjct: 88 SYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILR---EILKGLDYLHSEKKI 141
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK,
transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB:
2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Length = 307
Score = 40.6 bits (96), Expect = 2e-04
Identities = 20/81 (24%), Positives = 35/81 (43%), Gaps = 1/81 (1%)
Query: 144 RDFNEEFPKLRIFSHPNVLPVIGCVNSPPDLVVISQYMAWGSL-YALLHEGAGIVVDFAQ 202
+ F++E + H N++ ++G + DL ++ YM GSL L + +
Sbjct: 75 QQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHM 134
Query: 203 ALRFAVDVARGMAFLHSLERI 223
+ A A G+ FLH I
Sbjct: 135 RCKIAQGAANGINFLHENHHI 155
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein
serine/threonine kinase, S based drug design, MAP3K14,
transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A*
4g3c_A 4dn5_A*
Length = 336
Score = 38.6 bits (90), Expect = 0.001
Identities = 20/84 (23%), Positives = 37/84 (44%), Gaps = 3/84 (3%)
Query: 141 RVSRDFNEEFPKLRIFSHPNVLPVIGCVNSPPDLVVISQYMAWGSLYALLHEGAGIVVDF 200
R+ EE S P ++P+ G V P + + + + GSL L+ + +
Sbjct: 92 RLEVFRVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCL--PE 149
Query: 201 AQALRFAVDVARGMAFLHSLERII 224
+AL + G+ +LH+ RI+
Sbjct: 150 DRALYYLGQALEGLEYLHT-RRIL 172
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas;
spindle assembly checkpoint, mitosis, kinase,
activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo
sapiens}
Length = 365
Score = 37.3 bits (86), Expect = 0.003
Identities = 14/133 (10%), Positives = 42/133 (31%), Gaps = 8/133 (6%)
Query: 99 ISLNDLSLHTKISSGPNGDTWRGRWQ--KNDIVAKILAVRNCTPRVSRDF---NEEFPKL 153
+ + +H + G + + + ++ P +F + +L
Sbjct: 62 LGSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPANPWEFYIGTQLMERL 121
Query: 154 RIFSHPNVLPVIGCVNSPPDLVVISQYMAWGSLYALLHE---GAGIVVDFAQALRFAVDV 210
+ + V++ + ++G+L ++ V+ + FA+ +
Sbjct: 122 KPSMQHMFMKFYSAHLFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRM 181
Query: 211 ARGMAFLHSLERI 223
+ +H E I
Sbjct: 182 LYMIEQVHDCEII 194
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding,
phosphorylation, allosteric enzyme, alternative
splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A
{Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A*
1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Length = 297
Score = 36.5 bits (85), Expect = 0.004
Identities = 27/117 (23%), Positives = 49/117 (41%), Gaps = 7/117 (5%)
Query: 109 KISSGPNGDTWRGRWQK-NDIVA-KILAVRNCTPRVSRDFNEEFPKLRIFSHPNVLPVIG 166
KI G +G + VA + + ++ P+ NE +R +PN++ +
Sbjct: 27 KIGQGASGTVYTAMDVATGQEVAIRQMNLQQ-QPKKELIINE-ILVMRENKNPNIVNYLD 84
Query: 167 CVNSPPDLVVISQYMAWGSLYALLHEGAGIVVDFAQALRFAVDVARGMAFLHSLERI 223
+L V+ +Y+A GSL ++ E A R + + + FLHS + I
Sbjct: 85 SYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCR---ECLQALEFLHSNQVI 138
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding,
transferase, nucleotide-binding; HET: SEP; 1.6A {Homo
sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A*
2bva_A*
Length = 321
Score = 36.6 bits (85), Expect = 0.004
Identities = 27/117 (23%), Positives = 47/117 (40%), Gaps = 7/117 (5%)
Query: 109 KISSGPNGDTWRGR-WQKNDIVA-KILAVRNCTPRVSRDFNEEFPKLRIFSHPNVLPVIG 166
KI G G R VA K++ +R R FNE +R + H NV+ +
Sbjct: 52 KIGEGSTGIVCLAREKHSGRQVAVKMMDLRK-QQRRELLFNE-VVIMRDYQHFNVVEMYK 109
