Psyllid ID: psy12581

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150---
Protein Sequence
MKKKKIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQRGRCYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKMKR
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccEEcccccEEEEEccccccccccccccccccccHHHHcccccccccccHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHccccccccccccHHHHHHHHHHHcccccccccHHHHHHHHHHHHc
Secondary Structure Prediction (SSPRO)
cHHHHHHHHHHHHHcccEHHHHHHHccEEccccccEEccccHHHHHHcccccccEEEccHHHHHHHHHcccccHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHccccccccccccHHHHHHHHHHHHccccccccHHHHHHHHHHHHc
Coil and Loop (DISEMBL)
MKKKKIVYSFYLNskksktsnAFLFCCQIDEDLTARINMADAQFsfqqrgrcyypawmspealqkkpgdrnleacdMWSFAVLLWELAtrevpfadltpmEVGMKVALEGlritippgisSHLSKLIRICMnedpgkrptfdmVLPILDKMKR
Flexible Loop (DISEMBL)
MKKKKIVYSFYLnskksktsnAFLFCCQIDEDLTARINMADAQFSFQQRGRCYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMnedpgkrptfdmvlpildkmkr
Low Complexity Region (SEG)
MKKKKIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQRGRCYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKMKR
Disordered region (IsUnstruct)
*****IVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQRGRCYYPAWMSPEAL*****DRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNE******TFDMVLP*******
Disordered Region (DISOPRED)
***KKIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQRGRCYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKMK*
Disordered Region (DISEMBL)
MKKKKIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQRGRCYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKMKR
Disordered Region (DISPRO)
*****IVY*FYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQRGRCYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKMKR
Transmembrane Helix (TMHMM)
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Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MKKKKIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQRGRCYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKMKR
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	153	2.2.26 [Sep-21-2011]
Q5R5V4	452	Integrin-linked protein k	yes	N/A	0.810	0.274	0.733	1e-50
Q99J82	452	Integrin-linked protein k	yes	N/A	0.810	0.274	0.741	1e-50
O55222	452	Integrin-linked protein k	yes	N/A	0.810	0.274	0.741	1e-50
Q13418	452	Integrin-linked protein k	yes	N/A	0.810	0.274	0.741	2e-50
Q3SWY2	452	Integrin-linked protein k	yes	N/A	0.810	0.274	0.741	2e-50
P57044	451	Integrin-linked protein k	yes	N/A	0.803	0.272	0.733	1e-48
Q54H45	690	Probable serine/threonine	yes	N/A	0.777	0.172	0.341	1e-15
Q9FPR3	933	Serine/threonine-protein	no	N/A	0.627	0.102	0.363	2e-15
Q55GU0	916	Probable serine/threonine	no	N/A	0.614	0.102	0.381	3e-15
Q9ESL4	802	Mitogen-activated protein	no	N/A	0.601	0.114	0.389	2e-14

>sp|Q5R5V4|ILK_PONAB Integrin-linked protein kinase OS=Pongo abelii GN=ILK PE=2 SV=1

 Score =  198 bits (504), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 91/124 (73%), Positives = 108/124 (87%)

Query: 29  IDEDLTARINMADAQFSFQQRGRCYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWELA 88
           IDED+TARI+MAD +FSFQ  GR Y PAW++PEALQKKP D N+ + DMWSFAVLLWEL 
Sbjct: 327 IDEDMTARISMADVKFSFQCPGRMYAPAWVAPEALQKKPEDTNIRSADMWSFAVLLWELV 386

Query: 89  TREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPIL 148
           TREVPFADL+ ME+GM+VALEGLR TIPPGIS H+ KL++ICMNEDP KRP FDM++PIL
Sbjct: 387 TREVPFADLSNMEIGMRVALEGLRPTIPPGISPHVCKLMKICMNEDPAKRPKFDMIVPIL 446

Query: 149 DKMK 152
           +KM+
Sbjct: 447 EKMQ 450

Receptor-proximal protein kinase regulating integrin-mediated signal transduction. May act as a mediator of inside-out integrin signaling. Focal adhesion protein part of the complex ILK-PINCH. This complex is considered to be one of the convergence points of integrin- and growth factor-signaling pathway. Could be implicated in mediating cell architecture, adhesion to integrin substrates and anchorage-dependent growth in epithelial cells. Phosphorylates beta-1 and beta-3 integrin subunit on serine and threonine residues, but also AKT1 and GSK3B.
Pongo abelii (taxid: 9601)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1

>sp|Q99J82|ILK_RAT Integrin-linked protein kinase OS=Rattus norvegicus GN=Ilk PE=2 SV=1

 Score =  197 bits (502), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 92/124 (74%), Positives = 107/124 (86%)

Query: 29  IDEDLTARINMADAQFSFQQRGRCYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWELA 88
           IDED+TARI+MAD +FSFQ  GR Y PAW++PEALQKKP D N  + DMWSFAVLLWEL 
Sbjct: 327 IDEDMTARISMADVKFSFQCPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELV 386

Query: 89  TREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPIL 148
           TREVPFADL+ ME+GMKVALEGLR TIPPGIS H+ KL++ICMNEDP KRP FDM++PIL
Sbjct: 387 TREVPFADLSNMEIGMKVALEGLRPTIPPGISPHVCKLMKICMNEDPAKRPKFDMIVPIL 446

Query: 149 DKMK 152
           +KM+
Sbjct: 447 EKMQ 450

Receptor-proximal protein kinase regulating integrin-mediated signal transduction. May act as a mediator of inside-out integrin signaling. Focal adhesion protein part of the complex ILK-PINCH. This complex is considered to be one of the convergence points of integrin- and growth factor-signaling pathway. Could be implicated in mediating cell architecture, adhesion to integrin substrates and anchorage-dependent growth in epithelial cells. Phosphorylates beta-1 and beta-3 integrin subunit on serine and threonine residues, but also AKT1 and GSK3B.

Rattus norvegicus (taxid: 10116)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|O55222|ILK_MOUSE Integrin-linked protein kinase OS=Mus musculus GN=Ilk PE=1 SV=2

 Score =  197 bits (502), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 92/124 (74%), Positives = 107/124 (86%)

Query: 29  IDEDLTARINMADAQFSFQQRGRCYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWELA 88
           IDED+TARI+MAD +FSFQ  GR Y PAW++PEALQKKP D N  + DMWSFAVLLWEL 
Sbjct: 327 IDEDMTARISMADVKFSFQCPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELV 386

Query: 89  TREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPIL 148
           TREVPFADL+ ME+GMKVALEGLR TIPPGIS H+ KL++ICMNEDP KRP FDM++PIL
Sbjct: 387 TREVPFADLSNMEIGMKVALEGLRPTIPPGISPHVCKLMKICMNEDPAKRPKFDMIVPIL 446

Query: 149 DKMK 152
           +KM+
Sbjct: 447 EKMQ 450

Receptor-proximal protein kinase regulating integrin-mediated signal transduction. May act as a mediator of inside-out integrin signaling. Focal adhesion protein part of the complex ILK-PINCH. This complex is considered to be one of the convergence points of integrin- and growth factor-signaling pathway. Could be implicated in mediating cell architecture, adhesion to integrin substrates and anchorage-dependent growth in epithelial cells. Phosphorylates beta-1 and beta-3 integrin subunit on serine and threonine residues, but also AKT1 and GSK3B.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q13418|ILK_HUMAN Integrin-linked protein kinase OS=Homo sapiens GN=ILK PE=1 SV=2

 Score =  197 bits (502), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 92/124 (74%), Positives = 107/124 (86%)

Query: 29  IDEDLTARINMADAQFSFQQRGRCYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWELA 88
           IDED+TARI+MAD +FSFQ  GR Y PAW++PEALQKKP D N  + DMWSFAVLLWEL 
Sbjct: 327 IDEDMTARISMADVKFSFQCPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELV 386

Query: 89  TREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPIL 148
           TREVPFADL+ ME+GMKVALEGLR TIPPGIS H+ KL++ICMNEDP KRP FDM++PIL
Sbjct: 387 TREVPFADLSNMEIGMKVALEGLRPTIPPGISPHVCKLMKICMNEDPAKRPKFDMIVPIL 446

Query: 149 DKMK 152
           +KM+
Sbjct: 447 EKMQ 450

Receptor-proximal protein kinase regulating integrin-mediated signal transduction. May act as a mediator of inside-out integrin signaling. Focal adhesion protein part of the complex ILK-PINCH. This complex is considered to be one of the convergence points of integrin- and growth factor-signaling pathway. Could be implicated in mediating cell architecture, adhesion to integrin substrates and anchorage-dependent growth in epithelial cells. Phosphorylates beta-1 and beta-3 integrin subunit on serine and threonine residues, but also AKT1 and GSK3B.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q3SWY2|ILK_BOVIN Integrin-linked protein kinase OS=Bos taurus GN=ILK PE=2 SV=1

 Score =  197 bits (502), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 92/124 (74%), Positives = 107/124 (86%)

Query: 29  IDEDLTARINMADAQFSFQQRGRCYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWELA 88
           IDED+TARI+MAD +FSFQ  GR Y PAW++PEALQKKP D N  + DMWSFAVLLWEL 
Sbjct: 327 IDEDMTARISMADVKFSFQCPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELV 386

Query: 89  TREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPIL 148
           TREVPFADL+ ME+GMKVALEGLR TIPPGIS H+ KL++ICMNEDP KRP FDM++PIL
Sbjct: 387 TREVPFADLSNMEIGMKVALEGLRPTIPPGISPHVCKLMKICMNEDPAKRPKFDMIVPIL 446

Query: 149 DKMK 152
           +KM+
Sbjct: 447 EKMQ 450

Receptor-proximal protein kinase regulating integrin-mediated signal transduction. May act as a mediator of inside-out integrin signaling. Focal adhesion protein part of the complex ILK-PINCH. This complex is considered to be one of the convergence points of integrin- and growth factor-signaling pathway. Could be implicated in mediating cell architecture, adhesion to integrin substrates and anchorage-dependent growth in epithelial cells. Phosphorylates beta-1 and beta-3 integrin subunit on serine and threonine residues, but also AKT1 and GSK3B.

Bos taurus (taxid: 9913)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|P57044|ILK_CAVPO Integrin-linked protein kinase OS=Cavia porcellus GN=ILK PE=2 SV=1

 Score =  191 bits (486), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 91/124 (73%), Positives = 106/124 (85%), Gaps = 1/124 (0%)

Query: 29  IDEDLTARINMADAQFSFQQRGRCYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWELA 88
           IDED+TARI+MAD +FSFQ  GR Y PAW++PEALQKKP D N  + DMWSFAVLLWEL 
Sbjct: 327 IDEDMTARISMADVKFSFQCPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELV 386

Query: 89  TREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPIL 148
           TREVPFADL+ ME+GMKVALEG R TIPPGIS H+ KL++ICMNEDP KRP FDM++PIL
Sbjct: 387 TREVPFADLSNMEIGMKVALEG-RPTIPPGISPHVCKLMKICMNEDPAKRPKFDMIVPIL 445

Query: 149 DKMK 152
           +KM+
Sbjct: 446 EKMQ 449

Receptor-proximal protein kinase regulating integrin-mediated signal transduction. May act as a mediator of inside-out integrin signaling. Focal adhesion protein part of the complex ILK-PINCH. This complex is considered to be one of the convergence points of integrin- and growth factor-signaling pathway. Could be implicated in mediating cell architecture, adhesion to integrin substrates and anchorage-dependent growth in epithelial cells. Phosphorylates beta-1 and beta-3 integrin subunit on serine and threonine residues, but also AKT1 and GSK3B.

Cavia porcellus (taxid: 10141)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q54H45|DRKB_DICDI Probable serine/threonine-protein kinase drkB OS=Dictyostelium discoideum GN=drkB PE=3 SV=1

 Score = 82.0 bits (201), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 44/129 (34%), Positives = 72/129 (55%), Gaps = 10/129 (7%)

Query: 29  IDEDLTARINMADAQFS-FQQRGR----CYYPAWMSPEALQKKPGDRNLEACDMWSFAVL 83
           +DE+   ++ +AD   S  +Q+G     C  P W SPE L+ +   R  E  D++SF ++
Sbjct: 522 VDENW--KVKVADFGLSTIEQQGATMTACGTPCWTSPEVLRSQ---RYTEKADVYSFGII 576

Query: 84  LWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDM 143
           LWE ATR+ P+  + P +V   V  EG+R   P        +L++ C+NE+P +RPT + 
Sbjct: 577 LWECATRQDPYFGIPPFQVIFAVGREGMRPPTPKYGPPKYIQLLKDCLNENPSQRPTMEQ 636

Query: 144 VLPILDKMK 152
            L IL+ ++
Sbjct: 637 CLEILESIE 645

Dictyostelium discoideum (taxid: 44689)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9FPR3|EDR1_ARATH Serine/threonine-protein kinase EDR1 OS=Arabidopsis thaliana GN=EDR1 PE=1 SV=1

 Score = 81.3 bits (199), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 36/99 (36%), Positives = 57/99 (57%), Gaps = 3/99 (3%)

Query: 55  PAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRIT 114
           P WM+PE L+ +P +   E CD++SF V+LWELAT  +P+  + PM+V   V  +  R+ 
Sbjct: 831 PEWMAPEVLRNEPSN---EKCDVYSFGVILWELATLRLPWRGMNPMQVVGAVGFQNRRLE 887

Query: 115 IPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKMKR 153
           IP  +   + ++I  C   DP  RP+F  +  +L  + R
Sbjct: 888 IPKELDPVVGRIILECWQTDPNLRPSFAQLTEVLKPLNR 926

MAPKKK serine/threonine-protein kinase involved in the regulation of a MAP kinase cascade (probably including MPK3 and MPK6) that negatively regulates salicylic acid- (SA-) dependent defense responses, abscisic acid (ABA) signaling, and ethylene-induced senescence. Modulates also stress response (e.g. drought) signaling and cell death, in an ORE9-dependent manner. Functions at a point of cross talk between ethylene, ABA and SA signaling that impinges on senescence and cell death. In another hand, confers sensitivity to various pathogens such as the fungus Erysiphe cichoracearum, the oomycete Hyaloperonospora parasitica and the bacteria Pseudomonas syringae pv. tomato DC3000. Required for the resistance to some hemibiotrophic/necrotrophic fungal pathogens (e.g. Colletotrichum gloeosporioides, Colletotrichum higginsianum and Alternaria brassicicola) through the induction of defensins expression, probably by repressing MYC2, an inhibitor of defensin genes (PDFs). Together with KEG, may regulate endocytic trafficking and/or the formation of signaling complexes on trans-Golgi network (TGN)/ early endosome (EE) vesicles during stress responses.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q55GU0|Y9955_DICDI Probable serine/threonine-protein kinase DDB_G0267514 OS=Dictyostelium discoideum GN=DDB_G0267514 PE=3 SV=1

 Score = 80.9 bits (198), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 37/97 (38%), Positives = 60/97 (61%), Gaps = 3/97 (3%)

Query: 55  PAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRIT 114
           P WMSPE L    G+   E  D+++F ++LWEL T E+P++ L  +++ + V  + LR  
Sbjct: 822 PIWMSPELLM---GEDYTEKVDVYAFGIILWELGTGELPYSGLDSVQLALAVTTKSLRPP 878

Query: 115 IPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKM 151
           IP      LS LI+ C ++DP KRP+F  +L +L+++
Sbjct: 879 IPNAWPYQLSHLIQACWHQDPLKRPSFTEILNLLNEI 915

Dictyostelium discoideum (taxid: 44689)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9ESL4|MLTK_MOUSE Mitogen-activated protein kinase kinase kinase MLT OS=Mus musculus GN=Mltk PE=1 SV=1

 Score = 78.2 bits (191), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 37/95 (38%), Positives = 54/95 (56%), Gaps = 3/95 (3%)

Query: 57  WMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIP 116
           WM+PE +Q  P     E CD +S+ V+LWE+ TREVPF  L  ++V   V  +  R+TIP
Sbjct: 172 WMAPEVIQSLPVS---ETCDTYSYGVVLWEMLTREVPFKGLEGLQVAWLVVEKNERLTIP 228

Query: 117 PGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKM 151
                  ++L+  C   D  KRP+F  ++ IL+ M
Sbjct: 229 SSCPRSFAELLHQCWEADAKKRPSFKQIISILESM 263

Stress-activated component of a protein kinase signal transduction cascade. Regulates the JNK and p38 pathways. Pro-apoptotic. Role in regulation of S and G2 cell cycle checkpoint by direct phosphorylation of CHEK2. Isoform 1, but not isoform 2, phosphorylates histone H3 at 'Ser-28'.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 5

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	153
242023921	448	Integrin-linked protein kinase, putative	0.816	0.279	0.864	2e-60
58388868	448	AGAP006573-PA [Anopheles gambiae str. PE	0.915	0.312	0.7	3e-58
307204629	449	Integrin-linked protein kinase [Harpegna	0.875	0.298	0.756	4e-58
307189399	449	Integrin-linked protein kinase [Camponot	0.875	0.298	0.756	5e-58
156537021	449	PREDICTED: integrin-linked protein kinas	0.875	0.298	0.756	5e-58
193639989	448	PREDICTED: integrin-linked protein kinas	0.915	0.312	0.72	8e-58
340716857	449	PREDICTED: integrin-linked protein kinas	0.875	0.298	0.75	9e-58
383858626	449	PREDICTED: integrin-linked protein kinas	0.875	0.298	0.75	9e-58
66512717	449	PREDICTED: integrin-linked protein kinas	0.875	0.298	0.75	1e-57
383858630	449	PREDICTED: integrin-linked protein kinas	0.875	0.298	0.743	1e-57

>gi|242023921|ref|XP_002432379.1| Integrin-linked protein kinase, putative [Pediculus humanus corporis] gi|212517802|gb|EEB19641.1| Integrin-linked protein kinase, putative [Pediculus humanus corporis]

 Score =  236 bits (602), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 108/125 (86%), Positives = 117/125 (93%)

Query: 29  IDEDLTARINMADAQFSFQQRGRCYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWELA 88
           IDEDLTARINMAD +F+FQ+R R YYPAWMSPEALQKKP DRN EACDMWSFA+LLWEL+
Sbjct: 324 IDEDLTARINMADFKFTFQERARVYYPAWMSPEALQKKPSDRNWEACDMWSFAILLWELS 383

Query: 89  TREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPIL 148
           TREVPFADL+PME GMK+A+EGLRITIPPGIS HL+KLIRICMNEDPGKRPTFD VLPIL
Sbjct: 384 TREVPFADLSPMEQGMKIAVEGLRITIPPGISPHLAKLIRICMNEDPGKRPTFDQVLPIL 443

Query: 149 DKMKR 153
           DKMKR
Sbjct: 444 DKMKR 448

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|58388868|ref|XP_316598.2| AGAP006573-PA [Anopheles gambiae str. PEST] gi|55239330|gb|EAA11332.2| AGAP006573-PA [Anopheles gambiae str. PEST]

 Score =  229 bits (584), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 105/150 (70%), Positives = 124/150 (82%), Gaps = 10/150 (6%)

Query: 4   KKIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQRGRCYYPAWMSPEAL 63
           ++I+  ++LNS          F   ID+DLTARINMADA+FSFQ+RGR Y PAWMSPE L
Sbjct: 309 ERIIPEYHLNS----------FHVMIDDDLTARINMADAKFSFQERGRVYQPAWMSPEML 358

Query: 64  QKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHL 123
           QKK  +RN EACDMWSFA+ +WELATRE+PFADLTPME GM++A EGLR+TIPPG S HL
Sbjct: 359 QKKRTERNWEACDMWSFAICIWELATREIPFADLTPMEAGMRIATEGLRVTIPPGTSPHL 418

Query: 124 SKLIRICMNEDPGKRPTFDMVLPILDKMKR 153
           +KLI+ICMNEDPGKRPTFDM++PILDKMKR
Sbjct: 419 AKLIKICMNEDPGKRPTFDMIIPILDKMKR 448

Source: Anopheles gambiae str. PEST

Species: Anopheles gambiae

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307204629|gb|EFN83251.1| Integrin-linked protein kinase [Harpegnathos saltator]

 Score =  229 bits (583), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 109/144 (75%), Positives = 120/144 (83%), Gaps = 10/144 (6%)

Query: 10  FYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQRGRCYYPAWMSPEALQKKPGD 69
           F+LNSK             IDEDLTAR+NMADA+FSFQ+ GR Y PAWMSPEAL K+P D
Sbjct: 316 FHLNSKH----------IMIDEDLTARVNMADAKFSFQEVGRIYEPAWMSPEALSKRPAD 365

Query: 70  RNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRI 129
            NLEA DMWSFAVLLWELATREVPFADL+PME GMK+ALE LR+ IPPGIS HL+KLIRI
Sbjct: 366 INLEASDMWSFAVLLWELATREVPFADLSPMECGMKIALEDLRVNIPPGISPHLAKLIRI 425

Query: 130 CMNEDPGKRPTFDMVLPILDKMKR 153
           CMNEDPGKRP+FDMV+PILDKMKR
Sbjct: 426 CMNEDPGKRPSFDMVVPILDKMKR 449

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307189399|gb|EFN73809.1| Integrin-linked protein kinase [Camponotus floridanus]

 Score =  228 bits (582), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 109/144 (75%), Positives = 121/144 (84%), Gaps = 10/144 (6%)

Query: 10  FYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQRGRCYYPAWMSPEALQKKPGD 69
           F+LNSK             IDEDLTAR+NMADA+FSFQ+ GR Y PAWMSPEAL K+P D
Sbjct: 316 FHLNSKH----------IMIDEDLTARVNMADAKFSFQEVGRIYEPAWMSPEALSKRPAD 365

Query: 70  RNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRI 129
            NLEA DMWSFAVLLWELATREVPFADL+PME GMK+ALE LR++IPPGIS HL+KLIRI
Sbjct: 366 INLEASDMWSFAVLLWELATREVPFADLSPMECGMKIALEDLRVSIPPGISPHLAKLIRI 425

Query: 130 CMNEDPGKRPTFDMVLPILDKMKR 153
           CMNEDPGKRP+FDMV+PILDKMKR
Sbjct: 426 CMNEDPGKRPSFDMVIPILDKMKR 449

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|156537021|ref|XP_001608305.1| PREDICTED: integrin-linked protein kinase-like [Nasonia vitripennis]

 Score =  228 bits (582), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 109/144 (75%), Positives = 121/144 (84%), Gaps = 10/144 (6%)

Query: 10  FYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQRGRCYYPAWMSPEALQKKPGD 69
           F+LNSK             IDEDLTAR+NMAD++FSFQ+ GR Y PAWMSPEAL KKP D
Sbjct: 316 FHLNSKH----------VMIDEDLTARVNMADSKFSFQEVGRIYEPAWMSPEALSKKPSD 365

Query: 70  RNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRI 129
            NLEA DMWSFAVLLWELATREVPFADL+PME GMK+ALE LR++IPPGIS HL+KLIRI
Sbjct: 366 INLEASDMWSFAVLLWELATREVPFADLSPMECGMKIALEDLRVSIPPGISPHLAKLIRI 425

Query: 130 CMNEDPGKRPTFDMVLPILDKMKR 153
           CMNEDPGKRP+FDMV+PILDKMKR
Sbjct: 426 CMNEDPGKRPSFDMVVPILDKMKR 449

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|193639989|ref|XP_001947936.1| PREDICTED: integrin-linked protein kinase-like [Acyrthosiphon pisum]

 Score =  228 bits (580), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 108/150 (72%), Positives = 123/150 (82%), Gaps = 10/150 (6%)

Query: 4   KKIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQRGRCYYPAWMSPEAL 63
           ++I+  F+LNS              IDEDLTARINMADA+FSFQ++ R YYP WMSPEAL
Sbjct: 309 ERIIPQFHLNSHH----------IMIDEDLTARINMADAKFSFQEKARIYYPGWMSPEAL 358

Query: 64  QKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHL 123
           QKK  D N EACDMWSFA+LLWELATREVPF+ L+PME+GMKVALEGLR++IP  IS HL
Sbjct: 359 QKKRIDTNSEACDMWSFAILLWELATREVPFSHLSPMEIGMKVALEGLRVSIPSDISPHL 418

Query: 124 SKLIRICMNEDPGKRPTFDMVLPILDKMKR 153
           +KLI+ICMNEDPGKRPTFDMVLPILDKMKR
Sbjct: 419 TKLIKICMNEDPGKRPTFDMVLPILDKMKR 448

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|340716857|ref|XP_003396909.1| PREDICTED: integrin-linked protein kinase-like [Bombus terrestris] gi|350402928|ref|XP_003486647.1| PREDICTED: integrin-linked protein kinase-like [Bombus impatiens]

 Score =  228 bits (580), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 108/144 (75%), Positives = 121/144 (84%), Gaps = 10/144 (6%)

Query: 10  FYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQRGRCYYPAWMSPEALQKKPGD 69
           F+LNSK             IDEDLTAR+NMAD++FSFQ+ GR Y PAWMSPEAL K+P D
Sbjct: 316 FHLNSKH----------IMIDEDLTARVNMADSKFSFQEVGRIYEPAWMSPEALSKRPAD 365

Query: 70  RNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRI 129
            NLEA DMWSFAVLLWELATREVPFADL+PME GMK+ALE LR++IPPGIS HL+KLIRI
Sbjct: 366 INLEASDMWSFAVLLWELATREVPFADLSPMECGMKIALEDLRVSIPPGISPHLAKLIRI 425

Query: 130 CMNEDPGKRPTFDMVLPILDKMKR 153
           CMNEDPGKRP+FDMV+PILDKMKR
Sbjct: 426 CMNEDPGKRPSFDMVVPILDKMKR 449

Source: Bombus terrestris

Species: Bombus terrestris

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383858626|ref|XP_003704800.1| PREDICTED: integrin-linked protein kinase-like [Megachile rotundata]

 Score =  228 bits (580), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 108/144 (75%), Positives = 121/144 (84%), Gaps = 10/144 (6%)

Query: 10  FYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQRGRCYYPAWMSPEALQKKPGD 69
           F+LNSK             IDEDLTAR+NMAD++FSFQ+ GR Y PAWMSPEAL K+P D
Sbjct: 316 FHLNSKH----------IMIDEDLTARVNMADSKFSFQEVGRIYEPAWMSPEALSKRPAD 365

Query: 70  RNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRI 129
            NLEA DMWSFAVLLWELATREVPFADL+PME GMK+ALE LR++IPPGIS HL+KLIRI
Sbjct: 366 INLEASDMWSFAVLLWELATREVPFADLSPMECGMKIALEDLRVSIPPGISPHLAKLIRI 425

Query: 130 CMNEDPGKRPTFDMVLPILDKMKR 153
           CMNEDPGKRP+FDMV+PILDKMKR
Sbjct: 426 CMNEDPGKRPSFDMVVPILDKMKR 449

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|66512717|ref|XP_396799.2| PREDICTED: integrin-linked protein kinase-like [Apis mellifera] gi|380017976|ref|XP_003692917.1| PREDICTED: integrin-linked protein kinase-like [Apis florea]

 Score =  227 bits (579), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 108/144 (75%), Positives = 121/144 (84%), Gaps = 10/144 (6%)

Query: 10  FYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQRGRCYYPAWMSPEALQKKPGD 69
           F+LNSK             IDEDLTAR+NMAD++FSFQ+ GR Y PAWMSPEAL K+P D
Sbjct: 316 FHLNSKH----------IMIDEDLTARVNMADSKFSFQEVGRIYEPAWMSPEALSKRPAD 365

Query: 70  RNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRI 129
            NLEA DMWSFAVLLWELATREVPFADL+PME GMK+ALE LR++IPPGIS HL+KLIRI
Sbjct: 366 INLEASDMWSFAVLLWELATREVPFADLSPMECGMKIALEDLRVSIPPGISPHLAKLIRI 425

Query: 130 CMNEDPGKRPTFDMVLPILDKMKR 153
           CMNEDPGKRP+FDMV+PILDKMKR
Sbjct: 426 CMNEDPGKRPSFDMVVPILDKMKR 449

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383858630|ref|XP_003704802.1| PREDICTED: integrin-linked protein kinase-like [Megachile rotundata]

 Score =  227 bits (578), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 107/144 (74%), Positives = 121/144 (84%), Gaps = 10/144 (6%)

Query: 10  FYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQRGRCYYPAWMSPEALQKKPGD 69
           F+LNSK             IDEDLTAR+NMAD++FSFQ+ GR Y PAWMSPEAL K+P D
Sbjct: 316 FHLNSKH----------IMIDEDLTARVNMADSKFSFQEVGRIYEPAWMSPEALSKRPAD 365

Query: 70  RNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRI 129
            NLE CDMWSFAVLLWELATREVPFADL+PME GMK+ALE LR++IPPGIS HL+KLI+I
Sbjct: 366 INLELCDMWSFAVLLWELATREVPFADLSPMECGMKIALEDLRVSIPPGISPHLAKLIKI 425

Query: 130 CMNEDPGKRPTFDMVLPILDKMKR 153
           CMNEDPGKRP+FDMV+PILDKMKR
Sbjct: 426 CMNEDPGKRPSFDMVVPILDKMKR 449

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	153
FB|FBgn0028427	448	Ilk "Integrin linked kinase" [	0.816	0.279	0.728	2e-49
UNIPROTKB|G5E505	452	ILK "Integrin-linked protein k	0.810	0.274	0.741	1.6e-47
UNIPROTKB|Q3SWY2	452	ILK "Integrin-linked protein k	0.810	0.274	0.741	1.6e-47
UNIPROTKB|E2R5H4	452	ILK "Uncharacterized protein"	0.810	0.274	0.741	1.6e-47
UNIPROTKB|B7Z1I0	318	ILK "Integrin-linked protein k	0.810	0.389	0.741	1.6e-47
UNIPROTKB|B7Z418	391	ILK "cDNA FLJ50979, moderately	0.810	0.317	0.741	1.6e-47
UNIPROTKB|Q13418	452	ILK "Integrin-linked protein k	0.810	0.274	0.741	1.6e-47
UNIPROTKB|I3L9C8	452	ILK "Uncharacterized protein"	0.810	0.274	0.741	1.6e-47
MGI|MGI:1195267	452	Ilk "integrin linked kinase" [	0.810	0.274	0.741	1.6e-47
RGD|620063	452	Ilk "integrin-linked kinase" [	0.810	0.274	0.741	1.6e-47

FB|FBgn0028427 Ilk "Integrin linked kinase" [Drosophila melanogaster (taxid:7227)]

 Score = 515 (186.3 bits), Expect = 2.0e-49, P = 2.0e-49
 Identities = 91/125 (72%), Positives = 109/125 (87%)

Query:    29 IDEDLTARINMADAQFSFQQRGRCYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWELA 88
             ID+DLTARINM DA+FSFQ++GR Y PAWMSPE LQ+K  DRN EACDMWSFA+L+WEL 
Sbjct:   324 IDDDLTARINMGDAKFSFQEKGRIYQPAWMSPETLQRKQADRNWEACDMWSFAILIWELT 383

Query:    89 TREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPIL 148
             TREVPFA+ +PME G ++ALEGLR+ IPPG S+H++KLI ICMNEDPGKRP  DMV+PIL
Sbjct:   384 TREVPFAEWSPMECGNEIALEGLRVKIPPGTSTHMAKLISICMNEDPGKRPKLDMVVPIL 443

Query:   149 DKMKR 153
             +KM+R
Sbjct:   444 EKMRR 448

GO:0007229 "integrin-mediated signaling pathway" evidence=ISS;IMP

GO:0004674 "protein serine/threonine kinase activity" evidence=ISS

GO:0005925 "focal adhesion" evidence=ISS

GO:0007016 "cytoskeletal anchoring at plasma membrane" evidence=ISS

GO:0006468 "protein phosphorylation" evidence=IKR;NAS

GO:0004672 "protein kinase activity" evidence=IKR;NAS

GO:0016203 "muscle attachment" evidence=IMP

GO:0007475 "apposition of dorsal and ventral imaginal disc-derived wing surfaces" evidence=IMP

GO:0007160 "cell-matrix adhesion" evidence=IMP

GO:0007155 "cell adhesion" evidence=TAS

GO:0005524 "ATP binding" evidence=IEA

GO:0009966 "regulation of signal transduction" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

UNIPROTKB|G5E505 ILK "Integrin-linked protein kinase" [Bos taurus (taxid:9913)]

 Score = 497 (180.0 bits), Expect = 1.6e-47, P = 1.6e-47
 Identities = 92/124 (74%), Positives = 107/124 (86%)

Query:    29 IDEDLTARINMADAQFSFQQRGRCYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWELA 88
             IDED+TARI+MAD +FSFQ  GR Y PAW++PEALQKKP D N  + DMWSFAVLLWEL 
Sbjct:   327 IDEDMTARISMADVKFSFQCPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELV 386

Query:    89 TREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPIL 148
             TREVPFADL+ ME+GMKVALEGLR TIPPGIS H+ KL++ICMNEDP KRP FDM++PIL
Sbjct:   387 TREVPFADLSNMEIGMKVALEGLRPTIPPGISPHVCKLMKICMNEDPAKRPKFDMIVPIL 446

Query:   149 DKMK 152
             +KM+
Sbjct:   447 EKMQ 450

GO:0090263 "positive regulation of canonical Wnt receptor signaling pathway" evidence=IEA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IEA

GO:0045669 "positive regulation of osteoblast differentiation" evidence=IEA

GO:0045197 "establishment or maintenance of epithelial cell apical/basal polarity" evidence=IEA

GO:0042327 "positive regulation of phosphorylation" evidence=IEA

GO:0030513 "positive regulation of BMP signaling pathway" evidence=IEA

GO:0030027 "lamellipodium" evidence=IEA

GO:0019901 "protein kinase binding" evidence=IEA

GO:0008284 "positive regulation of cell proliferation" evidence=IEA

GO:0001658 "branching involved in ureteric bud morphogenesis" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

UNIPROTKB|Q3SWY2 ILK "Integrin-linked protein kinase" [Bos taurus (taxid:9913)]

 Score = 497 (180.0 bits), Expect = 1.6e-47, P = 1.6e-47
 Identities = 92/124 (74%), Positives = 107/124 (86%)

Query:    29 IDEDLTARINMADAQFSFQQRGRCYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWELA 88
             IDED+TARI+MAD +FSFQ  GR Y PAW++PEALQKKP D N  + DMWSFAVLLWEL 
Sbjct:   327 IDEDMTARISMADVKFSFQCPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELV 386

Query:    89 TREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPIL 148
             TREVPFADL+ ME+GMKVALEGLR TIPPGIS H+ KL++ICMNEDP KRP FDM++PIL
Sbjct:   387 TREVPFADLSNMEIGMKVALEGLRPTIPPGISPHVCKLMKICMNEDPAKRPKFDMIVPIL 446

Query:   149 DKMK 152
             +KM+
Sbjct:   447 EKMQ 450

GO:0030027 "lamellipodium" evidence=IEA

GO:0030017 "sarcomere" evidence=IEA

GO:0005925 "focal adhesion" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0009966 "regulation of signal transduction" evidence=IEA

UNIPROTKB|E2R5H4 ILK "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 497 (180.0 bits), Expect = 1.6e-47, P = 1.6e-47
 Identities = 92/124 (74%), Positives = 107/124 (86%)

Query:    29 IDEDLTARINMADAQFSFQQRGRCYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWELA 88
             IDED+TARI+MAD +FSFQ  GR Y PAW++PEALQKKP D N  + DMWSFAVLLWEL 
Sbjct:   327 IDEDMTARISMADVKFSFQCPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELV 386

Query:    89 TREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPIL 148
             TREVPFADL+ ME+GMKVALEGLR TIPPGIS H+ KL++ICMNEDP KRP FDM++PIL
Sbjct:   387 TREVPFADLSNMEIGMKVALEGLRPTIPPGISPHVCKLMKICMNEDPAKRPKFDMIVPIL 446

Query:   149 DKMK 152
             +KM+
Sbjct:   447 EKMQ 450

GO:0090263 "positive regulation of canonical Wnt receptor signaling pathway" evidence=IEA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IEA

GO:0045669 "positive regulation of osteoblast differentiation" evidence=IEA

GO:0045197 "establishment or maintenance of epithelial cell apical/basal polarity" evidence=IEA

GO:0042327 "positive regulation of phosphorylation" evidence=IEA

GO:0030513 "positive regulation of BMP signaling pathway" evidence=IEA

GO:0030027 "lamellipodium" evidence=IEA

GO:0019901 "protein kinase binding" evidence=IEA

GO:0008284 "positive regulation of cell proliferation" evidence=IEA

GO:0001658 "branching involved in ureteric bud morphogenesis" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

UNIPROTKB|B7Z1I0 ILK "Integrin-linked protein kinase" [Homo sapiens (taxid:9606)]

 Score = 497 (180.0 bits), Expect = 1.6e-47, P = 1.6e-47
 Identities = 92/124 (74%), Positives = 107/124 (86%)

Query:    29 IDEDLTARINMADAQFSFQQRGRCYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWELA 88
             IDED+TARI+MAD +FSFQ  GR Y PAW++PEALQKKP D N  + DMWSFAVLLWEL 
Sbjct:   193 IDEDMTARISMADVKFSFQCPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELV 252

Query:    89 TREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPIL 148
             TREVPFADL+ ME+GMKVALEGLR TIPPGIS H+ KL++ICMNEDP KRP FDM++PIL
Sbjct:   253 TREVPFADLSNMEIGMKVALEGLRPTIPPGISPHVCKLMKICMNEDPAKRPKFDMIVPIL 312

Query:   149 DKMK 152
             +KM+
Sbjct:   313 EKMQ 316

GO:0005524 "ATP binding" evidence=IEA

GO:0001658 "branching involved in ureteric bud morphogenesis" evidence=IEA

GO:0001954 "positive regulation of cell-matrix adhesion" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004871 "signal transducer activity" evidence=IEA

GO:0005178 "integrin binding" evidence=IEA

GO:0005911 "cell-cell junction" evidence=IEA

GO:0005925 "focal adhesion" evidence=IEA

GO:0006469 "negative regulation of protein kinase activity" evidence=IEA

GO:0007050 "cell cycle arrest" evidence=IEA

GO:0007229 "integrin-mediated signaling pathway" evidence=IEA

GO:0007569 "cell aging" evidence=IEA

GO:0008284 "positive regulation of cell proliferation" evidence=IEA

GO:0010667 "negative regulation of cardiac muscle cell apoptotic process" evidence=IEA

GO:0014912 "negative regulation of smooth muscle cell migration" evidence=IEA

GO:0017124 "SH3 domain binding" evidence=IEA

GO:0018105 "peptidyl-serine phosphorylation" evidence=IEA

GO:0030027 "lamellipodium" evidence=IEA

GO:0030335 "positive regulation of cell migration" evidence=IEA

GO:0030513 "positive regulation of BMP signaling pathway" evidence=IEA

GO:0032288 "myelin assembly" evidence=IEA

GO:0032956 "regulation of actin cytoskeleton organization" evidence=IEA

GO:0034446 "substrate adhesion-dependent cell spreading" evidence=IEA

GO:0043025 "neuronal cell body" evidence=IEA

GO:0043034 "costamere" evidence=IEA

GO:0043195 "terminal bouton" evidence=IEA

GO:0043198 "dendritic shaft" evidence=IEA

GO:0043206 "extracellular fibril organization" evidence=IEA

GO:0043234 "protein complex" evidence=IEA

GO:0043406 "positive regulation of MAP kinase activity" evidence=IEA

GO:0043524 "negative regulation of neuron apoptotic process" evidence=IEA

GO:0045197 "establishment or maintenance of epithelial cell apical/basal polarity" evidence=IEA

GO:0045663 "positive regulation of myoblast differentiation" evidence=IEA

GO:0045669 "positive regulation of osteoblast differentiation" evidence=IEA

GO:0045773 "positive regulation of axon extension" evidence=IEA

GO:0048662 "negative regulation of smooth muscle cell proliferation" evidence=IEA

GO:0048812 "neuron projection morphogenesis" evidence=IEA

GO:0050775 "positive regulation of dendrite morphogenesis" evidence=IEA

GO:0051291 "protein heterooligomerization" evidence=IEA

GO:0051897 "positive regulation of protein kinase B signaling cascade" evidence=IEA

UNIPROTKB|B7Z418 ILK "cDNA FLJ50979, moderately similar to Integrin-linked protein kinase (EC 2.7.11.1)" [Homo sapiens (taxid:9606)]

 Score = 497 (180.0 bits), Expect = 1.6e-47, P = 1.6e-47
 Identities = 92/124 (74%), Positives = 107/124 (86%)

Query:    29 IDEDLTARINMADAQFSFQQRGRCYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWELA 88
             IDED+TARI+MAD +FSFQ  GR Y PAW++PEALQKKP D N  + DMWSFAVLLWEL 
Sbjct:   266 IDEDMTARISMADVKFSFQCPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELV 325

Query:    89 TREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPIL 148
             TREVPFADL+ ME+GMKVALEGLR TIPPGIS H+ KL++ICMNEDP KRP FDM++PIL
Sbjct:   326 TREVPFADLSNMEIGMKVALEGLRPTIPPGISPHVCKLMKICMNEDPAKRPKFDMIVPIL 385

Query:   149 DKMK 152
             +KM+
Sbjct:   386 EKMQ 389

GO:0004672 "protein kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0007229 "integrin-mediated signaling pathway" evidence=IEA

UNIPROTKB|Q13418 ILK "Integrin-linked protein kinase" [Homo sapiens (taxid:9606)]

 Score = 497 (180.0 bits), Expect = 1.6e-47, P = 1.6e-47
 Identities = 92/124 (74%), Positives = 107/124 (86%)

Query:    29 IDEDLTARINMADAQFSFQQRGRCYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWELA 88
             IDED+TARI+MAD +FSFQ  GR Y PAW++PEALQKKP D N  + DMWSFAVLLWEL 
Sbjct:   327 IDEDMTARISMADVKFSFQCPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELV 386

Query:    89 TREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPIL 148
             TREVPFADL+ ME+GMKVALEGLR TIPPGIS H+ KL++ICMNEDP KRP FDM++PIL
Sbjct:   387 TREVPFADLSNMEIGMKVALEGLRPTIPPGISPHVCKLMKICMNEDPAKRPKFDMIVPIL 446

Query:   149 DKMK 152
             +KM+
Sbjct:   447 EKMQ 450

GO:0001658 "branching involved in ureteric bud morphogenesis" evidence=IEA

GO:0001954 "positive regulation of cell-matrix adhesion" evidence=IEA

GO:0004871 "signal transducer activity" evidence=IEA

GO:0005178 "integrin binding" evidence=IEA

GO:0005911 "cell-cell junction" evidence=IEA

GO:0006469 "negative regulation of protein kinase activity" evidence=IEA

GO:0007050 "cell cycle arrest" evidence=IEA

GO:0007569 "cell aging" evidence=IEA

GO:0008284 "positive regulation of cell proliferation" evidence=IEA

GO:0010667 "negative regulation of cardiac muscle cell apoptotic process" evidence=IEA

GO:0014912 "negative regulation of smooth muscle cell migration" evidence=IEA

GO:0017124 "SH3 domain binding" evidence=IEA

GO:0018105 "peptidyl-serine phosphorylation" evidence=IEA

GO:0030335 "positive regulation of cell migration" evidence=IEA

GO:0030513 "positive regulation of BMP signaling pathway" evidence=IEA

GO:0032288 "myelin assembly" evidence=IEA

GO:0032956 "regulation of actin cytoskeleton organization" evidence=IEA

GO:0043025 "neuronal cell body" evidence=IEA

GO:0043034 "costamere" evidence=IEA

GO:0043195 "terminal bouton" evidence=IEA

GO:0043198 "dendritic shaft" evidence=IEA

GO:0043206 "extracellular fibril organization" evidence=IEA

GO:0043234 "protein complex" evidence=IEA

GO:0043406 "positive regulation of MAP kinase activity" evidence=IEA

GO:0043524 "negative regulation of neuron apoptotic process" evidence=IEA

GO:0045197 "establishment or maintenance of epithelial cell apical/basal polarity" evidence=IEA

GO:0045663 "positive regulation of myoblast differentiation" evidence=IEA

GO:0045669 "positive regulation of osteoblast differentiation" evidence=IEA

GO:0045773 "positive regulation of axon extension" evidence=IEA

GO:0048662 "negative regulation of smooth muscle cell proliferation" evidence=IEA

GO:0048812 "neuron projection morphogenesis" evidence=IEA

GO:0050775 "positive regulation of dendrite morphogenesis" evidence=IEA

GO:0051291 "protein heterooligomerization" evidence=IEA

GO:0051897 "positive regulation of protein kinase B signaling cascade" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0005925 "focal adhesion" evidence=IEA

GO:0030017 "sarcomere" evidence=IEA

GO:0030027 "lamellipodium" evidence=IEA

GO:0005737 "cytoplasm" evidence=NAS

GO:0004674 "protein serine/threonine kinase activity" evidence=IDA

GO:0005524 "ATP binding" evidence=NAS

GO:0006468 "protein phosphorylation" evidence=IDA

GO:0007160 "cell-matrix adhesion" evidence=NAS

GO:0007229 "integrin-mediated signaling pathway" evidence=IDA;NAS

GO:0008283 "cell proliferation" evidence=NAS

GO:0005515 "protein binding" evidence=IPI

GO:0042327 "positive regulation of phosphorylation" evidence=IMP

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IMP

GO:0090263 "positive regulation of canonical Wnt receptor signaling pathway" evidence=IMP

GO:0019901 "protein kinase binding" evidence=IPI

GO:0034446 "substrate adhesion-dependent cell spreading" evidence=IMP

GO:0005829 "cytosol" evidence=TAS

GO:0034329 "cell junction assembly" evidence=TAS

UNIPROTKB|I3L9C8 ILK "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 497 (180.0 bits), Expect = 1.6e-47, P = 1.6e-47
 Identities = 92/124 (74%), Positives = 107/124 (86%)

Query:    29 IDEDLTARINMADAQFSFQQRGRCYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWELA 88
             IDED+TARI+MAD +FSFQ  GR Y PAW++PEALQKKP D N  + DMWSFAVLLWEL 
Sbjct:   327 IDEDMTARISMADVKFSFQCPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELV 386

Query:    89 TREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPIL 148
             TREVPFADL+ ME+GMKVALEGLR TIPPGIS H+ KL++ICMNEDP KRP FDM++PIL
Sbjct:   387 TREVPFADLSNMEIGMKVALEGLRPTIPPGISPHVCKLMKICMNEDPAKRPKFDMIVPIL 446

Query:   149 DKMK 152
             +KM+
Sbjct:   447 EKMQ 450

GO:0090263 "positive regulation of canonical Wnt receptor signaling pathway" evidence=IEA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IEA

GO:0045669 "positive regulation of osteoblast differentiation" evidence=IEA

GO:0045197 "establishment or maintenance of epithelial cell apical/basal polarity" evidence=IEA

GO:0042327 "positive regulation of phosphorylation" evidence=IEA

GO:0030513 "positive regulation of BMP signaling pathway" evidence=IEA

GO:0030027 "lamellipodium" evidence=IEA

GO:0019901 "protein kinase binding" evidence=IEA

GO:0008284 "positive regulation of cell proliferation" evidence=IEA

GO:0001658 "branching involved in ureteric bud morphogenesis" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

MGI|MGI:1195267 Ilk "integrin linked kinase" [Mus musculus (taxid:10090)]

 Score = 497 (180.0 bits), Expect = 1.6e-47, P = 1.6e-47
 Identities = 92/124 (74%), Positives = 107/124 (86%)

Query:    29 IDEDLTARINMADAQFSFQQRGRCYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWELA 88
             IDED+TARI+MAD +FSFQ  GR Y PAW++PEALQKKP D N  + DMWSFAVLLWEL 
Sbjct:   327 IDEDMTARISMADVKFSFQCPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELV 386

Query:    89 TREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPIL 148
             TREVPFADL+ ME+GMKVALEGLR TIPPGIS H+ KL++ICMNEDP KRP FDM++PIL
Sbjct:   387 TREVPFADLSNMEIGMKVALEGLRPTIPPGISPHVCKLMKICMNEDPAKRPKFDMIVPIL 446

Query:   149 DKMK 152
             +KM+
Sbjct:   447 EKMQ 450

GO:0000166 "nucleotide binding" evidence=IEA

GO:0001558 "regulation of cell growth" evidence=ISO

GO:0001658 "branching involved in ureteric bud morphogenesis" evidence=IDA

GO:0001725 "stress fiber" evidence=ISO

GO:0001954 "positive regulation of cell-matrix adhesion" evidence=ISO

GO:0004672 "protein kinase activity" evidence=ISO

GO:0004674 "protein serine/threonine kinase activity" evidence=ISO

GO:0004871 "signal transducer activity" evidence=ISO

GO:0005178 "integrin binding" evidence=ISO

GO:0005515 "protein binding" evidence=IPI

GO:0005524 "ATP binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISO

GO:0005886 "plasma membrane" evidence=IEA

GO:0005911 "cell-cell junction" evidence=ISO

GO:0005925 "focal adhesion" evidence=ISO;ISA;IDA

GO:0006468 "protein phosphorylation" evidence=ISO

GO:0006469 "negative regulation of protein kinase activity" evidence=ISO

GO:0007050 "cell cycle arrest" evidence=ISO

GO:0007229 "integrin-mediated signaling pathway" evidence=ISO

GO:0007569 "cell aging" evidence=ISO

GO:0008284 "positive regulation of cell proliferation" evidence=ISO;IMP

GO:0009966 "regulation of signal transduction" evidence=IEA

GO:0010667 "negative regulation of cardiac muscle cell apoptotic process" evidence=ISO

GO:0014044 "Schwann cell development" evidence=IMP

GO:0014912 "negative regulation of smooth muscle cell migration" evidence=ISO

GO:0016020 "membrane" evidence=IEA

GO:0016301 "kinase activity" evidence=IEA

GO:0016310 "phosphorylation" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0017124 "SH3 domain binding" evidence=ISO

GO:0018105 "peptidyl-serine phosphorylation" evidence=ISO;IMP

GO:0019901 "protein kinase binding" evidence=ISO

GO:0021675 "nerve development" evidence=IMP

GO:0022011 "myelination in peripheral nervous system" evidence=IMP

GO:0030027 "lamellipodium" evidence=IDA

GO:0030030 "cell projection organization" evidence=IMP

GO:0030054 "cell junction" evidence=IEA

GO:0030335 "positive regulation of cell migration" evidence=ISO

GO:0030424 "axon" evidence=ISO

GO:0030513 "positive regulation of BMP signaling pathway" evidence=IMP

GO:0032288 "myelin assembly" evidence=ISO

GO:0032956 "regulation of actin cytoskeleton organization" evidence=ISO

GO:0034446 "substrate adhesion-dependent cell spreading" evidence=ISO

GO:0042327 "positive regulation of phosphorylation" evidence=ISO

GO:0042995 "cell projection" evidence=IEA

GO:0043025 "neuronal cell body" evidence=ISO

GO:0043034 "costamere" evidence=ISO

GO:0043066 "negative regulation of apoptotic process" evidence=ISO

GO:0043195 "terminal bouton" evidence=ISO

GO:0043198 "dendritic shaft" evidence=ISO

GO:0043206 "extracellular fibril organization" evidence=ISO

GO:0043234 "protein complex" evidence=ISO

GO:0043406 "positive regulation of MAP kinase activity" evidence=ISO

GO:0043410 "positive regulation of MAPK cascade" evidence=ISO

GO:0043491 "protein kinase B signaling cascade" evidence=IMP

GO:0043524 "negative regulation of neuron apoptotic process" evidence=ISO

GO:0045197 "establishment or maintenance of epithelial cell apical/basal polarity" evidence=IMP

GO:0045663 "positive regulation of myoblast differentiation" evidence=ISO

GO:0045669 "positive regulation of osteoblast differentiation" evidence=IMP

GO:0045773 "positive regulation of axon extension" evidence=ISO

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=ISO

GO:0048662 "negative regulation of smooth muscle cell proliferation" evidence=ISO

GO:0048812 "neuron projection morphogenesis" evidence=ISO

GO:0050772 "positive regulation of axonogenesis" evidence=ISO

GO:0050775 "positive regulation of dendrite morphogenesis" evidence=ISO

GO:0051291 "protein heterooligomerization" evidence=ISO

GO:0051897 "positive regulation of protein kinase B signaling cascade" evidence=ISO

GO:0090263 "positive regulation of canonical Wnt receptor signaling pathway" evidence=ISO

RGD|620063 Ilk "integrin-linked kinase" [Rattus norvegicus (taxid:10116)]

 Score = 497 (180.0 bits), Expect = 1.6e-47, P = 1.6e-47
 Identities = 92/124 (74%), Positives = 107/124 (86%)

Query:    29 IDEDLTARINMADAQFSFQQRGRCYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWELA 88
             IDED+TARI+MAD +FSFQ  GR Y PAW++PEALQKKP D N  + DMWSFAVLLWEL 
Sbjct:   327 IDEDMTARISMADVKFSFQCPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELV 386

Query:    89 TREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPIL 148
             TREVPFADL+ ME+GMKVALEGLR TIPPGIS H+ KL++ICMNEDP KRP FDM++PIL
Sbjct:   387 TREVPFADLSNMEIGMKVALEGLRPTIPPGISPHVCKLMKICMNEDPAKRPKFDMIVPIL 446

Query:   149 DKMK 152
             +KM+
Sbjct:   447 EKMQ 450

GO:0001558 "regulation of cell growth" evidence=IMP

GO:0001658 "branching involved in ureteric bud morphogenesis" evidence=IEA;ISO

GO:0001954 "positive regulation of cell-matrix adhesion" evidence=IMP

GO:0004672 "protein kinase activity" evidence=IDA

GO:0004674 "protein serine/threonine kinase activity" evidence=ISO;IDA;IMP

GO:0004871 "signal transducer activity" evidence=IDA

GO:0005178 "integrin binding" evidence=IPI

GO:0005515 "protein binding" evidence=IPI

GO:0005524 "ATP binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=IDA

GO:0005886 "plasma membrane" evidence=IEA

GO:0005911 "cell-cell junction" evidence=IDA

GO:0005925 "focal adhesion" evidence=ISO;IDA

GO:0006468 "protein phosphorylation" evidence=ISO;IDA

GO:0006469 "negative regulation of protein kinase activity" evidence=IMP

GO:0007050 "cell cycle arrest" evidence=IMP

GO:0007229 "integrin-mediated signaling pathway" evidence=ISO;IMP

GO:0007569 "cell aging" evidence=IMP

GO:0008284 "positive regulation of cell proliferation" evidence=ISO;IMP

GO:0010667 "negative regulation of cardiac muscle cell apoptotic process" evidence=IMP

GO:0014044 "Schwann cell development" evidence=ISO

GO:0014912 "negative regulation of smooth muscle cell migration" evidence=IMP

GO:0017124 "SH3 domain binding" evidence=IDA

GO:0018105 "peptidyl-serine phosphorylation" evidence=ISO;IMP

GO:0019901 "protein kinase binding" evidence=IEA;ISO

GO:0019904 "protein domain specific binding" evidence=IC

GO:0021675 "nerve development" evidence=ISO

GO:0022011 "myelination in peripheral nervous system" evidence=ISO

GO:0030017 "sarcomere" evidence=IEA

GO:0030027 "lamellipodium" evidence=IEA;ISO

GO:0030030 "cell projection organization" evidence=ISO

GO:0030335 "positive regulation of cell migration" evidence=IMP

GO:0030424 "axon" evidence=IDA

GO:0030513 "positive regulation of BMP signaling pathway" evidence=IEA;ISO

GO:0032288 "myelin assembly" evidence=IMP

GO:0032956 "regulation of actin cytoskeleton organization" evidence=IMP

GO:0034446 "substrate adhesion-dependent cell spreading" evidence=ISO;IMP

GO:0042327 "positive regulation of phosphorylation" evidence=ISO

GO:0043025 "neuronal cell body" evidence=IDA

GO:0043034 "costamere" evidence=IDA

GO:0043066 "negative regulation of apoptotic process" evidence=IMP

GO:0043195 "terminal bouton" evidence=IDA

GO:0043198 "dendritic shaft" evidence=IDA

GO:0043206 "extracellular fibril organization" evidence=IMP

GO:0043234 "protein complex" evidence=IDA

GO:0043406 "positive regulation of MAP kinase activity" evidence=IMP

GO:0043410 "positive regulation of MAPK cascade" evidence=IMP

GO:0043491 "protein kinase B signaling cascade" evidence=ISO

GO:0043524 "negative regulation of neuron apoptotic process" evidence=IMP

GO:0045197 "establishment or maintenance of epithelial cell apical/basal polarity" evidence=IEA;ISO

GO:0045663 "positive regulation of myoblast differentiation" evidence=IMP

GO:0045669 "positive regulation of osteoblast differentiation" evidence=IEA;ISO

GO:0045773 "positive regulation of axon extension" evidence=IMP

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IEA;ISO

GO:0048662 "negative regulation of smooth muscle cell proliferation" evidence=IMP

GO:0048812 "neuron projection morphogenesis" evidence=IMP

GO:0050772 "positive regulation of axonogenesis" evidence=IMP

GO:0050775 "positive regulation of dendrite morphogenesis" evidence=IMP

GO:0051291 "protein heterooligomerization" evidence=IDA;IPI

GO:0051897 "positive regulation of protein kinase B signaling cascade" evidence=IMP

GO:0090263 "positive regulation of canonical Wnt receptor signaling pathway" evidence=IEA;ISO

GO:0001725 "stress fiber" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
O55222	ILK_MOUSE	2, ., 7, ., 1, 1, ., 1	0.7419	0.8104	0.2743	yes	N/A
Q5R5V4	ILK_PONAB	2, ., 7, ., 1, 1, ., 1	0.7338	0.8104	0.2743	yes	N/A
Q13418	ILK_HUMAN	2, ., 7, ., 1, 1, ., 1	0.7419	0.8104	0.2743	yes	N/A
P57044	ILK_CAVPO	2, ., 7, ., 1, 1, ., 1	0.7338	0.8039	0.2727	yes	N/A
Q3SWY2	ILK_BOVIN	2, ., 7, ., 1, 1, ., 1	0.7419	0.8104	0.2743	yes	N/A
Q99J82	ILK_RAT	2, ., 7, ., 1, 1, ., 1	0.7419	0.8104	0.2743	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	153
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	3e-19
cd00192	262	cd00192, PTKc, Catalytic domain of Protein Tyrosin	2e-17
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	4e-17
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	2e-16
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	5e-16
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	5e-15
cd05046	275	cd05046, PTK_CCK4, Pseudokinase domain of the Prot	1e-13
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	3e-13
cd08530	256	cd08530, STKc_CNK2-like, Catalytic domain of the P	3e-13
cd05064	266	cd05064, PTKc_EphR_A10, Catalytic domain of the Pr	4e-13
cd06610	267	cd06610, STKc_OSR1_SPAK, Catalytic domain of the P	4e-13
cd05043	280	cd05043, PTK_Ryk, Pseudokinase domain of Ryk (Rece	5e-13
cd08215	258	cd08215, STKc_Nek, Catalytic domain of the Protein	9e-13
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	2e-12
cd05053	293	cd05053, PTKc_FGFR, Catalytic domain of the Protei	4e-12
cd05063	268	cd05063, PTKc_EphR_A2, Catalytic domain of the Pro	5e-12
cd05033	266	cd05033, PTKc_EphR, Catalytic domain of Ephrin Rec	6e-12
cd05062	277	cd05062, PTKc_IGF-1R, Catalytic domain of the Prot	6e-12
cd05044	269	cd05044, PTKc_c-ros, Catalytic domain of the Prote	7e-12
cd08217	265	cd08217, STKc_Nek2, Catalytic domain of the Protei	7e-12
cd05066	267	cd05066, PTKc_EphR_A, Catalytic domain of the Prot	1e-11
cd05061	288	cd05061, PTKc_InsR, Catalytic domain of the Protei	3e-11
cd06632	258	cd06632, STKc_MEKK1_plant, Catalytic domain of the	3e-11
cd06625	263	cd06625, STKc_MEKK3_like, Catalytic domain of MAP/	4e-11
cd05099	314	cd05099, PTKc_FGFR4, Catalytic domain of the Prote	4e-11
cd06614	286	cd06614, STKc_PAK, Catalytic domain of the Protein	7e-11
cd06627	254	cd06627, STKc_Cdc7_like, Catalytic domain of Cell	8e-11
cd05032	277	cd05032, PTKc_InsR_like, Catalytic domain of Insul	9e-11
cd05098	307	cd05098, PTKc_FGFR1, Catalytic domain of the Prote	1e-10
cd05039	256	cd05039, PTKc_Csk_like, Catalytic domain of C-term	1e-10
cd05041	251	cd05041, PTKc_Fes_like, Catalytic domain of Fes-li	2e-10
cd05058	262	cd05058, PTKc_Met_Ron, Catalytic domain of the Pro	2e-10
cd06609	274	cd06609, STKc_MST3_like, Catalytic domain of Mamma	2e-10
cd05069	260	cd05069, PTKc_Yes, Catalytic domain of the Protein	3e-10
cd05580	290	cd05580, STKc_PKA, Catalytic domain of the Protein	3e-10
cd05123	250	cd05123, STKc_AGC, Catalytic domain of AGC family	4e-10
cd05040	257	cd05040, PTKc_Ack_like, Catalytic domain of the Pr	6e-10
cd05056	270	cd05056, PTKc_FAK, Catalytic domain of the Protein	8e-10
cd05100	334	cd05100, PTKc_FGFR3, Catalytic domain of the Prote	1e-09
cd05101	304	cd05101, PTKc_FGFR2, Catalytic domain of the Prote	1e-09
cd05084	252	cd05084, PTKc_Fes, Catalytic domain of the Protein	2e-09
cd05072	261	cd05072, PTKc_Lyn, Catalytic domain of the Protein	2e-09
cd05083	254	cd05083, PTKc_Chk, Catalytic domain of the Protein	3e-09
cd05068	261	cd05068, PTKc_Frk_like, Catalytic domain of Fyn-re	4e-09
cd05045	290	cd05045, PTKc_RET, Catalytic domain of the Protein	4e-09
cd05036	277	cd05036, PTKc_ALK_LTK, Catalytic domain of the Pro	5e-09
cd05082	256	cd05082, PTKc_Csk, Catalytic domain of the Protein	5e-09
PTZ00267	478	PTZ00267, PTZ00267, NIMA-related protein kinase; P	5e-09
cd08529	256	cd08529, STKc_FA2-like, Catalytic domain of the Pr	6e-09
cd06642	277	cd06642, STKc_STK25-YSK1, Catalytic domain of the	7e-09
cd05034	261	cd05034, PTKc_Src_like, Catalytic domain of Src ki	7e-09
PTZ00283	496	PTZ00283, PTZ00283, serine/threonine protein kinas	8e-09
cd05088	303	cd05088, PTKc_Tie2, Catalytic domain of the Protei	8e-09
cd05067	260	cd05067, PTKc_Lck_Blk, Catalytic domain of the Pro	8e-09
cd06623	264	cd06623, PKc_MAPKK_plant_like, Catalytic domain of	9e-09
cd05051	296	cd05051, PTKc_DDR, Catalytic domain of the Protein	1e-08
cd06611	280	cd06611, STKc_SLK_like, Catalytic domain of Ste20-	1e-08
cd06640	277	cd06640, STKc_MST4, Catalytic domain of the Protei	1e-08
cd05065	269	cd05065, PTKc_EphR_B, Catalytic domain of the Prot	2e-08
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	2e-08
cd05050	288	cd05050, PTKc_Musk, Catalytic domain of the Protei	2e-08
cd06648	285	cd06648, STKc_PAK_II, Catalytic domain of the Prot	2e-08
cd06613	262	cd06613, STKc_MAP4K3_like, Catalytic domain of Mit	2e-08
cd08221	256	cd08221, STKc_Nek9, Catalytic domain of the Protei	2e-08
cd05070	260	cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Pro	4e-08
cd06645	267	cd06645, STKc_MAP4K3, Catalytic domain of the Prot	4e-08
cd05071	262	cd05071, PTKc_Src, Catalytic domain of the Protein	5e-08
cd06641	277	cd06641, STKc_MST3, Catalytic domain of the Protei	6e-08
cd05059	256	cd05059, PTKc_Tec_like, Catalytic domain of Tec-li	6e-08
cd05038	284	cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai	7e-08
cd05060	257	cd05060, PTKc_Syk_like, Catalytic domain of Spleen	8e-08
cd05572	262	cd05572, STKc_cGK_PKG, Catalytic domain of the Pro	8e-08
cd05114	256	cd05114, PTKc_Tec_Rlk, Catalytic domain of the Pro	1e-07
cd05052	263	cd05052, PTKc_Abl, Catalytic domain of the Protein	1e-07
cd05148	261	cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro	2e-07
cd06638	286	cd06638, STKc_myosinIIIA, Catalytic domain of the	2e-07
cd06646	267	cd06646, STKc_MAP4K5, Catalytic domain of the Prot	3e-07
cd05077	262	cd05077, PTK_Jak1_rpt1, Pseudokinase (repeat 1) do	3e-07
cd05107	401	cd05107, PTKc_PDGFR_beta, Catalytic domain of the	3e-07
cd06612	256	cd06612, STKc_MST1_2, Catalytic domain of the Prot	3e-07
cd08229	267	cd08229, STKc_Nek7, Catalytic domain of the Protei	3e-07
cd06631	265	cd06631, STKc_YSK4, Catalytic domain of the Protei	3e-07
PTZ00263	329	PTZ00263, PTZ00263, protein kinase A catalytic sub	3e-07
cd05037	259	cd05037, PTK_Jak_rpt1, Pseudokinase (repeat 1) dom	4e-07
cd05104	375	cd05104, PTKc_Kit, Catalytic domain of the Protein	4e-07
cd05113	256	cd05113, PTKc_Btk_Bmx, Catalytic domain of the Pro	5e-07
cd05035	273	cd05035, PTKc_Axl_like, Catalytic Domain of Axl-li	6e-07
cd05102	338	cd05102, PTKc_VEGFR3, Catalytic domain of the Prot	8e-07
cd05055	302	cd05055, PTKc_PDGFR, Catalytic domain of the Prote	1e-06
cd08222	260	cd08222, STKc_Nek11, Catalytic domain of the Prote	1e-06
cd05581	280	cd05581, STKc_PDK1, Catalytic domain of the Protei	1e-06
cd05579	265	cd05579, STKc_MAST_like, Catalytic domain of Micro	1e-06
cd05089	297	cd05089, PTKc_Tie1, Catalytic domain of the Protei	1e-06
cd06628	267	cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o	1e-06
cd05047	270	cd05047, PTKc_Tie, Catalytic domain of Tie Protein	2e-06
cd06624	268	cd06624, STKc_ASK, Catalytic domain of the Protein	2e-06
cd06644	292	cd06644, STKc_STK10_LOK, Catalytic domain of the P	2e-06
cd06618	296	cd06618, PKc_MKK7, Catalytic domain of the dual-sp	2e-06
cd06608	275	cd06608, STKc_myosinIII_like, Catalytic domain of	3e-06
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	3e-06
cd05103	343	cd05103, PTKc_VEGFR2, Catalytic domain of the Prot	3e-06
cd05598	376	cd05598, STKc_LATS, Catalytic domain of the Protei	3e-06
cd05085	250	cd05085, PTKc_Fer, Catalytic domain of the Protein	3e-06
cd06917	277	cd06917, STKc_NAK1_like, Catalytic domain of Funga	3e-06
cd05112	256	cd05112, PTKc_Itk, Catalytic domain of the Protein	3e-06
cd06620	284	cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of	3e-06
cd05079	284	cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) doma	4e-06
cd05573	350	cd05573, STKc_ROCK_NDR_like, Catalytic domain of R	4e-06
cd06652	265	cd06652, STKc_MEKK2, Catalytic domain of the Prote	5e-06
cd08228	267	cd08228, STKc_Nek6, Catalytic domain of the Protei	6e-06
cd05074	273	cd05074, PTKc_Tyro3, Catalytic domain of the Prote	7e-06
cd06658	292	cd06658, STKc_PAK5, Catalytic domain of the Protei	8e-06
cd05078	258	cd05078, PTK_Jak2_Jak3_rpt1, Pseudokinase (repeat	9e-06
cd06659	297	cd06659, STKc_PAK6, Catalytic domain of the Protei	1e-05
cd06653	264	cd06653, STKc_MEKK3_like_1, Catalytic domain of MA	1e-05
cd06626	264	cd06626, STKc_MEKK4, Catalytic domain of the Prote	1e-05
cd06643	282	cd06643, STKc_SLK, Catalytic domain of the Protein	1e-05
cd05075	272	cd05075, PTKc_Axl, Catalytic domain of the Protein	1e-05
cd08224	267	cd08224, STKc_Nek6_Nek7, Catalytic domain of the P	1e-05
cd06657	292	cd06657, STKc_PAK4, Catalytic domain of the Protei	2e-05
cd05097	295	cd05097, PTKc_DDR_like, Catalytic domain of Discoi	2e-05
cd05116	257	cd05116, PTKc_Syk, Catalytic domain of the Protein	2e-05
cd05585	312	cd05585, STKc_YPK1_like, Catalytic domain of Yeast	2e-05
cd06651	266	cd06651, STKc_MEKK3, Catalytic domain of the Prote	2e-05
cd05080	283	cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) doma	2e-05
cd05105	400	cd05105, PTKc_PDGFR_alpha, Catalytic domain of the	3e-05
cd05076	274	cd05076, PTK_Tyk2_rpt1, Pseudokinase (repeat 1) do	3e-05
cd08225	257	cd08225, STKc_Nek5, Catalytic domain of the Protei	3e-05
cd05048	283	cd05048, PTKc_Ror, Catalytic Domain of the Protein	3e-05
cd05057	279	cd05057, PTKc_EGFR_like, Catalytic domain of Epide	3e-05
PHA02988	283	PHA02988, PHA02988, hypothetical protein; Provisio	3e-05
cd05625	382	cd05625, STKc_LATS1, Catalytic domain of the Prote	3e-05
cd06622	286	cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of	4e-05
cd05612	291	cd05612, STKc_PRKX_like, Catalytic domain of PRKX-	4e-05
cd06634	308	cd06634, STKc_TAO2, Catalytic domain of the Protei	4e-05
cd05106	374	cd05106, PTKc_CSF-1R, Catalytic domain of the Prot	4e-05
cd08220	256	cd08220, STKc_Nek8, Catalytic domain of the Protei	6e-05
cd05081	284	cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2)	7e-05
cd05054	337	cd05054, PTKc_VEGFR, Catalytic domain of the Prote	7e-05
cd05049	280	cd05049, PTKc_Trk, Catalytic domain of the Protein	7e-05
cd06654	296	cd06654, STKc_PAK1, Catalytic domain of the Protei	8e-05
cd05073	260	cd05073, PTKc_Hck, Catalytic domain of the Protein	9e-05
cd06639	291	cd06639, STKc_myosinIIIB, Catalytic domain of the	1e-04
cd05611	260	cd05611, STKc_Rim15_like, Catalytic domain of fung	1e-04
cd05090	283	cd05090, PTKc_Ror1, Catalytic domain of the Protei	1e-04
cd05626	381	cd05626, STKc_LATS2, Catalytic domain of the Prote	1e-04
cd08223	257	cd08223, STKc_Nek4, Catalytic domain of the Protei	2e-04
cd06656	297	cd06656, STKc_PAK3, Catalytic domain of the Protei	2e-04
cd05092	280	cd05092, PTKc_TrkA, Catalytic domain of the Protei	2e-04
cd06655	296	cd06655, STKc_PAK2, Catalytic domain of the Protei	2e-04
cd06635	317	cd06635, STKc_TAO1, Catalytic domain of the Protei	3e-04
cd06605	265	cd06605, PKc_MAPKK, Catalytic domain of the dual-s	4e-04
cd06630	268	cd06630, STKc_MEKK1, Catalytic domain of the Prote	4e-04
cd05614	332	cd05614, STKc_MSK2_N, N-terminal catalytic domain	4e-04
cd08226	328	cd08226, PK_STRAD_beta, Pseudokinase domain of STE	4e-04
cd05108	316	cd05108, PTKc_EGFR, Catalytic domain of the Protei	4e-04
cd05096	304	cd05096, PTKc_DDR1, Catalytic domain of the Protei	4e-04
cd08528	269	cd08528, STKc_Nek10, Catalytic domain of the Prote	6e-04
cd06629	272	cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o	7e-04
cd05109	279	cd05109, PTKc_HER2, Catalytic domain of the Protei	7e-04
cd05583	288	cd05583, STKc_MSK_N, N-terminal catalytic domain o	8e-04
cd05091	283	cd05091, PTKc_Ror2, Catalytic domain of the Protei	8e-04
cd05095	296	cd05095, PTKc_DDR2, Catalytic domain of the Protei	9e-04
cd05570	318	cd05570, STKc_PKC, Catalytic domain of the Protein	0.001
cd05592	316	cd05592, STKc_nPKC_theta_delta, Catalytic domain o	0.001
cd05617	327	cd05617, STKc_aPKC_zeta, Catalytic domain of the P	0.001
cd05616	323	cd05616, STKc_cPKC_beta, Catalytic domain of the P	0.001
cd05094	291	cd05094, PTKc_TrkC, Catalytic domain of the Protei	0.002
cd05593	328	cd05593, STKc_PKB_gamma, Catalytic domain of the P	0.002
cd05627	360	cd05627, STKc_NDR2, Catalytic domain of the Protei	0.002
cd08227	327	cd08227, PK_STRAD_alpha, Pseudokinase domain of ST	0.002
cd05628	363	cd05628, STKc_NDR1, Catalytic domain of the Protei	0.002
cd06647	293	cd06647, STKc_PAK_I, Catalytic domain of the Prote	0.003
cd05602	325	cd05602, STKc_SGK1, Catalytic domain of the Protei	0.003
cd05575	323	cd05575, STKc_SGK, Catalytic domain of the Protein	0.003
cd05610	669	cd05610, STKc_MASTL, Catalytic domain of the Prote	0.004
smart00750	176	smart00750, KIND, kinase non-catalytic C-lobe doma	0.004
cd05622	371	cd05622, STKc_ROCK1, Catalytic domain of the Prote	0.004
cd05595	323	cd05595, STKc_PKB_beta, Catalytic domain of the Pr	0.004
cd05582	318	cd05582, STKc_RSK_N, N-terminal catalytic domain o	0.004

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score = 80.6 bits (200), Expect = 3e-19
 Identities = 32/93 (34%), Positives = 50/93 (53%), Gaps = 5/93 (5%)

Query: 57  WMSPEALQKKPGDRNLEACDMWSFAVLLWELATR-EVPFADLTPMEVGMKVALEGLRITI 115
           WM+PE+L+     +     D+WSF VLLWE+ T  E P+  ++  EV +++  +G R+  
Sbjct: 170 WMAPESLKDG---KFTSKSDVWSFGVLLWEIFTLGEQPYPGMSNEEV-LELLEDGYRLPR 225

Query: 116 PPGISSHLSKLIRICMNEDPGKRPTFDMVLPIL 148
           P      L +L+  C   DP  RPTF  ++  L
Sbjct: 226 PENCPDELYELMLQCWAYDPEDRPTFSELVEDL 258

Length = 258

>gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases

 Score = 76.0 bits (188), Expect = 2e-17
 Identities = 33/95 (34%), Positives = 49/95 (51%), Gaps = 7/95 (7%)

Query: 57  WMSPEALQKKPGDRNL-EACDMWSFAVLLWELATR-EVPFADLTPMEVGMKVALEGLRIT 114
           WM+PE+L+    D       D+WSF VLLWE+ T    P+  L+  EV ++   +G R+ 
Sbjct: 173 WMAPESLK----DGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEEV-LEYLRKGYRLP 227

Query: 115 IPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILD 149
            P      L +L+  C   DP  RPTF  ++  L+
Sbjct: 228 KPEYCPDELYELMLSCWQLDPEDRPTFSELVERLE 262

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score = 74.9 bits (185), Expect = 4e-17
 Identities = 41/130 (31%), Positives = 66/130 (50%), Gaps = 13/130 (10%)

Query: 27  CQIDEDLTARI-------NMADAQFSFQQRGRCYYPAWMSPEALQKKPGDRNLEACDMWS 79
           C + E+L  +I       ++ D  +  ++ G+     WM+PE+L++    +     D+WS
Sbjct: 133 CLVGENLVVKISDFGLSRDLYDDDYYRKRGGKLPI-RWMAPESLKEG---KFTSKSDVWS 188

Query: 80  FAVLLWELATR-EVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKR 138
           F VLLWE+ T  E P+  ++  EV ++    G R+  PP     L  L+  C  EDP  R
Sbjct: 189 FGVLLWEIFTLGEQPYPGMSNEEV-LEYLKNGYRLPQPPNCPPELYDLMLQCWAEDPEDR 247

Query: 139 PTFDMVLPIL 148
           PTF  ++ IL
Sbjct: 248 PTFSELVEIL 257

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score = 73.4 bits (181), Expect = 2e-16
 Identities = 44/131 (33%), Positives = 65/131 (49%), Gaps = 15/131 (11%)

Query: 27  CQIDEDLTARINMADAQFSFQQRGRCYYPA--------WMSPEALQKKPGDRNLEACDMW 78
           C + E+L  +I  +D   S       YY          WM+PE+L++    +     D+W
Sbjct: 134 CLVGENLVVKI--SDFGLSRDLYDDDYYKVKGGKLPIRWMAPESLKEG---KFTSKSDVW 188

Query: 79  SFAVLLWELATR-EVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGK 137
           SF VLLWE+ T  E P+  ++  EV ++   +G R+  PP     L KL+  C  EDP  
Sbjct: 189 SFGVLLWEIFTLGEEPYPGMSNAEV-LEYLKKGYRLPKPPNCPPELYKLMLQCWAEDPED 247

Query: 138 RPTFDMVLPIL 148
           RPTF  ++ IL
Sbjct: 248 RPTFSELVEIL 258

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score = 71.8 bits (177), Expect = 5e-16
 Identities = 31/93 (33%), Positives = 43/93 (46%), Gaps = 5/93 (5%)

Query: 55  PAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRIT 114
           P +M+PE L  K   +   A D+WS  V+L+EL T + PF     +    K   +     
Sbjct: 160 PEYMAPEVLLGKGYGK---AVDIWSLGVILYELLTGKPPFPGDDQLLELFKKIGKPKPPF 216

Query: 115 IPP--GISSHLSKLIRICMNEDPGKRPTFDMVL 145
            PP   IS     LIR  + +DP KR T +  L
Sbjct: 217 PPPEWDISPEAKDLIRKLLVKDPEKRLTAEEAL 249

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score = 69.2 bits (170), Expect = 5e-15
 Identities = 31/92 (33%), Positives = 47/92 (51%), Gaps = 14/92 (15%)

Query: 55  PAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRIT 114
           P WM+PE +  KP D      D+WS  +   ELA  + P+++L PM+   K+A  G    
Sbjct: 161 PYWMAPEVINGKPYD---YKADIWSLGITAIELAEGKPPYSELPPMKALFKIATNG---- 213

Query: 115 IPPGI------SSHLSKLIRICMNEDPGKRPT 140
            PPG+      S      ++ C+ ++P KRPT
Sbjct: 214 -PPGLRNPEKWSDEFKDFLKKCLQKNPEKRPT 244

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|133178 cd05046, PTK_CCK4, Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

 Score = 65.9 bits (161), Expect = 1e-13
 Identities = 33/87 (37%), Positives = 50/87 (57%), Gaps = 4/87 (4%)

Query: 57  WMSPEALQKKPGDRNLEACDMWSFAVLLWELATR-EVPFADLTPMEVGMKVALEGLRITI 115
           W++PEA+Q+   D      D+WSF VL+WE+ T+ E+PF  L+  EV  ++    L + +
Sbjct: 184 WLAPEAVQE---DDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEEVLNRLQAGKLELPV 240

Query: 116 PPGISSHLSKLIRICMNEDPGKRPTFD 142
           P G  S L KL+  C   +P  RP+F 
Sbjct: 241 PEGCPSRLYKLMTRCWAVNPKDRPSFS 267

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is still unknown. Other pseudokinases such as HER3 rely on the activity of partner RTKs. Length = 275

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score = 64.5 bits (158), Expect = 3e-13
 Identities = 35/125 (28%), Positives = 56/125 (44%), Gaps = 11/125 (8%)

Query: 29  IDEDLTARI-------NMADAQFSFQQRGRCYYPAWMSPEALQKKPGDRNLEACDMWSFA 81
           +D D   ++        + D +           P WM+PE ++ +   R   A D+WS  
Sbjct: 134 VDSDGVVKLADFGCAKRLGDIETGEGTGSVRGTPYWMAPEVIRGEEYGR---AADIWSLG 190

Query: 82  VLLWELATREVPFADLT-PMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPT 140
             + E+AT + P+++L  PM    K+   G    IP  +S      +R C+  DP KRPT
Sbjct: 191 CTVIEMATGKPPWSELGNPMAALYKIGSSGEPPEIPEHLSEEAKDFLRKCLRRDPKKRPT 250

Query: 141 FDMVL 145
            D +L
Sbjct: 251 ADELL 255

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

 Score = 64.4 bits (157), Expect = 3e-13
 Identities = 30/91 (32%), Positives = 42/91 (46%), Gaps = 4/91 (4%)

Query: 55  PAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRIT 114
           P +M+PE  + +P        D+WS   LL+E+AT   PF   +  ++  KV   G    
Sbjct: 165 PHYMAPEVWKGRPYSYK---SDIWSLGCLLYEMATFAPPFEARSMQDLRYKV-QRGKYPP 220

Query: 115 IPPGISSHLSKLIRICMNEDPGKRPTFDMVL 145
           IPP  S  L   IR  +   P  RP  D +L
Sbjct: 221 IPPIYSQDLQNFIRSMLQVKPKLRPNCDKIL 251

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256

>gnl|CDD|133195 cd05064, PTKc_EphR_A10, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

 Score = 64.2 bits (156), Expect = 4e-13
 Identities = 31/96 (32%), Positives = 53/96 (55%), Gaps = 5/96 (5%)

Query: 57  WMSPEALQKKPGDRNLEACDMWSFAVLLWE-LATREVPFADLTPMEVGMKVALEGLRITI 115
           W +PEA+Q         A D+WSF +++WE ++  E P+ D++  +V +K   +G R+  
Sbjct: 174 WAAPEAIQYH---HFSSASDVWSFGIVMWEVMSYGERPYWDMSGQDV-IKAVEDGFRLPA 229

Query: 116 PPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKM 151
           P    + L +L+  C  ++ G+RP F  +  IL KM
Sbjct: 230 PRNCPNLLHQLMLDCWQKERGERPRFSQIHSILSKM 265

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). EphA10, which contains an inactive tyr kinase domain, may function to attenuate signals of co-clustered active receptors. EphA10 is mainly expressed in the testis. Ephrin/EphR interaction results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266

>gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

 Score = 64.3 bits (157), Expect = 4e-13
 Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 6/90 (6%)

Query: 55  PAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKV---ALEGL 111
           P WM+PE +++  G  + +A D+WSF +   ELAT   P++   PM+V M         L
Sbjct: 170 PCWMAPEVMEQVHG-YDFKA-DIWSFGITAIELATGAAPYSKYPPMKVLMLTLQNDPPSL 227

Query: 112 RITIPPGISSHL-SKLIRICMNEDPGKRPT 140
                    S    K+I +C+ +DP KRPT
Sbjct: 228 ETGADYKKYSKSFRKMISLCLQKDPSKRPT 257

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267

>gnl|CDD|133175 cd05043, PTK_Ryk, Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

 Score = 64.0 bits (156), Expect = 5e-13
 Identities = 41/137 (29%), Positives = 61/137 (44%), Gaps = 26/137 (18%)

Query: 27  CQIDEDLTARINMADAQFSFQQRGRCYYPA--------------WMSPEALQKKPGDRNL 72
           C IDE+L  +I   D   S     R  +P               WM+ E+L  K      
Sbjct: 148 CVIDEELQVKI--TDNALS-----RDLFPMDYHCLGDNENRPVKWMALESLVNKEYS--- 197

Query: 73  EACDMWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICM 131
            A D+WSF VLLWEL T  + P+ ++ P E+   +  +G R+  P      L  ++  C 
Sbjct: 198 SASDVWSFGVLLWELMTLGQTPYVEIDPFEMAAYLK-DGYRLAQPINCPDELFAVMACCW 256

Query: 132 NEDPGKRPTFDMVLPIL 148
             DP +RP+F  ++  L
Sbjct: 257 ALDPEERPSFSQLVQCL 273

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It acts as a chemorepulsive axon guidance receptor of Wnt glycoproteins and is responsible for the establishment of axon tracts during the development of the central nervous system. In addition, studies in mice reveal that Ryk is essential in skeletal, craniofacial, and cardiac development. Thus, it appears Ryk is involved in signal transduction despite its lack of kinase activity. Ryk may function as an accessory protein that modulates the signals coming from catalytically active partner RTKs such as the Eph receptors. Length = 280

>gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

 Score = 63.3 bits (155), Expect = 9e-13
 Identities = 30/86 (34%), Positives = 47/86 (54%), Gaps = 4/86 (4%)

Query: 55  PAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRIT 114
           P ++SPE  Q KP +      D+WS   +L+EL T + PF     +E+ +K+ L+G    
Sbjct: 167 PYYLSPELCQNKPYN---YKSDIWSLGCVLYELCTLKHPFEGENLLELALKI-LKGQYPP 222

Query: 115 IPPGISSHLSKLIRICMNEDPGKRPT 140
           IP   SS L  L+   + +DP +RP+
Sbjct: 223 IPSQYSSELRNLVSSLLQKDPEERPS 248

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score = 62.7 bits (153), Expect = 2e-12
 Identities = 27/101 (26%), Positives = 42/101 (41%), Gaps = 7/101 (6%)

Query: 50  GRCYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALE 109
                P +M+PE L    G       D+WS  V+L+EL T + PF+    ++    +   
Sbjct: 157 TFVGTPWYMAPEVLLGGNGY--GPKVDVWSLGVILYELLTGKPPFSGENILDQLQLIRRI 214

Query: 110 GLRITIPPGISSHLS-----KLIRICMNEDPGKRPTFDMVL 145
                                LI+ C+N+DP KRPT + +L
Sbjct: 215 LGPPLEFDEPKWSSGSEEAKDLIKKCLNKDPSKRPTAEEIL 255

Length = 260

>gnl|CDD|173634 cd05053, PTKc_FGFR, Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

 Score = 61.7 bits (150), Expect = 4e-12
 Identities = 39/97 (40%), Positives = 54/97 (55%), Gaps = 7/97 (7%)

Query: 57  WMSPEALQKKPGDRNL-EACDMWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRIT 114
           WM+PEAL     DR      D+WSF VLLWE+ T    P+  + P+E   K+  EG R+ 
Sbjct: 200 WMAPEALF----DRVYTHQSDVWSFGVLLWEIFTLGGSPYPGI-PVEELFKLLKEGYRME 254

Query: 115 IPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKM 151
            P   +  L  L+R C +E P +RPTF  ++  LD+M
Sbjct: 255 KPQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRM 291

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, and intracellular signaling. There are at least 23 FGFs and four types of FGFRs. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. FGF/FGFR signaling is important in the regulation of embryonic development, homeostasis, and regenerative processes. Depending on the cell type and stage, FGFR signaling produces diverse cellular responses including proliferation, growth arrest, differentiation, and apoptosis. Aberrant signaling leads to many human diseases such as skeletal, olfactory, and metabolic disorders, as well as cancer. Length = 293

>gnl|CDD|133194 cd05063, PTKc_EphR_A2, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

 Score = 61.1 bits (148), Expect = 5e-12
 Identities = 35/126 (27%), Positives = 67/126 (53%), Gaps = 5/126 (3%)

Query: 27  CQIDEDLTARINMADAQFSFQQRGRCYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWE 86
           C++ +   +R+   D + ++   G      W +PEA+  +   +   A D+WSF +++WE
Sbjct: 146 CKVSDFGLSRVLEDDPEGTYTTSGGKIPIRWTAPEAIAYR---KFTSASDVWSFGIVMWE 202

Query: 87  LATR-EVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVL 145
           + +  E P+ D++  EV MK   +G R+  P    S + +L+  C  +D  +RP F  ++
Sbjct: 203 VMSFGERPYWDMSNHEV-MKAINDGFRLPAPMDCPSAVYQLMLQCWQQDRARRPRFVDIV 261

Query: 146 PILDKM 151
            +LDK+
Sbjct: 262 NLLDKL 267

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. The EphA2 receptor is overexpressed in tumor cells and tumor blood vessels in a variety of cancers including breast, prostate, lung, and colon. As a result, it is an attractive target for drug design since its inhibition could affect several aspects of tumor progression. Length = 268

>gnl|CDD|133165 cd05033, PTKc_EphR, Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

 Score = 60.8 bits (148), Expect = 6e-12
 Identities = 32/96 (33%), Positives = 55/96 (57%), Gaps = 5/96 (5%)

Query: 57  WMSPEALQKKPGDRNLEACDMWSFAVLLWE-LATREVPFADLTPMEVGMKVALEGLRITI 115
           W +PEA+  +   +   A D+WSF +++WE ++  E P+ D++  +V +K   +G R+  
Sbjct: 174 WTAPEAIAYR---KFTSASDVWSFGIVMWEVMSYGERPYWDMSNQDV-IKAVEDGYRLPP 229

Query: 116 PPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKM 151
           P    S L +L+  C  +D  +RPTF  ++  LDKM
Sbjct: 230 PMDCPSALYQLMLDCWQKDRNERPTFSQIVSTLDKM 265

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. This allows ephrin/EphR dimers to form, leading to the activation of the intracellular tyr kinase domain. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). The main effect of ephrin/EphR interaction is cell-cell repulsion or adhesion. Ephrin/EphR signaling is important in neural development and plasticity, cell morphogenesis and proliferation, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266

>gnl|CDD|133193 cd05062, PTKc_IGF-1R, Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

 Score = 61.2 bits (148), Expect = 6e-12
 Identities = 44/151 (29%), Positives = 76/151 (50%), Gaps = 17/151 (11%)

Query: 11  YLNSKKSKTSNAFLFCCQIDEDLTARI-------NMADAQFSFQQRGRCYYPA-WMSPEA 62
           YLN+ K    +     C + ED T +I       ++ +  + +++ G+   P  WMSPE+
Sbjct: 134 YLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDY-YRKGGKGLLPVRWMSPES 192

Query: 63  LQKKPGDRNLEACDMWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISS 121
           L+           D+WSF V+LWE+AT  E P+  ++  +V ++  +EG  +  P     
Sbjct: 193 LKDGVFTTY---SDVWSFGVVLWEIATLAEQPYQGMSNEQV-LRFVMEGGLLDKPDNCPD 248

Query: 122 HLSKLIRICMNEDPGKRPTFDMVLPILDKMK 152
            L +L+R+C   +P  RP+F   L I+  +K
Sbjct: 249 MLFELMRMCWQYNPKMRPSF---LEIISSIK 276

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, where it is frequently overexpressed, IGF-1R is implicated in proliferation, the suppression of apoptosis, invasion, and metastasis. IGF-1R is being developed as a therapeutic target in cancer treatment. Length = 277

>gnl|CDD|173630 cd05044, PTKc_c-ros, Catalytic domain of the Protein Tyrosine Kinase, C-ros

 Score = 61.0 bits (148), Expect = 7e-12
 Identities = 36/105 (34%), Positives = 55/105 (52%), Gaps = 6/105 (5%)

Query: 46  FQQRGRCYYPA-WMSPEALQKKPGDRNLEACDMWSFAVLLWELAT-REVPFADLTPMEVG 103
           +++ G    P  WM+PE+L    G    ++ D+WSF VL+WE+ T  + P+  L   EV 
Sbjct: 167 YRKEGEGLLPVRWMAPESLLD--GKFTTQS-DVWSFGVLMWEILTLGQQPYPALNNQEVL 223

Query: 104 MKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPIL 148
             V   G R+  P      + +L+  C  +DP +RPTFD +  IL
Sbjct: 224 QHVTAGG-RLQKPENCPDKIYQLMTNCWAQDPSERPTFDRIQEIL 267

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male mice bearing inactive mutations of c-ros lack the initial segment of the epididymis and are infertile. The Drosophila protein, Sevenless, is required for the specification of the R7 photoreceptor cell during eye development. Length = 269

>gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

 Score = 60.7 bits (148), Expect = 7e-12
 Identities = 31/86 (36%), Positives = 45/86 (52%), Gaps = 4/86 (4%)

Query: 55  PAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRIT 114
           P +MSPE L     D   E  D+WS   L++EL     PF     +++  K+  EG    
Sbjct: 174 PYYMSPEQLNHMSYD---EKSDIWSLGCLIYELCALSPPFTARNQLQLASKIK-EGKFRR 229

Query: 115 IPPGISSHLSKLIRICMNEDPGKRPT 140
           IP   SS L+++I+  +N DP KRP+
Sbjct: 230 IPYRYSSELNEVIKSMLNVDPDKRPS 255

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265

>gnl|CDD|173639 cd05066, PTKc_EphR_A, Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

 Score = 60.3 bits (146), Expect = 1e-11
 Identities = 34/126 (26%), Positives = 69/126 (54%), Gaps = 5/126 (3%)

Query: 27  CQIDEDLTARINMADAQFSFQQRGRCYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWE 86
           C++ +   +R+   D + ++  RG      W +PEA+  +   +   A D+WS+ +++WE
Sbjct: 145 CKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYR---KFTSASDVWSYGIVMWE 201

Query: 87  LATR-EVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVL 145
           + +  E P+ +++  +V +K   EG R+  P    + L +L+  C  +D  +RP F+ ++
Sbjct: 202 VMSYGERPYWEMSNQDV-IKAIEEGYRLPAPMDCPAALHQLMLDCWQKDRNERPKFEQIV 260

Query: 146 PILDKM 151
            ILDK+
Sbjct: 261 SILDKL 266

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. EphARs and ephrin-A ligands are expressed in multiple areas of the developing brain, especially in the retina and tectum. They are part of a system controlling retinotectal mapping. Length = 267

>gnl|CDD|133192 cd05061, PTKc_InsR, Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

 Score = 59.6 bits (144), Expect = 3e-11
 Identities = 42/148 (28%), Positives = 75/148 (50%), Gaps = 16/148 (10%)

Query: 11  YLNSKKSKTSNAFLFCCQIDEDLTARI-------NMADAQFSFQQRGRCYYPA-WMSPEA 62
           YLN+KK    +     C +  D T +I       ++ +  + +++ G+   P  WM+PE+
Sbjct: 134 YLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDY-YRKGGKGLLPVRWMAPES 192

Query: 63  LQKKPGDRNLEA-CDMWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGIS 120
           L+    D       DMWSF V+LWE+ +  E P+  L+  +V +K  ++G  +  P    
Sbjct: 193 LK----DGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQV-LKFVMDGGYLDQPDNCP 247

Query: 121 SHLSKLIRICMNEDPGKRPTFDMVLPIL 148
             ++ L+R+C   +P  RPTF  ++ +L
Sbjct: 248 ERVTDLMRMCWQFNPKMRPTFLEIVNLL 275

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein metabolism, ion and amino acid transport, cell cycle and proliferation, cell differentiation, gene transcription, and nitric oxide synthesis. Insulin resistance, caused by abnormalities in InsR signaling, has been described in diabetes, hypertension, cardiovascular disease, metabolic syndrome, heart failure, and female infertility. Length = 288

>gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

 Score = 59.0 bits (143), Expect = 3e-11
 Identities = 28/91 (30%), Positives = 43/91 (47%), Gaps = 2/91 (2%)

Query: 55  PAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRIT 114
           P WM+PE + ++ G   L A D+WS    + E+AT + P++ L  +    K+        
Sbjct: 165 PYWMAPEVIAQQ-GGYGLAA-DIWSLGCTVLEMATGKPPWSQLEGVAAVFKIGRSKELPP 222

Query: 115 IPPGISSHLSKLIRICMNEDPGKRPTFDMVL 145
           IP  +S      I  C+  DP  RPT   +L
Sbjct: 223 IPDHLSDEAKDFILKCLQRDPSLRPTAAELL 253

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258

>gnl|CDD|132956 cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 58.7 bits (142), Expect = 4e-11
 Identities = 25/91 (27%), Positives = 42/91 (46%), Gaps = 3/91 (3%)

Query: 55  PAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRIT 114
           P WMSPE +    G+      D+WS    + E+ T + P+A+   M    K+A +     
Sbjct: 171 PYWMSPEVIS---GEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQPTNPQ 227

Query: 115 IPPGISSHLSKLIRICMNEDPGKRPTFDMVL 145
           +P  +S      +R    E+  KRP+ + +L
Sbjct: 228 LPSHVSPDARNFLRRTFVENAKKRPSAEELL 258

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 263

>gnl|CDD|133230 cd05099, PTKc_FGFR4, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

 Score = 59.2 bits (143), Expect = 4e-11
 Identities = 35/96 (36%), Positives = 50/96 (52%), Gaps = 5/96 (5%)

Query: 57  WMSPEALQKKPGDR-NLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITI 115
           WM+PEAL     DR      D+WSF +L+WE+ T         P+E   K+  EG R+  
Sbjct: 202 WMAPEAL----FDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVEELFKLLREGHRMDK 257

Query: 116 PPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKM 151
           P   +  L  L+R C +  P +RPTF  ++  LDK+
Sbjct: 258 PSNCTHELYMLMRECWHAVPTQRPTFKQLVEALDKV 293

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Unlike other FGFRs, there is only one splice form of FGFR4. It binds FGF1, FGF2, FGF6, FGF19, and FGF23. FGF19 is a selective ligand for FGFR4. Although disruption of FGFR4 in mice causes no obvious phenotype, in vivo inhibition of FGFR4 in cultured skeletal muscle cells resulted in an arrest of muscle progenitor differentiation. FGF6 and FGFR4 are uniquely expressed in myofibers and satellite cells. FGF6/FGFR4 signaling appears to play a key role in the regulation of muscle regeneration. A polymorphism in FGFR4 is found in head and neck squamous cell carcinoma. Length = 314

>gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

 Score = 58.4 bits (142), Expect = 7e-11
 Identities = 24/92 (26%), Positives = 44/92 (47%), Gaps = 4/92 (4%)

Query: 55  PAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGL-RI 113
           P WM+PE +++K         D+WS  ++  E+A  E P+    P+     +  +G+  +
Sbjct: 180 PYWMAPEVIKRKDYG---PKVDIWSLGIMCIEMAEGEPPYLREPPLRALFLITTKGIPPL 236

Query: 114 TIPPGISSHLSKLIRICMNEDPGKRPTFDMVL 145
             P   S      +  C+ +DP KRP+ + +L
Sbjct: 237 KNPEKWSPEFKDFLNKCLVKDPEKRPSAEELL 268

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286

>gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

 Score = 58.0 bits (141), Expect = 8e-11
 Identities = 28/86 (32%), Positives = 40/86 (46%), Gaps = 4/86 (4%)

Query: 55  PAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRIT 114
           P WM+PE ++         A D+WS    + EL T   P+ DL PM    ++  +     
Sbjct: 163 PYWMAPEVIEMSGAS---TASDIWSLGCTVIELLTGNPPYYDLNPMAALFRIV-QDDHPP 218

Query: 115 IPPGISSHLSKLIRICMNEDPGKRPT 140
           +P GIS  L   +  C  +DP  RPT
Sbjct: 219 LPEGISPELKDFLMQCFQKDPNLRPT 244

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254

>gnl|CDD|173625 cd05032, PTKc_InsR_like, Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

 Score = 57.7 bits (140), Expect = 9e-11
 Identities = 49/155 (31%), Positives = 77/155 (49%), Gaps = 28/155 (18%)

Query: 11  YLNSKKSKTSNAFLFC--------CQIDEDLTARI---NMADAQFS---FQQRGRCYYPA 56
           YL +KK        F         C + EDLT +I    M    +    +++ G+   P 
Sbjct: 134 YLAAKK--------FVHRDLAARNCMVAEDLTVKIGDFGMTRDIYETDYYRKGGKGLLPV 185

Query: 57  -WMSPEALQKKPGDRNLEACDMWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRIT 114
            WM+PE+L  K G    ++ D+WSF V+LWE+AT  E P+  L+  EV +K  ++G  + 
Sbjct: 186 RWMAPESL--KDGVFTTKS-DVWSFGVVLWEMATLAEQPYQGLSNEEV-LKFVIDGGHLD 241

Query: 115 IPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILD 149
           +P      L +L+R+C   +P  RPTF  ++  L 
Sbjct: 242 LPENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLK 276

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR and IGF-1R, which share 84% sequence identity in their kinase domains, display physiologically distinct yet overlapping functions in cell growth, differentiation, and metabolism. InsR activation leads primarily to metabolic effects while IGF-1R activation stimulates mitogenic pathways. In cells expressing both receptors, InsR/IGF-1R hybrids are found together with classical receptors. Both receptors can interact with common adaptor molecules such as IRS-1 and IRS-2. Length = 277

>gnl|CDD|133229 cd05098, PTKc_FGFR1, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

 Score = 57.7 bits (139), Expect = 1e-10
 Identities = 35/96 (36%), Positives = 51/96 (53%), Gaps = 5/96 (5%)

Query: 57  WMSPEALQKKPGDR-NLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITI 115
           WM+PEAL     DR      D+WSF VLLWE+ T         P+E   K+  EG R+  
Sbjct: 208 WMAPEAL----FDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDK 263

Query: 116 PPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKM 151
           P   ++ L  ++R C +  P +RPTF  ++  LD++
Sbjct: 264 PSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 299

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Alternative splicing of FGFR1 transcripts produces a variety of isoforms, which are differentially expressed in cells. FGFR1 binds the ligands, FGF1 and FGF2, with high affinity and has also been reported to bind FGF4, FGF6, and FGF9. FGFR1 signaling is critical in the control of cell migration during embryo development. It promotes cell proliferation in fibroblasts. Nuclear FGFR1 plays a role in the regulation of transcription. Mutations, insertions or deletions of FGFR1 have been identified in patients with Kallman's syndrome (KS), an inherited disorder characterized by hypogonadotropic hypogonadism and loss of olfaction. Aberrant FGFR1 expression has been found in some human cancers including 8P11 myeloproliferative syndrome (EMS), breast cancer, and pancreatic adenocarcinoma. Length = 307

>gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

 Score = 57.0 bits (138), Expect = 1e-10
 Identities = 39/122 (31%), Positives = 63/122 (51%), Gaps = 11/122 (9%)

Query: 29  IDEDLTARIN---MADAQFSFQQRGRCYYPA-WMSPEALQKKPGDRNLEACDMWSFAVLL 84
           + EDL A+++   +A      Q  G+   P  W +PEAL++K   +     D+WSF +LL
Sbjct: 135 VSEDLVAKVSDFGLAKEASQGQDSGK--LPVKWTAPEALREK---KFSTKSDVWSFGILL 189

Query: 85  WEL-ATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDM 143
           WE+ +   VP+  +   +V   V  +G R+  P G    + K+++ C   DP KRPTF  
Sbjct: 190 WEIYSFGRVPYPRIPLKDVVPHVE-KGYRMEAPEGCPPEVYKVMKDCWELDPAKRPTFKQ 248

Query: 144 VL 145
           + 
Sbjct: 249 LR 250

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256

>gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases

 Score = 57.1 bits (138), Expect = 2e-10
 Identities = 39/159 (24%), Positives = 63/159 (39%), Gaps = 34/159 (21%)

Query: 11  YLNSKKSKTSNAFLFCCQIDEDLTAR---------INMADAQFSFQQRGRCYYPA----- 56
           YL SK           C I  DL AR         + ++D   S ++ G  Y  +     
Sbjct: 108 YLESK----------NC-IHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDGLKQ 156

Query: 57  ----WMSPEALQKKPGDRNLEACDMWSFAVLLWELATR-EVPFADLTPMEVGMKVALEGL 111
               W +PEAL      R     D+WS+ +LLWE  +  + P+  ++  +   ++   G 
Sbjct: 157 IPIKWTAPEALNY---GRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTRERIE-SGY 212

Query: 112 RITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDK 150
           R+  P      + +L+  C   DP  RP+F  +   L  
Sbjct: 213 RMPAPQLCPEEIYRLMLQCWAYDPENRPSFSEIYNELQI 251

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251

>gnl|CDD|133189 cd05058, PTKc_Met_Ron, Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

 Score = 57.1 bits (138), Expect = 2e-10
 Identities = 42/141 (29%), Positives = 67/141 (47%), Gaps = 14/141 (9%)

Query: 11  YLNSKKSKTSNAFLFCCQIDEDLTARI-------NMADAQF-SFQQRGRCYYPA-WMSPE 61
           YL SKK    +     C +DE  T ++       ++ D ++ S         P  WM+ E
Sbjct: 113 YLASKKFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYSVHNHTGAKLPVKWMALE 172

Query: 62  ALQKKPGDRNLEACDMWSFAVLLWELATREV-PFADLTPMEVGMKVALEGLRITIPPGIS 120
           +LQ +   +     D+WSF VLLWEL TR   P+ D+   ++ + + L+G R+  P    
Sbjct: 173 SLQTQ---KFTTKSDVWSFGVLLWELMTRGAPPYPDVDSFDITVYL-LQGRRLLQPEYCP 228

Query: 121 SHLSKLIRICMNEDPGKRPTF 141
             L +++  C +  P  RPTF
Sbjct: 229 DPLYEVMLSCWHPKPEMRPTF 249

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also called the HGF receptor. HGF/Met signaling plays a role in growth, transformation, cell motility, invasion, metastasis, angiogenesis, wound healing, and tissue regeneration. Aberrant expression of Met through mutations or gene amplification is associated with many human cancers including hereditary papillary renal and gastric carcinomas. The ligand for Ron is macrophage stimulating protein (MSP). Ron signaling is important in regulating cell motility, adhesion, proliferation, and apoptosis. Aberrant Ron expression is implicated in tumorigenesis and metastasis. Length = 262

>gnl|CDD|132940 cd06609, STKc_MST3_like, Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

 Score = 56.9 bits (138), Expect = 2e-10
 Identities = 30/92 (32%), Positives = 45/92 (48%), Gaps = 15/92 (16%)

Query: 55  PAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKV------AL 108
           P WM+PE +++   D   E  D+WS  +   ELA  E P +DL PM V   +      +L
Sbjct: 162 PFWMAPEVIKQSGYD---EKADIWSLGITAIELAKGEPPLSDLHPMRVLFLIPKNNPPSL 218

Query: 109 EGLRITIPPGISSHLSKLIRICMNEDPGKRPT 140
           EG         S      + +C+N+DP +RP+
Sbjct: 219 EG------NKFSKPFKDFVSLCLNKDPKERPS 244

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) signaling pathway, and plays a role in cytokinesis. SPS1 plays a role in regulating proteins required for spore wall formation. MST4 plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. STK25 may play a role in the regulation of cell migration and polarization. Length = 274

>gnl|CDD|133200 cd05069, PTKc_Yes, Catalytic domain of the Protein Tyrosine Kinase, Yes

 Score = 56.2 bits (135), Expect = 3e-10
 Identities = 40/124 (32%), Positives = 66/124 (53%), Gaps = 7/124 (5%)

Query: 27  CQIDEDLTARINMADAQFSFQQRGRCYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWE 86
           C+I +   AR+ + D +++ +Q G  +   W +PEA       R     D+WSF +LL E
Sbjct: 141 CKIADFGLARL-IEDNEYTARQ-GAKFPIKWTAPEAALY---GRFTIKSDVWSFGILLTE 195

Query: 87  LATR-EVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVL 145
           L T+  VP+  +   EV  +V   G R+  P G    L +L+++C  +DP +RPTF+ + 
Sbjct: 196 LVTKGRVPYPGMVNREVLEQVE-RGYRMPCPQGCPESLHELMKLCWKKDPDERPTFEYIQ 254

Query: 146 PILD 149
             L+
Sbjct: 255 SFLE 258

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. c-Yes kinase is the cellular homolog of the oncogenic protein (v-Yes) encoded by the Yamaguchi 73 and Esh sarcoma viruses. It displays functional overlap with other Src subfamily members, particularly Src. It also shows some unique functions such as binding to occludins, transmembrane proteins that regulate extracellular interactions in tight junctions. Yes also associates with a number of proteins in different cell types that Src does not interact with, like JAK2 and gp130 in pre-adipocytes, and Pyk2 in treated pulmonary vein endothelial cells. Although the biological function of Yes remains unclear, it appears to have a role in regulating cell-cell interactions and vesicle trafficking in polarized cells. Length = 260

>gnl|CDD|173671 cd05580, STKc_PKA, Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

 Score = 56.4 bits (137), Expect = 3e-10
 Identities = 33/108 (30%), Positives = 52/108 (48%), Gaps = 13/108 (12%)

Query: 37  INMADAQFSFQQR--GRCYY----PAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATR 90
           I + D  F F +R  GR Y     P +++PE +  K   +   A D W+  +L++E+   
Sbjct: 140 IKITD--FGFAKRVKGRTYTLCGTPEYLAPEIILSKGYGK---AVDWWALGILIYEMLAG 194

Query: 91  EVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKR 138
             PF D  P+++  K+ LEG ++  P   S     LIR  +  D  KR
Sbjct: 195 YPPFFDDNPIQIYEKI-LEG-KVRFPSFFSPDAKDLIRNLLQVDLTKR 240

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubiquitously in cells and interacts with many different downstream targets. It plays a role in the regulation of diverse processes such as growth, development, memory, metabolism, gene expression, immunity, and lipolysis. Length = 290

>gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases

 Score = 56.0 bits (136), Expect = 4e-10
 Identities = 33/124 (26%), Positives = 51/124 (41%), Gaps = 16/124 (12%)

Query: 29  IDED----LT----ARINMADAQFSFQQRGRCYYPAWMSPEALQKKPGDRNLEACDMWSF 80
           +D D    LT    A+   ++   +    G   Y   ++PE L  K   +   A D WS 
Sbjct: 126 LDADGHIKLTDFGLAKELSSEGSRTNTFCGTPEY---LAPEVLLGKGYGK---AVDWWSL 179

Query: 81  AVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPT 140
            VLL+E+ T + PF      E+  K+ L+   +  P  +S     LI   + +DP KR  
Sbjct: 180 GVLLYEMLTGKPPFYAEDRKEIYEKI-LKD-PLRFPEFLSPEARDLISGLLQKDPTKRLG 237

Query: 141 FDMV 144
               
Sbjct: 238 SGGA 241

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250

>gnl|CDD|133172 cd05040, PTKc_Ack_like, Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

 Score = 55.5 bits (134), Expect = 6e-10
 Identities = 29/87 (33%), Positives = 45/87 (51%), Gaps = 4/87 (4%)

Query: 56  AWMSPEALQKKPGDRNLEACDMWSFAVLLWELATR-EVPFADLTPMEVGMKVALEGLRIT 114
           AW +PE+L+ +       A D+W F V LWE+ T  E P+A L+  ++  K+  EG R+ 
Sbjct: 165 AWCAPESLRTR---TFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQILKKIDKEGERLE 221

Query: 115 IPPGISSHLSKLIRICMNEDPGKRPTF 141
            P      +  ++  C   +P  RPTF
Sbjct: 222 RPEACPQDIYNVMLQCWAHNPADRPTF 248

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. Length = 257

>gnl|CDD|133187 cd05056, PTKc_FAK, Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

 Score = 55.1 bits (133), Expect = 8e-10
 Identities = 32/99 (32%), Positives = 46/99 (46%), Gaps = 13/99 (13%)

Query: 53  YYPA--------WMSPEALQKKPGDRNLEACDMWSFAVLLWELATREV-PFADLTPMEVG 103
           YY A        WM+PE++  +   R   A D+W F V +WE+    V PF  +   +V 
Sbjct: 162 YYKASKGKLPIKWMAPESINFR---RFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVI 218

Query: 104 MKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFD 142
            ++   G R+ +PP     L  L+  C   DP KRP F 
Sbjct: 219 GRIE-NGERLPMPPNCPPTLYSLMTKCWAYDPSKRPRFT 256

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions and at growth factor receptors. Through diverse molecular interactions, FAK functions as a biosensor or integrator to control cell motility. It is a key regulator of cell survival, proliferation, migration and invasion, and thus plays an important role in the development and progression of cancer. Src binds to autophosphorylated FAK forming the FAK-Src dual kinase complex, which is activated in a wide variety of tumor cells and generates signals promoting growth and metastasis. FAK is being developed as a target for cancer therapy. Length = 270

>gnl|CDD|173652 cd05100, PTKc_FGFR3, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

 Score = 55.4 bits (133), Expect = 1e-09
 Identities = 36/97 (37%), Positives = 53/97 (54%), Gaps = 7/97 (7%)

Query: 57  WMSPEALQKKPGDR-NLEACDMWSFAVLLWELATR-EVPFADLTPMEVGMKVALEGLRIT 114
           WM+PEAL     DR      D+WSF VLLWE+ T    P+  + P+E   K+  EG R+ 
Sbjct: 202 WMAPEAL----FDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGI-PVEELFKLLKEGHRMD 256

Query: 115 IPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKM 151
            P   +  L  ++R C +  P +RPTF  ++  LD++
Sbjct: 257 KPANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRV 293

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Many FGFR3 splice variants have been reported with the IIIb and IIIc isoforms being the predominant forms. FGFR3 IIIc is the isoform expressed in chondrocytes, the cells affected in dwarfism, while IIIb is expressed in epithelial cells. FGFR3 ligands include FGF1, FGF2, FGF4, FGF8, FGF9, and FGF23. It is a negative regulator of long bone growth. In the cochlear duct and in the lens, FGFR3 is involved in differentiation while it appears to have a role in cell proliferation in epithelial cells. Germline mutations in FGFR3 are associated with skeletal disorders including several forms of dwarfism. Some missense mutations are associated with multiple myeloma and carcinomas of the bladder and cervix. Overexpression of FGFR3 is found in thyroid carcinoma. Length = 334

>gnl|CDD|133232 cd05101, PTKc_FGFR2, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

 Score = 55.0 bits (132), Expect = 1e-09
 Identities = 35/97 (36%), Positives = 53/97 (54%), Gaps = 7/97 (7%)

Query: 57  WMSPEALQKKPGDR-NLEACDMWSFAVLLWELATRE-VPFADLTPMEVGMKVALEGLRIT 114
           WM+PEAL     DR      D+WSF VL+WE+ T    P+  + P+E   K+  EG R+ 
Sbjct: 205 WMAPEAL----FDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGI-PVEELFKLLKEGHRMD 259

Query: 115 IPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKM 151
            P   ++ L  ++R C +  P  RPTF  ++  LD++
Sbjct: 260 KPANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRI 296

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. There are many splice variants of FGFR2 which show differential expression and binding to FGF ligands. Disruption of either FGFR2 or FGFR2b is lethal in mice, due to defects in the placenta or severe impairment of tissue development including lung, limb, and thyroid, respectively. Disruption of FGFR2c in mice results in defective bone and skull development. Genetic alterations of FGFR2 are associated with many human skeletal disorders including Apert syndrome, Crouzon syndrome, Jackson-Weiss syndrome, and Pfeiffer syndrome. Length = 304

>gnl|CDD|173645 cd05084, PTKc_Fes, Catalytic domain of the Protein Tyrosine Kinase, Fes

 Score = 54.2 bits (130), Expect = 2e-09
 Identities = 31/93 (33%), Positives = 48/93 (51%), Gaps = 5/93 (5%)

Query: 57  WMSPEALQKKPGDRNLEACDMWSFAVLLWE-LATREVPFADLTPMEVGMKVALEGLRITI 115
           W +PEAL      R     D+WSF +LLWE  +   VP+A+L+  +    +  +G+R+  
Sbjct: 162 WTAPEALNY---GRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQTREAIE-QGVRLPC 217

Query: 116 PPGISSHLSKLIRICMNEDPGKRPTFDMVLPIL 148
           P      + +L+  C   DPG+RP+F  V   L
Sbjct: 218 PELCPDAVYRLMERCWEYDPGQRPSFSTVHQEL 250

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular endothelial, epithelial, and neuronal cells. It plays important roles in cell growth and differentiation, angiogenesis, inflammation and immunity, and cytoskeletal regulation. A recent study implicates Fes kinase as a tumor suppressor in colorectal cancer. Length = 252

>gnl|CDD|173641 cd05072, PTKc_Lyn, Catalytic domain of the Protein Tyrosine Kinase, Lyn

 Score = 53.9 bits (129), Expect = 2e-09
 Identities = 34/127 (26%), Positives = 66/127 (51%), Gaps = 7/127 (5%)

Query: 24  LFCCQIDEDLTARINMADAQFSFQQRGRCYYPAWMSPEALQKKPGDRNLEACDMWSFAVL 83
              C+I +   AR+ + D +++ ++ G  +   W +PEA+    G   +++ D+WSF +L
Sbjct: 139 SLMCKIADFGLARV-IEDNEYTARE-GAKFPIKWTAPEAINF--GSFTIKS-DVWSFGIL 193

Query: 84  LWELATR-EVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFD 142
           L+E+ T  ++P+  ++  +V M     G R+         L  +++ C  E   +RPTFD
Sbjct: 194 LYEIVTYGKIPYPGMSNSDV-MSALQRGYRMPRMENCPDELYDIMKTCWKEKAEERPTFD 252

Query: 143 MVLPILD 149
            +  +LD
Sbjct: 253 YLQSVLD 259

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lyn is expressed in B lymphocytes and myeloid cells. It exhibits both positive and negative regulatory roles in B cell receptor (BCR) signaling. Lyn, as well as Fyn and Blk, promotes B cell activation by phosphorylating ITAMs (immunoreceptor tyr activation motifs) in CD19 and in Ig components of BCR. It negatively regulates signaling by its unique ability to phosphorylate ITIMs (immunoreceptor tyr inhibition motifs) in cell surface receptors like CD22 and CD5. Lyn also plays an important role in G-CSF receptor signaling by phosphorylating a variety of adaptor molecules. Length = 261

>gnl|CDD|133214 cd05083, PTKc_Chk, Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

 Score = 53.4 bits (128), Expect = 3e-09
 Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 5/86 (5%)

Query: 57  WMSPEALQKKPGDRNLEACDMWSFAVLLWELATR-EVPFADLTPMEVGMKVALEGLRITI 115
           W +PEAL+ K   +     D+WS+ VLLWE+ +    P+  ++  EV   V  +G R+  
Sbjct: 163 WTAPEALKHK---KFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEVKECVE-KGYRMEP 218

Query: 116 PPGISSHLSKLIRICMNEDPGKRPTF 141
           P G  + +  L+  C   +P KRP+F
Sbjct: 219 PEGCPADVYVLMTSCWETEPKKRPSF 244

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As a negative regulator of Src kinases, Chk may play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Chk is expressed in brain and hematopoietic cells. Studies in mice reveal that Chk is not functionally redundant with Csk and that it plays an important role as a regulator of immune responses. Chk also plays a role in neural differentiation in a manner independent of Src by enhancing Mapk activation via Ras-mediated signaling. Length = 254

>gnl|CDD|133199 cd05068, PTKc_Frk_like, Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

 Score = 53.2 bits (128), Expect = 4e-09
 Identities = 32/87 (36%), Positives = 46/87 (52%), Gaps = 5/87 (5%)

Query: 57  WMSPEALQKKPGDRNLEACDMWSFAVLLWELATR-EVPFADLTPMEVGMKVALEGLRITI 115
           W +PEA      +R     D+WSF +LL E+ T   +P+  +T  EV  +V  +G R+  
Sbjct: 170 WTAPEAALY---NRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAEVLQQVD-QGYRMPC 225

Query: 116 PPGISSHLSKLIRICMNEDPGKRPTFD 142
           PPG    L  ++  C  EDP  RPTF+
Sbjct: 226 PPGCPKELYDIMLDCWKEDPDDRPTFE 252

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Frk, also known as Rak, is specifically expressed in liver, lung, kidney, intestine, mammary glands, and the islets of Langerhans. Rodent homologs were previously referred to as GTK (gastrointestinal tyr kinase), BSK (beta-cell Src-like kinase), or IYK (intestinal tyr kinase). Studies in mice reveal that Frk is not essential for viability. It plays a role in the signaling that leads to cytokine-induced beta-cell death in Type I diabetes. It also regulates beta-cell number during embryogenesis and early in life. Length = 261

>gnl|CDD|173631 cd05045, PTKc_RET, Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

 Score = 53.4 bits (128), Expect = 4e-09
 Identities = 34/109 (31%), Positives = 52/109 (47%), Gaps = 6/109 (5%)

Query: 45  SFQQRGRCYYPA-WMSPEALQKKPGDRNLEACDMWSFAVLLWELATREV-PFADLTPMEV 102
           S+ +R +   P  WM+ E+L            D+WSF VLLWE+ T    P+  + P  +
Sbjct: 182 SYVKRSKGRIPVKWMAIESLFDHI---YTTQSDVWSFGVLLWEIVTLGGNPYPGIAPERL 238

Query: 103 GMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKM 151
              +   G R+  P   S  +  L+  C  ++P KRPTF  +   L+KM
Sbjct: 239 -FNLLKTGYRMERPENCSEEMYNLMLTCWKQEPDKRPTFADISKELEKM 286

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leading to autophosphorylation, activation, and intracellular signaling. RET is essential for the development of the sympathetic, parasympathetic and enteric nervous systems, and the kidney. RET disruption by germline mutations causes diseases in humans including congenital aganglionosis of the gastrointestinal tract (Hirschsprung's disease) and three related inherited cancers: multiple endocrine neoplasia type 2A (MEN2A), MEN2B, and familial medullary thyroid carcinoma (FMTC). Length = 290

>gnl|CDD|133168 cd05036, PTKc_ALK_LTK, Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

 Score = 53.2 bits (128), Expect = 5e-09
 Identities = 33/106 (31%), Positives = 47/106 (44%), Gaps = 16/106 (15%)

Query: 50  GRCYYP-AWMSPEALQKKPGDRNLEA-----CDMWSFAVLLWEL-ATREVPFADLTPMEV 102
           GR   P  WM PEA         L+       D+WSF VLLWE+ +   +P+   T  EV
Sbjct: 179 GRAMLPIKWMPPEAF--------LDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQEV 230

Query: 103 GMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPIL 148
            M+    G R+  P G    + +++  C    P  RP F  +L  +
Sbjct: 231 -MEFVTGGGRLDPPKGCPGPVYRIMTDCWQHTPEDRPNFATILERI 275

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well as visceral muscle differentiation in Drosophila. ALK is aberrantly expressed as fusion proteins, due to chromosomal translocations, in about 60% of anaplastic large cell lymphomas (ALCLs). ALK fusion proteins are also found in rare cases of diffuse large B cell lymphomas (DLBCLs). LTK is mainly expressed in B lymphocytes and neuronal tissues. It is important in cell proliferation and survival. Transgenic mice expressing TLK display retarded growth and high mortality rate. In addition, a polymorphism in mouse and human LTK is implicated in the pathogenesis of systemic lupus erythematosus. Length = 277

>gnl|CDD|133213 cd05082, PTKc_Csk, Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

 Score = 53.1 bits (127), Expect = 5e-09
 Identities = 26/89 (29%), Positives = 48/89 (53%), Gaps = 5/89 (5%)

Query: 57  WMSPEALQKKPGDRNLEACDMWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITI 115
           W +PEAL++K   +     D+WSF +LLWE+ +   VP+  +   +V  +V  +G ++  
Sbjct: 165 WTAPEALREK---KFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVE-KGYKMDA 220

Query: 116 PPGISSHLSKLIRICMNEDPGKRPTFDMV 144
           P G    +  +++ C + D   RP+F  +
Sbjct: 221 PDGCPPVVYDVMKQCWHLDAATRPSFLQL 249

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Csk is expressed in a wide variety of tissues. As a negative regulator of Src, Csk plays a role in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. In addition, Csk also shows Src-independent functions. It is a critical component in G-protein signaling, and plays a role in cytoskeletal reorganization and cell migration. Length = 256

>gnl|CDD|140293 PTZ00267, PTZ00267, NIMA-related protein kinase; Provisional

 Score = 53.5 bits (128), Expect = 5e-09
 Identities = 42/148 (28%), Positives = 67/148 (45%), Gaps = 20/148 (13%)

Query: 7   VYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQRGR---------CYYPAW 57
           V+S  +  +  K++N FL         T  I + D  FS Q             C  P +
Sbjct: 185 VHSRKMMHRDLKSANIFLMP-------TGIIKLGDFGFSKQYSDSVSLDVASSFCGTPYY 237

Query: 58  MSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPP 117
           ++PE  ++K   R  +  DMWS  V+L+EL T   PF   +  E+ M+  L G     P 
Sbjct: 238 LAPELWERK---RYSKKADMWSLGVILYELLTLHRPFKGPSQREI-MQQVLYGKYDPFPC 293

Query: 118 GISSHLSKLIRICMNEDPGKRPTFDMVL 145
            +SS +  L+   ++++P  RPT   +L
Sbjct: 294 PVSSGMKALLDPLLSKNPALRPTTQQLL 321

Length = 478

>gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

 Score = 52.5 bits (126), Expect = 6e-09
 Identities = 38/142 (26%), Positives = 64/142 (45%), Gaps = 25/142 (17%)

Query: 11  YLNSKK-----SKTSNAFLFCCQIDEDLT--------ARINMADAQFSFQQRGRCYYPAW 57
           +L+SKK      K+ N FL     D            A++   +  F+    G  YY   
Sbjct: 116 HLHSKKILHRDIKSLNLFL-----DAYDNVKIGDLGVAKLLSDNTNFANTIVGTPYY--- 167

Query: 58  MSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPP 117
           +SPE  + KP +   E  D+W+  V+L+E  T + PF       + +K+ + G+   +  
Sbjct: 168 LSPELCEDKPYN---EKSDVWALGVVLYECCTGKHPFDANNQGALILKI-IRGVFPPVSQ 223

Query: 118 GISSHLSKLIRICMNEDPGKRP 139
             S  L++LI  C+ +D  +RP
Sbjct: 224 MYSQQLAQLIDQCLTKDYRQRP 245

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256

>gnl|CDD|132973 cd06642, STKc_STK25-YSK1, Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

 Score = 52.7 bits (126), Expect = 7e-09
 Identities = 30/90 (33%), Positives = 42/90 (46%), Gaps = 12/90 (13%)

Query: 55  PAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRIT 114
           P WM+PE +++   D      D+WS  +   ELA  E P +DL PM V   +        
Sbjct: 165 PFWMAPEVIKQSAYDFK---ADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPKNS---- 217

Query: 115 IPPGISSHLSK----LIRICMNEDPGKRPT 140
            PP +    SK     +  C+N+DP  RPT
Sbjct: 218 -PPTLEGQYSKPFKEFVEACLNKDPRFRPT 246

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 is a candidate gene responsible for pseudopseudohypoparathyroidism (PPHP), a disease that shares features with the Albright hereditary osteodystrophy (AHO) phenotype. Length = 277

>gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases

 Score = 52.3 bits (126), Expect = 7e-09
 Identities = 33/100 (33%), Positives = 48/100 (48%), Gaps = 17/100 (17%)

Query: 57  WMSPEAL------QKKPGDRNLEACDMWSFAVLLWELATR-EVPFADLTPMEVGMKVALE 109
           W +PEA        K          D+WSF +LL E+ T   VP+  +T  EV  +V   
Sbjct: 170 WTAPEAANYGRFTIKS---------DVWSFGILLTEIVTYGRVPYPGMTNREVLEQVER- 219

Query: 110 GLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILD 149
           G R+  PP     L  L+  C ++DP +RPTF+ +   L+
Sbjct: 220 GYRMPRPPNCPEELYDLMLQCWDKDPEERPTFEYLQSFLE 259

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261

>gnl|CDD|240344 PTZ00283, PTZ00283, serine/threonine protein kinase; Provisional

 Score = 52.9 bits (127), Expect = 8e-09
 Identities = 31/89 (34%), Positives = 49/89 (55%), Gaps = 4/89 (4%)

Query: 52  CYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGL 111
           C  P +++PE  ++KP  +     DM+S  VLL+EL T + PF D   ME  M   L G 
Sbjct: 206 CGTPYYVAPEIWRRKPYSKK---ADMFSLGVLLYELLTLKRPF-DGENMEEVMHKTLAGR 261

Query: 112 RITIPPGISSHLSKLIRICMNEDPGKRPT 140
              +PP IS  + +++   ++ DP +RP+
Sbjct: 262 YDPLPPSISPEMQEIVTALLSSDPKRRPS 290

Length = 496

>gnl|CDD|133219 cd05088, PTKc_Tie2, Catalytic domain of the Protein Tyrosine Kinase, Tie2

 Score = 52.7 bits (126), Expect = 8e-09
 Identities = 31/96 (32%), Positives = 49/96 (51%), Gaps = 5/96 (5%)

Query: 57  WMSPEALQKKPGDRNLEACDMWSFAVLLWELATRE-VPFADLTPMEVGMKVALEGLRITI 115
           WM+ E+L       N    D+WS+ VLLWE+ +    P+  +T  E+  K+   G R+  
Sbjct: 189 WMAIESLNYSVYTTN---SDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQ-GYRLEK 244

Query: 116 PPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKM 151
           P      +  L+R C  E P +RP+F  +L  L++M
Sbjct: 245 PLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRM 280

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. Tie2 signaling plays key regulatory roles in vascular integrity and quiescence, and in inflammation. Length = 303

>gnl|CDD|173640 cd05067, PTKc_Lck_Blk, Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

 Score = 52.2 bits (125), Expect = 8e-09
 Identities = 38/125 (30%), Positives = 70/125 (56%), Gaps = 7/125 (5%)

Query: 26  CCQIDEDLTARINMADAQFSFQQRGRCYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLW 85
           CC+I +   AR+ + D +++ ++ G  +   W +PEA+    G   +++ D+WSF +LL 
Sbjct: 140 CCKIADFGLARL-IEDNEYTARE-GAKFPIKWTAPEAINY--GTFTIKS-DVWSFGILLT 194

Query: 86  ELATR-EVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMV 144
           E+ T   +P+  +T  EV ++    G R+  P      L +L+R+C  E P +RPTF+ +
Sbjct: 195 EIVTYGRIPYPGMTNPEV-IQNLERGYRMPRPDNCPEELYELMRLCWKEKPEERPTFEYL 253

Query: 145 LPILD 149
             +L+
Sbjct: 254 RSVLE 258

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lck is expressed in T-cells and natural killer (NK) cells. It plays a critical role in T-cell maturation, activation, and T-cell receptor (TCR) signaling. Lck phosphorylates ITAM (immunoreceptor tyr activation motif) sequences on several subunits of TCRs, leading to the activation of different second messenger cascades. Phosphorylated ITAMs serve as binding sites for other signaling factor such as Syk and ZAP-70, leading to their activation and propagation of downstream events. In addition, Lck regulates drug-induced apoptosis by interfering with the mitochondrial death pathway. The apototic role of Lck is independent of its primary function in T-cell signaling. Blk is expressed specifically in B-cells. It is involved in pre-BCR (B-cell receptor) signaling. Length = 260

>gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

 Score = 52.2 bits (126), Expect = 9e-09
 Identities = 33/112 (29%), Positives = 49/112 (43%), Gaps = 13/112 (11%)

Query: 38  NMADAQFSFQQRGRCYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADL 97
           N  D   +F   G   Y   MSPE +Q   G+    A D+WS  + L E A  + PF   
Sbjct: 152 NTLDQCNTFV--GTVTY---MSPERIQ---GESYSYAADIWSLGLTLLECALGKFPFLPP 203

Query: 98  ---TPMEVGMKVALEGLRITIPPG-ISSHLSKLIRICMNEDPGKRPTFDMVL 145
              +  E+ M+   +G   ++P    S      I  C+ +DP KRP+   +L
Sbjct: 204 GQPSFFEL-MQAICDGPPPSLPAEEFSPEFRDFISACLQKDPKKRPSAAELL 254

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264

>gnl|CDD|173632 cd05051, PTKc_DDR, Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

 Score = 52.0 bits (125), Expect = 1e-08
 Identities = 32/106 (30%), Positives = 50/106 (47%), Gaps = 12/106 (11%)

Query: 46  FQQRGRCYYPA-WMSPEALQKKPGDRNLEACDMWSFAVLLWELAT--REVPFADLTPMEV 102
           ++ +GR   P  WM+ E++      +     D+W+F V LWE+ T  RE P+  LT  +V
Sbjct: 186 YRVQGRAPLPIRWMAWESVL---LGKFTTKSDVWAFGVTLWEILTLCREQPYEHLTDQQV 242

Query: 103 ----GMKVALEGLRITI--PPGISSHLSKLIRICMNEDPGKRPTFD 142
               G     +G +I +  PP     + +L+  C   D   RPTF 
Sbjct: 243 IENAGHFFRDDGRQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFR 288

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 296

>gnl|CDD|132942 cd06611, STKc_SLK_like, Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

 Score = 52.1 bits (125), Expect = 1e-08
 Identities = 31/92 (33%), Positives = 45/92 (48%), Gaps = 9/92 (9%)

Query: 55  PAWMSPEAL-----QKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVAL- 108
           P WM+PE +     +  P D      D+WS  + L ELA  E P  +L PM V +K+   
Sbjct: 167 PYWMAPEVVACETFKDNPYDYK---ADIWSLGITLIELAQMEPPHHELNPMRVLLKILKS 223

Query: 109 EGLRITIPPGISSHLSKLIRICMNEDPGKRPT 140
           E   +  P   SS  +  ++ C+ +DP  RPT
Sbjct: 224 EPPTLDQPSKWSSSFNDFLKSCLVKDPDDRPT 255

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. SmSLK is capable of activating the MAPK Jun N-terminal kinase (JNK) pathway in human embryonic kidney (HEK) cells as well as in Xenopus oocytes. It may participate in regulating MAPK cascades during host-parasite interactions. Length = 280

>gnl|CDD|132971 cd06640, STKc_MST4, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

 Score = 52.0 bits (124), Expect = 1e-08
 Identities = 31/90 (34%), Positives = 43/90 (47%), Gaps = 12/90 (13%)

Query: 55  PAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRIT 114
           P WM+PE +Q+   D      D+WS  +   ELA  E P +D+ PM V   +        
Sbjct: 165 PFWMAPEVIQQSAYD---SKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPKNN---- 217

Query: 115 IPPGISSHLSK----LIRICMNEDPGKRPT 140
            PP ++   SK     I  C+N+DP  RPT
Sbjct: 218 -PPTLTGEFSKPFKEFIDACLNKDPSFRPT 246

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by interacting with the Golgi matrix protein GM130 and may play a role in cell migration. Length = 277

>gnl|CDD|173638 cd05065, PTKc_EphR_B, Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

 Score = 51.4 bits (123), Expect = 2e-08
 Identities = 27/96 (28%), Positives = 51/96 (53%), Gaps = 5/96 (5%)

Query: 57  WMSPEALQKKPGDRNLEACDMWSFAVLLWELATR-EVPFADLTPMEVGMKVALEGLRITI 115
           W +PEA+  +   +   A D+WS+ +++WE+ +  E P+ D++  +V +    +  R+  
Sbjct: 177 WTAPEAIAYR---KFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDV-INAIEQDYRLPP 232

Query: 116 PPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKM 151
           P    + L +L+  C  +D   RP F  ++  LDKM
Sbjct: 233 PMDCPTALHQLMLDCWQKDRNARPKFGQIVSTLDKM 268

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion. EphBRs play important roles in synapse formation and plasticity, spine morphogenesis, axon guidance, and angiogenesis. In the intestinal epithelium, EphBRs are Wnt signaling target genes that control cell compartmentalization. They function as suppressors of color cancer progression. Length = 269

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score = 51.1 bits (123), Expect = 2e-08
 Identities = 25/91 (27%), Positives = 34/91 (37%), Gaps = 35/91 (38%)

Query: 55  PAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRIT 114
           PA+M+PE L  K      E  D+WS  V+L+EL                           
Sbjct: 157 PAYMAPEVLLGKGYYS--EKSDIWSLGVILYEL--------------------------- 187

Query: 115 IPPGISSHLSKLIRICMNEDPGKRPTFDMVL 145
                   L  LIR  + +DP KRP+   +L
Sbjct: 188 ------PELKDLIRKMLQKDPEKRPSAKEIL 212

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|133181 cd05050, PTKc_Musk, Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

 Score = 51.4 bits (123), Expect = 2e-08
 Identities = 34/134 (25%), Positives = 62/134 (46%), Gaps = 16/134 (11%)

Query: 27  CQIDEDLTARINMADAQFSFQQRGRCYYPA---------WMSPEALQKKPGDRNLEACDM 77
           C + E++   + +AD   S       YY A         WM PE++     +R     D+
Sbjct: 161 CLVGENM--VVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFY---NRYTTESDV 215

Query: 78  WSFAVLLWELATREV-PFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPG 136
           W++ V+LWE+ +  + P+  +   EV +    +G  ++ P      L  L+R+C ++ P 
Sbjct: 216 WAYGVVLWEIFSYGMQPYYGMAHEEV-IYYVRDGNVLSCPDNCPLELYNLMRLCWSKLPS 274

Query: 137 KRPTFDMVLPILDK 150
            RP+F  +  IL +
Sbjct: 275 DRPSFASINRILQR 288

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates Musk autophosphorylation and activation, leading to the clustering of acetylcholine receptors (AChRs). To date, there is no evidence to suggest that agrin binds directly to Musk. Mutations in AChR, Musk and other partners are responsible for diseases of the NMJ, such as the autoimmune syndrome myasthenia gravis. Length = 288

>gnl|CDD|132979 cd06648, STKc_PAK_II, Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

 Score = 51.7 bits (124), Expect = 2e-08
 Identities = 28/124 (22%), Positives = 55/124 (44%), Gaps = 26/124 (20%)

Query: 23  FLFCCQIDEDLTARINMADAQFSFQQRGRCYYPAWMSPEALQKKPGDRNLEACDMWSFAV 82
           F FC Q+ +++  R ++               P WM+PE + + P    +   D+WS  +
Sbjct: 159 FGFCAQVSKEVPRRKSLVGT------------PYWMAPEVISRLPYGTEV---DIWSLGI 203

Query: 83  LLWELATREVPFADLTPMEVGMKVALEGLRITIPP------GISSHLSKLIRICMNEDPG 136
           ++ E+   E P+ +  P++     A++ +R  +PP       +S  L   +   +  DP 
Sbjct: 204 MVIEMVDGEPPYFNEPPLQ-----AMKRIRDNLPPKLKNLHKVSPRLRSFLDRMLVRDPA 258

Query: 137 KRPT 140
           +R T
Sbjct: 259 QRAT 262

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs found in group I PAKs, such as an AID (autoinhibitory domain) and SH3 binding sites. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. While group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX, no such binding has been demonstrated for group II PAKs. Some known substrates of group II PAKs are also substrates of group I PAKs such as Raf, BAD, LIMK and GEFH1. Unique group II substrates include MARK/Par-1 and PDZ-RhoGEF. Group II PAKs play important roles in filopodia formation, neuron extension, cytoskeletal organization, and cell survival. Length = 285

>gnl|CDD|173727 cd06613, STKc_MAP4K3_like, Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

 Score = 51.5 bits (124), Expect = 2e-08
 Identities = 28/92 (30%), Positives = 39/92 (42%), Gaps = 9/92 (9%)

Query: 55  PAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRIT 114
           P WM+PE    +        CD+W+  +   ELA  + P  DL PM     + L      
Sbjct: 165 PYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRA---LFLISKSNF 221

Query: 115 IPPGI------SSHLSKLIRICMNEDPGKRPT 140
            PP +      S      I+ C+ +DP KRPT
Sbjct: 222 PPPKLKDKEKWSPVFHDFIKKCLTKDPKKRPT 253

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K1, also called haematopoietic progenitor kinase 1 (HPK1), is a hematopoietic-specific STK involved in many cellular signaling cascades including MAPK, antigen receptor, apoptosis, growth factor, and cytokine signaling. It participates in the regulation of T cell receptor signaling and T cell-mediated immune responses. MAP4K2 was referred to as germinal center (GC) kinase because of its preferred location in GC B cells. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. It is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). Length = 262

>gnl|CDD|173761 cd08221, STKc_Nek9, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

 Score = 50.9 bits (122), Expect = 2e-08
 Identities = 31/96 (32%), Positives = 49/96 (51%), Gaps = 6/96 (6%)

Query: 55  PAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRIT 114
           P +MSPE  Q    +      D+W+   +L+EL T +  F    P+ + +K+ ++G    
Sbjct: 165 PYYMSPELCQGVKYN---FKSDIWALGCVLYELLTLKRTFDATNPLNLVVKI-VQGNYTP 220

Query: 115 IPPGISSHLSKLIRICMNEDPGKRPTFDMVL--PIL 148
           +    SS L  L+   + +DP KRPT D VL  P+L
Sbjct: 221 VVSVYSSELISLVHSLLQQDPEKRPTADEVLDQPLL 256

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associates with FACT (FAcilitates Chromatin Transcription) and modulates interphase progression. It also interacts with Nek6, and Nek7, during mitosis, resulting in their activation. Length = 256

>gnl|CDD|133201 cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

 Score = 50.4 bits (120), Expect = 4e-08
 Identities = 39/124 (31%), Positives = 66/124 (53%), Gaps = 7/124 (5%)

Query: 27  CQIDEDLTARINMADAQFSFQQRGRCYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWE 86
           C+I +   AR+ + D +++ +Q G  +   W +PEA     G   +++ D+WSF +LL E
Sbjct: 141 CKIADFGLARL-IEDNEYTARQ-GAKFPIKWTAPEAALY--GRFTIKS-DVWSFGILLTE 195

Query: 87  LATR-EVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVL 145
           L T+  VP+  +   EV  +V   G R+  P      L +L+  C  +DP +RPTF+ + 
Sbjct: 196 LVTKGRVPYPGMNNREVLEQVE-RGYRMPCPQDCPISLHELMLQCWKKDPEERPTFEYLQ 254

Query: 146 PILD 149
             L+
Sbjct: 255 SFLE 258

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Fyn, together with Lck, plays a critical role in T-cell signal transduction by phosphorylating ITAM (immunoreceptor tyr activation motif) sequences on T-cell receptors, ultimately leading to the proliferation and differentiation of T-cells. In addition, Fyn is involved in the myelination of neurons, and is implicated in Alzheimer's and Parkinson's diseases. Yrk has been detected only in chickens. It is primarily found in neuronal and epithelial cells and in macrophages. It may play a role in inflammation and in response to injury. Length = 260

>gnl|CDD|132976 cd06645, STKc_MAP4K3, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

 Score = 50.4 bits (120), Expect = 4e-08
 Identities = 29/99 (29%), Positives = 49/99 (49%), Gaps = 13/99 (13%)

Query: 55  PAWMSPE--ALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLR 112
           P WM+PE  A+++K G   L  CD+W+  +   ELA  + P  DL PM     +     +
Sbjct: 170 PYWMAPEVAAVERKGGYNQL--CDIWAVGITAIELAELQPPMFDLHPMRALFLMTKSNFQ 227

Query: 113 ITIPPGI------SSHLSKLIRICMNEDPGKRPTFDMVL 145
              PP +      S+     +++ + ++P KRPT + +L
Sbjct: 228 ---PPKLKDKMKWSNSFHHFVKMALTKNPKKRPTAEKLL 263

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. MAP4K3 is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. mTOR regulates ribosome biogenesis and protein translation, and is frequently deregulated in cancer. Length = 267

>gnl|CDD|133202 cd05071, PTKc_Src, Catalytic domain of the Protein Tyrosine Kinase, Src

 Score = 50.0 bits (119), Expect = 5e-08
 Identities = 38/124 (30%), Positives = 63/124 (50%), Gaps = 7/124 (5%)

Query: 27  CQIDEDLTARINMADAQFSFQQRGRCYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWE 86
           C++ +   AR+ + D +++ +Q G  +   W +PEA       R     D+WSF +LL E
Sbjct: 141 CKVADFGLARL-IEDNEYTARQ-GAKFPIKWTAPEAALY---GRFTIKSDVWSFGILLTE 195

Query: 87  LATR-EVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVL 145
           L T+  VP+  +   EV  +V   G R+  PP     L  L+  C  ++P +RPTF+ + 
Sbjct: 196 LTTKGRVPYPGMVNREVLDQVE-RGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQ 254

Query: 146 PILD 149
             L+
Sbjct: 255 AFLE 258

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Src also play a role in regulating cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Elevated levels of Src kinase activity have been reported in a variety of human cancers. Several inhibitors of Src have been developed as anti-cancer drugs. Src is also implicated in acute inflammatory responses and osteoclast function. Length = 262

>gnl|CDD|132972 cd06641, STKc_MST3, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

 Score = 50.1 bits (119), Expect = 6e-08
 Identities = 28/90 (31%), Positives = 44/90 (48%), Gaps = 12/90 (13%)

Query: 55  PAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRIT 114
           P WM+PE +++   D      D+WS  +   ELA  E P ++L PM+V   +        
Sbjct: 165 PFWMAPEVIKQSAYD---SKADIWSLGITAIELAKGEPPHSELHPMKVLFLIPKNN---- 217

Query: 115 IPPGISSHLSK----LIRICMNEDPGKRPT 140
            PP +  + SK     +  C+N++P  RPT
Sbjct: 218 -PPTLEGNYSKPLKEFVEACLNKEPSFRPT 246

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and intrauterine growth retardation. Length = 277

>gnl|CDD|173637 cd05059, PTKc_Tec_like, Catalytic domain of Tec-like Protein Tyrosine Kinases

 Score = 49.8 bits (119), Expect = 6e-08
 Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 5/90 (5%)

Query: 57  WMSPEALQKKPGDRNLEACDMWSFAVLLWELATR-EVPFADLTPMEVGMKVALEGLRITI 115
           W  PE        R     D+WSF VL+WE+ +  ++P+   +  EV   V+  G R+  
Sbjct: 167 WAPPEVFDY---SRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEVVESVS-AGYRLYR 222

Query: 116 PPGISSHLSKLIRICMNEDPGKRPTFDMVL 145
           P    + +  ++  C +E P  RP F  +L
Sbjct: 223 PKLAPTEVYTIMYSCWHEKPEDRPAFKKLL 252

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases form the second largest subfamily of nRTKs and are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. The function of Tec kinases in lymphoid cells have been studied extensively. They play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. Mutations in Btk cause the severe B-cell immunodeficiency, X-linked agammaglobulinaemia (XLA). Length = 256

>gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

 Score = 49.7 bits (119), Expect = 7e-08
 Identities = 30/107 (28%), Positives = 49/107 (45%), Gaps = 17/107 (15%)

Query: 57  WMSPEALQKKPGDRNLEACDMWSFAVLLWELATR----EVPFADLTPMEVGMKVAL---- 108
           W +PE L+     +   A D+WSF V L+EL T     + P A+   M    +  +    
Sbjct: 178 WYAPECLRT---SKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTR 234

Query: 109 ------EGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILD 149
                 EG R+  PP     +  L+++C   +P  RP+F  ++ I+D
Sbjct: 235 LLELLKEGERLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVD 281

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284

>gnl|CDD|133191 cd05060, PTKc_Syk_like, Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

 Score = 49.7 bits (119), Expect = 8e-08
 Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 2/67 (2%)

Query: 76  DMWSFAVLLWELATR-EVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNED 134
           D+WS+ V LWE  +    P+ ++   EV + +   G R+  P      +  ++  C    
Sbjct: 180 DVWSYGVTLWEAFSYGAKPYGEMKGAEV-IAMLESGERLPRPEECPQEIYSIMLSCWKYR 238

Query: 135 PGKRPTF 141
           P  RPTF
Sbjct: 239 PEDRPTF 245

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. Syk is important in B-cell receptor (BCR) signaling, while Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Syk also plays a central role in Fc receptor-mediated phagocytosis in the adaptive immune system. Shark is exclusively expressed in ectodermally derived epithelia, and is localized preferentially to the apical surface of the epithelial cells, it may play a role in a signaling pathway for epithelial cell polarity. Length = 257

>gnl|CDD|173663 cd05572, STKc_cGK_PKG, Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

 Score = 49.5 bits (119), Expect = 8e-08
 Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 7/90 (7%)

Query: 52  CYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFA--DLTPMEVGMKVALE 109
           C  P +++PE +  K  D    + D WS  +LL+EL T   PF   D  PME+     L+
Sbjct: 153 CGTPEYVAPEIILNKGYDF---SVDYWSLGILLYELLTGRPPFGEDDEDPMEI-YNDILK 208

Query: 110 GL-RITIPPGISSHLSKLIRICMNEDPGKR 138
           G  ++  P  I      LI+  +  +P +R
Sbjct: 209 GNGKLEFPNYIDKAAKDLIKQLLRRNPEER 238

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowing autophosphorylation and activation of the kinase. cGKI is a soluble protein expressed in all smooth muscles, platelets, cerebellum, and kidney. It is also expressed at lower concentrations in other tissues. cGKII is a membrane-bound protein that is most abundantly expressed in the intestine. It is also present in the brain nuclei, adrenal cortex, kidney, lung, and prostate. cGKI is involved in the regulation of smooth muscle tone, smooth cell proliferation, and platelet activation. cGKII plays a role in the regulation of secretion, such as renin secretion by the kidney and aldosterone secretion by the adrenal. It also regulates bone growth and the circadian rhythm. Length = 262

>gnl|CDD|173658 cd05114, PTKc_Tec_Rlk, Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

 Score = 48.7 bits (116), Expect = 1e-07
 Identities = 28/94 (29%), Positives = 46/94 (48%), Gaps = 5/94 (5%)

Query: 57  WMSPEALQKKPGDRNLEACDMWSFAVLLWELATR-EVPFADLTPMEVGMKVALEGLRITI 115
           W  PE        +     D+WSF VL+WE+ T  ++PF   +  EV +++   G R+  
Sbjct: 167 WSPPEVFNFS---KYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEV-VEMISRGFRLYR 222

Query: 116 PPGISSHLSKLIRICMNEDPGKRPTFDMVLPILD 149
           P   S  + +++  C +E P  RPTF  +L  + 
Sbjct: 223 PKLASMTVYEVMYSCWHEKPEGRPTFAELLRAIT 256

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. Instead of PH, Rlk contains an N-terminal cysteine-rich region. In addition to PH, Tec also contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Tec is more widely-expressed than other Tec subfamily kinases. It is found in endothelial cells, both B- and T-cells, and a variety of myeloid cells including mast cells, erythroid cells, platelets, macrophages and neutrophils. Rlk is expressed in T-cells and mast cell lines. Tec and Rlk are both key components of T-cell receptor (TCR) signaling. They are important in TCR-stimulated proliferation, IL-2 production and phopholipase C-gamma1 activation. Length = 256

>gnl|CDD|173633 cd05052, PTKc_Abl, Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

 Score = 48.7 bits (116), Expect = 1e-07
 Identities = 39/133 (29%), Positives = 60/133 (45%), Gaps = 26/133 (19%)

Query: 29  IDEDLTAR---------INMADAQFSFQQRGRCY-------YP-AWMSPEALQKKPGDRN 71
           I  DL AR         + +AD   S    G  Y       +P  W +PE+L     ++ 
Sbjct: 126 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY---NKF 182

Query: 72  LEACDMWSFAVLLWELAT---REVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIR 128
               D+W+F VLLWE+AT      P  DL+ +   ++   +G R+  P G    + +L+R
Sbjct: 183 SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE---KGYRMERPEGCPPKVYELMR 239

Query: 129 ICMNEDPGKRPTF 141
            C   +P  RP+F
Sbjct: 240 ACWQWNPSDRPSF 252

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays a role in cell proliferation and survival. In response to DNA damage or oxidative stress, Abl is transported to the nucleus where it induces apoptosis. In chronic myelogenous leukemia (CML) patients, an aberrant translocation results in the replacement of the first exon of Abl with the BCR (breakpoint cluster region) gene. The resulting BCR-Abl fusion protein is constitutively active and associates into tetramers, resulting in a hyperactive kinase sending a continuous signal. This leads to uncontrolled proliferation, morphological transformation and anti-apoptotic effects. BCR-Abl is the target of selective inhibitors, such as imatinib (Gleevec), used in the treatment of CML. Abl2, also known as ARG (Abelson-related gene), is thought to play a cooperative role with Abl in the proper development of the nervous system. The Tel-ARG fusion protein, resulting from reciprocal translocation between chromosomes 1 and 12, is associated with acute myeloid leukemia (AML). The TEL gene is a frequent fusion partner of other tyr kinase oncogenes, including Tel/Abl, Tel/PDGFRbeta, and Tel/Jak2, found in patients with leukemia and myeloproliferative disorders. Length = 263

>gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

 Score = 48.2 bits (115), Expect = 2e-07
 Identities = 25/86 (29%), Positives = 41/86 (47%), Gaps = 5/86 (5%)

Query: 57  WMSPEALQKKPGDRNLEACDMWSFAVLLWELATR-EVPFADLTPMEVGMKVALEGLRITI 115
           W +PEA             D+WSF +LL+E+ T  +VP+  +   EV  ++   G R+  
Sbjct: 170 WTAPEAASHG---TFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHEVYDQIT-AGYRMPC 225

Query: 116 PPGISSHLSKLIRICMNEDPGKRPTF 141
           P      + K++  C   +P  RP+F
Sbjct: 226 PAKCPQEIYKIMLECWAAEPEDRPSF 251

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261

>gnl|CDD|132969 cd06638, STKc_myosinIIIA, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

 Score = 48.1 bits (114), Expect = 2e-07
 Identities = 31/99 (31%), Positives = 45/99 (45%), Gaps = 13/99 (13%)

Query: 55  PAWMSPE--ALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLR 112
           P WM+PE  A +++        CD+WS  +   EL   + P ADL PM    K+      
Sbjct: 188 PFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRALFKIPRNP-- 245

Query: 113 ITIPPGI------SSHLSKLIRICMNEDPGKRPTFDMVL 145
              PP +      S+  +  IR C+ +D  KRPT   +L
Sbjct: 246 ---PPTLHQPELWSNEFNDFIRKCLTKDYEKRPTVSDLL 281

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear hair cells. It is localized to the distal ends of actin-bundled structures. Mutations in human myosin IIIA are responsible for progressive nonsyndromic hearing loss. Human myosin IIIA possesses ATPase and kinase activities, and the ability to move actin filaments in a motility assay. It may function as a cellular transporter capable of moving along actin bundles in sensory cells. Length = 286

>gnl|CDD|132977 cd06646, STKc_MAP4K5, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

 Score = 48.1 bits (114), Expect = 3e-07
 Identities = 31/99 (31%), Positives = 49/99 (49%), Gaps = 13/99 (13%)

Query: 55  PAWMSPE--ALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLR 112
           P WM+PE  A++K  G   L  CD+W+  +   ELA  + P  DL PM     ++    +
Sbjct: 170 PYWMAPEVAAVEKNGGYNQL--CDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSNFQ 227

Query: 113 ITIPPGI------SSHLSKLIRICMNEDPGKRPTFDMVL 145
              PP +      SS     ++I + ++P KRPT + +L
Sbjct: 228 ---PPKLKDKTKWSSTFHNFVKISLTKNPKKRPTAERLL 263

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). MAP4K5 also facilitates Wnt signaling in B cells, and may therefore be implicated in the control of cell fate, proliferation, and polarity. Length = 267

>gnl|CDD|173643 cd05077, PTK_Jak1_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

 Score = 48.0 bits (114), Expect = 3e-07
 Identities = 29/91 (31%), Positives = 43/91 (47%), Gaps = 8/91 (8%)

Query: 57  WMSPEALQKKPGDRNLE-ACDMWSFAVLLWELATR-EVPFADLTPMEVGMKVALEGLRIT 114
           W++PE ++     +NL  A D WSF   LWE+    E+P  D T  E   K      +  
Sbjct: 174 WIAPECVEDS---KNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAE---KERFYEGQCM 227

Query: 115 IPPGISSHLSKLIRICMNEDPGKRPTFDMVL 145
           +       L+ L+  CMN DP +RP F  ++
Sbjct: 228 LVTPSCKELADLMTHCMNYDPNQRPFFRAIM 258

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 262

>gnl|CDD|133238 cd05107, PTKc_PDGFR_beta, Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

 Score = 48.5 bits (115), Expect = 3e-07
 Identities = 35/122 (28%), Positives = 61/122 (50%), Gaps = 13/122 (10%)

Query: 35  ARINMADAQFSFQQRGRCYYP-AWMSPEALQKKPGDRNLEAC--DMWSFAVLLWELATR- 90
           AR  M D+  ++  +G  + P  WM+PE++       NL     D+WSF +LLWE+ T  
Sbjct: 286 ARDIMRDS--NYISKGSTFLPLKWMAPESIFN-----NLYTTLSDVWSFGILLWEIFTLG 338

Query: 91  EVPFADLTPMEVGMKVALE-GLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILD 149
             P+ +L PM      A++ G R+  P   S  + ++++ C  E    RP F  ++ ++ 
Sbjct: 339 GTPYPEL-PMNEQFYNAIKRGYRMAKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHLVG 397

Query: 150 KM 151
            +
Sbjct: 398 DL 399

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-DD induce PDGFR beta homodimerization. PDGFR signaling plays many roles in normal embryonic development and adult physiology. PDGFR beta signaling leads to a variety of cellular effects including the stimulation of cell growth and chemotaxis, as well as the inhibition of apoptosis and GAP junctional communication. It is critical in normal angiogenesis as it is involved in the recruitment of pericytes and smooth muscle cells essential for vessel stability. Aberrant PDGFR beta expression is associated with some human cancers. The continuously-active fusion proteins of PDGFR beta with COL1A1 and TEL are associated with dermatofibrosarcoma protuberans (DFSP) and a subset of chronic myelomonocytic leukemia (CMML), respectively. Length = 401

>gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

 Score = 48.0 bits (115), Expect = 3e-07
 Identities = 24/96 (25%), Positives = 44/96 (45%), Gaps = 22/96 (22%)

Query: 55  PAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRIT 114
           P WM+PE +Q+   +      D+WS  +   E+A  + P++D+ PM   +          
Sbjct: 163 PFWMAPEVIQEIGYN---NKADIWSLGITAIEMAEGKPPYSDIHPMRA-I--------FM 210

Query: 115 I----PPGI------SSHLSKLIRICMNEDPGKRPT 140
           I    PP +      S   +  ++ C+ +DP +RP+
Sbjct: 211 IPNKPPPTLSDPEKWSPEFNDFVKKCLVKDPEERPS 246

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256

>gnl|CDD|173769 cd08229, STKc_Nek7, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

 Score = 48.1 bits (114), Expect = 3e-07
 Identities = 35/106 (33%), Positives = 51/106 (48%), Gaps = 19/106 (17%)

Query: 55  PAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRIT 114
           P +MSPE + +     N ++ D+WS   LL+E+A  + PF        G K+ L  L   
Sbjct: 170 PYYMSPERIHEN--GYNFKS-DIWSLGCLLYEMAALQSPF-------YGDKMNLYSLCKK 219

Query: 115 I-----PPGISSH----LSKLIRICMNEDPGKRPTFDMVLPILDKM 151
           I     PP  S H    L +L+ +C+N DP KRP    V  +  +M
Sbjct: 220 IEQCDYPPLPSDHYSEELRQLVNMCINPDPEKRPDITYVYDVAKRM 265

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|132962 cd06631, STKc_YSK4, Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

 Score = 47.6 bits (113), Expect = 3e-07
 Identities = 24/92 (26%), Positives = 42/92 (45%), Gaps = 4/92 (4%)

Query: 55  PAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKV-ALEGLRI 113
           P WM+PE + +    R     D+WS    ++E+AT + P A +  +     + A  GL  
Sbjct: 172 PYWMAPEVINESGYGRK---SDIWSIGCTVFEMATGKPPLASMDRLAAMFYIGAHRGLMP 228

Query: 114 TIPPGISSHLSKLIRICMNEDPGKRPTFDMVL 145
            +P   S+     +  C+  D  +RP+   +L
Sbjct: 229 RLPDSFSAAAIDFVTSCLTRDQHERPSALQLL 260

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Length = 265

>gnl|CDD|140289 PTZ00263, PTZ00263, protein kinase A catalytic subunit; Provisional

 Score = 47.9 bits (114), Expect = 3e-07
 Identities = 31/111 (27%), Positives = 48/111 (43%), Gaps = 9/111 (8%)

Query: 32  DLTARINMADAQFSFQQRGR----CYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWEL 87
           D    + + D  F+ +   R    C  P +++PE +Q K   +   A D W+  VLL+E 
Sbjct: 152 DNKGHVKVTDFGFAKKVPDRTFTLCGTPEYLAPEVIQSKGHGK---AVDWWTMGVLLYEF 208

Query: 88  ATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKR 138
                PF D TP  +  K+ L G R+  P         L++  +  D  KR
Sbjct: 209 IAGYPPFFDDTPFRIYEKI-LAG-RLKFPNWFDGRARDLVKGLLQTDHTKR 257

Length = 329

>gnl|CDD|173627 cd05037, PTK_Jak_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

 Score = 47.5 bits (113), Expect = 4e-07
 Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 7/91 (7%)

Query: 57  WMSPEALQKKPGDRNLE-ACDMWSFAVLLWELATR-EVPFADLTPMEVGMKVALEGLRIT 114
           W++PE +  + G  +L  A D WSF   L E+ +  E P + L+  E       +  R+ 
Sbjct: 170 WIAPECI--RNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEKERFYQ-DQHRLP 226

Query: 115 IPPGISSHLSKLIRICMNEDPGKRPTFDMVL 145
           +P    + L+ LI  C   DP KRP+F  +L
Sbjct: 227 MPD--CAELANLINQCWTYDPTKRPSFRAIL 255

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 259

>gnl|CDD|133235 cd05104, PTKc_Kit, Catalytic domain of the Protein Tyrosine Kinase, Kit

 Score = 47.6 bits (113), Expect = 4e-07
 Identities = 27/101 (26%), Positives = 50/101 (49%), Gaps = 16/101 (15%)

Query: 57  WMSPEALQKKPGDRNLEAC------DMWSFAVLLWEL-ATREVPFADLTPMEVGMKVALE 109
           WM+PE++           C      D+WS+ +LLWE+ +    P+  +       K+  E
Sbjct: 282 WMAPESIFN---------CVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDSKFYKMIKE 332

Query: 110 GLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDK 150
           G R+  P    S +  +++ C + DP KRPTF  ++ ++++
Sbjct: 333 GYRMLSPECAPSEMYDIMKSCWDADPLKRPTFKQIVQLIEQ 373

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. Kit signaling is involved in major cellular functions including cell survival, proliferation, differentiation, adhesion, and chemotaxis. Mutations in Kit, which result in constitutive ligand-independent activation, are found in human cancers such as gastrointestinal stromal tumor (GIST) and testicular germ cell tumor (TGCT). The aberrant expression of Kit and/or SCF is associated with other tumor types such as systemic mastocytosis and cancers of the breast, neurons, lung, prostate, colon, and rectum. Although the structure of the human Kit catalytic domain is known, it is excluded from this specific alignment model because it contains a deletion in its sequence. Length = 375

>gnl|CDD|173657 cd05113, PTKc_Btk_Bmx, Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

 Score = 47.2 bits (112), Expect = 5e-07
 Identities = 23/71 (32%), Positives = 40/71 (56%), Gaps = 2/71 (2%)

Query: 76  DMWSFAVLLWELATR-EVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNED 134
           D+W+F VL+WE+ +  ++P+      E   KV+ +GLR+  P   S  +  ++  C +E 
Sbjct: 183 DVWAFGVLMWEVYSLGKMPYERFNNSETVEKVS-QGLRLYRPHLASEKVYAIMYSCWHEK 241

Query: 135 PGKRPTFDMVL 145
             +RPTF  +L
Sbjct: 242 AEERPTFQQLL 252

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Btk contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Btk is expressed in B-cells, and a variety of myeloid cells including mast cells, platelets, neutrophils, and dendrictic cells. It interacts with a variety of partners, from cytosolic proteins to nuclear transcription factors, suggesting a diversity of functions. Stimulation of a diverse array of cell surface receptors, including antigen engagement of the B-cell receptor (BCR), leads to PH-mediated membrane translocation of Btk and subsequent phosphorylation by Src kinase and activation. Btk plays an important role in the life cycle of B-cells including their development, differentiation, proliferation, survival, and apoptosis. Mutations in Btk cause the primary immunodeficiency disease, X-linked agammaglobulinaemia (XLA) in humans. Bmx is primarily expressed in bone marrow and the arterial endothelium, and plays an important role in ischemia-induced angiogenesis. It facilitates arterial growth, capillary formation, vessel maturation, and bone marrow-derived endothelial progenitor cell mobilization. Length = 256

>gnl|CDD|133167 cd05035, PTKc_Axl_like, Catalytic Domain of Axl-like Protein Tyrosine Kinases

 Score = 47.1 bits (112), Expect = 6e-07
 Identities = 39/136 (28%), Positives = 62/136 (45%), Gaps = 18/136 (13%)

Query: 27  CQIDEDLTARINMADAQFSFQQRGRCYY--------PA-WMSPEALQKKPGDRNLEA-CD 76
           C + ED+T  + +AD   S +     YY        P  W++ E+L     DR   +  D
Sbjct: 144 CMLREDMT--VCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESL----ADRVYTSKSD 197

Query: 77  MWSFAVLLWELATR-EVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDP 135
           +W+F V +WE+ATR + P+  +   E+       G R+  P      L  L+  C   DP
Sbjct: 198 VWAFGVTMWEIATRGQTPYPGVENHEI-YDYLRHGNRLKQPEDCLDELYDLMYSCWRADP 256

Query: 136 GKRPTFDMVLPILDKM 151
             RPTF  +  +L+ +
Sbjct: 257 KDRPTFTKLREVLENI 272

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellular effects including survival, proliferation, migration, and phagocytosis. They are also associated with several types of cancer as well as inflammatory, autoimmune, vascular, and kidney diseases. Mer is named after its original reported expression pattern (monocytes, epithelial, and reproductive tissues). It is required for the ingestion of apoptotic cells by phagocytes such as macrophages, retinal pigment epithelial cells, and dendritic cells. Mer is also important in maintaining immune homeostasis. Length = 273

>gnl|CDD|133233 cd05102, PTKc_VEGFR3, Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

 Score = 46.9 bits (111), Expect = 8e-07
 Identities = 28/93 (30%), Positives = 47/93 (50%), Gaps = 4/93 (4%)

Query: 57  WMSPEALQKKPGDRNLEACDMWSFAVLLWEL-ATREVPFADLTPMEVGMKVALEGLRITI 115
           WM+PE++  K         D+WSF VLLWE+ +    P+  +   E   +   +G R+  
Sbjct: 242 WMAPESIFDKV---YTTQSDVWSFGVLLWEIFSLGASPYPGVQINEEFCQRLKDGTRMRA 298

Query: 116 PPGISSHLSKLIRICMNEDPGKRPTFDMVLPIL 148
           P   +  + +++  C   DP +RPTF  ++ IL
Sbjct: 299 PENATPEIYRIMLACWQGDPKERPTFSALVEIL 331

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. VEGFR3 preferentially binds the ligands VEGFC and VEGFD. VEGFR3 is essential for lymphatic endothelial cell (EC) development and function. It has been shown to regulate adaptive immunity during corneal transplantation. VEGFR3 is upregulated on blood vascular ECs in pathological conditions such as vascular tumors and the periphery of solid tumors. It plays a role in cancer progression and lymph node metastasis. Missense mutations in the VEGFR3 gene are associated with primary human lymphedema. Length = 338

>gnl|CDD|133186 cd05055, PTKc_PDGFR, Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

 Score = 46.3 bits (110), Expect = 1e-06
 Identities = 32/121 (26%), Positives = 59/121 (48%), Gaps = 11/121 (9%)

Query: 35  ARINMADAQFSFQQRGRCYYPA-WMSPEALQKKPGDRNLEA--CDMWSFAVLLWELATRE 91
           AR  M D+  ++  +G    P  WM+PE++        +     D+WS+ +LLWE+ +  
Sbjct: 188 ARDIMNDS--NYVVKGNARLPVKWMAPESIFN-----CVYTFESDVWSYGILLWEIFSLG 240

Query: 92  V-PFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDK 150
             P+  +       K+  EG R+  P    + +  +++ C + DP KRPTF  ++ ++ K
Sbjct: 241 SNPYPGMPVDSKFYKLIKEGYRMAQPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGK 300

Query: 151 M 151
            
Sbjct: 301 Q 301

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR subfamily receptors are important in the development of a variety of cells. PDGFRs are expressed in a many cells including fibroblasts, neurons, endometrial cells, mammary epithelial cells, and vascular smooth muscle cells. PDGFR signaling is critical in normal embryonic development, angiogenesis, and wound healing. PDGFRs transduce mitogenic signals for connective tissue cells and are important for cell shape and motility. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. Mammalian FLT3 plays an important role in the survival, proliferation, and differentiation of stem cells. Length = 302

>gnl|CDD|173762 cd08222, STKc_Nek11, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

 Score = 46.5 bits (110), Expect = 1e-06
 Identities = 25/86 (29%), Positives = 46/86 (53%), Gaps = 4/86 (4%)

Query: 55  PAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRIT 114
           P +MSPEAL+ +  D      D+WS   +L+E+      F     + V +++ +EG   +
Sbjct: 169 PYYMSPEALKHQGYDSK---SDIWSLGCILYEMCCLAHAFEGQNFLSVVLRI-VEGPTPS 224

Query: 115 IPPGISSHLSKLIRICMNEDPGKRPT 140
           +P   S  L+ +++  +N+DP  RP+
Sbjct: 225 LPETYSRQLNSIMQSMLNKDPSLRPS 250

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M checkpoint. Nek11 may also play a role in the S-phase checkpoint as well as in DNA replication and genotoxic stress responses. Length = 260

>gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

 Score = 46.4 bits (111), Expect = 1e-06
 Identities = 21/89 (23%), Positives = 38/89 (42%), Gaps = 7/89 (7%)

Query: 55  PAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKV-ALEGLRI 113
             ++SPE L +KP     ++ D+W+   +++++ T + PF          K+  LE    
Sbjct: 186 AEYVSPELLNEKPAG---KSSDLWALGCIIYQMLTGKPPFRGSNEYLTFQKILKLE---Y 239

Query: 114 TIPPGISSHLSKLIRICMNEDPGKRPTFD 142
           + PP        LI   +  DP  R   +
Sbjct: 240 SFPPNFPPDAKDLIEKLLVLDPQDRLGVN 268

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280

>gnl|CDD|173670 cd05579, STKc_MAST_like, Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

 Score = 46.1 bits (110), Expect = 1e-06
 Identities = 24/87 (27%), Positives = 37/87 (42%), Gaps = 7/87 (8%)

Query: 55  PAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRIT 114
           P +++PE +  +   +     D WS   +L+E      PF   TP E+   + L G +I 
Sbjct: 165 PDYIAPEVILGQGHSK---TVDWWSLGCILYEFLVGIPPFHGETPEEIFQNI-LNG-KIE 219

Query: 115 IP--PGISSHLSKLIRICMNEDPGKRP 139
            P    +S     LI   +  DP KR 
Sbjct: 220 WPEDVEVSDEAIDLISKLLVPDPEKRL 246

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which also contains an insert relative to MAST kinases like MASTL. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. Length = 265

>gnl|CDD|133220 cd05089, PTKc_Tie1, Catalytic domain of the Protein Tyrosine Kinase, Tie1

 Score = 46.2 bits (109), Expect = 1e-06
 Identities = 29/96 (30%), Positives = 47/96 (48%), Gaps = 5/96 (5%)

Query: 57  WMSPEALQKKPGDRNLEACDMWSFAVLLWELATR-EVPFADLTPMEVGMKVALEGLRITI 115
           WM+ E+L            D+WSF VLLWE+ +    P+  +T  E+  K+  +G R+  
Sbjct: 184 WMAIESLNYSV---YTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAELYEKLP-QGYRMEK 239

Query: 116 PPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKM 151
           P      + +L+R C  + P +RP F  +   L +M
Sbjct: 240 PRNCDDEVYELMRQCWRDRPYERPPFAQISVQLSRM 275

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. In vivo studies of Tie1 show that it is critical in vascular development. Length = 297

>gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

 Score = 46.0 bits (109), Expect = 1e-06
 Identities = 28/89 (31%), Positives = 41/89 (46%), Gaps = 4/89 (4%)

Query: 57  WMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIP 116
           WM+PE +++    R     D+WS   L+ E+ T + PF D T ++   K+  E     IP
Sbjct: 178 WMAPEVVKQTSYTRK---ADIWSLGCLVVEMLTGKHPFPDCTQLQAIFKIG-ENASPEIP 233

Query: 117 PGISSHLSKLIRICMNEDPGKRPTFDMVL 145
             ISS     +      D  KRPT   +L
Sbjct: 234 SNISSEAIDFLEKTFEIDHNKRPTAAELL 262

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267

>gnl|CDD|88330 cd05047, PTKc_Tie, Catalytic domain of Tie Protein Tyrosine Kinases

 Score = 45.8 bits (108), Expect = 2e-06
 Identities = 30/96 (31%), Positives = 49/96 (51%), Gaps = 5/96 (5%)

Query: 57  WMSPEALQKKPGDRNLEACDMWSFAVLLWELATR-EVPFADLTPMEVGMKVALEGLRITI 115
           WM+ E+L            D+WS+ VLLWE+ +    P+  +T  E+  K+  +G R+  
Sbjct: 177 WMAIESLNYSV---YTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLP-QGYRLEK 232

Query: 116 PPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKM 151
           P      +  L+R C  E P +RP+F  +L  L++M
Sbjct: 233 PLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRM 268

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific ligand has been identified for Tie1. The binding of Ang-1 to Tie2 leads to receptor autophosphorylation and activation, promoting cell migration and survival. In contrast, Ang-2 binding to Tie2 does not result in the same response, suggesting that Ang-2 may function as an antagonist. In vivo studies of Tie1 show that it is critical in vascular development. Length = 270

>gnl|CDD|173730 cd06624, STKc_ASK, Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

 Score = 45.6 bits (108), Expect = 2e-06
 Identities = 27/85 (31%), Positives = 41/85 (48%), Gaps = 2/85 (2%)

Query: 57  WMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGM-KVALEGLRITI 115
           +M+PE + K P      A D+WS    + E+AT + PF +L   +  M KV +  +   I
Sbjct: 175 YMAPEVIDKGPRGYGAPA-DIWSLGCTIVEMATGKPPFIELGEPQAAMFKVGMFKIHPEI 233

Query: 116 PPGISSHLSKLIRICMNEDPGKRPT 140
           P  +S+     I  C   DP KR +
Sbjct: 234 PESLSAEAKNFILRCFEPDPDKRAS 258

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species (ROS)-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. Length = 268

>gnl|CDD|132975 cd06644, STKc_STK10_LOK, Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

 Score = 45.8 bits (108), Expect = 2e-06
 Identities = 27/92 (29%), Positives = 44/92 (47%), Gaps = 9/92 (9%)

Query: 55  PAWMSPE-----ALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVA-L 108
           P WM+PE      ++  P D      D+WS  + L E+A  E P  +L PM V +K+A  
Sbjct: 174 PYWMAPEVVMCETMKDTPYDYK---ADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKS 230

Query: 109 EGLRITIPPGISSHLSKLIRICMNEDPGKRPT 140
           E   ++ P   S      ++  +++ P  RP+
Sbjct: 231 EPPTLSQPSKWSMEFRDFLKTALDKHPETRPS 262

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. Length = 292

>gnl|CDD|132949 cd06618, PKc_MKK7, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

 Score = 45.4 bits (108), Expect = 2e-06
 Identities = 28/99 (28%), Positives = 45/99 (45%), Gaps = 13/99 (13%)

Query: 55  PAWMSPEALQKKPGDRNLEA-CDMWSFAVLLWELATREVPFADL-TPMEVGMKVALEGLR 112
            A+M+PE +     +   +   D+WS  + L ELAT + P+ +  T  EV  K+  E   
Sbjct: 178 AAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEFEVLTKILQEE-- 235

Query: 113 ITIPP------GISSHLSKLIRICMNEDPGKRPTFDMVL 145
              PP      G S      + +C+ +D  KRP +  +L
Sbjct: 236 ---PPSLPPNEGFSPDFCSFVDLCLTKDHRKRPKYRELL 271

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates its downstream target, c-Jun N-terminal kinase (JNK), on specific threonine and tyrosine residues. Although MKK7 is capable of dual phosphorylation, it prefers to phosphorylate the threonine residue of JNK. Thus, optimal activation of JNK requires both MKK4 (not included in this subfamily) and MKK7. MKK7 is primarily activated by cytokines. MKK7 is essential for liver formation during embryogenesis. It plays roles in G2/M cell cycle arrest and cell growth. In addition, it is involved in the control of programmed cell death, which is crucial in oncogenesis, cancer chemoresistance, and antagonism to TNFalpha-induced killing, through its inhibition by Gadd45beta and the subsequent suppression of the JNK cascade. Length = 296

>gnl|CDD|173725 cd06608, STKc_myosinIII_like, Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

 Score = 45.3 bits (108), Expect = 3e-06
 Identities = 28/95 (29%), Positives = 44/95 (46%), Gaps = 15/95 (15%)

Query: 55  PAWMSPE--ALQKKPGDRNLEA-CDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGL 111
           P WM+PE  A  ++P D + +A  D+WS  +   ELA  + P  D+ PM    K+     
Sbjct: 177 PYWMAPEVIACDEQP-DASYDARSDVWSLGITAIELADGKPPLCDMHPMRALFKI----P 231

Query: 112 RITIPPGISS------HLSKLIRICMNEDPGKRPT 140
           R   PP + S        +  I  C+ ++  +RP 
Sbjct: 232 R-NPPPTLKSPENWSKKFNDFISECLIKNYEQRPF 265

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin III may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. It may also function as a cargo carrier during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. The Drosophila class III myosin, called NinaC (Neither inactivation nor afterpotential protein C), is critical in normal adaptation and termination of photoresponse. Vertebrates contain two isoforms of class III myosin, IIIA and IIIB. This subfamily also includes mammalian NIK-like embryo-specific kinase (NESK), Traf2- and Nck-interacting kinase (TNIK), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6). MAP4Ks are involved in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Length = 275

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score = 45.5 bits (106), Expect = 3e-06
 Identities = 24/100 (24%), Positives = 37/100 (37%), Gaps = 11/100 (11%)

Query: 52  CYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPM----------- 100
              P +M+PE L          + D+WS  + L+EL T   PF                 
Sbjct: 169 VGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIIL 228

Query: 101 EVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPT 140
           E+        L  + P  IS   S L++  + +DP  R +
Sbjct: 229 ELPTPSLASPLSPSNPELISKAASDLLKKLLAKDPKNRLS 268

Length = 384

>gnl|CDD|133234 cd05103, PTKc_VEGFR2, Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

 Score = 45.4 bits (107), Expect = 3e-06
 Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 4/86 (4%)

Query: 57  WMSPEALQKKPGDRNLEACDMWSFAVLLWEL-ATREVPFADLTPMEVGMKVALEGLRITI 115
           WM+PE +  +         D+WSF VLLWE+ +    P+  +   E   +   EG R+  
Sbjct: 247 WMAPETIFDRV---YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRA 303

Query: 116 PPGISSHLSKLIRICMNEDPGKRPTF 141
           P   +  + + +  C + +P +RPTF
Sbjct: 304 PDYTTPEMYQTMLDCWHGEPSQRPTF 329

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosphorylation and activation. VEGFR2 binds the ligands VEGFA, VEGFC, VEGFD and VEGFE. VEGFR2 signaling is implicated in all aspects of normal and pathological vascular endothelial cell biology. It induces a variety of cellular effects including migration, survival, and proliferation. It is critical in regulating embryonic vascular development and angiogenesis. VEGFR2 is the major signal transducer in pathological angiogenesis including cancer and diabetic retinopathy, and is a target for inhibition in cancer therapy. Length = 343

>gnl|CDD|173689 cd05598, STKc_LATS, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

 Score = 45.2 bits (107), Expect = 3e-06
 Identities = 28/83 (33%), Positives = 40/83 (48%), Gaps = 6/83 (7%)

Query: 55  PAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVA--LEGLR 112
           P +++PE L +  G   L  CD WS  V+L+E+   + PF   TP E  +KV      L 
Sbjct: 208 PNYIAPEVLLRT-GYTQL--CDWWSVGVILYEMLVGQPPFLADTPAETQLKVINWETTLH 264

Query: 113 ITIPPGISSHLSKLI-RICMNED 134
           I     +S   S LI R+C   +
Sbjct: 265 IPSQAKLSREASDLILRLCCGAE 287

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Length = 376

>gnl|CDD|133216 cd05085, PTKc_Fer, Catalytic domain of the Protein Tyrosine Kinase, Fer

 Score = 45.0 bits (106), Expect = 3e-06
 Identities = 35/131 (26%), Positives = 57/131 (43%), Gaps = 22/131 (16%)

Query: 29  IDEDLTAR---------INMADAQFSFQQRGRCYYPA--------WMSPEALQKKPGDRN 71
           I  DL AR         + ++D   S Q+    Y  +        W +PEAL      R 
Sbjct: 115 IHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSSSGLKQIPIKWTAPEALNY---GRY 171

Query: 72  LEACDMWSFAVLLWELATREV-PFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRIC 130
               D+WS+ +LLWE  +  V P+  +T  +   +V  +G R++ P      + K+++ C
Sbjct: 172 SSESDVWSYGILLWETFSLGVCPYPGMTNQQAREQVE-KGYRMSCPQKCPDDVYKVMQRC 230

Query: 131 MNEDPGKRPTF 141
            +  P  RP F
Sbjct: 231 WDYKPENRPKF 241

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-cell interactions mediated by adherens junctions and focal adhesions. Fer kinase also regulates cell cycle progression in malignant cells. Length = 250

>gnl|CDD|132991 cd06917, STKc_NAK1_like, Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

 Score = 44.7 bits (106), Expect = 3e-06
 Identities = 27/103 (26%), Positives = 49/103 (47%), Gaps = 16/103 (15%)

Query: 55  PAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRIT 114
           P WM+PE + +  G       D+WS  + ++E+AT   P++D+      M +       +
Sbjct: 165 PYWMAPEVITE--GKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRAMMLIPK-----S 217

Query: 115 IPP-----GISSHLSKLIRICMNEDPGKRPTFDMVLPILDKMK 152
            PP     G S  L + +  C++E+P +R + + +L    K K
Sbjct: 218 KPPRLEDNGYSKLLREFVAACLDEEPKERLSAEELL----KSK 256

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of centrin, and phosphorylates substrates in a Cdc31p-dependent manner. Length = 277

>gnl|CDD|133243 cd05112, PTKc_Itk, Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

 Score = 44.9 bits (106), Expect = 3e-06
 Identities = 27/90 (30%), Positives = 45/90 (50%), Gaps = 5/90 (5%)

Query: 57  WMSPEALQKKPGDRNLEACDMWSFAVLLWELATR-EVPFADLTPMEVGMKVALEGLRITI 115
           W SPE        +     D+WSF VL+WE+ +  + P+ + +  EV   +   G R+  
Sbjct: 167 WSSPEVFSF---SKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSEVVETIN-AGFRLYK 222