Query: 167 CVNSPPDLVVISQYMAWGSLYALLHEGAGIVVDFAQALRFAVDVARGMAFLHSLERI 223
+L V+ +++ G+L ++ + A V + +A+LH+ I
Sbjct: 110 SYLVGEELWVLMEFLQGGALTDIVSQVRLNEEQIATVCE---AVLQALAYLHAQGVI 163
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB
structural genomics consortium, TBSG fold, FHAA,
transferase; 2.26A {Mycobacterium tuberculosis} PDB:
3oun_B* 3otv_A 3ouk_A
Length = 286
Score = 36.3 bits (84), Expect = 0.005
Identities = 20/116 (17%), Positives = 38/116 (32%), Gaps = 7/116 (6%)
Query: 106 LHTKISSGPNGDTWRGRWQKND-IVA-KILAVR-NCTPRVSRDFNEEFPKLRIFSHPNVL 162
L P W+ D VA + + V ++ +L P V
Sbjct: 35 LLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVA 94
Query: 163 PVIGCVNSPPDLVVISQYMAWGSLYALLHEGAGIVVDFAQALRFAVDVARGMAFLH 218
V+ V++ +V+++++ GSL + A+R +A H
Sbjct: 95 RVLDVVHTRAGGLVVAEWIRGGSLQEVADTS----PSPVGAIRAMQSLAAAADAAH 146
>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo
sapiens}
Length = 350
Score = 36.2 bits (84), Expect = 0.005
Identities = 21/127 (16%), Positives = 44/127 (34%), Gaps = 3/127 (2%)
Query: 100 SLNDLSLHTKISSGPNGDTWRGR-WQKNDIVA-KILAVRNCTPRVSRDFNEEFPKLRIFS 157
S+ KI G G + + K + + + + + E L
Sbjct: 22 SMEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMK 81
Query: 158 HPNVLPVIGCVNSPPDLVVISQYMAWGSLYALLHEGAGIVVDFAQALRFAVDVARGMAFL 217
HPN++ L ++ Y G L+ ++ G++ Q L + V + + +
Sbjct: 82 HPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHV 141
Query: 218 HSLERII 224
H +I+
Sbjct: 142 HD-RKIL 147
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase,
ATP-binding, disease mutation, nucleoti binding,
phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB:
3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A*
2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A*
3orn_A* 3os3_A* 3sls_A* 1s9i_A*
Length = 360
Score = 35.2 bits (81), Expect = 0.015
Identities = 26/162 (16%), Positives = 63/162 (38%), Gaps = 15/162 (9%)
Query: 69 QDLTKINFKDQSWLGLKTRSRDATLSRHKG----ISLNDLSLHTKISSGPNGDTWRGRWQ 124
+ L ++ +Q R R K + +D +++ +G G ++ +
Sbjct: 2 KKLEELELDEQQ------RKRLEAFLTQKQKVGELKDDDFEKISELGAGNGGVVFKVSHK 55
Query: 125 K-NDIVA-KILAVRNCTPRVSRDFNEEFPKLRIFSHPNVLPVIGCVNSPPDLVVISQYMA 182
++A K++ + P + E L + P ++ G S ++ + ++M
Sbjct: 56 PSGLVMARKLIHL-EIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMD 114
Query: 183 WGSLYALLHEGAGIVVDFAQALRFAVDVARGMAFLHSLERII 224
GSL +L + I + ++ V +G+ +L +I+
Sbjct: 115 GGSLDQVLKKAGRIPEQILGKV--SIAVIKGLTYLREKHKIM 154
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase,
transferase; HET: ANP; 2.60A {Plasmodium falciparum}
PDB: 2pmn_X* 2pmo_X*
Length = 348
Score = 34.7 bits (80), Expect = 0.021
Identities = 9/78 (11%), Positives = 25/78 (32%), Gaps = 6/78 (7%)
Query: 153 LRIFSHPNVLPVIGCVNSPPDLVVISQYMAWGSLYALL------HEGAGIVVDFAQALRF 206
+ + L G + + ++ +I +YM S+ + +
Sbjct: 97 ITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCI 156
Query: 207 AVDVARGMAFLHSLERII 224
V +++H+ + I
Sbjct: 157 IKSVLNSFSYIHNEKNIC 174
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase,
metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Length = 295
Score = 33.8 bits (78), Expect = 0.030
Identities = 18/82 (21%), Positives = 37/82 (45%), Gaps = 2/82 (2%)
Query: 144 RDFNEEFPKLRIFSHPNVLPVIGCVNSPPDLVVISQYMAWGSLYALLHEGAGIVVDFAQA 203
+ +EE + H N++ +G + + + + + GSL ALL G + D Q
Sbjct: 64 QPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQT 123
Query: 204 LR-FAVDVARGMAFLHSLERII 224
+ + + G+ +LH +I+
Sbjct: 124 IGFYTKQILEGLKYLHD-NQIV 144
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI,
structural genomics, protein structure initiative; HET:
TPO; 2.20A {Homo sapiens}
Length = 314
Score = 33.5 bits (77), Expect = 0.052
Identities = 23/123 (18%), Positives = 52/123 (42%), Gaps = 11/123 (8%)
Query: 105 SLHTKISSGPNGDTWRGRWQK-NDIVA-KILAVRNCTPRVSRDFNEEFPKLRIFSHPNVL 162
+ K+ G G ++ ++ IVA K + V + ++ +E ++ P+V+
Sbjct: 32 DVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES----DLQEIIKEISIMQQCDSPHVV 87
Query: 163 PVIGCVNSPPDLVVISQYMAWGSLYALLHEGAGIVVDF--AQALRFAVDVARGMAFLHSL 220
G DL ++ +Y GS+ ++ + + A L+ +G+ +LH +
Sbjct: 88 KYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQ---STLKGLEYLHFM 144
Query: 221 ERI 223
+I
Sbjct: 145 RKI 147
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 33.3 bits (75), Expect = 0.071
Identities = 25/178 (14%), Positives = 50/178 (28%), Gaps = 55/178 (30%)
Query: 7 TDDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLH---------LAAAHGHL 57
D+ F+ + + + +LKL + LL+ + + +A
Sbjct: 121 NDNQVFAKYNVSRLQPYLKLRQALLE-------LRPAKNVLIDGVLGSGKTWVALD---- 169
Query: 58 DIVRLLAVQNNQDLTKINFKDQSWLGLKTRSRDATLSRHKGISLNDLSLHTKISSGPNGD 117
+ + K++FK WL LK + T+ L L + D
Sbjct: 170 ------VCLSYKVQCKMDFK-IFWLNLKNCNSPETVLEM----LQKLLYQIDPNWTSRSD 218
Query: 118 TWRGRWQKNDIVAKILAVRNCTPRVSRDFNEEFPKLRIF----SHPNVLPVIGCVNSP 171
+ + + +LR + N L V+ V +
Sbjct: 219 H--------------------SSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNA 256
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism,
metal-binding, cell cycle kinase, mitosis, cytoplasm,
magnesium, transferase; 2.10A {Homo sapiens} PDB:
2wqn_A*
Length = 310
Score = 32.7 bits (75), Expect = 0.075
Identities = 18/114 (15%), Positives = 39/114 (34%), Gaps = 6/114 (5%)
Query: 116 GDTWRGR-WQKNDIVA--KILAVRNCTPRVSRDFNEEFPKLRIFSHPNVLPVIGCVNSPP 172
+ +R VA K+ + D +E L+ +HPNV+
Sbjct: 46 SEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDN 105
Query: 173 DLVVISQYMAWGSLYALLHEGAGIVVDF--AQALRFAVDVARGMAFLHSLERII 224
+L ++ + G L ++ ++ V + + +HS R++
Sbjct: 106 ELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHS-RRVM 158
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell
cycle progression, phosphorylation, disease mutation,
nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB:
4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Length = 302
Score = 32.7 bits (75), Expect = 0.090
Identities = 20/119 (16%), Positives = 50/119 (42%), Gaps = 9/119 (7%)
Query: 109 KISSGPNGDTWRGRWQK-NDIVA-KILAVRNCTPRVSRDFNEEFPKLRIFSHPNVLPVIG 166
++ G G ++ + ++ + A K++ ++ + D+ E L HP ++ ++G
Sbjct: 26 ELGDGAFGKVYKAKNKETGALAAAKVIETKS-EEELE-DYIVEIEILATCDHPYIVKLLG 83
Query: 167 CVNSPPDLVVISQYMAWGSLYALLHEGAGIVVDF--AQALRFAVDVARGMAFLHSLERI 223
L ++ ++ G++ A++ E + + R + + FLHS I
Sbjct: 84 AYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCR---QMLEALNFLHSKRII 139
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK,
STK18, PSI, structural genomics, protein structure
initiative; HET: ANP; 2.25A {Homo sapiens}
Length = 278
Score = 32.1 bits (74), Expect = 0.13
Identities = 12/67 (17%), Positives = 24/67 (35%), Gaps = 1/67 (1%)