Query: 116 PPGISSHLSKLIRICMNEDPGKRPTFDMVL 145
           P   S  + +L++ C  E P  RP+F ++L
Sbjct: 223 PRLASQSVYELMQHCWKERPEDRPSFSLLL 252

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Itk contains the Tec homology (TH) domain containing one proline-rich region and a zinc-binding region. Tec kinases are expressed mainly by haematopoietic cells. Itk is expressed in T-cells and mast cells, and is important in their development and differentiation. Of the three Tec kinases expressed in T-cells, Itk plays the predominant role in T-cell receptor (TCR) signaling. It is activated by phosphorylation upon TCR crosslinking and is involved in the pathway resulting in phospholipase C-gamma1 activation and actin polymerization. It also plays a role in the downstream signaling of the T-cell costimulatory receptor CD28, the T-cell surface receptor CD2, and the chemokine receptor CXCR4. In addition, Itk is crucial for the development of T-helper(Th)2 effector responses. Length = 256

>gnl|CDD|132951 cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

 Score = 44.8 bits (106), Expect = 3e-06
 Identities = 27/95 (28%), Positives = 43/95 (45%), Gaps = 14/95 (14%)

Query: 57  WMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFA---DLTPMEVGMKVALEGLRI 113
           +MSPE +Q   G +     D+WS  + + ELA  + PFA        +      L+ L+ 
Sbjct: 168 YMSPERIQ---GGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQ 224

Query: 114 TI---PPGISS-----HLSKLIRICMNEDPGKRPT 140
            +   PP + S      L   +  C+ +DP +RPT
Sbjct: 225 IVQEPPPRLPSSDFPEDLRDFVDACLLKDPTERPT 259

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Byr1 from Schizosaccharomyces pombe, FUZ7 from Ustilago maydis, and related proteins. Byr1 phosphorylates its downstream target, the MAPK Spk1, and is regulated by the MAPKKK Byr2. The Spk1 cascade is pheromone-responsive and is essential for sporulation and sexual differentiation in fission yeast. FUZ7 phosphorylates and activates its target, the MAPK Crk1, which is required in mating and virulence in U. maydis. Length = 284

>gnl|CDD|173644 cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

 Score = 44.9 bits (106), Expect = 4e-06
 Identities = 31/101 (30%), Positives = 45/101 (44%), Gaps = 21/101 (20%)

Query: 57  WMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMK----------- 105
           W +PE L +    +   A D+WSF V L+EL T     ++ +PM + +K           
Sbjct: 178 WYAPECLIQS---KFYIASDVWSFGVTLYELLT--YCDSESSPMTLFLKMIGPTHGQMTV 232

Query: 106 -----VALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTF 141
                V  EG R+  PP     + +L+R C    P KR TF
Sbjct: 233 TRLVRVLEEGKRLPRPPNCPEEVYQLMRKCWEFQPSKRTTF 273

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 284

>gnl|CDD|173664 cd05573, STKc_ROCK_NDR_like, Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

 Score = 45.0 bits (107), Expect = 4e-06
 Identities = 27/84 (32%), Positives = 37/84 (44%), Gaps = 7/84 (8%)

Query: 55  PAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVA--LEGLR 112
           P +++PE L+  P       CD WS  V+L+E+     PF   T  E   K+    E LR
Sbjct: 194 PDYIAPEVLRGTPYGLE---CDWWSLGVILYEMLYGFPPFYSDTLQETYNKIINWKESLR 250

Query: 113 ITIPPGISSHLSKLIR--ICMNED 134
               P +S     LI   +C  ED
Sbjct: 251 FPPDPPVSPEAIDLICRLLCDPED 274

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Proteins in this subfamily are involved in regulating many cellular functions including contraction, motility, division, proliferation, apoptosis, morphogenesis, and cytokinesis. Length = 350

>gnl|CDD|132983 cd06652, STKc_MEKK2, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

 Score = 44.3 bits (104), Expect = 5e-06
 Identities = 26/91 (28%), Positives = 42/91 (46%), Gaps = 4/91 (4%)

Query: 55  PAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRIT 114
           P WMSPE +    G+      D+WS    + E+ T + P+A+   M    K+A +     
Sbjct: 173 PYWMSPEVIS---GEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQPTNPV 229

Query: 115 IPPGISSHLSKLIRICMNEDPGKRPTFDMVL 145
           +PP +S H    ++    E    RP+ D +L
Sbjct: 230 LPPHVSDHCRDFLKRIFVE-AKLRPSADELL 259

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their respective MAPKKs MEK1/2, JNK-activating kinase 2 (JNKK2), and MKK3/6. MEKK2 plays roles in T cell receptor signaling, immune synapse formation, cytokine gene expression, as well as in EGF and FGF receptor signaling. Length = 265

>gnl|CDD|173768 cd08228, STKc_Nek6, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

 Score = 44.2 bits (104), Expect = 6e-06
 Identities = 33/107 (30%), Positives = 50/107 (46%), Gaps = 19/107 (17%)

Query: 55  PAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRIT 114
           P +MSPE + +     N ++ D+WS   LL+E+A  + PF        G K+ L  L   
Sbjct: 170 PYYMSPERIHEN--GYNFKS-DIWSLGCLLYEMAALQSPF-------YGDKMNLFSLCQK 219

Query: 115 I-----PPGISSHLSK----LIRICMNEDPGKRPTFDMVLPILDKMK 152
           I     PP  + H S+    L+ +C+  DP +RP    V  I  +M 
Sbjct: 220 IEQCDYPPLPTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQMH 266

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase and anaphase, and to the midbody during cytokinesis. Length = 267

>gnl|CDD|133205 cd05074, PTKc_Tyro3, Catalytic domain of the Protein Tyrosine Kinase, Tyro3

 Score = 44.1 bits (104), Expect = 7e-06
 Identities = 37/143 (25%), Positives = 67/143 (46%), Gaps = 20/143 (13%)

Query: 11  YLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQRGRCYYP---------AWMSPE 61
           YL+SK     +     C ++E++T  + +AD   S +     YY           W++ E
Sbjct: 128 YLSSKNFIHRDLAARNCMLNENMT--VCVADFGLSKKIYSGDYYRQGCASKLPVKWLALE 185

Query: 62  ALQKKPGDRNLEAC--DMWSFAVLLWELATR-EVPFADLTPMEVGMKVALEGLRITIPPG 118
           +L       N+     D+W+F V +WE+ TR + P+A +   E+     ++G R+  PP 
Sbjct: 186 SLAD-----NVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENSEI-YNYLIKGNRLKQPPD 239

Query: 119 ISSHLSKLIRICMNEDPGKRPTF 141
               + +L+  C + +P  RP+F
Sbjct: 240 CLEDVYELMCQCWSPEPKCRPSF 262

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic factor. It is also expressed in osteoclasts and has a role in bone resorption. Length = 273

>gnl|CDD|132989 cd06658, STKc_PAK5, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

 Score = 43.9 bits (103), Expect = 8e-06
 Identities = 31/138 (22%), Positives = 60/138 (43%), Gaps = 26/138 (18%)

Query: 9   SFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQRGRCYYPAWMSPEALQKKPG 68
           S  L S      + F FC Q+ +++  R ++               P WM+PE + + P 
Sbjct: 148 SILLTSDGRIKLSDFGFCAQVSKEVPKRKSLVGT------------PYWMAPEVISRLPY 195

Query: 69  DRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPP------GISSH 122
              +   D+WS  +++ E+   E P+ +  P++     A+  +R  +PP       +SS 
Sbjct: 196 GTEV---DIWSLGIMVIEMIDGEPPYFNEPPLQ-----AMRRIRDNLPPRVKDSHKVSSV 247

Query: 123 LSKLIRICMNEDPGKRPT 140
           L   + + +  +P +R T
Sbjct: 248 LRGFLDLMLVREPSQRAT 265

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly expressed in the brain. It is not required for viability, but together with PAK6, it is required for normal levels of locomotion and activity, and for learning and memory. PAK5 cooperates with Inca (induced in neural crest by AP2) in the regulation of cell adhesion and cytoskeletal organization in the embryo and in neural crest cells during craniofacial development. PAK5 may also play a role in controlling the signaling of Raf-1, an effector of Ras, at the mitochondria. Length = 292

>gnl|CDD|133209 cd05078, PTK_Jak2_Jak3_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

 Score = 43.7 bits (103), Expect = 9e-06
 Identities = 27/90 (30%), Positives = 46/90 (51%), Gaps = 6/90 (6%)

Query: 57  WMSPEALQKKPGDRNLEACDMWSFAVLLWELATR-EVPFADLTPMEVGMKVALEGLRITI 115
           W+ PE + + P + +L A D WSF   LWE+ +  + P + L   +   K+     R  +
Sbjct: 170 WVPPECI-ENPQNLSLAA-DKWSFGTTLWEIFSGGDKPLSALDSQK---KLQFYEDRHQL 224

Query: 116 PPGISSHLSKLIRICMNEDPGKRPTFDMVL 145
           P    + L+ LI  CM+ +P  RP+F  ++
Sbjct: 225 PAPKWTELANLINQCMDYEPDFRPSFRAII 254

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 258

>gnl|CDD|132990 cd06659, STKc_PAK6, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

 Score = 43.5 bits (102), Expect = 1e-05
 Identities = 31/124 (25%), Positives = 55/124 (44%), Gaps = 26/124 (20%)

Query: 23  FLFCCQIDEDLTARINMADAQFSFQQRGRCYYPAWMSPEALQKKPGDRNLEACDMWSFAV 82
           F FC QI +D+  R ++               P WM+PE + + P    +   D+WS  +
Sbjct: 161 FGFCAQISKDVPKRKSLVGT------------PYWMAPEVISRTPYGTEV---DIWSLGI 205

Query: 83  LLWELATREVPFADLTPMEVGMKVALEGLRITIPPG------ISSHLSKLIRICMNEDPG 136
           ++ E+   E P+   +P++     A++ LR + PP       IS  L   +   +  +P 
Sbjct: 206 MVIEMVDGEPPYFSDSPVQ-----AMKRLRDSPPPKLKNAHKISPVLRDFLERMLTREPQ 260

Query: 137 KRPT 140
           +R T
Sbjct: 261 ERAT 264

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role in stress responses through its activation by the mitogen-activated protein kinase (MAPK) p38 and MAPK kinase 6 (MKK6) pathway. PAK6 is highly expressed in the brain. It is not required for viability, but together with PAK5, it is required for normal levels of locomotion and activity, and for learning and memory. Increased expression of PAK6 is found in primary and metastatic prostate cancer. PAK6 may play a role in the regulation of motility. Length = 297

>gnl|CDD|132984 cd06653, STKc_MEKK3_like_1, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 43.5 bits (102), Expect = 1e-05
 Identities = 26/91 (28%), Positives = 45/91 (49%), Gaps = 4/91 (4%)

Query: 55  PAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRIT 114
           P WMSPE +    G+      D+WS A  + E+ T + P+A+   M    K+A +  +  
Sbjct: 173 PYWMSPEVIS---GEGYGRKADVWSVACTVVEMLTEKPPWAEYEAMAAIFKIATQPTKPM 229

Query: 115 IPPGISSHLSKLIRICMNEDPGKRPTFDMVL 145
           +P G+S      ++    E+  +RPT + +L
Sbjct: 230 LPDGVSDACRDFLKQIFVEEK-RRPTAEFLL 259

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 264

>gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

 Score = 43.1 bits (102), Expect = 1e-05
 Identities = 27/89 (30%), Positives = 45/89 (50%), Gaps = 4/89 (4%)

Query: 55  PAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADL-TPMEVGMKVALEGLRI 113
           PA+M+PE +    G  +  A D+WS   ++ E+AT + P+++L    ++   V   G + 
Sbjct: 167 PAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQIMFHVGA-GHKP 225

Query: 114 TIPP--GISSHLSKLIRICMNEDPGKRPT 140
            IP    +S      +  C+  DP KRPT
Sbjct: 226 PIPDSLQLSPEGKDFLDRCLESDPKKRPT 254

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264

>gnl|CDD|132974 cd06643, STKc_SLK, Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

 Score = 43.1 bits (101), Expect = 1e-05
 Identities = 29/94 (30%), Positives = 46/94 (48%), Gaps = 3/94 (3%)

Query: 55  PAWMSPEALQ-KKPGDRNLE-ACDMWSFAVLLWELATREVPFADLTPMEVGMKVA-LEGL 111
           P WM+PE +  +   DR  +   D+WS  + L E+A  E P  +L PM V +K+A  E  
Sbjct: 167 PYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPP 226

Query: 112 RITIPPGISSHLSKLIRICMNEDPGKRPTFDMVL 145
            +  P   SS     ++ C+ ++   R T   +L
Sbjct: 227 TLAQPSRWSSEFKDFLKKCLEKNVDARWTTTQLL 260

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. Length = 282

>gnl|CDD|173642 cd05075, PTKc_Axl, Catalytic domain of the Protein Tyrosine Kinase, Axl

 Score = 43.1 bits (101), Expect = 1e-05
 Identities = 30/96 (31%), Positives = 48/96 (50%), Gaps = 7/96 (7%)

Query: 57  WMSPEALQKKPGDRNLEA-CDMWSFAVLLWELATR-EVPFADLTPMEVGMKVALEGLRIT 114
           W++ E+L     DR      D+WSF V +WE+ATR + P+  +   E+      +G R+ 
Sbjct: 180 WIAIESL----ADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENSEI-YDYLRQGNRLK 234

Query: 115 IPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDK 150
            PP     L  L+  C   +P  RP+F+ +   L+K
Sbjct: 235 QPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCELEK 270

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transformed cells. Axl signaling is important in many cellular functions such as survival, anti-apoptosis, proliferation, migration, and adhesion. Axl was originally isolated from patients with chronic myelogenous leukemia and a chronic myeloproliferative disorder. Axl is overexpressed in many human cancers including colon, squamous cell, thyroid, breast, and lung carcinomas. Length = 272

>gnl|CDD|173764 cd08224, STKc_Nek6_Nek7, Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

 Score = 42.8 bits (101), Expect = 1e-05
 Identities = 34/106 (32%), Positives = 49/106 (46%), Gaps = 19/106 (17%)

Query: 55  PAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRIT 114
           P +MSPE + +   +      D+WS   LL+E+A  + PF        G K+ L  L   
Sbjct: 170 PYYMSPERIHENGYNF---KSDIWSLGCLLYEMAALQSPFY-------GDKMNLYSLCKK 219

Query: 115 I-----PPGISSHLSK----LIRICMNEDPGKRPTFDMVLPILDKM 151
           I     PP  + H S+    L+  C+N DP KRP    VL +  +M
Sbjct: 220 IEKCDYPPLPADHYSEELRDLVSRCINPDPEKRPDISYVLQVAKEM 265

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may also be regulators of the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|132988 cd06657, STKc_PAK4, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

 Score = 43.1 bits (101), Expect = 2e-05
 Identities = 32/136 (23%), Positives = 60/136 (44%), Gaps = 28/136 (20%)

Query: 23  FLFCCQIDEDLTARINMADAQFSFQQRGRCYYPAWMSPEALQKKPGDRNLEACDMWSFAV 82
           F FC Q+ +++  R ++               P WM+PE + + P    +   D+WS  +
Sbjct: 160 FGFCAQVSKEVPRRKSLVGT------------PYWMAPELISRLPYGPEV---DIWSLGI 204

Query: 83  LLWELATREVPFADLTPMEVGMKVALEGLRITIPP------GISSHLSKLIRICMNEDPG 136
           ++ E+   E P+ +  P++     A++ +R  +PP       +S  L   +   +  DP 
Sbjct: 205 MVIEMVDGEPPYFNEPPLK-----AMKMIRDNLPPKLKNLHKVSPSLKGFLDRLLVRDPA 259

Query: 137 KRPTFDMVL--PILDK 150
           +R T   +L  P L K
Sbjct: 260 QRATAAELLKHPFLAK 275

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell morphology and cytoskeletal organization. It is essential for embryonic viability and proper neural development. Mice lacking PAK4 die due to defects in the fetal heart. In addition, their spinal cord motor neurons showed failure to differentiate and migrate. PAK4 also plays a role in cell survival and tumorigenesis. It is overexpressed in many primary tumors including colon, esophageal, and mammary tumors. PAK4 has also been implicated in viral and bacterial infection pathways. Length = 292

>gnl|CDD|133228 cd05097, PTKc_DDR_like, Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

 Score = 43.0 bits (101), Expect = 2e-05
 Identities = 37/133 (27%), Positives = 64/133 (48%), Gaps = 18/133 (13%)

Query: 27  CQIDEDLTARI---NMADAQFS---FQQRGRCYYPA-WMSPEALQKKPGDRNLEACDMWS 79
           C +    T +I    M+   +S   ++ +GR   P  WM+ E++      +   A D+W+
Sbjct: 160 CLVGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILL---GKFTTASDVWA 216

Query: 80  FAVLLWELAT--REVPFADLTPMEV----GMKVALEGLRITI--PPGISSHLSKLIRICM 131
           F V LWE+ T  +E P++ L+  +V    G     +G +I +   P   S + KL+  C 
Sbjct: 217 FGVTLWEMFTLCKEQPYSLLSDEQVIENTGEFFRNQGRQIYLSQTPLCPSPVFKLMMRCW 276

Query: 132 NEDPGKRPTFDMV 144
           + D   RPTF+ +
Sbjct: 277 SRDIKDRPTFNKI 289

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 295

>gnl|CDD|133247 cd05116, PTKc_Syk, Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

 Score = 42.6 bits (100), Expect = 2e-05
 Identities = 25/105 (23%), Positives = 46/105 (43%), Gaps = 6/105 (5%)

Query: 46  FQQRGRCYYPA-WMSPEALQKKPGDRNLEACDMWSFAVLLWE-LATREVPFADLTPMEVG 103
           ++ +    +P  W +PE +      +     D+WSF VL+WE  +  + P+  +   EV 
Sbjct: 152 YKAKTHGKWPVKWYAPECMNYY---KFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEVT 208

Query: 104 MKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPIL 148
             +   G R+  P      +  L+++C      +RP F +V   L
Sbjct: 209 QMIE-SGERMECPQRCPPEMYDLMKLCWTYGVDERPGFAVVELRL 252

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. More recently, Syk expression has been detected in other cell types (including epithelial cells, vascular endothelial cells, neurons, hepatocytes, and melanocytes), suggesting a variety of biological functions in non-immune cells. Syk plays a critical role in maintaining vascular integrity and in wound healing during embryogenesis. It also regulates Vav3, which is important in osteoclast function including bone development. In breast epithelial cells, where Syk acts as a negative regulator for epidermal growth factor receptor (EGFR) signaling, loss of Syk expression is associated with abnormal proliferation during cancer development suggesting a potential role as a tumor suppressor. In mice, Syk has been shown to inhibit malignant transformation of mammary epithelial cells induced with murine mammary tumor virus (MMTV). Length = 257

>gnl|CDD|173676 cd05585, STKc_YPK1_like, Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

 Score = 42.6 bits (100), Expect = 2e-05
 Identities = 31/103 (30%), Positives = 47/103 (45%), Gaps = 8/103 (7%)

Query: 36  RINMADAQFSFQQRGRCYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFA 95
           ++NM D     +    C  P +++PE L    G    +A D W+  VLL+E+ T   PF 
Sbjct: 141 KLNMKDDD---KTNTFCGTPEYLAPELLL---GHGYTKAVDWWTLGVLLYEMLTGLPPFY 194

Query: 96  DLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKR 138
           D    E+  K+  E LR   P G       L+   ++ DP +R
Sbjct: 195 DENVNEMYRKILQEPLR--FPDGFDRDAKDLLIGLLSRDPTRR 235

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It plays a role in cell growth and sexual development. Length = 312

>gnl|CDD|132982 cd06651, STKc_MEKK3, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

 Score = 42.7 bits (100), Expect = 2e-05
 Identities = 25/91 (27%), Positives = 42/91 (46%), Gaps = 4/91 (4%)

Query: 55  PAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRIT 114
           P WMSPE +    G+      D+WS    + E+ T + P+A+   M    K+A +     
Sbjct: 173 PYWMSPEVIS---GEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMAAIFKIATQPTNPQ 229

Query: 115 IPPGISSHLSKLIRICMNEDPGKRPTFDMVL 145
           +P  IS H    +  C+  +   RP+ + +L
Sbjct: 230 LPSHISEHARDFLG-CIFVEARHRPSAEELL 259

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. In addition, MEKK3 is involved in interleukin-1 receptor and Toll-like receptor 4 signaling. It is also a specific regulator of the proinflammatory cytokines IL-6 and GM-CSF in some immune cells. MEKK3 also regulates calcineurin, which plays a critical role in T cell activation, apoptosis, skeletal myocyte differentiation, and cardiac hypertrophy. Length = 266

>gnl|CDD|133211 cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

 Score = 42.6 bits (100), Expect = 2e-05
 Identities = 31/109 (28%), Positives = 49/109 (44%), Gaps = 17/109 (15%)

Query: 57  WMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFAD--------LTPMEVGMKVA- 107
           W + E L++   ++   A D+WSF V L+EL T               + P +  M V  
Sbjct: 176 WYAVECLKE---NKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVR 232

Query: 108 ----LE-GLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKM 151
               LE G+R+  P      +  L++ C   +   RPTF  ++PIL +M
Sbjct: 233 LIELLERGMRLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEM 281

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 283

>gnl|CDD|173653 cd05105, PTKc_PDGFR_alpha, Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

 Score = 42.7 bits (100), Expect = 3e-05
 Identities = 30/111 (27%), Positives = 52/111 (46%), Gaps = 11/111 (9%)

Query: 35  ARINMADAQFSFQQRGRCYYPA-WMSPEALQKKPGDRNLEAC--DMWSFAVLLWEL-ATR 90
           AR  M D+  ++  +G  + P  WM+PE++       NL     D+WS+ +LLWE+ +  
Sbjct: 284 ARDIMHDS--NYVSKGSTFLPVKWMAPESIFD-----NLYTTLSDVWSYGILLWEIFSLG 336

Query: 91  EVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTF 141
             P+  +            G R+  P   +  +  ++  C N +P KRP+F
Sbjct: 337 GTPYPGMIVDSTFYNKIKSGYRMAKPDHATQEVYDIMVKCWNSEPEKRPSF 387

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-AB, and PDGF-CC induce PDGFR alpha homodimerization. PDGFR signaling plays many roles in normal embryonic development and adult physiology. PDGFR alpha signaling is important in the formation of lung alveoli, intestinal villi, mesenchymal dermis, and hair follicles, as well as in the development of oligodendrocytes, retinal astrocytes, neural crest cells, and testicular cells. Aberrant PDGFR alpha expression is associated with some human cancers. Mutations in PDGFR alpha have been found within a subset of gastrointestinal stromal tumors (GISTs). An active fusion protein FIP1L1-PDGFR alpha, derived from interstitial deletion, is associated with idiopathic hypereosinophilic syndrome (HES) and chronic eosinophilic leukemia (CEL). Length = 400

>gnl|CDD|133207 cd05076, PTK_Tyk2_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

 Score = 42.2 bits (99), Expect = 3e-05
 Identities = 30/91 (32%), Positives = 44/91 (48%), Gaps = 8/91 (8%)

Query: 57  WMSPEALQKKPGDRNLE-ACDMWSFAVLLWELA-TREVPFADLTPMEVGMKVALEGLRIT 114
           W++PE +   PG  +L  A D WSF   L E+    EVP  + TP E   K      +  
Sbjct: 186 WIAPECV---PGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSE---KERFYEKKHR 239

Query: 115 IPPGISSHLSKLIRICMNEDPGKRPTFDMVL 145
           +P      L+ LI  C+  +P +RP+F  +L
Sbjct: 240 LPEPSCKELATLISQCLTYEPTQRPSFRTIL 270

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 274

>gnl|CDD|173765 cd08225, STKc_Nek5, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

 Score = 42.3 bits (99), Expect = 3e-05
 Identities = 27/91 (29%), Positives = 42/91 (46%), Gaps = 4/91 (4%)

Query: 55  PAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRIT 114
           P ++SPE  Q +P +      D+WS   +L+EL T + PF      ++ +K+  +G    
Sbjct: 166 PYYLSPEICQNRPYNNK---TDIWSLGCVLYELCTLKHPFEGNNLHQLVLKIC-QGYFAP 221

Query: 115 IPPGISSHLSKLIRICMNEDPGKRPTFDMVL 145
           I P  S  L  LI       P  RP+   +L
Sbjct: 222 ISPNFSRDLRSLISQLFKVSPRDRPSITSIL 252

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. Length = 257

>gnl|CDD|133179 cd05048, PTKc_Ror, Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

 Score = 42.4 bits (100), Expect = 3e-05
 Identities = 29/90 (32%), Positives = 45/90 (50%), Gaps = 13/90 (14%)

Query: 57  WMSPEALQKKPGDRNLEACDMWSFAVLLWELATREV-PFADLTPMEVGMKVALEGLR--- 112
           WM PEA+    G    E+ D+WSF V+LWE+ +  + P+   +  EV     +E +R   
Sbjct: 192 WMPPEAILY--GKFTTES-DIWSFGVVLWEIFSYGLQPYYGFSNQEV-----IEMIRSRQ 243

Query: 113 -ITIPPGISSHLSKLIRICMNEDPGKRPTF 141
            +  P    + +  L+  C NE P +RP F
Sbjct: 244 LLPCPEDCPARVYALMIECWNEIPARRPRF 273

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. They play important roles in bone and heart formation. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Drosophila Ror is expressed only in the developing nervous system during neurite outgrowth and neuronal differentiation, suggesting a role for Drosophila Ror in neural development. More recently, mouse Ror1 and Ror2 have also been found to play an important role in regulating neurite growth in central neurons. Ror1 and Ror2 are believed to have some overlapping and redundant functions. Length = 283

>gnl|CDD|173636 cd05057, PTKc_EGFR_like, Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

 Score = 42.4 bits (100), Expect = 3e-05
 Identities = 28/99 (28%), Positives = 46/99 (46%), Gaps = 7/99 (7%)

Query: 57  WMSPEALQKKPGDRNLEACDMWSFAVLLWELAT-REVPFADLTPMEVGMKVALE-GLRIT 114
           WM+ E++  +         D+WS+ V +WEL T    P+  +  +E+     LE G R+ 
Sbjct: 177 WMALESILHR---IYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVEI--PDLLEKGERLP 231

Query: 115 IPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKMKR 153
            PP  +  +  ++  C   D   RPTF  ++    KM R
Sbjct: 232 QPPICTIDVYMVLVKCWMIDAESRPTFKELINEFSKMAR 270

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, resulting in the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Collectively, they can recognize a variety of ligands including EGF, TGFalpha, and neuregulins, among others. All four subfamily members can form homo- or heterodimers. HER3 contains an impaired kinase domain and depends on its heterodimerization partner for activation. EGFR subfamily members are involved in signaling pathways leading to a broad range of cellular responses including cell proliferation, differentiation, migration, growth inhibition, and apoptosis. Gain of function alterations, through their overexpression, deletions, or point mutations in their kinase domains, have been implicated in various cancers. These receptors are targets of many small molecule inhibitors and monoclonal antibodies used in cancer therapy. Length = 279

>gnl|CDD|165291 PHA02988, PHA02988, hypothetical protein; Provisional

 Score = 42.0 bits (99), Expect = 3e-05
 Identities = 19/70 (27%), Positives = 36/70 (51%)

Query: 76  DMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDP 135
           D++S  V+LWE+ T ++PF +LT  E+   +  +   + +P      +  ++  C + D 
Sbjct: 204 DIYSLGVVLWEIFTGKIPFENLTTKEIYDLIINKNNSLKLPLDCPLEIKCIVEACTSHDS 263

Query: 136 GKRPTFDMVL 145
            KRP    +L
Sbjct: 264 IKRPNIKEIL 273

Length = 283

>gnl|CDD|173714 cd05625, STKc_LATS1, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

 Score = 42.3 bits (99), Expect = 3e-05
 Identities = 29/83 (34%), Positives = 43/83 (51%), Gaps = 6/83 (7%)

Query: 55  PAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRIT 114
           P +++PE L +  G   L  CD WS  V+L+E+   + PF   TP+E  MKV      + 
Sbjct: 212 PNYIAPEVLLRT-GYTQL--CDWWSVGVILYEMLVGQPPFLAQTPLETQMKVINWQTSLH 268

Query: 115 IPP--GISSHLSKLI-RICMNED 134
           IPP   +S   S LI ++C   +
Sbjct: 269 IPPQAKLSPEASDLIIKLCRGPE 291

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype and poor prognosis. LATS1 induces G2 arrest and promotes cytokinesis. It may be a component of the mitotic exit network in higher eukaryotes. Length = 382

>gnl|CDD|132953 cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

 Score = 41.8 bits (98), Expect = 4e-05
 Identities = 27/105 (25%), Positives = 50/105 (47%), Gaps = 7/105 (6%)

Query: 56  AWMSPEALQKKPGDRNLE---ACDMWSFAVLLWELATREVPFADLTPMEV--GMKVALEG 110
           ++M+PE ++    ++N       D+WS  + + E+A    P+   T   +   +   ++G
Sbjct: 166 SYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIFAQLSAIVDG 225

Query: 111 LRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVL--PILDKMKR 153
              T+P G S      +  C+N+ P +RPT+  +L  P L K K 
Sbjct: 226 DPPTLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLEHPWLVKYKN 270

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Polymyxin B resistance protein 2 (PBS2) from Saccharomyces cerevisiae, Wis1 from Schizosaccharomyces pombe, and related proteins. PBS2 and Wis1 are components of stress-activated MAPK cascades in budding and fission yeast, respectively. PBS2 is the specific activator of the MAPK Hog1, which plays a central role in the response of budding yeast to stress including exposure to arsenite and hyperosmotic environments. Wis1 phosphorylates and activates the MAPK Sty1 (also called Spc1 or Phh1), which stimulates a transcriptional response to a wide range of cellular insults through the bZip transcription factors Atf1, Pcr1, and Pap1. Length = 286

>gnl|CDD|173703 cd05612, STKc_PRKX_like, Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

 Score = 41.7 bits (98), Expect = 4e-05
 Identities = 28/106 (26%), Positives = 51/106 (48%), Gaps = 9/106 (8%)

Query: 37  INMADAQFSFQQRGR----CYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREV 92
           I + D  F+ + R R    C  P +++PE +Q K  ++   A D W+  +L++E+     
Sbjct: 140 IKLTDFGFAKKLRDRTWTLCGTPEYLAPEVIQSKGHNK---AVDWWALGILIYEMLVGYP 196

Query: 93  PFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKR 138
           PF D  P  +  K+ L G ++  P  +  +   LI+  +  D  +R
Sbjct: 197 PFFDDNPFGIYEKI-LAG-KLEFPRHLDLYAKDLIKKLLVVDRTRR 240

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyte/macrophage lineage differentiation, renal cell epithelial migration, and tubular morphogenesis in the developing kidney. Length = 291

>gnl|CDD|132965 cd06634, STKc_TAO2, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

 Score = 41.6 bits (97), Expect = 4e-05
 Identities = 22/91 (24%), Positives = 38/91 (41%)

Query: 55  PAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRIT 114
           P WM+PE +      +     D+WS  +   ELA R+ P  ++  M     +A       
Sbjct: 175 PYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPAL 234

Query: 115 IPPGISSHLSKLIRICMNEDPGKRPTFDMVL 145
                S +    +  C+ + P  RPT +++L
Sbjct: 235 QSGHWSEYFRNFVDSCLQKIPQDRPTSEVLL 265

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. TAO2 contains a long C-terminal extension with autoinhibitory segments. It is activated by the release of this inhibition and the phosphorylation of its activation loop serine. TAO2 functions as a regulator of actin cytoskeletal and microtubule organization. In addition, it regulates the transforming growth factor-activated kinase 1 (TAK1), which is a MAPKKK that plays an essential role in the signaling pathways of tumor necrosis factor (TNF), interleukin 1 (IL-1), and Toll-like receptor (TLR). Length = 308

>gnl|CDD|133237 cd05106, PTKc_CSF-1R, Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

 Score = 41.8 bits (98), Expect = 4e-05
 Identities = 23/102 (22%), Positives = 49/102 (48%), Gaps = 16/102 (15%)

Query: 57  WMSPEALQKKPGDRNLEAC------DMWSFAVLLWEL-ATREVPFADLTPMEVGMKVALE 109
           WM+PE++           C      D+WS+ +LLWE+ +  + P+  +       K+   
Sbjct: 280 WMAPESIFD---------CVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSKFYKMVKR 330

Query: 110 GLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKM 151
           G +++ P      +  ++++C N +P +RPTF  +  ++ + 
Sbjct: 331 GYQMSRPDFAPPEIYSIMKMCWNLEPTERPTFSQISQLIQRQ 372

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. It leads to increases in gene transcription and protein translation, and induces cytoskeletal remodeling. CSF-1R signaling leads to a variety of cellular responses including survival, proliferation, and differentiation of target cells. It plays an important role in innate immunity, tissue development and function, and the pathogenesis of some diseases including atherosclerosis and cancer. CSF-1R signaling is also implicated in mammary gland development during pregnancy and lactation. Aberrant CSF-1/CSF-1R expression correlates with tumor cell invasiveness, poor clinical prognosis, and bone metastasis in breast cancer. Although the structure of the human CSF-1R catalytic domain is known, it is excluded from this specific alignment model because it contains a deletion in its sequence. Length = 374

>gnl|CDD|173760 cd08220, STKc_Nek8, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

 Score = 41.4 bits (97), Expect = 6e-05
 Identities = 26/91 (28%), Positives = 45/91 (49%), Gaps = 4/91 (4%)

Query: 55  PAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRIT 114
           P ++SPE  + KP +   +  D+W+   +L+ELA+ +  F       + +K+ + G    
Sbjct: 165 PCYISPELCEGKPYN---QKSDIWALGCVLYELASLKRAFEAANLPALVLKI-MSGTFAP 220

Query: 115 IPPGISSHLSKLIRICMNEDPGKRPTFDMVL 145
           I    S  L +LI   +N DP KRP    ++
Sbjct: 221 ISDRYSPDLRQLILSMLNLDPSKRPQLSQIM 251

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with a rare form of juvenile renal cystic disease, nephronophthisis type 9. It has been suggested that a defect in the ciliary localization of Nek8 contributes to the development of cysts manifested by these diseases. Length = 256

>gnl|CDD|133212 cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

 Score = 41.3 bits (97), Expect = 7e-05
 Identities = 29/111 (26%), Positives = 50/111 (45%), Gaps = 18/111 (16%)

Query: 57  WMSPEALQKKPGDRNLEACDMWSFAVLLWELAT-------------REVPFADLTPMEVG 103
           W +PE+L +        A D+WSF V+L+EL T             R +       M V 
Sbjct: 177 WYAPESLTESKFSV---ASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVY 233

Query: 104 MKVAL--EGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKMK 152
             + L     R+  PPG  + +  +++ C N DP +RP+F  +   ++ ++
Sbjct: 234 HLIELLKNNGRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAIR 284

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 284

>gnl|CDD|173635 cd05054, PTKc_VEGFR, Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

 Score = 41.4 bits (97), Expect = 7e-05
 Identities = 28/93 (30%), Positives = 46/93 (49%), Gaps = 4/93 (4%)

Query: 57  WMSPEALQKKPGDRNLEACDMWSFAVLLWELATR-EVPFADLTPMEVGMKVALEGLRITI 115
           WM+PE++  K         D+WSF VLLWE+ +    P+  +   E   +   EG R+  
Sbjct: 241 WMAPESIFDKVYTTQ---SDVWSFGVLLWEIFSLGASPYPGVQIDEEFCRRLKEGTRMRA 297

Query: 116 PPGISSHLSKLIRICMNEDPGKRPTFDMVLPIL 148
           P   +  +  ++  C + +P  RPTF  ++ IL
Sbjct: 298 PEYATPEIYSIMLDCWHNNPEDRPTFSELVEIL 330

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. There are five VEGF ligands in mammals, which bind, in an overlapping pattern to the three VEGFRs, which can form homo or heterodimers. VEGFRs regulate the cardiovascular system. They are critical for vascular development during embryogenesis and blood vessel formation in adults. They induce cellular functions common to other growth factor receptors such as cell migration, survival, and proliferation. VEGFR1 binds VEGFA, VEGFB, and placenta growth factor (PLGF). It regulates monocyte and macrophage migration, vascular permeability, haematopoiesis, and the recruitment of haematopietic progenitor cells from the bone marrow. Length = 337

>gnl|CDD|133180 cd05049, PTKc_Trk, Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

 Score = 40.9 bits (96), Expect = 7e-05
 Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 5/95 (5%)

Query: 57  WMSPEALQKKPGDRNLEACDMWSFAVLLWELATR-EVPFADLTPMEVGMKVALEGLRITI 115
           WM PE++         E+ D+WSF V+LWE+ T  + P+  L+  EV ++   +G  +  
Sbjct: 190 WMPPESI--MYRKFTTES-DVWSFGVVLWEIFTYGKQPWYGLSNEEV-IECITQGRLLQR 245

Query: 116 PPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDK 150
           P    S +  ++  C   DP +R     +   L K
Sbjct: 246 PRTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQK 280

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalytic domain. Trk receptors are mainly expressed in the peripheral and central nervous systems. They play important roles in cell fate determination, neuronal survival and differentiation, as well as in the regulation of synaptic plasticity. Altered expression of Trk receptors is associated with many human diseases. Length = 280

>gnl|CDD|132985 cd06654, STKc_PAK1, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

 Score = 40.9 bits (95), Expect = 8e-05
 Identities = 28/117 (23%), Positives = 48/117 (41%), Gaps = 16/117 (13%)

Query: 23  FLFCCQIDEDLTARINMADAQFSFQQRGRCYYPAWMSPEALQKKPGDRNLEACDMWSFAV 82
           F FC QI  + + R  M               P WM+PE + +K     +   D+WS  +
Sbjct: 160 FGFCAQITPEQSKRSTMVGT------------PYWMAPEVVTRKAYGPKV---DIWSLGI 204

Query: 83  LLWELATREVPFADLTPMEVGMKVALEGL-RITIPPGISSHLSKLIRICMNEDPGKR 138
           +  E+   E P+ +  P+     +A  G   +  P  +S+     +  C++ D  KR
Sbjct: 205 MAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKR 261

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK1 is important in the regulation of many cellular processes including cytoskeletal dynamics, cell motility, growth, and proliferation. Although PAK1 has been regarded mainly as a cytosolic protein, recent reports indicate that PAK1 also exists in significant amounts in the nucleus, where it is involved in transcription modulation and in cell cycle regulatory events. PAK1 is also involved in transformation and tumorigenesis. Its overexpression, hyperactivation and increased nuclear accumulation is correlated to breast cancer invasiveness and progression. Nuclear accumulation is also linked to tamoxifen resistance in breast cancer cells. Length = 296

>gnl|CDD|133204 cd05073, PTKc_Hck, Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

 Score = 40.8 bits (95), Expect = 9e-05
 Identities = 34/127 (26%), Positives = 65/127 (51%), Gaps = 7/127 (5%)

Query: 24  LFCCQIDEDLTARINMADAQFSFQQRGRCYYPAWMSPEALQKKPGDRNLEACDMWSFAVL 83
              C+I +   AR+ + D +++ ++ G  +   W +PEA+    G   +++ D+WSF +L
Sbjct: 138 SLVCKIADFGLARV-IEDNEYTARE-GAKFPIKWTAPEAINF--GSFTIKS-DVWSFGIL 192

Query: 84  LWELATR-EVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFD 142
           L E+ T   +P+  ++  EV ++    G R+  P      L  ++  C    P +RPTF+
Sbjct: 193 LMEIVTYGRIPYPGMSNPEV-IRALERGYRMPRPENCPEELYNIMMRCWKNRPEERPTFE 251

Query: 143 MVLPILD 149
            +  +LD
Sbjct: 252 YIQSVLD 258

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Hck is present in myeloid and lymphoid cells that play a role in the development of cancer. It may be important in the oncogenic signaling of the protein Tel-Abl, which induces a chronic myelogenous leukemia (CML)-like disease. Hck also acts as a negative regulator of granulocyte colony-stimulating factor (G-CSF)-induced proliferation of granulocytic precursors, suggesting a possible role in the development of acute myeloid leukemia (AML). In addition, Hck is essential in regulating the degranulation of polymorphonuclear leukocytes (PMNs). Genetic polymorphisms affect the expression level of Hck, which affects PMN mediator release and influences the development of chronic obstructive pulmonary disease (COPD). Length = 260

>gnl|CDD|132970 cd06639, STKc_myosinIIIB, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

 Score = 40.8 bits (95), Expect = 1e-04
 Identities = 26/100 (26%), Positives = 44/100 (44%), Gaps = 15/100 (15%)

Query: 55  PAWMSPEALQ-KKPGDRNLEA-CDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLR 112
           P WM+PE +  ++  D + +A CD+WS  +   EL   + P  D+ P++   K+      
Sbjct: 192 PFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKTLFKIPRN--- 248

Query: 113 ITIPPGISSH-------LSKLIRICMNEDPGKRPTFDMVL 145
              PP    H        +  I  C+ +D   RP+   +L
Sbjct: 249 ---PPPTLLHPEKWCRSFNHFISQCLIKDFEARPSVTHLL 285

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also present in the brain and testis. The human class IIIB myosin gene maps to a region that overlaps the locus for Bardet-Biedl syndrome, which is characterized by dysmorphic extremities, retinal dystrophy, obesity, male hypogenitalism, and renal abnormalities. Length = 291

>gnl|CDD|173702 cd05611, STKc_Rim15_like, Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

 Score = 40.5 bits (95), Expect = 1e-04
 Identities = 23/88 (26%), Positives = 33/88 (37%), Gaps = 9/88 (10%)

Query: 55  PAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRIT 114
           P +++PE +     D   +  D WS   +++E      PF   TP  V   +     RI 
Sbjct: 157 PDYLAPETILGVGDD---KMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDNI--LSRRIN 211

Query: 115 IP----PGISSHLSKLIRICMNEDPGKR 138
            P       S     LI   +  DP KR
Sbjct: 212 WPEEVKEFCSPEAVDLINRLLCMDPAKR 239

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a downstream effector of PKA and regulates entry into stationary phase (G0). Thus, it plays a crucial role in regulating yeast proliferation, differentiation, and aging. Cek1 may facilitate progression of mitotic anaphase. Length = 260

>gnl|CDD|133221 cd05090, PTKc_Ror1, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

 Score = 40.4 bits (94), Expect = 1e-04
 Identities = 24/86 (27%), Positives = 43/86 (50%), Gaps = 5/86 (5%)

Query: 57  WMSPEALQKKPGDRNLEACDMWSFAVLLWELATREV-PFADLTPMEVGMKVALEGLRITI 115
           WM PEA+    G  + ++ D+WSF V+LWE+ +  + P+   +  EV +++  +   +  
Sbjct: 192 WMPPEAIMY--GKFSSDS-DIWSFGVVLWEIFSFGLQPYYGFSNQEV-IEMVRKRQLLPC 247

Query: 116 PPGISSHLSKLIRICMNEDPGKRPTF 141
                  +  L+  C  E P +RP F
Sbjct: 248 SEDCPPRMYSLMTECWQEGPSRRPRF 273

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. Avian Ror1 was found to be involved in late limb development. Studies in mice reveal that Ror1 is important in the regulation of neurite growth in central neurons, as well as in respiratory development. Loss of Ror1 also enhances the heart and skeletal abnormalities found in Ror2-deficient mice. Length = 283

>gnl|CDD|173715 cd05626, STKc_LATS2, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

 Score = 40.4 bits (94), Expect = 1e-04
 Identities = 28/83 (33%), Positives = 41/83 (49%), Gaps = 9/83 (10%)

Query: 43  QFSFQQRGRCY------YPAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFAD 96
           Q + +Q  RC        P +++PE L +K G   L  CD WS  V+L+E+   + PF  
Sbjct: 194 QRATKQHQRCLAHSLVGTPNYIAPEVLLRK-GYTQL--CDWWSVGVILFEMLVGQPPFLA 250

Query: 97  LTPMEVGMKVALEGLRITIPPGI 119
            TP E  +KV      + IPP +
Sbjct: 251 PTPTETQLKVINWENTLHIPPQV 273

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with poor prognosis in acute lymphoblastic leukemia and breast cancer. Length = 381

>gnl|CDD|173763 cd08223, STKc_Nek4, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

 Score = 40.0 bits (93), Expect = 2e-04
 Identities = 26/91 (28%), Positives = 44/91 (48%), Gaps = 4/91 (4%)

Query: 55  PAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRIT 114
           P +MSPE    KP +      D+W+    ++E+AT +  F +   M   +   +EG    
Sbjct: 166 PYYMSPELFSNKPYNYK---SDVWALGCCVYEMATLKHAF-NAKDMNSLVYRIIEGKLPP 221

Query: 115 IPPGISSHLSKLIRICMNEDPGKRPTFDMVL 145
           +P   S  L +LI   +++ P KRP+   +L
Sbjct: 222 MPKDYSPELGELIATMLSKRPEKRPSVKSIL 252

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. Length = 257

>gnl|CDD|132987 cd06656, STKc_PAK3, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

 Score = 39.7 bits (92), Expect = 2e-04
 Identities = 27/117 (23%), Positives = 47/117 (40%), Gaps = 16/117 (13%)

Query: 23  FLFCCQIDEDLTARINMADAQFSFQQRGRCYYPAWMSPEALQKKPGDRNLEACDMWSFAV 82
           F FC QI  + + R  M               P WM+PE + +K     +   D+WS  +
Sbjct: 159 FGFCAQITPEQSKRSTMVGT------------PYWMAPEVVTRKAYGPKV---DIWSLGI 203

Query: 83  LLWELATREVPFADLTPMEVGMKVALEGL-RITIPPGISSHLSKLIRICMNEDPGKR 138
           +  E+   E P+ +  P+     +A  G   +  P  +S+     +  C+  D  +R
Sbjct: 204 MAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPERLSAVFRDFLNRCLEMDVDRR 260

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK3 is highly expressed in the brain. It is implicated in neuronal plasticity, synapse formation, dendritic spine morphogenesis, cell cycle progression, neuronal migration, and apoptosis. Inactivating mutations in the PAK3 gene cause X-linked non-syndromic mental retardation, the severity of which depends on the site of the mutation. Length = 297

>gnl|CDD|173648 cd05092, PTKc_TrkA, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

 Score = 39.6 bits (92), Expect = 2e-04
 Identities = 29/120 (24%), Positives = 56/120 (46%), Gaps = 12/120 (10%)

Query: 27  CQIDEDLTARIN---MADAQFS---FQQRGRCYYPA-WMSPEALQKKPGDRNLEACDMWS 79
           C + + L  +I    M+   +S   ++  GR   P  WM PE++  +   +     D+WS
Sbjct: 153 CLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYR---KFTTESDIWS 209

Query: 80  FAVLLWELATR-EVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKR 138
           F V+LWE+ T  + P+  L+  E  ++   +G  +  P      +  +++ C   +P +R
Sbjct: 210 FGVVLWEIFTYGKQPWYQLSNTE-AIECITQGRELERPRTCPPEVYAIMQGCWQREPQQR 268

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory and sympathetic neurons of the peripheral nervous system, and in basal forebrain cholinergic neurons of the central nervous system. It is critical for neuronal growth, differentiation and survival. Alternative TrkA splicing has been implicated as a pivotal regulator of neuroblastoma (NB) behavior. Normal TrkA expression is associated with better NB prognosis, while the hypoxia-regulated TrkAIII splice variant promotes NB pathogenesis and progression. Aberrant TrkA expression has also been demonstrated in non-neural tumors including prostate, breast, lung, and pancreatic cancers. Length = 280

>gnl|CDD|132986 cd06655, STKc_PAK2, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

 Score = 39.7 bits (92), Expect = 2e-04
 Identities = 28/117 (23%), Positives = 46/117 (39%), Gaps = 16/117 (13%)

Query: 23  FLFCCQIDEDLTARINMADAQFSFQQRGRCYYPAWMSPEALQKKPGDRNLEACDMWSFAV 82
           F FC QI  + + R  M               P WM+PE + +K     +   D+WS  +
Sbjct: 159 FGFCAQITPEQSKRSTMVGT------------PYWMAPEVVTRKAYGPKV---DIWSLGI 203

Query: 83  LLWELATREVPFADLTPMEVGMKVALEGL-RITIPPGISSHLSKLIRICMNEDPGKR 138
           +  E+   E P+ +  P+     +A  G   +  P  +S      +  C+  D  KR
Sbjct: 204 MAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPEKLSPIFRDFLNRCLEMDVEKR 260

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK2 plays a role in pro-apoptotic signaling. It is cleaved and activated by caspases leading to morphological changes during apoptosis. PAK2 is also activated in response to a variety of stresses including DNA damage, hyperosmolarity, serum starvation, and contact inhibition, and may play a role in coordinating the stress response. PAK2 also contributes to cancer cell invasion through a mechanism distinct from that of PAK1. Length = 296

>gnl|CDD|132966 cd06635, STKc_TAO1, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

 Score = 39.3 bits (91), Expect = 3e-04
 Identities = 22/91 (24%), Positives = 37/91 (40%)

Query: 55  PAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRIT 114
           P WM+PE +      +     D+WS  +   ELA R+ P  ++  M     +A       
Sbjct: 185 PYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPTL 244

Query: 115 IPPGISSHLSKLIRICMNEDPGKRPTFDMVL 145
                S +    +  C+ + P  RPT + +L
Sbjct: 245 QSNEWSDYFRNFVDSCLQKIPQDRPTSEELL 275

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuronal apoptosis. TAO1 interacts with the checkpoint proteins BubR1 and Mad2, and plays an important role in regulating mitotic progression, which is required for both chromosome congression and checkpoint-induced anaphase delay. TAO1 may play a role in protecting genomic stability. Length = 317

>gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

 Score = 38.8 bits (91), Expect = 4e-04
 Identities = 26/100 (26%), Positives = 50/100 (50%), Gaps = 18/100 (18%)

Query: 56  AWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFA--DLTPMEVGMKVALEGLRI 113
           ++M+PE +Q    D ++++ D+WS  + L ELAT   P+   +  P  +      E L+ 
Sbjct: 164 SYMAPERIQ--GNDYSVKS-DIWSLGLSLIELATGRFPYPPENDPPDGI-----FELLQY 215

Query: 114 TI---PPGISSH-----LSKLIRICMNEDPGKRPTFDMVL 145
            +   PP + S          + +C+ +DP +RP++  +L
Sbjct: 216 IVNEPPPRLPSGKFSPDFQDFVNLCLIKDPRERPSYKELL 255

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265

>gnl|CDD|132961 cd06630, STKc_MEKK1, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

 Score = 39.1 bits (91), Expect = 4e-04
 Identities = 33/114 (28%), Positives = 51/114 (44%), Gaps = 18/114 (15%)

Query: 33  LTARINMADAQFSFQQRGRCYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREV 92
           L A+   A  +F  Q  G     A+M+PE L+ +   R   +CD+WS   ++ E+AT + 
Sbjct: 154 LAAKGTGAG-EFQGQLLGTI---AFMAPEVLRGEQYGR---SCDVWSVGCVIIEMATAKP 206

Query: 93  PF---ADLTPMEVGMKVALEGLRITIPPGISSHLSKLIR----ICMNEDPGKRP 139
           P+        + +  K+A      T  P I  HLS  +R     C+   P  RP
Sbjct: 207 PWNAEKHSNHLALIFKIA----SATTAPSIPEHLSPGLRDVTLRCLELQPEDRP 256

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their respective MAPKKs, MEK1/2 and MKK4/MKK7, respectively. MEKK1 is important in regulating cell survival and apoptosis. MEKK1 also plays a role in cell migration, tissue maintenance and homeostasis, and wound healing. Length = 268

>gnl|CDD|173705 cd05614, STKc_MSK2_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

 Score = 38.8 bits (90), Expect = 4e-04
 Identities = 27/97 (27%), Positives = 43/97 (44%), Gaps = 9/97 (9%)

Query: 44  FSFQQRGRCYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVG 103
           +SF     C    +M+PE ++ K G  + +A D WS  +L++EL T   PF         
Sbjct: 164 YSF-----CGTIEYMAPEIIRGKGG--HGKAVDWWSLGILIFELLTGASPFTLEGERNTQ 216

Query: 104 MKVALEGLRIT--IPPGISSHLSKLIRICMNEDPGKR 138
            +V+   L+     P  I      L+   + +DP KR
Sbjct: 217 SEVSRRILKCDPPFPSFIGPEAQDLLHKLLRKDPKKR 253

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK2 and MSK1 play nonredundant roles in activating histone H3 kinases, which play pivotal roles in compaction of the chromatin fiber. MSK2 is the required H3 kinase in response to stress stimuli and activation of the p38 MAPK pathway. MSK2 also plays a role in the pathogenesis of psoriasis. Length = 332

>gnl|CDD|173766 cd08226, PK_STRAD_beta, Pseudokinase domain of STE20-related kinase adapter protein beta

 Score = 38.8 bits (90), Expect = 4e-04
 Identities = 33/146 (22%), Positives = 54/146 (36%), Gaps = 47/146 (32%)

Query: 40  ADAQFSFQQRGRCYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADL-- 97
           A   + F Q      P W+SPE L++     N+++ D++S  +   ELAT  VPF D+  
Sbjct: 158 AKVVYDFPQFSTSVLP-WLSPELLRQDLYGYNVKS-DIYSVGITACELATGRVPFQDMLR 215

Query: 98  -------------------------TPME---------VGMKVALEGLRITI-------- 115
                                    + M+         +G  V   G+  T+        
Sbjct: 216 TQMLLQKLKGPPYSPLDITTFPCEESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTP 275

Query: 116 -PPGISSHLSKLIRICMNEDPGKRPT 140
                S     L+ +C+ +DP KRP+
Sbjct: 276 SSKTFSPAFQNLVELCLQQDPEKRPS 301

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buccal mucosa. There are two forms of STRAD, alpha and beta, that complex with LKB1 and MO25. STRAD-beta is also referred to as ALS2CR2 (Amyotrophic lateral sclerosis 2 chromosomal region candidate gene 2 protein), since the human gene encoding it is located within the juvenile ALS2 critical region on chromosome 2q33-q34. It is not linked to the development of ALS2. Length = 328

>gnl|CDD|173654 cd05108, PTKc_EGFR, Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

 Score = 38.8 bits (90), Expect = 4e-04
 Identities = 25/97 (25%), Positives = 41/97 (42%), Gaps = 3/97 (3%)

Query: 57  WMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIP 116
           WM+ E++  +         D+WS+ V +WEL T      D  P      +  +G R+  P
Sbjct: 177 WMALESILHRI---YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQP 233

Query: 117 PGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKMKR 153
           P  +  +  ++  C   D   RP F  ++    KM R
Sbjct: 234 PICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 270

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands for EGFR include EGF, heparin binding EGF-like growth factor (HBEGF), epiregulin, amphiregulin, TGFalpha, and betacellulin. Upon ligand binding, EGFR can form homo- or heterodimers with other EGFR subfamily members. The EGFR signaling pathway is one of the most important pathways regulating cell proliferation, differentiation, survival, and growth. Overexpression and mutation in the kinase domain of EGFR have been implicated in the development and progression of a variety of cancers. A number of monoclonal antibodies and small molecule inhibitors have been developed that target EGFR, including the antibodies Cetuximab and Panitumumab, which are used in combination with other therapies for the treatment of colorectal cancer and non-small cell lung carcinoma (NSCLC). The small molecule inhibitors Gefitinib (Iressa) and Erlotinib (Tarceva), already used for NSCLC, are undergoing clinical trials for other types of cancer including gastrointestinal, breast, head and neck, and bladder. Length = 316

>gnl|CDD|133227 cd05096, PTKc_DDR1, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

 Score = 38.8 bits (90), Expect = 4e-04
 Identities = 39/133 (29%), Positives = 63/133 (47%), Gaps = 24/133 (18%)

Query: 27  CQIDEDLTARINMADAQFS--------FQQRGRCYYPA-WMSPEALQKKPGDRNLEACDM 77
           C + E+LT  I +AD   S        ++ +GR   P  WM+ E +      +   A D+
Sbjct: 169 CLVGENLT--IKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILM---GKFTTASDV 223

Query: 78  WSFAVLLWELAT--REVPFADLTPMEVGMKVALEGLR-------ITIPPGISSHLSKLIR 128
           W+F V LWE+    +E P+ +LT  +V ++ A E  R       +  PP     L +L+ 
Sbjct: 224 WAFGVTLWEILMLCKEQPYGELTDEQV-IENAGEFFRDQGRQVYLFRPPPCPQGLYELML 282

Query: 129 ICMNEDPGKRPTF 141
            C + D  +RP+F
Sbjct: 283 QCWSRDCRERPSF 295

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in keratinocytes, colonic mucosa epithelium, lung epithelium, thyroid follicles, and the islets of Langerhans. During embryonic development, it is found in the developing neuroectoderm. DDR1 is a key regulator of cell morphogenesis, differentiation and proliferation. It is important in the development of the mammary gland, the vasculator and the kidney. DDR1 is also found in human leukocytes, where it facilitates cell adhesion, migration, maturation, and cytokine production. Length = 304

>gnl|CDD|173770 cd08528, STKc_Nek10, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

 Score = 38.3 bits (89), Expect = 6e-04
 Identities = 21/81 (25%), Positives = 42/81 (51%), Gaps = 5/81 (6%)

Query: 60  PEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGI 119
           PE ++ +P     E  D+W+F  +L+++ T + PF     + +  K+ +E +   +P G+
Sbjct: 182 PEIVKNEPYG---EKADVWAFGCILYQMCTLQPPFYSTNMLSLATKI-VEAVYEPLPEGM 237

Query: 120 -SSHLSKLIRICMNEDPGKRP 139
            S  ++ +I  C+  D   RP
Sbjct: 238 YSEDVTDVITSCLTPDAEARP 258

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. Length = 269

>gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

 Score = 38.2 bits (89), Expect = 7e-04
 Identities = 23/89 (25%), Positives = 40/89 (44%), Gaps = 7/89 (7%)

Query: 57  WMSPEALQKKPGDRNLEA-CDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITI 115
           WM+PE +      +   A  D+WS   ++ E+     P++D   +    K+  +     I
Sbjct: 176 WMAPEVIHSY--SQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAAMFKLGNKRSAPPI 233

Query: 116 PPGISSHLSKLIRICMNE----DPGKRPT 140
           PP +S +LS +    +N     +P  RPT
Sbjct: 234 PPDVSMNLSPVALDFLNACFTINPDNRPT 262

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272

>gnl|CDD|133240 cd05109, PTKc_HER2, Catalytic domain of the Protein Tyrosine Kinase, HER2

 Score = 38.1 bits (88), Expect = 7e-04
 Identities = 25/97 (25%), Positives = 42/97 (43%), Gaps = 3/97 (3%)

Query: 57  WMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIP 116
           WM+ E++  +   R     D+WS+ V +WEL T      D  P      +  +G R+  P
Sbjct: 177 WMALESILHR---RFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLEKGERLPQP 233

Query: 117 PGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKMKR 153
           P  +  +  ++  C   D   RP F  ++    +M R
Sbjct: 234 PICTIDVYMIMVKCWMIDSECRPRFRELVDEFSRMAR 270

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER2 does not bind to any known EGFR subfamily ligands, but contributes to the kinase activity of all possible heterodimers. It acts as the preferred partner with other ligand-bound EGFR proteins and functions as a signal amplifier, with the HER2-HER3 heterodimer being the most potent pair in mitogenic signaling. HER2 plays an important role in cell development, proliferation, survival and motility. Overexpression of HER2 results in its activation and downstream signaling, even in the absence of ligand. HER2 overexpression, mainly due to gene amplification, has been shown in a variety of human cancers. Its role in breast cancer is especially well-documented. HER2 is up-regulated in about 25% of breast tumors and is associated with increases in tumor aggressiveness, recurrence and mortality. HER2 is a target for monoclonal antibodies and small molecule inhibitors, which are being developed as treatments for cancer. The first humanized antibody approved for clinical use is Trastuzumab (Herceptin), which is being used in combination with other therapies to improve the survival rates of patients with HER2-overexpressing breast cancer. Length = 279

>gnl|CDD|173674 cd05583, STKc_MSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

 Score = 37.8 bits (88), Expect = 8e-04
 Identities = 23/86 (26%), Positives = 40/86 (46%), Gaps = 7/86 (8%)

Query: 57  WMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPF----ADLTPMEVGMKVALEGLR 112
           +M+PE ++   G  + +A D WS  VL +EL T   PF       +  E+  ++     +
Sbjct: 172 YMAPEVIRGGSGGHD-KAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISRRILKS--K 228

Query: 113 ITIPPGISSHLSKLIRICMNEDPGKR 138
              P  +S+     I+  + +DP KR
Sbjct: 229 PPFPKTMSAEARDFIQKLLEKDPKKR 254

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines. This triggers phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) in the C-terminal extension of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSKs are predominantly nuclear proteins. They are widely expressed in many tissues including heart, brain, lung, liver, kidney, and pancreas. There are two isoforms of MSK, called MSK1 and MSK2. Length = 288

>gnl|CDD|173647 cd05091, PTKc_Ror2, Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

 Score = 38.1 bits (88), Expect = 8e-04
 Identities = 27/90 (30%), Positives = 48/90 (53%), Gaps = 13/90 (14%)

Query: 57  WMSPEALQKKPGDRNLEACDMWSFAVLLWELATREV-PFADLTPMEVGMKVALEGLR--- 112
           WMSPEA+    G  ++++ D+WS+ V+LWE+ +  + P+   +  +V     +E +R   
Sbjct: 192 WMSPEAIMY--GKFSIDS-DIWSYGVVLWEVFSYGLQPYCGYSNQDV-----IEMIRNRQ 243

Query: 113 -ITIPPGISSHLSKLIRICMNEDPGKRPTF 141
            +  P    + +  L+  C NE P +RP F
Sbjct: 244 VLPCPDDCPAWVYTLMLECWNEFPSRRPRF 273

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror2 plays important roles in skeletal and heart formation. Ror2-deficient mice show widespread bone abnormalities, ventricular defects in the heart, and respiratory dysfunction. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Ror2 is also implicated in neural development. Length = 283

>gnl|CDD|173651 cd05095, PTKc_DDR2, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

 Score = 38.0 bits (88), Expect = 9e-04
 Identities = 31/105 (29%), Positives = 54/105 (51%), Gaps = 12/105 (11%)

Query: 46  FQQRGRCYYPA-WMSPEALQKKPGDRNLEACDMWSFAVLLWELAT--REVPFADLTPMEV 102
           ++ +GR   P  WMS E++      +   A D+W+F V LWE+ T  +E P++ L+  +V
Sbjct: 186 YRIQGRAVLPIRWMSWESILL---GKFTTASDVWAFGVTLWEILTLCKEQPYSQLSDEQV 242

Query: 103 ----GMKVALEGLRITIP-PGI-SSHLSKLIRICMNEDPGKRPTF 141
               G     +G ++ +P P +    L KL+  C   +  +RP+F
Sbjct: 243 IENTGEFFRDQGRQVYLPKPALCPDSLYKLMLSCWRRNAKERPSF 287

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues with the highest levels found in skeletal muscle, skin, kidney and lung. It is important in cell proliferation and development. Mice, with a deletion of DDR2, suffer from dwarfism and delayed healing of epidermal wounds. DDR2 also contributes to collagen (type I) regulation by inhibiting fibrillogenesis and altering the morphology of collagen fibers. It is also expressed in immature dendritic cells (DCs), where it plays a role in DC activation and function. Length = 296

>gnl|CDD|173661 cd05570, STKc_PKC, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

 Score = 37.7 bits (88), Expect = 0.001
 Identities = 23/87 (26%), Positives = 41/87 (47%), Gaps = 5/87 (5%)

Query: 52  CYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGL 111
           C  P +++PE L  +P      A D W+  VLL+E+   + PF      E+  +  LE  
Sbjct: 157 CGTPDYIAPEILSYQPYGP---AVDWWALGVLLYEMLAGQSPFEGDDEDEL-FQSILED- 211

Query: 112 RITIPPGISSHLSKLIRICMNEDPGKR 138
            +  P  +S     +++  + ++P KR
Sbjct: 212 EVRYPRWLSKEAKSILKSFLTKNPEKR 238

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only require PS. PKCs phosphorylate and modify the activities of a wide variety of cellular proteins including receptors, enzymes, cytoskeletal proteins, transcription factors, and other kinases. They play a central role in signal transduction pathways that regulate cell migration and polarity, proliferation, differentiation, and apoptosis. Also included in this subfamily are the PKC-like proteins, called PKNs. Length = 318

>gnl|CDD|173683 cd05592, STKc_nPKC_theta_delta, Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

 Score = 37.5 bits (87), Expect = 0.001
 Identities = 17/43 (39%), Positives = 26/43 (60%), Gaps = 3/43 (6%)

Query: 52  CYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPF 94
           C  P +++PE L+   G +  E+ D WSF VLL+E+   + PF
Sbjct: 157 CGTPDYIAPEILK---GQKYNESVDWWSFGVLLYEMLIGQSPF 196

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. Length = 316

>gnl|CDD|173708 cd05617, STKc_aPKC_zeta, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

 Score = 37.3 bits (86), Expect = 0.001
 Identities = 26/93 (27%), Positives = 46/93 (49%), Gaps = 10/93 (10%)

Query: 52  CYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPF------ADLTPMEVGMK 105
           C  P +++PE L+   G+    + D W+  VL++E+     PF       D+   +   +
Sbjct: 157 CGTPNYIAPEILR---GEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQ 213

Query: 106 VALEGLRITIPPGISSHLSKLIRICMNEDPGKR 138
           V LE   I IP  +S   S +++  +N+DP +R
Sbjct: 214 VILEK-PIRIPRFLSVKASHVLKGFLNKDPKER 245

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways. PKC-zeta also plays a central role in maintaining cell polarity in yeast and mammalian cells. In addition, it affects actin remodeling in muscle cells. Length = 327

>gnl|CDD|173707 cd05616, STKc_cPKC_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

 Score = 37.3 bits (86), Expect = 0.001
 Identities = 22/87 (25%), Positives = 41/87 (47%), Gaps = 5/87 (5%)

Query: 52  CYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGL 111
           C  P +++PE +  +P  +++   D W+F VLL+E+   + PF      E+   +     
Sbjct: 162 CGTPDYIAPEIIAYQPYGKSV---DWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEH-- 216

Query: 112 RITIPPGISSHLSKLIRICMNEDPGKR 138
            +  P  +S     + +  M + PGKR
Sbjct: 217 NVAYPKSMSKEAVAICKGLMTKHPGKR 243

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. The PKC beta isoforms (I and II), generated by alternative splicing of a single gene, are preferentially activated by hyperglycemia-induced DAG in retinal tissues. This is implicated in diabetic microangiopathy such as ischemia, neovascularization, and abnormal vasodilator function. PKC-beta also plays an important role in VEGF signaling. In addition, glucose regulates proliferation in retinal endothelial cells via PKC-betaI. PKC-beta is also being explored as a therapeutic target in cancer. It contributes to tumor formation and is involved in the tumor host mechanisms of inflammation and angiogenesis. Length = 323

>gnl|CDD|173650 cd05094, PTKc_TrkC, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

 Score = 36.9 bits (85), Expect = 0.002
 Identities = 24/98 (24%), Positives = 46/98 (46%), Gaps = 5/98 (5%)

Query: 57  WMSPEALQKKPGDRNLEACDMWSFAVLLWELATR-EVPFADLTPMEVGMKVALEGLRITI 115
           WM PE++  +   +     D+WSF V+LWE+ T  + P+  L+  EV ++   +G  +  
Sbjct: 191 WMPPESIMYR---KFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEV-IECITQGRVLER 246

Query: 116 PPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKMKR 153
           P      +  ++  C   +P +R     +  IL  + +
Sbjct: 247 PRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALGK 284

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some non-neural tissues including the developing heart. NT3/TrkC signaling plays an important role in the innervation of the cardiac conducting system and the development of smooth muscle cells. Mice deficient with NT3 and TrkC have multiple heart defects. NT3/TrkC signaling is also critical for the development and maintenance of enteric neurons that are important for the control of gut peristalsis. Length = 291

>gnl|CDD|173684 cd05593, STKc_PKB_gamma, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

 Score = 36.6 bits (84), Expect = 0.002
 Identities = 21/87 (24%), Positives = 42/87 (48%), Gaps = 5/87 (5%)

Query: 52  CYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGL 111
           C  P +++PE L+     R   A D W   V+++E+    +PF +    ++   + +E +
Sbjct: 156 CGTPEYLAPEVLEDNDYGR---AVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEDI 212

Query: 112 RITIPPGISSHLSKLIRICMNEDPGKR 138
           +   P  +S+    L+   + +DP KR
Sbjct: 213 K--FPRTLSADAKSLLSGLLIKDPNKR 237

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulated in estrogen-deficient breast cancer cells, androgen-independent prostate cancer cells, and primary ovarian tumors. It acts as a key mediator in the genesis of ovarian cancer. Length = 328

>gnl|CDD|173716 cd05627, STKc_NDR2, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

 Score = 36.9 bits (85), Expect = 0.002
 Identities = 24/83 (28%), Positives = 37/83 (44%), Gaps = 6/83 (7%)

Query: 55  PAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRIT 114
           P +++PE   +   ++    CD WS  V+++E+     PF   TP E   KV      + 
Sbjct: 200 PDYIAPEVFMQTGYNK---LCDWWSLGVIMYEMLIGYPPFCSETPQETYRKVMNWKETLV 256

Query: 115 IPPG--ISSHLSKLI-RICMNED 134
            PP   IS     LI R C + +
Sbjct: 257 FPPEVPISEKAKDLILRFCTDSE 279

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regulating neuronal growth and differentiation, as well as in facilitating neurite outgrowth. It is also implicated in fear conditioning as it contributes to the coupling of neuronal morphological changes with fear-memory consolidation. NDR2 is also referred to as STK38-like. Length = 360

>gnl|CDD|173767 cd08227, PK_STRAD_alpha, Pseudokinase domain of STE20-related kinase adapter protein alpha

 Score = 36.8 bits (85), Expect = 0.002
 Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 13/64 (20%)

Query: 57  WMSPEALQKKPGDRNLEA----CDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLR 112
           W+SPE LQ+     NL+      D++S  +   ELA   VPF D+       ++ LE L 
Sbjct: 174 WLSPEVLQQ-----NLQGYDAKSDIYSVGITACELANGHVPFKDMP----ATQMLLEKLN 224

Query: 113 ITIP 116
            T+P
Sbjct: 225 GTVP 228

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buccal mucosa. There are two forms of STRAD, alpha and beta, that complex with LKB1 and MO25. The structure of STRAD-alpha is available and shows that this protein binds ATP, has an ordered activation loop, and adopts a closed conformation typical of fully active protein kinases. It does not possess activity due to nonconservative substitutions of essential catalytic residues. ATP binding enhances the affinity of STRAD for MO25. The conformation of STRAD-alpha, stabilized through ATP and MO25, may be needed to activate LKB1. A mutation which results in a truncation of a C-terminal part of the human STRAD-alpha pseudokinase domain and disrupts its association with LKB1, leads to PMSE (polyhydramnios, megalencephaly, symptomatic epilepsy) syndrome. Several splice variants of STRAD-alpha exist which exhibit different effects on the localization and activation of LKB1. Length = 327

>gnl|CDD|173717 cd05628, STKc_NDR1, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

 Score = 36.6 bits (84), Expect = 0.002
 Identities = 27/91 (29%), Positives = 39/91 (42%), Gaps = 9/91 (9%)

Query: 43  QFSFQQRGRCYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEV 102
           Q +F   G    P +++PE   +   ++    CD WS  V+++E+     PF   TP E 
Sbjct: 191 QLAFSTVGT---PDYIAPEVFMQTGYNK---LCDWWSLGVIMYEMLIGYPPFCSETPQET 244

Query: 103 GMKVALEGLRITIPPG--ISSHLSKLI-RIC 130
             KV      +  PP   IS     LI R C
Sbjct: 245 YKKVMNWKETLIFPPEVPISEKAKDLILRFC 275

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, muscle, lung and spleen. It is not an essential protein because mice deficient of NDR1 remain viable and fertile. However, these mice develop T-cell lymphomas and appear to be hypersenstive to carcinogenic treatment. NDR1 appears to act as a tumor suppressor. NDR1 is also called STK38. Length = 363

>gnl|CDD|132978 cd06647, STKc_PAK_I, Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

 Score = 36.4 bits (84), Expect = 0.003
 Identities = 29/118 (24%), Positives = 48/118 (40%), Gaps = 18/118 (15%)

Query: 23  FLFCCQIDEDLTARINMADAQFSFQQRGRCYYPAWMSPEALQKKP-GDRNLEACDMWSFA 81
           F FC QI  + + R  M               P WM+PE + +K  G +     D+WS  
Sbjct: 159 FGFCAQITPEQSKRSTMVGT------------PYWMAPEVVTRKAYGPK----VDIWSLG 202

Query: 82  VLLWELATREVPFADLTPMEVGMKVALEGL-RITIPPGISSHLSKLIRICMNEDPGKR 138
           ++  E+   E P+ +  P+     +A  G   +  P  +S+     +  C+  D  KR
Sbjct: 203 IMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKR 260

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs, also called conventional PAKs, include PAK1, PAK2, and PAK3. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). They interact with the SH3 domain containing proteins Nck, Grb2 and PIX. Binding of group I PAKs to activated GTPases leads to conformational changes that destabilize the AID, allowing autophosphorylation and full activation of the kinase domain. Known group I PAK substrates include MLCK, Bad, Raf, MEK1, LIMK, Merlin, Vimentin, Myc, Stat5a, and Aurora A, among others. Length = 293

>gnl|CDD|173693 cd05602, STKc_SGK1, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

 Score = 36.5 bits (84), Expect = 0.003
 Identities = 23/87 (26%), Positives = 41/87 (47%), Gaps = 5/87 (5%)

Query: 52  CYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGL 111
           C  P +++PE L K+P DR +   D W    +L+E+     PF      E+   +  + L
Sbjct: 157 CGTPEYLAPEVLHKQPYDRTV---DWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPL 213

Query: 112 RITIPPGISSHLSKLIRICMNEDPGKR 138
           ++   P I++    L+   + +D  KR
Sbjct: 214 QLK--PNITNSARHLLEGLLQKDRTKR 238

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt sensitivity, memory consolidation, and cardiac repolarization. A common SGK1 variant is associated with increased blood pressure and body weight. SGK1 may also contribute to tumor growth, neurodegeneration, fibrosing disease, and ischemia. Length = 325

>gnl|CDD|173666 cd05575, STKc_SGK, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

 Score = 36.3 bits (84), Expect = 0.003
 Identities = 25/87 (28%), Positives = 40/87 (45%), Gaps = 5/87 (5%)

Query: 52  CYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGL 111
           C  P +++PE L+K+P DR     D W    +L+E+     PF      E+   +  + L
Sbjct: 157 CGTPEYLAPEVLRKQPYDR---TVDWWCLGAVLYEMLYGLPPFYSRDTAEMYDNILNKPL 213

Query: 112 RITIPPGISSHLSKLIRICMNEDPGKR 138
           R  + P IS     L+   + +D  KR
Sbjct: 214 R--LKPNISVSARHLLEGLLQKDRTKR 238

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell proliferation, and apoptosis. Length = 323

>gnl|CDD|173701 cd05610, STKc_MASTL, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

 Score = 36.4 bits (84), Expect = 0.004
 Identities = 31/90 (34%), Positives = 39/90 (43%), Gaps = 12/90 (13%)

Query: 55  PAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRIT 114
           P +++PE L  KP      A D W+  V L+E  T   PF D TP +V   +    L   
Sbjct: 544 PDYLAPELLLGKPHG---PAVDWWALGVCLFEFLTGIPPFNDETPQQVFQNI----LNRD 596

Query: 115 IP-PGISSHLS----KLIRICMNEDPGKRP 139
           IP P     LS      I I +  DP KR 
Sbjct: 597 IPWPEGEEKLSVNAQNAIEILLTMDPTKRA 626

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ14813 is associated with autosomal dominant thrombocytopenia. To date, the function of MASTL is unknown. Length = 669

>gnl|CDD|214801 smart00750, KIND, kinase non-catalytic C-lobe domain

 Score = 35.5 bits (82), Expect = 0.004
 Identities = 22/94 (23%), Positives = 44/94 (46%), Gaps = 11/94 (11%)

Query: 55  PAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRIT 114
           P +M+PE +Q +      E  D++S  + L+E    E+P+ +   +   +++ L G+   
Sbjct: 68  PYFMAPEVIQGQSYT---EKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPAD 124

Query: 115 IPP------GISSHLS--KLIRICMNEDPGKRPT 140
            P       G+S+  S    +R+C +  P +R  
Sbjct: 125 DPRDRSNLEGVSAARSFEDFMRLCASRLPQRREA 158

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features. Length = 176

>gnl|CDD|173712 cd05622, STKc_ROCK1, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

 Score = 36.1 bits (83), Expect = 0.004
 Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 1/41 (2%)

Query: 55  PAWMSPEALQKKPGDRNL-EACDMWSFAVLLWELATREVPF 94
           P ++SPE L+ + GD      CD WS  V L+E+   + PF
Sbjct: 207 PDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 247

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, and kidney. It mediates signaling from Rho to the actin cytoskeleton. It is implicated in the development of cardiac fibrosis, cardiomyocyte apoptosis, and hyperglycemia. Mice deficient with ROCK1 display eyelids open at birth (EOB) and omphalocele phenotypes due to the disorganization of actin filaments in the eyelids and the umbilical ring. Length = 371

>gnl|CDD|173686 cd05595, STKc_PKB_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

 Score = 36.1 bits (83), Expect = 0.004
 Identities = 21/87 (24%), Positives = 40/87 (45%), Gaps = 5/87 (5%)

Query: 52  CYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGL 111
           C  P +++PE L+     R   A D W   V+++E+    +PF +     +   + +E +
Sbjct: 156 CGTPEYLAPEVLEDNDYGR---AVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEI 212

Query: 112 RITIPPGISSHLSKLIRICMNEDPGKR 138
           R   P  +S     L+   + +DP +R
Sbjct: 213 R--FPRTLSPEAKSLLAGLLKKDPKQR 237

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in PKB-beta display normal growth weights but exhibit severe insulin resistance and diabetes, accompanied by lipoatrophy and B-cell failure. Length = 323

>gnl|CDD|173673 cd05582, STKc_RSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

 Score = 35.9 bits (83), Expect = 0.004
 Identities = 22/82 (26%), Positives = 41/82 (50%), Gaps = 5/82 (6%)

Query: 57  WMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIP 116
           +M+PE + ++      ++ D WSF VL++E+ T  +PF      E  M + L+  ++ +P
Sbjct: 164 YMAPEVVNRRGHT---QSADWWSFGVLMFEMLTGSLPFQGKDRKET-MTMILKA-KLGMP 218

Query: 117 PGISSHLSKLIRICMNEDPGKR 138
             +S     L+R     +P  R
Sbjct: 219 QFLSPEAQSLLRALFKRNPANR 240

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylates all known RSK substrates. RSKs act as downstream effectors of mitogen-activated protein kinase (MAPK) and play key roles in mitogen-activated cell growth, differentiation, and survival. Mammals possess four RSK isoforms (RSK1-4) from distinct genes. RSK proteins are also referred to as MAP kinase-activated protein kinases (MAPKAPKs), p90-RSKs, or p90S6Ks. Length = 318

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	153
KOG0192|consensus	362		100.0
KOG0581|consensus	364		99.98
KOG0578|consensus	550		99.97
KOG0197|consensus	468		99.97
KOG0575|consensus	592		99.97
KOG0615|consensus	475		99.97
KOG0198|consensus	313		99.97
KOG0201|consensus	467		99.97
KOG0598|consensus	357		99.97
PHA02988	283	hypothetical protein; Provisional	99.96
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	99.96
KOG0616|consensus	355		99.96
KOG0592|consensus	604		99.96
KOG0694|consensus	694		99.96
KOG0582|consensus	516		99.96
KOG0591|consensus	375		99.96
KOG1026|consensus	774		99.96
KOG0983|consensus	391		99.96
KOG0588|consensus	786		99.96
KOG0583|consensus	370		99.96
KOG0599|consensus	411		99.96
KOG0193|consensus	678		99.95
KOG4721|consensus	904		99.95
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	99.95
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	99.95
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	99.95
KOG1095|consensus	1025		99.95
KOG0597|consensus	808		99.95
KOG4645|consensus	1509		99.95
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	99.95
KOG0585|consensus	576		99.95
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	99.95
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	99.95
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	99.95
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	99.95
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	99.95
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	99.94
KOG0593|consensus	396		99.94
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	99.94
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	99.94
KOG4278|consensus	1157		99.94
PTZ00283	496	serine/threonine protein kinase; Provisional	99.94
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	99.94
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	99.94
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	99.94
KOG0194|consensus	474		99.94
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	99.94
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	99.94
KOG0696|consensus	683		99.94
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	99.94
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	99.94
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	99.94
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	99.94
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	99.94
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	99.94
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	99.94
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	99.94
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	99.94
PTZ00267	478	NIMA-related protein kinase; Provisional	99.94
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	99.94
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	99.94
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	99.94
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	99.94
PTZ00036	440	glycogen synthase kinase; Provisional	99.94
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	99.94
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	99.94
KOG4279|consensus	1226		99.94
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	99.94
PTZ00263	329	protein kinase A catalytic subunit; Provisional	99.94
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	99.94
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	99.94
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	99.94
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	99.94
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	99.94
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	99.94
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	99.94
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	99.94
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	99.94
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	99.94
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	99.94
KOG0579|consensus	1187		99.94
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	99.94
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	99.94
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	99.94
KOG1024|consensus	563		99.94
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	99.94
KOG0605|consensus	550		99.94
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	99.94
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	99.94
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	99.94
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	99.94
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	99.94
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	99.94
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	99.94
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	99.94
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	99.94
KOG0589|consensus	426		99.94
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	99.94
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	99.94
KOG0596|consensus	677		99.94
KOG0660|consensus	359		99.94
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	99.94
KOG0033|consensus	355		99.94
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	99.94
PHA02882	294	putative serine/threonine kinase; Provisional	99.94
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	99.93
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	99.93
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	99.93
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	99.93
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	99.93
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	99.93
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	99.93
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	99.93
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	99.93
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	99.93
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	99.93
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	99.93
KOG4257|consensus	974		99.93
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	99.93
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	99.93
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	99.93
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	99.93
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	99.93
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	99.93
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	99.93
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	99.93
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	99.93
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	99.93
PLN00034	353	mitogen-activated protein kinase kinase; Provision	99.93
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	99.93
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	99.93
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	99.93
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	99.93
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	99.93
KOG0577|consensus	948		99.93
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	99.93
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	99.93
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	99.93
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	99.93
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	99.93
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	99.93
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	99.93
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	99.93
KOG0196|consensus	996		99.93
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	99.93
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	99.93
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	99.93
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	99.93
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	99.93
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	99.93
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	99.93
KOG0690|consensus	516		99.93
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	99.93
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	99.93
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	99.93
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	99.93
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	99.93
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	99.93
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	99.93
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	99.93
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	99.93
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	99.93
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	99.93
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	99.93
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	99.93
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	99.93
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	99.93
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	99.93
KOG0600|consensus	560		99.93
KOG0200|consensus	609		99.93
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	99.93
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	99.93
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	99.93
PTZ00284	467	protein kinase; Provisional	99.93
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	99.92
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	99.92
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	99.92
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	99.92
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	99.92
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	99.92
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	99.92
smart00750	176	KIND kinase non-catalytic C-lobe domain. It is an	99.92
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	99.92
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	99.92
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	99.92
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	99.92
KOG0580|consensus	281		99.92
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	99.92
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	99.92
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	99.92
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	99.92
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	99.92
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	99.92
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	99.92
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	99.92
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	99.92
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	99.92
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	99.92
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	99.92
KOG1989|consensus	738		99.92
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	99.92
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	99.92
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	99.92
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	99.92
KOG0661|consensus	538		99.92
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	99.92
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	99.92
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	99.92
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	99.92
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	99.92
KOG0595|consensus	429		99.92
KOG2345|consensus	302		99.92
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	99.92
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	99.92
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	99.92
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	99.92
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	99.92
PHA03212	391	serine/threonine kinase US3; Provisional	99.92
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	99.92
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	99.92
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	99.92
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	99.92
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	99.92
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	99.92
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	99.92
KOG0603|consensus	612		99.92
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	99.92
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	99.92
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	99.92
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	99.92
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	99.92
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	99.92
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	99.92
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	99.91
KOG1187|consensus	361		99.91
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	99.91
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	99.91
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	99.91
KOG0614|consensus	732		99.91
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	99.91
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	99.91
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	99.91
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	99.91
KOG0584|consensus	632		99.91
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	99.91
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	99.91
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	99.91
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	99.91
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	99.91
KOG0659|consensus	318		99.91
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	99.91
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	99.91
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	99.91
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	99.91
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	99.91
PHA03207	392	serine/threonine kinase US3; Provisional	99.91
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	99.91
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	99.91
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	99.91
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	99.91
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	99.91
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	99.91
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	99.91
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	99.91
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	99.91
KOG4717|consensus	864		99.91
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	99.91
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	99.91
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	99.91
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	99.91
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	99.91
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	99.91
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	99.91
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	99.91
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	99.91
KOG0610|consensus	459		99.91
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	99.91
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	99.91
KOG0611|consensus	668		99.91
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	99.9
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	99.9
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	99.9
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	99.9
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	99.9
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	99.9
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	99.9
KOG0032|consensus	382		99.9
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	99.9
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	99.9
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	99.9
KOG0658|consensus	364		99.9
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	99.9
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	99.9
PHA03209	357	serine/threonine kinase US3; Provisional	99.9
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	99.9
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	99.9
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	99.9
PTZ00266	1021	NIMA-related protein kinase; Provisional	99.9
KOG0594|consensus	323		99.9
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	99.9
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	99.9
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	99.9
PHA03211	461	serine/threonine kinase US3; Provisional	99.9
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	99.9
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	99.9
PHA03210	501	serine/threonine kinase US3; Provisional	99.9
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	99.9
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	99.9
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	99.9
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	99.9
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	99.9
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	99.9
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	99.9
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	99.9
PTZ00024	335	cyclin-dependent protein kinase; Provisional	99.9
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	99.89
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	99.89
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	99.89
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	99.89
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	99.89
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	99.89
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	99.89
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	99.89
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	99.89
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	99.89
KOG1035|consensus	1351		99.89
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	99.89
KOG0604|consensus	400		99.89
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	99.89
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	99.89
KOG0574|consensus	502		99.89
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	99.89
KOG0199|consensus	1039		99.89
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	99.89
PLN00009	294	cyclin-dependent kinase A; Provisional	99.89
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	99.89
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	99.89
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	99.89
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	99.89
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	99.89
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	99.89
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	99.89
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	99.89
KOG0663|consensus	419		99.89
KOG1006|consensus	361		99.89
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	99.89
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	99.89
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	99.89
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	99.89
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	99.89
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	99.89
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	99.89
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	99.89
KOG0612|consensus	1317		99.88
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	99.88
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	99.88
PLN00181	793	protein SPA1-RELATED; Provisional	99.88
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	99.88
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	99.88
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	99.88
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	99.88
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	99.88
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	99.88
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	99.88
KOG1094|consensus	807		99.88
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	99.88
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	99.88
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	99.88
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	99.88
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	99.87
KOG0986|consensus	591		99.87
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	99.87
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	99.87
KOG0667|consensus	586		99.87
KOG0695|consensus	593		99.87
KOG0586|consensus	596		99.87
KOG0195|consensus	448		99.86
KOG0587|consensus	953		99.86
KOG1025|consensus	1177		99.86
KOG0984|consensus	282		99.85
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	99.85
KOG0669|consensus	376		99.83
KOG1027|consensus	903		99.81
KOG0665|consensus	369		99.8
KOG2052|consensus	513		99.79
KOG0608|consensus	1034		99.79
KOG0671|consensus	415		99.78
KOG4236|consensus	888		99.77
KOG0666|consensus	438		99.77
KOG0576|consensus	829		99.77
KOG3653|consensus	534		99.76
KOG0670|consensus	752		99.76
PLN03224	507	probable serine/threonine protein kinase; Provisio	99.75
KOG0607|consensus	463		99.75
KOG0664|consensus	449		99.73
KOG4250|consensus	732		99.73
KOG1151|consensus	775		99.71
KOG4158|consensus	598		99.7
KOG0606|consensus	1205		99.7
KOG1345|consensus	378		99.69
KOG0662|consensus	292		99.68
KOG0668|consensus	338		99.68
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	99.68
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	99.67
KOG0590|consensus	601		99.64
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	99.63
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	99.56
KOG1023|consensus	484		99.56
KOG0603|consensus	612		99.54
KOG1167|consensus	418		99.52
KOG1152|consensus	772		99.45
KOG1240|consensus	1431		99.42
KOG1033|consensus	516		99.4
KOG1290|consensus	590		99.37
KOG1164|consensus	322		99.35
COG0515	384	SPS1 Serine/threonine protein kinase [General func	99.29
KOG1163|consensus	341		99.09
KOG0590|consensus	601		99.0
KOG1165|consensus	449		98.94
KOG0606|consensus	1205		98.78
PRK12274	218	serine/threonine protein kinase; Provisional	98.66
PRK09188	365	serine/threonine protein kinase; Provisional	98.66
KOG1266|consensus	458		98.64
KOG2137|consensus	700		98.6
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	98.56
KOG1166|consensus	974		98.45
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	98.28
COG4248	637	Uncharacterized protein with protein kinase and he	98.18
KOG0601|consensus	524		98.17
cd05145	190	RIO1_like RIO kinase family; RIO1, RIO3 and simila	97.96
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	97.89
cd05144	198	RIO2_C RIO kinase family; RIO2, C-terminal catalyt	97.78
PRK01723	239	3-deoxy-D-manno-octulosonic-acid kinase; Reviewed	97.75
KOG1243|consensus	690		97.74
KOG0601|consensus	524		97.57
smart00090	237	RIO RIO-like kinase.	97.49
cd05119	187	RIO RIO kinase family, catalytic domain. The RIO k	97.3
COG3642	204	Mn2+-dependent serine/threonine protein kinase [Si	97.26
PRK14879	211	serine/threonine protein kinase; Provisional	97.18
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	97.09
PRK09605	535	bifunctional UGMP family protein/serine/threonine	96.97
PRK10345	210	hypothetical protein; Provisional	96.95
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	96.1
KOG3087|consensus	229		95.91
PRK15123	268	lipopolysaccharide core heptose(I) kinase RfaP; Pr	95.84
cd05120	155	APH_ChoK_like Aminoglycoside 3'-phosphotransferase	95.8
PF06293	206	Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family;	95.77
cd05151	170	ChoK Choline Kinase (ChoK). The ChoK subfamily is	95.64
cd05146	197	RIO3_euk RIO kinase family; eukaryotic RIO3, catal	95.4
PF01163	188	RIO1: RIO1 family; InterPro: IPR018934 Protein pho	95.32
PRK09902	216	hypothetical protein; Provisional	94.76
KOG3741|consensus	655		92.87
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	91.46
KOG1093|consensus	725		91.0
KOG0592|consensus	604		89.95
KOG1290|consensus	590		88.92
PF06176	229	WaaY: Lipopolysaccharide core biosynthesis protein	87.36
COG0478	304	RIO-like serine/threonine protein kinase fused to	87.02
KOG1035|consensus	1351		86.79
KOG0615|consensus	475		83.61
KOG0599|consensus	411		81.8
KOG0612|consensus	1317		81.35

>KOG0192|consensus

Probab=100.00  E-value=9.5e-34  Score=195.21  Aligned_cols=149  Identities=31%  Similarity=0.467  Sum_probs=132.3

Q ss_pred             CccchhhHHhhhhcCC-CCCCCeeeeeeeecccc-chhhccccccccccc-------CCcccCCcccCccccccCCCCCC
Q psy12581          1 MKKKKIVYSFYLNSKK-SKTSNAFLFCCQIDEDL-TARINMADAQFSFQQ-------RGRCYYPAWMSPEALQKKPGDRN   71 (153)
Q Consensus         1 ~~~~~~~~~~~lh~~~-i~~~ni~~~~~~~~~~~-~~kl~~~d~g~~~~~-------~~~~~~~~~~~pe~~~~~~~~~~   71 (153)
                      +++|.+....|||+++ |+|+|+++.|++++.++ ++||+  |||++...       +...||+.|||||++.+. ...+
T Consensus       147 ~aldiArGm~YLH~~~~iIHrDLK~~NiLv~~~~~~~KI~--DFGlsr~~~~~~~~~~~~~GT~~wMAPEv~~~~-~~~~  223 (362)
T KOG0192|consen  147 IALDIARGMEYLHSEGPIIHRDLKSDNILVDLKGKTLKIA--DFGLSREKVISKTSMTSVAGTYRWMAPEVLRGE-KSPY  223 (362)
T ss_pred             HHHHHHHHHHHHhcCCCeeecccChhhEEEcCCCCEEEEC--CCccceeeccccccccCCCCCccccChhhhcCC-CCcC
Confidence            4678888999999999 99999999999999997 89999  99998332       235889999999999954 2356


Q ss_pred             cchhhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHhhh
Q psy12581         72 LEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKM  151 (153)
Q Consensus        72 ~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~~~  151 (153)
                      +.++|+||||+++||++||+.||.+.........++....++..|...++.+.+++.+||..||++||++.+++..|+.+
T Consensus       224 ~~K~DvySFgIvlWEl~t~~~Pf~~~~~~~~~~~v~~~~~Rp~~p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~  303 (362)
T KOG0192|consen  224 TEKSDVYSFGIVLWELLTGEIPFEDLAPVQVASAVVVGGLRPPIPKECPPHLSSLMERCWLVDPSRRPSFLEIVSRLESI  303 (362)
T ss_pred             CccchhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCCCCCccCCHHHHHHHHHhCCCCCCcCCCHHHHHHHHHHH
Confidence            79999999999999999999999999887777777778888988999999999999999999999999999999999876


Q ss_pred             h
Q psy12581        152 K  152 (153)
Q Consensus       152 ~  152 (153)
                      .
T Consensus       304 ~  304 (362)
T KOG0192|consen  304 M  304 (362)
T ss_pred             H
Confidence            4

>KOG0581|consensus

Probab=99.98  E-value=1.1e-32  Score=184.36  Aligned_cols=135  Identities=21%  Similarity=0.296  Sum_probs=114.1

Q ss_pred             hhHHhhhhc-CCCCCCCeeeeeeeeccccchhhccccccccccc-----CCcccCCcccCccccccCCCCCCcchhhHHH
Q psy12581          6 IVYSFYLNS-KKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ-----RGRCYYPAWMSPEALQKKPGDRNLEACDMWS   79 (153)
Q Consensus         6 ~~~~~~lh~-~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~-----~~~~~~~~~~~pe~~~~~~~~~~~~~~dv~s   79 (153)
                      .-.+.|||+ ++|+|+||+++|++++..|.+|++  |||.+...     .+..||..||+||.+.+.   .++.++||||
T Consensus       188 L~GL~YLh~~~~IIHRDIKPsNlLvNskGeVKic--DFGVS~~lvnS~a~tfvGT~~YMsPERi~g~---~Ys~~sDIWS  262 (364)
T KOG0581|consen  188 LRGLSYLHEERKIIHRDIKPSNLLVNSKGEVKIC--DFGVSGILVNSIANTFVGTSAYMSPERISGE---SYSVKSDIWS  262 (364)
T ss_pred             HHHHHHHhhccCeeeccCCHHHeeeccCCCEEec--cccccHHhhhhhcccccccccccChhhhcCC---cCCcccceec
Confidence            345789995 999999999999999999999999  99998433     456899999999999985   4458899999


Q ss_pred             HHHHHHHHHhCCCCCCCC-----CchhhhHHHHhhccccCCCCC-CCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581         80 FAVLLWELATREVPFADL-----TPMEVGMKVALEGLRITIPPG-ISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus        80 ~g~~~~~~~~g~~p~~~~-----~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      ||..++|+.+|+.||...     ...+.+..++. +..+..|.. +++++++|+..||+.||+.||++.++++
T Consensus       263 LGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~Iv~-~ppP~lP~~~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~  334 (364)
T KOG0581|consen  263 LGLSLLELAIGRFPYPPPNPPYLDIFELLCAIVD-EPPPRLPEGEFSPEFRSFVSCCLRKDPSERPSAKQLLQ  334 (364)
T ss_pred             ccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHHhc-CCCCCCCcccCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence            999999999999999764     34455555554 345566775 9999999999999999999999999974

>KOG0578|consensus

Probab=99.97  E-value=4.3e-32  Score=189.57  Aligned_cols=140  Identities=20%  Similarity=0.345  Sum_probs=120.9

Q ss_pred             ccchhhHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccc-------cCCcccCCcccCccccccCCCCCCcch
Q psy12581          2 KKKKIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQ-------QRGRCYYPAWMSPEALQKKPGDRNLEA   74 (153)
Q Consensus         2 ~~~~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~-------~~~~~~~~~~~~pe~~~~~~~~~~~~~   74 (153)
                      |...--++.|||.++|+|+||+.+||+++.+|.+|+.  |||++-+       ...-.|||+|||||++....+   +.+
T Consensus       375 cre~l~aL~fLH~~gIiHrDIKSDnILL~~~g~vKlt--DFGFcaqi~~~~~KR~TmVGTPYWMAPEVvtrk~Y---G~K  449 (550)
T KOG0578|consen  375 CREILQGLKFLHARGIIHRDIKSDNILLTMDGSVKLT--DFGFCAQISEEQSKRSTMVGTPYWMAPEVVTRKPY---GPK  449 (550)
T ss_pred             HHHHHHHHHHHHhcceeeeccccceeEeccCCcEEEe--eeeeeeccccccCccccccCCCCccchhhhhhccc---Ccc
Confidence            4455568999999999999999999999999998888  9999832       244589999999999987544   489


Q ss_pred             hhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhcc-ccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581         75 CDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGL-RITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus        75 ~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      .||||||+.++||+-|++||....+...++.+...+. ....+...++.+++|+.+||+.|+++|+++.++|+
T Consensus       450 VDIWSLGIMaIEMveGEPPYlnE~PlrAlyLIa~ng~P~lk~~~klS~~~kdFL~~cL~~dv~~RasA~eLL~  522 (550)
T KOG0578|consen  450 VDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPKLKNPEKLSPELKDFLDRCLVVDVEQRASAKELLE  522 (550)
T ss_pred             ccchhhhhHHHHHhcCCCCccCCChHHHHHHHhhcCCCCcCCccccCHHHHHHHHHHhhcchhcCCCHHHHhc
Confidence            9999999999999999999998887777776665543 55667889999999999999999999999999985

>KOG0197|consensus

Probab=99.97  E-value=9e-32  Score=186.81  Aligned_cols=145  Identities=31%  Similarity=0.507  Sum_probs=125.6

Q ss_pred             ccchhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc--------CCcccCCcccCccccccCCCCCCcc
Q psy12581          2 KKKKIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ--------RGRCYYPAWMSPEALQKKPGDRNLE   73 (153)
Q Consensus         2 ~~~~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~--------~~~~~~~~~~~pe~~~~~~~~~~~~   73 (153)
                      |++..=...||++++++|+|+..+||+|+++..+||+  |||++...        ....-+..|+|||.+...   .++.
T Consensus       309 a~qIaeGM~YLes~~~IHRDLAARNiLV~~~~~vKIs--DFGLAr~~~d~~Y~~~~~~kfPIkWtAPEa~~~~---~FS~  383 (468)
T KOG0197|consen  309 AAQIAEGMAYLESKNYIHRDLAARNILVDEDLVVKIS--DFGLARLIGDDEYTASEGGKFPIKWTAPEALNYG---KFSS  383 (468)
T ss_pred             HHHHHHHHHHHHhCCccchhhhhhheeeccCceEEEc--ccccccccCCCceeecCCCCCCceecCHHHHhhC---Cccc
Confidence            3445556789999999999999999999999999999  99999532        122335589999999864   5679


Q ss_pred             hhhHHHHHHHHHHHHh-CCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHhhhh
Q psy12581         74 ACDMWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKMK  152 (153)
Q Consensus        74 ~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~~~~  152 (153)
                      ++||||||++++|++| |+.||.+....+... .+..+++++.|..++..+.++|..||..+|++|||++.+...|+++.
T Consensus       384 kSDVWSFGVlL~E~fT~G~~py~~msn~ev~~-~le~GyRlp~P~~CP~~vY~lM~~CW~~~P~~RPtF~~L~~~l~~~~  462 (468)
T KOG0197|consen  384 KSDVWSFGVLLWELFTYGRVPYPGMSNEEVLE-LLERGYRLPRPEGCPDEVYELMKSCWHEDPEDRPTFETLREVLEDFF  462 (468)
T ss_pred             ccceeehhhhHHHHhccCCCCCCCCCHHHHHH-HHhccCcCCCCCCCCHHHHHHHHHHhhCCcccCCCHHHHHHHHHHhh
Confidence            9999999999999998 999999988777764 46689999999999999999999999999999999999999988764

>KOG0575|consensus

Probab=99.97  E-value=1.1e-31  Score=188.93  Aligned_cols=132  Identities=27%  Similarity=0.408  Sum_probs=116.7

Q ss_pred             HHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc-------CCcccCCcccCccccccCCCCCCcchhhHHHH
Q psy12581          8 YSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ-------RGRCYYPAWMSPEALQKKPGDRNLEACDMWSF   80 (153)
Q Consensus         8 ~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~-------~~~~~~~~~~~pe~~~~~~~~~~~~~~dv~s~   80 (153)
                      .+.|||+++|+|+|+++.|++++.+..+||.  |||+|...       .+.||||.|.|||++....+   +-.+|+||+
T Consensus       130 GlkYLH~~~IiHRDLKLGNlfL~~~~~VKIg--DFGLAt~le~~~Erk~TlCGTPNYIAPEVl~k~gH---sfEvDiWSl  204 (592)
T KOG0575|consen  130 GLKYLHSLGIIHRDLKLGNLFLNENMNVKIG--DFGLATQLEYDGERKKTLCGTPNYIAPEVLNKSGH---SFEVDIWSL  204 (592)
T ss_pred             HHHHHHhcCceecccchhheeecCcCcEEec--ccceeeeecCcccccceecCCCcccChhHhccCCC---CCchhhhhh
Confidence            5789999999999999999999999999999  99999443       34599999999999986544   478999999


Q ss_pred             HHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581         81 AVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus        81 g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      ||++|.++.|++||....-.+...++....+..  |...+.++++++.++|..+|..|||+++|+.
T Consensus       205 GcvmYtLL~G~PPFetk~vkety~~Ik~~~Y~~--P~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~  268 (592)
T KOG0575|consen  205 GCVMYTLLVGRPPFETKTVKETYNKIKLNEYSM--PSHLSAEAKDLIRKLLRPNPSERPSLDEVLD  268 (592)
T ss_pred             hhHHHhhhhCCCCcccchHHHHHHHHHhcCccc--ccccCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence            999999999999999988888877776665544  7789999999999999999999999999974

>KOG0615|consensus

Probab=99.97  E-value=7e-32  Score=182.84  Aligned_cols=140  Identities=19%  Similarity=0.224  Sum_probs=111.9

Q ss_pred             hHHhhhhcCCCCCCCeeeeeeeeccc-cchhhcccccccccc------cCCcccCCcccCccccccCCCCCCcchhhHHH
Q psy12581          7 VYSFYLNSKKSKTSNAFLFCCQIDED-LTARINMADAQFSFQ------QRGRCYYPAWMSPEALQKKPGDRNLEACDMWS   79 (153)
Q Consensus         7 ~~~~~lh~~~i~~~ni~~~~~~~~~~-~~~kl~~~d~g~~~~------~~~~~~~~~~~~pe~~~~~~~~~~~~~~dv~s   79 (153)
                      .+.+|||++||.|+||+++||++..+ ..+.++++|||++..      +.+.|||+.|.|||++.+........+.|+||
T Consensus       287 ~avkYLH~~GI~HRDiKPeNILl~~~~e~~llKItDFGlAK~~g~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWS  366 (475)
T KOG0615|consen  287 TAVKYLHSQGIIHRDIKPENILLSNDAEDCLLKITDFGLAKVSGEGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWS  366 (475)
T ss_pred             HHHHHHHHcCcccccCCcceEEeccCCcceEEEecccchhhccccceehhhhcCCccccChhheecCCeecccchheeee
Confidence            46799999999999999999999866 334445559999943      35679999999999998765444456899999


Q ss_pred             HHHHHHHHHhCCCCCCCCCchh-hhHHHHhhccc--cCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581         80 FAVLLWELATREVPFADLTPME-VGMKVALEGLR--ITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus        80 ~g~~~~~~~~g~~p~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      +||++|-+++|.+||.+..... ...++....+.  ++.....+.+..+++.+||+.||+.|||+.++++
T Consensus       367 lGcvLfvcLsG~pPFS~~~~~~sl~eQI~~G~y~f~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~  436 (475)
T KOG0615|consen  367 LGCVLFVCLSGYPPFSEEYTDPSLKEQILKGRYAFGPLQWDRISEEALDLINWMLVVDPENRPSADEALN  436 (475)
T ss_pred             ccceEEEEeccCCCcccccCCccHHHHHhcCcccccChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhc
Confidence            9999999999999998766555 44445444332  2334568899999999999999999999999984

>KOG0198|consensus

Probab=99.97  E-value=3.7e-31  Score=178.13  Aligned_cols=136  Identities=22%  Similarity=0.344  Sum_probs=113.7

Q ss_pred             HHhhhhcCCCCCCCeeeeeeeecc-ccchhhcccccccccccC----------CcccCCcccCccccccCCCCCCcchhh
Q psy12581          8 YSFYLNSKKSKTSNAFLFCCQIDE-DLTARINMADAQFSFQQR----------GRCYYPAWMSPEALQKKPGDRNLEACD   76 (153)
Q Consensus         8 ~~~~lh~~~i~~~ni~~~~~~~~~-~~~~kl~~~d~g~~~~~~----------~~~~~~~~~~pe~~~~~~~~~~~~~~d   76 (153)
                      .+.|||+++++|.||++.||+++. ++.+||.  |||.+....          ...||+.||+||.+...  .....++|
T Consensus       129 GL~ylHs~g~vH~DiK~~NiLl~~~~~~~Kla--DFG~a~~~~~~~~~~~~~~~~~Gtp~~maPEvi~~g--~~~~~~sD  204 (313)
T KOG0198|consen  129 GLAYLHSKGIVHCDIKPANILLDPSNGDVKLA--DFGLAKKLESKGTKSDSELSVQGTPNYMAPEVIRNG--EVARRESD  204 (313)
T ss_pred             HHHHHHhCCEeccCcccceEEEeCCCCeEEec--cCccccccccccccccccccccCCccccCchhhcCC--CcCCccch
Confidence            578999999999999999999999 6999999  999874332          35799999999999851  11225899


Q ss_pred             HHHHHHHHHHHHhCCCCCCC-CCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHH
Q psy12581         77 MWSFAVLLWELATREVPFAD-LTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPI  147 (153)
Q Consensus        77 v~s~g~~~~~~~~g~~p~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~  147 (153)
                      +||+||++.||+||+.||.. .........+......+..|...+....+|+.+|+..+|+.|||+.++++.
T Consensus       205 iWSlGCtVvEM~Tg~~PW~~~~~~~~~~~~ig~~~~~P~ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~h  276 (313)
T KOG0198|consen  205 IWSLGCTVVEMLTGKPPWSEFFEEAEALLLIGREDSLPEIPDSLSDEAKDFLRKCFKRDPEKRPTAEELLEH  276 (313)
T ss_pred             hhhcCCEEEeccCCCCcchhhcchHHHHHHHhccCCCCCCCcccCHHHHHHHHHHhhcCcccCcCHHHHhhC
Confidence            99999999999999999987 444444455555555667888999999999999999999999999999864

>KOG0201|consensus

Probab=99.97  E-value=1.5e-30  Score=177.40  Aligned_cols=136  Identities=22%  Similarity=0.345  Sum_probs=116.0

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc-------CCcccCCcccCccccccCCCCCCcchhhH
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ-------RGRCYYPAWMSPEALQKKPGDRNLEACDM   77 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~-------~~~~~~~~~~~pe~~~~~~~~~~~~~~dv   77 (153)
                      .-.++.|||+++.+|++|+..||++..+|.+|+.  |||.+.+.       .+..||+.|||||++.+.   .++.++|+
T Consensus       120 ~l~~l~ylH~~~kiHrDIKaanil~s~~g~vkl~--DfgVa~ql~~~~~rr~tfvGTPfwMAPEVI~~~---~Y~~KADI  194 (467)
T KOG0201|consen  120 VLKGLDYLHSEKKIHRDIKAANILLSESGDVKLA--DFGVAGQLTNTVKRRKTFVGTPFWMAPEVIKQS---GYDTKADI  194 (467)
T ss_pred             HHHHhhhhhhcceecccccccceeEeccCcEEEE--ecceeeeeechhhccccccccccccchhhhccc---cccchhhh
Confidence            4468899999999999999999999999999999  99998333       456899999999999864   45589999


Q ss_pred             HHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581         78 WSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus        78 ~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      ||+|++.+||.+|.+|+....++.....+. +...+.....+++.+++|+..||..+|+.||++.++++
T Consensus       195 WSLGITaiEla~GePP~s~~hPmrvlflIp-k~~PP~L~~~~S~~~kEFV~~CL~k~P~~RpsA~~LLK  262 (467)
T KOG0201|consen  195 WSLGITAIELAKGEPPHSKLHPMRVLFLIP-KSAPPRLDGDFSPPFKEFVEACLDKNPEFRPSAKELLK  262 (467)
T ss_pred             hhhhHHHHHHhcCCCCCcccCcceEEEecc-CCCCCccccccCHHHHHHHHHHhhcCcccCcCHHHHhh
Confidence            999999999999999999888876654433 33344445578999999999999999999999999975

>KOG0598|consensus

Probab=99.97  E-value=1.6e-30  Score=173.97  Aligned_cols=130  Identities=25%  Similarity=0.283  Sum_probs=112.7

Q ss_pred             chhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccc-------ccCCcccCCcccCccccccCCCCCCcchhh
Q psy12581          4 KKIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSF-------QQRGRCYYPAWMSPEALQKKPGDRNLEACD   76 (153)
Q Consensus         4 ~~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~-------~~~~~~~~~~~~~pe~~~~~~~~~~~~~~d   76 (153)
                      ....|+.|||++||+++|++++||++|.+|++++.  |||++.       ...+.|||+.|||||++.+..   ++..+|
T Consensus       133 Ei~lAL~~LH~~gIiyRDlKPENILLd~~GHi~Lt--DFgL~k~~~~~~~~t~tfcGT~eYmAPEil~~~g---y~~~vD  207 (357)
T KOG0598|consen  133 EIVLALGYLHSKGIIYRDLKPENILLDEQGHIKLT--DFGLCKEDLKDGDATRTFCGTPEYMAPEILLGKG---YDKAVD  207 (357)
T ss_pred             HHHHHHHHHHhCCeeeccCCHHHeeecCCCcEEEe--ccccchhcccCCCccccccCCccccChHHHhcCC---CCcccc
Confidence            34678999999999999999999999999999999  999984       234569999999999998764   458999


Q ss_pred             HHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCC
Q psy12581         77 MWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRP  139 (153)
Q Consensus        77 v~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp  139 (153)
                      .||+|+++|+|++|.+||.+.+......++.... ....|.-.+.+.+++++++|..+|++|.
T Consensus       208 WWsLGillYeML~G~pPF~~~~~~~~~~~I~~~k-~~~~p~~ls~~ardll~~LL~rdp~~RL  269 (357)
T KOG0598|consen  208 WWSLGILLYEMLTGKPPFYAEDVKKMYDKILKGK-LPLPPGYLSEEARDLLKKLLKRDPRQRL  269 (357)
T ss_pred             hHhHHHHHHHHhhCCCCCcCccHHHHHHHHhcCc-CCCCCccCCHHHHHHHHHHhccCHHHhc
Confidence            9999999999999999999988887777776554 2334555899999999999999999996

>PHA02988 hypothetical protein; Provisional

Probab=99.96  E-value=1e-29  Score=172.00  Aligned_cols=147  Identities=18%  Similarity=0.224  Sum_probs=121.4

Q ss_pred             cchhhHHhhhhc-CCCCCCCeeeeeeeeccccchhhccccccccccc----CCcccCCcccCccccccCCCCCCcchhhH
Q psy12581          3 KKKIVYSFYLNS-KKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ----RGRCYYPAWMSPEALQKKPGDRNLEACDM   77 (153)
Q Consensus         3 ~~~~~~~~~lh~-~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~----~~~~~~~~~~~pe~~~~~~~~~~~~~~dv   77 (153)
                      .+...+..|||+ .++.|+||.+.||+++.++.+|+.  |||++...    ....++..|+|||.+.+. ...++.++|+
T Consensus       129 ~~i~~~l~~lH~~~~~~Hrdlkp~nill~~~~~~kl~--dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~k~Di  205 (283)
T PHA02988        129 IDCCKGLYNLYKYTNKPYKNLTSVSFLVTENYKLKII--CHGLEKILSSPPFKNVNFMVYFSYKMLNDI-FSEYTIKDDI  205 (283)
T ss_pred             HHHHHHHHHHHhcCCCCCCcCChhhEEECCCCcEEEc--ccchHhhhccccccccCcccccCHHHhhhc-cccccchhhh
Confidence            345567889997 488999999999999999999988  99987532    234578899999998642 1245689999


Q ss_pred             HHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHhhhh
Q psy12581         78 WSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKMK  152 (153)
Q Consensus        78 ~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~~~~  152 (153)
                      ||||+++|++++|+.||.+.........+......+..|...+..+.+++.+||+.||++|||+.++++.|+.++
T Consensus       206 ~SlGvil~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~l~~~~  280 (283)
T PHA02988        206 YSLGVVLWEIFTGKIPFENLTTKEIYDLIINKNNSLKLPLDCPLEIKCIVEACTSHDSIKRPNIKEILYNLSLYK  280 (283)
T ss_pred             hHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCCCCCCcCcHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHH
Confidence            999999999999999998877666655555555566667678899999999999999999999999999999875

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=99.96  E-value=1.4e-29  Score=175.17  Aligned_cols=144  Identities=24%  Similarity=0.400  Sum_probs=116.5

Q ss_pred             chhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc---------CCcccCCcccCccccccCCCCCCcch
Q psy12581          4 KKIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ---------RGRCYYPAWMSPEALQKKPGDRNLEA   74 (153)
Q Consensus         4 ~~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~---------~~~~~~~~~~~pe~~~~~~~~~~~~~   74 (153)
                      ...-++.|||++++.|+||++.||+++.++.+|+.  |||++...         ....++..|++||.+.+.   .++.+
T Consensus       182 qi~~aL~~LH~~~ivHrDiKp~Nil~~~~~~~kl~--DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~  256 (338)
T cd05102         182 QVARGMEFLASRKCIHRDLAARNILLSENNVVKIC--DFGLARDIYKDPDYVRKGSARLPLKWMAPESIFDK---VYTTQ  256 (338)
T ss_pred             HHHHHHHHHHHCCEECCCCccceEEEcCCCcEEEe--ecccccccccCcchhcccCCCCCccccCcHHhhcC---CCCcc
Confidence            44567899999999999999999999999988888  99988432         122345689999998754   34588


Q ss_pred             hhHHHHHHHHHHHHh-CCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHhhhh
Q psy12581         75 CDMWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKMK  152 (153)
Q Consensus        75 ~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~~~~  152 (153)
                      +|+||+|+++|++++ |..||.+.............+.....+...+..+.+++.+||+.||++|||+.++++.|+++.
T Consensus       257 sDiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~el~~~l~~~~  335 (338)
T cd05102         257 SDVWSFGVLLWEIFSLGASPYPGVQINEEFCQRLKDGTRMRAPENATPEIYRIMLACWQGDPKERPTFSALVEILGDLL  335 (338)
T ss_pred             cCHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence            999999999999997 999998765444444444444455556778899999999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>KOG0616|consensus

Probab=99.96  E-value=4.2e-30  Score=168.01  Aligned_cols=128  Identities=24%  Similarity=0.351  Sum_probs=115.0

Q ss_pred             chhhHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccccC----CcccCCcccCccccccCCCCCCcchhhHHH
Q psy12581          4 KKIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQR----GRCYYPAWMSPEALQKKPGDRNLEACDMWS   79 (153)
Q Consensus         4 ~~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~----~~~~~~~~~~pe~~~~~~~~~~~~~~dv~s   79 (153)
                      ....|++|||+++|..+++++.|+++|.+|++|+.  |||++....    +.||||.|+|||.+...+++   .++|.|+
T Consensus       152 eivlAleylH~~~iiYRDLKPENiLlD~~G~iKit--DFGFAK~v~~rT~TlCGTPeYLAPEii~sk~yn---kavDWWa  226 (355)
T KOG0616|consen  152 EIVLALEYLHSLDIIYRDLKPENLLLDQNGHIKIT--DFGFAKRVSGRTWTLCGTPEYLAPEIIQSKGYN---KAVDWWA  226 (355)
T ss_pred             HHHHHHHHHHhcCeeeccCChHHeeeccCCcEEEE--eccceEEecCcEEEecCCccccChHHhhcCCCC---cchhHHH
Confidence            45789999999999999999999999999999999  999996554    34999999999999986554   7899999


Q ss_pred             HHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCC
Q psy12581         80 FAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKR  138 (153)
Q Consensus        80 ~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~R  138 (153)
                      ||+++|||+.|.+||...++.....+++...+  .+|..+++.+.++++++|+.|-.+|
T Consensus       227 lGVLIYEMlaG~pPF~~~~~~~iY~KI~~~~v--~fP~~fs~~~kdLl~~LL~vD~t~R  283 (355)
T KOG0616|consen  227 LGVLIYEMLAGYPPFYDDNPIQIYEKILEGKV--KFPSYFSSDAKDLLKKLLQVDLTKR  283 (355)
T ss_pred             HHHHHHHHHcCCCCCcCCChHHHHHHHHhCcc--cCCcccCHHHHHHHHHHHhhhhHhh
Confidence            99999999999999999999888888887754  4588999999999999999999988

>KOG0592|consensus

Probab=99.96  E-value=1.8e-29  Score=176.09  Aligned_cols=134  Identities=19%  Similarity=0.236  Sum_probs=117.2

Q ss_pred             hhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc--------------------CCcccCCcccCcccccc
Q psy12581          6 IVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ--------------------RGRCYYPAWMSPEALQK   65 (153)
Q Consensus         6 ~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~--------------------~~~~~~~~~~~pe~~~~   65 (153)
                      .-+.+|||++||+|+||++.||++|.+++++|.  |||.+...                    ....||..|.+||++..
T Consensus       184 ldAleylH~~GIIHRDlKPENILLd~dmhikIT--DFGsAK~l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~  261 (604)
T KOG0592|consen  184 LDALEYLHSNGIIHRDLKPENILLDKDGHIKIT--DFGSAKILSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLND  261 (604)
T ss_pred             HHHHHHHHhcCceeccCChhheeEcCCCcEEEe--eccccccCChhhccccCccCcccccCcccceeeeecccCHHHhcC
Confidence            447899999999999999999999999999988  99988211                    23579999999999986


Q ss_pred             CCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHH
Q psy12581         66 KPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVL  145 (153)
Q Consensus        66 ~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l  145 (153)
                      .   ..+..+|+|+|||++|.|+.|++||.+.++-..+++++.-.  ..+|+.+++.+.++++++|..||++|+++++|.
T Consensus       262 ~---~~~~~sDiWAlGCilyQmlaG~PPFra~NeyliFqkI~~l~--y~fp~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk  336 (604)
T KOG0592|consen  262 S---PAGPSSDLWALGCILYQMLAGQPPFRAANEYLIFQKIQALD--YEFPEGFPEDARDLIKKLLVRDPSDRLTSQQIK  336 (604)
T ss_pred             C---CCCcccchHHHHHHHHHHhcCCCCCccccHHHHHHHHHHhc--ccCCCCCCHHHHHHHHHHHccCccccccHHHHh
Confidence            4   44588999999999999999999999999888888887554  455888999999999999999999999998886


Q ss_pred             H
Q psy12581        146 P  146 (153)
Q Consensus       146 ~  146 (153)
                      +
T Consensus       337 ~  337 (604)
T KOG0592|consen  337 A  337 (604)
T ss_pred             h
Confidence            5

>KOG0694|consensus

Probab=99.96  E-value=1e-29  Score=181.16  Aligned_cols=132  Identities=21%  Similarity=0.302  Sum_probs=118.2

Q ss_pred             cchhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccc-------ccCCcccCCcccCccccccCCCCCCcchh
Q psy12581          3 KKKIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSF-------QQRGRCYYPAWMSPEALQKKPGDRNLEAC   75 (153)
Q Consensus         3 ~~~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~-------~~~~~~~~~~~~~pe~~~~~~~~~~~~~~   75 (153)
                      .....++.|||++||+.+|++++||++|.+|++||.  |||++.       .+++.||||.|+|||++...   .++...
T Consensus       475 Aev~l~L~fLH~~~IIYRDlKLdNiLLD~eGh~kiA--DFGlcKe~m~~g~~TsTfCGTpey~aPEil~e~---~Yt~aV  549 (694)
T KOG0694|consen  475 AEVVLGLQFLHENGIIYRDLKLDNLLLDTEGHVKIA--DFGLCKEGMGQGDRTSTFCGTPEFLAPEVLTEQ---SYTRAV  549 (694)
T ss_pred             HHHHHHHHHHHhcCceeeecchhheEEcccCcEEec--ccccccccCCCCCccccccCChhhcChhhhccC---cccchh
Confidence            345788999999999999999999999999999999  999983       33567999999999999875   456899


Q ss_pred             hHHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCH
Q psy12581         76 DMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTF  141 (153)
Q Consensus        76 dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~  141 (153)
                      |.|+||+++|||+.|+.||.+.+.++....++...  ..+|..++.+..++++++|..+|++|..+
T Consensus       550 DWW~lGVLlyeML~Gq~PF~gddEee~FdsI~~d~--~~yP~~ls~ea~~il~~ll~k~p~kRLG~  613 (694)
T KOG0694|consen  550 DWWGLGVLLYEMLVGESPFPGDDEEEVFDSIVNDE--VRYPRFLSKEAIAIMRRLLRKNPEKRLGS  613 (694)
T ss_pred             hHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHhcCC--CCCCCcccHHHHHHHHHHhccCcccccCC
Confidence            99999999999999999999999999888887664  45588999999999999999999999854

>KOG0582|consensus

Probab=99.96  E-value=2.8e-29  Score=171.74  Aligned_cols=137  Identities=26%  Similarity=0.364  Sum_probs=111.8

Q ss_pred             hHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccc----------c-CCcccCCcccCccccccCCCCCCcchh
Q psy12581          7 VYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQ----------Q-RGRCYYPAWMSPEALQKKPGDRNLEAC   75 (153)
Q Consensus         7 ~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~----------~-~~~~~~~~~~~pe~~~~~~~~~~~~~~   75 (153)
                      =++.|||++|-+|+||+..||+|+.+|.+|+.  |||.+-.          . ....|+++||+||++...- ..++-++
T Consensus       137 kaL~YLH~~G~IHRdvKAgnILi~~dG~VkLa--dFgvsa~l~~~G~R~~~rf~tfvgtp~wmAPEvl~q~~-~GYdfKa  213 (516)
T KOG0582|consen  137 KALDYLHQNGHIHRDVKAGNILIDSDGTVKLA--DFGVSASLFDSGDRQVTRFNTFVGTPCWMAPEVLMQQL-HGYDFKA  213 (516)
T ss_pred             HHHHHHHhcCceecccccccEEEcCCCcEEEc--CceeeeeecccCceeeEeeccccCcccccChHHhhhcc-cCccchh
Confidence            36889999999999999999999999999999  9987611          1 4558999999999965432 3577899


Q ss_pred             hHHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccC--------CCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581         76 DMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRIT--------IPPGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus        76 dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      |+||||++..|+.+|..||....+.+.+...++......        .....++.+++++..||+.||++|||++++++
T Consensus       214 DIwSfGITA~ELA~G~aPf~k~pPmkvLl~tLqn~pp~~~t~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlk  292 (516)
T KOG0582|consen  214 DIWSFGITACELAHGHAPFSKYPPMKVLLLTLQNDPPTLLTSGLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLK  292 (516)
T ss_pred             hhhhhhHHHHHHhcCCCCcccCChHHHHHHHhcCCCCCcccccCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhc
Confidence            999999999999999999999888887665554432110        11235678999999999999999999999974

>KOG0591|consensus

Probab=99.96  E-value=3.1e-29  Score=163.32  Aligned_cols=133  Identities=20%  Similarity=0.275  Sum_probs=108.3

Q ss_pred             hHHhhhhc--CC--CCCCCeeeeeeeeccccchhhccccccccccc-------CCcccCCcccCccccccCCCCCCcchh
Q psy12581          7 VYSFYLNS--KK--SKTSNAFLFCCQIDEDLTARINMADAQFSFQQ-------RGRCYYPAWMSPEALQKKPGDRNLEAC   75 (153)
Q Consensus         7 ~~~~~lh~--~~--i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~-------~~~~~~~~~~~pe~~~~~~~~~~~~~~   75 (153)
                      .|+..+|.  ..  +.|+||++.||+++.+|.+|+.  |||++...       .+..|||+||+||.+...+   ++.++
T Consensus       135 ~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLG--DfGL~r~l~s~~tfA~S~VGTPyYMSPE~i~~~~---Y~~kS  209 (375)
T KOG0591|consen  135 RALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLG--DFGLGRFLSSKTTFAHSLVGTPYYMSPERIHESG---YNFKS  209 (375)
T ss_pred             HHHHHHhccccccceeeccCcchheEEcCCCceeec--cchhHhHhcchhHHHHhhcCCCcccCHHHHhcCC---CCcch
Confidence            35677887  44  7899999999999999999998  99998443       3458999999999999754   45899


Q ss_pred             hHHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCC-CCCCHHHHHHHHHHhcCCCCCCCCHHHHH
Q psy12581         76 DMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIP-PGISSHLSKLIRICMNEDPGKRPTFDMVL  145 (153)
Q Consensus        76 dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~cl~~~p~~Rps~~~~l  145 (153)
                      |+||+||++|||+.-+.||.+.+..+...++.+. -.++.| ...|..+.+++..|+..|++.||+...++
T Consensus       210 DiWslGCllyEMcaL~~PF~g~n~~~L~~KI~qg-d~~~~p~~~YS~~l~~li~~ci~vd~~~RP~t~~~v  279 (375)
T KOG0591|consen  210 DIWSLGCLLYEMCALQSPFYGDNLLSLCKKIEQG-DYPPLPDEHYSTDLRELINMCIAVDPEQRPDTVPYV  279 (375)
T ss_pred             hHHHHHHHHHHHHhcCCCcccccHHHHHHHHHcC-CCCCCcHHHhhhHHHHHHHHHccCCcccCCCcchHH
Confidence            9999999999999999999998766665555543 344456 56889999999999999999999844333

>KOG1026|consensus

Probab=99.96  E-value=2.9e-29  Score=182.35  Aligned_cols=142  Identities=25%  Similarity=0.416  Sum_probs=123.4

Q ss_pred             chhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc---------CCcccCCcccCccccccCCCCCCcch
Q psy12581          4 KKIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ---------RGRCYYPAWMSPEALQKKPGDRNLEA   74 (153)
Q Consensus         4 ~~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~---------~~~~~~~~~~~pe~~~~~~~~~~~~~   74 (153)
                      -.+-..+||-++.+.|+|+..+||+|.++..+||+  |||++...         +...-...||+||.+..   ++|+.+
T Consensus       611 QIAaGM~YLs~~~FVHRDLATRNCLVge~l~VKIs--DfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly---~kFTte  685 (774)
T KOG1026|consen  611 QIAAGMEYLSSHHFVHRDLATRNCLVGENLVVKIS--DFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILY---GKFTTE  685 (774)
T ss_pred             HHHHHHHHHHhCcccccchhhhhceeccceEEEec--ccccchhhhhhhhhcccCCceeeeecCCHHHhhc---Ccccch
Confidence            34556789999999999999999999999999999  99998332         12344568999999985   467799


Q ss_pred             hhHHHHHHHHHHHHh-CCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHhhh
Q psy12581         75 CDMWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKM  151 (153)
Q Consensus        75 ~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~~~  151 (153)
                      +||||+|+++||+++ |+.||.+....+....+.... .++.|+.++.++.++|..||+.+|.+||++.+|-.+|+..
T Consensus       686 SDVWs~GVvLWEIFsyG~QPy~glSn~EVIe~i~~g~-lL~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~  762 (774)
T KOG1026|consen  686 SDVWSFGVVLWEIFSYGKQPYYGLSNQEVIECIRAGQ-LLSCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAW  762 (774)
T ss_pred             hhhhhhhhhhhhhhccccCcccccchHHHHHHHHcCC-cccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHH
Confidence            999999999999998 999999999888877665444 4889999999999999999999999999999999999875

>KOG0983|consensus

Probab=99.96  E-value=1e-28  Score=160.61  Aligned_cols=137  Identities=24%  Similarity=0.345  Sum_probs=110.6

Q ss_pred             hHHhhhhc-CCCCCCCeeeeeeeeccccchhhccccccccccc------CCcccCCcccCccccccCCCCCCcchhhHHH
Q psy12581          7 VYSFYLNS-KKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ------RGRCYYPAWMSPEALQKKPGDRNLEACDMWS   79 (153)
Q Consensus         7 ~~~~~lh~-~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~------~~~~~~~~~~~pe~~~~~~~~~~~~~~dv~s   79 (153)
                      =|+.||.. ++++|+||+++||++|..|.+|++  |||++..+      +...|.+.||+||.+.......+...+||||
T Consensus       202 ~AL~YLKeKH~viHRDvKPSNILlDe~GniKlC--DFGIsGrlvdSkAhtrsAGC~~YMaPERidp~~~~kYDiRaDVWS  279 (391)
T KOG0983|consen  202 KALYYLKEKHGVIHRDVKPSNILLDERGNIKLC--DFGISGRLVDSKAHTRSAGCAAYMAPERIDPPDKPKYDIRADVWS  279 (391)
T ss_pred             HHHHHHHHhcceeecccCccceEEccCCCEEee--cccccceeecccccccccCCccccCccccCCCCCCccchhhhhhh
Confidence            36778875 679999999999999999999999  99998433      3346778999999997655556778999999


Q ss_pred             HHHHHHHHHhCCCCCCCCC-chhhhHHHHhhccccCCC--CCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581         80 FAVLLWELATREVPFADLT-PMEVGMKVALEGLRITIP--PGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus        80 ~g~~~~~~~~g~~p~~~~~-~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      ||++++|+.||+.||.+.+ +.+.+.+++.. ..+..+  ..+++.+++|+..||..|+.+||...++++
T Consensus       280 lGITlveLaTg~yPy~~c~tdFe~ltkvln~-ePP~L~~~~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~  348 (391)
T KOG0983|consen  280 LGITLVELATGQYPYKGCKTDFEVLTKVLNE-EPPLLPGHMGFSPDFQSFVKDCLTKDHRKRPKYNKLLE  348 (391)
T ss_pred             hccchhhhhcccCCCCCCCccHHHHHHHHhc-CCCCCCcccCcCHHHHHHHHHHhhcCcccCcchHHHhc
Confidence            9999999999999998854 44445555543 223333  348999999999999999999999998875

>KOG0588|consensus

Probab=99.96  E-value=6.5e-29  Score=176.86  Aligned_cols=136  Identities=24%  Similarity=0.323  Sum_probs=118.5

Q ss_pred             hhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccc------ccCCcccCCcccCccccccCCCCCCcchhhHHH
Q psy12581          6 IVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSF------QQRGRCYYPAWMSPEALQKKPGDRNLEACDMWS   79 (153)
Q Consensus         6 ~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~------~~~~~~~~~~~~~pe~~~~~~~~~~~~~~dv~s   79 (153)
                      ..+..|+|+.+|.|+|+++.|.++|..+.+||.  |||+|-      .+++.||.|.|.+||++.+.++..  .++||||
T Consensus       122 i~gv~yCH~~~icHRDLKpENlLLd~~~nIKIA--DFGMAsLe~~gklLeTSCGSPHYA~PEIV~G~pYdG--~~sDVWS  197 (786)
T KOG0588|consen  122 LDGVSYCHAFNICHRDLKPENLLLDVKNNIKIA--DFGMASLEVPGKLLETSCGSPHYAAPEIVSGRPYDG--RPSDVWS  197 (786)
T ss_pred             HHHHHHHhhhcceeccCCchhhhhhcccCEeee--ccceeecccCCccccccCCCcccCCchhhcCCCCCC--Cccccch
Confidence            356789999999999999999999999988888  999982      346679999999999999987753  6899999


Q ss_pred             HHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHH
Q psy12581         80 FAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPI  147 (153)
Q Consensus        80 ~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~  147 (153)
                      .|+++|.+++|+.||.+.+....+.++..+  ....|.+++.++++++.+|+..||+.|.|.++|++.
T Consensus       198 CGVILfALLtG~LPFdDdNir~LLlKV~~G--~f~MPs~Is~eaQdLLr~ml~VDp~~RiT~~eI~kH  263 (786)
T KOG0588|consen  198 CGVILFALLTGKLPFDDDNIRVLLLKVQRG--VFEMPSNISSEAQDLLRRMLDVDPSTRITTEEILKH  263 (786)
T ss_pred             hHHHHHHHHhCCCCCCCccHHHHHHHHHcC--cccCCCcCCHHHHHHHHHHhccCccccccHHHHhhC
Confidence            999999999999999987777766665544  455689999999999999999999999999999863

>KOG0583|consensus

Probab=99.96  E-value=1.6e-28  Score=170.48  Aligned_cols=134  Identities=25%  Similarity=0.321  Sum_probs=115.3

Q ss_pred             hhHHhhhhcCCCCCCCeeeeeeeeccc-cchhhccccccccccc-------CCcccCCcccCccccccCC-CCCCcchhh
Q psy12581          6 IVYSFYLNSKKSKTSNAFLFCCQIDED-LTARINMADAQFSFQQ-------RGRCYYPAWMSPEALQKKP-GDRNLEACD   76 (153)
Q Consensus         6 ~~~~~~lh~~~i~~~ni~~~~~~~~~~-~~~kl~~~d~g~~~~~-------~~~~~~~~~~~pe~~~~~~-~~~~~~~~d   76 (153)
                      .-+..|+|+++|.|+||++.|++++.+ +.+|+.  |||++...       ...||++.|+|||++.+.. +.  +.++|
T Consensus       130 isav~y~H~~gi~HRDLK~ENilld~~~~~~Kl~--DFG~s~~~~~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~--g~~aD  205 (370)
T KOG0583|consen  130 ISAVAYCHSRGIVHRDLKPENILLDGNEGNLKLS--DFGLSAISPGEDGLLKTFCGSPAYAAPEVLSGKGTYS--GKAAD  205 (370)
T ss_pred             HHHHHHHHhCCEeeCCCCHHHEEecCCCCCEEEe--ccccccccCCCCCcccCCCCCcccCCHHHhCCCCCcC--Cchhh
Confidence            347899999999999999999999999 888988  99998533       3569999999999998865 33  47899


Q ss_pred             HHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCCCCC-CHHHHHHHHHHhcCCCCCCCCHHHHH
Q psy12581         77 MWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGI-SSHLSKLIRICMNEDPGKRPTFDMVL  145 (153)
Q Consensus        77 v~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~cl~~~p~~Rps~~~~l  145 (153)
                      +||+|+++|.|++|..||...+......++...  ....|... ++++..++++||..+|.+|+++.+++
T Consensus       206 vWS~GViLy~ml~G~~PF~d~~~~~l~~ki~~~--~~~~p~~~~S~~~~~Li~~mL~~~P~~R~t~~~i~  273 (370)
T KOG0583|consen  206 VWSLGVILYVLLCGRLPFDDSNVPNLYRKIRKG--EFKIPSYLLSPEARSLIEKMLVPDPSTRITLLEIL  273 (370)
T ss_pred             hhhhHHHHHHHHhCCCCCCCccHHHHHHHHhcC--CccCCCCcCCHHHHHHHHHHcCCCcccCCCHHHHh
Confidence            999999999999999999987766666664433  45667777 99999999999999999999999998

>KOG0599|consensus

Probab=99.96  E-value=6.4e-29  Score=161.64  Aligned_cols=137  Identities=22%  Similarity=0.311  Sum_probs=117.3

Q ss_pred             HHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc------CCcccCCcccCccccccC---CCCCCcchhhHH
Q psy12581          8 YSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ------RGRCYYPAWMSPEALQKK---PGDRNLEACDMW   78 (153)
Q Consensus         8 ~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~------~~~~~~~~~~~pe~~~~~---~~~~~~~~~dv~   78 (153)
                      ...|||.++|.|+|+++.||+.|++..++++  |||++.+.      ...||||+|+|||.+...   .+..++...|.|
T Consensus       135 gVeylHa~~IVHRDLKpENILlddn~~i~is--DFGFa~~l~~GekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~W  212 (411)
T KOG0599|consen  135 GVEYLHARNIVHRDLKPENILLDDNMNIKIS--DFGFACQLEPGEKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEW  212 (411)
T ss_pred             HHHHHHHhhhhhcccChhheeeccccceEEe--ccceeeccCCchhHHHhcCCCcccChhheeeecccCCCCccchhhHH
Confidence            4689999999999999999999999999998  99999654      345999999999998632   334577899999


Q ss_pred             HHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCCC--CCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581         79 SFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPP--GISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus        79 s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      +.|+++|.++.|.+||......-.+..+....+....|.  +.+....+++++||+.||++|.|++++++
T Consensus       213 a~GVImyTLLaGcpPFwHRkQmlMLR~ImeGkyqF~speWadis~~~KdLIsrlLqVdp~~Ritake~La  282 (411)
T KOG0599|consen  213 ACGVIMYTLLAGCPPFWHRKQMLMLRMIMEGKYQFRSPEWADISATVKDLISRLLQVDPTKRITAKEALA  282 (411)
T ss_pred             HHHHHHHHHHcCCCchhHHHHHHHHHHHHhcccccCCcchhhccccHHHHHHHHHeeCchhcccHHHHhc
Confidence            999999999999999988777666667777777665554  57889999999999999999999999874

>KOG0193|consensus

Probab=99.95  E-value=2.9e-29  Score=176.99  Aligned_cols=144  Identities=20%  Similarity=0.300  Sum_probs=114.9

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccc---------cCCcccCCcccCccccccCCCCCCcchh
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQ---------QRGRCYYPAWMSPEALQKKPGDRNLEAC   75 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~---------~~~~~~~~~~~~pe~~~~~~~~~~~~~~   75 (153)
                      .+-...|||.++|+|+|++..||++.+++.+||.  |||++..         .....+...|||||+++.+....++..+
T Consensus       497 iaqGM~YLHAK~IIHrDLKSnNIFl~~~~kVkIg--DFGLatvk~~w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qS  574 (678)
T KOG0193|consen  497 IAQGMDYLHAKNIIHRDLKSNNIFLHEDLKVKIG--DFGLATVKTRWSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQS  574 (678)
T ss_pred             HHHhhhhhhhhhhhhhhccccceEEccCCcEEEe--cccceeeeeeeccccccCCCccchhhhcHHHHhhcccCCCCccc
Confidence            4456789999999999999999999999877776  9999822         2334677899999999877667788999


Q ss_pred             hHHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccC----CCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHhhh
Q psy12581         76 DMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRIT----IPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKM  151 (153)
Q Consensus        76 dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~~~  151 (153)
                      |||+||+++||+++|..||.......++. .+..++..+    .-..+++++.+++..||.++++.||.+.+++..|+.+
T Consensus       575 DVYaFGiV~YELltg~lPysi~~~dqIif-mVGrG~l~pd~s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l  653 (678)
T KOG0193|consen  575 DVYAFGIVWYELLTGELPYSIQNRDQIIF-MVGRGYLMPDLSKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEEL  653 (678)
T ss_pred             chhhhhHHHHHHHhCcCCcCCCChhheEE-EecccccCccchhhhccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHh
Confidence            99999999999999999998544444333 233332221    2245677999999999999999999999999977665

>KOG4721|consensus

Probab=99.95  E-value=1.8e-29  Score=177.81  Aligned_cols=141  Identities=28%  Similarity=0.450  Sum_probs=122.7

Q ss_pred             hhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc------CCcccCCcccCccccccCCCCCCcchhhHHH
Q psy12581          6 IVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ------RGRCYYPAWMSPEALQKKPGDRNLEACDMWS   79 (153)
Q Consensus         6 ~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~------~~~~~~~~~~~pe~~~~~~~~~~~~~~dv~s   79 (153)
                      +-...|||.+.|+|+|++.-||+|+.+..+||+  |||.+...      -.++||..|||||+++..+.+   .+.||||
T Consensus       222 A~GM~YLH~hKIIHRDLKSPNiLIs~~d~VKIs--DFGTS~e~~~~STkMSFaGTVaWMAPEvIrnePcs---EKVDIwS  296 (904)
T KOG4721|consen  222 AGGMNYLHLHKIIHRDLKSPNILISYDDVVKIS--DFGTSKELSDKSTKMSFAGTVAWMAPEVIRNEPCS---EKVDIWS  296 (904)
T ss_pred             hhhhHHHHHhhHhhhccCCCceEeeccceEEec--cccchHhhhhhhhhhhhhhhHhhhCHHHhhcCCcc---cccceeh
Confidence            345689999999999999999999999999999  99988433      235899999999999986554   8999999


Q ss_pred             HHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHhhh
Q psy12581         80 FAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKM  151 (153)
Q Consensus        80 ~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~~~  151 (153)
                      ||+++|||+||..||.......+...+-...+.++.|..++..+.-++++||...|..||++.+++..|+-.
T Consensus       297 fGVVLWEmLT~EiPYkdVdssAIIwGVGsNsL~LpvPstcP~GfklL~Kqcw~sKpRNRPSFrqil~HldIa  368 (904)
T KOG4721|consen  297 FGVVLWEMLTGEIPYKDVDSSAIIWGVGSNSLHLPVPSTCPDGFKLLLKQCWNSKPRNRPSFRQILLHLDIA  368 (904)
T ss_pred             hHHHHHHHHhcCCCccccchheeEEeccCCcccccCcccCchHHHHHHHHHHhcCCCCCccHHHHHHHHhhc
Confidence            999999999999999887776666555556668889999999999999999999999999999999988643

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=99.95  E-value=2.8e-28  Score=170.72  Aligned_cols=144  Identities=19%  Similarity=0.362  Sum_probs=116.2

Q ss_pred             chhhHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccccC---------CcccCCcccCccccccCCCCCCcch
Q psy12581          4 KKIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQR---------GRCYYPAWMSPEALQKKPGDRNLEA   74 (153)
Q Consensus         4 ~~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~---------~~~~~~~~~~pe~~~~~~~~~~~~~   74 (153)
                      ...-++.|||++++.|+||++.||+++.++.+++.  |||++....         ...++..|++||.+.+.   .++.+
T Consensus       220 qi~~aL~yLH~~giiHrDLkp~Nil~~~~~~~kL~--DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~  294 (374)
T cd05106         220 QVAQGMDFLASKNCIHRDVAARNVLLTDGRVAKIC--DFGLARDIMNDSNYVVKGNARLPVKWMAPESIFDC---VYTVQ  294 (374)
T ss_pred             HHHHHHHHHHHCCEEeccCchheEEEeCCCeEEEe--eceeeeeccCCcceeeccCCCCccceeCHHHhcCC---CCCcc
Confidence            34567899999999999999999999999988888  999974321         12234579999998653   45588


Q ss_pred             hhHHHHHHHHHHHHh-CCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHhhhh
Q psy12581         75 CDMWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKMK  152 (153)
Q Consensus        75 ~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~~~~  152 (153)
                      +|+||+|+++|++++ |+.||...............+.....+...++++.+++.+||+.+|++|||+.++++.|+++.
T Consensus       295 ~DvwSlGvil~ellt~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~l~~~l~~~~  373 (374)
T cd05106         295 SDVWSYGILLWEIFSLGKSPYPGILVNSKFYKMVKRGYQMSRPDFAPPEIYSIMKMCWNLEPTERPTFSQISQLIQRQL  373 (374)
T ss_pred             ccHHHHHHHHHHHHhCCCCCCccccccHHHHHHHHcccCccCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHh
Confidence            999999999999997 999998765544444444444455556667899999999999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=99.95  E-value=1.1e-27  Score=161.93  Aligned_cols=140  Identities=26%  Similarity=0.380  Sum_probs=114.6

Q ss_pred             hhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc---------CCcccCCcccCccccccCCCCCCcchhh
Q psy12581          6 IVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ---------RGRCYYPAWMSPEALQKKPGDRNLEACD   76 (153)
Q Consensus         6 ~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~---------~~~~~~~~~~~pe~~~~~~~~~~~~~~d   76 (153)
                      .-++.|||++++.|+||.+.||+++.++.+++.  |||++...         ....+++.|+|||.+.+.   ..+.++|
T Consensus       134 ~~al~~lH~~~i~H~dlkp~Nil~~~~~~~~L~--dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~sD  208 (283)
T cd05048         134 AAGMEYLSSHHFVHRDLAARNCLVGEGLTVKIS--DFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYG---KFTTESD  208 (283)
T ss_pred             HHHHHHHHhCCeeccccccceEEEcCCCcEEEC--CCcceeeccccccccccCCCcccccccCHHHhccC---cCchhhh
Confidence            456789999999999999999999999988888  99987432         223456789999988653   3558899


Q ss_pred             HHHHHHHHHHHHh-CCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHhhh
Q psy12581         77 MWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKM  151 (153)
Q Consensus        77 v~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~~~  151 (153)
                      +||+|+++|++++ |..||.+....+.... +..+.....+...+..+.+++.+||+.+|++||++.++++.|+.+
T Consensus       209 v~slG~il~el~~~g~~p~~~~~~~~~~~~-i~~~~~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~~  283 (283)
T cd05048         209 IWSFGVVLWEIFSYGLQPYYGFSNQEVIEM-IRSRQLLPCPEDCPARVYALMIECWNEIPARRPRFKDIHTRLRSW  283 (283)
T ss_pred             HHHHHHHHHHHHcCCCCCCCCCCHHHHHHH-HHcCCcCCCcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhcC
Confidence            9999999999998 9999988766554433 334445556777899999999999999999999999999999753

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=99.95  E-value=8e-28  Score=166.36  Aligned_cols=143  Identities=24%  Similarity=0.374  Sum_probs=115.7

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc---------CCcccCCcccCccccccCCCCCCcchh
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ---------RGRCYYPAWMSPEALQKKPGDRNLEAC   75 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~---------~~~~~~~~~~~pe~~~~~~~~~~~~~~   75 (153)
                      .+-++.|||++++.|+||++.||+++.++.++|.  |||++...         ....++..|++||.+.+.   .++.++
T Consensus       182 i~~aL~~lH~~~ivHrDikp~Nill~~~~~vkL~--DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~  256 (337)
T cd05054         182 VARGMEFLASRKCIHRDLAARNILLSENNVVKIC--DFGLARDIYKDPDYVRKGDARLPLKWMAPESIFDK---VYTTQS  256 (337)
T ss_pred             HHHHHHHHHhCCeecCCCCcceEEEeCCCcEEEe--ccccchhcccCcchhhccCCCCCccccCcHHhcCC---CCCccc
Confidence            4567899999999999999999999999988887  99988432         122345679999998764   455889


Q ss_pred             hHHHHHHHHHHHHh-CCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHhhhh
Q psy12581         76 DMWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKMK  152 (153)
Q Consensus        76 dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~~~~  152 (153)
                      |+||+|++++++++ |..||.+....+........+.....+...+..+.+++.+||+.+|++||++.++++.|+++.
T Consensus       257 Di~SlGv~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~ell~~l~~~~  334 (337)
T cd05054         257 DVWSFGVLLWEIFSLGASPYPGVQIDEEFCRRLKEGTRMRAPEYATPEIYSIMLDCWHNNPEDRPTFSELVEILGDLL  334 (337)
T ss_pred             cHHHHHHHHHHHHHcCCCCCCCCCccHHHHHHHhccCCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence            99999999999997 999997755444444444444455556677889999999999999999999999999998864

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>KOG1095|consensus

Probab=99.95  E-value=2.8e-28  Score=182.44  Aligned_cols=145  Identities=27%  Similarity=0.446  Sum_probs=125.5

Q ss_pred             CccchhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc--------CCc-ccCCcccCccccccCCCCCC
Q psy12581          1 MKKKKIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ--------RGR-CYYPAWMSPEALQKKPGDRN   71 (153)
Q Consensus         1 ~~~~~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~--------~~~-~~~~~~~~pe~~~~~~~~~~   71 (153)
                      +|+|.+=..+||+++.++|+||..+||+++....+||.  |||++...        ... .....||+||.+..   ..+
T Consensus       807 ~a~dvA~G~~YLe~~~fvHRDLAaRNCLL~~~r~VKIa--DFGlArDiy~~~yyr~~~~a~lPvkWm~PEsl~d---~iF  881 (1025)
T KOG1095|consen  807 FALDVAKGMNYLESKHFVHRDLAARNCLLDERRVVKIA--DFGLARDIYDKDYYRKHGEAMLPVKWMPPESLKD---GIF  881 (1025)
T ss_pred             HHHHHhhhhHHHHhCCCcCcchhhhheeecccCcEEEc--ccchhHhhhhchheeccCccccceecCCHHHHhh---ccc
Confidence            35677778899999999999999999999999988988  99999422        112 33458999999986   367


Q ss_pred             cchhhHHHHHHHHHHHHh-CCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHhh
Q psy12581         72 LEACDMWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDK  150 (153)
Q Consensus        72 ~~~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~~  150 (153)
                      +.++||||||+++||++| |..||.+.+..+........+ +++.|..++..+.++|.+||..+|++||++..+++.++.
T Consensus       882 tskSDvWsFGVllWEifslG~~PY~~~~n~~v~~~~~~gg-RL~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~  960 (1025)
T KOG1095|consen  882 TSKSDVWSFGVLLWEIFSLGATPYPSRSNFEVLLDVLEGG-RLDPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPA  960 (1025)
T ss_pred             ccccchhhhHHHHHHHHhCCCCCCCCcchHHHHHHHHhCC-ccCCCCCCChHHHHHHHHHccCChhhCccHHHHHhhhhh
Confidence            799999999999999998 999999999888877666555 888999999999999999999999999999999998776


Q ss_pred             h
Q psy12581        151 M  151 (153)
Q Consensus       151 ~  151 (153)
                      +
T Consensus       961 i  961 (1025)
T KOG1095|consen  961 I  961 (1025)
T ss_pred             h
Confidence            5

>KOG0597|consensus

Probab=99.95  E-value=2.5e-28  Score=171.72  Aligned_cols=137  Identities=19%  Similarity=0.295  Sum_probs=118.8

Q ss_pred             cchhhHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccccC-------CcccCCcccCccccccCCCCCCcchh
Q psy12581          3 KKKIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQR-------GRCYYPAWMSPEALQKKPGDRNLEAC   75 (153)
Q Consensus         3 ~~~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~-------~~~~~~~~~~pe~~~~~~~~~~~~~~   75 (153)
                      -+-+.+++|||+.+|.|+++++.||+++++|++|++  |||++..++       ...|||.||+||.+.+.++   +..+
T Consensus       107 ~~LVsaL~yLhs~rilhrd~kPqniLl~~~~~~Klc--dFg~Ar~m~~~t~vltsikGtPlYmAPElv~e~py---d~~s  181 (808)
T KOG0597|consen  107 YDLVSALYYLHSNRILHRDMKPQNILLEKGGTLKLC--DFGLARAMSTNTSVLTSIKGTPLYMAPELVEEQPY---DHTS  181 (808)
T ss_pred             HHHHHHHHHHHhcCcccccCCcceeeecCCCceeec--hhhhhhhcccCceeeeeccCcccccCHHHHcCCCc---cchh
Confidence            356778999999999999999999999999999999  999995543       3479999999999997654   4889


Q ss_pred             hHHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581         76 DMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus        76 dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      |.||+||++||+.+|++||....-......+..++..+  |...+..+..++..+|..||.+|.+..+++.
T Consensus       182 DlWslGcilYE~~~G~PPF~a~si~~Lv~~I~~d~v~~--p~~~S~~f~nfl~gLL~kdP~~RltW~~Ll~  250 (808)
T KOG0597|consen  182 DLWSLGCILYELYVGQPPFYARSITQLVKSILKDPVKP--PSTASSSFVNFLQGLLIKDPAQRLTWTDLLG  250 (808)
T ss_pred             hHHHHHHHHHHHhcCCCCchHHHHHHHHHHHhcCCCCC--cccccHHHHHHHHHHhhcChhhcccHHHHhc
Confidence            99999999999999999998877666666666665444  6688999999999999999999999998864

>KOG4645|consensus

Probab=99.95  E-value=6.2e-29  Score=187.04  Aligned_cols=139  Identities=22%  Similarity=0.275  Sum_probs=121.7

Q ss_pred             hHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccccC-----------CcccCCcccCccccccCCCCCCcchh
Q psy12581          7 VYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQR-----------GRCYYPAWMSPEALQKKPGDRNLEAC   75 (153)
Q Consensus         7 ~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~-----------~~~~~~~~~~pe~~~~~~~~~~~~~~   75 (153)
                      ....|||+.||.|++|++.||+++.+|.+|+.  |||.+....           .-.||+.|||||++.+.+......+.
T Consensus      1345 ~gla~LH~~gIVHRDIK~aNI~Ld~~g~iK~~--DFGsa~ki~~~~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~ 1422 (1509)
T KOG4645|consen 1345 EGLAYLHEHGIVHRDIKPANILLDFNGLIKYG--DFGSAVKIKNNAQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAA 1422 (1509)
T ss_pred             HHHHHHHhcCceecCCCccceeeecCCcEEee--cccceeEecCchhcCCHHHHhhcCCchhcCchhhcccccCCCCcch
Confidence            35789999999999999999999999999988  999985432           23799999999999887654555789


Q ss_pred             hHHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHH
Q psy12581         76 DMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPI  147 (153)
Q Consensus        76 dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~  147 (153)
                      ||||+||+..||+||+.||...+..-.....+..+-.++.|..++++.++|+..||+.||.+|+++.|+++.
T Consensus      1423 DiWslGCVVlEM~tGkrPW~~~dne~aIMy~V~~gh~Pq~P~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~ 1494 (1509)
T KOG4645|consen 1423 DIWSLGCVVLEMATGKRPWAELDNEWAIMYHVAAGHKPQIPERLSSEGRDFLEHCLEQDPKMRWTASQLLEH 1494 (1509)
T ss_pred             hhhcccceEEEeecCCCchhhccchhHHHhHHhccCCCCCchhhhHhHHHHHHHHHhcCchhhhHHHHHHHh
Confidence            999999999999999999998877766666677778899999999999999999999999999999888763

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=99.95  E-value=1.2e-27  Score=167.66  Aligned_cols=143  Identities=22%  Similarity=0.392  Sum_probs=115.2

Q ss_pred             chhhHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccccC---------CcccCCcccCccccccCCCCCCcch
Q psy12581          4 KKIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQR---------GRCYYPAWMSPEALQKKPGDRNLEA   74 (153)
Q Consensus         4 ~~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~---------~~~~~~~~~~pe~~~~~~~~~~~~~   74 (153)
                      ...-++.|||++++.|+||++.||+++.++.+|+.  |||++....         ...++..|++||.+.+.   .++.+
T Consensus       222 qi~~~l~~lH~~~ivH~Dlkp~Nill~~~~~~kl~--DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~  296 (375)
T cd05104         222 QVAKGMSFLASKNCIHRDLAARNILLTHGRITKIC--DFGLARDIRNDSNYVVKGNARLPVKWMAPESIFNC---VYTFE  296 (375)
T ss_pred             HHHHHHHHHHHCCeeccCCchhhEEEECCCcEEEe--cCccceeccCcccccccCCCCCCcceeChhHhcCC---CCCCC
Confidence            44567899999999999999999999999888888  999874321         12234579999998764   34578


Q ss_pred             hhHHHHHHHHHHHHh-CCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHhhh
Q psy12581         75 CDMWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKM  151 (153)
Q Consensus        75 ~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~~~  151 (153)
                      +|+||+|++++++++ |..||..........+....+.....+...+.++.+++.+||+.||++||++.++++.|++.
T Consensus       297 sDi~slG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~l~~~  374 (375)
T cd05104         297 SDVWSYGILLWEIFSLGSSPYPGMPVDSKFYKMIKEGYRMLSPECAPSEMYDIMKSCWDADPLKRPTFKQIVQLIEQQ  374 (375)
T ss_pred             CCHHHHHHHHHHHHhcCCCCCCCCCchHHHHHHHHhCccCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHhh
Confidence            999999999999997 88999776555544455555555555666788999999999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>KOG0585|consensus

Probab=99.95  E-value=7.6e-28  Score=165.99  Aligned_cols=142  Identities=23%  Similarity=0.230  Sum_probs=121.9

Q ss_pred             chhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc------------CCcccCCcccCccccccCC-CCC
Q psy12581          4 KKIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ------------RGRCYYPAWMSPEALQKKP-GDR   70 (153)
Q Consensus         4 ~~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~------------~~~~~~~~~~~pe~~~~~~-~~~   70 (153)
                      |....++|||..+|+|+||+++|++++.+|.+||+  |||.+...            ....|||.|+|||.+.+.. ...
T Consensus       218 Dvv~GLEYLH~QgiiHRDIKPsNLLl~~~g~VKIs--DFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~  295 (576)
T KOG0585|consen  218 DVVLGLEYLHYQGIIHRDIKPSNLLLSSDGTVKIS--DFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSY  295 (576)
T ss_pred             HHHHHHHHHHhcCeeccccchhheEEcCCCcEEee--ccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccc
Confidence            56678999999999999999999999999999999  99998533            2348999999999998743 223


Q ss_pred             CcchhhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHH
Q psy12581         71 NLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPI  147 (153)
Q Consensus        71 ~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~  147 (153)
                      .+.+.|+|++|+++|-++.|+.||.+....+...+++...+..+........+.+++.+||+.||++|.+..+|...
T Consensus       296 ~g~a~DiWalGVTLYCllfG~~PF~~~~~~~l~~KIvn~pL~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~H  372 (576)
T KOG0585|consen  296 SGFALDIWALGVTLYCLLFGQLPFFDDFELELFDKIVNDPLEFPENPEINEDLKDLIKRLLEKDPEQRITLPDIKLH  372 (576)
T ss_pred             cchhhhhhhhhhhHHHhhhccCCcccchHHHHHHHHhcCcccCCCcccccHHHHHHHHHHhhcChhheeehhhheec
Confidence            35789999999999999999999999988888888888876665555679999999999999999999999887643

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=99.95  E-value=3.6e-27  Score=159.86  Aligned_cols=142  Identities=23%  Similarity=0.375  Sum_probs=114.3

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc---------CCcccCCcccCccccccCCCCCCcchh
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ---------RGRCYYPAWMSPEALQKKPGDRNLEAC   75 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~---------~~~~~~~~~~~pe~~~~~~~~~~~~~~   75 (153)
                      .+-++.|||++++.|+||.+.||+++.++.+++.  |||++...         ....++..|++||.+.+.   .++.++
T Consensus       129 l~~aL~~lH~~~i~H~dlkp~Nili~~~~~~kl~--dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~s  203 (288)
T cd05093         129 IAAGMVYLASQHFVHRDLATRNCLVGENLLVKIG--DFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYR---KFTTES  203 (288)
T ss_pred             HHHHHHHHHhCCeeecccCcceEEEccCCcEEec--cCCccccccCCceeecCCCCCccccccCHHHhccC---CCCchh
Confidence            3456789999999999999999999999988888  99987432         112335679999998753   345789


Q ss_pred             hHHHHHHHHHHHHh-CCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHhhhh
Q psy12581         76 DMWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKMK  152 (153)
Q Consensus        76 dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~~~~  152 (153)
                      |+||+|++++++++ |..||.+.........+. .+.....+...+..+.+++.+||+.+|.+|||++++++.|+++.
T Consensus       204 DiwslG~il~~l~t~g~~p~~~~~~~~~~~~i~-~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~  280 (288)
T cd05093         204 DVWSLGVVLWEIFTYGKQPWYQLSNNEVIECIT-QGRVLQRPRTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLA  280 (288)
T ss_pred             hHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH-cCCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHH
Confidence            99999999999998 899997776555444433 33334445668899999999999999999999999999998874

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=99.95  E-value=3.7e-27  Score=160.01  Aligned_cols=142  Identities=23%  Similarity=0.367  Sum_probs=114.3

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc---------CCcccCCcccCccccccCCCCCCcchh
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ---------RGRCYYPAWMSPEALQKKPGDRNLEAC   75 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~---------~~~~~~~~~~~pe~~~~~~~~~~~~~~   75 (153)
                      ..-+..|||++++.|+||.+.||+++.++.+++.  |||++...         ....++..|++||.+.+.   .++.++
T Consensus       132 i~~al~~lH~~~i~H~dlkp~Nil~~~~~~~~l~--dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~  206 (291)
T cd05094         132 IASGMVYLASQHFVHRDLATRNCLVGANLLVKIG--DFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYR---KFTTES  206 (291)
T ss_pred             HHHHHHHHHhCCeeecccCcceEEEccCCcEEEC--CCCcccccCCCceeecCCCCCcceeecChHHhccC---CCCchh
Confidence            3456789999999999999999999999988888  99987432         122446789999988754   345789


Q ss_pred             hHHHHHHHHHHHHh-CCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHhhhh
Q psy12581         76 DMWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKMK  152 (153)
Q Consensus        76 dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~~~~  152 (153)
                      |+||+|++++++++ |..||........... ...+.....+...+..+.+++.+||+.+|++||++.++++.|+++.
T Consensus       207 Di~slG~il~el~t~g~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~  283 (291)
T cd05094         207 DVWSFGVILWEIFTYGKQPWFQLSNTEVIEC-ITQGRVLERPRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALG  283 (291)
T ss_pred             hHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH-HhCCCCCCCCccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHH
Confidence            99999999999998 9999877665554333 3333344455667889999999999999999999999999998874

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=99.95  E-value=4.5e-28  Score=162.08  Aligned_cols=140  Identities=26%  Similarity=0.406  Sum_probs=111.7

Q ss_pred             cchhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc---------CCcccCCcccCccccccCCCCCCcc
Q psy12581          3 KKKIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ---------RGRCYYPAWMSPEALQKKPGDRNLE   73 (153)
Q Consensus         3 ~~~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~---------~~~~~~~~~~~pe~~~~~~~~~~~~   73 (153)
                      ....-++.|||++++.|+||.++||+++.++.+|++  |||++...         ........|++||.+...   ..+.
T Consensus       110 ~~i~~~l~~Lh~~~iiH~~l~~~nill~~~~~~Kl~--~f~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~---~~~~  184 (259)
T PF07714_consen  110 IQIAEALSYLHSNNIIHGNLSPSNILLDSNGQVKLS--DFGLSRPISEKSKYKNDSSQQLPLRYLAPEVLKDG---EYTK  184 (259)
T ss_dssp             HHHHHHHHHHHHTTEEEST-SGGGEEEETTTEEEEE--STTTGEETTTSSSEEESTTSESGGGGS-HHHHHHS---EESH
T ss_pred             cccccccccccccccccccccccccccccccccccc--ccccccccccccccccccccccccccccccccccc---cccc
Confidence            345678899999999999999999999999999998  99987443         122456689999998764   3568


Q ss_pred             hhhHHHHHHHHHHHHh-CCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHH
Q psy12581         74 ACDMWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPIL  148 (153)
Q Consensus        74 ~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L  148 (153)
                      ++||||||++++|+++ |+.||...........+ ......+.+..++..+.+++.+||..+|++||++.++++.|
T Consensus       185 ksDVysfG~~l~ei~~~~~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~~L  259 (259)
T PF07714_consen  185 KSDVYSFGMLLYEILTLGKFPFSDYDNEEIIEKL-KQGQRLPIPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQEL  259 (259)
T ss_dssp             HHHHHHHHHHHHHHHTTSSGTTTTSCHHHHHHHH-HTTEETTSBTTSBHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred             cccccccccccccccccccccccccccccccccc-cccccceeccchhHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence            9999999999999999 78999887665555444 45556666778899999999999999999999999999876

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=99.95  E-value=4.1e-27  Score=157.17  Aligned_cols=142  Identities=21%  Similarity=0.326  Sum_probs=114.4

Q ss_pred             chhhHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccccC----------CcccCCcccCccccccCCCCCCcc
Q psy12581          4 KKIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQR----------GRCYYPAWMSPEALQKKPGDRNLE   73 (153)
Q Consensus         4 ~~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~----------~~~~~~~~~~pe~~~~~~~~~~~~   73 (153)
                      ...-++.|||.+++.|+||.+.||+++.++.+++.  |||.+....          ...++..|++||.+...   ..+.
T Consensus       103 qi~~al~~lH~~~i~H~dlkp~nill~~~~~~kl~--Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~  177 (257)
T cd05116         103 QVSMGMKYLEETNFVHRDLAARNVLLVTQHYAKIS--DFGLSKALGADENYYKAKTHGKWPVKWYAPECMNYY---KFSS  177 (257)
T ss_pred             HHHHHHHHHHHCCEeecccchhhEEEcCCCeEEEC--CCccccccCCCCCeeeecCCCCCCccccCHhHhccC---CcCc
Confidence            34567899999999999999999999999888888  999874321          11234689999988653   3457


Q ss_pred             hhhHHHHHHHHHHHHh-CCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHhhh
Q psy12581         74 ACDMWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKM  151 (153)
Q Consensus        74 ~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~~~  151 (153)
                      ++|+||+|+++||+++ |..||........... ...+..++.|...+..+.+++.+||+.+|++||++.+|.+.|+++
T Consensus       178 ~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~-i~~~~~~~~~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~~l~~~  255 (257)
T cd05116         178 KSDVWSFGVLMWEAFSYGQKPYKGMKGNEVTQM-IESGERMECPQRCPPEMYDLMKLCWTYGVDERPGFAVVELRLRNY  255 (257)
T ss_pred             hhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH-HHCCCCCCCCCCCCHHHHHHHHHHhccCchhCcCHHHHHHHHhcc
Confidence            8999999999999998 9999987665544433 334445566777899999999999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=99.95  E-value=6.5e-27  Score=159.26  Aligned_cols=141  Identities=26%  Similarity=0.430  Sum_probs=113.2

Q ss_pred             hhHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccccC------CcccCCcccCccccccCCCCCCcchhhHHH
Q psy12581          6 IVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQR------GRCYYPAWMSPEALQKKPGDRNLEACDMWS   79 (153)
Q Consensus         6 ~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~------~~~~~~~~~~pe~~~~~~~~~~~~~~dv~s   79 (153)
                      .-++.|||++++.|+||.+.||+++.++.+|+.  |||++....      ....+..|++||.+...   .++.++|+||
T Consensus       129 ~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl~--dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~DvwS  203 (297)
T cd05089         129 ATGMQYLSEKQFIHRDLAARNVLVGENLASKIA--DFGLSRGEEVYVKKTMGRLPVRWMAIESLNYS---VYTTKSDVWS  203 (297)
T ss_pred             HHHHHHHHHCCcccCcCCcceEEECCCCeEEEC--CcCCCccccceeccCCCCcCccccCchhhccC---CCCchhhHHH
Confidence            346799999999999999999999999988888  999874321      11224569999988653   3457899999


Q ss_pred             HHHHHHHHHh-CCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHhhhh
Q psy12581         80 FAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKMK  152 (153)
Q Consensus        80 ~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~~~~  152 (153)
                      +|++++++++ |..||............. .+.....+..++..+.+++.+||..+|.+||+++++++.|+.+.
T Consensus       204 lG~il~el~t~g~~pf~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~  276 (297)
T cd05089         204 FGVLLWEIVSLGGTPYCGMTCAELYEKLP-QGYRMEKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQLSRML  276 (297)
T ss_pred             HHHHHHHHHcCCCCCCCCCCHHHHHHHHh-cCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence            9999999997 999998766555444332 34445556678899999999999999999999999999988764

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=99.94  E-value=4.9e-27  Score=161.12  Aligned_cols=143  Identities=20%  Similarity=0.339  Sum_probs=115.2

Q ss_pred             chhhHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccccC---------CcccCCcccCccccccCCCCCCcch
Q psy12581          4 KKIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQR---------GRCYYPAWMSPEALQKKPGDRNLEA   74 (153)
Q Consensus         4 ~~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~---------~~~~~~~~~~pe~~~~~~~~~~~~~   74 (153)
                      +..-++.|||++++.|+||++.||+++.++.+|+.  |||++....         ....+..|++||.+.+.   .++.+
T Consensus       117 qi~~~L~~LH~~~iiH~dlkp~Nill~~~~~~kl~--DfG~a~~~~~~~~~~~~~~~~~~~~y~apE~~~~~---~~~~~  191 (316)
T cd05108         117 QIAKGMNYLEERRLVHRDLAARNVLVKTPQHVKIT--DFGLAKLLGADEKEYHAEGGKVPIKWMALESILHR---IYTHQ  191 (316)
T ss_pred             HHHHHHHHHHhcCeeccccchhheEecCCCcEEEc--cccccccccCCCcceeccCCccceeecChHHhccC---CCCch
Confidence            44557899999999999999999999999988888  999984321         12235579999998754   44588


Q ss_pred             hhHHHHHHHHHHHHh-CCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHhhhh
Q psy12581         75 CDMWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKMK  152 (153)
Q Consensus        75 ~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~~~~  152 (153)
                      +|+||||+++|++++ |..||.+...... ..+.......+.+...+..+.+++.+||..+|++||++.+++..|.++.
T Consensus       192 ~Di~slGv~l~el~t~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~  269 (316)
T cd05108         192 SDVWSYGVTVWELMTFGSKPYDGIPASEI-SSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMA  269 (316)
T ss_pred             hhhHHHHHHHHHHHcCCCCCCCCCCHHHH-HHHHhCCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence            999999999999987 9999977654443 3444455555666678889999999999999999999999999988764

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>KOG0593|consensus

Probab=99.94  E-value=1.8e-27  Score=156.42  Aligned_cols=135  Identities=18%  Similarity=0.255  Sum_probs=109.5

Q ss_pred             hHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccccC-------CcccCCcccCccccccCCCCCCcchhhHHH
Q psy12581          7 VYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQR-------GRCYYPAWMSPEALQKKPGDRNLEACDMWS   79 (153)
Q Consensus         7 ~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~-------~~~~~~~~~~pe~~~~~~~~~~~~~~dv~s   79 (153)
                      -+..|+|+++++|+||++.||+|+.+|.+|++  |||+|....       .-..|.+|.+||.+.+.  ..++...|+|+
T Consensus       112 ~ai~~cHk~n~IHRDIKPENILit~~gvvKLC--DFGFAR~L~~pgd~YTDYVATRWYRaPELLvGD--tqYG~pVDiWA  187 (396)
T KOG0593|consen  112 KAIHFCHKNNCIHRDIKPENILITQNGVVKLC--DFGFARTLSAPGDNYTDYVATRWYRAPELLVGD--TQYGKPVDIWA  187 (396)
T ss_pred             HHhhhhhhcCeecccCChhheEEecCCcEEec--cchhhHhhcCCcchhhhhhhhhhccChhhhccc--CcCCCcccchh
Confidence            46789999999999999999999999999999  999996553       22568899999999873  24558899999


Q ss_pred             HHHHHHHHHhCCCCCCCCCchhhhHHHHh-------------------hccccCCCC----------CCCHHHHHHHHHH
Q psy12581         80 FAVLLWELATREVPFADLTPMEVGMKVAL-------------------EGLRITIPP----------GISSHLSKLIRIC  130 (153)
Q Consensus        80 ~g~~~~~~~~g~~p~~~~~~~~~~~~~~~-------------------~~~~~~~~~----------~~~~~~~~l~~~c  130 (153)
                      +||++.|+++|.+-|.+.++.+++..+..                   .+...+.|.          ..+..+.+++++|
T Consensus       188 iGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~~F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~c  267 (396)
T KOG0593|consen  188 IGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNPFFHGVRLPEPEHPEPLERKYPKISNVLLDLLKKC  267 (396)
T ss_pred             hhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCCceeeeecCCCCCccchhhhcccchHHHHHHHHHH
Confidence            99999999999999999888777665432                   112222221          2356788999999


Q ss_pred             hcCCCCCCCCHHHHH
Q psy12581        131 MNEDPGKRPTFDMVL  145 (153)
Q Consensus       131 l~~~p~~Rps~~~~l  145 (153)
                      |..||++|++.++++
T Consensus       268 L~~dP~~R~sc~qll  282 (396)
T KOG0593|consen  268 LKMDPDDRLSCEQLL  282 (396)
T ss_pred             hcCCccccccHHHHh
Confidence            999999999999987

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=99.94  E-value=5.9e-28  Score=166.16  Aligned_cols=135  Identities=21%  Similarity=0.325  Sum_probs=111.1

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc-------CCcccCCcccCccccccCCCCCCcchhhH
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ-------RGRCYYPAWMSPEALQKKPGDRNLEACDM   77 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~-------~~~~~~~~~~~pe~~~~~~~~~~~~~~dv   77 (153)
                      ..-++.|||++++.|+||++.||+++.++.+|+.  |||++...       ...+|++.|++||.+.+.   .++.++|+
T Consensus       104 i~~~L~~lH~~~ivHrDlkp~NIll~~~~~~kl~--DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~Di  178 (323)
T cd05571         104 IVSALGYLHSCDVVYRDLKLENLMLDKDGHIKIT--DFGLCKEGISDGATMKTFCGTPEYLAPEVLEDN---DYGRAVDW  178 (323)
T ss_pred             HHHHHHHHHhCCeEeCCCCHHHEEECCCCCEEEe--eCCCCcccccCCCcccceecCccccChhhhcCC---CCCccccC
Confidence            3457899999999999999999999999998888  99987432       234689999999998764   34578999


Q ss_pred             HHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCC-----CHHHHHH
Q psy12581         78 WSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRP-----TFDMVLP  146 (153)
Q Consensus        78 ~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----s~~~~l~  146 (153)
                      ||+|+++|++++|..||.+.........+...  ....|...+..+.+++.+||+.||++||     ++.++++
T Consensus       179 wSlG~il~elltg~~Pf~~~~~~~~~~~~~~~--~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~  250 (323)
T cd05571         179 WGLGVVMYEMMCGRLPFYNQDHEKLFELILME--EIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIME  250 (323)
T ss_pred             cccchhhhhhhcCCCCCCCCCHHHHHHHHHcC--CCCCCCCCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHc
Confidence            99999999999999999876655554444333  3455777899999999999999999999     7888764

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=99.94  E-value=1.4e-26  Score=154.85  Aligned_cols=143  Identities=28%  Similarity=0.477  Sum_probs=111.6

Q ss_pred             chhhHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccccC-----------CcccCCcccCccccccCCCCCCc
Q psy12581          4 KKIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQR-----------GRCYYPAWMSPEALQKKPGDRNL   72 (153)
Q Consensus         4 ~~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~-----------~~~~~~~~~~pe~~~~~~~~~~~   72 (153)
                      ..+-+..|||++++.|+||.+.||+++.++.+|+.  |||++....           ...++..|++||...+.   .++
T Consensus       106 ~i~~~l~~lH~~~i~H~dlk~~nili~~~~~~kl~--dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~  180 (262)
T cd05058         106 QVAKGMEYLASKKFVHRDLAARNCMLDESFTVKVA--DFGLARDIYDKEYYSVHNHTGAKLPVKWMALESLQTQ---KFT  180 (262)
T ss_pred             HHHHHHHHHHhCCccccccCcceEEEcCCCcEEEC--CccccccccCCcceeecccccCcCCccccChhHhccC---ccc
Confidence            34556799999999999999999999999988888  999874321           12345679999988753   355


Q ss_pred             chhhHHHHHHHHHHHHh-CCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHhhh
Q psy12581         73 EACDMWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKM  151 (153)
Q Consensus        73 ~~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~~~  151 (153)
                      .++|+||+|++++++++ |.+||........... ...+..+..+...+..+.+++.+||..+|++||++.++++.|+++
T Consensus       181 ~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~l~~~  259 (262)
T cd05058         181 TKSDVWSFGVLLWELMTRGAPPYPDVDSFDITVY-LLQGRRLLQPEYCPDPLYEVMLSCWHPKPEMRPTFSELVSRIEQI  259 (262)
T ss_pred             hHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH-HhcCCCCCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHH
Confidence            89999999999999999 5666665544443333 333334445566788999999999999999999999999999887


Q ss_pred             h
Q psy12581        152 K  152 (153)
Q Consensus       152 ~  152 (153)
                      .
T Consensus       260 ~  260 (262)
T cd05058         260 F  260 (262)
T ss_pred             h
Confidence            4

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>KOG4278|consensus

Probab=99.94  E-value=4.8e-27  Score=167.48  Aligned_cols=140  Identities=26%  Similarity=0.467  Sum_probs=122.2

Q ss_pred             hHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccccCCccc--------CCcccCccccccCCCCCCcchhhHH
Q psy12581          7 VYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQRGRCY--------YPAWMSPEALQKKPGDRNLEACDMW   78 (153)
Q Consensus         7 ~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~~~~~--------~~~~~~pe~~~~~~~~~~~~~~dv~   78 (153)
                      -+.+||..++++|+|+..+||++.++..+||.  |||++..++.-..        ...|++||-+..   ..++.++|||
T Consensus       376 SaMeYLEkknFIHRDLAARNCLVgEnhiVKvA--DFGLsRlMtgDTYTAHAGAKFPIKWTAPEsLAy---NtFSiKSDVW  450 (1157)
T KOG4278|consen  376 SAMEYLEKKNFIHRDLAARNCLVGENHIVKVA--DFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY---NTFSIKSDVW  450 (1157)
T ss_pred             HHHHHHHHhhhhhhhhhhhhccccccceEEee--ccchhhhhcCCceecccCccCcccccCcccccc---cccccchhhH
Confidence            35688999999999999999999999999999  9999966544322        357999998874   4677999999


Q ss_pred             HHHHHHHHHHh-CCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHhhhh
Q psy12581         79 SFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKMK  152 (153)
Q Consensus        79 s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~~~~  152 (153)
                      +||+++||+.| |..||.+.+... .+..+.+++++..|+.+++.+.++|+.||+.+|++||++.++.+.|+.|.
T Consensus       451 AFGVLLWEIATYGMsPYPGidlSq-VY~LLEkgyRM~~PeGCPpkVYeLMraCW~WsPsDRPsFaeiHqafEtmf  524 (1157)
T KOG4278|consen  451 AFGVLLWEIATYGMSPYPGIDLSQ-VYGLLEKGYRMDGPEGCPPKVYELMRACWNWSPSDRPSFAEIHQAFETMF  524 (1157)
T ss_pred             HHHHHHHHHHhcCCCCCCCccHHH-HHHHHhccccccCCCCCCHHHHHHHHHHhcCCcccCccHHHHHHHHHHHh
Confidence            99999999988 889998877554 45678899999999999999999999999999999999999999999874

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=99.94  E-value=4.6e-27  Score=169.51  Aligned_cols=137  Identities=26%  Similarity=0.360  Sum_probs=112.7

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc---------CCcccCCcccCccccccCCCCCCcchh
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ---------RGRCYYPAWMSPEALQKKPGDRNLEAC   75 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~---------~~~~~~~~~~~pe~~~~~~~~~~~~~~   75 (153)
                      ..-++.|||++++.|+||+++||+++.++.+||.  |||++...         ...+|++.|++||.+.+.   .++.++
T Consensus       152 ll~aL~~lH~~~IiHrDLKP~NILl~~~~~vkL~--DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~---~~s~k~  226 (496)
T PTZ00283        152 VLLAVHHVHSKHMIHRDIKSANILLCSNGLVKLG--DFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRK---PYSKKA  226 (496)
T ss_pred             HHHHHHHHHhCCEecCCCCHHHEEEeCCCCEEEE--ecccCeeccccccccccccccCCcceeCHHHhCCC---CCCcHH
Confidence            3456789999999999999999999999998888  99987322         234688999999998764   355899


Q ss_pred             hHHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHH
Q psy12581         76 DMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPI  147 (153)
Q Consensus        76 dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~  147 (153)
                      |+||+|+++|++++|+.||.+............ +...+.+...++.+.+++.+||+.+|++||++.++++.
T Consensus       227 DVwSlGvilyeLltG~~Pf~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~  297 (496)
T PTZ00283        227 DMFSLGVLLYELLTLKRPFDGENMEEVMHKTLA-GRYDPLPPSISPEMQEIVTALLSSDPKRRPSSSKLLNM  297 (496)
T ss_pred             HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhc-CCCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHhC
Confidence            999999999999999999987765555444432 33345677789999999999999999999999998753

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=99.94  E-value=1.4e-26  Score=156.32  Aligned_cols=143  Identities=20%  Similarity=0.329  Sum_probs=114.0

Q ss_pred             chhhHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccccC---------CcccCCcccCccccccCCCCCCcch
Q psy12581          4 KKIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQR---------GRCYYPAWMSPEALQKKPGDRNLEA   74 (153)
Q Consensus         4 ~~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~---------~~~~~~~~~~pe~~~~~~~~~~~~~   74 (153)
                      ...-++.|||++++.|+||.+.||+++.++.+|+.  |||++....         ...++..|++||.+.+.   .++.+
T Consensus       117 qi~~~L~~lH~~~iiH~dlkp~Nil~~~~~~~kL~--dfG~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~---~~~~~  191 (279)
T cd05109         117 QIAKGMSYLEEVRLVHRDLAARNVLVKSPNHVKIT--DFGLARLLDIDETEYHADGGKVPIKWMALESILHR---RFTHQ  191 (279)
T ss_pred             HHHHHHHHHHHCCeeccccccceEEEcCCCcEEEC--CCCceeecccccceeecCCCccchhhCCHHHhccC---CCCch
Confidence            44567899999999999999999999999888887  999874321         12235679999998653   35578


Q ss_pred             hhHHHHHHHHHHHHh-CCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHhhhh
Q psy12581         75 CDMWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKMK  152 (153)
Q Consensus        75 ~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~~~~  152 (153)
                      +|+||+|+++||+++ |..||......... .....+...+.+...+..+.+++.+||..||++||++.++++.|.++.
T Consensus       192 ~Di~slG~~l~el~t~g~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~  269 (279)
T cd05109         192 SDVWSYGVTVWELMTFGAKPYDGIPAREIP-DLLEKGERLPQPPICTIDVYMIMVKCWMIDSECRPRFRELVDEFSRMA  269 (279)
T ss_pred             hHHHHHHHHHHHHHcCCCCCCCCCCHHHHH-HHHHCCCcCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhh
Confidence            999999999999988 89998766544433 333344445556678899999999999999999999999999998775