Query: 153 LRIFSHPNVLPVIGCVNSPPDLVVISQYMAWGSLYALLHEGAGIVVDFAQALRFAVDVAR 212
HP++L + + ++ + G + L + +A F +
Sbjct: 65 HCQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSE-NEARHFMHQIIT 123
Query: 213 GMAFLHS 219
GM +LHS
Sbjct: 124 GMLYLHS 130
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition
state, activation helix, serine/threonine-PR kinase;
HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Length = 340
Score = 32.0 bits (73), Expect = 0.15
Identities = 25/138 (18%), Positives = 50/138 (36%), Gaps = 21/138 (15%)
Query: 99 ISLNDLSLHTKISSGPNGDTWRGRWQKNDIVAKILAVRNCTPRVSRDFNEEFPK------ 152
+ +DL ++ G G + R + +I+AV+ R+ N + K
Sbjct: 48 VKADDLEPIMELGRGAYGVVEKMRHVPSG---QIMAVK----RIRATVNSQEQKRLLMDL 100
Query: 153 ---LRIFSHPNVLPVIGCVNSPPDLVVISQYMAWGSL---YALLHEGAGIVVDFAQALRF 206
+R P + G + D+ + + M SL Y + + + +
Sbjct: 101 DISMRTVDCPFTVTFYGALFREGDVWICMELMD-TSLDKFYKQVIDKGQ-TIPEDILGKI 158
Query: 207 AVDVARGMAFLHSLERII 224
AV + + + LHS +I
Sbjct: 159 AVSIVKALEHLHSKLSVI 176
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding,
lipoprotein, myristate, PA phosphorylation; HET: STU;
2.6A {Homo sapiens}
Length = 317
Score = 31.6 bits (72), Expect = 0.18
Identities = 13/73 (17%), Positives = 31/73 (42%), Gaps = 6/73 (8%)
Query: 153 LRIFSHPNVLPVIGC----VNSPPDLVVISQYMAWGSLYALLHEGAGIVVDF--AQALRF 206
R+F+HPN+L ++ + + ++ + G+L+ + Q L
Sbjct: 80 HRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWL 139
Query: 207 AVDVARGMAFLHS 219
+ + RG+ +H+
Sbjct: 140 LLGICRGLEAIHA 152
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7,
activated mutant, ATP-binding, structural genomics,
NPPSFA; 2.45A {Homo sapiens}
Length = 318
Score = 30.8 bits (70), Expect = 0.32
Identities = 24/135 (17%), Positives = 50/135 (37%), Gaps = 18/135 (13%)
Query: 99 ISLNDLSLHTKISSGPNGDTWRGRWQKNDIVAKILAVRNCTPRVSRDFNEEFPK------ 152
+NDL ++ SG G W+ R++K ++AV+ ++ R N+E K
Sbjct: 22 AEINDLENLGEMGSGTCGQVWKMRFRKTG---HVIAVK----QMRRSGNKEENKRILMDL 74
Query: 153 ---LRIFSHPNVLPVIGCVNSPPDLVVISQYMAWGSLYALLHEGAGIVVDFAQALRFAVD 209
L+ P ++ G + D+ + + M + I + V
Sbjct: 75 DVVLKSHDCPYIVQCFGTFITNTDVFIAMELMGTCAEKLKKRMQGPIPERILGKM--TVA 132
Query: 210 VARGMAFLHSLERII 224
+ + + +L +I
Sbjct: 133 IVKALYYLKEKHGVI 147
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A
{Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Length = 348
Score = 30.5 bits (69), Expect = 0.46
Identities = 27/120 (22%), Positives = 47/120 (39%), Gaps = 9/120 (7%)
Query: 109 KISSGPNGDTWRGRWQK-NDIVA-KILAVRNCTPRVS-RDFNEEFPKLRIFSHPNVLPVI 165
+I G G + R + +++VA K ++ +D +E L+ HPN +
Sbjct: 61 EIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYR 120
Query: 166 GCVNSPPDLVVISQYMAWGSLYALLHEGAGIVVDF--AQALRFAVDVARGMAFLHSLERI 223
GC ++ +Y GS LL + + A +G+A+LHS I
Sbjct: 121 GCYLREHTAWLVMEYCL-GSASDLLEVHKKPLQEVEIAAVTH---GALQGLAYLHSHNMI 176
>3uo9_A Glutaminase kidney isoform, mitochondrial; hydrolase-hydrolase
inhibitor complex; HET: 04A; 2.30A {Homo sapiens} PDB:
3unw_A* 3ss3_A 3ss4_A 3ss5_A*
Length = 534
Score = 30.1 bits (67), Expect = 0.66
Identities = 9/49 (18%), Positives = 17/49 (34%), Gaps = 1/49 (2%)
Query: 8 DDHGFSPLHWACKEGHLKLVELLLQRGARVNATNRGDDTPLHLAAAHGH 56
H F PL + + L L E + + + T ++ + G
Sbjct: 479 QRHSFGPLDYESLQQELALKETVW-KKVSPESNEDISTTVVYRMESLGE 526
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370,
Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2;
2.00A {Bacteroides thetaiotaomicron}
Length = 227
Score = 29.3 bits (66), Expect = 1.0
Identities = 10/36 (27%), Positives = 15/36 (41%), Gaps = 3/36 (8%)
Query: 26 LVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVR 61
L+ L RG V A R P + + HL + +
Sbjct: 20 LLNEALNRGFEVTAVVR---HPEKIKIENEHLKVKK 52
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics,
midwest center for structural genomics, protein
structure initiative; 2.00A {Streptomyces avermitilis}
Length = 281
Score = 29.2 bits (66), Expect = 1.1
Identities = 10/41 (24%), Positives = 15/41 (36%), Gaps = 4/41 (9%)
Query: 26 LVELLLQRGARVNATNRGDDTPLHLAAAHGHLDIVRLLAVQ 66
+ E + G V T R + L AA+ R A+
Sbjct: 21 IAEAAVAAGDTVIGTARRTEALDDLVAAYPD----RAEAIS 57
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP
complex, transferase; HET: ANP; 2.30A {Homo sapiens}
PDB: 3alo_A*
Length = 327
Score = 29.2 bits (66), Expect = 1.3
Identities = 18/130 (13%), Positives = 41/130 (31%), Gaps = 4/130 (3%)
Query: 99 ISLNDLSLHTKISSGPNGDTWRGRWQK-NDIVA-KILAVRNCTPRVSRDFNEEFPKLRIF 156
+ DL +I G G + + I+A K + + + +R
Sbjct: 19 FTAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSS 78
Query: 157 SHPNVLPVIGCVNSPPDLVVISQYMAWGS--LYALLHEGAGIVVDFAQALRFAVDVARGM 214
P ++ G + D + + M+ Y ++ V+ + + + +
Sbjct: 79 DCPYIVQFYGALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKAL 138
Query: 215 AFLHSLERII 224
L +II
Sbjct: 139 NHLKENLKII 148
>3t76_A VANU, transcriptional regulator vanug; structural genomics, center
for structural genomics of infec diseases, csgid; HET:
MSE; 1.12A {Enterococcus faecalis} PDB: 3t75_A* 3tyr_A*
3tys_A*
Length = 88
Score = 27.4 bits (61), Expect = 1.3
Identities = 5/44 (11%), Positives = 12/44 (27%)
Query: 97 KGISLNDLSLHTKISSGPNGDTWRGRWQKNDIVAKILAVRNCTP 140
+ + +L +S + ++ I NC
Sbjct: 36 RDMKKGELREAVGVSKSTFAKLGKNENVSLTVLLAICEYLNCDF 79
>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid,
plant protein; 1.40A {Medicago sativa}
Length = 322
Score = 28.7 bits (65), Expect = 1.5
Identities = 11/43 (25%), Positives = 16/43 (37%), Gaps = 7/43 (16%)
Query: 26 LVELLLQRGARVNATNRGDDTP-------LHLAAAHGHLDIVR 61
+++ LL+ G VN T R D +L A L
Sbjct: 17 IIKSLLENGYSVNTTIRADPERKRDVSFLTNLPGASEKLHFFN 59
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated,
transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A*
2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Length = 362
Score = 28.1 bits (63), Expect = 2.5
Identities = 11/57 (19%), Positives = 22/57 (38%)
Query: 130 AKILAVRNCTPRVSRDFNEEFPKLRIFSHPNVLPVIGCVNSPPDLVVISQYMAWGSL 186
AKI+ + + R + E R HPN++ + + ++ + G L
Sbjct: 59 AKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGEL 115
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant,
structural genomics consortium, SCG, binding,
nucleotide-binding, phosphoprotein; HET: STU; 2.26A
{Homo sapiens} PDB: 3enm_A
Length = 290
Score = 28.0 bits (63), Expect = 2.7
Identities = 25/138 (18%), Positives = 50/138 (36%), Gaps = 21/138 (15%)
Query: 99 ISLNDLSLHTKISSGPNGDTWRGRWQKNDIVAKILAVRNCTPRVSRDFNEEFPK------ 152
+ +DL ++ G G + R + +I+AV+ R+ N + K
Sbjct: 4 VKADDLEPIMELGRGAYGVVEKMRHVPSG---QIMAVK----RIRATVNSQEQKRLLMDL 56
Query: 153 ---LRIFSHPNVLPVIGCVNSPPDLVVISQYMAWGSL---YALLHEGAGIVVDFAQALRF 206