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=99.94  E-value=1e-26  Score=157.17  Aligned_cols=140  Identities=21%  Similarity=0.326  Sum_probs=112.6

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc---------CCcccCCcccCccccccCCCCCCcchh
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ---------RGRCYYPAWMSPEALQKKPGDRNLEAC   75 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~---------~~~~~~~~~~~pe~~~~~~~~~~~~~~   75 (153)
                      ..-++.|||++++.|+||++.||+++.++.+|+.  |||++...         ....+++.|++||.+.+.   ..+.++
T Consensus       133 l~~aL~~lH~~gi~H~dlkp~Nil~~~~~~~kl~--Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~  207 (283)
T cd05091         133 IAAGMEFLSSHHVVHKDLATRNVLVFDKLNVKIS--DLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYG---KFSIDS  207 (283)
T ss_pred             HHHHHHHHHHcCccccccchhheEecCCCceEec--ccccccccccchheeeccCccCCccccCHHHHhcC---CCCcch
Confidence            4457899999999999999999999999888888  99986432         122345689999998653   345789


Q ss_pred             hHHHHHHHHHHHHh-CCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHhh
Q psy12581         76 DMWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDK  150 (153)
Q Consensus        76 dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~~  150 (153)
                      |+||+|++++++++ |..||.+.........+. .....+.+...+..+.+++.+||+.+|+.||++.+++..|..
T Consensus       208 Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~i~-~~~~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~~  282 (283)
T cd05091         208 DIWSYGVVLWEVFSYGLQPYCGYSNQDVIEMIR-NRQVLPCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLRT  282 (283)
T ss_pred             hHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHH-cCCcCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence            99999999999998 888987766555444433 333445567789999999999999999999999999998864

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=99.94  E-value=1.6e-26  Score=156.04  Aligned_cols=142  Identities=22%  Similarity=0.327  Sum_probs=113.8

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc---------CCcccCCcccCccccccCCCCCCcchh
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ---------RGRCYYPAWMSPEALQKKPGDRNLEAC   75 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~---------~~~~~~~~~~~pe~~~~~~~~~~~~~~   75 (153)
                      ..-++.|||++++.|+||.+.||+++.++.+|+.  |||.+...         ....++..|++||.+.+.   .++.++
T Consensus       118 i~~~l~~lH~~~iiH~dlkp~nili~~~~~~kl~--Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~---~~~~~~  192 (279)
T cd05111         118 IAKGMYYLEEHRMVHRNLAARNILLKSDSIVQIA--DFGVADLLYPDDKKYFYSEHKTPIKWMALESILFG---RYTHQS  192 (279)
T ss_pred             HHHHHHHHHHCCEeccccCcceEEEcCCCcEEEc--CCccceeccCCCcccccCCCCCcccccCHHHhccC---CcCchh
Confidence            3456799999999999999999999999988888  99988432         112345689999998753   355889


Q ss_pred             hHHHHHHHHHHHHh-CCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHhhhh
Q psy12581         76 DMWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKMK  152 (153)
Q Consensus        76 dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~~~~  152 (153)
                      |+||||+++||+++ |..||.+...... ......+.....+...+..+.+++.+||..+|++|||+.++++.|..+.
T Consensus       193 Dv~slG~il~el~t~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rps~~el~~~l~~~~  269 (279)
T cd05111         193 DVWSYGVTVWEMMSYGAEPYAGMRPHEV-PDLLEKGERLAQPQICTIDVYMVMVKCWMIDENVRPTFKELANEFTRMA  269 (279)
T ss_pred             hHHHHHHHHHHHHcCCCCCCCCCCHHHH-HHHHHCCCcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHH
Confidence            99999999999998 9999977654443 3334444455555667788999999999999999999999999998764

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>KOG0194|consensus

Probab=99.94  E-value=5.8e-28  Score=169.66  Aligned_cols=146  Identities=26%  Similarity=0.431  Sum_probs=128.6

Q ss_pred             ccchhhHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccccC-------CcccCCcccCccccccCCCCCCcch
Q psy12581          2 KKKKIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQR-------GRCYYPAWMSPEALQKKPGDRNLEA   74 (153)
Q Consensus         2 ~~~~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~-------~~~~~~~~~~pe~~~~~~~~~~~~~   74 (153)
                      |++++-.++|||+++++|+||..+||+++.++.+|++  |||++....       ....+..|+|||.+...   .++.+
T Consensus       268 ~~~AA~Gl~YLh~k~~IHRDIAARNcL~~~~~~vKIS--DFGLs~~~~~~~~~~~~~klPirWLAPEtl~~~---~~s~k  342 (474)
T KOG0194|consen  268 CYDAARGLEYLHSKNCIHRDIAARNCLYSKKGVVKIS--DFGLSRAGSQYVMKKFLKKLPIRWLAPETLNTG---IFSFK  342 (474)
T ss_pred             HHHHHhHHHHHHHCCCcchhHhHHHheecCCCeEEeC--ccccccCCcceeeccccccCcceecChhhhccC---ccccc
Confidence            5667788999999999999999999999999998999  999985442       11245689999999864   56689


Q ss_pred             hhHHHHHHHHHHHHh-CCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHhhhh
Q psy12581         75 CDMWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKMK  152 (153)
Q Consensus        75 ~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~~~~  152 (153)
                      +|||+||+++||+++ |..||.+........++...+++.+.|...+..+..++.+||..+|++||++.++.+.|+.+.
T Consensus       343 TDV~sfGV~~~Eif~~g~~Py~g~~~~~v~~kI~~~~~r~~~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~~  421 (474)
T KOG0194|consen  343 TDVWSFGVLLWEIFENGAEPYPGMKNYEVKAKIVKNGYRMPIPSKTPKELAKVMKQCWKKDPEDRPTMSTIKKKLEALE  421 (474)
T ss_pred             cchhheeeeEEeeeccCCCCCCCCCHHHHHHHHHhcCccCCCCCCCHHHHHHHHHHhccCChhhccCHHHHHHHHHHHH
Confidence            999999999999988 889999999888888887888889889999999999999999999999999999999998764

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=99.94  E-value=1.9e-26  Score=154.93  Aligned_cols=140  Identities=25%  Similarity=0.400  Sum_probs=112.3

Q ss_pred             hhHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccccC---------CcccCCcccCccccccCCCCCCcchhh
Q psy12581          6 IVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQR---------GRCYYPAWMSPEALQKKPGDRNLEACD   76 (153)
Q Consensus         6 ~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~---------~~~~~~~~~~pe~~~~~~~~~~~~~~d   76 (153)
                      .-++.|||++++.|+||++.||+++.++.+++.  |||++....         ...+++.|++||...+.   ..+.++|
T Consensus       122 ~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~--Dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~---~~~~~~D  196 (272)
T cd05075         122 ASGMEYLSSKSFIHRDLAARNCMLNENMNVCVA--DFGLSKKIYNGDYYRQGRIAKMPVKWIAIESLADR---VYTTKSD  196 (272)
T ss_pred             HHHHHHHHHCCeeccccchhheEEcCCCCEEEC--CCCcccccCcccceecCCcccCCcccCCHHHccCC---CcChHHH
Confidence            346799999999999999999999999988888  999974321         12345679999988753   3558899


Q ss_pred             HHHHHHHHHHHHh-CCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHhhh
Q psy12581         77 MWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKM  151 (153)
Q Consensus        77 v~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~~~  151 (153)
                      +||+|+++|++++ |+.||.+.........+ ..+.....+...+..+.+++.+||+.+|++|||+.++++.|+++
T Consensus       197 i~slG~il~el~~~g~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~  271 (272)
T cd05075         197 VWSFGVTMWEIATRGQTPYPGVENSEIYDYL-RQGNRLKQPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCELEKA  271 (272)
T ss_pred             HHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH-HcCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence            9999999999998 88999776554443333 33334445667888999999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=99.94  E-value=1.4e-26  Score=154.58  Aligned_cols=142  Identities=21%  Similarity=0.331  Sum_probs=113.8

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccccC----------CcccCCcccCccccccCCCCCCcch
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQR----------GRCYYPAWMSPEALQKKPGDRNLEA   74 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~----------~~~~~~~~~~pe~~~~~~~~~~~~~   74 (153)
                      ..-++.|||.+++.|+||.+.||+++.++.+++.  |||.+....          ...++..|++||.+.+.   ..+.+
T Consensus       104 i~~~l~~lh~~~i~H~di~p~nili~~~~~~kl~--df~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~  178 (257)
T cd05060         104 VAMGMAYLESKHFVHRDLAARNVLLVNRHQAKIS--DFGMSRALGAGSDYYRATTAGRWPLKWYAPECINYG---KFSSK  178 (257)
T ss_pred             HHHHHHHHhhcCeeccCcccceEEEcCCCcEEec--cccccceeecCCcccccccCccccccccCHHHhcCC---CCCcc
Confidence            4556789999999999999999999999988888  999874321          11223579999988754   34578


Q ss_pred             hhHHHHHHHHHHHHh-CCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHhhhh
Q psy12581         75 CDMWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKMK  152 (153)
Q Consensus        75 ~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~~~~  152 (153)
                      +|+||+|++++++++ |..||...........+ ......+.+...+..+.+++.+||..+|++||++.++++.|+++.
T Consensus       179 ~Di~slG~~l~~~~~~g~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~~  256 (257)
T cd05060         179 SDVWSYGVTLWEAFSYGAKPYGEMKGAEVIAML-ESGERLPRPEECPQEIYSIMLSCWKYRPEDRPTFSELESTFRRDP  256 (257)
T ss_pred             chHHHHHHHHHHHHcCCCCCcccCCHHHHHHHH-HcCCcCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhcc
Confidence            999999999999998 99999776655443333 333345566778899999999999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>KOG0696|consensus

Probab=99.94  E-value=5.5e-27  Score=160.29  Aligned_cols=131  Identities=22%  Similarity=0.367  Sum_probs=117.3

Q ss_pred             cchhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccc-------ccCCcccCCcccCccccccCCCCCCcchh
Q psy12581          3 KKKIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSF-------QQRGRCYYPAWMSPEALQKKPGDRNLEAC   75 (153)
Q Consensus         3 ~~~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~-------~~~~~~~~~~~~~pe~~~~~~~~~~~~~~   75 (153)
                      ...+|.+.|||++||+-++++++|+++|.+|++|+.  |||++.       .+.+.||||.|+|||++..++++   ...
T Consensus       457 aEiaigLFFLh~kgIiYRDLKLDNvmLd~eGHiKi~--DFGmcKEni~~~~TTkTFCGTPdYiAPEIi~YqPYg---ksv  531 (683)
T KOG0696|consen  457 AEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIA--DFGMCKENIFDGVTTKTFCGTPDYIAPEIIAYQPYG---KSV  531 (683)
T ss_pred             HHHHHHhhhhhcCCeeeeeccccceEeccCCceEee--ecccccccccCCcceeeecCCCcccccceEEecccc---cch
Confidence            456889999999999999999999999999999999  999983       23567999999999999987655   889


Q ss_pred             hHHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCC
Q psy12581         76 DMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPT  140 (153)
Q Consensus        76 dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps  140 (153)
                      |.|++|+++||++.|++||.+.+..+..+.+....  ..+|...+.++.++.+..+...|.+|..
T Consensus       532 DWWa~GVLLyEmlaGQpPFdGeDE~elF~aI~ehn--vsyPKslSkEAv~ickg~ltK~P~kRLG  594 (683)
T KOG0696|consen  532 DWWAFGVLLYEMLAGQPPFDGEDEDELFQAIMEHN--VSYPKSLSKEAVAICKGLLTKHPGKRLG  594 (683)
T ss_pred             hHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHcc--CcCcccccHHHHHHHHHHhhcCCccccC
Confidence            99999999999999999999999999888887664  4568899999999999999999999964

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=99.94  E-value=1.4e-26  Score=154.40  Aligned_cols=141  Identities=26%  Similarity=0.383  Sum_probs=114.1

Q ss_pred             chhhHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccccCC----------cccCCcccCccccccCCCCCCcc
Q psy12581          4 KKIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQRG----------RCYYPAWMSPEALQKKPGDRNLE   73 (153)
Q Consensus         4 ~~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~~----------~~~~~~~~~pe~~~~~~~~~~~~   73 (153)
                      ..+-++.|||.+++.|+||.+.||+++.++.+|+.  |||++.....          ..++..|++||.+.+.   ..+.
T Consensus       105 qi~~~L~~lH~~~i~H~di~p~nil~~~~~~~kl~--dfg~~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~---~~~~  179 (257)
T cd05040         105 QIANGMRYLESKRFIHRDLAARNILLASDDKVKIG--DFGLMRALPQNEDHYVMEEHLKVPFAWCAPESLRTR---TFSH  179 (257)
T ss_pred             HHHHHHHHHHhCCccccccCcccEEEecCCEEEec--cccccccccccccceecccCCCCCceecCHHHhccc---CcCc
Confidence            34567899999999999999999999999988888  9998743321          2456689999988754   3457


Q ss_pred             hhhHHHHHHHHHHHHh-CCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHh
Q psy12581         74 ACDMWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILD  149 (153)
Q Consensus        74 ~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~  149 (153)
                      ++|+||+|++++++++ |..||......+....+.........+...+..+.+++.+||..+|++||++.++++.|.
T Consensus       180 ~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~  256 (257)
T cd05040         180 ASDVWMFGVTLWEMFTYGEEPWAGLSGSQILKKIDKEGERLERPEACPQDIYNVMLQCWAHNPADRPTFAALREFLP  256 (257)
T ss_pred             hhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCcCCCCccCCHHHHHHHHHHCCCCcccCCCHHHHHHHhc
Confidence            8999999999999998 999998776665554444333444456667899999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=99.94  E-value=1.6e-26  Score=157.75  Aligned_cols=143  Identities=22%  Similarity=0.381  Sum_probs=114.7

Q ss_pred             chhhHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccccC---------CcccCCcccCccccccCCCCCCcch
Q psy12581          4 KKIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQR---------GRCYYPAWMSPEALQKKPGDRNLEA   74 (153)
Q Consensus         4 ~~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~---------~~~~~~~~~~pe~~~~~~~~~~~~~   74 (153)
                      ...-+..|||++++.|+||.+.||+++.++.+++.  |||++....         ...++..|++||.+...   ..+.+
T Consensus       149 ~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~--dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~  223 (302)
T cd05055         149 QVAKGMAFLASKNCIHRDLAARNVLLTHGKIVKIC--DFGLARDIMNDSNYVVKGNARLPVKWMAPESIFNC---VYTFE  223 (302)
T ss_pred             HHHHHHHHHHHCCeehhhhccceEEEcCCCeEEEC--CCcccccccCCCceeecCCCCcccccCCHhhhccC---CCCcH
Confidence            34556789999999999999999999999888888  999874321         12345679999988754   34578


Q ss_pred             hhHHHHHHHHHHHHh-CCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHhhh
Q psy12581         75 CDMWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKM  151 (153)
Q Consensus        75 ~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~~~  151 (153)
                      +|+||+|++++++++ |..||...............+.....+...+..+.+++.+||..+|++||++.++++.|+++
T Consensus       224 ~DiwslGvil~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~~  301 (302)
T cd05055         224 SDVWSYGILLWEIFSLGSNPYPGMPVDSKFYKLIKEGYRMAQPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGKQ  301 (302)
T ss_pred             hHHHHHHHHHHHHHhCCCCCcCCCCchHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHhh
Confidence            999999999999998 99999776655544444444444445566788999999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=99.94  E-value=1.3e-26  Score=157.17  Aligned_cols=143  Identities=27%  Similarity=0.390  Sum_probs=115.9

Q ss_pred             chhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc---------CCcccCCcccCccccccCCCCCCcch
Q psy12581          4 KKIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ---------RGRCYYPAWMSPEALQKKPGDRNLEA   74 (153)
Q Consensus         4 ~~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~---------~~~~~~~~~~~pe~~~~~~~~~~~~~   74 (153)
                      ...-+..|||++++.|+||.+.||+++.++.+++.  |||++...         ....++..|++||.+.+.   ..+.+
T Consensus       135 ~i~~~l~~LH~~~ivH~dikp~nill~~~~~~kl~--dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~---~~~~~  209 (290)
T cd05045         135 QISRGMQYLAEMKLVHRDLAARNVLVAEGRKMKIS--DFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDH---IYTTQ  209 (290)
T ss_pred             HHHHHHHHHHHCCeehhhhhhheEEEcCCCcEEec--cccccccccCccchhcccCCCCCccccCHHHHccC---CcchH
Confidence            34567899999999999999999999999988888  99987432         112345689999987653   35588


Q ss_pred             hhHHHHHHHHHHHHh-CCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHhhhh
Q psy12581         75 CDMWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKMK  152 (153)
Q Consensus        75 ~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~~~~  152 (153)
                      +|+||+|++++++++ |..||.+........ ........+.+...+..+.+++.+||+.+|++||++.++++.|+++.
T Consensus       210 ~Di~slG~~l~el~t~g~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~~  287 (290)
T cd05045         210 SDVWSFGVLLWEIVTLGGNPYPGIAPERLFN-LLKTGYRMERPENCSEEMYNLMLTCWKQEPDKRPTFADISKELEKMM  287 (290)
T ss_pred             hHHHHHHHHHHHHHhcCCCCCCCCCHHHHHH-HHhCCCCCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHHHH
Confidence            999999999999998 999997766555433 33444455567778899999999999999999999999999999873

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=99.94  E-value=3.7e-27  Score=160.09  Aligned_cols=135  Identities=23%  Similarity=0.335  Sum_probs=111.0

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccccC----CcccCCcccCccccccCCCCCCcchhhHHHH
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQR----GRCYYPAWMSPEALQKKPGDRNLEACDMWSF   80 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~----~~~~~~~~~~pe~~~~~~~~~~~~~~dv~s~   80 (153)
                      ..-++.|||++++.|+||.+.||+++.++.+|+.  |||++....    ...|++.|++||.+.+.   ..+.++|+||+
T Consensus       110 i~~~l~~lH~~~i~H~dlkp~NIli~~~~~~kl~--Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwSl  184 (291)
T cd05612         110 IVCALEYLHSKEIVYRDLKPENILLDKEGHIKLT--DFGFAKKLRDRTWTLCGTPEYLAPEVIQSK---GHNKAVDWWAL  184 (291)
T ss_pred             HHHHHHHHHHCCeeecCCCHHHeEECCCCCEEEE--ecCcchhccCCcccccCChhhcCHHHHcCC---CCCchhhHHHH
Confidence            3456799999999999999999999999988888  999884332    34688999999998764   34578999999


Q ss_pred             HHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCC-----HHHHHH
Q psy12581         81 AVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPT-----FDMVLP  146 (153)
Q Consensus        81 g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps-----~~~~l~  146 (153)
                      |+++|++++|..||.+.........+...  ....|...+..+.+++++||+.||.+|++     ++++++
T Consensus       185 G~il~~l~~g~~pf~~~~~~~~~~~i~~~--~~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~  253 (291)
T cd05612         185 GILIYEMLVGYPPFFDDNPFGIYEKILAG--KLEFPRHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKN  253 (291)
T ss_pred             HHHHHHHHhCCCCCCCCCHHHHHHHHHhC--CcCCCccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhc
Confidence            99999999999999887766555554433  34456677899999999999999999995     887764

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=99.94  E-value=2.5e-26  Score=153.82  Aligned_cols=140  Identities=26%  Similarity=0.456  Sum_probs=113.0

Q ss_pred             hhHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccccCC--------cccCCcccCccccccCCCCCCcchhhH
Q psy12581          6 IVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQRG--------RCYYPAWMSPEALQKKPGDRNLEACDM   77 (153)
Q Consensus         6 ~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~~--------~~~~~~~~~pe~~~~~~~~~~~~~~dv   77 (153)
                      .-++.|||.+++.|+||.+.||+++.++.+|+.  |||.+.....        ...+..|++||.+.+.   ..+.++|+
T Consensus       114 ~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~--df~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Dv  188 (263)
T cd05052         114 SSAMEYLEKKNFIHRDLAARNCLVGENHLVKVA--DFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYN---KFSIKSDV  188 (263)
T ss_pred             HHHHHHHHhCCEeecccCcceEEEcCCCcEEeC--CCccccccccceeeccCCCCCccccCCHHHhccC---CCCchhHH
Confidence            345789999999999999999999999988888  9998744322        1234579999988754   34578999


Q ss_pred             HHHHHHHHHHHh-CCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHhhh
Q psy12581         78 WSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKM  151 (153)
Q Consensus        78 ~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~~~  151 (153)
                      ||+|+++|++++ |..||.+......... .........+...+..+.+++.+||..+|++||++.++++.|+.+
T Consensus       189 ~slG~il~el~t~g~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~~  262 (263)
T cd05052         189 WAFGVLLWEIATYGMSPYPGIDLSQVYEL-LEKGYRMERPEGCPPKVYELMRACWQWNPSDRPSFAEIHQAFETM  262 (263)
T ss_pred             HHHHHHHHHHHcCCCCCCCCCCHHHHHHH-HHCCCCCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHhh
Confidence            999999999998 8999877655444333 334445566777889999999999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=99.94  E-value=2.4e-26  Score=155.08  Aligned_cols=139  Identities=25%  Similarity=0.387  Sum_probs=111.9

Q ss_pred             hhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc---------CCcccCCcccCccccccCCCCCCcchhh
Q psy12581          6 IVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ---------RGRCYYPAWMSPEALQKKPGDRNLEACD   76 (153)
Q Consensus         6 ~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~---------~~~~~~~~~~~pe~~~~~~~~~~~~~~d   76 (153)
                      .-++.|||.+++.|+||.+.||+++.++.+++.  |||.+...         ....++..|++||.+.+.   .++.++|
T Consensus       132 ~~~l~~lH~~~i~h~dlkp~nili~~~~~~kl~--d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~D  206 (280)
T cd05049         132 ASGMVYLASQHFVHRDLATRNCLVGYDLVVKIG--DFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYR---KFTTESD  206 (280)
T ss_pred             HHHHHHHhhCCeeccccccceEEEcCCCeEEEC--CcccceecccCcceecCCCCcccceecChhhhccC---Ccchhhh
Confidence            456789999999999999999999999988888  99987432         122345679999998764   3557899


Q ss_pred             HHHHHHHHHHHHh-CCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHhh
Q psy12581         77 MWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDK  150 (153)
Q Consensus        77 v~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~~  150 (153)
                      +||+|++++++++ |..||.+.........+. .+.....+...+..+.+++.+||+.+|++||++.++++.|++
T Consensus       207 i~slG~il~e~~~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~~  280 (280)
T cd05049         207 VWSFGVVLWEIFTYGKQPWYGLSNEEVIECIT-QGRLLQRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQK  280 (280)
T ss_pred             HHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHH-cCCcCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhhC
Confidence            9999999999998 999997766555444333 333444556788999999999999999999999999998863

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=99.94  E-value=1.4e-26  Score=154.48  Aligned_cols=141  Identities=23%  Similarity=0.421  Sum_probs=112.8

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccccC----CcccCCcccCccccccCCCCCCcchhhHHHH
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQR----GRCYYPAWMSPEALQKKPGDRNLEACDMWSF   80 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~----~~~~~~~~~~pe~~~~~~~~~~~~~~dv~s~   80 (153)
                      ..-++.|||++++.|+||.+.||+++.++.+|+.  |||++....    ....+..|++||.+...   ..+.++|+||+
T Consensus       111 i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~--dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Dv~sl  185 (256)
T cd05082         111 VCEAMEYLEANNFVHRDLAARNVLVSEDNVAKVS--DFGLTKEASSTQDTGKLPVKWTAPEALREK---KFSTKSDVWSF  185 (256)
T ss_pred             HHHHHHHHHhCCEeccccchheEEEcCCCcEEec--CCccceeccccCCCCccceeecCHHHHccC---CCCchhhhHHH
Confidence            4456789999999999999999999999988888  999875432    22345579999988653   34578999999


Q ss_pred             HHHHHHHHh-CCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHhhh
Q psy12581         81 AVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKM  151 (153)
Q Consensus        81 g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~~~  151 (153)
                      |+++|++++ |+.||........... .........+...++.+.+++.+||..+|++|||+.++++.|+.+
T Consensus       186 G~i~~~l~~~g~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~~  256 (256)
T cd05082         186 GILLWEIYSFGRVPYPRIPLKDVVPR-VEKGYKMDAPDGCPPVVYDVMKQCWHLDAATRPSFLQLREQLEHI  256 (256)
T ss_pred             HHHHHHHHhCCCCCCCCCCHHHHHHH-HhcCCCCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHhcC
Confidence            999999997 9999876554443332 333444555667889999999999999999999999999999764

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=99.94  E-value=4.3e-27  Score=159.52  Aligned_cols=138  Identities=14%  Similarity=0.102  Sum_probs=107.5

Q ss_pred             chhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc------CCcccCCcccCccccccCCCCCCcchhhH
Q psy12581          4 KKIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ------RGRCYYPAWMSPEALQKKPGDRNLEACDM   77 (153)
Q Consensus         4 ~~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~------~~~~~~~~~~~pe~~~~~~~~~~~~~~dv   77 (153)
                      ...-++.|||++++.|+||++.||+++.++.+|+.  |||.+...      ....+++.|++||.+.+.   .++.++|+
T Consensus       118 qi~~aL~~lH~~~iiH~dlkp~Nil~~~~~~~kl~--Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di  192 (290)
T cd07862         118 QLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLA--DFGLARIYSFQMALTSVVVTLWYRAPEVLLQS---SYATPVDL  192 (290)
T ss_pred             HHHHHHHHHHHCCeeeCCCCHHHEEEcCCCCEEEc--cccceEeccCCcccccccccccccChHHHhCC---CCCCccch
Confidence            34557899999999999999999999999988888  99987432      234678899999998754   34578999


Q ss_pred             HHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhcccc-------------------------CCCCCCCHHHHHHHHHHhc
Q psy12581         78 WSFAVLLWELATREVPFADLTPMEVGMKVALEGLRI-------------------------TIPPGISSHLSKLIRICMN  132 (153)
Q Consensus        78 ~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~~~l~~~cl~  132 (153)
                      ||+|+++|++++|..||.+.........+......+                         ......+..+.+++.+||+
T Consensus       193 wslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~  272 (290)
T cd07862         193 WSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLT  272 (290)
T ss_pred             HHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhchhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhc
Confidence            999999999999999998776555444433211000                         0012356788999999999


Q ss_pred             CCCCCCCCHHHHHH
Q psy12581        133 EDPGKRPTFDMVLP  146 (153)
Q Consensus       133 ~~p~~Rps~~~~l~  146 (153)
                      .||++|||+.++++
T Consensus       273 ~~P~~R~s~~~~l~  286 (290)
T cd07862         273 FNPAKRISAYSALS  286 (290)
T ss_pred             cCchhcCCHHHHhc
Confidence            99999999999875

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=99.94  E-value=1.8e-27  Score=163.00  Aligned_cols=133  Identities=21%  Similarity=0.243  Sum_probs=108.8

Q ss_pred             hhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc-------CCcccCCcccCccccccCCCCCCcchhhHH
Q psy12581          6 IVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ-------RGRCYYPAWMSPEALQKKPGDRNLEACDMW   78 (153)
Q Consensus         6 ~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~-------~~~~~~~~~~~pe~~~~~~~~~~~~~~dv~   78 (153)
                      .-++.|||++++.|+||++.||+++.++.+++.  |||++...       ....|++.|++||.+.+.   .++.++|+|
T Consensus       103 ~~~l~~lH~~~i~HrDlkp~Nili~~~~~~kl~--Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~Dvw  177 (312)
T cd05585         103 LCALENLHKFNVIYRDLKPENILLDYQGHIALC--DFGLCKLNMKDDDKTNTFCGTPEYLAPELLLGH---GYTKAVDWW  177 (312)
T ss_pred             HHHHHHHHhCCeEeCCCCHHHeEECCCCcEEEE--ECcccccCccCCCccccccCCcccCCHHHHcCC---CCCCcccee
Confidence            457899999999999999999999999998888  99987431       224688999999998764   345789999


Q ss_pred             HHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCC---HHHHH
Q psy12581         79 SFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPT---FDMVL  145 (153)
Q Consensus        79 s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps---~~~~l  145 (153)
                      |+|+++|++++|..||.+.........+...  ....+...+..+.+++.+||..||++||+   +.+++
T Consensus       178 slGvil~el~tg~~pf~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~L~~dp~~R~~~~~~~e~l  245 (312)
T cd05585         178 TLGVLLYEMLTGLPPFYDENVNEMYRKILQE--PLRFPDGFDRDAKDLLIGLLSRDPTRRLGYNGAQEIK  245 (312)
T ss_pred             chhHHHHHHHhCCCCcCCCCHHHHHHHHHcC--CCCCCCcCCHHHHHHHHHHcCCCHHHcCCCCCHHHHH
Confidence            9999999999999999877665555544433  34456778999999999999999999985   45554

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=99.94  E-value=1.1e-26  Score=167.22  Aligned_cols=135  Identities=25%  Similarity=0.331  Sum_probs=111.3

Q ss_pred             hhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc---------CCcccCCcccCccccccCCCCCCcchhh
Q psy12581          6 IVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ---------RGRCYYPAWMSPEALQKKPGDRNLEACD   76 (153)
Q Consensus         6 ~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~---------~~~~~~~~~~~pe~~~~~~~~~~~~~~d   76 (153)
                      .-++.|||+++|.|+||++.||+++.++.+|+.  |||++...         ...+||+.|++||.+.+.   .++.++|
T Consensus       179 ~~aL~~lH~~~ivHrDlkp~NIll~~~~~~kL~--DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~D  253 (478)
T PTZ00267        179 VLALDEVHSRKMMHRDLKSANIFLMPTGIIKLG--DFGFSKQYSDSVSLDVASSFCGTPYYLAPELWERK---RYSKKAD  253 (478)
T ss_pred             HHHHHHHHhCCEEECCcCHHhEEECCCCcEEEE--eCcCceecCCccccccccccCCCccccCHhHhCCC---CCCcHHh
Confidence            456789999999999999999999999998888  99998432         223589999999998764   4558899


Q ss_pred             HHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581         77 MWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus        77 v~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      +||+|++++++++|..||.+.........+... ...+.+...+..+.+++.+||..+|++||++++++.
T Consensus       254 v~slG~~l~el~tg~~Pf~~~~~~~~~~~~~~~-~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~  322 (478)
T PTZ00267        254 MWSLGVILYELLTLHRPFKGPSQREIMQQVLYG-KYDPFPCPVSSGMKALLDPLLSKNPALRPTTQQLLH  322 (478)
T ss_pred             HHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhC-CCCCCCccCCHHHHHHHHHHhccChhhCcCHHHHHh
Confidence            999999999999999999877665555544433 233456678899999999999999999999999864

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=99.94  E-value=2.7e-26  Score=153.36  Aligned_cols=140  Identities=24%  Similarity=0.426  Sum_probs=113.6

Q ss_pred             hhHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccccC-------CcccCCcccCccccccCCCCCCcchhhHH
Q psy12581          6 IVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQR-------GRCYYPAWMSPEALQKKPGDRNLEACDMW   78 (153)
Q Consensus         6 ~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~-------~~~~~~~~~~pe~~~~~~~~~~~~~~dv~   78 (153)
                      .-++.|||++++.|+||.+.||+++.++.+|+.  |||.+....       ...++..|++||.+...   .++.++|+|
T Consensus       114 ~~al~~lH~~~i~h~dl~~~nilv~~~~~~kl~--d~g~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~---~~~~~~Diw  188 (261)
T cd05148         114 AEGMAYLEEQNSIHRDLAARNILVGEDLVCKVA--DFGLARLIKEDVYLSSDKKIPYKWTAPEAASHG---TFSTKSDVW  188 (261)
T ss_pred             HHHHHHHHHCCeeccccCcceEEEcCCceEEEc--cccchhhcCCccccccCCCCceEecCHHHHccC---CCCchhhHH
Confidence            346789999999999999999999999998888  999874321       22345679999988653   345789999


Q ss_pred             HHHHHHHHHHh-CCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHhhh
Q psy12581         79 SFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKM  151 (153)
Q Consensus        79 s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~~~  151 (153)
                      ++|++++++++ |..||...........+. .....+.+...+..+.+++.+||..+|++|||+.++.+.|+.+
T Consensus       189 slG~~l~~l~~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~~  261 (261)
T cd05148         189 SFGILLYEMFTYGQVPYPGMNNHEVYDQIT-AGYRMPCPAKCPQEIYKIMLECWAAEPEDRPSFKALREELDNI  261 (261)
T ss_pred             HHHHHHHHHHcCCCCCCCcCCHHHHHHHHH-hCCcCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhcC
Confidence            99999999998 899997766555444433 4445556677889999999999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=99.94  E-value=1.6e-26  Score=156.13  Aligned_cols=140  Identities=21%  Similarity=0.358  Sum_probs=111.9

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccccC---------CcccCCcccCccccccCCCCCCcchh
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQR---------GRCYYPAWMSPEALQKKPGDRNLEAC   75 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~---------~~~~~~~~~~pe~~~~~~~~~~~~~~   75 (153)
                      ..-+..|||++++.|+||.+.||+++.++.+++.  |||++....         ...+++.|++||.+.+.   ..+.++
T Consensus       131 i~~al~~LH~~~i~H~dlkp~nil~~~~~~~kL~--dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~  205 (280)
T cd05092         131 IASGMVYLASLHFVHRDLATRNCLVGQGLVVKIG--DFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYR---KFTTES  205 (280)
T ss_pred             HHHHHHHHHHCCeecccccHhhEEEcCCCCEEEC--CCCceeEcCCCceeecCCCccccccccCHHHhccC---CcCchh
Confidence            3456789999999999999999999999988888  999874221         12235679999988754   345889


Q ss_pred             hHHHHHHHHHHHHh-CCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHhh
Q psy12581         76 DMWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDK  150 (153)
Q Consensus        76 dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~~  150 (153)
                      |+||+|+++|++++ |..||............ ..+.....+...++.+.+++.+||+.+|++||+++++.+.|++
T Consensus       206 Di~slG~il~el~~~g~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~~  280 (280)
T cd05092         206 DIWSFGVVLWEIFTYGKQPWYQLSNTEAIECI-TQGRELERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQA  280 (280)
T ss_pred             hHHHHHHHHHHHHcCCCCCCccCCHHHHHHHH-HcCccCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHhC
Confidence            99999999999998 89999776655544433 2333445566788999999999999999999999999998863

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=99.94  E-value=1.6e-26  Score=155.70  Aligned_cols=140  Identities=31%  Similarity=0.493  Sum_probs=113.6

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc---------CCcccCCcccCccccccCCCCCCcchh
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ---------RGRCYYPAWMSPEALQKKPGDRNLEAC   75 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~---------~~~~~~~~~~~pe~~~~~~~~~~~~~~   75 (153)
                      ..-++.|||++++.|+||.+.||+++.++.+++.  |||++...         ....++..|++||.+...   ..+.++
T Consensus       128 i~~~l~~lH~~~i~H~di~p~nill~~~~~~kl~--dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~  202 (277)
T cd05032         128 IADGMAYLAAKKFVHRDLAARNCMVAEDLTVKIG--DFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDG---VFTTKS  202 (277)
T ss_pred             HHHHHHHHHhCCccccccChheEEEcCCCCEEEC--CcccchhhccCcccccCCCCCccccccCHHHHhcC---CCCccc
Confidence            3456799999999999999999999999998888  99987321         122456789999988653   355789


Q ss_pred             hHHHHHHHHHHHHh-CCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHhh
Q psy12581         76 DMWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDK  150 (153)
Q Consensus        76 dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~~  150 (153)
                      |+|++|++++++++ |..||.+........... .+.....|...+..+.+++.+||+.+|++|||+.++++.|++
T Consensus       203 Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~  277 (277)
T cd05032         203 DVWSFGVVLWEMATLAEQPYQGLSNEEVLKFVI-DGGHLDLPENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLKD  277 (277)
T ss_pred             chHHHHHHHHHhhccCCCCCccCCHHHHHHHHh-cCCCCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHhcC
Confidence            99999999999998 999998766555544433 444556677789999999999999999999999999998863

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=99.94  E-value=1.9e-26  Score=154.93  Aligned_cols=141  Identities=24%  Similarity=0.415  Sum_probs=114.1

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccccC---------CcccCCcccCccccccCCCCCCcchh
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQR---------GRCYYPAWMSPEALQKKPGDRNLEAC   75 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~---------~~~~~~~~~~pe~~~~~~~~~~~~~~   75 (153)
                      ...++.|||++++.|+||.+.||++++++.+|+.  |||.+....         ....+..|++||.+...   ..+.++
T Consensus       122 i~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~kl~--dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~---~~~~~~  196 (273)
T cd05035         122 IALGMEYLSNRNFIHRDLAARNCMLREDMTVCVA--DFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADR---VYTSKS  196 (273)
T ss_pred             HHHHHHHHHhCCeeccccchheEEECCCCeEEEC--CccceeeccccccccccccccCCccccCHhhcccC---CCCccc
Confidence            3457899999999999999999999999988888  999974321         12345679999987653   345789


Q ss_pred             hHHHHHHHHHHHHh-CCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHhhh
Q psy12581         76 DMWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKM  151 (153)
Q Consensus        76 dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~~~  151 (153)
                      |+||+|++++|+++ |..||.+....+..... ..+.....+...+..+.+++.+||+.||++||++.++++.|+++
T Consensus       197 Dv~SlG~il~el~~~g~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~  272 (273)
T cd05035         197 DVWAFGVTMWEIATRGQTPYPGVENHEIYDYL-RHGNRLKQPEDCLDELYDLMYSCWRADPKDRPTFTKLREVLENI  272 (273)
T ss_pred             chHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH-HcCCCCCCCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence            99999999999998 88999776655544333 33445556777899999999999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>PTZ00036 glycogen synthase kinase; Provisional

Probab=99.94  E-value=6.1e-27  Score=166.90  Aligned_cols=138  Identities=16%  Similarity=0.127  Sum_probs=105.9

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeecccc-chhhccccccccccc------CCcccCCcccCccccccCCCCCCcchhhH
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDL-TARINMADAQFSFQQ------RGRCYYPAWMSPEALQKKPGDRNLEACDM   77 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~-~~kl~~~d~g~~~~~------~~~~~~~~~~~pe~~~~~~~~~~~~~~dv   77 (153)
                      ..-++.|||+++|.|+||++.||+++.++ .+||.  |||++...      ....+++.|+|||.+.+.  ..++.++|+
T Consensus       179 i~~gL~yLH~~~IiHrDLKp~NILl~~~~~~vkL~--DFGla~~~~~~~~~~~~~~t~~y~aPE~~~~~--~~~~~~~Di  254 (440)
T PTZ00036        179 LCRALAYIHSKFICHRDLKPQNLLIDPNTHTLKLC--DFGSAKNLLAGQRSVSYICSRFYRAPELMLGA--TNYTTHIDL  254 (440)
T ss_pred             HHHHHHHHHHCCEecCCcCHHHEEEcCCCCceeee--ccccchhccCCCCcccCCCCcCccCHHHhcCC--CCCCcHHHH
Confidence            34578999999999999999999998664 57888  99998432      223678899999988653  235588999


Q ss_pred             HHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhc---------------------------cccCCCCCCCHHHHHHHHHH
Q psy12581         78 WSFAVLLWELATREVPFADLTPMEVGMKVALEG---------------------------LRITIPPGISSHLSKLIRIC  130 (153)
Q Consensus        78 ~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~~~~~~~l~~~c  130 (153)
                      ||+|+++|++++|.+||.+.........+....                           .....|...+.++.+++.+|
T Consensus       255 wSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~  334 (440)
T PTZ00036        255 WSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTEDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQF  334 (440)
T ss_pred             HHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHH
Confidence            999999999999999998766554443332110                           00112344678899999999


Q ss_pred             hcCCCCCCCCHHHHHH
Q psy12581        131 MNEDPGKRPTFDMVLP  146 (153)
Q Consensus       131 l~~~p~~Rps~~~~l~  146 (153)
                      |+.+|.+|||+.++++
T Consensus       335 L~~dP~~R~ta~e~l~  350 (440)
T PTZ00036        335 LKYEPLKRLNPIEALA  350 (440)
T ss_pred             CCCChhHCcCHHHHhC
Confidence            9999999999999873

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=99.94  E-value=1.4e-26  Score=155.27  Aligned_cols=142  Identities=20%  Similarity=0.236  Sum_probs=110.5

Q ss_pred             hhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc-------CCcccCCcccCccccccCCCCCCcchhhHH
Q psy12581          6 IVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ-------RGRCYYPAWMSPEALQKKPGDRNLEACDMW   78 (153)
Q Consensus         6 ~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~-------~~~~~~~~~~~pe~~~~~~~~~~~~~~dv~   78 (153)
                      .-++.|||++++.|+||.+.||+++.++.+++.  |||.+...       ....+++.|++||.+.+.   ..+.++|+|
T Consensus       116 ~~~l~~LH~~~i~H~dl~~~nil~~~~~~~~l~--d~g~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~---~~~~~~Di~  190 (267)
T cd08228         116 CSAVEHMHSRRVMHRDIKPANVFITATGVVKLG--DLGLGRFFSSKTTAAHSLVGTPYYMSPERIHEN---GYNFKSDIW  190 (267)
T ss_pred             HHHHHHHhhCCeeCCCCCHHHEEEcCCCCEEEC--ccccceeccchhHHHhcCCCCccccChhhhccC---CCCchhhHH
Confidence            446799999999999999999999999988888  99987432       223577889999988753   345789999


Q ss_pred             HHHHHHHHHHhCCCCCCCCCch-hhhHHHHhhccccCC-CCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHhhhh
Q psy12581         79 SFAVLLWELATREVPFADLTPM-EVGMKVALEGLRITI-PPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKMK  152 (153)
Q Consensus        79 s~g~~~~~~~~g~~p~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~~~~  152 (153)
                      |+|++++++++|..||...... ............++. +...+..+.+++.+||..+|++||+++++++.|++++
T Consensus       191 slG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~~  266 (267)
T cd08228         191 SLGCLLYEMAALQSPFYGDKMNLFSLCQKIEQCDYPPLPTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQMH  266 (267)
T ss_pred             HHHHHHHHHhcCCCCCccccccHHHHHHHHhcCCCCCCChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHHhc
Confidence            9999999999999998654322 222222222222222 2356788999999999999999999999999999875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=99.94  E-value=1.9e-26  Score=154.68  Aligned_cols=141  Identities=25%  Similarity=0.432  Sum_probs=113.5

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccccC--------CcccCCcccCccccccCCCCCCcchhh
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQR--------GRCYYPAWMSPEALQKKPGDRNLEACD   76 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~--------~~~~~~~~~~pe~~~~~~~~~~~~~~d   76 (153)
                      ..-++.|||++++.|+||.+.||+++.++.+++.  |||.+....        ...++..|++||.+.+.   .++.++|
T Consensus       116 i~~al~~lH~~~iiH~dikp~nili~~~~~~~l~--dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~D  190 (266)
T cd05064         116 LASGMKYLSEMGYVHKGLAAHKVLVNSDLVCKIS--GFRRLQEDKSEAIYTTMSGKSPVLWAAPEAIQYH---HFSSASD  190 (266)
T ss_pred             HHHHHHHHHHCCEeeccccHhhEEEcCCCcEEEC--CCcccccccccchhcccCCCCceeecCHHHHhhC---CccchhH
Confidence            3456789999999999999999999999988888  999763321        12345689999988753   4558999


Q ss_pred             HHHHHHHHHHHHh-CCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHhhh
Q psy12581         77 MWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKM  151 (153)
Q Consensus        77 v~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~~~  151 (153)
                      +||+|++++++++ |..||.+......... .......+.+..++..+.+++.+||+.+|++||+++++.+.|.++
T Consensus       191 i~slG~~l~ell~~g~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~~  265 (266)
T cd05064         191 VWSFGIVMWEVMSYGERPYWDMSGQDVIKA-VEDGFRLPAPRNCPNLLHQLMLDCWQKERGERPRFSQIHSILSKM  265 (266)
T ss_pred             HHHHHHHHHHHhcCCCCCcCcCCHHHHHHH-HHCCCCCCCCCCCCHHHHHHHHHHcCCCchhCCCHHHHHHHHHhh
Confidence            9999999999775 9999987766554433 334445566777889999999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>KOG4279|consensus

Probab=99.94  E-value=6e-28  Score=173.63  Aligned_cols=136  Identities=25%  Similarity=0.333  Sum_probs=115.1

Q ss_pred             HHhhhhcCCCCCCCeeeeeeeec-cccchhhccccccccccc-------CCcccCCcccCccccccCCCCCCcchhhHHH
Q psy12581          8 YSFYLNSKKSKTSNAFLFCCQID-EDLTARINMADAQFSFQQ-------RGRCYYPAWMSPEALQKKPGDRNLEACDMWS   79 (153)
Q Consensus         8 ~~~~lh~~~i~~~ni~~~~~~~~-~~~~~kl~~~d~g~~~~~-------~~~~~~~~~~~pe~~~~~~~~~~~~~~dv~s   79 (153)
                      .++|||..+|.|+||+.+|++|+ -.|.+|++  |||.+.+.       ++..||..|||||++...+. .++..+|+||
T Consensus       687 GLkYLHen~IVHRDIKGDNVLvNTySGvlKIS--DFGTsKRLAginP~TETFTGTLQYMAPEvIDqG~R-GYG~aADIWS  763 (1226)
T KOG4279|consen  687 GLKYLHENKIVHRDIKGDNVLVNTYSGVLKIS--DFGTSKRLAGINPCTETFTGTLQYMAPEVIDQGPR-GYGKAADIWS  763 (1226)
T ss_pred             HhhhhhhcceeeccccCCcEEEeeccceEEec--ccccchhhccCCccccccccchhhhChHhhccCCc-CCCchhhhhh
Confidence            47899999999999999999997 45888999  99998554       45689999999999987654 4779999999


Q ss_pred             HHHHHHHHHhCCCCCCCCCchhhhH-HHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581         80 FAVLLWELATREVPFADLTPMEVGM-KVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus        80 ~g~~~~~~~~g~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      |||++.||.||++||.+........ ++-.-...++.|..++.++++|+.+|..++|.+||++.++++
T Consensus       764 ~GCT~vEMATGrPPF~ElgspqAAMFkVGmyKvHP~iPeelsaeak~FilrcFepd~~~R~sA~~LL~  831 (1226)
T KOG4279|consen  764 FGCTMVEMATGRPPFVELGSPQAAMFKVGMYKVHPPIPEELSAEAKNFILRCFEPDPCDRPSAKDLLQ  831 (1226)
T ss_pred             ccceeEeeccCCCCeeecCChhHhhhhhcceecCCCCcHHHHHHHHHHHHHHcCCCcccCccHHHhcc
Confidence            9999999999999998766555433 333344577889999999999999999999999999999874

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=99.94  E-value=2.4e-26  Score=154.53  Aligned_cols=142  Identities=27%  Similarity=0.416  Sum_probs=112.8

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc------CCcccCCcccCccccccCCCCCCcchhhHH
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ------RGRCYYPAWMSPEALQKKPGDRNLEACDMW   78 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~------~~~~~~~~~~~pe~~~~~~~~~~~~~~dv~   78 (153)
                      .+-+..|||++++.|+||.+.||+++.++.+|+.  |||++...      .....+..|++||.+...   .++.++|+|
T Consensus       121 i~~al~~lH~~~i~H~dikp~nili~~~~~~kl~--dfgl~~~~~~~~~~~~~~~~~~y~apE~~~~~---~~~~~~Di~  195 (270)
T cd05047         121 VARGMDYLSQKQFIHRDLAARNILVGENYVAKIA--DFGLSRGQEVYVKKTMGRLPVRWMAIESLNYS---VYTTNSDVW  195 (270)
T ss_pred             HHHHHHHHHHCCEeecccccceEEEcCCCeEEEC--CCCCccccchhhhccCCCCccccCChHHHccC---CCCchhhHH
Confidence            3457899999999999999999999999998888  99987322      112234569999988653   345789999


Q ss_pred             HHHHHHHHHHh-CCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHhhhh
Q psy12581         79 SFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKMK  152 (153)
Q Consensus        79 s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~~~~  152 (153)
                      |+|++++++++ |..||.+.........+ ........+...+..+.+++.+||..+|.+|||+.++++.|.++.
T Consensus       196 slG~il~el~~~g~~pf~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~~  269 (270)
T cd05047         196 SYGVLLWEIVSLGGTPYCGMTCAELYEKL-PQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML  269 (270)
T ss_pred             HHHHHHHHHHcCCCCCccccCHHHHHHHH-hCCCCCCCCCcCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHhh
Confidence            99999999997 99999776554443333 233344456667889999999999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=99.94  E-value=2.8e-27  Score=163.17  Aligned_cols=135  Identities=24%  Similarity=0.329  Sum_probs=110.5

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccccC----CcccCCcccCccccccCCCCCCcchhhHHHH
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQR----GRCYYPAWMSPEALQKKPGDRNLEACDMWSF   80 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~----~~~~~~~~~~pe~~~~~~~~~~~~~~dv~s~   80 (153)
                      ..-++.|||++++.|+||++.||+++.++.+|+.  |||++....    ...|++.|++||.+.+..   .+.++|+||+
T Consensus       127 i~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kl~--Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~~Diwsl  201 (329)
T PTZ00263        127 LVLAFEYLHSKDIIYRDLKPENLLLDNKGHVKVT--DFGFAKKVPDRTFTLCGTPEYLAPEVIQSKG---HGKAVDWWTM  201 (329)
T ss_pred             HHHHHHHHHHCCeeecCCCHHHEEECCCCCEEEe--eccCceEcCCCcceecCChhhcCHHHHcCCC---CCCcceeech
Confidence            3457899999999999999999999999998888  999985432    346889999999987643   4578999999


Q ss_pred             HHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCC-----HHHHHH
Q psy12581         81 AVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPT-----FDMVLP  146 (153)
Q Consensus        81 g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps-----~~~~l~  146 (153)
                      |+++|++++|..||.+.........+...  ....|...+..+.+++.+||+.||++|++     ++++++
T Consensus       202 G~il~elltg~~pf~~~~~~~~~~~i~~~--~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~  270 (329)
T PTZ00263        202 GVLLYEFIAGYPPFFDDTPFRIYEKILAG--RLKFPNWFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKN  270 (329)
T ss_pred             HHHHHHHHcCCCCCCCCCHHHHHHHHhcC--CcCCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhc
Confidence            99999999999999877665554444433  34557778899999999999999999996     576653

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=99.94  E-value=3.3e-26  Score=161.26  Aligned_cols=143  Identities=22%  Similarity=0.353  Sum_probs=116.8

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc---------CCcccCCcccCccccccCCCCCCcchh
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ---------RGRCYYPAWMSPEALQKKPGDRNLEAC   75 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~---------~~~~~~~~~~~pe~~~~~~~~~~~~~~   75 (153)
                      .+-++.|||++++.|+||.+.||+++.++.+++.  |||++...         ....++..|++||.+...   .++.++
T Consensus       248 i~~aL~~LH~~~ivHrdlkp~NiLl~~~~~~kL~--DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~  322 (401)
T cd05107         248 VANGMEFLASKNCVHRDLAARNVLICEGKLVKIC--DFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNN---LYTTLS  322 (401)
T ss_pred             HHHHHHHHhcCCcCcccCCcceEEEeCCCEEEEE--ecCcceecccccccccCCCcCCCCceeChHHhcCC---CCCcHh
Confidence            4457789999999999999999999999988888  99997432         112456789999998753   345889


Q ss_pred             hHHHHHHHHHHHHh-CCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHhhhh
Q psy12581         76 DMWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKMK  152 (153)
Q Consensus        76 dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~~~~  152 (153)
                      |+||+|++++|+++ |..||......+........+..+..|...+..+.+++.+||+.+|++||++.++++.|+++.
T Consensus       323 DvwslGvil~e~l~~g~~P~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~L~~~~  400 (401)
T cd05107         323 DVWSFGILLWEIFTLGGTPYPELPMNEQFYNAIKRGYRMAKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGDLL  400 (401)
T ss_pred             HHHHHHHHHHHHHHcCCCCCCCCCchHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHh
Confidence            99999999999998 888987765555544445555556667778899999999999999999999999999998863

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=99.94  E-value=2.8e-26  Score=154.66  Aligned_cols=140  Identities=29%  Similarity=0.458  Sum_probs=110.9

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc---------CCcccCCcccCccccccCCCCCCcchh
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ---------RGRCYYPAWMSPEALQKKPGDRNLEAC   75 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~---------~~~~~~~~~~~pe~~~~~~~~~~~~~~   75 (153)
                      .+-++.|||++++.|+|+.+.||+++.++.+++.  |||++...         ....++..|++||.+.+.   ..+.++
T Consensus       128 l~~~l~~lH~~~~vH~dlkp~Nil~~~~~~~~l~--dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~  202 (277)
T cd05062         128 IADGMAYLNANKFVHRDLAARNCMVAEDFTVKIG--DFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDG---VFTTYS  202 (277)
T ss_pred             HHHHHHHHHHCCcccCCcchheEEEcCCCCEEEC--CCCCccccCCcceeecCCCCccCHhhcChhHhhcC---CcCchh
Confidence            3456799999999999999999999999988887  99987422         112345679999998753   355889


Q ss_pred             hHHHHHHHHHHHHh-CCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHhh
Q psy12581         76 DMWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDK  150 (153)
Q Consensus        76 dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~~  150 (153)
                      |+||+|++++++++ |..||.+........... .......+...+..+.+++.+||+.+|++|||+.++++.|++
T Consensus       203 Di~slG~~l~el~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~  277 (277)
T cd05062         203 DVWSFGVVLWEIATLAEQPYQGMSNEQVLRFVM-EGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE  277 (277)
T ss_pred             HHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHH-cCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhhC
Confidence            99999999999998 788987766554443333 333344566788899999999999999999999999988763

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=99.94  E-value=2.4e-26  Score=153.68  Aligned_cols=141  Identities=23%  Similarity=0.421  Sum_probs=112.4

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccccC--------CcccCCcccCccccccCCCCCCcchhh
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQR--------GRCYYPAWMSPEALQKKPGDRNLEACD   76 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~--------~~~~~~~~~~pe~~~~~~~~~~~~~~d   76 (153)
                      ..-++.|||++++.|+||.+.||+++.++.+++.  |||.+....        ...++..|++||.+...   ..+.++|
T Consensus       112 l~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~--dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~D  186 (261)
T cd05072         112 IAEGMAYIERKNYIHRDLRAANVLVSESLMCKIA--DFGLARVIEDNEYTAREGAKFPIKWTAPEAINFG---SFTIKSD  186 (261)
T ss_pred             HHHHHHHHHHCCeeccccchhhEEecCCCcEEEC--CCccceecCCCceeccCCCccceecCCHHHhccC---CCChhhh
Confidence            3456789999999999999999999999988888  999984332        11234579999988653   3457899


Q ss_pred             HHHHHHHHHHHHh-CCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHhhh
Q psy12581         77 MWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKM  151 (153)
Q Consensus        77 v~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~~~  151 (153)
                      +||+|+++|++++ |..||.+.........+ ......+.+...+..+.+++.+||..+|++||+++++.+.|+++
T Consensus       187 i~slG~~l~~l~t~g~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~  261 (261)
T cd05072         187 VWSFGILLYEIVTYGKIPYPGMSNSDVMSAL-QRGYRMPRMENCPDELYDIMKTCWKEKAEERPTFDYLQSVLDDF  261 (261)
T ss_pred             hhhhHHHHHHHHccCCCCCCCCCHHHHHHHH-HcCCCCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHhcC
Confidence            9999999999998 99999876655544333 23334444556788999999999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=99.94  E-value=2.6e-26  Score=156.71  Aligned_cols=141  Identities=26%  Similarity=0.385  Sum_probs=108.1

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc---------CCcccCCcccCccccccCCCCCCcchh
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ---------RGRCYYPAWMSPEALQKKPGDRNLEAC   75 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~---------~~~~~~~~~~~pe~~~~~~~~~~~~~~   75 (153)
                      .+-++.|||++++.|+||++.||+++.++.+|+.  |||++...         ....++..|++||.+...   .++.++
T Consensus       147 i~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl~--DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~  221 (304)
T cd05096         147 IASGMKYLSSLNFVHRDLATRNCLVGENLTIKIA--DFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMG---KFTTAS  221 (304)
T ss_pred             HHHHHHHHHHCCccccCcchhheEEcCCccEEEC--CCccceecccCceeEecCcCCCCccccCHHHHhcC---CCCchh
Confidence            4567899999999999999999999999988888  99987432         122346789999998753   355899


Q ss_pred             hHHHHHHHHHHHHh--CCCCCCCCCchhhhHHHHh---h---ccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHH
Q psy12581         76 DMWSFAVLLWELAT--REVPFADLTPMEVGMKVAL---E---GLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPI  147 (153)
Q Consensus        76 dv~s~g~~~~~~~~--g~~p~~~~~~~~~~~~~~~---~---~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~  147 (153)
                      |+||+|+++|++++  +..||.+............   .   ......+..++..+.+++.+||+.+|++|||++++.+.
T Consensus       222 Dv~slG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~~  301 (304)
T cd05096         222 DVWAFGVTLWEILMLCKEQPYGELTDEQVIENAGEFFRDQGRQVYLFRPPPCPQGLYELMLQCWSRDCRERPSFSDIHAF  301 (304)
T ss_pred             hhHHHHHHHHHHHHccCCCCCCcCCHHHHHHHHHHHhhhccccccccCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHH
Confidence            99999999999986  5678876654443322211   1   11122345678899999999999999999999999988


Q ss_pred             Hhh
Q psy12581        148 LDK  150 (153)
Q Consensus       148 L~~  150 (153)
                      |+.
T Consensus       302 l~~  304 (304)
T cd05096         302 LTE  304 (304)
T ss_pred             HhC
Confidence            863

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=99.94  E-value=2.6e-26  Score=155.93  Aligned_cols=142  Identities=30%  Similarity=0.444  Sum_probs=114.3

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccccC---------CcccCCcccCccccccCCCCCCcchh
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQR---------GRCYYPAWMSPEALQKKPGDRNLEAC   75 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~---------~~~~~~~~~~pe~~~~~~~~~~~~~~   75 (153)
                      .+.++.|||++++.|+||.+.||+++.++.+++.  |||.+....         ...++..|++||.+.+.   ..+.++
T Consensus       141 i~~al~~LH~~~ivH~dlkp~Nil~~~~~~~kL~--Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~  215 (293)
T cd05053         141 VARGMEFLASKKCIHRDLAARNVLVTEDHVMKIA--DFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDR---VYTHQS  215 (293)
T ss_pred             HHHHHHHHHHCCccccccceeeEEEcCCCeEEeC--ccccccccccccceeccCCCCCCccccCHHHhccC---CcCccc
Confidence            4567899999999999999999999999988888  999874321         12244679999987653   345789


Q ss_pred             hHHHHHHHHHHHHh-CCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHhhhh
Q psy12581         76 DMWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKMK  152 (153)
Q Consensus        76 dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~~~~  152 (153)
                      |+||+|+++|++++ |..||.+......... ...+.....+...+..+.+++.+||..+|++|||+.++++.|+.+-
T Consensus       216 Di~slG~il~el~~~g~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~~  292 (293)
T cd05053         216 DVWSFGVLLWEIFTLGGSPYPGIPVEELFKL-LKEGYRMEKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRML  292 (293)
T ss_pred             ceeehhhHHHHHhcCCCCCCCCCCHHHHHHH-HHcCCcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHHhh
Confidence            99999999999997 8999877665544433 3344455566778899999999999999999999999999998864

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.94  E-value=3.5e-26  Score=154.63  Aligned_cols=143  Identities=23%  Similarity=0.307  Sum_probs=109.5

Q ss_pred             hhHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccccC----------CcccCCcccCccccccCCCCCCcchh
Q psy12581          6 IVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQR----------GRCYYPAWMSPEALQKKPGDRNLEAC   75 (153)
Q Consensus         6 ~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~----------~~~~~~~~~~pe~~~~~~~~~~~~~~   75 (153)
                      .-++.|||++++.|+||.+.||+++.++.+++.  |||++....          ...++..|++||.+...   ..+.++
T Consensus       117 ~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~--dfg~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~---~~~~~~  191 (283)
T cd05080         117 CEGMAYLHSQHYIHRDLAARNVLLDNDRLVKIG--DFGLAKAVPEGHEYYRVREDGDSPVFWYAVECLKEN---KFSYAS  191 (283)
T ss_pred             HHHHHHHHHCCeeccccChheEEEcCCCcEEEe--ecccccccCCcchhhccCCCCCCCceeeCHhHhccc---CCCccc
Confidence            456789999999999999999999999988888  999874321          12345579999988653   345789


Q ss_pred             hHHHHHHHHHHHHhCCCCCCCCCchh--------------hhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCH
Q psy12581         76 DMWSFAVLLWELATREVPFADLTPME--------------VGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTF  141 (153)
Q Consensus        76 dv~s~g~~~~~~~~g~~p~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~  141 (153)
                      |+||+|++++++++|..|+.......              ............+.+...+..+.+++.+||+.+|++|||+
T Consensus       192 Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~  271 (283)
T cd05080         192 DVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVRLIELLERGMRLPCPKNCPQEVYILMKNCWETEAKFRPTF  271 (283)
T ss_pred             ccHHHHHHHHHHHhCCCCCCCCcchhhhhhcccccccchhhhhhhhhcCCCCCCCCCCCHHHHHHHHHHhccChhhCCCH
Confidence            99999999999999998875432110              0011111222334456678899999999999999999999


Q ss_pred             HHHHHHHhhhhC
Q psy12581        142 DMVLPILDKMKR  153 (153)
Q Consensus       142 ~~~l~~L~~~~~  153 (153)
                      +++++.|+++.+
T Consensus       272 ~~i~~~l~~~~~  283 (283)
T cd05080         272 RSLIPILKEMHH  283 (283)
T ss_pred             HHHHHHHHHhhC
Confidence            999999998763

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=99.94  E-value=5.9e-26  Score=152.22  Aligned_cols=140  Identities=27%  Similarity=0.471  Sum_probs=112.9

Q ss_pred             hhHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccccC---------CcccCCcccCccccccCCCCCCcchhh
Q psy12581          6 IVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQR---------GRCYYPAWMSPEALQKKPGDRNLEACD   76 (153)
Q Consensus         6 ~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~---------~~~~~~~~~~pe~~~~~~~~~~~~~~d   76 (153)
                      +-++.|||++++.|+||.+.||+++.++.+++.  |||++....         ...++..|++||.+.+.   .++.++|
T Consensus       116 ~~~l~~Lh~~~i~H~di~p~nili~~~~~~~l~--dfg~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~---~~~~~~D  190 (266)
T cd05033         116 ASGMKYLSEMNYVHRDLAARNILVNSNLVCKVS--DFGLSRRLEDSEATYTTKGGKIPIRWTAPEAIAYR---KFTSASD  190 (266)
T ss_pred             HHHHHHHHhCCcccCCCCcceEEEcCCCCEEEC--ccchhhcccccccceeccCCCCCccccChhhhccC---CCccccc
Confidence            345789999999999999999999999988888  999885432         12334679999988753   3557899


Q ss_pred             HHHHHHHHHHHHh-CCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHhhh
Q psy12581         77 MWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKM  151 (153)
Q Consensus        77 v~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~~~  151 (153)
                      +|++|++++++++ |..||...........+ ......+.+...+..+.+++.+||+.+|++||+++++++.|+++
T Consensus       191 v~slG~~l~~l~~~g~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~  265 (266)
T cd05033         191 VWSFGIVMWEVMSYGERPYWDMSNQDVIKAV-EDGYRLPPPMDCPSALYQLMLDCWQKDRNERPTFSQIVSTLDKM  265 (266)
T ss_pred             hHHHHHHHHHHHccCCCCCCCCCHHHHHHHH-HcCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence            9999999999988 99999776655544333 33344455667889999999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=99.94  E-value=3.8e-26  Score=152.37  Aligned_cols=140  Identities=24%  Similarity=0.398  Sum_probs=111.3

Q ss_pred             chhhHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccccC--------CcccCCcccCccccccCCCCCCcchh
Q psy12581          4 KKIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQR--------GRCYYPAWMSPEALQKKPGDRNLEAC   75 (153)
Q Consensus         4 ~~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~--------~~~~~~~~~~pe~~~~~~~~~~~~~~   75 (153)
                      ...-++.|||++++.|+||.+.||+++.++.+++.  |||.+....        ...++..|++||.+.+.   .++.++
T Consensus       108 ~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~kl~--d~g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~  182 (256)
T cd05114         108 DVCEGMEYLERNSFIHRDLAARNCLVSSTGVVKVS--DFGMTRYVLDDEYTSSSGAKFPVKWSPPEVFNFS---KYSSKS  182 (256)
T ss_pred             HHHHHHHHHHHCCccccccCcceEEEcCCCeEEEC--CCCCccccCCCceeccCCCCCchhhCChhhcccC---ccchhh
Confidence            34556899999999999999999999999988888  999874321        11234579999998754   345789


Q ss_pred             hHHHHHHHHHHHHh-CCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHh
Q psy12581         76 DMWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILD  149 (153)
Q Consensus        76 dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~  149 (153)
                      |+||+|++++++++ |+.||...........+.. +.....|...+..+.+++.+||..+|++||+++++++.|+
T Consensus       183 Di~s~G~~l~el~~~g~~p~~~~~~~~~~~~i~~-~~~~~~~~~~~~~~~~li~~c~~~~p~~Rps~~~l~~~l~  256 (256)
T cd05114         183 DVWSFGVLMWEVFTEGKMPFEKKSNYEVVEMISR-GFRLYRPKLASMTVYEVMYSCWHEKPEGRPTFAELLRAIT  256 (256)
T ss_pred             hhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHC-CCCCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence            99999999999999 8999987766555544433 3344446667889999999999999999999999998873

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=99.94  E-value=3.3e-26  Score=158.70  Aligned_cols=143  Identities=22%  Similarity=0.348  Sum_probs=114.6

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc---------CCcccCCcccCccccccCCCCCCcchh
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ---------RGRCYYPAWMSPEALQKKPGDRNLEAC   75 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~---------~~~~~~~~~~~pe~~~~~~~~~~~~~~   75 (153)
                      .+-++.|||++++.|+||++.||+++.++.+++.  |||++...         ....++..|++||.+.+.   .++.++
T Consensus       188 i~~al~~lH~~~i~H~dikp~Nil~~~~~~~kl~--dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~  262 (343)
T cd05103         188 VAKGMEFLASRKCIHRDLAARNILLSENNVVKIC--DFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDR---VYTIQS  262 (343)
T ss_pred             HHHHHHHHHhCCeecCCCccCeEEEcCCCcEEEE--ecccccccccCcchhhcCCCCCCcceECcHHhcCC---CCCchh
Confidence            4457899999999999999999999999988888  99987432         112345679999988653   345789


Q ss_pred             hHHHHHHHHHHHHh-CCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHhhhh
Q psy12581         76 DMWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKMK  152 (153)
Q Consensus        76 dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~~~~  152 (153)
                      |+|++|++++++++ |..||...............+.....|...++.+.+++.+||+.+|++|||+.++++.|+.+.
T Consensus       263 Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~cl~~~p~~Rps~~eil~~l~~~~  340 (343)
T cd05103         263 DVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL  340 (343)
T ss_pred             hHHHHHHHHHHHHHCCCCCCCCccccHHHHHHHhccCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence            99999999999996 899987655444444444444455556667889999999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=99.94  E-value=2.1e-26  Score=162.30  Aligned_cols=143  Identities=20%  Similarity=0.347  Sum_probs=115.7

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc---------CCcccCCcccCccccccCCCCCCcchh
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ---------RGRCYYPAWMSPEALQKKPGDRNLEAC   75 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~---------~~~~~~~~~~~pe~~~~~~~~~~~~~~   75 (153)
                      .+-++.|||++++.|+||.+.||+++.++.+|+.  |||++...         ....++..|++||.+.+.   .++.++
T Consensus       246 i~~aL~~LH~~~ivH~dikp~Nill~~~~~~kL~--DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~  320 (400)
T cd05105         246 VARGMEFLASKNCVHRDLAARNVLLAQGKIVKIC--DFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDN---LYTTLS  320 (400)
T ss_pred             HHHHHHHHHhCCeeCCCCChHhEEEeCCCEEEEE--eCCcceeccccccccccCCcCCCcceEChhhhcCC---CCCchh
Confidence            3456799999999999999999999999988888  99987432         112355679999988753   345789


Q ss_pred             hHHHHHHHHHHHHh-CCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHhhhh
Q psy12581         76 DMWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKMK  152 (153)
Q Consensus        76 dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~~~~  152 (153)
                      |+||+|++++++++ |..||...............+..+..+...+..+.+++.+||+.+|++||++.++.+.|+++.
T Consensus       321 DiwSlGvil~ellt~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l~  398 (400)
T cd05105         321 DVWSYGILLWEIFSLGGTPYPGMIVDSTFYNKIKSGYRMAKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVESLL  398 (400)
T ss_pred             hHHHHHHHHHHHHHCCCCCCcccchhHHHHHHHhcCCCCCCCccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHHHc
Confidence            99999999999987 889987765444444444455555666778899999999999999999999999999998874

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=99.94  E-value=5.8e-26  Score=151.85  Aligned_cols=140  Identities=26%  Similarity=0.448  Sum_probs=112.0

Q ss_pred             hhHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccccCC--------cccCCcccCccccccCCCCCCcchhhH
Q psy12581          6 IVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQRG--------RCYYPAWMSPEALQKKPGDRNLEACDM   77 (153)
Q Consensus         6 ~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~~--------~~~~~~~~~pe~~~~~~~~~~~~~~dv   77 (153)
                      .-+..|||++++.|+||.+.||+++.++.+++.  |||.+.....        ..++..|++||...+.   ..+.++|+
T Consensus       112 ~~al~~lH~~~i~H~dl~~~Nill~~~~~~~l~--dfg~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~---~~~~~~Di  186 (260)
T cd05069         112 ADGMAYIERMNYIHRDLRAANILVGDNLVCKIA--DFGLARLIEDNEYTARQGAKFPIKWTAPEAALYG---RFTIKSDV  186 (260)
T ss_pred             HHHHHHHHhCCEeecccCcceEEEcCCCeEEEC--CCccceEccCCcccccCCCccchhhCCHHHhccC---CcChHHHH
Confidence            346789999999999999999999999988888  9998843211        1234579999987653   35588999


Q ss_pred             HHHHHHHHHHHh-CCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHhhh
Q psy12581         78 WSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKM  151 (153)
Q Consensus        78 ~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~~~  151 (153)
                      ||+|+++|++++ |..||.+.........+ ......+.+...+..+.+++++||..+|++||+++++++.|+++
T Consensus       187 ~slG~~l~el~t~g~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~  260 (260)
T cd05069         187 WSFGILLTELVTKGRVPYPGMVNREVLEQV-ERGYRMPCPQGCPESLHELMKLCWKKDPDERPTFEYIQSFLEDY  260 (260)
T ss_pred             HHHHHHHHHHHhCCCCCCCCCCHHHHHHHH-HcCCCCCCCcccCHHHHHHHHHHccCCcccCcCHHHHHHHHhcC
Confidence            999999999998 89999876655544333 33334455667889999999999999999999999999999763

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>KOG0579|consensus

Probab=99.94  E-value=1.6e-26  Score=165.18  Aligned_cols=138  Identities=24%  Similarity=0.326  Sum_probs=118.1

Q ss_pred             hHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccc-------cCCcccCCcccCccccc--cCCCCCCcchhhH
Q psy12581          7 VYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQ-------QRGRCYYPAWMSPEALQ--KKPGDRNLEACDM   77 (153)
Q Consensus         7 ~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~-------~~~~~~~~~~~~pe~~~--~~~~~~~~~~~dv   77 (153)
                      =++.|||+.+|+|+|++..||+++-+|.+++.  |||.+-.       .....|||+||+||++.  +.+...+.-++|+
T Consensus       141 dALn~LHs~~iIHRDLKAGNiL~TldGdirLA--DFGVSAKn~~t~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDi  218 (1187)
T KOG0579|consen  141 DALNWLHSQNIIHRDLKAGNILLTLDGDIRLA--DFGVSAKNKSTRQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADI  218 (1187)
T ss_pred             HHHHHHhhcchhhhhccccceEEEecCcEeee--cccccccchhHHhhhccccCCcccccchheeeccccCCCchhhhhH
Confidence            36899999999999999999999999999999  9998722       24568999999999864  3344456688999


Q ss_pred             HHHHHHHHHHHhCCCCCCCCCchhhhHHHHhh-ccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581         78 WSFAVLLWELATREVPFADLTPMEVGMKVALE-GLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus        78 ~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      ||||+++.+|.-+.+|....++...+.++... +..+-.|..++..+.+|+.+||..||+.||++.++++
T Consensus       219 WSlGITLIEMAqiEPPHhelnpMRVllKiaKSePPTLlqPS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~  288 (1187)
T KOG0579|consen  219 WSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLLQPSHWSRSFSDFLKRCLVKNPRNRPPAAQLLK  288 (1187)
T ss_pred             HhhhhHHHHHhccCCCccccchHHHHHHHhhcCCCcccCcchhhhHHHHHHHHHHhcCCccCCCHHHHhh
Confidence            99999999999999999999999888776543 3344567889999999999999999999999999875

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=99.94  E-value=7.9e-27  Score=160.59  Aligned_cols=135  Identities=21%  Similarity=0.342  Sum_probs=110.5

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc-------CCcccCCcccCccccccCCCCCCcchhhH
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ-------RGRCYYPAWMSPEALQKKPGDRNLEACDM   77 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~-------~~~~~~~~~~~pe~~~~~~~~~~~~~~dv   77 (153)
                      ..-++.|||++++.|+||++.||+++.++.+|+.  |||++...       ....|++.|++||.+.+.   .++.++|+
T Consensus       104 i~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~--Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~Di  178 (323)
T cd05595         104 IVSALEYLHSRDVVYRDIKLENLMLDKDGHIKIT--DFGLCKEGISDGATMKTFCGTPEYLAPEVLEDN---DYGRAVDW  178 (323)
T ss_pred             HHHHHHHHHHCCeEecCCCHHHEEEcCCCCEEec--ccHHhccccCCCCccccccCCcCcCCcccccCC---CCCchhch
Confidence            4457899999999999999999999999998888  99987431       224688999999998754   34588999


Q ss_pred             HHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCC-----CHHHHHH
Q psy12581         78 WSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRP-----TFDMVLP  146 (153)
Q Consensus        78 ~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----s~~~~l~  146 (153)
                      ||+|+++|++++|..||.+.........+...  ....|...++.+.+++.+||..||++|+     ++.++++
T Consensus       179 wSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~--~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~  250 (323)
T cd05595         179 WGLGVVMYEMMCGRLPFYNQDHERLFELILME--EIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME  250 (323)
T ss_pred             hhhHHHHHHHHhCCCCCCCCCHHHHHHHHhcC--CCCCCCCCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHc
Confidence            99999999999999999877665554444433  3345677899999999999999999998     7887764

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=99.94  E-value=4.8e-27  Score=161.98  Aligned_cols=135  Identities=22%  Similarity=0.336  Sum_probs=110.6

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc-------CCcccCCcccCccccccCCCCCCcchhhH
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ-------RGRCYYPAWMSPEALQKKPGDRNLEACDM   77 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~-------~~~~~~~~~~~pe~~~~~~~~~~~~~~dv   77 (153)
                      ..-++.|||++++.|+||++.||+++.++.+|+.  |||++...       ...+|++.|++||.+.+.   .++.++|+
T Consensus       104 i~~aL~~LH~~~ivHrDikp~NIll~~~~~~kL~--DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~Di  178 (328)
T cd05593         104 IVSALDYLHSGKIVYRDLKLENLMLDKDGHIKIT--DFGLCKEGITDAATMKTFCGTPEYLAPEVLEDN---DYGRAVDW  178 (328)
T ss_pred             HHHHHHHHHhCCeEecccCHHHeEECCCCcEEEe--cCcCCccCCCcccccccccCCcCccChhhhcCC---CCCccCCc
Confidence            4567899999999999999999999999998888  99987432       223688999999998764   34578999


Q ss_pred             HHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCC-----CHHHHHH
Q psy12581         78 WSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRP-----TFDMVLP  146 (153)
Q Consensus        78 ~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----s~~~~l~  146 (153)
                      ||+|+++|++++|+.||.+.........+...  ....|...+..+.+++.+||+.||++|+     ++.++++
T Consensus       179 wslGvil~elltG~~Pf~~~~~~~~~~~~~~~--~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~  250 (328)
T cd05593         179 WGLGVVMYEMMCGRLPFYNQDHEKLFELILME--DIKFPRTLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMR  250 (328)
T ss_pred             cccchHHHHHhhCCCCCCCCCHHHHHHHhccC--CccCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhc
Confidence            99999999999999999876655544443322  3445777899999999999999999997     7888875

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.94  E-value=2.7e-26  Score=153.50  Aligned_cols=138  Identities=22%  Similarity=0.280  Sum_probs=112.6

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc----------CCcccCCcccCccccccCCCCCCcch
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ----------RGRCYYPAWMSPEALQKKPGDRNLEA   74 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~----------~~~~~~~~~~~pe~~~~~~~~~~~~~   74 (153)
                      ..-+..|||+.++.|+||.+.||+++.++.+++.  |||.+...          ....++..|++||.+.+.   ..+.+
T Consensus       113 l~~~l~~lH~~~i~H~dl~p~nilv~~~~~~~l~--dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~  187 (263)
T cd06625         113 ILEGVEYLHSNMIVHRDIKGANILRDSAGNVKLG--DFGASKRLQTICSSGTGMKSVTGTPYWMSPEVISGE---GYGRK  187 (263)
T ss_pred             HHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEe--ecccceeccccccccccccCCCcCccccCcceeccC---CCCch
Confidence            3456789999999999999999999999988888  99987422          123466789999998864   35588


Q ss_pred             hhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHH
Q psy12581         75 CDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPI  147 (153)
Q Consensus        75 ~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~  147 (153)
                      +|+||+|+++|++++|+.||.....................+...+..+.+++.+||..+|++|||+.++++.
T Consensus       188 ~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~  260 (263)
T cd06625         188 ADVWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQPTNPQLPSHVSPDARNFLRRTFVENAKKRPSAEELLRH  260 (263)
T ss_pred             hhhHHHHHHHHHHHhCCCCccccchHHHHHHHhccCCCCCCCccCCHHHHHHHHHHhhcCcccCCCHHHHhhC
Confidence            9999999999999999999987665555444444444556677789999999999999999999999999864

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>KOG1024|consensus

Probab=99.94  E-value=1.8e-26  Score=156.46  Aligned_cols=143  Identities=28%  Similarity=0.480  Sum_probs=122.0

Q ss_pred             chhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc---------CCcccCCcccCccccccCCCCCCcch
Q psy12581          4 KKIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ---------RGRCYYPAWMSPEALQKKPGDRNLEA   74 (153)
Q Consensus         4 ~~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~---------~~~~~~~~~~~pe~~~~~~~~~~~~~   74 (153)
                      -..++..|||.++++|.||..+||.||+.-.+|+.  |-.++...         .+.-.+..||++|.+...   .++..
T Consensus       404 Qla~am~hlh~~~ViHkDiAaRNCvIdd~LqVklt--DsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~---~yssa  478 (563)
T KOG1024|consen  404 QLAMAMEHLHNHGVIHKDIAARNCVIDDQLQVKLT--DSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNS---HYSSA  478 (563)
T ss_pred             HHHHHHHHHHhcCcccchhhhhcceehhheeEEec--cchhccccCcccccccCCCCCCcccccCHHHHhhh---hhcch
Confidence            45678899999999999999999999999777777  77766332         223445689999999864   56689


Q ss_pred             hhHHHHHHHHHHHHh-CCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHhhhh
Q psy12581         75 CDMWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKMK  152 (153)
Q Consensus        75 ~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~~~~  152 (153)
                      +|+||||+++||++| |+.||-+.++.+.... +.++++...|.+++.++..++..||...|+.||+++++..+|.++.
T Consensus       479 sDvWsfGVllWELmtlg~~PyaeIDPfEm~~y-lkdGyRlaQP~NCPDeLf~vMacCWallpeeRPsf~Qlv~cLseF~  556 (563)
T KOG1024|consen  479 SDVWSFGVLLWELMTLGKLPYAEIDPFEMEHY-LKDGYRLAQPFNCPDELFTVMACCWALLPEERPSFSQLVICLSEFH  556 (563)
T ss_pred             hhhHHHHHHHHHHHhcCCCCccccCHHHHHHH-HhccceecCCCCCcHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHH
Confidence            999999999999988 9999988887776544 5588899999999999999999999999999999999999998763

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=99.94  E-value=1.3e-26  Score=159.57  Aligned_cols=135  Identities=21%  Similarity=0.304  Sum_probs=109.4

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc-------CCcccCCcccCccccccCCCCCCcchhhH
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ-------RGRCYYPAWMSPEALQKKPGDRNLEACDM   77 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~-------~~~~~~~~~~~pe~~~~~~~~~~~~~~dv   77 (153)
                      ..-++.|||++++.|+||++.||+++.++.+|+.  |||++...       ....|++.|++||.+.+.   .++.++|+
T Consensus       110 i~~al~~lH~~~ivHrdlkp~Nill~~~~~~kL~--Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~---~~~~~~Di  184 (324)
T cd05589         110 VVLGLQYLHENKIVYRDLKLDNLLLDTEGFVKIA--DFGLCKEGMGFGDRTSTFCGTPEFLAPEVLTET---SYTRAVDW  184 (324)
T ss_pred             HHHHHHHHHhCCeEecCCCHHHeEECCCCcEEeC--cccCCccCCCCCCcccccccCccccCHhHhcCC---CCCcccch
Confidence            3457899999999999999999999999988888  99987421       234688999999998764   34578999


Q ss_pred             HHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCC-----CHHHHHH
Q psy12581         78 WSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRP-----TFDMVLP  146 (153)
Q Consensus        78 ~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----s~~~~l~  146 (153)
                      ||+|+++|++++|+.||.+.........+...  ....|...+..+.+++.+||+.||++||     ++.++++
T Consensus       185 wslG~il~el~~G~~pf~~~~~~~~~~~i~~~--~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~  256 (324)
T cd05589         185 WGLGVLIYEMLVGESPFPGDDEEEVFDSIVND--EVRYPRFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKK  256 (324)
T ss_pred             hhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhC--CCCCCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhh
Confidence            99999999999999999887666555544433  3345677899999999999999999999     4666554

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>KOG0605|consensus

Probab=99.94  E-value=1.5e-26  Score=161.28  Aligned_cols=135  Identities=20%  Similarity=0.246  Sum_probs=113.8

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc------------------------------------
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ------------------------------------   48 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~------------------------------------   48 (153)
                      .+.|..-||+.|++|+||+++|.+||..|++|++  |||++...                                    
T Consensus       250 ~vlAI~~iH~~gyIHRDIKPdNlLiD~~GHiKLS--DFGLs~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  327 (550)
T KOG0605|consen  250 TVLAIESIHQLGYIHRDIKPDNLLIDAKGHIKLS--DFGLSTGLDKKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRST  327 (550)
T ss_pred             HHHHHHHHHHcCcccccCChhheeecCCCCEeec--cccccchhhhhhhhhhhcchhhhhhhhccCCCccccccccccch
Confidence            4678889999999999999999999999999999  99998100                                    


Q ss_pred             ------------------CCcccCCcccCccccccCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhc
Q psy12581         49 ------------------RGRCYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEG  110 (153)
Q Consensus        49 ------------------~~~~~~~~~~~pe~~~~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~  110 (153)
                                        ....|||.|+|||++.+..   ++..+|.||+||++||++.|.+||.+..+.+...+++...
T Consensus       328 ~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kg---Y~~~cDwWSLG~ImyEmLvGyPPF~s~tp~~T~rkI~nwr  404 (550)
T KOG0605|consen  328 MSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKG---YGKECDWWSLGCIMYEMLVGYPPFCSETPQETYRKIVNWR  404 (550)
T ss_pred             hhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCC---CCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHh
Confidence                              1127899999999999864   4488999999999999999999999999999998887765


Q ss_pred             cccCCCC--CCCHHHHHHHHHHhcCCCCCCCC---HHHHH
Q psy12581        111 LRITIPP--GISSHLSKLIRICMNEDPGKRPT---FDMVL  145 (153)
Q Consensus       111 ~~~~~~~--~~~~~~~~l~~~cl~~~p~~Rps---~~~~l  145 (153)
                      ..+..|.  ..+.++.++|.+|+. ||++|..   ++||.
T Consensus       405 ~~l~fP~~~~~s~eA~DLI~rll~-d~~~RLG~~G~~EIK  443 (550)
T KOG0605|consen  405 ETLKFPEEVDLSDEAKDLITRLLC-DPENRLGSKGAEEIK  443 (550)
T ss_pred             hhccCCCcCcccHHHHHHHHHHhc-CHHHhcCcccHHHHh
Confidence            4555554  478999999999999 9999975   55553

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=99.94  E-value=2.5e-26  Score=156.78  Aligned_cols=141  Identities=28%  Similarity=0.417  Sum_probs=111.6

Q ss_pred             hhHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccccC------CcccCCcccCccccccCCCCCCcchhhHHH
Q psy12581          6 IVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQR------GRCYYPAWMSPEALQKKPGDRNLEACDMWS   79 (153)
Q Consensus         6 ~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~------~~~~~~~~~~pe~~~~~~~~~~~~~~dv~s   79 (153)
                      .-+..|||++++.|+||.+.||+++.++.+++.  |||++....      ....+..|++||.+.+.   ..+.++|+||
T Consensus       134 ~~al~~LH~~gi~H~dlkp~Nili~~~~~~kl~--dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~s  208 (303)
T cd05088         134 ARGMDYLSQKQFIHRDLAARNILVGENYVAKIA--DFGLSRGQEVYVKKTMGRLPVRWMAIESLNYS---VYTTNSDVWS  208 (303)
T ss_pred             HHHHHHHHhCCccccccchheEEecCCCcEEeC--ccccCcccchhhhcccCCCcccccCHHHHhcc---CCcccccchh
Confidence            456799999999999999999999999988888  999874221      12234579999988653   3457899999


Q ss_pred             HHHHHHHHHh-CCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHhhhh
Q psy12581         80 FAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKMK  152 (153)
Q Consensus        80 ~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~~~~  152 (153)
                      +|++++++++ |..||......+.... .........+...+..+.+++.+||+.+|++||+++++++.|.++.
T Consensus       209 lG~il~ellt~g~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~~  281 (303)
T cd05088         209 YGVLLWEIVSLGGTPYCGMTCAELYEK-LPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML  281 (303)
T ss_pred             hhhHHHHHHhcCCCCcccCChHHHHHH-HhcCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence            9999999998 9999977655444332 2333344456667889999999999999999999999999988763

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=99.94  E-value=4.5e-26  Score=152.25  Aligned_cols=142  Identities=19%  Similarity=0.296  Sum_probs=114.2

Q ss_pred             chhhHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccccC----------CcccCCcccCccccccCCCCCCcc
Q psy12581          4 KKIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQR----------GRCYYPAWMSPEALQKKPGDRNLE   73 (153)
Q Consensus         4 ~~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~----------~~~~~~~~~~pe~~~~~~~~~~~~   73 (153)
                      ...-+..|||++++.|+||.+.||+++.++.+|+.  |||.+....          ...++..|++||.+...   ..+.
T Consensus       103 ~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~--dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~  177 (257)
T cd05115         103 QVSMGMKYLEGKNFVHRDLAARNVLLVNQHYAKIS--DFGLSKALGADDSYYKARSAGKWPLKWYAPECINFR---KFSS  177 (257)
T ss_pred             HHHHHHHHHHhcCeeecccchheEEEcCCCcEEec--cCCccccccCCccceeccCCCCCCcccCCHHHHccC---CCCc
Confidence            34557799999999999999999999999988888  999874221          11224679999988754   3457


Q ss_pred             hhhHHHHHHHHHHHHh-CCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHhhh
Q psy12581         74 ACDMWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKM  151 (153)
Q Consensus        74 ~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~~~  151 (153)
                      ++|+||+|+++|++++ |..||.......... ....+.....+...+.++.+++.+||..+|++||++.++.+.|+.+
T Consensus       178 ~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~~  255 (257)
T cd05115         178 RSDVWSYGITMWEAFSYGQKPYKKMKGPEVMS-FIEQGKRLDCPAECPPEMYALMKDCWIYKWEDRPNFAKVEERMRTY  255 (257)
T ss_pred             hhhHHHHHHHHHHHhcCCCCCcCcCCHHHHHH-HHHCCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhhh
Confidence            8999999999999996 999998776555443 3344445566777889999999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=99.94  E-value=1.1e-26  Score=159.83  Aligned_cols=135  Identities=17%  Similarity=0.246  Sum_probs=110.5

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc-------CCcccCCcccCccccccCCCCCCcchhhH
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ-------RGRCYYPAWMSPEALQKKPGDRNLEACDM   77 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~-------~~~~~~~~~~~pe~~~~~~~~~~~~~~dv   77 (153)
                      ..-++.|||++++.|+||++.||+++.++.+||.  |||++...       ....|++.|++||.+.+.   ..+.++|+
T Consensus       109 i~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~--Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~Di  183 (323)
T cd05584         109 ISLALEHLHQQGIIYRDLKPENILLDAQGHVKLT--DFGLCKESIHEGTVTHTFCGTIEYMAPEILMRS---GHGKAVDW  183 (323)
T ss_pred             HHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEe--eCcCCeecccCCCcccccCCCccccChhhccCC---CCCCccee
Confidence            3456899999999999999999999999998888  99987321       223688999999998764   34478999


Q ss_pred             HHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCC-----CHHHHHH
Q psy12581         78 WSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRP-----TFDMVLP  146 (153)
Q Consensus        78 ~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----s~~~~l~  146 (153)
                      ||+|+++|++++|+.||.+.........+...  ....|...+..+.+++.+||+.+|++||     +++++++
T Consensus       184 wslG~il~ell~G~~pf~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~  255 (323)
T cd05584         184 WSLGALMYDMLTGAPPFTAENRKKTIDKILKG--KLNLPPYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQS  255 (323)
T ss_pred             cccHHHHHHHhcCCCCCCCCCHHHHHHHHHcC--CCCCCCCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhc
Confidence            99999999999999999887665554444433  3455777899999999999999999999     7887764

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=99.94  E-value=6.1e-27  Score=160.99  Aligned_cols=135  Identities=18%  Similarity=0.287  Sum_probs=110.6

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc-------CCcccCCcccCccccccCCCCCCcchhhH
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ-------RGRCYYPAWMSPEALQKKPGDRNLEACDM   77 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~-------~~~~~~~~~~~pe~~~~~~~~~~~~~~dv   77 (153)
                      ..-++.|||++++.|+||++.||+++.++.+|+.  |||++...       ....|++.|++||.+.+.   .++.++|+
T Consensus       105 i~~aL~~LH~~~ivHrDikp~Nill~~~~~~kL~--Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~Dv  179 (321)
T cd05591         105 VTLALMFLHRHGVIYRDLKLDNILLDAEGHCKLA--DFGMCKEGILNGVTTTTFCGTPDYIAPEILQEL---EYGPSVDW  179 (321)
T ss_pred             HHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEe--ecccceecccCCccccccccCccccCHHHHcCC---CCCCccce
Confidence            4557899999999999999999999999998888  99987431       233678999999998764   34578999


Q ss_pred             HHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCC-------CHHHHHH
Q psy12581         78 WSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRP-------TFDMVLP  146 (153)
Q Consensus        78 ~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-------s~~~~l~  146 (153)
                      ||+|+++|++++|+.||.+.........+...  ....|...+.++.+++.+||+.+|++|+       +++++++
T Consensus       180 wslG~il~el~tg~~Pf~~~~~~~~~~~i~~~--~~~~p~~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~  253 (321)
T cd05591         180 WALGVLMYEMMAGQPPFEADNEDDLFESILHD--DVLYPVWLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQ  253 (321)
T ss_pred             echhHHHHHHhcCCCCCCCCCHHHHHHHHHcC--CCCCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhc
Confidence            99999999999999999887766655555433  2334666889999999999999999999       7777764

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=99.94  E-value=6e-26  Score=151.73  Aligned_cols=140  Identities=26%  Similarity=0.397  Sum_probs=111.7

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccccCC--------cccCCcccCccccccCCCCCCcchhh
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQRG--------RCYYPAWMSPEALQKKPGDRNLEACD   76 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~~--------~~~~~~~~~pe~~~~~~~~~~~~~~d   76 (153)
                      ..-++.|||++++.|+||.+.||+++.++.+++.  |||.+.....        ..++..|++||...+.   ..+.++|
T Consensus       111 l~~al~~lH~~~i~H~di~p~Nili~~~~~~~l~--dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~D  185 (260)
T cd05070         111 VAAGMAYIERMNYIHRDLRSANILVGDGLVCKIA--DFGLARLIEDNEYTARQGAKFPIKWTAPEAALYG---RFTIKSD  185 (260)
T ss_pred             HHHHHHHHHHCCcccCCCccceEEEeCCceEEeC--CceeeeeccCcccccccCCCCCccccChHHHhcC---CCcchhh
Confidence            3456789999999999999999999999888887  9998743211        1234579999987653   3457899


Q ss_pred             HHHHHHHHHHHHh-CCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHhh
Q psy12581         77 MWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDK  150 (153)
Q Consensus        77 v~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~~  150 (153)
                      +||+|++++++++ |..||.+....+....+ ......+.+...+..+.+++.+||..+|++|||+.++.+.|++
T Consensus       186 i~slG~~l~~l~~~g~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~  259 (260)
T cd05070         186 VWSFGILLTELVTKGRVPYPGMNNREVLEQV-ERGYRMPCPQDCPISLHELMLQCWKKDPEERPTFEYLQSFLED  259 (260)
T ss_pred             hHHHHHHHHHHHhcCCCCCCCCCHHHHHHHH-HcCCCCCCCCcCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence            9999999999998 89999776655544433 3334455566788999999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=99.94  E-value=7.9e-26  Score=154.35  Aligned_cols=142  Identities=27%  Similarity=0.410  Sum_probs=113.8

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccccC---------CcccCCcccCccccccCCCCCCcchh
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQR---------GRCYYPAWMSPEALQKKPGDRNLEAC   75 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~---------~~~~~~~~~~pe~~~~~~~~~~~~~~   75 (153)
                      ..-++.|||++++.|+||.+.||+++.++.+|+.  |||.+....         ...++..|++||.+.+.   .++.++
T Consensus       146 i~~al~~LH~~givH~dlkp~Nili~~~~~~kl~--D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~  220 (304)
T cd05101         146 VARGMEYLASQKCIHRDLAARNVLVTENNVMKIA--DFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDR---VYTHQS  220 (304)
T ss_pred             HHHHHHHHHHCCeeecccccceEEEcCCCcEEEC--CCccceecccccccccccCCCCCceeeCchhhccC---CCCchh
Confidence            3456799999999999999999999999988888  999874321         12345679999988653   345789


Q ss_pred             hHHHHHHHHHHHHh-CCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHhhhh
Q psy12581         76 DMWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKMK  152 (153)
Q Consensus        76 dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~~~~  152 (153)
                      |+||+|+++|++++ |..||.+......... .........+...+..+.+++.+||..+|++|||+.++++.|.++.
T Consensus       221 Di~slG~~l~el~~~g~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~~  297 (304)
T cd05101         221 DVWSFGVLMWEIFTLGGSPYPGIPVEELFKL-LKEGHRMDKPANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRIL  297 (304)
T ss_pred             hHHHHHHHHHHHHcCCCCCcccCCHHHHHHH-HHcCCcCCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHHH
Confidence            99999999999998 7888877655444333 3344444556678899999999999999999999999999998874

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=99.94  E-value=7.3e-27  Score=160.56  Aligned_cols=130  Identities=18%  Similarity=0.280  Sum_probs=107.3

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc-------CCcccCCcccCccccccCCCCCCcchhhH
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ-------RGRCYYPAWMSPEALQKKPGDRNLEACDM   77 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~-------~~~~~~~~~~~pe~~~~~~~~~~~~~~dv   77 (153)
                      ..-++.|||++++.|+||++.||+++.++.+++.  |||++...       ....|++.|++||.+.+.   .++.++|+
T Consensus       105 l~~~L~~lH~~~ivH~dlkp~NIli~~~~~~kL~--DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~Di  179 (320)
T cd05590         105 ITSALMFLHDKGIIYRDLKLDNVLLDHEGHCKLA--DFGMCKEGIFNGKTTSTFCGTPDYIAPEILQEM---LYGPSVDW  179 (320)
T ss_pred             HHHHHHHHHHCCeEeCCCCHHHeEECCCCcEEEe--eCCCCeecCcCCCcccccccCccccCHHHHcCC---CCCCccch
Confidence            4557899999999999999999999999988888  99987432       234688999999998764   34578999


Q ss_pred             HHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCH
Q psy12581         78 WSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTF  141 (153)
Q Consensus        78 ~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~  141 (153)
                      ||+|+++|++++|..||.+.........+...  ....|...+..+.+++++||+.||++|+++
T Consensus       180 wslG~il~el~~g~~Pf~~~~~~~~~~~i~~~--~~~~~~~~~~~~~~li~~~L~~dP~~R~~~  241 (320)
T cd05590         180 WAMGVLLYEMLCGHAPFEAENEDDLFEAILND--EVVYPTWLSQDAVDILKAFMTKNPTMRLGS  241 (320)
T ss_pred             hhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcC--CCCCCCCCCHHHHHHHHHHcccCHHHCCCC
Confidence            99999999999999999887766555444433  334566788999999999999999999997

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=99.94  E-value=1e-26  Score=157.47  Aligned_cols=137  Identities=18%  Similarity=0.197  Sum_probs=107.6

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc------CCcccCCcccCccccccCCCCCCcchhhHH
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ------RGRCYYPAWMSPEALQKKPGDRNLEACDMW   78 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~------~~~~~~~~~~~pe~~~~~~~~~~~~~~dv~   78 (153)
                      ..-++.|||++++.|+||++.||+++.++.+++.  |||++...      ....|+..|++||.+.+.   .++.++|+|
T Consensus       111 i~~~l~~lH~~~iiH~dikp~Nill~~~~~~kl~--Dfg~~~~~~~~~~~~~~~g~~~y~aPE~~~~~---~~~~~~Dvw  185 (285)
T cd05631         111 LCCGLEDLQRERIVYRDLKPENILLDDRGHIRIS--DLGLAVQIPEGETVRGRVGTVGYMAPEVINNE---KYTFSPDWW  185 (285)
T ss_pred             HHHHHHHHHhCCEEeCCCCHHHEEECCCCCEEEe--eCCCcEEcCCCCeecCCCCCCCccCHhhhcCC---CCCcccCch
Confidence            3456789999999999999999999999988888  99998432      234678999999999764   345789999


Q ss_pred             HHHHHHHHHHhCCCCCCCCCchhhhHHHHh--hccccCCCCCCCHHHHHHHHHHhcCCCCCCCC-----HHHHHH
Q psy12581         79 SFAVLLWELATREVPFADLTPMEVGMKVAL--EGLRITIPPGISSHLSKLIRICMNEDPGKRPT-----FDMVLP  146 (153)
Q Consensus        79 s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps-----~~~~l~  146 (153)
                      |+|+++|++++|+.||.+............  .......+...+..+.+++.+||..||++||+     ++++++
T Consensus       186 slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~  260 (285)
T cd05631         186 GLGCLIYEMIQGQSPFRKRKERVKREEVDRRVKEDQEEYSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQ  260 (285)
T ss_pred             hHHHHHHHHHhCCCCCCCCCcchhHHHHHHHhhcccccCCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhc
Confidence            999999999999999987554322111111  12233456678899999999999999999997     777775

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=99.94  E-value=1e-26  Score=159.62  Aligned_cols=134  Identities=25%  Similarity=0.307  Sum_probs=109.2

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc-------CCcccCCcccCccccccCCCCCCcchhhH
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ-------RGRCYYPAWMSPEALQKKPGDRNLEACDM   77 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~-------~~~~~~~~~~~pe~~~~~~~~~~~~~~dv   77 (153)
                      ..-++.|||++++.|+||.+.||+++.++.+|+.  |||++...       ...+|++.|++||.+.+.   .++.++|+
T Consensus       105 i~~al~~LH~~~ivH~dlkp~Nill~~~~~~kL~--Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~Dv  179 (316)
T cd05592         105 IICGLQFLHKKGIIYRDLKLDNVLLDKDGHIKIA--DFGMCKENMNGEGKASTFCGTPDYIAPEILKGQ---KYNESVDW  179 (316)
T ss_pred             HHHHHHHHHHCCEEeCCCCHHHeEECCCCCEEEc--cCcCCeECCCCCCccccccCCccccCHHHHcCC---CCCCcccc
Confidence            4557899999999999999999999999988888  99987432       234689999999998764   34578999


Q ss_pred             HHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHH-HHH
Q psy12581         78 WSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFD-MVL  145 (153)
Q Consensus        78 ~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~-~~l  145 (153)
                      ||+|++++++++|..||.+.........+..  ..+..|...+..+.+++.+||+.+|++||++. +++
T Consensus       180 wslG~il~ell~G~~Pf~~~~~~~~~~~i~~--~~~~~~~~~~~~~~~ll~~~l~~~P~~R~~~~~~l~  246 (316)
T cd05592         180 WSFGVLLYEMLIGQSPFHGEDEDELFDSILN--DRPHFPRWISKEAKDCLSKLFERDPTKRLGVDGDIR  246 (316)
T ss_pred             hhHHHHHHHHHhCCCCCCCCCHHHHHHHHHc--CCCCCCCCCCHHHHHHHHHHccCCHHHcCCChHHHH
Confidence            9999999999999999988766555444332  24455677899999999999999999999864 454

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>KOG0589|consensus

Probab=99.94  E-value=1.2e-26  Score=160.57  Aligned_cols=136  Identities=21%  Similarity=0.298  Sum_probs=119.7

Q ss_pred             hhHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccccC-------CcccCCcccCccccccCCCCCCcchhhHH
Q psy12581          6 IVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQR-------GRCYYPAWMSPEALQKKPGDRNLEACDMW   78 (153)
Q Consensus         6 ~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~-------~~~~~~~~~~pe~~~~~~~~~~~~~~dv~   78 (153)
                      -.+..|||++.|.|++++..||+.++++.+|+.  |||++....       +..||+.|++||.+.+.+++   .++|+|
T Consensus       116 ~~av~ylH~~~iLHRDlK~~Nifltk~~~VkLg--DfGlaK~l~~~~~~a~tvvGTp~YmcPEil~d~pYn---~KSDiW  190 (426)
T KOG0589|consen  116 LLAVNYLHENRVLHRDLKCANIFLTKDKKVKLG--DFGLAKILNPEDSLASTVVGTPYYMCPEILSDIPYN---EKSDIW  190 (426)
T ss_pred             HHHHHHHHhhhhhcccchhhhhhccccCceeec--chhhhhhcCCchhhhheecCCCcccCHHHhCCCCCC---ccCcch
Confidence            367899999999999999999999999988888  999995443       34799999999999987555   899999


Q ss_pred             HHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHH
Q psy12581         79 SFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPI  147 (153)
Q Consensus        79 s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~  147 (153)
                      |+||++||+++-+++|.+.+-.....++.... ..+.|...+.+++.+++.|+..+|+.||++.+++..
T Consensus       191 sLGC~~yEm~~lk~aF~a~~m~~Li~ki~~~~-~~Plp~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~  258 (426)
T KOG0589|consen  191 SLGCCLYEMCTLKPAFKASNMSELILKINRGL-YSPLPSMYSSELRSLVKSMLRKNPEHRPSALELLRR  258 (426)
T ss_pred             hhcchHHHHHhcccccCccchHHHHHHHhhcc-CCCCCccccHHHHHHHHHHhhcCCccCCCHHHHhhC
Confidence            99999999999999999988888777776544 566788899999999999999999999999999864

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=99.94  E-value=4.2e-26  Score=153.98  Aligned_cols=142  Identities=29%  Similarity=0.514  Sum_probs=114.2

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccccC---------CcccCCcccCccccccCCCCCCcchh
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQR---------GRCYYPAWMSPEALQKKPGDRNLEAC   75 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~---------~~~~~~~~~~pe~~~~~~~~~~~~~~   75 (153)
                      ..-++.|||++++.|+||.+.||+++.++.+|+.  |||++....         ...++..|++||.+.+.   ..+.++
T Consensus       126 i~~~l~~LH~~~i~H~di~p~nil~~~~~~~kl~--d~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~---~~~~~~  200 (280)
T cd05043         126 IACGMSYLHKRGVIHKDIAARNCVIDEELQVKIT--DNALSRDLFPMDYHCLGDNENRPVKWMALESLVNK---EYSSAS  200 (280)
T ss_pred             HHHHHHHHHHCCEeecccCHhhEEEcCCCcEEEC--CCCCcccccCCceEEeCCCCCcchhccCHHHHhcC---CCCchh
Confidence            4557899999999999999999999999988888  999984321         12345579999988754   345889


Q ss_pred             hHHHHHHHHHHHHh-CCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHhhhh
Q psy12581         76 DMWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKMK  152 (153)
Q Consensus        76 dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~~~~  152 (153)
                      |+||+|++++++++ |+.||.......... ..........+...+..+.+++.+||..+|++|||+.++++.|+.+.
T Consensus       201 Di~slG~~l~el~~~g~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~  277 (280)
T cd05043         201 DVWSFGVLLWELMTLGQTPYVEIDPFEMAA-YLKDGYRLAQPINCPDELFAVMACCWALDPEERPSFSQLVQCLTDFH  277 (280)
T ss_pred             hHHHhHHHHHHHhcCCCCCcCcCCHHHHHH-HHHcCCCCCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHH
Confidence            99999999999998 999998766544333 33344444455667889999999999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=99.94  E-value=1.1e-26  Score=159.53  Aligned_cols=135  Identities=19%  Similarity=0.278  Sum_probs=110.0

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc-------CCcccCCcccCccccccCCCCCCcchhhH
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ-------RGRCYYPAWMSPEALQKKPGDRNLEACDM   77 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~-------~~~~~~~~~~~pe~~~~~~~~~~~~~~dv   77 (153)
                      ..-++.|||++++.|+||.+.||+++.++.+++.  |||++...       ...++++.|++||.+.+.   .++.++|+
T Consensus       105 i~~~l~~LH~~~ivH~dlkp~Nill~~~~~~kl~--Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~---~~~~~~Di  179 (318)
T cd05570         105 IVLGLQFLHERGIIYRDLKLDNVLLDSEGHIKIA--DFGMCKEGILGGVTTSTFCGTPDYIAPEILSYQ---PYGPAVDW  179 (318)
T ss_pred             HHHHHHHHHhCCeEccCCCHHHeEECCCCcEEec--ccCCCeecCcCCCcccceecCccccCHHHhcCC---CCCcchhh
Confidence            4457899999999999999999999999988888  99987331       223578899999998764   34578999


Q ss_pred             HHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCH-----HHHHH
Q psy12581         78 WSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTF-----DMVLP  146 (153)
Q Consensus        78 ~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~-----~~~l~  146 (153)
                      ||+|+++|++++|+.||.+.........+...  ....|...+..+.+++.+||+.||++||++     .++++
T Consensus       180 wslGvil~~l~~G~~pf~~~~~~~~~~~i~~~--~~~~~~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~  251 (318)
T cd05570         180 WALGVLLYEMLAGQSPFEGDDEDELFQSILED--EVRYPRWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKG  251 (318)
T ss_pred             hhHHHHHHHHhhCCCCCCCCCHHHHHHHHHcC--CCCCCCcCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhc
Confidence            99999999999999999877655554444333  334566789999999999999999999998     76654

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>KOG0596|consensus

Probab=99.94  E-value=6e-27  Score=164.09  Aligned_cols=137  Identities=17%  Similarity=0.240  Sum_probs=102.7

Q ss_pred             hHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccc---------cCCcccCCcccCccccccCCC--------C
Q psy12581          7 VYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQ---------QRGRCYYPAWMSPEALQKKPG--------D   69 (153)
Q Consensus         7 ~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~---------~~~~~~~~~~~~pe~~~~~~~--------~   69 (153)
                      .+..++|..||+|+|+++.|.++-++ .+|+.  |||++..         ....+||+.||+||.+.....        .
T Consensus       471 ~aV~~IH~~gIVHSDLKPANFLlVkG-~LKLI--DFGIA~aI~~DTTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~  547 (677)
T KOG0596|consen  471 LAVKTIHQHGIVHSDLKPANFLLVKG-RLKLI--DFGIANAIQPDTTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKI  547 (677)
T ss_pred             HHHHHHHHhceeecCCCcccEEEEee-eEEee--eechhcccCccccceeeccccCcccccCHHHHhhccccccCCCcce
Confidence            45688999999999999999877654 45666  9999832         245699999999998753211        1


Q ss_pred             CCcchhhHHHHHHHHHHHHhCCCCCCCCCchhh-hHHHHhhccccCCCCCCCHH-HHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581         70 RNLEACDMWSFAVLLWELATREVPFADLTPMEV-GMKVALEGLRITIPPGISSH-LSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus        70 ~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      ..++++|+||+||++|+|+.|++||......-. +..+..-+...++|...+.. +.++++.||+.||.+||++.++++
T Consensus       548 Ki~r~SDvWSLGCILYqMvYgktPf~~~~n~~aKl~aI~~P~~~Iefp~~~~~~~li~~mK~CL~rdPkkR~si~eLLq  626 (677)
T KOG0596|consen  548 KISRKSDVWSLGCILYQMVYGKTPFGQIINQIAKLHAITDPNHEIEFPDIPENDELIDVMKCCLARDPKKRWSIPELLQ  626 (677)
T ss_pred             eecCccchhhhhhHHHHHHhcCCchHHHHHHHHHHHhhcCCCccccccCCCCchHHHHHHHHHHhcCcccCCCcHHHhc
Confidence            356889999999999999999999976543222 22222222344555544443 999999999999999999999985

>KOG0660|consensus

Probab=99.94  E-value=2e-26  Score=154.10  Aligned_cols=136  Identities=18%  Similarity=0.126  Sum_probs=108.8

Q ss_pred             hHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc---------CCcccCCcccCccccccCCCCCCcchhhH
Q psy12581          7 VYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ---------RGRCYYPAWMSPEALQKKPGDRNLEACDM   77 (153)
Q Consensus         7 ~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~---------~~~~~~~~~~~pe~~~~~~~~~~~~~~dv   77 (153)
                      -.++|+|+.++.|+|+++.|++++.+-..|++  |||++...         +.-..|.+|.|||.+..  ...++...|+
T Consensus       136 rgLKyiHSAnViHRDLKPsNll~n~~c~lKI~--DFGLAR~~~~~~~~~~mTeYVaTRWYRAPElll~--~~~Yt~aiDi  211 (359)
T KOG0660|consen  136 RGLKYIHSANVIHRDLKPSNLLLNADCDLKIC--DFGLARYLDKFFEDGFMTEYVATRWYRAPELLLN--SSEYTKAIDI  211 (359)
T ss_pred             HhcchhhcccccccccchhheeeccCCCEEec--cccceeeccccCcccchhcceeeeeecCHHHHhc--cccccchhhh
Confidence            36789999999999999999999999888888  99999555         33467889999999865  3467789999


Q ss_pred             HHHHHHHHHHHhCCCCCCCCCchhhhHHHHhh------------------------ccccCCC-----CCCCHHHHHHHH
Q psy12581         78 WSFAVLLWELATREVPFADLTPMEVGMKVALE------------------------GLRITIP-----PGISSHLSKLIR  128 (153)
Q Consensus        78 ~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~------------------------~~~~~~~-----~~~~~~~~~l~~  128 (153)
                      ||.||++.|+++|++-|.+.+...++..++.-                        +..+..|     +..++.+.+++.
T Consensus       212 WSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l~~i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLle  291 (359)
T KOG0660|consen  212 WSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDLQKIRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLE  291 (359)
T ss_pred             hhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHHHHhccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHH
Confidence            99999999999999999886655544333210                        1111111     356789999999


Q ss_pred             HHhcCCCCCCCCHHHHHH
Q psy12581        129 ICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus       129 ~cl~~~p~~Rps~~~~l~  146 (153)
                      +||+.||.+|+|++++++
T Consensus       292 kmL~fdP~kRita~eAL~  309 (359)
T KOG0660|consen  292 KMLVFDPKKRITAEEALA  309 (359)
T ss_pred             HHhccCccccCCHHHHhc
Confidence            999999999999999875

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=99.94  E-value=4.3e-26  Score=158.94  Aligned_cols=137  Identities=19%  Similarity=0.131  Sum_probs=103.9

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc------CCcccCCcccCccccccCCCCCCcchhhHH
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ------RGRCYYPAWMSPEALQKKPGDRNLEACDMW   78 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~------~~~~~~~~~~~pe~~~~~~~~~~~~~~dv~   78 (153)
                      ..-++.|||++++.|+||++.||+++.++.+|+.  |||++...      ....+++.|++||.+.+.   .++.++|+|
T Consensus       132 i~~~L~~LH~~~ivHrDlkp~NIl~~~~~~~kl~--Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~---~~~~~~Diw  206 (359)
T cd07876         132 MLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKIL--DFGLARTACTNFMMTPYVVTRYYRAPEVILGM---GYKENVDIW  206 (359)
T ss_pred             HHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEe--cCCCccccccCccCCCCcccCCCCCchhccCC---CCCcchhhH
Confidence            3456789999999999999999999999998888  99988432      234678899999998764   345789999


Q ss_pred             HHHHHHHHHHhCCCCCCCCCchhhhHHHHh----------------------hcccc------------------CCCCC
Q psy12581         79 SFAVLLWELATREVPFADLTPMEVGMKVAL----------------------EGLRI------------------TIPPG  118 (153)
Q Consensus        79 s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~----------------------~~~~~------------------~~~~~  118 (153)
                      |+|+++|++++|+.||.+............                      .....                  .....
T Consensus       207 SlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  286 (359)
T cd07876         207 SVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMNRLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKL  286 (359)
T ss_pred             HHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHhhCCCCCCcchhhhccccccccccccccc
Confidence            999999999999999987654322211110                      00000                  00112


Q ss_pred             CCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581        119 ISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus       119 ~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      .+..+.+++.+||+.||++|||+.++++
T Consensus       287 ~~~~~~~li~~mL~~dP~~R~t~~e~l~  314 (359)
T cd07876         287 KTSQARDLLSKMLVIDPDKRISVDEALR  314 (359)
T ss_pred             cchhHHHHHHHHhccCcccCCCHHHHhc
Confidence            3567899999999999999999999986

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>KOG0033|consensus

Probab=99.94  E-value=3.7e-26  Score=146.74  Aligned_cols=134  Identities=21%  Similarity=0.272  Sum_probs=111.6

Q ss_pred             HHhhhhcCCCCCCCeeeeeeeec---cccchhhcccccccccccC------CcccCCcccCccccccCCCCCCcchhhHH
Q psy12581          8 YSFYLNSKKSKTSNAFLFCCQID---EDLTARINMADAQFSFQQR------GRCYYPAWMSPEALQKKPGDRNLEACDMW   78 (153)
Q Consensus         8 ~~~~lh~~~i~~~ni~~~~~~~~---~~~~~kl~~~d~g~~~~~~------~~~~~~~~~~pe~~~~~~~~~~~~~~dv~   78 (153)
                      ++.|+|.++|+|+++++.|.++.   .+-.+|+.  |||.+....      +..|||.||+||++...+++   ..+|+|
T Consensus       122 al~yCH~n~IvHRDvkP~nllLASK~~~A~vKL~--~FGvAi~l~~g~~~~G~~GtP~fmaPEvvrkdpy~---kpvDiW  196 (355)
T KOG0033|consen  122 ALAYCHSNGIVHRDLKPENLLLASKAKGAAVKLA--DFGLAIEVNDGEAWHGFAGTPGYLSPEVLKKDPYS---KPVDIW  196 (355)
T ss_pred             HHHHHHhcCceeccCChhheeeeeccCCCceeec--ccceEEEeCCccccccccCCCcccCHHHhhcCCCC---Ccchhh
Confidence            57899999999999999988774   23345666  999995543      45799999999999976554   789999


Q ss_pred             HHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCC--CCCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581         79 SFAVLLWELATREVPFADLTPMEVGMKVALEGLRITI--PPGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus        79 s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      +.|+++|-++.|.+||.+.+.......+....+..+.  ....+++.++++++||..||++|.|+.|+++
T Consensus       197 ~cGViLfiLL~G~~PF~~~~~~rlye~I~~g~yd~~~~~w~~is~~Ak~LvrrML~~dP~kRIta~EAL~  266 (355)
T KOG0033|consen  197 ACGVILYILLVGYPPFWDEDQHRLYEQIKAGAYDYPSPEWDTVTPEAKSLIRRMLTVNPKKRITADEALK  266 (355)
T ss_pred             hhhHHHHHHHhCCCCCCCccHHHHHHHHhccccCCCCcccCcCCHHHHHHHHHHhccChhhhccHHHHhC
Confidence            9999999999999999998888888887776664443  4568899999999999999999999999874

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=99.94  E-value=7.9e-26  Score=151.23  Aligned_cols=141  Identities=26%  Similarity=0.421  Sum_probs=112.4

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccccCC--------cccCCcccCccccccCCCCCCcchhh
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQRG--------RCYYPAWMSPEALQKKPGDRNLEACD   76 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~~--------~~~~~~~~~pe~~~~~~~~~~~~~~d   76 (153)
                      ..-+..|||++++.|+||.+.||+++.++.+++.  |||++.....        ...+..|++||.+.+.   ..+.++|
T Consensus       112 i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~--dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~D  186 (261)
T cd05068         112 VASGMAYLEAQNYIHRDLAARNVLVGENNICKVA--DFGLARVIKEDIYEAREGAKFPIKWTAPEAALYN---RFSIKSD  186 (261)
T ss_pred             HHHHHHHHHhCCeeeccCCcceEEEcCCCCEEEC--CcceEEEccCCcccccCCCcCceeccCccccccC---CCCchhh
Confidence            3456789999999999999999999999988888  9998743221        1123469999988753   3457899


Q ss_pred             HHHHHHHHHHHHh-CCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHhhh
Q psy12581         77 MWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKM  151 (153)
Q Consensus        77 v~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~~~  151 (153)
                      +||+|++++++++ |+.||.+.........+ ......+.+...+..+.+++.+||..+|++||++.++.+.|+.+
T Consensus       187 i~slG~~l~el~t~g~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~~  261 (261)
T cd05068         187 VWSFGILLTEIVTYGRMPYPGMTNAEVLQQV-DQGYRMPCPPGCPKELYDIMLDCWKEDPDDRPTFETLQWKLEDF  261 (261)
T ss_pred             HHHHHHHHHHHHhcCCCCCCCCCHHHHHHHH-HcCCCCCCCCcCCHHHHHHHHHHhhcCcccCCCHHHHHHHHhcC
Confidence            9999999999999 99999877655544433 33334455667789999999999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>PHA02882 putative serine/threonine kinase; Provisional

Probab=99.94  E-value=2.4e-26  Score=156.30  Aligned_cols=140  Identities=11%  Similarity=0.065  Sum_probs=107.0

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc--------------CCcccCCcccCccccccCCCCC
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ--------------RGRCYYPAWMSPEALQKKPGDR   70 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~--------------~~~~~~~~~~~pe~~~~~~~~~   70 (153)
                      ..-++.|||++++.|+||+++||+++.++.+++.  |||++...              ....||+.|++||...+.   .
T Consensus       135 i~~~l~~lH~~~iiHrDiKp~Nill~~~~~~~l~--DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~---~  209 (294)
T PHA02882        135 MLTTLEYIHEHGISHGDIKPENIMVDGNNRGYII--DYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGA---C  209 (294)
T ss_pred             HHHHHHHHHhCCeecCCCCHHHEEEcCCCcEEEE--EcCCceeeccCCcccccccccccccCCCccccCHHHhCCC---C
Confidence            3456789999999999999999999999888887  99997321              123588999999988764   3


Q ss_pred             CcchhhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHH----hhccc-c-CCCCCCCHHHHHHHHHHhcCCCCCCCCHHHH
Q psy12581         71 NLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVA----LEGLR-I-TIPPGISSHLSKLIRICMNEDPGKRPTFDMV  144 (153)
Q Consensus        71 ~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~----~~~~~-~-~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~  144 (153)
                      ++.++|+||+|++++++++|+.||.+...........    ..... . ......++.+.+++..|+..+|++||++.++
T Consensus       210 ~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rp~~~~l  289 (294)
T PHA02882        210 VTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLIHAAKCDFIKRLHEGKIKIKNANKFIYDFIECVTKLSYEEKPDYDAL  289 (294)
T ss_pred             CCcHHHHHHHHHHHHHHHhCCCCCCccccchHHHHHhHHHHHHHhhhhhhccCCCCHHHHHHHHHHHhCCCCCCCCHHHH
Confidence            5589999999999999999999998763322111100    01100 0 1133467889999999999999999999999


Q ss_pred             HHHHh
Q psy12581        145 LPILD  149 (153)
Q Consensus       145 l~~L~  149 (153)
                      .+.|+
T Consensus       290 ~~~~~  294 (294)
T PHA02882        290 IKIFD  294 (294)
T ss_pred             HHhhC
Confidence            98763

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=99.93  E-value=1.2e-26  Score=159.25  Aligned_cols=134  Identities=22%  Similarity=0.293  Sum_probs=108.4

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc-------CCcccCCcccCccccccCCCCCCcchhhH
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ-------RGRCYYPAWMSPEALQKKPGDRNLEACDM   77 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~-------~~~~~~~~~~~pe~~~~~~~~~~~~~~dv   77 (153)
                      ..-++.|||++++.|+||++.||+++.++.+++.  |||++...       ...+|++.|++||.+.+.   .++.++|+
T Consensus       105 i~~~l~~lH~~~ivHrDlkp~Nil~~~~~~~kl~--Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~Di  179 (316)
T cd05620         105 IVCGLQFLHSKGIIYRDLKLDNVMLDRDGHIKIA--DFGMCKENVFGDNRASTFCGTPDYIAPEILQGL---KYTFSVDW  179 (316)
T ss_pred             HHHHHHHHHHCCeEecCCCHHHeEECCCCCEEeC--ccCCCeecccCCCceeccCCCcCccCHHHHcCC---CCCcccch
Confidence            3456899999999999999999999999988888  99987421       234688999999998764   34578999


Q ss_pred             HHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHH-HHH
Q psy12581         78 WSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFD-MVL  145 (153)
Q Consensus        78 ~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~-~~l  145 (153)
                      ||+|+++|++++|..||.+.........+...  .+..|...+.++.+++.+||+.||++|+++. +++
T Consensus       180 wslGvil~el~~g~~Pf~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~~~~~  246 (316)
T cd05620         180 WSFGVLLYEMLIGQSPFHGDDEDELFESIRVD--TPHYPRWITKESKDILEKLFERDPTRRLGVVGNIR  246 (316)
T ss_pred             hhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhC--CCCCCCCCCHHHHHHHHHHccCCHHHcCCChHHHH
Confidence            99999999999999999877655544333222  3445667889999999999999999999974 554

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=99.93  E-value=7.9e-26  Score=155.03  Aligned_cols=143  Identities=27%  Similarity=0.426  Sum_probs=113.8

Q ss_pred             chhhHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccccC---------CcccCCcccCccccccCCCCCCcch
Q psy12581          4 KKIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQR---------GRCYYPAWMSPEALQKKPGDRNLEA   74 (153)
Q Consensus         4 ~~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~---------~~~~~~~~~~pe~~~~~~~~~~~~~   74 (153)
                      ..+-++.|||++++.|+||.+.||+++.++.+|+.  |||.+....         ...++..|++||.+.+.   .++.+
T Consensus       142 qi~~aL~~lH~~gi~H~dlkp~Nill~~~~~~kL~--Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~  216 (314)
T cd05099         142 QVARGMEYLESRRCIHRDLAARNVLVTEDNVMKIA--DFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDR---VYTHQ  216 (314)
T ss_pred             HHHHHHHHHHHCCeeeccccceeEEEcCCCcEEEc--cccccccccccccccccccCCCCccccCHHHHccC---CcCcc
Confidence            34567899999999999999999999999988888  999884321         11233579999988753   34578


Q ss_pred             hhHHHHHHHHHHHHh-CCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHhhhh
Q psy12581         75 CDMWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKMK  152 (153)
Q Consensus        75 ~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~~~~  152 (153)
                      +|+||+|+++|++++ |..||.+......... ...+.....+...+..+.+++.+||..+|++||++.++++.|+++.
T Consensus       217 ~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~  294 (314)
T cd05099         217 SDVWSFGILMWEIFTLGGSPYPGIPVEELFKL-LREGHRMDKPSNCTHELYMLMRECWHAVPTQRPTFKQLVEALDKVL  294 (314)
T ss_pred             chhhHHHHHHHHHHhCCCCCCCCCCHHHHHHH-HHcCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHH
Confidence            999999999999998 8889877655444433 3344444556677889999999999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=99.93  E-value=7.6e-26  Score=152.96  Aligned_cols=140  Identities=24%  Similarity=0.340  Sum_probs=112.3

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc---------CCcccCCcccCccccccCCCCCCcchh
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ---------RGRCYYPAWMSPEALQKKPGDRNLEAC   75 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~---------~~~~~~~~~~~pe~~~~~~~~~~~~~~   75 (153)
                      .+-++.|||++++.|+||.+.||+++.++.+|+.  |||++...         ....++..|++||.+.+.   ..+.++
T Consensus       133 i~~al~~lH~~~i~H~dlkp~nili~~~~~~kl~--dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~  207 (283)
T cd05090         133 IAAGMEYLSSHFFVHKDLAARNILIGEQLHVKIS--DLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYG---KFSSDS  207 (283)
T ss_pred             HHHHHHHHHhcCeehhccccceEEEcCCCcEEec--cccccccccCCcceecccCCCccceecChHHhccC---CCCchh
Confidence            3456799999999999999999999999988888  99988432         122345679999988653   345889


Q ss_pred             hHHHHHHHHHHHHh-CCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHhh
Q psy12581         76 DMWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDK  150 (153)
Q Consensus        76 dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~~  150 (153)
                      |+||+|++++++++ |..||.+........ .......++.+...+..+.+++.+||+.+|++||++.++.+.|..
T Consensus       208 Dv~slG~il~el~~~g~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~  282 (283)
T cd05090         208 DIWSFGVVLWEIFSFGLQPYYGFSNQEVIE-MVRKRQLLPCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLRS  282 (283)
T ss_pred             hhHHHHHHHHHHHcCCCCCCCCCCHHHHHH-HHHcCCcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence            99999999999998 999997766544433 333444455667788999999999999999999999999988764

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=99.93  E-value=5.9e-26  Score=151.77  Aligned_cols=141  Identities=26%  Similarity=0.434  Sum_probs=113.6

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccccC--------CcccCCcccCccccccCCCCCCcchhh
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQR--------GRCYYPAWMSPEALQKKPGDRNLEACD   76 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~--------~~~~~~~~~~pe~~~~~~~~~~~~~~d   76 (153)
                      ..-++.|||++++.|+||.+.||+++.++.+++.  |||.+....        ...++..|++||.+.+.   ..+.++|
T Consensus       111 i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~l~--dfg~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~---~~~~~~D  185 (260)
T cd05067         111 IAEGMAFIERKNYIHRDLRAANILVSETLCCKIA--DFGLARLIEDNEYTAREGAKFPIKWTAPEAINYG---TFTIKSD  185 (260)
T ss_pred             HHHHHHHHhcCCeecccccHHhEEEcCCCCEEEc--cCcceeecCCCCcccccCCcccccccCHHHhccC---CcCcccc
Confidence            4456799999999999999999999999988888  999874322        12345679999988653   3457899


Q ss_pred             HHHHHHHHHHHHh-CCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHhhh
Q psy12581         77 MWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKM  151 (153)
Q Consensus        77 v~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~~~  151 (153)
                      +||+|++++++++ |+.||.+......... .......+.+...+..+.+++.+||..+|++||+++++...|+.+
T Consensus       186 i~slG~~l~el~~~g~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~~  260 (260)
T cd05067         186 VWSFGILLTEIVTYGRIPYPGMTNPEVIQN-LERGYRMPRPDNCPEELYELMRLCWKEKPEERPTFEYLRSVLEDF  260 (260)
T ss_pred             hHHHHHHHHHHHhCCCCCCCCCChHHHHHH-HHcCCCCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHhhcC
Confidence            9999999999998 9999987665554333 334444556667888999999999999999999999999999764

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=99.93  E-value=9.7e-27  Score=160.14  Aligned_cols=131  Identities=22%  Similarity=0.353  Sum_probs=108.9

Q ss_pred             chhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc-------CCcccCCcccCccccccCCCCCCcchhh
Q psy12581          4 KKIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ-------RGRCYYPAWMSPEALQKKPGDRNLEACD   76 (153)
Q Consensus         4 ~~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~-------~~~~~~~~~~~pe~~~~~~~~~~~~~~d   76 (153)
                      ...-++.|||++++.|+||++.||+++.++.+|+.  |||++...       ....|++.|++||.+.+.   .++.++|
T Consensus       109 qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~kL~--DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~D  183 (323)
T cd05616         109 EIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIA--DFGMCKENMWDGVTTKTFCGTPDYIAPEIIAYQ---PYGKSVD  183 (323)
T ss_pred             HHHHHHHHHHHCCEEecCCCHHHeEECCCCcEEEc--cCCCceecCCCCCccccCCCChhhcCHHHhcCC---CCCCccc
Confidence            34567899999999999999999999999998888  99987432       234688999999998864   3458899


Q ss_pred             HHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCH
Q psy12581         77 MWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTF  141 (153)
Q Consensus        77 v~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~  141 (153)
                      +||+|+++|++++|+.||.+.........+...  ....|...+.++.+++.+||+.+|++|++.
T Consensus       184 iwSlGvil~elltg~~Pf~~~~~~~~~~~i~~~--~~~~p~~~s~~~~~li~~~l~~~p~~R~~~  246 (323)
T cd05616         184 WWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEH--NVAYPKSMSKEAVAICKGLMTKHPGKRLGC  246 (323)
T ss_pred             hhchhHHHHHHHhCCCCCCCCCHHHHHHHHHhC--CCCCCCcCCHHHHHHHHHHcccCHHhcCCC
Confidence            999999999999999999887766655555443  344567789999999999999999999974

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=99.93  E-value=4.5e-26  Score=153.16  Aligned_cols=140  Identities=19%  Similarity=0.237  Sum_probs=108.3

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc-------CCcccCCcccCccccccCC--CCCCcchh
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ-------RGRCYYPAWMSPEALQKKP--GDRNLEAC   75 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~-------~~~~~~~~~~~pe~~~~~~--~~~~~~~~   75 (153)
                      .+-+..|||++++.|+|+.+.||+++.++.+++.  |||++...       ....++..|++||.+....  ...++.++
T Consensus       120 i~~~l~~LH~~~ivh~dl~~~nili~~~~~~~l~--Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~  197 (272)
T cd06637         120 ILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLV--DFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKS  197 (272)
T ss_pred             HHHHHHHHHHCCCccCCCCHHHEEECCCCCEEEc--cCCCceecccccccCCcccccccccCHhHhccccCcCCCCCchh
Confidence            3456789999999999999999999999988888  99998432       1235778899999986321  22456789


Q ss_pred             hHHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581         76 DMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus        76 dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      |+||+|+++|++++|..||.....................+..++..+.+++.+||..+|++|||+.++++
T Consensus       198 Dv~slGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~  268 (272)
T cd06637         198 DLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPAPRLKSKKWSKKFQSFIESCLVKNHSQRPTTEQLMK  268 (272)
T ss_pred             hHHHHHHHHHHHHhCCCCccccCHHHHHHHHhcCCCCCCCCCCcCHHHHHHHHHHcCCChhhCCCHHHHhh
Confidence            99999999999999999997655444433333222222234457889999999999999999999999875

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=99.93  E-value=1.1e-25  Score=150.08  Aligned_cols=138  Identities=33%  Similarity=0.490  Sum_probs=113.4

Q ss_pred             hhHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccccC---------CcccCCcccCccccccCCCCCCcchhh
Q psy12581          6 IVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQR---------GRCYYPAWMSPEALQKKPGDRNLEACD   76 (153)
Q Consensus         6 ~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~---------~~~~~~~~~~pe~~~~~~~~~~~~~~d   76 (153)
                      .-++.|||++++.|+||.++||+++.++.+++.  |||.+....         ...++..|++||.+...   ..+.++|
T Consensus       115 ~~al~~lH~~~i~H~di~p~nili~~~~~~~l~--dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~D  189 (262)
T cd00192         115 AKGMEYLASKKFVHRDLAARNCLVGEDLVVKIS--DFGLSRDVYDDDYYRKKTGGKLPIRWMAPESLKDG---IFTSKSD  189 (262)
T ss_pred             HHHHHHHHcCCcccCccCcceEEECCCCcEEEc--ccccccccccccccccccCCCcCccccCHHHhccC---Ccchhhc
Confidence            456789999999999999999999999988888  999884332         23567789999988764   4558899


Q ss_pred             HHHHHHHHHHHHh-CCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHh
Q psy12581         77 MWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILD  149 (153)
Q Consensus        77 v~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~  149 (153)
                      +||+|++++++++ |..||...........+. .......+...+..+.+++.+||..+|++|||+.++++.|+
T Consensus       190 i~slG~il~~l~~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~  262 (262)
T cd00192         190 VWSFGVLLWEIFTLGATPYPGLSNEEVLEYLR-KGYRLPKPEYCPDELYELMLSCWQLDPEDRPTFSELVERLE  262 (262)
T ss_pred             cHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHH-cCCCCCCCccCChHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence            9999999999998 699998876555444433 34455667778999999999999999999999999998874

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=99.93  E-value=1.8e-26  Score=158.43  Aligned_cols=134  Identities=21%  Similarity=0.290  Sum_probs=108.5

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc-------CCcccCCcccCccccccCCCCCCcchhhH
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ-------RGRCYYPAWMSPEALQKKPGDRNLEACDM   77 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~-------~~~~~~~~~~~pe~~~~~~~~~~~~~~dv   77 (153)
                      ..-++.|||++++.|+||++.||+++.++.+|+.  |||++...       ....|++.|++||.+.+.   .++.++|+
T Consensus       105 i~~al~~LH~~~ivHrdikp~Nil~~~~~~~kl~--Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~Dv  179 (316)
T cd05619         105 IICGLQFLHSKGIVYRDLKLDNILLDTDGHIKIA--DFGMCKENMLGDAKTCTFCGTPDYIAPEILLGQ---KYNTSVDW  179 (316)
T ss_pred             HHHHHHHHHhCCeEeCCCCHHHEEECCCCCEEEc--cCCcceECCCCCCceeeecCCccccCHHHHcCC---CCCchhhh
Confidence            3456899999999999999999999999988888  99987431       223578999999998764   34588999


Q ss_pred             HHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHH-HHH
Q psy12581         78 WSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFD-MVL  145 (153)
Q Consensus        78 ~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~-~~l  145 (153)
                      ||+|+++|++++|..||.+.........+...  .+..|...+..+.+++.+||+.+|++|+++. ++.
T Consensus       180 wslG~il~el~~G~~pf~~~~~~~~~~~i~~~--~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~  246 (316)
T cd05619         180 WSFGVLLYEMLIGQSPFHGHDEEELFQSIRMD--NPCYPRWLTREAKDILVKLFVREPERRLGVKGDIR  246 (316)
T ss_pred             hhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhC--CCCCCccCCHHHHHHHHHHhccCHhhcCCChHHHH
Confidence            99999999999999999877655544443322  3345666889999999999999999999986 554

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=99.93  E-value=5.7e-26  Score=158.09  Aligned_cols=137  Identities=18%  Similarity=0.141  Sum_probs=104.1

Q ss_pred             hhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc------CCcccCCcccCccccccCCCCCCcchhhHHH
Q psy12581          6 IVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ------RGRCYYPAWMSPEALQKKPGDRNLEACDMWS   79 (153)
Q Consensus         6 ~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~------~~~~~~~~~~~pe~~~~~~~~~~~~~~dv~s   79 (153)
                      .-++.|||++++.|+||++.||+++.++.+|+.  |||++...      ....++..|++||.+.+.   .++.++|+||
T Consensus       129 ~~aL~~LH~~givHrDikp~Nill~~~~~~kl~--Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~---~~~~~~Diws  203 (355)
T cd07874         129 LCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKIL--DFGLARTAGTSFMMTPYVVTRYYRAPEVILGM---GYKENVDIWS  203 (355)
T ss_pred             HHHHHHHHhCCcccCCCChHHEEECCCCCEEEe--eCcccccCCCccccCCccccCCccCHHHHcCC---CCCchhhHHH
Confidence            446789999999999999999999999988888  99998443      223678899999998764   3457899999


Q ss_pred             HHHHHHHHHhCCCCCCCCCchhhhHHHHhh----------------------ccc---c---------------CCCCCC
Q psy12581         80 FAVLLWELATREVPFADLTPMEVGMKVALE----------------------GLR---I---------------TIPPGI  119 (153)
Q Consensus        80 ~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~----------------------~~~---~---------------~~~~~~  119 (153)
                      +|++++++++|+.||.+.............                      ...   .               ..+...
T Consensus       204 lG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (355)
T cd07874         204 VGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLK  283 (355)
T ss_pred             HHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhcHHHHHHHhcCCccccccchhhcccccccccccccccc
Confidence            999999999999999775543322211110                      000   0               001123


Q ss_pred             CHHHHHHHHHHhcCCCCCCCCHHHHHHH
Q psy12581        120 SSHLSKLIRICMNEDPGKRPTFDMVLPI  147 (153)
Q Consensus       120 ~~~~~~l~~~cl~~~p~~Rps~~~~l~~  147 (153)
                      +..+.+++.+||+.||++|||+.++++.
T Consensus       284 ~~~~~~li~~mL~~dP~~Rps~~ell~h  311 (355)
T cd07874         284 ASQARDLLSKMLVIDPAKRISVDEALQH  311 (355)
T ss_pred             chHHHHHHHHHhcCCchhcCCHHHHhcC
Confidence            4578999999999999999999999863

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=99.93  E-value=1.3e-26  Score=159.48  Aligned_cols=130  Identities=22%  Similarity=0.358  Sum_probs=107.4

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc-------CCcccCCcccCccccccCCCCCCcchhhH
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ-------RGRCYYPAWMSPEALQKKPGDRNLEACDM   77 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~-------~~~~~~~~~~~pe~~~~~~~~~~~~~~dv   77 (153)
                      ..-++.|||++++.|+||++.||+++.++.+|+.  |||++...       ...+|++.|++||.+.+..   ++.++|+
T Consensus       110 i~~al~~lH~~~ivH~dlkp~Nill~~~~~~kL~--Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~~Di  184 (324)
T cd05587         110 IAIGLFFLHSKGIIYRDLKLDNVMLDAEGHIKIA--DFGMCKENIFGGKTTRTFCGTPDYIAPEIIAYQP---YGKSVDW  184 (324)
T ss_pred             HHHHHHHHHHCCeEecCCCHHHeEEcCCCCEEEe--ecCcceecCCCCCceeeecCCccccChhhhcCCC---CCcccch
Confidence            3457899999999999999999999999988888  99987421       1236889999999988643   4578999


Q ss_pred             HHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCH
Q psy12581         78 WSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTF  141 (153)
Q Consensus        78 ~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~  141 (153)
                      ||+|+++|++++|+.||.+.........+...  ....|...+..+.+++.+||..+|++|++.
T Consensus       185 wslGvil~elltG~~pf~~~~~~~~~~~i~~~--~~~~~~~~~~~~~~li~~~l~~~P~~R~~~  246 (324)
T cd05587         185 WAFGVLLYEMLAGQPPFDGEDEDELFQSIMEH--NVSYPKSLSKEAVSICKGLLTKHPAKRLGC  246 (324)
T ss_pred             hhhHHHHHHHHhCCCCCCCCCHHHHHHHHHcC--CCCCCCCCCHHHHHHHHHHhhcCHHHcCCC
Confidence            99999999999999999887766555544432  345577789999999999999999999975

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=99.93  E-value=5.5e-26  Score=154.12  Aligned_cols=138  Identities=15%  Similarity=0.106  Sum_probs=105.2

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc-------CCcccCCcccCccccccCCCCCCcchhhH
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ-------RGRCYYPAWMSPEALQKKPGDRNLEACDM   77 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~-------~~~~~~~~~~~pe~~~~~~~~~~~~~~dv   77 (153)
                      ..-++.|||++++.|+||+++||+++.++.+|+.  |||++...       ....+++.|++||.+.+.  ..++.++|+
T Consensus       112 i~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~kl~--DfG~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~~Di  187 (288)
T cd07871         112 LLRGLSYCHKRKILHRDLKPQNLLINEKGELKLA--DFGLARAKSVPTKTYSNEVVTLWYRPPDVLLGS--TEYSTPIDM  187 (288)
T ss_pred             HHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEC--cCcceeeccCCCccccCceecccccChHHhcCC--cccCcHHHH
Confidence            3457899999999999999999999999988888  99987432       234568899999988642  234578999


Q ss_pred             HHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccc-------------------c---------CCCCCCCHHHHHHHHH
Q psy12581         78 WSFAVLLWELATREVPFADLTPMEVGMKVALEGLR-------------------I---------TIPPGISSHLSKLIRI  129 (153)
Q Consensus        78 ~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~-------------------~---------~~~~~~~~~~~~l~~~  129 (153)
                      ||+|+++|++++|+.||.+....+....+......                   .         ......+.+..+++.+
T Consensus       188 wslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~  267 (288)
T cd07871         188 WGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSNEEFRSYLFPQYRAQPLINHAPRLDTDGIDLLSS  267 (288)
T ss_pred             HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhccccchhhhccccCccCCCchHHhCCCCCHHHHHHHHH
Confidence            99999999999999999776544433222110000                   0         0012356789999999


Q ss_pred             HhcCCCCCCCCHHHHHH
Q psy12581        130 CMNEDPGKRPTFDMVLP  146 (153)
Q Consensus       130 cl~~~p~~Rps~~~~l~  146 (153)
                      ||+.||.+|||++++++
T Consensus       268 mL~~dp~~R~t~~~~l~  284 (288)
T cd07871         268 LLLYETKSRISAEAALR  284 (288)
T ss_pred             hcCcCcccCCCHHHHhc
Confidence            99999999999999875

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=99.93  E-value=4.9e-26  Score=158.93  Aligned_cols=136  Identities=18%  Similarity=0.105  Sum_probs=104.7

Q ss_pred             hhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc------CCcccCCcccCccccccCCCCCCcchhhHHH
Q psy12581          6 IVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ------RGRCYYPAWMSPEALQKKPGDRNLEACDMWS   79 (153)
Q Consensus         6 ~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~------~~~~~~~~~~~pe~~~~~~~~~~~~~~dv~s   79 (153)
                      .-++.|||++++.|+||++.||+++.++.+|+.  |||++...      ....++..|++||.+.+.   .++.++|+||
T Consensus       136 ~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~--DfG~a~~~~~~~~~~~~~~t~~y~aPE~~~~~---~~~~~~DiwS  210 (364)
T cd07875         136 LCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKIL--DFGLARTAGTSFMMTPYVVTRYYRAPEVILGM---GYKENVDIWS  210 (364)
T ss_pred             HHHHHHHhhCCeecCCCCHHHEEECCCCcEEEE--eCCCccccCCCCcccCCcccCCcCCHHHHhCC---CCCchhhHHh
Confidence            457889999999999999999999999998888  99998433      234678899999998764   3458899999


Q ss_pred             HHHHHHHHHhCCCCCCCCCchhhhHHHHhhcc--------------------cc--------------------CCCCCC
Q psy12581         80 FAVLLWELATREVPFADLTPMEVGMKVALEGL--------------------RI--------------------TIPPGI  119 (153)
Q Consensus        80 ~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~--------------------~~--------------------~~~~~~  119 (153)
                      +|+++|++++|+.||.+.........+.....                    .+                    ......
T Consensus       211 lG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  290 (364)
T cd07875         211 VGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLK  290 (364)
T ss_pred             HHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhhHHHHHHHhhCCCcCCCChHhhCccccccccccccccc
Confidence            99999999999999987654443332221000                    00                    001112


Q ss_pred             CHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581        120 SSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus       120 ~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      +..+.+++.+||+.||++|||+.++++
T Consensus       291 ~~~~~dll~~mL~~dP~~R~t~~e~L~  317 (364)
T cd07875         291 ASQARDLLSKMLVIDASKRISVDEALQ  317 (364)
T ss_pred             cHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence            457899999999999999999999986

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>KOG4257|consensus

Probab=99.93  E-value=1.8e-26  Score=164.26  Aligned_cols=140  Identities=25%  Similarity=0.396  Sum_probs=119.7

Q ss_pred             hHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccccC--------CcccCCcccCccccccCCCCCCcchhhHH
Q psy12581          7 VYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQR--------GRCYYPAWMSPEALQKKPGDRNLEACDMW   78 (153)
Q Consensus         7 ~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~--------~~~~~~~~~~pe~~~~~~~~~~~~~~dv~   78 (153)
                      -++.|||+..+.|+||..+||++....-+|+.  |||++....        ...-+..||+||-+..   ..++.++|||
T Consensus       502 talaYLeSkrfVHRDIAaRNiLVsSp~CVKLa--DFGLSR~~ed~~yYkaS~~kLPIKWmaPESINf---RrFTtASDVW  576 (974)
T KOG4257|consen  502 TALAYLESKRFVHRDIAARNILVSSPQCVKLA--DFGLSRYLEDDAYYKASRGKLPIKWMAPESINF---RRFTTASDVW  576 (974)
T ss_pred             HHHHHHHhhchhhhhhhhhheeecCcceeeec--ccchhhhccccchhhccccccceeecCccccch---hcccchhhHH
Confidence            46789999999999999999999999988988  999984432        2233458999999875   3667899999


Q ss_pred             HHHHHHHHHHh-CCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHhhhh
Q psy12581         79 SFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKMK  152 (153)
Q Consensus        79 s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~~~~  152 (153)
                      .||+++||++. |..||.+....+.... +.++-+++.|+.+++.+..++.+||..+|.+||++.++...|+.+.
T Consensus       577 MFgVCmWEIl~lGvkPfqgvkNsDVI~~-iEnGeRlP~P~nCPp~LYslmskcWayeP~kRPrftei~~~lsdv~  650 (974)
T KOG4257|consen  577 MFGVCMWEILSLGVKPFQGVKNSDVIGH-IENGERLPCPPNCPPALYSLMSKCWAYEPSKRPRFTEIKAILSDVL  650 (974)
T ss_pred             HHHHHHHHHHHhcCCccccccccceEEE-ecCCCCCCCCCCCChHHHHHHHHHhccCcccCCcHHHHHHHHHHHH
Confidence            99999999987 9999999877766543 4567789999999999999999999999999999999999888763

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=99.93  E-value=1.1e-25  Score=151.04  Aligned_cols=141  Identities=24%  Similarity=0.448  Sum_probs=112.1

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccccCC----------cccCCcccCccccccCCCCCCcch
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQRG----------RCYYPAWMSPEALQKKPGDRNLEA   74 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~~----------~~~~~~~~~pe~~~~~~~~~~~~~   74 (153)
                      ..-+..|||.+++.|+||.+.||+++.++.+++.  |||++.....          ...+..|++||.+...   .++.+
T Consensus       116 l~~al~~lH~~~i~H~dlkp~Nili~~~~~~kl~--dfg~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~---~~~~~  190 (268)
T cd05063         116 IAAGMKYLSDMNYVHRDLAARNILVNSNLECKVS--DFGLSRVLEDDPEGTYTTSGGKIPIRWTAPEAIAYR---KFTSA  190 (268)
T ss_pred             HHHHHHHHHHCCeeccccchhhEEEcCCCcEEEC--CCccceecccccccceeccCCCcCceecCHHHhhcC---CcChH
Confidence            4456799999999999999999999999888888  9998743311          1123469999988753   34588


Q ss_pred             hhHHHHHHHHHHHHh-CCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHhhh
Q psy12581         75 CDMWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKM  151 (153)
Q Consensus        75 ~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~~~  151 (153)
                      +|+||+|+++|++++ |..||...........+. .....+.+...+..+.+++.+||+.+|+.||++.++++.|.++
T Consensus       191 ~Dv~slG~il~ell~~g~~p~~~~~~~~~~~~i~-~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~~  267 (268)
T cd05063         191 SDVWSFGIVMWEVMSFGERPYWDMSNHEVMKAIN-DGFRLPAPMDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDKL  267 (268)
T ss_pred             hHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHh-cCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence            999999999999987 999997766555444333 3334445556788999999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=99.93  E-value=5.5e-26  Score=155.09  Aligned_cols=138  Identities=12%  Similarity=0.110  Sum_probs=102.5

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc-------CCcccCCcccCccccccCCCCCCcchhhH
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ-------RGRCYYPAWMSPEALQKKPGDRNLEACDM   77 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~-------~~~~~~~~~~~pe~~~~~~~~~~~~~~dv   77 (153)
                      ..-++.|||++++.|+||++.||+++.++.+|+.  |||++...       ....+++.|+|||.+.+..  .++.++|+
T Consensus       112 i~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl~--Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~--~~~~~~Di  187 (303)
T cd07869         112 LLRGLSYIHQRYILHRDLKPQNLLISDTGELKLA--DFGLARAKSVPSHTYSNEVVTLWYRPPDVLLGST--EYSTCLDM  187 (303)
T ss_pred             HHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEC--CCCcceeccCCCccCCCCcccCCCCChHHHcCCC--CCCcHHHH
Confidence            3457899999999999999999999999988888  99987432       2345788999999886432  34578999


Q ss_pred             HHHHHHHHHHHhCCCCCCCCCchhhh-HHHHhhcccc---------------------CCC---------CCCCHHHHHH
Q psy12581         78 WSFAVLLWELATREVPFADLTPMEVG-MKVALEGLRI---------------------TIP---------PGISSHLSKL  126 (153)
Q Consensus        78 ~s~g~~~~~~~~g~~p~~~~~~~~~~-~~~~~~~~~~---------------------~~~---------~~~~~~~~~l  126 (153)
                      ||+|++++++++|..||.+....... ..+......+                     ..+         ...+..+.++
T Consensus       188 wslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl  267 (303)
T cd07869         188 WGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHSLPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDL  267 (303)
T ss_pred             HHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccchhhccccccccccccCCccHHHHhhccCCChHHHHH
Confidence            99999999999999999875433221 1111000000                     000         0134678899


Q ss_pred             HHHHhcCCCCCCCCHHHHHH
Q psy12581        127 IRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus       127 ~~~cl~~~p~~Rps~~~~l~  146 (153)
                      +.+||+.||++|||++++++
T Consensus       268 i~~mL~~dp~~R~s~~~~l~  287 (303)
T cd07869         268 ASKLLQCFPKNRLSAQAALS  287 (303)
T ss_pred             HHHHhccCchhccCHHHHhc
Confidence            99999999999999999985

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=99.93  E-value=3.2e-26  Score=158.20  Aligned_cols=139  Identities=16%  Similarity=0.125  Sum_probs=103.8

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc----------CCcccCCcccCccccccCCCCCCcch
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ----------RGRCYYPAWMSPEALQKKPGDRNLEA   74 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~----------~~~~~~~~~~~pe~~~~~~~~~~~~~   74 (153)
                      ..-++.|||++++.|+||+++||+++.++.+|+.  |||++...          ....+++.|++||.+.+.. ..++.+
T Consensus       112 i~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kL~--Dfg~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~-~~~~~~  188 (338)
T cd07859         112 LLRALKYIHTANVFHRDLKPKNILANADCKLKIC--DFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFF-SKYTPA  188 (338)
T ss_pred             HHHHHHHHHHCCeecCCCCHHHeEECCCCcEEEc--cCccccccccccCccccccCCCCCCCcCCHHHHhccc-cccCch
Confidence            3457899999999999999999999999998888  99987432          1236788999999976421 245678


Q ss_pred             hhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHHh----------------------hccccCC-------CCCCCHHHHH
Q psy12581         75 CDMWSFAVLLWELATREVPFADLTPMEVGMKVAL----------------------EGLRITI-------PPGISSHLSK  125 (153)
Q Consensus        75 ~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~----------------------~~~~~~~-------~~~~~~~~~~  125 (153)
                      +|+||+|+++|++++|+.||.+.........+..                      .......       ....++.+.+
T Consensus       189 ~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  268 (338)
T cd07859         189 IDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETISRVRNEKARRYLSSMRKKQPVPFSQKFPNADPLALR  268 (338)
T ss_pred             hHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhhcccCCCchHHhcCCCChHHHH
Confidence            9999999999999999999976543222111000                      0000000       1235678899


Q ss_pred             HHHHHhcCCCCCCCCHHHHHH
Q psy12581        126 LIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus       126 l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      ++.+||+.+|++|||++++++
T Consensus       269 li~~~l~~~P~~Rpt~~e~l~  289 (338)
T cd07859         269 LLERLLAFDPKDRPTAEEALA  289 (338)
T ss_pred             HHHHHcCcCcccCCCHHHHhc
Confidence            999999999999999999984

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=99.93  E-value=1.6e-26  Score=160.07  Aligned_cols=134  Identities=20%  Similarity=0.258  Sum_probs=110.7

Q ss_pred             hhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc----CCcccCCcccCccccccCCCCCCcchhhHHHHH
Q psy12581          6 IVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ----RGRCYYPAWMSPEALQKKPGDRNLEACDMWSFA   81 (153)
Q Consensus         6 ~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~----~~~~~~~~~~~pe~~~~~~~~~~~~~~dv~s~g   81 (153)
                      .-++.|||++++.|+||++.||+++.++.+|+.  |||++...    ....|++.|+|||.+.+.   ..+.++|+||+|
T Consensus       141 ~~aL~~LH~~~ivHrDLkp~NILl~~~~~ikL~--DFG~a~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwSlG  215 (340)
T PTZ00426        141 VLIFEYLQSLNIVYRDLKPENLLLDKDGFIKMT--DFGFAKVVDTRTYTLCGTPEYIAPEILLNV---GHGKAADWWTLG  215 (340)
T ss_pred             HHHHHHHHHCCeEccCCCHHHEEECCCCCEEEe--cCCCCeecCCCcceecCChhhcCHHHHhCC---CCCccccccchh
Confidence            456789999999999999999999999999888  99998433    234688999999998764   345789999999


Q ss_pred             HHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCC-----CHHHHHH
Q psy12581         82 VLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRP-----TFDMVLP  146 (153)
Q Consensus        82 ~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----s~~~~l~  146 (153)
                      +++|++++|..||.+.........+...  ....|...+..+.+++++||+.+|++|+     +++++++
T Consensus       216 vil~ell~G~~Pf~~~~~~~~~~~i~~~--~~~~p~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~  283 (340)
T PTZ00426        216 IFIYEILVGCPPFYANEPLLIYQKILEG--IIYFPKFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKE  283 (340)
T ss_pred             hHHHHHhcCCCCCCCCCHHHHHHHHhcC--CCCCCCCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHc
Confidence            9999999999999887665555554433  2345677899999999999999999995     7888765

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=99.93  E-value=1.5e-25  Score=152.95  Aligned_cols=142  Identities=20%  Similarity=0.349  Sum_probs=112.3

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccccC---------CcccCCcccCccccccCCCCCCcchh
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQR---------GRCYYPAWMSPEALQKKPGDRNLEAC   75 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~---------~~~~~~~~~~pe~~~~~~~~~~~~~~   75 (153)
                      ..-++.|||++++.|+||.+.||+++.++.+|+.  |||.+....         ...++..|++||.+.+.   ..+.++
T Consensus       118 i~~~L~~LH~~~ivH~dikp~Nill~~~~~~kL~--Dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~---~~~~~~  192 (303)
T cd05110         118 IAKGMMYLEERRLVHRDLAARNVLVKSPNHVKIT--DFGLARLLEGDEKEYNADGGKMPIKWMALECIHYR---KFTHQS  192 (303)
T ss_pred             HHHHHHHHhhcCeeccccccceeeecCCCceEEc--cccccccccCcccccccCCCccccccCCHHHhccC---CCChHH
Confidence            4456789999999999999999999999888888  999884321         12345689999988753   355889


Q ss_pred             hHHHHHHHHHHHHh-CCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHhhhh
Q psy12581         76 DMWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKMK  152 (153)
Q Consensus        76 dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~~~~  152 (153)
                      |+||+|+++|++++ |..||.+...... ......+...+.+...+..+.+++.+||..+|++||++.++++.|.++.
T Consensus       193 DiwslG~~l~el~t~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~~  269 (303)
T cd05110         193 DVWSYGVTIWELMTFGGKPYDGIPTREI-PDLLEKGERLPQPPICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRMA  269 (303)
T ss_pred             HHHHHHHHHHHHHhCCCCCCCCCCHHHH-HHHHHCCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence            99999999999987 8899876543332 3334444445555667889999999999999999999999999988764

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=99.93  E-value=1e-25  Score=151.02  Aligned_cols=142  Identities=21%  Similarity=0.247  Sum_probs=109.5

Q ss_pred             hhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc-------CCcccCCcccCccccccCCCCCCcchhhHH
Q psy12581          6 IVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ-------RGRCYYPAWMSPEALQKKPGDRNLEACDMW   78 (153)
Q Consensus         6 ~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~-------~~~~~~~~~~~pe~~~~~~~~~~~~~~dv~   78 (153)
                      .-++.|||++++.|+||.+.||+++.++.+++.  |||++...       ....++..|++||.+.+.   ..+.++|+|
T Consensus       116 ~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~--dfg~~~~~~~~~~~~~~~~~~~~~~ape~~~~~---~~~~~~Dv~  190 (267)
T cd08229         116 CSALEHMHSRRVMHRDIKPANVFITATGVVKLG--DLGLGRFFSSKTTAAHSLVGTPYYMSPERIHEN---GYNFKSDIW  190 (267)
T ss_pred             HHHHHHHHHCCeecCCCCHHHEEEcCCCCEEEC--cchhhhccccCCcccccccCCcCccCHHHhcCC---CccchhhHH
Confidence            346789999999999999999999999988888  99987332       123677889999998653   345789999


Q ss_pred             HHHHHHHHHHhCCCCCCCCCchh-hhHHHHhhccccC-CCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHhhhh
Q psy12581         79 SFAVLLWELATREVPFADLTPME-VGMKVALEGLRIT-IPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKMK  152 (153)
Q Consensus        79 s~g~~~~~~~~g~~p~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~~~~  152 (153)
                      |+|++++++++|..||.+..... ............+ .+...+..+.+++.+||..+|++|||+.++++.++++.
T Consensus       191 slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~~  266 (267)
T cd08229         191 SLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEELRQLVNMCINPDPEKRPDITYVYDVAKRMH  266 (267)
T ss_pred             HHHHHHHHHHhCCCCcccccchHHHHhhhhhcCCCCCCCcccccHHHHHHHHHhcCCCcccCCCHHHHHHHHhhhc
Confidence            99999999999999986543321 1112222221222 23457789999999999999999999999999998874

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=99.93  E-value=9.8e-26  Score=150.52  Aligned_cols=139  Identities=26%  Similarity=0.451  Sum_probs=110.4

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccccC--------CcccCCcccCccccccCCCCCCcchhh
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQR--------GRCYYPAWMSPEALQKKPGDRNLEACD   76 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~--------~~~~~~~~~~pe~~~~~~~~~~~~~~d   76 (153)
                      ..-++.|||++++.|++|.+.||+++.++.+|+.  |||.+....        ...++..|++||...+.   .++.++|
T Consensus       109 i~~~l~~lH~~~i~H~dl~p~nili~~~~~~kl~--d~g~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~---~~~~~~D  183 (256)
T cd05113         109 VCEGMAYLESKQFIHRDLAARNCLVDDQGCVKVS--DFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLLYS---KFSSKSD  183 (256)
T ss_pred             HHHHHHHHHhCCeeccccCcceEEEcCCCCEEEC--CCccceecCCCceeecCCCccChhhCCHHHHhcC---cccchhH
Confidence            4457799999999999999999999999988888  999874221        12234579999998753   3457899


Q ss_pred             HHHHHHHHHHHHh-CCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHh
Q psy12581         77 MWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILD  149 (153)
Q Consensus        77 v~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~  149 (153)
                      +||+|+++|++++ |..||...........+. .......+...+..+.+++.+||+.+|++||++.++++.|+
T Consensus       184 i~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~~~  256 (256)
T cd05113         184 VWAFGVLMWEVYSLGKMPYERFNNSETVEKVS-QGLRLYRPHLASEKVYAIMYSCWHEKAEERPTFQQLLSSIE  256 (256)
T ss_pred             HHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHh-cCCCCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHhhC
Confidence            9999999999998 999998766555444443 33344445667899999999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=99.93  E-value=6e-26  Score=153.71  Aligned_cols=136  Identities=19%  Similarity=0.171  Sum_probs=103.9

Q ss_pred             hhHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccccC--------CcccCCcccCccccccCCCCCCcchhhH
Q psy12581          6 IVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQR--------GRCYYPAWMSPEALQKKPGDRNLEACDM   77 (153)
Q Consensus         6 ~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~--------~~~~~~~~~~pe~~~~~~~~~~~~~~dv   77 (153)
                      .-++.|||++++.|+||.+.||+++.++.+|+.  |||++....        ...+++.|++||.+.+.   .++.++|+
T Consensus       110 ~~~L~~lH~~~i~H~dlkp~Nill~~~~~~kl~--Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di  184 (287)
T cd07848         110 IKAIHWCHKNDIVHRDIKPENLLISHNDVLKLC--DFGFARNLSEGSNANYTEYVATRWYRSPELLLGA---PYGKAVDM  184 (287)
T ss_pred             HHHHHHHHHCCeecCCCCHHHEEEcCCCcEEEe--eccCcccccccccccccccccccccCCcHHHcCC---CCCCchhH
Confidence            456899999999999999999999999988888  999884321        23578899999998764   34578999


Q ss_pred             HHHHHHHHHHHhCCCCCCCCCchhhhHHHHhh-------------------ccccC-----------CCCCCCHHHHHHH
Q psy12581         78 WSFAVLLWELATREVPFADLTPMEVGMKVALE-------------------GLRIT-----------IPPGISSHLSKLI  127 (153)
Q Consensus        78 ~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~-------------------~~~~~-----------~~~~~~~~~~~l~  127 (153)
                      ||+|+++|++++|+.||.+.........+...                   ....+           .....+..+.+++
T Consensus       185 wslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll  264 (287)
T cd07848         185 WSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPRFHGLRFPAVNHPQSLERRYLGILSGVLLDLM  264 (287)
T ss_pred             HhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccchhcccccCcccCcccHHHhhhcccCHHHHHHH
Confidence            99999999999999999875543322211110                   00000           0112567899999


Q ss_pred             HHHhcCCCCCCCCHHHHHH
Q psy12581        128 RICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus       128 ~~cl~~~p~~Rps~~~~l~  146 (153)
                      ++||+.||++|||++++++
T Consensus       265 ~~~L~~~P~~R~s~~~~l~  283 (287)
T cd07848         265 KNLLKLNPTDRYLTEQCLN  283 (287)
T ss_pred             HHHccCCcccCCCHHHHhc
Confidence            9999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=99.93  E-value=3e-26  Score=158.31  Aligned_cols=137  Identities=19%  Similarity=0.158  Sum_probs=109.2

Q ss_pred             hhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc----CCcccCCcccCccccccCCCCCCcchhhHHHHH
Q psy12581          6 IVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ----RGRCYYPAWMSPEALQKKPGDRNLEACDMWSFA   81 (153)
Q Consensus         6 ~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~----~~~~~~~~~~~pe~~~~~~~~~~~~~~dv~s~g   81 (153)
                      .-++.|||++++.|+||.+.||+++.++.+|+.  |||++...    ....|++.|++||.+.+.   .++.++|+||+|
T Consensus       111 ~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kL~--Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DvwslG  185 (333)
T cd05600         111 FEAVDALHELGYIHRDLKPENFLIDASGHIKLT--DFGLSKGIVTYANSVVGSPDYMAPEVLRGK---GYDFTVDYWSLG  185 (333)
T ss_pred             HHHHHHHHHCCccccCCCHHHEEECCCCCEEEE--eCcCCcccccccCCcccCccccChhHhcCC---CCCCccceecch
Confidence            456789999999999999999999999998888  99988533    335788999999998764   445889999999


Q ss_pred             HHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCC------CCCCHHHHHHHHHHhcCCCCCCCCHHHHHHH
Q psy12581         82 VLLWELATREVPFADLTPMEVGMKVALEGLRITIP------PGISSHLSKLIRICMNEDPGKRPTFDMVLPI  147 (153)
Q Consensus        82 ~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~  147 (153)
                      +++|++++|..||...........+.........|      ...+.++.+++.+||..+|++||+++++++.
T Consensus       186 ~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h  257 (333)
T cd05600         186 CMLYEFLCGFPPFSGSTPNETWENLKYWKETLQRPVYDDPRFNLSDEAWDLITKLINDPSRRFGSLEDIKNH  257 (333)
T ss_pred             HHHhhhhhCCCCCCCCCHHHHHHHHHhccccccCCCCCccccccCHHHHHHHHHHhhChhhhcCCHHHHHhC
Confidence            99999999999998776555444333221111112      1458899999999999999999999999853

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=99.93  E-value=1.1e-25  Score=153.87  Aligned_cols=141  Identities=30%  Similarity=0.450  Sum_probs=112.9

Q ss_pred             hhHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccccC---------CcccCCcccCccccccCCCCCCcchhh
Q psy12581          6 IVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQR---------GRCYYPAWMSPEALQKKPGDRNLEACD   76 (153)
Q Consensus         6 ~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~---------~~~~~~~~~~pe~~~~~~~~~~~~~~d   76 (153)
                      +-++.|||++++.|+||.++||+++.++.+++.  |||.+....         ...++..|++||.+.+.   ..+.++|
T Consensus       150 ~~aL~~lH~~gi~H~dlkp~Nill~~~~~~kL~--dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~D  224 (307)
T cd05098         150 ARGMEYLASKKCIHRDLAARNVLVTEDNVMKIA--DFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDR---IYTHQSD  224 (307)
T ss_pred             HHHHHHHHHCCcccccccHHheEEcCCCcEEEC--CCcccccccccchhhccccCCCccceeChHHhccC---CCCcHHH
Confidence            457899999999999999999999999988888  999874321         11234579999988753   3458899


Q ss_pred             HHHHHHHHHHHHh-CCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHhhhh
Q psy12581         77 MWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKMK  152 (153)
Q Consensus        77 v~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~~~~  152 (153)
                      +||+|+++|++++ |..||.+....... ...........+...+..+.+++.+||..+|++||++.++++.|+++.
T Consensus       225 vwslG~~l~el~~~g~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~~  300 (307)
T cd05098         225 VWSFGVLLWEIFTLGGSPYPGVPVEELF-KLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL  300 (307)
T ss_pred             HHHHHHHHHHHHcCCCCCCCcCCHHHHH-HHHHcCCCCCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHH
Confidence            9999999999998 88888765544333 333344455567778899999999999999999999999999998864

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=99.93  E-value=6.4e-26  Score=157.79  Aligned_cols=141  Identities=20%  Similarity=0.195  Sum_probs=107.1

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc-------CCcccCCcccCccccccCCC--CCCcchh
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ-------RGRCYYPAWMSPEALQKKPG--DRNLEAC   75 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~-------~~~~~~~~~~~pe~~~~~~~--~~~~~~~   75 (153)
                      ..-++.|||++++.|+||++.||+++.++.+||.  |||++...       ....|+..|++||.+.....  ...+.++
T Consensus       177 i~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kL~--DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~  254 (353)
T PLN00034        177 ILSGIAYLHRRHIVHRDIKPSNLLINSAKNVKIA--DFGVSRILAQTMDPCNSSVGTIAYMSPERINTDLNHGAYDGYAG  254 (353)
T ss_pred             HHHHHHHHHHCCEeecCCCHHHEEEcCCCCEEEc--ccccceecccccccccccccCccccCccccccccccCcCCCcch
Confidence            3457899999999999999999999999988888  99987432       23468899999998753211  1223579


Q ss_pred             hHHHHHHHHHHHHhCCCCCCCCCchhhh--HHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHH
Q psy12581         76 DMWSFAVLLWELATREVPFADLTPMEVG--MKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPI  147 (153)
Q Consensus        76 dv~s~g~~~~~~~~g~~p~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~  147 (153)
                      |+||||+++|++++|+.||.........  ............+...+..+.+++.+||..+|++||++.++++.
T Consensus       255 DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~h  328 (353)
T PLN00034        255 DIWSLGVSILEFYLGRFPFGVGRQGDWASLMCAICMSQPPEAPATASREFRHFISCCLQREPAKRWSAMQLLQH  328 (353)
T ss_pred             hHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHhccCCCCCCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            9999999999999999999743322211  11111222344556788999999999999999999999999863

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=99.93  E-value=2e-25  Score=148.92  Aligned_cols=141  Identities=28%  Similarity=0.464  Sum_probs=112.5

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccccC----CcccCCcccCccccccCCCCCCcchhhHHHH
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQR----GRCYYPAWMSPEALQKKPGDRNLEACDMWSF   80 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~----~~~~~~~~~~pe~~~~~~~~~~~~~~dv~s~   80 (153)
                      ..-++.|||++++.|+||.+.||+++.++.+++.  |||.+....    ....+..|++||.+...   ..+.++|+||+
T Consensus       111 i~~~l~~lh~~~i~H~di~p~Nili~~~~~~~l~--d~g~~~~~~~~~~~~~~~~~~~ape~~~~~---~~~~~~Di~sl  185 (256)
T cd05039         111 VCEGMEYLEEKNFVHRDLAARNVLVSEDLVAKVS--DFGLAKEASQGQDSGKLPVKWTAPEALREK---KFSTKSDVWSF  185 (256)
T ss_pred             HHHHHHHHHhCCccchhcccceEEEeCCCCEEEc--ccccccccccccccCCCcccccCchhhcCC---cCCcHHHHHHH
Confidence            3456789999999999999999999999988888  999874432    12334579999988653   34578999999


Q ss_pred             HHHHHHHHh-CCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHhhh
Q psy12581         81 AVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKM  151 (153)
Q Consensus        81 g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~~~  151 (153)
                      |++++++++ |..||.......... ..........+...+..+.+++.+||..+|++||+++++++.|+.+
T Consensus       186 G~il~~l~~~g~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~~  256 (256)
T cd05039         186 GILLWEIYSFGRVPYPRIPLKDVVP-HVEKGYRMEAPEGCPPEVYKVMKDCWELDPAKRPTFKQLREQLALI  256 (256)
T ss_pred             HHHHHHHHhcCCCCCCCCCHHHHHH-HHhcCCCCCCccCCCHHHHHHHHHHhccChhhCcCHHHHHHHHhcC
Confidence            999999997 999987765444433 3333444555667889999999999999999999999999999764

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=99.93  E-value=2.1e-26  Score=161.03  Aligned_cols=140  Identities=19%  Similarity=0.226  Sum_probs=113.0

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc--------CCcccCCcccCccccccCC-CCCCcchh
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ--------RGRCYYPAWMSPEALQKKP-GDRNLEAC   75 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~--------~~~~~~~~~~~pe~~~~~~-~~~~~~~~   75 (153)
                      .+.++.|||++++.|+||++.||+++.++.+||.  |||++...        ....|++.|+|||.+.+.. ...++.++
T Consensus       151 i~~aL~~LH~~~ivHrDLkp~NILl~~~~~~kL~--DfG~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~  228 (370)
T cd05596         151 VVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLA--DFGTCMKMDANGMVRCDTAVGTPDYISPEVLKSQGGDGYYGREC  228 (370)
T ss_pred             HHHHHHHHHHCCeeccCCCHHHEEEcCCCCEEEE--eccceeeccCCCcccCCCCCCCcCeECHHHhccCCCCCCCCCce
Confidence            4567899999999999999999999999999998  99987432        2346899999999987543 22356889


Q ss_pred             hHHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCCC--CCCHHHHHHHHHHhcCCCCC--CCCHHHHHH
Q psy12581         76 DMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPP--GISSHLSKLIRICMNEDPGK--RPTFDMVLP  146 (153)
Q Consensus        76 dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~cl~~~p~~--Rps~~~~l~  146 (153)
                      |+||+|+++|++++|..||.+.........+.........|.  ..+..+.+++.+||..+|++  |++++++++
T Consensus       229 DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~  303 (370)
T cd05596         229 DWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMDHKNSLTFPDDIEISKQAKDLICAFLTDREVRLGRNGVDEIKS  303 (370)
T ss_pred             eeeehhHHHHHHHhCCCCcCCCCHHHHHHHHHcCCCcCCCCCcCCCCHHHHHHHHHHccChhhccCCCCHHHHhc
Confidence            999999999999999999988776665555554333333343  47899999999999999987  999999875

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=99.93  E-value=2.1e-25  Score=148.40  Aligned_cols=139  Identities=29%  Similarity=0.484  Sum_probs=109.0

Q ss_pred             hhHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccccCCc---------ccCCcccCccccccCCCCCCcchhh
Q psy12581          6 IVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQRGR---------CYYPAWMSPEALQKKPGDRNLEACD   76 (153)
Q Consensus         6 ~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~~~---------~~~~~~~~pe~~~~~~~~~~~~~~d   76 (153)
                      .-++.|||++++.|+||.+.||+++.++.+++.  |||.+......         ..+..|++||.+.+.   ..+.++|
T Consensus       104 ~~~L~~lH~~~i~H~dl~p~nil~~~~~~~kl~--dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~D  178 (252)
T cd05084         104 AAGMEYLESKHCIHRDLAARNCLVTEKNVLKIS--DFGMSREEEDGVYASTGGMKQIPVKWTAPEALNYG---RYSSESD  178 (252)
T ss_pred             HHHHHHHHhCCccccccchheEEEcCCCcEEEC--ccccCcccccccccccCCCCCCceeecCchhhcCC---CCChHHH
Confidence            345789999999999999999999999988888  99987432211         123469999998653   3457899


Q ss_pred             HHHHHHHHHHHHh-CCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHhh
Q psy12581         77 MWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDK  150 (153)
Q Consensus        77 v~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~~  150 (153)
                      +||+|+++|++++ |..||.......... ..........+...+..+.+++.+||+.+|++|||+.++++.|+.
T Consensus       179 v~slG~il~e~~~~~~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~  252 (252)
T cd05084         179 VWSFGILLWEAFSLGAVPYANLSNQQTRE-AIEQGVRLPCPELCPDAVYRLMERCWEYDPGQRPSFSTVHQELQS  252 (252)
T ss_pred             HHHHHHHHHHHHhCCCCCccccCHHHHHH-HHHcCCCCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhC
Confidence            9999999999997 888887665444332 233334445566778999999999999999999999999998863

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=99.93  E-value=2.2e-25  Score=149.29  Aligned_cols=142  Identities=26%  Similarity=0.412  Sum_probs=111.9

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccccC--------CcccCCcccCccccccCCCCCCcchhh
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQR--------GRCYYPAWMSPEALQKKPGDRNLEACD   76 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~--------~~~~~~~~~~pe~~~~~~~~~~~~~~d   76 (153)
                      ..-++.|||++++.|+||.+.||+++.++.+++.  |||.+....        ...++..|++||...+.   ..+.++|
T Consensus       111 l~~aL~~lH~~~i~H~dl~p~Nill~~~~~~~L~--dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~---~~~~~~D  185 (262)
T cd05071         111 IASGMAYVERMNYVHRDLRAANILVGENLVCKVA--DFGLARLIEDNEYTARQGAKFPIKWTAPEAALYG---RFTIKSD  185 (262)
T ss_pred             HHHHHHHHHHCCccccccCcccEEEcCCCcEEec--cCCceeeccccccccccCCcccceecCHhHhccC---CCCchhh
Confidence            3456789999999999999999999999988888  999874321        12344579999987653   3458899


Q ss_pred             HHHHHHHHHHHHh-CCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHhhhh
Q psy12581         77 MWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKMK  152 (153)
Q Consensus        77 v~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~~~~  152 (153)
                      +||+|+++|++++ |..||.+.........+ ......+.+...+..+.+++.+|++.+|++||+++++++.|+...
T Consensus       186 vwslG~~l~ellt~g~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~~~  261 (262)
T cd05071         186 VWSFGILLTELTTKGRVPYPGMVNREVLDQV-ERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYF  261 (262)
T ss_pred             HHHHHHHHHHHHcCCCCCCCCCChHHHHHHH-hcCCCCCCccccCHHHHHHHHHHccCCcccCCCHHHHHHHHHHhc
Confidence            9999999999999 88898776655444333 233334445567889999999999999999999999999998753

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=99.93  E-value=4e-26  Score=153.05  Aligned_cols=141  Identities=22%  Similarity=0.335  Sum_probs=106.0

Q ss_pred             hhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc-------CCcccCCcccCccccccCCCCCCcchhhHH
Q psy12581          6 IVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ-------RGRCYYPAWMSPEALQKKPGDRNLEACDMW   78 (153)
Q Consensus         6 ~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~-------~~~~~~~~~~~pe~~~~~~~~~~~~~~dv~   78 (153)
                      .-+..|||++++.|+|+.+.||+++.++.+++.  |||++...       ....++..|++||.+.......++.++|+|
T Consensus       116 ~~~l~~lH~~~i~H~dl~p~nill~~~~~~~l~--dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvw  193 (267)
T cd06646         116 LQGLAYLHSKGKMHRDIKGANILLTDNGDVKLA--DFGVAAKITATIAKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIW  193 (267)
T ss_pred             HHHHHHHHHCCccccCCCHHHEEECCCCCEEEC--cCccceeecccccccCccccCccccCHhHcccccCCCCcchhhHH
Confidence            446789999999999999999999999988888  99987432       123567889999988543333456789999


Q ss_pred             HHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccC---CCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHH
Q psy12581         79 SFAVLLWELATREVPFADLTPMEVGMKVALEGLRIT---IPPGISSHLSKLIRICMNEDPGKRPTFDMVLPIL  148 (153)
Q Consensus        79 s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L  148 (153)
                      |+|++++++++|..||...................+   .+..++..+.+++.+||..+|++||+++++++.|
T Consensus       194 s~G~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l  266 (267)
T cd06646         194 AVGITAIELAELQPPMFDLHPMRALFLMSKSNFQPPKLKDKTKWSSTFHNFVKISLTKNPKKRPTAERLLTHL  266 (267)
T ss_pred             HHHHHHHHHHhCCCCccccchhhhheeeecCCCCCCCCccccccCHHHHHHHHHHhhCChhhCcCHHHHhcCC
Confidence            999999999999999865543332221111111111   1234678999999999999999999999988653

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>KOG0577|consensus

Probab=99.93  E-value=1.5e-26  Score=163.88  Aligned_cols=140  Identities=19%  Similarity=0.255  Sum_probs=121.2

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccc---ccCCcccCCcccCccccccCCCCCCcchhhHHHHH
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSF---QQRGRCYYPAWMSPEALQKKPGDRNLEACDMWSFA   81 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~---~~~~~~~~~~~~~pe~~~~~~~~~~~~~~dv~s~g   81 (153)
                      +.-.+.|||+.+.+|+||+..||++++.|.+|+.  |||.+.   -..++.|||+||+||++.....+.++-+.||||+|
T Consensus       135 aL~gLaYLHS~~~IHRDiKAGNILLse~g~VKLa--DFGSAsi~~PAnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLG  212 (948)
T KOG0577|consen  135 ALQGLAYLHSHNRIHRDIKAGNILLSEPGLVKLA--DFGSASIMAPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLG  212 (948)
T ss_pred             HHHHHHHHHHhhHHhhhccccceEecCCCeeeec--cccchhhcCchhcccCCccccchhHheeccccccCCccceeecc
Confidence            3446789999999999999999999999999999  999873   23567999999999999876666788899999999


Q ss_pred             HHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581         82 VLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus        82 ~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      ++..|+...++|+.+.+....++.+.+.....-....++..+..|+..||+.-|..|||.++++.
T Consensus       213 ITCIELAERkPPlFnMNAMSALYHIAQNesPtLqs~eWS~~F~~Fvd~CLqKipqeRptse~ll~  277 (948)
T KOG0577|consen  213 ITCIELAERKPPLFNMNAMSALYHIAQNESPTLQSNEWSDYFRNFVDSCLQKIPQERPTSEELLK  277 (948)
T ss_pred             chhhhhhhcCCCccCchHHHHHHHHHhcCCCCCCCchhHHHHHHHHHHHHhhCcccCCcHHHHhh
Confidence            99999999999999999998888877655433334568999999999999999999999998875

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=99.93  E-value=1.7e-25  Score=149.26  Aligned_cols=139  Identities=24%  Similarity=0.417  Sum_probs=109.9

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccccCC--------cccCCcccCccccccCCCCCCcchhh
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQRG--------RCYYPAWMSPEALQKKPGDRNLEACD   76 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~~--------~~~~~~~~~pe~~~~~~~~~~~~~~d   76 (153)
                      ..-++.|||.+++.|+||.+.||+++.++.+|+.  |||.+.....        ..++..|++||.+.+.   ..+.++|
T Consensus       109 i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~kl~--dfg~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~---~~~~~~D  183 (256)
T cd05059         109 VCEAMEYLESNGFIHRDLAARNCLVGEDNVVKVS--DFGLARYVLDDQYTSSQGTKFPVKWAPPEVFDYS---RFSSKSD  183 (256)
T ss_pred             HHHHHHHHHHCCcccccccHhhEEECCCCcEEEC--CcccceecccccccccCCCCCCccccCHHHhccC---CCCchhh
Confidence            3456789999999999999999999999988888  9998743211        1223469999998754   3457899


Q ss_pred             HHHHHHHHHHHHh-CCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHh
Q psy12581         77 MWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILD  149 (153)
Q Consensus        77 v~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~  149 (153)
                      +||+|+++|++++ |..||........... .........+...+..+.+++.+||..+|++|||+.++++.|.
T Consensus       184 i~slG~il~~l~~~g~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~l~  256 (256)
T cd05059         184 VWSFGVLMWEVFSEGKMPYERFSNSEVVES-VSAGYRLYRPKLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQLT  256 (256)
T ss_pred             HHHHHHHHHHHhccCCCCCCCCCHHHHHHH-HHcCCcCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHhC
Confidence            9999999999998 8999977665544333 3334344556678999999999999999999999999998763

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=99.93  E-value=1.5e-25  Score=152.31  Aligned_cols=142  Identities=25%  Similarity=0.367  Sum_probs=108.7

Q ss_pred             chhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc---------CCcccCCcccCccccccCCCCCCcch
Q psy12581          4 KKIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ---------RGRCYYPAWMSPEALQKKPGDRNLEA   74 (153)
Q Consensus         4 ~~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~---------~~~~~~~~~~~pe~~~~~~~~~~~~~   74 (153)
                      +.+-++.|||++++.|+||.+.||+++.++.+++.  |||.+...         ....++..|++||.+.+.   ..+.+
T Consensus       138 ~i~~al~~LH~~~i~H~dlkp~Nili~~~~~~~l~--dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~  212 (296)
T cd05051         138 QIASGMRYLESLNFVHRDLATRNCLVGKNYTIKIA--DFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLG---KFTTK  212 (296)
T ss_pred             HHHHHHHHHHHcCccccccchhceeecCCCceEEc--cccceeecccCcceeecCcCCCCceecCHHHhhcC---CCCcc
Confidence            34556789999999999999999999999888888  99987432         122345689999988753   34588


Q ss_pred             hhHHHHHHHHHHHHh--CCCCCCCCCchhhhHHHHhh------ccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581         75 CDMWSFAVLLWELAT--REVPFADLTPMEVGMKVALE------GLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus        75 ~dv~s~g~~~~~~~~--g~~p~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      +|+||+|+++|++++  +..||...............      ....+.+...+.++.+++.+||+.+|++|||+.++++
T Consensus       213 ~Dv~slG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~  292 (296)
T cd05051         213 SDVWAFGVTLWEILTLCREQPYEHLTDQQVIENAGHFFRDDGRQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHL  292 (296)
T ss_pred             chhhhhHHHHHHHHhcCCCCCCCCcChHHHHHHHHhccccccccccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHH
Confidence            999999999999987  67788766554443332211      1112234456789999999999999999999999999


Q ss_pred             HHhh
Q psy12581        147 ILDK  150 (153)
Q Consensus       147 ~L~~  150 (153)
                      .|++
T Consensus       293 ~L~~  296 (296)
T cd05051         293 FLQR  296 (296)
T ss_pred             HhcC
Confidence            8863

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=99.93  E-value=1.5e-25  Score=149.32  Aligned_cols=136  Identities=24%  Similarity=0.286  Sum_probs=109.4

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc-------CCcccCCcccCccccccCCCCCCcchhhH
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ-------RGRCYYPAWMSPEALQKKPGDRNLEACDM   77 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~-------~~~~~~~~~~~pe~~~~~~~~~~~~~~dv   77 (153)
                      ..-++.|||.+++.|+|+.++||+++.++.+++.  |||++...       ....+++.|++||...+.   ..+.++|+
T Consensus       110 l~~al~~lH~~~i~h~dl~~~nili~~~~~~~l~--df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di  184 (256)
T cd08529         110 ILLGLAHLHSKKILHRDIKSLNLFLDAYDNVKIG--DLGVAKLLSDNTNFANTIVGTPYYLSPELCEDK---PYNEKSDV  184 (256)
T ss_pred             HHHHHHHHHHCCcccCCCCcceEEEeCCCCEEEc--ccccceeccCccchhhccccCccccCHHHhcCC---CCCCccch
Confidence            4456789999999999999999999999988888  99987432       123567889999998764   34578999


Q ss_pred             HHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581         78 WSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus        78 ~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      ||+|++++++++|+.||............. .....+.+...+..+.+++.+||+.+|++||++.++++
T Consensus       185 ~slG~il~~l~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~  252 (256)
T cd08529         185 WALGVVLYECCTGKHPFDANNQGALILKII-RGVFPPVSQMYSQQLAQLIDQCLTKDYRQRPDTFQLLR  252 (256)
T ss_pred             HHHHHHHHHHHhCCCCCCCCCHHHHHHHHH-cCCCCCCccccCHHHHHHHHHHccCCcccCcCHHHHhh
Confidence            999999999999999998776544443333 23334445567889999999999999999999999875

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=99.93  E-value=1.8e-25  Score=151.45  Aligned_cols=139  Identities=25%  Similarity=0.469  Sum_probs=110.2

Q ss_pred             hhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc---------CCcccCCcccCccccccCCCCCCcchhh
Q psy12581          6 IVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ---------RGRCYYPAWMSPEALQKKPGDRNLEACD   76 (153)
Q Consensus         6 ~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~---------~~~~~~~~~~~pe~~~~~~~~~~~~~~d   76 (153)
                      .-++.|||++++.|+||.+.||+++.++.+++.  |||.+...         .....+..|++||.+.+.   .++.++|
T Consensus       140 ~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~--dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~D  214 (288)
T cd05050         140 AAGMAYLSERKFVHRDLATRNCLVGENMVVKIA--DFGLSRNIYSADYYKASENDAIPIRWMPPESIFYN---RYTTESD  214 (288)
T ss_pred             HHHHHHHHhCCeecccccHhheEecCCCceEEC--ccccceecccCccccccCCCccChhhcCHHHHhcC---CCCchhH
Confidence            446789999999999999999999999988888  99987432         112234569999988653   4558899


Q ss_pred             HHHHHHHHHHHHh-CCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHhh
Q psy12581         77 MWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDK  150 (153)
Q Consensus        77 v~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~~  150 (153)
                      +||+|+++|++++ |..||.+....+....+. .+.....+...+..+.+++.+||+.+|++|||+.++++.|++
T Consensus       215 v~slG~il~el~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~~  288 (288)
T cd05050         215 VWAYGVVLWEIFSYGMQPYYGMAHEEVIYYVR-DGNVLSCPDNCPLELYNLMRLCWSKLPSDRPSFASINRILQR  288 (288)
T ss_pred             HHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHh-cCCCCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhhC
Confidence            9999999999997 888887766555444332 333334456678999999999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=99.93  E-value=7.6e-27  Score=160.78  Aligned_cols=136  Identities=21%  Similarity=0.345  Sum_probs=110.6

Q ss_pred             chhhHHhhhhc-CCCCCCCeeeeeeeeccccchhhccccccccccc-------CCcccCCcccCccccccCCCCCCcchh
Q psy12581          4 KKIVYSFYLNS-KKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ-------RGRCYYPAWMSPEALQKKPGDRNLEAC   75 (153)
Q Consensus         4 ~~~~~~~~lh~-~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~-------~~~~~~~~~~~pe~~~~~~~~~~~~~~   75 (153)
                      ...-++.|||+ +++.|+||++.||+++.++.+|+.  |||++...       ....|++.|++||.+.+.   .++.++
T Consensus       103 qi~~aL~~lH~~~~ivHrDikp~NIll~~~~~~kL~--Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~  177 (325)
T cd05594         103 EIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKIT--DFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDN---DYGRAV  177 (325)
T ss_pred             HHHHHHHHHHhcCCEEecCCCCCeEEECCCCCEEEe--cCCCCeecCCCCcccccccCCcccCCHHHHccC---CCCCcc
Confidence            34567899996 899999999999999999998888  99987421       223688999999998764   345889


Q ss_pred             hHHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCC-----CHHHHHH
Q psy12581         76 DMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRP-----TFDMVLP  146 (153)
Q Consensus        76 dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----s~~~~l~  146 (153)
                      |+||+|+++|++++|..||.+.........+...  ....|...++.+.+++.+||+.||++|+     ++.++++
T Consensus       178 DiwslG~il~el~tG~~Pf~~~~~~~~~~~i~~~--~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~  251 (325)
T cd05594         178 DWWGLGVVMYEMMCGRLPFYNQDHEKLFELILME--EIRFPRTLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQ  251 (325)
T ss_pred             ccccccceeeeeccCCCCCCCCCHHHHHHHHhcC--CCCCCCCCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhc
Confidence            9999999999999999999877655554444333  3445777899999999999999999997     8888874

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=99.93  E-value=2e-25  Score=149.56  Aligned_cols=143  Identities=23%  Similarity=0.262  Sum_probs=111.1

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccccC-------CcccCCcccCccccccCCCCCCcchhhH
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQR-------GRCYYPAWMSPEALQKKPGDRNLEACDM   77 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~-------~~~~~~~~~~pe~~~~~~~~~~~~~~dv   77 (153)
                      ..-+..|||++++.|+||.+.||+++.++.+++.  |||.+....       ...++..|++||.+.+.   .++.++|+
T Consensus       115 l~~~l~~lh~~~i~h~dl~p~nil~~~~~~~~l~--d~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~---~~~~~~Di  189 (267)
T cd08224         115 LCSALEHMHSKRIMHRDIKPANVFITATGVVKLG--DLGLGRFFSSKTTAAHSLVGTPYYMSPERIHEN---GYNFKSDI  189 (267)
T ss_pred             HHHHHHHHHhCCEecCCcChhhEEECCCCcEEEe--ccceeeeccCCCcccceecCCccccCHHHhccC---CCCchhcH
Confidence            3456789999999999999999999999988888  999874321       23567789999988753   34578999


Q ss_pred             HHHHHHHHHHHhCCCCCCCCCch-hhhHHHHhhccccCCCC-CCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHhhhh
Q psy12581         78 WSFAVLLWELATREVPFADLTPM-EVGMKVALEGLRITIPP-GISSHLSKLIRICMNEDPGKRPTFDMVLPILDKMK  152 (153)
Q Consensus        78 ~s~g~~~~~~~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~~~~  152 (153)
                      ||+|++++++++|..||...... .........+...+.+. ..+..+.+++.+||..+|++|||+.++++.|+.+.
T Consensus       190 ~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~~  266 (267)
T cd08224         190 WSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEKCDYPPLPADHYSEELRDLVSRCINPDPEKRPDISYVLQVAKEMH  266 (267)
T ss_pred             HHHHHHHHHHHHCCCCcccCCccHHHHHhhhhcCCCCCCChhhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHHhc
Confidence            99999999999999998654321 11112222233333444 67789999999999999999999999999999875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=99.93  E-value=2.6e-25  Score=150.07  Aligned_cols=142  Identities=21%  Similarity=0.320  Sum_probs=114.3

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccccCC---------cccCCcccCccccccCCCCCCcchh
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQRG---------RCYYPAWMSPEALQKKPGDRNLEAC   75 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~~---------~~~~~~~~~pe~~~~~~~~~~~~~~   75 (153)
                      .+-++.|||++++.|+||.+.||+++.++.+++.  |||.+.....         ..++..|++||.+...   .++.++
T Consensus       118 i~~~l~~LH~~~i~H~di~p~nil~~~~~~~kL~--dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~---~~~~~~  192 (279)
T cd05057         118 IAKGMSYLEEKRLVHRDLAARNVLVKTPQHVKIT--DFGLAKLLDVDEKEYHAEGGKVPIKWMALESILHR---IYTHKS  192 (279)
T ss_pred             HHHHHHHHHhCCEEecccCcceEEEcCCCeEEEC--CCcccccccCcccceecCCCcccccccCHHHhhcC---CcCchh
Confidence            4457899999999999999999999999988888  9998743211         1224579999987643   345789


Q ss_pred             hHHHHHHHHHHHHh-CCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHhhhh
Q psy12581         76 DMWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKMK  152 (153)
Q Consensus        76 dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~~~~  152 (153)
                      |+||+|++++++++ |..||.+....+....+ ..+...+.+...+..+.+++.+||..+|+.||++.++++.|.++.
T Consensus       193 Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~  269 (279)
T cd05057         193 DVWSYGVTVWELMTFGAKPYEGIPAVEIPDLL-EKGERLPQPPICTIDVYMVLVKCWMIDAESRPTFKELINEFSKMA  269 (279)
T ss_pred             hHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHH-hCCCCCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHH
Confidence            99999999999998 99999887655544333 344455556678889999999999999999999999999998864

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=99.93  E-value=2.2e-26  Score=158.53  Aligned_cols=133  Identities=18%  Similarity=0.208  Sum_probs=107.9

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc-------CCcccCCcccCccccccCCCCCCcchhhH
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ-------RGRCYYPAWMSPEALQKKPGDRNLEACDM   77 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~-------~~~~~~~~~~~pe~~~~~~~~~~~~~~dv   77 (153)
                      ..-++.|||++++.|+||++.||+++.++.+++.  |||++...       ....|++.|++||.+.+.   .++.++|+
T Consensus       105 i~~~L~~lH~~giiHrDlkp~Nili~~~~~~kl~--DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~Di  179 (325)
T cd05602         105 IASALGYLHSLNIVYRDLKPENILLDSQGHIVLT--DFGLCKENIEHNGTTSTFCGTPEYLAPEVLHKQ---PYDRTVDW  179 (325)
T ss_pred             HHHHHHHHHHCCeEecCCCHHHeEECCCCCEEEc--cCCCCcccccCCCCcccccCCccccCHHHHcCC---CCCCcccc
Confidence            3456789999999999999999999999988888  99987432       234688999999998764   34578999


Q ss_pred             HHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHH
Q psy12581         78 WSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMV  144 (153)
Q Consensus        78 ~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~  144 (153)
                      ||+|+++|++++|..||.+.........+...  ....+...+..+.+++.+||+.+|.+|+++.+.
T Consensus       180 wslG~il~el~~g~~pf~~~~~~~~~~~i~~~--~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~  244 (325)
T cd05602         180 WCLGAVLYEMLYGLPPFYSRNTAEMYDNILNK--PLQLKPNITNSARHLLEGLLQKDRTKRLGAKDD  244 (325)
T ss_pred             ccccHHHHHHhcCCCCCCCCCHHHHHHHHHhC--CcCCCCCCCHHHHHHHHHHcccCHHHCCCCCCC
Confidence            99999999999999999877665554444433  233455688999999999999999999987643

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>KOG0196|consensus

Probab=99.93  E-value=9.1e-27  Score=168.58  Aligned_cols=140  Identities=24%  Similarity=0.449  Sum_probs=122.8

Q ss_pred             HHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccccC----------CcccCCcccCccccccCCCCCCcchhhH
Q psy12581          8 YSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQR----------GRCYYPAWMSPEALQKKPGDRNLEACDM   77 (153)
Q Consensus         8 ~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~----------~~~~~~~~~~pe~~~~~~~~~~~~~~dv   77 (153)
                      ..+||...+..|+|+..+||+++.+-.+||+  |||++...+          +......|+|||.+...   +++.++||
T Consensus       743 GMkYLsdm~YVHRDLAARNILVNsnLvCKVs--DFGLSRvledd~~~~ytt~GGKIPiRWTAPEAIa~R---KFTsASDV  817 (996)
T KOG0196|consen  743 GMKYLSDMNYVHRDLAARNILVNSNLVCKVS--DFGLSRVLEDDPEAAYTTLGGKIPIRWTAPEAIAYR---KFTSASDV  817 (996)
T ss_pred             HhHHHhhcCchhhhhhhhheeeccceEEEec--cccceeecccCCCccccccCCccceeecChhHhhhc---ccCchhhc
Confidence            4689999999999999999999999999999  999994331          12334689999999864   56789999


Q ss_pred             HHHHHHHHHHHh-CCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHhhhhC
Q psy12581         78 WSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKMKR  153 (153)
Q Consensus        78 ~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~~~~~  153 (153)
                      ||+|+++||.++ |..||......+... .+.++++++.|.+++..+.+++..||+.|-..||++.+++..|+++.|
T Consensus       818 WSyGIVmWEVmSyGERPYWdmSNQdVIk-aIe~gyRLPpPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDklIr  893 (996)
T KOG0196|consen  818 WSYGIVMWEVMSYGERPYWDMSNQDVIK-AIEQGYRLPPPMDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKLIR  893 (996)
T ss_pred             cccceEEEEecccCCCcccccchHHHHH-HHHhccCCCCCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhc
Confidence            999999999987 999999998877764 456889999999999999999999999999999999999999999853

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=99.93  E-value=2.5e-26  Score=158.57  Aligned_cols=137  Identities=20%  Similarity=0.191  Sum_probs=106.0

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc--------CCcccCCcccCccccccCCCCCCcchhh
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ--------RGRCYYPAWMSPEALQKKPGDRNLEACD   76 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~--------~~~~~~~~~~~pe~~~~~~~~~~~~~~d   76 (153)
                      ..-++.|||++++.|+||++.||+++.++.+|+.  |||++...        ....|++.|++||.+.+..  ..+.++|
T Consensus       114 i~~~l~~lH~~~ivHrDlkp~Nili~~~~~~kl~--DfG~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~~D  189 (332)
T cd05614         114 IILALEHLHKLGIVYRDIKLENILLDSEGHVVLT--DFGLSKEFLSEEKERTYSFCGTIEYMAPEIIRGKG--GHGKAVD  189 (332)
T ss_pred             HHHHHHHHHHCCcEecCCCHHHeEECCCCCEEEe--eCcCCccccccCCCccccccCCccccCHHHhcCCC--CCCCccc
Confidence            4457899999999999999999999999988888  99987431        1236889999999987532  2347899


Q ss_pred             HHHHHHHHHHHHhCCCCCCCCCchh---hhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCC-----CHHHHHH
Q psy12581         77 MWSFAVLLWELATREVPFADLTPME---VGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRP-----TFDMVLP  146 (153)
Q Consensus        77 v~s~g~~~~~~~~g~~p~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----s~~~~l~  146 (153)
                      +||+|+++|++++|..||.......   ...... .......+...+..+.+++.+||+.||++||     +++++++
T Consensus       190 iwslG~il~elltg~~pf~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~  266 (332)
T cd05614         190 WWSLGILIFELLTGASPFTLEGERNTQSEVSRRI-LKCDPPFPSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKE  266 (332)
T ss_pred             cccchhhhhhhhcCCCCCCCCCCCCCHHHHHHHH-hcCCCCCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHc
Confidence            9999999999999999996533221   111111 1223455677899999999999999999999     6777764

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=99.93  E-value=1.9e-26  Score=160.08  Aligned_cols=137  Identities=21%  Similarity=0.225  Sum_probs=109.9

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccccC-----------------------------------
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQR-----------------------------------   49 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~-----------------------------------   49 (153)
                      ..-++.|||++++.|+||++.||+++.++.+++.  |||++....                                   
T Consensus       110 i~~aL~~LH~~giiH~Dlkp~NIll~~~~~~kL~--Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (350)
T cd05573         110 LVLALDSVHKLGFIHRDIKPDNILIDADGHIKLA--DFGLCKKMNKAKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRA  187 (350)
T ss_pred             HHHHHHHHHHCCeeccCCCHHHeEECCCCCEEee--cCCCCccCcccCcccccccccccccccccccccccccccccccc
Confidence            4557899999999999999999999999999988  999874321                                   


Q ss_pred             -CcccCCcccCccccccCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCC--CCCCHHHHHH
Q psy12581         50 -GRCYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIP--PGISSHLSKL  126 (153)
Q Consensus        50 -~~~~~~~~~~pe~~~~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l  126 (153)
                       ...|++.|++||.+.+.   .++.++|+||+|+++|++++|+.||...........+.........|  ...++.+.++
T Consensus       188 ~~~~gt~~y~aPE~~~~~---~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~~~~~~l  264 (350)
T cd05573         188 NSTVGTPDYIAPEVLRGT---PYGLECDWWSLGVILYEMLYGFPPFYSDTLQETYNKIINWKESLRFPPDPPVSPEAIDL  264 (350)
T ss_pred             cccccCccccCHHHHcCC---CCCCceeeEecchhhhhhccCCCCCCCCCHHHHHHHHhccCCcccCCCCCCCCHHHHHH
Confidence             23578999999998764   45588999999999999999999998877655555554421222233  3358999999


Q ss_pred             HHHHhcCCCCCCCC-HHHHHHH
Q psy12581        127 IRICMNEDPGKRPT-FDMVLPI  147 (153)
Q Consensus       127 ~~~cl~~~p~~Rps-~~~~l~~  147 (153)
                      +.+|+. +|.+|++ ++++++.
T Consensus       265 i~~ll~-dp~~R~~s~~~ll~h  285 (350)
T cd05573         265 ICRLLC-DPEDRLGSFEEIKSH  285 (350)
T ss_pred             HHHHcc-ChhhcCCCHHHHhcC
Confidence            999997 9999999 9999863

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=99.93  E-value=1.3e-25  Score=149.66  Aligned_cols=136  Identities=19%  Similarity=0.259  Sum_probs=109.9

Q ss_pred             hhHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccccC-------CcccCCcccCccccccCCCCCCcchhhHH
Q psy12581          6 IVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQR-------GRCYYPAWMSPEALQKKPGDRNLEACDMW   78 (153)
Q Consensus         6 ~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~-------~~~~~~~~~~pe~~~~~~~~~~~~~~dv~   78 (153)
                      .-++.|||++++.|+||.+.||+++.++.+++.  |||.+....       ...+++.|++||...+.   ..+.++|+|
T Consensus       110 ~~al~~lH~~~i~H~dl~p~nili~~~~~~~l~--dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~---~~~~~~Dv~  184 (255)
T cd08219         110 CLGVQHIHEKRVLHRDIKSKNIFLTQNGKVKLG--DFGSARLLTSPGAYACTYVGTPYYVPPEIWENM---PYNNKSDIW  184 (255)
T ss_pred             HHHHHHHhhCCcccCCCCcceEEECCCCcEEEc--ccCcceeecccccccccccCCccccCHHHHccC---CcCchhhhh
Confidence            456789999999999999999999999988888  999874332       23577889999998754   345789999


Q ss_pred             HHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHH
Q psy12581         79 SFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPI  147 (153)
Q Consensus        79 s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~  147 (153)
                      |+|++++++++|..||...........+. .+...+.+...+..+.+++.+||+.+|++||++.+++..
T Consensus       185 slG~i~~~l~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~  252 (255)
T cd08219         185 SLGCILYELCTLKHPFQANSWKNLILKVC-QGSYKPLPSHYSYELRSLIKQMFKRNPRSRPSATTILSR  252 (255)
T ss_pred             hhchhheehhhccCCCCCCCHHHHHHHHh-cCCCCCCCcccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence            99999999999999998766544443333 333444566788899999999999999999999998764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=99.93  E-value=3.3e-25  Score=150.29  Aligned_cols=141  Identities=28%  Similarity=0.467  Sum_probs=111.8

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc---------CCcccCCcccCccccccCCCCCCcchh
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ---------RGRCYYPAWMSPEALQKKPGDRNLEAC   75 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~---------~~~~~~~~~~~pe~~~~~~~~~~~~~~   75 (153)
                      ...++.|||++++.|+||.+.||+++.++.+++.  |||++...         ....++..|++||.+.+.   ..+.++
T Consensus       128 l~~~l~~lH~~~i~H~dikp~nili~~~~~~~L~--Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~---~~~~~~  202 (288)
T cd05061         128 IADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIG--DFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDG---VFTTSS  202 (288)
T ss_pred             HHHHHHHHHhCCCcCCCCChheEEEcCCCcEEEC--cCCccccccccccccccCCCcccccccCHHHhccC---CCChHh
Confidence            3456789999999999999999999999988888  99987422         112345679999998753   345889


Q ss_pred             hHHHHHHHHHHHHh-CCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHhhh
Q psy12581         76 DMWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKM  151 (153)
Q Consensus        76 dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~~~  151 (153)
                      |+||+|++++++++ |..||.+....+....+. .+.....+...+..+.+++.+||+.+|++|||+.++++.|.+.
T Consensus       203 DvwslG~~l~el~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~  278 (288)
T cd05061         203 DMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVM-DGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDD  278 (288)
T ss_pred             HHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH-cCCCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhh
Confidence            99999999999998 788987766555443333 3333445666788999999999999999999999999988763

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=99.93  E-value=3e-25  Score=149.09  Aligned_cols=143  Identities=24%  Similarity=0.395  Sum_probs=114.2

Q ss_pred             chhhHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccccC--------CcccCCcccCccccccCCCCCCcchh
Q psy12581          4 KKIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQR--------GRCYYPAWMSPEALQKKPGDRNLEAC   75 (153)
Q Consensus         4 ~~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~--------~~~~~~~~~~pe~~~~~~~~~~~~~~   75 (153)
                      +..-++.|||++++.|+||.++||+++.++.+++.  |||++....        ...++..|++||.+...   .++.++
T Consensus       115 ~l~~~l~~lH~~~~~H~dl~p~nili~~~~~~~l~--d~g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~  189 (270)
T cd05056         115 QLSTALAYLESKRFVHRDIAARNVLVSSPDCVKLG--DFGLSRYLEDESYYKASKGKLPIKWMAPESINFR---RFTSAS  189 (270)
T ss_pred             HHHHHHHHHHhCCeeccccChheEEEecCCCeEEc--cCceeeecccccceecCCCCccccccChhhhccC---CCCchh
Confidence            44567899999999999999999999999988888  999874321        11234579999987653   345789


Q ss_pred             hHHHHHHHHHHHHh-CCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHhhhh
Q psy12581         76 DMWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKMK  152 (153)
Q Consensus        76 dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~~~~  152 (153)
                      |+||+|++++++++ |..||...........+ ..+...+.+...+..+.+++.+|+..+|++|||+.++++.|+++.
T Consensus       190 Di~slG~il~el~~~g~~pf~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~~  266 (270)
T cd05056         190 DVWMFGVCMWEILMLGVKPFQGVKNNDVIGRI-ENGERLPMPPNCPPTLYSLMTKCWAYDPSKRPRFTELKAQLSDIL  266 (270)
T ss_pred             hhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHH-HcCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence            99999999999886 99999777655544332 333345566778899999999999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=99.93  E-value=1.5e-26  Score=159.26  Aligned_cols=131  Identities=19%  Similarity=0.219  Sum_probs=106.8

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc-------CCcccCCcccCccccccCCCCCCcchhhH
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ-------RGRCYYPAWMSPEALQKKPGDRNLEACDM   77 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~-------~~~~~~~~~~~pe~~~~~~~~~~~~~~dv   77 (153)
                      ..-++.|||++++.|+||.+.||+++.++.+|+.  |||++...       ...+|++.|++||.+.+.   .++.++|+
T Consensus       105 i~~~l~~lH~~givH~dikp~NIll~~~~~~kl~--Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~Dv  179 (323)
T cd05575         105 IASALGYLHSLNIIYRDLKPENILLDSQGHVVLT--DFGLCKEGIEHSKTTSTFCGTPEYLAPEVLRKQ---PYDRTVDW  179 (323)
T ss_pred             HHHHHHHHHHCCeEeCCCCHHHeEECCCCcEEEe--ccCCCcccccCCCccccccCChhhcChhhhcCC---CCCccccc
Confidence            4457899999999999999999999999988888  99987431       223688999999998764   34578999


Q ss_pred             HHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHH
Q psy12581         78 WSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFD  142 (153)
Q Consensus        78 ~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~  142 (153)
                      ||+|+++|++++|..||.+.........+...  ....+...+..+.+++.+||+.+|++||++.
T Consensus       180 wslG~il~ell~g~~pf~~~~~~~~~~~i~~~--~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~  242 (323)
T cd05575         180 WCLGAVLYEMLYGLPPFYSRDTAEMYDNILNK--PLRLKPNISVSARHLLEGLLQKDRTKRLGAK  242 (323)
T ss_pred             cccchhhhhhhcCCCCCCCCCHHHHHHHHHcC--CCCCCCCCCHHHHHHHHHHhhcCHHhCCCCC
Confidence            99999999999999999877655554444433  2334556789999999999999999999874

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=99.93  E-value=1.4e-25  Score=151.94  Aligned_cols=137  Identities=15%  Similarity=0.075  Sum_probs=105.1

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc------CCcccCCcccCccccccCCCCCCcchhhHH
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ------RGRCYYPAWMSPEALQKKPGDRNLEACDMW   78 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~------~~~~~~~~~~~pe~~~~~~~~~~~~~~dv~   78 (153)
                      ..-++.|||++++.|+||.+.||+++.++.+|+.  |||++...      ....++..|++||.+.+.   .++.++|+|
T Consensus       117 i~~al~~lH~~~ivH~dikp~Nili~~~~~~kl~--dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Diw  191 (288)
T cd07863         117 FLRGLDFLHANCIVHRDLKPENILVTSGGQVKLA--DFGLARIYSCQMALTPVVVTLWYRAPEVLLQS---TYATPVDMW  191 (288)
T ss_pred             HHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEC--ccCccccccCcccCCCccccccccCchHhhCC---CCCCcchhh
Confidence            3457899999999999999999999999988888  99987432      223567889999998754   355889999


Q ss_pred             HHHHHHHHHHhCCCCCCCCCchhhhHHHHhhcc---------cc----------------CCCCCCCHHHHHHHHHHhcC
Q psy12581         79 SFAVLLWELATREVPFADLTPMEVGMKVALEGL---------RI----------------TIPPGISSHLSKLIRICMNE  133 (153)
Q Consensus        79 s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~---------~~----------------~~~~~~~~~~~~l~~~cl~~  133 (153)
                      |+|++++++++|.+||.+........++.....         ..                ......+..+.+++.+||+.
T Consensus       192 slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  271 (288)
T cd07863         192 SVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTF  271 (288)
T ss_pred             hHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhCCCChhhCcccccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhcc
Confidence            999999999999999977655444333221100         00                00123567789999999999


Q ss_pred             CCCCCCCHHHHHH
Q psy12581        134 DPGKRPTFDMVLP  146 (153)
Q Consensus       134 ~p~~Rps~~~~l~  146 (153)
                      ||++|||+.+++.
T Consensus       272 dP~~R~t~~~~l~  284 (288)
T cd07863         272 NPHKRISAFRALQ  284 (288)
T ss_pred             CcccCCCHHHHhc
Confidence            9999999999875

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>KOG0690|consensus

Probab=99.93  E-value=3.9e-26  Score=152.01  Aligned_cols=129  Identities=22%  Similarity=0.348  Sum_probs=113.9

Q ss_pred             chhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccc-------ccCCcccCCcccCccccccCCCCCCcchhh
Q psy12581          4 KKIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSF-------QQRGRCYYPAWMSPEALQKKPGDRNLEACD   76 (153)
Q Consensus         4 ~~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~-------~~~~~~~~~~~~~pe~~~~~~~~~~~~~~d   76 (153)
                      ....++.|||+++|+-+++++.|.++|++|++|+.  |||++.       .....||||.|+|||++...   .++...|
T Consensus       276 EIvsAL~YLHs~~ivYRDlKLENLlLDkDGHIKit--DFGLCKE~I~~g~t~kTFCGTPEYLAPEVleDn---DYgraVD  350 (516)
T KOG0690|consen  276 EIVSALGYLHSRNIVYRDLKLENLLLDKDGHIKIT--DFGLCKEEIKYGDTTKTFCGTPEYLAPEVLEDN---DYGRAVD  350 (516)
T ss_pred             HHHHHhhhhhhCCeeeeechhhhheeccCCceEee--ecccchhcccccceeccccCChhhcCchhhccc---cccceee
Confidence            34678999999999999999999999999999999  999983       23567999999999999864   4558999


Q ss_pred             HHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCC
Q psy12581         77 MWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRP  139 (153)
Q Consensus        77 v~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp  139 (153)
                      .|.+|+++|||++|+.||...+.......++...+  .+|...+++...++..+|..||.+|.
T Consensus       351 WWG~GVVMYEMmCGRLPFyn~dh~kLFeLIl~ed~--kFPr~ls~eAktLLsGLL~kdP~kRL  411 (516)
T KOG0690|consen  351 WWGVGVVMYEMMCGRLPFYNKDHEKLFELILMEDL--KFPRTLSPEAKTLLSGLLKKDPKKRL  411 (516)
T ss_pred             hhhhhHHHHHHHhccCcccccchhHHHHHHHhhhc--cCCccCCHHHHHHHHHHhhcChHhhc
Confidence            99999999999999999999888888777776654  45888999999999999999999996

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=99.93  E-value=2.1e-25  Score=153.96  Aligned_cols=138  Identities=18%  Similarity=0.223  Sum_probs=103.3

Q ss_pred             hhhHHhhhhcC-CCCCCCeeeeeeeeccccchhhccccccccccc-----CCcccCCcccCccccccCCCCCCcchhhHH
Q psy12581          5 KIVYSFYLNSK-KSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ-----RGRCYYPAWMSPEALQKKPGDRNLEACDMW   78 (153)
Q Consensus         5 ~~~~~~~lh~~-~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~-----~~~~~~~~~~~pe~~~~~~~~~~~~~~dv~   78 (153)
                      ..-++.|||++ ++.|+||++.||+++.++.+++.  |||++...     ....++..|++||.+.+.   .++.++|+|
T Consensus       112 i~~~l~~lH~~~~ivH~dlkp~Nil~~~~~~~kl~--Dfg~~~~~~~~~~~~~~g~~~y~aPE~~~~~---~~~~~~Diw  186 (331)
T cd06649         112 VLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLC--DFGVSGQLIDSMANSFVGTRSYMSPERLQGT---HYSVQSDIW  186 (331)
T ss_pred             HHHHHHHHhhcCCEEcCCCChhhEEEcCCCcEEEc--cCcccccccccccccCCCCcCcCCHhHhcCC---CCCchHhHH
Confidence            34567899986 59999999999999999988888  99987432     233678899999998764   355899999


Q ss_pred             HHHHHHHHHHhCCCCCCCCCchhhhHHH---------------------------------------------Hhhcccc
Q psy12581         79 SFAVLLWELATREVPFADLTPMEVGMKV---------------------------------------------ALEGLRI  113 (153)
Q Consensus        79 s~g~~~~~~~~g~~p~~~~~~~~~~~~~---------------------------------------------~~~~~~~  113 (153)
                      |+|+++|++++|+.||......+.....                                             ......+
T Consensus       187 slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (331)
T cd06649         187 SMGLSLVELAIGRYPIPPPDAKELEAIFGRPVVDGEEGEPHSISPRPRPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPP  266 (331)
T ss_pred             HHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccccCCccccCcccccccccccccccccccchhHHHHHHHHHhCCCc
Confidence            9999999999999999654322211000                                             0000011


Q ss_pred             CC-CCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHH
Q psy12581        114 TI-PPGISSHLSKLIRICMNEDPGKRPTFDMVLPI  147 (153)
Q Consensus       114 ~~-~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~  147 (153)
                      .. ....+.++.+++.+||+.||++|||++++++.
T Consensus       267 ~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h  301 (331)
T cd06649         267 KLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNH  301 (331)
T ss_pred             CCCCccccHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence            11 12357889999999999999999999999854

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=99.93  E-value=3.1e-25  Score=153.31  Aligned_cols=142  Identities=28%  Similarity=0.428  Sum_probs=113.3

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccccC---------CcccCCcccCccccccCCCCCCcchh
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQR---------GRCYYPAWMSPEALQKKPGDRNLEAC   75 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~---------~~~~~~~~~~pe~~~~~~~~~~~~~~   75 (153)
                      ..-++.|||.+++.|+||.+.||+++.++.+|+.  |||++....         ...++..|++||.+.+.   .++.++
T Consensus       143 i~~al~~LH~~givH~dlkp~Nill~~~~~~kL~--Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~  217 (334)
T cd05100         143 VARGMEYLASQKCIHRDLAARNVLVTEDNVMKIA--DFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDR---VYTHQS  217 (334)
T ss_pred             HHHHHHHHHHCCeeccccccceEEEcCCCcEEEC--CcccceecccccccccccCCCcCceEcCHHHhccC---CcCchh
Confidence            3446789999999999999999999999988888  999874321         11234579999998753   345789


Q ss_pred             hHHHHHHHHHHHHh-CCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHhhhh
Q psy12581         76 DMWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKMK  152 (153)
Q Consensus        76 dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~~~~  152 (153)
                      |+||+|++++++++ |..||.+.........+ ........+...+..+.+++.+||+.+|++||++.++++.|+++.
T Consensus       218 Di~slG~il~el~~~g~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~  294 (334)
T cd05100         218 DVWSFGVLLWEIFTLGGSPYPGIPVEELFKLL-KEGHRMDKPANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVL  294 (334)
T ss_pred             hhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHH-HcCCCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHh
Confidence            99999999999998 88898776655544333 334445556678889999999999999999999999999998774

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=99.93  E-value=2e-25  Score=150.86  Aligned_cols=139  Identities=23%  Similarity=0.301  Sum_probs=108.5

Q ss_pred             hhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc-------CCcccCCcccCccccccC--CCCCCcchhh
Q psy12581          6 IVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ-------RGRCYYPAWMSPEALQKK--PGDRNLEACD   76 (153)
Q Consensus         6 ~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~-------~~~~~~~~~~~pe~~~~~--~~~~~~~~~d   76 (153)
                      .-++.|||++++.|+||.+.||+++.++.+++.  |||++...       ....++..|++||.+...  ....++.++|
T Consensus       113 ~~~L~~LH~~~i~H~dlkp~nili~~~~~~kl~--dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~D  190 (282)
T cd06643         113 LEALNYLHENKIIHRDLKAGNILFTLDGDIKLA--DFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKAD  190 (282)
T ss_pred             HHHHHHHHHCCeeecCCCcccEEEccCCCEEEc--cccccccccccccccccccccccccCHhhccccCCCCCCCCccch
Confidence            446789999999999999999999999988888  99987432       223577899999987421  1234567899


Q ss_pred             HHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhc-cccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581         77 MWSFAVLLWELATREVPFADLTPMEVGMKVALEG-LRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus        77 v~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      +||+|++++++++|..||................ .....+..++..+.+++.+||+.+|++||++.++++
T Consensus       191 v~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~  261 (282)
T cd06643         191 VWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQ  261 (282)
T ss_pred             hhhHHHHHHHHccCCCCccccCHHHHHHHHhhcCCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            9999999999999999998766555444433221 122345567889999999999999999999998874

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=99.93  E-value=7.7e-26  Score=155.69  Aligned_cols=131  Identities=21%  Similarity=0.328  Sum_probs=108.2

Q ss_pred             chhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc-------CCcccCCcccCccccccCCCCCCcchhh
Q psy12581          4 KKIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ-------RGRCYYPAWMSPEALQKKPGDRNLEACD   76 (153)
Q Consensus         4 ~~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~-------~~~~~~~~~~~pe~~~~~~~~~~~~~~d   76 (153)
                      ....++.|||++++.|+||++.||+++.++.+++.  |||++...       ....|++.|++||.+.+.   .++.++|
T Consensus       109 qi~~al~~lH~~~ivHrDikp~Nill~~~~~ikL~--Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~D  183 (323)
T cd05615         109 EISVGLFFLHRRGIIYRDLKLDNVMLDSEGHIKIA--DFGMCKEHMVDGVTTRTFCGTPDYIAPEIIAYQ---PYGKSVD  183 (323)
T ss_pred             HHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEe--ccccccccCCCCccccCccCCccccCHHHHcCC---CCCCccc
Confidence            34567899999999999999999999999998888  99987431       233588999999998764   3457899


Q ss_pred             HHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCH
Q psy12581         77 MWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTF  141 (153)
Q Consensus        77 v~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~  141 (153)
                      +||+|++++++++|..||.+.........+...  ....|...+..+.+++.+||+.+|++|++.
T Consensus       184 iwslGvil~elltG~~pf~~~~~~~~~~~i~~~--~~~~p~~~~~~~~~li~~~l~~~p~~R~~~  246 (323)
T cd05615         184 WWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEH--NVSYPKSLSKEAVSICKGLMTKHPSKRLGC  246 (323)
T ss_pred             hhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhC--CCCCCccCCHHHHHHHHHHcccCHhhCCCC
Confidence            999999999999999999887766555555443  334567788999999999999999999974

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=99.93  E-value=4.2e-25  Score=147.63  Aligned_cols=140  Identities=29%  Similarity=0.466  Sum_probs=112.3

Q ss_pred             hhHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccccC--------CcccCCcccCccccccCCCCCCcchhhH
Q psy12581          6 IVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQR--------GRCYYPAWMSPEALQKKPGDRNLEACDM   77 (153)
Q Consensus         6 ~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~--------~~~~~~~~~~pe~~~~~~~~~~~~~~dv   77 (153)
                      .-+..|||++++.|+||.+.||+++.++.+++.  |||.+....        ....+..|++||.+.+.   ..+.++|+
T Consensus       113 ~~al~~lh~~~i~h~di~p~nili~~~~~~~l~--d~g~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~---~~~~~~Di  187 (261)
T cd05034         113 AEGMAYLESRNYIHRDLAARNILVGENLVCKIA--DFGLARLIEDDEYTAREGAKFPIKWTAPEAANYG---RFTIKSDV  187 (261)
T ss_pred             HHHHHHHHhCCcccCCcchheEEEcCCCCEEEC--ccccceeccchhhhhhhccCCCccccCHHHhccC---CcCchhHH
Confidence            456789999999999999999999999988888  999874432        11234579999988753   34578999


Q ss_pred             HHHHHHHHHHHh-CCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHhhh
Q psy12581         78 WSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKM  151 (153)
Q Consensus        78 ~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~~~  151 (153)
                      ||+|++++++++ |+.||.+.........+ ......+.+...+..+.+++.+||..+|++||+++++.+.|+.+
T Consensus       188 ~slG~il~~l~t~g~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~~  261 (261)
T cd05034         188 WSFGILLTEIVTYGRVPYPGMTNREVLEQV-ERGYRMPRPPNCPEELYDLMLQCWDKDPEERPTFEYLQSFLEDY  261 (261)
T ss_pred             HHHHHHHHHHHhCCCCCCCCCCHHHHHHHH-HcCCCCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHhcC
Confidence            999999999998 99999776655544433 23444455666788999999999999999999999999998863

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=99.93  E-value=2.8e-25  Score=151.15  Aligned_cols=141  Identities=24%  Similarity=0.348  Sum_probs=107.4

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccccC---------CcccCCcccCccccccCCCCCCcchh
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQR---------GRCYYPAWMSPEALQKKPGDRNLEAC   75 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~---------~~~~~~~~~~pe~~~~~~~~~~~~~~   75 (153)
                      .+-++.|||++++.|+||.+.||+++.++.+++.  |||++....         ....+..|++||.....   .++.++
T Consensus       139 i~~al~~lH~~~i~H~dlkp~Nili~~~~~~~l~--dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~---~~~~~~  213 (296)
T cd05095         139 IASGMKYLSSLNFVHRDLATRNCLVGKNYTIKIA--DFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLG---KFTTAS  213 (296)
T ss_pred             HHHHHHHHHHCCeecccCChheEEEcCCCCEEec--cCcccccccCCcceeccCcCcCccccCCHHHHhcC---Cccchh
Confidence            3456789999999999999999999999888888  999874321         11234679999987653   456899


Q ss_pred             hHHHHHHHHHHHHh--CCCCCCCCCchhhhHHHHh------hccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHH
Q psy12581         76 DMWSFAVLLWELAT--REVPFADLTPMEVGMKVAL------EGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPI  147 (153)
Q Consensus        76 dv~s~g~~~~~~~~--g~~p~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~  147 (153)
                      |+||+|+++|++++  |..||......+.......      .....+.+..++..+.+++.+||+.+|++||++.++.+.
T Consensus       214 DiwSlG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~  293 (296)
T cd05095         214 DVWAFGVTLWEILTLCKEQPYSQLSDEQVIENTGEFFRDQGRQVYLPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHAT  293 (296)
T ss_pred             hhhHHHHHHHHHHHhCCCCCccccChHHHHHHHHHHHhhccccccCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHH
Confidence            99999999999998  7788876554443322110      111223345677899999999999999999999999998


Q ss_pred             Hhh
Q psy12581        148 LDK  150 (153)
Q Consensus       148 L~~  150 (153)
                      |++
T Consensus       294 l~~  296 (296)
T cd05095         294 LLE  296 (296)
T ss_pred             HhC
Confidence            864

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=99.93  E-value=2.7e-25  Score=148.24  Aligned_cols=136  Identities=21%  Similarity=0.275  Sum_probs=109.2

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc-------CCcccCCcccCccccccCCCCCCcchhhH
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ-------RGRCYYPAWMSPEALQKKPGDRNLEACDM   77 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~-------~~~~~~~~~~~pe~~~~~~~~~~~~~~dv   77 (153)
                      ...+..|||++++.|+||.++||+++.++.+++.  |||.+...       ....+++.|++||...+.   ..+.++|+
T Consensus       111 l~~~l~~lH~~~i~H~di~p~nil~~~~~~~~l~--df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Dv  185 (257)
T cd08223         111 IAMALQYLHEKHILHRDLKTQNVFLTRTNIIKVG--DLGIARVLENQCDMASTLIGTPYYMSPELFSNK---PYNYKSDV  185 (257)
T ss_pred             HHHHHHHHHhCCeeccCCCchhEEEecCCcEEEe--cccceEEecccCCccccccCCcCccChhHhcCC---CCCchhhh
Confidence            4456789999999999999999999999988888  99987432       123577899999998764   34578999


Q ss_pred             HHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581         78 WSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus        78 ~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      ||+|++++++++|+.||............. .+.....+...+..+.+++.+||+.+|++||++.++++
T Consensus       186 ~slG~il~~l~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~  253 (257)
T cd08223         186 WALGCCVYEMATLKHAFNAKDMNSLVYRII-EGKLPPMPKDYSPELGELIATMLSKRPEKRPSVKSILR  253 (257)
T ss_pred             HHHHHHHHHHHcCCCCCCCCCHHHHHHHHH-hcCCCCCccccCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence            999999999999999997665444433333 33333456678899999999999999999999999875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=99.93  E-value=2.2e-25  Score=152.40  Aligned_cols=140  Identities=19%  Similarity=0.258  Sum_probs=108.4

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc---CCcccCCcccCccccccCCCCCCcchhhHHHHH
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ---RGRCYYPAWMSPEALQKKPGDRNLEACDMWSFA   81 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~---~~~~~~~~~~~pe~~~~~~~~~~~~~~dv~s~g   81 (153)
                      ..-++.|||+.++.|+||.+.||+++.++.+++.  |||++...   ....++..|++||.+.+.....++.++|+|++|
T Consensus       124 l~~~L~~LH~~~i~H~dl~p~nIl~~~~~~~kL~--dfg~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G  201 (307)
T cd06607         124 ALQGLAYLHSHERIHRDIKAGNILLTEPGTVKLA--DFGSASLVSPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLG  201 (307)
T ss_pred             HHHHHHHHHHCCceecCCCcccEEECCCCCEEEe--ecCcceecCCCCCccCCccccCceeeeccCCCCCCcccchHHHH
Confidence            3456789999999999999999999999988888  99987433   233567889999987533233456789999999


Q ss_pred             HHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581         82 VLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus        82 ~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      +++|++++|..||...........+.........+..++..+.+++.+||..+|++||++.+++.
T Consensus       202 ~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~  266 (307)
T cd06607         202 ITCIELAERKPPLFNMNAMSALYHIAQNDSPTLSSNDWSDYFRNFVDSCLQKIPQDRPSSEELLK  266 (307)
T ss_pred             HHHHHHHcCCCCCCCccHHHHHHHHhcCCCCCCCchhhCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence            99999999999997766554433332222111123346788999999999999999999999976

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=99.93  E-value=2.7e-25  Score=149.88  Aligned_cols=138  Identities=25%  Similarity=0.380  Sum_probs=108.1

Q ss_pred             hhHHhhhhcCCCCCCCeeeeeeeecccc---chhhcccccccccccC---------CcccCCcccCccccccCCCCCCcc
Q psy12581          6 IVYSFYLNSKKSKTSNAFLFCCQIDEDL---TARINMADAQFSFQQR---------GRCYYPAWMSPEALQKKPGDRNLE   73 (153)
Q Consensus         6 ~~~~~~lh~~~i~~~ni~~~~~~~~~~~---~~kl~~~d~g~~~~~~---------~~~~~~~~~~pe~~~~~~~~~~~~   73 (153)
                      .-+..|||++++.|+||.++||+++.++   .+|+.  |||++....         ....+..|++||.+.+.   .++.
T Consensus       126 ~~~l~~LH~~~ivH~dlkp~nil~~~~~~~~~~kl~--dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~  200 (277)
T cd05036         126 AKGCKYLEENHFIHRDIAARNCLLTCKGPGRVAKIA--DFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDG---IFTS  200 (277)
T ss_pred             HHHHHHHHHCCEeecccchheEEEeccCCCcceEec--cCccccccCCccceecCCCCCccHhhCCHHHHhcC---CcCc
Confidence            4457899999999999999999998765   35555  999875331         11224579999998753   4568


Q ss_pred             hhhHHHHHHHHHHHHh-CCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHh
Q psy12581         74 ACDMWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILD  149 (153)
Q Consensus        74 ~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~  149 (153)
                      ++|+||+|++++++++ |..||.+......... .........+...+..+.+++.+||+.+|++||++.++++.|+
T Consensus       201 ~~DiwslG~il~el~~~g~~pf~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~  276 (277)
T cd05036         201 KTDVWSFGVLLWEIFSLGYMPYPGRTNQEVMEF-VTGGGRLDPPKGCPGPVYRIMTDCWQHTPEDRPNFATILERIQ  276 (277)
T ss_pred             hhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH-HHcCCcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhh
Confidence            9999999999999996 9999987665554433 3333345556778899999999999999999999999999886

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=99.93  E-value=2e-25  Score=156.25  Aligned_cols=138  Identities=17%  Similarity=0.158  Sum_probs=105.9

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc--------CCcccCCcccCccccccCCCCCCcchhh
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ--------RGRCYYPAWMSPEALQKKPGDRNLEACD   76 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~--------~~~~~~~~~~~pe~~~~~~~~~~~~~~d   76 (153)
                      ..-++.|||++++.|+||++.||+++.++.+|+.  |||++...        ....+++.|++||.+.+..  .++.++|
T Consensus       112 i~~aL~~LH~~~ivH~dlkp~Nili~~~~~~kL~--Dfg~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~--~~~~~~D  187 (372)
T cd07853         112 ILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKIC--DFGLARVEEPDESKHMTQEVVTQYYRAPEILMGSR--HYTSAVD  187 (372)
T ss_pred             HHHHHHHHHhCCeeCCCCChHHEEECCCCCEEec--cccceeecccCccccCCCCCcCCCcCCHHHHcCCC--CCCcHHH
Confidence            3457899999999999999999999999988888  99988432        1235678899999987532  2457899


Q ss_pred             HHHHHHHHHHHHhCCCCCCCCCchhhhHHHHh-----------------------hcccc-------CCCCCCCHHHHHH
Q psy12581         77 MWSFAVLLWELATREVPFADLTPMEVGMKVAL-----------------------EGLRI-------TIPPGISSHLSKL  126 (153)
Q Consensus        77 v~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~-----------------------~~~~~-------~~~~~~~~~~~~l  126 (153)
                      +||+|++++++++|+.||.+.........+..                       .....       ......+..+.++
T Consensus       188 iwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  267 (372)
T cd07853         188 IWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSACEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHL  267 (372)
T ss_pred             HHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhHHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHH
Confidence            99999999999999999987655443322211                       01111       1123457789999


Q ss_pred             HHHHhcCCCCCCCCHHHHHH
Q psy12581        127 IRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus       127 ~~~cl~~~p~~Rps~~~~l~  146 (153)
                      +.+||+.||++|||+.++++
T Consensus       268 i~~mL~~dP~~R~t~~e~l~  287 (372)
T cd07853         268 LCRMLVFDPDKRISAADALA  287 (372)
T ss_pred             HHHhCCCChhhCcCHHHHhc
Confidence            99999999999999999985

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=99.93  E-value=4.2e-25  Score=146.77  Aligned_cols=139  Identities=25%  Similarity=0.433  Sum_probs=110.4

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccccC--------CcccCCcccCccccccCCCCCCcchhh
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQR--------GRCYYPAWMSPEALQKKPGDRNLEACD   76 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~--------~~~~~~~~~~pe~~~~~~~~~~~~~~d   76 (153)
                      ..-++.|+|.+++.|+||.+.||+++.++.+++.  |||++....        ...++..|++||.+.+.   ..+.++|
T Consensus       102 i~~~l~~lH~~~~~H~dl~p~nili~~~~~~~l~--d~g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~D  176 (250)
T cd05085         102 AAAGMAYLESKNCIHRDLAARNCLVGENNVLKIS--DFGMSRQEDDGIYSSSGLKQIPIKWTAPEALNYG---RYSSESD  176 (250)
T ss_pred             HHHHHHHHHhCCeeecccChheEEEcCCCeEEEC--CCccceeccccccccCCCCCCcccccCHHHhccC---CCCchhH
Confidence            4456789999999999999999999999988888  999874321        11334569999998653   3457899


Q ss_pred             HHHHHHHHHHHHh-CCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHh
Q psy12581         77 MWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILD  149 (153)
Q Consensus        77 v~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~  149 (153)
                      +||+|++++++++ |..||........... .........+...+..+.+++.+||..+|++||++.++.+.|.
T Consensus       177 i~slG~ll~~~~~~g~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~  249 (250)
T cd05085         177 VWSYGILLWETFSLGVCPYPGMTNQQAREQ-VEKGYRMSCPQKCPDDVYKVMQRCWDYKPENRPKFSELQKELA  249 (250)
T ss_pred             HHHHHHHHHHHhcCCCCCCCCCCHHHHHHH-HHcCCCCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhc
Confidence            9999999999998 9999977654443333 3334444556678899999999999999999999999998875

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=99.93  E-value=3.9e-25  Score=148.40  Aligned_cols=139  Identities=28%  Similarity=0.479  Sum_probs=108.9

Q ss_pred             hhHHhhhhcCCCCCCCeeeeeeeecccc-----chhhccccccccccc---------CCcccCCcccCccccccCCCCCC
Q psy12581          6 IVYSFYLNSKKSKTSNAFLFCCQIDEDL-----TARINMADAQFSFQQ---------RGRCYYPAWMSPEALQKKPGDRN   71 (153)
Q Consensus         6 ~~~~~~lh~~~i~~~ni~~~~~~~~~~~-----~~kl~~~d~g~~~~~---------~~~~~~~~~~~pe~~~~~~~~~~   71 (153)
                      .-+..|||++++.|+|+.+.||+++.++     .+++.  |||++...         ....++..|++||.+.+.   ..
T Consensus       116 ~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~~~~~l~--dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~  190 (269)
T cd05044         116 AKGCVYLEQMHFIHRDLAARNCLVSEKGYDADRVVKIG--DFGLARDIYKSDYYRKEGEGLLPVRWMAPESLLDG---KF  190 (269)
T ss_pred             HHHHHHHHhCCcccCCCChheEEEecCCCCCCcceEEC--CcccccccccccccccCcccCCCccccCHHHHccC---Cc
Confidence            3456899999999999999999999877     56666  99987322         122345789999998753   35


Q ss_pred             cchhhHHHHHHHHHHHHh-CCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHhh
Q psy12581         72 LEACDMWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDK  150 (153)
Q Consensus        72 ~~~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~~  150 (153)
                      +.++|+||+|+++|++++ |..||...........+ ........+...+..+.+++.+||..+|++||++.++++.|++
T Consensus       191 ~~~~Dv~slG~il~ellt~g~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~  269 (269)
T cd05044         191 TTQSDVWSFGVLMWEILTLGQQPYPALNNQEVLQHV-TAGGRLQKPENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQN  269 (269)
T ss_pred             ccchhHHHHHHHHHHHHHcCCCCCcccCHHHHHHHH-hcCCccCCcccchHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence            588999999999999998 99999776655443333 2333444566678899999999999999999999999998863

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=99.93  E-value=1.8e-25  Score=150.99  Aligned_cols=140  Identities=19%  Similarity=0.211  Sum_probs=106.4

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc-------CCcccCCcccCccccccCC--CCCCcchh
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ-------RGRCYYPAWMSPEALQKKP--GDRNLEAC   75 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~-------~~~~~~~~~~~pe~~~~~~--~~~~~~~~   75 (153)
                      ..-+..|||++++.|+|+.+.||+++.++.+++.  |||.+...       ....++..|++||.+....  ...++.++
T Consensus       130 i~~al~~LH~~~ivH~dl~~~nili~~~~~~~l~--dfg~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~  207 (282)
T cd06636         130 ILRGLAHLHAHKVIHRDIKGQNVLLTENAEVKLV--DFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDYRS  207 (282)
T ss_pred             HHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEe--eCcchhhhhccccCCCcccccccccCHhhcCcccCcCcCCCccc
Confidence            3456789999999999999999999999988887  99987432       1235678899999875321  22355789


Q ss_pred             hHHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581         76 DMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus        76 dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      |+||+|+++|++++|..||.........................+..+.+++.+||+.+|.+||++.++++
T Consensus       208 DvwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~  278 (282)
T cd06636         208 DIWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPPPKLKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLK  278 (282)
T ss_pred             chhHHHHHHHHHHhCCCCccccCHHhhhhhHhhCCCCCCcccccCHHHHHHHHHHhCCChhhCcCHHHHhc
Confidence            99999999999999999997665444333222221111223357889999999999999999999999875

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=99.93  E-value=4.5e-25  Score=148.58  Aligned_cols=140  Identities=26%  Similarity=0.452  Sum_probs=110.7

Q ss_pred             hhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc--------CCcccCCcccCccccccCCCCCCcchhhH
Q psy12581          6 IVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ--------RGRCYYPAWMSPEALQKKPGDRNLEACDM   77 (153)
Q Consensus         6 ~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~--------~~~~~~~~~~~pe~~~~~~~~~~~~~~dv   77 (153)
                      .-++.|||+.++.|+||.+.||+++.++.+++.  |||++...        ....++..|++||.+.+.   ..+.++|+
T Consensus       127 ~~~l~~LH~~~i~H~dlkp~Nili~~~~~~~l~--~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~---~~~~~~Di  201 (275)
T cd05046         127 ALGMDHLSNARFVHRDLAARNCLVSSQREVKVS--LLSLSKDVYNSEYYKLRNALIPLRWLAPEAVQED---DFSTKSDV  201 (275)
T ss_pred             HHHHHHhhhcCcccCcCccceEEEeCCCcEEEc--ccccccccCcccccccCCceeEEeecChhhhccC---CCCchhhH
Confidence            346789999999999999999999999988888  99886322        222445679999988754   34478999


Q ss_pred             HHHHHHHHHHHh-CCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHhh
Q psy12581         78 WSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDK  150 (153)
Q Consensus        78 ~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~~  150 (153)
                      ||+|++++++++ |..||.....................+...+..+.+++.+||+.+|++||++.++++.|.+
T Consensus       202 ~slG~~l~~l~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~~  275 (275)
T cd05046         202 WSFGVLMWEVFTQGELPFYGLSDEEVLNRLQAGKLELPVPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALGE  275 (275)
T ss_pred             HHHHHHHHHHHhCCCCCccccchHHHHHHHHcCCcCCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhcC
Confidence            999999999998 8889877665554444433333444566788999999999999999999999999998863

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=99.93  E-value=2e-25  Score=150.79  Aligned_cols=136  Identities=21%  Similarity=0.233  Sum_probs=104.9

Q ss_pred             hhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc-------CCcccCCcccCccccccCCCCCCcchhhHH
Q psy12581          6 IVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ-------RGRCYYPAWMSPEALQKKPGDRNLEACDMW   78 (153)
Q Consensus         6 ~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~-------~~~~~~~~~~~pe~~~~~~~~~~~~~~dv~   78 (153)
                      .-++.|||++++.|+||.+.||+++.++.+++.  |||.+...       ....+++.|++||.+.+.   .++.++|+|
T Consensus       107 ~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~--dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~---~~~~~~Dvw  181 (280)
T cd05608         107 ISGLEHLHQRRIIYRDLKPENVLLDNDGNVRIS--DLGLAVELKDGQSKTKGYAGTPGFMAPELLQGE---EYDFSVDYF  181 (280)
T ss_pred             HHHHHHHHHCCcccCCCCHHHEEECCCCCEEEe--eCccceecCCCCccccccCCCcCccCHHHhcCC---CCCccccHH
Confidence            456789999999999999999999999988888  99987432       123678899999998864   345789999


Q ss_pred             HHHHHHHHHHhCCCCCCCCCchhhhHHHHhh--ccccCCCCCCCHHHHHHHHHHhcCCCCCCC-----CHHHHHH
Q psy12581         79 SFAVLLWELATREVPFADLTPMEVGMKVALE--GLRITIPPGISSHLSKLIRICMNEDPGKRP-----TFDMVLP  146 (153)
Q Consensus        79 s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----s~~~~l~  146 (153)
                      |+|+++|++++|+.||...............  ......+...+..+.+++.+||+.||++||     +++++++
T Consensus       182 slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~  256 (280)
T cd05608         182 ALGVTLYEMIAARGPFRARGEKVENKELKQRILNDSVTYPDKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRT  256 (280)
T ss_pred             HHHHHHHHHHhCCCCCCCCCcchhHHHHHHhhcccCCCCcccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhc
Confidence            9999999999999999764332211111111  112344566889999999999999999999     6677764

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=99.93  E-value=4.1e-25  Score=147.26  Aligned_cols=140  Identities=28%  Similarity=0.443  Sum_probs=111.3

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccccC----CcccCCcccCccccccCCCCCCcchhhHHHH
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQR----GRCYYPAWMSPEALQKKPGDRNLEACDMWSF   80 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~----~~~~~~~~~~pe~~~~~~~~~~~~~~dv~s~   80 (153)
                      ..-+..|||++++.|+||.+.||+++.++.+++.  |||.+....    ....+..|++||.+.+.   .++.++|+||+
T Consensus       109 i~~al~~lH~~~~~H~dl~p~nili~~~~~~kl~--Dfg~~~~~~~~~~~~~~~~~y~~pe~~~~~---~~~~~~Dv~sl  183 (254)
T cd05083         109 VAEGMEYLESKKLVHRDLAARNILVSEDGVAKVS--DFGLARVGSMGVDNSKLPVKWTAPEALKHK---KFSSKSDVWSY  183 (254)
T ss_pred             HHHHHHHHHhCCeeccccCcceEEEcCCCcEEEC--CCccceeccccCCCCCCCceecCHHHhccC---CcCchhhHHHH
Confidence            3456789999999999999999999999988887  999874322    22334579999988653   45578999999


Q ss_pred             HHHHHHHHh-CCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHhh
Q psy12581         81 AVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDK  150 (153)
Q Consensus        81 g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~~  150 (153)
                      |++++++++ |..||........... ...+.....+...+..+.+++.+||..+|+.||+++++++.|++
T Consensus       184 G~~l~el~~~g~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~  253 (254)
T cd05083         184 GVLLWEVFSYGRAPYPKMSLKEVKEC-VEKGYRMEPPEGCPADVYVLMTSCWETEPKKRPSFHKLREKLEK  253 (254)
T ss_pred             HHHHHHHHhCCCCCCccCCHHHHHHH-HhCCCCCCCCCcCCHHHHHHHHHHcCCChhhCcCHHHHHHHHcc
Confidence            999999997 9999987665544333 33444445566788999999999999999999999999998864

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>KOG0600|consensus

Probab=99.93  E-value=9e-26  Score=156.62  Aligned_cols=136  Identities=21%  Similarity=0.133  Sum_probs=112.4

Q ss_pred             hHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccc--------ccCCcccCCcccCccccccCCCCCCcchhhHH
Q psy12581          7 VYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSF--------QQRGRCYYPAWMSPEALQKKPGDRNLEACDMW   78 (153)
Q Consensus         7 ~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~--------~~~~~~~~~~~~~pe~~~~~~~~~~~~~~dv~   78 (153)
                      -.++|+|+++|.|+||+.+||+||.+|.+||.  |||++.        ..++...|.+|.+||.+.+..  .++...|+|
T Consensus       229 ~Gl~~cH~~gvlHRDIK~SNiLidn~G~LKia--DFGLAr~y~~~~~~~~T~rVvTLWYRpPELLLG~t--~Yg~aVDlW  304 (560)
T KOG0600|consen  229 EGLEYCHSRGVLHRDIKGSNILIDNNGVLKIA--DFGLARFYTPSGSAPYTSRVVTLWYRPPELLLGAT--SYGTAVDLW  304 (560)
T ss_pred             HHHHHHhhcCeeeccccccceEEcCCCCEEec--cccceeeccCCCCcccccceEEeeccChHHhcCCc--ccccceeeh
Confidence            35789999999999999999999999999999  999994        235567789999999998853  567899999


Q ss_pred             HHHHHHHHHHhCCCCCCCCCchhhhHHHHhhcccc--------CCC-------------------CCCCHHHHHHHHHHh
Q psy12581         79 SFAVLLWELATREVPFADLTPMEVGMKVALEGLRI--------TIP-------------------PGISSHLSKLIRICM  131 (153)
Q Consensus        79 s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~--------~~~-------------------~~~~~~~~~l~~~cl  131 (153)
                      |.||++.|+++|++.+.+..+.+++.++..-...+        ..|                   ..++....+++..+|
T Consensus       305 S~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~~~kLP~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL  384 (560)
T KOG0600|consen  305 SVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWPVSKLPHATIFKPQQPYKRRLRETFKDFPASALDLLEKLL  384 (560)
T ss_pred             hhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhccccccCCcccccCCCCcccchHHHHhccCCHHHHHHHHHHh
Confidence            99999999999999999988888877654321111        011                   234678899999999


Q ss_pred             cCCCCCCCCHHHHHH
Q psy12581        132 NEDPGKRPTFDMVLP  146 (153)
Q Consensus       132 ~~~p~~Rps~~~~l~  146 (153)
                      ..||++|.|+.++++
T Consensus       385 ~ldP~kR~tA~~aL~  399 (560)
T KOG0600|consen  385 SLDPDKRGTASSALQ  399 (560)
T ss_pred             ccCccccccHHHHhc
Confidence            999999999998874

>KOG0200|consensus

Probab=99.93  E-value=4.2e-25  Score=162.38  Aligned_cols=142  Identities=27%  Similarity=0.456  Sum_probs=119.7

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc--------CCcc--cCCcccCccccccCCCCCCcch
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ--------RGRC--YYPAWMSPEALQKKPGDRNLEA   74 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~--------~~~~--~~~~~~~pe~~~~~~~~~~~~~   74 (153)
                      .+...+||+++.++|+|+..+||++..+..+|++  |||++..-        ....  -...|||||.+...   .++.+
T Consensus       427 Ia~GMe~L~~~~~vHRDLAaRNVLi~~~~~~kIa--DFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~---~ft~k  501 (609)
T KOG0200|consen  427 IANGMEYLASVPCVHRDLAARNVLITKNKVIKIA--DFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDR---VFTSK  501 (609)
T ss_pred             HHHHHHHHhhCCccchhhhhhhEEecCCCEEEEc--cccceeccCCCCceEecCCCCccceeecCHHHhccC---ccccc
Confidence            3456789999999999999999999999999999  99999531        1111  23469999999863   56689


Q ss_pred             hhHHHHHHHHHHHHh-CCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHhhh
Q psy12581         75 CDMWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKM  151 (153)
Q Consensus        75 ~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~~~  151 (153)
                      +||||||+++||+++ |..||.+........+.+..+.++..|..++.++.++|+.||+.+|++||++.++.+.|+++
T Consensus       502 SDVWSfGI~L~EifsLG~~PYp~~~~~~~l~~~l~~G~r~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~~  579 (609)
T KOG0200|consen  502 SDVWSFGILLWEIFTLGGTPYPGIPPTEELLEFLKEGNRMEQPEHCSDEIYDLMKSCWNADPEDRPTFSECVEFFEKH  579 (609)
T ss_pred             chhhHHHHHHHHHhhCCCCCCCCCCcHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHHH
Confidence            999999999999998 89999886533333556778889999999999999999999999999999999999999874

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=99.93  E-value=3.1e-25  Score=149.18  Aligned_cols=142  Identities=23%  Similarity=0.397  Sum_probs=111.5

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccccC---------CcccCCcccCccccccCCCCCCcchh
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQR---------GRCYYPAWMSPEALQKKPGDRNLEAC   75 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~---------~~~~~~~~~~pe~~~~~~~~~~~~~~   75 (153)
                      ..-++.|||++++.|+||.+.||+++.++.+++.  |||.+....         ...+++.|++||.+...   ..+.++
T Consensus       122 i~~~l~~lH~~~i~H~dikp~nili~~~~~~kl~--dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~---~~~~~s  196 (273)
T cd05074         122 IASGMEYLSSKNFIHRDLAARNCMLNENMTVCVA--DFGLSKKIYSGDYYRQGCASKLPVKWLALESLADN---VYTTHS  196 (273)
T ss_pred             HHHHHHHHHhCCEeecccchhhEEEcCCCCEEEC--cccccccccCCcceecCCCccCchhhcCHhHHhcC---ccchhh
Confidence            3456799999999999999999999999988888  999874321         12334678999987653   345789


Q ss_pred             hHHHHHHHHHHHHh-CCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHhhhh
Q psy12581         76 DMWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKMK  152 (153)
Q Consensus        76 dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~~~~  152 (153)
                      |+||+|+++|++++ |..||.+.........+. .......+...+..+.+++.+||..+|+.||++.++++.|+++.
T Consensus       197 Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~~  273 (273)
T cd05074         197 DVWAFGVTMWEIMTRGQTPYAGVENSEIYNYLI-KGNRLKQPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELIW  273 (273)
T ss_pred             hhHHHHHHHHHHhhCCCCCCCCCCHHHHHHHHH-cCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhhC
Confidence            99999999999998 889987766544433332 33333445567889999999999999999999999999998763

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=99.93  E-value=5.2e-25  Score=147.24  Aligned_cols=141  Identities=22%  Similarity=0.394  Sum_probs=112.0

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccccC--------CcccCCcccCccccccCCCCCCcchhh
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQR--------GRCYYPAWMSPEALQKKPGDRNLEACD   76 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~--------~~~~~~~~~~pe~~~~~~~~~~~~~~d   76 (153)
                      -.-++.|||++++.|+||.+.||+++.++.+++.  |||.+....        ...++..|++||.+...   ..+.++|
T Consensus       111 l~~aL~~lH~~~i~H~dl~p~ni~i~~~~~~~l~--d~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~---~~~~~~D  185 (260)
T cd05073         111 IAEGMAFIEQRNYIHRDLRAANILVSASLVCKIA--DFGLARVIEDNEYTAREGAKFPIKWTAPEAINFG---SFTIKSD  185 (260)
T ss_pred             HHHHHHHHHhCCccccccCcceEEEcCCCcEEEC--CCcceeeccCCCcccccCCcccccccCHhHhccC---CcCcccc
Confidence            4557799999999999999999999999988888  999874321        11234569999998753   3457899


Q ss_pred             HHHHHHHHHHHHh-CCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHhhh
Q psy12581         77 MWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKM  151 (153)
Q Consensus        77 v~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~~~  151 (153)
                      +||+|++++++++ |..||.+......... .......+.+...+..+.+++.+||+.+|++||++.++++.|+.+
T Consensus       186 i~slG~~l~~l~t~g~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~~  260 (260)
T cd05073         186 VWSFGILLMEIVTYGRIPYPGMSNPEVIRA-LERGYRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDF  260 (260)
T ss_pred             chHHHHHHHHHHhcCCCCCCCCCHHHHHHH-HhCCCCCCCcccCCHHHHHHHHHHcccCcccCcCHHHHHHHHhcC
Confidence            9999999999998 8999987665544333 233334455667888999999999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=99.93  E-value=4.7e-25  Score=151.40  Aligned_cols=142  Identities=19%  Similarity=0.246  Sum_probs=111.3

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc---CCcccCCcccCccccccCCCCCCcchhhHHHHH
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ---RGRCYYPAWMSPEALQKKPGDRNLEACDMWSFA   81 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~---~~~~~~~~~~~pe~~~~~~~~~~~~~~dv~s~g   81 (153)
                      .+-+..|||++++.|+|+.+.||+++.++.+++.  |||.+...   ....++..|++||.+........+.++|+||+|
T Consensus       134 i~~~l~~lH~~~i~H~dL~p~Nil~~~~~~~kl~--dfg~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slG  211 (317)
T cd06635         134 ALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLA--DFGSASIASPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLG  211 (317)
T ss_pred             HHHHHHHHHHCCcccCCCCcccEEECCCCCEEEe--cCCCccccCCcccccCCccccChhhhhcCCCCCCCccccHHHHH
Confidence            3456789999999999999999999999988888  99987432   234677889999997532223456789999999


Q ss_pred             HHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHH
Q psy12581         82 VLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPIL  148 (153)
Q Consensus        82 ~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L  148 (153)
                      ++++++++|..||...........+.........+..++..+.+++.+||+.+|.+||++.++++.+
T Consensus       212 vil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~  278 (317)
T cd06635         212 ITCIELAERKPPLFNMNAMSALYHIAQNESPTLQSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHM  278 (317)
T ss_pred             HHHHHHHhCCCCCCCccHHHHHHHHHhccCCCCCCccccHHHHHHHHHHccCCcccCcCHHHHHhCh
Confidence            9999999999998776555444444433333333455788999999999999999999999998754

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>PTZ00284 protein kinase; Provisional

Probab=99.93  E-value=9.7e-26  Score=161.95  Aligned_cols=137  Identities=18%  Similarity=0.105  Sum_probs=100.6

Q ss_pred             hhhHHhhhhc-CCCCCCCeeeeeeeeccccc----------------hhhccccccccccc----CCcccCCcccCcccc
Q psy12581          5 KIVYSFYLNS-KKSKTSNAFLFCCQIDEDLT----------------ARINMADAQFSFQQ----RGRCYYPAWMSPEAL   63 (153)
Q Consensus         5 ~~~~~~~lh~-~~i~~~ni~~~~~~~~~~~~----------------~kl~~~d~g~~~~~----~~~~~~~~~~~pe~~   63 (153)
                      ...++.|||+ .+|+|+||++.||+++.++.                +||.  |||.+...    ....||+.|++||.+
T Consensus       240 i~~aL~yLH~~~gIiHrDlKP~NILl~~~~~~~~~~~~~~~~~~~~~vkl~--DfG~~~~~~~~~~~~~gt~~Y~APE~~  317 (467)
T PTZ00284        240 TGVALDYFHTELHLMHTDLKPENILMETSDTVVDPVTNRALPPDPCRVRIC--DLGGCCDERHSRTAIVSTRHYRSPEVV  317 (467)
T ss_pred             HHHHHHHHHhcCCeecCCCCHHHEEEecCCcccccccccccCCCCceEEEC--CCCccccCccccccccCCccccCcHHh
Confidence            4567899997 59999999999999987663                4555  99987432    335789999999999


Q ss_pred             ccCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhcc-------------------------ccCC-C-
Q psy12581         64 QKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGL-------------------------RITI-P-  116 (153)
Q Consensus        64 ~~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~-------------------------~~~~-~-  116 (153)
                      .+.   .++.++|+||+|+++||+++|+.||.+.........+.....                         .+.. + 
T Consensus       318 ~~~---~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  394 (467)
T PTZ00284        318 LGL---GWMYSTDMWSMGCIIYELYTGKLLYDTHDNLEHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPK  394 (467)
T ss_pred             hcC---CCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHH
Confidence            864   345889999999999999999999977654333222111000                         0000 0 


Q ss_pred             -------------CCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581        117 -------------PGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus       117 -------------~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                                   ......+.+|+.+||+.||++|||++++++
T Consensus       395 ~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ta~e~L~  437 (467)
T PTZ00284        395 HLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRLNARQMTT  437 (467)
T ss_pred             HHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCCCHHHHhc
Confidence                         011345779999999999999999999986

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=99.92  E-value=9.3e-26  Score=152.24  Aligned_cols=137  Identities=14%  Similarity=0.178  Sum_probs=103.9

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccccC------CcccCCcccCccccccCCCCCCcchhhHH
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQR------GRCYYPAWMSPEALQKKPGDRNLEACDMW   78 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~------~~~~~~~~~~pe~~~~~~~~~~~~~~dv~   78 (153)
                      ..-++.|||++++.|+||.+.||+++.++.+++.  |||++....      ...++..|++||.+.+.   .++.++|+|
T Consensus       104 i~~al~~lH~~~ivH~dikp~Nili~~~~~~~l~--Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Dvw  178 (277)
T cd05607         104 ITCGILHLHSMDIVYRDMKPENVLLDDQGNCRLS--DLGLAVELKDGKTITQRAGTNGYMAPEILKEE---PYSYPVDWF  178 (277)
T ss_pred             HHHHHHHHHHCCEEEccCChHhEEEcCCCCEEEe--eceeeeecCCCceeeccCCCCCccCHHHHccC---CCCCchhHH
Confidence            4456799999999999999999999999988888  999874332      23678899999998764   355889999


Q ss_pred             HHHHHHHHHHhCCCCCCCCCchhhhHHHHhhcc--ccC-CCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581         79 SFAVLLWELATREVPFADLTPMEVGMKVALEGL--RIT-IPPGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus        79 s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      |+|+++|++++|..||...........+.....  ... .....+.++.+++.+||+.||++||+++++++
T Consensus       179 slGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~  249 (277)
T cd05607         179 AMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTLEDEVKFEHQNFTEESKDICRLFLAKKPEDRLGSREKND  249 (277)
T ss_pred             HHHHHHHHHHhCCCCCCCCcchhhHHHHHHHhhccccccccccCCHHHHHHHHHHhccCHhhCCCCccchh
Confidence            999999999999999976433211111111111  111 12357889999999999999999999976553

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=99.92  E-value=4.7e-25  Score=150.00  Aligned_cols=141  Identities=25%  Similarity=0.339  Sum_probs=107.2

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccccC---------CcccCCcccCccccccCCCCCCcchh
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQR---------GRCYYPAWMSPEALQKKPGDRNLEAC   75 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~---------~~~~~~~~~~pe~~~~~~~~~~~~~~   75 (153)
                      .+-+..|||++++.|+||.+.||+++.++.+|+.  |||++....         ...++..|++||.+...   ..+.++
T Consensus       138 i~~al~~lH~~~i~H~dlkp~Nill~~~~~~kl~--dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~  212 (295)
T cd05097         138 IASGMKYLASLNFVHRDLATRNCLVGNHYTIKIA--DFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLG---KFTTAS  212 (295)
T ss_pred             HHHHHHHHHhcCeeccccChhhEEEcCCCcEEec--ccccccccccCcceeccCcCcCceeecChhhhccC---CcCchh
Confidence            4456789999999999999999999999888888  999874321         12335689999987653   356899


Q ss_pred             hHHHHHHHHHHHHh--CCCCCCCCCchhhhHHHHh------hccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHH
Q psy12581         76 DMWSFAVLLWELAT--REVPFADLTPMEVGMKVAL------EGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPI  147 (153)
Q Consensus        76 dv~s~g~~~~~~~~--g~~p~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~  147 (153)
                      |+||+|++++++++  +..||..............      .......+...+..+.+++.+||+.+|++||++.++++.
T Consensus       213 DvwSlG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~  292 (295)
T cd05097         213 DVWAFGVTLWEMFTLCKEQPYSLLSDEQVIENTGEFFRNQGRQIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHHF  292 (295)
T ss_pred             hHHHHHHHHHHHHHcCCCCCCcccChHHHHHHHHHhhhhccccccCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHH
Confidence            99999999999987  6678776554443322211      111223345577899999999999999999999999998


Q ss_pred             Hhh
Q psy12581        148 LDK  150 (153)
Q Consensus       148 L~~  150 (153)
                      |++
T Consensus       293 l~~  295 (295)
T cd05097         293 LRE  295 (295)
T ss_pred             HhC
Confidence            863

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=99.92  E-value=3.6e-25  Score=151.42  Aligned_cols=140  Identities=19%  Similarity=0.245  Sum_probs=108.3

Q ss_pred             hhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc---CCcccCCcccCccccccCCCCCCcchhhHHHHHH
Q psy12581          6 IVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ---RGRCYYPAWMSPEALQKKPGDRNLEACDMWSFAV   82 (153)
Q Consensus         6 ~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~---~~~~~~~~~~~pe~~~~~~~~~~~~~~dv~s~g~   82 (153)
                      .-+..|||++++.|+||.+.||+++.++.+++.  |||++...   ....++..|++||.+.+......+.++|+||+|+
T Consensus       125 ~~~l~~LH~~~i~H~dl~p~nil~~~~~~~kl~--dfg~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~  202 (308)
T cd06634         125 LQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLG--DFGSASIMAPANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGI  202 (308)
T ss_pred             HHHHHHHHhCCcccCCCCHHhEEECCCCcEEEC--CcccceeecCcccccCCccccCHHHHhhcccCCCCcccchHHHHH
Confidence            346789999999999999999999999988888  99987432   2345778999999975322233557899999999


Q ss_pred             HHHHHHhCCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHH
Q psy12581         83 LLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPI  147 (153)
Q Consensus        83 ~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~  147 (153)
                      +++++++|..||.....................+...+..+.+++.+||..+|++||++++++..
T Consensus       203 il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~  267 (308)
T cd06634         203 TCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKH  267 (308)
T ss_pred             HHHHHHcCCCCCccccHHHHHHHHhhcCCCCcCcccccHHHHHHHHHHhhCCcccCCCHHHHhhC
Confidence            99999999999877654444433332222222244578889999999999999999999998864

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=99.92  E-value=4.9e-25  Score=148.03  Aligned_cols=143  Identities=22%  Similarity=0.384  Sum_probs=106.6

Q ss_pred             chhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc---------CCcccCCcccCccccccCCC----CC
Q psy12581          4 KKIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ---------RGRCYYPAWMSPEALQKKPG----DR   70 (153)
Q Consensus         4 ~~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~---------~~~~~~~~~~~pe~~~~~~~----~~   70 (153)
                      ..+-+..|||++++.|+||.+.||+++.++.+++.  |||.+...         ....++..|++||.+.....    ..
T Consensus       108 qi~~al~~lH~~~i~H~dlkp~nil~~~~~~~kL~--dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~  185 (269)
T cd05087         108 EIALGLLHLHKNNFIHSDLALRNCLLTADLTVKIG--DYGLSHNKYKEDYYVTPDQLWVPLRWIAPELVDEVHGNLLVVD  185 (269)
T ss_pred             HHHHHHHHHHHCCEeccccCcceEEEcCCCcEEEC--CccccccccCcceeecCCCcCCcccccCHhHhccccccccccC
Confidence            34567799999999999999999999999988888  99987322         12245677999998864211    12


Q ss_pred             CcchhhHHHHHHHHHHHHh-CCCCCCCCCchhhhHHHHhhc-cccCC---CCCCCHHHHHHHHHHhcCCCCCCCCHHHHH
Q psy12581         71 NLEACDMWSFAVLLWELAT-REVPFADLTPMEVGMKVALEG-LRITI---PPGISSHLSKLIRICMNEDPGKRPTFDMVL  145 (153)
Q Consensus        71 ~~~~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~-~~~~~---~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l  145 (153)
                      .+.++|+||+|++++++++ |..||................ ...+.   ....+..+.+++.+|| .+|++|||+++++
T Consensus       186 ~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~  264 (269)
T cd05087         186 QTKESNVWSLGVTIWELFELGSQPYRHLSDEQVLTYTVREQQLKLPKPRLKLPLSDRWYEVMQFCW-LQPEQRPSAEEVH  264 (269)
T ss_pred             CCccchhHHHHHHHHHHHhCCCCCCCCCChHHHHHHHhhcccCCCCCCccCCCCChHHHHHHHHHh-cCcccCCCHHHHH
Confidence            4578999999999999996 999997766554433322221 11221   2245778999999999 5899999999999


Q ss_pred             HHHh
Q psy12581        146 PILD  149 (153)
Q Consensus       146 ~~L~  149 (153)
                      ..|+
T Consensus       265 ~~l~  268 (269)
T cd05087         265 LLLS  268 (269)
T ss_pred             HHhc
Confidence            8875

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=99.92  E-value=6e-25  Score=149.61  Aligned_cols=136  Identities=20%  Similarity=0.334  Sum_probs=107.9

Q ss_pred             hhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc-------CCcccCCcccCccccccCCCCCCcchhhHH
Q psy12581          6 IVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ-------RGRCYYPAWMSPEALQKKPGDRNLEACDMW   78 (153)
Q Consensus         6 ~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~-------~~~~~~~~~~~pe~~~~~~~~~~~~~~dv~   78 (153)
                      .-++.|||++++.|+||.++||+++.++.+++.  |||++...       ....++..|++||.+.+.   .++.++|+|
T Consensus       125 ~~al~~LH~~~i~H~dL~p~Nili~~~~~~kl~--dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Dv~  199 (296)
T cd06655         125 LQALEFLHANQVIHRDIKSDNVLLGMDGSVKLT--DFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRK---AYGPKVDIW  199 (296)
T ss_pred             HHHHHHHHHCCcccCCCCHHHEEECCCCCEEEc--cCccchhcccccccCCCcCCCccccCcchhcCC---CCCchhhHH
Confidence            346789999999999999999999999988888  99987432       123567789999998754   345789999


Q ss_pred             HHHHHHHHHHhCCCCCCCCCchhhhHHHHhhc-cccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581         79 SFAVLLWELATREVPFADLTPMEVGMKVALEG-LRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus        79 s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      |+|+++|++++|..||...........+.... .....+...+..+.+++.+||..+|++||++.++++
T Consensus       200 slGvil~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~  268 (296)
T cd06655         200 SLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQ  268 (296)
T ss_pred             HHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCcccCCcccCCHHHHHHHHHHhhcChhhCCCHHHHhh
Confidence            99999999999999998766544433332222 123345667889999999999999999999999874

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=99.92  E-value=5.1e-25  Score=146.47  Aligned_cols=138  Identities=25%  Similarity=0.445  Sum_probs=109.4

Q ss_pred             hhHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccccC---------CcccCCcccCccccccCCCCCCcchhh
Q psy12581          6 IVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQR---------GRCYYPAWMSPEALQKKPGDRNLEACD   76 (153)
Q Consensus         6 ~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~---------~~~~~~~~~~pe~~~~~~~~~~~~~~d   76 (153)
                      .-++.|||++++.|+||.++||+++.++.+++.  |||.+....         ....+..|++||.+.+.   ..+.++|
T Consensus       103 ~~~l~~lH~~~i~h~di~p~nili~~~~~~~l~--d~g~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~---~~~~~~D  177 (251)
T cd05041         103 AAGMEYLESKNCIHRDLAARNCLVGENNVLKIS--DFGMSREEEGGIYTVSDGLKQIPIKWTAPEALNYG---RYTSESD  177 (251)
T ss_pred             HHHHHHHHhCCEehhhcCcceEEEcCCCcEEEe--eccccccccCCcceeccccCcceeccCChHhhccC---CCCcchh
Confidence            346789999999999999999999999988888  999874332         11224569999988653   3457899


Q ss_pred             HHHHHHHHHHHHh-CCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHh
Q psy12581         77 MWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILD  149 (153)
Q Consensus        77 v~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~  149 (153)
                      +||+|++++++++ |..||........... .........+...+..+.+++.+||..+|++||+++++++.|+
T Consensus       178 i~slG~i~~~l~t~~~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~ell~~l~  250 (251)
T cd05041         178 VWSYGILLWETFSLGDTPYPGMSNQQTRER-IESGYRMPAPQLCPEEIYRLMLQCWAYDPENRPSFSEIYNELQ  250 (251)
T ss_pred             HHHHHHHHHHHHhccCCCCccCCHHHHHHH-HhcCCCCCCCccCCHHHHHHHHHHhccChhhCcCHHHHHHHhh
Confidence            9999999999998 8888877665443333 3333344456678899999999999999999999999999886

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=99.92  E-value=4.1e-25  Score=148.12  Aligned_cols=136  Identities=24%  Similarity=0.312  Sum_probs=108.7

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccccC-------------CcccCCcccCccccccCCCCCC
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQR-------------GRCYYPAWMSPEALQKKPGDRN   71 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~-------------~~~~~~~~~~pe~~~~~~~~~~   71 (153)
                      ..-+..|||+.++.|+||.++||+++.++.+++.  |||.+....             ...++..|++||.+.+.   .+
T Consensus       115 l~~~l~~lH~~~ivH~di~p~nil~~~~~~~~l~--dfg~~~~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~---~~  189 (267)
T cd06628         115 ILKGLNYLHNRGIIHRDIKGANILVDNKGGIKIS--DFGISKKLEANSLSTKTNGARPSLQGSVFWMAPEVVKQT---SY  189 (267)
T ss_pred             HHHHHHHHHhcCcccccCCHHHEEEcCCCCEEec--ccCCCcccccccccCCccccccccCCCcCccChhHhccC---CC
Confidence            3456789999999999999999999999988888  999874332             12466789999988753   34


Q ss_pred             cchhhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581         72 LEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus        72 ~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      +.++|+|++|++++++++|+.||.+........... ....+..+...+..+.+++++||+.+|++||++.++++
T Consensus       190 ~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~  263 (267)
T cd06628         190 TRKADIWSLGCLVVEMLTGKHPFPDCTQLQAIFKIG-ENASPEIPSNISSEAIDFLEKTFEIDHNKRPTAAELLK  263 (267)
T ss_pred             CchhhhHHHHHHHHHHhhCCCCCCCccHHHHHHHHh-ccCCCcCCcccCHHHHHHHHHHccCCchhCcCHHHHhh
Confidence            578999999999999999999998765444333222 33345566778899999999999999999999999875

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>smart00750 KIND kinase non-catalytic C-lobe domain

Probab=99.92  E-value=8.5e-25  Score=138.45  Aligned_cols=135  Identities=18%  Similarity=0.305  Sum_probs=96.5

Q ss_pred             chhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc--CCcccCCcccCccccccCCCCCCcchhhHHHHH
Q psy12581          4 KKIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ--RGRCYYPAWMSPEALQKKPGDRNLEACDMWSFA   81 (153)
Q Consensus         4 ~~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~--~~~~~~~~~~~pe~~~~~~~~~~~~~~dv~s~g   81 (153)
                      ...-++.|||+++ +++||+     ++.++.+++    ||.+...  ....+++.|+|||.+.+.   .++.++||||+|
T Consensus        25 qi~~~L~~lH~~~-kp~Nil-----~~~~~~~~~----fG~~~~~~~~~~~g~~~y~aPE~~~~~---~~~~~~DiwSlG   91 (176)
T smart00750       25 QCLRALRELHRQA-KSGNIL-----LTWDGLLKL----DGSVAFKTPEQSRVDPYFMAPEVIQGQ---SYTEKADIYSLG   91 (176)
T ss_pred             HHHHHHHHHHhcC-CcccEe-----EcCccceee----ccceEeeccccCCCcccccChHHhcCC---CCcchhhHHHHH
Confidence            4456789999998 777775     488876666    7776332  234688999999999864   345789999999


Q ss_pred             HHHHHHHhCCCCCCCCCchhhhHHHHhhccccC------CCCCCCH--HHHHHHHHHhcCCCCCCCCHHHHHHHHhhh
Q psy12581         82 VLLWELATREVPFADLTPMEVGMKVALEGLRIT------IPPGISS--HLSKLIRICMNEDPGKRPTFDMVLPILDKM  151 (153)
Q Consensus        82 ~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~------~~~~~~~--~~~~l~~~cl~~~p~~Rps~~~~l~~L~~~  151 (153)
                      +++|++++|+.||....................      .+...+.  .+.+++.+||..+|++||++.++++.+..+
T Consensus        92 ~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~  169 (176)
T smart00750       92 ITLYEALDYELPYNEERELSAILEILLNGMPADDPRDRSNLESVSAARSFADFMRVCASRLPQRREAANHYLAHCRAL  169 (176)
T ss_pred             HHHHHHHhCCCCccccchhcHHHHHHHHHhccCCccccccHHHHHhhhhHHHHHHHHHhcccccccCHHHHHHHHHHH
Confidence            999999999999976543332222222211111      1112223  689999999999999999999999887654

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=99.92  E-value=5.3e-25  Score=147.77  Aligned_cols=140  Identities=19%  Similarity=0.276  Sum_probs=110.4

Q ss_pred             hhhHHhhhhc-CCCCCCCeeeeeeeeccccchhhcccccccccccC------CcccCCcccCccccccCCCCCCcchhhH
Q psy12581          5 KIVYSFYLNS-KKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQR------GRCYYPAWMSPEALQKKPGDRNLEACDM   77 (153)
Q Consensus         5 ~~~~~~~lh~-~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~------~~~~~~~~~~pe~~~~~~~~~~~~~~dv   77 (153)
                      .+-++.|||+ +++.|+||.+.||+++.++.+++.  |||.+....      ...++..|++||.+.+.   .++.++|+
T Consensus       122 l~~~l~~lh~~~~i~H~dl~~~nil~~~~~~~~l~--dfg~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~---~~~~~~Dv  196 (269)
T cd08528         122 MVLALRYLHKEKRIVHRDLTPNNIMLGEDDKVTIT--DFGLAKQKQPESKLTSVVGTILYSCPEIVKNE---PYGEKADV  196 (269)
T ss_pred             HHHHHHHhccCCceeecCCCHHHEEECCCCcEEEe--cccceeecccccccccccCcccCcChhhhcCC---CCchHHHH
Confidence            3456789995 789999999999999999988888  999884322      33567789999998753   35689999


Q ss_pred             HHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHh
Q psy12581         78 WSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILD  149 (153)
Q Consensus        78 ~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~  149 (153)
                      ||+|+++|++++|..||..................+......+..+.+++.+||+.||++||++.++.+++.
T Consensus       197 ~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~  268 (269)
T cd08528         197 WAFGCILYQMCTLQPPFYSTNMLSLATKIVEAVYEPLPEGMYSEDVTDVITSCLTPDAEARPDIIQVSAMIS  268 (269)
T ss_pred             HHHHHHHHHHHhCCCcccccCHHHHHHHHhhccCCcCCcccCCHHHHHHHHHHCCCCCccCCCHHHHHHHhc
Confidence            999999999999999997766554443333222222222357889999999999999999999999998875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=99.92  E-value=5.5e-25  Score=147.76  Aligned_cols=141  Identities=23%  Similarity=0.412  Sum_probs=111.2

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccccCCc---------c---cCCcccCccccccCCCCCCc
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQRGR---------C---YYPAWMSPEALQKKPGDRNL   72 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~~~---------~---~~~~~~~pe~~~~~~~~~~~   72 (153)
                      .+-++.|||++++.|+||.+.||+++.++.+++.  |||.+......         .   .+..|++||.+.+.   .++
T Consensus       115 l~~al~~lH~~g~~H~dl~p~nili~~~~~~kl~--dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~---~~~  189 (269)
T cd05065         115 IAAGMKYLSEMNYVHRDLAARNILVNSNLVCKVS--DFGLSRFLEDDTSDPTYTSSLGGKIPIRWTAPEAIAYR---KFT  189 (269)
T ss_pred             HHHHHHHHHHCCEeecccChheEEEcCCCcEEEC--CCccccccccCccccccccccCCCcceeecCHhHhccC---ccc
Confidence            3457789999999999999999999999888888  99987332110         1   13469999998753   345


Q ss_pred             chhhHHHHHHHHHHHHh-CCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHhhh
Q psy12581         73 EACDMWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKM  151 (153)
Q Consensus        73 ~~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~~~  151 (153)
                      .++|+||+|++++|+++ |..||...........+ ......+.+...+..+.+++.+||..+|++||++++++..|+++
T Consensus       190 ~~~DvwslG~~l~e~l~~g~~p~~~~~~~~~~~~i-~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~  268 (269)
T cd05065         190 SASDVWSYGIVMWEVMSYGERPYWDMSNQDVINAI-EQDYRLPPPMDCPTALHQLMLDCWQKDRNARPKFGQIVSTLDKM  268 (269)
T ss_pred             chhhhhhhHHHHHHHhcCCCCCCCCCCHHHHHHHH-HcCCcCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence            78999999999999886 99999776655444433 33344455667788999999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=99.92  E-value=3.6e-25  Score=148.45  Aligned_cols=139  Identities=22%  Similarity=0.345  Sum_probs=105.0

Q ss_pred             hhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc-------CCcccCCcccCccccccCCCCCCcchhhHH
Q psy12581          6 IVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ-------RGRCYYPAWMSPEALQKKPGDRNLEACDMW   78 (153)
Q Consensus         6 ~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~-------~~~~~~~~~~~pe~~~~~~~~~~~~~~dv~   78 (153)
                      .-+..|||++++.|+||.+.||+++.++.+++.  |||.+...       ....++..|++||.+.......++.++|+|
T Consensus       116 ~~~l~~lH~~~i~H~dlkp~nili~~~~~~~l~--dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Dvw  193 (267)
T cd06645         116 LQGLYYLHSKGKMHRDIKGANILLTDNGHVKLA--DFGVSAQITATIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIW  193 (267)
T ss_pred             HHHHHHHHHCCeecCCCCHHHEEECCCCCEEEC--cceeeeEccCcccccccccCcccccChhhhccccCCCCCchhhhH
Confidence            456789999999999999999999999988888  99987432       233678899999987532223456789999


Q ss_pred             HHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCC---CCCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581         79 SFAVLLWELATREVPFADLTPMEVGMKVALEGLRITI---PPGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus        79 s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      |+|+++|++++|..||..................++.   ...++..+.+++.+||+.+|++||+++++++
T Consensus       194 SlG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~  264 (267)
T cd06645         194 AVGITAIELAELQPPMFDLHPMRALFLMTKSNFQPPKLKDKMKWSNSFHHFVKMALTKNPKKRPTAEKLLQ  264 (267)
T ss_pred             HHHHHHHHHhcCCCCcccccchhhHHhhhccCCCCCcccccCCCCHHHHHHHHHHccCCchhCcCHHHHhc
Confidence            9999999999999998765543332222222211111   1246778999999999999999999998875

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.92  E-value=6.3e-25  Score=146.74  Aligned_cols=140  Identities=22%  Similarity=0.364  Sum_probs=104.9

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchh------hcccccccccccC---CcccCCcccCccccccCCCCCCcchh
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTAR------INMADAQFSFQQR---GRCYYPAWMSPEALQKKPGDRNLEAC   75 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~k------l~~~d~g~~~~~~---~~~~~~~~~~pe~~~~~~~~~~~~~~   75 (153)
                      .+.++.|||++++.|+||.+.||+++.++..+      +.+.|||.+....   ...++..|++||.+.+.  ...+.++
T Consensus       109 i~~~l~~lH~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~~  186 (258)
T cd05078         109 LAWALHFLEDKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISITVLPKEILLERIPWVPPECIENP--QNLSLAA  186 (258)
T ss_pred             HHHHHHHHHHCCeecCCCccceEEEecccccccCCCceEEecccccccccCCchhccccCCccCchhccCC--CCCCchh
Confidence            45578999999999999999999998877642      2334999874332   24567889999998752  1345789


Q ss_pred             hHHHHHHHHHHHHhC-CCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHh
Q psy12581         76 DMWSFAVLLWELATR-EVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILD  149 (153)
Q Consensus        76 dv~s~g~~~~~~~~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~  149 (153)
                      |+||+|+++|++++| ..|+......... .....  ....|...+..+.+++.+||+.+|++|||++++++.|.
T Consensus       187 DiwslG~~l~~l~~g~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~  258 (258)
T cd05078         187 DKWSFGTTLWEIFSGGDKPLSALDSQKKL-QFYED--RHQLPAPKWTELANLINQCMDYEPDFRPSFRAIIRDLN  258 (258)
T ss_pred             hHHHHHHHHHHHHcCCCCChhhccHHHHH-HHHHc--cccCCCCCcHHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence            999999999999998 4666554443322 12222  33456566788999999999999999999999998763

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>KOG0580|consensus

Probab=99.92  E-value=5.9e-25  Score=140.22  Aligned_cols=135  Identities=19%  Similarity=0.270  Sum_probs=117.3

Q ss_pred             hhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc-----CCcccCCcccCccccccCCCCCCcchhhHHHH
Q psy12581          6 IVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ-----RGRCYYPAWMSPEALQKKPGDRNLEACDMWSF   80 (153)
Q Consensus         6 ~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~-----~~~~~~~~~~~pe~~~~~~~~~~~~~~dv~s~   80 (153)
                      +-|+.|+|.++++|++|.+.|++++..+..|+.  |||.++..     .+.|||..|++||+..+..+.   ...|+|++
T Consensus       134 A~Al~y~h~k~VIhRdiKpenlLlg~~~~lkiA--dfGwsV~~p~~kR~tlcgt~dyl~pEmv~~~~hd---~~Vd~w~l  208 (281)
T KOG0580|consen  134 ANALLYCHLKRVIHRDIKPENLLLGSAGELKIA--DFGWSVHAPSNKRKTLCGTLDYLPPEMVEGRGHD---KFVDLWSL  208 (281)
T ss_pred             HHHHHHhccCCcccCCCCHHHhccCCCCCeecc--CCCceeecCCCCceeeecccccCCHhhcCCCCcc---chhhHHHH
Confidence            457889999999999999999999999999999  99998544     345999999999999876444   78999999


Q ss_pred             HHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHH
Q psy12581         81 AVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPI  147 (153)
Q Consensus        81 g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~  147 (153)
                      |++.||++.|.+||.+....+...++..-  ....|..++.++++++.+|+..+|.+|.+..++++.
T Consensus       209 gvl~yeflvg~ppFes~~~~etYkrI~k~--~~~~p~~is~~a~dlI~~ll~~~p~~r~~l~~v~~h  273 (281)
T KOG0580|consen  209 GVLCYEFLVGLPPFESQSHSETYKRIRKV--DLKFPSTISGGAADLISRLLVKNPIERLALTEVMDH  273 (281)
T ss_pred             HHHHHHHHhcCCchhhhhhHHHHHHHHHc--cccCCcccChhHHHHHHHHhccCccccccHHHHhhh
Confidence            99999999999999988877776666544  445578899999999999999999999999998764

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=99.92  E-value=4.1e-25  Score=150.41  Aligned_cols=137  Identities=20%  Similarity=0.330  Sum_probs=107.6

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc-------CCcccCCcccCccccccCCCCCCcchhhH
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ-------RGRCYYPAWMSPEALQKKPGDRNLEACDM   77 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~-------~~~~~~~~~~~pe~~~~~~~~~~~~~~dv   77 (153)
                      ..-++.|||++++.|+||.++||+++.++.+++.  |||.+...       ....+++.|++||.+.+.   ..+.++|+
T Consensus       125 l~~aL~~LH~~gi~H~dLkp~Nill~~~~~~kl~--dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Dv  199 (296)
T cd06654         125 CLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLT--DFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRK---AYGPKVDI  199 (296)
T ss_pred             HHHHHHHHHHCCcccCCCCHHHEEEcCCCCEEEC--ccccchhccccccccCcccCCccccCHHHHcCC---CCCccchH
Confidence            3446789999999999999999999999988888  99987432       223677899999998753   34578999


Q ss_pred             HHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhcc-ccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581         78 WSFAVLLWELATREVPFADLTPMEVGMKVALEGL-RITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus        78 ~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      |++|++++++++|+.||................. ..+.+...+..+.+++.+||..+|+.||++.++++
T Consensus       200 ~s~Gvil~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~  269 (296)
T cd06654         200 WSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQ  269 (296)
T ss_pred             HHHHHHHHHHHhCCCCCCCCCHHHhHHHHhcCCCCCCCCccccCHHHHHHHHHHCcCCcccCcCHHHHhh
Confidence            9999999999999999977654433332222221 22335567888999999999999999999999986

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=99.92  E-value=3.1e-25  Score=153.79  Aligned_cols=138  Identities=17%  Similarity=0.138  Sum_probs=104.2

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc----CCcccCCcccCccccccCCCCCCcchhhHHHH
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ----RGRCYYPAWMSPEALQKKPGDRNLEACDMWSF   80 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~----~~~~~~~~~~~pe~~~~~~~~~~~~~~dv~s~   80 (153)
                      ..-++.|||++++.|+||++.||+++.++.+|+.  |||++...    ....+++.|++||.+.+.  ..++.++|+||+
T Consensus       127 i~~aL~~LH~~~ivHrdikp~Nil~~~~~~~kl~--Dfg~~~~~~~~~~~~~~t~~y~aPE~~~~~--~~~~~~~Diwsl  202 (343)
T cd07878         127 LLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRIL--DFGLARQADDEMTGYVATRWYRAPEIMLNW--MHYNQTVDIWSV  202 (343)
T ss_pred             HHHHHHHHHHCCeecccCChhhEEECCCCCEEEc--CCccceecCCCcCCccccccccCchHhcCC--ccCCchhhhHhH
Confidence            3457899999999999999999999999998888  99998543    234678899999998652  234578999999


Q ss_pred             HHHHHHHHhCCCCCCCCCchhhhHHHHhhcc---------------------ccCCC--------CCCCHHHHHHHHHHh
Q psy12581         81 AVLLWELATREVPFADLTPMEVGMKVALEGL---------------------RITIP--------PGISSHLSKLIRICM  131 (153)
Q Consensus        81 g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~---------------------~~~~~--------~~~~~~~~~l~~~cl  131 (153)
                      |+++|++++|..||.+.........+.....                     ....+        ...++.+.+++.+||
T Consensus       203 G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL  282 (343)
T cd07878         203 GCIMAELLKGKALFPGNDYIDQLKRIMEVVGTPSPEVLKKISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKML  282 (343)
T ss_pred             HHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhcchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHc
Confidence            9999999999999976544332222111000                     00001        124567889999999


Q ss_pred             cCCCCCCCCHHHHHH
Q psy12581        132 NEDPGKRPTFDMVLP  146 (153)
Q Consensus       132 ~~~p~~Rps~~~~l~  146 (153)
                      +.||++|||+.++++
T Consensus       283 ~~dp~~R~s~~ell~  297 (343)
T cd07878         283 VLDSDKRISASEALA  297 (343)
T ss_pred             CCChhhCCCHHHHhc
Confidence            999999999999984

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=99.92  E-value=4.3e-25  Score=147.56  Aligned_cols=139  Identities=24%  Similarity=0.331  Sum_probs=106.9

Q ss_pred             hhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc-------CCcccCCcccCccccccCCCCCCcchhhHH
Q psy12581          6 IVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ-------RGRCYYPAWMSPEALQKKPGDRNLEACDMW   78 (153)
Q Consensus         6 ~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~-------~~~~~~~~~~~pe~~~~~~~~~~~~~~dv~   78 (153)
                      .-++.|||++++.|+|+.++||+++.++.+++.  |||.+...       ....++..|++||.+.+.....++.++|+|
T Consensus       111 ~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~--d~g~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~  188 (262)
T cd06613         111 LKGLAYLHETGKIHRDIKGANILLTEDGDVKLA--DFGVSAQLTATIAKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIW  188 (262)
T ss_pred             HHHHHHHHhCCceecCCChhhEEECCCCCEEEC--ccccchhhhhhhhccccccCCccccCchhhcccccCCcCchhhhH
Confidence            456789999999999999999999999988888  99987432       223567789999998754223455789999


Q ss_pred             HHHHHHHHHHhCCCCCCCCCchhhhHHHHhhcccc---CCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581         79 SFAVLLWELATREVPFADLTPMEVGMKVALEGLRI---TIPPGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus        79 s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      |+|++++++++|..||.+.................   ..+...+..+.+++.+||..+|+.|||+++++.
T Consensus       189 slG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~  259 (262)
T cd06613         189 ALGITAIELAELQPPMFDLHPMRALFLISKSNFPPPKLKDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQ  259 (262)
T ss_pred             HHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCccccchhhhhHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence            99999999999999998766544433332221111   122345678999999999999999999999875

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=99.92  E-value=1.4e-26  Score=159.01  Aligned_cols=132  Identities=20%  Similarity=0.288  Sum_probs=107.6

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc-------CCcccCCcccCccccccCCCCCCcchhhH
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ-------RGRCYYPAWMSPEALQKKPGDRNLEACDM   77 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~-------~~~~~~~~~~~pe~~~~~~~~~~~~~~dv   77 (153)
                      ..-++.|||++++.|+||.+.||+++.++.+++.  |||++...       ....|++.|++||.+.+.   ..+.++|+
T Consensus       107 i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kL~--Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~---~~~~~~Di  181 (318)
T cd05582         107 LALALDHLHSLGIIYRDLKPENILLDEEGHIKLT--DFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRR---GHTQSADW  181 (318)
T ss_pred             HHHHHHHHHHCCEecCCCCHHHeEECCCCcEEEe--eccCCcccCCCCCceecccCChhhcCHHHHcCC---CCCCccce
Confidence            3457899999999999999999999999988888  99987432       223678899999998764   34578999


Q ss_pred             HHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHH
Q psy12581         78 WSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDM  143 (153)
Q Consensus        78 ~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~  143 (153)
                      ||+|+++|++++|+.||...........+...  ....|...+..+.+++.+||+.||++||++.+
T Consensus       182 wslG~il~el~tg~~p~~~~~~~~~~~~i~~~--~~~~p~~~~~~~~~li~~~l~~~P~~R~~a~~  245 (318)
T cd05582         182 WSFGVLMFEMLTGSLPFQGKDRKETMTMILKA--KLGMPQFLSPEAQSLLRALFKRNPANRLGAGP  245 (318)
T ss_pred             eccceEeeeeccCCCCCCCCCHHHHHHHHHcC--CCCCCCCCCHHHHHHHHHHhhcCHhHcCCCCC
Confidence            99999999999999999877665555444333  34456778999999999999999999999544

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.92  E-value=1.1e-24  Score=147.28  Aligned_cols=142  Identities=22%  Similarity=0.327  Sum_probs=106.7

Q ss_pred             hhHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccccCC----------cccCCcccCccccccCCCCCCcchh
Q psy12581          6 IVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQRG----------RCYYPAWMSPEALQKKPGDRNLEAC   75 (153)
Q Consensus         6 ~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~~----------~~~~~~~~~pe~~~~~~~~~~~~~~   75 (153)
                      .-++.|||.+++.|+||.+.||+++.++.+++.  |||++.....          ..++..|++||.+.+.   ..+.++
T Consensus       118 ~~aL~~LH~~~i~H~dlkp~nili~~~~~~~l~--dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~  192 (284)
T cd05081         118 CKGMEYLGSKRYVHRDLATRNILVESENRVKIG--DFGLTKVLPQDKEYYKVREPGESPIFWYAPESLTES---KFSVAS  192 (284)
T ss_pred             HHHHHHHHHCCceeccCCHhhEEECCCCeEEEC--CCcccccccCCCcceeecCCCCCceEeeCHHHhccC---CcChHH
Confidence            456789999999999999999999999988888  9998753211          1223458999988653   345889


Q ss_pred             hHHHHHHHHHHHHhCCCCCCCCCchh---------------hhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCC
Q psy12581         76 DMWSFAVLLWELATREVPFADLTPME---------------VGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPT  140 (153)
Q Consensus        76 dv~s~g~~~~~~~~g~~p~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps  140 (153)
                      |+||+|++++++++|..++.......               ............+.+...+..+.+++.+||..+|++|||
T Consensus       193 Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt  272 (284)
T cd05081         193 DVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYHLIELLKNNGRLPAPPGCPAEIYAIMKECWNNDPSQRPS  272 (284)
T ss_pred             HHHHHHHHHHHHhhcCCcCCCcchhhhhhcccccccccchHHHHHHHhcCCcCCCCCCCCHHHHHHHHHHccCChhhCCC
Confidence            99999999999999866543221100               011122233344455667889999999999999999999


Q ss_pred             HHHHHHHHhhhh
Q psy12581        141 FDMVLPILDKMK  152 (153)
Q Consensus       141 ~~~~l~~L~~~~  152 (153)
                      +.++++.|+.++
T Consensus       273 ~~ei~~~l~~~~  284 (284)
T cd05081         273 FSELALQVEAIR  284 (284)
T ss_pred             HHHHHHHHHhcC
Confidence            999999998864

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=99.92  E-value=7.2e-25  Score=147.20  Aligned_cols=141  Identities=25%  Similarity=0.436  Sum_probs=106.0

Q ss_pred             hhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc---------CCcccCCcccCccccccCC----CCCCc
Q psy12581          6 IVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ---------RGRCYYPAWMSPEALQKKP----GDRNL   72 (153)
Q Consensus         6 ~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~---------~~~~~~~~~~~pe~~~~~~----~~~~~   72 (153)
                      +-+..|||++++.|+||++.||+++.++.+|+.  |||.+...         ....++..|++||.+....    ....+
T Consensus       110 ~~~l~~lH~~~ivH~dlkp~Nill~~~~~~kl~--dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~  187 (269)
T cd05042         110 ASGLLWLHQADFIHSDLALRNCQLTADLSVKIG--DYGLALEQYPEDYYITKDCHAVPLRWLAPELVEIRGQDLLPKDQT  187 (269)
T ss_pred             HHHHHHHHhcCEecccccHhheEecCCCcEEEe--ccccccccccchheeccCCCCCcccccCHHHHhhccccccccccc
Confidence            445789999999999999999999999998888  99987432         1123456799999875321    12346


Q ss_pred             chhhHHHHHHHHHHHHh-CCCCCCCCCchhhhHHHHhhcc-c---cCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHH
Q psy12581         73 EACDMWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGL-R---ITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPI  147 (153)
Q Consensus        73 ~~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~  147 (153)
                      .++|+||+|+++|++++ |..||................. .   +..+...+....+++..||. ||++||+++++++.
T Consensus       188 ~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-dp~~Rpt~~~v~~~  266 (269)
T cd05042         188 KKSNIWSLGVTMWELFTAADQPYPDLSDEQVLKQVVREQDIKLPKPQLDLKYSDRWYEVMQFCWL-DPETRPTAEEVHEL  266 (269)
T ss_pred             hhhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhhccCccCCCCcccccCCHHHHHHHHHHhc-CcccccCHHHHHHH
Confidence            78999999999999998 7888877665554444333221 1   12234577888999999994 99999999999988


Q ss_pred             Hh
Q psy12581        148 LD  149 (153)
Q Consensus       148 L~  149 (153)
                      |+
T Consensus       267 l~  268 (269)
T cd05042         267 LT  268 (269)
T ss_pred             hc
Confidence            74

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=99.92  E-value=3.4e-25  Score=148.61  Aligned_cols=136  Identities=22%  Similarity=0.297  Sum_probs=107.2

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccccC----------CcccCCcccCccccccCCCCCCcch
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQR----------GRCYYPAWMSPEALQKKPGDRNLEA   74 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~----------~~~~~~~~~~pe~~~~~~~~~~~~~   74 (153)
                      .+-+..|||++++.|+|+.++||+++.++.+++.  |||++....          ...++..|++||.+.+.   .++.+
T Consensus       115 i~~~l~~LH~~~i~H~~l~p~nil~~~~~~~~l~--dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~  189 (266)
T cd06651         115 ILEGMSYLHSNMIVHRDIKGANILRDSAGNVKLG--DFGASKRLQTICMSGTGIRSVTGTPYWMSPEVISGE---GYGRK  189 (266)
T ss_pred             HHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEc--cCCCccccccccccCCccccCCccccccCHHHhCCC---CCCch
Confidence            3456789999999999999999999999988888  999874321          12467789999998753   35578


Q ss_pred             hhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581         75 CDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus        75 ~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      +|+||+|++++++++|+.||..................+..+...+..+.+++ +||..+|++||+++++++
T Consensus       190 ~Dv~slG~i~~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~  260 (266)
T cd06651         190 ADVWSLGCTVVEMLTEKPPWAEYEAMAAIFKIATQPTNPQLPSHISEHARDFL-GCIFVEARHRPSAEELLR  260 (266)
T ss_pred             hhhHHHHHHHHHHHHCCCCccccchHHHHHHHhcCCCCCCCchhcCHHHHHHH-HHhcCChhhCcCHHHHhc
Confidence            99999999999999999999876555544443333334455666788888888 677789999999999875

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=99.92  E-value=1.7e-25  Score=154.28  Aligned_cols=135  Identities=20%  Similarity=0.296  Sum_probs=104.9

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc-------CCcccCCcccCccccccCCCCCCcchhhH
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ-------RGRCYYPAWMSPEALQKKPGDRNLEACDM   77 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~-------~~~~~~~~~~~pe~~~~~~~~~~~~~~dv   77 (153)
                      ..-++.|||++++.|+||++.||+++.++.+|+.  |||++...       ...+|++.|++||.+.+.   .++.++|+
T Consensus       105 i~~~l~~lH~~~ivH~dlkp~Nili~~~~~~kL~--Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~Di  179 (329)
T cd05588         105 ISLALNFLHERGIIYRDLKLDNVLLDAEGHIKLT--DYGMCKEGIRPGDTTSTFCGTPNYIAPEILRGE---DYGFSVDW  179 (329)
T ss_pred             HHHHHHHHHHCCeEecCCCHHHeEECCCCCEEEC--cCccccccccCCCccccccCCccccCHHHHcCC---CCCCccce
Confidence            3457899999999999999999999999998888  99987431       234688999999998764   34578999


Q ss_pred             HHHHHHHHHHHhCCCCCCCCCc--------hhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCC------HHH
Q psy12581         78 WSFAVLLWELATREVPFADLTP--------MEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPT------FDM  143 (153)
Q Consensus        78 ~s~g~~~~~~~~g~~p~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps------~~~  143 (153)
                      ||+|+++|++++|+.||.....        ........ .......|...+..+.+++.+||+.||++|++      +++
T Consensus       180 wslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~-~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~  258 (329)
T cd05588         180 WALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVI-LEKQIRIPRSLSVKASSVLKGFLNKDPKERLGCHPQTGFRD  258 (329)
T ss_pred             echHHHHHHHHHCCCCcccccccccccccchHHHHHHH-HcCCCCCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHH
Confidence            9999999999999999963211        11111111 12234557778999999999999999999997      566


Q ss_pred             HH
Q psy12581        144 VL  145 (153)
Q Consensus       144 ~l  145 (153)
                      ++
T Consensus       259 i~  260 (329)
T cd05588         259 IK  260 (329)
T ss_pred             Hh
Confidence            65

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=99.92  E-value=1.4e-25  Score=154.76  Aligned_cols=131  Identities=20%  Similarity=0.309  Sum_probs=102.4

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc-------CCcccCCcccCccccccCCCCCCcchhhH
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ-------RGRCYYPAWMSPEALQKKPGDRNLEACDM   77 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~-------~~~~~~~~~~~pe~~~~~~~~~~~~~~dv   77 (153)
                      ..-++.|||++++.|+||++.||+++.++.+|+.  |||++...       ....|++.|++||.+.+.   .++.++|+
T Consensus       105 i~~~l~~lH~~~ivH~Dikp~Nili~~~~~~kL~--DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~Di  179 (329)
T cd05618         105 ISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLT--DYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGE---DYGFSVDW  179 (329)
T ss_pred             HHHHHHHHHHCCeeeCCCCHHHEEECCCCCEEEe--eCCccccccCCCCccccccCCccccCHHHHcCC---CCCCccce
Confidence            4457899999999999999999999999999888  99987431       234688999999998764   34578999


Q ss_pred             HHHHHHHHHHHhCCCCCCCCCc--------hhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCH
Q psy12581         78 WSFAVLLWELATREVPFADLTP--------MEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTF  141 (153)
Q Consensus        78 ~s~g~~~~~~~~g~~p~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~  141 (153)
                      ||+|+++|++++|..||.....        ........ .......|...+..+.+++.+||+.||++|+++
T Consensus       180 wslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i-~~~~~~~p~~~~~~~~~ll~~~L~~dP~~R~~~  250 (329)
T cd05618         180 WALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVI-LEKQIRIPRSLSVKAASVLKSFLNKDPKERLGC  250 (329)
T ss_pred             ecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHH-hcCCCCCCCCCCHHHHHHHHHHhcCCHHHcCCC
Confidence            9999999999999999953111        11111111 122345677889999999999999999999984

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=99.92  E-value=4.2e-26  Score=157.09  Aligned_cols=132  Identities=17%  Similarity=0.191  Sum_probs=107.2

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc-------CCcccCCcccCccccccCCCCCCcchhhH
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ-------RGRCYYPAWMSPEALQKKPGDRNLEACDM   77 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~-------~~~~~~~~~~~pe~~~~~~~~~~~~~~dv   77 (153)
                      ..-++.|||++++.|+||++.||+++.++.+|+.  |||++...       ....|++.|++||.+.+.   .++.++|+
T Consensus       105 i~~al~~lH~~givH~Dlkp~NIll~~~~~~kL~--DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~Dv  179 (325)
T cd05604         105 IASALGYLHSINIVYRDLKPENILLDSQGHVVLT--DFGLCKEGIAQSDTTTTFCGTPEYLAPEVIRKQ---PYDNTVDW  179 (325)
T ss_pred             HHHHHHHHHHCCeeecCCCHHHeEECCCCCEEEe--ecCCcccCCCCCCCcccccCChhhCCHHHHcCC---CCCCcCcc
Confidence            4567899999999999999999999999988888  99987432       223688999999998764   34578999


Q ss_pred             HHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHH
Q psy12581         78 WSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDM  143 (153)
Q Consensus        78 ~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~  143 (153)
                      ||+|+++|++++|..||...........+....  ...+...+..+.+++.+|++.+|.+||++.+
T Consensus       180 wslG~il~el~~G~~pf~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ll~~ll~~~p~~R~~~~~  243 (325)
T cd05604         180 WCLGAVLYEMLYGLPPFYCRDVAEMYDNILHKP--LVLRPGASLTAWSILEELLEKDRQRRLGAKE  243 (325)
T ss_pred             ccccceehhhhcCCCCCCCCCHHHHHHHHHcCC--ccCCCCCCHHHHHHHHHHhccCHHhcCCCCC
Confidence            999999999999999998876665555444332  2334567889999999999999999998753

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=99.92  E-value=4.9e-25  Score=148.10  Aligned_cols=140  Identities=21%  Similarity=0.309  Sum_probs=106.7

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc-------CCcccCCcccCccccccCC--CCCCcchh
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ-------RGRCYYPAWMSPEALQKKP--GDRNLEAC   75 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~-------~~~~~~~~~~~pe~~~~~~--~~~~~~~~   75 (153)
                      ..-++.|||++++.|+||.++||+++.++.+++.  |||.+...       ....++..|++||.+....  ...++.++
T Consensus       122 l~~al~~lH~~~i~H~~l~p~ni~~~~~~~~~l~--d~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~  199 (275)
T cd06608         122 TLRGLAYLHENKVIHRDIKGQNILLTKNAEVKLV--DFGVSAQLDSTLGRRNTFIGTPYWMAPEVIACDEQPDASYDARS  199 (275)
T ss_pred             HHHHHHHHhcCCcccCCCCHHHEEEccCCeEEEC--CCccceecccchhhhcCccccccccCHhHhcccccccCCccccc
Confidence            3456789999999999999999999999988888  99987332       2335678899999875422  12345789


Q ss_pred             hHHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhcc-ccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581         76 DMWSFAVLLWELATREVPFADLTPMEVGMKVALEGL-RITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus        76 dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      |+|++|++++++++|..||...........+..... ....+...+..+.+++.+||..||++|||+.++++
T Consensus       200 Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~  271 (275)
T cd06608         200 DVWSLGITAIELADGKPPLCDMHPMRALFKIPRNPPPTLKSPENWSKKFNDFISECLIKNYEQRPFMEELLE  271 (275)
T ss_pred             cHHHhHHHHHHHHhCCCCccccchHHHHHHhhccCCCCCCchhhcCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence            999999999999999999976554444333332211 11223346789999999999999999999999875

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=99.92  E-value=9.1e-25  Score=146.59  Aligned_cols=140  Identities=24%  Similarity=0.449  Sum_probs=111.1

Q ss_pred             hhHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccccCC----------cccCCcccCccccccCCCCCCcchh
Q psy12581          6 IVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQRG----------RCYYPAWMSPEALQKKPGDRNLEAC   75 (153)
Q Consensus         6 ~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~~----------~~~~~~~~~pe~~~~~~~~~~~~~~   75 (153)
                      +-+..|||++++.|+||.+.|++++.++.+++.  |||.+.....          ..++..|++||.+.+.   ..+.++
T Consensus       116 ~~~l~~lH~~~i~h~dlkp~nili~~~~~~~l~--dfg~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~---~~~~~~  190 (267)
T cd05066         116 ASGMKYLSDMGYVHRDLAARNILVNSNLVCKVS--DFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYR---KFTSAS  190 (267)
T ss_pred             HHHHHHHHHCCEeehhhchhcEEECCCCeEEeC--CCCcccccccccceeeecCCCccceeecCHhHhccC---ccCchh
Confidence            456789999999999999999999999988888  9998743211          1123579999998753   355889


Q ss_pred             hHHHHHHHHHHHHh-CCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHhhh
Q psy12581         76 DMWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKM  151 (153)
Q Consensus        76 dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~~~  151 (153)
                      |+|++|++++++++ |..||......+....+ ......+.+...+..+.+++.+||+.+|++||++.++++.|+++
T Consensus       191 Dv~slG~~l~ell~~g~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~  266 (267)
T cd05066         191 DVWSYGIVMWEVMSYGERPYWEMSNQDVIKAI-EEGYRLPAPMDCPAALHQLMLDCWQKDRNERPKFEQIVSILDKL  266 (267)
T ss_pred             hhHHHHHHHHHHhcCCCCCcccCCHHHHHHHH-hCCCcCCCCCCCCHHHHHHHHHHcccCchhCCCHHHHHHHHHhh
Confidence            99999999999886 99999776655443333 33344445556788999999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>KOG1989|consensus

Probab=99.92  E-value=3.4e-25  Score=161.58  Aligned_cols=143  Identities=19%  Similarity=0.243  Sum_probs=116.8

Q ss_pred             chhhHHhhhhcCC--CCCCCeeeeeeeeccccchhhccccccccccc----------------CCcccCCcccCcccccc
Q psy12581          4 KKIVYSFYLNSKK--SKTSNAFLFCCQIDEDLTARINMADAQFSFQQ----------------RGRCYYPAWMSPEALQK   65 (153)
Q Consensus         4 ~~~~~~~~lh~~~--i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~----------------~~~~~~~~~~~pe~~~~   65 (153)
                      |..-+..+||...  |+|+||++.|++++.+|..||+  |||.+...                -...-|+.|.+||++.-
T Consensus       152 dv~~AVa~mH~~~pPiIHRDLKiENvLls~~g~~KLC--DFGSatt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDl  229 (738)
T KOG1989|consen  152 DVCEAVAAMHYLKPPIIHRDLKIENVLLSADGNYKLC--DFGSATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDL  229 (738)
T ss_pred             HHHHHHHHHhcCCCccchhhhhhhheEEcCCCCEEeC--cccccccccCCCccHHHHHHHHHHHHhhCCccccChHHHhh
Confidence            4455677888877  8999999999999999999999  99988221                01256889999999986


Q ss_pred             CCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHH
Q psy12581         66 KPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVL  145 (153)
Q Consensus        66 ~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l  145 (153)
                      ......+.|+|+|++||++|.++....||++.....    |+...+..+.....+..+.+||..||+.+|+.||++-+++
T Consensus       230 ysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~la----Ilng~Y~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~  305 (738)
T KOG1989|consen  230 YSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGKLA----ILNGNYSFPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVL  305 (738)
T ss_pred             hcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCccee----EEeccccCCCCccHHHHHHHHHHHHhccCcccCCCHHHHH
Confidence            655667899999999999999999999997754333    4445555554556889999999999999999999999999


Q ss_pred             HHHhhhh
Q psy12581        146 PILDKMK  152 (153)
Q Consensus       146 ~~L~~~~  152 (153)
                      ..+.+|.
T Consensus       306 ~~~~~l~  312 (738)
T KOG1989|consen  306 EEIFELA  312 (738)
T ss_pred             HHHHHHh
Confidence            9887764

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.92  E-value=7.8e-25  Score=148.14  Aligned_cols=142  Identities=23%  Similarity=0.314  Sum_probs=107.3

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc----------CCcccCCcccCccccccCCCCCCcch
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ----------RGRCYYPAWMSPEALQKKPGDRNLEA   74 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~----------~~~~~~~~~~~pe~~~~~~~~~~~~~   74 (153)
                      ..-++.|||++++.|+||.+.||+++.++.+++.  |||++...          ....++..|++||.+.+.   ..+.+
T Consensus       118 i~~aL~~lH~~gi~H~dlkp~Nil~~~~~~~~l~--dfg~~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~---~~~~~  192 (284)
T cd05079         118 ICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIG--DFGLTKAIETDKEYYTVKDDLDSPVFWYAPECLIQS---KFYIA  192 (284)
T ss_pred             HHHHHHHHHHCCeeecccchheEEEcCCCCEEEC--CCccccccccCccceeecCCCCCCccccCHHHhccC---CCCcc
Confidence            3456799999999999999999999999988888  99987432          123455679999988653   34578


Q ss_pred             hhHHHHHHHHHHHHhCCCCCCCCC--------------chhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCC
Q psy12581         75 CDMWSFAVLLWELATREVPFADLT--------------PMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPT  140 (153)
Q Consensus        75 ~dv~s~g~~~~~~~~g~~p~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps  140 (153)
                      +|+||+|+++++++++..|.....              ...........+...+.+...+..+.+++.+||+.+|++||+
T Consensus       193 ~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt  272 (284)
T cd05079         193 SDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVRVLEEGKRLPRPPNCPEEVYQLMRKCWEFQPSKRTT  272 (284)
T ss_pred             ccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHHHHHHcCccCCCCCCCCHHHHHHHHHHccCCcccCcC
Confidence            999999999999999766542210              001111122233344456668899999999999999999999


Q ss_pred             HHHHHHHHhhh
Q psy12581        141 FDMVLPILDKM  151 (153)
Q Consensus       141 ~~~~l~~L~~~  151 (153)
                      +.++++.|+.+
T Consensus       273 ~~~il~~l~~~  283 (284)
T cd05079         273 FQNLIEGFEAI  283 (284)
T ss_pred             HHHHHHHHHhh
Confidence            99999999875

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=99.92  E-value=7.3e-25  Score=149.96  Aligned_cols=138  Identities=13%  Similarity=0.112  Sum_probs=104.6

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc-------CCcccCCcccCccccccCCCCCCcchhhH
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ-------RGRCYYPAWMSPEALQKKPGDRNLEACDM   77 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~-------~~~~~~~~~~~pe~~~~~~~~~~~~~~dv   77 (153)
                      ..-++.|||++++.|+||.+.||+++.++.+|+.  |||.+...       ....+++.|++||.+.+.  ..++.++|+
T Consensus       113 i~~aL~~lH~~~ivH~dlkp~Nill~~~~~~kl~--Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~~Di  188 (309)
T cd07872         113 ILRGLAYCHRRKVLHRDLKPQNLLINERGELKLA--DFGLARAKSVPTKTYSNEVVTLWYRPPDVLLGS--SEYSTQIDM  188 (309)
T ss_pred             HHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEC--ccccceecCCCccccccccccccccCCHHHhCC--CCCCcHHHH
Confidence            3456899999999999999999999999988888  99987432       123567889999988642  234578999


Q ss_pred             HHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhc-------------------cc-c--------CCCCCCCHHHHHHHHH
Q psy12581         78 WSFAVLLWELATREVPFADLTPMEVGMKVALEG-------------------LR-I--------TIPPGISSHLSKLIRI  129 (153)
Q Consensus        78 ~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~-------------------~~-~--------~~~~~~~~~~~~l~~~  129 (153)
                      ||+|++++++++|+.||.+.........+....                   .. +        ......+.++.+++.+
T Consensus       189 wslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  268 (309)
T cd07872         189 WGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSNDEFKNYNFPKYKPQPLINHAPRLDTEGIELLTK  268 (309)
T ss_pred             HHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcchhhhhhhhcCccCCCchhhhccCCCHHHHHHHHH
Confidence            999999999999999997765443322221100                   00 0        0112357789999999


Q ss_pred             HhcCCCCCCCCHHHHHH
Q psy12581        130 CMNEDPGKRPTFDMVLP  146 (153)
Q Consensus       130 cl~~~p~~Rps~~~~l~  146 (153)
                      ||+.||.+|||+.++++
T Consensus       269 ~L~~dp~~R~t~~e~l~  285 (309)
T cd07872         269 FLQYESKKRISAEEAMK  285 (309)
T ss_pred             hccCChhhCCCHHHHhc
Confidence            99999999999999875

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=99.92  E-value=3.6e-25  Score=154.57  Aligned_cols=138  Identities=19%  Similarity=0.210  Sum_probs=105.9

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc------------------------------------
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ------------------------------------   48 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~------------------------------------   48 (153)
                      ...++.|||+++|.|+||++.||+++.++.+|+.  |||++...                                    
T Consensus       110 i~~aL~~lH~~givHrDlKp~NILi~~~~~vkL~--DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (363)
T cd05628         110 TVLAIDSIHQLGFIHRDIKPDNLLLDSKGHVKLS--DFGLCTGLKKAHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKR  187 (363)
T ss_pred             HHHHHHHHHhCCeEecCCCHHHeEECCCCCEEEe--eccCcccccccccccccccccccccccccccccccccccchhhh
Confidence            3457899999999999999999999999998888  99987321                                    


Q ss_pred             ------CCcccCCcccCccccccCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCCC--CCC
Q psy12581         49 ------RGRCYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPP--GIS  120 (153)
Q Consensus        49 ------~~~~~~~~~~~pe~~~~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~--~~~  120 (153)
                            ...+||+.|+|||.+.+.   .++.++|+||+|+++|++++|..||.+.........+.........|.  ..+
T Consensus       188 ~~~~~~~~~~Gt~~Y~aPE~~~~~---~~~~~~DvwSlGvil~ell~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s  264 (363)
T cd05628         188 NRRQLAFSTVGTPDYIAPEVFMQT---GYNKLCDWWSLGVIMYEMLIGYPPFCSETPQETYKKVMNWKETLIFPPEVPIS  264 (363)
T ss_pred             ccccccccccCCccccCHHHHcCC---CCCCchhhhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHcCcCcccCCCcCCCC
Confidence                  123689999999998764   345789999999999999999999988776665555543222233333  367


Q ss_pred             HHHHHHHHHHhcC--CCCCCCCHHHHHHH
Q psy12581        121 SHLSKLIRICMNE--DPGKRPTFDMVLPI  147 (153)
Q Consensus       121 ~~~~~l~~~cl~~--~p~~Rps~~~~l~~  147 (153)
                      ..+.+++.+++..  ++..||+++++++.
T Consensus       265 ~~~~~li~~l~~~~~~r~~r~~~~ei~~h  293 (363)
T cd05628         265 EKAKDLILRFCCEWEHRIGAPGVEEIKTN  293 (363)
T ss_pred             HHHHHHHHHHcCChhhcCCCCCHHHHhCC
Confidence            8999999986552  23356899998753

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=99.92  E-value=1.6e-24  Score=144.48  Aligned_cols=138  Identities=25%  Similarity=0.458  Sum_probs=108.6

Q ss_pred             hhHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccccC--------CcccCCcccCccccccCCCCCCcchhhH
Q psy12581          6 IVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQR--------GRCYYPAWMSPEALQKKPGDRNLEACDM   77 (153)
Q Consensus         6 ~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~--------~~~~~~~~~~pe~~~~~~~~~~~~~~dv   77 (153)
                      ..+..|||++++.|+||.+.||+++.++.+++.  |||.+....        ...++..|++||.+.+.   ..+.++|+
T Consensus       110 ~~~l~~lH~~~i~h~dl~p~ni~i~~~~~~~l~--d~g~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~---~~~~~~Dv  184 (256)
T cd05112         110 CEGMAYLESSNVIHRDLAARNCLVGENQVVKVS--DFGMTRFVLDDQYTSSTGTKFPVKWSSPEVFSFS---KYSSKSDV  184 (256)
T ss_pred             HHHHHHHHHCCccccccccceEEEcCCCeEEEC--CCcceeecccCcccccCCCccchhhcCHhHhccC---CcChHHHH
Confidence            456789999999999999999999999888888  999874321        11234579999988753   34578999


Q ss_pred             HHHHHHHHHHHh-CCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHh
Q psy12581         78 WSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILD  149 (153)
Q Consensus        78 ~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~  149 (153)
                      ||+|+++|++++ |..||...........+ ........+...+..+.+++.+||+.+|++||++.++++.|+
T Consensus       185 ~slG~~l~el~~~g~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l~  256 (256)
T cd05112         185 WSFGVLMWEVFSEGKTPYENRSNSEVVETI-NAGFRLYKPRLASQSVYELMQHCWKERPEDRPSFSLLLHQLA  256 (256)
T ss_pred             HHHHHHHHHHHcCCCCCCCcCCHHHHHHHH-hCCCCCCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHhhC
Confidence            999999999998 89998766544443332 233344445667899999999999999999999999998874

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>KOG0661|consensus

Probab=99.92  E-value=7.2e-25  Score=151.30  Aligned_cols=136  Identities=19%  Similarity=0.158  Sum_probs=110.8

Q ss_pred             HHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc------CCcccCCcccCccccccCCCCCCcchhhHHHHH
Q psy12581          8 YSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ------RGRCYYPAWMSPEALQKKPGDRNLEACDMWSFA   81 (153)
Q Consensus         8 ~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~------~~~~~~~~~~~pe~~~~~~~~~~~~~~dv~s~g   81 (153)
                      .+.|+|.+|+-|+|+++.||++.....+||.  |||++...      +.-..|.+|.|||++...  +.++.+.|+|++|
T Consensus       122 GL~hiHk~GfFHRDlKPENiLi~~~~~iKia--DFGLARev~SkpPYTeYVSTRWYRAPEvLLrs--~~Ys~pvD~wA~G  197 (538)
T KOG0661|consen  122 GLAHIHKHGFFHRDLKPENILISGNDVIKIA--DFGLAREVRSKPPYTEYVSTRWYRAPEVLLRS--GYYSSPVDMWAVG  197 (538)
T ss_pred             HHHHHHhcCcccccCChhheEecccceeEec--ccccccccccCCCcchhhhcccccchHHhhhc--cccCCchHHHHHH
Confidence            4679999999999999999999988888888  99999544      334788999999998753  4567899999999


Q ss_pred             HHHHHHHhCCCCCCCCCchhhhHHHHhhcccc-----------------CCC-----------CCCCHHHHHHHHHHhcC
Q psy12581         82 VLLWELATREVPFADLTPMEVGMKVALEGLRI-----------------TIP-----------PGISSHLSKLIRICMNE  133 (153)
Q Consensus        82 ~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~-----------------~~~-----------~~~~~~~~~l~~~cl~~  133 (153)
                      |+++|+.+-++-|.+.++.++..+++.--..+                 ..|           ...+.++.+++.+|+..
T Consensus       198 cI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~~La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~W  277 (538)
T KOG0661|consen  198 CIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPEGYNLASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAW  277 (538)
T ss_pred             HHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccchhHHHHHHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcC
Confidence            99999999999999988888777765311111                 111           23678999999999999


Q ss_pred             CCCCCCCHHHHHHH
Q psy12581        134 DPGKRPTFDMVLPI  147 (153)
Q Consensus       134 ~p~~Rps~~~~l~~  147 (153)
                      ||++|||+.++++.
T Consensus       278 DP~kRpTA~~al~~  291 (538)
T KOG0661|consen  278 DPDKRPTASQALQH  291 (538)
T ss_pred             CCccCccHHHHhcC
Confidence            99999999998863

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=99.92  E-value=1.3e-24  Score=145.63  Aligned_cols=136  Identities=18%  Similarity=0.297  Sum_probs=108.0

Q ss_pred             hhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc-------------CCcccCCcccCccccccCCCCCCc
Q psy12581          6 IVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ-------------RGRCYYPAWMSPEALQKKPGDRNL   72 (153)
Q Consensus         6 ~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~-------------~~~~~~~~~~~pe~~~~~~~~~~~   72 (153)
                      .-++.|||.+++.|+||.+.||+++.++.+++.  |||.+...             ....++..|++||.+.+.   ..+
T Consensus       112 ~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l~--dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~---~~~  186 (265)
T cd06631         112 LDGVAYLHNNCVVHRDIKGNNVMLMPNGIIKLI--DFGCARRLAWVGLHGTHSNMLKSMHGTPYWMAPEVINES---GYG  186 (265)
T ss_pred             HHHHHHHHhCCcccCCcCHHhEEECCCCeEEec--cchhhHhhhhccccccccccccccCCCccccChhhhcCC---CCc
Confidence            446789999999999999999999999988888  99987432             123467789999998754   345


Q ss_pred             chhhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhh-ccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581         73 EACDMWSFAVLLWELATREVPFADLTPMEVGMKVALE-GLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus        73 ~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      .++|+|++|++++++++|..||...........+... ...+..+...+..+.+++++||+.+|++||++.++++
T Consensus       187 ~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~  261 (265)
T cd06631         187 RKSDIWSIGCTVFEMATGKPPLASMDRLAAMFYIGAHRGLMPRLPDSFSAAAIDFVTSCLTRDQHERPSALQLLR  261 (265)
T ss_pred             chhhHHHHHHHHHHHHhCCCccccCChHHHHHHhhhccCCCCCCCCCCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence            7899999999999999999999776544433332222 2334456678899999999999999999999999875

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=99.92  E-value=8.2e-25  Score=145.74  Aligned_cols=136  Identities=24%  Similarity=0.366  Sum_probs=105.5

Q ss_pred             hhHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccccC-------CcccCCcccCccccccCCCCCCcchhhHH
Q psy12581          6 IVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQR-------GRCYYPAWMSPEALQKKPGDRNLEACDMW   78 (153)
Q Consensus         6 ~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~-------~~~~~~~~~~pe~~~~~~~~~~~~~~dv~   78 (153)
                      .-++.|||+.++.|+++.+.||+++.++.+++.  |||.+....       ...++..|++||.+.+.   ..+.++|+|
T Consensus       109 ~~~l~~lh~~~i~H~dl~~~ni~~~~~~~~~l~--dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~---~~~~~~Di~  183 (256)
T cd06612         109 LKGLEYLHSNKKIHRDIKAGNILLNEEGQAKLA--DFGVSGQLTDTMAKRNTVIGTPFWMAPEVIQEI---GYNNKADIW  183 (256)
T ss_pred             HHHHHHHHHCCcccCCCCcceEEECCCCcEEEc--ccccchhcccCccccccccCCccccCHHHHhcC---CCCchhhHH
Confidence            346789999999999999999999999988888  999874332       12467789999998764   345789999


Q ss_pred             HHHHHHHHHHhCCCCCCCCCchhhhHHHHhh-ccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581         79 SFAVLLWELATREVPFADLTPMEVGMKVALE-GLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus        79 s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      ++|++++++++|+.||............... ......+...+..+.+++.+||+.+|++|||+.++++
T Consensus       184 s~G~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~  252 (256)
T cd06612         184 SLGITAIEMAEGKPPYSDIHPMRAIFMIPNKPPPTLSDPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQ  252 (256)
T ss_pred             HHHHHHHHHHhCCCCCCCcchhhhhhhhccCCCCCCCchhhcCHHHHHHHHHHHhcChhhCcCHHHHhc
Confidence            9999999999999999765544332222111 1122234456788999999999999999999999875

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=99.92  E-value=6.6e-25  Score=148.68  Aligned_cols=138  Identities=21%  Similarity=0.308  Sum_probs=103.6

Q ss_pred             hhHHhhhhcC-CCCCCCeeeeeeeeccccchhhccccccccccc------CCcccCCcccCccccccCCCCCCcchhhHH
Q psy12581          6 IVYSFYLNSK-KSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ------RGRCYYPAWMSPEALQKKPGDRNLEACDMW   78 (153)
Q Consensus         6 ~~~~~~lh~~-~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~------~~~~~~~~~~~pe~~~~~~~~~~~~~~dv~   78 (153)
                      .-++.|||+. ++.|+||.+.||+++.++.+++.  |||++...      ....++..|++||.+.+.....++.++|+|
T Consensus       117 ~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~--dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~  194 (288)
T cd06616         117 VKALNYLKEELKIIHRDVKPSNILLDRNGNIKLC--DFGISGQLVDSIAKTRDAGCRPYMAPERIDPSARDGYDVRSDVW  194 (288)
T ss_pred             HHHHHHHhhcCCeeccCCCHHHEEEccCCcEEEe--ecchhHHhccCCccccccCccCccCHHHhccccccCCcchhhhh
Confidence            3467899974 99999999999999999988888  99987432      223577889999998754222456889999


Q ss_pred             HHHHHHHHHHhCCCCCCCCCchh-hhHHHHhhcccc----CCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581         79 SFAVLLWELATREVPFADLTPME-VGMKVALEGLRI----TIPPGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus        79 s~g~~~~~~~~g~~p~~~~~~~~-~~~~~~~~~~~~----~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      |+|++++++++|+.||....... ...... ....+    ..+...+..+.+++.+||+.+|++|||++++++
T Consensus       195 slG~il~el~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~  266 (288)
T cd06616         195 SLGITLYEVATGKFPYPKWNSVFDQLTQVV-KGDPPILSNSEEREFSPSFVNFINLCLIKDESKRPKYKELLE  266 (288)
T ss_pred             HHHHHHHHHHhCCCCchhcchHHHHHhhhc-CCCCCcCCCcCCCccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            99999999999999997654211 111111 11111    112347889999999999999999999999875

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=99.92  E-value=1e-25  Score=154.92  Aligned_cols=131  Identities=17%  Similarity=0.203  Sum_probs=106.4

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc-------CCcccCCcccCccccccCCCCCCcchhhH
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ-------RGRCYYPAWMSPEALQKKPGDRNLEACDM   77 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~-------~~~~~~~~~~~pe~~~~~~~~~~~~~~dv   77 (153)
                      ..-++.|||++++.|+||++.||+++.++.+|+.  |||++...       ....+++.|++||.+.+.   .++.++|+
T Consensus       105 i~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~kl~--Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~Di  179 (321)
T cd05603         105 VASAIGYLHSLNIIYRDLKPENILLDSQGHVVLT--DFGLCKEGVEPEETTSTFCGTPEYLAPEVLRKE---PYDRTVDW  179 (321)
T ss_pred             HHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEc--cCCCCccCCCCCCccccccCCcccCCHHHhcCC---CCCCcCcc
Confidence            4456899999999999999999999999988888  99987431       223678899999998764   34578999


Q ss_pred             HHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHH
Q psy12581         78 WSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFD  142 (153)
Q Consensus        78 ~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~  142 (153)
                      ||+|+++|++++|..||.+.+.......+...  ....|...+..+.+++.+||+.+|++|+++.
T Consensus       180 wslG~il~el~~g~~pf~~~~~~~~~~~i~~~--~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~  242 (321)
T cd05603         180 WCLGAVLYEMLYGLPPFYSRDVSQMYDNILHK--PLQLPGGKTVAACDLLVGLLHKDQRRRLGAK  242 (321)
T ss_pred             cccchhhhhhhcCCCCCCCCCHHHHHHHHhcC--CCCCCCCCCHHHHHHHHHHccCCHhhcCCCC
Confidence            99999999999999999887655544444333  3445667888999999999999999999753

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=99.92  E-value=1.8e-25  Score=156.32  Aligned_cols=141  Identities=18%  Similarity=0.237  Sum_probs=110.8

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc--------CCcccCCcccCccccccCCC-CCCcchh
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ--------RGRCYYPAWMSPEALQKKPG-DRNLEAC   75 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~--------~~~~~~~~~~~pe~~~~~~~-~~~~~~~   75 (153)
                      ...++.|||+++|.|+||++.||+++.++.+||.  |||++...        ....||+.|+|||.+.+... ..++.++
T Consensus       151 il~aL~~LH~~~IvHrDLKp~NILl~~~~~~kL~--DFG~a~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~  228 (370)
T cd05621         151 VVLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLA--DFGTCMKMDETGMVRCDTAVGTPDYISPEVLKSQGGDGYYGREC  228 (370)
T ss_pred             HHHHHHHHHHCCeEecCCCHHHEEECCCCCEEEE--ecccceecccCCceecccCCCCcccCCHHHHhccCCCCCCCccc
Confidence            4567899999999999999999999999999998  99998432        23468999999999875432 2256789


Q ss_pred             hHHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCCC--CCCHHHHHHHHHHhcCCCCC--CCCHHHHHHH
Q psy12581         76 DMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPP--GISSHLSKLIRICMNEDPGK--RPTFDMVLPI  147 (153)
Q Consensus        76 dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~cl~~~p~~--Rps~~~~l~~  147 (153)
                      |+||+|+++|++++|..||.+.........+.........|.  ..+..+.+++.+|+..++..  |+++.++++.
T Consensus       229 DiwSlG~ilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~h  304 (370)
T cd05621         229 DWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKNSLNFPEDVEISKHAKNLICAFLTDREVRLGRNGVEEIKQH  304 (370)
T ss_pred             CEEeehHHHHHHHhCCCCCCCCCHHHHHHHHHhCCcccCCCCcccCCHHHHHHHHHHccCchhccCCCCHHHHhcC
Confidence            999999999999999999988776665555554333333443  46889999999999865543  8899988753

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>KOG0595|consensus

Probab=99.92  E-value=4.1e-25  Score=149.89  Aligned_cols=136  Identities=19%  Similarity=0.301  Sum_probs=107.6

Q ss_pred             hhHHhhhhcCCCCCCCeeeeeeeeccc-cc---hhhccccccccccc------CCcccCCcccCccccccCCCCCCcchh
Q psy12581          6 IVYSFYLNSKKSKTSNAFLFCCQIDED-LT---ARINMADAQFSFQQ------RGRCYYPAWMSPEALQKKPGDRNLEAC   75 (153)
Q Consensus         6 ~~~~~~lh~~~i~~~ni~~~~~~~~~~-~~---~kl~~~d~g~~~~~------~~~~~~~~~~~pe~~~~~~~~~~~~~~   75 (153)
                      +-++++||+++|+|+|+++.||+++.. +.   +.+++.|||++...      .+.||++.|||||++...   .++.++
T Consensus       119 A~alq~L~~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L~~~~~a~tlcGSplYMAPEV~~~~---~YdAKA  195 (429)
T KOG0595|consen  119 ASALQFLHENNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFARFLQPGSMAETLCGSPLYMAPEVIMSQ---QYDAKA  195 (429)
T ss_pred             HHHHHHHHHCCeeeccCCcceEEeccCCCCCCCceEEecccchhhhCCchhHHHHhhCCccccCHHHHHhc---cccchh
Confidence            457899999999999999999999875 22   45556699999654      345999999999999764   455899


Q ss_pred             hHHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhcc-ccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHH
Q psy12581         76 DMWSFAVLLWELATREVPFADLTPMEVGMKVALEGL-RITIPPGISSHLSKLIRICMNEDPGKRPTFDMV  144 (153)
Q Consensus        76 dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~  144 (153)
                      |+||+|+++|++++|+.||......+....+-.... .+..+...+....+++...+..++.+|.++.+-
T Consensus       196 DLWSiG~Ilyq~l~g~~Pf~a~t~~eL~~~~~k~~~~~~~~~~~~s~~~~~Ll~~ll~~~~~~~~~~~~~  265 (429)
T KOG0595|consen  196 DLWSIGTILYQCLTGKPPFDAETPKELLLYIKKGNEIVPVLPAELSNPLRELLISLLQRNPKDRISFEDF  265 (429)
T ss_pred             hHHHHHHHHHHHHhCCCCccccCHHHHHHHHhccccccCchhhhccCchhhhhhHHHhcCccccCchHHh
Confidence            999999999999999999998888877665443333 233345567777899999999999998876643

>KOG2345|consensus

Probab=99.92  E-value=4.7e-25  Score=141.43  Aligned_cols=143  Identities=20%  Similarity=0.233  Sum_probs=108.1

Q ss_pred             HHhhhhcCC--CCCCCeeeeeeeeccccchhhccccccccccc----------------CCcccCCcccCccccccCCCC
Q psy12581          8 YSFYLNSKK--SKTSNAFLFCCQIDEDLTARINMADAQFSFQQ----------------RGRCYYPAWMSPEALQKKPGD   69 (153)
Q Consensus         8 ~~~~lh~~~--i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~----------------~~~~~~~~~~~pe~~~~~~~~   69 (153)
                      ++++||...  +-|+||++.||+++.++.+++.  |||.+...                .....|..|.|||.+.-..+.
T Consensus       139 gL~~lH~~~~~yAH~DiKP~NILls~~~~~vl~--D~GS~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~  216 (302)
T KOG2345|consen  139 GLEALHEKEPPYAHRDIKPANILLSDSGLPVLM--DLGSATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHC  216 (302)
T ss_pred             HHHHHhccCCcccccCCCcceeEecCCCceEEE--eccCccccceEeechHHHHHHHHHHHHhCCCcccCchheecccCc
Confidence            567888776  7778888888888988888888  99987332                122457789999998765555


Q ss_pred             CCcchhhHHHHHHHHHHHHhCCCCCCCCCc--hhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHH
Q psy12581         70 RNLEACDMWSFAVLLWELATREVPFADLTP--MEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPI  147 (153)
Q Consensus        70 ~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~  147 (153)
                      ..+.++|+||+||++|+++.|..||.....  ......+....+..+.....+..+.++++.|++.||.+||++.+++..
T Consensus       217 ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~GgSlaLAv~n~q~s~P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~  296 (302)
T KOG2345|consen  217 TITERTDIWSLGCTLYAMMFGESPFERIYQQGGSLALAVQNAQISIPNSSRYSEALHQLIKSMLQVDPNQRPTIPELLSK  296 (302)
T ss_pred             ccccccchhhhhHHHHHHHHcCCcchHHhhcCCeEEEeeeccccccCCCCCccHHHHHHHHHHhcCCcccCCCHHHHHHH
Confidence            677899999999999999999999953221  111112222333444444588999999999999999999999999999


Q ss_pred             Hhhhh
Q psy12581        148 LDKMK  152 (153)
Q Consensus       148 L~~~~  152 (153)
                      ++.+.
T Consensus       297 ~d~Li  301 (302)
T KOG2345|consen  297 LDDLI  301 (302)
T ss_pred             HHhhc
Confidence            88764

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=99.92  E-value=1.5e-24  Score=148.76  Aligned_cols=139  Identities=18%  Similarity=0.253  Sum_probs=108.4

Q ss_pred             hhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc---CCcccCCcccCccccccCCCCCCcchhhHHHHHH
Q psy12581          6 IVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ---RGRCYYPAWMSPEALQKKPGDRNLEACDMWSFAV   82 (153)
Q Consensus         6 ~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~---~~~~~~~~~~~pe~~~~~~~~~~~~~~dv~s~g~   82 (153)
                      +-+..|||++++.|+|+.+.||+++.++.+++.  |||.+...   ....++..|++||.+.......++.++|+||+|+
T Consensus       131 ~~al~~LH~~gi~H~dl~p~nili~~~~~~kL~--dfg~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGv  208 (313)
T cd06633         131 LQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLA--DFGSASKSSPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGI  208 (313)
T ss_pred             HHHHHHHHHCCeecCCCChhhEEECCCCCEEEe--ecCCCcccCCCCCccccccccChhhccccCCCCCCchhhHHHHHH
Confidence            446789999999999999999999999988888  99987433   2346778899999985422234567899999999


Q ss_pred             HHHHHHhCCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581         83 LLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus        83 ~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      +++++++|..||.........................+..+.+++.+||+.+|.+||++.+++.
T Consensus       209 il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~  272 (313)
T cd06633         209 TCIELAERKPPLFNMNAMSALYHIAQNDSPTLQSNEWTDSFRGFVDYCLQKIPQERPASAELLR  272 (313)
T ss_pred             HHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            9999999999998766555444443322222223446778999999999999999999999885

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=99.92  E-value=7.2e-25  Score=148.73  Aligned_cols=140  Identities=19%  Similarity=0.285  Sum_probs=107.5

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc-------CCcccCCcccCccccccCCC--CCCcchh
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ-------RGRCYYPAWMSPEALQKKPG--DRNLEAC   75 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~-------~~~~~~~~~~~pe~~~~~~~--~~~~~~~   75 (153)
                      ...++.|||++++.|+||.+.||+++.++.+++.  |||.+...       ....++..|++||.+.....  ...+.++
T Consensus       137 i~~al~~lH~~~ivH~dlkp~nili~~~~~~kl~--dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~  214 (291)
T cd06639         137 ALLGLQHLHNNRIIHRDVKGNNILLTTEGGVKLV--DFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQYDYSYDARC  214 (291)
T ss_pred             HHHHHHHHHhCCeeccCCCHHHEEEcCCCCEEEe--ecccchhcccccccccCccCCccccChhhhcCCCCcccccCCcc
Confidence            3457789999999999999999999999988888  99987432       22356778999998764321  1246789


Q ss_pred             hHHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhcc-ccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581         76 DMWSFAVLLWELATREVPFADLTPMEVGMKVALEGL-RITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus        76 dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      |+||+|++++++++|+.||...........+..... ....+...+..+.+++.+||+.+|++||++.++++
T Consensus       215 Di~slGvi~~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~  286 (291)
T cd06639         215 DVWSLGITAIELGDGDPPLFDMHPVKTLFKIPRNPPPTLLHPEKWCRSFNHFISQCLIKDFEARPSVTHLLE  286 (291)
T ss_pred             chHHHHHHHHHHhhCCCCCCCCcHHHHHHHHhcCCCCCCCcccccCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence            999999999999999999987665444333322211 22234456778999999999999999999999875

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=99.92  E-value=8.2e-26  Score=155.91  Aligned_cols=139  Identities=17%  Similarity=0.186  Sum_probs=109.2

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccccC--------CcccCCcccCccccccCC---CCCCcc
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQR--------GRCYYPAWMSPEALQKKP---GDRNLE   73 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~--------~~~~~~~~~~pe~~~~~~---~~~~~~   73 (153)
                      ..-++.|||++++.|+||.+.||+++.++.+|+.  |||++....        ...+++.|++||.+....   ...++.
T Consensus       111 i~~aL~~lH~~~i~H~Dlkp~NIll~~~~~~kL~--Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~  188 (330)
T cd05601         111 LVLAIHSVHQMGYVHRDIKPENVLIDRTGHIKLA--DFGSAARLTANKMVNSKLPVGTPDYIAPEVLTTMNGDGKGTYGV  188 (330)
T ss_pred             HHHHHHHHHHCCeEcccCchHheEECCCCCEEec--cCCCCeECCCCCceeeecccCCccccCHHHhccccccccCCCCC
Confidence            3457789999999999999999999999999888  999884321        235788999999986321   123557


Q ss_pred             hhhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCC--CCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581         74 ACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIP--PGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus        74 ~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      ++|+||+|+++|++++|..||...........+.........|  ...+..+.+++.+||. +|++||+++++++
T Consensus       189 ~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~  262 (330)
T cd05601         189 ECDWWSLGVIAYEMIYGRSPFHEGTSAKTYNNIMNFQRFLKFPEDPKVSSDFLDLIQSLLC-GQKERLGYEGLCC  262 (330)
T ss_pred             cceeecccceeeeeccCCCCCCCCCHHHHHHHHHcCCCccCCCCCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhC
Confidence            8999999999999999999998776655555544332222223  3578899999999998 9999999999874

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=99.92  E-value=1.4e-24  Score=146.08  Aligned_cols=135  Identities=24%  Similarity=0.399  Sum_probs=106.9

Q ss_pred             hhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc-------CCcccCCcccCccccccCCCCCCcchhhHH
Q psy12581          6 IVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ-------RGRCYYPAWMSPEALQKKPGDRNLEACDMW   78 (153)
Q Consensus         6 ~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~-------~~~~~~~~~~~pe~~~~~~~~~~~~~~dv~   78 (153)
                      .-+..|||++++.|+||.++||+++.++.+++.  |||.+...       ....++..|++||.+.+.   .++.++|+|
T Consensus       108 ~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~--d~g~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~---~~~~~sDv~  182 (274)
T cd06609         108 LLGLEYLHEEGKIHRDIKAANILLSEEGDVKLA--DFGVSGQLTSTMSKRNTFVGTPFWMAPEVIKQS---GYDEKADIW  182 (274)
T ss_pred             HHHHHHHHhCCcccCCCCHHHEEECCCCCEEEc--ccccceeecccccccccccCCccccChhhhccC---CCCchhhHH
Confidence            346789999999999999999999999988888  99987332       223567789999998764   355889999


Q ss_pred             HHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCCCC-CCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581         79 SFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPG-ISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus        79 s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      ++|+++|++++|..||...........+. ....+..+.. .+..+.+++.+||..+|++||+++++++
T Consensus       183 slG~il~~l~tg~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~l~~~p~~Rpt~~~il~  250 (274)
T cd06609         183 SLGITAIELAKGEPPLSDLHPMRVLFLIP-KNNPPSLEGNKFSKPFKDFVSLCLNKDPKERPSAKELLK  250 (274)
T ss_pred             HHHHHHHHHHhCCCCcccCchHHHHHHhh-hcCCCCCcccccCHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence            99999999999999997765444333222 2223333444 7889999999999999999999999974

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=99.92  E-value=1.3e-24  Score=147.02  Aligned_cols=138  Identities=15%  Similarity=0.133  Sum_probs=103.5

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc-------CCcccCCcccCccccccCCCCCCcchhhH
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ-------RGRCYYPAWMSPEALQKKPGDRNLEACDM   77 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~-------~~~~~~~~~~~pe~~~~~~~~~~~~~~dv   77 (153)
                      ..-++.|||++++.|+||.+.||+++.++.+++.  |||++...       ....+++.|++||.+.+.  ..++.++|+
T Consensus       110 i~~~L~~lH~~~i~H~dl~p~nil~~~~~~~~l~--dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~~Dv  185 (285)
T cd07861         110 ILQGILFCHSRRVLHRDLKPQNLLIDNKGVIKLA--DFGLARAFGIPVRVYTHEVVTLWYRAPEVLLGS--PRYSTPVDI  185 (285)
T ss_pred             HHHHHHHHHhCCeeecCCCHHHEEEcCCCcEEEC--cccceeecCCCcccccCCcccccccChHHhcCC--CCcCcHHHH
Confidence            3456799999999999999999999999998888  99987432       123457889999987643  234578999


Q ss_pred             HHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhc---------------------------cccCCCCCCCHHHHHHHHHH
Q psy12581         78 WSFAVLLWELATREVPFADLTPMEVGMKVALEG---------------------------LRITIPPGISSHLSKLIRIC  130 (153)
Q Consensus        78 ~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~~~~~~~l~~~c  130 (153)
                      ||+|++++++++|+.||.+..............                           .........+.++.+++.+|
T Consensus       186 ~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  265 (285)
T cd07861         186 WSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSLPDYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKM  265 (285)
T ss_pred             HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcchhhHHHHhhccccCcchhHHhcCCCCHHHHHHHHHH
Confidence            999999999999999997654433222111100                           00001234678899999999


Q ss_pred             hcCCCCCCCCHHHHHH
Q psy12581        131 MNEDPGKRPTFDMVLP  146 (153)
Q Consensus       131 l~~~p~~Rps~~~~l~  146 (153)
                      |+.||++|||+.++++
T Consensus       266 l~~dP~~Rpt~~~ll~  281 (285)
T cd07861         266 LIYDPAKRISAKKALN  281 (285)
T ss_pred             hcCChhhCCCHHHHhc
Confidence            9999999999999875

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>PHA03212 serine/threonine kinase US3; Provisional

Probab=99.92  E-value=6.9e-25  Score=154.32  Aligned_cols=137  Identities=19%  Similarity=0.142  Sum_probs=100.4

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc--------CCcccCCcccCccccccCCCCCCcchhh
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ--------RGRCYYPAWMSPEALQKKPGDRNLEACD   76 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~--------~~~~~~~~~~~pe~~~~~~~~~~~~~~d   76 (153)
                      ..-++.|||+++|.|+||++.||+++.++.++|.  |||++...        ....||+.|++||.+.+.   .++.++|
T Consensus       191 i~~aL~ylH~~~IvHrDiKP~NIll~~~~~vkL~--DFG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~D  265 (391)
T PHA03212        191 VLRAIQYLHENRIIHRDIKAENIFINHPGDVCLG--DFGAACFPVDINANKYYGWAGTIATNAPELLARD---PYGPAVD  265 (391)
T ss_pred             HHHHHHHHHhCCcccCCCChHhEEEcCCCCEEEE--eCCcccccccccccccccccCccCCCChhhhcCC---CCCcHHH
Confidence            3457899999999999999999999999988888  99998421        123689999999998764   3458999


Q ss_pred             HHHHHHHHHHHHhCCCCCCCCCc-------hhhhHHHHh--------------------------hcccc--CCC-----
Q psy12581         77 MWSFAVLLWELATREVPFADLTP-------MEVGMKVAL--------------------------EGLRI--TIP-----  116 (153)
Q Consensus        77 v~s~g~~~~~~~~g~~p~~~~~~-------~~~~~~~~~--------------------------~~~~~--~~~-----  116 (153)
                      +||+|+++|++++|..|+.+...       ......+..                          .....  ..+     
T Consensus       266 iwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  345 (391)
T PHA03212        266 IWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDAQANLDEIYIGLAKKSSRKPGSRPLWTNL  345 (391)
T ss_pred             HHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcchhHHHHHHHHHHHhccCCCCCCCCCHHHH
Confidence            99999999999999887643211       011111100                          00000  000     


Q ss_pred             CCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581        117 PGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus       117 ~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      ...+.++.+++.+||+.||++|||++++++
T Consensus       346 ~~~~~~l~~Li~~mL~~dP~~Rpta~elL~  375 (391)
T PHA03212        346 YELPIDLEYLICKMLAFDAHHRPSAEALLD  375 (391)
T ss_pred             hhhhhhHHHHHHHHhcCChhhCCCHHHHhc
Confidence            123557889999999999999999999984

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=99.92  E-value=2.3e-24  Score=144.76  Aligned_cols=142  Identities=22%  Similarity=0.378  Sum_probs=107.0

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc---------CCcccCCcccCccccccCCC----CCC
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ---------RGRCYYPAWMSPEALQKKPG----DRN   71 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~---------~~~~~~~~~~~pe~~~~~~~----~~~   71 (153)
                      .+-++.|||++++.|+||.+.||+++.++.+++.  |||++...         ....++..|++||.+.....    ...
T Consensus       108 i~~al~~lH~~~i~H~dikp~nil~~~~~~~~l~--Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~  185 (268)
T cd05086         108 IAAGVTHMHKHNFLHSDLALRNCFLTSDLTVKVG--DYGIGPSRYKEDYIETEDDKCVPLRWLAPELVGEFHGGLITAEQ  185 (268)
T ss_pred             HHHHHHHHHHCCeeccCCccceEEEcCCccEEec--ccccccccCcchhhhcccCCcCcccccCchhcccccCccccCCC
Confidence            3456799999999999999999999999988888  99987421         22356778999998753211    124


Q ss_pred             cchhhHHHHHHHHHHHHh-CCCCCCCCCchhhhHHHHhhcc----ccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581         72 LEACDMWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGL----RITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus        72 ~~~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      +.++|+||+|++++++++ |..||.................    .+..+...+..+.+++..|| .+|++||+++++++
T Consensus       186 ~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~  264 (268)
T cd05086         186 TKPSNVWALGVTLWELFENAAQPYSHLSDREVLNHVIKDQQVKLFKPQLELPYSERWYEVLQFCW-LSPEKRATAEEVHR  264 (268)
T ss_pred             CCcchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhhcccccCCCccCCCCcHHHHHHHHHHh-hCcccCCCHHHHHH
Confidence            578999999999999986 6778877665554444333221    22234457788999999999 57999999999998


Q ss_pred             HHh
Q psy12581        147 ILD  149 (153)
Q Consensus       147 ~L~  149 (153)
                      .|.
T Consensus       265 ~l~  267 (268)
T cd05086         265 LLT  267 (268)
T ss_pred             Hhc
Confidence            875

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=99.92  E-value=2.1e-24  Score=146.55  Aligned_cols=139  Identities=23%  Similarity=0.329  Sum_probs=106.2

Q ss_pred             hhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc-------CCcccCCcccCccccccCC--CCCCcchhh
Q psy12581          6 IVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ-------RGRCYYPAWMSPEALQKKP--GDRNLEACD   76 (153)
Q Consensus         6 ~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~-------~~~~~~~~~~~pe~~~~~~--~~~~~~~~d   76 (153)
                      .-+..|||++++.|+|+.+.||+++.++.+++.  |||.+...       ....++..|++||.+....  ...++.++|
T Consensus       120 ~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~--dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~D  197 (292)
T cd06644         120 LEALQYLHSMKIIHRDLKAGNVLLTLDGDIKLA--DFGVSAKNVKTLQRRDSFIGTPYWMAPEVVMCETMKDTPYDYKAD  197 (292)
T ss_pred             HHHHHHHhcCCeeecCCCcceEEEcCCCCEEEc--cCccceeccccccccceecCCccccCceeeccccccCCCCCchhh
Confidence            346789999999999999999999999988888  99987432       1224677899999985321  223567899


Q ss_pred             HHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhcc-ccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581         77 MWSFAVLLWELATREVPFADLTPMEVGMKVALEGL-RITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus        77 v~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      +||+|+++|++++|..||................. ....+...+..+.+++.+||..+|++||+++++++
T Consensus       198 v~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~  268 (292)
T cd06644         198 IWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLSQPSKWSMEFRDFLKTALDKHPETRPSAAQLLE  268 (292)
T ss_pred             hHhHHHHHHHHhcCCCCCccccHHHHHHHHhcCCCccCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence            99999999999999999977654443333221111 22234567789999999999999999999999975

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=99.92  E-value=7e-25  Score=148.05  Aligned_cols=138  Identities=18%  Similarity=0.233  Sum_probs=105.1

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc-----CCcccCCcccCccccccCCCCCCcchhhHHH
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ-----RGRCYYPAWMSPEALQKKPGDRNLEACDMWS   79 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~-----~~~~~~~~~~~pe~~~~~~~~~~~~~~dv~s   79 (153)
                      ..-++.|||++++.|+||.+.||+++.++.+++.  |||++...     ....++..|++||.+.+.   ..+.++|+||
T Consensus       104 i~~~l~~lH~~~i~H~dlkp~Nill~~~~~~~l~--dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Dvws  178 (279)
T cd06619         104 VVKGLTYLWSLKILHRDVKPSNMLVNTRGQVKLC--DFGVSTQLVNSIAKTYVGTNAYMAPERISGE---QYGIHSDVWS  178 (279)
T ss_pred             HHHHHHHHHHCCEeeCCCCHHHEEECCCCCEEEe--eCCcceecccccccCCCCChhhcCceeecCC---CCCCcchHHH
Confidence            4556799999999999999999999999998888  99987432     234678899999998754   3457899999


Q ss_pred             HHHHHHHHHhCCCCCCCCCchh------hhHHHHhhccccCC-CCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHH
Q psy12581         80 FAVLLWELATREVPFADLTPME------VGMKVALEGLRITI-PPGISSHLSKLIRICMNEDPGKRPTFDMVLPI  147 (153)
Q Consensus        80 ~g~~~~~~~~g~~p~~~~~~~~------~~~~~~~~~~~~~~-~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~  147 (153)
                      +|+++|++++|+.||.......      .............. ....+..+.+++.+||+.+|++||+++++++.
T Consensus       179 lG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~  253 (279)
T cd06619         179 LGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDEDPPVLPVGQFSEKFVHFITQCMRKQPKERPAPENLMDH  253 (279)
T ss_pred             HHHHHHHHHhCCCCchhhcccccccchHHHHHHHhccCCCCCCCCcCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence            9999999999999986532211      11111111111222 23467889999999999999999999998753

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.92  E-value=7.2e-25  Score=148.02  Aligned_cols=143  Identities=23%  Similarity=0.354  Sum_probs=109.6

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccccC----------CcccCCcccCccccccCCCCCCcch
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQR----------GRCYYPAWMSPEALQKKPGDRNLEA   74 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~----------~~~~~~~~~~pe~~~~~~~~~~~~~   74 (153)
                      ...++.|||++++.|+||.+.||+++.++.+++.  |||.+....          ...++..|++||.....   ..+.+
T Consensus       118 l~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~--dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~---~~~~~  192 (284)
T cd05038         118 ICKGMDYLGSQRYIHRDLAARNILVESEDLVKIS--DFGLAKVLPEDKDYYYVKEPGESPIFWYAPECLRTS---KFSSA  192 (284)
T ss_pred             HHHHHHHHHhCCeecCCCCHHhEEEcCCCCEEEc--ccccccccccCCcceeccCCCCCcccccCcHHHccC---CCCcc
Confidence            3456899999999999999999999999888888  999884432          11234568999988654   34578


Q ss_pred             hhHHHHHHHHHHHHhCCCCCCCCCchh--------------hhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCC
Q psy12581         75 CDMWSFAVLLWELATREVPFADLTPME--------------VGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPT  140 (153)
Q Consensus        75 ~dv~s~g~~~~~~~~g~~p~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps  140 (153)
                      +|+||+|++++++++|..|+.......              ............+.+...+..+.+++.+||..+|++||+
T Consensus       193 ~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt  272 (284)
T cd05038         193 SDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLELLKEGERLPRPPSCPDEVYDLMKLCWEAEPQDRPS  272 (284)
T ss_pred             cchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHHHHHHcCCcCCCCccCCHHHHHHHHHHhccChhhCCC
Confidence            999999999999999998875432111              111222233344445567789999999999999999999


Q ss_pred             HHHHHHHHhhhh
Q psy12581        141 FDMVLPILDKMK  152 (153)
Q Consensus       141 ~~~~l~~L~~~~  152 (153)
                      +.++++.|+++.
T Consensus       273 ~~ei~~~l~~i~  284 (284)
T cd05038         273 FADLILIVDRLR  284 (284)
T ss_pred             HHHHHHHHhhcC
Confidence            999999999863

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=99.92  E-value=3e-25  Score=155.31  Aligned_cols=141  Identities=18%  Similarity=0.230  Sum_probs=109.5

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc--------CCcccCCcccCccccccCCC-CCCcchh
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ--------RGRCYYPAWMSPEALQKKPG-DRNLEAC   75 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~--------~~~~~~~~~~~pe~~~~~~~-~~~~~~~   75 (153)
                      ...++.|||++++.|+||++.||+++.++.+|++  |||++...        ....||+.|+|||.+..... ..++.++
T Consensus       151 i~~aL~~LH~~~ivHrDLkp~NIll~~~~~ikL~--DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~  228 (371)
T cd05622         151 VVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLA--DFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGREC  228 (371)
T ss_pred             HHHHHHHHHHCCEEeCCCCHHHEEECCCCCEEEE--eCCceeEcCcCCcccccCcccCccccCHHHHhccCCCccCCCcc
Confidence            3457899999999999999999999999999988  99998432        23468999999999875432 2356789


Q ss_pred             hHHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCC--CCCCHHHHHHHHHHhcCCCCC--CCCHHHHHHH
Q psy12581         76 DMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIP--PGISSHLSKLIRICMNEDPGK--RPTFDMVLPI  147 (153)
Q Consensus        76 dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~cl~~~p~~--Rps~~~~l~~  147 (153)
                      |+||+|+++|++++|..||.+.........+.........|  ...+..+.+++.+||..++.+  |++++++++.
T Consensus       229 DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h  304 (371)
T cd05622         229 DWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRH  304 (371)
T ss_pred             ceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCcccCCCcCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcC
Confidence            99999999999999999998877665555555433223333  457899999999999844433  6788888764

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=99.92  E-value=4.3e-25  Score=149.58  Aligned_cols=137  Identities=19%  Similarity=0.208  Sum_probs=107.4

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc------CCcccCCcccCccccccCCCCCCcchhhHH
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ------RGRCYYPAWMSPEALQKKPGDRNLEACDMW   78 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~------~~~~~~~~~~~pe~~~~~~~~~~~~~~dv~   78 (153)
                      ..-+..|||+.++.|+||.+.||+++.++.+++.  |||++...      ....++..|++||.+.+.   .++.++|+|
T Consensus       111 i~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~--Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Diw  185 (285)
T cd05605         111 ITCGLEDLHRERIVYRDLKPENILLDDYGHIRIS--DLGLAVEIPEGETIRGRVGTVGYMAPEVVKNE---RYTFSPDWW  185 (285)
T ss_pred             HHHHHHHHHHCCcEecCCCHHHEEECCCCCEEEe--eCCCceecCCCCccccccCCCCccCcHHhcCC---CCCccccch
Confidence            3456799999999999999999999999988888  99988443      223678899999998754   345789999


Q ss_pred             HHHHHHHHHHhCCCCCCCCCchhhhHHHHh--hccccCCCCCCCHHHHHHHHHHhcCCCCCCC-----CHHHHHH
Q psy12581         79 SFAVLLWELATREVPFADLTPMEVGMKVAL--EGLRITIPPGISSHLSKLIRICMNEDPGKRP-----TFDMVLP  146 (153)
Q Consensus        79 s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----s~~~~l~  146 (153)
                      |+|+++|++++|..||.+.........+..  .......+...+..+.+++.+||..||++||     +++++++
T Consensus       186 s~G~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~  260 (285)
T cd05605         186 GLGCLIYEMIEGKSPFRQRKEKVKREEVERRVKEDQEEYSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKA  260 (285)
T ss_pred             hHHHHHHHHHHCCCCCCCCchhhHHHHHHHHhhhcccccCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhc
Confidence            999999999999999987554332211111  1223344566889999999999999999999     7888864

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=99.92  E-value=3.9e-25  Score=152.44  Aligned_cols=132  Identities=21%  Similarity=0.303  Sum_probs=103.5

Q ss_pred             chhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc-------CCcccCCcccCccccccCCCCCCcchhh
Q psy12581          4 KKIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ-------RGRCYYPAWMSPEALQKKPGDRNLEACD   76 (153)
Q Consensus         4 ~~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~-------~~~~~~~~~~~pe~~~~~~~~~~~~~~d   76 (153)
                      ...-++.|||++++.|+||++.||+++.++.+|+.  |||++...       ...+|++.|++||.+.+.   .++.++|
T Consensus       104 qi~~al~~lH~~~ivHrDlkp~Nili~~~~~~kl~--Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~D  178 (327)
T cd05617         104 EICIALNFLHERGIIYRDLKLDNVLLDADGHIKLT--DYGMCKEGLGPGDTTSTFCGTPNYIAPEILRGE---EYGFSVD  178 (327)
T ss_pred             HHHHHHHHHHHCCeeccCCCHHHEEEeCCCCEEEe--ccccceeccCCCCceecccCCcccCCHHHHCCC---CCCchhe
Confidence            34567899999999999999999999999998888  99987431       234688999999998764   3457899


Q ss_pred             HHHHHHHHHHHHhCCCCCCCCC------chhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCH
Q psy12581         77 MWSFAVLLWELATREVPFADLT------PMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTF  141 (153)
Q Consensus        77 v~s~g~~~~~~~~g~~p~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~  141 (153)
                      +||+|+++|++++|..||....      ......... .......|...+..+.+++.+||+.||++|+++
T Consensus       179 iwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~-~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~  248 (327)
T cd05617         179 WWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVI-LEKPIRIPRFLSVKASHVLKGFLNKDPKERLGC  248 (327)
T ss_pred             eehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHH-HhCCCCCCCCCCHHHHHHHHHHhccCHHHcCCC
Confidence            9999999999999999996422      111122222 122344677788999999999999999999984

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>KOG0603|consensus

Probab=99.92  E-value=3.9e-25  Score=156.93  Aligned_cols=135  Identities=19%  Similarity=0.179  Sum_probs=110.4

Q ss_pred             chhhHHhhhhcCCCCCCCeeeeeeee-ccccchhhcccccccccccCCc----ccCCcccCccccccCCCCCCcchhhHH
Q psy12581          4 KKIVYSFYLNSKKSKTSNAFLFCCQI-DEDLTARINMADAQFSFQQRGR----CYYPAWMSPEALQKKPGDRNLEACDMW   78 (153)
Q Consensus         4 ~~~~~~~~lh~~~i~~~ni~~~~~~~-~~~~~~kl~~~d~g~~~~~~~~----~~~~~~~~pe~~~~~~~~~~~~~~dv~   78 (153)
                      .-.++.+|||..|+.|+|+++.||++ +..+++++.  |||.+......    +.|..|.|||.....   .++.++|+|
T Consensus       423 ~lv~Av~~LH~~gvvhRDLkp~NIL~~~~~g~lrlt--yFG~a~~~~~~~~tp~~t~~y~APEvl~~~---~yt~acD~W  497 (612)
T KOG0603|consen  423 ELVSAVDYLHEQGVVHRDLKPGNILLDGSAGHLRLT--YFGFWSELERSCDTPALTLQYVAPEVLAIQ---EYTEACDWW  497 (612)
T ss_pred             HHHHHHHHHHhcCeeecCCChhheeecCCCCcEEEE--EechhhhCchhhcccchhhcccChhhhccC---CCCcchhhH
Confidence            45678999999999999999999999 588888888  99998666544    667789999998843   566899999


Q ss_pred             HHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581         79 SFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus        79 s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      |+|+++|+|++|+.||............+   ..++....+|..+++++++||+.||.+|+++.++..
T Consensus       498 SLGvlLy~ML~G~tp~~~~P~~~ei~~~i---~~~~~s~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~  562 (612)
T KOG0603|consen  498 SLGVLLYEMLTGRTLFAAHPAGIEIHTRI---QMPKFSECVSDEAKDLLQQLLQVDPALRLGADEIGA  562 (612)
T ss_pred             HHHHHHHHHHhCCCccccCCchHHHHHhh---cCCccccccCHHHHHHHHHhccCChhhCcChhhhcc
Confidence            99999999999999997765553222221   233334789999999999999999999999998864

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=99.92  E-value=1.4e-24  Score=149.98  Aligned_cols=136  Identities=19%  Similarity=0.251  Sum_probs=100.9

Q ss_pred             hhHHhhhhcC-CCCCCCeeeeeeeeccccchhhccccccccccc-----CCcccCCcccCccccccCCCCCCcchhhHHH
Q psy12581          6 IVYSFYLNSK-KSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ-----RGRCYYPAWMSPEALQKKPGDRNLEACDMWS   79 (153)
Q Consensus         6 ~~~~~~lh~~-~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~-----~~~~~~~~~~~pe~~~~~~~~~~~~~~dv~s   79 (153)
                      .-+..|||++ ++.|+||++.||+++.++.+|+.  |||++...     ....++..|++||.+.+.   ..+.++|+||
T Consensus       113 ~~~l~~lH~~~~ivH~dlkp~Nili~~~~~~kL~--Dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Dvws  187 (333)
T cd06650         113 IKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLC--DFGVSGQLIDSMANSFVGTRSYMSPERLQGT---HYSVQSDIWS  187 (333)
T ss_pred             HHHHHHHHhcCCEEecCCChhhEEEcCCCCEEEe--eCCcchhhhhhccccCCCCccccCHHHhcCC---CCCcHHHHHH
Confidence            4467899975 79999999999999999988888  99987432     233678899999998764   3457899999


Q ss_pred             HHHHHHHHHhCCCCCCCCCchhhhHH-------------------------------------------HHhhccccCCC
Q psy12581         80 FAVLLWELATREVPFADLTPMEVGMK-------------------------------------------VALEGLRITIP  116 (153)
Q Consensus        80 ~g~~~~~~~~g~~p~~~~~~~~~~~~-------------------------------------------~~~~~~~~~~~  116 (153)
                      +|+++|++++|+.||...........                                           .......+..+
T Consensus       188 lG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (333)
T cd06650         188 MGLSLVEMAIGRYPIPPPDAKELELMFGCPVEGDPAESETSPRPRPPGRPLSSYGPDSRPPMAIFELLDYIVNEPPPKLP  267 (333)
T ss_pred             HHHHHHHHHHCCCCCCCcchhHHHHHhcCcccCCccccccCcccCCccchhhhhcccccccccHHHHHHHHhcCCCccCC
Confidence            99999999999999865432211100                                           00000011111