+R P + G + D+ + + M SL Y + + + +
Sbjct: 57 DISMRTVDCPFTVTFYGALFREGDVWICMELMD-TSLDKFYKQVIDKGQ-TIPEDILGKI 114
Query: 207 AVDVARGMAFLHSLERII 224
AV + + + LHS +I
Sbjct: 115 AVSIVKALEHLHSKLSVI 132
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding,
nucleotide-binding, serine/threonine-protein kinase,
transferase; HET: TPO; 1.72A {Caenorhabditis elegans}
PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Length = 284
Score = 27.9 bits (63), Expect = 3.1
Identities = 11/57 (19%), Positives = 22/57 (38%)
Query: 130 AKILAVRNCTPRVSRDFNEEFPKLRIFSHPNVLPVIGCVNSPPDLVVISQYMAWGSL 186
AKI+ + + R + E R HPN++ + + ++ + G L
Sbjct: 36 AKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGEL 92
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors,
virtual screening, X-RAY CO- crystal analysis,
structure-based drug design (SBDD); HET: MMH; 1.90A
{Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A*
2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A*
3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A*
3lau_A* 2wtv_A* ...
Length = 279
Score = 27.6 bits (62), Expect = 3.2
Identities = 14/67 (20%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Query: 153 LRIFSHPNVLPVIGCVNSPPDLVVISQYMAWGSLYALLHEGAGIVVDFAQALRFAVDVAR 212
HPN+L + G + + +I +Y G++Y L + + D + + ++A
Sbjct: 63 QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKF--DEQRTATYITELAN 120
Query: 213 GMAFLHS 219
+++ HS
Sbjct: 121 ALSYCHS 127
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding,
serine/threonine-protein kinase, ATP-binding,
transferase, coiled coil, cell division, kinase; HET:
TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A*
3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A*
3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A*
2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Length = 284
Score = 27.6 bits (62), Expect = 3.5
Identities = 13/68 (19%), Positives = 27/68 (39%), Gaps = 4/68 (5%)
Query: 153 LRIFSHPNVLPVIGCVNSPPDLVVISQYMAWGSLYALL-HEGAGIVVDFAQALRFAVDVA 211
HPN+L + + + ++ ++ G LY L G D ++ F ++A
Sbjct: 68 QSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGR---FDEQRSATFMEELA 124
Query: 212 RGMAFLHS 219
+ + H
Sbjct: 125 DALHYCHE 132
>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase
reductase, NADPH, dihydroquercetin, rossmann fold,
oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera}
PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*
Length = 337
Score = 27.6 bits (62), Expect = 4.0
Identities = 14/42 (33%), Positives = 17/42 (40%), Gaps = 6/42 (14%)
Query: 26 LVELLLQRGARVNAT----NRGDDTP--LHLAAAHGHLDIVR 61
LV LL+RG V AT L L A HL + +
Sbjct: 21 LVMRLLERGYTVRATVRDPTNVKKVKHLLDLPKAETHLTLWK 62
>3go6_A Ribokinase RBSK; phosphofructokinase, carbohydrate kinase,
transferase; HET: RIB ADP; 1.98A {Mycobacterium
tuberculosis} PDB: 3go7_A*
Length = 310
Score = 27.2 bits (61), Expect = 4.6
Identities = 8/28 (28%), Positives = 10/28 (35%)
Query: 184 GSLYALLHEGAGIVVDFAQALRFAVDVA 211
G L A G + +ALR A
Sbjct: 252 GVLAANWPRNPGSPAERLRALRRACAAG 279
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET:
YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A*
2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A*
2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A*
2x8i_A* 2xey_A* 2xez_A* ...