Q ss_pred             -CCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581        117 -PGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus       117 -~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                       ...+.++.+++.+||+.||++|||++++++
T Consensus       268 ~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~  298 (333)
T cd06650         268 SGVFGAEFQDFVNKCLIKNPAERADLKQLMV  298 (333)
T ss_pred             CCCcCHHHHHHHHHhccCCcccCcCHHHHhh
Confidence             125678999999999999999999999964

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=99.92  E-value=8.3e-26  Score=155.90  Aligned_cols=137  Identities=16%  Similarity=0.179  Sum_probs=106.5

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc-------CCcccCCcccCccccccCCCCCCcchhhH
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ-------RGRCYYPAWMSPEALQKKPGDRNLEACDM   77 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~-------~~~~~~~~~~~pe~~~~~~~~~~~~~~dv   77 (153)
                      ..-++.|||++++.|+||++.||+++.++.+++.  |||++...       ...+|++.|++||.+.+..  .++.++|+
T Consensus       105 il~al~~LH~~~ivHrDlkp~Nili~~~~~~kl~--Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~~Dv  180 (330)
T cd05586         105 LVLALEHLHKYDIVYRDLKPENILLDATGHIALC--DFGLSKANLTDNKTTNTFCGTTEYLAPEVLLDEK--GYTKHVDF  180 (330)
T ss_pred             HHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEe--cCCcCcCCCCCCCCccCccCCccccCHHHHcCCC--CCCCccce
Confidence            3456899999999999999999999999988888  99987431       2346889999999986432  24578999


Q ss_pred             HHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCC----CHHHHHH
Q psy12581         78 WSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRP----TFDMVLP  146 (153)
Q Consensus        78 ~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp----s~~~~l~  146 (153)
                      ||+|+++|++++|..||.+.........+.......+ ....+..+.+++.+||..+|++||    ++.++++
T Consensus       181 wslGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~  252 (330)
T cd05586         181 WSLGVLVFEMCCGWSPFYAEDTQQMYRNIAFGKVRFP-KNVLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKE  252 (330)
T ss_pred             eccccEEEEeccCCCCCCCCCHHHHHHHHHcCCCCCC-CccCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhc
Confidence            9999999999999999987665554444433322221 234688999999999999999998    4666554

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.92  E-value=1.8e-24  Score=144.89  Aligned_cols=139  Identities=23%  Similarity=0.364  Sum_probs=100.7

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccch-----hhccccccccccc---CCcccCCcccCccccccCCCCCCcchhh
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTA-----RINMADAQFSFQQ---RGRCYYPAWMSPEALQKKPGDRNLEACD   76 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~-----kl~~~d~g~~~~~---~~~~~~~~~~~pe~~~~~~~~~~~~~~d   76 (153)
                      ..-+..|||++++.|+||.+.||+++.++..     .+.+.|||.+...   ....++..|++||.+...  ..++.++|
T Consensus       114 i~~~l~~lH~~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~g~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~~D  191 (262)
T cd05077         114 LASALSYLEDKDLVHGNVCTKNILLAREGIDGECGPFIKLSDPGIPITVLSRQECVERIPWIAPECVEDS--KNLSIAAD  191 (262)
T ss_pred             HHHHHHHhhhCCeECCCCCcccEEEecCCccCCCCceeEeCCCCCCccccCcccccccccccChhhhcCC--CCCCchhH
Confidence            3456789999999999999999999876641     1334499987433   233567889999987632  23557899


Q ss_pred             HHHHHHHHHHHH-hCCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHH
Q psy12581         77 MWSFAVLLWELA-TREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPIL  148 (153)
Q Consensus        77 v~s~g~~~~~~~-~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L  148 (153)
                      +||+|+++|+++ +|..|+......+.. ......  .......+..+.+++.+||+.||++||++.++++.+
T Consensus       192 iwslG~~l~el~~~~~~p~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~~  261 (262)
T cd05077         192 KWSFGTTLWEICYNGEIPLKDKTLAEKE-RFYEGQ--CMLVTPSCKELADLMTHCMNYDPNQRPFFRAIMRDI  261 (262)
T ss_pred             HHHHHHHHHHHHhCCCCCCCCcchhHHH-HHHhcC--ccCCCCChHHHHHHHHHHcCCChhhCcCHHHHHHhc
Confidence            999999999997 588888665433322 111111  112233457899999999999999999999998865

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=99.92  E-value=1.1e-24  Score=149.49  Aligned_cols=137  Identities=20%  Similarity=0.212  Sum_probs=108.2

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccccC-----------------------------------
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQR-----------------------------------   49 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~-----------------------------------   49 (153)
                      ..-++.|||.+++.|+||.++||+++.++.+++.  |||++....                                   
T Consensus       112 i~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~--dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  189 (316)
T cd05574         112 VLLALEYLHLLGIVYRDLKPENILLHESGHIMLS--DFDLSKQSDVEPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRS  189 (316)
T ss_pred             HHHHHHHHHHCCeeccCCChHHeEEcCCCCEEEe--ecchhhcccccccccccccccccccccccccchhhhcccccCCC
Confidence            4456789999999999999999999999988887  999873221                                   


Q ss_pred             -CcccCCcccCccccccCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHH
Q psy12581         50 -GRCYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIR  128 (153)
Q Consensus        50 -~~~~~~~~~~pe~~~~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  128 (153)
                       ...|+..|++||.+.+.   ..+.++|+||+|+++|++++|..||.+.........+.......+.....+..+.+++.
T Consensus       190 ~~~~g~~~y~aPE~~~~~---~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  266 (316)
T cd05574         190 NSFVGTEEYIAPEVISGD---GHGSAVDWWTLGILLYEMLYGTTPFKGSNRDETFSNILKKEVTFPGSPPVSSSARDLIR  266 (316)
T ss_pred             CCCcCccCCcCHHHHcCC---CCCchHHHHHHHHHHHHHhhCCCCCCCCchHHHHHHHhcCCccCCCccccCHHHHHHHH
Confidence             12467789999998754   34578999999999999999999998776665555544443333333336889999999


Q ss_pred             HHhcCCCCCCCC----HHHHHH
Q psy12581        129 ICMNEDPGKRPT----FDMVLP  146 (153)
Q Consensus       129 ~cl~~~p~~Rps----~~~~l~  146 (153)
                      +||+.+|++||+    ++++++
T Consensus       267 ~~l~~~p~~R~s~~~~~~~ll~  288 (316)
T cd05574         267 KLLVKDPSKRLGSKRGAAEIKQ  288 (316)
T ss_pred             HHccCCHhHCCCchhhHHHHHc
Confidence            999999999999    777765

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.92  E-value=2.8e-25  Score=155.13  Aligned_cols=136  Identities=16%  Similarity=0.225  Sum_probs=107.5

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccccC-----------------------------------
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQR-----------------------------------   49 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~-----------------------------------   49 (153)
                      ..-++.|||++++.|+||++.||+++.++.+++.  |||++....                                   
T Consensus       110 i~~aL~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~--Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (364)
T cd05599         110 TILAIDSIHKLGYIHRDIKPDNLLLDAKGHIKLS--DFGLCTGLKKSHRTEFYRILSHALPSNFLDFISKPMSSKRKAET  187 (364)
T ss_pred             HHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEe--ecccceeccccccccccccccccccccccccccccccccccccc
Confidence            4567899999999999999999999999999988  999873211                                   


Q ss_pred             ----------CcccCCcccCccccccCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCCC--
Q psy12581         50 ----------GRCYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPP--  117 (153)
Q Consensus        50 ----------~~~~~~~~~~pe~~~~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~--  117 (153)
                                ..+||+.|++||.+.+.   .++.++|+||+|+++|++++|..||.+.........+.........|.  
T Consensus       188 ~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwSlG~il~el~~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~  264 (364)
T cd05599         188 WKRNRRALAYSTVGTPDYIAPEVFLQT---GYNKECDWWSLGVIMYEMLVGYPPFCSDNPQETYRKIINWKETLQFPDEV  264 (364)
T ss_pred             hhhcccccccccccCccccCHHHHcCC---CCCCeeeeecchhHHHHhhcCCCCCCCCCHHHHHHHHHcCCCccCCCCCC
Confidence                      13589999999998764   345889999999999999999999988776555444443222233333  


Q ss_pred             CCCHHHHHHHHHHhcCCCCCCCC---HHHHHH
Q psy12581        118 GISSHLSKLIRICMNEDPGKRPT---FDMVLP  146 (153)
Q Consensus       118 ~~~~~~~~l~~~cl~~~p~~Rps---~~~~l~  146 (153)
                      ..++.+.+++.+|+. +|.+|++   ++++++
T Consensus       265 ~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~  295 (364)
T cd05599         265 PLSPEAKDLIKRLCC-EAERRLGNNGVNEIKS  295 (364)
T ss_pred             CCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhc
Confidence            468899999999997 8999997   888765

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=99.92  E-value=1.9e-24  Score=145.76  Aligned_cols=136  Identities=25%  Similarity=0.327  Sum_probs=107.2

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccccC-------CcccCCcccCccccccCCCCCCcchhhH
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQR-------GRCYYPAWMSPEALQKKPGDRNLEACDM   77 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~-------~~~~~~~~~~pe~~~~~~~~~~~~~~dv   77 (153)
                      ..-+..|||++++.|+||.++||+++.++.+++.  |||++....       ...++..|++||.+.+.   .++.++|+
T Consensus       110 i~~~l~~lH~~~ivH~dl~p~ni~i~~~~~~~l~--dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Dv  184 (277)
T cd06642         110 ILKGLDYLHSERKIHRDIKAANVLLSEQGDVKLA--DFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQS---AYDFKADI  184 (277)
T ss_pred             HHHHHHHHhcCCeeccCCChheEEEeCCCCEEEc--cccccccccCcchhhhcccCcccccCHHHhCcC---CCchhhhH
Confidence            3456789999999999999999999999988888  999874322       12467789999998764   34578999


Q ss_pred             HHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581         78 WSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus        78 ~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      ||+|++++++++|..|+........... .........+...+..+.+++.+||+.+|++||++.++++
T Consensus       185 ~slG~il~el~tg~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~  252 (277)
T cd06642         185 WSLGITAIELAKGEPPNSDLHPMRVLFL-IPKNSPPTLEGQYSKPFKEFVEACLNKDPRFRPTAKELLK  252 (277)
T ss_pred             HHHHHHHHHHHhCCCCCcccchhhHHhh-hhcCCCCCCCcccCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence            9999999999999999876554433322 2222233344567888999999999999999999999986

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=99.92  E-value=6.3e-25  Score=154.20  Aligned_cols=136  Identities=22%  Similarity=0.224  Sum_probs=104.8

Q ss_pred             hhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc-------------------------------------
Q psy12581          6 IVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ-------------------------------------   48 (153)
Q Consensus         6 ~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~-------------------------------------   48 (153)
                      ..++.|||.++|.|+||++.||+++.++.+|+.  |||++...                                     
T Consensus       111 ~~aL~~LH~~givHrDlKp~Nili~~~~~~kL~--DFGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  188 (381)
T cd05626         111 TLAIESVHKMGFIHRDIKPDNILIDLDGHIKLT--DFGLCTGFRWTHNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDR  188 (381)
T ss_pred             HHHHHHHHhCCeeecCCcHHHEEECCCCCEEEe--eCcCCcccccccccccccccccccccccCcccccccccccccccc
Confidence            457899999999999999999999999988888  99985210                                     


Q ss_pred             -----------------CCcccCCcccCccccccCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhcc
Q psy12581         49 -----------------RGRCYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGL  111 (153)
Q Consensus        49 -----------------~~~~~~~~~~~pe~~~~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~  111 (153)
                                       ....||+.|+|||.+.+.   .++.++|+||+|+++|++++|..||...........+.....
T Consensus       189 ~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~---~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~i~~~~~  265 (381)
T cd05626         189 LKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRK---GYTQLCDWWSVGVILFEMLVGQPPFLAPTPTETQLKVINWEN  265 (381)
T ss_pred             cchhhccccccccccccccccCCccccCHHHHcCC---CCCCccceeehhhHHHHHHhCCCCCcCCCHHHHHHHHHcccc
Confidence                             123688999999998764   345789999999999999999999988765555444443222


Q ss_pred             ccCC--CCCCCHHHHHHHHHHh--cCCCCCCCCHHHHHH
Q psy12581        112 RITI--PPGISSHLSKLIRICM--NEDPGKRPTFDMVLP  146 (153)
Q Consensus       112 ~~~~--~~~~~~~~~~l~~~cl--~~~p~~Rps~~~~l~  146 (153)
                      ....  ....++++.+++.+|+  ..++..|+++.++++
T Consensus       266 ~~~~~~~~~~s~~~~dli~~ll~~~~~~~~R~~~~~~l~  304 (381)
T cd05626         266 TLHIPPQVKLSPEAVDLITKLCCSAEERLGRNGADDIKA  304 (381)
T ss_pred             ccCCCCCCCCCHHHHHHHHHHccCcccccCCCCHHHHhc
Confidence            2222  3357899999999854  455556999999975

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=99.91  E-value=1.6e-24  Score=146.61  Aligned_cols=140  Identities=24%  Similarity=0.348  Sum_probs=106.9

Q ss_pred             hhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc-------CCcccCCcccCccccccCC--CCCCcchhh
Q psy12581          6 IVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ-------RGRCYYPAWMSPEALQKKP--GDRNLEACD   76 (153)
Q Consensus         6 ~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~-------~~~~~~~~~~~pe~~~~~~--~~~~~~~~d   76 (153)
                      .-+..|||++++.|+|+.+.||+++.++.+++.  |||.+...       ....+++.|++||.+....  ...++.++|
T Consensus       134 ~~~l~~lH~~~i~H~dlkp~nili~~~~~~kl~--dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~D  211 (286)
T cd06638         134 LMGLQHLHVNKTIHRDVKGNNILLTTEGGVKLV--DFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCD  211 (286)
T ss_pred             HHHHHHHHhCCccccCCCHHhEEECCCCCEEEc--cCCceeecccCCCccccccCCCcccChhhhchhhhccccccchhh
Confidence            346789999999999999999999999988888  99987432       1235778999999875321  123567899


Q ss_pred             HHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhc-cccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHH
Q psy12581         77 MWSFAVLLWELATREVPFADLTPMEVGMKVALEG-LRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPI  147 (153)
Q Consensus        77 v~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~  147 (153)
                      +||+|++++++++|+.||................ .....+...+..+.+++.+||+.+|++|||+.++++.
T Consensus       212 v~slGvi~~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~  283 (286)
T cd06638         212 VWSLGITAIELGDGDPPLADLHPMRALFKIPRNPPPTLHQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQH  283 (286)
T ss_pred             hhhHHHHHHHHhcCCCCCCCCchhHHHhhccccCCCcccCCCCcCHHHHHHHHHHccCCcccCCCHHHHhhc
Confidence            9999999999999999997765444332221111 1122344467889999999999999999999999875

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>KOG1187|consensus

Probab=99.91  E-value=4.5e-25  Score=153.00  Aligned_cols=147  Identities=20%  Similarity=0.222  Sum_probs=108.9

Q ss_pred             CccchhhHHhhhhcCC---CCCCCeeeeeeeeccccchhhcccccccccccCC-----c---ccCCcccCccccccCCCC
Q psy12581          1 MKKKKIVYSFYLNSKK---SKTSNAFLFCCQIDEDLTARINMADAQFSFQQRG-----R---CYYPAWMSPEALQKKPGD   69 (153)
Q Consensus         1 ~~~~~~~~~~~lh~~~---i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~~-----~---~~~~~~~~pe~~~~~~~~   69 (153)
                      |+++.+-++.|||+..   |+|+||+++||++|+++.+||+  |||++.....     .   .||..|++||+...   +
T Consensus       179 Ia~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKls--DFGLa~~~~~~~~~~~~~~~gt~gY~~PEy~~~---g  253 (361)
T KOG1187|consen  179 IALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLS--DFGLAKLGPEGDTSVSTTVMGTFGYLAPEYAST---G  253 (361)
T ss_pred             HHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEcc--CccCcccCCccccceeeecCCCCccCChhhhcc---C
Confidence            5678889999999844   8999999999999999999999  9999844322     1   78999999999875   3


Q ss_pred             CCcchhhHHHHHHHHHHHHhCCCCCCCCC--chh-hhH---HHHhhc-----cccCCC-CCC-----CHHHHHHHHHHhc
Q psy12581         70 RNLEACDMWSFAVLLWELATREVPFADLT--PME-VGM---KVALEG-----LRITIP-PGI-----SSHLSKLIRICMN  132 (153)
Q Consensus        70 ~~~~~~dv~s~g~~~~~~~~g~~p~~~~~--~~~-~~~---~~~~~~-----~~~~~~-~~~-----~~~~~~l~~~cl~  132 (153)
                      ..+.++||||||+++.|+++|+.+.....  ... ...   ..+..+     .-+... ...     -..+..+..+|++
T Consensus       254 ~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~~~~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~  333 (361)
T KOG1187|consen  254 KLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLLEEGKLREIVDPRLKEGEYPDEKEVKKLAELALRCLR  333 (361)
T ss_pred             CcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHHHHCcchhheeCCCccCCCCChHHHHHHHHHHHHHHcC
Confidence            56789999999999999999998776432  111 111   111111     111111 111     2346678889999


Q ss_pred             CCCCCCCCHHHHHHHHhhhh
Q psy12581        133 EDPGKRPTFDMVLPILDKMK  152 (153)
Q Consensus       133 ~~p~~Rps~~~~l~~L~~~~  152 (153)
                      .+|..||++.++++.|..+.
T Consensus       334 ~~~~~RP~m~~Vv~~L~~~~  353 (361)
T KOG1187|consen  334 PDPKERPTMSQVVKELEGIL  353 (361)
T ss_pred             cCCCcCcCHHHHHHHHHhhc
Confidence            99999999999999997653

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=99.91  E-value=1.2e-24  Score=145.85  Aligned_cols=136  Identities=22%  Similarity=0.296  Sum_probs=107.5

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc----------CCcccCCcccCccccccCCCCCCcch
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ----------RGRCYYPAWMSPEALQKKPGDRNLEA   74 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~----------~~~~~~~~~~~pe~~~~~~~~~~~~~   74 (153)
                      ..-++.|||++++.|+||.+.||+++.++.+++.  |||.+...          ....++..|++||.+.+.   ..+.+
T Consensus       115 l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l~--Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~  189 (265)
T cd06652         115 ILEGVSYLHSNMIVHRDIKGANILRDSVGNVKLG--DFGASKRLQTICLSGTGMKSVTGTPYWMSPEVISGE---GYGRK  189 (265)
T ss_pred             HHHHHHHHHhCCEecCCCCHHHEEecCCCCEEEC--cCccccccccccccccccccCCCCccccChhhhcCC---CCCcc
Confidence            3456799999999999999999999999988888  99987432          123467789999998753   34578


Q ss_pred             hhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581         75 CDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus        75 ~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      +|+||+|+++|++++|+.||..................+..|...+..+.+++++|+. +|++||+++++++
T Consensus       190 ~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~  260 (265)
T cd06652         190 ADIWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQPTNPVLPPHVSDHCRDFLKRIFV-EAKLRPSADELLR  260 (265)
T ss_pred             hhHHHHHHHHHHHhhCCCCCCccchHHHHHHHhcCCCCCCCchhhCHHHHHHHHHHhc-ChhhCCCHHHHhc
Confidence            9999999999999999999977654444443333333444566677889999999995 8999999999875

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.91  E-value=3e-24  Score=144.70  Aligned_cols=141  Identities=26%  Similarity=0.385  Sum_probs=104.2

Q ss_pred             chhhHHhhhhcCCCCCCCeeeeeeeeccccch-----hhccccccccccc---CCcccCCcccCccccccCCCCCCcchh
Q psy12581          4 KKIVYSFYLNSKKSKTSNAFLFCCQIDEDLTA-----RINMADAQFSFQQ---RGRCYYPAWMSPEALQKKPGDRNLEAC   75 (153)
Q Consensus         4 ~~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~-----kl~~~d~g~~~~~---~~~~~~~~~~~pe~~~~~~~~~~~~~~   75 (153)
                      ..+-++.|||++++.|+||.+.||+++..+..     .+.+.|||.+...   ....++..|++||.+.+.  ..++.++
T Consensus       125 qi~~~l~~lH~~~iiH~dlkp~Nill~~~~~~~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~aPe~~~~~--~~~~~~~  202 (274)
T cd05076         125 QLASALSYLEDKNLVHGNVCAKNILLARLGLAEGTSPFIKLSDPGVSFTALSREERVERIPWIAPECVPGG--NSLSTAA  202 (274)
T ss_pred             HHHHHHHHHHcCCccCCCCCcccEEEeccCcccCccceeeecCCccccccccccccccCCcccCchhhcCC--CCCCcHH
Confidence            34557899999999999999999999865431     2334499986322   234567889999988642  2356889


Q ss_pred             hHHHHHHHHHHHH-hCCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHh
Q psy12581         76 DMWSFAVLLWELA-TREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILD  149 (153)
Q Consensus        76 dv~s~g~~~~~~~-~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~  149 (153)
                      |+||||+++|+++ +|..||.......... ....  ....+...++.+.+++.+||+.+|++|||+.++++.|+
T Consensus       203 Dv~slG~~l~el~~~g~~p~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~il~~L~  274 (274)
T cd05076         203 DKWSFGTTLLEICFDGEVPLKERTPSEKER-FYEK--KHRLPEPSCKELATLISQCLTYEPTQRPSFRTILRDLT  274 (274)
T ss_pred             HHHHHHHHHHHHHhCCCCCccccChHHHHH-HHHh--ccCCCCCCChHHHHHHHHHcccChhhCcCHHHHHHhhC
Confidence            9999999999984 6899987765443322 2222  22334445678999999999999999999999998874

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=99.91  E-value=2.5e-24  Score=143.99  Aligned_cols=140  Identities=24%  Similarity=0.335  Sum_probs=107.3

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccccC-----------CcccCCcccCccccccCCCCCCcc
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQR-----------GRCYYPAWMSPEALQKKPGDRNLE   73 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~-----------~~~~~~~~~~pe~~~~~~~~~~~~   73 (153)
                      .+-++.|||++++.|+||.+.||+++.++.+++.  |||.+....           ...++..|++||.+........+.
T Consensus       108 i~~~l~~lh~~~i~H~dl~~~nil~~~~~~~kl~--d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~  185 (264)
T cd06626         108 LLEGLAYLHSHGIVHRDIKPANIFLDHNGVIKLG--DFGCAVKLKNNTTTMGEEVQSLAGTPAYMAPEVITGGKGKGHGR  185 (264)
T ss_pred             HHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEc--ccccccccCCCCCcccccccCCcCCcCccChhhccCCCCCCCCc
Confidence            4456789999999999999999999999988888  999874321           234677899999987643223567


Q ss_pred             hhhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCCCC--CCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581         74 ACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPG--ISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus        74 ~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      ++|+|++|++++++++|..||.+................+..|..  .+..+.+++.+||+.+|++||++++++.
T Consensus       186 ~~Dv~s~G~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~  260 (264)
T cd06626         186 AADIWSLGCVVLEMATGKRPWSELDNEFQIMFHVGAGHKPPIPDSLQLSPEGKDFLDRCLESDPKKRPTASELLQ  260 (264)
T ss_pred             ccchHHHHHHHHHHHhCCCCccCCcchHHHHHHHhcCCCCCCCcccccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence            899999999999999999999765433322222222333344444  3889999999999999999999999864

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>KOG0614|consensus

Probab=99.91  E-value=5.7e-25  Score=153.37  Aligned_cols=128  Identities=23%  Similarity=0.329  Sum_probs=113.7

Q ss_pred             HHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc------CCcccCCcccCccccccCCCCCCcchhhHHHHH
Q psy12581          8 YSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ------RGRCYYPAWMSPEALQKKPGDRNLEACDMWSFA   81 (153)
Q Consensus         8 ~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~------~~~~~~~~~~~pe~~~~~~~~~~~~~~dv~s~g   81 (153)
                      +.+|||+++|+-+|+++.|+++|.+|.+|++  |||++...      -+.||||.|.+||++....+.   .+.|.|++|
T Consensus       532 AfeYLH~k~iIYRDLKPENllLd~~Gy~KLV--DFGFAKki~~g~KTwTFcGTpEYVAPEIILnKGHD---~avDyWaLG  606 (732)
T KOG0614|consen  532 AFEYLHRKGIIYRDLKPENLLLDNRGYLKLV--DFGFAKKIGSGRKTWTFCGTPEYVAPEIILNKGHD---RAVDYWALG  606 (732)
T ss_pred             HHHHHHhcCceeccCChhheeeccCCceEEe--ehhhHHHhccCCceeeecCCcccccchhhhccCcc---hhhHHHHHH
Confidence            6789999999999999999999999999999  99999443      346999999999999875443   789999999


Q ss_pred             HHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCC
Q psy12581         82 VLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPT  140 (153)
Q Consensus        82 ~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps  140 (153)
                      +++||+++|.+||.+.++......++..--....|..++....++++++...+|..|..
T Consensus       607 Ili~ELL~G~pPFs~~dpmktYn~ILkGid~i~~Pr~I~k~a~~Lik~LCr~~P~ERLG  665 (732)
T KOG0614|consen  607 ILIYELLTGSPPFSGVDPMKTYNLILKGIDKIEFPRRITKTATDLIKKLCRDNPTERLG  665 (732)
T ss_pred             HHHHHHHcCCCCCCCCchHHHHHHHHhhhhhhhcccccchhHHHHHHHHHhcCcHhhhc
Confidence            99999999999999999999888777655567788999999999999999999999975

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=99.91  E-value=1.7e-24  Score=147.45  Aligned_cols=137  Identities=19%  Similarity=0.304  Sum_probs=107.2

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc-------CCcccCCcccCccccccCCCCCCcchhhH
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ-------RGRCYYPAWMSPEALQKKPGDRNLEACDM   77 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~-------~~~~~~~~~~~pe~~~~~~~~~~~~~~dv   77 (153)
                      ..-++.|||+.++.|+||.+.||+++.++.+++.  |||++...       ....++..|++||.+.+.   ..+.++|+
T Consensus       126 i~~~L~~LH~~~ivH~dl~p~Nill~~~~~~kL~--dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Dv  200 (297)
T cd06659         126 VLQALCYLHSQGVIHRDIKSDSILLTLDGRVKLS--DFGFCAQISKDVPKRKSLVGTPYWMAPEVISRT---PYGTEVDI  200 (297)
T ss_pred             HHHHHHHHHhCCeecCCCCHHHeEEccCCcEEEe--echhHhhcccccccccceecCccccCHHHHccC---CCCchhhH
Confidence            3446789999999999999999999999988888  99987321       223577899999998754   34578999


Q ss_pred             HHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhcc-ccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581         78 WSFAVLLWELATREVPFADLTPMEVGMKVALEGL-RITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus        78 ~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      ||+|++++++++|+.||...........+..... ....+...+..+.+++.+||+.+|++||+++++++
T Consensus       201 ~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~  270 (297)
T cd06659         201 WSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKLKNAHKISPVLRDFLERMLTREPQERATAQELLD  270 (297)
T ss_pred             HHHHHHHHHHHhCCCCCCCCCHHHHHHHHhccCCCCccccCCCCHHHHHHHHHHhcCCcccCcCHHHHhh
Confidence            9999999999999999976655444333221111 12223456788999999999999999999999986

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=99.91  E-value=1.9e-24  Score=144.56  Aligned_cols=137  Identities=21%  Similarity=0.318  Sum_probs=109.4

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccccCC------cccCCcccCccccccCCCCCCcchhhHH
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQRG------RCYYPAWMSPEALQKKPGDRNLEACDMW   78 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~~------~~~~~~~~~pe~~~~~~~~~~~~~~dv~   78 (153)
                      ..-++.|||++++.|+||.++||+++.++.+++.  |||.+.....      ..++..|++||.+...   .++.++|+|
T Consensus       102 i~~~l~~lH~~~~~h~dl~~~nilv~~~~~~~l~--df~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~---~~~~~~Di~  176 (262)
T cd05572         102 VVLAFEYLHNRGIIYRDLKPENLLLDSNGYVKLV--DFGFAKKLKSGQKTWTFCGTPEYVAPEIILNK---GYDFSVDYW  176 (262)
T ss_pred             HHHHHHHHhhCCcccCCCCHHHEEEcCCCCEEEe--eCCcccccCcccccccccCCcCccChhHhcCC---CCCChhhhh
Confidence            3456789999999999999999999999988888  9998744322      3567889999987653   345789999


Q ss_pred             HHHHHHHHHHhCCCCCCCCC--chhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCC-----HHHHHH
Q psy12581         79 SFAVLLWELATREVPFADLT--PMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPT-----FDMVLP  146 (153)
Q Consensus        79 s~g~~~~~~~~g~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps-----~~~~l~  146 (153)
                      ++|+++|++++|..||....  .......+.........|...+..+.+++.+||+.+|++||+     ++++++
T Consensus       177 slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~  251 (262)
T cd05572         177 SLGILLYELLTGRPPFGEDDEDPMEIYNDILKGNGKLEFPNYIDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKK  251 (262)
T ss_pred             hhHHHHHHHHhCCCCcCCCCCCHHHHHHHHhccCCCCCCCcccCHHHHHHHHHHccCChhhCcCCcccCHHHHhc
Confidence            99999999999999997765  333344444334455566667899999999999999999999     777765

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=99.91  E-value=2.5e-24  Score=145.23  Aligned_cols=136  Identities=26%  Similarity=0.346  Sum_probs=107.2

Q ss_pred             hhHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccccC-------CcccCCcccCccccccCCCCCCcchhhHH
Q psy12581          6 IVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQR-------GRCYYPAWMSPEALQKKPGDRNLEACDMW   78 (153)
Q Consensus         6 ~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~-------~~~~~~~~~~pe~~~~~~~~~~~~~~dv~   78 (153)
                      +-+..|||++++.|+|+.+.||+++.++.+++.  |||.+....       ...++..|++||.+.+.   ..+.++|+|
T Consensus       111 ~~~l~~lh~~~ivH~dl~p~Nil~~~~~~~~l~--dfg~~~~~~~~~~~~~~~~~~~~y~apE~~~~~---~~~~~~Dv~  185 (277)
T cd06640         111 LKGLDYLHSEKKIHRDIKAANVLLSEQGDVKLA--DFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQS---AYDSKADIW  185 (277)
T ss_pred             HHHHHHHHhCCccCcCCChhhEEEcCCCCEEEc--ccccceeccCCccccccccCcccccCHhHhccC---CCccHHHHH
Confidence            446789999999999999999999999988888  999883321       12456789999998753   355889999


Q ss_pred             HHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHH
Q psy12581         79 SFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPI  147 (153)
Q Consensus        79 s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~  147 (153)
                      |+|++++++++|..||........... ......+..+...+..+.+++.+||+.+|++||++++++..
T Consensus       186 slG~il~el~tg~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~  253 (277)
T cd06640         186 SLGITAIELAKGEPPNSDMHPMRVLFL-IPKNNPPTLTGEFSKPFKEFIDACLNKDPSFRPTAKELLKH  253 (277)
T ss_pred             HHHHHHHHHHHCCCCCCCcChHhHhhh-hhcCCCCCCchhhhHHHHHHHHHHcccCcccCcCHHHHHhC
Confidence            999999999999999977654443322 22233344455677889999999999999999999999754

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=99.91  E-value=1.5e-24  Score=146.43  Aligned_cols=141  Identities=25%  Similarity=0.346  Sum_probs=108.8

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc-------CCcccCCcccCccccccCC--CCCCcchh
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ-------RGRCYYPAWMSPEALQKKP--GDRNLEAC   75 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~-------~~~~~~~~~~~pe~~~~~~--~~~~~~~~   75 (153)
                      .+-++.|||++++.|+||.+.||+++.++.+++.  |||.+...       ....+++.|++||.+....  ...++.++
T Consensus       112 l~~~l~~lh~~~i~h~dl~p~nili~~~~~~~l~--d~g~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~s  189 (280)
T cd06611         112 MLEALNFLHSHKVIHRDLKAGNILLTLDGDVKLA--DFGVSAKNKSTLQKRDTFIGTPYWMAPEVVACETFKDNPYDYKA  189 (280)
T ss_pred             HHHHHHHHHHCCcccCCCChhhEEECCCCCEEEc--cCccchhhcccccccceeecchhhcCHHHHhhcccCCCCCCccc
Confidence            3456789999999999999999999999988888  99986332       1235778899999875321  22345789


Q ss_pred             hHHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhc-cccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHH
Q psy12581         76 DMWSFAVLLWELATREVPFADLTPMEVGMKVALEG-LRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPI  147 (153)
Q Consensus        76 dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~  147 (153)
                      |+||+|+++|++++|+.||.+.........+.... .....+..++..+.+++.+||+.+|++||+++++++.
T Consensus       190 Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~  262 (280)
T cd06611         190 DIWSLGITLIELAQMEPPHHELNPMRVLLKILKSEPPTLDQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKH  262 (280)
T ss_pred             cHHHHHHHHHHHHhCCCCcccCCHHHHHHHHhcCCCCCcCCcccCCHHHHHHHHHHhccChhhCcCHHHHhcC
Confidence            99999999999999999998776555443333221 1223355678899999999999999999999998753

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>KOG0584|consensus

Probab=99.91  E-value=9.4e-25  Score=154.73  Aligned_cols=132  Identities=17%  Similarity=0.250  Sum_probs=109.6

Q ss_pred             HHhhhhcCC--CCCCCeeeeeeeeccc-cchhhccccccccccc-----CCcccCCcccCccccccCCCCCCcchhhHHH
Q psy12581          8 YSFYLNSKK--SKTSNAFLFCCQIDED-LTARINMADAQFSFQQ-----RGRCYYPAWMSPEALQKKPGDRNLEACDMWS   79 (153)
Q Consensus         8 ~~~~lh~~~--i~~~ni~~~~~~~~~~-~~~kl~~~d~g~~~~~-----~~~~~~~~~~~pe~~~~~~~~~~~~~~dv~s   79 (153)
                      .+.|||+++  |+|++++.+||||+.+ |.+||.  |+|+|...     ....|||.|||||+..-    .++...||||
T Consensus       155 GL~yLHs~~PPIIHRDLKCDNIFinG~~G~VKIG--DLGLAtl~r~s~aksvIGTPEFMAPEmYEE----~YnE~VDVYa  228 (632)
T KOG0584|consen  155 GLVYLHSQDPPIIHRDLKCDNIFVNGNLGEVKIG--DLGLATLLRKSHAKSVIGTPEFMAPEMYEE----NYNELVDVYA  228 (632)
T ss_pred             HhhhhhcCCCCccccccccceEEEcCCcCceeec--chhHHHHhhccccceeccCccccChHHHhh----hcchhhhhhh
Confidence            468999887  8999999999999754 778887  99999332     33489999999999873    5668899999


Q ss_pred             HHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCC-CCCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581         80 FAVLLWELATREVPFADLTPMEVGMKVALEGLRITI-PPGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus        80 ~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      ||++++||+|+.+||.+-....+.++.+..+..+.. ..--.+++++|+.+|+.. .+.|+|+.++|+
T Consensus       229 FGMCmLEMvT~eYPYsEC~n~AQIYKKV~SGiKP~sl~kV~dPevr~fIekCl~~-~~~R~sa~eLL~  295 (632)
T KOG0584|consen  229 FGMCMLEMVTSEYPYSECTNPAQIYKKVTSGIKPAALSKVKDPEVREFIEKCLAT-KSERLSAKELLK  295 (632)
T ss_pred             hhHHHHHHHhccCChhhhCCHHHHHHHHHcCCCHHHhhccCCHHHHHHHHHHhcC-chhccCHHHHhh
Confidence            999999999999999998777777777777766542 233468999999999999 889999999985

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=99.91  E-value=1.5e-24  Score=147.45  Aligned_cols=136  Identities=19%  Similarity=0.323  Sum_probs=105.9

Q ss_pred             hhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc-------CCcccCCcccCccccccCCCCCCcchhhHH
Q psy12581          6 IVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ-------RGRCYYPAWMSPEALQKKPGDRNLEACDMW   78 (153)
Q Consensus         6 ~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~-------~~~~~~~~~~~pe~~~~~~~~~~~~~~dv~   78 (153)
                      .-+..|||++++.|+||.+.||+++.++.+++.  |||++...       ....++..|++||.+.+.   ..+.++|+|
T Consensus       128 ~~~l~~LH~~~ivH~dlkp~Nill~~~~~~kL~--dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Dv~  202 (292)
T cd06658         128 LRALSYLHNQGVIHRDIKSDSILLTSDGRIKLS--DFGFCAQVSKEVPKRKSLVGTPYWMAPEVISRL---PYGTEVDIW  202 (292)
T ss_pred             HHHHHHHHHCCEeecCCCHHHEEEcCCCCEEEc--cCcchhhcccccccCceeecCccccCHHHHccC---CCCchhhHH
Confidence            346789999999999999999999999988888  99987322       123567889999998653   345789999


Q ss_pred             HHHHHHHHHHhCCCCCCCCCchhhhHHHHhhcccc--CCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHH
Q psy12581         79 SFAVLLWELATREVPFADLTPMEVGMKVALEGLRI--TIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPI  147 (153)
Q Consensus        79 s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~  147 (153)
                      |+|++++++++|..||...........+. .....  ......+..+.+++.+||..+|++|||++++++.
T Consensus       203 slGvil~el~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~  272 (292)
T cd06658         203 SLGIMVIEMIDGEPPYFNEPPLQAMRRIR-DNLPPRVKDSHKVSSVLRGFLDLMLVREPSQRATAQELLQH  272 (292)
T ss_pred             HHHHHHHHHHhCCCCCCCCCHHHHHHHHH-hcCCCccccccccCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence            99999999999999998765544333222 22111  1223467889999999999999999999999853

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=99.91  E-value=1.6e-24  Score=144.47  Aligned_cols=136  Identities=17%  Similarity=0.245  Sum_probs=110.5

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccccCC-------cccCCcccCccccccCCCCCCcchhhH
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQRG-------RCYYPAWMSPEALQKKPGDRNLEACDM   77 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~~-------~~~~~~~~~pe~~~~~~~~~~~~~~dv   77 (153)
                      .+-+..|||++++.|+|+.+.||+++.++.+++.  |||.+.....       ..+++.|++||...+.   ..+.++|+
T Consensus       110 l~~~l~~lh~~~i~h~~l~~~nil~~~~~~~~l~--d~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~---~~~~~~Dv  184 (256)
T cd08218         110 ICLALKHVHDRKILHRDIKSQNIFLTKDGTIKLG--DFGIARVLNSTVELARTCIGTPYYLSPEICENR---PYNNKSDI  184 (256)
T ss_pred             HHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEEe--eccceeecCcchhhhhhccCCccccCHHHhCCC---CCCCccch
Confidence            4556789999999999999999999999988888  9998743321       2467789999998754   34578999


Q ss_pred             HHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581         78 WSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus        78 ~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      ||+|++++++++|..||...........+. .+..++.+...+..+.+++.+||+.+|++||++.++++
T Consensus       185 ~slG~i~~~l~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~  252 (256)
T cd08218         185 WALGCVLYEMCTLKHAFEAGNMKNLVLKII-RGSYPPVSSHYSYDLRNLVSQLFKRNPRDRPSVNSILE  252 (256)
T ss_pred             hHHHHHHHHHHcCCCCccCCCHHHHHHHHh-cCCCCCCcccCCHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence            999999999999999997766555544443 33344556778899999999999999999999999986

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=99.91  E-value=1e-24  Score=147.72  Aligned_cols=137  Identities=18%  Similarity=0.214  Sum_probs=106.4

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccccC------CcccCCcccCccccccCCCCCCcchhhHH
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQR------GRCYYPAWMSPEALQKKPGDRNLEACDMW   78 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~------~~~~~~~~~~pe~~~~~~~~~~~~~~dv~   78 (153)
                      ..-++.|||++++.|+||.+.||+++.++.+++.  |||++....      ...++..|++||.+.+.   .++.++|+|
T Consensus       111 i~~~l~~lH~~~iiH~dikp~Nil~~~~~~~~l~--Dfg~~~~~~~~~~~~~~~g~~~y~aPE~~~~~---~~~~~~Diw  185 (285)
T cd05630         111 ICCGLEDLHQERIVYRDLKPENILLDDHGHIRIS--DLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNE---RYTFSPDWW  185 (285)
T ss_pred             HHHHHHHHHhCCEEeCCCCHHHEEECCCCCEEEe--eccceeecCCCccccCCCCCccccChHHHcCC---CCCCccccH
Confidence            3456799999999999999999999999988887  999874321      23678899999998764   345789999


Q ss_pred             HHHHHHHHHHhCCCCCCCCCchhhh--HHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCC-----HHHHHH
Q psy12581         79 SFAVLLWELATREVPFADLTPMEVG--MKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPT-----FDMVLP  146 (153)
Q Consensus        79 s~g~~~~~~~~g~~p~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps-----~~~~l~  146 (153)
                      |+|+++|++++|..||.........  ............+...+..+.+++.+||+.||++|||     ++++++
T Consensus       186 slG~~l~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~  260 (285)
T cd05630         186 ALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVQEEYSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKE  260 (285)
T ss_pred             HHHHHHHHHHhCCCCCCCCCccchHHHHHhhhhhhhhhcCccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHc
Confidence            9999999999999999764432111  1111122233345668889999999999999999999     788875

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=99.91  E-value=1.6e-24  Score=146.76  Aligned_cols=137  Identities=18%  Similarity=0.216  Sum_probs=106.5

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc------CCcccCCcccCccccccCCCCCCcchhhHH
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ------RGRCYYPAWMSPEALQKKPGDRNLEACDMW   78 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~------~~~~~~~~~~~pe~~~~~~~~~~~~~~dv~   78 (153)
                      ..-++.|||++++.|+||.+.||+++.++.+++.  |||++...      ....++..|++||.+.+.   .++.++|+|
T Consensus       111 l~~~l~~lH~~~iiH~dikp~Nili~~~~~~kl~--Dfg~~~~~~~~~~~~~~~g~~~~~aPE~~~~~---~~~~~~Di~  185 (285)
T cd05632         111 ILCGLEDLHRENTVYRDLKPENILLDDYGHIRIS--DLGLAVKIPEGESIRGRVGTVGYMAPEVLNNQ---RYTLSPDYW  185 (285)
T ss_pred             HHHHHHHHHhCCeeecCCCHHHEEECCCCCEEEe--cCCcceecCCCCcccCCCCCcCccChHHhcCC---CCCcccchH
Confidence            4456799999999999999999999999888888  99987432      224678899999998754   345789999


Q ss_pred             HHHHHHHHHHhCCCCCCCCCchhhhHHHHh--hccccCCCCCCCHHHHHHHHHHhcCCCCCCCC-----HHHHHH
Q psy12581         79 SFAVLLWELATREVPFADLTPMEVGMKVAL--EGLRITIPPGISSHLSKLIRICMNEDPGKRPT-----FDMVLP  146 (153)
Q Consensus        79 s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps-----~~~~l~  146 (153)
                      |+|++++++++|..||.+.........+..  .......+...+..+.+++.+||+.+|++||+     +.++++
T Consensus       186 slG~~l~~l~~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~  260 (285)
T cd05632         186 GLGCLIYEMIEGQSPFRGRKEKVKREEVDRRVLETEEVYSAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKR  260 (285)
T ss_pred             HHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhhccccccCccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHc
Confidence            999999999999999987654332222211  11123345567889999999999999999999     666664

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.91  E-value=5.4e-25  Score=154.37  Aligned_cols=137  Identities=16%  Similarity=0.156  Sum_probs=106.2

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc------------------------------------
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ------------------------------------   48 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~------------------------------------   48 (153)
                      ...+++|||++++.|+||++.||+++.++.+++.  |||++...                                    
T Consensus       110 l~~aL~~LH~~givHrDlkp~NIll~~~~~~kl~--DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (377)
T cd05629         110 CVLAIEAVHKLGFIHRDIKPDNILIDRGGHIKLS--DFGLSTGFHKQHDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLT  187 (377)
T ss_pred             HHHHHHHHHhCCeeccCCCHHHEEECCCCCEEEe--eccccccccccccccccccccccccccccccccccccccccccc
Confidence            3457899999999999999999999999998888  99987310                                    


Q ss_pred             ------------------CCcccCCcccCccccccCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhc
Q psy12581         49 ------------------RGRCYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEG  110 (153)
Q Consensus        49 ------------------~~~~~~~~~~~pe~~~~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~  110 (153)
                                        ....||+.|++||.+.+.   .++.++|+||+|+++|++++|..||.+.........+....
T Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~  264 (377)
T cd05629         188 MSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQ---GYGQECDWWSLGAIMFECLIGWPPFCSENSHETYRKIINWR  264 (377)
T ss_pred             ccchhhhhhhhhcccccccccCCCccccCHHHHccC---CCCCceeeEecchhhhhhhcCCCCCCCCCHHHHHHHHHccC
Confidence                              013588999999998764   34578999999999999999999998776655554444322


Q ss_pred             cccCCCC--CCCHHHHHHHHHHhcCCCCCC---CCHHHHHHH
Q psy12581        111 LRITIPP--GISSHLSKLIRICMNEDPGKR---PTFDMVLPI  147 (153)
Q Consensus       111 ~~~~~~~--~~~~~~~~l~~~cl~~~p~~R---ps~~~~l~~  147 (153)
                      .....|.  ..+..+.+++.+|+. +|.+|   +++.++++.
T Consensus       265 ~~~~~p~~~~~s~~~~dli~~lL~-~~~~r~~r~~~~~~l~h  305 (377)
T cd05629         265 ETLYFPDDIHLSVEAEDLIRRLIT-NAENRLGRGGAHEIKSH  305 (377)
T ss_pred             CccCCCCCCCCCHHHHHHHHHHhc-CHhhcCCCCCHHHHhcC
Confidence            2333333  478899999999998 66665   588888753

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>KOG0659|consensus

Probab=99.91  E-value=2.5e-24  Score=139.27  Aligned_cols=135  Identities=20%  Similarity=0.107  Sum_probs=108.4

Q ss_pred             HHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc-------CCcccCCcccCccccccCCCCCCcchhhHHHH
Q psy12581          8 YSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ-------RGRCYYPAWMSPEALQKKPGDRNLEACDMWSF   80 (153)
Q Consensus         8 ~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~-------~~~~~~~~~~~pe~~~~~~~~~~~~~~dv~s~   80 (153)
                      ..+|||.+.|.|+|+++.|++|+.+|.+|+.  |||++..-       +...-|.+|.|||.+.+.+  .++...|+||.
T Consensus       113 Gl~y~H~~~IlHRDlKPnNLLis~~g~lKiA--DFGLAr~f~~p~~~~~~~V~TRWYRAPELLfGsr--~Yg~~VDmWav  188 (318)
T KOG0659|consen  113 GLAYCHSKWILHRDLKPNNLLISSDGQLKIA--DFGLARFFGSPNRIQTHQVVTRWYRAPELLFGSR--QYGTGVDMWAV  188 (318)
T ss_pred             HHHHHHhhhhhcccCCccceEEcCCCcEEee--cccchhccCCCCcccccceeeeeccChHHhccch--hcCCcchhhhH
Confidence            4689999999999999999999999999999  99998432       2336788999999998753  45578999999


Q ss_pred             HHHHHHHHhCCCCCCCCCchhhhHHHHhhcccc--------------------C------CCCCCCHHHHHHHHHHhcCC
Q psy12581         81 AVLLWELATREVPFADLTPMEVGMKVALEGLRI--------------------T------IPPGISSHLSKLIRICMNED  134 (153)
Q Consensus        81 g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~--------------------~------~~~~~~~~~~~l~~~cl~~~  134 (153)
                      ||++.|++.+.+-|.+.++-+++..+...-..+                    +      .-...+....+++.+|+..|
T Consensus       189 GCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~~lpdY~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~yn  268 (318)
T KOG0659|consen  189 GCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMTSLPDYVKIQQFPKPPLNNLFPAASSDALDLLSKMLTYN  268 (318)
T ss_pred             HHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCccccccccHHHHhcCCCCccccccccccHHHHHHHHhhhccC
Confidence            999999999999888888777766554321111                    0      01234567899999999999


Q ss_pred             CCCCCCHHHHHH
Q psy12581        135 PGKRPTFDMVLP  146 (153)
Q Consensus       135 p~~Rps~~~~l~  146 (153)
                      |.+|+++.|+++
T Consensus       269 P~~Rita~qaL~  280 (318)
T KOG0659|consen  269 PKKRITASQALK  280 (318)
T ss_pred             chhcccHHHHhc
Confidence            999999999875

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=99.91  E-value=1.8e-24  Score=147.31  Aligned_cols=136  Identities=20%  Similarity=0.336  Sum_probs=106.3

Q ss_pred             hhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc-------CCcccCCcccCccccccCCCCCCcchhhHH
Q psy12581          6 IVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ-------RGRCYYPAWMSPEALQKKPGDRNLEACDMW   78 (153)
Q Consensus         6 ~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~-------~~~~~~~~~~~pe~~~~~~~~~~~~~~dv~   78 (153)
                      .-++.|||+.++.|+|+.++||+++.++.+++.  |||.+...       ....+++.|++||.+.+.   .++.++|+|
T Consensus       125 ~~~L~~LH~~~i~H~dL~p~Nili~~~~~~~l~--Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~  199 (297)
T cd06656         125 LQALDFLHSNQVIHRDIKSDNILLGMDGSVKLT--DFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRK---AYGPKVDIW  199 (297)
T ss_pred             HHHHHHHHHCCcccCCCCHHHEEECCCCCEEEC--cCccceEccCCccCcCcccCCccccCHHHHcCC---CCCcHHHHH
Confidence            446789999999999999999999999988888  99987432       123567889999998753   345889999


Q ss_pred             HHHHHHHHHHhCCCCCCCCCchhhhHHHHhhc-cccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581         79 SFAVLLWELATREVPFADLTPMEVGMKVALEG-LRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus        79 s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      ++|++++++++|..||.+.............+ .....+...+..+.+++.+||..+|++||+++++++
T Consensus       200 slGvil~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  268 (297)
T cd06656         200 SLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQ  268 (297)
T ss_pred             HHHHHHHHHHhCCCCCCCCCcchheeeeccCCCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            99999999999999997655433322222111 122345567888999999999999999999999986

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=99.91  E-value=3.5e-24  Score=146.36  Aligned_cols=139  Identities=17%  Similarity=0.226  Sum_probs=106.9

Q ss_pred             hhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc----------------------CCcccCCcccCcccc
Q psy12581          6 IVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ----------------------RGRCYYPAWMSPEAL   63 (153)
Q Consensus         6 ~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~----------------------~~~~~~~~~~~pe~~   63 (153)
                      .-++.|||++++.|+||.+.||+++.++.+++.  |||++...                      ....++..|++||.+
T Consensus       111 ~~~l~~lH~~~i~H~dl~p~NIll~~~~~~~l~--dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~  188 (305)
T cd05609         111 VLALEYLHNYGIVHRDLKPDNLLITSMGHIKLT--DFGLSKIGLMSLTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVI  188 (305)
T ss_pred             HHHHHHHHHCCccccCCchHHEEECCCCCEEEe--eCCCccccCcCccccccccccccchhhccccCCccCccccCchhc
Confidence            457799999999999999999999999988888  99976320                      112456789999988


Q ss_pred             ccCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccc-cCCCCCCCHHHHHHHHHHhcCCCCCCCCHH
Q psy12581         64 QKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLR-ITIPPGISSHLSKLIRICMNEDPGKRPTFD  142 (153)
Q Consensus        64 ~~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~  142 (153)
                      .+.   ..+.++|+||+|++++++++|..||.+....+........... +..+...+..+.+++.+||+.+|++||+..
T Consensus       189 ~~~---~~~~~~Di~slG~vl~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~  265 (305)
T cd05609         189 LRQ---GYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEWPEGDEALPADAQDLISRLLRQNPLERLGTG  265 (305)
T ss_pred             cCC---CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcccCCCCccccCCHHHHHHHHHHhccChhhccCcc
Confidence            653   3458899999999999999999999876655544444333222 222235788999999999999999999965


Q ss_pred             HHHHHHh
Q psy12581        143 MVLPILD  149 (153)
Q Consensus       143 ~~l~~L~  149 (153)
                      .+.+.|+
T Consensus       266 ~~~~ll~  272 (305)
T cd05609         266 GAFEVKQ  272 (305)
T ss_pred             CHHHHHh
Confidence            5555554

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=99.91  E-value=3.2e-24  Score=147.18  Aligned_cols=137  Identities=18%  Similarity=0.112  Sum_probs=97.7

Q ss_pred             hhHHhhhhcCCCCCCCeeeeeeee----ccccchhhccccccccccc----------CCcccCCcccCccccccCCCCCC
Q psy12581          6 IVYSFYLNSKKSKTSNAFLFCCQI----DEDLTARINMADAQFSFQQ----------RGRCYYPAWMSPEALQKKPGDRN   71 (153)
Q Consensus         6 ~~~~~~lh~~~i~~~ni~~~~~~~----~~~~~~kl~~~d~g~~~~~----------~~~~~~~~~~~pe~~~~~~~~~~   71 (153)
                      .-++.|||++++.|+||++.||++    +.++.+|+.  |||++...          ....+|+.|+|||.+.+..  .+
T Consensus       118 ~~al~~LH~~~ivHrDlkp~Nil~~~~~~~~~~~kl~--DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~--~~  193 (317)
T cd07868         118 LDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIA--DMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGAR--HY  193 (317)
T ss_pred             HHHHHHHHhCCEEcCCCCHHHEEEecCCCCcCcEEEe--ecCceeccCCCCccccccCCccccccccCCHHHcCCC--Cc
Confidence            457899999999999999999999    455667777  99988432          2246788999999987532  34


Q ss_pred             cchhhHHHHHHHHHHHHhCCCCCCCCCch---------hhhHHHHhh-----------------------ccc---c---
Q psy12581         72 LEACDMWSFAVLLWELATREVPFADLTPM---------EVGMKVALE-----------------------GLR---I---  113 (153)
Q Consensus        72 ~~~~dv~s~g~~~~~~~~g~~p~~~~~~~---------~~~~~~~~~-----------------------~~~---~---  113 (153)
                      +.++|+||+|++++++++|+.||......         .....+...                       ...   .   
T Consensus       194 ~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  273 (317)
T cd07868         194 TKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNC  273 (317)
T ss_pred             CchhhHHHHHHHHHHHHhCCCCccCCcccccccccccHHHHHHHHHhcCCCChHHhHHHhhccchhhhhhhhhccccCcc
Confidence            57899999999999999999999643221         111111000                       000   0   


Q ss_pred             -------CCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581        114 -------TIPPGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus       114 -------~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                             ......+..+.+++.+||+.||++|||++++++
T Consensus       274 ~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~t~~e~l~  313 (317)
T cd07868         274 SLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQ  313 (317)
T ss_pred             cccchHHhcCCCCChHHHHHHHHHhccCcccCCCHHHHhc
Confidence                   000112456889999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=99.91  E-value=4e-24  Score=145.80  Aligned_cols=138  Identities=14%  Similarity=0.107  Sum_probs=104.3

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc-------CCcccCCcccCccccccCCCCCCcchhhH
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ-------RGRCYYPAWMSPEALQKKPGDRNLEACDM   77 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~-------~~~~~~~~~~~pe~~~~~~~~~~~~~~dv   77 (153)
                      ..-++.|||++++.|+||.+.||+++.++.+++.  |||++...       ....+++.|++||.+.+.  ...+.++|+
T Consensus       113 i~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~kl~--dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~--~~~~~~~Dv  188 (301)
T cd07873         113 LLRGLNYCHRRKVLHRDLKPQNLLINERGELKLA--DFGLARAKSIPTKTYSNEVVTLWYRPPDILLGS--TDYSTQIDM  188 (301)
T ss_pred             HHHHHHHHHhCCeeCCCCCHHHEEECCCCcEEEC--cCcchhccCCCCCcccccceeecccCcHHHhCC--CCCccHHHH
Confidence            3456899999999999999999999999988888  99987432       123457889999987653  234578999


Q ss_pred             HHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhc-----------------cccCC-----------CCCCCHHHHHHHHH
Q psy12581         78 WSFAVLLWELATREVPFADLTPMEVGMKVALEG-----------------LRITI-----------PPGISSHLSKLIRI  129 (153)
Q Consensus        78 ~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~-----------------~~~~~-----------~~~~~~~~~~l~~~  129 (153)
                      ||+|++++++++|+.||.+....+....+....                 .....           ....++.+.+++.+
T Consensus       189 ~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  268 (301)
T cd07873         189 WGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKSYNYPKYRADCLHNHAPRLDSDGAELLSK  268 (301)
T ss_pred             HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchhhhccccccccccCccccccHHhhcCCCCHHHHHHHHH
Confidence            999999999999999998765443322211100                 00001           12457789999999


Q ss_pred             HhcCCCCCCCCHHHHHH
Q psy12581        130 CMNEDPGKRPTFDMVLP  146 (153)
Q Consensus       130 cl~~~p~~Rps~~~~l~  146 (153)
                      ||+.||.+|||++++++
T Consensus       269 ml~~dp~~R~t~~eil~  285 (301)
T cd07873         269 LLQFEGRKRISAEEAMK  285 (301)
T ss_pred             HhcCCcccCcCHHHHhc
Confidence            99999999999999986

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=99.91  E-value=7e-24  Score=141.29  Aligned_cols=137  Identities=33%  Similarity=0.529  Sum_probs=109.1

Q ss_pred             hhHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccccC--------CcccCCcccCccccccCCCCCCcchhhH
Q psy12581          6 IVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQR--------GRCYYPAWMSPEALQKKPGDRNLEACDM   77 (153)
Q Consensus         6 ~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~--------~~~~~~~~~~pe~~~~~~~~~~~~~~dv   77 (153)
                      .-++.|||++++.|+||.+.||+++.++.+++.  |||.+....        ...++..|++||.+...   ..+.++|+
T Consensus       113 ~~~l~~lh~~~~~h~dl~~~nil~~~~~~~~l~--dfg~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~---~~~~~~Di  187 (258)
T smart00219      113 ARGMEYLESKNFIHRDLAARNCLVGENLVVKIS--DFGLSRDLYDDDYYKKKGGKLPIRWMAPESLKDG---KFTSKSDV  187 (258)
T ss_pred             HHHHHHHhcCCeeecccccceEEEccCCeEEEc--ccCCceecccccccccccCCCcccccChHHhccC---CCCcchhH
Confidence            456789999999999999999999999988888  999884322        12356789999988543   34588999


Q ss_pred             HHHHHHHHHHHh-CCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHH
Q psy12581         78 WSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPIL  148 (153)
Q Consensus        78 ~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L  148 (153)
                      |++|++++++++ |..||............ ........+...+..+.+++.+||..+|++|||+.++++.|
T Consensus       188 ~slG~i~~~l~~~g~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~l  258 (258)
T smart00219      188 WSFGVLLWEIFTLGESPYPGMSNEEVLEYL-KKGYRLPKPENCPPEIYKLMLQCWAEDPEDRPTFSELVEIL  258 (258)
T ss_pred             HHHHHHHHHHHhCCCCCCCCCCHHHHHHHH-hcCCCCCCCCcCCHHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence            999999999998 78888775554444433 33444555666889999999999999999999999998764

Phosphotransferases. Tyrosine-specific kinase subfamily.

>PHA03207 serine/threonine kinase US3; Provisional

Probab=99.91  E-value=1.9e-24  Score=152.34  Aligned_cols=137  Identities=20%  Similarity=0.185  Sum_probs=102.5

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccccC---------CcccCCcccCccccccCCCCCCcchh
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQR---------GRCYYPAWMSPEALQKKPGDRNLEAC   75 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~---------~~~~~~~~~~pe~~~~~~~~~~~~~~   75 (153)
                      ..-++.|||+++|.|+||++.||+++.++.+++.  |||++....         ...|++.|++||.+.+.   .++.++
T Consensus       194 l~~aL~~LH~~givHrDlkp~Nill~~~~~~~l~--DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~  268 (392)
T PHA03207        194 LLEALAYLHGRGIIHRDVKTENIFLDEPENAVLG--DFGAACKLDAHPDTPQCYGWSGTLETNSPELLALD---PYCAKT  268 (392)
T ss_pred             HHHHHHHHHHCCccccCCCHHHEEEcCCCCEEEc--cCccccccCcccccccccccccccCccCHhHhcCC---CCCchh
Confidence            3457899999999999999999999999988888  999874321         23588999999998764   345789


Q ss_pred             hHHHHHHHHHHHHhCCCCCCCCCchh---hhHHHHh-------------------------hccccC--CC-----CCCC
Q psy12581         76 DMWSFAVLLWELATREVPFADLTPME---VGMKVAL-------------------------EGLRIT--IP-----PGIS  120 (153)
Q Consensus        76 dv~s~g~~~~~~~~g~~p~~~~~~~~---~~~~~~~-------------------------~~~~~~--~~-----~~~~  120 (153)
                      |+||+|+++|++++|..||.+.....   ....+..                         ...+.+  .+     ...+
T Consensus       269 DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  348 (392)
T PHA03207        269 DIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNGSTNLCKHFKQYAIVLRPPYTIPPVIRKYGMH  348 (392)
T ss_pred             hHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCccchhHHHHHHhhcccccCCccccchhhccCcc
Confidence            99999999999999999986643221   1111110                         000000  01     1245


Q ss_pred             HHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581        121 SHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus       121 ~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      ..+.+++.+||..+|++|||+.+++.
T Consensus       349 ~~~~~li~~ml~~dp~~Rpsa~e~l~  374 (392)
T PHA03207        349 MDVEYLIAKMLTFDQEFRPSAQDILS  374 (392)
T ss_pred             hhHHHHHHHHhccChhhCCCHHHHhh
Confidence            67889999999999999999999875

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=99.91  E-value=3.1e-24  Score=145.07  Aligned_cols=138  Identities=14%  Similarity=0.076  Sum_probs=100.9

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccccC-------CcccCCcccCccccccCCCCCCcchhhH
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQR-------GRCYYPAWMSPEALQKKPGDRNLEACDM   77 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~-------~~~~~~~~~~pe~~~~~~~~~~~~~~dv   77 (153)
                      ..-++.|||++++.|+||.+.||+++.++.+++.  |||.+....       ...++..|++||.+.+..  .++.++|+
T Consensus       108 i~~al~~LH~~~i~H~dl~~~nil~~~~~~~~l~--dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~--~~~~~~Di  183 (284)
T cd07839         108 LLKGLAFCHSHNVLHRDLKPQNLLINKNGELKLA--DFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAK--LYSTSIDM  183 (284)
T ss_pred             HHHHHHHHHHCCEecCCCCHHHEEEcCCCcEEEC--ccchhhccCCCCCCcCCCccccCCcChHHHhCCc--ccCcHHHH
Confidence            3456899999999999999999999999988888  999874322       234577899999886532  34578999


Q ss_pred             HHHHHHHHHHHhCCCCCCC-CCchhhhHHHHhh------------------cccc---------CCCCCCCHHHHHHHHH
Q psy12581         78 WSFAVLLWELATREVPFAD-LTPMEVGMKVALE------------------GLRI---------TIPPGISSHLSKLIRI  129 (153)
Q Consensus        78 ~s~g~~~~~~~~g~~p~~~-~~~~~~~~~~~~~------------------~~~~---------~~~~~~~~~~~~l~~~  129 (153)
                      ||+|++++++++|..|+.. .........+...                  ....         +.....+..+.+++.+
T Consensus       184 wslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  263 (284)
T cd07839         184 WSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLPDYKPYPMYPATTSLVNVVPKLNSTGRDLLQN  263 (284)
T ss_pred             HHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhcccccccCCCCCcchhhhhcccCCHHHHHHHHH
Confidence            9999999999998887543 2222221111100                  0000         0112357789999999


Q ss_pred             HhcCCCCCCCCHHHHHH
Q psy12581        130 CMNEDPGKRPTFDMVLP  146 (153)
Q Consensus       130 cl~~~p~~Rps~~~~l~  146 (153)
                      ||+.||++|||++++++
T Consensus       264 ~l~~~P~~R~t~~~il~  280 (284)
T cd07839         264 LLVCNPVQRISAEEALQ  280 (284)
T ss_pred             HhcCChhhcCCHHHHhc
Confidence            99999999999999875

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=99.91  E-value=3.8e-24  Score=142.62  Aligned_cols=138  Identities=22%  Similarity=0.336  Sum_probs=109.6

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc------CCcccCCcccCccccccCCCCCCcchhhHH
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ------RGRCYYPAWMSPEALQKKPGDRNLEACDMW   78 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~------~~~~~~~~~~~pe~~~~~~~~~~~~~~dv~   78 (153)
                      .+-++.|||+.++.|+||.++||+++.++.+|+.  |||.+...      ....++..|++||.+....  ..+.++|+|
T Consensus       111 i~~~l~~lH~~~i~H~dl~~~ni~~~~~~~~kl~--d~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~--~~~~~~D~~  186 (258)
T cd06632         111 ILLGLEYLHDRNTVHRDIKGANILVDTNGVVKLA--DFGMAKQVVEFSFAKSFKGSPYWMAPEVIAQQG--GYGLAADIW  186 (258)
T ss_pred             HHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEc--cCccceeccccccccccCCCcceeCHHHhcCCC--CCCchhhhH
Confidence            4557789999999999999999999999988888  99987432      2345778899999876532  255789999


Q ss_pred             HHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581         79 SFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus        79 s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      ++|++++++++|..||.....................+...+..+.+++.+||+.+|++||++++++.
T Consensus       187 slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~  254 (258)
T cd06632         187 SLGCTVLEMATGKPPWSQLEGVAAVFKIGRSKELPPIPDHLSDEAKDFILKCLQRDPSLRPTAAELLE  254 (258)
T ss_pred             HHHHHHHHHHhCCCCcccCcHHHHHHHHHhcccCCCcCCCcCHHHHHHHHHHhhcCcccCcCHHHHhc
Confidence            99999999999999997766444433333223344456678899999999999999999999999875

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=99.91  E-value=3.1e-24  Score=145.37  Aligned_cols=136  Identities=18%  Similarity=0.298  Sum_probs=105.8

Q ss_pred             hhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc-------CCcccCCcccCccccccCCCCCCcchhhHH
Q psy12581          6 IVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ-------RGRCYYPAWMSPEALQKKPGDRNLEACDMW   78 (153)
Q Consensus         6 ~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~-------~~~~~~~~~~~pe~~~~~~~~~~~~~~dv~   78 (153)
                      .-++.|||++++.|++|.+.||+++.++.+++.  |||.+...       ....++..|++||.+.+.   .++.++|+|
T Consensus       125 ~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~--d~g~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Dv~  199 (285)
T cd06648         125 LKALSFLHAQGVIHRDIKSDSILLTSDGRVKLS--DFGFCAQVSKEVPRRKSLVGTPYWMAPEVISRL---PYGTEVDIW  199 (285)
T ss_pred             HHHHHHHHhCCeecCCCChhhEEEcCCCcEEEc--ccccchhhccCCcccccccCCccccCHHHhcCC---CCCCcccHH
Confidence            456789999999999999999999999988888  99976322       123577889999998754   345789999


Q ss_pred             HHHHHHHHHHhCCCCCCCCCchhhhHHHHhhcc-ccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581         79 SFAVLLWELATREVPFADLTPMEVGMKVALEGL-RITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus        79 s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      |+|++++++++|..||................. ....+...+..+.+++.+||..+|++||+++++++
T Consensus       200 slGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~  268 (285)
T cd06648         200 SLGIMVIEMVDGEPPYFNEPPLQAMKRIRDNLPPKLKNLHKVSPRLRSFLDRMLVRDPAQRATAAELLN  268 (285)
T ss_pred             HHHHHHHHHHhCCCCCcCCCHHHHHHHHHhcCCCCCcccccCCHHHHHHHHHHcccChhhCcCHHHHcc
Confidence            999999999999999977655444333322211 11223346789999999999999999999999875

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=99.91  E-value=5.5e-24  Score=142.21  Aligned_cols=136  Identities=24%  Similarity=0.345  Sum_probs=109.5

Q ss_pred             hhhHHhhhh-----cCCCCCCCeeeeeeeeccccchhhccccccccccc-------CCcccCCcccCccccccCCCCCCc
Q psy12581          5 KIVYSFYLN-----SKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ-------RGRCYYPAWMSPEALQKKPGDRNL   72 (153)
Q Consensus         5 ~~~~~~~lh-----~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~-------~~~~~~~~~~~pe~~~~~~~~~~~   72 (153)
                      ..-++.|||     ..++.|+||.+.||+++.++.+++.  |||.+...       ....++..|++||.+...   ..+
T Consensus       114 i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~--d~g~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~---~~~  188 (265)
T cd08217         114 LLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLG--DFGLAKILGHDSSFAKTYVGTPYYMSPEQLNHM---SYD  188 (265)
T ss_pred             HHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEe--cccccccccCCcccccccccCCCccChhhhcCC---CCC
Confidence            344678999     8889999999999999999988888  99987432       223578889999998754   345


Q ss_pred             chhhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581         73 EACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus        73 ~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      .++|+|++|++++++++|..||......... .....+.....+...+..+.+++.+||+.+|++||++.++++
T Consensus       189 ~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~  261 (265)
T cd08217         189 EKSDIWSLGCLIYELCALSPPFTARNQLQLA-SKIKEGKFRRIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQ  261 (265)
T ss_pred             chhHHHHHHHHHHHHHHCCCcccCcCHHHHH-HHHhcCCCCCCccccCHHHHHHHHHHccCCcccCCCHHHHhh
Confidence            7899999999999999999999876643333 333344444566778899999999999999999999999986

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=99.91  E-value=5.7e-24  Score=141.81  Aligned_cols=136  Identities=23%  Similarity=0.276  Sum_probs=109.2

Q ss_pred             hhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc-------CCcccCCcccCccccccCCCCCCcchhhHH
Q psy12581          6 IVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ-------RGRCYYPAWMSPEALQKKPGDRNLEACDMW   78 (153)
Q Consensus         6 ~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~-------~~~~~~~~~~~pe~~~~~~~~~~~~~~dv~   78 (153)
                      .-+..|||+.++.|+|+.+.||+++.++.+|+.  |||.+...       ....+++.|++||.+.+.   ..+.++|+|
T Consensus       111 ~~~l~~lh~~~i~h~dl~p~ni~~~~~~~~kl~--d~~~~~~~~~~~~~~~~~~~~~~y~ape~~~~~---~~~~~~Dv~  185 (256)
T cd08221         111 VSAVSYIHKAGILHRDIKTLNIFLTKAGLIKLG--DFGISKILGSEYSMAETVVGTPYYMSPELCQGV---KYNFKSDIW  185 (256)
T ss_pred             HHHHHHHHhCCccccCCChHhEEEeCCCCEEEC--cCcceEEcccccccccccCCCccccCHhhcCCC---CCCCcchhH
Confidence            446789999999999999999999999988888  99987432       224578899999998754   344789999


Q ss_pred             HHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHH
Q psy12581         79 SFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPI  147 (153)
Q Consensus        79 s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~  147 (153)
                      |+|++++++++|..||......+....+... ...+.+...+..+.+++.+||..+|++||+++++++.
T Consensus       186 slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~  253 (256)
T cd08221         186 ALGCVLYELLTLKRTFDATNPLNLVVKIVQG-NYTPVVSVYSSELISLVHSLLQQDPEKRPTADEVLDQ  253 (256)
T ss_pred             HHHHHHHHHHHCCCCCCCCCHHHHHHHHHcC-CCCCCccccCHHHHHHHHHHcccCcccCCCHHHHhhC
Confidence            9999999999999999776655554444332 2333445678899999999999999999999999864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=99.91  E-value=5.5e-24  Score=144.80  Aligned_cols=142  Identities=21%  Similarity=0.304  Sum_probs=105.2

Q ss_pred             chhhHHhhhhc-CCCCCCCeeeeeeeeccccchhhcccccccccccC------CcccCCcccCccccccCC-CCCCcchh
Q psy12581          4 KKIVYSFYLNS-KKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQR------GRCYYPAWMSPEALQKKP-GDRNLEAC   75 (153)
Q Consensus         4 ~~~~~~~~lh~-~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~------~~~~~~~~~~pe~~~~~~-~~~~~~~~   75 (153)
                      ...-+..|||+ .++.|+||.+.||+++.++.+++.  |||.+....      ...++..|++||.+.+.. ....+.++
T Consensus       122 ~i~~~l~~lH~~~~i~H~dl~p~nill~~~~~~kL~--dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~  199 (296)
T cd06618         122 AIVKALHYLKEKHGVIHRDVKPSNILLDASGNVKLC--DFGISGRLVDSKAKTRSAGCAAYMAPERIDPPDPNPKYDIRA  199 (296)
T ss_pred             HHHHHHHHHHhhCCEecCCCcHHHEEEcCCCCEEEC--ccccchhccCCCcccCCCCCccccCHhhcCCCCCccccccch
Confidence            34456789997 599999999999999999988888  999874321      224567899999987543 22356789


Q ss_pred             hHHHHHHHHHHHHhCCCCCCCCCch-hhhHHHHhhcc-ccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHH
Q psy12581         76 DMWSFAVLLWELATREVPFADLTPM-EVGMKVALEGL-RITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPI  147 (153)
Q Consensus        76 dv~s~g~~~~~~~~g~~p~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~  147 (153)
                      |+||+|++++++++|+.||...... +.......... ..+.....+..+.+++.+||..+|++||+++++++.
T Consensus       200 Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~  273 (296)
T cd06618         200 DVWSLGISLVELATGQFPYKNCKTEFEVLTKILQEEPPSLPPNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQH  273 (296)
T ss_pred             hHHHHHHHHHHHHhCCCCCCcchhHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence            9999999999999999999664332 22222222211 112222467899999999999999999999999753

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=99.91  E-value=5e-24  Score=143.86  Aligned_cols=137  Identities=13%  Similarity=0.072  Sum_probs=101.9

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccccC------CcccCCcccCccccccCCCCCCcchhhHH
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQR------GRCYYPAWMSPEALQKKPGDRNLEACDMW   78 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~------~~~~~~~~~~pe~~~~~~~~~~~~~~dv~   78 (153)
                      ..-++.|||++++.|+||.+.||+++. +.+|+.  |||.+....      ...++..|++||.+...  ...+.++|+|
T Consensus       109 i~~~L~~LH~~~i~H~dl~p~ni~l~~-~~~kl~--dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~~Di~  183 (282)
T cd07831         109 LLKSLDHMHRNGIFHRDIKPENILIKD-DILKLA--DFGSCRGIYSKPPYTEYISTRWYRAPECLLTD--GYYGPKMDIW  183 (282)
T ss_pred             HHHHHHHHHHCCceecccCHHHEEEcC-CCeEEE--ecccccccccCCCcCCCCCCcccCChhHhhcC--CCCCcchhHH
Confidence            345689999999999999999999999 877777  999884331      22467789999976542  2345789999


Q ss_pred             HHHHHHHHHHhCCCCCCCCCchhhhHHHHhh----------------ccccCC-----------CCCCCHHHHHHHHHHh
Q psy12581         79 SFAVLLWELATREVPFADLTPMEVGMKVALE----------------GLRITI-----------PPGISSHLSKLIRICM  131 (153)
Q Consensus        79 s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~----------------~~~~~~-----------~~~~~~~~~~l~~~cl  131 (153)
                      |+|++++++++|..||.+.+..+........                ......           ....+..+.+++.+||
T Consensus       184 slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l  263 (282)
T cd07831         184 AVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRKSRHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLL  263 (282)
T ss_pred             HHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHHHHhhcccccccccCcccccccHHHHcccccHHHHHHHHHHh
Confidence            9999999999999999775543322221110                000001           1235688999999999


Q ss_pred             cCCCCCCCCHHHHHH
Q psy12581        132 NEDPGKRPTFDMVLP  146 (153)
Q Consensus       132 ~~~p~~Rps~~~~l~  146 (153)
                      ..+|++||+++++++
T Consensus       264 ~~~P~~R~~~~~~l~  278 (282)
T cd07831         264 AYDPDERITAKQALR  278 (282)
T ss_pred             ccCcccccCHHHHhh
Confidence            999999999999875

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=99.91  E-value=1.1e-24  Score=153.00  Aligned_cols=135  Identities=24%  Similarity=0.288  Sum_probs=105.2

Q ss_pred             hhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc-------------------------------------
Q psy12581          6 IVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ-------------------------------------   48 (153)
Q Consensus         6 ~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~-------------------------------------   48 (153)
                      ..++.|||+++|.|+||++.||+++.++.+|+.  |||++...                                     
T Consensus       111 ~~al~~lH~~~ivHrDlKp~NILl~~~g~~kL~--DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  188 (382)
T cd05625         111 TCAVESVHKMGFIHRDIKPDNILIDRDGHIKLT--DFGLCTGFRWTHDSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDR  188 (382)
T ss_pred             HHHHHHHHhCCeecCCCCHHHEEECCCCCEEEe--ECCCCcccccccccccccccccccccccccccccccccccccccc
Confidence            457899999999999999999999999999988  99985210                                     


Q ss_pred             -----------------CCcccCCcccCccccccCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhcc
Q psy12581         49 -----------------RGRCYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGL  111 (153)
Q Consensus        49 -----------------~~~~~~~~~~~pe~~~~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~  111 (153)
                                       ...+||+.|+|||.+.+.   .++.++|+||+|+++|++++|..||.+.........+.....
T Consensus       189 ~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~---~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~  265 (382)
T cd05625         189 LKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRT---GYTQLCDWWSVGVILYEMLVGQPPFLAQTPLETQMKVINWQT  265 (382)
T ss_pred             ccchhhhhccccccccccccccCcccCCHHHhcCC---CCCCeeeEEechHHHHHHHhCCCCCCCCCHHHHHHHHHccCC
Confidence                             123588999999998764   345789999999999999999999988766555544443222


Q ss_pred             ccCCC--CCCCHHHHHHHHHHhcCCCCCCCC---HHHHHH
Q psy12581        112 RITIP--PGISSHLSKLIRICMNEDPGKRPT---FDMVLP  146 (153)
Q Consensus       112 ~~~~~--~~~~~~~~~l~~~cl~~~p~~Rps---~~~~l~  146 (153)
                      ....|  ...++++.+++.+|+ .+|.+|++   ++++++
T Consensus       266 ~~~~p~~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~  304 (382)
T cd05625         266 SLHIPPQAKLSPEASDLIIKLC-RGPEDRLGKNGADEIKA  304 (382)
T ss_pred             CcCCCCcccCCHHHHHHHHHHc-cCHhHcCCCCCHHHHhc
Confidence            22223  457889999999876 58999987   777664

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.91  E-value=1.3e-23  Score=140.26  Aligned_cols=139  Identities=24%  Similarity=0.335  Sum_probs=103.4

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeecccc-------chhhcccccccccccC---CcccCCcccCccccccCCCCCCcch
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDL-------TARINMADAQFSFQQR---GRCYYPAWMSPEALQKKPGDRNLEA   74 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~-------~~kl~~~d~g~~~~~~---~~~~~~~~~~pe~~~~~~~~~~~~~   74 (153)
                      ..-++.|||++++.|+||.+.||+++.++       .+++.  |||++....   ...++..|++||.+.... ...+.+
T Consensus       110 i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~--Dfg~a~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~~  186 (259)
T cd05037         110 LASALHYLEDKKLVHGNVCGKNILVARYGLNEGYVPFIKLS--DPGIPITVLSREERVERIPWIAPECIRNGQ-ASLTIA  186 (259)
T ss_pred             HHHHHHHHhhCCeecccCccceEEEecCccccCCceeEEeC--CCCcccccccccccccCCCccChhhhcCCC-CCcchh
Confidence            34467899999999999999999999887       56666  999885432   234567899999987531 235588


Q ss_pred             hhHHHHHHHHHHHHh-CCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHh
Q psy12581         75 CDMWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILD  149 (153)
Q Consensus        75 ~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~  149 (153)
                      +|+||+|++++++++ |..|+........... ....  ...+......+.+++.+||..+|++||++.++++.|.
T Consensus       187 ~Di~slG~~~~~l~~~~~~p~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~  259 (259)
T cd05037         187 ADKWSFGTTLLEICSNGEEPLSTLSSSEKERF-YQDQ--HRLPMPDCAELANLINQCWTYDPTKRPSFRAILRDLN  259 (259)
T ss_pred             hHHHHHHHHHHHHHhCCCCCcccCCchhHHHH-HhcC--CCCCCCCchHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence            999999999999998 5778766643332221 1121  1122223478999999999999999999999998763

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>KOG4717|consensus

Probab=99.91  E-value=2.4e-24  Score=150.95  Aligned_cols=134  Identities=22%  Similarity=0.288  Sum_probs=113.1

Q ss_pred             hHHhhhhcCCCCCCCeeeeee-eeccccchhhcccccccc------cccCCcccCCcccCccccccCCCCCCcchhhHHH
Q psy12581          7 VYSFYLNSKKSKTSNAFLFCC-QIDEDLTARINMADAQFS------FQQRGRCYYPAWMSPEALQKKPGDRNLEACDMWS   79 (153)
Q Consensus         7 ~~~~~lh~~~i~~~ni~~~~~-~~~~~~~~kl~~~d~g~~------~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~dv~s   79 (153)
                      .+..|+|+..+.|+++++.|+ |+.+-|.+|+.  |||++      .+.++.||...|-+||++.+..+.  .++.|+||
T Consensus       129 ~AI~YCHqLHVVHRDLKPENVVFFEKlGlVKLT--DFGFSNkf~PG~kL~TsCGSLAYSAPEILLGDsYD--APAVDiWS  204 (864)
T KOG4717|consen  129 HAISYCHQLHVVHRDLKPENVVFFEKLGLVKLT--DFGFSNKFQPGKKLTTSCGSLAYSAPEILLGDSYD--APAVDIWS  204 (864)
T ss_pred             HHHHHHhhhhhhcccCCcceeEEeeecCceEee--eccccccCCCcchhhcccchhhccCchhhhcCccC--CcchhhhH
Confidence            456789987777888777776 45677888888  99998      344677999999999999886544  37899999


Q ss_pred             HHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581         80 FAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus        80 ~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      +|+++|.+++|++||...++.+.+-.++.-  ....|...+.++++++..||+.||.+|.+.++|..
T Consensus       205 LGVILyMLVCGq~PFqeANDSETLTmImDC--KYtvPshvS~eCrdLI~sMLvRdPkkRAslEeI~s  269 (864)
T KOG4717|consen  205 LGVILYMLVCGQPPFQEANDSETLTMIMDC--KYTVPSHVSKECRDLIQSMLVRDPKKRASLEEIVS  269 (864)
T ss_pred             HHHHHHHHHhCCCccccccchhhhhhhhcc--cccCchhhhHHHHHHHHHHHhcCchhhccHHHHhc
Confidence            999999999999999999988888777755  34568889999999999999999999999999863

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=99.91  E-value=4.3e-24  Score=142.99  Aligned_cols=137  Identities=20%  Similarity=0.315  Sum_probs=105.1

Q ss_pred             hhhHHhhhhc-CCCCCCCeeeeeeeeccccchhhccccccccccc-----CCcccCCcccCccccccCCCCCCcchhhHH
Q psy12581          5 KIVYSFYLNS-KKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ-----RGRCYYPAWMSPEALQKKPGDRNLEACDMW   78 (153)
Q Consensus         5 ~~~~~~~lh~-~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~-----~~~~~~~~~~~pe~~~~~~~~~~~~~~dv~   78 (153)
                      ..-+..|||. .++.|+||.+.||+++.++.+++.  |||.+...     ....++..|++||.+.+.   ..+.++|+|
T Consensus       109 l~~~l~~lH~~~~i~H~dl~~~ni~~~~~~~~~l~--d~g~~~~~~~~~~~~~~~~~~y~~PE~~~~~---~~~~~~Dv~  183 (265)
T cd06605         109 VLKGLTYLHEKHKIIHRDVKPSNILVNSRGQIKLC--DFGVSGQLVNSLAKTFVGTSSYMAPERIQGN---DYSVKSDIW  183 (265)
T ss_pred             HHHHHHHHcCCCCeecCCCCHHHEEECCCCCEEEe--ecccchhhHHHHhhcccCChhccCHHHHcCC---CCCchhhHH
Confidence            3456789999 999999999999999999988888  99987332     124677889999998764   445889999


Q ss_pred             HHHHHHHHHHhCCCCCCCCC----chhhhHHHHhhccccCCCCC-CCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581         79 SFAVLLWELATREVPFADLT----PMEVGMKVALEGLRITIPPG-ISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus        79 s~g~~~~~~~~g~~p~~~~~----~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      |+|++++++++|..||....    ..............+..+.. .+..+.+++.+||..+|++|||+.+++.
T Consensus       184 slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~  256 (265)
T cd06605         184 SLGLSLIELATGRFPYPPENDPPDGIFELLQYIVNEPPPRLPSGKFSPDFQDFVNLCLIKDPRERPSYKELLE  256 (265)
T ss_pred             HHHHHHHHHHhCCCCCCccccccccHHHHHHHHhcCCCCCCChhhcCHHHHHHHHHHcCCCchhCcCHHHHhh
Confidence            99999999999999986542    11111111122223333444 7889999999999999999999999874

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=99.91  E-value=3.6e-24  Score=144.66  Aligned_cols=139  Identities=19%  Similarity=0.260  Sum_probs=105.4

Q ss_pred             hhhHHhhhhcC-CCCCCCeeeeeeeeccccchhhccccccccccc------CCcccCCcccCccccccCCC-CCCcchhh
Q psy12581          5 KIVYSFYLNSK-KSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ------RGRCYYPAWMSPEALQKKPG-DRNLEACD   76 (153)
Q Consensus         5 ~~~~~~~lh~~-~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~------~~~~~~~~~~~pe~~~~~~~-~~~~~~~d   76 (153)
                      .+-+..|||++ ++.|+||.+.||+++.++.+|+.  |||.+...      ....++..|++||.+.+... ..++.++|
T Consensus       112 i~~~l~~lH~~~~i~h~dlkp~nil~~~~~~~kl~--dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~D  189 (283)
T cd06617         112 IVKALEYLHSKLSVIHRDVKPSNVLINRNGQVKLC--DFGISGYLVDSVAKTIDAGCKPYMAPERINPELNQKGYDVKSD  189 (283)
T ss_pred             HHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEe--ecccccccccccccccccCCccccChhhcCCcccccccCcccc
Confidence            44567999987 99999999999999999988888  99987432      12356778999998864222 23467899


Q ss_pred             HHHHHHHHHHHHhCCCCCCCCCch-hhhHHHHhhccccCCC-CCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581         77 MWSFAVLLWELATREVPFADLTPM-EVGMKVALEGLRITIP-PGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus        77 v~s~g~~~~~~~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      +|++|++++++++|+.||...... ....... .......+ ...+..+.+++.+||..+|++||++.++++
T Consensus       190 i~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~  260 (283)
T cd06617         190 VWSLGITMIELATGRFPYDSWKTPFQQLKQVV-EEPSPQLPAEKFSPEFQDFVNKCLKKNYKERPNYPELLQ  260 (283)
T ss_pred             chhhHHHHHHHHhCCCCCCccccCHHHHHHHH-hcCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            999999999999999999654322 2222222 22223333 346889999999999999999999999975

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=99.91  E-value=2.1e-24  Score=148.03  Aligned_cols=138  Identities=20%  Similarity=0.137  Sum_probs=97.9

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeee----ccccchhhccccccccccc----------CCcccCCcccCccccccCCCCC
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQI----DEDLTARINMADAQFSFQQ----------RGRCYYPAWMSPEALQKKPGDR   70 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~----~~~~~~kl~~~d~g~~~~~----------~~~~~~~~~~~pe~~~~~~~~~   70 (153)
                      ..-++.|||++++.|+||++.||++    +.++.+|+.  |||++...          ....+++.|++||.+.+.  ..
T Consensus       117 i~~aL~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~--DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~--~~  192 (317)
T cd07867         117 ILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIA--DMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGA--RH  192 (317)
T ss_pred             HHHHHHHHHhCCEEcCCCCHHHEEEccCCCCCCcEEEe--eccceeccCCCcccccccCcceecccccCcHHhcCC--Cc
Confidence            3457899999999999999999999    455677777  99998432          123567889999998653  23


Q ss_pred             CcchhhHHHHHHHHHHHHhCCCCCCCCCch---------hhhHHHHhh-c----------------------c-cc----
Q psy12581         71 NLEACDMWSFAVLLWELATREVPFADLTPM---------EVGMKVALE-G----------------------L-RI----  113 (153)
Q Consensus        71 ~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~---------~~~~~~~~~-~----------------------~-~~----  113 (153)
                      ++.++|+||+|++++++++|+.||......         ......... +                      . ..    
T Consensus       193 ~~~~~DiwSlG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  272 (317)
T cd07867         193 YTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQLDRIFSVMGFPADKDWEDIRKMPEYPTLQKDFRRTTYAN  272 (317)
T ss_pred             cCcHHHHHhHHHHHHHHHhCCCCcccccccccccccccHHHHHHHHHhcCCCChhhhhhhhhcccchhhhhhhcccccCC
Confidence            458899999999999999999998643211         000000000 0                      0 00    


Q ss_pred             --------CCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581        114 --------TIPPGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus       114 --------~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                              ......+..+.+++.+||+.||.+|||+.++++
T Consensus       273 ~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~R~t~~e~l~  313 (317)
T cd07867         273 SSLIKYMEKHKVKPDSKVFLLLQKLLTMDPTKRITSEQALQ  313 (317)
T ss_pred             chhhhhhhcccCCCChHHHHHHHHHhccCcccccCHHHHhc
Confidence                    001123456888999999999999999999875

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=99.91  E-value=7.7e-24  Score=143.18  Aligned_cols=138  Identities=17%  Similarity=0.196  Sum_probs=103.3

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccccC-------CcccCCcccCccccccCCCCCCcchhhH
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQR-------GRCYYPAWMSPEALQKKPGDRNLEACDM   77 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~-------~~~~~~~~~~pe~~~~~~~~~~~~~~dv   77 (153)
                      ..-++.|||+.++.|+||.+.||+++.++.+++.  |||++....       ...++..|++||.+.+.  ..++.++|+
T Consensus       109 l~~~l~~LH~~~i~H~dl~p~nil~~~~~~~~l~--dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~--~~~~~~~Di  184 (286)
T cd07847         109 TLQAVNFCHKHNCIHRDVKPENILITKQGQIKLC--DFGFARILTGPGDDYTDYVATRWYRAPELLVGD--TQYGPPVDV  184 (286)
T ss_pred             HHHHHHHHHHCCceecCCChhhEEEcCCCcEEEC--ccccceecCCCcccccCcccccccCCHHHHhCC--CCcCchhhh
Confidence            3456789999999999999999999999988888  999884332       22466789999987642  134578999


Q ss_pred             HHHHHHHHHHHhCCCCCCCCCchhhhHHHHhh-------------------ccccCC----------CCCCCHHHHHHHH
Q psy12581         78 WSFAVLLWELATREVPFADLTPMEVGMKVALE-------------------GLRITI----------PPGISSHLSKLIR  128 (153)
Q Consensus        78 ~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~-------------------~~~~~~----------~~~~~~~~~~l~~  128 (153)
                      ||+|++++++++|..||.+....+....+...                   ....+.          -...+..+.+++.
T Consensus       185 ~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  264 (286)
T cd07847         185 WAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQFFKGLSIPEPETREPLESKFPNISSPALSFLK  264 (286)
T ss_pred             HHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcccccccccccCCCcccccCHHHHhccCCHHHHHHHH
Confidence            99999999999999999876544332221110                   000000          0235678999999


Q ss_pred             HHhcCCCCCCCCHHHHHH
Q psy12581        129 ICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus       129 ~cl~~~p~~Rps~~~~l~  146 (153)
                      +||+.+|++||++.+++.
T Consensus       265 ~~l~~~p~~Rp~~~eil~  282 (286)
T cd07847         265 GCLQMDPTERLSCEELLE  282 (286)
T ss_pred             HHhcCCccccCCHHHHhc
Confidence            999999999999998875

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=99.91  E-value=5e-24  Score=143.62  Aligned_cols=137  Identities=18%  Similarity=0.324  Sum_probs=104.6

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc-------CCcccCCcccCccccccCCCCCCcchhhH
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ-------RGRCYYPAWMSPEALQKKPGDRNLEACDM   77 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~-------~~~~~~~~~~~pe~~~~~~~~~~~~~~dv   77 (153)
                      ..-++.|||++++.|+||.++||+++.++.+++.  |||.+...       ....++..|++||.+...  ...+.++|+
T Consensus       110 i~~~l~~lh~~~i~H~dl~p~ni~i~~~~~~~l~--dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~~Dv  185 (277)
T cd06917         110 VLVALKYIHKVGVIHRDIKAANILVTNTGNVKLC--DFGVAALLNQNSSKRSTFVGTPYWMAPEVITEG--KYYDTKADI  185 (277)
T ss_pred             HHHHHHHHHhCCcccCCcCHHHEEEcCCCCEEEc--cCCceeecCCCccccccccCCcceeCHHHhccC--CccccchhH
Confidence            3456789999999999999999999999988888  99987432       123567789999987642  234578999


Q ss_pred             HHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCCC-CCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581         78 WSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPP-GISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus        78 ~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      |++|+++|++++|..||.+.......... .....+..+. ..+..+.+++.+||..+|++||++.+++.
T Consensus       186 ~slG~~l~~ll~g~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~il~  254 (277)
T cd06917         186 WSLGITIYEMATGNPPYSDVDAFRAMMLI-PKSKPPRLEDNGYSKLLREFVAACLDEEPKERLSAEELLK  254 (277)
T ss_pred             HHHHHHHHHHHhCCCCCCCCChhhhhhcc-ccCCCCCCCcccCCHHHHHHHHHHcCCCcccCcCHHHHhh
Confidence            99999999999999999776544332211 1111222233 37789999999999999999999999975

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=99.91  E-value=6.5e-24  Score=143.52  Aligned_cols=138  Identities=15%  Similarity=0.145  Sum_probs=103.3

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccccC-------CcccCCcccCccccccCCCCCCcchhhH
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQR-------GRCYYPAWMSPEALQKKPGDRNLEACDM   77 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~-------~~~~~~~~~~pe~~~~~~~~~~~~~~dv   77 (153)
                      ..-++.|||++++.|+||.+.||+++.++.+++.  |||.+....       ...++..|++||.+.+..  ..+.++|+
T Consensus       109 i~~~l~~lh~~~i~H~~l~p~nill~~~~~~~l~--dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~--~~~~~~Dv  184 (284)
T cd07860         109 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLA--DFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCK--YYSTAVDI  184 (284)
T ss_pred             HHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEe--eccchhhcccCccccccccccccccCCeEEecCC--CCCcHHHH
Confidence            4557899999999999999999999999988888  999874321       224567899999876532  23578999


Q ss_pred             HHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhcccc---------------------------CCCCCCCHHHHHHHHHH
Q psy12581         78 WSFAVLLWELATREVPFADLTPMEVGMKVALEGLRI---------------------------TIPPGISSHLSKLIRIC  130 (153)
Q Consensus        78 ~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~~~~l~~~c  130 (153)
                      ||+|++++++++|+.||.+................+                           ......+..+.+++.+|
T Consensus       185 ~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  264 (284)
T cd07860         185 WSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSLPDYKPSFPKWARQDFSKVVPPLDEDGRDLLSQM  264 (284)
T ss_pred             HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhhhhHHHHHHhhcccccccCHHHHcccCCHHHHHHHHHh
Confidence            999999999999999997655433322221100000                           01123567889999999


Q ss_pred             hcCCCCCCCCHHHHHH
Q psy12581        131 MNEDPGKRPTFDMVLP  146 (153)
Q Consensus       131 l~~~p~~Rps~~~~l~  146 (153)
                      |+.||++||+++++++
T Consensus       265 l~~~P~~Rpt~~~~l~  280 (284)
T cd07860         265 LHYDPNKRISAKAALA  280 (284)
T ss_pred             cCCCcccCCCHHHHhc
Confidence            9999999999999875

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=99.91  E-value=4.5e-25  Score=154.67  Aligned_cols=136  Identities=21%  Similarity=0.214  Sum_probs=105.8

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc------------------------------------
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ------------------------------------   48 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~------------------------------------   48 (153)
                      ..-++.|||+++|.|+||++.||+++.++.+++.  |||++...                                    
T Consensus       110 i~~al~~lH~~~ivHrDlkp~Nill~~~~~ikL~--DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (376)
T cd05598         110 LTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLT--DFGLCTGFRWTHDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKP  187 (376)
T ss_pred             HHHHHHHHHHCCeEeCCCCHHHEEECCCCCEEEE--eCCCCccccccccccccccccccccccccccccccccccccccc
Confidence            3457899999999999999999999999998888  99985210                                    


Q ss_pred             --------------CCcccCCcccCccccccCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccC
Q psy12581         49 --------------RGRCYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRIT  114 (153)
Q Consensus        49 --------------~~~~~~~~~~~pe~~~~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~  114 (153)
                                    ....|++.|+|||.+.+.   .++.++|+||+|+++|++++|+.||.+.........+........
T Consensus       188 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~  264 (376)
T cd05598         188 LERRRKRQHQRCLAHSLVGTPNYIAPEVLLRT---GYTQLCDWWSVGVILYEMLVGQPPFLADTPAETQLKVINWETTLH  264 (376)
T ss_pred             hhhhhhhhcccccccccCCCccccCHHHHcCC---CCCcceeeeeccceeeehhhCCCCCCCCCHHHHHHHHhccCcccc
Confidence                          123688999999998764   345789999999999999999999988766554444332222222


Q ss_pred             C--CCCCCHHHHHHHHHHhcCCCCCCC---CHHHHHH
Q psy12581        115 I--PPGISSHLSKLIRICMNEDPGKRP---TFDMVLP  146 (153)
Q Consensus       115 ~--~~~~~~~~~~l~~~cl~~~p~~Rp---s~~~~l~  146 (153)
                      .  ....+..+.+++.+|+ .+|.+|+   ++.++++
T Consensus       265 ~~~~~~~s~~~~~li~~l~-~~p~~R~~~~t~~ell~  300 (376)
T cd05598         265 IPSQAKLSREASDLILRLC-CGAEDRLGKNGADEIKA  300 (376)
T ss_pred             CCCCCCCCHHHHHHHHHHh-cCHhhcCCCCCHHHHhC
Confidence            2  3357889999999976 5999999   8888874

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=99.91  E-value=3.8e-24  Score=148.91  Aligned_cols=137  Identities=18%  Similarity=0.128  Sum_probs=102.8

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccccC------CcccCCcccCccccccCCCCCCcchhhHH
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQR------GRCYYPAWMSPEALQKKPGDRNLEACDMW   78 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~------~~~~~~~~~~pe~~~~~~~~~~~~~~dv~   78 (153)
                      ..-++.|||.+++.|+||.+.||+++.++.+++.  |||.+....      ...++..|++||.+.+.   .++.++|+|
T Consensus       127 l~~aL~~LH~~gi~H~dlkp~Nil~~~~~~~kL~--Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Dvw  201 (353)
T cd07850         127 MLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKIL--DFGLARTAGTSFMMTPYVVTRYYRAPEVILGM---GYKENVDIW  201 (353)
T ss_pred             HHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEc--cCccceeCCCCCCCCCCcccccccCHHHHhCC---CCCCchhhH
Confidence            3457899999999999999999999999988888  999985432      23467789999998764   345889999


Q ss_pred             HHHHHHHHHHhCCCCCCCCCchhhhHHHHhh----------------------cccc-------------------CCCC
Q psy12581         79 SFAVLLWELATREVPFADLTPMEVGMKVALE----------------------GLRI-------------------TIPP  117 (153)
Q Consensus        79 s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~----------------------~~~~-------------------~~~~  117 (153)
                      |+|++++++++|+.||...+.......+...                      ....                   ..+.
T Consensus       202 slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  281 (353)
T cd07850         202 SVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNK  281 (353)
T ss_pred             hHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccc
Confidence            9999999999999999765433222211100                      0000                   0011


Q ss_pred             CCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581        118 GISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus       118 ~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      ..+..+.+++.+||+.||++|||+.++++
T Consensus       282 ~~~~~~~~li~~~L~~dP~~R~t~~eiL~  310 (353)
T cd07850         282 LKASQARDLLSKMLVIDPEKRISVDDALQ  310 (353)
T ss_pred             cchhHHHHHHHHHcCCChhhCcCHHHHhc
Confidence            23556899999999999999999999984

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=99.91  E-value=6.5e-24  Score=142.50  Aligned_cols=139  Identities=22%  Similarity=0.300  Sum_probs=105.7

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeecc-ccchhhccccccccccc-------CCcccCCcccCccccccCCCCCCcchhh
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDE-DLTARINMADAQFSFQQ-------RGRCYYPAWMSPEALQKKPGDRNLEACD   76 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~-~~~~kl~~~d~g~~~~~-------~~~~~~~~~~~pe~~~~~~~~~~~~~~d   76 (153)
                      ..-+..|||++++.|+||.+.||+++. ++.+++.  |||.+...       ....++..|++||.+..... ..+.++|
T Consensus       117 i~~al~~lH~~~i~h~dl~p~nil~~~~~~~~~l~--dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~-~~~~~~D  193 (268)
T cd06624         117 ILEGLKYLHDNQIVHRDIKGDNVLVNTYSGVVKIS--DFGTSKRLAGINPCTETFTGTLQYMAPEVIDKGPR-GYGAPAD  193 (268)
T ss_pred             HHHHHHHHHHCCEeecCCCHHHEEEcCCCCeEEEe--cchhheecccCCCccccCCCCccccChhhhccccc-cCCchhh
Confidence            455678999999999999999999986 5677777  99987432       12346789999999864321 2457899


Q ss_pred             HHHHHHHHHHHHhCCCCCCCCCchhhh-HHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581         77 MWSFAVLLWELATREVPFADLTPMEVG-MKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus        77 v~s~g~~~~~~~~g~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      +||+|++++++++|..||......... .........+..|...+..+.+++.+||+.+|++|||+.++++
T Consensus       194 v~slGvvl~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~  264 (268)
T cd06624         194 IWSLGCTIVEMATGKPPFIELGEPQAAMFKVGMFKIHPEIPESLSAEAKNFILRCFEPDPDKRASAHDLLQ  264 (268)
T ss_pred             hHHHHHHHHHHHhCCCCCccccChhhhHhhhhhhccCCCCCcccCHHHHHHHHHHcCCCchhCCCHHHHHh
Confidence            999999999999999999764432221 1111122234456678889999999999999999999999875

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>KOG0610|consensus

Probab=99.91  E-value=6.9e-24  Score=144.32  Aligned_cols=137  Identities=20%  Similarity=0.264  Sum_probs=115.8

Q ss_pred             chhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc-----------------------------------
Q psy12581          4 KKIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ-----------------------------------   48 (153)
Q Consensus         4 ~~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~-----------------------------------   48 (153)
                      ...+|++|||-.||+-+|+++.||+|.++|++-++  ||.++...                                   
T Consensus       187 Evl~ALEYLHmlGivYRDLKPENILvredGHIMLs--DFDLS~~~~~~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~  264 (459)
T KOG0610|consen  187 EVLLALEYLHMLGIVYRDLKPENILVREDGHIMLS--DFDLSLRCPVSPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLS  264 (459)
T ss_pred             HHHHHHHHHHhhceeeccCCcceeEEecCCcEEee--eccccccCCCCCeeeccCCCCCCCCCcccccccccccccchhc
Confidence            45789999999999999999999999999999888  87766100                                   


Q ss_pred             ----------------------------CCcccCCcccCccccccCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCch
Q psy12581         49 ----------------------------RGRCYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPM  100 (153)
Q Consensus        49 ----------------------------~~~~~~~~~~~pe~~~~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~  100 (153)
                                                  ....||-.|+|||++.+..++   .+.|.|.||+++|||+.|..||.+.+..
T Consensus       265 ~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~GHg---sAVDWWtfGIflYEmLyG~TPFKG~~~~  341 (459)
T KOG0610|consen  265 SSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEGHG---SAVDWWTFGIFLYEMLYGTTPFKGSNNK  341 (459)
T ss_pred             cccccccccccccccchhhhcCCCCccccccccccccccceeeecCCCC---chhhHHHHHHHHHHHHhCCCCcCCCCch
Confidence                                        012567789999999986444   7899999999999999999999999999


Q ss_pred             hhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCC----HHHHH
Q psy12581        101 EVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPT----FDMVL  145 (153)
Q Consensus       101 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps----~~~~l  145 (153)
                      +.+..++.+....+.....+..++++|+++|..||++|..    +.+|-
T Consensus       342 ~Tl~NIv~~~l~Fp~~~~vs~~akDLIr~LLvKdP~kRlg~~rGA~eIK  390 (459)
T KOG0610|consen  342 ETLRNIVGQPLKFPEEPEVSSAAKDLIRKLLVKDPSKRLGSKRGAAEIK  390 (459)
T ss_pred             hhHHHHhcCCCcCCCCCcchhHHHHHHHHHhccChhhhhccccchHHhh
Confidence            9999998887766655577899999999999999999987    66553

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=99.91  E-value=9.5e-24  Score=142.90  Aligned_cols=139  Identities=18%  Similarity=0.302  Sum_probs=106.9

Q ss_pred             hhHHhhhhc-CCCCCCCeeeeeeeeccccchhhccccccccccc-----CCcccCCcccCccccccCCC---CCCcchhh
Q psy12581          6 IVYSFYLNS-KKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ-----RGRCYYPAWMSPEALQKKPG---DRNLEACD   76 (153)
Q Consensus         6 ~~~~~~lh~-~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~-----~~~~~~~~~~~pe~~~~~~~---~~~~~~~d   76 (153)
                      .-+..|||+ .++.|+||.+.||+++.++.+++.  |||.+...     ....++..|++||.+.+...   ..++.++|
T Consensus       112 ~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~--dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~D  189 (286)
T cd06622         112 VKGLKFLKEEHNIIHRDVKPTNVLVNGNGQVKLC--DFGVSGNLVASLAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSD  189 (286)
T ss_pred             HHHHHHHHhcCCEeeCCCCHHHEEECCCCCEEEe--ecCCcccccCCccccCCCccCccCcchhcCCCCCccCCCCcccc
Confidence            346789996 599999999999999999888888  99987432     22356778999998864321   12457899


Q ss_pred             HHHHHHHHHHHHhCCCCCCCCCchhhhHHH--HhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581         77 MWSFAVLLWELATREVPFADLTPMEVGMKV--ALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus        77 v~s~g~~~~~~~~g~~p~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      +||+|++++++++|..||............  .........+...+..+.+++.+||+.+|++||+++++++
T Consensus       190 iwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~  261 (286)
T cd06622         190 VWSLGLSILEMALGRYPYPPETYANIFAQLSAIVDGDPPTLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLE  261 (286)
T ss_pred             hHhHHHHHHHHHhCCCCCCCcchhhHHHHHHHHhhcCCCCCCcccCHHHHHHHHHHcccCcccCCCHHHHhc
Confidence            999999999999999999765443332221  1223344556678899999999999999999999999986

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=99.91  E-value=7.2e-24  Score=142.51  Aligned_cols=139  Identities=22%  Similarity=0.314  Sum_probs=106.3

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccccC---------CcccCCcccCccccccCCCCCCcchh
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQR---------GRCYYPAWMSPEALQKKPGDRNLEAC   75 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~---------~~~~~~~~~~pe~~~~~~~~~~~~~~   75 (153)
                      .+-++.|||+.++.|+||.+.||+++.++.+++.  |||.+....         ...++..|++||.+.... ...+.++
T Consensus       117 i~~~l~~lH~~~i~H~dl~~~nil~~~~~~~~l~--d~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~-~~~~~~~  193 (272)
T cd06629         117 VLEGLAYLHSKGILHRDLKADNLLVDADGICKIS--DFGISKKSDDIYDNDQNMSMQGSVFWMAPEVIHSYS-QGYSAKV  193 (272)
T ss_pred             HHHHHHHHhhCCeeecCCChhhEEEcCCCeEEEe--eccccccccccccccccccccCCccccCHHHhcccc-CCCCccc
Confidence            3456789999999999999999999999988888  999874332         124677899999876532 1345789


Q ss_pred             hHHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCCC----CCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581         76 DMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPP----GISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus        76 dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      |+||+|++++++++|..||.....................+.    .++..+.+++.+||..+|+.||+++++++
T Consensus       194 Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  268 (272)
T cd06629         194 DIWSLGCVVLEMFAGRRPWSDEEAIAAMFKLGNKRSAPPIPPDVSMNLSPVALDFLNACFTINPDNRPTARELLQ  268 (272)
T ss_pred             hhHHHHHHHHHHHhCCCCCcCcchHHHHHHhhccccCCcCCccccccCCHHHHHHHHHHhcCChhhCCCHHHHhh
Confidence            999999999999999999976544433333222222222222    35789999999999999999999999875

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>KOG0611|consensus

Probab=99.91  E-value=3.7e-24  Score=146.31  Aligned_cols=135  Identities=23%  Similarity=0.310  Sum_probs=113.7

Q ss_pred             hHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccc------cccCCcccCCcccCccccccCCCCCCcchhhHHHH
Q psy12581          7 VYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFS------FQQRGRCYYPAWMSPEALQKKPGDRNLEACDMWSF   80 (153)
Q Consensus         7 ~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~------~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~dv~s~   80 (153)
                      -+..|+|.+++.|+++++.||++|.++.+|+.  |||++      ....+.||.+.|.+||++.+.++.  ++..|.||+
T Consensus       164 SAVhYCHknrVvHRDLKLENILLD~N~NiKIA--DFGLSNly~~~kfLqTFCGSPLYASPEIvNG~PY~--GPEVDsWsL  239 (668)
T KOG0611|consen  164 SAVHYCHKNRVVHRDLKLENILLDQNNNIKIA--DFGLSNLYADKKFLQTFCGSPLYASPEIVNGTPYK--GPEVDSWSL  239 (668)
T ss_pred             HHHHHHhhccceecccchhheeecCCCCeeee--ccchhhhhccccHHHHhcCCcccCCccccCCCCCC--CCccchhhH
Confidence            36789999999999999999999999999999  99998      234678999999999999987764  378999999


Q ss_pred             HHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHH
Q psy12581         81 AVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPIL  148 (153)
Q Consensus        81 g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L  148 (153)
                      |+++|.++.|..||.+.+......++....++-  | ..+....-+++.||..+|+.|.|++++....
T Consensus       240 GvLLYtLVyGtMPFDG~Dhk~lvrQIs~GaYrE--P-~~PSdA~gLIRwmLmVNP~RRATieDiAsHW  304 (668)
T KOG0611|consen  240 GVLLYTLVYGTMPFDGRDHKRLVRQISRGAYRE--P-ETPSDASGLIRWMLMVNPERRATIEDIASHW  304 (668)
T ss_pred             HHHHHHHhhcccccCCchHHHHHHHhhcccccC--C-CCCchHHHHHHHHHhcCcccchhHHHHhhhh
Confidence            999999999999999988777666655444432  2 2355678899999999999999999987643

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=99.90  E-value=5.8e-24  Score=142.12  Aligned_cols=138  Identities=18%  Similarity=0.157  Sum_probs=106.5

Q ss_pred             hhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc---CCcccCCcccCccccccCCCCCCcchhhHHHHHH
Q psy12581          6 IVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ---RGRCYYPAWMSPEALQKKPGDRNLEACDMWSFAV   82 (153)
Q Consensus         6 ~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~---~~~~~~~~~~~pe~~~~~~~~~~~~~~dv~s~g~   82 (153)
                      .-++.|||..++.|+|+.+.||+++.++.+++.  |||.+...   ....++..|++||.+.+..   .+.++|+|++|+
T Consensus       107 ~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~--dfg~~~~~~~~~~~~~~~~y~~pe~~~~~~---~~~~~Dv~slG~  181 (260)
T cd05611         107 VLGVEDLHQRGIIHRDIKPENLLIDQTGHLKLT--DFGLSRNGLENKKFVGTPDYLAPETILGVG---DDKMSDWWSLGC  181 (260)
T ss_pred             HHHHHHHHHCCeecCCCCHHHeEECCCCcEEEe--ecccceeccccccCCCCcCccChhhhcCCC---CcchhhhHHHHH
Confidence            346789999999999999999999999988888  99987432   2345778899999987542   457899999999


Q ss_pred             HHHHHHhCCCCCCCCCchhhhHHHHhhccc--cCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHH
Q psy12581         83 LLWELATREVPFADLTPMEVGMKVALEGLR--ITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPIL  148 (153)
Q Consensus        83 ~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L  148 (153)
                      +++++++|..||..................  .......+..+.+++.+||+.+|++||++.++.+.|
T Consensus       182 il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l  249 (260)
T cd05611         182 VIFEFLFGYPPFHAETPDAVFDNILSRRINWPEEVKEFCSPEAVDLINRLLCMDPAKRLGANGYQEIK  249 (260)
T ss_pred             HHHHHHHCCCCCCCCCHHHHHHHHHhcccCCCCcccccCCHHHHHHHHHHccCCHHHccCCCcHHHHH
Confidence            999999999999876655544433322221  122335788999999999999999999765444433

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=99.90  E-value=6.9e-24  Score=143.34  Aligned_cols=138  Identities=15%  Similarity=0.145  Sum_probs=103.7

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccccC-------CcccCCcccCccccccCCCCCCcchhhH
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQR-------GRCYYPAWMSPEALQKKPGDRNLEACDM   77 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~-------~~~~~~~~~~pe~~~~~~~~~~~~~~dv   77 (153)
                      ..-++.|||++++.|+||.+.||+++.++.+++.  |||.+....       ...++..|++||.+.+.  ...+.++|+
T Consensus       108 i~~~L~~lH~~~~~H~dl~p~nil~~~~~~~~l~--df~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~--~~~~~~~Di  183 (283)
T cd07835         108 LLQGIAYCHSHRVLHRDLKPQNLLIDREGALKLA--DFGLARAFGVPVRTYTHEVVTLWYRAPEILLGS--RQYSTPVDI  183 (283)
T ss_pred             HHHHHHHHHHCCeeCCCCCHHHEEEcCCCcEEEe--ecccccccCCCccccCccccccCCCCCceeecC--cccCcHHHH
Confidence            3456789999999999999999999999988888  999874331       22456789999987642  124578999


Q ss_pred             HHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhcc---------------------------ccCCCCCCCHHHHHHHHHH
Q psy12581         78 WSFAVLLWELATREVPFADLTPMEVGMKVALEGL---------------------------RITIPPGISSHLSKLIRIC  130 (153)
Q Consensus        78 ~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~~~~~~l~~~c  130 (153)
                      ||+|+++|++++|+.||...........+.....                           ........+..+.+++.+|
T Consensus       184 ~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  263 (283)
T cd07835         184 WSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSLPDYKPTFPKWARQDLSKVVPNLDEDGLDLLSKM  263 (283)
T ss_pred             HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhhhchhhhhhcccccccchhhhcCCCCHHHHHHHHHH
Confidence            9999999999999999976654333222211100                           0011234567899999999


Q ss_pred             hcCCCCCCCCHHHHHH
Q psy12581        131 MNEDPGKRPTFDMVLP  146 (153)
Q Consensus       131 l~~~p~~Rps~~~~l~  146 (153)
                      |+.+|++||+++++++
T Consensus       264 l~~~P~~Rpt~~~il~  279 (283)
T cd07835         264 LVYDPAKRISAKAALQ  279 (283)
T ss_pred             hcCChhhCcCHHHHhc
Confidence            9999999999999875

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=99.90  E-value=6.5e-24  Score=142.15  Aligned_cols=137  Identities=27%  Similarity=0.389  Sum_probs=106.0

Q ss_pred             hhHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccccC-----------CcccCCcccCccccccCCCCCCcch
Q psy12581          6 IVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQR-----------GRCYYPAWMSPEALQKKPGDRNLEA   74 (153)
Q Consensus         6 ~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~-----------~~~~~~~~~~pe~~~~~~~~~~~~~   74 (153)
                      .-+..|||++++.|+|+.+.||+++.++.+++.  |||++....           ...++..|++||.+...  ...+.+
T Consensus       112 ~~al~~lh~~~i~h~~l~p~ni~~~~~~~~~l~--df~~~~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~--~~~~~~  187 (267)
T cd06610         112 LKGLEYLHSNGQIHRDIKAGNILLGEDGSVKIA--DFGVSASLADGGDRTRKVRKTFVGTPCWMAPEVMEQV--HGYDFK  187 (267)
T ss_pred             HHHHHHHHhCCeecCCCCHHhEEEcCCCCEEEc--ccchHHHhccCccccccccccccCChhhcChHHHccc--cCcCcc
Confidence            446789999999999999999999999988888  999873221           12467789999998754  134578


Q ss_pred             hhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhcc-ccCCC---CCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581         75 CDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGL-RITIP---PGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus        75 ~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~---~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      +|+|++|++++++++|+.||................. .....   ...+..+.+++.+||+.+|++||+++++++
T Consensus       188 ~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~  263 (267)
T cd06610         188 ADIWSFGITAIELATGAAPYSKYPPMKVLMLTLQNDPPSLETGADYKKYSKSFRKMISLCLQKDPSKRPTAEELLK  263 (267)
T ss_pred             cchHhHhHHHHHHHhCCCCccccChhhhHHHHhcCCCCCcCCccccccccHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence            9999999999999999999987765554444333211 11111   246788999999999999999999999875

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=99.90  E-value=7.5e-24  Score=143.12  Aligned_cols=139  Identities=19%  Similarity=0.198  Sum_probs=106.3

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc-----CCcccCCcccCccccccCCCCCCcchhhHHH
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ-----RGRCYYPAWMSPEALQKKPGDRNLEACDMWS   79 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~-----~~~~~~~~~~~pe~~~~~~~~~~~~~~dv~s   79 (153)
                      -.-++.|||++++.|+||.+.||+++.++.+++.  |||++...     ....++..|++||.+.+.  ...+.++|+||
T Consensus       106 i~~al~~lH~~~ivH~dikp~Nil~~~~~~~~l~--dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~~Di~s  181 (279)
T cd05633         106 IILGLEHMHNRFVVYRDLKPANILLDEHGHVRIS--DLGLACDFSKKKPHASVGTHGYMAPEVLQKG--TAYDSSADWFS  181 (279)
T ss_pred             HHHHHHHHHHCCcCCCCCCHHHEEECCCCCEEEc--cCCcceeccccCccCcCCCcCccCHHHhcCC--CCCCchhhhHH
Confidence            3456899999999999999999999999988888  99987432     223678899999987532  23457899999


Q ss_pred             HHHHHHHHHhCCCCCCCCCchhhh-HHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCC-----CHHHHHHH
Q psy12581         80 FAVLLWELATREVPFADLTPMEVG-MKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRP-----TFDMVLPI  147 (153)
Q Consensus        80 ~g~~~~~~~~g~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----s~~~~l~~  147 (153)
                      +|++++++++|..||......... ............+...+..+.+++.+||..||++|+     +++++++.
T Consensus       182 lG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h  255 (279)
T cd05633         182 LGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTVNVELPDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEH  255 (279)
T ss_pred             HHHHHHHHHhCCCCcCCCCCcCHHHHHHHhhcCCcCCccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhC
Confidence            999999999999999754322211 111112223445667889999999999999999999     58888763

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=99.90  E-value=4.8e-25  Score=153.74  Aligned_cols=136  Identities=19%  Similarity=0.236  Sum_probs=105.2

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc------------------------------------
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ------------------------------------   48 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~------------------------------------   48 (153)
                      ...++.|||++++.|+||++.||+++.++.+++.  |||++...                                    
T Consensus       110 i~~~L~~lH~~givHrDLkp~NIli~~~~~vkL~--DfG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (360)
T cd05627         110 TVLAIDAIHQLGFIHRDIKPDNLLLDAKGHVKLS--DFGLCTGLKKAHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKK  187 (360)
T ss_pred             HHHHHHHHHHCCeEccCCCHHHEEECCCCCEEEe--eccCCcccccccccccccccccCCcccccccccccccccccccc
Confidence            3457899999999999999999999999998888  99986321                                    


Q ss_pred             ------CCcccCCcccCccccccCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCCC--CCC
Q psy12581         49 ------RGRCYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPP--GIS  120 (153)
Q Consensus        49 ------~~~~~~~~~~~pe~~~~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~--~~~  120 (153)
                            ...+||+.|+|||.+.+.   .++.++|+||+|+++|++++|..||.+.........+.........|.  ..+
T Consensus       188 ~~~~~~~~~~gt~~Y~APE~~~~~---~~~~~~DiwSlGvilyel~tG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s  264 (360)
T cd05627         188 NRRQLAYSTVGTPDYIAPEVFMQT---GYNKLCDWWSLGVIMYEMLIGYPPFCSETPQETYRKVMNWKETLVFPPEVPIS  264 (360)
T ss_pred             cccccccccCCCccccCHHHHcCC---CCCCcceeccccceeeecccCCCCCCCCCHHHHHHHHHcCCCceecCCCCCCC
Confidence                  123688999999998764   345789999999999999999999988776665555443222223333  368


Q ss_pred             HHHHHHHHHHhcCCCCCCCC---HHHHHH
Q psy12581        121 SHLSKLIRICMNEDPGKRPT---FDMVLP  146 (153)
Q Consensus       121 ~~~~~l~~~cl~~~p~~Rps---~~~~l~  146 (153)
                      ..+.+++.+++. +|.+|++   ++++++
T Consensus       265 ~~~~~li~~l~~-~p~~R~~~~~~~ei~~  292 (360)
T cd05627         265 EKAKDLILRFCT-DSENRIGSNGVEEIKS  292 (360)
T ss_pred             HHHHHHHHHhcc-ChhhcCCCCCHHHHhc
Confidence            899999999764 9999985   566553

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=99.90  E-value=1.2e-23  Score=140.14  Aligned_cols=135  Identities=22%  Similarity=0.300  Sum_probs=106.8

Q ss_pred             hhHHhhhhcCCCCCCCeeeeeeeecccc-chhhcccccccccccC------CcccCCcccCccccccCCCCCCcchhhHH
Q psy12581          6 IVYSFYLNSKKSKTSNAFLFCCQIDEDL-TARINMADAQFSFQQR------GRCYYPAWMSPEALQKKPGDRNLEACDMW   78 (153)
Q Consensus         6 ~~~~~~lh~~~i~~~ni~~~~~~~~~~~-~~kl~~~d~g~~~~~~------~~~~~~~~~~pe~~~~~~~~~~~~~~dv~   78 (153)
                      .-++.|||++++.|+||.+.||+++.++ .+++.  |||.+....      ...++..|++||.+.+.   ..+.++|+|
T Consensus       111 ~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~~l~--d~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Dv~  185 (256)
T cd08220         111 LLALHHVHTKLILHRDLKTQNILLDKHKMVVKIG--DFGISKILSSKSKAYTVVGTPCYISPELCEGK---PYNQKSDIW  185 (256)
T ss_pred             HHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEc--cCCCceecCCCccccccccCCcccCchhccCC---CCCcccchH
Confidence            4467899999999999999999998654 45777  999874332      23567789999998753   345789999


Q ss_pred             HHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581         79 SFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus        79 s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      |+|++++++++|..||.+............ ....+.+...+..+.+++.+||..+|++|||++++++
T Consensus       186 slG~~l~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~  252 (256)
T cd08220         186 ALGCVLYELASLKRAFEAANLPALVLKIMS-GTFAPISDRYSPDLRQLILSMLNLDPSKRPQLSQIMA  252 (256)
T ss_pred             HHHHHHHHHHhCCCCcccCchHHHHHHHHh-cCCCCCCCCcCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence            999999999999999987665554444332 2234456668899999999999999999999999875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=99.90  E-value=7.6e-24  Score=143.41  Aligned_cols=137  Identities=23%  Similarity=0.404  Sum_probs=106.6

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccccC-------CcccCCcccCccccccCCCCCCcchhhH
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQR-------GRCYYPAWMSPEALQKKPGDRNLEACDM   77 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~-------~~~~~~~~~~pe~~~~~~~~~~~~~~dv   77 (153)
                      .+-++.|||++++.|+++.+.||+++.++.+++.  |||.+....       ...++..|++||.+.+.   .++.++|+
T Consensus       125 i~~~L~~lH~~gi~H~dl~p~ni~i~~~~~~~l~--d~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~---~~~~~~Dv  199 (286)
T cd06614         125 VLQGLEYLHSQNVIHRDIKSDNILLSKDGSVKLA--DFGFAAQLTKEKSKRNSVVGTPYWMAPEVIKRK---DYGPKVDI  199 (286)
T ss_pred             HHHHHHHHHhCCeeeCCCChhhEEEcCCCCEEEC--ccchhhhhccchhhhccccCCcccCCHhHhcCC---CCCCcccc
Confidence            3456789999999999999999999999988888  999763321       22466789999988754   34578999


Q ss_pred             HHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhcc-ccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581         78 WSFAVLLWELATREVPFADLTPMEVGMKVALEGL-RITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus        78 ~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      |++|+++|++++|..||...........+..... ....+..++..+.+++.+||+.+|.+||++.++++
T Consensus       200 ~slGvil~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~  269 (286)
T cd06614         200 WSLGIMCIEMAEGEPPYLREPPLRALFLITTKGIPPLKNPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQ  269 (286)
T ss_pred             HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCcchhhCCHHHHHHHHHHhccChhhCcCHHHHhh
Confidence            9999999999999999977655444333332222 11223347889999999999999999999999975

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>KOG0032|consensus

Probab=99.90  E-value=8.1e-24  Score=147.28  Aligned_cols=139  Identities=22%  Similarity=0.229  Sum_probs=113.0

Q ss_pred             hhHHhhhhcCCCCCCCeeeeeeeecccc--chhhccccccccccc------CCcccCCcccCccccccCCCCCCcchhhH
Q psy12581          6 IVYSFYLNSKKSKTSNAFLFCCQIDEDL--TARINMADAQFSFQQ------RGRCYYPAWMSPEALQKKPGDRNLEACDM   77 (153)
Q Consensus         6 ~~~~~~lh~~~i~~~ni~~~~~~~~~~~--~~kl~~~d~g~~~~~------~~~~~~~~~~~pe~~~~~~~~~~~~~~dv   77 (153)
                      .-+.+|||+.|+.|+|+++.|+++....  ..++.++|||++...      ...+||+.|+|||.+...   .++...|+
T Consensus       145 l~av~~lH~~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~~~~~~~~~~~Gtp~y~APEvl~~~---~y~~~~Di  221 (382)
T KOG0032|consen  145 LEAVKYLHSLGVVHRDLKPENLLLASKDEGSGRIKLIDFGLAKFIKPGERLHTIVGTPEYVAPEVLGGR---PYGDEVDV  221 (382)
T ss_pred             HHHHHHHHhCCceeccCCHHHeeeccccCCCCcEEEeeCCCceEccCCceEeeecCCccccCchhhcCC---CCCcccch
Confidence            3467899999999999999999986542  234555599999443      345899999999999864   44588999


Q ss_pred             HHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCC--CCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHH
Q psy12581         78 WSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITI--PPGISSHLSKLIRICMNEDPGKRPTFDMVLPI  147 (153)
Q Consensus        78 ~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~  147 (153)
                      ||+|+++|.+++|.+||.+.........+.........  ....+..+.+++.+|+..||.+|+++.++++.
T Consensus       222 WS~Gvi~yiLL~G~~PF~~~~~~~~~~~i~~~~~~f~~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~H  293 (382)
T KOG0032|consen  222 WSIGVILYILLSGVPPFWGETEFEIFLAILRGDFDFTSEPWDDISESAKDFIRKLLEFDPRKRLTAAQALQH  293 (382)
T ss_pred             hHHHHHHHHHhhCCCCCcCCChhHHHHHHHcCCCCCCCCCccccCHHHHHHHHHhcccCcccCCCHHHHhcC
Confidence            99999999999999999998877777777665553332  34578999999999999999999999999863

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=99.90  E-value=1.1e-23  Score=158.21  Aligned_cols=140  Identities=17%  Similarity=0.170  Sum_probs=106.7

Q ss_pred             hHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc-------------------------CCcccCCcccCcc
Q psy12581          7 VYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ-------------------------RGRCYYPAWMSPE   61 (153)
Q Consensus         7 ~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~-------------------------~~~~~~~~~~~pe   61 (153)
                      -++.|||++++.|+||++.||+++.++.+++.  |||++...                         ....||+.|++||
T Consensus       124 ~AL~yLHs~GIIHRDLKPeNILLd~dg~vKLi--DFGLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE  201 (932)
T PRK13184        124 ATIEYVHSKGVLHRDLKPDNILLGLFGEVVIL--DWGAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPE  201 (932)
T ss_pred             HHHHHHHHCCccccCCchheEEEcCCCCEEEE--ecCcceecccccccccccccccccccccccccCCCCCCCCCCCCHH
Confidence            46789999999999999999999999998888  99987432                         0135889999999


Q ss_pred             ccccCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCchhhhHHH-HhhccccCCCCCCCHHHHHHHHHHhcCCCCCCC-
Q psy12581         62 ALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKV-ALEGLRITIPPGISSHLSKLIRICMNEDPGKRP-  139 (153)
Q Consensus        62 ~~~~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-  139 (153)
                      .+.+.   ..+.++|+||+|++++++++|..||............ .............++.+.+++.+|+..||++|+ 
T Consensus       202 ~l~g~---~~S~kSDIWSLGVILyELLTG~~PF~~~~~~ki~~~~~i~~P~~~~p~~~iP~~L~~LI~rcL~~DP~kR~s  278 (932)
T PRK13184        202 RLLGV---PASESTDIYALGVILYQMLTLSFPYRRKKGRKISYRDVILSPIEVAPYREIPPFLSQIAMKALAVDPAERYS  278 (932)
T ss_pred             HhcCC---CCCcHhHHHHHHHHHHHHHHCCCCCCCcchhhhhhhhhccChhhccccccCCHHHHHHHHHHccCChhhCcC
Confidence            98764   3458999999999999999999999765433322211 111111111235778899999999999999997 


Q ss_pred             CHHHHHHHHhhh
Q psy12581        140 TFDMVLPILDKM  151 (153)
Q Consensus       140 s~~~~l~~L~~~  151 (153)
                      +++++.+.|+++
T Consensus       279 s~eeLl~~Le~~  290 (932)
T PRK13184        279 SVQELKQDLEPH  290 (932)
T ss_pred             HHHHHHHHHHHH
Confidence            577777777664

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=99.90  E-value=6.8e-24  Score=141.77  Aligned_cols=137  Identities=20%  Similarity=0.209  Sum_probs=105.1

Q ss_pred             hHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccccC---------------CcccCCcccCccccccCCCCCC
Q psy12581          7 VYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQR---------------GRCYYPAWMSPEALQKKPGDRN   71 (153)
Q Consensus         7 ~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~---------------~~~~~~~~~~pe~~~~~~~~~~   71 (153)
                      -++.|||++++.|+||.++||+++.++.+++.  |||++....               ...++..|++||......   .
T Consensus       104 ~~L~~lH~~~i~H~di~~~nil~~~~~~~~l~--dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~---~  178 (265)
T cd05579         104 LALEYLHSNGIIHRDLKPDNILIDSNGHLKLT--DFGLSKVGLVRRQINLNDDEKEDKRIVGTPDYIAPEVILGQG---H  178 (265)
T ss_pred             HHHHHHHHcCeecCCCCHHHeEEcCCCCEEEE--ecccchhcccCcccccccccccccCcccCccccCHHHhcCCC---C
Confidence            45689999999999999999999999988888  999873221               224667899999887542   4


Q ss_pred             cchhhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHH
Q psy12581         72 LEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPIL  148 (153)
Q Consensus        72 ~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L  148 (153)
                      +.++|+|++|++++++++|..||...................+.....+..+.+++.+||+.+|++|||+..+.+.|
T Consensus       179 ~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l  255 (265)
T cd05579         179 SKTVDWWSLGCILYEFLVGIPPFHGETPEEIFQNILNGKIEWPEDVEVSDEAIDLISKLLVPDPEKRLGAKSIEEIK  255 (265)
T ss_pred             CcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCcCCCccccCCHHHHHHHHHHhcCCHhhcCCCccHHHHh
Confidence            57899999999999999999999877665554444332222222222488999999999999999999995444444

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=99.90  E-value=9.2e-24  Score=143.46  Aligned_cols=139  Identities=19%  Similarity=0.129  Sum_probs=105.2

Q ss_pred             chhhHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccccC-------CcccCCcccCccccccCCCCCCcchhh
Q psy12581          4 KKIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQR-------GRCYYPAWMSPEALQKKPGDRNLEACD   76 (153)
Q Consensus         4 ~~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~-------~~~~~~~~~~pe~~~~~~~~~~~~~~d   76 (153)
                      ...-++.|||+.++.|+||.+.||+++.++.+++.  |||.+....       ...+++.|++||.+.+..  ..+.++|
T Consensus       114 qi~~aL~~LH~~~i~H~dl~p~nili~~~~~~~l~--d~g~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~--~~~~~~D  189 (293)
T cd07843         114 QLLSGVAHLHDNWILHRDLKTSNLLLNNRGILKIC--DFGLAREYGSPLKPYTQLVVTLWYRAPELLLGAK--EYSTAID  189 (293)
T ss_pred             HHHHHHHHHHHCCeeeccCCHHHEEECCCCcEEEe--ecCceeeccCCccccccccccccccCchhhcCCc--cccchhh
Confidence            34557899999999999999999999999999888  999874332       234577899999886532  2457899


Q ss_pred             HHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhc-----------------------------cccCCCCC-CCHHHHHH
Q psy12581         77 MWSFAVLLWELATREVPFADLTPMEVGMKVALEG-----------------------------LRITIPPG-ISSHLSKL  126 (153)
Q Consensus        77 v~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~-----------------------------~~~~~~~~-~~~~~~~l  126 (153)
                      +||+|++++++++|..||..........++....                             .....+.. ++..+.++
T Consensus       190 i~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  269 (293)
T cd07843         190 MWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSELPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDL  269 (293)
T ss_pred             HHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhccchhcccccccccchhhhccccccCCChHHHHH
Confidence            9999999999999999998765444332221100                             00112222 57789999


Q ss_pred             HHHHhcCCCCCCCCHHHHHH
Q psy12581        127 IRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus       127 ~~~cl~~~p~~Rps~~~~l~  146 (153)
                      +.+||+.+|++|||+.++++
T Consensus       270 i~~~l~~~p~~R~t~~ell~  289 (293)
T cd07843         270 LNRLLTYDPAKRISAEDALK  289 (293)
T ss_pred             HHHHhccCccccCCHHHHhc
Confidence            99999999999999999875

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>KOG0658|consensus

Probab=99.90  E-value=8.3e-24  Score=141.85  Aligned_cols=137  Identities=15%  Similarity=0.058  Sum_probs=108.8

Q ss_pred             hhHHhhhhcCCCCCCCeeeeeeeeccc-cchhhcccccccccccCC------cccCCcccCccccccCCCCCCcchhhHH
Q psy12581          6 IVYSFYLNSKKSKTSNAFLFCCQIDED-LTARINMADAQFSFQQRG------RCYYPAWMSPEALQKKPGDRNLEACDMW   78 (153)
Q Consensus         6 ~~~~~~lh~~~i~~~ni~~~~~~~~~~-~~~kl~~~d~g~~~~~~~------~~~~~~~~~pe~~~~~~~~~~~~~~dv~   78 (153)
                      +-++.|||+.+|.|+||++.|+++|.+ |.+|++  |||.|.....      -..+..|.|||.+.+.+  .++.+.|+|
T Consensus       135 frgl~yLh~~~IcHRDIKPqNlLvD~~tg~LKic--DFGSAK~L~~~epniSYicSRyYRaPELifga~--~Yt~~IDiW  210 (364)
T KOG0658|consen  135 FRGLAYLHSHGICHRDIKPQNLLVDPDTGVLKIC--DFGSAKVLVKGEPNISYICSRYYRAPELIFGAT--EYTTSIDIW  210 (364)
T ss_pred             HHHHHHHHhcCcccCCCChheEEEcCCCCeEEec--cCCcceeeccCCCceeEEEeccccCHHHHcCcc--ccCceeEEh
Confidence            456889999999999999999999977 899999  9999954321      14567899999998863  567899999


Q ss_pred             HHHHHHHHHHhCCCCCCCCCchhhhHHHHhhcccc---------------C------------CCCCCCHHHHHHHHHHh
Q psy12581         79 SFAVLLWELATREVPFADLTPMEVGMKVALEGLRI---------------T------------IPPGISSHLSKLIRICM  131 (153)
Q Consensus        79 s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~---------------~------------~~~~~~~~~~~l~~~cl  131 (153)
                      |.||++.|++.|++-|.+.+...++..+..--..+               .            .....+++..+++.++|
T Consensus       211 SaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I~~mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L  290 (364)
T KOG0658|consen  211 SAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDIKSMNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLL  290 (364)
T ss_pred             hhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHHhhcCcccccccCcccccccceeecccCCCHHHHHHHHHHh
Confidence            99999999999999999877666655443210000               0            12346789999999999


Q ss_pred             cCCCCCCCCHHHHHH
Q psy12581        132 NEDPGKRPTFDMVLP  146 (153)
Q Consensus       132 ~~~p~~Rps~~~~l~  146 (153)
                      +.+|++|.++.+++.
T Consensus       291 ~Y~P~~R~~~~~~l~  305 (364)
T KOG0658|consen  291 QYSPSKRLSALEALA  305 (364)
T ss_pred             ccChhhcCCHHHHhc
Confidence            999999999998873

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=99.90  E-value=8.6e-24  Score=145.74  Aligned_cols=139  Identities=18%  Similarity=0.266  Sum_probs=99.6

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc--------------CCcccCCcccCccccccCCCCC
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ--------------RGRCYYPAWMSPEALQKKPGDR   70 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~--------------~~~~~~~~~~~pe~~~~~~~~~   70 (153)
                      ..-++.|||++++.|+||++.||+++.++.+++.  ||+.....              ....++..|++||.+.+.. ..
T Consensus       110 i~~~L~~LH~~~iiH~dlkp~Nil~~~~~~~~l~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~  186 (327)
T cd08227         110 VLKALDYIHHMGYVHRSVKASHILISVDGKVYLS--GLRSNLSMINHGQRLRVVHDFPKYSVKVLPWLSPEVLQQNL-QG  186 (327)
T ss_pred             HHHHHHHHHHCCEecCCCChhhEEEecCCcEEEc--ccchhhccccccccccccccccccccceecccChHHhhccc-CC
Confidence            4557899999999999999999999999888776  87653211              1123456799999986421 13


Q ss_pred             CcchhhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccc--------------------------------------
Q psy12581         71 NLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLR--------------------------------------  112 (153)
Q Consensus        71 ~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~--------------------------------------  112 (153)
                      ++.++|+||+|++++++++|..||..................                                      
T Consensus       187 ~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (327)
T cd08227         187 YDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTTTIPAEELTMKPSRSGANSGLGESTTVSTPRPS  266 (327)
T ss_pred             CCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHHHHhcCCccccccccchhhhhcccCCcccCCcCCCCcccccCCcCcc
Confidence            558899999999999999999999754332221111100000                                      


Q ss_pred             ------cCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581        113 ------ITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus       113 ------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                            .+.....++.+.+++.+||+.||++|||++++++
T Consensus       267 ~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~  306 (327)
T cd08227         267 NGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLN  306 (327)
T ss_pred             ccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhc
Confidence                  0011234568999999999999999999999985

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=99.90  E-value=2.2e-24  Score=149.03  Aligned_cols=141  Identities=18%  Similarity=0.202  Sum_probs=108.0

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc--------CCcccCCcccCccccccCC--CCCCcch
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ--------RGRCYYPAWMSPEALQKKP--GDRNLEA   74 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~--------~~~~~~~~~~~pe~~~~~~--~~~~~~~   74 (153)
                      ...++.|||++++.|+||++.||+++.++.+|+.  |||++...        ....|++.|++||.+....  ...++.+
T Consensus       111 i~~al~~lH~~~iiHrDlkp~Nili~~~~~~kL~--DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~  188 (332)
T cd05623         111 MVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLA--DFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEDGKGKYGPE  188 (332)
T ss_pred             HHHHHHHHHHCCeEecCCCHHHEEECCCCCEEEe--ecchheecccCCcceecccccCccccCHHHHhccccCCCCCCCc
Confidence            3457899999999999999999999999988888  99987432        1246899999999986321  1235678


Q ss_pred             hhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCC---CCCCHHHHHHHHHHhcCCCCC--CCCHHHHHHH
Q psy12581         75 CDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIP---PGISSHLSKLIRICMNEDPGK--RPTFDMVLPI  147 (153)
Q Consensus        75 ~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~cl~~~p~~--Rps~~~~l~~  147 (153)
                      +|+||+|+++|++++|+.||...........+.........|   ...+..+.+++.+|+..+++.  |++++++++.
T Consensus       189 ~DvwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h  266 (332)
T cd05623         189 CDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPAQVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQH  266 (332)
T ss_pred             CCEEeeHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCccccCCCccccCCHHHHHHHHHHccChhhhcCCCCHHHHhCC
Confidence            999999999999999999998877666655554433333333   357899999999998765544  5788888754

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>PHA03209 serine/threonine kinase US3; Provisional

Probab=99.90  E-value=8.3e-24  Score=147.42  Aligned_cols=138  Identities=16%  Similarity=0.161  Sum_probs=98.3

Q ss_pred             chhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc------CCcccCCcccCccccccCCCCCCcchhhH
Q psy12581          4 KKIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ------RGRCYYPAWMSPEALQKKPGDRNLEACDM   77 (153)
Q Consensus         4 ~~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~------~~~~~~~~~~~pe~~~~~~~~~~~~~~dv   77 (153)
                      ...-++.|||+++|.|+||++.||+++.++.+++.  |||.+...      ....|+..|++||.+.+.   .++.++|+
T Consensus       165 qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~kl~--DfG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~Di  239 (357)
T PHA03209        165 QILEGLRYLHAQRIIHRDVKTENIFINDVDQVCIG--DLGAAQFPVVAPAFLGLAGTVETNAPEVLARD---KYNSKADI  239 (357)
T ss_pred             HHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEe--cCccccccccCcccccccccccccCCeecCCC---CCCchhhH
Confidence            34567899999999999999999999999998888  99988432      234678899999998764   34588999


Q ss_pred             HHHHHHHHHHHhCCCCC-CCCCch---------hhhHHHHhh-cc-ccCCC-----------------------------
Q psy12581         78 WSFAVLLWELATREVPF-ADLTPM---------EVGMKVALE-GL-RITIP-----------------------------  116 (153)
Q Consensus        78 ~s~g~~~~~~~~g~~p~-~~~~~~---------~~~~~~~~~-~~-~~~~~-----------------------------  116 (153)
                      ||+|+++|+++++..++ ......         .....+... +. ....+                             
T Consensus       240 wSlGvvl~ell~~~~~~f~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  319 (357)
T PHA03209        240 WSAGIVLFEMLAYPSTIFEDPPSTPEEYVKSCHSHLLKIISTLKVHPEEFPRDPGSRLVRGFIEYASLERQPYTRYPCFQ  319 (357)
T ss_pred             HHHHHHHHHHHHcCCccccCCCCcHHHHHHHHHHHHHHHHHHhccChhhcCCCCccHHHHHHHhhcccCCCcccccHHHh
Confidence            99999999999854443 321111         000011100 00 00000                             


Q ss_pred             -CCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581        117 -PGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus       117 -~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                       ...+....+++.+||+.||++|||+.++++
T Consensus       320 ~~~~~~~~~~li~~mL~~dP~~Rpta~e~l~  350 (357)
T PHA03209        320 RVNLPIDGEFLVHKMLTFDAAMRPSAEEILN  350 (357)
T ss_pred             ccCCCchHHHHHHHHHcCCcccCcCHHHHhc
Confidence             123456778999999999999999999985

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=99.90  E-value=1.8e-23  Score=139.86  Aligned_cols=137  Identities=23%  Similarity=0.291  Sum_probs=107.5

Q ss_pred             hhhHHhhhhc-CCCCCCCeeeeeeeeccccchhhcccccccccccC-------CcccCCcccCccccccCCCCCCcchhh
Q psy12581          5 KIVYSFYLNS-KKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQR-------GRCYYPAWMSPEALQKKPGDRNLEACD   76 (153)
Q Consensus         5 ~~~~~~~lh~-~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~-------~~~~~~~~~~pe~~~~~~~~~~~~~~d   76 (153)
                      .+-+..|||+ .++.|+|+.+.||+++.++.+++.  |||.+....       ...++..|++||.+...   ..+.++|
T Consensus       108 l~~~l~~lh~~~~~~H~~l~~~ni~~~~~~~~~l~--df~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~---~~~~~~D  182 (264)
T cd06623         108 ILKGLDYLHTKRHIIHRDIKPSNLLINSKGEVKIA--DFGISKVLENTLDQCNTFVGTVTYMSPERIQGE---SYSYAAD  182 (264)
T ss_pred             HHHHHHHHhccCCCccCCCCHHHEEECCCCCEEEc--cCccceecccCCCcccceeecccccCHhhhCCC---CCCchhh
Confidence            3456789999 999999999999999999988888  999874321       23466789999998764   4457899


Q ss_pred             HHHHHHHHHHHHhCCCCCCCCC--chhhhHHHHhhccccCCCCC-CCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581         77 MWSFAVLLWELATREVPFADLT--PMEVGMKVALEGLRITIPPG-ISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus        77 v~s~g~~~~~~~~g~~p~~~~~--~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      +|++|+++|++++|..||....  .................+.. .+..+.+++.+||..+|+.||++.++++
T Consensus       183 v~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~  255 (264)
T cd06623         183 IWSLGLTLLECALGKFPFLPPGQPSFFELMQAICDGPPPSLPAEEFSPEFRDFISACLQKDPKKRPSAAELLQ  255 (264)
T ss_pred             HHHHHHHHHHHHhCCCCCccccccCHHHHHHHHhcCCCCCCCcccCCHHHHHHHHHHccCChhhCCCHHHHHh
Confidence            9999999999999999997764  22222222223333444555 7889999999999999999999999985

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=99.90  E-value=1.6e-23  Score=141.40  Aligned_cols=137  Identities=18%  Similarity=0.191  Sum_probs=106.3

Q ss_pred             hhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc-----CCcccCCcccCccccccCCCCCCcchhhHHHH
Q psy12581          6 IVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ-----RGRCYYPAWMSPEALQKKPGDRNLEACDMWSF   80 (153)
Q Consensus         6 ~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~-----~~~~~~~~~~~pe~~~~~~~~~~~~~~dv~s~   80 (153)
                      .-++.|||++++.|+||.+.||+++.++.+++.  |||++...     ....++..|++||.+.+.  ..++.++|+||+
T Consensus       107 ~~~l~~lH~~~i~H~di~p~nili~~~~~~kl~--dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~~Di~s~  182 (278)
T cd05606         107 ILGLEHMHNRFVVYRDLKPANILLDEHGHVRIS--DLGLACDFSKKKPHASVGTHGYMAPEVLQKG--VAYDSSADWFSL  182 (278)
T ss_pred             HHHHHHHHHCCEEcCCCCHHHEEECCCCCEEEc--cCcCccccCccCCcCcCCCcCCcCcHHhcCC--CCCCcccchHhH
Confidence            446789999999999999999999999988888  99987432     234678899999998642  134578999999


Q ss_pred             HHHHHHHHhCCCCCCCCCchhhhH-HHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCC-----CHHHHHH
Q psy12581         81 AVLLWELATREVPFADLTPMEVGM-KVALEGLRITIPPGISSHLSKLIRICMNEDPGKRP-----TFDMVLP  146 (153)
Q Consensus        81 g~~~~~~~~g~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----s~~~~l~  146 (153)
                      |++++++++|..||.+........ ...........+...+..+.+++.+|+..+|++|+     ++.++++
T Consensus       183 G~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~  254 (278)
T cd05606         183 GCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE  254 (278)
T ss_pred             HHHHHHHHhCCCCCCCCCccchHHHHHHhhccCCCCCCcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHh
Confidence            999999999999997653221111 11112224455666789999999999999999999     8888874

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=99.90  E-value=1.3e-23  Score=142.67  Aligned_cols=134  Identities=23%  Similarity=0.305  Sum_probs=107.5

Q ss_pred             hhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc----CCcccCCcccCccccccCCCCCCcchhhHHHHH
Q psy12581          6 IVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ----RGRCYYPAWMSPEALQKKPGDRNLEACDMWSFA   81 (153)
Q Consensus         6 ~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~----~~~~~~~~~~~pe~~~~~~~~~~~~~~dv~s~g   81 (153)
                      .-++.|||++++.|+||.+.||+++.++.+++.  |||++...    ....+++.|++||.+.+.   ..+.++|+||+|
T Consensus       111 l~~l~~lH~~~i~H~dl~p~nili~~~~~~kl~--dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~slG  185 (290)
T cd05580         111 VLALEYLHSLDIVYRDLKPENLLLDSDGYIKIT--DFGFAKRVKGRTYTLCGTPEYLAPEIILSK---GYGKAVDWWALG  185 (290)
T ss_pred             HHHHHHHHHCCEecCCCCHHHEEECCCCCEEEe--eCCCccccCCCCCCCCCCccccChhhhcCC---CCCccccHHHHH
Confidence            346789999999999999999999999988888  99987443    233577889999988654   344789999999


Q ss_pred             HHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCC-----CHHHHHH
Q psy12581         82 VLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRP-----TFDMVLP  146 (153)
Q Consensus        82 ~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----s~~~~l~  146 (153)
                      ++++++++|..||...........+..  .....|...+..+.+++.+||..+|++|+     +++++++
T Consensus       186 ~il~~l~~g~~p~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~  253 (290)
T cd05580         186 ILIYEMLAGYPPFFDDNPIQIYEKILE--GKVRFPSFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKN  253 (290)
T ss_pred             HHHHHHHhCCCCCCCCCHHHHHHHHhc--CCccCCccCCHHHHHHHHHHccCCHHHccCcccCCHHHHHc
Confidence            999999999999977664444443332  23455677899999999999999999999     6676653

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=99.90  E-value=1e-23  Score=159.24  Aligned_cols=139  Identities=19%  Similarity=0.251  Sum_probs=103.7

Q ss_pred             chhhHHhhhhcC-------CCCCCCeeeeeeeecccc-----------------chhhccccccccccc------CCccc
Q psy12581          4 KKIVYSFYLNSK-------KSKTSNAFLFCCQIDEDL-----------------TARINMADAQFSFQQ------RGRCY   53 (153)
Q Consensus         4 ~~~~~~~~lh~~-------~i~~~ni~~~~~~~~~~~-----------------~~kl~~~d~g~~~~~------~~~~~   53 (153)
                      ....++.|||+.       +|+|+||++.||+++.+.                 .+||.  |||++...      ....+
T Consensus       126 QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~~~~~n~ng~~iVKLs--DFGlAr~l~~~s~~~s~vG  203 (1021)
T PTZ00266        126 QLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKITAQANNLNGRPIAKIG--DFGLSKNIGIESMAHSCVG  203 (1021)
T ss_pred             HHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccccccccccccccCCCCceEEc--cCCccccccccccccccCC
Confidence            345678999984       499999999999996532                 24555  99988433      23468


Q ss_pred             CCcccCccccccCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcC
Q psy12581         54 YPAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNE  133 (153)
Q Consensus        54 ~~~~~~pe~~~~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~  133 (153)
                      ++.|++||.+.+.. ..++.++|+||||+++|++++|..||............+......+ ....+..+.+++..||..
T Consensus       204 Tp~YmAPEvL~ge~-~~~s~KSDVWSLG~ILYELLTGk~PF~~~~~~~qli~~lk~~p~lp-i~~~S~eL~dLI~~~L~~  281 (1021)
T PTZ00266        204 TPYYWSPELLLHET-KSYDDKSDMWALGCIIYELCSGKTPFHKANNFSQLISELKRGPDLP-IKGKSKELNILIKNLLNL  281 (1021)
T ss_pred             CccccCHHHHhccC-CCCCchhHHHHHHHHHHHHHHCCCCCCcCCcHHHHHHHHhcCCCCC-cCCCCHHHHHHHHHHhcC
Confidence            99999999986432 1356789999999999999999999977655444433333322221 234688999999999999


Q ss_pred             CCCCCCCHHHHHH
Q psy12581        134 DPGKRPTFDMVLP  146 (153)
Q Consensus       134 ~p~~Rps~~~~l~  146 (153)
                      +|.+||++.+++.
T Consensus       282 dPeeRPSa~QlL~  294 (1021)
T PTZ00266        282 SAKERPSALQCLG  294 (1021)
T ss_pred             ChhHCcCHHHHhc
Confidence            9999999999983

>KOG0594|consensus

Probab=99.90  E-value=1.2e-23  Score=140.63  Aligned_cols=137  Identities=16%  Similarity=0.132  Sum_probs=109.3

Q ss_pred             hHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc-------CCcccCCcccCccccccCCCCCCcchhhHHH
Q psy12581          7 VYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ-------RGRCYYPAWMSPEALQKKPGDRNLEACDMWS   79 (153)
Q Consensus         7 ~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~-------~~~~~~~~~~~pe~~~~~~~~~~~~~~dv~s   79 (153)
                      .++.|||+++|.|+|+++.|++|+++|.+|+.  |||++...       +...+|.+|.+||++.+..  .++...|+||
T Consensus       131 ~gl~~~H~~~IlHRDLKPQNlLi~~~G~lKla--DFGlAra~~ip~~~yt~evvTlWYRaPEvLlGs~--~Ys~~vDiWs  206 (323)
T KOG0594|consen  131 RGLAFLHSHGILHRDLKPQNLLISSSGVLKLA--DFGLARAFSIPMRTYTPEVVTLWYRAPEVLLGST--SYSTSVDIWS  206 (323)
T ss_pred             HHHHHHHhCCeecccCCcceEEECCCCcEeee--ccchHHHhcCCcccccccEEEeeccCHHHhcCCC--cCCCCcchHh
Confidence            46789999999999999999999999999988  99998432       3456788999999998764  3568899999


Q ss_pred             HHHHHHHHHhCCCCCCCCCchhhhHHHHhhcccc----------------CCC------------CCCCHHHHHHHHHHh
Q psy12581         80 FAVLLWELATREVPFADLTPMEVGMKVALEGLRI----------------TIP------------PGISSHLSKLIRICM  131 (153)
Q Consensus        80 ~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~----------------~~~------------~~~~~~~~~l~~~cl  131 (153)
                      +||++.||++++.-|.+....++...+...-..+                +++            ....+...+++.+||
T Consensus       207 ~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~e~~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L  286 (323)
T KOG0594|consen  207 LGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPNEKDWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLL  286 (323)
T ss_pred             HHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCCccCCCCccccccccccCcCCCCccchHHhccccCccHHHHHHHHh
Confidence            9999999999999998888777666554321111                111            011247889999999


Q ss_pred             cCCCCCCCCHHHHHHH
Q psy12581        132 NEDPGKRPTFDMVLPI  147 (153)
Q Consensus       132 ~~~p~~Rps~~~~l~~  147 (153)
                      +.+|.+|.|++.++..
T Consensus       287 ~y~p~~R~Sa~~al~h  302 (323)
T KOG0594|consen  287 QYDPAKRISAKGALTH  302 (323)
T ss_pred             ccCcccCcCHHHHhcC
Confidence            9999999999998864

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.90  E-value=1.3e-23  Score=140.72  Aligned_cols=136  Identities=23%  Similarity=0.303  Sum_probs=109.4

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccccC----------CcccCCcccCccccccCCCCCCcch
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQR----------GRCYYPAWMSPEALQKKPGDRNLEA   74 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~----------~~~~~~~~~~pe~~~~~~~~~~~~~   74 (153)
                      .+-+..|||++++.|+|+.+.||+++.++.+++.  |||.+....          ...++..|++||.+.+.   ..+.+
T Consensus       115 i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~l~--dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~  189 (264)
T cd06653         115 ILQGVSYLHSNMIVHRDIKGANILRDSAGNVKLG--DFGASKRIQTICMSGTGIKSVTGTPYWMSPEVISGE---GYGRK  189 (264)
T ss_pred             HHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEEC--ccccccccccccccCccccccCCcccccCHhhhcCC---CCCcc
Confidence            3456789999999999999999999999988888  999874321          22467789999998753   34578


Q ss_pred             hhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581         75 CDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus        75 ~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      +|+||+|++++++++|+.||...............+.....|...+..+.+++.+||+. +..||++.+++.
T Consensus       190 ~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~i~~~l~~-~~~r~~~~~~~~  260 (264)
T cd06653         190 ADVWSVACTVVEMLTEKPPWAEYEAMAAIFKIATQPTKPMLPDGVSDACRDFLKQIFVE-EKRRPTAEFLLR  260 (264)
T ss_pred             ccHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHcCCCCCCCCcccCHHHHHHHHHHhcC-cccCccHHHHhc
Confidence            99999999999999999999876655554444434444556778899999999999994 799999998765

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=99.90  E-value=1.3e-23  Score=145.36  Aligned_cols=138  Identities=14%  Similarity=0.138  Sum_probs=102.1

Q ss_pred             hhHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccccC----------CcccCCcccCccccccCCCCCCcchh
Q psy12581          6 IVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQR----------GRCYYPAWMSPEALQKKPGDRNLEAC   75 (153)
Q Consensus         6 ~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~----------~~~~~~~~~~pe~~~~~~~~~~~~~~   75 (153)
                      .-++.|||++++.|+||.+.||+++.++.+++.  |||++....          ...++..|++||.+.+.  ..++.++
T Consensus       116 ~~aL~~LH~~~ivH~dlkp~Nill~~~~~~kl~--dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~~  191 (336)
T cd07849         116 LRGLKYIHSANVLHRDLKPSNLLLNTNCDLKIC--DFGLARIADPEHDHTGFLTEYVATRWYRAPEIMLNS--KGYTKAI  191 (336)
T ss_pred             HHHHHHHHhCCeeccCCCHHHEEECCCCCEEEC--cccceeeccccccccCCcCCcCcCCCccChHHhhCC--CCCCcHH
Confidence            356789999999999999999999999988888  999874321          23567889999987542  2345789


Q ss_pred             hHHHHHHHHHHHHhCCCCCCCCCchhhhHHHHh----------------------hc--cccC-----CCCCCCHHHHHH
Q psy12581         76 DMWSFAVLLWELATREVPFADLTPMEVGMKVAL----------------------EG--LRIT-----IPPGISSHLSKL  126 (153)
Q Consensus        76 dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~----------------------~~--~~~~-----~~~~~~~~~~~l  126 (153)
                      |+||+|++++++++|+.||.+.........+..                      ..  ....     .....+..+.++
T Consensus       192 DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  271 (336)
T cd07849         192 DIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQEDLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDL  271 (336)
T ss_pred             HHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHH
Confidence            999999999999999999976443222111100                      00  0000     012346789999


Q ss_pred             HHHHhcCCCCCCCCHHHHHHH
Q psy12581        127 IRICMNEDPGKRPTFDMVLPI  147 (153)
Q Consensus       127 ~~~cl~~~p~~Rps~~~~l~~  147 (153)
                      +.+||+.+|++|||+.++++.
T Consensus       272 i~~~l~~dP~~Rpt~~e~l~h  292 (336)
T cd07849         272 LDKMLTFNPHKRITVEEALAH  292 (336)
T ss_pred             HHHHcCCChhhCcCHHHHhcC
Confidence            999999999999999999864

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=99.90  E-value=1.4e-23  Score=143.54  Aligned_cols=137  Identities=19%  Similarity=0.154  Sum_probs=104.1

Q ss_pred             hhHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccccCC-------cccCCcccCccccccCCCCCCcchhhHH
Q psy12581          6 IVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQRG-------RCYYPAWMSPEALQKKPGDRNLEACDMW   78 (153)
Q Consensus         6 ~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~~-------~~~~~~~~~pe~~~~~~~~~~~~~~dv~   78 (153)
                      .-++.|||++++.|+||.+.||+++.++.+++.  |||.+.....       ..++..|++||.+.+.  ...+.++|+|
T Consensus       118 ~~~l~~lH~~~i~H~dl~p~nil~~~~~~~kL~--dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~~Dvw  193 (309)
T cd07845         118 LRGLQYLHENFIIHRDLKVSNLLLTDKGCLKIA--DFGLARTYGLPAKPMTPKVVTLWYRAPELLLGC--TTYTTAIDMW  193 (309)
T ss_pred             HHHHHHHHhCCeecCCCCHHHEEECCCCCEEEC--ccceeeecCCccCCCCcccccccccChhhhcCC--CCcCchHHHH
Confidence            456789999999999999999999999988888  9998854321       2345679999988653  2345789999


Q ss_pred             HHHHHHHHHHhCCCCCCCCCchhhhHHHHhhcc-----------------ccCCC-----------CCCCHHHHHHHHHH
Q psy12581         79 SFAVLLWELATREVPFADLTPMEVGMKVALEGL-----------------RITIP-----------PGISSHLSKLIRIC  130 (153)
Q Consensus        79 s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~-----------------~~~~~-----------~~~~~~~~~l~~~c  130 (153)
                      |+|+++|++++|..||.+.........+.....                 ....+           ...++.+.+++.+|
T Consensus       194 slG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~m  273 (309)
T cd07845         194 AVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWPGFSDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFL  273 (309)
T ss_pred             HHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChhhchhhhcccccccccccCCCCCchHHhccccCHHHHHHHHHH
Confidence            999999999999999987665554443322100                 00000           12467889999999


Q ss_pred             hcCCCCCCCCHHHHHH
Q psy12581        131 MNEDPGKRPTFDMVLP  146 (153)
Q Consensus       131 l~~~p~~Rps~~~~l~  146 (153)
                      |+.||++|||+++++.
T Consensus       274 l~~dp~~R~t~~~il~  289 (309)
T cd07845         274 LMYDPKKRATAEEALE  289 (309)
T ss_pred             hcCChhhCcCHHHHhc
Confidence            9999999999999875

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>PHA03211 serine/threonine kinase US3; Provisional

Probab=99.90  E-value=1e-23  Score=150.69  Aligned_cols=138  Identities=12%  Similarity=0.129  Sum_probs=100.0

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc---------CCcccCCcccCccccccCCCCCCcchh
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ---------RGRCYYPAWMSPEALQKKPGDRNLEAC   75 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~---------~~~~~~~~~~~pe~~~~~~~~~~~~~~   75 (153)
                      ..-++.|||+++|.|+||++.||+++.++.++|.  |||++...         ....||..|++||.+.+.   .++.++
T Consensus       269 i~~aL~yLH~~gIvHrDLKP~NILl~~~~~vkL~--DFGla~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~---~~~~~s  343 (461)
T PHA03211        269 LLSAIDYIHGEGIIHRDIKTENVLVNGPEDICLG--DFGAACFARGSWSTPFHYGIAGTVDTNAPEVLAGD---PYTPSV  343 (461)
T ss_pred             HHHHHHHHHHCCEEECcCCHHHEEECCCCCEEEc--ccCCceecccccccccccccCCCcCCcCHHHHcCC---CCCchH
Confidence            4457899999999999999999999999988888  99987432         123589999999998764   355889


Q ss_pred             hHHHHHHHHHHHHhCCCCCCCCCc-------hhhhHHHHhh-ccc-cCC---------------------C---------
Q psy12581         76 DMWSFAVLLWELATREVPFADLTP-------MEVGMKVALE-GLR-ITI---------------------P---------  116 (153)
Q Consensus        76 dv~s~g~~~~~~~~g~~p~~~~~~-------~~~~~~~~~~-~~~-~~~---------------------~---------  116 (153)
                      |+||+|+++||+++|..++.....       ......++.. ... ...                     +         
T Consensus       344 DvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~  423 (461)
T PHA03211        344 DIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFPQHAGSRLVSQYRHRAARNRRPAYTRPAWTR  423 (461)
T ss_pred             HHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccCCCCcchHHHHHHHhhhhcccCCccCCcchhh
Confidence            999999999999987655432110       1111111111 000 000                     0         


Q ss_pred             -CCCCHHHHHHHHHHhcCCCCCCCCHHHHHHH
Q psy12581        117 -PGISSHLSKLIRICMNEDPGKRPTFDMVLPI  147 (153)
Q Consensus       117 -~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~  147 (153)
                       ...+..+.+++.+||+.||.+|||+.++++.
T Consensus       424 ~~~~~~~~~dli~~mL~~DP~~RPsa~elL~h  455 (461)
T PHA03211        424 YYKLDLDVEYLVCRALTFDGARRPSAAELLRL  455 (461)
T ss_pred             hccccchHHHHHHHHcccChhhCcCHHHHhhC
Confidence             1234578899999999999999999999864

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=99.90  E-value=8.8e-24  Score=146.52  Aligned_cols=143  Identities=17%  Similarity=0.136  Sum_probs=106.1

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccccC----CcccCCcccCccccccCCCCCCcchhhHHHH
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQR----GRCYYPAWMSPEALQKKPGDRNLEACDMWSF   80 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~----~~~~~~~~~~pe~~~~~~~~~~~~~~dv~s~   80 (153)
                      ..-++.|||++++.|+||.+.||+++.++.+++.  |||++....    ...++..|++||.+.+.  ...+.++|+||+
T Consensus       126 i~~aL~~LH~~~i~H~dlkp~NIll~~~~~~kL~--dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~~Dv~sl  201 (342)
T cd07879         126 MLCGLKYIHSAGIIHRDLKPGNLAVNEDCELKIL--DFGLARHADAEMTGYVVTRWYRAPEVILNW--MHYNQTVDIWSV  201 (342)
T ss_pred             HHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEe--eCCCCcCCCCCCCCceeeecccChhhhcCc--cccCchHHHHHH
Confidence            4457899999999999999999999999988888  999875432    23557789999998642  234578999999


Q ss_pred             HHHHHHHHhCCCCCCCCCchhhhHHHHhhcc---------------------ccCC--------CCCCCHHHHHHHHHHh
Q psy12581         81 AVLLWELATREVPFADLTPMEVGMKVALEGL---------------------RITI--------PPGISSHLSKLIRICM  131 (153)
Q Consensus        81 g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~---------------------~~~~--------~~~~~~~~~~l~~~cl  131 (153)
                      |++++++++|+.||.+.........+.....                     ....        ....+..+.+++.+||
T Consensus       202 Gvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l  281 (342)
T cd07879         202 GCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGPEFVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKML  281 (342)
T ss_pred             HHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHc
Confidence            9999999999999987654333222211000                     0000        1235677899999999


Q ss_pred             cCCCCCCCCHHHHHH--HHhhh
Q psy12581        132 NEDPGKRPTFDMVLP--ILDKM  151 (153)
Q Consensus       132 ~~~p~~Rps~~~~l~--~L~~~  151 (153)
                      +.||++||++++++.  .++.+
T Consensus       282 ~~dP~~R~~~~e~l~h~~f~~~  303 (342)
T cd07879         282 ELDVDKRLTATEALEHPYFDSF  303 (342)
T ss_pred             CCChhhCcCHHHHhcCcchhhc
Confidence            999999999999984  35443

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=99.90  E-value=2.5e-23  Score=141.43  Aligned_cols=135  Identities=19%  Similarity=0.295  Sum_probs=104.8

Q ss_pred             hhHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccccC-------CcccCCcccCccccccCCCCCCcchhhHH
Q psy12581          6 IVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQR-------GRCYYPAWMSPEALQKKPGDRNLEACDMW   78 (153)
Q Consensus         6 ~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~-------~~~~~~~~~~pe~~~~~~~~~~~~~~dv~   78 (153)
                      .-+..|||++++.|+||.+.||+++.++.+++.  |||++....       ...++..|++||.+.+.   .++.++|+|
T Consensus       126 ~~~l~~lH~~givH~dl~p~Nilv~~~~~~~l~--dfg~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~---~~~~~~Dv~  200 (292)
T cd06657         126 LKALSVLHAQGVIHRDIKSDSILLTHDGRVKLS--DFGFCAQVSKEVPRRKSLVGTPYWMAPELISRL---PYGPEVDIW  200 (292)
T ss_pred             HHHHHHHHHCCeecCCCCHHHEEECCCCCEEEc--ccccceecccccccccccccCccccCHHHhcCC---CCCchhhHH
Confidence            346789999999999999999999999988888  999863321       13567789999988653   345789999


Q ss_pred             HHHHHHHHHHhCCCCCCCCCchhhhHHHHhhcc--ccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581         79 SFAVLLWELATREVPFADLTPMEVGMKVALEGL--RITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus        79 s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      |+|++++++++|..||.+.......... ....  ........+..+.+++.+||..+|.+||+++++++
T Consensus       201 slGvil~el~tg~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~R~~~~~ll~  269 (292)
T cd06657         201 SLGIMVIEMVDGEPPYFNEPPLKAMKMI-RDNLPPKLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLK  269 (292)
T ss_pred             HHHHHHHHHHhCCCCCCCCCHHHHHHHH-HhhCCcccCCcccCCHHHHHHHHHHHhCCcccCcCHHHHhc
Confidence            9999999999999999776544433222 2221  12223456788999999999999999999999875

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>PHA03210 serine/threonine kinase US3; Provisional

Probab=99.90  E-value=1.2e-23  Score=152.21  Aligned_cols=136  Identities=20%  Similarity=0.177  Sum_probs=98.8

Q ss_pred             hhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc--------CCcccCCcccCccccccCCCCCCcchhhH
Q psy12581          6 IVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ--------RGRCYYPAWMSPEALQKKPGDRNLEACDM   77 (153)
Q Consensus         6 ~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~--------~~~~~~~~~~~pe~~~~~~~~~~~~~~dv   77 (153)
                      .-++.|||+++|+|+||++.||+++.++.+||.  |||++...        ....|+..|++||.+.+.   .++.++|+
T Consensus       277 ~~aL~yLH~~gIiHrDLKP~NILl~~~~~vkL~--DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~Di  351 (501)
T PHA03210        277 LCAVEYIHDKKLIHRDIKLENIFLNCDGKIVLG--DFGTAMPFEKEREAFDYGWVGTVATNSPEILAGD---GYCEITDI  351 (501)
T ss_pred             HHHHHHHHhCCeecCCCCHHHEEECCCCCEEEE--eCCCceecCcccccccccccCCcCCCCchhhcCC---CCCcHHHH
Confidence            457899999999999999999999999998888  99998432        123688999999998764   35588999


Q ss_pred             HHHHHHHHHHHhCCC-CCCCCC--chhhhHHHHhhcc--c------------------c-CC---------CCCCCHHHH
Q psy12581         78 WSFAVLLWELATREV-PFADLT--PMEVGMKVALEGL--R------------------I-TI---------PPGISSHLS  124 (153)
Q Consensus        78 ~s~g~~~~~~~~g~~-p~~~~~--~~~~~~~~~~~~~--~------------------~-~~---------~~~~~~~~~  124 (153)
                      ||+|+++|++++|.. |+....  ......++.....  .                  . ..         ....+..+.
T Consensus       352 wSlGvil~ell~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~  431 (501)
T PHA03210        352 WSCGLILLDMLSHDFCPIGDGGGKPGKQLLKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFE  431 (501)
T ss_pred             HHHHHHHHHHHHCCCCCccCCCCCHHHHHHHHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHH
Confidence            999999999999765 443221  1111111111000  0                  0 00         012445677


Q ss_pred             HHHHHHhcCCCCCCCCHHHHHH
Q psy12581        125 KLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus       125 ~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      +++.+||+.||.+|||+.++++
T Consensus       432 ~li~kmL~~DP~~Rpsa~elL~  453 (501)
T PHA03210        432 YPLVKMLTFDWHLRPGAAELLA  453 (501)
T ss_pred             HHHHHHhccCcccCcCHHHHhh
Confidence            8899999999999999999985

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=99.90  E-value=3.8e-23  Score=137.68  Aligned_cols=136  Identities=25%  Similarity=0.312  Sum_probs=108.9

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc-----CCcccCCcccCccccccCCCCCCcchhhHHH
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ-----RGRCYYPAWMSPEALQKKPGDRNLEACDMWS   79 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~-----~~~~~~~~~~~pe~~~~~~~~~~~~~~dv~s   79 (153)
                      ..-++.|||.+++.|++|.+.||+++.++.+++.  |||.+...     ....++..|++||...+.   .++.++|+|+
T Consensus       112 l~~al~~lh~~~i~h~~l~~~ni~~~~~~~~kl~--d~g~~~~~~~~~~~~~~~~~~~~~Pe~~~~~---~~~~~~D~~s  186 (256)
T cd08530         112 LLRGLQALHEQKILHRDLKSANILLVANDLVKIG--DLGISKVLKKNMAKTQIGTPHYMAPEVWKGR---PYSYKSDIWS  186 (256)
T ss_pred             HHHHHHHHhhCCcccCCCCcceEEEecCCcEEEe--eccchhhhccCCcccccCCccccCHHHHCCC---CCCchhhHHH
Confidence            3446789999999999999999999999888888  99987432     223567899999998754   3457899999


Q ss_pred             HHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581         80 FAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus        80 ~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      +|++++++++|+.||............ ......+.+...+.++.+++.+||..+|++||++.++++
T Consensus       187 lG~~~~~l~~g~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~  252 (256)
T cd08530         187 LGCLLYEMATFAPPFEARSMQDLRYKV-QRGKYPPIPPIYSQDLQNFIRSMLQVKPKLRPNCDKILA  252 (256)
T ss_pred             HHHHHHHHHhCCCCCCCCCHHHHHHHH-hcCCCCCCchhhCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence            999999999999999877654443333 233334455668889999999999999999999999875

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=99.90  E-value=1.4e-23  Score=142.56  Aligned_cols=137  Identities=14%  Similarity=0.104  Sum_probs=103.0

Q ss_pred             hhHHhhhhcCCCCCCCeeeeeeeecc-ccchhhcccccccccccC-------CcccCCcccCccccccCCCCCCcchhhH
Q psy12581          6 IVYSFYLNSKKSKTSNAFLFCCQIDE-DLTARINMADAQFSFQQR-------GRCYYPAWMSPEALQKKPGDRNLEACDM   77 (153)
Q Consensus         6 ~~~~~~lh~~~i~~~ni~~~~~~~~~-~~~~kl~~~d~g~~~~~~-------~~~~~~~~~~pe~~~~~~~~~~~~~~dv   77 (153)
                      +-++.|||++++.|+||.+.||+++. ++.+++.  |||.+....       ...+++.|++||.+.+.  ...+.++|+
T Consensus       120 ~~~L~~LH~~~i~H~dl~~~nil~~~~~~~~kl~--dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~--~~~~~~~Di  195 (295)
T cd07837         120 LKGVAHCHKHGVMHRDLKPQNLLVDKQKGLLKIA--DLGLGRAFSIPVKSYTHEIVTLWYRAPEVLLGS--THYSTPVDI  195 (295)
T ss_pred             HHHHHHHHHCCeeecCCChHHEEEecCCCeEEEe--ecccceecCCCccccCCcccccCCCChHHhhCC--CCCCchHHH
Confidence            44679999999999999999999998 7888888  999874321       22456789999987642  234578999


Q ss_pred             HHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccc------------------cC--------CCCCCCHHHHHHHHHHh
Q psy12581         78 WSFAVLLWELATREVPFADLTPMEVGMKVALEGLR------------------IT--------IPPGISSHLSKLIRICM  131 (153)
Q Consensus        78 ~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~------------------~~--------~~~~~~~~~~~l~~~cl  131 (153)
                      |++|+++|++++|..||.+.........+......                  ..        .....+..+.+++.+||
T Consensus       196 ~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l  275 (295)
T cd07837         196 WSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGTPTEQVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKML  275 (295)
T ss_pred             HHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhCCCChhhCcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHc
Confidence            99999999999999999876554443332211000                  00        01246788999999999


Q ss_pred             cCCCCCCCCHHHHHH
Q psy12581        132 NEDPGKRPTFDMVLP  146 (153)
Q Consensus       132 ~~~p~~Rps~~~~l~  146 (153)
                      ..+|++||++.+++.
T Consensus       276 ~~~P~~R~~~~eil~  290 (295)
T cd07837         276 RYDPAKRISAKAALT  290 (295)
T ss_pred             cCChhhcCCHHHHhc
Confidence            999999999998874

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=99.90  E-value=3.1e-24  Score=143.18  Aligned_cols=137  Identities=26%  Similarity=0.343  Sum_probs=104.0

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc-------CCcccCCcccCccccc-cCCCCCCcchhh
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ-------RGRCYYPAWMSPEALQ-KKPGDRNLEACD   76 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~-------~~~~~~~~~~~pe~~~-~~~~~~~~~~~d   76 (153)
                      ..-++.+||++++.|+||.+.||+++.++.+++.  |||.+...       ....++..|++||... +.   ..+.++|
T Consensus       107 i~~~L~~Lh~~~i~H~dikp~NIl~~~~~~~~l~--Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~---~~~~~~D  181 (260)
T PF00069_consen  107 ILEALAYLHSKGIVHRDIKPENILLDENGEVKLI--DFGSSVKLSENNENFNPFVGTPEYMAPEVLQQGK---KYTRKSD  181 (260)
T ss_dssp             HHHHHHHHHHTTEEESSBSGGGEEESTTSEEEES--SGTTTEESTSTTSEBSSSSSSGGGSCHHHHTTTS---SBSTHHH
T ss_pred             cccccccccccccccccccccccccccccccccc--cccccccccccccccccccccccccccccccccc---ccccccc
Confidence            4557899999999999999999999999988888  99998531       2346788999999987 32   4458999


Q ss_pred             HHHHHHHHHHHHhCCCCCCCCCchhhhH---HHHhhccccCC--CCCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581         77 MWSFAVLLWELATREVPFADLTPMEVGM---KVALEGLRITI--PPGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus        77 v~s~g~~~~~~~~g~~p~~~~~~~~~~~---~~~~~~~~~~~--~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      +||+|++++++++|..||..........   ...........  ....+..+.+++.+||+.+|++||++.++++
T Consensus       182 i~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~  256 (260)
T PF00069_consen  182 IWSLGIILYELLTGKLPFEESNSDDQLEIIEKILKRPLPSSSQQSREKSEELRDLIKKMLSKDPEQRPSAEELLK  256 (260)
T ss_dssp             HHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHHHHTHHHHHTTSHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHT
T ss_pred             ccccccccccccccccccccccchhhhhhhhhcccccccccccccchhHHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            9999999999999999998763222221   11111111111  1122479999999999999999999999875

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=99.90  E-value=2.2e-23  Score=138.18  Aligned_cols=135  Identities=24%  Similarity=0.364  Sum_probs=105.2

Q ss_pred             hhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc------CCcccCCcccCccccccCCCCCCcchhhHHH
Q psy12581          6 IVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ------RGRCYYPAWMSPEALQKKPGDRNLEACDMWS   79 (153)
Q Consensus         6 ~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~------~~~~~~~~~~~pe~~~~~~~~~~~~~~dv~s   79 (153)
                      .-++.|||++++.|++|.+.||+++.++.+++.  |||.+...      ....++..|++||.+...   ..+.++|+|+
T Consensus       108 ~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~--d~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~---~~~~~~Dv~s  182 (253)
T cd05122         108 LKGLEYLHSNGIIHRDIKAANILLTSDGEVKLI--DFGLSAQLSDTKARNTMVGTPYWMAPEVINGK---PYDYKADIWS  182 (253)
T ss_pred             HHHHHHhhcCCEecCCCCHHHEEEccCCeEEEe--eccccccccccccccceecCCcccCHHHHcCC---CCCccccHHH
Confidence            446889999999999999999999999988888  99987433      233567889999998754   3457899999


Q ss_pred             HHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCCC--CCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581         80 FAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPP--GISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus        80 ~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      +|++++++++|..||.............. ......+.  ..+..+.+++.+||+.+|++|||+.++++
T Consensus       183 lG~il~~l~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~  250 (253)
T cd05122         183 LGITAIELAEGKPPYSELPPMKALFKIAT-NGPPGLRNPEKWSDEFKDFLKKCLQKNPEKRPTAEQLLK  250 (253)
T ss_pred             HHHHHHHHHhCCCCCCCCchHHHHHHHHh-cCCCCcCcccccCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence            99999999999999977644433332222 21222222  23789999999999999999999999875

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=99.90  E-value=2e-23  Score=141.21  Aligned_cols=138  Identities=18%  Similarity=0.224  Sum_probs=102.8

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccccC-------CcccCCcccCccccccCCCCCCcchhhH
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQR-------GRCYYPAWMSPEALQKKPGDRNLEACDM   77 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~-------~~~~~~~~~~pe~~~~~~~~~~~~~~dv   77 (153)
                      ..-++.|||++++.|+|+.++||+++.++.+++.  |||++....       ...++..|++||.+.+.  ...+.++|+
T Consensus       109 i~~~l~~LH~~~i~h~~l~p~ni~~~~~~~~~l~--dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~~Dv  184 (286)
T cd07846         109 ILRGIEFCHSHNIIHRDIKPENILVSQSGVVKLC--DFGFARTLAAPGEVYTDYVATRWYRAPELLVGD--TKYGRAVDI  184 (286)
T ss_pred             HHHHHHHHHHCCccccCCCHHHEEECCCCcEEEE--eeeeeeeccCCccccCcccceeeccCcHHhccc--cccCchHhH
Confidence            4456789999999999999999999999988888  999874321       22466789999987642  234578999


Q ss_pred             HHHHHHHHHHHhCCCCCCCCCchhhhHHHHhh-------------------cccc----------CCCCCCCHHHHHHHH
Q psy12581         78 WSFAVLLWELATREVPFADLTPMEVGMKVALE-------------------GLRI----------TIPPGISSHLSKLIR  128 (153)
Q Consensus        78 ~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~-------------------~~~~----------~~~~~~~~~~~~l~~  128 (153)
                      ||+|++++++++|..||.+.........+...                   ....          ......+..+.+++.
T Consensus       185 ~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  264 (286)
T cd07846         185 WAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNPLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAK  264 (286)
T ss_pred             HHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHhccchHhhccccccccCcchHHHhCCCcCHHHHHHHH
Confidence            99999999999999998765543322221110                   0000          012245778999999


Q ss_pred             HHhcCCCCCCCCHHHHHH
Q psy12581        129 ICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus       129 ~cl~~~p~~Rps~~~~l~  146 (153)
                      +||+.+|++||++.++++
T Consensus       265 ~~l~~~P~~Rp~~~~il~  282 (286)
T cd07846         265 QCLRIDPDDRPSSSQLLH  282 (286)
T ss_pred             HHhcCCcccchhHHHHhc
Confidence            999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=99.90  E-value=2.7e-23  Score=142.39  Aligned_cols=139  Identities=21%  Similarity=0.342  Sum_probs=100.8