Length = 276
Score = 27.2 bits (61), Expect = 4.7
Identities = 17/104 (16%), Positives = 35/104 (33%), Gaps = 26/104 (25%)
Query: 129 VA-KIL---AVRNCTPRVSRDFNEEFPKLRIFSHPNVLPVIGCVNSPPDLVVISQYMAWG 184
VA KI+ +C + + E ++ +H NV+ G + +Y + G
Sbjct: 35 VAVKIVDMKRAVDCPENIKK----EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGG 90
Query: 185 SLYALLHEGAGIVVDFAQALRFAVDVAR--------GMAFLHSL 220
L+ + + A+ G+ +LH +
Sbjct: 91 ELFDRI----------EPDIGMPEPDAQRFFHQLMAGVVYLHGI 124
>1ao0_A Glutamine phosphoribosylpyrophosphate amidotransferase; glutamine
amidotransferase, prtase, purine biosynthesis,
phosphoribosyltransferase; HET: 5GP ADP; 2.80A {Bacillus
subtilis} SCOP: c.61.1.1 d.153.1.1 PDB: 1gph_1*
Length = 459
Score = 27.4 bits (62), Expect = 5.1
Identities = 13/47 (27%), Positives = 17/47 (36%), Gaps = 20/47 (42%)
Query: 155 IFSHPNVLPVIGCVNSPPDLVVISQYMAWGSLYALLH---EGAGIVV 198
I+ H Q +G L++L H EGAGIV
Sbjct: 6 IWGHEEA----------------PQITYYG-LHSLQHRGQEGAGIVA 35
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET:
NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2
c.2.1.1
Length = 371
Score = 27.1 bits (61), Expect = 5.1
Identities = 10/26 (38%), Positives = 13/26 (50%)
Query: 173 DLVVISQYMAWGSLYALLHEGAGIVV 198
DL+V Q L HEG+GI+
Sbjct: 47 DLIVRDQKYPVPLPAVLGHEGSGIIE 72
>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain
dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis
vinifera} PDB: 3hfs_A
Length = 338
Score = 27.2 bits (61), Expect = 5.6
Identities = 11/17 (64%), Positives = 13/17 (76%)
Query: 26 LVELLLQRGARVNATNR 42
LV+LLLQ+G VN T R
Sbjct: 25 LVKLLLQKGYAVNTTVR 41
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1,
selectivity residues, POLO-like K structure based drug
design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo
sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A*
3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A*
3db6_A* 3dbe_A* 3dbf_A*
Length = 294
Score = 27.2 bits (61), Expect = 5.7
Identities = 12/67 (17%), Positives = 23/67 (34%), Gaps = 2/67 (2%)
Query: 153 LRIFSHPNVLPVIGCVNSPPDLVVISQYMAWGSLYALLHEGAGIVVDFAQALRFAVDVAR 212
R +H +V+ G + V+ + SL L + A+ + +
Sbjct: 69 HRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEAR--YYLRQIVL 126
Query: 213 GMAFLHS 219
G +LH
Sbjct: 127 GCQYLHR 133
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling,
transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A
3zuu_A 3uc4_A 3ujg_A 3udb_A
Length = 361
Score = 26.9 bits (60), Expect = 6.1
Identities = 20/76 (26%), Positives = 33/76 (43%), Gaps = 18/76 (23%)
Query: 153 LRIFSHPNVLPVIGCVNSPPDLVVISQYMAWGSLYALLHEGAGIVVDFAQALRFAVDVAR 212
R HPN++ + +P L +I +Y + G LY + A RF+ D AR
Sbjct: 70 HRSLRHPNIVRFKEVILTPTHLAIIMEYASGGELYERI----------CNAGRFSEDEAR 119
Query: 213 --------GMAFLHSL 220
G+++ HS+
Sbjct: 120 FFFQQLLSGVSYCHSM 135
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like
kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB:
2ou7_A* 3fc2_A* 3thb_A*
Length = 335
Score = 26.9 bits (60), Expect = 7.2
Identities = 12/67 (17%), Positives = 23/67 (34%), Gaps = 2/67 (2%)
Query: 153 LRIFSHPNVLPVIGCVNSPPDLVVISQYMAWGSLYALLHEGAGIVVDFAQALRFAVDVAR 212
R +H +V+ G + V+ + SL L + A+ + +
Sbjct: 95 HRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEAR--YYLRQIVL 152
Query: 213 GMAFLHS 219
G +LH
Sbjct: 153 GCQYLHR 159
>2a19_B Interferon-induced, double-stranded RNA-activated kinase;
transferase, protein biosynthesis, protein synthesis
transferase complex; HET: TPO ANP; 2.50A {Homo sapiens}
PDB: 2a1a_B*
Length = 284
Score = 26.5 bits (59), Expect = 7.6
Identities = 14/88 (15%), Positives = 31/88 (35%), Gaps = 17/88 (19%)
Query: 153 LRIFSHPNV----------------LPVIGCVNSPPDLVVISQYMAWGSLYALLHEGAGI 196
L H N+ + L + ++ G+L + + G
Sbjct: 58 LAKLDHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGE 117
Query: 197 VVDFAQALRFAVDVARGMAFLHSLERII 224
+D AL + +G+ ++HS +++I
Sbjct: 118 KLDKVLALELFEQITKGVDYIHS-KKLI 144
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase,
nucleus, meiosis, mitosis, cytoplasm, metal-binding,
phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB:
2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A*
2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A*
4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Length = 279
Score = 26.5 bits (59), Expect = 7.6
Identities = 19/98 (19%), Positives = 33/98 (33%), Gaps = 10/98 (10%)
Query: 129 VAKILAVRNCTPRVSRDFNEEFPKLRIFSHPNVLPVIGCVNSPPD-----LVVISQYMAW 183
V K L + T + E LR HPN ++ + D L ++ +Y
Sbjct: 35 VWKELDYGSMTEAEKQMLVSEVNLLRELKHPN---IVRYYDRIIDRTNTTLYIVMEYCEG 91
Query: 184 GSLYALLHEGAGIVVDF--AQALRFAVDVARGMAFLHS 219
G L +++ +G LR + + H
Sbjct: 92 GDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHR 129
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase,
CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo
sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A*
2wb8_A
Length = 336
Score = 26.4 bits (57), Expect = 9.2
Identities = 19/95 (20%), Positives = 35/95 (36%), Gaps = 3/95 (3%)
Query: 99 ISLNDLSLHTKISSGPNGDTWRGRWQKNDIVAKILAVRNCTPRVS---RDFNEEFPKLRI 155
+ L KI G G+ ++ + KI+A+ + F E P++ I
Sbjct: 17 LPTEKLQRCEKIGEGVFGEVFQTIADHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIII 76
Query: 156 FSHPNVLPVIGCVNSPPDLVVISQYMAWGSLYALL 190
++L C + + + S + GS LL
Sbjct: 77 SKELSLLSGEVCNRTEGFIGLNSVHCVQGSYPPLL 111
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint,
transferase-transferase inhib complex; HET: S25; 1.60A
{Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A*
2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Length = 323
Score = 26.1 bits (58), Expect = 9.8
Identities = 17/104 (16%), Positives = 35/104 (33%), Gaps = 26/104 (25%)
Query: 129 VA-KIL---AVRNCTPRVSRDFNEEFPKLRIFSHPNVLPVIGCVNSPPDLVVISQYMAWG 184
VA KI+ +C + + E ++ +H NV+ G + +Y + G
Sbjct: 35 VAVKIVDMKRAVDCPENIKK----EICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGG 90
Query: 185 SLYALLHEGAGIVVDFAQALRFAVDVAR--------GMAFLHSL 220
L+ + + A+ G+ +LH +
Sbjct: 91 ELFDRI----------EPDIGMPEPDAQRFFHQLMAGVVYLHGI 124
>1zhx_A KES1 protein; oxysterol,sterol binding protein, lipid binding
protein; HET: HC3; 1.50A {Saccharomyces cerevisiae}
SCOP: d.338.1.1 PDB: 1zht_A* 1zhw_A* 1zhy_A* 1zhz_A*
3spw_A* 1zi7_A
Length = 438
Score = 26.4 bits (58), Expect = 10.0
Identities = 11/57 (19%), Positives = 18/57 (31%), Gaps = 9/57 (15%)
Query: 67 NNQDLTKINFKDQSWLGLKTRSRDATLSRHKGISLNDLSLHTKISSGPNGDTWRGRW 123
+ L I F + + K S A + + S + IS G+W
Sbjct: 228 STGLLCVIEFSGRGYFSGKKNSFKARIYKDSKDSKDKEKALYTIS---------GQW 275
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.323 0.138 0.427
Gapped
Lambda K H
0.267 0.0672 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 3,803,869
Number of extensions: 226012
Number of successful extensions: 1423
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1083
Number of HSP's successfully gapped: 457
Length of query: 239
Length of database: 6,701,793
Length adjustment: 91
Effective length of query: 148
Effective length of database: 4,160,982
Effective search space: 615825336
Effective search space used: 615825336
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 56 (25.5 bits)