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc--------------CCcccCCcccCccccccCCCCC
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ--------------RGRCYYPAWMSPEALQKKPGDR   70 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~--------------~~~~~~~~~~~pe~~~~~~~~~   70 (153)
                      ..-++.|||++++.|+||.+.||+++.++.+++.  |||.+...              ....++..|++||.+.... ..
T Consensus       110 l~~~L~~LH~~~ivH~dlk~~Nili~~~~~~kl~--d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~  186 (314)
T cd08216         110 VLNALDYIHSKGFIHRSVKASHILLSGDGKVVLS--GLRYSVSMIKHGKRQRVVHDFPKSSVKNLPWLSPEVLQQNL-QG  186 (314)
T ss_pred             HHHHHHHHHHCCeecCCCCcceEEEecCCceEEe--cCccceeeccccccccccccccccccccccccCHHHhcCCC-CC
Confidence            3456799999999999999999999999988888  99876322              1124556799999986531 23


Q ss_pred             CcchhhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhcc--------------------------------ccCCCCC
Q psy12581         71 NLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGL--------------------------------RITIPPG  118 (153)
Q Consensus        71 ~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~--------------------------------~~~~~~~  118 (153)
                      ++.++|+||+|++++++++|..||.................                                ....+..
T Consensus       187 ~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  266 (314)
T cd08216         187 YNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVRGTVPCLLDKSTYPLYEDSMSQSRSSNEHPNNRDSVDHPYTRT  266 (314)
T ss_pred             CCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCccccccCchhhhcCCcCcccccccccchhhhhhcchhhH
Confidence            55789999999999999999999976543322211111000                                0001112


Q ss_pred             CCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581        119 ISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus       119 ~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      .+..+.+++.+||+.+|++|||++++++
T Consensus       267 ~~~~~~~li~~~l~~~P~~Rpt~~~ll~  294 (314)
T cd08216         267 FSEHFHQFVELCLQRDPESRPSASQLLN  294 (314)
T ss_pred             HHHHHHHHHHHHhhcCCCcCcCHHHHhc
Confidence            3457889999999999999999999985

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=99.90  E-value=3.2e-23  Score=139.80  Aligned_cols=135  Identities=25%  Similarity=0.354  Sum_probs=107.2

Q ss_pred             hhHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccccC-------CcccCCcccCccccccCCCCCCcchhhHH
Q psy12581          6 IVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQR-------GRCYYPAWMSPEALQKKPGDRNLEACDMW   78 (153)
Q Consensus         6 ~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~-------~~~~~~~~~~pe~~~~~~~~~~~~~~dv~   78 (153)
                      +-+..|||++++.|+||.+.||+++.++.+++.  |||++....       ...++..|++||.+.+.   ..+.++|+|
T Consensus       111 ~~~l~~lh~~~i~h~dl~p~Ni~i~~~~~~~l~--dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~---~~~~~~Dv~  185 (277)
T cd06641         111 LKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLA--DFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQS---AYDSKADIW  185 (277)
T ss_pred             HHHHHHHccCCeecCCCCHHhEEECCCCCEEEe--ecccceecccchhhhccccCCccccChhhhccC---CCCchhhHH
Confidence            345789999999999999999999999988888  999873321       22467789999988653   345789999


Q ss_pred             HHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581         79 SFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus        79 s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      |+|++++++++|..|+........... .........+...+..+.+++.+||+.+|++||++.++++
T Consensus       186 slG~~l~~l~~g~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~  252 (277)
T cd06641         186 SLGITAIELAKGEPPHSELHPMKVLFL-IPKNNPPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLK  252 (277)
T ss_pred             HHHHHHHHHHcCCCCCCccchHHHHHH-HhcCCCCCCCcccCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence            999999999999999977654443332 2233334455667889999999999999999999999987

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=99.90  E-value=1.3e-23  Score=142.89  Aligned_cols=137  Identities=20%  Similarity=0.328  Sum_probs=104.9

Q ss_pred             hhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc-------CCcccCCcccCccccccCCCCCCcchhhHH
Q psy12581          6 IVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ-------RGRCYYPAWMSPEALQKKPGDRNLEACDMW   78 (153)
Q Consensus         6 ~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~-------~~~~~~~~~~~pe~~~~~~~~~~~~~~dv~   78 (153)
                      .-+..|||++++.|+|+.+.||+++.++.+++.  |||.+...       ....+++.|++||.+...   .++.++|+|
T Consensus       125 ~~al~~LH~~gi~H~dL~p~Nili~~~~~~kL~--dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~---~~~~~~Dv~  199 (293)
T cd06647         125 LQALEFLHSNQVIHRDIKSDNILLGMDGSVKLT--DFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRK---AYGPKVDIW  199 (293)
T ss_pred             HHHHHHHHhCCEeeccCCHHHEEEcCCCCEEEc--cCcceecccccccccccccCChhhcCchhhccC---CCCchhhHH
Confidence            346789999999999999999999999988888  99976322       122467789999988653   345789999


Q ss_pred             HHHHHHHHHHhCCCCCCCCCchhhhHHHHhhc-cccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHH
Q psy12581         79 SFAVLLWELATREVPFADLTPMEVGMKVALEG-LRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPI  147 (153)
Q Consensus        79 s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~  147 (153)
                      ++|++++++++|..||...............+ .....+...+..+.+++.+||..+|++||++.+++..
T Consensus       200 slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h  269 (293)
T cd06647         200 SLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQH  269 (293)
T ss_pred             HHHHHHHHHHhCCCCCCCCChhhheeehhcCCCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            99999999999999997655433322221111 1122334567889999999999999999999999753

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=99.90  E-value=4.4e-23  Score=142.61  Aligned_cols=137  Identities=18%  Similarity=0.085  Sum_probs=103.6

Q ss_pred             hhHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccccC---------------------CcccCCcccCccccc
Q psy12581          6 IVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQR---------------------GRCYYPAWMSPEALQ   64 (153)
Q Consensus         6 ~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~---------------------~~~~~~~~~~pe~~~   64 (153)
                      .-++.|||++++.|+||.+.||+++.++.+++.  |||.+....                     ...++..|++||.+.
T Consensus       129 ~~aL~~LH~~~i~H~dl~~~nill~~~~~~kl~--dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  206 (335)
T PTZ00024        129 LNGLNVLHKWYFMHRDLSPANIFINSKGICKIA--DFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLM  206 (335)
T ss_pred             HHHHHHHHhCCeecccccHHHeEECCCCCEEEC--CccceeecccccccccccccccccccccccccccccCCCCChhcc
Confidence            456889999999999999999999999988888  999874322                     123567899999886


Q ss_pred             cCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhcccc--------------------------CCCCC
Q psy12581         65 KKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRI--------------------------TIPPG  118 (153)
Q Consensus        65 ~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~--------------------------~~~~~  118 (153)
                      +..  ..+.++|+||+|++++++++|..||.+.........+......+                          .....
T Consensus       207 ~~~--~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (335)
T PTZ00024        207 GAE--KYHFAVDMWSVGCIFAELLTGKPLFPGENEIDQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPN  284 (335)
T ss_pred             cCC--CCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcC
Confidence            532  24578999999999999999999998766554433322110000                          00123


Q ss_pred             CCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581        119 ISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus       119 ~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      .+..+.+++.+||..+|++||++++++.
T Consensus       285 ~~~~~~~li~~~l~~~P~~R~s~~~~l~  312 (335)
T PTZ00024        285 ASDDAIDLLQSLLKLNPLERISAKEALK  312 (335)
T ss_pred             CChHHHHHHHHHcCCCchhccCHHHHhc
Confidence            4678899999999999999999999975

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=99.89  E-value=2.9e-23  Score=140.50  Aligned_cols=138  Identities=19%  Similarity=0.226  Sum_probs=103.6

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccccC--------CcccCCcccCccccccCCCCCCcchhh
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQR--------GRCYYPAWMSPEALQKKPGDRNLEACD   76 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~--------~~~~~~~~~~pe~~~~~~~~~~~~~~d   76 (153)
                      ..-++.|||+.++.|+|+.+.||+++.++.+++.  |||.+....        ...++..|++||.+....  ..+.++|
T Consensus       109 i~~~l~~LH~~~i~H~dl~~~ni~~~~~~~~kl~--d~g~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~--~~~~~~D  184 (288)
T cd07833         109 LLQAIAYCHSHNIIHRDIKPENILVSESGVLKLC--DFGFARALRARPASPLTDYVATRWYRAPELLVGDT--NYGKPVD  184 (288)
T ss_pred             HHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEE--eeecccccCCCccccccCcccccCCcCCchhcCCC--CcCchhh
Confidence            4557889999999999999999999999999988  999874321        234567899999987541  3457899


Q ss_pred             HHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhh-------------------cccc-----------CCCCCCCHHHHHH
Q psy12581         77 MWSFAVLLWELATREVPFADLTPMEVGMKVALE-------------------GLRI-----------TIPPGISSHLSKL  126 (153)
Q Consensus        77 v~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~-------------------~~~~-----------~~~~~~~~~~~~l  126 (153)
                      +||+|++++++++|..||.+.............                   +...           ..+...+..+.++
T Consensus       185 v~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  264 (288)
T cd07833         185 VWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNPRFAGVAFPEPSQPESLERRYPGKVSSPALDF  264 (288)
T ss_pred             HHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcccCccccccccCCCCCcHHHHHhcCCccchHHHHH
Confidence            999999999999999998765433322211100                   0000           1123347889999


Q ss_pred             HHHHhcCCCCCCCCHHHHHH
Q psy12581        127 IRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus       127 ~~~cl~~~p~~Rps~~~~l~  146 (153)
                      +.+||..+|++||+++++++
T Consensus       265 i~~~l~~~p~~Rps~~~il~  284 (288)
T cd07833         265 LKACLRMDPKERLTCDELLQ  284 (288)
T ss_pred             HHHHhccCchhcccHHHHhc
Confidence            99999999999999998875

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=99.89  E-value=2.5e-23  Score=139.78  Aligned_cols=137  Identities=15%  Similarity=0.155  Sum_probs=104.7

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeecccc-chhhcccccccccccC---CcccCCcccCccccccCCCCCCcchhhHHHH
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDL-TARINMADAQFSFQQR---GRCYYPAWMSPEALQKKPGDRNLEACDMWSF   80 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~-~~kl~~~d~g~~~~~~---~~~~~~~~~~pe~~~~~~~~~~~~~~dv~s~   80 (153)
                      .+-+..|||+.++.|+||.+.||+++.++ .+++.  |||.+....   ...++..|++||.+.+.   .++.++|+||+
T Consensus       118 i~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~l~--dfg~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Dvwsl  192 (267)
T PHA03390        118 LVEALNDLHKHNIIHNDIKLENVLYDRAKDRIYLC--DYGLCKIIGTPSCYDGTLDYFSPEKIKGH---NYDVSFDWWAV  192 (267)
T ss_pred             HHHHHHHHHhCCeeeCCCCHHHEEEeCCCCeEEEe--cCccceecCCCccCCCCCcccChhhhcCC---CCCchhhHHHH
Confidence            34567899999999999999999999888 77777  999874432   23578899999998764   34578999999


Q ss_pred             HHHHHHHHhCCCCCCCCCchhhhHHHH-h-hccccCCCCCCCHHHHHHHHHHhcCCCCCCCC-HHHHHH
Q psy12581         81 AVLLWELATREVPFADLTPMEVGMKVA-L-EGLRITIPPGISSHLSKLIRICMNEDPGKRPT-FDMVLP  146 (153)
Q Consensus        81 g~~~~~~~~g~~p~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps-~~~~l~  146 (153)
                      |++++++++|..||............. . .......+...+..+.+++.+||+.+|.+|++ ++++++
T Consensus       193 G~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~  261 (267)
T PHA03390        193 GVLTYELLTGKHPFKEDEDEELDLESLLKRQQKKLPFIKNVSKNANDFVQSMLKYNINYRLTNYNEIIK  261 (267)
T ss_pred             HHHHHHHHHCCCCCCCCCcchhhHHHHHHhhcccCCcccccCHHHHHHHHHHhccChhhCCchHHHHhc
Confidence            999999999999997543322111111 1 11222344568899999999999999999996 688874

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=99.89  E-value=3.6e-23  Score=140.40  Aligned_cols=138  Identities=12%  Similarity=0.058  Sum_probs=100.5

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc-------CCcccCCcccCccccccCCCCCCcchhhH
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ-------RGRCYYPAWMSPEALQKKPGDRNLEACDM   77 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~-------~~~~~~~~~~~pe~~~~~~~~~~~~~~dv   77 (153)
                      ..-++.|||++++.|+||.+.||+++.++.+++.  |||++...       ....++..|++||.+.+.  ...+.++|+
T Consensus       112 i~~~L~~lH~~~i~H~dlkp~Nil~~~~~~~~l~--Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~~Dv  187 (291)
T cd07870         112 LLRGLAYIHGQHILHRDLKPQNLLISYLGELKLA--DFGLARAKSIPSQTYSSEVVTLWYRPPDVLLGA--TDYSSALDI  187 (291)
T ss_pred             HHHHHHHHHhCCcccCCCChHHEEEcCCCcEEEe--ccccccccCCCCCCCCCccccccccCCceeecC--CCCCcHHHH
Confidence            3456789999999999999999999999988888  99987432       122467889999988642  124578999


Q ss_pred             HHHHHHHHHHHhCCCCCCCCCchhh-hHHHHhh-c---------------c-----ccCCC---------CCCCHHHHHH
Q psy12581         78 WSFAVLLWELATREVPFADLTPMEV-GMKVALE-G---------------L-----RITIP---------PGISSHLSKL  126 (153)
Q Consensus        78 ~s~g~~~~~~~~g~~p~~~~~~~~~-~~~~~~~-~---------------~-----~~~~~---------~~~~~~~~~l  126 (153)
                      ||+|++++++++|..||........ ..+.... +               .     ....+         ...+..+.++
T Consensus       188 ~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  267 (291)
T cd07870         188 WGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVSKLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDL  267 (291)
T ss_pred             HHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhhhhhcccccchhccccCCcchhhhccccCCChHHHHH
Confidence            9999999999999999976543211 1111100 0               0     00000         0125678999


Q ss_pred             HHHHhcCCCCCCCCHHHHHH
Q psy12581        127 IRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus       127 ~~~cl~~~p~~Rps~~~~l~  146 (153)
                      +.+|++.||++|||+.+++.
T Consensus       268 l~~~l~~dp~~R~t~~~~l~  287 (291)
T cd07870         268 ASQMLMMFPKDRISAQDALL  287 (291)
T ss_pred             HHHHhCcCcccCcCHHHHhc
Confidence            99999999999999999874

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=99.89  E-value=5e-23  Score=137.24  Aligned_cols=135  Identities=22%  Similarity=0.308  Sum_probs=105.1

Q ss_pred             hhHHhhhhcCCCCCCCeeeeeeeeccccc-hhhcccccccccccC-------CcccCCcccCccccccCCCCCCcchhhH
Q psy12581          6 IVYSFYLNSKKSKTSNAFLFCCQIDEDLT-ARINMADAQFSFQQR-------GRCYYPAWMSPEALQKKPGDRNLEACDM   77 (153)
Q Consensus         6 ~~~~~~lh~~~i~~~ni~~~~~~~~~~~~-~kl~~~d~g~~~~~~-------~~~~~~~~~~pe~~~~~~~~~~~~~~dv   77 (153)
                      .-+..|||++++.|+|+.+.||+++.++. +++.  |||.+....       ...+++.|++||...+.   ..+.++|+
T Consensus       111 ~~~l~~lh~~~i~H~dl~~~nil~~~~~~~~~l~--d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~---~~~~~~Dv  185 (257)
T cd08225         111 SLGLKHIHDRKILHRDIKSQNIFLSKNGMVAKLG--DFGIARQLNDSMELAYTCVGTPYYLSPEICQNR---PYNNKTDI  185 (257)
T ss_pred             HHHHHHHHHCCcccccCCHHHEEEcCCCCeEEec--ccccchhccCCcccccccCCCccccCHHHHcCC---CCCchhhH
Confidence            45678999999999999999999988754 4777  999874321       12467789999987653   34578999


Q ss_pred             HHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581         78 WSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus        78 ~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      ||+|++++++++|..||.............. ......+...+..+.+++.+||..+|++|||+.++++
T Consensus       186 ~slG~il~~l~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~  253 (257)
T cd08225         186 WSLGCVLYELCTLKHPFEGNNLHQLVLKICQ-GYFAPISPNFSRDLRSLISQLFKVSPRDRPSITSILK  253 (257)
T ss_pred             HHHHHHHHHHHhCCCCCCCccHHHHHHHHhc-ccCCCCCCCCCHHHHHHHHHHhccChhhCcCHHHHhh
Confidence            9999999999999999977655444433332 2233344567889999999999999999999999875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=99.89  E-value=3.1e-23  Score=143.04  Aligned_cols=137  Identities=21%  Similarity=0.169  Sum_probs=104.9

Q ss_pred             hhHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccccC----------CcccCCcccCccccccCCCCCCcchh
Q psy12581          6 IVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQR----------GRCYYPAWMSPEALQKKPGDRNLEAC   75 (153)
Q Consensus         6 ~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~----------~~~~~~~~~~pe~~~~~~~~~~~~~~   75 (153)
                      .-++.|||++++.|+||.+.||+++.++.+++.  |||.+....          ...++..|++||.+.+..  ..+.++
T Consensus       113 ~~~l~~LH~~gi~H~dlkp~nili~~~~~~~L~--dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~--~~~~~s  188 (330)
T cd07834         113 LRGLKYLHSANVIHRDLKPSNILVNSNCDLKIC--DFGLARGVDPDEDEKGFLTEYVVTRWYRAPELLLSSS--RYTKAI  188 (330)
T ss_pred             HHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEc--ccCceEeecccccccccccccccccCcCCceeeeccc--CCCcch
Confidence            446789999999999999999999999988888  999884322          234677899999987642  345789


Q ss_pred             hHHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhcccc-----------------------------CCCCCCCHHHHHH
Q psy12581         76 DMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRI-----------------------------TIPPGISSHLSKL  126 (153)
Q Consensus        76 dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~-----------------------------~~~~~~~~~~~~l  126 (153)
                      |+||+|++++++++|..||.+.........+......+                             ......+..+.++
T Consensus       189 Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  268 (330)
T cd07834         189 DIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDLKFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDL  268 (330)
T ss_pred             hHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChhHhhhccccchhhHHhhcccCCcchhHHhcccCCHHHHHH
Confidence            99999999999999999997765544333222110000                             0112357789999


Q ss_pred             HHHHhcCCCCCCCCHHHHHH
Q psy12581        127 IRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus       127 ~~~cl~~~p~~Rps~~~~l~  146 (153)
                      +.+||+.+|++||+++++++
T Consensus       269 i~~~l~~~P~~Rpt~~~ll~  288 (330)
T cd07834         269 LEKMLVFDPKKRITADEALA  288 (330)
T ss_pred             HHHHccCChhhCCCHHHHHh
Confidence            99999999999999999986

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=99.89  E-value=1.7e-23  Score=144.87  Aligned_cols=139  Identities=17%  Similarity=0.108  Sum_probs=103.7

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccccC-------CcccCCcccCccccccCCCCCCcchhhH
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQR-------GRCYYPAWMSPEALQKKPGDRNLEACDM   77 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~-------~~~~~~~~~~pe~~~~~~~~~~~~~~dv   77 (153)
                      ..-++.|||++++.|+||.+.||+++.++.+|+.  |||++....       ...++..|++||.+...  ...+.++|+
T Consensus       117 i~~aL~~LH~~~i~H~dlkp~Nil~~~~~~~kL~--Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~~Di  192 (337)
T cd07858         117 LLRGLKYIHSANVLHRDLKPSNLLLNANCDLKIC--DFGLARTTSEKGDFMTEYVVTRWYRAPELLLNC--SEYTTAIDV  192 (337)
T ss_pred             HHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEEC--cCccccccCCCcccccccccccCccChHHHhcC--CCCCCcccH
Confidence            3456789999999999999999999999988888  999885432       22567789999987642  135578999


Q ss_pred             HHHHHHHHHHHhCCCCCCCCCchhhhHHHHh-----------------------hccc---c---CCCCCCCHHHHHHHH
Q psy12581         78 WSFAVLLWELATREVPFADLTPMEVGMKVAL-----------------------EGLR---I---TIPPGISSHLSKLIR  128 (153)
Q Consensus        78 ~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~-----------------------~~~~---~---~~~~~~~~~~~~l~~  128 (153)
                      |++|++++++++|..||.+.........+..                       ....   .   ......+..+.+++.
T Consensus       193 wslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  272 (337)
T cd07858         193 WSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGFIRNEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLE  272 (337)
T ss_pred             HHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcCchhhhHHHHhcCcccccCHHHHcccCCHHHHHHHH
Confidence            9999999999999999976543221111100                       0000   0   012346788999999


Q ss_pred             HHhcCCCCCCCCHHHHHHH
Q psy12581        129 ICMNEDPGKRPTFDMVLPI  147 (153)
Q Consensus       129 ~cl~~~p~~Rps~~~~l~~  147 (153)
                      +||+.+|++|||++++++.
T Consensus       273 ~~l~~~P~~Rps~~ell~h  291 (337)
T cd07858         273 KMLVFDPSKRITVEEALAH  291 (337)
T ss_pred             HHhcCChhhccCHHHHHcC
Confidence            9999999999999999864

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=99.89  E-value=2.7e-23  Score=140.64  Aligned_cols=136  Identities=19%  Similarity=0.266  Sum_probs=103.2

Q ss_pred             hhHHhhhhc-CCCCCCCeeeeeeeeccccchhhccccccccccc-----CCcccCCcccCccccccCCCCCCcchhhHHH
Q psy12581          6 IVYSFYLNS-KKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ-----RGRCYYPAWMSPEALQKKPGDRNLEACDMWS   79 (153)
Q Consensus         6 ~~~~~~lh~-~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~-----~~~~~~~~~~~pe~~~~~~~~~~~~~~dv~s   79 (153)
                      .-+..|||+ .++.|+||.+.||+++.++.+++.  |||++...     ....++..|++||.+.+.   ..+.++|+||
T Consensus       113 ~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~--d~gl~~~~~~~~~~~~~~~~~~~aPE~~~~~---~~~~~~Di~s  187 (284)
T cd06620         113 VEGLTYLYNVHRIMHRDIKPSNILVNSRGQIKLC--DFGVSGELINSIADTFVGTSTYMSPERIQGG---KYTVKSDVWS  187 (284)
T ss_pred             HHHHHHHHHhcCeeccCCCHHHEEECCCCcEEEc--cCCcccchhhhccCccccCcccCCHHHHccC---CCCccchHHH
Confidence            445789997 589999999999999999988888  99987432     224678899999988653   4457899999


Q ss_pred             HHHHHHHHHhCCCCCCCCCch-----------hhhHHHHhhccccCCCC-CCCHHHHHHHHHHhcCCCCCCCCHHHHHHH
Q psy12581         80 FAVLLWELATREVPFADLTPM-----------EVGMKVALEGLRITIPP-GISSHLSKLIRICMNEDPGKRPTFDMVLPI  147 (153)
Q Consensus        80 ~g~~~~~~~~g~~p~~~~~~~-----------~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~  147 (153)
                      +|++++++++|..||......           ....... .......+. ..+..+.+++.+||+.||++||++.++++.
T Consensus       188 lG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~  266 (284)
T cd06620         188 LGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIV-QEPPPRLPSSDFPEDLRDFVDACLLKDPTERPTPQQLCAM  266 (284)
T ss_pred             HHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHh-hccCCCCCchhcCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence            999999999999999764432           1111111 111222222 267889999999999999999999999875

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=99.89  E-value=3.9e-23  Score=139.74  Aligned_cols=138  Identities=17%  Similarity=0.110  Sum_probs=103.3

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc--------CCcccCCcccCccccccCCCCCCcchhh
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ--------RGRCYYPAWMSPEALQKKPGDRNLEACD   76 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~--------~~~~~~~~~~~pe~~~~~~~~~~~~~~d   76 (153)
                      ..-++.|||++++.|+||.+.||+++.++.+++.  |||.+...        ....++..|++||.+.+.  ...+.++|
T Consensus       108 i~~~l~~lH~~~i~H~dl~p~ni~~~~~~~~~l~--dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~~D  183 (286)
T cd07832         108 LLKGVAYMHANGIMHRDLKPANLLISADGVLKIA--DFGLARLFSEEEPRLYSHQVATRWYRAPELLYGA--RKYDPGVD  183 (286)
T ss_pred             HHHHHHHHHHCCeecCCcCHHHEEEcCCCcEEEe--eeeecccccCCCCCccccccCcccccCceeeecc--ccCCchhH
Confidence            3456789999999999999999999999988888  99987432        123567889999987643  23457899


Q ss_pred             HHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccc-------------------c---------CCCCCCCHHHHHHHH
Q psy12581         77 MWSFAVLLWELATREVPFADLTPMEVGMKVALEGLR-------------------I---------TIPPGISSHLSKLIR  128 (153)
Q Consensus        77 v~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~-------------------~---------~~~~~~~~~~~~l~~  128 (153)
                      +|++|++++++++|.++|.+.........+...-..                   .         ......+..+.+++.
T Consensus       184 i~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  263 (286)
T cd07832         184 LWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPGLTSLPDYNKITFPESKPIPLEEIFPDASPEALDLLK  263 (286)
T ss_pred             HHHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcCCCChHHHhhccCcchhhcccCCCCCcchHHHhCCCccHHHHHHHH
Confidence            999999999999998888765544333222211000                   0         001234678999999


Q ss_pred             HHhcCCCCCCCCHHHHHH
Q psy12581        129 ICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus       129 ~cl~~~p~~Rps~~~~l~  146 (153)
                      +||..+|++||++++++.
T Consensus       264 ~~l~~~p~~R~~~~~~l~  281 (286)
T cd07832         264 GLLVYDPSKRLSAAEALR  281 (286)
T ss_pred             HHhccChhhCCCHHHHhh
Confidence            999999999999999875

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=99.89  E-value=3.5e-23  Score=137.78  Aligned_cols=137  Identities=26%  Similarity=0.359  Sum_probs=108.1

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc---------CCcccCCcccCccccccCCCCCCcchh
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ---------RGRCYYPAWMSPEALQKKPGDRNLEAC   75 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~---------~~~~~~~~~~~pe~~~~~~~~~~~~~~   75 (153)
                      ..-++.|||++++.|+|+.++||+++.++.+++.  |||.+...         ....++..|++||......   .+.++
T Consensus       110 l~~~l~~lh~~~~~h~dl~p~ni~i~~~~~~~l~--d~~~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~---~~~~~  184 (260)
T cd06606         110 ILEGLAYLHSNGIVHRDIKGANILVDSDGVVKLA--DFGCAKRLGDIETGEGTGSVRGTPYWMAPEVIRGEE---YGRAA  184 (260)
T ss_pred             HHHHHHHHHHCCccccCCCHHHEEEcCCCCEEEc--ccccEEecccccccccccCCCCCccccCHhhhcCCC---CCchh
Confidence            3456789999999999999999999999888888  99987322         2235677899999987642   45789


Q ss_pred             hHHHHHHHHHHHHhCCCCCCCCCchh-hhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581         76 DMWSFAVLLWELATREVPFADLTPME-VGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus        76 dv~s~g~~~~~~~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      |+|++|++++++++|..||....... ..............+...+..+.+++.+|++.+|++||++.++++
T Consensus       185 Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~  256 (260)
T cd06606         185 DIWSLGCTVIEMATGKPPWSELGNPMAALYKIGSSGEPPEIPEHLSEEAKDFLRKCLRRDPKKRPTADELLQ  256 (260)
T ss_pred             hHHHHHHHHHHHHhCCCCCCCCCchHHHHHhccccCCCcCCCcccCHHHHHHHHHhCcCChhhCCCHHHHhh
Confidence            99999999999999999997765222 222222223344556677899999999999999999999999875

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=99.89  E-value=4.8e-23  Score=139.66  Aligned_cols=136  Identities=21%  Similarity=0.236  Sum_probs=102.3

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc-----CCcccCCcccCccccccCCCCCCcchhhHHH
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ-----RGRCYYPAWMSPEALQKKPGDRNLEACDMWS   79 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~-----~~~~~~~~~~~pe~~~~~~~~~~~~~~dv~s   79 (153)
                      .+-++.|||..++.|+|+.+.||+++.++.+++.  |||++...     ....++..|++||.+.+.   .++.++|+|+
T Consensus       114 i~~~L~~lH~~~i~H~dl~~~nil~~~~~~~~l~--dfg~~~~~~~~~~~~~~~~~~y~~pE~~~~~---~~~~~~Dv~s  188 (287)
T cd06621         114 VLKGLSYLHSRKIIHRDIKPSNILLTRKGQVKLC--DFGVSGELVNSLAGTFTGTSFYMAPERIQGK---PYSITSDVWS  188 (287)
T ss_pred             HHHHHHHHHHCCcccCCCCHHHEEEecCCeEEEe--eccccccccccccccccCCccccCHHHhcCC---CCCchhhHHH
Confidence            3456889999999999999999999999988888  99987432     223567789999988754   3457899999


Q ss_pred             HHHHHHHHHhCCCCCCCCCc-----hhhhHHHHhhccccCCC------CCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581         80 FAVLLWELATREVPFADLTP-----MEVGMKVALEGLRITIP------PGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus        80 ~g~~~~~~~~g~~p~~~~~~-----~~~~~~~~~~~~~~~~~------~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      +|+++|++++|..||.....     .+...... ....+..+      ..+++.+.+++.+||..+|++|||+.++++
T Consensus       189 lG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~  265 (287)
T cd06621         189 LGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIV-NMPNPELKDEPGNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLE  265 (287)
T ss_pred             HHHHHHHHHhCCCCCCcccCCCCChHHHHHHHh-cCCchhhccCCCCCCchHHHHHHHHHHHcCCCcccCCCHHHHHh
Confidence            99999999999999976522     11111111 11111111      234578999999999999999999999986

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>KOG1035|consensus

Probab=99.89  E-value=3e-23  Score=156.02  Aligned_cols=132  Identities=20%  Similarity=0.290  Sum_probs=101.9

Q ss_pred             HHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccc-------------------------cCCcccCCcccCccc
Q psy12581          8 YSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQ-------------------------QRGRCYYPAWMSPEA   62 (153)
Q Consensus         8 ~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~-------------------------~~~~~~~~~~~~pe~   62 (153)
                      .+.|+|++|++|+|++|.|||+|++..+||.  |||++..                         .++..||.-|+|||.
T Consensus       709 GLaYIH~~giIHRDLKP~NIFLd~~~~VKIG--DFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEl  786 (1351)
T KOG1035|consen  709 GLAYIHDQGIIHRDLKPRNIFLDSRNSVKIG--DFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPEL  786 (1351)
T ss_pred             HHHHHHhCceeeccCCcceeEEcCCCCeeec--ccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHH
Confidence            4689999999999999999999999999988  9999833                         134478999999999


Q ss_pred             cccCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCC-chhhhHHHHhhccccCCC----CCCCHHHHHHHHHHhcCCCCC
Q psy12581         63 LQKKPGDRNLEACDMWSFAVLLWELATREVPFADLT-PMEVGMKVALEGLRITIP----PGISSHLSKLIRICMNEDPGK  137 (153)
Q Consensus        63 ~~~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~-~~~~~~~~~~~~~~~~~~----~~~~~~~~~l~~~cl~~~p~~  137 (153)
                      +.+.....++.+.|+||+|++++||+   .||.... ....+.. ++.+ ..+.+    ....+.-..+++.|++.||++
T Consensus       787 l~~~~~~~Yn~KiDmYSLGIVlFEM~---yPF~TsMERa~iL~~-LR~g-~iP~~~~f~~~~~~~e~slI~~Ll~hdP~k  861 (1351)
T KOG1035|consen  787 LSDTSSNKYNSKIDMYSLGIVLFEML---YPFGTSMERASILTN-LRKG-SIPEPADFFDPEHPEEASLIRWLLSHDPSK  861 (1351)
T ss_pred             hcccccccccchhhhHHHHHHHHHHh---ccCCchHHHHHHHHh-cccC-CCCCCcccccccchHHHHHHHHHhcCCCcc
Confidence            98765446789999999999999997   4565433 2333322 2222 22222    223456788999999999999


Q ss_pred             CCCHHHHHH
Q psy12581        138 RPTFDMVLP  146 (153)
Q Consensus       138 Rps~~~~l~  146 (153)
                      |||+.++++
T Consensus       862 RPtA~eLL~  870 (1351)
T KOG1035|consen  862 RPTATELLN  870 (1351)
T ss_pred             CCCHHHHhh
Confidence            999999985

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=99.89  E-value=2.7e-23  Score=140.28  Aligned_cols=138  Identities=17%  Similarity=0.130  Sum_probs=104.3

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccccC-------CcccCCcccCccccccCCCCCCcchhhH
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQR-------GRCYYPAWMSPEALQKKPGDRNLEACDM   77 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~-------~~~~~~~~~~pe~~~~~~~~~~~~~~dv   77 (153)
                      ..-++.|||+.++.|+||.++||+++.++.+++.  |||.+....       ...++..|++||.+.+.  ...+.++|+
T Consensus       107 i~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~--df~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~--~~~~~~~Di  182 (283)
T cd05118         107 LLQGLAFCHSHGILHRDLKPENLLINTEGVLKLA--DFGLARSFGSPVRPYTHYVVTRWYRAPELLLGD--KGYSTPVDI  182 (283)
T ss_pred             HHHHHHHHHHCCeeecCcCHHHEEECCCCcEEEe--eeeeeEecCCCcccccCccCcccccCcHHHhcC--CCCCchhHH
Confidence            3456789999999999999999999999988888  999874332       23466789999998753  135688999


Q ss_pred             HHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhcccc----------------------------CCCCCCCHHHHHHHHH
Q psy12581         78 WSFAVLLWELATREVPFADLTPMEVGMKVALEGLRI----------------------------TIPPGISSHLSKLIRI  129 (153)
Q Consensus        78 ~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~----------------------------~~~~~~~~~~~~l~~~  129 (153)
                      |++|++++++++|+.||.+.+..+....+......+                            ......+..+.+++.+
T Consensus       183 ~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  262 (283)
T cd05118         183 WSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLARNYKFSFPKKAGMPLPKLFPNASPQALDLLSQ  262 (283)
T ss_pred             HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcccchhhhhhhhhhhccccccCHHHhhhhhCHHHHHHHHH
Confidence            999999999999999997765544333222110000                            0112356789999999


Q ss_pred             HhcCCCCCCCCHHHHHH
Q psy12581        130 CMNEDPGKRPTFDMVLP  146 (153)
Q Consensus       130 cl~~~p~~Rps~~~~l~  146 (153)
                      ||..+|.+||++++++.
T Consensus       263 ~l~~~P~~Rp~~~~ll~  279 (283)
T cd05118         263 MLHYDPHKRITAEQALA  279 (283)
T ss_pred             HhccCcccCcCHHHHhh
Confidence            99999999999999875

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>KOG0604|consensus

Probab=99.89  E-value=8.9e-24  Score=139.08  Aligned_cols=137  Identities=21%  Similarity=0.344  Sum_probs=105.1

Q ss_pred             hHHhhhhcCCCCCCCeeeeeeeeccc-cchhhccccccccccc------CCcccCCcccCccccccCCCCCCcchhhHHH
Q psy12581          7 VYSFYLNSKKSKTSNAFLFCCQIDED-LTARINMADAQFSFQQ------RGRCYYPAWMSPEALQKKPGDRNLEACDMWS   79 (153)
Q Consensus         7 ~~~~~lh~~~i~~~ni~~~~~~~~~~-~~~kl~~~d~g~~~~~------~~~~~~~~~~~pe~~~~~~~~~~~~~~dv~s   79 (153)
                      .+..|||+.+|-|+|+++.|++.... -.+-++++|||++...      .+.|.||+|.+||++...++   ....|+||
T Consensus       172 ~Av~~lH~~nIAHRDlKpENLLyt~t~~na~lKLtDfGFAK~t~~~~~L~TPc~TPyYvaPevlg~eKy---dkscdmwS  248 (400)
T KOG0604|consen  172 LAVRYLHSMNIAHRDLKPENLLYTTTSPNAPLKLTDFGFAKETQEPGDLMTPCFTPYYVAPEVLGPEKY---DKSCDMWS  248 (400)
T ss_pred             HHHHHHHhcchhhccCChhheeeecCCCCcceEecccccccccCCCccccCCcccccccCHHHhCchhc---CCCCCccc
Confidence            46789999999999998888887543 3344555599999554      34588999999999987654   47899999


Q ss_pred             HHHHHHHHHhCCCCCCCCCchh----hhHHHHhhccccCCCC--CCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581         80 FAVLLWELATREVPFADLTPME----VGMKVALEGLRITIPP--GISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus        80 ~g~~~~~~~~g~~p~~~~~~~~----~~~~~~~~~~~~~~~~--~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      +|+++|-++.|.+||++.....    ...++....+..+.|+  ++|....++++++|..+|++|.|++++++
T Consensus       249 lgVimYIlLCGyPPFYS~hg~aispgMk~rI~~gqy~FP~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~  321 (400)
T KOG0604|consen  249 LGVIMYILLCGYPPFYSNHGLAISPGMKRRIRTGQYEFPEPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMD  321 (400)
T ss_pred             hhHHHHHhhcCCCcccccCCccCChhHHhHhhccCccCCChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhc
Confidence            9999999999999998754322    2233444444444333  47788999999999999999999999875

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=99.89  E-value=1.7e-23  Score=144.51  Aligned_cols=141  Identities=19%  Similarity=0.200  Sum_probs=105.6

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccccC--------CcccCCcccCccccccCC--CCCCcch
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQR--------GRCYYPAWMSPEALQKKP--GDRNLEA   74 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~--------~~~~~~~~~~pe~~~~~~--~~~~~~~   74 (153)
                      ..-++.|||++++.|+||++.||+++.++.+|+.  |||++....        ...|++.|++||.+....  ...++.+
T Consensus       111 i~~~l~~lH~~~ivH~dlkp~Nill~~~~~~kl~--Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~  188 (331)
T cd05597         111 MVLAIDSVHQLGYVHRDIKPDNVLLDKNGHIRLA--DFGSCLRLLADGTVQSNVAVGTPDYISPEILQAMEDGKGRYGPE  188 (331)
T ss_pred             HHHHHHHHHhCCeEECCCCHHHEEECCCCCEEEE--ECCceeecCCCCCccccceeccccccCHHHHhhccccccCCCCc
Confidence            3457889999999999999999999999998888  999874321        135889999999986421  1234578


Q ss_pred             hhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCC---CCCCHHHHHHHHHHhcCCCCC--CCCHHHHHHH
Q psy12581         75 CDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIP---PGISSHLSKLIRICMNEDPGK--RPTFDMVLPI  147 (153)
Q Consensus        75 ~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~cl~~~p~~--Rps~~~~l~~  147 (153)
                      +|+||+|+++|++++|+.||.+....+....+.........+   ...+..+.+++++|+..+++.  |++++++++.
T Consensus       189 ~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~h  266 (331)
T cd05597         189 CDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKEHFQFPPDVTDVSEEAKDLIRRLICSPETRLGRNGLQDFKDH  266 (331)
T ss_pred             ceeehhhhHHHHHhhCCCCCCCCCHHHHHHHHHcCCCcccCCCccCCCCHHHHHHHHHHccCcccccCCCCHHHHhcC
Confidence            999999999999999999998776555544444332222222   346889999999988664443  7788888753

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=99.89  E-value=3.9e-23  Score=137.55  Aligned_cols=135  Identities=26%  Similarity=0.363  Sum_probs=109.0

Q ss_pred             hhHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccccC-------CcccCCcccCccccccCCCCCCcchhhHH
Q psy12581          6 IVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQR-------GRCYYPAWMSPEALQKKPGDRNLEACDMW   78 (153)
Q Consensus         6 ~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~-------~~~~~~~~~~pe~~~~~~~~~~~~~~dv~   78 (153)
                      .-++.|||.+++.|+|+.++||+++.++.+++.  |||.+....       ...+++.|++||...+.   ..+.++|+|
T Consensus       113 ~~~l~~lh~~~~~H~dl~~~nil~~~~~~~~l~--d~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~---~~~~~~Dv~  187 (258)
T cd08215         113 CLALKYLHSRKILHRDIKPQNIFLTSNGLVKLG--DFGISKVLSSTVDLAKTVVGTPYYLSPELCQNK---PYNYKSDIW  187 (258)
T ss_pred             HHHHHHHHhCCEecccCChHHeEEcCCCcEEEC--CccceeecccCcceecceeeeecccChhHhccC---CCCccccHH
Confidence            446789999999999999999999999988888  999874321       23567789999987654   345789999


Q ss_pred             HHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581         79 SFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus        79 s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      ++|++++++++|..||............. .......+...+..+.+++.+||..+|++||++.++++
T Consensus       188 slG~~~~~l~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~  254 (258)
T cd08215         188 SLGCVLYELCTLKHPFEGENLLELALKIL-KGQYPPIPSQYSSELRNLVSSLLQKDPEERPSIAQILQ  254 (258)
T ss_pred             HHHHHHHHHHcCCCCCCCCcHHHHHHHHh-cCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence            99999999999999997766555444433 33344556678899999999999999999999999875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>KOG0574|consensus

Probab=99.89  E-value=9.5e-25  Score=144.28  Aligned_cols=136  Identities=22%  Similarity=0.297  Sum_probs=106.2

Q ss_pred             hHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc-------CCcccCCcccCccccccCCCCCCcchhhHHH
Q psy12581          7 VYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ-------RGRCYYPAWMSPEALQKKPGDRNLEACDMWS   79 (153)
Q Consensus         7 ~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~-------~~~~~~~~~~~pe~~~~~~~~~~~~~~dv~s   79 (153)
                      -.++|||...=+|++|+..||+++.+|..|+.  |||.+.+.       .+..|||.||+||++..-   .+..++|+||
T Consensus       140 KGL~YLH~~~KIHRDIKAGNILLNT~G~AKLA--DFGVAGQLTDTMAKRNTVIGTPFWMAPEVI~EI---GY~~~ADIWS  214 (502)
T KOG0574|consen  140 KGLQYLHDLKKIHRDIKAGNILLNTDGIAKLA--DFGVAGQLTDTMAKRNTVIGTPFWMAPEVIEEI---GYDTKADIWS  214 (502)
T ss_pred             hHHHHHHHHHHHHhhcccccEEEcccchhhhh--hccccchhhhhHHhhCccccCcccccHHHHHHh---ccchhhhHhh
Confidence            35789995444555555555566999999999  99998443       445899999999999753   3457899999


Q ss_pred             HHHHHHHHHhCCCCCCCCCchhhhHHHHhhcc-ccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHH
Q psy12581         80 FAVLLWELATREVPFADLTPMEVGMKVALEGL-RITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPI  147 (153)
Q Consensus        80 ~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~  147 (153)
                      +|++..|+..|++||....+......+..++. ....|+.++.++.+|+++||..+|++|-|+.++++.
T Consensus       215 LGITaIEMAEG~PPYsDIHPMRAIFMIPT~PPPTF~KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~H  283 (502)
T KOG0574|consen  215 LGITAIEMAEGRPPYSDIHPMRAIFMIPTKPPPTFKKPEEWSSEFNDFIRSCLIKKPEERKTALRLCEH  283 (502)
T ss_pred             hcchhhhhhcCCCCcccccccceeEeccCCCCCCCCChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhhh
Confidence            99999999999999988777766544433321 333567789999999999999999999999988753

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=99.89  E-value=4.5e-23  Score=139.37  Aligned_cols=138  Identities=22%  Similarity=0.126  Sum_probs=103.4

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccccC--------CcccCCcccCccccccCCCCCCcchhh
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQR--------GRCYYPAWMSPEALQKKPGDRNLEACD   76 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~--------~~~~~~~~~~pe~~~~~~~~~~~~~~d   76 (153)
                      ..-++.|||++++.|+||.+.||+++.++.+++.  |||.+....        ...++..|++||.+.+.  ...+.++|
T Consensus       109 i~~al~~LH~~~~~h~dl~p~nil~~~~~~~~l~--d~g~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~--~~~~~~~D  184 (287)
T cd07840         109 LLEGLQYLHSNGILHRDIKGSNILINNDGVLKLA--DFGLARPYTKRNSADYTNRVITLWYRPPELLLGA--TRYGPEVD  184 (287)
T ss_pred             HHHHHHHHHHCCceeccCcHHHeEEcCCCCEEEc--cccceeeccCCCcccccccccccccCCceeeEcc--ccCChHHH
Confidence            3446789999999999999999999999998888  999874332        23456789999987642  23457899


Q ss_pred             HHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhcccc-----------------------------CCCCCCCHHHHHHH
Q psy12581         77 MWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRI-----------------------------TIPPGISSHLSKLI  127 (153)
Q Consensus        77 v~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~-----------------------------~~~~~~~~~~~~l~  127 (153)
                      +|++|++++++++|+.||...........+......+                             ......+..+.+++
T Consensus       185 v~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i  264 (287)
T cd07840         185 MWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPGVSKLPWFENLKPKKPYKRRLREFFKHLIDPSALDLL  264 (287)
T ss_pred             HHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchhhccccccchhhhhccccccchhHHHHHhcccCCHHHHHHH
Confidence            9999999999999999997766544333222110000                             00111377899999


Q ss_pred             HHHhcCCCCCCCCHHHHHH
Q psy12581        128 RICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus       128 ~~cl~~~p~~Rps~~~~l~  146 (153)
                      .+||..+|++||+++++++
T Consensus       265 ~~~l~~~P~~Rp~~~~~l~  283 (287)
T cd07840         265 DKLLTLDPKKRISADQALQ  283 (287)
T ss_pred             HHHcCCChhhCcCHHHHhh
Confidence            9999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>KOG0199|consensus

Probab=99.89  E-value=2.3e-23  Score=150.09  Aligned_cols=137  Identities=23%  Similarity=0.378  Sum_probs=117.9

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccccCC----------cccCCcccCccccccCCCCCCcch
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQRG----------RCYYPAWMSPEALQKKPGDRNLEA   74 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~~----------~~~~~~~~~pe~~~~~~~~~~~~~   74 (153)
                      .+.+..||..++++|+|+..+|+++-....+||+  |||+...+..          ......|-+||.+...   .|+.+
T Consensus       221 iA~aM~YLeskrlvHRDLAARNlllasprtVKI~--DFGLmRaLg~ned~Yvm~p~rkvPfAWCaPEsLrh~---kFSha  295 (1039)
T KOG0199|consen  221 IAKAMQYLESKRLVHRDLAARNLLLASPRTVKIC--DFGLMRALGENEDMYVMAPQRKVPFAWCAPESLRHR---KFSHA  295 (1039)
T ss_pred             HHHHHHHHhhhhhhhhhhhhhhheecccceeeee--cccceeccCCCCcceEecCCCcCcccccCHhHhccc---ccccc
Confidence            3567889999999999999999999988889999  9999854432          2345679999999864   56689


Q ss_pred             hhHHHHHHHHHHHHh-CCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHH
Q psy12581         75 CDMWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPI  147 (153)
Q Consensus        75 ~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~  147 (153)
                      +|+|++|+++|||++ |+.||.+.....++..+- ++-+++.|..++..+.+++.+||..+|++|||+..+.+.
T Consensus       296 SDvWmyGVTiWEMFtyGEePW~G~~g~qIL~~iD-~~erLpRPk~csedIY~imk~cWah~paDRptFsair~~  368 (1039)
T KOG0199|consen  296 SDVWMYGVTIWEMFTYGEEPWVGCRGIQILKNID-AGERLPRPKYCSEDIYQIMKNCWAHNPADRPTFSAIRED  368 (1039)
T ss_pred             chhhhhhhhHHhhhccCCCCCCCCCHHHHHHhcc-ccccCCCCCCChHHHHHHHHHhccCCccccccHHHHHHh
Confidence            999999999999998 899999998888776654 777888899999999999999999999999999999643

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=99.89  E-value=4.1e-23  Score=141.30  Aligned_cols=137  Identities=18%  Similarity=0.231  Sum_probs=101.4

Q ss_pred             hhHHhhhhc-CCCCCCCeeeeeeeeccccchhhccccccccccc-----CCcccCCcccCccccccCCCCCCcchhhHHH
Q psy12581          6 IVYSFYLNS-KKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ-----RGRCYYPAWMSPEALQKKPGDRNLEACDMWS   79 (153)
Q Consensus         6 ~~~~~~lh~-~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~-----~~~~~~~~~~~pe~~~~~~~~~~~~~~dv~s   79 (153)
                      .-++.|||+ .++.|+||.+.||+++.++.+++.  |||++...     ....++..|++||.+.+.   ..+.++|+||
T Consensus       109 ~~~l~~lH~~~~i~H~dl~p~nil~~~~~~~~l~--dfg~~~~~~~~~~~~~~~~~~~~aPE~~~~~---~~~~~~Diws  183 (308)
T cd06615         109 LRGLTYLREKHKIMHRDVKPSNILVNSRGEIKLC--DFGVSGQLIDSMANSFVGTRSYMSPERLQGT---HYTVQSDIWS  183 (308)
T ss_pred             HHHHHHHHhhCCEEECCCChHHEEEecCCcEEEc--cCCCcccccccccccCCCCcCccChhHhcCC---CCCccchHHH
Confidence            346789997 589999999999999999988888  99987432     234578899999988653   3457899999


Q ss_pred             HHHHHHHHHhCCCCCCCCCchhhhHHHHh-----------------------------------hccccCCC-CCCCHHH
Q psy12581         80 FAVLLWELATREVPFADLTPMEVGMKVAL-----------------------------------EGLRITIP-PGISSHL  123 (153)
Q Consensus        80 ~g~~~~~~~~g~~p~~~~~~~~~~~~~~~-----------------------------------~~~~~~~~-~~~~~~~  123 (153)
                      +|++++++++|..||..............                                   ....+..| ...+.++
T Consensus       184 lG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (308)
T cd06615         184 LGLSLVEMAIGRYPIPPPDAKELEAMFGRPVSEGEAKESHRPVSGHPPDSPRPMAIFELLDYIVNEPPPKLPSGAFSDEF  263 (308)
T ss_pred             HHHHHHHHHhCCCCCCCcchhhHHHhhcCccccccccCCcccccCCCCCccchhhHHHHHHHHhcCCCccCcCcccCHHH
Confidence            99999999999999865432221110000                                   00011111 1256789


Q ss_pred             HHHHHHHhcCCCCCCCCHHHHHHH
Q psy12581        124 SKLIRICMNEDPGKRPTFDMVLPI  147 (153)
Q Consensus       124 ~~l~~~cl~~~p~~Rps~~~~l~~  147 (153)
                      .+++.+||..+|++||+++++++.
T Consensus       264 ~~li~~~l~~~P~~Rpt~~~ll~~  287 (308)
T cd06615         264 QDFVDKCLKKNPKERADLKELTKH  287 (308)
T ss_pred             HHHHHHHccCChhhCcCHHHHhcC
Confidence            999999999999999999999754

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=99.89  E-value=7.7e-23  Score=139.00  Aligned_cols=138  Identities=16%  Similarity=0.130  Sum_probs=102.2

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeecc-ccchhhccccccccccc-------CCcccCCcccCccccccCCCCCCcchhh
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDE-DLTARINMADAQFSFQQ-------RGRCYYPAWMSPEALQKKPGDRNLEACD   76 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~-~~~~kl~~~d~g~~~~~-------~~~~~~~~~~~pe~~~~~~~~~~~~~~d   76 (153)
                      ..-++.|||++++.|+||.++||+++. ++.+|+.  |||++...       ....+++.|++||.+.+.  ...+.++|
T Consensus       111 i~~aL~~LH~~~i~H~dl~p~nill~~~~~~~kl~--dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~--~~~~~~~D  186 (294)
T PLN00009        111 ILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLA--DFGLARAFGIPVRTFTHEVVTLWYRAPEILLGS--RHYSTPVD  186 (294)
T ss_pred             HHHHHHHHHhCCeeCCCCCcceEEEECCCCEEEEc--ccccccccCCCccccccCceeecccCHHHHhCC--CCCCcHHH
Confidence            355789999999999999999999985 4556777  99987432       122456789999988652  13457899


Q ss_pred             HHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccc-------------------c--C------CCCCCCHHHHHHHHH
Q psy12581         77 MWSFAVLLWELATREVPFADLTPMEVGMKVALEGLR-------------------I--T------IPPGISSHLSKLIRI  129 (153)
Q Consensus        77 v~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~-------------------~--~------~~~~~~~~~~~l~~~  129 (153)
                      +||+|++++++++|..||..........+.......                   .  .      .....+..+.+++.+
T Consensus       187 v~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~  266 (294)
T PLN00009        187 IWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPGVTSLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSK  266 (294)
T ss_pred             HHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccccccchhhhhhcccCCCCCHHHhCcCCChHHHHHHHH
Confidence            999999999999999999776544433332210000                   0  0      112457789999999


Q ss_pred             HhcCCCCCCCCHHHHHH
Q psy12581        130 CMNEDPGKRPTFDMVLP  146 (153)
Q Consensus       130 cl~~~p~~Rps~~~~l~  146 (153)
                      |+..+|++||++.++++
T Consensus       267 ~l~~~P~~Rps~~~~l~  283 (294)
T PLN00009        267 MLRLDPSKRITARAALE  283 (294)
T ss_pred             HccCChhhCcCHHHHhc
Confidence            99999999999999874

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=99.89  E-value=2.9e-23  Score=143.48  Aligned_cols=138  Identities=19%  Similarity=0.150  Sum_probs=103.6

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc-----------CCcccCCcccCccccccCCCCCCcc
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ-----------RGRCYYPAWMSPEALQKKPGDRNLE   73 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~-----------~~~~~~~~~~~pe~~~~~~~~~~~~   73 (153)
                      ..-++.|||++++.|+||.++||+++.++.+|+.  |||++...           ....++..|++||.+...  ...+.
T Consensus       116 i~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~kl~--dfg~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~--~~~~~  191 (334)
T cd07855         116 LLRGLKYIHSANVIHRDLKPSNLLVNEDCELRIG--DFGMARGLSSSPTEHKYFMTEYVATRWYRAPELLLSL--PEYTT  191 (334)
T ss_pred             HHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEec--ccccceeecccCcCCCcccccccccccccChHHhcCC--ccccc
Confidence            4457899999999999999999999999998888  99987332           123567789999987542  13457


Q ss_pred             hhhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhh------------------------ccccCC-----CCCCCHHHH
Q psy12581         74 ACDMWSFAVLLWELATREVPFADLTPMEVGMKVALE------------------------GLRITI-----PPGISSHLS  124 (153)
Q Consensus        74 ~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~------------------------~~~~~~-----~~~~~~~~~  124 (153)
                      ++|+|++|++++++++|+.||.+.........+...                        ......     ....+..+.
T Consensus       192 ~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  271 (334)
T cd07855         192 AIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEVLNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEAL  271 (334)
T ss_pred             ccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhHhhhhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHH
Confidence            899999999999999999999765443322111100                        000111     133578899


Q ss_pred             HHHHHHhcCCCCCCCCHHHHHH
Q psy12581        125 KLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus       125 ~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      +++.+||+.+|++||++++++.
T Consensus       272 ~li~~~l~~~P~~Rpt~~~~l~  293 (334)
T cd07855         272 DLLSQMLQFDPEERITVEQALQ  293 (334)
T ss_pred             HHHHHHccCChhhCcCHHHHHh
Confidence            9999999999999999999875

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=99.89  E-value=5.8e-23  Score=141.91  Aligned_cols=138  Identities=17%  Similarity=0.132  Sum_probs=102.6

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc-----------CCcccCCcccCccccccCCCCCCcc
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ-----------RGRCYYPAWMSPEALQKKPGDRNLE   73 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~-----------~~~~~~~~~~~pe~~~~~~~~~~~~   73 (153)
                      ..-++.|||+.++.|+||.+.||+++.++.+++.  |||.+...           ....++..|++||.+.+.  ...+.
T Consensus       114 i~~aL~~LH~~givH~dlkp~Nili~~~~~~kl~--Dfg~a~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~--~~~~~  189 (332)
T cd07857         114 ILCGLKYIHSANVLHRDLKPGNLLVNADCELKIC--DFGLARGFSENPGENAGFMTEYVATRWYRAPEIMLSF--QSYTK  189 (332)
T ss_pred             HHHHHHHHHhCCcccCCCCHHHeEEcCCCCEEeC--cCCCceecccccccccccccCcccCccccCcHHHhCC--CCCCc
Confidence            3457899999999999999999999999988888  99987432           122577889999987542  23457


Q ss_pred             hhhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhh--------------------------cccc---CCCCCCCHHHH
Q psy12581         74 ACDMWSFAVLLWELATREVPFADLTPMEVGMKVALE--------------------------GLRI---TIPPGISSHLS  124 (153)
Q Consensus        74 ~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~--------------------------~~~~---~~~~~~~~~~~  124 (153)
                      ++|+||+|++++++++|..||.+.........+...                          ....   ......+..+.
T Consensus       190 ~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  269 (332)
T cd07857         190 AIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEETLSRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLAL  269 (332)
T ss_pred             HHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCHHHHHhhhhhhHHHHHHhccccCCcchHhhCCCCCHHHH
Confidence            899999999999999999998765433222111100                          0000   01123467899


Q ss_pred             HHHHHHhcCCCCCCCCHHHHHH
Q psy12581        125 KLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus       125 ~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      +++.+||+.+|++|||+.+++.
T Consensus       270 ~li~~~l~~~P~~R~t~~~ll~  291 (332)
T cd07857         270 DLLEKLLAFDPTKRISVEEALE  291 (332)
T ss_pred             HHHHHHccCCcccCCCHHHHhc
Confidence            9999999999999999999873

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=99.89  E-value=5e-23  Score=140.31  Aligned_cols=139  Identities=17%  Similarity=0.093  Sum_probs=103.8

Q ss_pred             chhhHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccccC--------CcccCCcccCccccccCCCCCCcchh
Q psy12581          4 KKIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQR--------GRCYYPAWMSPEALQKKPGDRNLEAC   75 (153)
Q Consensus         4 ~~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~--------~~~~~~~~~~pe~~~~~~~~~~~~~~   75 (153)
                      ...-++.|||+.++.|+|+.+.||+++.++.+|+.  |||.+....        ...++..|++||.+.+.  ...+.++
T Consensus       124 qi~~aL~~LH~~~i~H~dl~p~nili~~~~~~kl~--dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~--~~~~~~~  199 (302)
T cd07864         124 QLLEGLNYCHKKNFLHRDIKCSNILLNNKGQIKLA--DFGLARLYNSEESRPYTNKVITLWYRPPELLLGE--ERYGPAI  199 (302)
T ss_pred             HHHHHHHHHHhCCeecCCCCHHHEEECCCCcEEeC--cccccccccCCcccccccceeccCccChHHhcCC--CCCCchh
Confidence            34567899999999999999999999999998888  999874321        12346679999987642  1345789


Q ss_pred             hHHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhcccc----------------------------CCCCCCCHHHHHHH
Q psy12581         76 DMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRI----------------------------TIPPGISSHLSKLI  127 (153)
Q Consensus        76 dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~----------------------------~~~~~~~~~~~~l~  127 (153)
                      |+|++|++++++++|+.||...........+......+                            ......+..+.+++
T Consensus       200 Di~slG~~~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  279 (302)
T cd07864         200 DVWSCGCILGELFTKKPIFQANQELAQLELISRLCGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLL  279 (302)
T ss_pred             HHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhhcccccccccccccccccccccchhhhcCCCCHHHHHHH
Confidence            99999999999999999997655443332221110000                            01123578899999


Q ss_pred             HHHhcCCCCCCCCHHHHHH
Q psy12581        128 RICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus       128 ~~cl~~~p~~Rps~~~~l~  146 (153)
                      .+||..+|++||++++++.
T Consensus       280 ~~~l~~~P~~Rp~~~~il~  298 (302)
T cd07864         280 DHMLTLDPSKRCTAEEALN  298 (302)
T ss_pred             HHHccCChhhCCCHHHHhc
Confidence            9999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=99.89  E-value=7.6e-23  Score=141.87  Aligned_cols=137  Identities=18%  Similarity=0.165  Sum_probs=100.1

Q ss_pred             hhHHhhhhcCCCCCCCeeeeeeeecc-ccchhhcccccccccccC----------CcccCCcccCccccccCCCCCCcch
Q psy12581          6 IVYSFYLNSKKSKTSNAFLFCCQIDE-DLTARINMADAQFSFQQR----------GRCYYPAWMSPEALQKKPGDRNLEA   74 (153)
Q Consensus         6 ~~~~~~lh~~~i~~~ni~~~~~~~~~-~~~~kl~~~d~g~~~~~~----------~~~~~~~~~~pe~~~~~~~~~~~~~   74 (153)
                      .-++.|||++++.|+||.+.||+++. ++.+++.  |||.+....          ...++..|++||.+...  ...+.+
T Consensus       124 ~~aL~~LH~~givH~dikp~Nili~~~~~~~kl~--dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~  199 (342)
T cd07854         124 LRGLKYIHSANVLHRDLKPANVFINTEDLVLKIG--DFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSP--NNYTKA  199 (342)
T ss_pred             HHHHHHHHhCCcccCCCCHHHEEEcCCCceEEEC--CcccceecCCccccccccccccccccccCHHHHhCc--cccCch
Confidence            45678999999999999999999974 4556777  999874321          12457789999986542  234578


Q ss_pred             hhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhc----------------------c-ccC-----CCCCCCHHHHHH
Q psy12581         75 CDMWSFAVLLWELATREVPFADLTPMEVGMKVALEG----------------------L-RIT-----IPPGISSHLSKL  126 (153)
Q Consensus        75 ~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~----------------------~-~~~-----~~~~~~~~~~~l  126 (153)
                      +|+||+|++++++++|..||................                      . ...     .....+.++.++
T Consensus       200 ~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  279 (342)
T cd07854         200 IDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILESVPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDF  279 (342)
T ss_pred             hhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHH
Confidence            999999999999999999997655433322221100                      0 000     112467789999


Q ss_pred             HHHHhcCCCCCCCCHHHHHH
Q psy12581        127 IRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus       127 ~~~cl~~~p~~Rps~~~~l~  146 (153)
                      +.+||+.||++|||+++++.
T Consensus       280 i~~~L~~dP~~R~t~~ell~  299 (342)
T cd07854         280 LEQILTFNPMDRLTAEEALM  299 (342)
T ss_pred             HHHHhCCCchhccCHHHHhC
Confidence            99999999999999999873

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=99.89  E-value=3.6e-23  Score=139.93  Aligned_cols=137  Identities=18%  Similarity=0.100  Sum_probs=103.7

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccccC------CcccCCcccCccccccCCCCCCcchhhHH
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQR------GRCYYPAWMSPEALQKKPGDRNLEACDMW   78 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~------~~~~~~~~~~pe~~~~~~~~~~~~~~dv~   78 (153)
                      ..-++.|||+.++.|+|+.+.||+++.++.+++.  |||.+....      ...++..|++||.+.+.   ..+.++|+|
T Consensus       116 i~~al~~LH~~~i~h~~l~~~nili~~~~~~~l~--dfg~~~~~~~~~~~~~~~~~~~~~~PE~~~~~---~~~~~~Di~  190 (287)
T cd07838         116 LLRGVDFLHSHRIVHRDLKPQNILVTSDGQVKIA--DFGLARIYSFEMALTSVVVTLWYRAPEVLLQS---SYATPVDMW  190 (287)
T ss_pred             HHHHHHHHHHCCeeeccCChhhEEEccCCCEEEe--ccCcceeccCCcccccccccccccChHHhccC---CCCCcchhh
Confidence            3457899999999999999999999999988888  999874331      22467789999998764   345789999


Q ss_pred             HHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccc-----------------cCC--------CCCCCHHHHHHHHHHhcC
Q psy12581         79 SFAVLLWELATREVPFADLTPMEVGMKVALEGLR-----------------ITI--------PPGISSHLSKLIRICMNE  133 (153)
Q Consensus        79 s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~-----------------~~~--------~~~~~~~~~~l~~~cl~~  133 (153)
                      |+|++++++++|.+||......+...++......                 ...        ....+..+.+++.+||+.
T Consensus       191 s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~  270 (287)
T cd07838         191 SVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSEEEWPRNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTF  270 (287)
T ss_pred             hHHHHHHHHHhCCCcccCCChHHHHHHHHHHcCCCChHhcCCCcccchhhcccccccchhhhhhhhhHHHHHHHHHHhcc
Confidence            9999999999999998876655544333221000                 000        012346778999999999


Q ss_pred             CCCCCCCHHHHHH
Q psy12581        134 DPGKRPTFDMVLP  146 (153)
Q Consensus       134 ~p~~Rps~~~~l~  146 (153)
                      ||++||++++++.
T Consensus       271 dp~~Rp~~~~il~  283 (287)
T cd07838         271 NPHKRISAFEALQ  283 (287)
T ss_pred             CCccCCCHHHHhc
Confidence            9999999999875

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=99.89  E-value=8.1e-24  Score=146.13  Aligned_cols=140  Identities=18%  Similarity=0.211  Sum_probs=106.2

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc--------CCcccCCcccCccccccCC--CCCCcch
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ--------RGRCYYPAWMSPEALQKKP--GDRNLEA   74 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~--------~~~~~~~~~~~pe~~~~~~--~~~~~~~   74 (153)
                      ...+++|||++++.|+||++.||+++.++.+|+.  |||++...        ....|++.|++||.+.+..  ...++.+
T Consensus       111 i~~~L~~lH~~~iiHrDlkp~Nill~~~~~~kl~--DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~  188 (331)
T cd05624         111 MVLAIHSIHQLHYVHRDIKPDNVLLDMNGHIRLA--DFGSCLKMNQDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPE  188 (331)
T ss_pred             HHHHHHHHHHCCeeeccCchHHEEEcCCCCEEEE--eccceeeccCCCceeeccccCCcccCCHHHHhccccCCCCCCCc
Confidence            4567899999999999999999999999988888  99987432        1236889999999886421  1234578


Q ss_pred             hhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCCC---CCCHHHHHHHHHHhcCCCCC--CCCHHHHHH
Q psy12581         75 CDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPP---GISSHLSKLIRICMNEDPGK--RPTFDMVLP  146 (153)
Q Consensus        75 ~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~~cl~~~p~~--Rps~~~~l~  146 (153)
                      +|+||+|+++|++++|+.||...........+.......+.|.   ..+..+.+++.+|+..++++  |++++++++
T Consensus       189 ~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~  265 (331)
T cd05624         189 CDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFPSHITDVSEEAKDLIQRLICSRERRLGQNGIEDFKK  265 (331)
T ss_pred             ccEEeeehhhhhhhhCCCCccCCCHHHHHHHHHcCCCcccCCCccccCCHHHHHHHHHHccCchhhcCCCCHHHHhc
Confidence            9999999999999999999987766555555544333333333   35789999999999876544  357777764

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=99.89  E-value=6.6e-23  Score=142.21  Aligned_cols=137  Identities=18%  Similarity=0.157  Sum_probs=104.0

Q ss_pred             hhHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccccC----CcccCCcccCccccccCCCCCCcchhhHHHHH
Q psy12581          6 IVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQR----GRCYYPAWMSPEALQKKPGDRNLEACDMWSFA   81 (153)
Q Consensus         6 ~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~----~~~~~~~~~~pe~~~~~~~~~~~~~~dv~s~g   81 (153)
                      .-++.|||++++.|+||.+.||+++.++.+++.  |||.+....    ...++..|++||.+.+..  ..+.++|+||+|
T Consensus       128 ~~aL~~LH~~gi~H~dlkp~Nill~~~~~~kL~--dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~--~~~~~~DvwslG  203 (343)
T cd07851         128 LRGLKYIHSAGIIHRDLKPSNIAVNEDCELKIL--DFGLARHTDDEMTGYVATRWYRAPEIMLNWM--HYNQTVDIWSVG  203 (343)
T ss_pred             HHHHHHHHHCCeecCCCCHHHeEECCCCCEEEc--cccccccccccccCCcccccccCHHHHhCCC--CCCchHhHHHHH
Confidence            456789999999999999999999999988887  999885432    235677899999876421  345789999999


Q ss_pred             HHHHHHHhCCCCCCCCCchhhhHHHHhhccc-----------------------c------CCCCCCCHHHHHHHHHHhc
Q psy12581         82 VLLWELATREVPFADLTPMEVGMKVALEGLR-----------------------I------TIPPGISSHLSKLIRICMN  132 (153)
Q Consensus        82 ~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~-----------------------~------~~~~~~~~~~~~l~~~cl~  132 (153)
                      ++++++++|+.||.+.........+......                       .      ......+..+.+++.+||.
T Consensus       204 v~l~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~  283 (343)
T cd07851         204 CIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDEELLQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLV  283 (343)
T ss_pred             HHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCC
Confidence            9999999999999766544333222211000                       0      0012357889999999999


Q ss_pred             CCCCCCCCHHHHHH
Q psy12581        133 EDPGKRPTFDMVLP  146 (153)
Q Consensus       133 ~~p~~Rps~~~~l~  146 (153)
                      .+|++|||+.++++
T Consensus       284 ~~P~~Rpt~~ell~  297 (343)
T cd07851         284 LDPDKRITAAEALA  297 (343)
T ss_pred             CChhhCCCHHHHhc
Confidence            99999999999875

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=99.89  E-value=1.2e-22  Score=134.98  Aligned_cols=131  Identities=25%  Similarity=0.285  Sum_probs=105.6

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc-------CCcccCCcccCccccccCCCCCCcchhhH
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ-------RGRCYYPAWMSPEALQKKPGDRNLEACDM   77 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~-------~~~~~~~~~~~pe~~~~~~~~~~~~~~dv   77 (153)
                      ..-++.|||.+++.|+||.+.||+++.++.+++.  |||.+...       ....++..|++||...+.   ..+.++|+
T Consensus       102 i~~~l~~lh~~~~~H~~l~p~ni~~~~~~~~~l~--d~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~---~~~~~~D~  176 (250)
T cd05123         102 IVLALEYLHSLGIIYRDLKPENILLDADGHIKLT--DFGLAKELSSEGSRTNTFCGTPEYLAPEVLLGK---GYGKAVDW  176 (250)
T ss_pred             HHHHHHHHHHCCceecCCCcceEEEcCCCcEEEe--ecCcceecccCCCcccCCcCCccccChHHhCCC---CCCchhhH
Confidence            3456789999999999999999999999988887  99987432       223567789999998753   34578999


Q ss_pred             HHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHH
Q psy12581         78 WSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFD  142 (153)
Q Consensus        78 ~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~  142 (153)
                      |++|++++++++|..||...........+..  ...+.+...+..+.+++.+||..+|+.||++.
T Consensus       177 ~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~i~~~l~~~p~~R~~~~  239 (250)
T cd05123         177 WSLGVLLYEMLTGKPPFYAEDRKEIYEKILK--DPLRFPEFLSPEARDLISGLLQKDPTKRLGSG  239 (250)
T ss_pred             HHHHHHHHHHHHCCCCCCCCCHHHHHHHHhc--CCCCCCCCCCHHHHHHHHHHhcCCHhhCCCcc
Confidence            9999999999999999977665444333333  34556777789999999999999999999994

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>KOG0663|consensus

Probab=99.89  E-value=5.5e-23  Score=136.98  Aligned_cols=135  Identities=19%  Similarity=0.092  Sum_probs=109.3

Q ss_pred             HHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc-------CCcccCCcccCccccccCCCCCCcchhhHHHH
Q psy12581          8 YSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ-------RGRCYYPAWMSPEALQKKPGDRNLEACDMWSF   80 (153)
Q Consensus         8 ~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~-------~~~~~~~~~~~pe~~~~~~~~~~~~~~dv~s~   80 (153)
                      +.+|||++.|.|+|++++|++++..|.+|+.  |||+|..-       +...-|.+|.+||.+.+.+  .++...|+||+
T Consensus       189 glk~lH~~wilHRDLK~SNLLm~~~G~lKia--DFGLAR~ygsp~k~~T~lVVTLWYRaPELLLG~~--tyst~iDMWSv  264 (419)
T KOG0663|consen  189 GLKHLHDNWILHRDLKTSNLLLSHKGILKIA--DFGLAREYGSPLKPYTPLVVTLWYRAPELLLGAK--TYSTAVDMWSV  264 (419)
T ss_pred             HHHHHhhceeEecccchhheeeccCCcEEec--ccchhhhhcCCcccCcceEEEeeecCHHHhcCCc--ccCcchhhhhH
Confidence            5789999999999999999999999999999  99999543       3446688999999998764  45688999999


Q ss_pred             HHHHHHHHhCCCCCCCCCchhhhHHHHhhccccC--------------------CC---------CC-CCHHHHHHHHHH
Q psy12581         81 AVLLWELATREVPFADLTPMEVGMKVALEGLRIT--------------------IP---------PG-ISSHLSKLIRIC  130 (153)
Q Consensus        81 g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~--------------------~~---------~~-~~~~~~~l~~~c  130 (153)
                      ||++.|++++++-|.+.....+..++...-..+.                    .|         .. .+....+++..+
T Consensus       265 GCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~iwpg~~~lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~l  344 (419)
T KOG0663|consen  265 GCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIWPGYSELPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKL  344 (419)
T ss_pred             HHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccccCCCccccchhhccccCCCCchhhhhhccccccchhHHHHHHHH
Confidence            9999999999999999888777776643211110                    00         11 346788999999


Q ss_pred             hcCCCCCCCCHHHHHH
Q psy12581        131 MNEDPGKRPTFDMVLP  146 (153)
Q Consensus       131 l~~~p~~Rps~~~~l~  146 (153)
                      |..||.+|.|+++.++
T Consensus       345 lt~dP~kR~tA~~~L~  360 (419)
T KOG0663|consen  345 LTYDPGKRITAEDGLK  360 (419)
T ss_pred             hccCccccccHHHhhc
Confidence            9999999999999874

>KOG1006|consensus

Probab=99.89  E-value=7.9e-24  Score=137.36  Aligned_cols=138  Identities=19%  Similarity=0.249  Sum_probs=104.5

Q ss_pred             hhHHhhhhc-CCCCCCCeeeeeeeeccccchhhccccccccccc------CCcccCCcccCccccccCCCCCCcchhhHH
Q psy12581          6 IVYSFYLNS-KKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ------RGRCYYPAWMSPEALQKKPGDRNLEACDMW   78 (153)
Q Consensus         6 ~~~~~~lh~-~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~------~~~~~~~~~~~pe~~~~~~~~~~~~~~dv~   78 (153)
                      .-|+.||-. ..|+|++|+++||+++..|.+|++  |||++.++      +.-.|...|||||.+..... .+..++|+|
T Consensus       177 V~AL~yLK~~lkiIHRDvKPSNILldr~G~vKLC--DFGIcGqLv~SiAkT~daGCrpYmAPERi~p~~~-gyDiRSDvW  253 (361)
T KOG1006|consen  177 VDALDYLKEELKIIHRDVKPSNILLDRHGDVKLC--DFGICGQLVDSIAKTVDAGCRPYMAPERIDPSDK-GYDIRSDVW  253 (361)
T ss_pred             hhHHHHHHHHhhhhhccCChhheEEecCCCEeee--cccchHhHHHHHHhhhccCCccccChhccCCccC-Ccchhhhhh
Confidence            345667763 457888888888888999999999  99998443      33467789999999976533 467899999


Q ss_pred             HHHHHHHHHHhCCCCCCCCCch-hhhHHHHhhcc-ccCCCC---CCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581         79 SFAVLLWELATREVPFADLTPM-EVGMKVALEGL-RITIPP---GISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus        79 s~g~~~~~~~~g~~p~~~~~~~-~~~~~~~~~~~-~~~~~~---~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      |+|++++|+.||..||.+.+.. ++...++.... .+..+.   ..+..+..++.-|+..|-+.||++.++.+
T Consensus       254 SLGITL~EvAtG~fPyr~w~svfeql~~Vv~gdpp~l~~~~~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~  326 (361)
T KOG1006|consen  254 SLGITLYEVATGNFPYRKWDSVFEQLCQVVIGDPPILLFDKECVHYSFSMVRFINTCLIKDRSDRPKYDDLKK  326 (361)
T ss_pred             hhcceEeeeecCCCCcchHHHHHHHHHHHHcCCCCeecCcccccccCHHHHHHHHHHhhcccccCcchhhhhc
Confidence            9999999999999999886543 33333333322 222232   37889999999999999999999998764

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=99.89  E-value=5.7e-23  Score=142.18  Aligned_cols=139  Identities=18%  Similarity=0.160  Sum_probs=103.5

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccccC------------CcccCCcccCccccccCCCCCCc
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQR------------GRCYYPAWMSPEALQKKPGDRNL   72 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~------------~~~~~~~~~~pe~~~~~~~~~~~   72 (153)
                      .+-++.|||+.++.|++|.+.||+++.++.+|+.  |||.+....            ...++..|++||.+.+.  ...+
T Consensus       116 i~~~L~~LH~~~i~H~dl~p~nill~~~~~~kl~--d~g~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~  191 (337)
T cd07852         116 LLKALKYIHSGNVIHRDLKPSNILLNSDCRVKLA--DFGLARSLSELEENPENPVLTDYVATRWYRAPEILLGS--TRYT  191 (337)
T ss_pred             HHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEEe--eccchhccccccccccCcchhcccccccccCceeeecc--cccc
Confidence            3456789999999999999999999999999988  999874221            12467789999987642  2345


Q ss_pred             chhhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhc--------------------------cc---cCCCCCCCHHH
Q psy12581         73 EACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEG--------------------------LR---ITIPPGISSHL  123 (153)
Q Consensus        73 ~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~--------------------------~~---~~~~~~~~~~~  123 (153)
                      .++|+||+|++++++++|+.||.+........++....                          ..   .......+..+
T Consensus       192 ~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  271 (337)
T cd07852         192 KGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAEDIESIKSPFAATMLDSLPSRPRKPLDELLPKASDDA  271 (337)
T ss_pred             ccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHHhhhHHHhhhhcccccccchhhhccCCCHHH
Confidence            78999999999999999999997654433222211110                          00   00112357889


Q ss_pred             HHHHHHHhcCCCCCCCCHHHHHHH
Q psy12581        124 SKLIRICMNEDPGKRPTFDMVLPI  147 (153)
Q Consensus       124 ~~l~~~cl~~~p~~Rps~~~~l~~  147 (153)
                      .+++.+||+.+|++|||+.++++.
T Consensus       272 ~~li~~~l~~~P~~Rps~~~il~~  295 (337)
T cd07852         272 LDLLKKLLVFNPNKRLTAEEALEH  295 (337)
T ss_pred             HHHHHHhccCCcccccCHHHHhhC
Confidence            999999999999999999999853

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=99.89  E-value=1e-22  Score=137.37  Aligned_cols=136  Identities=21%  Similarity=0.256  Sum_probs=103.5

Q ss_pred             hhHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccccC------CcccCCcccCccccccCCCCCCcchhhHHH
Q psy12581          6 IVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQR------GRCYYPAWMSPEALQKKPGDRNLEACDMWS   79 (153)
Q Consensus         6 ~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~------~~~~~~~~~~pe~~~~~~~~~~~~~~dv~s   79 (153)
                      .-++.|||++++.|++|.+.||+++.++.+++.  |||.+....      ...++..|++||.+.+.   ..+.++|+|+
T Consensus       105 ~~~l~~lH~~~i~H~di~p~Nil~~~~~~~~l~--dfg~~~~~~~~~~~~~~~~~~~y~~PE~~~~~---~~~~~~Di~s  179 (277)
T cd05577         105 ICGLEHLHQRRIVYRDLKPENVLLDDHGNVRIS--DLGLAVELKGGKKIKGRAGTPGYMAPEVLQGE---VYDFSVDWFA  179 (277)
T ss_pred             HHHHHHHHhCCcccCCCCHHHEEECCCCCEEEc--cCcchhhhccCCccccccCCCCcCCHHHhcCC---CCCchhhhHH
Confidence            346789999999999999999999999988888  999874321      23456789999998753   3457899999


Q ss_pred             HHHHHHHHHhCCCCCCCCCchhhhHHHHh--hccccCCCCCCCHHHHHHHHHHhcCCCCCCC-----CHHHHHH
Q psy12581         80 FAVLLWELATREVPFADLTPMEVGMKVAL--EGLRITIPPGISSHLSKLIRICMNEDPGKRP-----TFDMVLP  146 (153)
Q Consensus        80 ~g~~~~~~~~g~~p~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----s~~~~l~  146 (153)
                      +|++++++++|+.||...........+..  .......+...++.+.+++.+||+.+|++||     ++.++++
T Consensus       180 lG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~  253 (277)
T cd05577         180 LGCTLYEMIAGRSPFRQRKEKVEKEELKRRTLEMAVEYPDKFSPEAKDLCEALLQKDPEKRLGCRGGSADEVRE  253 (277)
T ss_pred             HHHHHHHHhhCCCCCCCCcccccHHHHHhccccccccCCccCCHHHHHHHHHHccCChhHccCCCcccHHHHHh
Confidence            99999999999999976543221111111  1123344566789999999999999999999     6666653

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=99.89  E-value=9.2e-23  Score=135.62  Aligned_cols=136  Identities=24%  Similarity=0.401  Sum_probs=108.2

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccccC-------CcccCCcccCccccccCCCCCCcchhhH
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQR-------GRCYYPAWMSPEALQKKPGDRNLEACDM   77 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~-------~~~~~~~~~~pe~~~~~~~~~~~~~~dv   77 (153)
                      ..-++.|||+.++.|++|.+.||+++.++.+++.  |||.+....       ...++..|++||...+..   .+.++|+
T Consensus       108 i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~~l~--d~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~---~~~~~Dv  182 (254)
T cd06627         108 VLQGLAYLHEQGVIHRDIKAANILTTKDGVVKLA--DFGVATKLNDVSKDDASVVGTPYWMAPEVIEMSG---ASTASDI  182 (254)
T ss_pred             HHHHHHHHhhCCcccCCCCHHHEEECCCCCEEEe--ccccceecCCCcccccccccchhhcCHhhhcCCC---CCcchhH
Confidence            3456789999999999999999999999888888  999884332       235677899999886532   4578999


Q ss_pred             HHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581         78 WSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus        78 ~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      |++|++++++++|..|+............. .......+...+..+.+++.+||..+|++||++.+++.
T Consensus       183 ~~lG~~l~~l~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~  250 (254)
T cd06627         183 WSLGCTVIELLTGNPPYYDLNPMAALFRIV-QDDHPPLPEGISPELKDFLMQCFQKDPNLRPTAKQLLK  250 (254)
T ss_pred             HHHHHHHHHHHhCCCCCCCccHHHHHHHHh-ccCCCCCCCCCCHHHHHHHHHHHhCChhhCcCHHHHhc
Confidence            999999999999999997765444333322 23344556678899999999999999999999998874

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=99.89  E-value=8.7e-23  Score=136.88  Aligned_cols=137  Identities=22%  Similarity=0.248  Sum_probs=104.5

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeecccc-chhhcccccccccccC-----------CcccCCcccCccccccCCCCCCc
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDL-TARINMADAQFSFQQR-----------GRCYYPAWMSPEALQKKPGDRNL   72 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~-~~kl~~~d~g~~~~~~-----------~~~~~~~~~~pe~~~~~~~~~~~   72 (153)
                      ..-++.|||++++.|+||.+.||+++.++ .+++.  |||.+....           ...++..|++||.+.+.   ..+
T Consensus       112 l~~al~~LH~~~i~H~~i~~~nil~~~~~~~~~l~--dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~---~~~  186 (268)
T cd06630         112 LLRGLSYLHENQIIHRDVKGANLLIDSTGQRLRIA--DFGAAARLAAKGTGAGEFQGQLLGTIAFMAPEVLRGE---QYG  186 (268)
T ss_pred             HHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEc--ccccccccccccccCCccccccccccceeCHhHhccC---CCC
Confidence            34567899999999999999999998765 46777  999874322           12467789999998654   344


Q ss_pred             chhhHHHHHHHHHHHHhCCCCCCCCCchhhhHHH---HhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581         73 EACDMWSFAVLLWELATREVPFADLTPMEVGMKV---ALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus        73 ~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      .++|+|++|++++++++|..||...........+   .........+...++.+.+++.+||..+|++||++.++++
T Consensus       187 ~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~  263 (268)
T cd06630         187 RSCDVWSVGCVIIEMATAKPPWNAEKHSNHLALIFKIASATTAPSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLK  263 (268)
T ss_pred             cccchHHHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhccCCCCCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhc
Confidence            7899999999999999999999654432222211   1122234456667899999999999999999999999875

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=99.89  E-value=7.4e-23  Score=140.23  Aligned_cols=138  Identities=20%  Similarity=0.104  Sum_probs=100.6

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeecc----ccchhhcccccccccccC----------CcccCCcccCccccccCCCCC
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDE----DLTARINMADAQFSFQQR----------GRCYYPAWMSPEALQKKPGDR   70 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~----~~~~kl~~~d~g~~~~~~----------~~~~~~~~~~pe~~~~~~~~~   70 (153)
                      ..-+..|||++++.|+||.++||+++.    ++.+|+.  |||++....          ...++..|++||.+.+..  .
T Consensus       117 i~~~l~~lH~~~i~h~dlkp~Nil~~~~~~~~~~~kl~--Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~--~  192 (316)
T cd07842         117 ILNGVHYLHSNWVLHRDLKPANILVMGEGPERGVVKIG--DLGLARLFNAPLKPLADLDPVVVTIWYRAPELLLGAR--H  192 (316)
T ss_pred             HHHHHHHHHhCCEeeCCCCHHHEEEcCCCCccceEEEC--CCccccccCCCcccccccCCccccccccCHHHHhCCC--C
Confidence            345678999999999999999999999    8888888  999874321          224577899999876532  3


Q ss_pred             CcchhhHHHHHHHHHHHHhCCCCCCCCCchh---------hhHHHHh------------------------hccccCCC-
Q psy12581         71 NLEACDMWSFAVLLWELATREVPFADLTPME---------VGMKVAL------------------------EGLRITIP-  116 (153)
Q Consensus        71 ~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~---------~~~~~~~------------------------~~~~~~~~-  116 (153)
                      ++.++|+||+|++++++++|..||.+.....         ....++.                        .......+ 
T Consensus       193 ~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  272 (316)
T cd07842         193 YTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLERIFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPS  272 (316)
T ss_pred             CCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHHHHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCC
Confidence            4578999999999999999999997544322         0000000                        00001111 


Q ss_pred             ----------CCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581        117 ----------PGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus       117 ----------~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                                ...+..+.+++.+||+.+|++|||+.++++
T Consensus       273 ~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~  312 (316)
T cd07842         273 NSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALE  312 (316)
T ss_pred             ccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence                      145668899999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=99.89  E-value=8.8e-23  Score=139.51  Aligned_cols=138  Identities=18%  Similarity=0.128  Sum_probs=102.1

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccccCC------------------cccCCcccCccccccC
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQRG------------------RCYYPAWMSPEALQKK   66 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~~------------------~~~~~~~~~pe~~~~~   66 (153)
                      ..-++.|||++++.|+|+.+.||+++.++.+++.  |||++.....                  ..+++.|++||.+.+.
T Consensus       124 l~~al~~lH~~~i~H~dl~p~nil~~~~~~~~l~--dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  201 (311)
T cd07866         124 LLEGINYLHENHILHRDIKAANILIDNQGILKIA--DFGLARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGE  201 (311)
T ss_pred             HHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEC--cCccchhccCCCcccccCCcccccccccceeccCcCChHHhhCC
Confidence            3457889999999999999999999999998888  9998743211                  1345679999987642


Q ss_pred             CCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhcccc---------------------CCC-------CC
Q psy12581         67 PGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRI---------------------TIP-------PG  118 (153)
Q Consensus        67 ~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~---------------------~~~-------~~  118 (153)
                        ...+.++|+||+|++++++++|+.||.+.........+......+                     ..+       ..
T Consensus       202 --~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  279 (311)
T cd07866         202 --RRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLIFKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGK  279 (311)
T ss_pred             --CccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhchhhhhcccccccccCCCCCccHHHHccc
Confidence              234578999999999999999999997765544333322110000                     000       12


Q ss_pred             CCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581        119 ISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus       119 ~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      ....+.+++.+||+.+|++|||+.+++.
T Consensus       280 ~~~~~~~~i~~~l~~~p~~R~t~~ell~  307 (311)
T cd07866         280 LGPEGLDLLSKLLSLDPYKRLTASDALE  307 (311)
T ss_pred             CChhHHHHHHHHcccCcccCcCHHHHhc
Confidence            3467889999999999999999998874

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=99.89  E-value=1e-22  Score=138.17  Aligned_cols=137  Identities=15%  Similarity=0.156  Sum_probs=99.3

Q ss_pred             hhHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccccC-------CcccCCcccCccccccCCCCCCcchhhHH
Q psy12581          6 IVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQR-------GRCYYPAWMSPEALQKKPGDRNLEACDMW   78 (153)
Q Consensus         6 ~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~-------~~~~~~~~~~pe~~~~~~~~~~~~~~dv~   78 (153)
                      .-++.|||++++.|+||.+.||+++.++.+++.  |||.+....       ...++..|++||.+.+.  ...+.++|+|
T Consensus       113 ~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~--dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~--~~~~~~~Dv~  188 (291)
T cd07844         113 LRGLAYCHQRRVLHRDLKPQNLLISERGELKLA--DFGLARAKSVPSKTYSNEVVTLWYRPPDVLLGS--TEYSTSLDMW  188 (291)
T ss_pred             HHHHHHHHhCCeecccCCHHHEEEcCCCCEEEC--ccccccccCCCCccccccccccccCCcHHhhcC--cccCcHHHHH
Confidence            446789999999999999999999999988888  999874321       12356789999987642  1345789999


Q ss_pred             HHHHHHHHHHhCCCCCCCCCc-hhhhHHHHhhc-------------------ccc---------CCCCCCC--HHHHHHH
Q psy12581         79 SFAVLLWELATREVPFADLTP-MEVGMKVALEG-------------------LRI---------TIPPGIS--SHLSKLI  127 (153)
Q Consensus        79 s~g~~~~~~~~g~~p~~~~~~-~~~~~~~~~~~-------------------~~~---------~~~~~~~--~~~~~l~  127 (153)
                      |+|++++++++|..||.+... .+....+....                   ...         ......+  ..+.+++
T Consensus       189 slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  268 (291)
T cd07844         189 GVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSSNPEFKPYSFPFYPPRPLINHAPRLDRIPHGEELA  268 (291)
T ss_pred             HHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhhhccccccccccccCChhHHHhCcCCCCchhHHHHH
Confidence            999999999999999966542 11111111000                   000         0001233  6788999


Q ss_pred             HHHhcCCCCCCCCHHHHHH
Q psy12581        128 RICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus       128 ~~cl~~~p~~Rps~~~~l~  146 (153)
                      .+||+.+|++|||+.++++
T Consensus       269 ~~~L~~~p~~Rps~~e~l~  287 (291)
T cd07844         269 LKFLQYEPKKRISAAEAMK  287 (291)
T ss_pred             HHHhccCcccccCHHHHhc
Confidence            9999999999999998875

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=99.89  E-value=2.1e-22  Score=136.04  Aligned_cols=137  Identities=18%  Similarity=0.184  Sum_probs=102.6

Q ss_pred             hhHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccccC------CcccCCcccCccccccCCCCCCcchhhHHH
Q psy12581          6 IVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQR------GRCYYPAWMSPEALQKKPGDRNLEACDMWS   79 (153)
Q Consensus         6 ~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~------~~~~~~~~~~pe~~~~~~~~~~~~~~dv~s   79 (153)
                      .-++.|||++++.|++|.+.||+++.++.+++.  |||.+....      ...++..|++||.+...  ...+.++|+||
T Consensus       109 ~~~l~~Lh~~~i~H~dl~~~ni~i~~~~~~~l~--d~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~--~~~~~~~Di~s  184 (283)
T cd07830         109 LQGLAHIHKHGFFHRDLKPENLLVSGPEVVKIA--DFGLAREIRSRPPYTDYVSTRWYRAPEILLRS--TSYSSPVDIWA  184 (283)
T ss_pred             HHHHHHHHHCCcccCCCChhhEEEcCCCCEEEe--ecccceeccCCCCcCCCCCcccccCceeeecC--cCcCCccchhh
Confidence            446789999999999999999999999998888  999874332      23467789999987542  23457899999


Q ss_pred             HHHHHHHHHhCCCCCCCCCchhhhHHHHhh-----------------ccccC-----------CCCCCCHHHHHHHHHHh
Q psy12581         80 FAVLLWELATREVPFADLTPMEVGMKVALE-----------------GLRIT-----------IPPGISSHLSKLIRICM  131 (153)
Q Consensus        80 ~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~-----------------~~~~~-----------~~~~~~~~~~~l~~~cl  131 (153)
                      +|++++++++|..||..........+....                 .....           .....+..+.+++.+||
T Consensus       185 ~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl  264 (283)
T cd07830         185 LGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKLGFRFPQFAPTSLHQLIPNASPEAIDLIKDML  264 (283)
T ss_pred             HHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhccccccccccccccHHHHcccCCHHHHHHHHHhc
Confidence            999999999999998766544433222110                 00000           01123578999999999


Q ss_pred             cCCCCCCCCHHHHHH
Q psy12581        132 NEDPGKRPTFDMVLP  146 (153)
Q Consensus       132 ~~~p~~Rps~~~~l~  146 (153)
                      +.+|++||++++++.
T Consensus       265 ~~~p~~Rpt~~ei~~  279 (283)
T cd07830         265 RWDPKKRPTASQALQ  279 (283)
T ss_pred             ccCcccCCCHHHHhh
Confidence            999999999999875

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>KOG0612|consensus

Probab=99.88  E-value=4.2e-23  Score=154.48  Aligned_cols=138  Identities=19%  Similarity=0.229  Sum_probs=117.0

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc--------CCcccCCcccCccccccCCC--CCCcch
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ--------RGRCYYPAWMSPEALQKKPG--DRNLEA   74 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~--------~~~~~~~~~~~pe~~~~~~~--~~~~~~   74 (153)
                      .++|+.-||+.|++|+||+|+|+++|..|++|+.  |||.+..+        ....|||.|.+||++.....  +.+++.
T Consensus       184 iVlAldslH~mgyVHRDiKPDNvLld~~GHikLA--DFGsClkm~~dG~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~e  261 (1317)
T KOG0612|consen  184 IVLALDSLHSMGYVHRDIKPDNVLLDKSGHIKLA--DFGSCLKMDADGTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRE  261 (1317)
T ss_pred             HHHHHHHHHhccceeccCCcceeEecccCcEeec--cchhHHhcCCCCcEEeccccCCCCccCHHHHHhhcCCccccCCc
Confidence            4678888999999999999999999999999999  99998443        34589999999999864322  457899


Q ss_pred             hhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCC--CCCCHHHHHHHHHHhcCCCCCCCC---HHHHH
Q psy12581         75 CDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIP--PGISSHLSKLIRICMNEDPGKRPT---FDMVL  145 (153)
Q Consensus        75 ~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~cl~~~p~~Rps---~~~~l  145 (153)
                      +|.||+|+++|||+.|..||+..+..+.+.+++...-.+.+|  ..+|.+..+++.+.+.. |+.|..   ++++.
T Consensus       262 cDwWSlGV~~YEMlyG~TPFYadslveTY~KIm~hk~~l~FP~~~~VSeeakdLI~~ll~~-~e~RLgrngiedik  336 (1317)
T KOG0612|consen  262 CDWWSLGVFMYEMLYGETPFYADSLVETYGKIMNHKESLSFPDETDVSEEAKDLIEALLCD-REVRLGRNGIEDIK  336 (1317)
T ss_pred             cchhhhHHHHHHHHcCCCcchHHHHHHHHHHHhchhhhcCCCcccccCHHHHHHHHHHhcC-hhhhcccccHHHHH
Confidence            999999999999999999999998888888888765556666  56899999999998774 888887   77664

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=99.88  E-value=1.4e-22  Score=137.97  Aligned_cols=139  Identities=19%  Similarity=0.082  Sum_probs=102.7

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccccCC-------cccCCcccCccccccCCCCCCcchhhH
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQRG-------RCYYPAWMSPEALQKKPGDRNLEACDM   77 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~~-------~~~~~~~~~pe~~~~~~~~~~~~~~dv   77 (153)
                      ..-++.|||++++.|+||.++||+++.++.+++.  |||++.....       ..++..|++||.+.+.  ..++.++|+
T Consensus       111 i~~al~~lH~~~i~H~dl~p~nill~~~~~~~l~--dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~~Dv  186 (298)
T cd07841         111 TLRGLEYLHSNWILHRDLKPNNLLIASDGVLKLA--DFGLARSFGSPNRKMTHQVVTRWYRAPELLFGA--RHYGVGVDM  186 (298)
T ss_pred             HHHHHHHHHhCCeeecCCChhhEEEcCCCCEEEc--cceeeeeccCCCccccccccceeeeCHHHHhCC--CCCCcHHHH
Confidence            3456789999999999999999999999988888  9998844321       2345679999987542  234578999


Q ss_pred             HHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhcc---------------------ccC-----CCCCCCHHHHHHHHHHh
Q psy12581         78 WSFAVLLWELATREVPFADLTPMEVGMKVALEGL---------------------RIT-----IPPGISSHLSKLIRICM  131 (153)
Q Consensus        78 ~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~---------------------~~~-----~~~~~~~~~~~l~~~cl  131 (153)
                      |++|++++++++|.++|.+........++...-.                     ...     .....+..+.+++.+||
T Consensus       187 ~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l  266 (298)
T cd07841         187 WSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENWPGVTSLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLL  266 (298)
T ss_pred             HHHHHHHHHHHcCCccccCCccHHHHHHHHHHcCCCchhhhhhcccccccccccccCCcchhhhcccccHHHHHHHHHHh
Confidence            9999999999999888766554433322211100                     000     01234678899999999


Q ss_pred             cCCCCCCCCHHHHHHH
Q psy12581        132 NEDPGKRPTFDMVLPI  147 (153)
Q Consensus       132 ~~~p~~Rps~~~~l~~  147 (153)
                      ..+|++|||+.++++.
T Consensus       267 ~~~P~~R~s~~e~l~~  282 (298)
T cd07841         267 TLNPNKRITARQALEH  282 (298)
T ss_pred             cCCcccCcCHHHHhhC
Confidence            9999999999999863

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=99.88  E-value=1.3e-22  Score=137.05  Aligned_cols=138  Identities=12%  Similarity=0.079  Sum_probs=103.5

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc-------CCcccCCcccCccccccCCCCCCcchhhH
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ-------RGRCYYPAWMSPEALQKKPGDRNLEACDM   77 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~-------~~~~~~~~~~~pe~~~~~~~~~~~~~~dv   77 (153)
                      ..-++.|||++++.|+||.+.||+++.++.+++.  |||.+...       ....++..|++||.+.+..  ..+.++|+
T Consensus       109 i~~~l~~lH~~~i~h~dl~p~ni~~~~~~~~~l~--d~g~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~--~~~~~~Dv  184 (284)
T cd07836         109 LLKGIAFCHENRVLHRDLKPQNLLINKRGELKLA--DFGLARAFGIPVNTFSNEVVTLWYRAPDVLLGSR--TYSTSIDI  184 (284)
T ss_pred             HHHHHHHHHHCCeeeCCCCHHHEEECCCCcEEEe--ecchhhhhcCCccccccccccccccChHHhcCCC--CCCcHHHH
Confidence            3456789999999999999999999999988888  99987432       1234577899999876432  34578999


Q ss_pred             HHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhc----------------cccCC-----------CCCCCHHHHHHHHHH
Q psy12581         78 WSFAVLLWELATREVPFADLTPMEVGMKVALEG----------------LRITI-----------PPGISSHLSKLIRIC  130 (153)
Q Consensus        78 ~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~----------------~~~~~-----------~~~~~~~~~~l~~~c  130 (153)
                      |++|++++++++|+.||.+....+....+....                .....           ....+..+.+++.+|
T Consensus       185 ~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  264 (284)
T cd07836         185 WSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLPEYKPTFPRYPPQDLQQLFPHADPLGIDLLHRL  264 (284)
T ss_pred             HHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHhcCchhcccccCCChHHHHHHhhhcCcHHHHHHHHH
Confidence            999999999999999998765544333222110                00000           123467788999999


Q ss_pred             hcCCCCCCCCHHHHHH
Q psy12581        131 MNEDPGKRPTFDMVLP  146 (153)
Q Consensus       131 l~~~p~~Rps~~~~l~  146 (153)
                      ++.+|++||++.++++
T Consensus       265 l~~~p~~R~~~~~~l~  280 (284)
T cd07836         265 LQLNPELRISAHDALQ  280 (284)
T ss_pred             hcCCcccCCCHHHHhc
Confidence            9999999999999875

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>PLN00181 protein SPA1-RELATED; Provisional

Probab=99.88  E-value=6.5e-23  Score=155.28  Aligned_cols=133  Identities=15%  Similarity=0.089  Sum_probs=93.6

Q ss_pred             hhHHhhhhcCCCCCCCeeeeeeeecc-------------------ccchhhcccccccccccC-----------------
Q psy12581          6 IVYSFYLNSKKSKTSNAFLFCCQIDE-------------------DLTARINMADAQFSFQQR-----------------   49 (153)
Q Consensus         6 ~~~~~~lh~~~i~~~ni~~~~~~~~~-------------------~~~~kl~~~d~g~~~~~~-----------------   49 (153)
                      .-++.|||+++|.|+||++.||+++.                   ++.+|+.  |||++....                 
T Consensus        90 ~~al~~lH~~gIvHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~--DfG~a~~~~~~~~~~~~~~~~~~~~~  167 (793)
T PLN00181         90 VEIVNAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSR--EIGSSRREEILSERRIEKLEEVKKQP  167 (793)
T ss_pred             HHHHHHHHhCCeeeccCCchhEEEcccCcEEEeeccccCcccccccCccccc--ccccccccccccccchhhhhccccCC
Confidence            44678999999999999999999954                   3334444  888764211                 


Q ss_pred             ------CcccCCcccCccccccCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCCCCCCHHH
Q psy12581         50 ------GRCYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHL  123 (153)
Q Consensus        50 ------~~~~~~~~~~pe~~~~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  123 (153)
                            ...+|+.|++||.+.+.+   ++.++|+||+|+++||+++|..|+.....  ..... .....++.........
T Consensus       168 ~~~~~~~~~gt~~Y~APE~~~~~~---~~~~sDVwSlGviL~ELl~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~  241 (793)
T PLN00181        168 FPMKQILAMEMSWYTSPEEDNGSS---SNCASDVYRLGVLLFELFCPVSSREEKSR--TMSSL-RHRVLPPQILLNWPKE  241 (793)
T ss_pred             CcccccccCCCcceEChhhhccCC---CCchhhhhhHHHHHHHHhhCCCchhhHHH--HHHHH-HHhhcChhhhhcCHHH
Confidence                  124678899999987643   45899999999999999998887643221  11111 1111111111234566


Q ss_pred             HHHHHHHhcCCCCCCCCHHHHHH
Q psy12581        124 SKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus       124 ~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      ..++.+||+.+|.+||++.++++
T Consensus       242 ~~~~~~~L~~~P~~Rps~~eil~  264 (793)
T PLN00181        242 ASFCLWLLHPEPSCRPSMSELLQ  264 (793)
T ss_pred             HHHHHHhCCCChhhCcChHHHhh
Confidence            78899999999999999999975

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=99.88  E-value=6.5e-23  Score=136.90  Aligned_cols=135  Identities=21%  Similarity=0.208  Sum_probs=106.0

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc------CCcccCCcccCccccccCCCCCCcchhhHH
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ------RGRCYYPAWMSPEALQKKPGDRNLEACDMW   78 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~------~~~~~~~~~~~pe~~~~~~~~~~~~~~dv~   78 (153)
                      .+-++.|||..++.|+|+.+.||+++.++.+++.  |||.+...      ....++..|++||.+.+..   .+.++|+|
T Consensus       109 i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~l~--d~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~---~~~~~Di~  183 (258)
T cd05578         109 IVLALEYLHSKGIIHRDIKPDNILLDEQGHVHIT--DFNIATKVTPDTLTTSTSGTPGYMAPEVLCRQG---YSVAVDWW  183 (258)
T ss_pred             HHHHHHHHHhCCeeccCCCHHHeEEcCCCCEEEe--ecccccccCCCccccccCCChhhcCHHHHcccC---CCCcccch
Confidence            3456789999999999999999999999988888  99987432      2245677899999987643   45789999


Q ss_pred             HHHHHHHHHHhCCCCCCCCCc--hhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCH--HHHH
Q psy12581         79 SFAVLLWELATREVPFADLTP--MEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTF--DMVL  145 (153)
Q Consensus        79 s~g~~~~~~~~g~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~--~~~l  145 (153)
                      ++|++++++++|..||.....  ........ .......|...+..+.+++.+||..+|.+||++  ++++
T Consensus       184 slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~  253 (258)
T cd05578         184 SLGVTAYECLRGKRPYRGHSRTIRDQIRAKQ-ETADVLYPATWSTEAIDAINKLLERDPQKRLGDNLKDLK  253 (258)
T ss_pred             hhHHHHHHHHhCCCCCCCCCccHHHHHHHHh-ccccccCcccCcHHHHHHHHHHccCChhHcCCccHHHHh
Confidence            999999999999999987653  22211211 113445567788999999999999999999999  6554

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=99.88  E-value=9.2e-23  Score=138.25  Aligned_cols=139  Identities=22%  Similarity=0.254  Sum_probs=105.4

Q ss_pred             hhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc--------CCcccCCcccCccccccCCCCCCcchhhH
Q psy12581          6 IVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ--------RGRCYYPAWMSPEALQKKPGDRNLEACDM   77 (153)
Q Consensus         6 ~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~--------~~~~~~~~~~~pe~~~~~~~~~~~~~~dv   77 (153)
                      .-++.|||+.++.|+||.+.||+++.++.+++.  |||++...        ....++..|++||.+.+... ..+.++|+
T Consensus       115 ~~~l~~lH~~~~~H~dl~p~nil~~~~~~~~l~--dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~~~Dv  191 (288)
T cd05583         115 VLALDHLHQLGIIYRDIKLENILLDSEGHVVLT--DFGLSKEFLAEEEERAYSFCGTIEYMAPEVIRGGSG-GHDKAVDW  191 (288)
T ss_pred             HHHHHHHHHCCeeccCCCHHHeEECCCCCEEEE--ECccccccccccccccccccCCccccCHHHhcCCCC-CCcchhhh
Confidence            345789999999999999999999999988888  99987432        12246788999998765321 24578999


Q ss_pred             HHHHHHHHHHHhCCCCCCCCCch----hhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHh
Q psy12581         78 WSFAVLLWELATREVPFADLTPM----EVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILD  149 (153)
Q Consensus        78 ~s~g~~~~~~~~g~~p~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~  149 (153)
                      |++|++++++++|..||......    .......  ....+.+...+..+.+++.+||+.+|++|||+.++.+.|.
T Consensus       192 ~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~  265 (288)
T cd05583         192 WSLGVLTFELLTGASPFTVDGEQNSQSEISRRIL--KSKPPFPKTMSAEARDFIQKLLEKDPKKRLGANGADEIKN  265 (288)
T ss_pred             HHHHHHHHHHHhCCCCcccCcccchHHHHHHHHH--ccCCCCCcccCHHHHHHHHHHhcCCHhhccCcchHHHHhc
Confidence            99999999999999998643221    1111111  1233456668889999999999999999999887776654

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=99.88  E-value=1.1e-22  Score=141.27  Aligned_cols=138  Identities=17%  Similarity=0.113  Sum_probs=103.3

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccccC----CcccCCcccCccccccCCCCCCcchhhHHHH
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQR----GRCYYPAWMSPEALQKKPGDRNLEACDMWSF   80 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~----~~~~~~~~~~pe~~~~~~~~~~~~~~dv~s~   80 (153)
                      ..-++.|||++++.|+||.+.||+++.++.+++.  |||++....    ...++..|++||.+.+.  ...+.++|+||+
T Consensus       129 i~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kl~--dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~~Dvwsl  204 (345)
T cd07877         129 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKIL--DFGLARHTDDEMTGYVATRWYRAPEIMLNW--MHYNQTVDIWSV  204 (345)
T ss_pred             HHHHHHHHHHCCeeecCCChHHEEEcCCCCEEEe--cccccccccccccccccCCCccCHHHHhCc--cCCCchhhHHHH
Confidence            3457899999999999999999999999988888  999875432    23567889999987642  234578999999


Q ss_pred             HHHHHHHHhCCCCCCCCCchhhhHHHHhhc------------------------cccC-----CCCCCCHHHHHHHHHHh
Q psy12581         81 AVLLWELATREVPFADLTPMEVGMKVALEG------------------------LRIT-----IPPGISSHLSKLIRICM  131 (153)
Q Consensus        81 g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~------------------------~~~~-----~~~~~~~~~~~l~~~cl  131 (153)
                      |++++++++|..||...........+....                        ..+.     .....++.+.+++.+|+
T Consensus       205 G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L  284 (345)
T cd07877         205 GCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKML  284 (345)
T ss_pred             HHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHc
Confidence            999999999999997654433222211100                        0000     01135778999999999


Q ss_pred             cCCCCCCCCHHHHHH
Q psy12581        132 NEDPGKRPTFDMVLP  146 (153)
Q Consensus       132 ~~~p~~Rps~~~~l~  146 (153)
                      +.+|++||++.+++.
T Consensus       285 ~~dp~~R~t~~e~l~  299 (345)
T cd07877         285 VLDSDKRITAAQALA  299 (345)
T ss_pred             CCChhhcCCHHHHhc
Confidence            999999999999874

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=99.88  E-value=1.2e-22  Score=136.96  Aligned_cols=135  Identities=21%  Similarity=0.277  Sum_probs=107.4

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccccCC---------------------------cccCCcc
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQRG---------------------------RCYYPAW   57 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~~---------------------------~~~~~~~   57 (153)
                      ..-++.|||+.++.|+||.+.||+++.++.+++.  |||.+.....                           ..++..|
T Consensus       111 l~~~l~~Lh~~~~~H~dl~~~ni~i~~~~~~~l~--df~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  188 (280)
T cd05581         111 ILLALEYLHSKGIIHRDLKPENILLDKDMHIKIT--DFGTAKVLDPNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEY  188 (280)
T ss_pred             HHHHHHHHHHCCeeecCCCHHHeEECCCCCEEec--CCccccccCCccccccCCCCCccccccccccccccccccCCccc
Confidence            3456789999999999999999999999988888  9998743221                           1346789


Q ss_pred             cCccccccCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCC
Q psy12581         58 MSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGK  137 (153)
Q Consensus        58 ~~pe~~~~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~  137 (153)
                      ++||.....   ..+.++|+|++|++++++++|..||.............  ......+...++.+.+++.+||+.+|++
T Consensus       189 ~~Pe~~~~~---~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~li~~~l~~~p~~  263 (280)
T cd05581         189 VSPELLNEK---PAGKSSDLWALGCIIYQMLTGKPPFRGSNEYLTFQKIL--KLEYSFPPNFPPDAKDLIEKLLVLDPQD  263 (280)
T ss_pred             cCHHHhCCC---CCChhhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHH--hcCCCCCCccCHHHHHHHHHHhcCCHhh
Confidence            999987653   34578999999999999999999998776544433333  2244556778899999999999999999


Q ss_pred             CCCH----HHHHH
Q psy12581        138 RPTF----DMVLP  146 (153)
Q Consensus       138 Rps~----~~~l~  146 (153)
                      ||++    +++++
T Consensus       264 R~~~~~~~~~ll~  276 (280)
T cd05581         264 RLGVNEGYDELKA  276 (280)
T ss_pred             CCCcccCHHHHhc
Confidence            9999    77764

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=99.88  E-value=1.4e-22  Score=138.43  Aligned_cols=138  Identities=19%  Similarity=0.162  Sum_probs=100.7

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccccC-----------CcccCCcccCccccccCCCCCCcc
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQR-----------GRCYYPAWMSPEALQKKPGDRNLE   73 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~-----------~~~~~~~~~~pe~~~~~~~~~~~~   73 (153)
                      ..-++.|||++++.|+||.+.||+++.++.+++.  |||.+....           ...++..|++||.+.+..  ..+.
T Consensus       128 i~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~--dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~--~~~~  203 (310)
T cd07865         128 LLNGLYYIHRNKILHRDMKAANILITKDGILKLA--DFGLARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGER--DYGP  203 (310)
T ss_pred             HHHHHHHHHHCCeeccCCCHHHEEECCCCcEEEC--cCCCcccccCCcccCCCCccCcccCccccCcHHhcCCc--ccCc
Confidence            3456789999999999999999999999988888  999874321           123566799999876432  2457


Q ss_pred             hhhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhh--ccc---------------cCC-------------CCCCCHHH
Q psy12581         74 ACDMWSFAVLLWELATREVPFADLTPMEVGMKVALE--GLR---------------ITI-------------PPGISSHL  123 (153)
Q Consensus        74 ~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~--~~~---------------~~~-------------~~~~~~~~  123 (153)
                      ++|+||+|++++++++|..||.+.........+..-  ...               ...             +...+..+
T Consensus       204 ~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  283 (310)
T cd07865         204 PIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSITPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHA  283 (310)
T ss_pred             hhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhcccccchhhhhhccCCCccchhhHHhcccccCCHHH
Confidence            899999999999999999998765543322111110  000               000             11134677


Q ss_pred             HHHHHHHhcCCCCCCCCHHHHHH
Q psy12581        124 SKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus       124 ~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      .+++.+||..+|++|||++++++
T Consensus       284 ~dli~~~l~~~P~~R~t~~e~l~  306 (310)
T cd07865         284 LDLIDKLLVLDPAKRIDADTALN  306 (310)
T ss_pred             HHHHHHHhcCChhhccCHHHHhc
Confidence            89999999999999999999875

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=99.88  E-value=3.1e-22  Score=135.08  Aligned_cols=138  Identities=16%  Similarity=0.126  Sum_probs=102.7

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccccC-------CcccCCcccCccccccCCCCCCcchhhH
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQR-------GRCYYPAWMSPEALQKKPGDRNLEACDM   77 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~-------~~~~~~~~~~pe~~~~~~~~~~~~~~dv   77 (153)
                      ..-++.|||++++.|+||.+.||+++.++.+++.  |||.+....       ...++..|++||.+...  ...+.++|+
T Consensus       107 i~~~l~~LH~~~i~H~~l~~~ni~~~~~~~~~l~--d~g~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~--~~~~~~~Dv  182 (282)
T cd07829         107 LLRGLAYCHSHRILHRDLKPQNILINRDGVLKLA--DFGLARAFGIPLRTYTHEVVTLWYRAPEILLGS--KHYSTAVDI  182 (282)
T ss_pred             HHHHHHHHHHCCcccCCCChheEEEcCCCCEEEe--cCCcccccCCCccccCccccCcCcCChHHhcCC--cCCCccccH
Confidence            3456789999999999999999999999998888  999874321       22346679999988653  134578999


Q ss_pred             HHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhc-------------------ccc--------CCCCCCCHHHHHHHHHH
Q psy12581         78 WSFAVLLWELATREVPFADLTPMEVGMKVALEG-------------------LRI--------TIPPGISSHLSKLIRIC  130 (153)
Q Consensus        78 ~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~-------------------~~~--------~~~~~~~~~~~~l~~~c  130 (153)
                      |++|++++++++|..||.+.........+....                   ...        ......+..+.+++.+|
T Consensus       183 ~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  262 (282)
T cd07829         183 WSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLPDYKPTFPKFPPKDLEKVLPRLDPEGIDLLSKM  262 (282)
T ss_pred             HHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhcccccccccccccCccchHHhcccccHHHHHHHHHh
Confidence            999999999999999997765443332221100                   000        00112367899999999


Q ss_pred             hcCCCCCCCCHHHHHH
Q psy12581        131 MNEDPGKRPTFDMVLP  146 (153)
Q Consensus       131 l~~~p~~Rps~~~~l~  146 (153)
                      |..+|++||++++++.
T Consensus       263 l~~~P~~Rp~~~~~l~  278 (282)
T cd07829         263 LQYNPAKRISAKEALK  278 (282)
T ss_pred             hccCcccCCCHHHHhh
Confidence            9999999999999875

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=99.88  E-value=1.8e-22  Score=139.30  Aligned_cols=138  Identities=22%  Similarity=0.292  Sum_probs=99.2

Q ss_pred             hhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc--------------CCcccCCcccCccccccCCCCCC
Q psy12581          6 IVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ--------------RGRCYYPAWMSPEALQKKPGDRN   71 (153)
Q Consensus         6 ~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~--------------~~~~~~~~~~~pe~~~~~~~~~~   71 (153)
                      .-++.|||++++.|+||++.||+++.++.+++.  ||+.....              ....++..|++||.+.+.. ..+
T Consensus       111 ~~aL~~lH~~~ivHrDlkp~Nill~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~  187 (328)
T cd08226         111 LRGLNYLHQNGYIHRNIKASHILISGDGLVSLS--GLSHLYSLVRNGQKAKVVYDFPQFSTSVLPWLSPELLRQDL-YGY  187 (328)
T ss_pred             HHHHHHHHhCCeecCCCCHHHEEEeCCCcEEEe--chHHHhhhhccCccccccccccccccCccCccChhhhcCCC-CCC
Confidence            456899999999999999999999999888887  87643111              0112345699999986532 235


Q ss_pred             cchhhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhcc----------------------------------------
Q psy12581         72 LEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGL----------------------------------------  111 (153)
Q Consensus        72 ~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~----------------------------------------  111 (153)
                      +.++|+||+|++++++++|+.||.................                                        
T Consensus       188 ~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (328)
T cd08226         188 NVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPYSPLDITTFPCEESRMKNSQSGVDSGIGESVVAAGMTQTM  267 (328)
T ss_pred             CchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCCCccccccchhhhhhccchhhhhcccccchhcccccccc
Confidence            6889999999999999999999976543332221111000                                        


Q ss_pred             -----ccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581        112 -----RITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus       112 -----~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                           ..+.+..++..+.+++++||+.||++|||+.++++
T Consensus       268 ~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~  307 (328)
T cd08226         268 TSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLS  307 (328)
T ss_pred             ccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhh
Confidence                 00112234567899999999999999999999974

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>KOG1094|consensus

Probab=99.88  E-value=9.7e-23  Score=144.25  Aligned_cols=145  Identities=24%  Similarity=0.384  Sum_probs=116.4

Q ss_pred             ccchhhHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccccC---------CcccCCcccCccccccCCCCCCc
Q psy12581          2 KKKKIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQR---------GRCYYPAWMSPEALQKKPGDRNL   72 (153)
Q Consensus         2 ~~~~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~---------~~~~~~~~~~pe~~~~~~~~~~~   72 (153)
                      |-..+-...||.+.++.|+++..+||++|.++++||.  |||++...-         ...-...||++|.+..   ++++
T Consensus       643 ~tqiasgmaYLes~nfVHrd~a~rNcLv~~e~~iKia--dfgmsR~lysg~yy~vqgr~vlpiRwmawEsill---gkFt  717 (807)
T KOG1094|consen  643 CTQIASGMAYLESLNFVHRDLATRNCLVDGEFTIKIA--DFGMSRNLYSGDYYRVQGRAVLPIRWMAWESILL---GKFT  717 (807)
T ss_pred             HHHHHHHHHHHHhhchhhccccccceeecCcccEEec--CcccccccccCCceeeecceeeeeeehhHHHHHh---cccc
Confidence            4445567899999999999999999999999999999  999985331         2244578999998875   4677


Q ss_pred             chhhHHHHHHHHHHHHh--CCCCCCCCCchhhhHHHH---hhc---cccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHH
Q psy12581         73 EACDMWSFAVLLWELAT--REVPFADLTPMEVGMKVA---LEG---LRITIPPGISSHLSKLIRICMNEDPGKRPTFDMV  144 (153)
Q Consensus        73 ~~~dv~s~g~~~~~~~~--g~~p~~~~~~~~~~~~~~---~~~---~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~  144 (153)
                      .++|+|+||+++||+++  ...||....++.......   ..+   .-+..|..++..+.+++.+||..+..+||+++++
T Consensus       718 taSDvWafgvTlwE~~~~C~e~Py~~lt~e~vven~~~~~~~~~~~~~l~~P~~cp~~lyelml~Cw~~es~~RPsFe~l  797 (807)
T KOG1094|consen  718 TASDVWAFGVTLWEVFMLCREQPYSQLTDEQVVENAGEFFRDQGRQVVLSRPPACPQGLYELMLRCWRRESEQRPSFEQL  797 (807)
T ss_pred             chhhhhhhHHHHHHHHHHHhhCchhhhhHHHHHHhhhhhcCCCCcceeccCCCcCcHHHHHHHHHHhchhhhcCCCHHHH
Confidence            99999999999999865  678998877665543321   111   1334577789999999999999999999999999


Q ss_pred             HHHHhhh
Q psy12581        145 LPILDKM  151 (153)
Q Consensus       145 l~~L~~~  151 (153)
                      ...|++.
T Consensus       798 h~~lq~~  804 (807)
T KOG1094|consen  798 HLFLQED  804 (807)
T ss_pred             HHHHHHh
Confidence            9988764

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=99.88  E-value=4.8e-22  Score=132.87  Aligned_cols=134  Identities=22%  Similarity=0.343  Sum_probs=103.6

Q ss_pred             hhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc-------CCcccCCcccCccccccCCCCCCcchhhHH
Q psy12581          6 IVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ-------RGRCYYPAWMSPEALQKKPGDRNLEACDMW   78 (153)
Q Consensus         6 ~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~-------~~~~~~~~~~~pe~~~~~~~~~~~~~~dv~   78 (153)
                      +-++.|||++++.|+|+.+.||+++. +.+++.  |||.+...       ....+++.|++||...+.   ..+.++|+|
T Consensus       116 ~~~l~~lH~~~i~h~~l~~~nili~~-~~~~l~--d~g~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~---~~~~~~Dv~  189 (260)
T cd08222         116 LLGVHYMHQRRILHRDLKAKNIFLKN-NLLKIG--DFGVSRLLMGSCDLATTFTGTPYYMSPEALKHQ---GYDSKSDIW  189 (260)
T ss_pred             HHHHHHHHHcCccccCCChhheEeec-CCEeec--ccCceeecCCCcccccCCCCCcCccCHHHHccC---CCCchhhHH
Confidence            34678999999999999999999975 456666  99987332       123567789999987653   344789999


Q ss_pred             HHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581         79 SFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus        79 s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      ++|++++++++|..||............. .+..+..+...+..+.+++.+||..+|++||++.++++
T Consensus       190 slG~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~  256 (260)
T cd08222         190 SLGCILYEMCCLAHAFEGQNFLSVVLRIV-EGPTPSLPETYSRQLNSIMQSMLNKDPSLRPSAAEILR  256 (260)
T ss_pred             HHHHHHHHHHhCCCCCCCccHHHHHHHHH-cCCCCCCcchhcHHHHHHHHHHhcCChhhCcCHHHHhh
Confidence            99999999999999997655444333322 23344455667889999999999999999999999875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=99.88  E-value=4.9e-22  Score=137.13  Aligned_cols=138  Identities=16%  Similarity=0.103  Sum_probs=102.2

Q ss_pred             hhHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccccC----CcccCCcccCccccccCCCCCCcchhhHHHHH
Q psy12581          6 IVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQR----GRCYYPAWMSPEALQKKPGDRNLEACDMWSFA   81 (153)
Q Consensus         6 ~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~----~~~~~~~~~~pe~~~~~~~~~~~~~~dv~s~g   81 (153)
                      .-++.|||++++.|+||.+.||+++.++.+++.  |||.+....    ...++..|++||.+.+.  ...+.++|+|++|
T Consensus       118 ~~aL~~LH~~~iiH~dl~p~Nili~~~~~~~l~--dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~~Dv~slG  193 (328)
T cd07856         118 LRGLKYVHSAGVVHRDLKPSNILINENCDLKIC--DFGLARIQDPQMTGYVSTRYYRAPEIMLTW--QKYDVEVDIWSAG  193 (328)
T ss_pred             HHHHHHHHhCCcccCCCCHHHEeECCCCCEEeC--ccccccccCCCcCCCcccccccCceeeecc--CCcCcHHHHHHHH
Confidence            345789999999999999999999999988888  999875332    23467789999987542  2345889999999


Q ss_pred             HHHHHHHhCCCCCCCCCchhhhHHHHh-----------------------h-ccccCC-----CCCCCHHHHHHHHHHhc
Q psy12581         82 VLLWELATREVPFADLTPMEVGMKVAL-----------------------E-GLRITI-----PPGISSHLSKLIRICMN  132 (153)
Q Consensus        82 ~~~~~~~~g~~p~~~~~~~~~~~~~~~-----------------------~-~~~~~~-----~~~~~~~~~~l~~~cl~  132 (153)
                      ++++++++|+.||...........+..                       . ......     ....+..+.+++++||+
T Consensus       194 ~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~  273 (328)
T cd07856         194 CIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTICSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLV  273 (328)
T ss_pred             HHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhccchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcC
Confidence            999999999999976543221111000                       0 000011     12356889999999999


Q ss_pred             CCCCCCCCHHHHHHH
Q psy12581        133 EDPGKRPTFDMVLPI  147 (153)
Q Consensus       133 ~~p~~Rps~~~~l~~  147 (153)
                      .+|++||++++++..
T Consensus       274 ~~P~~R~t~~ell~~  288 (328)
T cd07856         274 FDPQKRISAAEALAH  288 (328)
T ss_pred             CChhhCCCHHHHhcC
Confidence            999999999998753

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=99.88  E-value=4.5e-22  Score=131.11  Aligned_cols=136  Identities=29%  Similarity=0.299  Sum_probs=105.9

Q ss_pred             hhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc------CCcccCCcccCccccccCCCCCCcchhhHHH
Q psy12581          6 IVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ------RGRCYYPAWMSPEALQKKPGDRNLEACDMWS   79 (153)
Q Consensus         6 ~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~------~~~~~~~~~~~pe~~~~~~~~~~~~~~dv~s   79 (153)
                      .-+..|||.+++.|+||.+.||+++.++.+++.  |||.+...      ....++..|++||.....   ..+.++|+|+
T Consensus        97 ~~~l~~lh~~~i~h~~i~~~ni~~~~~~~~~l~--d~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~---~~~~~~Di~s  171 (244)
T smart00220       97 LSALEYLHSNGIIHRDLKPENILLDEDGHVKLA--DFGLARQLDPGGLLTTFVGTPEYMAPEVLLGK---GYGKAVDVWS  171 (244)
T ss_pred             HHHHHHHHHcCeecCCcCHHHeEECCCCcEEEc--cccceeeeccccccccccCCcCCCCHHHHccC---CCCchhhHHH
Confidence            446789999999999999999999999888888  99988433      234677889999988743   3457999999


Q ss_pred             HHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCCCC--CCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581         80 FAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPG--ISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus        80 ~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      +|++++++++|..||.....................+..  .+..+.+++.+||..+|++||++.++++
T Consensus       172 lG~~l~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~~~  240 (244)
T smart00220      172 LGVILYELLTGKPPFPGDDQLLELFKKIGKPKPPFPPPEWKISPEAKDLIRKLLVKDPEKRLTAEEALQ  240 (244)
T ss_pred             HHHHHHHHHhCCCCCCCCCcHHHHHHHHhccCCCCccccccCCHHHHHHHHHHccCCchhccCHHHHhh
Confidence            999999999999999774433333333333222222222  7789999999999999999999999886

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=99.88  E-value=3.2e-22  Score=138.81  Aligned_cols=137  Identities=15%  Similarity=0.135  Sum_probs=103.7

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccccC----CcccCCcccCccccccCCCCCCcchhhHHHH
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQR----GRCYYPAWMSPEALQKKPGDRNLEACDMWSF   80 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~----~~~~~~~~~~pe~~~~~~~~~~~~~~dv~s~   80 (153)
                      ..-++.|||++++.|+||.+.||+++.++.+++.  |||++....    ...+++.|++||.+.+.  ...+.++|+|++
T Consensus       127 i~~al~~LH~~gi~H~dlkp~Nill~~~~~~kl~--dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~~Di~sl  202 (343)
T cd07880         127 MLKGLKYIHAAGIIHRDLKPGNLAVNEDCELKIL--DFGLARQTDSEMTGYVVTRWYRAPEVILNW--MHYTQTVDIWSV  202 (343)
T ss_pred             HHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEe--ecccccccccCccccccCCcccCHHHHhCC--CCCCcHHHHHHH
Confidence            3456899999999999999999999999988887  999885432    23567889999988642  235578999999


Q ss_pred             HHHHHHHHhCCCCCCCCCchhhhHHHHhhccc-----------------------------cCCCCCCCHHHHHHHHHHh
Q psy12581         81 AVLLWELATREVPFADLTPMEVGMKVALEGLR-----------------------------ITIPPGISSHLSKLIRICM  131 (153)
Q Consensus        81 g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~-----------------------------~~~~~~~~~~~~~l~~~cl  131 (153)
                      |++++++++|..||.+.........+......                             .......+..+.+++.+|+
T Consensus       203 G~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l  282 (343)
T cd07880         203 GCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKEFVQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKML  282 (343)
T ss_pred             HHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHc
Confidence            99999999999999765543332222111000                             0011346778999999999


Q ss_pred             cCCCCCCCCHHHHH
Q psy12581        132 NEDPGKRPTFDMVL  145 (153)
Q Consensus       132 ~~~p~~Rps~~~~l  145 (153)
                      +.||++|||+.+++
T Consensus       283 ~~dP~~R~t~~~~l  296 (343)
T cd07880         283 VLDAESRITAAEAL  296 (343)
T ss_pred             CCChhhCCCHHHHh
Confidence            99999999999987

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=99.87  E-value=2.4e-22  Score=136.33  Aligned_cols=139  Identities=19%  Similarity=0.206  Sum_probs=103.8

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccccC--------CcccCCcccCccccccCCCCCCcchhh
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQR--------GRCYYPAWMSPEALQKKPGDRNLEACD   76 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~--------~~~~~~~~~~pe~~~~~~~~~~~~~~d   76 (153)
                      ..-++.|||++++.|+||.+.||+++.++.+++.  |||++....        ...++..|++||.+.... ...+.++|
T Consensus       114 i~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~--dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~~~D  190 (290)
T cd05613         114 IVLALEHLHKLGIIYRDIKLENILLDSNGHVVLT--DFGLSKEFHEDEVERAYSFCGTIEYMAPDIVRGGD-GGHDKAVD  190 (290)
T ss_pred             HHHHHHHHHhCCeeccCCCHHHeEECCCCCEEEe--eCccceecccccccccccccCCcccCChhhccCCC-CCCCcccc
Confidence            4556799999999999999999999999988888  999874321        234678899999986422 12457899


Q ss_pred             HHHHHHHHHHHHhCCCCCCCCCchhhhHHHHh--hccccCCCCCCCHHHHHHHHHHhcCCCCCCC-----CHHHHHH
Q psy12581         77 MWSFAVLLWELATREVPFADLTPMEVGMKVAL--EGLRITIPPGISSHLSKLIRICMNEDPGKRP-----TFDMVLP  146 (153)
Q Consensus        77 v~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----s~~~~l~  146 (153)
                      +|++|++++++++|..||...........+..  .....+.+...+..+.+++.+||+.+|++||     +++++++
T Consensus       191 v~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~  267 (290)
T cd05613         191 WWSMGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKK  267 (290)
T ss_pred             HHHHHHHHHHHhcCCCCCCcCCccccHHHHHHHhhccCCCCCccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHc
Confidence            99999999999999999864332221111111  1123345667889999999999999999997     6676654

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>KOG0986|consensus

Probab=99.87  E-value=9.4e-23  Score=140.59  Aligned_cols=129  Identities=22%  Similarity=0.235  Sum_probs=104.0

Q ss_pred             hhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc------CCcccCCcccCccccccCCCCCCcchhhHHH
Q psy12581          6 IVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ------RGRCYYPAWMSPEALQKKPGDRNLEACDMWS   79 (153)
Q Consensus         6 ~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~------~~~~~~~~~~~pe~~~~~~~~~~~~~~dv~s   79 (153)
                      ...+++||+++|.-+|+++.||++|+.|+++|+  |+|++...      ..+.||.+|||||++....   ++-..|.|+
T Consensus       297 ~cGLehlH~~~iVYRDLKPeNILLDd~GhvRIS--DLGLAvei~~g~~~~~rvGT~GYMAPEvl~ne~---Y~~s~Dwf~  371 (591)
T KOG0986|consen  297 ICGLEHLHRRRIVYRDLKPENILLDDHGHVRIS--DLGLAVEIPEGKPIRGRVGTVGYMAPEVLQNEV---YDFSPDWFS  371 (591)
T ss_pred             HhhHHHHHhcceeeccCChhheeeccCCCeEee--ccceEEecCCCCccccccCcccccCHHHHcCCc---ccCCccHHH
Confidence            446789999999999999999999999999999  99999543      3458999999999998764   446789999


Q ss_pred             HHHHHHHHHhCCCCCCCCCch----hhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCH
Q psy12581         80 FAVLLWELATREVPFADLTPM----EVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTF  141 (153)
Q Consensus        80 ~g~~~~~~~~g~~p~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~  141 (153)
                      +||++|+|+.|+.||......    +..+.+...  ...++..+++++.++.+.+|+.||++|...
T Consensus       372 lGCllYemi~G~sPFr~~KeKvk~eEvdrr~~~~--~~ey~~kFS~eakslc~~LL~Kdp~~RLGc  435 (591)
T KOG0986|consen  372 LGCLLYEMIAGHSPFRQRKEKVKREEVDRRTLED--PEEYSDKFSEEAKSLCEGLLTKDPEKRLGC  435 (591)
T ss_pred             HHhHHHHHHcccCchhhhhhhhhHHHHHHHHhcc--hhhcccccCHHHHHHHHHHHccCHHHhccC
Confidence            999999999999999654322    222223222  344578899999999999999999999753

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=99.87  E-value=2.3e-22  Score=132.97  Aligned_cols=125  Identities=18%  Similarity=0.165  Sum_probs=96.6

Q ss_pred             hhHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccccC----CcccCCcccCccccccCCCCCCcchhhHHHHH
Q psy12581          6 IVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQR----GRCYYPAWMSPEALQKKPGDRNLEACDMWSFA   81 (153)
Q Consensus         6 ~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~----~~~~~~~~~~pe~~~~~~~~~~~~~~dv~s~g   81 (153)
                      .-++.|||.+++.|+||.+.||+++.++.+++.  |||.+....    ...++..|++||...+.   ..+.++|+||+|
T Consensus        95 ~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~l~--df~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~DvwslG  169 (237)
T cd05576          95 VVALDALHREGIVCRDLNPNNILLDDRGHIQLT--YFSRWSEVEDSCDGEAVENMYCAPEVGGIS---EETEACDWWSLG  169 (237)
T ss_pred             HHHHHHHHhCCeeccCCCHHHEEEcCCCCEEEe--cccchhccccccccCCcCccccCCcccCCC---CCCchhhHHHHH
Confidence            346789999999999999999999999988888  999763322    23456679999987653   345789999999


Q ss_pred             HHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCH
Q psy12581         82 VLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTF  141 (153)
Q Consensus        82 ~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~  141 (153)
                      ++++++++|..|+......      .........|...+..+.+++.+||+.||++|+++
T Consensus       170 ~il~el~~g~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~~~  223 (237)
T cd05576         170 AILFELLTGKTLVECHPSG------INTHTTLNIPEWVSEEARSLLQQLLQFNPTERLGA  223 (237)
T ss_pred             HHHHHHHHCcchhhcCchh------cccccccCCcccCCHHHHHHHHHHccCCHHHhcCC
Confidence            9999999998876432211      11112234566688899999999999999999986

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=99.87  E-value=2e-22  Score=155.54  Aligned_cols=147  Identities=19%  Similarity=0.162  Sum_probs=103.5

Q ss_pred             cchhhHHhhhh---cCCCCCCCeeeeeeeeccccchhhcccccccccccCCcccCCcccCccccccCCCCCCcchhhHHH
Q psy12581          3 KKKIVYSFYLN---SKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQRGRCYYPAWMSPEALQKKPGDRNLEACDMWS   79 (153)
Q Consensus         3 ~~~~~~~~~lh---~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~dv~s   79 (153)
                      .+.+-+..|||   +.++.|+||++.||+++.++..++.+...+.........+++.|+|||.+.+.   .++.++||||
T Consensus       787 ~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~---~~~~~sDv~S  863 (968)
T PLN00113        787 IGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLRLSLPGLLCTDTKCFISSAYVAPETRETK---DITEKSDIYG  863 (968)
T ss_pred             HHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEEeccccccccCCCccccccccCcccccCC---CCCcccchhh
Confidence            34566789999   56899999999999999988887764444433333344678899999998754   4558899999


Q ss_pred             HHHHHHHHHhCCCCCCCCCchh-hhHHHHh---------hccccCC------CCCCCHHHHHHHHHHhcCCCCCCCCHHH
Q psy12581         80 FAVLLWELATREVPFADLTPME-VGMKVAL---------EGLRITI------PPGISSHLSKLIRICMNEDPGKRPTFDM  143 (153)
Q Consensus        80 ~g~~~~~~~~g~~p~~~~~~~~-~~~~~~~---------~~~~~~~------~~~~~~~~~~l~~~cl~~~p~~Rps~~~  143 (153)
                      +|+++||+++|+.||....... .......         ....+..      +.....++.+++.+||+.+|++||++++
T Consensus       864 ~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~e  943 (968)
T PLN00113        864 FGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHLDMWIDPSIRGDVSVNQNEIVEVMNLALHCTATDPTARPCAND  943 (968)
T ss_pred             HHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCccchhheeCccccCCCCccHHHHHHHHHHHHhhCcCCchhCcCHHH
Confidence            9999999999999985422111 0000000         0000100      1112235678899999999999999999


Q ss_pred             HHHHHhhhh
Q psy12581        144 VLPILDKMK  152 (153)
Q Consensus       144 ~l~~L~~~~  152 (153)
                      +++.|+++.
T Consensus       944 vl~~L~~~~  952 (968)
T PLN00113        944 VLKTLESAS  952 (968)
T ss_pred             HHHHHHHhh
Confidence            999999874

>KOG0667|consensus

Probab=99.87  E-value=2.5e-22  Score=143.07  Aligned_cols=137  Identities=22%  Similarity=0.232  Sum_probs=104.2

Q ss_pred             hHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccccCCcc----cCCcccCccccccCCCCCCcchhhHHHHHH
Q psy12581          7 VYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQRGRC----YYPAWMSPEALQKKPGDRNLEACDMWSFAV   82 (153)
Q Consensus         7 ~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~~~~----~~~~~~~pe~~~~~~~~~~~~~~dv~s~g~   82 (153)
                      -++.+||+.+|+|.|+++.||++..-+...|+++|||.+.......    -+..|.|||++.+.++.   .+.|+|||||
T Consensus       300 ~~L~~L~~l~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~~q~vytYiQSRfYRAPEVILGlpY~---~~IDmWSLGC  376 (586)
T KOG0667|consen  300 TALLFLHELGIIHCDLKPENILLKDPKRSRIKVIDFGSSCFESQRVYTYIQSRFYRAPEVILGLPYD---TAIDMWSLGC  376 (586)
T ss_pred             HHHHHHHhCCeeeccCChhheeeccCCcCceeEEecccccccCCcceeeeeccccccchhhccCCCC---Cccceeehhh
Confidence            4678899999999999999999988777777777999996655443    34579999999986554   8899999999


Q ss_pred             HHHHHHhCCCCCCCCCchhhhHHHHhh-cccc------------------------------------------------
Q psy12581         83 LLWELATREVPFADLTPMEVGMKVALE-GLRI------------------------------------------------  113 (153)
Q Consensus        83 ~~~~~~~g~~p~~~~~~~~~~~~~~~~-~~~~------------------------------------------------  113 (153)
                      ++.||.+|.+-|.+.+..+++..++.- +..+                                                
T Consensus       377 IlAEL~tG~PLfpG~ne~DQl~~I~e~lG~Pp~~mL~~~~~~~kff~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~  456 (586)
T KOG0667|consen  377 ILAELFTGEPLFPGDNEYDQLARIIEVLGLPPPKMLDTAKKAHKFFTSLKGFPRLCVETSAPRGTKSPEVRKYYRKARLE  456 (586)
T ss_pred             hHHhHhcCccccCCCCHHHHHHHHHHHhCCCCHHHHHhccccceehhccCCceeeeeeecccccccchhhhhhhhhhccc
Confidence            999999998888876665554433210 0000                                                


Q ss_pred             -CCC-C----------CCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581        114 -TIP-P----------GISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus       114 -~~~-~----------~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                       ..| .          .-...+.+++.+||..||..|+|..++++
T Consensus       457 ~~~P~~~~~l~~~~~~~~~~~F~dflk~~L~~dP~~R~tp~qal~  501 (586)
T KOG0667|consen  457 RRGPPGSRSLESGLPKADDKLFIDFLKRCLEWDPAERITPAQALN  501 (586)
T ss_pred             ccCCCCCcccchhcccccHHHHHHHHHHHhccCchhcCCHHHHhc
Confidence             011 0          11246899999999999999999998875

>KOG0695|consensus

Probab=99.87  E-value=4.6e-22  Score=133.49  Aligned_cols=130  Identities=19%  Similarity=0.313  Sum_probs=105.1

Q ss_pred             chhhHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccc-------cCCcccCCcccCccccccCCCCCCcchhh
Q psy12581          4 KKIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQ-------QRGRCYYPAWMSPEALQKKPGDRNLEACD   76 (153)
Q Consensus         4 ~~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~-------~~~~~~~~~~~~pe~~~~~~~~~~~~~~d   76 (153)
                      ...+++.|||+|||+-++++++|+++|.+|++|+.  |+|++..       +.+.||||.|.+||++++..++   -..|
T Consensus       359 ei~lal~flh~rgiiyrdlkldnvlldaeghiklt--dygmcke~l~~gd~tstfcgtpnyiapeilrgeeyg---fsvd  433 (593)
T KOG0695|consen  359 EICLALNFLHERGIIYRDLKLDNVLLDAEGHIKLT--DYGMCKEGLGPGDTTSTFCGTPNYIAPEILRGEEYG---FSVD  433 (593)
T ss_pred             HHHHHHHHHhhcCeeeeeccccceEEccCCceeec--ccchhhcCCCCCcccccccCCCcccchhhhcccccC---ceeh
Confidence            34578999999999999999999999999999998  9999832       3567999999999999986544   6789


Q ss_pred             HHHHHHHHHHHHhCCCCCCC-------CCchhh-hHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCC
Q psy12581         77 MWSFAVLLWELATREVPFAD-------LTPMEV-GMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPT  140 (153)
Q Consensus        77 v~s~g~~~~~~~~g~~p~~~-------~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps  140 (153)
                      .|++|++++||+.|+.||.-       .+.+.- ++-++.+  +...|..++-....+++.-|..||..|..
T Consensus       434 wwalgvlmfemmagrspfdivgm~n~d~ntedylfqvilek--qiriprslsvkas~vlkgflnkdp~erlg  503 (593)
T KOG0695|consen  434 WWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVILEK--QIRIPRSLSVKASHVLKGFLNKDPKERLG  503 (593)
T ss_pred             HHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHHhhh--cccccceeehhhHHHHHHhhcCCcHHhcC
Confidence            99999999999999999952       111222 2223333  44558888888999999999999998853

>KOG0586|consensus

Probab=99.87  E-value=9.1e-23  Score=144.42  Aligned_cols=136  Identities=25%  Similarity=0.338  Sum_probs=116.4

Q ss_pred             hhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccc------ccCCcccCCcccCccccccCCCCCCcchhhHHH
Q psy12581          6 IVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSF------QQRGRCYYPAWMSPEALQKKPGDRNLEACDMWS   79 (153)
Q Consensus         6 ~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~------~~~~~~~~~~~~~pe~~~~~~~~~~~~~~dv~s   79 (153)
                      .-+.+|||.+.|.|++++..|++++.+..+||+  |||++.      ...+.||++.|.+||+..+.++.  +++.|+|+
T Consensus       165 vsaveYcH~k~ivHrdLk~eNilL~~~mnikIa--DfgfS~~~~~~~~lqt~cgsppyAaPEl~~g~~y~--gpe~D~Ws  240 (596)
T KOG0586|consen  165 VSAVEYCHSKNIVHRDLKAENILLDENMNIKIA--DFGFSTFFDYGLMLQTFCGSPPYAAPELFNGKKYD--GPEVDIWS  240 (596)
T ss_pred             HHHHHHHhhcceeccccchhhcccccccceeee--ccccceeecccccccccCCCCCccChHhhcCcccC--Ccceehhh
Confidence            347899999999999999999999999999999  999983      23567999999999999887643  48899999


Q ss_pred             HHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHH
Q psy12581         80 FAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPI  147 (153)
Q Consensus        80 ~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~  147 (153)
                      +|+++|.++.|..||.+....+.....+...  ...|..++.++.+++.++|..+|++|++++++++.
T Consensus       241 lgvvly~LV~GsLPFDG~~lk~Lr~rvl~gk--~rIp~~ms~dce~lLrk~lvl~Pskr~~~dqim~~  306 (596)
T KOG0586|consen  241 LGVVLYALVEGSLPFDGQNLKELRPRVLRGK--YRIPFYMSCDCEDLLRKFLVLNPSKRGPCDQIMKD  306 (596)
T ss_pred             hhhhheeeeecccccCCcccccccchheeee--ecccceeechhHHHHHHhhccCccccCCHHHhhhh
Confidence            9999999999999999877666655555553  44577788999999999999999999999998753

>KOG0195|consensus

Probab=99.86  E-value=1.7e-21  Score=127.45  Aligned_cols=152  Identities=63%  Similarity=1.022  Sum_probs=132.2

Q ss_pred             ccchhhHHhhhhcCC-CCCC-CeeeeeeeeccccchhhcccccccccccCCcccCCcccCccccccCCCCCCcchhhHHH
Q psy12581          2 KKKKIVYSFYLNSKK-SKTS-NAFLFCCQIDEDLTARINMADAQFSFQQRGRCYYPAWMSPEALQKKPGDRNLEACDMWS   79 (153)
Q Consensus         2 ~~~~~~~~~~lh~~~-i~~~-ni~~~~~~~~~~~~~kl~~~d~g~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~dv~s   79 (153)
                      +||.+....|||+.. ++|+ -+....+.||++.+.+++..|--++++..+....|.|++||.+...+....-..+|+||
T Consensus       295 aldiargmaflhslep~ipr~~lns~hvmidedltarismad~kfsfqe~gr~y~pawmspealqrkped~n~raadmws  374 (448)
T KOG0195|consen  295 ALDIARGMAFLHSLEPMIPRFYLNSKHVMIDEDLTARISMADTKFSFQEVGRAYSPAWMSPEALQRKPEDLNIRAADMWS  374 (448)
T ss_pred             HHHHHhhHHHHhhcchhhhhhhcccceEEecchhhhheecccceeeeeccccccCcccCCHHHHhcCchhcchhhhhHHH
Confidence            467777888999854 3332 34446778899999999988988888888888999999999998765544447799999


Q ss_pred             HHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHhhhhC
Q psy12581         80 FAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKMKR  153 (153)
Q Consensus        80 ~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~~~~~  153 (153)
                      |++++||+.|...||....+.+...++..++++...|+..+..+..++.-|...||.+||.+..++-.|+++.+
T Consensus       375 faillwel~trevpfadlspmecgmkialeglrv~ippgis~hm~klm~icmnedpgkrpkfdmivpilekm~~  448 (448)
T KOG0195|consen  375 FAILLWELNTREVPFADLSPMECGMKIALEGLRVHIPPGISRHMNKLMNICMNEDPGKRPKFDMIVPILEKMIL  448 (448)
T ss_pred             HHHHHHHhhccccccccCCchhhhhhhhhccccccCCCCccHHHHHHHHHHhcCCCCcCCCcceehhhHHHhcC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999863

>KOG0587|consensus

Probab=99.86  E-value=1.5e-22  Score=148.16  Aligned_cols=141  Identities=21%  Similarity=0.301  Sum_probs=117.5

Q ss_pred             chhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc-------CCcccCCcccCccccccC--CCCCCcch
Q psy12581          4 KKIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ-------RGRCYYPAWMSPEALQKK--PGDRNLEA   74 (153)
Q Consensus         4 ~~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~-------~~~~~~~~~~~pe~~~~~--~~~~~~~~   74 (153)
                      ..-..+.+||...++|++|+..||++++++.+|++  |||.+.+.       .+..|||.|||||++...  +...+...
T Consensus       131 e~lrgl~HLH~nkviHRDikG~NiLLT~e~~VKLv--DFGvSaQldsT~grRnT~iGtP~WMAPEViac~e~~d~tyd~R  208 (953)
T KOG0587|consen  131 EILRGLAHLHNNKVIHRDIKGQNVLLTENAEVKLV--DFGVSAQLDSTVGRRNTFIGTPYWMAPEVIACDESPDATYDYR  208 (953)
T ss_pred             HHHHHHHHHhhcceeeecccCceEEEeccCcEEEe--eeeeeeeeecccccccCcCCCcccccceeeecccCCCCCcccc
Confidence            34567889999999999999999999999999999  99998433       445899999999998643  23346678


Q ss_pred             hhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhcc-ccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581         75 CDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGL-RITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus        75 ~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      +|+||+|++..|+..|.+|+....+...+..+.+.+. .+..|..++..+.++++.||..|..+||+..++++
T Consensus       209 ~D~WsLGITaIEladG~PPl~DmHPmraLF~IpRNPPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~  281 (953)
T KOG0587|consen  209 SDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPPPKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLK  281 (953)
T ss_pred             cchhhccceeehhcCCCCCccCcchhhhhccCCCCCCccccchhhHHHHHHHHHHHHHhhccccCcchhhhcc
Confidence            9999999999999999999999888887766654432 33346778999999999999999999999998874

>KOG1025|consensus

Probab=99.86  E-value=1.9e-21  Score=142.24  Aligned_cols=140  Identities=21%  Similarity=0.361  Sum_probs=119.1

Q ss_pred             hHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccccC---------CcccCCcccCccccccCCCCCCcchhhH
Q psy12581          7 VYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQR---------GRCYYPAWMSPEALQKKPGDRNLEACDM   77 (153)
Q Consensus         7 ~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~---------~~~~~~~~~~pe~~~~~~~~~~~~~~dv   77 (153)
                      =...|||.+.+.|+|+..+|++|.+-..+|+.  |||++....         .....+.||+-|.+...   .++.++||
T Consensus       809 kgM~YLe~qrlVHrdLaaRNVLVksP~hvkit--dfgla~ll~~d~~ey~~~~gK~pikwmale~i~~~---~~thqSDV  883 (1177)
T KOG1025|consen  809 KGMKYLEEQRLVHRDLAARNVLVKSPNHVKIT--DFGLAKLLAPDEKEYSAPGGKVPIKWMALESIRIR---KYTHQSDV  883 (1177)
T ss_pred             HHHHHHHhcchhhhhhhhhheeecCCCeEEEE--ecchhhccCcccccccccccccCcHHHHHHHhhcc---CCCchhhh
Confidence            35789999999999999999999999999988  999984432         22345678988888764   45689999


Q ss_pred             HHHHHHHHHHHh-CCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHhhhh
Q psy12581         78 WSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKMK  152 (153)
Q Consensus        78 ~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~~~~  152 (153)
                      |+||++.||++| |..||.+....++ ...+..+-+++.|+.++.++.-++.+||..|+..||+++++.+.+.++-
T Consensus       884 WsfGVtiWElmTFGa~Py~gi~~~eI-~dlle~geRLsqPpiCtiDVy~~mvkCwmid~~~rp~fkel~~~fs~~a  958 (1177)
T KOG1025|consen  884 WSFGVTIWELMTFGAKPYDGIPAEEI-PDLLEKGERLSQPPICTIDVYMVMVKCWMIDADSRPTFKELAEEFSRMA  958 (1177)
T ss_pred             hhhhhhHHHHHhcCCCccCCCCHHHh-hHHHhccccCCCCCCccHHHHHHHHHHhccCcccCccHHHHHHHHHHHh
Confidence            999999999999 9999988776554 4556677788999999999999999999999999999999999998774

>KOG0984|consensus

Probab=99.85  E-value=4.5e-22  Score=125.07  Aligned_cols=113  Identities=17%  Similarity=0.144  Sum_probs=84.9

Q ss_pred             ccchhhHHhhhhc-CCCCCCCeeeeeeeeccccchhhcccccccccccC------CcccCCcccCccccccCCC-CCCcc
Q psy12581          2 KKKKIVYSFYLNS-KKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQR------GRCYYPAWMSPEALQKKPG-DRNLE   73 (153)
Q Consensus         2 ~~~~~~~~~~lh~-~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~------~~~~~~~~~~pe~~~~~~~-~~~~~   73 (153)
                      ++-..-++.|||+ ..++|+|++++||+|+.+|.+|++  |||++-.+.      ...|...|||||.+..... ..++.
T Consensus       154 a~Svv~al~~L~~kL~vIHRDvKPsNiLIn~~GqVKiC--DFGIsG~L~dSiAkt~daGCkpYmaPEri~~e~n~~gY~v  231 (282)
T KOG0984|consen  154 AVSVVHALEFLHSKLSVIHRDVKPSNILINYDGQVKIC--DFGISGYLVDSIAKTMDAGCKPYMAPERINPELNQKGYSV  231 (282)
T ss_pred             HHHHHHHHHHHHHHhhhhhccCCcceEEEccCCcEEEc--ccccceeehhhhHHHHhcCCCccCChhhcCcccCccccee
Confidence            4455678899997 468999999999999999999999  999984332      2356678999999875432 25778


Q ss_pred             hhhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCC
Q psy12581         74 ACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIP  116 (153)
Q Consensus        74 ~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~  116 (153)
                      ++|+||+|+++.|+.+++.||.....+-.+.+.+.....+..|
T Consensus       232 ksDvWSLGItmiElA~lr~PY~~w~tpF~qLkqvVeep~P~Lp  274 (282)
T KOG0984|consen  232 KSDVWSLGITMIEMAILRFPYESWGTPFQQLKQVVEEPSPQLP  274 (282)
T ss_pred             ehhhhhhhhhhhhhhhccccccccCCHHHHHHHHhcCCCCCCc
Confidence            9999999999999999999998765544433333333333333

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=99.85  E-value=1.4e-21  Score=142.79  Aligned_cols=136  Identities=11%  Similarity=-0.030  Sum_probs=92.1

Q ss_pred             hHHhhhhcCCCCCCCeeeeeeeecc-ccchhhccccccccccc--------CCcccCCcccCccccccCCCC--------
Q psy12581          7 VYSFYLNSKKSKTSNAFLFCCQIDE-DLTARINMADAQFSFQQ--------RGRCYYPAWMSPEALQKKPGD--------   69 (153)
Q Consensus         7 ~~~~~lh~~~i~~~ni~~~~~~~~~-~~~~kl~~~d~g~~~~~--------~~~~~~~~~~~pe~~~~~~~~--------   69 (153)
                      -++.|||+++|.|+||++.||+++. ++.+|+.  |||++...        ....+++.|++||.+......        
T Consensus       266 ~aL~yLH~~gIiHRDLKP~NILl~~~~~~~KL~--DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~  343 (566)
T PLN03225        266 FALDGLHSTGIVHRDVKPQNIIFSEGSGSFKII--DLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPV  343 (566)
T ss_pred             HHHHHHHHCCEEeCcCCHHHEEEeCCCCcEEEE--eCCCccccccccccCCcccccCCCccChHHhhccCCCCCCccccc
Confidence            4688999999999999999999985 5778888  99998432        234678899999965422111        


Q ss_pred             -----------CCcchhhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhh----------ccccCC----------CCC
Q psy12581         70 -----------RNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALE----------GLRITI----------PPG  118 (153)
Q Consensus        70 -----------~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~----------~~~~~~----------~~~  118 (153)
                                 .++.+.|+||+|+++||++++..+....  ..........          ......          ...
T Consensus       344 ~~~~sp~l~~~~~~~k~DVwSlGviL~el~~~~~~~~~~--~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~  421 (566)
T PLN03225        344 ATALSPVLWQLNLPDRFDIYSAGLIFLQMAFPNLRSDSN--LIQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDL  421 (566)
T ss_pred             cccccchhccccCCCCcccHHHHHHHHHHHhCcCCCchH--HHHHHHHHHhcCCcHHHHHHhhccccchhhhhhhhhccc
Confidence                       1224569999999999999876554321  1111111110          000000          011


Q ss_pred             CCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581        119 ISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus       119 ~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      ......+++.+||+.||++|||+.++++
T Consensus       422 ~~~~~~dLi~~mL~~dP~kR~ta~e~L~  449 (566)
T PLN03225        422 DGGAGWELLKSMMRFKGRQRISAKAALA  449 (566)
T ss_pred             cchHHHHHHHHHccCCcccCCCHHHHhC
Confidence            2234568999999999999999999985

>KOG0669|consensus

Probab=99.83  E-value=1.2e-20  Score=122.08  Aligned_cols=136  Identities=17%  Similarity=0.144  Sum_probs=103.8

Q ss_pred             HHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc-----------CCcccCCcccCccccccCCCCCCcchhh
Q psy12581          8 YSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ-----------RGRCYYPAWMSPEALQKKPGDRNLEACD   76 (153)
Q Consensus         8 ~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~-----------~~~~~~~~~~~pe~~~~~~~~~~~~~~d   76 (153)
                      .+.|+|+.+|.|+|++..|++|+.+|.+|+.  |||++...           +++.-|.+|.+||.+.+.+  .++++.|
T Consensus       136 GL~~iHr~kilHRDmKaaNvLIt~dgilklA--DFGlar~fs~~~n~~kprytnrvvTLwYrppEllLG~r--~yg~~iD  211 (376)
T KOG0669|consen  136 GLYYIHRNKILHRDMKAANVLITKDGILKLA--DFGLARAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDR--EYGPPID  211 (376)
T ss_pred             HHHHHHHhhHHhhcccHhhEEEcCCceEEee--ccccccceecccccCCCCcccceeeeecCCHHHhhccc--ccCCcch
Confidence            3689999999999999999999999999999  99998322           2334588999999998753  4568999


Q ss_pred             HHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhh--ccc------------------cCCCC-------------CCCHHH
Q psy12581         77 MWSFAVLLWELATREVPFADLTPMEVGMKVALE--GLR------------------ITIPP-------------GISSHL  123 (153)
Q Consensus        77 v~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~--~~~------------------~~~~~-------------~~~~~~  123 (153)
                      +|.-||++.|++++.+.+.+.....++..+..-  ...                  .+.|.             .-..+.
T Consensus       212 iWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~tkevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a  291 (376)
T KOG0669|consen  212 IWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSITKEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEA  291 (376)
T ss_pred             hHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCCcccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhH
Confidence            999999999999998888776665554433210  000                  01111             113478


Q ss_pred             HHHHHHHhcCCCCCCCCHHHHHHH
Q psy12581        124 SKLIRICMNEDPGKRPTFDMVLPI  147 (153)
Q Consensus       124 ~~l~~~cl~~~p~~Rps~~~~l~~  147 (153)
                      .+++.+++..||.+|+++.++++.
T Consensus       292 ~dLle~ll~~DP~kR~~ad~alnh  315 (376)
T KOG0669|consen  292 LDLLEKLLKLDPTKRIDADQALNH  315 (376)
T ss_pred             HHHHHHHhccCcccCcchHhhhch
Confidence            899999999999999999998753

>KOG1027|consensus

Probab=99.81  E-value=6.2e-21  Score=139.27  Aligned_cols=135  Identities=23%  Similarity=0.269  Sum_probs=100.5

Q ss_pred             hHHhhhhcCCCCCCCeeeeeeeecc---ccchhhccccccccccc----------CCcccCCcccCccccccCCCCCCcc
Q psy12581          7 VYSFYLNSKKSKTSNAFLFCCQIDE---DLTARINMADAQFSFQQ----------RGRCYYPAWMSPEALQKKPGDRNLE   73 (153)
Q Consensus         7 ~~~~~lh~~~i~~~ni~~~~~~~~~---~~~~kl~~~d~g~~~~~----------~~~~~~~~~~~pe~~~~~~~~~~~~   73 (153)
                      -.+.+||+.+|+|+|+++.||+|+.   ++..+..++|||++.+.          .+..||-+|.|||.+...+.   +.
T Consensus       617 ~GlaHLHsl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~~~~sS~~r~s~~sGt~GW~APE~L~~~~~---~~  693 (903)
T KOG1027|consen  617 SGLAHLHSLKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLAGGKSSFSRLSGGSGTSGWQAPEQLREDRK---TQ  693 (903)
T ss_pred             HHHHHHHhcccccccCCCceEEEEccCCCcceeEEecccccccccCCCcchhhcccCCCCcccccCHHHHhcccc---Cc
Confidence            3567899999999999999999987   56666666699998443          34478899999999987543   36


Q ss_pred             hhhHHHHHHHHHHHHh-CCCCCCCCCchhhhHHHHhhccccC-CCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581         74 ACDMWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRIT-IPPGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus        74 ~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      +.|++|+||++|+.++ |..||......+.  .++....... .......++.+++.+|+.++|..||++.+|+.
T Consensus       694 avDiFslGCvfyYvltgG~HpFGd~~~R~~--NIl~~~~~L~~L~~~~d~eA~dLI~~ml~~dP~~RPsa~~VL~  766 (903)
T KOG1027|consen  694 AVDIFSLGCVFYYVLTGGSHPFGDSLERQA--NILTGNYTLVHLEPLPDCEAKDLISRMLNPDPQLRPSATDVLN  766 (903)
T ss_pred             ccchhhcCceEEEEecCCccCCCchHHhhh--hhhcCccceeeeccCchHHHHHHHHHhcCCCcccCCCHHHHhC
Confidence            8899999999999988 5889976443322  2333322111 11111128999999999999999999999973

>KOG0665|consensus

Probab=99.80  E-value=1.1e-19  Score=120.55  Aligned_cols=136  Identities=19%  Similarity=0.128  Sum_probs=102.2

Q ss_pred             hhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc------CCcccCCcccCccccccCCCCCCcchhhHHH
Q psy12581          6 IVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ------RGRCYYPAWMSPEALQKKPGDRNLEACDMWS   79 (153)
Q Consensus         6 ~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~------~~~~~~~~~~~pe~~~~~~~~~~~~~~dv~s   79 (153)
                      +-+-+|||+.+|.|+|++++||++..+...||.  |||++...      +....+..|.+||++.+..   +....|+||
T Consensus       128 ~~~ik~lhs~~IihRdLkPsnivv~~~~~lKi~--dfg~ar~e~~~~~mtpyVvtRyyrapevil~~~---~ke~vdiwS  202 (369)
T KOG0665|consen  128 LCGIKHLHSAGIIHRDLKPSNIVVNSDCTLKIL--DFGLARTEDTDFMMTPYVVTRYYRAPEVILGMG---YKENVDIWS  202 (369)
T ss_pred             HHHHHHHHhcceeecccCcccceecchhheeec--cchhhcccCcccccCchhheeeccCchheeccC---Ccccchhhh
Confidence            345689999999999999999999999999999  99998543      2335677899999998753   457899999


Q ss_pred             HHHHHHHHHhCCCCCCCCCchhhhHHHHhhcccc-------------------------C----CC-----------CCC
Q psy12581         80 FAVLLWELATREVPFADLTPMEVGMKVALEGLRI-------------------------T----IP-----------PGI  119 (153)
Q Consensus        80 ~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~-------------------------~----~~-----------~~~  119 (153)
                      +||++.|+++|+.-|.+...-+++.++......+                         .    +|           ..-
T Consensus       203 vGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~qL~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~  282 (369)
T KOG0665|consen  203 VGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQLQPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLD  282 (369)
T ss_pred             hhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHHHHhhHHHHHHhhcChHhhccchhhhCCcccccccccCCccc
Confidence            9999999999988777654443333222110000                         0    01           111


Q ss_pred             CHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581        120 SSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus       120 ~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      +.-+++++.+||..+|++|.|+++++.
T Consensus       283 ~~~ardll~~MLvi~pe~Risv~daL~  309 (369)
T KOG0665|consen  283 CSLARDLLSKMLVIDPEKRISVDDALR  309 (369)
T ss_pred             hHHHHHHHHHhhccChhhcccHHHHhc
Confidence            245789999999999999999999875

>KOG2052|consensus

Probab=99.79  E-value=3.5e-19  Score=122.68  Aligned_cols=134  Identities=23%  Similarity=0.403  Sum_probs=97.4

Q ss_pred             CCCCCeeeeeeeeccccchhhccccccccccc-----------CCcccCCcccCccccccCC---CCCCcchhhHHHHHH
Q psy12581         17 SKTSNAFLFCCQIDEDLTARINMADAQFSFQQ-----------RGRCYYPAWMSPEALQKKP---GDRNLEACDMWSFAV   82 (153)
Q Consensus        17 i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~-----------~~~~~~~~~~~pe~~~~~~---~~~~~~~~dv~s~g~   82 (153)
                      |-|+||+..||+|-++|.+-|.  |+|++..-           ..++||..|||||++...-   +-..-..+|+||||.
T Consensus       337 IAHRDlKSKNILVKkn~~C~IA--DLGLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgL  414 (513)
T KOG2052|consen  337 IAHRDLKSKNILVKKNGTCCIA--DLGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGL  414 (513)
T ss_pred             hhccccccccEEEccCCcEEEe--eceeeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHH
Confidence            4556666666677999999999  99998332           3458999999999986421   111125689999999


Q ss_pred             HHHHHHhC----------CCCCCCCCchhhhHH-----HHhhccccCCCCCCC-----HHHHHHHHHHhcCCCCCCCCHH
Q psy12581         83 LLWELATR----------EVPFADLTPMEVGMK-----VALEGLRITIPPGIS-----SHLSKLIRICMNEDPGKRPTFD  142 (153)
Q Consensus        83 ~~~~~~~g----------~~p~~~~~~~~~~~~-----~~~~~~~~~~~~~~~-----~~~~~l~~~cl~~~p~~Rps~~  142 (153)
                      ++||+...          +.||.+..+.+....     +..+..++..|..+.     ..+.++|+.||..+|..|.|+-
T Consensus       415 VlWEiarRc~~ggi~eey~~Pyyd~Vp~DPs~eeMrkVVCv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltAL  494 (513)
T KOG2052|consen  415 VLWEIARRCESGGIVEEYQLPYYDVVPSDPSFEEMRKVVCVQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTAL  494 (513)
T ss_pred             HHHHHHHHhhcCCEehhhcCCcccCCCCCCCHHHHhcceeecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHH
Confidence            99998632          578876544333222     334566777776554     3577889999999999999999


Q ss_pred             HHHHHHhhhh
Q psy12581        143 MVLPILDKMK  152 (153)
Q Consensus       143 ~~l~~L~~~~  152 (153)
                      .+-+.|.++.
T Consensus       495 riKKtl~~l~  504 (513)
T KOG2052|consen  495 RIKKTLAKLS  504 (513)
T ss_pred             HHHHHHHHHh
Confidence            9999998874

>KOG0608|consensus

Probab=99.79  E-value=1.2e-19  Score=130.17  Aligned_cols=127  Identities=22%  Similarity=0.238  Sum_probs=100.1

Q ss_pred             hHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc--------------------------------------
Q psy12581          7 VYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ--------------------------------------   48 (153)
Q Consensus         7 ~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~--------------------------------------   48 (153)
                      -+.++.|..|++|+||+++||+||.+|++|+.  |||++...                                      
T Consensus       740 cAiesVHkmGFIHRDiKPDNILIDrdGHIKLT--DFGLCTGfRWTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~  817 (1034)
T KOG0608|consen  740 CAIESVHKMGFIHRDIKPDNILIDRDGHIKLT--DFGLCTGFRWTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLER  817 (1034)
T ss_pred             HHHHHHHhccceecccCccceEEccCCceeee--eccccccceeccccccccCCCccccccCCCchhhccccccchHHHH
Confidence            46788999999999999999999999999999  99998110                                      


Q ss_pred             -----------CCcccCCcccCccccccCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHHh--hccccCC
Q psy12581         49 -----------RGRCYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVAL--EGLRITI  115 (153)
Q Consensus        49 -----------~~~~~~~~~~~pe~~~~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~--~~~~~~~  115 (153)
                                 ....||+.|++||++...   .++..+|.|+.|+++|||+-|++||....+.+...++..  .-+..+.
T Consensus       818 ra~~~h~r~~ahslvgt~nyiapevl~r~---g~~q~cdwws~gvil~em~~g~~pf~~~tp~~tq~kv~nw~~~l~~~~  894 (1034)
T KOG0608|consen  818 RAMRQHQRILAHSLVGTPNYIAPEVLART---GYTQLCDWWSVGVILYEMLVGQPPFLADTPGETQYKVINWRNFLHIPY  894 (1034)
T ss_pred             HHHhhhhhhhhhhhcCCCcccChHHhccc---CccccchhhHhhHHHHHHhhCCCCccCCCCCcceeeeeehhhcccccc
Confidence                       122789999999999763   455789999999999999999999988877776655433  2223344


Q ss_pred             CCCCCHHHHHHHHHHhcCCCCCCC
Q psy12581        116 PPGISSHLSKLIRICMNEDPGKRP  139 (153)
Q Consensus       116 ~~~~~~~~~~l~~~cl~~~p~~Rp  139 (153)
                      ..+.++++.+++.++.. +++.|.
T Consensus       895 ~~~ls~e~~~li~kLc~-sad~RL  917 (1034)
T KOG0608|consen  895 QGNLSKEALDLIQKLCC-SADSRL  917 (1034)
T ss_pred             ccccCHHHHHHHHHHhc-Chhhhh
Confidence            45689999999988654 366665

>KOG0671|consensus

Probab=99.78  E-value=4.7e-20  Score=124.67  Aligned_cols=136  Identities=20%  Similarity=0.180  Sum_probs=89.6

Q ss_pred             HHhhhhcCCCCCCCeeeeeeeeccccc------------------hhhccccccccccc----CCcccCCcccCcccccc
Q psy12581          8 YSFYLNSKKSKTSNAFLFCCQIDEDLT------------------ARINMADAQFSFQQ----RGRCYYPAWMSPEALQK   65 (153)
Q Consensus         8 ~~~~lh~~~i~~~ni~~~~~~~~~~~~------------------~kl~~~d~g~~~~~----~~~~~~~~~~~pe~~~~   65 (153)
                      +..|||+..+.|.|+++.||++..+-+                  .-|++.|||.+...    .....|..|.|||++.+
T Consensus       204 sv~fLh~~kl~HTDLKPENILfvss~~~~~~~~k~~~~~~r~~ks~~I~vIDFGsAtf~~e~hs~iVsTRHYRAPEViLg  283 (415)
T KOG0671|consen  204 SVAFLHDLKLTHTDLKPENILFVSSEYFKTYNPKKKVCFIRPLKSTAIKVIDFGSATFDHEHHSTIVSTRHYRAPEVILG  283 (415)
T ss_pred             HHHHHHhcceeecCCChheEEEeccceEEEeccCCccceeccCCCcceEEEecCCcceeccCcceeeeccccCCchheec
Confidence            457888776666666666665532111                  11335599998443    23477889999999997


Q ss_pred             CCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCchhhh---HHHHh--------hc--------cccCCC----------
Q psy12581         66 KPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVG---MKVAL--------EG--------LRITIP----------  116 (153)
Q Consensus        66 ~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~---~~~~~--------~~--------~~~~~~----------  116 (153)
                      .   .++..+|+||+||+++|+.+|..-|+.-+..+.+   ..++.        ..        .++..+          
T Consensus       284 L---GwS~pCDvWSiGCIL~ElytG~~LFqtHen~EHLaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~  360 (415)
T KOG0671|consen  284 L---GWSQPCDVWSIGCILVELYTGETLFQTHENLEHLAMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKY  360 (415)
T ss_pred             c---CcCCccCceeeeeEEEEeeccceecccCCcHHHHHHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchh
Confidence            5   4568999999999999999999888664433211   11110        00        000000          


Q ss_pred             ---------------CCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581        117 ---------------PGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus       117 ---------------~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                                     ......+.+++++||..||.+|+|+.|++.
T Consensus       361 v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~~RiTl~EAL~  405 (415)
T KOG0671|consen  361 VFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDPARRITLREALS  405 (415)
T ss_pred             hhcCCccHHHHhccCcHHHhHHHHHHHHHHccCccccccHHHHhc
Confidence                           011235789999999999999999999874

>KOG4236|consensus

Probab=99.77  E-value=2.5e-20  Score=131.29  Aligned_cols=135  Identities=21%  Similarity=0.212  Sum_probs=104.4

Q ss_pred             hhHHhhhhcCCCCCCCeeeeeeeecccc---chhhccccccccccc------CCcccCCcccCccccccCCCCCCcchhh
Q psy12581          6 IVYSFYLNSKKSKTSNAFLFCCQIDEDL---TARINMADAQFSFQQ------RGRCYYPAWMSPEALQKKPGDRNLEACD   76 (153)
Q Consensus         6 ~~~~~~lh~~~i~~~ni~~~~~~~~~~~---~~kl~~~d~g~~~~~------~~~~~~~~~~~pe~~~~~~~~~~~~~~d   76 (153)
                      -++++|||+++|.|.|+++.|+++....   .+|++  |||++..-      ....|||.|++||+++..   .+++.-|
T Consensus       674 L~ALr~LH~knIvHCDLKPENVLLas~~~FPQvKlC--DFGfARiIgEksFRrsVVGTPAYLaPEVLrnk---GyNrSLD  748 (888)
T KOG4236|consen  674 LVALRYLHFKNIVHCDLKPENVLLASASPFPQVKLC--DFGFARIIGEKSFRRSVVGTPAYLAPEVLRNK---GYNRSLD  748 (888)
T ss_pred             HHHHHHhhhcceeeccCCchheeeccCCCCCceeec--cccceeecchhhhhhhhcCCccccCHHHHhhc---ccccccc
Confidence            4689999999999999999999886443   35777  99998432      445899999999999875   3457899


Q ss_pred             HHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHH
Q psy12581         77 MWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVL  145 (153)
Q Consensus        77 v~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l  145 (153)
                      +||+|+++|-.++|..||.+..+-....+...-.+.++...+++....+++..+|+.+-++|.|....+
T Consensus       749 MWSVGVIiYVsLSGTFPFNEdEdIndQIQNAaFMyPp~PW~eis~~AidlIn~LLqVkm~kRysvdk~l  817 (888)
T KOG4236|consen  749 MWSVGVIIYVSLSGTFPFNEDEDINDQIQNAAFMYPPNPWSEISPEAIDLINNLLQVKMRKRYSVDKSL  817 (888)
T ss_pred             ceeeeEEEEEEecccccCCCccchhHHhhccccccCCCchhhcCHHHHHHHHHHHHHHHHHhcchHhhc
Confidence            999999999999999999775543322221222223333456889999999999999999999988765

>KOG0666|consensus

Probab=99.77  E-value=1.5e-18  Score=115.30  Aligned_cols=135  Identities=19%  Similarity=0.099  Sum_probs=96.3

Q ss_pred             HhhhhcCCCCCCCeeeeeeeeccc----cchhhccccccccccc----------CCcccCCcccCccccccCCCCCCcch
Q psy12581          9 SFYLNSKKSKTSNAFLFCCQIDED----LTARINMADAQFSFQQ----------RGRCYYPAWMSPEALQKKPGDRNLEA   74 (153)
Q Consensus         9 ~~~lh~~~i~~~ni~~~~~~~~~~----~~~kl~~~d~g~~~~~----------~~~~~~~~~~~pe~~~~~~~~~~~~~   74 (153)
                      ..|||++-+.|+|+++.||++..+    |.+|+.  |+|++..-          ....-|.+|.|||.+.+.+  .++++
T Consensus       145 v~YLH~NWvlHRDLKPaNIlvmgdgperG~VKIa--DlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~--hYT~A  220 (438)
T KOG0666|consen  145 VHYLHSNWVLHRDLKPANILVMGDGPERGRVKIA--DLGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGAR--HYTKA  220 (438)
T ss_pred             hHHHhhhheeeccCCcceEEEeccCCccCeeEee--cccHHHHhhccccccccCCceEEEEEecChHHhcccc--cccch
Confidence            479999999999999999999877    666666  99998322          2235678999999999864  46789


Q ss_pred             hhHHHHHHHHHHHHhCCCCCCCCCc---------hhhhHHHHhhcccc---------CCC--------------------
Q psy12581         75 CDMWSFAVLLWELATREVPFADLTP---------MEVGMKVALEGLRI---------TIP--------------------  116 (153)
Q Consensus        75 ~dv~s~g~~~~~~~~g~~p~~~~~~---------~~~~~~~~~~~~~~---------~~~--------------------  116 (153)
                      .|+|++||++.|+++.++-|.+...         ..+..++..--..+         ..|                    
T Consensus       221 iDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~dQl~rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~  300 (438)
T KOG0666|consen  221 IDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHDQLDRIFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLH  300 (438)
T ss_pred             hhhHHHHHHHHHHHccCccccchhhhcccCCCchHHHHHHHHHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHH
Confidence            9999999999999998877754211         11111221100000         000                    


Q ss_pred             ------CCCCHHHHHHHHHHhcCCCCCCCCHHHHHHH
Q psy12581        117 ------PGISSHLSKLIRICMNEDPGKRPTFDMVLPI  147 (153)
Q Consensus       117 ------~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~  147 (153)
                            ..-++...+++.++|+.||.+|.|++++++.
T Consensus       301 ~~~~~~k~k~~~a~~LL~klL~yDP~kRIta~qAleh  337 (438)
T KOG0666|consen  301 KYYHKHKVKDPSALDLLQKLLTYDPIKRITAEQALEH  337 (438)
T ss_pred             HHHHHhcCCCchHHHHHHHHhccCchhhccHHHHhcc
Confidence                  0113457899999999999999999998764

>KOG0576|consensus

Probab=99.77  E-value=3.3e-19  Score=128.01  Aligned_cols=143  Identities=20%  Similarity=0.320  Sum_probs=117.2

Q ss_pred             ccchhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccc-------ccCCcccCCcccCccccccCCCCCCcch
Q psy12581          2 KKKKIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSF-------QQRGRCYYPAWMSPEALQKKPGDRNLEA   74 (153)
Q Consensus         2 ~~~~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~-------~~~~~~~~~~~~~pe~~~~~~~~~~~~~   74 (153)
                      |...+-.++|||+.+=.|++|+..||++++.|.+|+.  |||.+-       +.....||++||+||+..-.+.+.+...
T Consensus       118 cRetl~gl~ylhs~gk~hRdiKGanilltd~gDvkla--Dfgvsaqitati~KrksfiGtpywmapEvaaverkggynql  195 (829)
T KOG0576|consen  118 CRETLQGLKYLHSQGKIHRDIKGANILLTDEGDVKLA--DFGVSAQITATIAKRKSFIGTPYWMAPEVAAVERKGGYNQL  195 (829)
T ss_pred             HhhhhccchhhhcCCcccccccccceeecccCceeec--ccCchhhhhhhhhhhhcccCCccccchhHHHHHhccccccc
Confidence            5667778899999999999999999999999999999  999872       3356689999999998754444567789


Q ss_pred             hhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhcccc---CCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581         75 CDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRI---TIPPGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus        75 ~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      +|+|+.|+...|+...++|.....+..........+..+   .-+..+++.+.+|++.++..+|.+||+++.++.
T Consensus       196 cdiwa~gitAiel~eLqpplfdlhpmr~l~LmTkS~~qpp~lkDk~kws~~fh~fvK~altknpKkRptaeklL~  270 (829)
T KOG0576|consen  196 CDIWALGITAIELGELQPPLFDLHPMRALFLMTKSGFQPPTLKDKTKWSEFFHNFVKGALTKNPKKRPTAEKLLQ  270 (829)
T ss_pred             ccccccccchhhhhhcCCcccccchHHHHHHhhccCCCCCcccCCccchHHHHHHHHHHhcCCCccCCChhhhee
Confidence            999999999999988888887777776655444433332   335568999999999999999999999987764

>KOG3653|consensus

Probab=99.76  E-value=1.6e-18  Score=120.18  Aligned_cols=143  Identities=22%  Similarity=0.295  Sum_probs=104.3

Q ss_pred             HHhhhhc---------CCCCCCCeeeeeeeeccccchhhccccccccccc---------CCcccCCcccCccccccCCC-
Q psy12581          8 YSFYLNS---------KKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ---------RGRCYYPAWMSPEALQKKPG-   68 (153)
Q Consensus         8 ~~~~lh~---------~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~---------~~~~~~~~~~~pe~~~~~~~-   68 (153)
                      .+.|||.         ..|.|+||+..||++-.++++-|.  |||++...         .+..||..|||||++.+.-. 
T Consensus       319 GLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIa--DFGLAl~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl  396 (534)
T KOG3653|consen  319 GLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIA--DFGLALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINL  396 (534)
T ss_pred             HHHHhcccCCcCCCCCCccccccccccceEEccCCcEEee--ccceeEEecCCCCCcchhhhhhhhhhcCHHHHhhhccc
Confidence            4567774         357888888888899999999999  99999433         24589999999999976421 


Q ss_pred             --CCCcchhhHHHHHHHHHHHHhCC------------CCCCC-----CCchhhhHHHHhhccccCCCCCCC-----HHHH
Q psy12581         69 --DRNLEACDMWSFAVLLWELATRE------------VPFAD-----LTPMEVGMKVALEGLRITIPPGIS-----SHLS  124 (153)
Q Consensus        69 --~~~~~~~dv~s~g~~~~~~~~g~------------~p~~~-----~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~  124 (153)
                        ...-.+.||||+|.++||+++.-            .||..     ..-.+....++++..++..|..+.     ..+.
T Consensus       397 ~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~hPt~e~mq~~VV~kK~RP~~p~~W~~h~~~~~l~  476 (534)
T KOG3653|consen  397 QDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVGNHPTLEEMQELVVRKKQRPKIPDAWRKHAGMAVLC  476 (534)
T ss_pred             ccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHhcCCCCHHHHHHHHHhhccCCCChhhhhcCccHHHHH
Confidence              11225689999999999998742            22221     111222334566666777775432     4578


Q ss_pred             HHHHHHhcCCCCCCCCHHHHHHHHhhhh
Q psy12581        125 KLIRICMNEDPGKRPTFDMVLPILDKMK  152 (153)
Q Consensus       125 ~l~~~cl~~~p~~Rps~~~~l~~L~~~~  152 (153)
                      +.+..||..|++.|.|+.-+.+++..+.
T Consensus       477 et~EeCWDhDaeARLTA~Cv~eR~~~l~  504 (534)
T KOG3653|consen  477 ETIEECWDHDAEARLTAGCVEERMAELM  504 (534)
T ss_pred             HHHHHHcCCchhhhhhhHHHHHHHHHHh
Confidence            8999999999999999999999988764

>KOG0670|consensus

Probab=99.76  E-value=3e-19  Score=125.49  Aligned_cols=93  Identities=18%  Similarity=0.150  Sum_probs=77.2

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccc-cchhhcccccccccccCCcccCC-----cccCccccccCCCCCCcchhhHH
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDED-LTARINMADAQFSFQQRGRCYYP-----AWMSPEALQKKPGDRNLEACDMW   78 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~-~~~kl~~~d~g~~~~~~~~~~~~-----~~~~pe~~~~~~~~~~~~~~dv~   78 (153)
                      -+++++.|-..+|.|.+|+++||++.++ ...||+  |||.+......-.||     .|.+||++.+.++.   -..|+|
T Consensus       545 LflALklLK~c~vlHaDIKPDNiLVNE~k~iLKLC--DfGSA~~~~eneitPYLVSRFYRaPEIiLG~~yd---~~iD~W  619 (752)
T KOG0670|consen  545 LFLALKLLKKCGVLHADIKPDNILVNESKNILKLC--DFGSASFASENEITPYLVSRFYRAPEIILGLPYD---YPIDTW  619 (752)
T ss_pred             HHHHHHHHHhcCeeecccCccceEeccCcceeeec--cCccccccccccccHHHHHHhccCcceeecCccc---CCccce
Confidence            4788999999999999999999999876 457899  999987666655555     59999999987654   678999


Q ss_pred             HHHHHHHHHHhCCCCCCCCCchhh
Q psy12581         79 SFAVLLWELATREVPFADLTPMEV  102 (153)
Q Consensus        79 s~g~~~~~~~~g~~p~~~~~~~~~  102 (153)
                      |+||++||+.||+.-|.+......
T Consensus       620 SvgctLYElYtGkIlFpG~TNN~M  643 (752)
T KOG0670|consen  620 SVGCTLYELYTGKILFPGRTNNQM  643 (752)
T ss_pred             eeceeeEEeeccceecCCCCcHHH
Confidence            999999999999988877554443

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=99.75  E-value=5.7e-18  Score=121.89  Aligned_cols=138  Identities=13%  Similarity=0.047  Sum_probs=95.4

Q ss_pred             hHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccccC--------CcccCCcccCccccccCCCC---------
Q psy12581          7 VYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQR--------GRCYYPAWMSPEALQKKPGD---------   69 (153)
Q Consensus         7 ~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~--------~~~~~~~~~~pe~~~~~~~~---------   69 (153)
                      -++.|||++++.|+||++.||+++.++.+|+.  |||++....        ...+++.|++||.+......         
T Consensus       320 ~aL~~lH~~~ivHrDLKp~NILl~~~~~~kL~--DFGla~~~~~~~~~~~~~g~~tp~Y~aPE~l~~~~~~~~~~~~~~~  397 (507)
T PLN03224        320 TGLRKLHRIGIVHRDIKPENLLVTVDGQVKII--DFGAAVDMCTGINFNPLYGMLDPRYSPPEELVMPQSCPRAPAPAMA  397 (507)
T ss_pred             HHHHHHHHCCeecCCCchHhEEECCCCcEEEE--eCcCccccccCCccCccccCCCcceeChhhhcCCCCCCccchhhhh
Confidence            36789999999999999999999999988888  999884321        12346889999987532110         


Q ss_pred             ----------CCcchhhHHHHHHHHHHHHhCCC-CCCCCCchhhhH-----------HHHhhccccCCCCCCCHHHHHHH
Q psy12581         70 ----------RNLEACDMWSFAVLLWELATREV-PFADLTPMEVGM-----------KVALEGLRITIPPGISSHLSKLI  127 (153)
Q Consensus        70 ----------~~~~~~dv~s~g~~~~~~~~g~~-p~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~l~  127 (153)
                                ......|+||+|+++++++++.. |+..........           ...............+....+++
T Consensus       398 ~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~~~~~~~~~~~~d~~s~~~~dLi  477 (507)
T PLN03224        398 ALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRMYKGQKYDFSLLDRNKEAGWDLA  477 (507)
T ss_pred             hhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHhhcccCCCcccccccChHHHHHH
Confidence                      01124699999999999999865 654321111100           00111112222345678899999


Q ss_pred             HHHhcCCC---CCCCCHHHHHH
Q psy12581        128 RICMNEDP---GKRPTFDMVLP  146 (153)
Q Consensus       128 ~~cl~~~p---~~Rps~~~~l~  146 (153)
                      .+||..+|   .+|+|++++++
T Consensus       478 ~~LL~~~~~~~~~RlSa~eaL~  499 (507)
T PLN03224        478 CKLITKRDQANRGRLSVGQALS  499 (507)
T ss_pred             HHHhccCCCCcccCCCHHHHhC
Confidence            99999766   68999999885

>KOG0607|consensus

Probab=99.75  E-value=1.6e-18  Score=115.68  Aligned_cols=141  Identities=21%  Similarity=0.228  Sum_probs=100.4

Q ss_pred             cchhhHHhhhhcCCCCCCCeeeeeeeecccc---chhhcccccccc--ccc------------CCcccCCcccCcccccc
Q psy12581          3 KKKIVYSFYLNSKKSKTSNAFLFCCQIDEDL---TARINMADAQFS--FQQ------------RGRCYYPAWMSPEALQK   65 (153)
Q Consensus         3 ~~~~~~~~~lh~~~i~~~ni~~~~~~~~~~~---~~kl~~~d~g~~--~~~------------~~~~~~~~~~~pe~~~~   65 (153)
                      .|.+.++.|||.+||-|+|+++.||+-.+-.   -+|++  ||.++  ...            .+.+|+..|||||++.-
T Consensus       183 kdia~aLdFlH~kgIAHRDlKPENiLC~~pn~vsPvKiC--DfDLgSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~  260 (463)
T KOG0607|consen  183 KDIASALDFLHTKGIAHRDLKPENILCESPNKVSPVKIC--DFDLGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDV  260 (463)
T ss_pred             HHHHHHHHHHhhcCcccccCCccceeecCCCCcCceeee--ccccccccccCCCCCCCCCccccCcccchhhcchhHHhh
Confidence            3567889999999999999999998865433   35777  77654  221            23477788999998753


Q ss_pred             CC--CCCCcchhhHHHHHHHHHHHHhCCCCCCCC-------Cch---hhhH----HHHhhccccCCCC----CCCHHHHH
Q psy12581         66 KP--GDRNLEACDMWSFAVLLWELATREVPFADL-------TPM---EVGM----KVALEGLRITIPP----GISSHLSK  125 (153)
Q Consensus        66 ~~--~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~-------~~~---~~~~----~~~~~~~~~~~~~----~~~~~~~~  125 (153)
                      ..  ...+..+.|.||+|+++|-|++|.+||.+.       +..   ...+    ..++++ ..++|.    .++.+..+
T Consensus       261 fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~Cr~CQ~~LFesIQEG-kYeFPdkdWahIS~eakd  339 (463)
T KOG0607|consen  261 FVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFESIQEG-KYEFPDKDWAHISSEAKD  339 (463)
T ss_pred             hccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccCCCccHHHHHHHHHHHhcc-CCcCChhhhHHhhHHHHH
Confidence            21  123568899999999999999999999652       111   1111    122222 333443    36889999


Q ss_pred             HHHHHhcCCCCCCCCHHHHHH
Q psy12581        126 LIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus       126 l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      +++.++..++.+|.++.++++
T Consensus       340 lisnLlvrda~~rlsa~~vln  360 (463)
T KOG0607|consen  340 LISNLLVRDAKQRLSAAQVLN  360 (463)
T ss_pred             HHHHHHhccHHhhhhhhhccC
Confidence            999999999999999988775

>KOG0664|consensus

Probab=99.73  E-value=1.8e-18  Score=113.47  Aligned_cols=136  Identities=21%  Similarity=0.241  Sum_probs=100.0

Q ss_pred             HHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc--------CCcccCCcccCccccccCCCCCCcchhhHHH
Q psy12581          8 YSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ--------RGRCYYPAWMSPEALQKKPGDRNLEACDMWS   79 (153)
Q Consensus         8 ~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~--------~~~~~~~~~~~pe~~~~~~~~~~~~~~dv~s   79 (153)
                      .++|||+.+|.|+||++.|.+++.+-..|++  |||++...        +...-|-+|.+||++.+.+  .++...|+||
T Consensus       168 GLKYLHsA~ILHRDIKPGNLLVNSNCvLKIC--DFGLARvee~d~~~hMTqEVVTQYYRAPEiLMGaR--hYs~AvDiWS  243 (449)
T KOG0664|consen  168 GLKYLHTANILHRDIKPGNLLVNSNCILKIC--DFGLARTWDQRDRLNMTHEVVTQYYRAPELLMGAR--RYTGAVDIWS  243 (449)
T ss_pred             hhHHHhhcchhhccCCCccEEeccCceEEec--ccccccccchhhhhhhHHHHHHHHhccHHHhhcch--hhcCccceeh
Confidence            5789999999999999999999999999999  99998432        2335677999999998754  4568899999


Q ss_pred             HHHHHHHHHhCCCCCCCCCchhhhHHHH-----------------------hhccccC---------CCCCCCHHHHHHH
Q psy12581         80 FAVLLWELATREVPFADLTPMEVGMKVA-----------------------LEGLRIT---------IPPGISSHLSKLI  127 (153)
Q Consensus        80 ~g~~~~~~~~g~~p~~~~~~~~~~~~~~-----------------------~~~~~~~---------~~~~~~~~~~~l~  127 (153)
                      .||++.|++..+.-|....+.+++..+.                       +.+.+.+         .+..-..+...++
T Consensus       244 VGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~ACEGAk~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~  323 (449)
T KOG0664|consen  244 VGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYACEGAKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLL  323 (449)
T ss_pred             hhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHHHhhhhHHHhhccCCCCCCccceeeecCCcccchHHHHHH
Confidence            9999999998777676554444333221                       1111111         1122334677788


Q ss_pred             HHHhcCCCCCCCCHHHHHHH
Q psy12581        128 RICMNEDPGKRPTFDMVLPI  147 (153)
Q Consensus       128 ~~cl~~~p~~Rps~~~~l~~  147 (153)
                      .+++.+||++|.+.++.+..
T Consensus       324 ~~~l~~d~dkris~~~A~~~  343 (449)
T KOG0664|consen  324 QKLLHFDPDKRISVEEALQH  343 (449)
T ss_pred             HHHhCCCCcccccHhhhccc
Confidence            89999999999998887654

>KOG4250|consensus

Probab=99.73  E-value=9.3e-18  Score=121.16  Aligned_cols=146  Identities=19%  Similarity=0.260  Sum_probs=99.5

Q ss_pred             chhhHHhhhhcCCCCCCCeeeeeeeec--cccchhhccccccccccc------CCcccCCcccCccccccCCCCCCcchh
Q psy12581          4 KKIVYSFYLNSKKSKTSNAFLFCCQID--EDLTARINMADAQFSFQQ------RGRCYYPAWMSPEALQKKPGDRNLEAC   75 (153)
Q Consensus         4 ~~~~~~~~lh~~~i~~~ni~~~~~~~~--~~~~~kl~~~d~g~~~~~------~~~~~~~~~~~pe~~~~~~~~~~~~~~   75 (153)
                      |...++.|||+++|.|+||++.||.+-  .+|..-.+++|||.|...      .+..||..|++||.....  ..++...
T Consensus       128 d~~~al~~LrEn~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~Arel~d~s~~~S~vGT~~YLhPel~E~q--~~y~~tV  205 (732)
T KOG4250|consen  128 DLVSALRHLRENGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAARELDDNSLFTSLVGTEEYLHPELYERQ--KKYTATV  205 (732)
T ss_pred             HHHHHHHHHHHcCceeccCCCCcEEEeecCCCceEEeeecccccccCCCCCeeeeecCchhhcChHHHhhc--cCcCcee
Confidence            345678999999999999999888764  445444445599999554      345899999999998842  2455789


Q ss_pred             hHHHHHHHHHHHHhCCCCCCCCCchh----hhHHHHhhc-------------------cccCCCCCCCH----HHHHHHH
Q psy12581         76 DMWSFAVLLWELATREVPFADLTPME----VGMKVALEG-------------------LRITIPPGISS----HLSKLIR  128 (153)
Q Consensus        76 dv~s~g~~~~~~~~g~~p~~~~~~~~----~~~~~~~~~-------------------~~~~~~~~~~~----~~~~l~~  128 (153)
                      |.||||+++|+.+||..||-......    ....+..+.                   ..++.|...+.    .+-.++.
T Consensus       206 DLWS~GvtlY~caTG~lPF~p~~~pk~~~~~~~~~~tkkp~~v~i~~~~~eNgpv~~s~~lP~p~~Ls~~l~~~~~kwLa  285 (732)
T KOG4250|consen  206 DLWSFGVTLYECATGELPFIPFGGPKNNKEIMWHIITKKPSGVAIGAQEEENGPVEWSSTLPQPNHLSRGLATRLTKWLA  285 (732)
T ss_pred             ehhhhhhHHHHHhccCCCCCcCCCccccchhhhhhhccCCCceeEeeecccCCceeeeccCCCcccccHHHHhhhhHHHH
Confidence            99999999999999999985433221    222221111                   11223333343    3556788


Q ss_pred             HHhcCCCCCCC--CHHHHHHHHhhh
Q psy12581        129 ICMNEDPGKRP--TFDMVLPILDKM  151 (153)
Q Consensus       129 ~cl~~~p~~Rp--s~~~~l~~L~~~  151 (153)
                      .+|..++.+|.  .+.+....+..|
T Consensus       286 ~~L~~~~~~~~~~~~~~~Fa~~~dI  310 (732)
T KOG4250|consen  286 SMLEWNPRKRGHEGFDRFFAEVDDI  310 (732)
T ss_pred             HHHhhhHHHhCCCCcchHHHHHHHH
Confidence            89999999998  666666555544

>KOG1151|consensus

Probab=99.71  E-value=7.4e-18  Score=117.03  Aligned_cols=127  Identities=17%  Similarity=0.199  Sum_probs=86.6

Q ss_pred             CCCCCCCeeeeeeeeccccchhhccccccccccc--------------CCcccCCcccCccccccC-CCCCCcchhhHHH
Q psy12581         15 KKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ--------------RGRCYYPAWMSPEALQKK-PGDRNLEACDMWS   79 (153)
Q Consensus        15 ~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~--------------~~~~~~~~~~~pe~~~~~-~~~~~~~~~dv~s   79 (153)
                      -|++|+||++.|  -+.-|.+|+.  |||++.-+              ....||.+|++||.+.-. .....+.+.||||
T Consensus       594 YDLKPgNILLv~--GtacGeIKIT--DFGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWS  669 (775)
T KOG1151|consen  594 YDLKPGNILLVN--GTACGEIKIT--DFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWS  669 (775)
T ss_pred             eccCCccEEEec--CcccceeEee--ecchhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEe
Confidence            567777776521  0233555665  99998322              334789999999987532 2235678999999


Q ss_pred             HHHHHHHHHhCCCCCCCCC-chhhhHHH-Hh--hccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHH
Q psy12581         80 FAVLLWELATREVPFADLT-PMEVGMKV-AL--EGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVL  145 (153)
Q Consensus        80 ~g~~~~~~~~g~~p~~~~~-~~~~~~~~-~~--~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l  145 (153)
                      +|+++|..+.|+.||...- ...++... +.  .....+..+.++++..+|+++||+..-++|.+..++.
T Consensus       670 vGVIFyQClYGrKPFGhnqsQQdILqeNTIlkAtEVqFP~KPvVsseAkaFIRRCLaYRKeDR~DV~qLA  739 (775)
T KOG1151|consen  670 VGVIFYQCLYGRKPFGHNQSQQDILQENTILKATEVQFPPKPVVSSEAKAFIRRCLAYRKEDRIDVQQLA  739 (775)
T ss_pred             eehhhhhhhccCCCCCCchhHHHHHhhhchhcceeccCCCCCccCHHHHHHHHHHHHhhhhhhhhHHHHc
Confidence            9999999999999996543 22222221 11  1223344456889999999999999999998877664

>KOG4158|consensus

Probab=99.70  E-value=7e-17  Score=110.81  Aligned_cols=140  Identities=20%  Similarity=0.260  Sum_probs=107.5

Q ss_pred             HhhhhcCCCCCCCeeeeeeee--ccccchhhcccccccccccC-------------CcccCCcccCccccccCCCCC---
Q psy12581          9 SFYLNSKKSKTSNAFLFCCQI--DEDLTARINMADAQFSFQQR-------------GRCYYPAWMSPEALQKKPGDR---   70 (153)
Q Consensus         9 ~~~lh~~~i~~~ni~~~~~~~--~~~~~~kl~~~d~g~~~~~~-------------~~~~~~~~~~pe~~~~~~~~~---   70 (153)
                      ..|||++++-|+|++.+||++  |+++.+.+++.|||.+....             ...|....|+||+....+...   
T Consensus       354 v~hL~~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~PGp~avv  433 (598)
T KOG4158|consen  354 VTHLHKHGVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATAVPGPNAVV  433 (598)
T ss_pred             HHHHHHccchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhhcCCCCceee
Confidence            467888899999999888877  67788888888999874332             235667889999986554322   


Q ss_pred             CcchhhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHH
Q psy12581         71 NLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPIL  148 (153)
Q Consensus        71 ~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L  148 (153)
                      --.++|.|+.|.+.||+++...||++...........++...+..|..+++.+++++...|+.||++|++..-+.+.|
T Consensus       434 ny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r~Yqe~qLPalp~~vpp~~rqlV~~lL~r~pskRvsp~iAANvl  511 (598)
T KOG4158|consen  434 NYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDTRTYQESQLPALPSRVPPVARQLVFDLLKRDPSKRVSPNIAANVL  511 (598)
T ss_pred             ccchhhhhhhhhhHHHHhccCCcccccchheechhhhhhhhCCCCcccCChHHHHHHHHHhcCCccccCCccHHHhHH
Confidence            125789999999999999999999875444433334445556778899999999999999999999999866554443

>KOG0606|consensus

Probab=99.70  E-value=3.8e-17  Score=122.63  Aligned_cols=130  Identities=19%  Similarity=0.257  Sum_probs=110.3

Q ss_pred             hhHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccc----------------------cCCcccCCcccCcccc
Q psy12581          6 IVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQ----------------------QRGRCYYPAWMSPEAL   63 (153)
Q Consensus         6 ~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~----------------------~~~~~~~~~~~~pe~~   63 (153)
                      +.+.+|+|+.+|.|+++.++|.+|..-|++|+.  |||++..                      ....|+|+.|.+||++
T Consensus       153 vla~Eylh~ygivhrdlkpdnllIT~mGhiKlT--DfgLsk~GLms~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVi  230 (1205)
T KOG0606|consen  153 VLAVEYLHSYGIVHRDLKPDNLLITSMGHIKLT--DFGLSKKGLMSLATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVI  230 (1205)
T ss_pred             hHHhHhhccCCeecCCCCCCcceeeeccccccc--chhhhhhhhhhccchhhhcchHHHHHHhhhccccCCccccChhhh
Confidence            467899999999999999999999999999998  9998721                      1345999999999999


Q ss_pred             ccCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhcc-ccCCCCCCCHHHHHHHHHHhcCCCCCCCC
Q psy12581         64 QKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGL-RITIPPGISSHLSKLIRICMNEDPGKRPT  140 (153)
Q Consensus        64 ~~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~cl~~~p~~Rps  140 (153)
                      ..+   .++...|.|++|+++|+++-|..||.+..+++.+-..+.... .++-....++++++++.++|+.+|..|.-
T Consensus       231 lrq---gygkpvdwwamGiIlyeFLVgcvpffGdtpeelfg~visd~i~wpE~dea~p~Ea~dli~~LL~qnp~~Rlg  305 (1205)
T KOG0606|consen  231 LRQ---GYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEWPEEDEALPPEAQDLIEQLLRQNPLCRLG  305 (1205)
T ss_pred             hhh---ccCCCccHHHHHHHHHHHheeeeeccCCCHHHHHhhhhhhhccccccCcCCCHHHHHHHHHHHHhChHhhcc
Confidence            865   344789999999999999999999999998888877666544 33445567889999999999999999963

>KOG1345|consensus

Probab=99.69  E-value=2.8e-17  Score=107.57  Aligned_cols=138  Identities=15%  Similarity=0.209  Sum_probs=97.1

Q ss_pred             hHHhhhhcCCCCCCCeeeeeeee-ccccchhhcccccccccccCCc----ccCCcccCccccccCCCCC--CcchhhHHH
Q psy12581          7 VYSFYLNSKKSKTSNAFLFCCQI-DEDLTARINMADAQFSFQQRGR----CYYPAWMSPEALQKKPGDR--NLEACDMWS   79 (153)
Q Consensus         7 ~~~~~lh~~~i~~~ni~~~~~~~-~~~~~~kl~~~d~g~~~~~~~~----~~~~~~~~pe~~~~~~~~~--~~~~~dv~s   79 (153)
                      =+..|+|++++.|+||++.||+| +.+.. +|++.|||.+...+..    -.+..|-+||.+...+.+.  ..+.+|+|.
T Consensus       132 SAi~fMHsknlVHRdlK~eNiLif~~df~-rvKlcDFG~t~k~g~tV~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~Wq  210 (378)
T KOG1345|consen  132 SAIEFMHSKNLVHRDLKAENILIFDADFY-RVKLCDFGLTRKVGTTVKYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQ  210 (378)
T ss_pred             HHHHHhhccchhhcccccceEEEecCCcc-EEEeeecccccccCceehhhhhhcccCCcHHHhhccccceEecccccchh
Confidence            36789999999999999999988 34433 4444499998655433    3456788998876543332  357899999


Q ss_pred             HHHHHHHHHhCCCCCCCCCchhhhH---HHHhhccccCCCC---CCCHHHHHHHHHHhcCCCCCCCCHHHHH
Q psy12581         80 FAVLLWELATREVPFADLTPMEVGM---KVALEGLRITIPP---GISSHLSKLIRICMNEDPGKRPTFDMVL  145 (153)
Q Consensus        80 ~g~~~~~~~~g~~p~~~~~~~~~~~---~~~~~~~~~~~~~---~~~~~~~~l~~~cl~~~p~~Rps~~~~l  145 (153)
                      ||++++.+++|..||........-+   ....++..+..|.   .+++.+..+.++-+..++.+|....++.
T Consensus       211 fGIi~f~cltG~~PWQka~~~d~~Y~~~~~w~~rk~~~~P~~F~~fs~~a~r~Fkk~lt~~~~drcki~~~k  282 (378)
T KOG1345|consen  211 FGIIFFYCLTGKFPWQKASIMDKPYWEWEQWLKRKNPALPKKFNPFSEKALRLFKKSLTPRFKDRCKIWTAK  282 (378)
T ss_pred             eeeeeeeeecCCCcchhhhccCchHHHHHHHhcccCccCchhhcccCHHHHHHHHHhcCCcccccchhHHHH
Confidence            9999999999999997543332221   2233333444454   3678889999999999999995544443

>KOG0662|consensus

Probab=99.68  E-value=1.4e-16  Score=98.91  Aligned_cols=135  Identities=15%  Similarity=0.094  Sum_probs=102.1

Q ss_pred             HHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccccC-------CcccCCcccCccccccCCCCCCcchhhHHHH
Q psy12581          8 YSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQR-------GRCYYPAWMSPEALQKKPGDRNLEACDMWSF   80 (153)
Q Consensus         8 ~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~-------~~~~~~~~~~pe~~~~~~~~~~~~~~dv~s~   80 (153)
                      .+.|+|++++.|+++++.|.+|..+|..|+.  |||++..-+       ...-|.+|.+|.++.+.+  .++...|+||-
T Consensus       113 gl~fchshnvlhrdlkpqnllin~ngelkla--dfglarafgipvrcysaevvtlwyrppdvlfgak--ly~tsidmwsa  188 (292)
T KOG0662|consen  113 GLGFCHSHNVLHRDLKPQNLLINRNGELKLA--DFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAK--LYSTSIDMWSA  188 (292)
T ss_pred             hhhhhhhhhhhhccCCcceEEeccCCcEEec--ccchhhhcCCceEeeeceeeeeeccCcceeeeee--hhccchHhhhc
Confidence            3568899999999999999999999999999  999985432       234578899999988753  35578899999


Q ss_pred             HHHHHHHHh-CCCCCCCCCchhhhHHHHhhcccc------------------CCC---------CCCCHHHHHHHHHHhc
Q psy12581         81 AVLLWELAT-REVPFADLTPMEVGMKVALEGLRI------------------TIP---------PGISSHLSKLIRICMN  132 (153)
Q Consensus        81 g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~------------------~~~---------~~~~~~~~~l~~~cl~  132 (153)
                      ||++.|+.. |.+-|.+.+...+..++...-..+                  -+|         +..+...++++++++.
T Consensus       189 gcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~wps~t~lpdyk~yp~ypattswsqivp~lns~grdllqkll~  268 (292)
T KOG0662|consen  189 GCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPSMTKLPDYKPYPIYPATTSWSQIVPKLNSTGRDLLQKLLK  268 (292)
T ss_pred             chHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCCccccCCCCcccCCccccchHHHHhhhhcchhHHHHHHHhc
Confidence            999999976 777788777666665543211110                  011         1223467899999999


Q ss_pred             CCCCCCCCHHHHHH
Q psy12581        133 EDPGKRPTFDMVLP  146 (153)
Q Consensus       133 ~~p~~Rps~~~~l~  146 (153)
                      -+|.+|.+++.+++
T Consensus       269 cnp~qrisaeaalq  282 (292)
T KOG0662|consen  269 CNPAQRISAEAALQ  282 (292)
T ss_pred             cCcccccCHHHHhc
Confidence            99999999998775

>KOG0668|consensus

Probab=99.68  E-value=3.1e-16  Score=100.56  Aligned_cols=137  Identities=19%  Similarity=0.161  Sum_probs=97.3

Q ss_pred             hHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc------CCcccCCcccCccccccCCCCCCcchhhHHHH
Q psy12581          7 VYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ------RGRCYYPAWMSPEALQKKPGDRNLEACDMWSF   80 (153)
Q Consensus         7 ~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~------~~~~~~~~~~~pe~~~~~~~~~~~~~~dv~s~   80 (153)
                      -++.|+|++||.|+++++.|+.||... -|+.+.|+|++..-      ..+..+..|..||.+...+  .+.-+-|+||+
T Consensus       143 kALdyCHS~GImHRDVKPhNvmIdh~~-rkLrlIDWGLAEFYHp~~eYnVRVASRyfKGPELLVdy~--~YDYSLD~WS~  219 (338)
T KOG0668|consen  143 KALDYCHSMGIMHRDVKPHNVMIDHEL-RKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDYQ--MYDYSLDMWSL  219 (338)
T ss_pred             HHHhHHHhcCcccccCCcceeeechhh-ceeeeeecchHhhcCCCceeeeeeehhhcCCchheeech--hccccHHHHHH
Confidence            478999999999999999999999763 34556699998322      2335667889999987643  23356899999


Q ss_pred             HHHHHHHHhCCCCC-CCCCchhhhHHHHh-----------hccccC------------------------CCCCCCHHHH
Q psy12581         81 AVLLWELATREVPF-ADLTPMEVGMKVAL-----------EGLRIT------------------------IPPGISSHLS  124 (153)
Q Consensus        81 g~~~~~~~~g~~p~-~~~~~~~~~~~~~~-----------~~~~~~------------------------~~~~~~~~~~  124 (153)
                      ||.+..++-.+.|| .+.+...++.++..           ..+...                        ...-.++++.
T Consensus       220 GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Yl~KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peai  299 (338)
T KOG0668|consen  220 GCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAYLNKYQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAI  299 (338)
T ss_pred             HHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHHHHHHHccCCChhHhhHhhccccccHHHhCCccccccCChHHH
Confidence            99999998766665 55444443332210           000000                        0112458999


Q ss_pred             HHHHHHhcCCCCCCCCHHHHHH
Q psy12581        125 KLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus       125 ~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      +++.++|..|-..|+|+.|++.
T Consensus       300 DlldklLrYDHqeRlTakEam~  321 (338)
T KOG0668|consen  300 DLLDKLLRYDHQERLTAKEAMA  321 (338)
T ss_pred             HHHHHHHhhccccccchHHHhc
Confidence            9999999999999999999874

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=99.68  E-value=3.3e-16  Score=117.07  Aligned_cols=94  Identities=28%  Similarity=0.372  Sum_probs=75.6

Q ss_pred             cccCCcccCccccccCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhcccc-CCCCCCCHHHHHHHHH
Q psy12581         51 RCYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRI-TIPPGISSHLSKLIRI  129 (153)
Q Consensus        51 ~~~~~~~~~pe~~~~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~  129 (153)
                      ..||+.|++||.+.+..   ++.++|+||+|+++||+++|+.||.+.........++.....+ ......+..+.+++..
T Consensus       540 ~vGT~~Y~APE~l~~~~---~~~~~DiwSlG~il~ElltG~~pf~~~~~~~~~~~il~~~~~~p~~~~~~~~~~~~~l~~  616 (669)
T cd05610         540 ILGTPDYLAPELLLGKP---HGPAVDWWALGVCLFEFLTGIPPFNDETPQQVFQNILNRDIPWPEGEEKLSVNAQNAIEI  616 (669)
T ss_pred             eeeCccccCHHHcCCCC---CCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCCCcccccCCHHHHHHHHH
Confidence            47899999999998643   4588999999999999999999998877666666555443322 2233567889999999


Q ss_pred             HhcCCCCCCCCHHHHHHH
Q psy12581        130 CMNEDPGKRPTFDMVLPI  147 (153)
Q Consensus       130 cl~~~p~~Rps~~~~l~~  147 (153)
                      ||..+|.+||++.++++.
T Consensus       617 lL~~dP~~R~ta~e~l~h  634 (669)
T cd05610         617 LLTMDPTKRAGLKELKQH  634 (669)
T ss_pred             HcccChhHCcCHHHHHhC
Confidence            999999999999999864

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=99.67  E-value=1.6e-16  Score=102.41  Aligned_cols=105  Identities=30%  Similarity=0.384  Sum_probs=87.2

Q ss_pred             hhHHhhhhcCCCCCCCeeeeeeeecc-ccchhhcccccccccccCC-------cccCCcccCccccccCCCCCCcchhhH
Q psy12581          6 IVYSFYLNSKKSKTSNAFLFCCQIDE-DLTARINMADAQFSFQQRG-------RCYYPAWMSPEALQKKPGDRNLEACDM   77 (153)
Q Consensus         6 ~~~~~~lh~~~i~~~ni~~~~~~~~~-~~~~kl~~~d~g~~~~~~~-------~~~~~~~~~pe~~~~~~~~~~~~~~dv   77 (153)
                      .-+..+||++++.|+||.+.||+++. ++.+++.  |||.+.....       ..+...|++||.....  ...+.+.|+
T Consensus       102 ~~~l~~lh~~~~~H~dl~~~ni~~~~~~~~~~l~--d~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~--~~~~~~~D~  177 (215)
T cd00180         102 LEGLEYLHSNGIIHRDLKPENILLDSDNGKVKLA--DFGLSKLLTSDKSLLKTIVGTPAYMAPEVLLGK--GYYSEKSDI  177 (215)
T ss_pred             HHHHHHHHhCCeeccCCCHhhEEEeCCCCcEEEe--cCCceEEccCCcchhhcccCCCCccChhHhccc--CCCCchhhh
Confidence            34678999999999999999999998 7877777  9998743322       3467789999988653  134478999


Q ss_pred             HHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHH
Q psy12581         78 WSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPI  147 (153)
Q Consensus        78 ~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~  147 (153)
                      |++|++++++                                 ..+.+++.+|+..+|++||++.++++.
T Consensus       178 ~~lg~~~~~l---------------------------------~~~~~~l~~~l~~~p~~R~~~~~l~~~  214 (215)
T cd00180         178 WSLGVILYEL---------------------------------PELKDLIRKMLQKDPEKRPSAKEILEH  214 (215)
T ss_pred             HHHHHHHHHH---------------------------------HHHHHHHHHHhhCCcccCcCHHHHhhC
Confidence            9999999998                                 688999999999999999999998864

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>KOG0590|consensus

Probab=99.64  E-value=1.2e-16  Score=117.36  Aligned_cols=135  Identities=19%  Similarity=0.197  Sum_probs=102.7

Q ss_pred             HHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccc-----------cCCcccCCcccCccccccCCCCCCcchhh
Q psy12581          8 YSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQ-----------QRGRCYYPAWMSPEALQKKPGDRNLEACD   76 (153)
Q Consensus         8 ~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~-----------~~~~~~~~~~~~pe~~~~~~~~~~~~~~d   76 (153)
                      ..+|+|+.|+.|+++++.|++++.+|.+|+.  |||.+..           ..+.+|...|+|||.+.+..+..  ...|
T Consensus       432 Gv~y~h~~GiahrdlK~enll~~~~g~lki~--Dfg~~~vf~~~~e~~~~~~~g~~gS~pY~apE~~~~~~ydp--r~vD  507 (601)
T KOG0590|consen  432 GVKYLHSMGLAHRDLKLENLLVTENGILKII--DFGAASVFRYPWEKNIHESSGIVGSDPYLAPEVLTGKEYDP--RAVD  507 (601)
T ss_pred             HHHHHHhcCceeccCccccEEEecCCceEEe--ecCcceeeccCcchhhhhhcCcccCCcCcCcccccccccCc--chhh
Confidence            3589999999999999999999999999988  9998721           23457889999999998765542  5689


Q ss_pred             HHHHHHHHHHHHhCCCCCCCCCchhhhH-HHH-hhcccc-----CCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581         77 MWSFAVLLWELATREVPFADLTPMEVGM-KVA-LEGLRI-----TIPPGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus        77 v~s~g~~~~~~~~g~~p~~~~~~~~~~~-~~~-~~~~~~-----~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      +|+.|+++..|.+|+.||......+... ... ..+...     ..-...+...+.++.++|+.+|.+|.|+++|++
T Consensus       508 iwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~  584 (601)
T KOG0590|consen  508 VWSCGIIYICMILGRFPWKVAKKSDNSFKTNNYSDQRNIFEGPNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILN  584 (601)
T ss_pred             hhhccceEEEEecCCCccccccccccchhhhccccccccccChHHHHHhchhhHHHHHHHHccCChhheecHHHHhh
Confidence            9999999999999999996544333221 100 000000     111235678899999999999999999999975

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=99.63  E-value=1.5e-16  Score=106.62  Aligned_cols=123  Identities=17%  Similarity=0.135  Sum_probs=81.6

Q ss_pred             HHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccccCC----cccCCcccCccccccC-----CCCCCcchhhHH
Q psy12581          8 YSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQRG----RCYYPAWMSPEALQKK-----PGDRNLEACDMW   78 (153)
Q Consensus         8 ~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~~----~~~~~~~~~pe~~~~~-----~~~~~~~~~dv~   78 (153)
                      ...+||++|+.|+||.+.|++++.+|.+.+.  ||+.....+.    ...+..|.+||.....     ..-.++.+.|.|
T Consensus       157 lvA~Lh~~GlVHgdi~~~nfll~~~G~v~Lg--~F~~~~r~g~~~~~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW  234 (288)
T PF14531_consen  157 LVANLHSYGLVHGDIKPENFLLDQDGGVFLG--DFSSLVRAGTRYRCSEFPVAFTPPELESCAGQFGQNNAPYTFATDAW  234 (288)
T ss_dssp             HHHHHHHTTEEEST-SGGGEEE-TTS-EEE----GGGEEETTEEEEGGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHH
T ss_pred             HHHHHhhcceEecccceeeEEEcCCCCEEEc--ChHHHeecCceeeccCCCcccCChhhhhhhcccCcccceeeeccCHH
Confidence            4568999999999999999999999988888  9987643322    2344678899876432     111345789999


Q ss_pred             HHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCC
Q psy12581         79 SFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKR  138 (153)
Q Consensus        79 s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~R  138 (153)
                      ++|+++|.++++..||...........      .......++..++.++.++|+.+|.+|
T Consensus       235 ~LG~~ly~lWC~~lPf~~~~~~~~~~~------~f~~C~~~Pe~v~~LI~~lL~~~~~~R  288 (288)
T PF14531_consen  235 QLGITLYSLWCGRLPFGLSSPEADPEW------DFSRCRDMPEPVQFLIRGLLQRNPEDR  288 (288)
T ss_dssp             HHHHHHHHHHHSS-STCCCGGGSTSGG------GGTTSS---HHHHHHHHHHT-SSGGGS
T ss_pred             HHHHHHHHHHHccCCCCCCCccccccc------cchhcCCcCHHHHHHHHHHccCCcccC
Confidence            999999999999999976543322111      222233688899999999999999987

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=99.56  E-value=6.1e-15  Score=96.27  Aligned_cols=102  Identities=23%  Similarity=0.191  Sum_probs=78.2

Q ss_pred             hhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc--------CCcccCCcccCccccccCCCCCCcchhhH
Q psy12581          6 IVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ--------RGRCYYPAWMSPEALQKKPGDRNLEACDM   77 (153)
Q Consensus         6 ~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~--------~~~~~~~~~~~pe~~~~~~~~~~~~~~dv   77 (153)
                      .-+..+||.+++.|+|+.+.|++++.++.+++.  |||.+...        ....+...|++||...  ....++.++|+
T Consensus       108 ~~~l~~lh~~~i~h~di~~~ni~v~~~~~~~l~--d~g~~~~~~~~~~~~~~~~~~~~~~~~pe~~~--~~~~~~~~~Dv  183 (225)
T smart00221      108 LEALEYLHSLGIVHRDLKPENILLGMDGLVKLA--DFGLARFIHRDLAALLKTVKGTPFYLAPEVLL--GGKGYGEAVDI  183 (225)
T ss_pred             HHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEe--eCceeeEecCcccccccceeccCCcCCHhHhc--CCCCCCchhhH
Confidence            345689999999999999999999999877777  99987432        2335667899999884  12345578999


Q ss_pred             HHHHHHHHHHHhCCCCCCC-CCchhhhHHHHhhcc
Q psy12581         78 WSFAVLLWELATREVPFAD-LTPMEVGMKVALEGL  111 (153)
Q Consensus        78 ~s~g~~~~~~~~g~~p~~~-~~~~~~~~~~~~~~~  111 (153)
                      |++|++++++++|+.||.+ .+........+..+.
T Consensus       184 ~~lG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~  218 (225)
T smart00221      184 WSLGVILYELLWGPEPFSGEGEFTSLLSDVWSFGV  218 (225)
T ss_pred             HHHHHHHHHHHHCCCCccccchhHHHHHHHHhcCC
Confidence            9999999999999999977 454444444444443

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>KOG1023|consensus

Probab=99.56  E-value=9e-15  Score=103.96  Aligned_cols=146  Identities=20%  Similarity=0.267  Sum_probs=105.8

Q ss_pred             hhhHHhhhhcCCC-CCCCeeeeeeeeccccchhhcccccccccccCC---------cccCCcccCccccccCCCCC----
Q psy12581          5 KIVYSFYLNSKKS-KTSNAFLFCCQIDEDLTARINMADAQFSFQQRG---------RCYYPAWMSPEALQKKPGDR----   70 (153)
Q Consensus         5 ~~~~~~~lh~~~i-~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~~---------~~~~~~~~~pe~~~~~~~~~----   70 (153)
                      ..-.+.|||+.-+ .|+++..+||++|....+|+.  |||+......         ......|.+||.+.......    
T Consensus        57 i~~Gl~ylh~s~i~~hg~l~s~nClvd~~w~lklt--~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~  134 (484)
T KOG1023|consen   57 ISKGLAYLHNSPIGYHGALKSSNCLVDSRWVLKLT--DFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESA  134 (484)
T ss_pred             HHHHHHHHhcCcceeeeeeccccceeeeeEEEEec--hhhhcccccccccccccchhHHHHhccCHHHhccccccccccc
Confidence            3446789998777 899999999999999999998  9998743321         12334699999988643222    


Q ss_pred             CcchhhHHHHHHHHHHHHhCCCCCCCCCc----hhhhHHHHhhccccCCCC-----CCCHHHHHHHHHHhcCCCCCCCCH
Q psy12581         71 NLEACDMWSFAVLLWELATREVPFADLTP----MEVGMKVALEGLRITIPP-----GISSHLSKLIRICMNEDPGKRPTF  141 (153)
Q Consensus        71 ~~~~~dv~s~g~~~~~~~~g~~p~~~~~~----~~~~~~~~~~~~~~~~~~-----~~~~~~~~l~~~cl~~~p~~Rps~  141 (153)
                      .+.+.|+||+|++++|+++...||.....    .+....+...+..+..|.     ...+.+..++..||..+|+.||++
T Consensus       135 ~~~~gdiYs~~ii~~ei~~r~~~~~~~~~~~~~~eii~~~~~~~~~~~rP~i~~~~e~~~~l~~l~~~cw~e~P~~rPs~  214 (484)
T KOG1023|consen  135 LTQKGDIYSFGIIMYEILFRSGPFDLRNLVEDPDEIILRVKKGGSNPFRPSIELLNELPPELLLLVARCWEEIPEKRPSI  214 (484)
T ss_pred             ccccCCeehHHHHHHHHHhccCccccccccCChHHHHHHHHhcCCCCcCcchhhhhhcchHHHHHHHHhcccChhhCccH
Confidence            46789999999999999999999976322    223333222122222221     345578999999999999999999


Q ss_pred             HHHHHHHhhhh
Q psy12581        142 DMVLPILDKMK  152 (153)
Q Consensus       142 ~~~l~~L~~~~  152 (153)
                      +++-..+..+.
T Consensus       215 ~~i~~~~~~~~  225 (484)
T KOG1023|consen  215 EQIRSKLLTIN  225 (484)
T ss_pred             HHHHhhhhhhc
Confidence            99988776653

>KOG0603|consensus

Probab=99.54  E-value=3.3e-15  Score=107.01  Aligned_cols=124  Identities=21%  Similarity=0.282  Sum_probs=101.9

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccc---ccCCcccCCcccCccccccCCCCCCcchhhHHHHH
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSF---QQRGRCYYPAWMSPEALQKKPGDRNLEACDMWSFA   81 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~---~~~~~~~~~~~~~pe~~~~~~~~~~~~~~dv~s~g   81 (153)
                      -+++...+|..++..+++++.||+++.+|++++.  |||.+.   ..+..||+..||+||++.+     .....|.|++|
T Consensus       106 laLald~lh~l~iiyrd~k~enilld~~Ghi~~t--dfglske~v~~~~~cgt~eymApEI~~g-----h~~a~D~ws~g  178 (612)
T KOG0603|consen  106 LALALDHLHKLGIAYRDYKLENVLLLLEGHIKLT--DFGLSKEAVKEKIACGTYEYRAPEIING-----HLSAADWWSFG  178 (612)
T ss_pred             HHHHHhhcchhHHHHhcccccceeecccCccccC--CchhhhHhHhhhhcccchhhhhhHhhhc-----cCCcccchhhh
Confidence            3577889999999999999999999999999999  999983   2334499999999999883     22678999999


Q ss_pred             HHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCH
Q psy12581         82 VLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTF  141 (153)
Q Consensus        82 ~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~  141 (153)
                      ++.+++++|..||.+    +....+..  ..+..|...+..++.++..++..+|..|.-.
T Consensus       179 vl~felltg~~pf~~----~~~~~Il~--~~~~~p~~l~~~a~~~~~~l~~r~p~nrLg~  232 (612)
T KOG0603|consen  179 VLAFELLTGTLPFGG----DTMKRILK--AELEMPRELSAEARSLFRQLFKRNPENRLGA  232 (612)
T ss_pred             hhHHHHhhCCCCCch----HHHHHHhh--hccCCchhhhHHHHHHHHHHHhhCHHHHhcc
Confidence            999999999999977    33333332  2566788899999999999999999999743

>KOG1167|consensus

Probab=99.52  E-value=7.9e-15  Score=100.60  Aligned_cols=137  Identities=20%  Similarity=0.229  Sum_probs=94.8

Q ss_pred             hhHHhhhhcCCCCCCCeeeeeeeeccc-cchhhccccccccccc------------------------------------
Q psy12581          6 IVYSFYLNSKKSKTSNAFLFCCQIDED-LTARINMADAQFSFQQ------------------------------------   48 (153)
Q Consensus         6 ~~~~~~lh~~~i~~~ni~~~~~~~~~~-~~~kl~~~d~g~~~~~------------------------------------   48 (153)
                      ..++.++|+.||+|+||++.|++.+.. +.-.|.  |||++...                                    
T Consensus       142 l~Al~~~h~~GIvHRDiKpsNFL~n~~t~rg~Lv--DFgLA~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p  219 (418)
T KOG1167|consen  142 LKALAHLHKNGIVHRDIKPSNFLYNRRTQRGVLV--DFGLAQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKP  219 (418)
T ss_pred             HHHhhhhhccCccccCCCccccccccccCCceEE--echhHHHHHhhhhhhhhhhhhcccCCccccCcccccccccccCC
Confidence            457788999999999999999988743 444455  99988300                                    


Q ss_pred             ---------------CCcccCCcccCccccccCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCC-chhhhHHH------
Q psy12581         49 ---------------RGRCYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLT-PMEVGMKV------  106 (153)
Q Consensus        49 ---------------~~~~~~~~~~~pe~~~~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~-~~~~~~~~------  106 (153)
                                     ....||++|.+||++...+  .-+.+.|+||.|+++..++++..||.... +.....++      
T Consensus       220 ~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~--~QttaiDiws~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~  297 (418)
T KOG1167|consen  220 AGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCP--RQTTAIDIWSAGVILLSLLSRRYPFFKAKDDADALAEIATIFGS  297 (418)
T ss_pred             CCceeccCCCccceecccCCCCCCCchHHHhhcc--CcCCccceeeccceeehhhccccccccCccccchHHHHHHHhCh
Confidence                           1226889999999987643  44578999999999999999999884211 11000000      


Q ss_pred             ---------------Hh--------------------hccccCC--------CCCCCHHHHHHHHHHhcCCCCCCCCHHH
Q psy12581        107 ---------------AL--------------------EGLRITI--------PPGISSHLSKLIRICMNEDPGKRPTFDM  143 (153)
Q Consensus       107 ---------------~~--------------------~~~~~~~--------~~~~~~~~~~l~~~cl~~~p~~Rps~~~  143 (153)
                                     ++                    .-.....        ....+..+.+++.+|++.||.+|.|+++
T Consensus       298 ~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~~~q~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEe  377 (418)
T KOG1167|consen  298 AEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIYKSRQPNTEREIGSDVFPALLLDLLDKCLELNPQKRITAED  377 (418)
T ss_pred             HHHHHHhhcCCceeeeccccccccHHHHhchhccChhhcccccccceeeccccccccHHHHHHHHHHccCChhhcccHHH
Confidence                           00                    0000000        1123457889999999999999999999


Q ss_pred             HHH
Q psy12581        144 VLP  146 (153)
Q Consensus       144 ~l~  146 (153)
                      +++
T Consensus       378 ALk  380 (418)
T KOG1167|consen  378 ALK  380 (418)
T ss_pred             Hhc
Confidence            874

>KOG1152|consensus

Probab=99.45  E-value=1.3e-14  Score=103.61  Aligned_cols=85  Identities=14%  Similarity=0.122  Sum_probs=73.3

Q ss_pred             HHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccccC-----CcccCCcccCccccccCCCCCCcchhhHHHHHH
Q psy12581          8 YSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQR-----GRCYYPAWMSPEALQKKPGDRNLEACDMWSFAV   82 (153)
Q Consensus         8 ~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~-----~~~~~~~~~~pe~~~~~~~~~~~~~~dv~s~g~   82 (153)
                      ..++||..||+|++|+-.|++++.+|-+|+.  |||.+-...     ...||..|.|||++.+.++.  +...|+|++|+
T Consensus       682 gi~hlh~~~ivhrdikdenvivd~~g~~kli--dfgsaa~~ksgpfd~f~gtv~~aapevl~g~~y~--gk~qdiwalgi  757 (772)
T KOG1152|consen  682 GIKHLHDQGIVHRDIKDENVIVDSNGFVKLI--DFGSAAYTKSGPFDVFVGTVDYAAPEVLGGEKYL--GKPQDIWALGI  757 (772)
T ss_pred             ccccccccCceecccccccEEEecCCeEEEe--eccchhhhcCCCcceeeeeccccchhhhCCCccC--CCcchhhhhhh
Confidence            4578999999999999999999999999999  999984433     34799999999999987653  47789999999


Q ss_pred             HHHHHHhCCCCCCC
Q psy12581         83 LLWELATREVPFAD   96 (153)
Q Consensus        83 ~~~~~~~g~~p~~~   96 (153)
                      ++|.++....||+.
T Consensus       758 llytivykenpyyn  771 (772)
T KOG1152|consen  758 LLYTIVYKENPYYN  771 (772)
T ss_pred             eeeEEEeccCCCcC
Confidence            99999988888864

>KOG1240|consensus

Probab=99.42  E-value=2.3e-13  Score=103.38  Aligned_cols=130  Identities=14%  Similarity=-0.020  Sum_probs=90.2

Q ss_pred             HHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccc---c-----------CCcccCCcccCccccccC-------
Q psy12581          8 YSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQ---Q-----------RGRCYYPAWMSPEALQKK-------   66 (153)
Q Consensus         8 ~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~---~-----------~~~~~~~~~~~pe~~~~~-------   66 (153)
                      ++..+|..||.|+||+..||+|+.=+.+.+.  ||..-.-   .           .+...-.+|.|||.+...       
T Consensus       132 al~qcH~~gVcHGDIKsENILiTSWNW~~Lt--DFAsFKPtYLPeDNPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~  209 (1431)
T KOG1240|consen  132 ALSQCHKLGVCHGDIKSENILITSWNWLYLT--DFASFKPTYLPEDNPADFTFFFDTSRRRTCYIAPERFVSALGKTSVG  209 (1431)
T ss_pred             HHHHHHHcCccccccccceEEEeeechhhhh--cccccCCccCCCCCcccceEEEecCCceeeecChHhhhccccccccC
Confidence            5678899999999999999999988877776  7754310   0           112233589999987541       


Q ss_pred             -CCCCCcchhhHHHHHHHHHHHHh-CCCCCCCC------Cc-hhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCC
Q psy12581         67 -PGDRNLEACDMWSFAVLLWELAT-REVPFADL------TP-MEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGK  137 (153)
Q Consensus        67 -~~~~~~~~~dv~s~g~~~~~~~~-g~~p~~~~------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~  137 (153)
                       ..+..+++.|+||.||++.|+++ |+++|.-.      .. .......+.        .-.+...++++..|++.||++
T Consensus       210 q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LSQL~aYr~~~~~~~e~~Le--------~Ied~~~Rnlil~Mi~rdPs~  281 (1431)
T KOG1240|consen  210 QDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLSQLLAYRSGNADDPEQLLE--------KIEDVSLRNLILSMIQRDPSK  281 (1431)
T ss_pred             CcccccChhhhhhhhhHHHHHHHhcCCCcccHHHHHhHhccCccCHHHHHH--------hCcCccHHHHHHHHHccCchh
Confidence             11225688999999999999987 78877320      00 000011111        112447899999999999999


Q ss_pred             CCCHHHHHHH
Q psy12581        138 RPTFDMVLPI  147 (153)
Q Consensus       138 Rps~~~~l~~  147 (153)
                      |.++++.++-
T Consensus       282 RlSAedyL~~  291 (1431)
T KOG1240|consen  282 RLSAEDYLQK  291 (1431)
T ss_pred             ccCHHHHHHh
Confidence            9999987753

>KOG1033|consensus

Probab=99.40  E-value=3.8e-13  Score=95.00  Aligned_cols=119  Identities=17%  Similarity=0.164  Sum_probs=80.4

Q ss_pred             CCCCCCCeeeeeeeeccccchhhccccccccccc-------------CCcccCCcccCccccccCCCCCCcchhhHHHHH
Q psy12581         15 KKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ-------------RGRCYYPAWMSPEALQKKPGDRNLEACDMWSFA   81 (153)
Q Consensus        15 ~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~-------------~~~~~~~~~~~pe~~~~~~~~~~~~~~dv~s~g   81 (153)
                      ++..|+++.+.||+...+..+|+.  |||+....             +...||..||+||.+.+.   .++.++|+|++|
T Consensus       375 k~~ihrdlkp~nif~~~d~q~kIg--DFgl~ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~---~y~~kvdIyaLG  449 (516)
T KOG1033|consen  375 KGLIHRDLKPSNIFFSDDDQLKIG--DFGLVTSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQ---QYSEKVDIYALG  449 (516)
T ss_pred             ccchhhhccccccccccchhhhhh--hhhheeecccCCcccchhhhhhhcccccccCCHHHHhhh---hhhhhcchhhHH
Confidence            566677777777777887777777  99987332             234789999999999975   455899999999


Q ss_pred             HHHHHHHh-CCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHH
Q psy12581         82 VLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFD  142 (153)
Q Consensus        82 ~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~  142 (153)
                      .+++|++. -...+..   ... ...++.+..++....-.+.-..|+.+++...|..||++.
T Consensus       450 lil~EL~~~f~T~~er---~~t-~~d~r~g~ip~~~~~d~p~e~~ll~~lls~~p~~RP~~~  507 (516)
T KOG1033|consen  450 LILAELLIQFSTQFER---IAT-LTDIRDGIIPPEFLQDYPEEYTLLQQLLSPSPEERPSAI  507 (516)
T ss_pred             HHHHHHHHHhccHHHH---HHh-hhhhhcCCCChHHhhcCcHHHHHHHHhcCCCcccCchHH
Confidence            99999986 3332211   111 112223333211112234567899999999999999443

>KOG1290|consensus

Probab=99.37  E-value=9.4e-13  Score=92.45  Aligned_cols=108  Identities=24%  Similarity=0.324  Sum_probs=72.5

Q ss_pred             hhccccccccccc----CCcccCCcccCccccccCCCCCCcchhhHHHHHHHHHHHHhCCCCCCC-------CCchhhhH
Q psy12581         36 RINMADAQFSFQQ----RGRCYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFAD-------LTPMEVGM  104 (153)
Q Consensus        36 kl~~~d~g~~~~~----~~~~~~~~~~~pe~~~~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~-------~~~~~~~~  104 (153)
                      ++++.|||-++..    +.-.-|..|.+||++.+..   ++..+|+||++|+++|++||..-|..       .+...+..
T Consensus       392 ~vKIaDlGNACW~~khFT~DIQTRQYRapEVllGsg---Y~~~ADiWS~AC~~FELaTGDyLFePhsG~~Y~rDEDHiA~  468 (590)
T KOG1290|consen  392 RVKIADLGNACWVHKHFTEDIQTRQYRAPEVLLGSG---YSTSADIWSTACMAFELATGDYLFEPHSGENYSRDEDHIAL  468 (590)
T ss_pred             eEEEeeccchhhhhhhhchhhhhhhccCcceeecCC---CCCchhHHHHHHHHHHhhcCceeecCCCCCCCCccHHHHHH
Confidence            3444499998654    3446688999999999864   44889999999999999999877632       11111111


Q ss_pred             H----------HHhhccc----------------c-------------CCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHH
Q psy12581        105 K----------VALEGLR----------------I-------------TIPPGISSHLSKLIRICMNEDPGKRPTFDMVL  145 (153)
Q Consensus       105 ~----------~~~~~~~----------------~-------------~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l  145 (153)
                      -          +...+..                +             ..+.....++.+|+.-||+++|++|||+.+++
T Consensus       469 i~ELLG~iPr~ia~~Gk~SRdFFnr~G~LrhI~~LK~WpL~~VL~eKY~~s~e~A~~fsdFL~PmLef~PeKR~tA~~cl  548 (590)
T KOG1290|consen  469 IMELLGKIPRKIALGGKYSRDFFNRRGELRHIRRLKPWPLYEVLIEKYEWSEEDAQQFSDFLSPMLEFDPEKRPTAAQCL  548 (590)
T ss_pred             HHHHHhhccHHHHhcCcchHhhhccccceecccccCCCcHHHHHHHHhCCCHHHHHHHHHHHHHHHhcCccccccHHHHh
Confidence            0          0000000                0             01112235688999999999999999999887


Q ss_pred             H
Q psy12581        146 P  146 (153)
Q Consensus       146 ~  146 (153)
                      +
T Consensus       549 ~  549 (590)
T KOG1290|consen  549 K  549 (590)
T ss_pred             c
Confidence            4

>KOG1164|consensus

Probab=99.35  E-value=1.2e-11  Score=85.51  Aligned_cols=143  Identities=12%  Similarity=0.039  Sum_probs=101.7

Q ss_pred             hhHHhhhhcCCCCCCCeeeeeeeecccc-c--hhhccccccccc--cc---------------CCcccCCcccCcccccc
Q psy12581          6 IVYSFYLNSKKSKTSNAFLFCCQIDEDL-T--ARINMADAQFSF--QQ---------------RGRCYYPAWMSPEALQK   65 (153)
Q Consensus         6 ~~~~~~lh~~~i~~~ni~~~~~~~~~~~-~--~kl~~~d~g~~~--~~---------------~~~~~~~~~~~pe~~~~   65 (153)
                      .-++++||+.|+.|+||++.|+.+.... .  -.+.+.|||++.  ..               ....||..|.++..-.+
T Consensus       132 l~~l~~lH~~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGlar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~  211 (322)
T KOG1164|consen  132 LNALEDLHSKGFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLG  211 (322)
T ss_pred             HHHHHHHHhcCcccCCcCHHHeeecCCCCcccceEEEEecCCCccccccCCCCcccccCCCCccCCCCccccccHHHhCC
Confidence            3467899999999999999999998664 2  234455999996  21               01237888888876555


Q ss_pred             CCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhcc--ccC-CCCCCCHHHHHHHHHHhcCCCCCCCCHH
Q psy12581         66 KPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGL--RIT-IPPGISSHLSKLIRICMNEDPGKRPTFD  142 (153)
Q Consensus        66 ~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~l~~~cl~~~p~~Rps~~  142 (153)
                      .   ..+++.|+||++.++.++..|..||.+........+......  ... .....+..+.++...+-..+...+|...
T Consensus       212 ~---e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pdy~  288 (322)
T KOG1164|consen  212 I---EQGRRDDLESLFYMLLELLKGSLPWEALEMTDLKSKFEKDPRKLLTDRFGDLKPEEFAKILEYIDSLDYEDKPDYE  288 (322)
T ss_pred             C---ccCCchhhhhHHHHHHHHhcCCCCCccccccchHHHHHHHhhhhccccccCCChHHHHHHHHHhhccCCcCCCCHH
Confidence            4   344889999999999999999999977554322222211111  111 2344567788888888889999999999


Q ss_pred             HHHHHHhhh
Q psy12581        143 MVLPILDKM  151 (153)
Q Consensus       143 ~~l~~L~~~  151 (153)
                      .+...|+..
T Consensus       289 ~~~~~l~~~  297 (322)
T KOG1164|consen  289 KLAELLKDV  297 (322)
T ss_pred             HHHHHHHHH
Confidence            998887654

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=99.29  E-value=3.2e-11  Score=82.38  Aligned_cols=136  Identities=24%  Similarity=0.248  Sum_probs=97.1

Q ss_pred             HhhhhcCCCCCCCeeeeeeeecccc-chhhcccccccccc-------------cCCcccCCcccCccccccCCCCCCcch
Q psy12581          9 SFYLNSKKSKTSNAFLFCCQIDEDL-TARINMADAQFSFQ-------------QRGRCYYPAWMSPEALQKKPGDRNLEA   74 (153)
Q Consensus         9 ~~~lh~~~i~~~ni~~~~~~~~~~~-~~kl~~~d~g~~~~-------------~~~~~~~~~~~~pe~~~~~~~~~~~~~   74 (153)
                      ..|+|..++.|+++.+.|++++..+ .+++.  |||.+..             .....++..|++||.+........+..
T Consensus       114 l~~~H~~~~~hrd~kp~nil~~~~~~~~~l~--dfg~~~~~~~~~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~  191 (384)
T COG0515         114 LEYLHSKGIIHRDIKPENILLDRDGRVVKLI--DFGLAKLLPDPGSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSS  191 (384)
T ss_pred             HHHHHhCCeeccCCCHHHeeecCCCCeEEEe--ccCcceecCCCCccccccccccccccccccCCHHHhcCCCCCCCCch
Confidence            4599999999999999999999888 57777  9998731             234578889999999876310134478


Q ss_pred             hhHHHHHHHHHHHHhCCCCCCCCCc---hhhhHHHHhhcccc--CCCCCC------CHHHHHHHHHHhcCCCCCCCCHHH
Q psy12581         75 CDMWSFAVLLWELATREVPFADLTP---MEVGMKVALEGLRI--TIPPGI------SSHLSKLIRICMNEDPGKRPTFDM  143 (153)
Q Consensus        75 ~dv~s~g~~~~~~~~g~~p~~~~~~---~~~~~~~~~~~~~~--~~~~~~------~~~~~~l~~~cl~~~p~~Rps~~~  143 (153)
                      .|+|++|++++++++|..|+.....   ..............  ..+...      .....+++..++..+|..|.+...
T Consensus       192 ~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~  271 (384)
T COG0515         192 SDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTPSLASPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSS  271 (384)
T ss_pred             HhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhcCCcccccccCccccchhhHHHHHHHHHHHhcCchhcCCHHH
Confidence            9999999999999999999766553   22222222222111  111111      157889999999999999998776


Q ss_pred             HHH
Q psy12581        144 VLP  146 (153)
Q Consensus       144 ~l~  146 (153)
                      ...
T Consensus       272 ~~~  274 (384)
T COG0515         272 DLS  274 (384)
T ss_pred             Hhh
Confidence            543

>KOG1163|consensus

Probab=99.09  E-value=2.3e-10  Score=74.49  Aligned_cols=139  Identities=11%  Similarity=0.108  Sum_probs=98.7

Q ss_pred             HhhhhcCCCCCCCeeeeeeeeccccch-hhccccccccccc--------------CCcccCCcccCccccccCCCCCCcc
Q psy12581          9 SFYLNSKKSKTSNAFLFCCQIDEDLTA-RINMADAQFSFQQ--------------RGRCYYPAWMSPEALQKKPGDRNLE   73 (153)
Q Consensus         9 ~~~lh~~~i~~~ni~~~~~~~~~~~~~-kl~~~d~g~~~~~--------------~~~~~~~~~~~pe~~~~~~~~~~~~   73 (153)
                      .+|+|.++++|+||+++|.+..-+-++ ++-++|||++..-              ....||..|.+-....+.   .-+.
T Consensus       124 iEyvH~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~d~~t~~HIpyre~r~ltGTaRYASinAh~g~---eqSR  200 (341)
T KOG1163|consen  124 IEYVHLRNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYRDIRTRQHIPYREDRNLTGTARYASINAHLGI---EQSR  200 (341)
T ss_pred             HHHHHhhccccccCCccceeeccccccceEEEEeccchhhhccccccccCccccCCccceeeeehhhhhhhhh---hhhh
Confidence            589999999999999999988766554 5667799998321              233677777765443322   2236


Q ss_pred             hhhHHHHHHHHHHHHhCCCCCCCCCchhhhHH---HHhhccccC---CCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHH
Q psy12581         74 ACDMWSFAVLLWELATREVPFADLTPMEVGMK---VALEGLRIT---IPPGISSHLSKLIRICMNEDPGKRPTFDMVLPI  147 (153)
Q Consensus        74 ~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~---~~~~~~~~~---~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~  147 (153)
                      ..|+=|+|.++.++..|..||.+.......++   +.......+   ....++.++.-.+.-|-..-.+.-|+...+-+.
T Consensus       201 RDDmeSvgYvLmYfnrG~LPWQglka~tk~QKyEkI~EkK~s~~ie~LC~G~P~EF~myl~Y~R~L~F~E~Pdy~ylrql  280 (341)
T KOG1163|consen  201 RDDMESVGYVLMYFNRGSLPWQGLKAATKKQKYEKISEKKMSTPIEVLCKGFPAEFAMYLNYCRGLGFEEKPDYMYLRQL  280 (341)
T ss_pred             hhhhhhhcceeeeeecCCCcccccchhhHHHHHHHHHHhhcCCCHHHHhCCCcHHHHHHHHHHhhcCCCCCCcHHHHHHH
Confidence            78999999999999999999998766554432   333322221   235578888888999988888888987766655


Q ss_pred             Hhh
Q psy12581        148 LDK  150 (153)
Q Consensus       148 L~~  150 (153)
                      +.-
T Consensus       281 Fri  283 (341)
T KOG1163|consen  281 FRI  283 (341)
T ss_pred             HHH
Confidence            543

>KOG0590|consensus

Probab=99.00  E-value=7.5e-11  Score=87.19  Aligned_cols=134  Identities=19%  Similarity=0.229  Sum_probs=98.3

Q ss_pred             HHhhhh-cCCCCCCCeeeeeeeecccc-chhhccccccccccc----------CCccc-CCcccCccccccCCCCCCcch
Q psy12581          8 YSFYLN-SKKSKTSNAFLFCCQIDEDL-TARINMADAQFSFQQ----------RGRCY-YPAWMSPEALQKKPGDRNLEA   74 (153)
Q Consensus         8 ~~~~lh-~~~i~~~ni~~~~~~~~~~~-~~kl~~~d~g~~~~~----------~~~~~-~~~~~~pe~~~~~~~~~~~~~   74 (153)
                      ++.|+| +.++.|+++.++|.+++..+ ..+..  |||++...          ...+| ++.|.+||...+..+  ..+.
T Consensus       135 ~l~~~H~~~~~~h~~ikP~n~~l~~s~~~l~~~--df~~At~~~~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~--~~~~  210 (601)
T KOG0590|consen  135 GLSYLHPENGVTHRDIKPSNSLLDESGSALKIA--DFGLATAYRNKNGAERSLKDRCGSSPPYGAPEHLSGKAY--RGPS  210 (601)
T ss_pred             CccccCcccccccCCCCCccchhccCCCcccCC--CchhhccccccCCcceeeecccCCCCCCCCcccccchhh--cCCC
Confidence            357888 88899999999988889998 67777  99998322          22377 999999999876322  2367


Q ss_pred             hhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhc-c--ccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHH
Q psy12581         75 CDMWSFAVLLWELATREVPFADLTPMEVGMKVALEG-L--RITIPPGISSHLSKLIRICMNEDPGKRPTFDMVL  145 (153)
Q Consensus        75 ~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l  145 (153)
                      .|+||.|+++..+.+|..|+............+... .  ........+....+++.+++..+|+.|.+.+++.
T Consensus       211 ~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~  284 (601)
T KOG0590|consen  211 VDVWSLGIVLSAMLTGELPWDFPSRKDGRYSSWKSNKGRFTQLPWNSISDQAHDLLHKILKENPSNRLSIEELK  284 (601)
T ss_pred             cccccccccccccccCCCCccccccccccceeecccccccccCccccCChhhhhcccccccCCchhcccccccc
Confidence            899999999999999999987654433222111111 1  1223445778899999999999999999987764

>KOG1165|consensus

Probab=98.94  E-value=6.9e-09  Score=70.58  Aligned_cols=140  Identities=13%  Similarity=0.113  Sum_probs=96.1

Q ss_pred             HhhhhcCCCCCCCeeeeeeeeccccch---hhccccccccccc--------------CCcccCCcccCccccccCCCCCC
Q psy12581          9 SFYLNSKKSKTSNAFLFCCQIDEDLTA---RINMADAQFSFQQ--------------RGRCYYPAWMSPEALQKKPGDRN   71 (153)
Q Consensus         9 ~~~lh~~~i~~~ni~~~~~~~~~~~~~---kl~~~d~g~~~~~--------------~~~~~~~~~~~pe~~~~~~~~~~   71 (153)
                      .+|+|+++++-+||+++|.+|..-+..   .|.+.|||++..-              .+..||..||+-..-.+.   .-
T Consensus       137 ie~vH~k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrDp~TkqHIPYrE~KSLsGTARYMSINTHlGr---EQ  213 (449)
T KOG1165|consen  137 IEYVHEKDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRDPKTKQHIPYREHKSLSGTARYMSINTHLGR---EQ  213 (449)
T ss_pred             HHHHHhcceeecccCccceeecCCCCCCCceEEEEeccchhhhcCccccccCccccccccccceeeeEeeccccc---hh
Confidence            579999999999999999999754433   2345599999321              334788999987665543   33


Q ss_pred             cchhhHHHHHHHHHHHHhCCCCCCCCCchhhh---HHHHhhccccC---CCCCCCHHHHHHHHHHhcCCCCCCCCHHHHH
Q psy12581         72 LEACDMWSFAVLLWELATREVPFADLTPMEVG---MKVALEGLRIT---IPPGISSHLSKLIRICMNEDPGKRPTFDMVL  145 (153)
Q Consensus        72 ~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~---~~~~~~~~~~~---~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l  145 (153)
                      ++..|+=++|=++.+++.|..||.+......-   .++-......+   ....++.++...+.-.-..+...-|+.+-+.
T Consensus       214 SRRDDLEaLGHvFmYFLRGsLPWQGLKA~tnK~kYeKIGe~Kr~T~i~~Lc~g~P~efa~Yl~yvR~L~F~E~PDYdylr  293 (449)
T KOG1165|consen  214 SRRDDLEALGHVFMYFLRGSLPWQGLKADTNKEKYEKIGETKRSTPIEVLCEGFPEEFATYLRYVRRLDFFETPDYDYLR  293 (449)
T ss_pred             hhhhhHHHhhhhhhhhccCCCccccccCcchHHHHHHhccccccCCHHHHHhcCHHHHHHHHHHHHhcCcccCCCHHHHH
Confidence            47889999999999999999999986644332   22222111111   1244667777777766667777788887776


Q ss_pred             HHHhhh
Q psy12581        146 PILDKM  151 (153)
Q Consensus       146 ~~L~~~  151 (153)
                      ..+..+
T Consensus       294 ~Lf~dv  299 (449)
T KOG1165|consen  294 KLFDDV  299 (449)
T ss_pred             HHHHHH
Confidence            666544

>KOG0606|consensus

Probab=98.78  E-value=1.3e-08  Score=78.02  Aligned_cols=134  Identities=22%  Similarity=0.201  Sum_probs=104.0

Q ss_pred             chhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccc-------------------------------------
Q psy12581          4 KKIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSF-------------------------------------   46 (153)
Q Consensus         4 ~~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~-------------------------------------   46 (153)
                      +..-..++||.+.++|++..+.+.++..+|..++.  +|+...                                     
T Consensus       912 ~~vqs~e~L~s~~r~h~~~~p~~~l~~~~gh~~l~--~~~t~~~vg~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~  989 (1205)
T KOG0606|consen  912 ERVQSLESLHSSLRKHRDLKPDSLLIAYDGHRPLT--DFGTLSKVGLIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEA  989 (1205)
T ss_pred             HHHhhhhccccchhhcccccccchhhcccCCcccC--ccccccccccccCcCCcccccccCccccccccccccccccchh
Confidence            34456788998888999999999898888888877  665210                                     


Q ss_pred             -ccCCcccCCcccCccccccCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccc-cCCCCCCCHHHH
Q psy12581         47 -QQRGRCYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLR-ITIPPGISSHLS  124 (153)
Q Consensus        47 -~~~~~~~~~~~~~pe~~~~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~  124 (153)
                       ......+|+.|.+||...+..+.   ..+|.|++|+++++.++|.+||....+......+...... +..+...+..++
T Consensus       990 ~~~~~~~~t~~~laPe~~lg~~hg---s~ad~~~~g~~l~e~l~g~pp~na~tpq~~f~ni~~~~~~~p~g~~~~s~~aq 1066 (1205)
T KOG0606|consen  990 RRKHAVVGTPDYLAPEILLGRRHG---SAADWWSSGVCLFEVLTGIPPFNAETPQQIFENILNRDIPWPEGPEEGSYEAQ 1066 (1205)
T ss_pred             hccccccCCCcccCCcccccccCC---CcchhhhhhhhhhhhhcCCCCCCCcchhhhhhccccCCCCCCCCccccChhhh
Confidence             00123678899999998876444   6789999999999999999999998888877666544333 334566888999


Q ss_pred             HHHHHHhcCCCCCCCCHH
Q psy12581        125 KLIRICMNEDPGKRPTFD  142 (153)
Q Consensus       125 ~l~~~cl~~~p~~Rps~~  142 (153)
                      +++...+..++.+|..+.
T Consensus      1067 ~~~~~ll~~~~~qr~~a~ 1084 (1205)
T KOG0606|consen 1067 DLINRLLTEEPTQRLGAK 1084 (1205)
T ss_pred             hhhhhhhccCchhccCcc
Confidence            999999999999997654

>PRK12274 serine/threonine protein kinase; Provisional

Probab=98.66  E-value=3.8e-08  Score=63.65  Aligned_cols=86  Identities=16%  Similarity=0.096  Sum_probs=60.1

Q ss_pred             HHhhhhcCCCCCCCe-eeeeeeeccccchhhcccccccccccCCc--------------------ccCCcccCccccccC
Q psy12581          8 YSFYLNSKKSKTSNA-FLFCCQIDEDLTARINMADAQFSFQQRGR--------------------CYYPAWMSPEALQKK   66 (153)
Q Consensus         8 ~~~~lh~~~i~~~ni-~~~~~~~~~~~~~kl~~~d~g~~~~~~~~--------------------~~~~~~~~pe~~~~~   66 (153)
                      ++.++|.+|+.|+|| .+.||+++.++.++|.  |||++......                    .+++.+++|+.-.-.
T Consensus       103 ~L~~lH~~GIvHrDL~kp~NILv~~~g~i~LI--DFG~A~~~~~~~~~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l  180 (218)
T PRK12274        103 LLQQLHRCGVAHNDLAKEANWLVQEDGSPAVI--DFQLAVRGNPRARWMRLLAREDLRHLLKHKRMYCPAALTPVERRVL  180 (218)
T ss_pred             HHHHHHHCcCccCCCCCcceEEEcCCCCEEEE--ECCCceecCCcchHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhh
Confidence            678899999999999 6899999998888877  99998532211                    234556666542211


Q ss_pred             CCCCCc-chhhHHHHHHHHHHHHhCCCCCCCC
Q psy12581         67 PGDRNL-EACDMWSFAVLLWELATREVPFADL   97 (153)
Q Consensus        67 ~~~~~~-~~~dv~s~g~~~~~~~~g~~p~~~~   97 (153)
                      .  ..+ ...+.++-|.-+|.++|+..+..+.
T Consensus       181 ~--~~~~~~~~w~~~g~~~~~~~~~~~~~~~~  210 (218)
T PRK12274        181 K--RTSWIRELWFATGKPVYRFVTRRVLHWED  210 (218)
T ss_pred             c--cchhHHHHHHHhcchHHHHHhccCCcccc
Confidence            0  111 4456777899999999987776443

>PRK09188 serine/threonine protein kinase; Provisional

Probab=98.66  E-value=5.9e-09  Score=72.94  Aligned_cols=57  Identities=16%  Similarity=-0.045  Sum_probs=45.7

Q ss_pred             hHHhhhhcCCCCCCCe-eeeeeeeccccchhhccccccccccc---------------CCcccCCcccCcccccc
Q psy12581          7 VYSFYLNSKKSKTSNA-FLFCCQIDEDLTARINMADAQFSFQQ---------------RGRCYYPAWMSPEALQK   65 (153)
Q Consensus         7 ~~~~~lh~~~i~~~ni-~~~~~~~~~~~~~kl~~~d~g~~~~~---------------~~~~~~~~~~~pe~~~~   65 (153)
                      -++.|||+++|.|+|| ++.||+++.++.+++.  |||++...               .+..++..|++||.+..
T Consensus       122 ~aL~~lH~~gIiHrDL~KP~NILv~~~~~ikLi--DFGlA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~  194 (365)
T PRK09188        122 RALRDLHRAGITHNDLAKPQNWLMGPDGEAAVI--DFQLASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTP  194 (365)
T ss_pred             HHHHHHHHCCCeeCCCCCcceEEEcCCCCEEEE--ECccceecccCcchhhhhhhhhhhhhhccCccCCcccCCh
Confidence            4678999999999999 8999999988888877  99998422               22356667899998754

>KOG1266|consensus

Probab=98.64  E-value=5.7e-08  Score=66.23  Aligned_cols=131  Identities=18%  Similarity=0.206  Sum_probs=81.3

Q ss_pred             HHhhhhcCC--CCCCCeeeeeeeeccccchhhcccccccc---------cccCCcccCCcccCccccccCCCCCCcchhh
Q psy12581          8 YSFYLNSKK--SKTSNAFLFCCQIDEDLTARINMADAQFS---------FQQRGRCYYPAWMSPEALQKKPGDRNLEACD   76 (153)
Q Consensus         8 ~~~~lh~~~--i~~~ni~~~~~~~~~~~~~kl~~~d~g~~---------~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~d   76 (153)
                      ++.|||+.+  ++|+|+..+.+++..+|-+|+.+.-+...         .......+.++|-+|+.-...   ..+-.+|
T Consensus       188 al~yLhs~~PpiihgnlTc~tifiq~ngLIkig~~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~t---n~~~a~d  264 (458)
T KOG1266|consen  188 ALSYLHSCDPPIIHGNLTCDTIFIQHNGLIKIGSVAPDSTHPSVNSTREAEKSVNTSLPGFSAPESGTTT---NTTGASD  264 (458)
T ss_pred             hhhhhhccCCccccCCcchhheeecCCceEEecccCccccchhhhhhhHhhhhccccCCccccCCcCccc---ccccchh
Confidence            578999866  79999999999999999888853333221         111223456677777653322   2335789


Q ss_pred             HHHHHHHHHHHHhCCC-CCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581         77 MWSFAVLLWELATREV-PFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus        77 v~s~g~~~~~~~~g~~-p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      +|+||++..++..+.. |-.+.........+..-....     ....-++++.+|++..|..||++.+++-
T Consensus       265 Iy~fgmcAlemailEiq~tnseS~~~~ee~ia~~i~~l-----en~lqr~~i~kcl~~eP~~rp~ar~llf  330 (458)
T KOG1266|consen  265 IYKFGMCALEMAILEIQSTNSESKVEVEENIANVIIGL-----ENGLQRGSITKCLEGEPNGRPDARLLLF  330 (458)
T ss_pred             hhhhhHHHHHHHHheeccCCCcceeehhhhhhhheeec-----cCccccCcCcccccCCCCCCcchhhhhc
Confidence            9999999999876643 222221111111111000011     1223456888999999999999998763

>KOG2137|consensus

Probab=98.60  E-value=1.7e-08  Score=74.19  Aligned_cols=132  Identities=18%  Similarity=0.204  Sum_probs=91.0

Q ss_pred             Hhhhhc-CCCCCCCeeeeeeeeccccchhhcccccccccccCCc----------------ccCCcccCccccccCCCCCC
Q psy12581          9 SFYLNS-KKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQRGR----------------CYYPAWMSPEALQKKPGDRN   71 (153)
Q Consensus         9 ~~~lh~-~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~~~----------------~~~~~~~~pe~~~~~~~~~~   71 (153)
                      +.|+|. .+++|+||.+..|++++++..|+.  .|+++......                .-...|.+||.+...   ..
T Consensus       112 l~flh~sAk~VH~ni~p~~i~~na~~~wkl~--Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~~~---~~  186 (700)
T KOG2137|consen  112 LAFLHRSAKVVHGNIQPEAIVVNANGDWKLA--GFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLLGT---TN  186 (700)
T ss_pred             hhhhccCcceeecccchhheeeccCcceeec--cchhhhccCCCCccccccCCCCCChhhccCcccccchhhccc---cc
Confidence            467884 579999999999999999999998  66665332220                223468999988763   34


Q ss_pred             cchhhHHHHHHHHHHHH-hCCCCCCCCCchhhhHHHHh--hccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHH
Q psy12581         72 LEACDMWSFAVLLWELA-TREVPFADLTPMEVGMKVAL--EGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVL  145 (153)
Q Consensus        72 ~~~~dv~s~g~~~~~~~-~g~~p~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l  145 (153)
                      +.++|++|+|+.+|.+. .|+.-+..............  +-...-.....+.++.+-+.+++..++..||++..+.
T Consensus       187 ~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~~~~~~~~~~~~~~~~s~~~p~el~~~l~k~l~~~~~~rp~~~~l~  263 (700)
T KOG2137|consen  187 TPASDVFSLGVLIYTIYNGGKSIIAANGGLLSYSFSRNLLNAGAFGYSNNLPSELRESLKKLLNGDSAVRPTLDLLL  263 (700)
T ss_pred             cccccceeeeeEEEEEecCCcchhhccCCcchhhhhhcccccccccccccCcHHHHHHHHHHhcCCcccCcchhhhh
Confidence            57899999999999987 45555443322222111110  1112223466888999999999999999999766554

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=98.56  E-value=8.5e-09  Score=77.78  Aligned_cols=74  Identities=11%  Similarity=-0.033  Sum_probs=56.1

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc-------CCcccCCcccCccccccCCCCCCcchhhH
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ-------RGRCYYPAWMSPEALQKKPGDRNLEACDM   77 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~-------~~~~~~~~~~~pe~~~~~~~~~~~~~~dv   77 (153)
                      ...++.|||.++|+|+||++.||+++.++.++|.  |||++...       ....+++.|++||.......  ....+++
T Consensus       113 il~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~--DFGls~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~--~~~~s~~  188 (669)
T cd05610         113 VALALDYLHRHGIIHRDLKPDNMLISNEGHIKLT--DFGLSKVTLNRELNMMDILTTPSMAKPKNDYSRTP--GQVLSLI  188 (669)
T ss_pred             HHHHHHHHHhCCEEeCCccHHHEEEcCCCCEEEE--eCCCCccccCCcccccccccCccccCccccccCCC--Cceeeee
Confidence            4557899999999999999999999999988888  99998432       23467888999986544322  1244567


Q ss_pred             HHHHH
Q psy12581         78 WSFAV   82 (153)
Q Consensus        78 ~s~g~   82 (153)
                      |++|.
T Consensus       189 ~s~g~  193 (669)
T cd05610         189 SSLGF  193 (669)
T ss_pred             eecCc
Confidence            77774

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>KOG1166|consensus

Probab=98.45  E-value=8.1e-07  Score=68.66  Aligned_cols=128  Identities=9%  Similarity=0.000  Sum_probs=82.5

Q ss_pred             HHhhhhcCCCCCCCeeeeeeeec-----cccchhhccccccccccc---------CCcccCCcccCccccccCCCCCCcc
Q psy12581          8 YSFYLNSKKSKTSNAFLFCCQID-----EDLTARINMADAQFSFQQ---------RGRCYYPAWMSPEALQKKPGDRNLE   73 (153)
Q Consensus         8 ~~~~lh~~~i~~~ni~~~~~~~~-----~~~~~kl~~~d~g~~~~~---------~~~~~~~~~~~pe~~~~~~~~~~~~   73 (153)
                      +.+.||..+|+|+||+++|+++.     +.+..-|.++|||.+..+         ...+.|-.+.++|+..++   .++-
T Consensus       806 ive~lH~~~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~siDm~lfp~~~~F~~~~~td~f~C~EM~~gr---pWtY  882 (974)
T KOG1166|consen  806 IVEHLHAMGIIHGDIKPDNFLLRREICADSDSKGLYLIDFGRSIDMKLFPDGTKFKAVWHTDLFDCIEMREGR---PWTY  882 (974)
T ss_pred             HHHHHHhcceecccCCcceeEeecccCCCCcccceEEEecccceeeeEcCCCcEEeeeeccccchhHHHhcCC---CCch
Confidence            46789999999999999998874     233334556699998544         233567788999998876   4457


Q ss_pred             hhhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCC----CCCCHH-HHHHHHHHhcCCCCCCCCHHHHHHHH
Q psy12581         74 ACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIP----PGISSH-LSKLIRICMNEDPGKRPTFDMVLPIL  148 (153)
Q Consensus        74 ~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~-~~~l~~~cl~~~p~~Rps~~~~l~~L  148 (153)
                      ..|.|.++.+++-|+-|+.--            ...+..+..+    .-+..+ ..++...+|..+-..=|...++...|
T Consensus       883 q~DyfGlAa~~h~mLFG~y~q------------~~~g~~~~~~~~~~Ry~~~~~W~~~F~~lLN~~~~~~p~l~~lr~~~  950 (974)
T KOG1166|consen  883 QIDYFGLAATVHVMLFGKYME------------VKNGSSWMVKTNFPRYWKRDMWNKFFDLLLNPDCDTLPNLQELRTEL  950 (974)
T ss_pred             hhhhHHHHHHHHHHHHHHHHH------------hcCCcceeccccchhhhhHHHHHHHHHHHhCcCcccchhHHHHHHHH
Confidence            899999999999998885521            1122222222    222223 34566667774433335566666555


Q ss_pred             hh
Q psy12581        149 DK  150 (153)
Q Consensus       149 ~~  150 (153)
                      +.
T Consensus       951 ~~  952 (974)
T KOG1166|consen  951 EE  952 (974)
T ss_pred             HH
Confidence            54

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=98.28  E-value=6.7e-08  Score=63.48  Aligned_cols=70  Identities=9%  Similarity=-0.128  Sum_probs=47.0

Q ss_pred             hHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccccCCcccCCcccCccccccCCCCCCcchhhHHHHHHHHHH
Q psy12581          7 VYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQRGRCYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWE   86 (153)
Q Consensus         7 ~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~dv~s~g~~~~~   86 (153)
                      -+...+|+.|+.|+|+.+.|++++.+| +++.  |||...........     ...+...   .+..++|+|++|+++..
T Consensus       146 ~~l~~lH~~gi~H~Dikp~Nili~~~g-i~li--Dfg~~~~~~e~~a~-----d~~vler---~y~~~~di~~lg~~~~~  214 (232)
T PRK10359        146 ASIESLHQHGMVSGDPHKGNFIVSKNG-LRII--DLSGKRCTAQRKAK-----DRIDLER---HYGIKNEIKDLGYYLLI  214 (232)
T ss_pred             HHHHHHHHcCCccCCCChHHEEEeCCC-EEEE--ECCCcccccchhhH-----HHHHHHh---HhcccccccceeEeehH
Confidence            457889999999999999999999988 5555  99876332111100     0111221   23357999999988764


Q ss_pred             H
Q psy12581         87 L   87 (153)
Q Consensus        87 ~   87 (153)
                      .
T Consensus       215 ~  215 (232)
T PRK10359        215 Y  215 (232)
T ss_pred             H
Confidence            4

>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]

Probab=98.18  E-value=1.4e-05  Score=56.80  Aligned_cols=146  Identities=17%  Similarity=0.228  Sum_probs=94.1

Q ss_pred             hHHhhhhcCCCCCCCeeeeeeeeccccchhhccc-cccccccc---CCcccCCcccCccccc--cCCCCCCcchhhHHHH
Q psy12581          7 VYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMA-DAQFSFQQ---RGRCYYPAWMSPEALQ--KKPGDRNLEACDMWSF   80 (153)
Q Consensus         7 ~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~-d~g~~~~~---~~~~~~~~~~~pe~~~--~~~~~~~~~~~dv~s~   80 (153)
                      .+-.-||..|-.-+|+..+|+++++++.+.+.-+ ||.+....   ....|...|++||.-.  ...+...+...|.|.+
T Consensus       128 ~aFA~lH~~Gh~vGDVn~~~~lVsd~~~V~LVdsDsfqi~~ng~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGL  207 (637)
T COG4248         128 SAFATLHEHGHVVGDVNQNSFLVSDDSKVVLVDSDSFQINANGTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGL  207 (637)
T ss_pred             HHHHHHHhcCCcccccCccceeeecCceEEEEcccceeeccCCceEecccCccccCCHHHhccccccccCCCccccchhH
Confidence            3445688888888999999999999988887622 34333111   2346778999999754  1112234467899999


Q ss_pred             HHHHHHHHh-CCCCCCCCC-------chh--hhH------HHHhhccccC---CC-CCCCHHHHHHHHHHhcCC--CCCC
Q psy12581         81 AVLLWELAT-REVPFADLT-------PME--VGM------KVALEGLRIT---IP-PGISSHLSKLIRICMNED--PGKR  138 (153)
Q Consensus        81 g~~~~~~~~-g~~p~~~~~-------~~~--~~~------~~~~~~~~~~---~~-~~~~~~~~~l~~~cl~~~--p~~R  138 (153)
                      |+++++++. |+.||.+..       +-+  +..      .....++.++   .| ...++.++.+..+|....  +.-|
T Consensus       208 avLiF~lL~ggrHPysGI~~~~~ap~p~E~~Ia~g~f~ya~~~~~g~~p~P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~R  287 (637)
T COG4248         208 AVLIFHLLFGGRHPYSGIPLISDAPNPLETDIAHGRFAYASDQRRGLKPPPRSIPLSMLPPDVQALFQQAFTESGVATPR  287 (637)
T ss_pred             HHHHHHHHhcCCCCCCcccccCCCCCcchhhhhcceeeechhccCCCCCCCCCCChhhcCHHHHHHHHHHhcccCCCCCC
Confidence            999999876 589987521       111  000      0001111111   11 125688999999998765  4589


Q ss_pred             CCHHHHHHHHhhhh
Q psy12581        139 PTFDMVLPILDKMK  152 (153)
Q Consensus       139 ps~~~~l~~L~~~~  152 (153)
                      ||++..+..|..+.
T Consensus       288 P~a~aW~aAl~al~  301 (637)
T COG4248         288 PTAKAWVAALDALR  301 (637)
T ss_pred             CCHHHHHHHHHHHH
Confidence            99999988887654

>KOG0601|consensus

Probab=98.17  E-value=2.3e-06  Score=62.10  Aligned_cols=131  Identities=15%  Similarity=0.054  Sum_probs=87.8

Q ss_pred             HHhhhhcCCCCCCCeeeeeeeeccc-cchhhcccccccccccC------------CcccCCcccCccccccCCCCCCcch
Q psy12581          8 YSFYLNSKKSKTSNAFLFCCQIDED-LTARINMADAQFSFQQR------------GRCYYPAWMSPEALQKKPGDRNLEA   74 (153)
Q Consensus         8 ~~~~lh~~~i~~~ni~~~~~~~~~~-~~~kl~~~d~g~~~~~~------------~~~~~~~~~~pe~~~~~~~~~~~~~   74 (153)
                      ++..+|..++.|.++.+.|++...+ ...++.  |||+.....            ...+...|++||...+    ..+..
T Consensus       234 al~~~hs~~~~~~~~kp~~i~~~~~~~s~~~~--df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~----l~~~~  307 (524)
T KOG0601|consen  234 ALSHLHSNNIVHDDLKPANIFTTSDWTSCKLT--DFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNG----LATFA  307 (524)
T ss_pred             cccccCCCcccccccchhheecccccceeecC--CcceeEEccCCccccceeeeecCCCCceEeChhhhcc----ccchH
Confidence            5678899999999999999999888 445555  888763221            1145678999999875    45578


Q ss_pred             hhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhc-cccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581         75 CDMWSFAVLLWELATREVPFADLTPMEVGMKVALEG-LRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus        75 ~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      .|++++|.+..+..++......... ..+.. ...+ ...++....+..+...+.+++..++..|++.+.+.+
T Consensus       308 ~di~sl~ev~l~~~l~~~~~~~g~~-~~W~~-~r~~~ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~  378 (524)
T KOG0601|consen  308 SDIFSLGEVILEAILGSHLPSVGKN-SSWSQ-LRQGYIPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTA  378 (524)
T ss_pred             hhhcchhhhhHhhHhhcccccCCCC-CCccc-cccccCchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhc
Confidence            9999999999988776543322100 00001 1111 223333445666777888999999999998876653

>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

Probab=97.96  E-value=2.4e-06  Score=54.82  Aligned_cols=40  Identities=10%  Similarity=-0.079  Sum_probs=33.2

Q ss_pred             hhHHhhhhc-CCCCCCCeeeeeeeeccccchhhccccccccccc
Q psy12581          6 IVYSFYLNS-KKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ   48 (153)
Q Consensus         6 ~~~~~~lh~-~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~   48 (153)
                      .-+..++|+ +++.|+||.+.||+++ ++.+++.  |||++...
T Consensus       127 ~~~l~~lH~~~givHrDlkP~NIll~-~~~~~li--DFG~a~~~  167 (190)
T cd05145         127 VEQMRRLYQEAGLVHGDLSEYNILYH-DGKPYII--DVSQAVEL  167 (190)
T ss_pred             HHHHHHHHHhCCEecCCCChhhEEEE-CCCEEEE--Ecccceec
Confidence            345689999 9999999999999998 6777777  99987543

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=97.89  E-value=3.6e-06  Score=54.09  Aligned_cols=38  Identities=11%  Similarity=-0.060  Sum_probs=30.1

Q ss_pred             hHHhhh-hcCCCCCCCeeeeeeeeccccchhhcccccccccc
Q psy12581          7 VYSFYL-NSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQ   47 (153)
Q Consensus         7 ~~~~~l-h~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~   47 (153)
                      -++.++ |+.++.|+||++.||+++. +.+++.  |||++..
T Consensus       128 ~~L~~l~H~~giiHrDlkP~NIli~~-~~v~Li--DFG~a~~  166 (190)
T cd05147         128 QIMRILYQDCRLVHADLSEYNLLYHD-GKLYII--DVSQSVE  166 (190)
T ss_pred             HHHHHHHHhCCcccCCCCHHHEEEEC-CcEEEE--Ecccccc
Confidence            456788 5789999999999999984 555555  9998753

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain

Probab=97.78  E-value=1.4e-05  Score=51.58  Aligned_cols=38  Identities=13%  Similarity=-0.059  Sum_probs=33.1

Q ss_pred             HHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccc
Q psy12581          8 YSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQ   47 (153)
Q Consensus         8 ~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~   47 (153)
                      ...++|++++.|+||.+.||+++.++.+++.  |||.+..
T Consensus       137 ~l~~lh~~gi~H~Dl~p~Nill~~~~~~~li--Dfg~~~~  174 (198)
T cd05144         137 EIVKAYKHGIIHGDLSEFNILVDDDEKIYII--DWPQMVS  174 (198)
T ss_pred             HHHHHHHCCCCcCCCCcccEEEcCCCcEEEE--ECCcccc
Confidence            4568899999999999999999998888888  9998744

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom

>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed

Probab=97.75  E-value=1.2e-05  Score=53.56  Aligned_cols=38  Identities=8%  Similarity=-0.131  Sum_probs=32.9

Q ss_pred             hHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccc
Q psy12581          7 VYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSF   46 (153)
Q Consensus         7 ~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~   46 (153)
                      -+..+||++||.|+|+.+.||+++.++.+++.  |||.+.
T Consensus       153 ~~l~~lH~~GI~HrDlkp~NILv~~~~~v~LI--Dfg~~~  190 (239)
T PRK01723        153 QLIARFHDAGVYHADLNAHNILLDPDGKFWLI--DFDRGE  190 (239)
T ss_pred             HHHHHHHHCCCCCCCCCchhEEEcCCCCEEEE--ECCCcc
Confidence            45789999999999999999999988867776  999764

>KOG1243|consensus

Probab=97.74  E-value=0.00044  Score=51.67  Aligned_cols=77  Identities=16%  Similarity=0.163  Sum_probs=54.7

Q ss_pred             hHHhhhh-cCCCCCCCeeeeeeeeccccchhhcccccccccccCCccc-------CCcccCccccccCCCCCCcchhhHH
Q psy12581          7 VYSFYLN-SKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQRGRCY-------YPAWMSPEALQKKPGDRNLEACDMW   78 (153)
Q Consensus         7 ~~~~~lh-~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~~~~~-------~~~~~~pe~~~~~~~~~~~~~~dv~   78 (153)
                      -++.||| ..++.|+||....++|+..|..|+.  +|.+.........       -..|..|+.+...     ....|.|
T Consensus       115 ~AL~FL~~d~~lvHgNv~~~SVfVn~~GeWkLg--gle~v~~~~~~~~~~~~~~~~~s~~~P~~~~~s-----~~s~D~~  187 (690)
T KOG1243|consen  115 AALSFLNDDCNLVHGNVCKDSVFVNESGEWKLG--GLELVSKASGFNAPAKSLYLIESFDDPEEIDPS-----EWSIDSW  187 (690)
T ss_pred             HHHHHHhccCCeeeccEeeeeEEEcCCCcEEEe--eeEEEeccccCCcccccchhhhcccChhhcCcc-----ccchhhh
Confidence            4678997 5789999999999999999999998  7766533322211       1124444433321     0246999


Q ss_pred             HHHHHHHHHHhC
Q psy12581         79 SFAVLLWELATR   90 (153)
Q Consensus        79 s~g~~~~~~~~g   90 (153)
                      .||++.++++.|
T Consensus       188 ~Lg~li~el~ng  199 (690)
T KOG1243|consen  188 GLGCLIEELFNG  199 (690)
T ss_pred             hHHHHHHHHhCc
Confidence            999999999998

>KOG0601|consensus

Probab=97.57  E-value=3.5e-05  Score=56.16  Aligned_cols=134  Identities=14%  Similarity=0.051  Sum_probs=84.5

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccc-cchhhccccccccccc----CCcccCCccc--CccccccCCCCCCcchhhH
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDED-LTARINMADAQFSFQQ----RGRCYYPAWM--SPEALQKKPGDRNLEACDM   77 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~-~~~kl~~~d~g~~~~~----~~~~~~~~~~--~pe~~~~~~~~~~~~~~dv   77 (153)
                      .+.++.++|+.+++|.++.+.||++..+ +..++.  |||.....    ......-.+.  ++......   ....+.|+
T Consensus       375 ~~~~l~~i~s~~~~~~d~~psni~i~~~~~~~~~~--~~~~~t~~~~~~~~~~~~~r~~p~~~~~~e~~---~~~~~~~~  449 (524)
T KOG0601|consen  375 ILTALNVIHSKLFVHLDVKPSNILISNDGFFSKLG--DFGCWTRLAFSSGVFHHIDRLYPIAEILLEDY---PHLSKADI  449 (524)
T ss_pred             HHhccccccchhhhcccccccceeeccchhhhhcc--ccccccccceecccccccccccccchhhcccc---cccccccc
Confidence            4567888999999999999999998876 555666  88876321    1122222333  33333332   34478999


Q ss_pred             HHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHH
Q psy12581         78 WSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPIL  148 (153)
Q Consensus        78 ~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L  148 (153)
                      +++|..+.+..++..--.....    ...+..+..+..+. ....+..+.+.+...++..||.+.++....
T Consensus       450 ~sl~~~~~e~~~~~~ls~~~~~----~~~i~~~~~p~~~~-~~~~~q~~~kv~~~~~~~~~~l~~~l~~~~  515 (524)
T KOG0601|consen  450 FSLGLSVDEAITGSPLSESGVQ----SLTIRSGDTPNLPG-LKLQLQVLLKVMINPDRKRRPSAVELSLHS  515 (524)
T ss_pred             ccccccccccccCcccCccccc----ceeeecccccCCCc-hHHhhhhhhhhhcCCccccchhhhhhcccc
Confidence            9999999998887542211111    11122222232333 337788889999999999999888765443

>smart00090 RIO RIO-like kinase

Probab=97.49  E-value=2.9e-05  Score=51.66  Aligned_cols=38  Identities=13%  Similarity=-0.045  Sum_probs=32.0

Q ss_pred             hhHHhhhhcCC-CCCCCeeeeeeeeccccchhhccccccccc
Q psy12581          6 IVYSFYLNSKK-SKTSNAFLFCCQIDEDLTARINMADAQFSF   46 (153)
Q Consensus         6 ~~~~~~lh~~~-i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~   46 (153)
                      .-+..+||+++ +.|+||.+.||+++ ++.+++.  |||.+.
T Consensus       158 ~~~l~~LH~~g~iiH~Dikp~NIli~-~~~i~Li--DFg~a~  196 (237)
T smart00090      158 LEEMRKLYKEGELVHGDLSEYNILVH-DGKVVII--DVSQSV  196 (237)
T ss_pred             HHHHHHHHhcCCEEeCCCChhhEEEE-CCCEEEE--EChhhh
Confidence            45678999999 99999999999999 6666666  999764

>cd05119 RIO RIO kinase family, catalytic domain

Probab=97.30  E-value=9.7e-05  Score=47.07  Aligned_cols=38  Identities=13%  Similarity=-0.022  Sum_probs=32.2

Q ss_pred             hHHhhhhc-CCCCCCCeeeeeeeeccccchhhcccccccccc
Q psy12581          7 VYSFYLNS-KKSKTSNAFLFCCQIDEDLTARINMADAQFSFQ   47 (153)
Q Consensus         7 ~~~~~lh~-~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~   47 (153)
                      -+..++|+ +++.|+|+.+.||+++ ++.+++.  |||.+..
T Consensus       125 ~~l~~lh~~~~ivH~Dl~p~Nili~-~~~~~li--Dfg~a~~  163 (187)
T cd05119         125 ELMRKLYREAGLVHGDLSEYNILVD-DGKVYII--DVPQAVE  163 (187)
T ss_pred             HHHHHHhhccCcCcCCCChhhEEEE-CCcEEEE--ECccccc
Confidence            45678998 9999999999999999 7777777  9998743

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct

>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]

Probab=97.26  E-value=0.00011  Score=46.67  Aligned_cols=34  Identities=9%  Similarity=-0.127  Sum_probs=28.7

Q ss_pred             hhhhcCCCCCCCeeeeeeeeccccchhhccccccccc
Q psy12581         10 FYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSF   46 (153)
Q Consensus        10 ~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~   46 (153)
                      .=||..||.|+|+..+|++++.++   +.+.|||++.
T Consensus       106 g~lH~~givHGDLTtsNiIl~~~~---i~~IDfGLg~  139 (204)
T COG3642         106 GKLHKAGIVHGDLTTSNIILSGGR---IYFIDFGLGE  139 (204)
T ss_pred             HHHHhcCeecCCCccceEEEeCCc---EEEEECCccc
Confidence            348999999999999999998876   5566999874

>PRK14879 serine/threonine protein kinase; Provisional

Probab=97.18  E-value=0.00018  Score=46.71  Aligned_cols=37  Identities=8%  Similarity=-0.186  Sum_probs=30.8

Q ss_pred             hHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccc
Q psy12581          7 VYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSF   46 (153)
Q Consensus         7 ~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~   46 (153)
                      -++.++|+.++.|+|+.+.||+++ ++.+++.  |||.+.
T Consensus       106 ~~l~~lH~~~i~H~Dl~p~Nil~~-~~~~~li--Df~~a~  142 (211)
T PRK14879        106 RLVGKLHSAGIIHGDLTTSNMILS-GGKIYLI--DFGLAE  142 (211)
T ss_pred             HHHHHHHhCCcccCCCCcccEEEE-CCCEEEE--ECCccc
Confidence            356889999999999999999999 6666666  998753

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=97.09  E-value=0.00023  Score=45.85  Aligned_cols=38  Identities=8%  Similarity=-0.202  Sum_probs=31.5

Q ss_pred             hhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccc
Q psy12581          6 IVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSF   46 (153)
Q Consensus         6 ~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~   46 (153)
                      .-.+.+||+.++.|+|+.+.|++++ ++.+++.  |||.+.
T Consensus       100 ~~~l~~lH~~gi~H~Dl~~~Nil~~-~~~~~li--Dfg~a~  137 (199)
T TIGR03724       100 GRLVGKLHKAGIVHGDLTTSNIIVR-DDKLYLI--DFGLGK  137 (199)
T ss_pred             HHHHHHHHHCCeecCCCCcceEEEE-CCcEEEE--ECCCCc
Confidence            3456889999999999999999998 6666666  999763

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=96.97  E-value=0.00027  Score=52.55  Aligned_cols=38  Identities=8%  Similarity=-0.176  Sum_probs=31.5

Q ss_pred             hhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccc
Q psy12581          6 IVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSF   46 (153)
Q Consensus         6 ~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~   46 (153)
                      .-.+.+||++++.|+|+++.||++ .++.+++.  |||++.
T Consensus       438 ~~~L~~lH~~giiHrDlkp~NILl-~~~~~~li--DFGla~  475 (535)
T PRK09605        438 GEIVAKLHKAGIVHGDLTTSNFIV-RDDRLYLI--DFGLGK  475 (535)
T ss_pred             HHHHHHHHhCCCccCCCChHHEEE-ECCcEEEE--eCcccc
Confidence            346789999999999999999999 56666666  999764

>PRK10345 hypothetical protein; Provisional

Probab=96.95  E-value=0.00019  Score=46.87  Aligned_cols=32  Identities=13%  Similarity=-0.101  Sum_probs=25.8

Q ss_pred             hhhhcCCCCCCCeeeeeeeecccc----chhhcccccc
Q psy12581         10 FYLNSKKSKTSNAFLFCCQIDEDL----TARINMADAQ   43 (153)
Q Consensus        10 ~~lh~~~i~~~ni~~~~~~~~~~~----~~kl~~~d~g   43 (153)
                      +|||+.+|.|+||++.||+++..+    .++|.  |++
T Consensus       119 ~yLh~~~IvhrDlKp~NILl~~~~~~~~~~~Li--Dg~  154 (210)
T PRK10345        119 RYLLDNRIVTMELKPQNILCQRISESEVIPVVC--DNI  154 (210)
T ss_pred             HHHHHCCEeecCCCHHHEEEeccCCCCCcEEEE--ECC
Confidence            799999999999999999997532    45555  954

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=96.10  E-value=0.0029  Score=45.99  Aligned_cols=37  Identities=5%  Similarity=-0.311  Sum_probs=31.4

Q ss_pred             HhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccc
Q psy12581          9 SFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQ   47 (153)
Q Consensus         9 ~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~   47 (153)
                      ...+|+.|+.|+|+.+.||+++.++.+++.  |||++..
T Consensus       270 l~ql~~~g~~H~D~hPgNilv~~~g~i~li--DfG~~~~  306 (437)
T TIGR01982       270 LNQVLRDGFFHADLHPGNIFVLKDGKIIAL--DFGIVGR  306 (437)
T ss_pred             HHHHHhCCceeCCCCcccEEECCCCcEEEE--eCCCeeE
Confidence            456788999999999999999999877777  9998744

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>KOG3087|consensus

Probab=95.91  E-value=0.0034  Score=40.23  Aligned_cols=36  Identities=11%  Similarity=-0.075  Sum_probs=28.7

Q ss_pred             hhhcCCCCCCCeeeeeeeeccccchh-hccccccccc
Q psy12581         11 YLNSKKSKTSNAFLFCCQIDEDLTAR-INMADAQFSF   46 (153)
Q Consensus        11 ~lh~~~i~~~ni~~~~~~~~~~~~~k-l~~~d~g~~~   46 (153)
                      =||..|++|+|+..+|+++..++.-. +.+.|||++.
T Consensus       128 klH~ndiiHGDLTTSNill~~~~~~~~~~lIdfgls~  164 (229)
T KOG3087|consen  128 KLHDNDIIHGDLTTSNILLRSDGNQITPILIDFGLSS  164 (229)
T ss_pred             HhhhCCeecccccccceEEecCCCcCceEEEeecchh
Confidence            48999999999999999987665443 3566999873

>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional

Probab=95.84  E-value=0.0029  Score=42.95  Aligned_cols=38  Identities=3%  Similarity=0.089  Sum_probs=29.8

Q ss_pred             HHhhhhcCCCCCCCeeeeeeeecc-----ccchhhcccccccc
Q psy12581          8 YSFYLNSKKSKTSNAFLFCCQIDE-----DLTARINMADAQFS   45 (153)
Q Consensus         8 ~~~~lh~~~i~~~ni~~~~~~~~~-----~~~~kl~~~d~g~~   45 (153)
                      ...-||..|+.|+|+.+.||+++.     ++..++.+.||+.+
T Consensus       150 ~i~~LH~~Gi~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl~r~  192 (268)
T PRK15123        150 MVRDMHAAGINHRDCYICHFLLHLPFPGREEDLKLSVIDLHRA  192 (268)
T ss_pred             HHHHHHHCcCccCCCChhhEEEeccccCCCCCceEEEEECCcc
Confidence            345689999999999999999985     34456666699865

>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

Probab=95.80  E-value=0.0035  Score=37.93  Aligned_cols=36  Identities=11%  Similarity=-0.043  Sum_probs=28.7

Q ss_pred             HHhhhhc---CCCCCCCeeeeeeeeccccchhhcccccccc
Q psy12581          8 YSFYLNS---KKSKTSNAFLFCCQIDEDLTARINMADAQFS   45 (153)
Q Consensus         8 ~~~~lh~---~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~   45 (153)
                      ....+|.   .++.|+|+.+.|++++..+.+++.  |||.+
T Consensus        98 ~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~--Df~~~  136 (155)
T cd05120          98 LLAKLHQLPLLVLCHGDLHPGNILVDDGKILGII--DWEYA  136 (155)
T ss_pred             HHHHHhCCCceEEEecCCCcceEEEECCcEEEEE--ecccc
Confidence            4566776   368999999999999987777777  99865

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves

>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=95.77  E-value=0.0038  Score=40.68  Aligned_cols=37  Identities=14%  Similarity=-0.048  Sum_probs=30.3

Q ss_pred             HhhhhcCCCCCCCeeeeeeeecccc-chhhcccccccc
Q psy12581          9 SFYLNSKKSKTSNAFLFCCQIDEDL-TARINMADAQFS   45 (153)
Q Consensus         9 ~~~lh~~~i~~~ni~~~~~~~~~~~-~~kl~~~d~g~~   45 (153)
                      ..-||..|+.|+|+.+.||+++.++ ..++.+.||+.+
T Consensus       131 i~~lH~~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~  168 (206)
T PF06293_consen  131 IAKLHDAGIYHGDLNPSNILVDPDDGQYRFYLIDLDRM  168 (206)
T ss_pred             HHHHHHCcCCCCCCCcccEEEeCCCCceeEEEEcchhc
Confidence            4568999999999999999999875 556666699754

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane

>cd05151 ChoK Choline Kinase (ChoK)

Probab=95.64  E-value=0.0066  Score=37.89  Aligned_cols=36  Identities=14%  Similarity=-0.011  Sum_probs=27.4

Q ss_pred             hHHhhhhcCCC-----CCCCeeeeeeeeccccchhhcccccccc
Q psy12581          7 VYSFYLNSKKS-----KTSNAFLFCCQIDEDLTARINMADAQFS   45 (153)
Q Consensus         7 ~~~~~lh~~~i-----~~~ni~~~~~~~~~~~~~kl~~~d~g~~   45 (153)
                      -++..||+.++     .|+|+.+.|++++ ++.+++.  ||+.+
T Consensus        94 ~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~li--Df~~a  134 (170)
T cd05151          94 KLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLI--DWEYA  134 (170)
T ss_pred             HHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEE--ecccc
Confidence            35667888774     9999999999998 4555555  99864

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph

>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain

Probab=95.40  E-value=0.0061  Score=39.45  Aligned_cols=36  Identities=8%  Similarity=-0.056  Sum_probs=27.0

Q ss_pred             hhh-hcCCCCCCCeeeeeeeeccccchhhccccccccccc
Q psy12581         10 FYL-NSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ   48 (153)
Q Consensus        10 ~~l-h~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~   48 (153)
                      ..+ |+.++.|+|+...||+++. +.+.  +.|||-+...
T Consensus       138 ~~l~H~~glVHGDLs~~NIL~~~-~~v~--iIDF~qav~~  174 (197)
T cd05146         138 KQLYKECNLVHADLSEYNMLWHD-GKVW--FIDVSQSVEP  174 (197)
T ss_pred             HHHHHhCCeecCCCCHHHEEEEC-CcEE--EEECCCceeC
Confidence            334 7889999999999999974 3344  4499976544

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.

>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=95.32  E-value=0.0052  Score=39.48  Aligned_cols=35  Identities=9%  Similarity=0.135  Sum_probs=25.7

Q ss_pred             hhhcCCCCCCCeeeeeeeeccccchhhccccccccccc
Q psy12581         11 YLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ   48 (153)
Q Consensus        11 ~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~   48 (153)
                      -+|..|+.|+|+...||+++.+   ++.++|||.+...
T Consensus       122 ~~~~~givHGDLs~~NIlv~~~---~~~iIDf~qav~~  156 (188)
T PF01163_consen  122 MLHKAGIVHGDLSEYNILVDDG---KVYIIDFGQAVDS  156 (188)
T ss_dssp             HHHCTTEEESS-STTSEEEETT---CEEE--GTTEEET
T ss_pred             HHHhcCceecCCChhhEEeecc---eEEEEecCcceec
Confidence            4678999999999999999887   5555599876543

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.

>PRK09902 hypothetical protein; Provisional

Probab=94.76  E-value=0.01  Score=38.89  Aligned_cols=39  Identities=10%  Similarity=0.047  Sum_probs=31.7

Q ss_pred             hHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccc
Q psy12581          7 VYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFS   45 (153)
Q Consensus         7 ~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~   45 (153)
                      -...-||+.++.|+++.+.||+++.++.+.+.++||.-+
T Consensus       139 ~~ia~LH~~Gv~Hgdly~khIll~~~g~~~v~lIDlEk~  177 (216)
T PRK09902        139 LAFKKMHSVNRQHGCCYVRHIYVKTEGKAEAGFLDLEKS  177 (216)
T ss_pred             HHHHHHHHCCCcCCCCCHhheeecCCCCeeEEEEEhhcc
Confidence            345678999999999999999998777655777799643

>KOG3741|consensus

Probab=92.87  E-value=0.91  Score=34.16  Aligned_cols=118  Identities=14%  Similarity=0.139  Sum_probs=70.9

Q ss_pred             hHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccccCCcccCCcccCccccccCCCCCCcchhhHHHHHHHHHH
Q psy12581          7 VYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQRGRCYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWE   86 (153)
Q Consensus         7 ~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~dv~s~g~~~~~   86 (153)
                      .++.+||+.|+-..-+.+.+|+++.+..++++  -.|+........     .  +.+...      .+.|.-.+|.++..
T Consensus       404 aaL~sIHssGLAck~L~~~kIlv~G~~RIriS--~C~i~Dvl~~d~-----~--~~le~~------Qq~D~~~lG~ll~a  468 (655)
T KOG3741|consen  404 AALYSIHSSGLACKTLDLKKILVTGKMRIRIS--GCGIMDVLQEDP-----T--EPLESQ------QQNDLRDLGLLLLA  468 (655)
T ss_pred             HHHHHHHhcCceeecccHhHeEeeCcceEEEe--cccceeeecCCC-----C--cchhHH------hhhhHHHHHHHHHH
Confidence            46889999999888888899999887655554  444431111111     1  222221      46799999999999


Q ss_pred             HHhCCCC-CCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHH
Q psy12581         87 LATREVP-FADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPIL  148 (153)
Q Consensus        87 ~~~g~~p-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L  148 (153)
                      +.+|..- +......+.-..        ......+.++++++.-....+++. -++.+++..+
T Consensus       469 LAt~~~ns~~~d~~~~s~~~--------~I~~~yS~D~rn~v~yl~s~~~~~-ksI~~llp~~  522 (655)
T KOG3741|consen  469 LATGTENSNRTDSTQSSHLT--------RITTTYSTDLRNVVEYLESLNFRE-KSIQDLLPMI  522 (655)
T ss_pred             HhhcccccccccchHHHHHH--------HhhhhhhHHHHHHHHHHHhcCccc-ccHHHHHHHH
Confidence            9998542 211111111001        112235667777877777777765 5677666443

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=91.46  E-value=0.077  Score=39.79  Aligned_cols=32  Identities=6%  Similarity=-0.308  Sum_probs=24.8

Q ss_pred             hcCCCCCCCeeeeeeeecccc----chhhccccccccc
Q psy12581         13 NSKKSKTSNAFLFCCQIDEDL----TARINMADAQFSF   46 (153)
Q Consensus        13 h~~~i~~~ni~~~~~~~~~~~----~~kl~~~d~g~~~   46 (153)
                      ...|+.|+|+.+.||+++.+|    .+++.  |||+..
T Consensus       277 f~~GffHaDpHPGNIlv~~~g~~~~~i~ll--DFGivg  312 (537)
T PRK04750        277 FRDGFFHADMHPGNIFVSYDPPENPRYIAL--DFGIVG  312 (537)
T ss_pred             HhCCeeeCCCChHHeEEecCCCCCCeEEEE--ecceEE
Confidence            457888888888888998877    55555  999873

>KOG1093|consensus

Probab=91.00  E-value=0.15  Score=38.19  Aligned_cols=72  Identities=21%  Similarity=0.141  Sum_probs=42.9

Q ss_pred             cchhhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhcccc-----------CCCCCCCHHHHHHHHHHhcCCCCCCCC
Q psy12581         72 LEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRI-----------TIPPGISSHLSKLIRICMNEDPGKRPT  140 (153)
Q Consensus        72 ~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~l~~~cl~~~p~~Rps  140 (153)
                      .+++|||++|.++.++.-|..-+......+....+. +-...           .....++.....+..+|+-..|..||.
T Consensus       109 ~pKsdVwsl~~i~~el~L~~~l~~~~~~s~~l~~i~-k~~~~d~~~~~~a~e~~~~~~~d~~~~~~~~~c~~~~~~ir~l  187 (725)
T KOG1093|consen  109 GPKSDVWSLGFIILELYLGISLEAELTESEYLEILL-KYYTDDQELLSTAMEHLIQLLADKKRLPLLKKCLWLEPIIRPL  187 (725)
T ss_pred             CcchhhhhHHHHHHHHHHhhHHHHHHHHHHHHHHHH-HhccCchhHHHHHHHHHHHHhhhHhHHHHhccCCccccccccc
Confidence            378999999999999877755443322222211111 00000           011234566778888899999998886


Q ss_pred             HHHH
Q psy12581        141 FDMV  144 (153)
Q Consensus       141 ~~~~  144 (153)
                      ..++
T Consensus       188 ~~~~  191 (725)
T KOG1093|consen  188 PMEL  191 (725)
T ss_pred             hhHH
Confidence            5544

>KOG0592|consensus

Probab=89.95  E-value=0.15  Score=37.91  Aligned_cols=31  Identities=23%  Similarity=0.121  Sum_probs=25.5

Q ss_pred             hHHhhhhcCCCCCCCeeee---eeeeccccchhh
Q psy12581          7 VYSFYLNSKKSKTSNAFLF---CCQIDEDLTARI   37 (153)
Q Consensus         7 ~~~~~lh~~~i~~~ni~~~---~~~~~~~~~~kl   37 (153)
                      +|..-+-|||+||+||+++   .|.|++-|.+|+
T Consensus       190 lH~~GIIHRDlKPENILLd~dmhikITDFGsAK~  223 (604)
T KOG0592|consen  190 LHSNGIIHRDLKPENILLDKDGHIKITDFGSAKI  223 (604)
T ss_pred             HHhcCceeccCChhheeEcCCCcEEEeecccccc
Confidence            5566677899999999995   688888888876

>KOG1290|consensus

Probab=88.92  E-value=0.17  Score=37.33  Aligned_cols=31  Identities=6%  Similarity=-0.148  Sum_probs=24.2

Q ss_pred             ccchhhHHhhhhc-CCCCCCCeeeeeeeeccc
Q psy12581          2 KKKKIVYSFYLNS-KKSKTSNAFLFCCQIDED   32 (153)
Q Consensus         2 ~~~~~~~~~~lh~-~~i~~~ni~~~~~~~~~~   32 (153)
                      |.-.-+.+.|||. .+|+|.+|++.||++..+
T Consensus       193 ~~qvL~GLdYLH~ecgIIHTDlKPENvLl~~~  224 (590)
T KOG1290|consen  193 CRQVLTGLDYLHRECGIIHTDLKPENVLLCST  224 (590)
T ss_pred             HHHHHHHHHHHHHhcCccccCCCcceeeeecc
Confidence            4445678899996 688999999988888655

>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY)

Probab=87.36  E-value=0.32  Score=32.29  Aligned_cols=34  Identities=15%  Similarity=-0.077  Sum_probs=27.0

Q ss_pred             HHhhhhcCCCCCCCeeeeeeeeccccchhhccccccc
Q psy12581          8 YSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQF   44 (153)
Q Consensus         8 ~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~   44 (153)
                      ...-||..|+.|+|..+.|++++.++ +++.  |++.
T Consensus       147 ~ikqlH~~G~~HGD~hpgNFlv~~~~-i~iI--D~~~  180 (229)
T PF06176_consen  147 AIKQLHKHGFYHGDPHPGNFLVSNNG-IRII--DTQG  180 (229)
T ss_pred             HHHHHHHcCCccCCCCcCcEEEECCc-EEEE--ECcc
Confidence            35678999999999999999988765 4454  8864

The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process

>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]

Probab=87.02  E-value=0.24  Score=33.95  Aligned_cols=27  Identities=15%  Similarity=0.021  Sum_probs=25.1

Q ss_pred             cCCCCCCCeeeeeeeeccccchhhccccc
Q psy12581         14 SKKSKTSNAFLFCCQIDEDLTARINMADA   42 (153)
Q Consensus        14 ~~~i~~~ni~~~~~~~~~~~~~kl~~~d~   42 (153)
                      +.|++|+|+.-.||+++++|.+.+.  ||
T Consensus       220 ~~GiVHGDlSefNIlV~~dg~~~vI--Dw  246 (304)
T COG0478         220 RRGIVHGDLSEFNILVTEDGDIVVI--DW  246 (304)
T ss_pred             HcCccccCCchheEEEecCCCEEEE--eC
Confidence            5899999999999999999988888  98

>KOG1035|consensus

Probab=86.79  E-value=1.6  Score=36.06  Aligned_cols=106  Identities=19%  Similarity=0.226  Sum_probs=59.5

Q ss_pred             ccccchhhcccccccccccCCcc------cCCcccCccccccCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCchhhh
Q psy12581         30 DEDLTARINMADAQFSFQQRGRC------YYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVG  103 (153)
Q Consensus        30 ~~~~~~kl~~~d~g~~~~~~~~~------~~~~~~~pe~~~~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~  103 (153)
                      +.+++....+.||+.........      .+..+-+++...... .......|+|.+|.....+..|..+-.-..   ..
T Consensus       323 ~~e~~~~~sl~~~~ss~~l~d~~~~~~~~~~~~~~~~e~~~~~~-~~~~r~~dL~~lgll~~~~~~~~~i~~~~~---~~  398 (1351)
T KOG1035|consen  323 DGEGVVAISLSDFDSSKPLPDNEKSFSDLLAEIRNADEDLKENT-AKKSRLTDLWCLGLLLLQLSQGEDISEKSA---VP  398 (1351)
T ss_pred             CccceeecchhhhcccccCCCcccchhhcCcccccccccccccc-chhhhhhHHHHHHHHHhhhhhcCccccccc---ch
Confidence            45555555555776654332221      223445555544321 123355799999999988876644321110   00


Q ss_pred             HHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHH
Q psy12581        104 MKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPI  147 (153)
Q Consensus       104 ~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~  147 (153)
                      ...        .+........+...+|+..+++.|+++.+++..
T Consensus       399 ~~~--------l~~~~~~~~~d~~~~~~~~~~~~Rl~~~~ll~~  434 (1351)
T KOG1035|consen  399 VSL--------LDVLSTSELLDALPKCLDEDSEERLSALELLTH  434 (1351)
T ss_pred             hhh--------hccccchhhhhhhhhhcchhhhhccchhhhhhc
Confidence            000        011112267788889999999999999888754

>KOG0615|consensus

Probab=83.61  E-value=0.85  Score=33.10  Aligned_cols=32  Identities=19%  Similarity=0.105  Sum_probs=24.5

Q ss_pred             hHHhhhhcCCCCCCCeeeee------eeeccccchhhc
Q psy12581          7 VYSFYLNSKKSKTSNAFLFC------CQIDEDLTARIN   38 (153)
Q Consensus         7 ~~~~~lh~~~i~~~ni~~~~------~~~~~~~~~kl~   38 (153)
                      +|..-+.||||||+||++++      +.|++-|..|+.
T Consensus       292 LH~~GI~HRDiKPeNILl~~~~e~~llKItDFGlAK~~  329 (475)
T KOG0615|consen  292 LHSQGIIHRDIKPENILLSNDAEDCLLKITDFGLAKVS  329 (475)
T ss_pred             HHHcCcccccCCcceEEeccCCcceEEEecccchhhcc
Confidence            45666788999999999954      456777878774

>KOG0599|consensus

Probab=81.80  E-value=0.91  Score=31.37  Aligned_cols=28  Identities=14%  Similarity=0.078  Sum_probs=21.2

Q ss_pred             hHHhhhhcCCCCCCCeee---eeeeeccccc
Q psy12581          7 VYSFYLNSKKSKTSNAFL---FCCQIDEDLT   34 (153)
Q Consensus         7 ~~~~~lh~~~i~~~ni~~---~~~~~~~~~~   34 (153)
                      ++-..+.|||+||+||++   .||.+++-|-
T Consensus       139 lHa~~IVHRDLKpENILlddn~~i~isDFGF  169 (411)
T KOG0599|consen  139 LHARNIVHRDLKPENILLDDNMNIKISDFGF  169 (411)
T ss_pred             HHHhhhhhcccChhheeeccccceEEeccce
Confidence            455677889999999999   3677765543

>KOG0612|consensus

Probab=81.35  E-value=0.4  Score=39.04  Aligned_cols=23  Identities=17%  Similarity=0.173  Sum_probs=18.2

Q ss_pred             ccchhhHHhhhhcCCCCCCCeeee
Q psy12581          2 KKKKIVYSFYLNSKKSKTSNAFLF   25 (153)
Q Consensus         2 ~~~~~~~~~~lh~~~i~~~ni~~~   25 (153)
                      ++|...-..|+| |||||.|++++
T Consensus       187 AldslH~mgyVH-RDiKPDNvLld  209 (1317)
T KOG0612|consen  187 ALDSLHSMGYVH-RDIKPDNVLLD  209 (1317)
T ss_pred             HHHHHHhcccee-ccCCcceeEec
Confidence            566666677777 89999999984

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	153
3kmw_A	271	Crystal Structure Of The IlkALPHA-Parvin Core Compl		5e-53
3kmu_A	271	Crystal Structure Of The IlkALPHA-Parvin Core Compl		1e-47
3p86_A	309	Crystal Structure Of Ctr1 Kinase Domain Mutant D676		3e-14
3ppz_A	309	Crystal Structure Of Ctr1 Kinase Domain In Complex		3e-14
3dtc_A	271	Crystal Structure Of Mixed-Lineage Kinase Mlk1 Comp		2e-12
2qok_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		2e-11
3ekk_A	307	Insulin Receptor Kinase Complexed With An Inhibitor		5e-11
2gsf_A	373	The Human Epha3 Receptor Tyrosine Kinase And Juxtam		5e-11
2qof_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f		5e-11
2qod_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y602f		5e-11
1p14_A	306	Crystal Structure Of A Catalytic-Loop Mutant Of The		5e-11
3fxx_A	371	Human Epha3 Kinase And Juxtamembrane Region Bound T		5e-11
2qo7_A	373	Human Epha3 Kinase And Juxtamembrane Region, Dephos		6e-11
3dzq_A	361	Human Epha3 Kinase Domain In Complex With Inhibitor		6e-11
2qoi_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		6e-11
2qoc_A	344	Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp		6e-11
2qob_A	344	Human Epha3 Kinase Domain, Base Structure Length =		6e-11
2qol_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596:y		6e-11
2qoo_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		6e-11
2qon_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		6e-11
1mqb_A	333	Crystal Structure Of Ephrin A2 (Epha2) Receptor Pro		6e-11
2rei_A	318	Kinase Domain Of Human Ephrin Type-a Receptor 7 (ep		7e-11
3eta_A	317	Kinase Domain Of Insulin Receptor Complexed With A		3e-10
3lvp_A	336	Crystal Structure Of Bisphosphorylated Igf1-R Kinas		3e-10
1irk_A	306	Crystal Structure Of The Tyrosine Kinase Domain Of		3e-10
1jqh_A	308	Igf-1 Receptor Kinase Domain Length = 308		3e-10
3lw0_A	304	Igf-1rk In Complex With Ligand Msc1609119a-1 Length		3e-10
3o23_A	305	Human Unphosphorylated Igf1-R Kinase Domain In Comp		3e-10
3d94_A	301	Crystal Structure Of The Insulin-Like Growth Factor		3e-10
2oj9_A	307	Structure Of Igf-1r Kinase Domain Complexed With A		3e-10
3qqu_A	301	Cocrystal Structure Of Unphosphorylated Igf With Py		3e-10
3i81_A	315	Crystal Structure Of Insulin-Like Growth Factor 1 R		3e-10
1i44_A	306	Crystallographic Studies Of An Activation Loop Muta		4e-10
2r2p_A	295	Kinase Domain Of Human Ephrin Type-A Receptor 5 (Ep		4e-10
1m7n_A	322	Crystal Structure Of Unactivated Apo Insulin-Like G		4e-10
1p4o_A	322	Structure Of Apo Unactivated Igf-1r Kinase Domain A		4e-10
3kul_A	325	Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep		5e-10
1rqq_A	306	Crystal Structure Of The Insulin Receptor Kinase In		9e-10
3pls_A	298	Ron In Complex With Ligand Amp-Pnp Length = 298		1e-09
2z8c_A	303	Phosphorylated Insulin Receptor Tyrosine Kinase In		1e-09
1ir3_A	306	Phosphorylated Insulin Receptor Tyrosine Kinase In		2e-09
2zm3_A	308	Complex Structure Of Insulin-Like Growth Factor Rec		2e-09
1k3a_A	299	Structure Of The Insulin-Like Growth Factor 1 Recep		2e-09
3kul_B	325	Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep		2e-09
2xyu_A	285	Crystal Structure Of Epha4 Kinase Domain In Complex		4e-09
2y6m_A	291	Crystal Structure Of Epha4 Kinase Domain Length = 2		4e-09
2hel_A	306	Crystal Structure Of A Mutant Epha4 Kinase Domain (		4e-09
3rhx_B	306	Crystal Structure Of The Catalytic Domain Of Fgfr1		6e-09
1fgk_A	310	Crystal Structure Of The Tyrosine Kinase Domain Of		6e-09
4f1m_A	287	Crystal Structure Of The G1179s Roco4 Kinase Domain		6e-09
3tt0_A	382	Co-Structure Of Fibroblast Growth Factor Receptor 1		6e-09
4f63_A	309	Crystal Structure Of Human Fibroblast Growth Factor		6e-09
3c4f_A	302	Fgfr Tyrosine Kinase Domain In Complex With 3-(3- M		7e-09
3js2_A	317	Crystal Structure Of Minimal Kinase Domain Of Fibro		7e-09
3kxx_A	317	Structure Of The Mutant Fibroblast Growth Factor Re		7e-09
3gql_A	326	Crystal Structure Of Activated Receptor Tyrosine Ki		7e-09
4f0f_A	287	Crystal Structure Of The Roco4 Kinase Domain Bound		8e-09
3gqi_A	326	Crystal Structure Of Activated Receptor Tyrosine Ki		1e-08
3mpm_A	267	Lck Complexed With A Pyrazolopyrimidine Length = 26		1e-08
3b2t_A	311	Structure Of Phosphotransferase Length = 311		1e-08
3ri1_A	313	Crystal Structure Of The Catalytic Domain Of Fgfr2		1e-08
1gjo_A	316	The Fgfr2 Tyrosine Kinase Domain Length = 316		1e-08
3bys_A	277	Co-Crystal Structure Of Lck And Aminopyrimidine Ami		1e-08
2pzr_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		1e-08
2pwl_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		1e-08
2pvy_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		1e-08
2ofv_A	277	Crystal Structure Of Aminoquinazoline 1 Bound To Lc		1e-08
2og8_A	265	Crystal Structure Of Aminoquinazoline 36 Bound To L		1e-08
1qpd_A	279	Structural Analysis Of The Lymphocyte-specific Kina		1e-08
2py3_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		1e-08
2q0b_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		1e-08
2pzp_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		1e-08
2pz5_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		2e-08
2of2_A	271	Crystal Structure Of Furanopyrimidine 8 Bound To Lc		2e-08
2pl0_A	289	Lck Bound To Imatinib Length = 289		2e-08
2psq_A	370	Crystal Structure Of Unphosphorylated Unactivated W		2e-08
4f1o_A	287	Crystal Structure Of The L1180t Mutant Roco4 Kinase		2e-08
3cly_A	334	Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase		2e-08
2pvf_A	334	Crystal Structure Of Tyrosine Phosphorylated Activa		2e-08
2eva_A	307	Structural Basis For The Interaction Of Tak1 Kinase		2e-08
4gs6_A	315	Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxoz		2e-08
2hen_A	286	Crystal Structure Of The Ephb2 Receptor Kinase Doma		2e-08
1jpa_A	312	Crystal Structure Of Unphosphorylated Ephb2 Recepto		3e-08
2zm1_A	285	Crystal Structure Of Imidazo Pyrazin 1 Bound To The		4e-08
3kxz_A	287	The Complex Crystal Structure Of Lck With A Probe M		5e-08
1qpe_A	279	Structural Analysis Of The Lymphocyte-Specific Kina		5e-08
2ofu_A	273	X-Ray Crystal Structure Of 2-Aminopyrimidine Carbam		5e-08
3bym_A	272	X-Ray Co-Crystal Structure Aminobenzimidazole Triaz		5e-08
3lck_A	271	The Kinase Domain Of Human Lymphocyte Kinase (Lck),		5e-08
3kmm_A	288	Structure Of Human Lck Kinase With A Small Molecule		6e-08
2wqb_A	324	Structure Of The Tie2 Kinase Domain In Complex With		7e-08
2oo8_X	317	Synthesis, Structural Analysis, And Sar Studies Of		8e-08
1fvr_A	327	Tie2 Kinase Domain Length = 327		9e-08
2rfn_A	310	X-ray Structure Of C-met With Inhibitor. Length = 3		1e-07
3f66_A	298	Human C-Met Kinase In Complex With Quinoxaline Inhi		1e-07
4gg5_A	319	Crystal Structure Of Cmet In Complex With Novel Inh		1e-07
3q6u_A	308	Structure Of The Apo Met Receptor Kinase In The Dua		1e-07
2wgj_A	306	X-Ray Structure Of Pf-02341066 Bound To The Kinase		1e-07
2wd1_A	292	Human C-Met Kinase In Complex With Azaindole Inhibi		1e-07
3i5n_A	309	Crystal Structure Of C-Met With Triazolopyridazine		1e-07
3lq8_A	302	Structure Of The Kinase Domain Of C-Met Bound To Xl		1e-07
2g15_A	318	Structural Characterization Of Autoinhibited C-Met		1e-07
3sxr_A	268	Crystal Structure Of Bmx Non-Receptor Tyrosine Kina		1e-07
1r0p_A	312	Crystal Structure Of The Tyrosine Kinase Domain Of		1e-07
3qti_A	314	C-Met Kinase In Complex With Nvp-Bvu972 Length = 31		1e-07
3a4p_A	319	Human C-Met Kinase Domain Complexed With 6-Benzylox		1e-07
3cth_A	314	Crystal Structure Of The Tyrosine Kinase Domain Of		2e-07
3dkc_A	317	Sgx Clone 5698a65kfg1h1 Length = 317		2e-07
4aw5_A	291	Complex Of The Ephb4 Kinase Domain With An Oxindole		2e-07
3dkg_A	317	Sgx Clone 5698a109kfg1h1 Length = 317		2e-07
3c1x_A	373	Crystal Structure Of The Tyrosine Kinase Domain Of		2e-07
2vwu_A	302	Ephb4 Kinase Domain Inhibitor Complex Length = 302		2e-07
3d7u_B	277	Structural Basis For The Recognition Of C-Src By It		2e-07
3g6h_A	286	Src Thr338ile Inhibited In The Dfg-Asp-Out Conforma		2e-07
3oez_A	286	Crystal Structure Of The L317i Mutant Of The Chicke		2e-07
2oiq_A	286	Crystal Structure Of Chicken C-Src Kinase Domain In		3e-07
3svv_A	286	Crystal Structure Of T338c C-Src Covalently Bound T		3e-07
3u4w_A	275	Src In Complex With Dna-Templated Macrocyclic Inhib		3e-07
2hwo_A	286	Crystal Structure Of Src Kinase Domain In Complex W		3e-07
3geq_A	286	Structural Basis For The Chemical Rescue Of Src Kin		3e-07
2qq7_A	286	Crystal Structure Of Drug Resistant Src Kinase Doma		3e-07
2vwi_A	303	Structure Of The Osr1 Kinase, A Hypertension Drug T		3e-07
3dak_A	290	Crystal Structure Of Domain-Swapped Osr1 Kinase Dom		3e-07
3q6w_A	307	Structure Of Dually-phosphorylated Met Receptor Kin		4e-07
2ptk_A	453	Chicken Src Tyrosine Kinase Length = 453		4e-07
3ggf_A	301	Crystal Structure Of Human SerineTHREONINE-Protein		4e-07
1ksw_A	452	Structure Of Human C-Src Tyrosine Kinase (Thr338gly		5e-07
1y57_A	452	Structure Of Unphosphorylated C-Src In Complex With		5e-07
3oct_A	265	Crystal Structure Of Bruton's Tyrosine Kinase Mutan		5e-07
1fmk_A	452	Crystal Structure Of Human Tyrosine-Protein Kinase		5e-07
2h8h_A	535	Src Kinase In Complex With A Quinazoline Inhibitor		6e-07
1yol_A	283	Crystal Structure Of Src Kinase Domain In Complex W		7e-07
2bdf_A	279	Src Kinase In Complex With Inhibitor Ap23451 Length		7e-07
3g0e_A	336	Kit Kinase Domain In Complex With Sunitinib Length		7e-07
3v5j_A	266	Crystal Structure Of Interleukin-2 Inducible T-Cell		8e-07
3g0f_A	336	Kit Kinase Domain Mutant D816h In Complex With Suni		8e-07
1t46_A	313	Structural Basis For The Autoinhibition And Sti-571		8e-07
1t45_A	331	Structural Basis For The Autoinhibition And Sti-571		8e-07
4hct_A	269	Crystal Structure Of Itk In Complex With Compound 5		8e-07
3miy_A	266	X-Ray Crystal Structure Of Itk Complexed With Sunit		8e-07
1sm2_A	264	Crystal Structure Of The Phosphorylated Interleukin		8e-07
1pkg_A	329	Structure Of A C-kit Kinase Product Complex Length		9e-07
3t9t_A	267	Crystal Structure Of Btk Mutant (F435t,K596r) Compl		9e-07
3qgw_A	286	Crystal Structure Of Itk Kinase Bound To An Inhibit		1e-06
3dqw_A	286	C-Src Kinase Domain Thr338ile Mutant In Complex Wit		1e-06
2xik_A	294	Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related K		1e-06
3zhp_C	294	Human Mst3 (stk24) In Complex With Mo25beta Length		1e-06
3pix_A	274	Crystal Structure Of Btk Kinase Domain Complexed Wi		1e-06
1k2p_A	263	Crystal Structure Of Bruton's Tyrosine Kinase Domai		1e-06
3ocs_A	271	Crystal Structure Of Bruton's Tyrosine Kinase In Co		1e-06
2jkm_A	276	Focal Adhesion Kinase Catalytic Domain In Complex W		1e-06
2j0m_B	276	Crystal Structure A Two-Chain Complex Between The F		1e-06
3p08_A	267	Crystal Structure Of The Human Btk Kinase Domain Le		1e-06
4ebw_A	304	Structure Of Focal Adhesion Kinase Catalytic Domain		1e-06
2jkk_A	276	Focal Adhesion Kinase Catalytic Domain In Complex W		1e-06
3gen_A	283	The 1.6 A Crystal Structure Of Human Bruton's Tyros		1e-06
3pxk_A	282	Focal Adhesion Kinase Catalytic Domain In Complex W		1e-06
3ckx_A	304	Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3		1e-06
3ckw_A	304	Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3		1e-06
2j0j_A	656	Crystal Structure Of A Fragment Of Focal Adhesion K		1e-06
2j0k_A	656	Crystal Structure Of A Fragment Of Focal Adhesion K		1e-06
2etm_A	281	Crystal Structure Of Focal Adhesion Kinase Domain C		1e-06
2gng_A	350	Protein Kinase A Fivefold Mutant Model Of Rho-Kinas		1e-06
1mp8_A	281	Crystal Structure Of Focal Adhesion Kinase (Fak) Le		1e-06
1yoj_A	283	Crystal Structure Of Src Kinase Domain Length = 283		1e-06
3bz3_A	276	Crystal Structure Analysis Of Focal Adhesion Kinase		1e-06
2gnf_A	350	Protein Kinase A Fivefold Mutant Model Of Rho-Kinas		1e-06
2gnj_A	350	Pka Three Fold Mutant Model Of Rho-Kinase With Y-27		1e-06
3a7f_A	303	Human Mst3 Kinase Length = 303		1e-06
3ama_A	351	Protein Kinase A Sixfold Mutant Model Of Aurora B W		2e-06
3k54_A	283	Structures Of Human Bruton's Tyrosine Kinase In Act		2e-06
2qr8_A	342	2.0a X-ray Structure Of C-terminal Kinase Domain Of		2e-06
3a4o_X	286	Lyn Kinase Domain Length = 286		2e-06
1qcf_A	454	Crystal Structure Of Hck In Complex With A Src Fami		2e-06
3dk3_A	293	Crystal Structure Of Mutant Abl Kinase Domain In Co		2e-06
2hk5_A	270	Hck Kinase In Complex With Lck Targetted Inhibitor		2e-06
3dk7_A	277	Crystal Structure Of Mutant Abl Kinase Domain In Co		2e-06
1luf_A	343	Crystal Structure Of The Musk Tyrosine Kinase: Insi		2e-06
3dk6_A	293	Crystal Structure Of Mutant Abl Kinase Domain In Co		2e-06
1ad5_A	438	Src Family Kinase Hck-Amp-Pnp Complex Length = 438		2e-06
2wqm_A	310	Structure Of Apo Human Nek7 Length = 310		2e-06
2dq7_X	283	Crystal Structure Of Fyn Kinase Domain Complexed Wi		3e-06
2j0l_A	276	Crystal Structure Of A The Active Conformation Of T		3e-06
2qr7_A	342	2.0a X-Ray Structure Of C-Terminal Kinase Domain Of		3e-06
1yi6_A	276	C-Term Tail Segment Of Human Tyrosine Kinase (258-5		3e-06
2uzt_A	336	Pka Structures Of Akt, Indazole-Pyridine Inhibitors		3e-06
4ae9_A	343	Structure And Function Of The Human Sperm-specific		3e-06
4ae6_A	343	Structure And Function Of The Human Sperm-specific		3e-06
3pvb_A	345	Crystal Structure Of (73-244)ria:c Holoenzyme Of Ca		3e-06
1l3r_E	350	Crystal Structure Of A Transition State Mimic Of Th		4e-06
2qcs_A	350	A Complex Structure Between The Catalytic And Regul		4e-06
1bkx_A	350	A Binary Complex Of The Catalytic Subunit Of Camp-D		4e-06
1xh7_A	350	Crystal Structures Of Protein Kinase B Selective In		4e-06
3qup_A	323	Inhibitor Bound Structure Of The Kinase Domain Of T		4e-06
1apm_E	350	2.0 Angstrom Refined Crystal Structure Of The Catal		4e-06
2erz_E	351	Crystal Structure Of C-amp Dependent Kinase (pka) B		4e-06
2f7e_E	351	Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoqu		4e-06
1svh_A	350	Crystal Structure Of Protein Kinase A In Complex Wi		4e-06
1fmo_E	350	Crystal Structure Of A Polyhistidine-Tagged Recombi		4e-06
4dfx_E	350	Crystal Structure Of Myristoylated K7c Catalytic Su		4e-06
1cmk_E	350	Crystal Structures Of The Myristylated Catalytic Su		4e-06
2gu8_A	337	Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel		4e-06
1q8w_A	350	The Catalytic Subunit Of Camp-Dependent Protein Kin		4e-06
1stc_E	350	Camp-Dependent Protein Kinase, Alpha-Catalytic Subu		4e-06
3nx8_A	351	Human Camp Dependent Protein Kinase In Complex With		4e-06
3dnd_A	350	Camp-Dependent Protein Kinase Pka Catalytic Subunit		4e-06
2jds_A	351	Structure Of Camp-Dependent Protein Kinase Complexe		4e-06
1ydt_E	350	Structure Of Camp-Dependent Protein Kinase, Alpha-C		4e-06
2c1a_A	351	Structure Of Camp-Dependent Protein Kinase Complexe		4e-06
1jbp_E	350	Crystal Structure Of The Catalytic Subunit Of Camp-		4e-06
3agl_A	351	Complex Of Pka With The Bisubstrate Protein Kinase		4e-06
4dg3_E	371	Crystal Structure Of R336a Mutant Of Camp-dependent		4e-06
1q24_A	350	Pka Double Mutant Model Of Pkb In Complex With Mgat		4e-06
1ctp_E	350	Structure Of The Mammalian Catalytic Subunit Of Cam		4e-06
1cdk_A	350	Camp-Dependent Protein Kinase Catalytic Subunit (E.		4e-06
3agm_A	351	Complex Of Pka With The Bisubstrate Protein Kinase		4e-06
3mvj_A	371	Human Cyclic Amp-Dependent Protein Kinase Pka Inhib		4e-06
3o7l_B	350	Crystal Structure Of Phospholamban (1-19):pka C-Sub		4e-06
2qur_A	350	Crystal Structure Of F327aK285P MUTANT OF CAMP-Depe		4e-06
1szm_A	350	Dual Binding Mode Of Bisindolylmaleimide 2 To Prote		4e-06
1q61_A	350	Pka Triple Mutant Model Of Pkb Length = 350		4e-06
2vo0_A	351	Structure Of Pka-Pkb Chimera Complexed With C-(4-(4		4e-06
2uvy_A	351	Structure Of Pka-pkb Chimera Complexed With Methyl-		4e-06
3l9m_A	351	Crystal Structure Of Pkab3 (Pka Triple Mutant V123a		5e-06
2jdt_A	351	Structure Of Pka-Pkb Chimera Complexed With Isoquin		5e-06
4fvr_A	289	Crystal Structure Of The Jak2 Pseudokinase Domain M		5e-06
4fvp_A	289	Crystal Structure Of The Jak2 Pseudokinase Domain (		5e-06
2zv7_A	279	Lyn Tyrosine Kinase Domain, Apo Form Length = 279		6e-06
3bkb_A	377	Crystal Structure Of Human Feline Sarcoma Viral Onc		7e-06
2fo0_A	495	Organization Of The Sh3-Sh2 Unit In Active And Inac		8e-06
1opl_A	537	Structural Basis For The Auto-Inhibition Of C-Abl T		8e-06
1opk_A	495	Structural Basis For The Auto-Inhibition Of C-Abl T		9e-06
1syk_A	350	Crystal Structure Of E230q Mutant Of Camp-Dependent		9e-06
1j3h_A	350	Crystal Structure Of Apoenzyme Camp-Dependent Prote		1e-05
3fhi_A	350	Crystal Structure Of A Complex Between The Catalyti		1e-05
2wnt_A	330	Crystal Structure Of The Human Ribosomal Protein S6		1e-05
3cd3_A	377	Crystal Structure Of Phosphorylated Human Feline Sa		1e-05
3gvu_A	292	The Crystal Structure Of Human Abl2 In Complex With		1e-05
1k9a_A	450	Crystal Structure Analysis Of Full-Length Carboxyl-		1e-05
3rny_A	346	Crystal Structure Of Human Rsk1 C-Terminal Kinase D		1e-05
2g2f_A	287	A Src-Like Inactive Conformation In The Abl Tyrosin		1e-05
2f4j_A	287	Structure Of The Kinase Domain Of An Imatinib-Resis		1e-05
2z60_A	288	Crystal Structure Of The T315i Mutant Of Abl Kinase		1e-05
2ivs_A	314	Crystal Structure Of Non-Phosphorylated Ret Tyrosin		1e-05
2qoh_A	288	Crystal Structure Of Abl Kinase Bound With Ppy-a Le		1e-05
3pyy_A	298	Discovery And Characterization Of A Cell-Permeable,		1e-05
2g1t_A	287	A Src-Like Inactive Conformation In The Abl Tyrosin		1e-05
2hyy_A	273	Human Abl Kinase Domain In Complex With Imatinib (S		1e-05
2hz0_A	270	Abl Kinase Domain In Complex With Nvp-Aeg082 Length		1e-05
3vw6_A	269	Crystal Structure Of Human Apoptosis Signal-Regulat		1e-05
2hiw_A	287	Crystal Structure Of Inactive Conformation Abl Kina		1e-05
2clq_A	295	Structure Of Mitogen-Activated Protein Kinase Kinas		1e-05
2hzi_A	277	Abl Kinase Domain In Complex With Pd180970 Length =		1e-05
3oxz_A	284	Crystal Structure Of Abl Kinase Domain Bound With A		1e-05
3qrj_A	277	The Crystal Structure Of Human Abl1 Kinase Domain T		2e-05
3oy3_A	284	Crystal Structure Of Abl T315i Mutant Kinase Domain		2e-05
3qri_A	277	The Crystal Structure Of Human Abl1 Kinase Domain I		2e-05
2e2b_A	293	Crystal Structure Of The C-Abl Kinase Domain In Com		2e-05
1fpu_A	293	Crystal Structure Of Abl Kinase Domain In Complex W		2e-05
1rdq_E	350	Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of		2e-05
4hzs_A	341	Crystal Structure Of Ack1 Kinase Domain With C-term		2e-05
3qal_E	350	Crystal Structure Of Arg280ala Mutant Of Catalytic		2e-05
4id7_A	273	Ack1 Kinase In Complex With The Inhibitor Cis-3-[8-		2e-05
3eqp_B	276	Crystal Structure Of Ack1 With Compound T95 Length		2e-05
2p0c_A	313	Catalytic Domain Of The Proto-Oncogene Tyrosine-Pro		2e-05
4hzr_A	277	Crystal Structure Of Ack1 Kinase Domain Length = 27		2e-05
4a4x_A	279	Nek2-Ede Bound To Cct248662 Length = 279		2e-05
2ivt_A	314	Crystal Structure Of Phosphorylated Ret Tyrosine Ki		2e-05
2ivv_A	314	Crystal Structure Of Phosphorylated Ret Tyrosine Ki		2e-05
3qam_E	350	Crystal Structure Of Glu208ala Mutant Of Catalytic		2e-05
1u46_A	291	Crystal Structure Of The Unphosphorylated Kinase Do		2e-05
1smh_A	350	Protein Kinase A Variant Complex With Completely Or		2e-05
2gqg_A	278	X-Ray Crystal Structure Of Dasatinib (Bms-354825) B		2e-05
1xh9_A	350	Crystal Structures Of Protein Kinase B Selective In		2e-05
2v7a_A	286	Crystal Structure Of The T315i Abl Mutant In Comple		2e-05
1byg_A	278	Kinase Domain Of Human C-Terminal Src Kinase (Csk)		3e-05
3d7u_A	263	Structural Basis For The Recognition Of C-Src By It		3e-05
4dfy_A	371	Crystal Structure Of R194a Mutant Of Camp-Dependent		3e-05
2w5a_A	279	Human Nek2 Kinase Adp-Bound Length = 279		3e-05
2jav_A	279	Human Kinase With Pyrrole-Indolinone Ligand Length		3e-05
4ewh_B	275	Co-Crystal Structure Of Ack1 With Inhibitor Length		3e-05
2f57_A	317	Crystal Structure Of The Human P21-activated Kinase		4e-05
1fot_A	318	Structure Of The Unliganded Camp-Dependent Protein		4e-05
1u54_A	291	Crystal Structures Of The Phosphorylated And Unphos		4e-05
3lxk_A	327	Structural And Thermodynamic Characterization Of Th		4e-05
2j7t_A	302	Crystal Structure Of Human Serine Threonine Kinase-		4e-05
4hvd_A	314	Jak3 Kinase Domain In Complex With 2-cyclopropyl-5h		5e-05
4bc6_A	293	Crystal Structure Of Human Serine Threonine Kinase-		5e-05
3r1n_A	317	Mk3 Kinase Bound To Compound 5b Length = 317		6e-05
3fhr_A	336	High Resolution Crystal Structure Of Mitogen-Activa		7e-05
2uv2_A	287	Crystal Structure Of Human Ste20-Like Kinase Bound		8e-05
3u6j_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		8e-05
3cjf_A	309	Crystal Structure Of Vegfr2 In Complex With A 3,4,5		9e-05
2yhv_A	342	Structure Of L1196m Mutant Anaplastic Lymphoma Kina		9e-05
2yjs_A	342	Structure Of C1156y Mutant Anaplastic Lymphoma Kina		9e-05
3ewh_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		9e-05
2jfl_A	325	Crystal Structure Of Human Ste20-Like Kinase ( Diph		9e-05
4dce_A	333	Crystal Structure Of Human Anaplastic Lymphoma Kina		1e-04
3mdy_A	337	Crystal Structure Of The Cytoplasmic Domain Of The		1e-04
2jfm_A	325	Crystal Structure Of Human Ste20-Like Kinase (Unlig		1e-04
2j51_A	325	Crystal Structure Of Human Ste20-Like Kinase Bound		1e-04
4fnx_A	327	Crystal Structure Of The Apo R1275q Anaplastic Lymp		1e-04
3aox_A	344	X-Ray Crystal Structure Of Human Anaplastic Lymphom		1e-04
2yjr_A	342	Structure Of F1174l Mutant Anaplastic Lymphoma Kina		1e-04
4fnz_A	327	Crystal Structure Of Human Anaplastic Lymphoma Kina		1e-04
4fnw_A	327	Crystal Structure Of The Apo F1174l Anaplastic Lymp		1e-04
2p2h_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		1e-04
3vhk_A	368	Crystal Structure Of The Vegfr2 Kinase Domain In Co		1e-04
4fob_A	353	Crystal Structure Of Human Anaplastic Lymphoma Kina		1e-04
3vhe_A	359	Crystal Structure Of Human Vegfr2 Kinase Domain Wit		1e-04
3vid_A	356	Crystal Structure Of Human Vegfr2 Kinase Domain Wit		1e-04
1y6a_A	366	Crystal Structure Of Vegfr2 In Complex With A 2-Ani		1e-04
2xb7_A	315	Structure Of Human Anaplastic Lymphoma Kinase In Co		1e-04
2xp2_A	327	Structure Of The Human Anaplastic Lymphoma Kinase I		1e-04
2p2i_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		1e-04
2yfx_A	327	Structure Of L1196m Mutant Anaplastic Lymphoma Kina		1e-04
1rjb_A	344	Crystal Structure Of Flt3 Length = 344		1e-04
2xir_A	316	Crystal Structure Of The Vegfr2 Kinase Domain In Co		1e-04
3vnt_A	318	Crystal Structure Of The Kinase Domain Of Human Veg		1e-04
3d7t_A	269	Structural Basis For The Recognition Of C-Src By It		1e-04
4agc_A	353	Crystal Structure Of Vegfr2 (Juxtamembrane And Kina		1e-04
3cjg_A	309	Crystal Structure Of Vegfr2 In Complex With A 3,4,5		1e-04
1vr2_A	316	Human Vascular Endothelial Growth Factor Receptor 2		1e-04
2oh4_A	316	Crystal Structure Of Vegfr2 With A Benzimidazole-Ur		1e-04
3pjc_A	315	Crystal Structure Of Jak3 Complexed With A Potent A		1e-04
3fzo_A	277	Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosin		1e-04
4h1j_A	293	Crystal Structure Of Pyk2 With The Pyrazole 13a Len		1e-04
1ywn_A	316	Vegfr2 In Complex With A Novel 4-amino-furo[2,3-d]p		1e-04
3cc6_A	281	Crystal Structure Of Kinase Domain Of Protein Tyros		1e-04
2dyl_A	318	Crystal Structure Of Human Mitogen-Activated Protei		1e-04
3c7q_A	316	Structure Of Vegfr2 Kinase Domain In Complex With B		2e-04
4dym_A	301	Crystal Structure Of The Acvr1 Kinase Domain In Com		2e-04
3c4c_A	280	B-Raf Kinase In Complex With Plx4720 Length = 280		2e-04
3og7_A	289	B-Raf Kinase V600e Oncogenic Mutant In Complex With		2e-04
3hng_A	360	Crystal Structure Of Vegfr1 In Complex With N-(4-ch		2e-04
3mtf_A	301	Crystal Structure Of The Acvr1 Kinase In Complex Wi		2e-04
3lxn_A	318	Structural And Thermodynamic Characterization Of Th		2e-04
3l9p_A	367	Crystal Structure Of The Anaplastic Lymphoma Kinase		2e-04
3lct_A	344	Crystal Structure Of The Anaplastic Lymphoma Kinase		2e-04
4fk3_A	292	B-Raf Kinase V600e Oncogenic Mutant In Complex With		2e-04
3h9r_A	330	Crystal Structure Of The Kinase Domain Of Type I Ac		2e-04
3fe3_A	328	Crystal Structure Of The Kinase Mark3PAR-1: T211a-S		2e-04
1yvj_A	290	Crystal Structure Of The Jak3 Kinase Domain In Comp		2e-04
2rku_A	294	Structure Of Plk1 In Complex With Bi2536 Length = 2		2e-04
1zmw_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		2e-04
3kb7_A	311	Crystal Structure Of Polo-Like Kinase 1 In Complex		2e-04
2yac_A	311	Crystal Structure Of Polo-Like Kinase 1 In Complex		2e-04
3thb_A	333	Structure Of Plk1 Kinase Domain In Complex With A B		2e-04
2ou7_A	335	Structure Of The Catalytic Domain Of Human Polo-Lik		2e-04
2v5q_A	315	Crystal Structure Of Wild-type Plk-1 Kinase Domain		2e-04
2qnj_A	328	Kinase And Ubiquitin-Associated Domains Of Mark3PAR		2e-04
3nz0_A	302	Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 3		2e-04
2onl_C	406	Crystal Structure Of The P38a-Mapkap Kinase 2 Heter		2e-04
3nyx_A	302	Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-T		2e-04
2oza_A	356	Structure Of P38alpha Complex Length = 356		2e-04
1kwp_A	400	Crystal Structure Of Mapkap2 Length = 400		2e-04
2p3g_X	327	Crystal Structure Of A Pyrrolopyridine Inhibitor Bo		2e-04
3fpm_A	325	Crystal Structure Of A Squarate Inhibitor Bound To		2e-04
3r2y_A	319	Mk2 Kinase Bound To Compound 1 Length = 319		3e-04
2pzy_A	324	Structure Of Mk2 Complexed With Compound 76 Length		3e-04
2jbo_A	326	Protein Kinase Mk2 In Complex With An Inhibitor (Cr		3e-04
3r2b_A	318	Mk2 Kinase Bound To Compound 5b Length = 318		3e-04
3ka0_A	320	Mk2 Complex With Inhibitor 6-(5-(2-Aminopyrimidin-4		3e-04
3gok_A	334	Binding Site Mapping Of Protein Ligands Length = 33		3e-04
2zv2_A	298	Crystal Structure Of Human CalciumCALMODULIN-Depend		3e-04
2r0i_A	327	Crystal Structure Of A Kinase Mark2PAR-1 Mutant Len		3e-04
1zmu_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		3e-04
1zmv_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		3e-04
2wzj_A	327	Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82		3e-04
3iec_A	319	Helicobacter Pylori Caga Inhibits Par1MARK FAMILY K		3e-04
3hzt_A	467	Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme4		3e-04
3srv_A	277	Crystal Structure Of Spleen Tyrosine Kinase (Syk) I		4e-04
3s95_A	310	Crystal Structure Of The Human Limk1 Kinase Domain		4e-04
3srv_B	277	Crystal Structure Of Spleen Tyrosine Kinase (Syk) I		4e-04
4dfl_A	274	Crystal Structure Of Spleen Tyrosine Kinase Complex		4e-04
4f4p_A	273	Syk In Complex With Ligand Lasw836 Length = 273		4e-04
3emg_A	291	Discovery And Sar Of Novel 4-Thiazolyl-2- Phenylami		5e-04
1xba_A	291	Crystal Structure Of Apo Syk Tyrosine Kinase Domain		5e-04
4e20_A	290	Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda		5e-04
4e1z_A	291	Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda		5e-04
3tub_A	293	Crystal Structure Of Syk Kinase Domain With 1-(5-(6		5e-04
3vf8_A	299	Crystal Structure Of Spleen Tyrosine Kinase Syk Cat		5e-04
1f3m_C	297	Crystal Structure Of Human SerineTHREONINE KINASE P		5e-04
1yhv_A	297	Crystal Structure Of Pak1 Kinase Domain With Two Po		6e-04
4fif_A	346	Catalytic Domain Of Human Pak4 With Rpkplvdp Peptid		6e-04
4el9_A	305	Structure Of N-Terminal Kinase Domain Of Rsk2 With		6e-04
3my0_A	305	Crystal Structure Of The Acvrl1 (Alk1) Kinase Domai		6e-04
3ubd_A	304	Structure Of N-Terminal Domain Of Rsk2 Kinase In Co		6e-04
2i0e_A	353	Structure Of Catalytic Domain Of Human Protein Kina		6e-04
3pfq_A	674	Crystal Structure And Allosteric Activation Of Prot		7e-04
3g51_A	325	Structural Diversity Of The Active Conformation Of		7e-04
3bea_A	333	Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A P		7e-04
2i0v_A	335	C-Fms Tyrosine Kinase In Complex With A Quinolone I		7e-04
2ogv_A	317	Crystal Structure Of The Autoinhibited Human C-Fms		7e-04
3lcd_A	329	Inhibitor Bound To A Dfg-In Structure Of The Kinase		7e-04
2i1m_A	333	Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An		7e-04
2q0n_A	301	Structure Of Human P21 Activating Kinase 4 (Pak4) I		7e-04
2cdz_A	303	Crystal Structure Of The Human P21-Activated Kinase		7e-04
2bva_A	292	Crystal Structure Of The Human P21-Activated Kinase		7e-04
2x4z_A	296	Crystal Structure Of The Human P21-Activated Kinase		7e-04
1y8g_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		7e-04
4fl3_A	635	Structural And Biophysical Characterization Of The		8e-04
4fl2_A	636	Structural And Biophysical Characterization Of The		8e-04
3dxn_A	287	Crystal Structure Of The Calcium-dependent Kinase F		8e-04
4fie_A	423	Full-Length Human Pak4 Length = 423		8e-04
3q4z_A	306	Structure Of Unphosphorylated Pak1 Kinase Domain Le		8e-04

>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex (Mgatp) Length = 271

Iteration: 1
 Score =  202 bits (514), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 93/124 (75%), Positives = 108/124 (87%)
Query: 29  IDEDLTARINMADAQFSFQQRGRCYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWELA 88
           IDED+TARI+MAD +FSFQ  GR Y PAW++PEALQKKP D N  + DMWSFAVLLWEL 
Sbjct: 146 IDEDMTARISMADVKFSFQSPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELV 205
Query: 89  TREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPIL 148
           TREVPFADL+ ME+GMKVALEGLR TIPPGIS H+SKL++ICMNEDP KRP FDM++PIL
Sbjct: 206 TREVPFADLSNMEIGMKVALEGLRPTIPPGISPHVSKLMKICMNEDPAKRPKFDMIVPIL 265
Query: 149 DKMK 152
           +KM+
Sbjct: 266 EKMQ 269

>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex (Apo) Length = 271

Iteration: 1
 Score =  184 bits (468), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 86/124 (69%), Positives = 99/124 (79%)
Query: 29  IDEDLTARINMADAQFSFQQRGRCYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWELA 88
           IDED TARI+ AD +FSFQ  GR Y PAW++PEALQKKP D N  + D WSFAVLLWEL 
Sbjct: 146 IDEDXTARISXADVKFSFQSPGRXYAPAWVAPEALQKKPEDTNRRSADXWSFAVLLWELV 205
Query: 89  TREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPIL 148
           TREVPFADL+  E+G KVALEGLR TIPPGIS H+SKL +IC NEDP KRP FD ++PIL
Sbjct: 206 TREVPFADLSNXEIGXKVALEGLRPTIPPGISPHVSKLXKICXNEDPAKRPKFDXIVPIL 265
Query: 149 DKMK 152
           +K +
Sbjct: 266 EKXQ 269

>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In Complex With Staurosporine Length = 309

Iteration: 1
 Score = 74.3 bits (181), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 34/94 (36%), Positives = 57/94 (60%), Gaps = 3/94 (3%)
Query: 55  PAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRIT 114
           P WM+PE L+ +P +   E  D++SF V+LWELAT + P+ +L P +V   V  +  R+ 
Sbjct: 203 PEWMAPEVLRDEPSN---EKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRLE 259
Query: 115 IPPGISSHLSKLIRICMNEDPGKRPTFDMVLPIL 148
           IP  ++  ++ +I  C   +P KRP+F  ++ +L
Sbjct: 260 IPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLL 293

>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With Staurosporine Length = 309

Iteration: 1
 Score = 73.9 bits (180), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 34/94 (36%), Positives = 57/94 (60%), Gaps = 3/94 (3%)
Query: 55  PAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRIT 114
           P WM+PE L+ +P +   E  D++SF V+LWELAT + P+ +L P +V   V  +  R+ 
Sbjct: 203 PEWMAPEVLRDEPSN---EKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRLE 259
Query: 115 IPPGISSHLSKLIRICMNEDPGKRPTFDMVLPIL 148
           IP  ++  ++ +I  C   +P KRP+F  ++ +L
Sbjct: 260 IPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLL 293

>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed With Compound 16 Length = 271

Iteration: 1
 Score = 68.2 bits (165), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 35/90 (38%), Positives = 49/90 (54%), Gaps = 3/90 (3%)
Query: 56  AWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITI 115
           AWM+PE ++     +     D+WS+ VLLWEL T EVPF  +  + V   VA+  L + I
Sbjct: 179 AWMAPEVIRASMFSK---GSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKLALPI 235
Query: 116 PPGISSHLSKLIRICMNEDPGKRPTFDMVL 145
           P       +KL+  C N DP  RP+F  +L
Sbjct: 236 PSTCPEPFAKLMEDCWNPDPHSRPSFTNIL 265

>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:s768a Triple Mutant Length = 373

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 38/130 (29%), Positives = 69/130 (53%), Gaps = 5/130 (3%)
Query: 25  FCCQIDEDLTARINMADAQFSFQQRGRCYYPAWMSPEALQKKPGDRNLEACDMWSFAVLL 84
             C++ +   AR+   D + ++  RG      W SPEA+  +   +   A D+WS+ ++L
Sbjct: 184 LVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR---KFTSASDVWSYGIVL 240
Query: 85  WE-LATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDM 143
           WE ++  E P+ +++  +V +K   EG R+  P    + L +L+  C  +D   RP F+ 
Sbjct: 241 WEVMSYGERPYWEMSNQDV-IKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQ 299
Query: 144 VLPILDKMKR 153
           ++ ILDK+ R
Sbjct: 300 IVSILDKLIR 309

>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor Length = 307

Iteration: 1
 Score = 63.2 bits (152), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 42/147 (28%), Positives = 75/147 (51%), Gaps = 14/147 (9%)
Query: 11  YLNSKKSKTSNAFLFCCQIDEDLTARI-------NMADAQFSFQQRGRCYYPA-WMSPEA 62
           YLN+KK    N     C +  D T +I       ++ +  + +++ G+   P  WM+PE+
Sbjct: 146 YLNAKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDY-YRKGGKGLLPVRWMAPES 204
Query: 63  LQKKPGDRNLEACDMWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISS 121
           L+         + DMWSF V+LWE+ +  E P+  L+  +V +K  ++G  +  P     
Sbjct: 205 LKDGV---FTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQV-LKFVMDGGYLDQPDNCPE 260
Query: 122 HLSKLIRICMNEDPGKRPTFDMVLPIL 148
            ++ L+R+C   +P  RPTF  ++ +L
Sbjct: 261 RVTDLMRMCWQFNPNMRPTFLEIVNLL 287

>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 373

Iteration: 1
 Score = 63.2 bits (152), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 37/130 (28%), Positives = 69/130 (53%), Gaps = 5/130 (3%)
Query: 25  FCCQIDEDLTARINMADAQFSFQQRGRCYYPAWMSPEALQKKPGDRNLEACDMWSFAVLL 84
             C++ +   +R+   D + ++  RG      W SPEA+  +   +   A D+WS+ ++L
Sbjct: 184 LVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR---KFTSASDVWSYGIVL 240
Query: 85  WE-LATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDM 143
           WE ++  E P+ +++  +V +K   EG R+  P    + L +L+  C  +D   RP F+ 
Sbjct: 241 WEVMSYGERPYWEMSNQDV-IKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQ 299
Query: 144 VLPILDKMKR 153
           ++ ILDK+ R
Sbjct: 300 IVSILDKLIR 309

>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant Length = 373

Iteration: 1
 Score = 63.2 bits (152), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 37/130 (28%), Positives = 69/130 (53%), Gaps = 5/130 (3%)
Query: 25  FCCQIDEDLTARINMADAQFSFQQRGRCYYPAWMSPEALQKKPGDRNLEACDMWSFAVLL 84
             C++ +   +R+   D + ++  RG      W SPEA+  +   +   A D+WS+ ++L
Sbjct: 184 LVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR---KFTSASDVWSYGIVL 240
Query: 85  WE-LATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDM 143
           WE ++  E P+ +++  +V +K   EG R+  P    + L +L+  C  +D   RP F+ 
Sbjct: 241 WEVMSYGERPYWEMSNQDV-IKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQ 299
Query: 144 VLPILDKMKR 153
           ++ ILDK+ R
Sbjct: 300 IVSILDKLIR 309

>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant Length = 373

Iteration: 1
 Score = 63.2 bits (152), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 37/130 (28%), Positives = 69/130 (53%), Gaps = 5/130 (3%)
Query: 25  FCCQIDEDLTARINMADAQFSFQQRGRCYYPAWMSPEALQKKPGDRNLEACDMWSFAVLL 84
             C++ +   +R+   D + ++  RG      W SPEA+  +   +   A D+WS+ ++L
Sbjct: 184 LVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR---KFTSASDVWSYGIVL 240
Query: 85  WE-LATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDM 143
           WE ++  E P+ +++  +V +K   EG R+  P    + L +L+  C  +D   RP F+ 
Sbjct: 241 WEVMSYGERPYWEMSNQDV-IKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQ 299
Query: 144 VLPILDKMKR 153
           ++ ILDK+ R
Sbjct: 300 IVSILDKLIR 309

>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The Insulin Receptor Tyrosine Kinase Length = 306

Iteration: 1
 Score = 63.2 bits (152), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 42/147 (28%), Positives = 75/147 (51%), Gaps = 14/147 (9%)
Query: 11  YLNSKKSKTSNAFLFCCQIDEDLTARI-------NMADAQFSFQQRGRCYYPA-WMSPEA 62
           YLN+KK    N     C +  D T +I       ++ +  + +++ G+   P  WM+PE+
Sbjct: 145 YLNAKKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDY-YRKGGKGLLPVRWMAPES 203
Query: 63  LQKKPGDRNLEACDMWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISS 121
           L+         + DMWSF V+LWE+ +  E P+  L+  +V +K  ++G  +  P     
Sbjct: 204 LKDGV---FTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQV-LKFVMDGGYLDQPDNCPE 259
Query: 122 HLSKLIRICMNEDPGKRPTFDMVLPIL 148
            ++ L+R+C   +P  RPTF  ++ +L
Sbjct: 260 RVTDLMRMCWQFNPNMRPTFLEIVNLL 286

>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To Substrate Kqwdnye[ptyr]iw Length = 371

Iteration: 1
 Score = 63.2 bits (152), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 37/130 (28%), Positives = 69/130 (53%), Gaps = 5/130 (3%)
Query: 25  FCCQIDEDLTARINMADAQFSFQQRGRCYYPAWMSPEALQKKPGDRNLEACDMWSFAVLL 84
             C++ +   +R+   D + ++  RG      W SPEA+  +   +   A D+WS+ ++L
Sbjct: 182 LVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR---KFTSASDVWSYGIVL 238
Query: 85  WE-LATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDM 143
           WE ++  E P+ +++  +V +K   EG R+  P    + L +L+  C  +D   RP F+ 
Sbjct: 239 WEVMSYGERPYWEMSNQDV-IKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQ 297
Query: 144 VLPILDKMKR 153
           ++ ILDK+ R
Sbjct: 298 IVSILDKLIR 307

>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Dephosphorylated, Amp-Pnp Bound Length = 373

Iteration: 1
 Score = 63.2 bits (152), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 37/130 (28%), Positives = 69/130 (53%), Gaps = 5/130 (3%)
Query: 25  FCCQIDEDLTARINMADAQFSFQQRGRCYYPAWMSPEALQKKPGDRNLEACDMWSFAVLL 84
             C++ +   +R+   D + ++  RG      W SPEA+  +   +   A D+WS+ ++L
Sbjct: 184 LVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR---KFTSASDVWSYGIVL 240
Query: 85  WE-LATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDM 143
           WE ++  E P+ +++  +V +K   EG R+  P    + L +L+  C  +D   RP F+ 
Sbjct: 241 WEVMSYGERPYWEMSNQDV-IKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQ 299
Query: 144 VLPILDKMKR 153
           ++ ILDK+ R
Sbjct: 300 IVSILDKLIR 309

>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor Awl-Ii- 38.3 Length = 361

Iteration: 1
 Score = 63.2 bits (152), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 37/130 (28%), Positives = 69/130 (53%), Gaps = 5/130 (3%)
Query: 25  FCCQIDEDLTARINMADAQFSFQQRGRCYYPAWMSPEALQKKPGDRNLEACDMWSFAVLL 84
             C++ +   +R+   D + ++  RG      W SPEA+  +   +   A D+WS+ ++L
Sbjct: 172 LVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR---KFTSASDVWSYGIVL 228
Query: 85  WE-LATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDM 143
           WE ++  E P+ +++  +V +K   EG R+  P    + L +L+  C  +D   RP F+ 
Sbjct: 229 WEVMSYGERPYWEMSNQDV-IKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQ 287
Query: 144 VLPILDKMKR 153
           ++ ILDK+ R
Sbjct: 288 IVSILDKLIR 297

>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f Double Mutant Length = 373

Iteration: 1
 Score = 63.2 bits (152), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 37/130 (28%), Positives = 69/130 (53%), Gaps = 5/130 (3%)
Query: 25  FCCQIDEDLTARINMADAQFSFQQRGRCYYPAWMSPEALQKKPGDRNLEACDMWSFAVLL 84
             C++ +   +R+   D + ++  RG      W SPEA+  +   +   A D+WS+ ++L
Sbjct: 184 LVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR---KFTSASDVWSYGIVL 240
Query: 85  WE-LATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDM 143
           WE ++  E P+ +++  +V +K   EG R+  P    + L +L+  C  +D   RP F+ 
Sbjct: 241 WEVMSYGERPYWEMSNQDV-IKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQ 299
Query: 144 VLPILDKMKR 153
           ++ ILDK+ R
Sbjct: 300 IVSILDKLIR 309

>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound Structure Length = 344

Iteration: 1
 Score = 63.2 bits (152), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 37/130 (28%), Positives = 69/130 (53%), Gaps = 5/130 (3%)
Query: 25  FCCQIDEDLTARINMADAQFSFQQRGRCYYPAWMSPEALQKKPGDRNLEACDMWSFAVLL 84
             C++ +   +R+   D + ++  RG      W SPEA+  +   +   A D+WS+ ++L
Sbjct: 155 LVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR---KFTSASDVWSYGIVL 211
Query: 85  WE-LATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDM 143
           WE ++  E P+ +++  +V +K   EG R+  P    + L +L+  C  +D   RP F+ 
Sbjct: 212 WEVMSYGERPYWEMSNQDV-IKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQ 270
Query: 144 VLPILDKMKR 153
           ++ ILDK+ R
Sbjct: 271 IVSILDKLIR 280

>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure Length = 344

Iteration: 1
 Score = 63.2 bits (152), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 37/130 (28%), Positives = 69/130 (53%), Gaps = 5/130 (3%)
Query: 25  FCCQIDEDLTARINMADAQFSFQQRGRCYYPAWMSPEALQKKPGDRNLEACDMWSFAVLL 84
             C++ +   +R+   D + ++  RG      W SPEA+  +   +   A D+WS+ ++L
Sbjct: 155 LVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR---KFTSASDVWSYGIVL 211
Query: 85  WE-LATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDM 143
           WE ++  E P+ +++  +V +K   EG R+  P    + L +L+  C  +D   RP F+ 
Sbjct: 212 WEVMSYGERPYWEMSNQDV-IKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQ 270
Query: 144 VLPILDKMKR 153
           ++ ILDK+ R
Sbjct: 271 IVSILDKLIR 280

>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596:y602:s768g Triple Mutant Length = 373

Iteration: 1
 Score = 63.2 bits (152), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 37/130 (28%), Positives = 68/130 (52%), Gaps = 5/130 (3%)
Query: 25  FCCQIDEDLTARINMADAQFSFQQRGRCYYPAWMSPEALQKKPGDRNLEACDMWSFAVLL 84
             C++ +    R+   D + ++  RG      W SPEA+  +   +   A D+WS+ ++L
Sbjct: 184 LVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR---KFTSASDVWSYGIVL 240
Query: 85  WE-LATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDM 143
           WE ++  E P+ +++  +V +K   EG R+  P    + L +L+  C  +D   RP F+ 
Sbjct: 241 WEVMSYGERPYWEMSNQDV-IKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQ 299
Query: 144 VLPILDKMKR 153
           ++ ILDK+ R
Sbjct: 300 IVSILDKLIR 309

>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742f Triple Mutant Length = 373

Iteration: 1
 Score = 63.2 bits (152), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 37/130 (28%), Positives = 69/130 (53%), Gaps = 5/130 (3%)
Query: 25  FCCQIDEDLTARINMADAQFSFQQRGRCYYPAWMSPEALQKKPGDRNLEACDMWSFAVLL 84
             C++ +   +R+   D + ++  RG      W SPEA+  +   +   A D+WS+ ++L
Sbjct: 184 LVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR---KFTSASDVWSYGIVL 240
Query: 85  WE-LATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDM 143
           WE ++  E P+ +++  +V +K   EG R+  P    + L +L+  C  +D   RP F+ 
Sbjct: 241 WEVMSYGERPYWEMSNQDV-IKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQ 299
Query: 144 VLPILDKMKR 153
           ++ ILDK+ R
Sbjct: 300 IVSILDKLIR 309

>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742a Triple Mutant Length = 373

Iteration: 1
 Score = 63.2 bits (152), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 37/130 (28%), Positives = 69/130 (53%), Gaps = 5/130 (3%)
Query: 25  FCCQIDEDLTARINMADAQFSFQQRGRCYYPAWMSPEALQKKPGDRNLEACDMWSFAVLL 84
             C++ +   +R+   D + ++  RG      W SPEA+  +   +   A D+WS+ ++L
Sbjct: 184 LVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR---KFTSASDVWSYGIVL 240
Query: 85  WE-LATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDM 143
           WE ++  E P+ +++  +V +K   EG R+  P    + L +L+  C  +D   RP F+ 
Sbjct: 241 WEVMSYGERPYWEMSNQDV-IKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQ 299
Query: 144 VLPILDKMKR 153
           ++ ILDK+ R
Sbjct: 300 IVSILDKLIR 309

>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein Kinase Length = 333

Iteration: 1
 Score = 63.2 bits (152), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 37/130 (28%), Positives = 68/130 (52%), Gaps = 5/130 (3%)
Query: 25  FCCQIDEDLTARINMADAQFSFQQRGRCYYPAWMSPEALQKKPGDRNLEACDMWSFAVLL 84
             C++ +   +R+   D + ++   G      W +PEA+  +   +   A D+WSF +++
Sbjct: 184 LVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYR---KFTSASDVWSFGIVM 240
Query: 85  WELATR-EVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDM 143
           WE+ T  E P+ +L+  EV MK   +G R+  P    S + +L+  C  ++  +RP F  
Sbjct: 241 WEVMTYGERPYWELSNHEV-MKAINDGFRLPTPMDCPSAIYQLMMQCWQQERARRPKFAD 299
Query: 144 VLPILDKMKR 153
           ++ ILDK+ R
Sbjct: 300 IVSILDKLIR 309

>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7) Length = 318

Iteration: 1
 Score = 62.8 bits (151), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 36/130 (27%), Positives = 69/130 (53%), Gaps = 5/130 (3%)
Query: 25  FCCQIDEDLTARINMADAQFSFQQRGRCYYPAWMSPEALQKKPGDRNLEACDMWSFAVLL 84
             C++ +   +R+   D +  +   G      W +PEA+Q +   +   A D+WS+ +++
Sbjct: 182 LVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEAIQYR---KFTSASDVWSYGIVM 238
Query: 85  WE-LATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDM 143
           WE ++  E P+ D++  +V +K   EG R+  P    + L +L+  C  ++  +RP F+ 
Sbjct: 239 WEVMSYGERPYWDMSNQDV-IKAIEEGYRLPAPMDCPAGLHQLMLDCWQKERAERPKFEQ 297
Query: 144 VLPILDKMKR 153
           ++ ILDKM R
Sbjct: 298 IVGILDKMIR 307

>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo Pyridine Inhibitor Length = 317

Iteration: 1
 Score = 60.8 bits (146), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 41/147 (27%), Positives = 75/147 (51%), Gaps = 14/147 (9%)
Query: 11  YLNSKKSKTSNAFLFCCQIDEDLTARI-------NMADAQFSFQQRGRCYYPA-WMSPEA 62
           YLN+KK    +     C +  D T +I       ++ +  + +++ G+   P  WM+PE+
Sbjct: 144 YLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDY-YRKGGKGLLPVRWMAPES 202
Query: 63  LQKKPGDRNLEACDMWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISS 121
           L+         + DMWSF V+LWE+ +  E P+  L+  +V +K  ++G  +  P     
Sbjct: 203 LKDGV---FTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQV-LKFVMDGGYLDQPDNCPE 258
Query: 122 HLSKLIRICMNEDPGKRPTFDMVLPIL 148
            ++ L+R+C   +P  RPTF  ++ +L
Sbjct: 259 RVTDLMRMCWQFNPKMRPTFLEIVNLL 285

>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase Domain (2p) In Complex With A Bis-Azaindole Inhibitor Length = 336

Iteration: 1
 Score = 60.8 bits (146), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 44/152 (28%), Positives = 79/152 (51%), Gaps = 15/152 (9%)
Query: 11  YLNSKKSKTSNAFLFCCQIDEDLTARI-------NMADAQFSFQQRGRCYYPA-WMSPEA 62
           YLN+ K    +     C + ED T +I       ++ +  + +++ G+   P  WMSPE+
Sbjct: 175 YLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDY-YRKGGKGLLPVRWMSPES 233
Query: 63  LQKKPGDRNLEACDMWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISS 121
           L+           D+WSF V+LWE+AT  E P+  L+  +V ++  +EG  +  P     
Sbjct: 234 LKDGVFTT---YSDVWSFGVVLWEIATLAEQPYQGLSNEQV-LRFVMEGGLLDKPDNCPD 289
Query: 122 HLSKLIRICMNEDPGKRPTF-DMVLPILDKMK 152
            L +L+R+C   +P  RP+F +++  I ++M+
Sbjct: 290 MLFELMRMCWQYNPKMRPSFLEIISSIKEEME 321

>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Human Insulin Receptor Length = 306

Iteration: 1
 Score = 60.8 bits (146), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 41/147 (27%), Positives = 75/147 (51%), Gaps = 14/147 (9%)
Query: 11  YLNSKKSKTSNAFLFCCQIDEDLTARI-------NMADAQFSFQQRGRCYYPA-WMSPEA 62
           YLN+KK    +     C +  D T +I       ++ +  + +++ G+   P  WM+PE+
Sbjct: 145 YLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDY-YRKGGKGLLPVRWMAPES 203
Query: 63  LQKKPGDRNLEACDMWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISS 121
           L+         + DMWSF V+LWE+ +  E P+  L+  +V +K  ++G  +  P     
Sbjct: 204 LKDGV---FTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQV-LKFVMDGGYLDQPDNCPE 259
Query: 122 HLSKLIRICMNEDPGKRPTFDMVLPIL 148
            ++ L+R+C   +P  RPTF  ++ +L
Sbjct: 260 RVTDLMRMCWQFNPKMRPTFLEIVNLL 286

>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain Length = 308

Iteration: 1
 Score = 60.8 bits (146), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 44/152 (28%), Positives = 79/152 (51%), Gaps = 15/152 (9%)
Query: 11  YLNSKKSKTSNAFLFCCQIDEDLTARI-------NMADAQFSFQQRGRCYYPA-WMSPEA 62
           YLN+ K    +     C + ED T +I       ++ +  + +++ G+   P  WMSPE+
Sbjct: 147 YLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDY-YRKGGKGLLPVRWMSPES 205
Query: 63  LQKKPGDRNLEACDMWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISS 121
           L+           D+WSF V+LWE+AT  E P+  L+  +V ++  +EG  +  P     
Sbjct: 206 LKDGV---FTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQV-LRFVMEGGLLDKPDNCPD 261
Query: 122 HLSKLIRICMNEDPGKRPTF-DMVLPILDKMK 152
            L +L+R+C   +P  RP+F +++  I ++M+
Sbjct: 262 MLFELMRMCWQYNPKMRPSFLEIISSIKEEME 293

>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1 Length = 304

Iteration: 1
 Score = 60.8 bits (146), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 44/152 (28%), Positives = 79/152 (51%), Gaps = 15/152 (9%)
Query: 11  YLNSKKSKTSNAFLFCCQIDEDLTARI-------NMADAQFSFQQRGRCYYPA-WMSPEA 62
           YLN+ K    +     C + ED T +I       ++ +  + +++ G+   P  WMSPE+
Sbjct: 143 YLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDY-YRKGGKGLLPVRWMSPES 201
Query: 63  LQKKPGDRNLEACDMWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISS 121
           L+           D+WSF V+LWE+AT  E P+  L+  +V ++  +EG  +  P     
Sbjct: 202 LKDGV---FTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQV-LRFVMEGGLLDKPDNCPD 257
Query: 122 HLSKLIRICMNEDPGKRPTF-DMVLPILDKMK 152
            L +L+R+C   +P  RP+F +++  I ++M+
Sbjct: 258 MLFELMRMCWQYNPKMRPSFLEIISSIKEEME 289

>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex With An Hydantoin Inhibitor Length = 305

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 44/152 (28%), Positives = 79/152 (51%), Gaps = 15/152 (9%)
Query: 11  YLNSKKSKTSNAFLFCCQIDEDLTARI-------NMADAQFSFQQRGRCYYPA-WMSPEA 62
           YLN+ K    +     C + ED T +I       ++ +  + +++ G+   P  WMSPE+
Sbjct: 144 YLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDY-YRKGGKGLLPVRWMSPES 202
Query: 63  LQKKPGDRNLEACDMWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISS 121
           L+           D+WSF V+LWE+AT  E P+  L+  +V ++  +EG  +  P     
Sbjct: 203 LKDGV---FTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQV-LRFVMEGGLLDKPDNCPD 258
Query: 122 HLSKLIRICMNEDPGKRPTF-DMVLPILDKMK 152
            L +L+R+C   +P  RP+F +++  I ++M+
Sbjct: 259 MLFELMRMCWQYNPKMRPSFLEIISSIKEEME 290

>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1 Receptor Kinase In Complex With Pqip Length = 301

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 44/152 (28%), Positives = 79/152 (51%), Gaps = 15/152 (9%)
Query: 11  YLNSKKSKTSNAFLFCCQIDEDLTARI-------NMADAQFSFQQRGRCYYPA-WMSPEA 62
           YLN+ K    +     C + ED T +I       ++ +  + +++ G+   P  WMSPE+
Sbjct: 140 YLNANKFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDY-YRKGGKGLLPVRWMSPES 198
Query: 63  LQKKPGDRNLEACDMWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISS 121
           L+           D+WSF V+LWE+AT  E P+  L+  +V ++  +EG  +  P     
Sbjct: 199 LKDGV---FTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQV-LRFVMEGGLLDKPDNCPD 254
Query: 122 HLSKLIRICMNEDPGKRPTF-DMVLPILDKMK 152
            L +L+R+C   +P  RP+F +++  I ++M+
Sbjct: 255 MLLELMRMCWQYNPKMRPSFLEIISSIKEEME 286

>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A Benzimidazole Inhibitor Length = 307

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 45/151 (29%), Positives = 76/151 (50%), Gaps = 17/151 (11%)
Query: 11  YLNSKKSKTSNAFLFCCQIDEDLTARI-------NMADAQFSFQQRGRCYYPA-WMSPEA 62
           YLN+ K    +     C + ED T +I       ++ +  + +++ G+   P  WMSPE+
Sbjct: 146 YLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDY-YRKGGKGLLPVRWMSPES 204
Query: 63  LQKKPGDRNLEACDMWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISS 121
           L+           D+WSF V+LWE+AT  E P+  L+  +V ++  +EG  +  P     
Sbjct: 205 LKDGV---FTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQV-LRFVMEGGLLDKPDNCPD 260
Query: 122 HLSKLIRICMNEDPGKRPTFDMVLPILDKMK 152
            L +L+R+C   +P  RP+F   L I+  +K
Sbjct: 261 MLFELMRMCWQYNPKMRPSF---LEIISSIK 288

>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With Pyrimidine 8 Length = 301

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 44/152 (28%), Positives = 79/152 (51%), Gaps = 15/152 (9%)
Query: 11  YLNSKKSKTSNAFLFCCQIDEDLTARI-------NMADAQFSFQQRGRCYYPA-WMSPEA 62
           YLN+ K    +     C + ED T +I       ++ +  + +++ G+   P  WMSPE+
Sbjct: 140 YLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDY-YRKGGKGLLPVRWMSPES 198
Query: 63  LQKKPGDRNLEACDMWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISS 121
           L+           D+WSF V+LWE+AT  E P+  L+  +V ++  +EG  +  P     
Sbjct: 199 LKDGV---FTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQV-LRFVMEGGLLDKPDNCPD 254
Query: 122 HLSKLIRICMNEDPGKRPTF-DMVLPILDKMK 152
            L +L+R+C   +P  RP+F +++  I ++M+
Sbjct: 255 MLFELMRMCWQYNPKMRPSFLEIISSIKEEME 286

>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor (Igf-1r-Wt) Complex With Bms-754807 [1-(4-((5-Cyclopropyl- 1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2, 4]triazin-2-Yl)-N- (6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide] Length = 315

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 45/151 (29%), Positives = 76/151 (50%), Gaps = 17/151 (11%)
Query: 11  YLNSKKSKTSNAFLFCCQIDEDLTARI-------NMADAQFSFQQRGRCYYPA-WMSPEA 62
           YLN+ K    +     C + ED T +I       ++ +  + +++ G+   P  WMSPE+
Sbjct: 146 YLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDY-YRKGGKGLLPVRWMSPES 204
Query: 63  LQKKPGDRNLEACDMWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISS 121
           L+           D+WSF V+LWE+AT  E P+  L+  +V ++  +EG  +  P     
Sbjct: 205 LKDGVFTT---YSDVWSFGVVLWEIATLAEQPYQGLSNEQV-LRFVMEGGLLDKPDNCPD 260
Query: 122 HLSKLIRICMNEDPGKRPTFDMVLPILDKMK 152
            L +L+R+C   +P  RP+F   L I+  +K
Sbjct: 261 MLFELMRMCWQYNPKMRPSF---LEIISSIK 288

>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of The Insulin Receptor Tyrosine Kinase Length = 306

Iteration: 1
 Score = 60.5 bits (145), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 41/147 (27%), Positives = 75/147 (51%), Gaps = 14/147 (9%)
Query: 11  YLNSKKSKTSNAFLFCCQIDEDLTARI-------NMADAQFSFQQRGRCYYPA-WMSPEA 62
           YLN+KK    +     C +  D T +I       ++ +  + +++ G+   P  WM+PE+
Sbjct: 145 YLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAY-YRKGGKGLLPVRWMAPES 203
Query: 63  LQKKPGDRNLEACDMWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISS 121
           L+         + DMWSF V+LWE+ +  E P+  L+  +V +K  ++G  +  P     
Sbjct: 204 LKD---GVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQV-LKFVMDGGYLDQPDNCPE 259
Query: 122 HLSKLIRICMNEDPGKRPTFDMVLPIL 148
            ++ L+R+C   +P  RPTF  ++ +L
Sbjct: 260 RVTDLMRMCWQFNPKMRPTFLEIVNLL 286

>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5) Length = 295

Iteration: 1
 Score = 60.5 bits (145), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 69/130 (53%), Gaps = 5/130 (3%)
Query: 25  FCCQIDEDLTARINMADAQFSFQQRGRCYYPAWMSPEALQKKPGDRNLEACDMWSFAVLL 84
             C++ +   +R+   D + ++  RG      W +PEA+  +   +   A D+WS+ +++
Sbjct: 161 LVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAFR---KFTSASDVWSYGIVM 217
Query: 85  WELATR-EVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDM 143
           WE+ +  E P+ ++T  +V +K   EG R+  P    + L +L+  C  ++   RP FD 
Sbjct: 218 WEVVSYGERPYWEMTNQDV-IKAVEEGYRLPSPMDCPAALYQLMLDCWQKERNSRPKFDE 276
Query: 144 VLPILDKMKR 153
           ++ +LDK+ R
Sbjct: 277 IVNMLDKLIR 286

>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth Factor-1 Receptor Kinase Domain Length = 322

Iteration: 1
 Score = 60.5 bits (145), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 44/152 (28%), Positives = 79/152 (51%), Gaps = 15/152 (9%)
Query: 11  YLNSKKSKTSNAFLFCCQIDEDLTARI-------NMADAQFSFQQRGRCYYPA-WMSPEA 62
           YLN+ K    +     C + ED T +I       ++ +  + +++ G+   P  WMSPE+
Sbjct: 153 YLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDY-YRKGGKGLLPVRWMSPES 211
Query: 63  LQKKPGDRNLEACDMWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISS 121
           L+           D+WSF V+LWE+AT  E P+  L+  +V ++  +EG  +  P     
Sbjct: 212 LKDGVFTT---YSDVWSFGVVLWEIATLAEQPYQGLSNEQV-LRFVMEGGLLDKPDNCPD 267
Query: 122 HLSKLIRICMNEDPGKRPTF-DMVLPILDKMK 152
            L +L+R+C   +P  RP+F +++  I ++M+
Sbjct: 268 MLFELMRMCWQYNPKMRPSFLEIISSIKEEME 299

>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a Resolution. Length = 322

Iteration: 1
 Score = 60.5 bits (145), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 44/152 (28%), Positives = 79/152 (51%), Gaps = 15/152 (9%)
Query: 11  YLNSKKSKTSNAFLFCCQIDEDLTARI-------NMADAQFSFQQRGRCYYPA-WMSPEA 62
           YLN+ K    +     C + ED T +I       ++ +  + +++ G+   P  WMSPE+
Sbjct: 153 YLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDY-YRKGGKGLLPVRWMSPES 211
Query: 63  LQKKPGDRNLEACDMWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISS 121
           L+           D+WSF V+LWE+AT  E P+  L+  +V ++  +EG  +  P     
Sbjct: 212 LKD---GVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQV-LRFVMEGGLLDKPDNCPD 267
Query: 122 HLSKLIRICMNEDPGKRPTF-DMVLPILDKMK 152
            L +L+R+C   +P  RP+F +++  I ++M+
Sbjct: 268 MLFELMRMCWQYNPKMRPSFLEIISSIKEEME 299

>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325

Iteration: 1
 Score = 60.1 bits (144), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 38/130 (29%), Positives = 65/130 (50%), Gaps = 5/130 (3%)
Query: 25  FCCQIDEDLTARINMADAQFSFQQRGRCYYPAWMSPEALQKKPGDRNLEACDMWSFAVLL 84
             C++ +   +R+   D   ++   G      W +PEA+  +       A D+WSF V++
Sbjct: 188 LVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFS---SASDVWSFGVVM 244
Query: 85  WE-LATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDM 143
           WE LA  E P+ ++T  +V   V  EG R+  P G    L +L+  C ++D  +RP F  
Sbjct: 245 WEVLAYGERPYWNMTNRDVISSVE-EGYRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQ 303
Query: 144 VLPILDKMKR 153
           ++ +LD + R
Sbjct: 304 IVSVLDALIR 313

>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In Complex With The Sh2 Domain Of Aps Length = 306

Iteration: 1
 Score = 59.3 bits (142), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 43/146 (29%), Positives = 71/146 (48%), Gaps = 12/146 (8%)
Query: 11  YLNSKKSKTSNAFLFCCQIDEDLTARIN----MADAQFSFQQR--GRCYYPA-WMSPEAL 63
           YLN+KK    +     C +  D T +I       D   +   R  G+   P  WM+PE+L
Sbjct: 145 YLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAPESL 204
Query: 64  QKKPGDRNLEACDMWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISSH 122
           +         + DMWSF V+LWE+ +  E P+  L+  +V +K  ++G  +  P      
Sbjct: 205 KDGV---FTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQV-LKFVMDGGYLDQPDNCPER 260
Query: 123 LSKLIRICMNEDPGKRPTFDMVLPIL 148
           ++ L+R+C   +P  RPTF  ++ +L
Sbjct: 261 VTDLMRMCWQFNPNMRPTFLEIVNLL 286

>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp Length = 298

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 43/151 (28%), Positives = 73/151 (48%), Gaps = 14/151 (9%)
Query: 11  YLNSKKSKTSNAFLFCCQIDEDLTARI-------NMADAQF-SFQQRGRCYYPA-WMSPE 61
           YL  +K    +     C +DE  T ++       ++ D ++ S QQ      P  W + E
Sbjct: 139 YLAEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALE 198
Query: 62  ALQKKPGDRNLEACDMWSFAVLLWELATREV-PFADLTPMEVGMKVALEGLRITIPPGIS 120
           +LQ     R     D+WSF VLLWEL TR   P+  + P ++   +A +G R+  P    
Sbjct: 199 SLQTY---RFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLA-QGRRLPQPEYCP 254
Query: 121 SHLSKLIRICMNEDPGKRPTFDMVLPILDKM 151
             L ++++ C   DP  RPTF +++  ++++
Sbjct: 255 DSLYQVMQQCWEADPAVRPTFRVLVGEVEQI 285

>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2- Yl]amino}phenyl)acetic Acid Length = 303

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 43/146 (29%), Positives = 71/146 (48%), Gaps = 12/146 (8%)
Query: 11  YLNSKKSKTSNAFLFCCQIDEDLTARIN----MADAQFSFQQR--GRCYYPA-WMSPEAL 63
           YLN+KK    +     C +  D T +I       D   +   R  G+   P  WM+PE+L
Sbjct: 142 YLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAPESL 201
Query: 64  QKKPGDRNLEACDMWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISSH 122
           +         + DMWSF V+LWE+ +  E P+  L+  +V +K  ++G  +  P      
Sbjct: 202 KDGV---FTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQV-LKFVMDGGYLDQPDNCPER 257
Query: 123 LSKLIRICMNEDPGKRPTFDMVLPIL 148
           ++ L+R+C   +P  RPTF  ++ +L
Sbjct: 258 VTDLMRMCWQFNPKMRPTFLEIVNLL 283

>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex With Peptide Substrate And Atp Analog Length = 306

Iteration: 1
 Score = 58.5 bits (140), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 43/146 (29%), Positives = 71/146 (48%), Gaps = 12/146 (8%)
Query: 11  YLNSKKSKTSNAFLFCCQIDEDLTARIN----MADAQFSFQQR--GRCYYPA-WMSPEAL 63
           YLN+KK    +     C +  D T +I       D   +   R  G+   P  WM+PE+L
Sbjct: 145 YLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAPESL 204
Query: 64  QKKPGDRNLEACDMWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISSH 122
           +         + DMWSF V+LWE+ +  E P+  L+  +V +K  ++G  +  P      
Sbjct: 205 KDGV---FTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQV-LKFVMDGGYLDQPDNCPER 260
Query: 123 LSKLIRICMNEDPGKRPTFDMVLPIL 148
           ++ L+R+C   +P  RPTF  ++ +L
Sbjct: 261 VTDLMRMCWQFNPKMRPTFLEIVNLL 286

>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor And Isoquinolinedione Inhibitor Length = 308

Iteration: 1
 Score = 58.2 bits (139), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 46/151 (30%), Positives = 75/151 (49%), Gaps = 13/151 (8%)
Query: 11  YLNSKKSKTSNAFLFCCQIDEDLTARIN----MADAQFSFQQR--GRCYYPA-WMSPEAL 63
           YLN+ K    +     C + ED T +I       D   +   R  G+   P  WMSPE+L
Sbjct: 147 YLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMSPESL 206
Query: 64  QKKPGDRNLEACDMWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISSH 122
           +           D+WSF V+LWE+AT  E P+  L+  +V ++  +EG  +  P      
Sbjct: 207 KDGV---FTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQV-LRFVMEGGLLDKPDNCPDM 262
Query: 123 LSKLIRICMNEDPGKRPTF-DMVLPILDKMK 152
           L +L+R+C   +P  RP+F +++  I ++M+
Sbjct: 263 LFELMRMCWQYNPKMRPSFLEIISSIKEEME 293

>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor Kinase Length = 299

Iteration: 1
 Score = 58.2 bits (139), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 46/151 (30%), Positives = 75/151 (49%), Gaps = 13/151 (8%)
Query: 11  YLNSKKSKTSNAFLFCCQIDEDLTARIN----MADAQFSFQQR--GRCYYPA-WMSPEAL 63
           YLN+ K    +     C + ED T +I       D   +   R  G+   P  WMSPE+L
Sbjct: 138 YLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMSPESL 197
Query: 64  QKKPGDRNLEACDMWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISSH 122
           +           D+WSF V+LWE+AT  E P+  L+  +V ++  +EG  +  P      
Sbjct: 198 KDGV---FTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQV-LRFVMEGGLLDKPDNCPDM 253
Query: 123 LSKLIRICMNEDPGKRPTF-DMVLPILDKMK 152
           L +L+R+C   +P  RP+F +++  I ++M+
Sbjct: 254 LLELMRMCWQYNPKMRPSFLEIISSIKEEME 284

>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 38/130 (29%), Positives = 64/130 (49%), Gaps = 5/130 (3%)
Query: 25  FCCQIDEDLTARINMADAQFSFQQRGRCYYPAWMSPEALQKKPGDRNLEACDMWSFAVLL 84
             C++ +   +R+   D   +    G      W +PEA+  +       A D+WSF V++
Sbjct: 188 LVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAPEAIAFRTFS---SASDVWSFGVVM 244
Query: 85  WE-LATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDM 143
           WE LA  E P+ ++T  +V   V  EG R+  P G    L +L+  C ++D  +RP F  
Sbjct: 245 WEVLAYGERPYWNMTNRDVISSVE-EGYRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQ 303
Query: 144 VLPILDKMKR 153
           ++ +LD + R
Sbjct: 304 IVSVLDALIR 313

>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With Vuf 12058 Length = 285

Iteration: 1
 Score = 57.0 bits (136), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 34/130 (26%), Positives = 67/130 (51%), Gaps = 5/130 (3%)
Query: 25  FCCQIDEDLTARINMADAQFSFQQRGRCYYPAWMSPEALQKKPGDRNLEACDMWSFAVLL 84
             C++ +   +R+   D + ++  RG      W +PEA+  +   +   A D+WS+ +++
Sbjct: 147 LVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYR---KFTSASDVWSYGIVM 203
Query: 85  WE-LATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDM 143
           WE ++  E P+ D++  +V +K   EG R+  P      L +L+  C  ++   RP F  
Sbjct: 204 WEVMSYGERPYWDMSNQDV-IKAIEEGYRLPPPMDCPIALHQLMLDCWQKERSDRPKFGQ 262
Query: 144 VLPILDKMKR 153
           ++ +LDK+ R
Sbjct: 263 IVNMLDKLIR 272

>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain Length = 291

Iteration: 1
 Score = 57.0 bits (136), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 34/130 (26%), Positives = 67/130 (51%), Gaps = 5/130 (3%)
Query: 25  FCCQIDEDLTARINMADAQFSFQQRGRCYYPAWMSPEALQKKPGDRNLEACDMWSFAVLL 84
             C++ +   +R+   D + ++  RG      W +PEA+  +   +   A D+WS+ +++
Sbjct: 153 LVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYR---KFTSASDVWSYGIVM 209
Query: 85  WE-LATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDM 143
           WE ++  E P+ D++  +V +K   EG R+  P      L +L+  C  ++   RP F  
Sbjct: 210 WEVMSYGERPYWDMSNQDV-IKAIEEGYRLPPPMDCPIALHQLMLDCWQKERSDRPKFGQ 268
Query: 144 VLPILDKMKR 153
           ++ +LDK+ R
Sbjct: 269 IVNMLDKLIR 278

>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a) Length = 306

Iteration: 1
 Score = 57.0 bits (136), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 34/130 (26%), Positives = 67/130 (51%), Gaps = 5/130 (3%)
Query: 25  FCCQIDEDLTARINMADAQFSFQQRGRCYYPAWMSPEALQKKPGDRNLEACDMWSFAVLL 84
             C++ +   +R+   D + ++  RG      W +PEA+  +   +   A D+WS+ +++
Sbjct: 168 LVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYR---KFTSASDVWSYGIVM 224
Query: 85  WE-LATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDM 143
           WE ++  E P+ D++  +V +K   EG R+  P      L +L+  C  ++   RP F  
Sbjct: 225 WEVMSYGERPYWDMSNQDV-IKAIEEGYRLPPPMDCPIALHQLMLDCWQKERSDRPKFGQ 283
Query: 144 VLPILDKMKR 153
           ++ +LDK+ R
Sbjct: 284 IVNMLDKLIR 293

>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase In Complex With Arq 069 Length = 306

Iteration: 1
 Score = 56.6 bits (135), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 35/96 (36%), Positives = 51/96 (53%), Gaps = 5/96 (5%)
Query: 57  WMSPEALQKKPGDR-NLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITI 115
           WM+PEAL     DR      D+WSF VLLWE+ T         P+E   K+  EG R+  
Sbjct: 207 WMAPEAL----FDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDK 262
Query: 116 PPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKM 151
           P   ++ L  ++R C +  P +RPTF  ++  LD++
Sbjct: 263 PSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 298

>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fibroblast Growth Factor Receptor 1 Length = 310

Iteration: 1
 Score = 56.2 bits (134), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 35/96 (36%), Positives = 51/96 (53%), Gaps = 5/96 (5%)
Query: 57  WMSPEALQKKPGDR-NLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITI 115
           WM+PEAL     DR      D+WSF VLLWE+ T         P+E   K+  EG R+  
Sbjct: 211 WMAPEAL----FDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDK 266
Query: 116 PPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKM 151
           P   ++ L  ++R C +  P +RPTF  ++  LD++
Sbjct: 267 PSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 302

>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287

Iteration: 1
 Score = 56.2 bits (134), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 39/134 (29%), Positives = 64/134 (47%), Gaps = 7/134 (5%)
Query: 24  LFCCQIDEDLTARINMADAQFSFQQ----RGRCYYPAWMSPEALQKKPGDRNLEACDMWS 79
           +F   +DE+      +AD   S Q      G      WM+PE +  +  +   E  D +S
Sbjct: 155 IFLQSLDENAPVCAKVADFSLSQQSVHSVSGLLGNFQWMAPETIGAEE-ESYTEKADTYS 213
Query: 80  FAVLLWELATREVPFADLTPMEVGM--KVALEGLRITIPPGISSHLSKLIRICMNEDPGK 137
           FA++L+ + T E PF + +  ++     +  EGLR TIP      L  +I +C + DP K
Sbjct: 214 FAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKK 273
Query: 138 RPTFDMVLPILDKM 151
           RP F  ++  L ++
Sbjct: 274 RPHFSYIVKELSEL 287

>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase Domain With 3-(2,6-Dichloro-3, 5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1- Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398) Length = 382

Iteration: 1
 Score = 56.2 bits (134), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 35/96 (36%), Positives = 51/96 (53%), Gaps = 5/96 (5%)
Query: 57  WMSPEALQKKPGDR-NLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITI 115
           WM+PEAL     DR      D+WSF VLLWE+ T         P+E   K+  EG R+  
Sbjct: 259 WMAPEALF----DRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDK 314
Query: 116 PPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKM 151
           P   ++ L  ++R C +  P +RPTF  ++  LD++
Sbjct: 315 PSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 350

>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor Receptor 1 Kinase Domain In Complex With Compound 1 Length = 309

Iteration: 1
 Score = 56.2 bits (134), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 35/96 (36%), Positives = 51/96 (53%), Gaps = 5/96 (5%)
Query: 57  WMSPEALQKKPGDR-NLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITI 115
           WM+PEAL     DR      D+WSF VLLWE+ T         P+E   K+  EG R+  
Sbjct: 210 WMAPEAL----FDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDK 265
Query: 116 PPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKM 151
           P   ++ L  ++R C +  P +RPTF  ++  LD++
Sbjct: 266 PSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 301

>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3- Methoxybenzyl)-7-Azaindole Length = 302

Iteration: 1
 Score = 56.2 bits (134), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 35/96 (36%), Positives = 51/96 (53%), Gaps = 5/96 (5%)
Query: 57  WMSPEALQKKPGDR-NLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITI 115
           WM+PEAL     DR      D+WSF VLLWE+ T         P+E   K+  EG R+  
Sbjct: 203 WMAPEAL----FDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDK 258
Query: 116 PPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKM 151
           P   ++ L  ++R C +  P +RPTF  ++  LD++
Sbjct: 259 PSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 294

>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast Growth Factor Receptor 1 In Complex With 5-(2-Thienyl) Nicotinic Acid Length = 317

Iteration: 1
 Score = 56.2 bits (134), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 35/96 (36%), Positives = 51/96 (53%), Gaps = 5/96 (5%)
Query: 57  WMSPEALQKKPGDR-NLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITI 115
           WM+PEAL     DR      D+WSF VLLWE+ T         P+E   K+  EG R+  
Sbjct: 218 WMAPEAL----FDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDK 273
Query: 116 PPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKM 151
           P   ++ L  ++R C +  P +RPTF  ++  LD++
Sbjct: 274 PSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 309

>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor 1 Length = 317

Iteration: 1
 Score = 56.2 bits (134), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 35/96 (36%), Positives = 51/96 (53%), Gaps = 5/96 (5%)
Query: 57  WMSPEALQKKPGDR-NLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITI 115
           WM+PEAL     DR      D+WSF VLLWE+ T         P+E   K+  EG R+  
Sbjct: 218 WMAPEAL----FDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDK 273
Query: 116 PPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKM 151
           P   ++ L  ++R C +  P +RPTF  ++  LD++
Sbjct: 274 PSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 309

>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326

Iteration: 1
 Score = 56.2 bits (134), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 35/96 (36%), Positives = 51/96 (53%), Gaps = 5/96 (5%)
Query: 57  WMSPEALQKKPGDR-NLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITI 115
           WM+PEAL     DR      D+WSF VLLWE+ T         P+E   K+  EG R+  
Sbjct: 218 WMAPEAL----FDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDK 273
Query: 116 PPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKM 151
           P   ++ L  ++R C +  P +RPTF  ++  LD++
Sbjct: 274 PSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 309

>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287

Iteration: 1
 Score = 55.8 bits (133), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 39/134 (29%), Positives = 64/134 (47%), Gaps = 7/134 (5%)
Query: 24  LFCCQIDEDLTARINMADAQFSFQQ----RGRCYYPAWMSPEALQKKPGDRNLEACDMWS 79
           +F   +DE+      +AD   S Q      G      WM+PE +  +  +   E  D +S
Sbjct: 155 IFLQSLDENAPVCAKVADFGLSQQSVHSVSGLLGNFQWMAPETIGAEE-ESYTEKADTYS 213
Query: 80  FAVLLWELATREVPFADLTPMEVGM--KVALEGLRITIPPGISSHLSKLIRICMNEDPGK 137
           FA++L+ + T E PF + +  ++     +  EGLR TIP      L  +I +C + DP K
Sbjct: 214 FAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKK 273
Query: 138 RPTFDMVLPILDKM 151
           RP F  ++  L ++
Sbjct: 274 RPHFSYIVKELSEL 287

>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326

Iteration: 1
 Score = 55.8 bits (133), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 35/96 (36%), Positives = 51/96 (53%), Gaps = 5/96 (5%)
Query: 57  WMSPEALQKKPGDR-NLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITI 115
           WM+PEAL     DR      D+WSF VLLWE+ T         P+E   K+  EG R+  
Sbjct: 218 WMAPEAL----FDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDK 273
Query: 116 PPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKM 151
           P   ++ L  ++R C +  P +RPTF  ++  LD++
Sbjct: 274 PSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 309

>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine Length = 267

Iteration: 1
 Score = 55.5 bits (132), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 38/126 (30%), Positives = 67/126 (53%), Gaps = 7/126 (5%)
Query: 25  FCCQIDEDLTARINMADAQFSFQQRGRCYYPAWMSPEALQKKPGDRNLEACDMWSFAVLL 84
             C+I +   AR+ + D +++ ++ G  +   W +PEA+    G   +++ D+WSF +LL
Sbjct: 142 LSCKIADFGLARL-IEDNEYTARE-GAKFPIKWTAPEAINY--GTFTIKS-DVWSFGILL 196
Query: 85  WELATR-EVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDM 143
            E+ T   +P+  +T  EV   +   G R+  P      L +L+R+C  E P  RPTFD 
Sbjct: 197 TEIVTHGRIPYPGMTNPEVIQNLE-RGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDY 255
Query: 144 VLPILD 149
           +  +L+
Sbjct: 256 LRSVLE 261

>pdb|3B2T|A Chain A, Structure Of Phosphotransferase Length = 311

Iteration: 1
 Score = 55.5 bits (132), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 33/96 (34%), Positives = 53/96 (55%), Gaps = 5/96 (5%)
Query: 57  WMSPEALQKKPGDRNLEACDMWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITI 115
           WM+PEAL  +         D+WSF VL+WE+ T    P+  + P+E   K+  EG R+  
Sbjct: 212 WMAPEALFDR---VYTHQSDVWSFGVLMWEIFTLGGSPYPGI-PVEELFKLLKEGHRMDK 267
Query: 116 PPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKM 151
           P   ++ L  ++R C +  P +RPTF  ++  LD++
Sbjct: 268 PANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 303

>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase In Complex With Arq 069 Length = 313

Iteration: 1
 Score = 55.5 bits (132), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 33/96 (34%), Positives = 53/96 (55%), Gaps = 5/96 (5%)
Query: 57  WMSPEALQKKPGDRNLEACDMWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITI 115
           WM+PEAL  +         D+WSF VL+WE+ T    P+  + P+E   K+  EG R+  
Sbjct: 214 WMAPEALFDR---VYTHQSDVWSFGVLMWEIFTLGGSPYPGI-PVEELFKLLKEGHRMDK 269
Query: 116 PPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKM 151
           P   ++ L  ++R C +  P +RPTF  ++  LD++
Sbjct: 270 PANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 305

>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain Length = 316

Iteration: 1
 Score = 55.5 bits (132), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 33/96 (34%), Positives = 53/96 (55%), Gaps = 5/96 (5%)
Query: 57  WMSPEALQKKPGDRNLEACDMWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITI 115
           WM+PEAL  +         D+WSF VL+WE+ T    P+  + P+E   K+  EG R+  
Sbjct: 217 WMAPEALFDR---VYTHQSDVWSFGVLMWEIFTLGGSPYPGI-PVEELFKLLKEGHRMDK 272
Query: 116 PPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKM 151
           P   ++ L  ++R C +  P +RPTF  ++  LD++
Sbjct: 273 PANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 308

>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b Length = 277

Iteration: 1
 Score = 55.5 bits (132), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 38/126 (30%), Positives = 67/126 (53%), Gaps = 7/126 (5%)
Query: 25  FCCQIDEDLTARINMADAQFSFQQRGRCYYPAWMSPEALQKKPGDRNLEACDMWSFAVLL 84
             C+I +   AR+ + D +++ ++ G  +   W +PEA+    G   +++ D+WSF +LL
Sbjct: 152 LSCKIADFGLARL-IEDNEYTARE-GAKFPIKWTAPEAINY--GTFTIKS-DVWSFGILL 206
Query: 85  WELATR-EVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDM 143
            E+ T   +P+  +T  EV   +   G R+  P      L +L+R+C  E P  RPTFD 
Sbjct: 207 TEIVTHGRIPYPGMTNPEVIQNLE-RGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDY 265
Query: 144 VLPILD 149
           +  +L+
Sbjct: 266 LRSVLE 271

>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K641r Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 55.5 bits (132), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 33/96 (34%), Positives = 53/96 (55%), Gaps = 5/96 (5%)
Query: 57  WMSPEALQKKPGDRNLEACDMWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITI 115
           WM+PEAL  +         D+WSF VL+WE+ T    P+  + P+E   K+  EG R+  
Sbjct: 225 WMAPEALFDR---VYTHQSDVWSFGVLMWEIFTLGGSPYPGI-PVEELFKLLKEGHRMDK 280
Query: 116 PPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKM 151
           P   ++ L  ++R C +  P +RPTF  ++  LD++
Sbjct: 281 PANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316

>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic N549h Mutation Responsible For Crouzon Syndrome. Length = 324

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 33/96 (34%), Positives = 53/96 (55%), Gaps = 5/96 (5%)
Query: 57  WMSPEALQKKPGDRNLEACDMWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITI 115
           WM+PEAL  +         D+WSF VL+WE+ T    P+  + P+E   K+  EG R+  
Sbjct: 225 WMAPEALFDR---VYTHQSDVWSFGVLMWEIFTLGGSPYPGI-PVEELFKLLKEGHRMDK 280
Query: 116 PPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKM 151
           P   ++ L  ++R C +  P +RPTF  ++  LD++
Sbjct: 281 PANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316

>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K659n Mutation Responsible For An Unclassified Craniosynostosis Syndrome. Length = 324

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 33/96 (34%), Positives = 53/96 (55%), Gaps = 5/96 (5%)
Query: 57  WMSPEALQKKPGDRNLEACDMWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITI 115
           WM+PEAL  +         D+WSF VL+WE+ T    P+  + P+E   K+  EG R+  
Sbjct: 225 WMAPEALFDR---VYTHQSDVWSFGVLMWEIFTLGGSPYPGI-PVEELFKLLKEGHRMDK 280
Query: 116 PPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKM 151
           P   ++ L  ++R C +  P +RPTF  ++  LD++
Sbjct: 281 PANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316

>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck Length = 277

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 38/126 (30%), Positives = 67/126 (53%), Gaps = 7/126 (5%)
Query: 25  FCCQIDEDLTARINMADAQFSFQQRGRCYYPAWMSPEALQKKPGDRNLEACDMWSFAVLL 84
             C+I +   AR+ + D +++ ++ G  +   W +PEA+    G   +++ D+WSF +LL
Sbjct: 151 LSCKIADFGLARL-IEDNEYTARE-GAKFPIKWTAPEAINY--GTFTIKS-DVWSFGILL 205
Query: 85  WELATR-EVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDM 143
            E+ T   +P+  +T  EV   +   G R+  P      L +L+R+C  E P  RPTFD 
Sbjct: 206 TEIVTHGRIPYPGMTNPEVIQNLE-RGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDY 264
Query: 144 VLPILD 149
           +  +L+
Sbjct: 265 LRSVLE 270

>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck Length = 265

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 38/126 (30%), Positives = 67/126 (53%), Gaps = 7/126 (5%)
Query: 25  FCCQIDEDLTARINMADAQFSFQQRGRCYYPAWMSPEALQKKPGDRNLEACDMWSFAVLL 84
             C+I +   AR+ + D +++ ++ G  +   W +PEA+    G   +++ D+WSF +LL
Sbjct: 141 LSCKIADFGLARL-IEDNEYTARE-GAKFPIKWTAPEAINY--GTFTIKS-DVWSFGILL 195
Query: 85  WELATR-EVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDM 143
            E+ T   +P+  +T  EV   +   G R+  P      L +L+R+C  E P  RPTFD 
Sbjct: 196 TEIVTHGRIPYPGMTNPEVIQNLE-RGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDY 254
Query: 144 VLPILD 149
           +  +L+
Sbjct: 255 LRSVLE 260

>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck In Complex With Non-selective And Src Family Selective Kinase Inhibitors Length = 279

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 39/126 (30%), Positives = 67/126 (53%), Gaps = 7/126 (5%)
Query: 25  FCCQIDEDLTARINMADAQFSFQQRGRCYYPAWMSPEALQKKPGDRNLEACDMWSFAVLL 84
             C+I +   AR+ + DA+ + ++ G  +   W +PEA+    G   +++ D+WSF +LL
Sbjct: 146 LSCKIADFGLARL-IEDAEXTARE-GAKFPIKWTAPEAINY--GTFTIKS-DVWSFGILL 200
Query: 85  WELATR-EVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDM 143
            E+ T   +P+  +T  EV   +   G R+  P      L +L+R+C  E P  RPTFD 
Sbjct: 201 TEIVTHGRIPYPGMTNPEVIQNLE-RGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDY 259
Query: 144 VLPILD 149
           +  +L+
Sbjct: 260 LRSVLE 265

>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic E565g Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 33/96 (34%), Positives = 53/96 (55%), Gaps = 5/96 (5%)
Query: 57  WMSPEALQKKPGDRNLEACDMWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITI 115
           WM+PEAL  +         D+WSF VL+WE+ T    P+  + P+E   K+  EG R+  
Sbjct: 225 WMAPEALFDR---VYTHQSDVWSFGVLMWEIFTLGGSPYPGI-PVEELFKLLKEGHRMDK 280
Query: 116 PPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKM 151
           P   ++ L  ++R C +  P +RPTF  ++  LD++
Sbjct: 281 PANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316

>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic E565a Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 33/96 (34%), Positives = 53/96 (55%), Gaps = 5/96 (5%)
Query: 57  WMSPEALQKKPGDRNLEACDMWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITI 115
           WM+PEAL  +         D+WSF VL+WE+ T    P+  + P+E   K+  EG R+  
Sbjct: 225 WMAPEALFDR---VYTHQSDVWSFGVLMWEIFTLGGSPYPGI-PVEELFKLLKEGHRMDK 280
Query: 116 PPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKM 151
           P   ++ L  ++R C +  P +RPTF  ++  LD++
Sbjct: 281 PANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316

>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K526e Mutation Responsible For Crouzon Syndrome Length = 324

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 33/96 (34%), Positives = 53/96 (55%), Gaps = 5/96 (5%)
Query: 57  WMSPEALQKKPGDRNLEACDMWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITI 115
           WM+PEAL  +         D+WSF VL+WE+ T    P+  + P+E   K+  EG R+  
Sbjct: 225 WMAPEALFDR---VYTHQSDVWSFGVLMWEIFTLGGSPYPGI-PVEELFKLLKEGHRMDK 280
Query: 116 PPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKM 151
           P   ++ L  ++R C +  P +RPTF  ++  LD++
Sbjct: 281 PANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316

>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic N549t Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 55.1 bits (131), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 33/96 (34%), Positives = 53/96 (55%), Gaps = 5/96 (5%)
Query: 57  WMSPEALQKKPGDRNLEACDMWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITI 115
           WM+PEAL  +         D+WSF VL+WE+ T    P+  + P+E   K+  EG R+  
Sbjct: 225 WMAPEALFDR---VYTHQSDVWSFGVLMWEIFTLGGSPYPGI-PVEELFKLLKEGHRMDK 280
Query: 116 PPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKM 151
           P   ++ L  ++R C +  P +RPTF  ++  LD++
Sbjct: 281 PANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316

>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck Length = 271

Iteration: 1
 Score = 55.1 bits (131), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 38/126 (30%), Positives = 67/126 (53%), Gaps = 7/126 (5%)
Query: 25  FCCQIDEDLTARINMADAQFSFQQRGRCYYPAWMSPEALQKKPGDRNLEACDMWSFAVLL 84
             C+I +   AR+ + D +++ ++ G  +   W +PEA+    G   +++ D+WSF +LL
Sbjct: 146 LSCKIADFGLARL-IEDNEYTARE-GAKFPIKWTAPEAINY--GTFTIKS-DVWSFGILL 200
Query: 85  WELATR-EVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDM 143
            E+ T   +P+  +T  EV   +   G R+  P      L +L+R+C  E P  RPTFD 
Sbjct: 201 TEIVTHGRIPYPGMTNPEVIQNLE-RGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDY 259
Query: 144 VLPILD 149
           +  +L+
Sbjct: 260 LRSVLE 265

>pdb|2PL0|A Chain A, Lck Bound To Imatinib Length = 289

Iteration: 1
 Score = 55.1 bits (131), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 38/126 (30%), Positives = 67/126 (53%), Gaps = 7/126 (5%)
Query: 25  FCCQIDEDLTARINMADAQFSFQQRGRCYYPAWMSPEALQKKPGDRNLEACDMWSFAVLL 84
             C+I +   AR+ + D +++ ++ G  +   W +PEA+    G   +++ D+WSF +LL
Sbjct: 156 LSCKIADFGLARL-IEDNEYTARE-GAKFPIKWTAPEAINY--GTFTIKS-DVWSFGILL 210
Query: 85  WELATR-EVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDM 143
            E+ T   +P+  +T  EV   +   G R+  P      L +L+R+C  E P  RPTFD 
Sbjct: 211 TEIVTHGRIPYPGMTNPEVIQNLE-RGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDY 269
Query: 144 VLPILD 149
           +  +L+
Sbjct: 270 LRSVLE 275

>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild Type Fgf Receptor 2 (Fgfr2) Kinase Domain Length = 370

Iteration: 1
 Score = 55.1 bits (131), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 33/96 (34%), Positives = 53/96 (55%), Gaps = 5/96 (5%)
Query: 57  WMSPEALQKKPGDRNLEACDMWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITI 115
           WM+PEAL  +         D+WSF VL+WE+ T    P+  + P+E   K+  EG R+  
Sbjct: 271 WMAPEALFDR---VYTHQSDVWSFGVLMWEIFTLGGSPYPGI-PVEELFKLLKEGHRMDK 326
Query: 116 PPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKM 151
           P   ++ L  ++R C +  P +RPTF  ++  LD++
Sbjct: 327 PANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 362

>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain From D. Discoideum Bound To Appcp Length = 287

Iteration: 1
 Score = 55.1 bits (131), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 39/134 (29%), Positives = 64/134 (47%), Gaps = 7/134 (5%)
Query: 24  LFCCQIDEDLTARINMADAQFSFQQ----RGRCYYPAWMSPEALQKKPGDRNLEACDMWS 79
           +F   +DE+      +AD   S Q      G      WM+PE +  +  +   E  D +S
Sbjct: 155 IFLQSLDENAPVCAKVADFGTSQQSVHSVSGLLGNFQWMAPETIGAEE-ESYTEKADTYS 213
Query: 80  FAVLLWELATREVPFADLTPMEVGM--KVALEGLRITIPPGISSHLSKLIRICMNEDPGK 137
           FA++L+ + T E PF + +  ++     +  EGLR TIP      L  +I +C + DP K
Sbjct: 214 FAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKK 273
Query: 138 RPTFDMVLPILDKM 151
           RP F  ++  L ++
Sbjct: 274 RPHFSYIVKELSEL 287

>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains Trapped In Trans-Phosphorylation Reaction Length = 334

Iteration: 1
 Score = 55.1 bits (131), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 33/96 (34%), Positives = 53/96 (55%), Gaps = 5/96 (5%)
Query: 57  WMSPEALQKKPGDRNLEACDMWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITI 115
           WM+PEAL  +         D+WSF VL+WE+ T    P+  + P+E   K+  EG R+  
Sbjct: 225 WMAPEALFDR---VYTHQSDVWSFGVLMWEIFTLGGSPYPGI-PVEELFKLLKEGHRMDK 280
Query: 116 PPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKM 151
           P   ++ L  ++R C +  P +RPTF  ++  LD++
Sbjct: 281 PANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316

>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp Analog And Substrate Peptide Length = 334

Iteration: 1
 Score = 55.1 bits (131), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 33/96 (34%), Positives = 53/96 (55%), Gaps = 5/96 (5%)
Query: 57  WMSPEALQKKPGDRNLEACDMWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITI 115
           WM+PEAL  +         D+WSF VL+WE+ T    P+  + P+E   K+  EG R+  
Sbjct: 225 WMAPEALFDR---VYTHQSDVWSFGVLMWEIFTLGGSPYPGI-PVEELFKLLKEGHRMDK 280
Query: 116 PPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKM 151
           P   ++ L  ++R C +  P +RPTF  ++  LD++
Sbjct: 281 PANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316

>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With Its Activating Protein Tab1 Length = 307

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 29/99 (29%), Positives = 52/99 (52%), Gaps = 4/99 (4%)
Query: 56  AWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADL-TPMEVGMKVALEGLRIT 114
           AWM+PE  +   G    E CD++S+ ++LWE+ TR  PF ++  P    M     G R  
Sbjct: 168 AWMAPEVFE---GSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPP 224
Query: 115 IPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKMKR 153
           +   +   +  L+  C ++DP +RP+ + ++ I+  + R
Sbjct: 225 LIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMR 263

>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol Length = 315

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 29/99 (29%), Positives = 52/99 (52%), Gaps = 4/99 (4%)
Query: 56  AWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADL-TPMEVGMKVALEGLRIT 114
           AWM+PE  +   G    E CD++S+ ++LWE+ TR  PF ++  P    M     G R  
Sbjct: 169 AWMAPEVFE---GSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPP 225
Query: 115 IPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKMKR 153
           +   +   +  L+  C ++DP +RP+ + ++ I+  + R
Sbjct: 226 LIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMR 264

>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In Complex With Adp Length = 286

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 53/98 (54%), Gaps = 5/98 (5%)
Query: 57  WMSPEALQKKPGDRNLEACDMWSFAVLLWE-LATREVPFADLTPMEVGMKVALEGLRITI 115
           W +PEA+Q +   +   A D+WS+ +++WE ++  E P+ D+T  +V +    +  R+  
Sbjct: 180 WTAPEAIQYR---KFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDV-INAIEQDYRLPP 235
Query: 116 PPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKMKR 153
           P    S L +L+  C  +D   RP F  ++  LDKM R
Sbjct: 236 PMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKMIR 273

>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 312

Iteration: 1
 Score = 54.3 bits (129), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 53/98 (54%), Gaps = 5/98 (5%)
Query: 57  WMSPEALQKKPGDRNLEACDMWSFAVLLWE-LATREVPFADLTPMEVGMKVALEGLRITI 115
           W +PEA+Q +   +   A D+WS+ +++WE ++  E P+ D+T  +V +    +  R+  
Sbjct: 206 WTAPEAIQYR---KFTSASDVWSYGIVMWEVMSYGERPYWDMTNQDV-INAIEQDYRLPP 261
Query: 116 PPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKMKR 153
           P    S L +L+  C  +D   RP F  ++  LDKM R
Sbjct: 262 PMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKMIR 299

>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase Domain Of Human Lck, (Auto-Phosphorylated On Tyr394) Length = 285

Iteration: 1
 Score = 53.5 bits (127), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 32/94 (34%), Positives = 51/94 (54%), Gaps = 5/94 (5%)
Query: 57  WMSPEALQKKPGDRNLEACDMWSFAVLLWELATR-EVPFADLTPMEVGMKVALEGLRITI 115
           W +PEA+    G   +++ D+WSF +LL E+ T   +P+  +T  EV   +   G R+  
Sbjct: 182 WTAPEAINY--GTFTIKS-DVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLE-RGYRMVR 237
Query: 116 PPGISSHLSKLIRICMNEDPGKRPTFDMVLPILD 149
           P      L +L+R+C  E P  RPTFD +  +L+
Sbjct: 238 PDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 271

>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule W259 Length = 287

Iteration: 1
 Score = 53.5 bits (127), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 32/94 (34%), Positives = 51/94 (54%), Gaps = 5/94 (5%)
Query: 57  WMSPEALQKKPGDRNLEACDMWSFAVLLWELATR-EVPFADLTPMEVGMKVALEGLRITI 115
           W +PEA+    G   +++ D+WSF +LL E+ T   +P+  +T  EV   +   G R+  
Sbjct: 184 WTAPEAINY--GTFTIKS-DVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLE-RGYRMVR 239
Query: 116 PPGISSHLSKLIRICMNEDPGKRPTFDMVLPILD 149
           P      L +L+R+C  E P  RPTFD +  +L+
Sbjct: 240 PDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 273

>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck In Complex With Non-Selective And Src Family Selective Kinase Inhibitors Length = 279

Iteration: 1
 Score = 53.5 bits (127), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 32/94 (34%), Positives = 51/94 (54%), Gaps = 5/94 (5%)
Query: 57  WMSPEALQKKPGDRNLEACDMWSFAVLLWELATR-EVPFADLTPMEVGMKVALEGLRITI 115
           W +PEA+    G   +++ D+WSF +LL E+ T   +P+  +T  EV   +   G R+  
Sbjct: 176 WTAPEAINY--GTFTIKS-DVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLE-RGYRMVR 231
Query: 116 PPGISSHLSKLIRICMNEDPGKRPTFDMVLPILD 149
           P      L +L+R+C  E P  RPTFD +  +L+
Sbjct: 232 PDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 265

>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43 Bound To Lck Length = 273

Iteration: 1
 Score = 53.5 bits (127), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 32/94 (34%), Positives = 51/94 (54%), Gaps = 5/94 (5%)
Query: 57  WMSPEALQKKPGDRNLEACDMWSFAVLLWELATR-EVPFADLTPMEVGMKVALEGLRITI 115
           W +PEA+    G   +++ D+WSF +LL E+ T   +P+  +T  EV   +   G R+  
Sbjct: 178 WTAPEAINY--GTFTIKS-DVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLE-RGYRMVR 233
Query: 116 PPGISSHLSKLIRICMNEDPGKRPTFDMVLPILD 149
           P      L +L+R+C  E P  RPTFD +  +L+
Sbjct: 234 PDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 267

>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1 Bound To Lck Length = 272

Iteration: 1
 Score = 53.5 bits (127), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 32/94 (34%), Positives = 51/94 (54%), Gaps = 5/94 (5%)
Query: 57  WMSPEALQKKPGDRNLEACDMWSFAVLLWELATR-EVPFADLTPMEVGMKVALEGLRITI 115
           W +PEA+    G   +++ D+WSF +LL E+ T   +P+  +T  EV   +   G R+  
Sbjct: 177 WTAPEAINY--GTFTIKS-DVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLE-RGYRMVR 232
Query: 116 PPGISSHLSKLIRICMNEDPGKRPTFDMVLPILD 149
           P      L +L+R+C  E P  RPTFD +  +L+
Sbjct: 233 PDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 266

>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck), Activated Form (Auto-Phosphorylated On Tyr394) Length = 271

Iteration: 1
 Score = 53.1 bits (126), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 32/94 (34%), Positives = 51/94 (54%), Gaps = 5/94 (5%)
Query: 57  WMSPEALQKKPGDRNLEACDMWSFAVLLWELATR-EVPFADLTPMEVGMKVALEGLRITI 115
           W +PEA+    G   +++ D+WSF +LL E+ T   +P+  +T  EV   +   G R+  
Sbjct: 176 WTAPEAINY--GTFTIKS-DVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLE-RGYRMVR 231
Query: 116 PPGISSHLSKLIRICMNEDPGKRPTFDMVLPILD 149
           P      L +L+R+C  E P  RPTFD +  +L+
Sbjct: 232 PDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 265

>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule Inhibitor Length = 288

Iteration: 1
 Score = 53.1 bits (126), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 32/94 (34%), Positives = 51/94 (54%), Gaps = 5/94 (5%)
Query: 57  WMSPEALQKKPGDRNLEACDMWSFAVLLWELATR-EVPFADLTPMEVGMKVALEGLRITI 115
           W +PEA+    G   +++ D+WSF +LL E+ T   +P+  +T  EV   +   G R+  
Sbjct: 185 WTAPEAINY--GTFTIKS-DVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLE-RGYRMVR 240
Query: 116 PPGISSHLSKLIRICMNEDPGKRPTFDMVLPILD 149
           P      L +L+R+C  E P  RPTFD +  +L+
Sbjct: 241 PDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLE 274

>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A Thiazolopyrimidine Inhibitor Length = 324

Iteration: 1
 Score = 52.8 bits (125), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 40/146 (27%), Positives = 69/146 (47%), Gaps = 9/146 (6%)
Query: 11  YLNSKKSKTSNAFLFCCQIDEDLTARI---NMADAQFSFQQRGRCYYPA-WMSPEALQKK 66
           YL+ K+    N       + E+  A+I    ++  Q  + ++     P  WM+ E+L   
Sbjct: 154 YLSQKQFIHRNLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYS 213
Query: 67  PGDRNLEACDMWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISSHLSK 125
               N    D+WS+ VLLWE+ +    P+  +T  E+  K+  +G R+  P      +  
Sbjct: 214 VYTTN---SDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLP-QGYRLEKPLNCDDEVYD 269
Query: 126 LIRICMNEDPGKRPTFDMVLPILDKM 151
           L+R C  E P +RP+F  +L  L++M
Sbjct: 270 LMRQCWREKPYERPSFAQILVSLNRM 295

>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of Triazine Derivatives As Potent, Selective Tie-2 Inhibitors Length = 317

Iteration: 1
 Score = 52.8 bits (125), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 50/96 (52%), Gaps = 5/96 (5%)
Query: 57  WMSPEALQKKPGDRNLEACDMWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITI 115
           WM+ E+L       N    D+WS+ VLLWE+ +    P+  +T  E+  K+  +G R+  
Sbjct: 197 WMAIESLNYSVYTTN---SDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLP-QGYRLEK 252
Query: 116 PPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKM 151
           P      +  L+R C  E P +RP+F  +L  L++M
Sbjct: 253 PLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRM 288

>pdb|1FVR|A Chain A, Tie2 Kinase Domain Length = 327

Iteration: 1
 Score = 52.8 bits (125), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 50/96 (52%), Gaps = 5/96 (5%)
Query: 57  WMSPEALQKKPGDRNLEACDMWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITI 115
           WM+ E+L       N    D+WS+ VLLWE+ +    P+  +T  E+  K+  +G R+  
Sbjct: 207 WMAIESLNYSVYTTN---SDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLP-QGYRLEK 262
Query: 116 PPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKM 151
           P      +  L+R C  E P +RP+F  +L  L++M
Sbjct: 263 PLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRM 298

>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor. Length = 310

Iteration: 1
 Score = 52.4 bits (124), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 41/141 (29%), Positives = 67/141 (47%), Gaps = 14/141 (9%)
Query: 11  YLNSKKSKTSNAFLFCCQIDEDLTARI-------NMADAQF-SFQQRGRCYYPA-WMSPE 61
           YL SKK    +     C +DE  T ++       +M D ++ S   +     P  WM+ E
Sbjct: 148 YLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 207
Query: 62  ALQKKPGDRNLEACDMWSFAVLLWELATREV-PFADLTPMEVGMKVALEGLRITIPPGIS 120
           +LQ +   +     D+WSF VLLWEL TR   P+ D+   ++ + + L+G R+  P    
Sbjct: 208 SLQTQ---KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYL-LQGRRLLQPEYCP 263
Query: 121 SHLSKLIRICMNEDPGKRPTF 141
             L +++  C +     RP+F
Sbjct: 264 DPLYEVMLKCWHPKAEMRPSF 284

>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor Length = 298

Iteration: 1
 Score = 52.4 bits (124), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 41/141 (29%), Positives = 67/141 (47%), Gaps = 14/141 (9%)
Query: 11  YLNSKKSKTSNAFLFCCQIDEDLTARI-------NMADAQF-SFQQRGRCYYPA-WMSPE 61
           YL SKK    +     C +DE  T ++       +M D ++ S   +     P  WM+ E
Sbjct: 143 YLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 202
Query: 62  ALQKKPGDRNLEACDMWSFAVLLWELATREV-PFADLTPMEVGMKVALEGLRITIPPGIS 120
           +LQ +   +     D+WSF VLLWEL TR   P+ D+   ++ + + L+G R+  P    
Sbjct: 203 SLQTQ---KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYL-LQGRRLLQPEYCP 258
Query: 121 SHLSKLIRICMNEDPGKRPTF 141
             L +++  C +     RP+F
Sbjct: 259 DPLYEVMLKCWHPKAEMRPSF 279

>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor Length = 319

Iteration: 1
 Score = 52.4 bits (124), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 41/141 (29%), Positives = 67/141 (47%), Gaps = 14/141 (9%)
Query: 11  YLNSKKSKTSNAFLFCCQIDEDLTARI-------NMADAQF-SFQQRGRCYYPA-WMSPE 61
           YL SKK    +     C +DE  T ++       +M D ++ S   +     P  WM+ E
Sbjct: 167 YLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 226
Query: 62  ALQKKPGDRNLEACDMWSFAVLLWELATREV-PFADLTPMEVGMKVALEGLRITIPPGIS 120
           +LQ +   +     D+WSF VLLWEL TR   P+ D+   ++ + + L+G R+  P    
Sbjct: 227 SLQTQ---KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYL-LQGRRLLQPEYCP 282
Query: 121 SHLSKLIRICMNEDPGKRPTF 141
             L +++  C +     RP+F
Sbjct: 283 DPLYEVMLKCWHPKAEMRPSF 303

>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The Dually-Phosphorylated, Activated State Length = 308

Iteration: 1
 Score = 52.4 bits (124), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 41/141 (29%), Positives = 67/141 (47%), Gaps = 14/141 (9%)
Query: 11  YLNSKKSKTSNAFLFCCQIDEDLTARI-------NMADAQF-SFQQRGRCYYPA-WMSPE 61
           YL SKK    +     C +DE  T ++       +M D ++ S   +     P  WM+ E
Sbjct: 148 YLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 207
Query: 62  ALQKKPGDRNLEACDMWSFAVLLWELATREV-PFADLTPMEVGMKVALEGLRITIPPGIS 120
           +LQ +   +     D+WSF VLLWEL TR   P+ D+   ++ + + L+G R+  P    
Sbjct: 208 SLQTQ---KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYL-LQGRRLLQPEYCP 263
Query: 121 SHLSKLIRICMNEDPGKRPTF 141
             L +++  C +     RP+F
Sbjct: 264 DPLYEVMLKCWHPKAEMRPSF 284

>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain Of C-Met Length = 306

Iteration: 1
 Score = 52.4 bits (124), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 41/141 (29%), Positives = 67/141 (47%), Gaps = 14/141 (9%)
Query: 11  YLNSKKSKTSNAFLFCCQIDEDLTARI-------NMADAQF-SFQQRGRCYYPA-WMSPE 61
           YL SKK    +     C +DE  T ++       +M D ++ S   +     P  WM+ E
Sbjct: 145 YLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 204
Query: 62  ALQKKPGDRNLEACDMWSFAVLLWELATREV-PFADLTPMEVGMKVALEGLRITIPPGIS 120
           +LQ +   +     D+WSF VLLWEL TR   P+ D+   ++ + + L+G R+  P    
Sbjct: 205 SLQTQ---KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYL-LQGRRLLQPEYCP 260
Query: 121 SHLSKLIRICMNEDPGKRPTF 141
             L +++  C +     RP+F
Sbjct: 261 DPLYEVMLKCWHPKAEMRPSF 281

>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor Length = 292

Iteration: 1
 Score = 52.4 bits (124), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 41/141 (29%), Positives = 67/141 (47%), Gaps = 14/141 (9%)
Query: 11  YLNSKKSKTSNAFLFCCQIDEDLTARI-------NMADAQF-SFQQRGRCYYPA-WMSPE 61
           YL SKK    +     C +DE  T ++       +M D ++ S   +     P  WM+ E
Sbjct: 140 YLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 199
Query: 62  ALQKKPGDRNLEACDMWSFAVLLWELATREV-PFADLTPMEVGMKVALEGLRITIPPGIS 120
           +LQ +   +     D+WSF VLLWEL TR   P+ D+   ++ + + L+G R+  P    
Sbjct: 200 SLQTQ---KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYL-LQGRRLLQPEYCP 255
Query: 121 SHLSKLIRICMNEDPGKRPTF 141
             L +++  C +     RP+F
Sbjct: 256 DPLYEVMLKCWHPKAEMRPSF 276

>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine Inhibitor 13 Length = 309

Iteration: 1
 Score = 52.4 bits (124), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 41/141 (29%), Positives = 67/141 (47%), Gaps = 14/141 (9%)
Query: 11  YLNSKKSKTSNAFLFCCQIDEDLTARI-------NMADAQF-SFQQRGRCYYPA-WMSPE 61
           YL SKK    +     C +DE  T ++       +M D ++ S   +     P  WM+ E
Sbjct: 147 YLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 206
Query: 62  ALQKKPGDRNLEACDMWSFAVLLWELATREV-PFADLTPMEVGMKVALEGLRITIPPGIS 120
           +LQ +   +     D+WSF VLLWEL TR   P+ D+   ++ + + L+G R+  P    
Sbjct: 207 SLQTQ---KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYL-LQGRRLLQPEYCP 262
Query: 121 SHLSKLIRICMNEDPGKRPTF 141
             L +++  C +     RP+F
Sbjct: 263 DPLYEVMLKCWHPKAEMRPSF 283

>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880 (Gsk1 Length = 302

Iteration: 1
 Score = 52.4 bits (124), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 41/141 (29%), Positives = 67/141 (47%), Gaps = 14/141 (9%)
Query: 11  YLNSKKSKTSNAFLFCCQIDEDLTARI-------NMADAQF-SFQQRGRCYYPA-WMSPE 61
           YL SKK    +     C +DE  T ++       +M D ++ S   +     P  WM+ E
Sbjct: 146 YLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 205
Query: 62  ALQKKPGDRNLEACDMWSFAVLLWELATREV-PFADLTPMEVGMKVALEGLRITIPPGIS 120
           +LQ +   +     D+WSF VLLWEL TR   P+ D+   ++ + + L+G R+  P    
Sbjct: 206 SLQTQ---KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYL-LQGRRLLQPEYCP 261
Query: 121 SHLSKLIRICMNEDPGKRPTF 141
             L +++  C +     RP+F
Sbjct: 262 DPLYEVMLKCWHPKAEMRPSF 282

>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase Length = 318

Iteration: 1
 Score = 52.4 bits (124), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 41/141 (29%), Positives = 67/141 (47%), Gaps = 14/141 (9%)
Query: 11  YLNSKKSKTSNAFLFCCQIDEDLTARI-------NMADAQF-SFQQRGRCYYPA-WMSPE 61
           YL SKK    +     C +DE  T ++       +M D ++ S   +     P  WM+ E
Sbjct: 166 YLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALE 225
Query: 62  ALQKKPGDRNLEACDMWSFAVLLWELATREV-PFADLTPMEVGMKVALEGLRITIPPGIS 120
           +LQ +   +     D+WSF VLLWEL TR   P+ D+   ++ + + L+G R+  P    
Sbjct: 226 SLQTQ---KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYL-LQGRRLLQPEYCP 281
Query: 121 SHLSKLIRICMNEDPGKRPTF 141
             L +++  C +     RP+F
Sbjct: 282 DPLYEVMLKCWHPKAEMRPSF 302

>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase Complex With Dasatinib Length = 268

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 35/135 (25%), Positives = 67/135 (49%), Gaps = 13/135 (9%)
Query: 27  CQIDEDLTARIN-------MADAQFSFQQRGRCYYPAWMSPEALQKKPGDRNLEACDMWS 79
           C +D DL  +++       + D Q+     G  +   W +PE        +     D+W+
Sbjct: 135 CLVDRDLCVKVSDFGMTRYVLDDQY-VSSVGTKFPVKWSAPEVFHYF---KYSSKSDVWA 190
Query: 80  FAVLLWEL-ATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKR 138
           F +L+WE+ +  ++P+   T  EV +KV+ +G R+  P   S  + +++  C +E P KR
Sbjct: 191 FGILMWEVFSLGKMPYDLYTNSEVVLKVS-QGHRLYRPHLASDTIYQIMYSCWHELPEKR 249
Query: 139 PTFDMVLPILDKMKR 153
           PTF  +L  ++ ++ 
Sbjct: 250 PTFQQLLSSIEPLRE 264

>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With The Microbial Alkaloid K-252a Length = 312

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 41/141 (29%), Positives = 67/141 (47%), Gaps = 14/141 (9%)
Query: 11  YLNSKKSKTSNAFLFCCQIDEDLTARI-------NMADAQF-SFQQRGRCYYPA-WMSPE 61
           +L SKK    +     C +DE  T ++       +M D +F S   +     P  WM+ E
Sbjct: 146 FLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALE 205
Query: 62  ALQKKPGDRNLEACDMWSFAVLLWELATREV-PFADLTPMEVGMKVALEGLRITIPPGIS 120
           +LQ +   +     D+WSF VLLWEL TR   P+ D+   ++ + + L+G R+  P    
Sbjct: 206 SLQTQ---KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYL-LQGRRLLQPEYCP 261
Query: 121 SHLSKLIRICMNEDPGKRPTF 141
             L +++  C +     RP+F
Sbjct: 262 DPLYEVMLKCWHPKAEMRPSF 282

>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972 Length = 314

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 41/141 (29%), Positives = 67/141 (47%), Gaps = 14/141 (9%)
Query: 11  YLNSKKSKTSNAFLFCCQIDEDLTARI-------NMADAQF-SFQQRGRCYYPA-WMSPE 61
           +L SKK    +     C +DE  T ++       +M D +F S   +     P  WM+ E
Sbjct: 148 FLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALE 207
Query: 62  ALQKKPGDRNLEACDMWSFAVLLWELATREV-PFADLTPMEVGMKVALEGLRITIPPGIS 120
           +LQ +   +     D+WSF VLLWEL TR   P+ D+   ++ + + L+G R+  P    
Sbjct: 208 SLQTQ---KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYL-LQGRRLLQPEYCP 263
Query: 121 SHLSKLIRICMNEDPGKRPTF 141
             L +++  C +     RP+F
Sbjct: 264 DPLYEVMLKCWHPKAEMRPSF 284

>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With 6-Benzyloxyquinoline Inhibitor Length = 319

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 41/141 (29%), Positives = 67/141 (47%), Gaps = 14/141 (9%)
Query: 11  YLNSKKSKTSNAFLFCCQIDEDLTARI-------NMADAQF-SFQQRGRCYYPA-WMSPE 61
           +L SKK    +     C +DE  T ++       +M D +F S   +     P  WM+ E
Sbjct: 153 FLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALE 212
Query: 62  ALQKKPGDRNLEACDMWSFAVLLWELATREV-PFADLTPMEVGMKVALEGLRITIPPGIS 120
           +LQ +   +     D+WSF VLLWEL TR   P+ D+   ++ + + L+G R+  P    
Sbjct: 213 SLQTQ---KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYL-LQGRRLLQPEYCP 268
Query: 121 SHLSKLIRICMNEDPGKRPTF 141
             L +++  C +     RP+F
Sbjct: 269 DPLYEVMLKCWHPKAEMRPSF 289

>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With A Aminopyridine Based Inhibitor Length = 314

Iteration: 1
 Score = 52.0 bits (123), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/141 (29%), Positives = 67/141 (47%), Gaps = 14/141 (9%)
Query: 11  YLNSKKSKTSNAFLFCCQIDEDLTARI-------NMADAQF-SFQQRGRCYYPA-WMSPE 61
           +L SKK    +     C +DE  T ++       +M D +F S   +     P  WM+ E
Sbjct: 148 FLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALE 207
Query: 62  ALQKKPGDRNLEACDMWSFAVLLWELATREV-PFADLTPMEVGMKVALEGLRITIPPGIS 120
           +LQ +   +     D+WSF VLLWEL TR   P+ D+   ++ + + L+G R+  P    
Sbjct: 208 SLQTQ---KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYL-LQGRRLLQPEYCP 263
Query: 121 SHLSKLIRICMNEDPGKRPTF 141
             L +++  C +     RP+F
Sbjct: 264 DPLYEVMLKCWHPKAEMRPSF 284

>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1 Length = 317

Iteration: 1
 Score = 51.6 bits (122), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/141 (29%), Positives = 67/141 (47%), Gaps = 14/141 (9%)
Query: 11  YLNSKKSKTSNAFLFCCQIDEDLTARI-------NMADAQF-SFQQRGRCYYPA-WMSPE 61
           +L SKK    +     C +DE  T ++       +M D +F S   +     P  WM+ E
Sbjct: 149 FLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALE 208
Query: 62  ALQKKPGDRNLEACDMWSFAVLLWELATREV-PFADLTPMEVGMKVALEGLRITIPPGIS 120
           +LQ +   +     D+WSF VLLWEL TR   P+ D+   ++ + + L+G R+  P    
Sbjct: 209 SLQTQ---KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYL-LQGRRLLQPEYCP 264
Query: 121 SHLSKLIRICMNEDPGKRPTF 141
             L +++  C +     RP+F
Sbjct: 265 DPLYEVMLKCWHPKAEMRPSF 285

>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole Inhibitor Length = 291

Iteration: 1
 Score = 51.6 bits (122), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 30/98 (30%), Positives = 52/98 (53%), Gaps = 5/98 (5%)
Query: 57  WMSPEALQKKPGDRNLEACDMWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITI 115
           W +PEA+  +   +   A D WS+ +++WE+ +  E P+ D++  +V +    +  R+  
Sbjct: 187 WTAPEAIAFR---KFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDV-INAIEQDYRLPP 242
Query: 116 PPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKMKR 153
           PP   + L +L+  C  +D   RP F  V+  LDKM R
Sbjct: 243 PPDCPTSLHQLMLDCWQKDRNARPRFPQVVSALDKMIR 280

>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1 Length = 317

Iteration: 1
 Score = 51.6 bits (122), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/141 (29%), Positives = 67/141 (47%), Gaps = 14/141 (9%)
Query: 11  YLNSKKSKTSNAFLFCCQIDEDLTARI-------NMADAQF-SFQQRGRCYYPA-WMSPE 61
           +L SKK    +     C +DE  T ++       +M D +F S   +     P  WM+ E
Sbjct: 149 FLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALE 208
Query: 62  ALQKKPGDRNLEACDMWSFAVLLWELATREV-PFADLTPMEVGMKVALEGLRITIPPGIS 120
           +LQ +   +     D+WSF VLLWEL TR   P+ D+   ++ + + L+G R+  P    
Sbjct: 209 SLQTQ---KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYL-LQGRRLLQPEYCP 264
Query: 121 SHLSKLIRICMNEDPGKRPTF 141
             L +++  C +     RP+F
Sbjct: 265 DPLYEVMLKCWHPKAEMRPSF 285

>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The Hepatocyte Growth Factor Receptor C-Met In Complex With A Pyrrolotriazine Based Inhibitor Length = 373

Iteration: 1
 Score = 51.6 bits (122), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/141 (29%), Positives = 67/141 (47%), Gaps = 14/141 (9%)
Query: 11  YLNSKKSKTSNAFLFCCQIDEDLTARI-------NMADAQF-SFQQRGRCYYPA-WMSPE 61
           +L SKK    +     C +DE  T ++       +M D +F S   +     P  WM+ E
Sbjct: 207 FLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALE 266
Query: 62  ALQKKPGDRNLEACDMWSFAVLLWELATREV-PFADLTPMEVGMKVALEGLRITIPPGIS 120
           +LQ +   +     D+WSF VLLWEL TR   P+ D+   ++ + + L+G R+  P    
Sbjct: 267 SLQTQ---KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYL-LQGRRLLQPEYCP 322
Query: 121 SHLSKLIRICMNEDPGKRPTF 141
             L +++  C +     RP+F
Sbjct: 323 DPLYEVMLKCWHPKAEMRPSF 343

>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex Length = 302

Iteration: 1
 Score = 51.6 bits (122), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 30/98 (30%), Positives = 52/98 (53%), Gaps = 5/98 (5%)
Query: 57  WMSPEALQKKPGDRNLEACDMWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITI 115
           W +PEA+  +   +   A D WS+ +++WE+ +  E P+ D++  +V +    +  R+  
Sbjct: 189 WTAPEAIAFR---KFTSASDAWSYGIVMWEVMSFGERPYWDMSNQDV-INAIEQDYRLPP 244
Query: 116 PPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKMKR 153
           PP   + L +L+  C  +D   RP F  V+  LDKM R
Sbjct: 245 PPDCPTSLHQLMLDCWQKDRNARPRFPQVVSALDKMIR 282

>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 277

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/126 (30%), Positives = 63/126 (50%), Gaps = 7/126 (5%)
Query: 25  FCCQIDEDLTARINMADAQFSFQQRGRCYYPAWMSPEALQKKPGDRNLEACDMWSFAVLL 84
             C++ +   AR+ + D +++ +Q G  +   W +PEA       R     D+WSF +LL
Sbjct: 142 LVCKVADFGLARL-IEDNEYTARQ-GAKFPIKWTAPEAALY---GRFTIKSDVWSFGILL 196
Query: 85  WELATR-EVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDM 143
            EL T+  VP+  +   EV  +V   G R+  PP     L  L+  C  +DP +RPTF+ 
Sbjct: 197 TELTTKGRVPYPGMVNREVLDQVE-RGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEY 255
Query: 144 VLPILD 149
           +   L+
Sbjct: 256 LQAFLE 261

>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation Length = 286

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/126 (30%), Positives = 63/126 (50%), Gaps = 7/126 (5%)
Query: 25  FCCQIDEDLTARINMADAQFSFQQRGRCYYPAWMSPEALQKKPGDRNLEACDMWSFAVLL 84
             C++ +   AR+ + D +++ +Q G  +   W +PEA       R     D+WSF +LL
Sbjct: 151 LVCKVADFGLARL-IEDNEYTARQ-GAKFPIKWTAPEAALY---GRFTIKSDVWSFGILL 205
Query: 85  WELATR-EVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDM 143
            EL T+  VP+  +   EV  +V   G R+  PP     L  L+  C  +DP +RPTF+ 
Sbjct: 206 TELTTKGRVPYPGMVNREVLDQVE-RGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEY 264
Query: 144 VLPILD 149
           +   L+
Sbjct: 265 LQAFLE 270

>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src Tyrosine Kinase Domain Complexed With Imatinib Length = 286

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/126 (30%), Positives = 63/126 (50%), Gaps = 7/126 (5%)
Query: 25  FCCQIDEDLTARINMADAQFSFQQRGRCYYPAWMSPEALQKKPGDRNLEACDMWSFAVLL 84
             C++ +   AR+ + D +++ +Q G  +   W +PEA       R     D+WSF +LL
Sbjct: 151 LVCKVADFGLARL-IEDNEYTARQ-GAKFPIKWTAPEAALY---GRFTIKSDVWSFGILL 205
Query: 85  WELATR-EVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDM 143
            EL T+  VP+  +   EV  +V   G R+  PP     L  L+  C  +DP +RPTF+ 
Sbjct: 206 TELTTKGRVPYPGMVNREVLDQVE-RGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEY 264
Query: 144 VLPILD 149
           +   L+
Sbjct: 265 LQAFLE 270

>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In Complex With The Cancer Drug Imatinib. Length = 286

Iteration: 1
 Score = 51.2 bits (121), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 39/126 (30%), Positives = 63/126 (50%), Gaps = 7/126 (5%)
Query: 25  FCCQIDEDLTARINMADAQFSFQQRGRCYYPAWMSPEALQKKPGDRNLEACDMWSFAVLL 84
             C++ +   AR+ + D +++ +Q G  +   W +PEA       R     D+WSF +LL
Sbjct: 151 LVCKVADFGLARL-IEDNEYTARQ-GAKFPIKWTAPEAALY---GRFTIKSDVWSFGILL 205
Query: 85  WELATR-EVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDM 143
            EL T+  VP+  +   EV  +V   G R+  PP     L  L+  C  +DP +RPTF+ 
Sbjct: 206 TELTTKGRVPYPGMVNREVLDQVE-RGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEY 264
Query: 144 VLPILD 149
           +   L+
Sbjct: 265 LQAFLE 270

>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To Vinylsulfonamide- Pyrazolopyrimidine 9 Length = 286

Iteration: 1
 Score = 51.2 bits (121), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 39/126 (30%), Positives = 63/126 (50%), Gaps = 7/126 (5%)
Query: 25  FCCQIDEDLTARINMADAQFSFQQRGRCYYPAWMSPEALQKKPGDRNLEACDMWSFAVLL 84
             C++ +   AR+ + D +++ +Q G  +   W +PEA       R     D+WSF +LL
Sbjct: 151 LVCKVADFGLARL-IEDNEYTARQ-GAKFPIKWTAPEAALY---GRFTIKSDVWSFGILL 205
Query: 85  WELATR-EVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDM 143
            EL T+  VP+  +   EV  +V   G R+  PP     L  L+  C  +DP +RPTF+ 
Sbjct: 206 TELTTKGRVPYPGMVNREVLDQVE-RGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEY 264
Query: 144 VLPILD 149
           +   L+
Sbjct: 265 LQAFLE 270

>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor Mc4b Length = 275

Iteration: 1
 Score = 50.8 bits (120), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 39/126 (30%), Positives = 63/126 (50%), Gaps = 7/126 (5%)
Query: 25  FCCQIDEDLTARINMADAQFSFQQRGRCYYPAWMSPEALQKKPGDRNLEACDMWSFAVLL 84
             C++ +   AR+ + D +++ +Q G  +   W +PEA       R     D+WSF +LL
Sbjct: 140 LVCKVADFGLARL-IEDNEYTARQ-GAKFPIKWTAPEAALY---GRFTIKSDVWSFGILL 194
Query: 85  WELATR-EVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDM 143
            EL T+  VP+  +   EV  +V   G R+  PP     L  L+  C  +DP +RPTF+ 
Sbjct: 195 TELTTKGRVPYPGMVNREVLDQVE-RGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEY 253
Query: 144 VLPILD 149
           +   L+
Sbjct: 254 LQAFLE 259

>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Covalent Inhibitor Length = 286

Iteration: 1
 Score = 50.8 bits (120), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 39/126 (30%), Positives = 63/126 (50%), Gaps = 7/126 (5%)
Query: 25  FCCQIDEDLTARINMADAQFSFQQRGRCYYPAWMSPEALQKKPGDRNLEACDMWSFAVLL 84
             C++ +   AR+ + D +++ +Q G  +   W +PEA       R     D+WSF +LL
Sbjct: 151 LVCKVADFGLARL-IEDNEYTARQ-GAKFPIKWTAPEAALY---GRFTIKSDVWSFGILL 205
Query: 85  WELATR-EVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDM 143
            EL T+  VP+  +   EV  +V   G R+  PP     L  L+  C  +DP +RPTF+ 
Sbjct: 206 TELTTKGRVPYPGMVNREVLDQVE-RGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEY 264
Query: 144 VLPILD 149
           +   L+
Sbjct: 265 LQAFLE 270

>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase Activity Length = 286

Iteration: 1
 Score = 50.8 bits (120), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 39/126 (30%), Positives = 63/126 (50%), Gaps = 7/126 (5%)
Query: 25  FCCQIDEDLTARINMADAQFSFQQRGRCYYPAWMSPEALQKKPGDRNLEACDMWSFAVLL 84
             C++ +   AR+ + D +++ +Q G  +   W +PEA       R     D+WSF +LL
Sbjct: 151 LVCKVADFGLARL-IEDNEYTARQ-GAKFPIKWTAPEAALY---GRFTIKSDVWSFGILL 205
Query: 85  WELATR-EVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDM 143
            EL T+  VP+  +   EV  +V   G R+  PP     L  L+  C  +DP +RPTF+ 
Sbjct: 206 TELTTKGRVPYPGMVNREVLDQVE-RGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEY 264
Query: 144 VLPILD 149
           +   L+
Sbjct: 265 LQAFLE 270

>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With Irreversible Inhibitor Length = 286

Iteration: 1
 Score = 50.8 bits (120), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 39/126 (30%), Positives = 63/126 (50%), Gaps = 7/126 (5%)
Query: 25  FCCQIDEDLTARINMADAQFSFQQRGRCYYPAWMSPEALQKKPGDRNLEACDMWSFAVLL 84
             C++ +   AR+ + D +++ +Q G  +   W +PEA       R     D+WSF +LL
Sbjct: 151 LVCKVADFGLARL-IEDNEYTARQ-GAKFPIKWTAPEAALY---GRFTIKSDVWSFGILL 205
Query: 85  WELATR-EVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDM 143
            EL T+  VP+  +   EV  +V   G R+  PP     L  L+  C  +DP +RPTF+ 
Sbjct: 206 TELTTKGRVPYPGMVNREVLDQVE-RGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEY 264
Query: 144 VLPILD 149
           +   L+
Sbjct: 265 LQAFLE 270

>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target Length = 303

Iteration: 1
 Score = 50.8 bits (120), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 50/95 (52%), Gaps = 12/95 (12%)
Query: 55  PAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRIT 114
           P WM+PE +++  G  + +A D+WSF +   ELAT   P+    PM+V M + L+    +
Sbjct: 190 PCWMAPEVMEQVRG-YDFKA-DIWSFGITAIELATGAAPYHKYPPMKVLM-LTLQNDPPS 246
Query: 115 IPPGI---------SSHLSKLIRICMNEDPGKRPT 140
           +  G+              K+I +C+ +DP KRPT
Sbjct: 247 LETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPT 281

>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain Length = 290

Iteration: 1
 Score = 50.8 bits (120), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 50/95 (52%), Gaps = 12/95 (12%)
Query: 55  PAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRIT 114
           P WM+PE +++  G  + +A D+WSF +   ELAT   P+    PM+V M + L+    +
Sbjct: 185 PCWMAPEVMEQVRG-YDFKA-DIWSFGITAIELATGAAPYHKYPPMKVLM-LTLQNDPPS 241
Query: 115 IPPGI---------SSHLSKLIRICMNEDPGKRPT 140
           +  G+              K+I +C+ +DP KRPT
Sbjct: 242 LETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPT 276

>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In Complex With An Mk-2461 Analog With Specificity For The Activated Receptor Length = 307

Iteration: 1
 Score = 50.4 bits (119), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 41/141 (29%), Positives = 66/141 (46%), Gaps = 14/141 (9%)
Query: 11  YLNSKKSKTSNAFLFCCQIDEDLTARI-------NMADAQF-SFQQRGRCYYPA-WMSPE 61
           YL SKK    +     C +DE  T ++       +M D +  S   +     P  WM+ E
Sbjct: 147 YLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALE 206
Query: 62  ALQKKPGDRNLEACDMWSFAVLLWELATREV-PFADLTPMEVGMKVALEGLRITIPPGIS 120
           +LQ +   +     D+WSF VLLWEL TR   P+ D+   ++ + + L+G R+  P    
Sbjct: 207 SLQTQ---KFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYL-LQGRRLLQPEYCP 262
Query: 121 SHLSKLIRICMNEDPGKRPTF 141
             L +++  C +     RP+F
Sbjct: 263 DPLYEVMLKCWHPKAEMRPSF 283

>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase Length = 453

Iteration: 1
 Score = 50.4 bits (119), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 38/126 (30%), Positives = 62/126 (49%), Gaps = 7/126 (5%)
Query: 25  FCCQIDEDLTARINMADAQFSFQQRGRCYYPAWMSPEALQKKPGDRNLEACDMWSFAVLL 84
             C++ +    R+ + D +++ +Q G  +   W +PEA       R     D+WSF +LL
Sbjct: 318 LVCKVADFGLGRL-IEDNEYTARQ-GAKFPIKWTAPEAALY---GRFTIKSDVWSFGILL 372
Query: 85  WELATR-EVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDM 143
            EL T+  VP+  +   EV  +V   G R+  PP     L  L+  C  +DP +RPTF+ 
Sbjct: 373 TELTTKGRVPYPGMVNREVLDQVE-RGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEY 431
Query: 144 VLPILD 149
           +   L+
Sbjct: 432 LQAFLE 437

>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase Mst4 In Complex With An Quinazolin Length = 301

Iteration: 1
 Score = 50.4 bits (119), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 42/90 (46%), Gaps = 12/90 (13%)
Query: 55  PAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRIT 114
           P WM+PE +Q+   D      D+WS  +   ELA  E P +D+ PM V   +        
Sbjct: 184 PFWMAPEVIQQSAYDSK---ADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPKNN---- 236
Query: 115 IPPGISSHLSK----LIRICMNEDPGKRPT 140
            PP +    +K     I  C+N+DP  RPT
Sbjct: 237 -PPTLVGDFTKSFKEFIDACLNKDPSFRPT 265

>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly Mutant) In Complex With N6-Benzyl Adp Length = 452

Iteration: 1
 Score = 50.1 bits (118), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 38/126 (30%), Positives = 63/126 (50%), Gaps = 7/126 (5%)
Query: 25  FCCQIDEDLTARINMADAQFSFQQRGRCYYPAWMSPEALQKKPGDRNLEACDMWSFAVLL 84
             C++ +   AR+ + D +++ +Q G  +   W +PEA       R     D+WSF +LL
Sbjct: 317 LVCKVADFGLARL-IEDNEYTARQ-GAKFPIKWTAPEAALY---GRFTIKSDVWSFGILL 371
Query: 85  WELATR-EVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDM 143
            EL T+  VP+  +   EV  +V   G R+  PP     L  L+  C  ++P +RPTF+ 
Sbjct: 372 TELTTKGRVPYPGMVNREVLDQVE-RGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEY 430
Query: 144 VLPILD 149
           +   L+
Sbjct: 431 LQAFLE 436

>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An Inhibitor Length = 452

Iteration: 1
 Score = 50.1 bits (118), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 38/126 (30%), Positives = 63/126 (50%), Gaps = 7/126 (5%)
Query: 25  FCCQIDEDLTARINMADAQFSFQQRGRCYYPAWMSPEALQKKPGDRNLEACDMWSFAVLL 84
             C++ +   AR+ + D +++ +Q G  +   W +PEA       R     D+WSF +LL
Sbjct: 317 LVCKVADFGLARL-IEDNEYTARQ-GAKFPIKWTAPEAALY---GRFTIKSDVWSFGILL 371
Query: 85  WELATR-EVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDM 143
            EL T+  VP+  +   EV  +V   G R+  PP     L  L+  C  ++P +RPTF+ 
Sbjct: 372 TELTTKGRVPYPGMVNREVLDQVE-RGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEY 430
Query: 144 VLPILD 149
           +   L+
Sbjct: 431 LQAFLE 436

>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r In Complex With Dasatinib Length = 265

Iteration: 1
 Score = 50.1 bits (118), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 33/105 (31%), Positives = 53/105 (50%), Gaps = 6/105 (5%)
Query: 49  RGRCYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWELAT-REVPFADLTPMEVGMKVA 107
           RG  +   W  PE L      +     D+W+F VL+WE+ +  ++P+   T  E    +A
Sbjct: 164 RGSKFPVRWSPPEVLMY---SKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIA 220
Query: 108 LEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLP-ILDKM 151
            +GLR+  P   S  +  ++  C +E   +RPTF ++L  ILD M
Sbjct: 221 -QGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVM 264

>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src Length = 452

Iteration: 1
 Score = 50.1 bits (118), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 38/126 (30%), Positives = 63/126 (50%), Gaps = 7/126 (5%)
Query: 25  FCCQIDEDLTARINMADAQFSFQQRGRCYYPAWMSPEALQKKPGDRNLEACDMWSFAVLL 84
             C++ +   AR+ + D +++ +Q G  +   W +PEA       R     D+WSF +LL
Sbjct: 317 LVCKVADFGLARL-IEDNEYTARQ-GAKFPIKWTAPEAALY---GRFTIKSDVWSFGILL 371
Query: 85  WELATR-EVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDM 143
            EL T+  VP+  +   EV  +V   G R+  PP     L  L+  C  ++P +RPTF+ 
Sbjct: 372 TELTTKGRVPYPGMVNREVLDQVE-RGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEY 430
Query: 144 VLPILD 149
           +   L+
Sbjct: 431 LQAFLE 436

>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor Length = 535

Iteration: 1
 Score = 49.7 bits (117), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 38/126 (30%), Positives = 63/126 (50%), Gaps = 7/126 (5%)
Query: 25  FCCQIDEDLTARINMADAQFSFQQRGRCYYPAWMSPEALQKKPGDRNLEACDMWSFAVLL 84
             C++ +   AR+ + D +++ +Q G  +   W +PEA       R     D+WSF +LL
Sbjct: 400 LVCKVADFGLARL-IEDNEYTARQ-GAKFPIKWTAPEAALY---GRFTIKSDVWSFGILL 454
Query: 85  WELATR-EVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDM 143
            EL T+  VP+  +   EV  +V   G R+  PP     L  L+  C  ++P +RPTF+ 
Sbjct: 455 TELTTKGRVPYPGMVNREVLDQVE-RGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEY 513
Query: 144 VLPILD 149
           +   L+
Sbjct: 514 LQAFLE 519

>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Cgp77675 Length = 283

Iteration: 1
 Score = 49.7 bits (117), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 38/126 (30%), Positives = 63/126 (50%), Gaps = 7/126 (5%)
Query: 25  FCCQIDEDLTARINMADAQFSFQQRGRCYYPAWMSPEALQKKPGDRNLEACDMWSFAVLL 84
             C++ +   AR+ + D +++ +Q G  +   W +PEA       R     D+WSF +LL
Sbjct: 148 LVCKVADFGLARL-IEDNEYTARQ-GAKFPIKWTAPEAALY---GRFTIKSDVWSFGILL 202
Query: 85  WELATR-EVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDM 143
            EL T+  VP+  +   EV  +V   G R+  PP     L  L+  C  ++P +RPTF+ 
Sbjct: 203 TELTTKGRVPYPGMVNREVLDQVE-RGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEY 261
Query: 144 VLPILD 149
           +   L+
Sbjct: 262 LQAFLE 267

>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451 Length = 279

Iteration: 1
 Score = 49.7 bits (117), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 38/126 (30%), Positives = 63/126 (50%), Gaps = 7/126 (5%)
Query: 25  FCCQIDEDLTARINMADAQFSFQQRGRCYYPAWMSPEALQKKPGDRNLEACDMWSFAVLL 84
             C++ +   AR+ + D +++ +Q G  +   W +PEA       R     D+WSF +LL
Sbjct: 144 LVCKVADFGLARL-IEDNEYTARQ-GAKFPIKWTAPEAALY---GRFTIKSDVWSFGILL 198
Query: 85  WELATR-EVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDM 143
            EL T+  VP+  +   EV  +V   G R+  PP     L  L+  C  ++P +RPTF+ 
Sbjct: 199 TELTTKGRVPYPGMVNREVLDQVE-RGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEY 257
Query: 144 VLPILD 149
           +   L+
Sbjct: 258 LQAFLE 263

>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib Length = 336

Iteration: 1
 Score = 49.7 bits (117), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 27/95 (28%), Positives = 50/95 (52%), Gaps = 4/95 (4%)
Query: 57  WMSPEALQKKPGDRNLEACDMWSFAVLLWEL-ATREVPFADLTPMEVGMKVALEGLRITI 115
           WM+PE++         E+ D+WS+ + LWEL +    P+  +       K+  EG R+  
Sbjct: 236 WMAPESIFN--CVYTFES-DVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLS 292
Query: 116 PPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDK 150
           P    + +  +++ C + DP KRPTF  ++ +++K
Sbjct: 293 PEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEK 327

>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase Itk Catalytic Domain With Thienopyrazolylindole Inhibitor 090 Length = 266

Iteration: 1
 Score = 49.3 bits (116), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 29/96 (30%), Positives = 49/96 (51%), Gaps = 5/96 (5%)
Query: 57  WMSPEALQKKPGDRNLEACDMWSFAVLLWELATR-EVPFADLTPMEVGMKVALEGLRITI 115
           W SPE        R     D+WSF VL+WE+ +  ++P+ + +  EV   ++  G R+  
Sbjct: 170 WASPEVFSFS---RYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDIST-GFRLYK 225
Query: 116 PPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKM 151
           P   S+H+ +++  C  E P  RP F  +L  L ++
Sbjct: 226 PRLASTHVYQIMNHCWKERPEDRPAFSRLLRQLAEI 261

>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib Length = 336

Iteration: 1
 Score = 49.3 bits (116), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 27/95 (28%), Positives = 50/95 (52%), Gaps = 4/95 (4%)
Query: 57  WMSPEALQKKPGDRNLEACDMWSFAVLLWEL-ATREVPFADLTPMEVGMKVALEGLRITI 115
           WM+PE++         E+ D+WS+ + LWEL +    P+  +       K+  EG R+  
Sbjct: 236 WMAPESIFN--CVYTFES-DVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLS 292
Query: 116 PPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDK 150
           P    + +  +++ C + DP KRPTF  ++ +++K
Sbjct: 293 PEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEK 327

>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571 Inhibition Of C-kit Tyrosine Kinase Length = 313

Iteration: 1
 Score = 49.3 bits (116), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 29/108 (26%), Positives = 55/108 (50%), Gaps = 5/108 (4%)
Query: 45  SFQQRGRCYYPA-WMSPEALQKKPGDRNLEACDMWSFAVLLWEL-ATREVPFADLTPMEV 102
           ++  +G    P  WM+PE++         E+ D+WS+ + LWEL +    P+  +     
Sbjct: 200 NYVVKGNARLPVKWMAPESIFNCV--YTFES-DVWSYGIFLWELFSLGSSPYPGMPVDSK 256
Query: 103 GMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDK 150
             K+  EG R+  P    + +  +++ C + DP KRPTF  ++ +++K
Sbjct: 257 FYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEK 304

>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571 Inhibition Of C- Kit Tyrosine Kinase Length = 331

Iteration: 1
 Score = 49.3 bits (116), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 29/108 (26%), Positives = 55/108 (50%), Gaps = 5/108 (4%)
Query: 45  SFQQRGRCYYPA-WMSPEALQKKPGDRNLEACDMWSFAVLLWEL-ATREVPFADLTPMEV 102
           ++  +G    P  WM+PE++         E+ D+WS+ + LWEL +    P+  +     
Sbjct: 218 NYVVKGNARLPVKWMAPESIFNCV--YTFES-DVWSYGIFLWELFSLGSSPYPGMPVDSK 274
Query: 103 GMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDK 150
             K+  EG R+  P    + +  +++ C + DP KRPTF  ++ +++K
Sbjct: 275 FYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEK 322

>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52 Length = 269

Iteration: 1
 Score = 49.3 bits (116), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 29/96 (30%), Positives = 49/96 (51%), Gaps = 5/96 (5%)
Query: 57  WMSPEALQKKPGDRNLEACDMWSFAVLLWELATR-EVPFADLTPMEVGMKVALEGLRITI 115
           W SPE        R     D+WSF VL+WE+ +  ++P+ + +  EV   ++  G R+  
Sbjct: 173 WASPEVFSFS---RYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDIST-GFRLYK 228
Query: 116 PPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKM 151
           P   S+H+ +++  C  E P  RP F  +L  L ++
Sbjct: 229 PRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEI 264

>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib Length = 266

Iteration: 1
 Score = 49.3 bits (116), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 28/90 (31%), Positives = 46/90 (51%), Gaps = 5/90 (5%)
Query: 57  WMSPEALQKKPGDRNLEACDMWSFAVLLWELATR-EVPFADLTPMEVGMKVALEGLRITI 115
           W SPE        R     D+WSF VL+WE+ +  ++P+ + +  EV   ++  G R+  
Sbjct: 170 WASPEVFSFS---RYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDIST-GFRLYK 225
Query: 116 PPGISSHLSKLIRICMNEDPGKRPTFDMVL 145
           P   S+H+ +++  C  E P  RP F  +L
Sbjct: 226 PRLASTHVYQIMNHCWKERPEDRPAFSRLL 255

>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2 Tyrosine Kinase Catalytic Domain Length = 264

Iteration: 1
 Score = 49.3 bits (116), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 28/90 (31%), Positives = 46/90 (51%), Gaps = 5/90 (5%)
Query: 57  WMSPEALQKKPGDRNLEACDMWSFAVLLWELATR-EVPFADLTPMEVGMKVALEGLRITI 115
           W SPE        R     D+WSF VL+WE+ +  ++P+ + +  EV   ++  G R+  
Sbjct: 168 WASPEVFSFS---RYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDIST-GFRLYK 223
Query: 116 PPGISSHLSKLIRICMNEDPGKRPTFDMVL 145
           P   S+H+ +++  C  E P  RP F  +L
Sbjct: 224 PRLASTHVYQIMNHCWKERPEDRPAFSRLL 253

>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex Length = 329

Iteration: 1
 Score = 49.3 bits (116), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 29/108 (26%), Positives = 55/108 (50%), Gaps = 5/108 (4%)
Query: 45  SFQQRGRCYYPA-WMSPEALQKKPGDRNLEACDMWSFAVLLWEL-ATREVPFADLTPMEV 102
           ++  +G    P  WM+PE++         E+ D+WS+ + LWEL +    P+  +     
Sbjct: 216 NYVVKGNARLPVKWMAPESIFNCV--YTFES-DVWSYGIFLWELFSLGSSPYPGMPVDSK 272
Query: 103 GMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDK 150
             K+  EG R+  P    + +  +++ C + DP KRPTF  ++ +++K
Sbjct: 273 FYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEK 320

>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed With Imidazo[1,5-A]quinoxaline Length = 267

Iteration: 1
 Score = 49.3 bits (116), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 29/96 (30%), Positives = 49/96 (51%), Gaps = 5/96 (5%)
Query: 57  WMSPEALQKKPGDRNLEACDMWSFAVLLWELATR-EVPFADLTPMEVGMKVALEGLRITI 115
           W SPE        R     D+WSF VL+WE+ +  ++P+ + +  EV   ++  G R+  
Sbjct: 171 WASPEVFSFS---RYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDIST-GFRLYK 226
Query: 116 PPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKM 151
           P   S+H+ +++  C  E P  RP F  +L  L ++
Sbjct: 227 PRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEI 262

>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor Length = 286

Iteration: 1
 Score = 49.3 bits (116), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 28/90 (31%), Positives = 46/90 (51%), Gaps = 5/90 (5%)
Query: 57  WMSPEALQKKPGDRNLEACDMWSFAVLLWELATR-EVPFADLTPMEVGMKVALEGLRITI 115
           W SPE        R     D+WSF VL+WE+ +  ++P+ + +  EV   ++  G R+  
Sbjct: 190 WASPEVFSFS---RYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDIST-GFRLYK 245
Query: 116 PPGISSHLSKLIRICMNEDPGKRPTFDMVL 145
           P   S+H+ +++  C  E P  RP F  +L
Sbjct: 246 PRLASTHVYQIMNHCWKERPEDRPAFSRLL 275

>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs Length = 286

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 39/126 (30%), Positives = 62/126 (49%), Gaps = 7/126 (5%)
Query: 25  FCCQIDEDLTARINMADAQFSFQQRGRCYYPAWMSPEALQKKPGDRNLEACDMWSFAVLL 84
             C++ +   AR+ + D + + +Q G  +   W +PEA       R     D+WSF +LL
Sbjct: 151 LVCKVADFGLARL-IEDNEXTARQ-GAKFPIKWTAPEAALY---GRFTIKSDVWSFGILL 205
Query: 85  WELATR-EVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDM 143
            EL T+  VP+  +   EV  +V   G R+  PP     L  L+  C  +DP +RPTF+ 
Sbjct: 206 TELTTKGRVPYPGMVNREVLDQVE-RGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEY 264
Query: 144 VLPILD 149
           +   L+
Sbjct: 265 LQAFLE 270

>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase 1) Length = 294

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 42/90 (46%), Gaps = 12/90 (13%)
Query: 55  PAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRIT 114
           P WM+PE +++   D      D+WS  +   ELA  E P +DL PM V   +        
Sbjct: 180 PFWMAPEVIKQSAYDFK---ADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPKNS---- 232
Query: 115 IPPGISSHLSK----LIRICMNEDPGKRPT 140
            PP +    SK     +  C+N+DP  RPT
Sbjct: 233 -PPTLEGQHSKPFKEFVEACLNKDPRFRPT 261

>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta Length = 294

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 28/90 (31%), Positives = 44/90 (48%), Gaps = 12/90 (13%)
Query: 55  PAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRIT 114
           P WM+PE +++   D      D+WS  +   ELA  E P ++L PM+V   +        
Sbjct: 188 PFWMAPEVIKQSAYDSK---ADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNN---- 240
Query: 115 IPPGISSHLSK----LIRICMNEDPGKRPT 140
            PP +  + SK     +  C+N++P  RPT
Sbjct: 241 -PPTLEGNYSKPLKEFVEACLNKEPSFRPT 269

>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With 2-Isopropyl-7- (4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3- Ylamino)-2h- Phthalazin-1-One Length = 274

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 50/97 (51%), Gaps = 6/97 (6%)
Query: 57  WMSPEALQKKPGDRNLEACDMWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITI 115
           W  PE L      +     D+W+F VL+WE+ +  ++P+   T  E    +A +GLR+  
Sbjct: 178 WSPPEVLMY---SKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIA-QGLRLYR 233
Query: 116 PPGISSHLSKLIRICMNEDPGKRPTFDMVLP-ILDKM 151
           P   S  +  ++  C +E   +RPTF ++L  ILD M
Sbjct: 234 PHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVM 270

>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain Length = 263

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 49/97 (50%), Gaps = 6/97 (6%)
Query: 57  WMSPEALQKKPGDRNLEACDMWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITI 115
           W  PE L            D+W+F VL+WE+ +  ++P+   T  E    +A +GLR+  
Sbjct: 167 WSPPEVLMYSKFSSK---SDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIA-QGLRLYR 222
Query: 116 PPGISSHLSKLIRICMNEDPGKRPTFDMVLP-ILDKM 151
           P   S  +  ++  C +E   +RPTF ++L  ILD M
Sbjct: 223 PHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVM 259

>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex With Inhibitor Cgi1746 Length = 271

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 50/97 (51%), Gaps = 6/97 (6%)
Query: 57  WMSPEALQKKPGDRNLEACDMWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITI 115
           W  PE L      +     D+W+F VL+WE+ +  ++P+   T  E    +A +GLR+  
Sbjct: 172 WSPPEVLMY---SKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIA-QGLRLYR 227
Query: 116 PPGISSHLSKLIRICMNEDPGKRPTFDMVLP-ILDKM 151
           P   S  +  ++  C +E   +RPTF ++L  ILD M
Sbjct: 228 PHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVM 264

>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis- Anilino Pyrimidine Inhibitor Length = 276

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 36/131 (27%), Positives = 55/131 (41%), Gaps = 22/131 (16%)
Query: 29  IDEDLTAR---------INMADAQFSFQQRGRCYYPA--------WMSPEALQKKPGDRN 71
           +  D+ AR         + + D   S       YY A        WM+PE++  +   R 
Sbjct: 133 VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFR---RF 189
Query: 72  LEACDMWSFAVLLWELATREV-PFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRIC 130
             A D+W F V +WE+    V PF  +   +V  ++   G R+ +PP     L  L+  C
Sbjct: 190 TSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIE-NGERLPMPPNCPPTLYSLMTKC 248
Query: 131 MNEDPGKRPTF 141
              DP +RP F
Sbjct: 249 WAYDPSRRPRF 259

>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And Kinase Domains Of Focal Adhesion Kinase. Length = 276

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 36/131 (27%), Positives = 55/131 (41%), Gaps = 22/131 (16%)
Query: 29  IDEDLTAR---------INMADAQFSFQQRGRCYYPA--------WMSPEALQKKPGDRN 71
           +  D+ AR         + + D   S       YY A        WM+PE++  +   R 
Sbjct: 133 VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFR---RF 189
Query: 72  LEACDMWSFAVLLWELATREV-PFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRIC 130
             A D+W F V +WE+    V PF  +   +V  ++   G R+ +PP     L  L+  C
Sbjct: 190 TSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIE-NGERLPMPPNCPPTLYSLMTKC 248
Query: 131 MNEDPGKRPTF 141
              DP +RP F
Sbjct: 249 WAYDPSRRPRF 259

>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain Length = 267

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 50/97 (51%), Gaps = 6/97 (6%)
Query: 57  WMSPEALQKKPGDRNLEACDMWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITI 115
           W  PE L      +     D+W+F VL+WE+ +  ++P+   T  E    +A +GLR+  
Sbjct: 171 WSPPEVLMYS---KFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIA-QGLRLYR 226
Query: 116 PPGISSHLSKLIRICMNEDPGKRPTFDMVLP-ILDKM 151
           P   S  +  ++  C +E   +RPTF ++L  ILD M
Sbjct: 227 PHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVM 263

>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In Complex With Novel Allosteric Inhibitor Length = 304

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 36/131 (27%), Positives = 55/131 (41%), Gaps = 22/131 (16%)
Query: 29  IDEDLTAR---------INMADAQFSFQQRGRCYYPA--------WMSPEALQKKPGDRN 71
           +  D+ AR         + + D   S       YY A        WM+PE++  +   R 
Sbjct: 161 VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFR---RF 217
Query: 72  LEACDMWSFAVLLWELATREV-PFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRIC 130
             A D+W F V +WE+    V PF  +   +V  ++   G R+ +PP     L  L+  C
Sbjct: 218 TSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIE-NGERLPMPPNCPPTLYSLMTKC 276
Query: 131 MNEDPGKRPTF 141
              DP +RP F
Sbjct: 277 WAYDPSRRPRF 287

>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis- Anilino Pyrimidine Inhibitor Length = 276

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 36/131 (27%), Positives = 55/131 (41%), Gaps = 22/131 (16%)
Query: 29  IDEDLTAR---------INMADAQFSFQQRGRCYYPA--------WMSPEALQKKPGDRN 71
           +  D+ AR         + + D   S       YY A        WM+PE++  +   R 
Sbjct: 133 VHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFR---RF 189
Query: 72  LEACDMWSFAVLLWELATREV-PFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRIC 130
             A D+W F V +WE+    V PF  +   +V  ++   G R+ +PP     L  L+  C
Sbjct: 190 TSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIE-NGERLPMPPNCPPTLYSLMTKC 248
Query: 131 MNEDPGKRPTF 141
              DP +RP F
Sbjct: 249 WAYDPSRRPRF 259

>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine Kinase Bound To A Pyrrolopyrimidine-Containing Compound Length = 283

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 50/97 (51%), Gaps = 6/97 (6%)
Query: 57  WMSPEALQKKPGDRNLEACDMWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITI 115
           W  PE L      +     D+W+F VL+WE+ +  ++P+   T  E    +A +GLR+  
Sbjct: 187 WSPPEVLMY---SKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIA-QGLRLYR 242
Query: 116 PPGISSHLSKLIRICMNEDPGKRPTFDMVLP-ILDKM 151
           P   S  +  ++  C +E   +RPTF ++L  ILD M
Sbjct: 243 PHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVM 279

>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Pyrrolo[2,3- D]thiazole Length = 282

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 42/155 (27%), Positives = 68/155 (43%), Gaps = 28/155 (18%)
Query: 6   IVYSFYLNSKKSKTSNAFLFCCQ-IDEDLTAR---------INMADAQFSFQQRGRCYYP 55
           I+Y++ L+     T+ A+L   + +  D+ AR         + + D   S       YY 
Sbjct: 117 ILYAYQLS-----TALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYK 171
Query: 56  A--------WMSPEALQKKPGDRNLEACDMWSFAVLLWELATREV-PFADLTPMEVGMKV 106
           A        WM+PE++  +   R   A D+W F V +WE+    V PF  +   +V  ++
Sbjct: 172 ASKGKLPIKWMAPESINFR---RFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 228
Query: 107 ALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTF 141
              G R+ +PP     L  L+  C   DP +RP F
Sbjct: 229 E-NGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRF 262

>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) In Complex With Staurosporine Length = 304

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 12/95 (12%)
Query: 55  PAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRIT 114
           P WM+PE +++   D      D+WS  +   ELA  E P ++L PM+V   +        
Sbjct: 168 PFWMAPEVIKQSAYDSK---ADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNN---- 220
Query: 115 IPPGISSHLSK----LIRICMNEDPGKRPTFDMVL 145
            PP +  + SK     +  C+N++P  RPT   +L
Sbjct: 221 -PPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELL 254

>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) Length = 304

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 12/95 (12%)
Query: 55  PAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRIT 114
           P WM+PE +++   D      D+WS  +   ELA  E P ++L PM+V   +        
Sbjct: 168 PFWMAPEVIKQSAYDSK---ADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNN---- 220
Query: 115 IPPGISSHLSK----LIRICMNEDPGKRPTFDMVL 145
            PP +  + SK     +  C+N++P  RPT   +L
Sbjct: 221 -PPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELL 254

>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase Containing The Ferm And Kinase Domains Length = 656

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 42/155 (27%), Positives = 68/155 (43%), Gaps = 28/155 (18%)
Query: 6   IVYSFYLNSKKSKTSNAFLFCCQ-IDEDLTAR---------INMADAQFSFQQRGRCYYP 55
           I+Y++ L+     T+ A+L   + +  D+ AR         + + D   S       YY 
Sbjct: 494 ILYAYQLS-----TALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYK 548
Query: 56  A--------WMSPEALQKKPGDRNLEACDMWSFAVLLWELATREV-PFADLTPMEVGMKV 106
           A        WM+PE++  +   R   A D+W F V +WE+    V PF  +   +V  ++
Sbjct: 549 ASKGKLPIKWMAPESINFR---RFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 605
Query: 107 ALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTF 141
              G R+ +PP     L  L+  C   DP +RP F
Sbjct: 606 E-NGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRF 639

>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase Containing The Ferm And Kinase Domains. Length = 656

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 42/155 (27%), Positives = 68/155 (43%), Gaps = 28/155 (18%)
Query: 6   IVYSFYLNSKKSKTSNAFLFCCQ-IDEDLTAR---------INMADAQFSFQQRGRCYYP 55
           I+Y++ L+     T+ A+L   + +  D+ AR         + + D   S       YY 
Sbjct: 494 ILYAYQLS-----TALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYK 548
Query: 56  A--------WMSPEALQKKPGDRNLEACDMWSFAVLLWELATREV-PFADLTPMEVGMKV 106
           A        WM+PE++  +   R   A D+W F V +WE+    V PF  +   +V  ++
Sbjct: 549 ASKGKLPIKWMAPESINFR---RFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 605
Query: 107 ALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTF 141
              G R+ +PP     L  L+  C   DP +RP F
Sbjct: 606 E-NGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRF 639

>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative Length = 281

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 36/131 (27%), Positives = 55/131 (41%), Gaps = 22/131 (16%)
Query: 29  IDEDLTAR---------INMADAQFSFQQRGRCYYPA--------WMSPEALQKKPGDRN 71
           +  D+ AR         + + D   S       YY A        WM+PE++  +   R 
Sbjct: 135 VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFR---RF 191
Query: 72  LEACDMWSFAVLLWELATREV-PFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRIC 130
             A D+W F V +WE+    V PF  +   +V  ++   G R+ +PP     L  L+  C
Sbjct: 192 TSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIE-NGERLPMPPNCPPTLYSLMTKC 250
Query: 131 MNEDPGKRPTF 141
              DP +RP F
Sbjct: 251 WAYDPSRRPRF 261

>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase Length = 350

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/111 (28%), Positives = 54/111 (48%), Gaps = 9/111 (8%)
Query: 32  DLTARINMADAQFSFQQRGR----CYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWEL 87
           D    I +AD  F+ + +GR    C  P +++PE +  K  ++   A D W+  VL++E+
Sbjct: 175 DQQGYIKVADFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNK---AVDWWALGVLIYEM 231
Query: 88  ATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKR 138
           A    PF    P+++  K+     ++  P   SS L  L+R  +  D  KR
Sbjct: 232 AAGYPPFFADQPIQIYEKIV--SGKVRFPSHFSSDLKDLLRNLLQVDLTKR 280

>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak) Length = 281

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 36/131 (27%), Positives = 55/131 (41%), Gaps = 22/131 (16%)
Query: 29  IDEDLTAR---------INMADAQFSFQQRGRCYYPA--------WMSPEALQKKPGDRN 71
           +  D+ AR         + + D   S       YY A        WM+PE++  +   R 
Sbjct: 138 VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFR---RF 194
Query: 72  LEACDMWSFAVLLWELATREV-PFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRIC 130
             A D+W F V +WE+    V PF  +   +V  ++   G R+ +PP     L  L+  C
Sbjct: 195 TSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIE-NGERLPMPPNCPPTLYSLMTKC 253
Query: 131 MNEDPGKRPTF 141
              DP +RP F
Sbjct: 254 WAYDPSRRPRF 264

>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain Length = 283

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 38/126 (30%), Positives = 63/126 (50%), Gaps = 7/126 (5%)
Query: 25  FCCQIDEDLTARINMADAQFSFQQRGRCYYPAWMSPEALQKKPGDRNLEACDMWSFAVLL 84
             C++ +   AR+ + D +++ +Q G  +   W +PEA       R     D+WSF +LL
Sbjct: 148 LVCKVADFGLARL-IEDNEWTARQ-GAKFPIKWTAPEAALY---GRFTIKSDVWSFGILL 202
Query: 85  WELATR-EVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDM 143
            EL T+  VP+  +   EV  +V   G R+  PP     L  L+  C  ++P +RPTF+ 
Sbjct: 203 TELTTKGRVPYPGMVNREVLDQVE-RGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEY 261
Query: 144 VLPILD 149
           +   L+
Sbjct: 262 LQAFLE 267

>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A Methanesulfonamide Diaminopyrimidine Inhibitor Length = 276

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 36/131 (27%), Positives = 55/131 (41%), Gaps = 22/131 (16%)
Query: 29  IDEDLTAR---------INMADAQFSFQQRGRCYYPA--------WMSPEALQKKPGDRN 71
           +  D+ AR         + + D   S       YY A        WM+PE++  +   R 
Sbjct: 130 VHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFR---RF 186
Query: 72  LEACDMWSFAVLLWELATREV-PFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRIC 130
             A D+W F V +WE+    V PF  +   +V  ++   G R+ +PP     L  L+  C
Sbjct: 187 TSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIE-NGERLPMPPNCPPTLYSLMTKC 245
Query: 131 MNEDPGKRPTF 141
              DP +RP F
Sbjct: 246 WAYDPSRRPRF 256

>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With Y- 27632 Length = 350

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/111 (28%), Positives = 54/111 (48%), Gaps = 9/111 (8%)
Query: 32  DLTARINMADAQFSFQQRGR----CYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWEL 87
           D    I +AD  F+ + +GR    C  P +++PE +  K  ++   A D W+  VL++E+
Sbjct: 175 DQQGYIKVADFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNK---AVDWWALGVLIYEM 231
Query: 88  ATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKR 138
           A    PF    P+++  K+     ++  P   SS L  L+R  +  D  KR
Sbjct: 232 AAGYPPFFADQPIQIYEKIV--SGKVRFPSHFSSDLKDLLRNLLQVDLTKR 280

>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632 Length = 350

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/111 (28%), Positives = 54/111 (48%), Gaps = 9/111 (8%)
Query: 32  DLTARINMADAQFSFQQRGR----CYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWEL 87
           D    I +AD  F+ + +GR    C  P +++PE +  K  ++   A D W+  VL++E+
Sbjct: 175 DQQGYIKVADFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNK---AVDWWALGVLIYEM 231
Query: 88  ATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKR 138
           A    PF    P+++  K+     ++  P   SS L  L+R  +  D  KR
Sbjct: 232 AAGYPPFFADQPIQIYEKIV--SGKVRFPSHFSSDLKDLLRNLLQVDLTKR 280

>pdb|3A7F|A Chain A, Human Mst3 Kinase Length = 303

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 12/95 (12%)
Query: 55  PAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRIT 114
           P WM+PE +++   D      D+WS  +   ELA  E P ++L PM+V   +        
Sbjct: 183 PFWMAPEVIKQSAYDSK---ADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNN---- 235
Query: 115 IPPGISSHLSK----LIRICMNEDPGKRPTFDMVL 145
            PP +  + SK     +  C+N++P  RPT   +L
Sbjct: 236 -PPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELL 269

>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With Inhibitor Jnj- 7706621 Length = 351

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/111 (28%), Positives = 54/111 (48%), Gaps = 9/111 (8%)
Query: 32  DLTARINMADAQFSFQQRGR----CYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWEL 87
           D    I +AD  F+ + +GR    C  P +++PE +  K  ++   A D W+  VL++E+
Sbjct: 176 DQQGYIKVADFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNK---AVDWWALGVLIYEM 232
Query: 88  ATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKR 138
           A    PF    P+++  K+     ++  P   SS L  L+R  +  D  KR
Sbjct: 233 AAGYPPFFADQPIQIYEKIV--SGKVRFPSHFSSDLKDLLRNLLQVDLTKR 281

>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And Inactive Conformations Suggests A Mechanism Of Activation For Tec Family Kinases Length = 283

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 50/97 (51%), Gaps = 6/97 (6%)
Query: 57  WMSPEALQKKPGDRNLEACDMWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITI 115
           W  PE L      +     D+W+F VL+WE+ +  ++P+   T  E    +A +GLR+  
Sbjct: 187 WSPPEVLMY---SKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIA-QGLRLYR 242
Query: 116 PPGISSHLSKLIRICMNEDPGKRPTFDMVLP-ILDKM 151
           P   S  +  ++  C +E   +RPTF ++L  ILD M
Sbjct: 243 PHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVM 279

>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 (rsk2) Length = 342

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 36/123 (29%), Positives = 59/123 (47%), Gaps = 19/123 (15%)
Query: 37  INMADAQFSFQQRGR-------CYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWELAT 89
           I + D  F+ Q R         CY   +++PE L+++  D    ACD+WS  VLL+ + T
Sbjct: 159 IRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLERQGYD---AACDIWSLGVLLYTMLT 215
Query: 90  REVPFA---DLTPMEVGMKVALEGLRITIPPG----ISSHLSKLIRICMNEDPGKRPTFD 142
              PFA   D TP E+  ++     + ++  G    +S     L+   ++ DP +R T  
Sbjct: 216 GYTPFANGPDDTPEEILARIG--SGKFSLSGGYWNSVSDTAKDLVSKMLHVDPHQRLTAA 273
Query: 143 MVL 145
           +VL
Sbjct: 274 LVL 276

>pdb|3A4O|X Chain X, Lyn Kinase Domain Length = 286

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 35/124 (28%), Positives = 67/124 (54%), Gaps = 7/124 (5%)
Query: 27  CQIDEDLTARINMADAQFSFQQRGRCYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWE 86
           C+I +   AR+ + D +++ ++ G  +   W +PEA+    G   +++ D+WSF +LL+E
Sbjct: 149 CKIADFGLARV-IEDNEYTARE-GAKFPIKWTAPEAINF--GCFTIKS-DVWSFGILLYE 203
Query: 87  LATR-EVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVL 145
           + T  ++P+   T  +V M    +G R+         L  ++++C  E   +RPTFD + 
Sbjct: 204 IVTYGKIPYPGRTNADV-MTALSQGYRMPRVENCPDELYDIMKMCWKEKAEERPTFDYLQ 262
Query: 146 PILD 149
            +LD
Sbjct: 263 SVLD 266

>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family- Selective Tyrosine Kinase Inhibitor Length = 454

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/126 (26%), Positives = 65/126 (51%), Gaps = 7/126 (5%)
Query: 25  FCCQIDEDLTARINMADAQFSFQQRGRCYYPAWMSPEALQKKPGDRNLEACDMWSFAVLL 84
             C+I +   AR+ + D +++ ++ G  +   W +PEA+    G   +++ D+WSF +LL
Sbjct: 321 LVCKIADFGLARV-IEDNEYTARE-GAKFPIKWTAPEAINF--GSFTIKS-DVWSFGILL 375
Query: 85  WELATR-EVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDM 143
            E+ T   +P+  ++  EV ++    G R+  P      L  ++  C    P +RPTF+ 
Sbjct: 376 MEIVTYGRIPYPGMSNPEV-IRALERGYRMPRPENCPEELYNIMMRCWKNRPEERPTFEY 434
Query: 144 VLPILD 149
           +  +LD
Sbjct: 435 IQSVLD 440

>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 28/96 (29%), Positives = 50/96 (52%), Gaps = 5/96 (5%)
Query: 57  WMSPEALQKKPGDRNLEACDMWSFAVLLWELATREV-PFADLTPMEVGMKVALEGLRITI 115
           W +PE+L     ++     D+W+F VLLWE+AT  + P+  + P +V  ++  +  R+  
Sbjct: 176 WTAPESLAY---NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQV-YELLEKDYRMER 231
Query: 116 PPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKM 151
           P G    + +L+R C   +P  RP+F  +    + M
Sbjct: 232 PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 267

>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg- 1009247 Length = 270

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/126 (26%), Positives = 65/126 (51%), Gaps = 7/126 (5%)
Query: 25  FCCQIDEDLTARINMADAQFSFQQRGRCYYPAWMSPEALQKKPGDRNLEACDMWSFAVLL 84
             C+I +   AR+ + D +++ ++ G  +   W +PEA+    G   +++ D+WSF +LL
Sbjct: 148 LVCKIADFGLARV-IEDNEYTARE-GAKFPIKWTAPEAINF--GSFTIKS-DVWSFGILL 202
Query: 85  WELATR-EVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDM 143
            E+ T   +P+  ++  EV ++    G R+  P      L  ++  C    P +RPTF+ 
Sbjct: 203 MEIVTYGRIPYPGMSNPEV-IRALERGYRMPRPENCPEELYNIMMRCWKNRPEERPTFEY 261
Query: 144 VLPILD 149
           +  +LD
Sbjct: 262 IQSVLD 267

>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 277

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 28/96 (29%), Positives = 50/96 (52%), Gaps = 5/96 (5%)
Query: 57  WMSPEALQKKPGDRNLEACDMWSFAVLLWELATREV-PFADLTPMEVGMKVALEGLRITI 115
           W +PE+L     ++     D+W+F VLLWE+AT  + P+  + P +V  ++  +  R+  
Sbjct: 176 WTAPESLAY---NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQV-YELLEKDYRMER 231
Query: 116 PPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKM 151
           P G    + +L+R C   +P  RP+F  +    + M
Sbjct: 232 PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 267

>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights Into Receptor Autoregulation Length = 343

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 16/151 (10%)
Query: 11  YLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQRGRCYYPA---------WMSPE 61
           YL+ +K    +     C + E++  +I  AD   S       YY A         WM PE
Sbjct: 189 YLSERKFVHRDLATRNCLVGENMVVKI--ADFGLSRNIYSADYYKADGNDAIPIRWMPPE 246
Query: 62  ALQKKPGDRNLEACDMWSFAVLLWELATREV-PFADLTPMEVGMKVALEGLRITIPPGIS 120
           ++     +R     D+W++ V+LWE+ +  + P+  +   EV   V  +G  +  P    
Sbjct: 247 SIFY---NRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVR-DGNILACPENCP 302
Query: 121 SHLSKLIRICMNEDPGKRPTFDMVLPILDKM 151
             L  L+R+C ++ P  RP+F  +  IL +M
Sbjct: 303 LELYNLMRLCWSKLPADRPSFCSIHRILQRM 333

>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex With Small Molecule Fragment Length = 293

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 28/96 (29%), Positives = 50/96 (52%), Gaps = 5/96 (5%)
Query: 57  WMSPEALQKKPGDRNLEACDMWSFAVLLWELATREV-PFADLTPMEVGMKVALEGLRITI 115
           W +PE+L     ++     D+W+F VLLWE+AT  + P+  + P +V  ++  +  R+  
Sbjct: 176 WTAPESLAY---NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQV-YELLEKDYRMER 231
Query: 116 PPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKM 151
           P G    + +L+R C   +P  RP+F  +    + M
Sbjct: 232 PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 267

>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex Length = 438

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/109 (28%), Positives = 54/109 (49%), Gaps = 5/109 (4%)
Query: 42  AQFSFQQRGRCYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATR-EVPFADLTPM 100
           A F   + G  +   W +PEA+    G   +++ D+WSF +LL E+ T   +P+  ++  
Sbjct: 320 ADFGLARVGAKFPIKWTAPEAINF--GSFTIKS-DVWSFGILLMEIVTYGRIPYPGMSNP 376
Query: 101 EVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILD 149
           EV ++    G R+  P      L  ++  C    P +RPTF+ +  +LD
Sbjct: 377 EV-IRALERGYRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLD 424

>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7 Length = 310

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/106 (32%), Positives = 51/106 (48%), Gaps = 19/106 (17%)
Query: 55  PAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGL--- 111
           P +MSPE + +     N ++ D+WS   LL+E+A  + PF        G K+ L  L   
Sbjct: 200 PYYMSPERIHE--NGYNFKS-DIWSLGCLLYEMAALQSPF-------YGDKMNLYSLCKK 249
Query: 112 --RITIPPGISSHLS----KLIRICMNEDPGKRPTFDMVLPILDKM 151
             +   PP  S H S    +L+ +C+N DP KRP    V  +  +M
Sbjct: 250 IEQCDYPPLPSDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRM 295

>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With Staurosporine Length = 283

Iteration: 1
 Score = 47.8 bits (112), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 39/126 (30%), Positives = 62/126 (49%), Gaps = 7/126 (5%)
Query: 25  FCCQIDEDLTARINMADAQFSFQQRGRCYYPAWMSPEALQKKPGDRNLEACDMWSFAVLL 84
             C+I +   AR+ + D + + +Q G  +   W +PEA       R     D+WSF +LL
Sbjct: 142 LICKIADFGLARL-IEDNEXTARQ-GAKFPIKWTAPEAALY---GRFTIKSDVWSFGILL 196
Query: 85  WELATR-EVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDM 143
            EL T+  VP+  +   EV  +V   G R+  P      L +L+  C  +DP +RPTF+ 
Sbjct: 197 TELVTKGRVPYPGMNNREVLEQVE-RGYRMPCPQDCPISLHELMIHCWKKDPEERPTFEY 255
Query: 144 VLPILD 149
           +   L+
Sbjct: 256 LQSFLE 261

>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The Kinase Domain Of Focal Adhesion Kinase With A Phosphorylated Activation Loop Length = 276

Iteration: 1
 Score = 47.8 bits (112), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 28/86 (32%), Positives = 43/86 (50%), Gaps = 5/86 (5%)
Query: 57  WMSPEALQKKPGDRNLEACDMWSFAVLLWELATREV-PFADLTPMEVGMKVALEGLRITI 115
           WM+PE++  +   R   A D+W F V +WE+    V PF  +   +V  ++   G R+ +
Sbjct: 178 WMAPESINFR---RFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIE-NGERLPM 233
Query: 116 PPGISSHLSKLIRICMNEDPGKRPTF 141
           PP     L  L+  C   DP +RP F
Sbjct: 234 PPNCPPTLYSLMTKCWAYDPSRRPRF 259

>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2: Se-Met Derivative Length = 342

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 36/123 (29%), Positives = 58/123 (47%), Gaps = 19/123 (15%)
Query: 37  INMADAQFSFQQRGR-------CYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWELAT 89
           I + D  F+ Q R         CY   +++PE L+++  D    ACD+WS  VLL+   T
Sbjct: 159 IRICDFGFAKQLRAENGLLXTPCYTANFVAPEVLERQGYD---AACDIWSLGVLLYTXLT 215
Query: 90  REVPFA---DLTPMEVGMKVALEGLRITIPPG----ISSHLSKLIRICMNEDPGKRPTFD 142
              PFA   D TP E+  ++     + ++  G    +S     L+   ++ DP +R T  
Sbjct: 216 GYTPFANGPDDTPEEILARIG--SGKFSLSGGYWNSVSDTAKDLVSKXLHVDPHQRLTAA 273
Query: 143 MVL 145
           +VL
Sbjct: 274 LVL 276

>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533) Length = 276

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 38/126 (30%), Positives = 62/126 (49%), Gaps = 7/126 (5%)
Query: 25  FCCQIDEDLTARINMADAQFSFQQRGRCYYPAWMSPEALQKKPGDRNLEACDMWSFAVLL 84
             C++ +   AR+ + D + + +Q G  +   W +PEA       R     D+WSF +LL
Sbjct: 141 LVCKVADFGLARL-IEDNEXTARQ-GAKFPIKWTAPEAALY---GRFTIKSDVWSFGILL 195
Query: 85  WELATR-EVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDM 143
            EL T+  VP+  +   EV  +V   G R+  PP     L  L+  C  ++P +RPTF+ 
Sbjct: 196 TELTTKGRVPYPGMVNREVLDQVE-RGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEY 254
Query: 144 VLPILD 149
           +   L+
Sbjct: 255 LQAFLE 260

>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors Length = 336

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/111 (28%), Positives = 53/111 (47%), Gaps = 9/111 (8%)
Query: 32  DLTARINMADAQFSFQQRGR----CYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWEL 87
           D    I + D  F+ + +GR    C  P +++PE +  K  ++   A D W+  VL++E+
Sbjct: 161 DQQGYIQVTDFGFAKRVKGRTWTLCGTPEYLAPEIILSKGYNK---AVDWWALGVLIYEM 217
Query: 88  ATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKR 138
           A    PF    P+++  K+    +R   P   SS L  L+R  +  D  KR
Sbjct: 218 AAGYPPFFADQPIQIYEKIVSGKVR--FPSHFSSDLKDLLRNLLQVDLTKR 266

>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2 Length = 343

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/111 (28%), Positives = 53/111 (47%), Gaps = 9/111 (8%)
Query: 32  DLTARINMADAQFSFQQRGR----CYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWEL 87
           D    I + D  F+ + +GR    C  P +++PE +  K  ++   A D W+  VL++E+
Sbjct: 168 DQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNK---AVDWWALGVLIYEM 224
Query: 88  ATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKR 138
           A    PF    P+++  K+    +R   P   SS L  L+R  +  D  KR
Sbjct: 225 AAGYPPFFADQPIQIYEKIVSGKVR--FPSHFSSDLKDLLRNLLQVDLTKR 273

>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit Calpha 2 Length = 343

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/111 (27%), Positives = 53/111 (47%), Gaps = 9/111 (8%)
Query: 32  DLTARINMADAQFSFQQRGR----CYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWEL 87
           D    I + D  F+ + +GR    C  P +++PE +  K  ++   A D W+  VL++E+
Sbjct: 168 DQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNK---AVDWWALGVLIYEM 224
Query: 88  ATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKR 138
           A    PF    P+++  K+     ++  P   SS L  L+R  +  D  KR
Sbjct: 225 AAGYPPFFADQPIQIYEKIV--SGKVRFPSHFSSDLKDLLRNLLQVDLTKR 273

>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of Camp-Dependent Protein Kinase Length = 345

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/111 (27%), Positives = 53/111 (47%), Gaps = 9/111 (8%)
Query: 32  DLTARINMADAQFSFQQRGR----CYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWEL 87
           D    I + D  F+ + +GR    C  P +++PE +  K  ++   A D W+  VL++E+
Sbjct: 170 DQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNK---AVDWWALGVLIYEM 226
Query: 88  ATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKR 138
           A    PF    P+++  K+     ++  P   SS L  L+R  +  D  KR
Sbjct: 227 AAGYPPFFADQPIQIYEKIV--SGKVRFPSHFSSDLKDLLRNLLQVDLTKR 275

>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 47.4 bits (111), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 31/111 (27%), Positives = 53/111 (47%), Gaps = 9/111 (8%)
Query: 32  DLTARINMADAQFSFQQRGR----CYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWEL 87
           D    I + D  F+ + +GR    C  P +++PE +  K  ++   A D W+  VL++E+
Sbjct: 175 DQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNK---AVDWWALGVLIYEM 231
Query: 88  ATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKR 138
           A    PF    P+++  K+     ++  P   SS L  L+R  +  D  KR
Sbjct: 232 AAGYPPFFADQPIQIYEKIV--SGKVRFPSHFSSDLKDLLRNLLQVDLTKR 280

>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory Subunit Of Protein Kinase A That Represents The Inhibited State Length = 350

Iteration: 1
 Score = 47.4 bits (111), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 31/111 (27%), Positives = 53/111 (47%), Gaps = 9/111 (8%)
Query: 32  DLTARINMADAQFSFQQRGR----CYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWEL 87
           D    I + D  F+ + +GR    C  P +++PE +  K  ++   A D W+  VL++E+
Sbjct: 175 DQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNK---AVDWWALGVLIYEM 231
Query: 88  ATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKR 138
           A    PF    P+++  K+     ++  P   SS L  L+R  +  D  KR
Sbjct: 232 AAGYPPFFADQPIQIYEKIV--SGKVRFPSHFSSDLKDLLRNLLQVDLTKR 280

>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of Camp-Dependent Protein Kinase And Adenosine Further Defines Conformational Flexibility Length = 350

Iteration: 1
 Score = 47.4 bits (111), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 31/111 (27%), Positives = 53/111 (47%), Gaps = 9/111 (8%)
Query: 32  DLTARINMADAQFSFQQRGR----CYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWEL 87
           D    I + D  F+ + +GR    C  P +++PE +  K  ++   A D W+  VL++E+
Sbjct: 175 DQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNK---AVDWWALGVLIYEM 231
Query: 88  ATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKR 138
           A    PF    P+++  K+     ++  P   SS L  L+R  +  D  KR
Sbjct: 232 AAGYPPFFADQPIQIYEKIV--SGKVRFPSHFSSDLKDLLRNLLQVDLTKR 280

>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350

Iteration: 1
 Score = 47.4 bits (111), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 31/111 (27%), Positives = 53/111 (47%), Gaps = 9/111 (8%)
Query: 32  DLTARINMADAQFSFQQRGR----CYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWEL 87
           D    I + D  F+ + +GR    C  P +++PE +  K  ++   A D W+  VL++E+
Sbjct: 175 DQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNK---AVDWWALGVLIYEM 231
Query: 88  ATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKR 138
           A    PF    P+++  K+     ++  P   SS L  L+R  +  D  KR
Sbjct: 232 AAGYPPFFADQPIQIYEKIV--SGKVRFPSHFSSDLKDLLRNLLQVDLTKR 280

>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The Murine Receptor Tyrosine Kinase Tyro3 (Sky) Length = 323

Iteration: 1
 Score = 47.4 bits (111), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 39/143 (27%), Positives = 65/143 (45%), Gaps = 20/143 (13%)
Query: 11  YLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQRGRCYYPA---------WMSPE 61
           YL+S+     +     C + ED+T  + +AD   S +     YY           W++ E
Sbjct: 152 YLSSRNFIHRDLAARNCMLAEDMT--VCVADFGLSRKIYSGDYYRQGCASKLPVKWLALE 209
Query: 62  ALQKKPGDRNLEAC--DMWSFAVLLWELATR-EVPFADLTPMEVGMKVALEGLRITIPPG 118
           +L       NL     D+W+F V +WE+ TR + P+A +   E+     + G R+  PP 
Sbjct: 210 SLAD-----NLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEI-YNYLIGGNRLKQPPE 263
Query: 119 ISSHLSKLIRICMNEDPGKRPTF 141
               +  L+  C + DP +RP+F
Sbjct: 264 CMEEVYDLMYQCWSADPKQRPSF 286

>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With A Peptide Inhibitor And Detergent Length = 350

Iteration: 1
 Score = 47.4 bits (111), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 31/111 (27%), Positives = 53/111 (47%), Gaps = 9/111 (8%)
Query: 32  DLTARINMADAQFSFQQRGR----CYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWEL 87
           D    I + D  F+ + +GR    C  P +++PE +  K  ++   A D W+  VL++E+
Sbjct: 175 DQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNK---AVDWWALGVLIYEM 231
Query: 88  ATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKR 138
           A    PF    P+++  K+     ++  P   SS L  L+R  +  D  KR
Sbjct: 232 AAGYPPFFADQPIQIYEKIV--SGKVRFPSHFSSDLKDLLRNLLQVDLTKR 280

>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To Hydroxyfasudil Length = 351

Iteration: 1
 Score = 47.0 bits (110), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 32/111 (28%), Positives = 53/111 (47%), Gaps = 9/111 (8%)
Query: 32  DLTARINMADAQFSFQQRGR----CYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWEL 87
           D    I + D  F+ + +GR    C  P +++PE +  K  ++   A D W+  VL++E+
Sbjct: 176 DQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNK---AVDWWALGVLIYEM 232
Query: 88  ATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKR 138
           A    PF    P+++  K+    +R   P   SS L  L+R  +  D  KR
Sbjct: 233 AAGYPPFFADQPIQIYEKIVSGKVR--FPSHFSSDLKDLLRNLLQVDLTKR 281

>pdb|2F7E|E Chain E, Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6- Yl-Pyridin-3-Yloxymethyl-Etylamine Length = 351

Iteration: 1
 Score = 47.0 bits (110), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 31/111 (27%), Positives = 53/111 (47%), Gaps = 9/111 (8%)
Query: 32  DLTARINMADAQFSFQQRGR----CYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWEL 87
           D    I + D  F+ + +GR    C  P +++PE +  K  ++   A D W+  VL++E+
Sbjct: 176 DQQGYIQVTDFGFAKRVKGRTWTLCGTPEYLAPEIILSKGYNK---AVDWWALGVLIYEM 232
Query: 88  ATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKR 138
           A    PF    P+++  K+     ++  P   SS L  L+R  +  D  KR
Sbjct: 233 AAGYPPFFADQPIQIYEKIV--SGKVRFPSHFSSDLKDLLRNLLQVDLTKR 281

>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With Azepane Derivative 8 Length = 350

Iteration: 1
 Score = 47.0 bits (110), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 31/111 (27%), Positives = 53/111 (47%), Gaps = 9/111 (8%)
Query: 32  DLTARINMADAQFSFQQRGR----CYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWEL 87
           D    I + D  F+ + +GR    C  P +++PE +  K  ++   A D W+  VL++E+
Sbjct: 175 DQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNK---AVDWWALGVLIYEM 231
Query: 88  ATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKR 138
           A    PF    P+++  K+     ++  P   SS L  L+R  +  D  KR
Sbjct: 232 AAGYPPFFADQPIQIYEKIV--SGKVRFPSHFSSDLKDLLRNLLQVDLTKR 280

>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With The Peptide Inhibitor Pki(5-24) And Adenosine Length = 350

Iteration: 1
 Score = 47.0 bits (110), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 31/111 (27%), Positives = 53/111 (47%), Gaps = 9/111 (8%)
Query: 32  DLTARINMADAQFSFQQRGR----CYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWEL 87
           D    I + D  F+ + +GR    C  P +++PE +  K  ++   A D W+  VL++E+
Sbjct: 175 DQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNK---AVDWWALGVLIYEM 231
Query: 88  ATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKR 138
           A    PF    P+++  K+     ++  P   SS L  L+R  +  D  KR
Sbjct: 232 AAGYPPFFADQPIQIYEKIV--SGKVRFPSHFSSDLKDLLRNLLQVDLTKR 280

>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit Of Camp- Dependent Protein Kinase In Complex With Sp20 And Amp-Pnp Length = 350

Iteration: 1
 Score = 47.0 bits (110), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 32/111 (28%), Positives = 53/111 (47%), Gaps = 9/111 (8%)
Query: 32  DLTARINMADAQFSFQQRGR----CYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWEL 87
           D    I + D  F+ + +GR    C  P +++PE +  K  ++   A D W+  VL++E+
Sbjct: 175 DQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNK---AVDWWALGVLIYEM 231
Query: 88  ATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKR 138
           A    PF    P+++  K+    +R   P   SS L  L+R  +  D  KR
Sbjct: 232 AAGYPPFFADQPIQIYEKIVSGKVR--FPSHFSSDLKDLLRNLLQVDLTKR 280

>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit Of Camp- Dependent Protein Kinase Reveal Open And Closed Conformations Length = 350

Iteration: 1
 Score = 47.0 bits (110), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 31/111 (27%), Positives = 53/111 (47%), Gaps = 9/111 (8%)
Query: 32  DLTARINMADAQFSFQQRGR----CYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWEL 87
           D    I + D  F+ + +GR    C  P +++PE +  K  ++   A D W+  VL++E+
Sbjct: 175 DQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNK---AVDWWALGVLIYEM 231
Query: 88  ATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKR 138
           A    PF    P+++  K+     ++  P   SS L  L+R  +  D  KR
Sbjct: 232 AAGYPPFFADQPIQIYEKIV--SGKVRFPSHFSSDLKDLLRNLLQVDLTKR 280

>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And Potent Inhibitors For Akt: Synthesis And Sar Studies Length = 337

Iteration: 1
 Score = 47.0 bits (110), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 32/111 (28%), Positives = 53/111 (47%), Gaps = 9/111 (8%)
Query: 32  DLTARINMADAQFSFQQRGR----CYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWEL 87
           D    I + D  F+ + +GR    C  P +++PE +  K  ++   A D W+  VL++E+
Sbjct: 162 DEQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNK---AVDWWALGVLIYEM 218
Query: 88  ATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKR 138
           A    PF    P+++  K+    +R   P   SS L  L+R  +  D  KR
Sbjct: 219 AAGYPPFFADQPIQIYEKIVSGKVR--FPSHFSSDLKDLLRNLLQVDLTKR 267

>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077) Length = 350

Iteration: 1
 Score = 47.0 bits (110), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 31/111 (27%), Positives = 53/111 (47%), Gaps = 9/111 (8%)
Query: 32  DLTARINMADAQFSFQQRGR----CYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWEL 87
           D    I + D  F+ + +GR    C  P +++PE +  K  ++   A D W+  VL++E+
Sbjct: 175 DQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNK---AVDWWALGVLIYEM 231
Query: 88  ATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKR 138
           A    PF    P+++  K+     ++  P   SS L  L+R  +  D  KR
Sbjct: 232 AAGYPPFFADQPIQIYEKIV--SGKVRFPSHFSSDLKDLLRNLLQVDLTKR 280

>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With Staurosporine Length = 350

Iteration: 1
 Score = 47.0 bits (110), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 31/111 (27%), Positives = 53/111 (47%), Gaps = 9/111 (8%)
Query: 32  DLTARINMADAQFSFQQRGR----CYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWEL 87
           D    I + D  F+ + +GR    C  P +++PE +  K  ++   A D W+  VL++E+
Sbjct: 175 DQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNK---AVDWWALGVLIYEM 231
Query: 88  ATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKR 138
           A    PF    P+++  K+     ++  P   SS L  L+R  +  D  KR
Sbjct: 232 AAGYPPFFADQPIQIYEKIV--SGKVRFPSHFSSDLKDLLRNLLQVDLTKR 280

>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol Length = 351

Iteration: 1
 Score = 47.0 bits (110), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 31/111 (27%), Positives = 53/111 (47%), Gaps = 9/111 (8%)
Query: 32  DLTARINMADAQFSFQQRGR----CYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWEL 87
           D    I + D  F+ + +GR    C  P +++PE +  K  ++   A D W+  VL++E+
Sbjct: 176 DQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNK---AVDWWALGVLIYEM 232
Query: 88  ATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKR 138
           A    PF    P+++  K+     ++  P   SS L  L+R  +  D  KR
Sbjct: 233 AAGYPPFFADQPIQIYEKIV--SGKVRFPSHFSSDLKDLLRNLLQVDLTKR 281

>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With Pki-5-24 Length = 350

Iteration: 1
 Score = 47.0 bits (110), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 31/111 (27%), Positives = 53/111 (47%), Gaps = 9/111 (8%)
Query: 32  DLTARINMADAQFSFQQRGR----CYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWEL 87
           D    I + D  F+ + +GR    C  P +++PE +  K  ++   A D W+  VL++E+
Sbjct: 175 DQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNK---AVDWWALGVLIYEM 231
Query: 88  ATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKR 138
           A    PF    P+++  K+     ++  P   SS L  L+R  +  D  KR
Sbjct: 232 AAGYPPFFADQPIQIYEKIV--SGKVRFPSHFSSDLKDLLRNLLQVDLTKR 280

>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With A- 443654 Length = 351

Iteration: 1
 Score = 47.0 bits (110), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 31/111 (27%), Positives = 53/111 (47%), Gaps = 9/111 (8%)
Query: 32  DLTARINMADAQFSFQQRGR----CYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWEL 87
           D    I + D  F+ + +GR    C  P +++PE +  K  ++   A D W+  VL++E+
Sbjct: 176 DQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNK---AVDWWALGVLIYEM 232
Query: 88  ATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKR 138
           A    PF    P+++  K+     ++  P   SS L  L+R  +  D  KR
Sbjct: 233 AAGYPPFFADQPIQIYEKIV--SGKVRFPSHFSSDLKDLLRNLLQVDLTKR 281

>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With H89 Protein Kinase Inhibitor N-[2- (4-Bromocinnamylamino)ethyl]-5-Isoquinoline Length = 350

Iteration: 1
 Score = 47.0 bits (110), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 31/111 (27%), Positives = 53/111 (47%), Gaps = 9/111 (8%)
Query: 32  DLTARINMADAQFSFQQRGR----CYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWEL 87
           D    I + D  F+ + +GR    C  P +++PE +  K  ++   A D W+  VL++E+
Sbjct: 175 DQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNK---AVDWWALGVLIYEM 231
Query: 88  ATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKR 138
           A    PF    P+++  K+     ++  P   SS L  L+R  +  D  KR
Sbjct: 232 AAGYPPFFADQPIQIYEKIV--SGKVRFPSHFSSDLKDLLRNLLQVDLTKR 280

>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl)amide Length = 351

Iteration: 1
 Score = 47.0 bits (110), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 31/111 (27%), Positives = 53/111 (47%), Gaps = 9/111 (8%)
Query: 32  DLTARINMADAQFSFQQRGR----CYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWEL 87
           D    I + D  F+ + +GR    C  P +++PE +  K  ++   A D W+  VL++E+
Sbjct: 176 DQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNK---AVDWWALGVLIYEM 232
Query: 88  ATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKR 138
           A    PF    P+++  K+     ++  P   SS L  L+R  +  D  KR
Sbjct: 233 AAGYPPFFADQPIQIYEKIV--SGKVRFPSHFSSDLKDLLRNLLQVDLTKR 281

>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp- Dependent Protein Kinase Complexed With A Substrate Peptide, Adp And Detergent Length = 350

Iteration: 1
 Score = 47.0 bits (110), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 31/111 (27%), Positives = 53/111 (47%), Gaps = 9/111 (8%)
Query: 32  DLTARINMADAQFSFQQRGR----CYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWEL 87
           D    I + D  F+ + +GR    C  P +++PE +  K  ++   A D W+  VL++E+
Sbjct: 175 DQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNK---AVDWWALGVLIYEM 231
Query: 88  ATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKR 138
           A    PF    P+++  K+     ++  P   SS L  L+R  +  D  KR
Sbjct: 232 AAGYPPFFADEPIQIYEKIV--SGKVRFPSHFSSDLKDLLRNLLQVDLTKR 280

>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-1039 Length = 351

Iteration: 1
 Score = 47.0 bits (110), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 31/111 (27%), Positives = 53/111 (47%), Gaps = 9/111 (8%)
Query: 32  DLTARINMADAQFSFQQRGR----CYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWEL 87
           D    I + D  F+ + +GR    C  P +++PE +  K  ++   A D W+  VL++E+
Sbjct: 176 DQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNK---AVDWWALGVLIYEM 232
Query: 88  ATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKR 138
           A    PF    P+++  K+     ++  P   SS L  L+R  +  D  KR
Sbjct: 233 AAGYPPFFADQPIQIYEKIV--SGKVRFPSHFSSDLKDLLRNLLQVDLTKR 281

>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent Protein Kinase With Unphosphorylated Turn Motif Length = 371

Iteration: 1
 Score = 47.0 bits (110), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 32/111 (28%), Positives = 53/111 (47%), Gaps = 9/111 (8%)
Query: 32  DLTARINMADAQFSFQQRGR----CYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWEL 87
           D    I + D  F+ + +GR    C  P +++PE +  K  ++   A D W+  VL++E+
Sbjct: 196 DQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNK---AVDWWALGVLIYEM 252
Query: 88  ATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKR 138
           A    PF    P+++  K+    +R   P   SS L  L+R  +  D  KR
Sbjct: 253 AAGYPPFFADQPIQIYEKIVSGKVR--FPSHFSSDLKDLLRNLLQVDLTKR 301

>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp Length = 350

Iteration: 1
 Score = 47.0 bits (110), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 31/111 (27%), Positives = 53/111 (47%), Gaps = 9/111 (8%)
Query: 32  DLTARINMADAQFSFQQRGR----CYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWEL 87
           D    I + D  F+ + +GR    C  P +++PE +  K  ++   A D W+  VL++E+
Sbjct: 175 DQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNK---AVDWWALGVLIYEM 231
Query: 88  ATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKR 138
           A    PF    P+++  K+     ++  P   SS L  L+R  +  D  KR
Sbjct: 232 AAGYPPFFADQPIQIYEKIV--SGKVRFPSHFSSDLKDLLRNLLQVDLTKR 280

>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of Camp-Dependent Protein Kinase And An Inhibitor Peptide Displays An Open Conformation Length = 350

Iteration: 1
 Score = 47.0 bits (110), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 31/111 (27%), Positives = 53/111 (47%), Gaps = 9/111 (8%)
Query: 32  DLTARINMADAQFSFQQRGR----CYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWEL 87
           D    I + D  F+ + +GR    C  P +++PE +  K  ++   A D W+  VL++E+
Sbjct: 175 DQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNK---AVDWWALGVLIYEM 231
Query: 88  ATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKR 138
           A    PF    P+++  K+     ++  P   SS L  L+R  +  D  KR
Sbjct: 232 AAGYPPFFADQPIQIYEKIV--SGKVRFPSHFSSDLKDLLRNLLQVDLTKR 280

>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit (E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24) Isoelectric Variant Ca) And Mn2+ Adenylyl Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c Length = 350

Iteration: 1
 Score = 47.0 bits (110), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 31/111 (27%), Positives = 53/111 (47%), Gaps = 9/111 (8%)
Query: 32  DLTARINMADAQFSFQQRGR----CYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWEL 87
           D    I + D  F+ + +GR    C  P +++PE +  K  ++   A D W+  VL++E+
Sbjct: 175 DQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNK---AVDWWALGVLIYEM 231
Query: 88  ATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKR 138
           A    PF    P+++  K+     ++  P   SS L  L+R  +  D  KR
Sbjct: 232 AAGYPPFFADQPIQIYEKIV--SGKVRFPSHFSSDLKDLLRNLLQVDLTKR 280

>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-670 Length = 351

Iteration: 1
 Score = 47.0 bits (110), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 31/111 (27%), Positives = 53/111 (47%), Gaps = 9/111 (8%)
Query: 32  DLTARINMADAQFSFQQRGR----CYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWEL 87
           D    I + D  F+ + +GR    C  P +++PE +  K  ++   A D W+  VL++E+
Sbjct: 176 DQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNK---AVDWWALGVLIYEM 232
Query: 88  ATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKR 138
           A    PF    P+++  K+     ++  P   SS L  L+R  +  D  KR
Sbjct: 233 AAGYPPFFADQPIQIYEKIV--SGKVRFPSHFSSDLKDLLRNLLQVDLTKR 281

>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor Complex Length = 371

Iteration: 1
 Score = 47.0 bits (110), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 31/111 (27%), Positives = 53/111 (47%), Gaps = 9/111 (8%)
Query: 32  DLTARINMADAQFSFQQRGR----CYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWEL 87
           D    I + D  F+ + +GR    C  P +++PE +  K  ++   A D W+  VL++E+
Sbjct: 196 DQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNK---AVDWWALGVLIYEM 252
Query: 88  ATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKR 138
           A    PF    P+++  K+     ++  P   SS L  L+R  +  D  KR
Sbjct: 253 AAGYPPFFADQPIQIYEKIV--SGKVRFPSHFSSDLKDLLRNLLQVDLTKR 301

>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka C-Subunit:amp-Pnp:mg2+ Complex Length = 350

Iteration: 1
 Score = 47.0 bits (110), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 32/111 (28%), Positives = 53/111 (47%), Gaps = 9/111 (8%)
Query: 32  DLTARINMADAQFSFQQRGR----CYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWEL 87
           D    I + D  F+ + +GR    C  P +++PE +  K  ++   A D W+  VL++E+
Sbjct: 175 DQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIIISKGYNK---AVDWWALGVLIYEM 231
Query: 88  ATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKR 138
           A    PF    P+++  K+    +R   P   SS L  L+R  +  D  KR
Sbjct: 232 AAGYPPFFADQPIQIYEKIVSGKVR--FPSHFSSDLKDLLRNLLQVDLTKR 280

>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 47.0 bits (110), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 31/111 (27%), Positives = 53/111 (47%), Gaps = 9/111 (8%)
Query: 32  DLTARINMADAQFSFQQRGR----CYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWEL 87
           D    I + D  F+ + +GR    C  P +++PE +  K  ++   A D W+  VL++E+
Sbjct: 175 DQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNK---AVDWWALGVLIYEM 231
Query: 88  ATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKR 138
           A    PF    P+++  K+     ++  P   SS L  L+R  +  D  KR
Sbjct: 232 AAGYPPFFADQPIQIYEKIV--SGKVRFPSHFSSDLKDLLRNLLQVDLTKR 280

>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein Kinase A (Pka) Length = 350

Iteration: 1
 Score = 47.0 bits (110), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 31/111 (27%), Positives = 53/111 (47%), Gaps = 9/111 (8%)
Query: 32  DLTARINMADAQFSFQQRGR----CYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWEL 87
           D    I + D  F+ + +GR    C  P +++PE +  K  ++   A D W+  VL++E+
Sbjct: 175 DQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNK---AVDWWALGVLIYEM 231
Query: 88  ATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKR 138
           A    PF    P+++  K+     ++  P   SS L  L+R  +  D  KR
Sbjct: 232 AAGYPPFFADQPIQIYEKIV--SGKVRFPSHFSSDLKDLLRNLLQVDLTKR 280

>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb Length = 350

Iteration: 1
 Score = 47.0 bits (110), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 31/111 (27%), Positives = 53/111 (47%), Gaps = 9/111 (8%)
Query: 32  DLTARINMADAQFSFQQRGR----CYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWEL 87
           D    I + D  F+ + +GR    C  P +++PE +  K  ++   A D W+  VL++E+
Sbjct: 175 DQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNK---AVDWWALGVLIYEM 231
Query: 88  ATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKR 138
           A    PF    P+++  K+     ++  P   SS L  L+R  +  D  KR
Sbjct: 232 AAGYPPFFADQPIQIYEKIV--SGKVRFPSHFSSDLKDLLRNLLQVDLTKR 280

>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4- Chlorophenyl)-1-(7h-Pyrrolo(2, 3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine Length = 351

Iteration: 1
 Score = 47.0 bits (110), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 31/111 (27%), Positives = 53/111 (47%), Gaps = 9/111 (8%)
Query: 32  DLTARINMADAQFSFQQRGR----CYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWEL 87
           D    I + D  F+ + +GR    C  P +++PE +  K  ++   A D W+  VL++E+
Sbjct: 176 DQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNK---AVDWWALGVLIYEM 232
Query: 88  ATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKR 138
           A    PF    P+++  K+     ++  P   SS L  L+R  +  D  KR
Sbjct: 233 AAGYPPFFADQPIQIYEKIV--SGKVRFPSHFSSDLKDLLRNLLQVDLTKR 281

>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h- Purin-6-yl)-benzyl)-amine Length = 351

Iteration: 1
 Score = 47.0 bits (110), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 31/111 (27%), Positives = 53/111 (47%), Gaps = 9/111 (8%)
Query: 32  DLTARINMADAQFSFQQRGR----CYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWEL 87
           D    I + D  F+ + +GR    C  P +++PE +  K  ++   A D W+  VL++E+
Sbjct: 176 DQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNK---AVDWWALGVLIYEM 232
Query: 88  ATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKR 138
           A    PF    P+++  K+     ++  P   SS L  L+R  +  D  KR
Sbjct: 233 AAGYPPFFADQPIQIYEKIV--SGKVRFPSHFSSDLKDLLRNLLQVDLTKR 281

>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a, L173m, Q181k) With Compound 18 Length = 351

Iteration: 1
 Score = 47.0 bits (110), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 31/111 (27%), Positives = 53/111 (47%), Gaps = 9/111 (8%)
Query: 32  DLTARINMADAQFSFQQRGR----CYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWEL 87
           D    I + D  F+ + +GR    C  P +++PE +  K  ++   A D W+  VL++E+
Sbjct: 176 DQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNK---AVDWWALGVLIYEM 232
Query: 88  ATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKR 138
           A    PF    P+++  K+     ++  P   SS L  L+R  +  D  KR
Sbjct: 233 AAGYPPFFADQPIQIYEKIV--SGKVRFPSHFSSDLKDLLRNLLQVDLTKR 281

>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 351

Iteration: 1
 Score = 47.0 bits (110), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 31/111 (27%), Positives = 53/111 (47%), Gaps = 9/111 (8%)
Query: 32  DLTARINMADAQFSFQQRGR----CYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWEL 87
           D    I + D  F+ + +GR    C  P +++PE +  K  ++   A D W+  VL++E+
Sbjct: 176 DQQGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNK---AVDWWALGVLIYEM 232
Query: 88  ATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKR 138
           A    PF    P+++  K+     ++  P   SS L  L+R  +  D  KR
Sbjct: 233 AAGYPPFFADQPIQIYEKIV--SGKVRFPSHFSSDLKDLLRNLLQVDLTKR 281

>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant V617f (Mg- Atp-Bound Form) Length = 289

Iteration: 1
 Score = 46.6 bits (109), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 29/96 (30%), Positives = 51/96 (53%), Gaps = 6/96 (6%)
Query: 57  WMSPEALQKKPGDRNLEACDMWSFAVLLWELATR-EVPFADLTPMEVGMKVALEGLRITI 115
           W+ PE ++  P + NL A D WSF   LWE+ +  + P   L+ ++   K+     R  +
Sbjct: 183 WVPPECIEN-PKNLNL-ATDKWSFGTTLWEICSGGDKP---LSALDSQRKLQFYEDRHQL 237
Query: 116 PPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKM 151
           P   ++ L+ LI  CM+ +P  RP+F  ++  L+ +
Sbjct: 238 PAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSL 273

>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo Form) Length = 289

Iteration: 1
 Score = 46.6 bits (109), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 29/96 (30%), Positives = 51/96 (53%), Gaps = 6/96 (6%)
Query: 57  WMSPEALQKKPGDRNLEACDMWSFAVLLWELATR-EVPFADLTPMEVGMKVALEGLRITI 115
           W+ PE ++  P + NL A D WSF   LWE+ +  + P   L+ ++   K+     R  +
Sbjct: 183 WVPPECIEN-PKNLNL-ATDKWSFGTTLWEICSGGDKP---LSALDSQRKLQFYEDRHQL 237
Query: 116 PPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKM 151
           P   ++ L+ LI  CM+ +P  RP+F  ++  L+ +
Sbjct: 238 PAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSL 273

>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form Length = 279

Iteration: 1
 Score = 46.6 bits (109), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 34/124 (27%), Positives = 67/124 (54%), Gaps = 7/124 (5%)
Query: 27  CQIDEDLTARINMADAQFSFQQRGRCYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWE 86
           C+I +   AR+ + D +++ ++ G  +   W +PEA+    G   +++ ++WSF +LL+E
Sbjct: 148 CKIADFGLARV-IEDNEYTARE-GAKFPIKWTAPEAINF--GCFTIKS-NVWSFGILLYE 202
Query: 87  LATR-EVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVL 145
           + T  ++P+   T  +V M    +G R+         L  ++++C  E   +RPTFD + 
Sbjct: 203 IVTYGKIPYPGRTNADV-MSALSQGYRMPRMENCPDELYDIMKMCWKEKAEERPTFDYLQ 261
Query: 146 PILD 149
            +LD
Sbjct: 262 SVLD 265

>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene Homologue (V- Fes) Length = 377

Iteration: 1
 Score = 46.2 bits (108), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 37/147 (25%), Positives = 64/147 (43%), Gaps = 24/147 (16%)
Query: 26  CCQIDEDLTAR---------INMADAQFSFQQRGRCYYPA---------WMSPEALQKKP 67
           CC I  DL AR         + ++D   S ++    Y  +         W +PEAL    
Sbjct: 233 CC-IHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNY-- 289
Query: 68  GDRNLEACDMWSFAVLLWE-LATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKL 126
             R     D+WSF +LLWE  +    P+ +L+  +   +   +G R+  P      + +L
Sbjct: 290 -GRYSSESDVWSFGILLWETFSLGASPYPNLSNQQT-REFVEKGGRLPCPELCPDAVFRL 347
Query: 127 IRICMNEDPGKRPTFDMVLPILDKMKR 153
           +  C   +PG+RP+F  +   L  +++
Sbjct: 348 MEQCWAYEPGQRPSFSTIYQELQSIRK 374

>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 537

Iteration: 1
 Score = 46.2 bits (108), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 27/96 (28%), Positives = 49/96 (51%), Gaps = 5/96 (5%)
Query: 57  WMSPEALQKKPGDRNLEACDMWSFAVLLWELATREV-PFADLTPMEVGMKVALEGLRITI 115
           W +PE+L     ++     D+W+F VLLWE+AT  + P+  +   +V  ++  +  R+  
Sbjct: 424 WTAPESLAY---NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV-YELLEKDYRMER 479
Query: 116 PPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKM 151
           P G    + +L+R C   +P  RP+F  +    + M
Sbjct: 480 PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 515

>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine Kinase Length = 495

Iteration: 1
 Score = 45.8 bits (107), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 27/96 (28%), Positives = 49/96 (51%), Gaps = 5/96 (5%)
Query: 57  WMSPEALQKKPGDRNLEACDMWSFAVLLWELATREV-PFADLTPMEVGMKVALEGLRITI 115
           W +PE+L     ++     D+W+F VLLWE+AT  + P+  +   +V  ++  +  R+  
Sbjct: 385 WTAPESLAY---NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV-YELLEKDYRMER 440
Query: 116 PPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKM 151
           P G    + +L+R C   +P  RP+F  +    + M
Sbjct: 441 PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 476

>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent Protein Kinase Reveals Unexpected Apoenzyme Conformation Length = 350

Iteration: 1
 Score = 45.8 bits (107), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 31/111 (27%), Positives = 53/111 (47%), Gaps = 9/111 (8%)
Query: 32  DLTARINMADAQFSFQQRGR----CYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWEL 87
           D    I + D  F+ + +GR    C  P +++PE +  K  ++   A D W+  VL++++
Sbjct: 175 DQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNK---AVDWWALGVLIYQM 231
Query: 88  ATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKR 138
           A    PF    P+++  K+    +R   P   SS L  L+R  +  D  KR
Sbjct: 232 AAGYPPFFADQPIQIYEKIVSGKVR--FPSHFSSDLKDLLRNLLQVDLTKR 280

>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein Kinase Catalytic Subunit Length = 350

Iteration: 1
 Score = 45.8 bits (107), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/111 (27%), Positives = 53/111 (47%), Gaps = 9/111 (8%)
Query: 32  DLTARINMADAQFSFQQRGRCYY----PAWMSPEALQKKPGDRNLEACDMWSFAVLLWEL 87
           D    I + D  F+ + +GR +     P +++PE +  K  ++   A D W+  VL++E+
Sbjct: 175 DQQGYIQVTDFGFAKRVKGRTWXLXGTPEYLAPEIILSKGYNK---AVDWWALGVLIYEM 231
Query: 88  ATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKR 138
           A    PF    P+++  K+    +R   P   SS L  L+R  +  D  KR
Sbjct: 232 AAGYPPFFADQPIQIYEKIVSGKVR--FPSHFSSDLKDLLRNLLQVDLTKR 280

>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And Regulatory (Ri{alpha}) Subunits Of Pka Length = 350

Iteration: 1
 Score = 45.8 bits (107), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/111 (27%), Positives = 53/111 (47%), Gaps = 9/111 (8%)
Query: 32  DLTARINMADAQFSFQQRGRCYY----PAWMSPEALQKKPGDRNLEACDMWSFAVLLWEL 87
           D    I + D  F+ + +GR +     P +++PE +  K  ++   A D W+  VL++E+
Sbjct: 175 DQQGYIQVTDFGFAKRVKGRTWXLAGTPEYLAPEIILSKGYNK---AVDWWALGVLIYEM 231
Query: 88  ATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKR 138
           A    PF    P+++  K+    +R   P   SS L  L+R  +  D  KR
Sbjct: 232 AAGYPPFFADQPIQIYEKIVSGKVR--FPSHFSSDLKDLLRNLLQVDLTKR 280

>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase Length = 330

Iteration: 1
 Score = 45.8 bits (107), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 50/101 (49%), Gaps = 12/101 (11%)
Query: 52  CYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADL---TPMEVGMKVAL 108
           CY   +++PE L+++  D   E CD+WS  +LL+ +     PFA+    TP E+  ++  
Sbjct: 186 CYTANFVAPEVLKRQGYD---EGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIG- 241
Query: 109 EGLRITIPPG----ISSHLSKLIRICMNEDPGKRPTFDMVL 145
              + T+  G    +S     L+   ++ DP +R T   VL
Sbjct: 242 -SGKFTLSGGNWNTVSETAKDLVSKMLHVDPHQRLTAKQVL 281

>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma Viral Oncogene Homologue (V-Fes) In Complex With Staurosporine And A Consensus Peptide Length = 377

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 27/98 (27%), Positives = 48/98 (48%), Gaps = 5/98 (5%)
Query: 57  WMSPEALQKKPGDRNLEACDMWSFAVLLWE-LATREVPFADLTPMEVGMKVALEGLRITI 115
           W +PEAL      R     D+WSF +LLWE  +    P+ +L+  +   +   +G R+  
Sbjct: 281 WTAPEALNY---GRYSSESDVWSFGILLWETFSLGASPYPNLSNQQT-REFVEKGGRLPC 336
Query: 116 PPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKMKR 153
           P      + +L+  C   +PG+RP+F  +   L  +++
Sbjct: 337 PELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRK 374

>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With Gleevec Length = 292

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 39/133 (29%), Positives = 57/133 (42%), Gaps = 26/133 (19%)
Query: 29  IDEDLTAR---------INMADAQFSFQQRGRCY-------YP-AWMSPEALQKKPGDRN 71
           I  DL AR         + +AD   S    G  Y       +P  W +PE+L        
Sbjct: 152 IHRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNTFSIK 211
Query: 72  LEACDMWSFAVLLWELATREV---PFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIR 128
               D+W+F VLLWE+AT  +   P  DL+ +     +  +G R+  P G    + +L+R
Sbjct: 212 ---SDVWAFGVLLWEIATYGMSPYPGIDLSQV---YDLLEKGYRMEQPEGCPPKVYELMR 265
Query: 129 ICMNEDPGKRPTF 141
            C    P  RP+F
Sbjct: 266 ACWKWSPADRPSF 278

>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length Carboxyl-Terminal Src Kinase At 2.5 A Resolution Length = 450

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 34/118 (28%), Positives = 60/118 (50%), Gaps = 11/118 (9%)
Query: 29  IDEDLTARIN---MADAQFSFQQRGRCYYPA-WMSPEALQKKPGDRNLEACDMWSFAVLL 84
           + ED  A+++   +     S Q  G+   P  W +PEAL++K   +     D+WSF +LL
Sbjct: 322 VSEDNVAKVSDFGLTKEASSTQDTGKL--PVKWTAPEALREK---KFSTKSDVWSFGILL 376
Query: 85  WELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTF 141
           WE+ +   VP+  +   +V  +V  +G ++  P G    +  +++ C + D   RPTF
Sbjct: 377 WEIYSFGRVPYPRIPLKDVVPRVE-KGYKMDAPDGCPPAVYDVMKNCWHLDAATRPTF 433

>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain Length = 346

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 50/101 (49%), Gaps = 12/101 (11%)
Query: 52  CYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADL---TPMEVGMKVAL 108
           CY   +++PE L+++  D   E CD+WS  +LL+ +     PFA+    TP E+  ++  
Sbjct: 186 CYTANFVAPEVLKRQGYD---EGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIG- 241
Query: 109 EGLRITIPPG----ISSHLSKLIRICMNEDPGKRPTFDMVL 145
              + T+  G    +S     L+   ++ DP +R T   VL
Sbjct: 242 -SGKFTLSGGNWNTVSETAKDLVSKMLHVDPHQRLTAKQVL 281

>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 40/143 (27%), Positives = 63/143 (44%), Gaps = 26/143 (18%)
Query: 29  IDEDLTAR---------INMADAQFSFQQRGRCYY-PA-------WMSPEALQKKPGDRN 71
           I  DL AR         + +AD   S    G  Y  PA       W +PE+L     ++ 
Sbjct: 135 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAY---NKF 191
Query: 72  LEACDMWSFAVLLWELATREV---PFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIR 128
               D+W+F VLLWE+AT  +   P  DL+ +    ++  +  R+  P G    + +L+R
Sbjct: 192 SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV---YELLEKDYRMERPEGCPEKVYELMR 248
Query: 129 ICMNEDPGKRPTFDMVLPILDKM 151
            C   +P  RP+F  +    + M
Sbjct: 249 ACWQWNPSDRPSFAEIHQAFETM 271

>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant Abl Mutant In Complex With The Aurora Kinase Inhibitor Vx-680 Length = 287

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 40/143 (27%), Positives = 63/143 (44%), Gaps = 26/143 (18%)
Query: 29  IDEDLTAR---------INMADAQFSFQQRGRCYY-PA-------WMSPEALQKKPGDRN 71
           I  DL AR         + +AD   S    G  Y  PA       W +PE+L     ++ 
Sbjct: 134 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAY---NKF 190
Query: 72  LEACDMWSFAVLLWELATREV---PFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIR 128
               D+W+F VLLWE+AT  +   P  DL+ +    ++  +  R+  P G    + +L+R
Sbjct: 191 SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV---YELLEKDYRMERPEGCPEKVYELMR 247
Query: 129 ICMNEDPGKRPTFDMVLPILDKM 151
            C   +P  RP+F  +    + M
Sbjct: 248 ACWQWNPSDRPSFAEIHQAFETM 270

>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound With Ppy-A Length = 288

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 39/143 (27%), Positives = 63/143 (44%), Gaps = 26/143 (18%)
Query: 29  IDEDLTAR---------INMADAQFSFQQRGRCY-------YP-AWMSPEALQKKPGDRN 71
           I  DL AR         + +AD   S    G  Y       +P  W +PE+L     ++ 
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY---NKF 189
Query: 72  LEACDMWSFAVLLWELATREV---PFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIR 128
               D+W+F VLLWE+AT  +   P  DL+ +    ++  +  R+  P G    + +L+R
Sbjct: 190 SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV---YELLEKDYRMERPEGCPEKVYELMR 246
Query: 129 ICMNEDPGKRPTFDMVLPILDKM 151
            C   +P  RP+F  +    + M
Sbjct: 247 ACWQWNPSDRPSFAEIHQAFETM 269

>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine Kinase Domain Length = 314

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 33/109 (30%), Positives = 52/109 (47%), Gaps = 6/109 (5%)
Query: 45  SFQQRGRCYYPA-WMSPEALQKKPGDRNLEACDMWSFAVLLWELAT-REVPFADLTPMEV 102
           S+ +R +   P  WM+ E+L            D+WSF VLLWE+ T    P+  + P  +
Sbjct: 205 SYVKRSQGRIPVKWMAIESLFDHI---YTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERL 261
Query: 103 GMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKM 151
              +   G R+  P   S  + +L+  C  ++P KRP F  +   L+KM
Sbjct: 262 -FNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKM 309

>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a Length = 288

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 39/143 (27%), Positives = 63/143 (44%), Gaps = 26/143 (18%)
Query: 29  IDEDLTAR---------INMADAQFSFQQRGRCY-------YP-AWMSPEALQKKPGDRN 71
           I  DL AR         + +AD   S    G  Y       +P  W +PE+L     ++ 
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY---NKF 189
Query: 72  LEACDMWSFAVLLWELATREV---PFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIR 128
               D+W+F VLLWE+AT  +   P  DL+ +    ++  +  R+  P G    + +L+R
Sbjct: 190 SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV---YELLEKDYRMERPEGCPEKVYELMR 246
Query: 129 ICMNEDPGKRPTFDMVLPILDKM 151
            C   +P  RP+F  +    + M
Sbjct: 247 ACWQWNPSDRPSFAEIHQAFETM 269

>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable, Small-Molecule C- Abl Kinase Activator That Binds To The Myristoyl Binding Site Length = 298

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 39/143 (27%), Positives = 63/143 (44%), Gaps = 26/143 (18%)
Query: 29  IDEDLTAR---------INMADAQFSFQQRGRCY-------YP-AWMSPEALQKKPGDRN 71
           I  DL AR         + +AD   S    G  Y       +P  W +PE+L     ++ 
Sbjct: 146 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY---NKF 202
Query: 72  LEACDMWSFAVLLWELATREV---PFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIR 128
               D+W+F VLLWE+AT  +   P  DL+ +    ++  +  R+  P G    + +L+R
Sbjct: 203 SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV---YELLEKDYRMERPEGCPEKVYELMR 259
Query: 129 ICMNEDPGKRPTFDMVLPILDKM 151
            C   +P  RP+F  +    + M
Sbjct: 260 ACWQWNPSDRPSFAEIHQAFETM 282

>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine Kinase Domain Length = 287

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 39/143 (27%), Positives = 63/143 (44%), Gaps = 26/143 (18%)
Query: 29  IDEDLTAR---------INMADAQFSFQQRGRCY-------YP-AWMSPEALQKKPGDRN 71
           I  DL AR         + +AD   S    G  Y       +P  W +PE+L     ++ 
Sbjct: 135 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY---NKF 191
Query: 72  LEACDMWSFAVLLWELATREV---PFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIR 128
               D+W+F VLLWE+AT  +   P  DL+ +    ++  +  R+  P G    + +L+R
Sbjct: 192 SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV---YELLEKDYRMERPEGCPEKVYELMR 248
Query: 129 ICMNEDPGKRPTFDMVLPILDKM 151
            C   +P  RP+F  +    + M
Sbjct: 249 ACWQWNPSDRPSFAEIHQAFETM 271

>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571, Glivec) Length = 273

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 39/143 (27%), Positives = 63/143 (44%), Gaps = 26/143 (18%)
Query: 29  IDEDLTAR---------INMADAQFSFQQRGRCY-------YP-AWMSPEALQKKPGDRN 71
           I  DL AR         + +AD   S    G  Y       +P  W +PE+L     ++ 
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY---NKF 189
Query: 72  LEACDMWSFAVLLWELATREV---PFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIR 128
               D+W+F VLLWE+AT  +   P  DL+ +    ++  +  R+  P G    + +L+R
Sbjct: 190 SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV---YELLEKDYRMERPEGCPEKVYELMR 246
Query: 129 ICMNEDPGKRPTFDMVLPILDKM 151
            C   +P  RP+F  +    + M
Sbjct: 247 ACWQWNPSDRPSFAEIHQAFETM 269

>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082 Length = 270

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 39/143 (27%), Positives = 63/143 (44%), Gaps = 26/143 (18%)
Query: 29  IDEDLTAR---------INMADAQFSFQQRGRCY-------YP-AWMSPEALQKKPGDRN 71
           I  DL AR         + +AD   S    G  Y       +P  W +PE+L     ++ 
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY---NKF 189
Query: 72  LEACDMWSFAVLLWELATREV---PFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIR 128
               D+W+F VLLWE+AT  +   P  DL+ +    ++  +  R+  P G    + +L+R
Sbjct: 190 SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV---YELLEKDYRMERPEGCPEKVYELMR 246
Query: 129 ICMNEDPGKRPTFDMVLPILDKM 151
            C   +P  RP+F  +    + M
Sbjct: 247 ACWQWNPSDRPSFAEIHQAFETM 269

>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating Kinase 1 (Ask1) With Imidazopyridine Inhibitor Length = 269

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 27/83 (32%), Positives = 41/83 (49%), Gaps = 2/83 (2%)
Query: 57  WMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGM-KVALEGLRITI 115
           +M+PE + K P     +A D+WS    + E+AT + PF +L   +  M KV +  +   I
Sbjct: 175 YMAPEIIDKGPRGYG-KAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEI 233
Query: 116 PPGISSHLSKLIRICMNEDPGKR 138
           P  +S+     I  C   DP KR
Sbjct: 234 PESMSAEAKAFILKCFEPDPDKR 256

>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase Catalytic Domain Complexed With Type Ii Inhibitor Length = 287

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 39/143 (27%), Positives = 63/143 (44%), Gaps = 26/143 (18%)
Query: 29  IDEDLTAR---------INMADAQFSFQQRGRCY-------YP-AWMSPEALQKKPGDRN 71
           I  DL AR         + +AD   S    G  Y       +P  W +PE+L     ++ 
Sbjct: 135 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY---NKF 191
Query: 72  LEACDMWSFAVLLWELATREV---PFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIR 128
               D+W+F VLLWE+AT  +   P  DL+ +    ++  +  R+  P G    + +L+R
Sbjct: 192 SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV---YELLEKDYRMERPEGCPEKVYELMR 248
Query: 129 ICMNEDPGKRPTFDMVLPILDKM 151
            C   +P  RP+F  +    + M
Sbjct: 249 ACWQWNPSDRPSFAEIHQAFETM 271

>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase Kinase 5 Length = 295

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 27/83 (32%), Positives = 41/83 (49%), Gaps = 2/83 (2%)
Query: 57  WMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGM-KVALEGLRITI 115
           +M+PE + K P     +A D+WS    + E+AT + PF +L   +  M KV +  +   I
Sbjct: 189 YMAPEIIDKGPRGYG-KAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEI 247
Query: 116 PPGISSHLSKLIRICMNEDPGKR 138
           P  +S+     I  C   DP KR
Sbjct: 248 PESMSAEAKAFILKCFEPDPDKR 270

>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970 Length = 277

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 39/143 (27%), Positives = 63/143 (44%), Gaps = 26/143 (18%)
Query: 29  IDEDLTAR---------INMADAQFSFQQRGRCY-------YP-AWMSPEALQKKPGDRN 71
           I  DL AR         + +AD   S    G  Y       +P  W +PE+L     ++ 
Sbjct: 137 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY---NKF 193
Query: 72  LEACDMWSFAVLLWELATREV---PFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIR 128
               D+W+F VLLWE+AT  +   P  DL+ +    ++  +  R+  P G    + +L+R
Sbjct: 194 SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV---YELLEKDYRMERPEGCPEKVYELMR 250
Query: 129 ICMNEDPGKRPTFDMVLPILDKM 151
            C   +P  RP+F  +    + M
Sbjct: 251 ACWQWNPSDRPSFAEIHQAFETM 273

>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A Dfg-Out Inhibitor Ap24534 Length = 284

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 39/143 (27%), Positives = 63/143 (44%), Gaps = 26/143 (18%)
Query: 29  IDEDLTAR---------INMADAQFSFQQRGRCY-------YP-AWMSPEALQKKPGDRN 71
           I  DL AR         + +AD   S    G  Y       +P  W +PE+L     ++ 
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY---NKF 189
Query: 72  LEACDMWSFAVLLWELATREV---PFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIR 128
               D+W+F VLLWE+AT  +   P  DL+ +    ++  +  R+  P G    + +L+R
Sbjct: 190 SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV---YELLEKDYRMERPEGCPEKVYELMR 246
Query: 129 ICMNEDPGKRPTFDMVLPILDKM 151
            C   +P  RP+F  +    + M
Sbjct: 247 ACWQWNPSDRPSFAEIHQAFETM 269

>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i Mutant In Complex With Dcc-2036 Length = 277

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 39/143 (27%), Positives = 63/143 (44%), Gaps = 26/143 (18%)
Query: 29  IDEDLTAR---------INMADAQFSFQQRGRCY-------YP-AWMSPEALQKKPGDRN 71
           I  DL AR         + +AD   S    G  Y       +P  W +PE+L     ++ 
Sbjct: 138 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY---NKF 194
Query: 72  LEACDMWSFAVLLWELATREV---PFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIR 128
               D+W+F VLLWE+AT  +   P  DL+ +    ++  +  R+  P G    + +L+R
Sbjct: 195 SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV---YELLEKDYRMERPEGCPEKVYELMR 251
Query: 129 ICMNEDPGKRPTFDMVLPILDKM 151
            C   +P  RP+F  +    + M
Sbjct: 252 ACWQWNPSDRPSFAEIHQAFETM 274

>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound With A Dfg- Out Inhibitor Ap24589 Length = 284

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 39/143 (27%), Positives = 63/143 (44%), Gaps = 26/143 (18%)
Query: 29  IDEDLTAR---------INMADAQFSFQQRGRCY-------YP-AWMSPEALQKKPGDRN 71
           I  DL AR         + +AD   S    G  Y       +P  W +PE+L     ++ 
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY---NKF 189
Query: 72  LEACDMWSFAVLLWELATREV---PFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIR 128
               D+W+F VLLWE+AT  +   P  DL+ +    ++  +  R+  P G    + +L+R
Sbjct: 190 SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV---YELLEKDYRMERPEGCPEKVYELMR 246
Query: 129 ICMNEDPGKRPTFDMVLPILDKM 151
            C   +P  RP+F  +    + M
Sbjct: 247 ACWQWNPSDRPSFAEIHQAFETM 269

>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In Complex With Dcc- 2036 Length = 277

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 39/143 (27%), Positives = 63/143 (44%), Gaps = 26/143 (18%)
Query: 29  IDEDLTAR---------INMADAQFSFQQRGRCY-------YP-AWMSPEALQKKPGDRN 71
           I  DL AR         + +AD   S    G  Y       +P  W +PE+L     ++ 
Sbjct: 138 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY---NKF 194
Query: 72  LEACDMWSFAVLLWELATREV---PFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIR 128
               D+W+F VLLWE+AT  +   P  DL+ +    ++  +  R+  P G    + +L+R
Sbjct: 195 SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV---YELLEKDYRMERPEGCPEKVYELMR 251
Query: 129 ICMNEDPGKRPTFDMVLPILDKM 151
            C   +P  RP+F  +    + M
Sbjct: 252 ACWQWNPSDRPSFAEIHQAFETM 274

>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex With Inno-406 Length = 293

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 39/143 (27%), Positives = 63/143 (44%), Gaps = 26/143 (18%)
Query: 29  IDEDLTAR---------INMADAQFSFQQRGRCY-------YP-AWMSPEALQKKPGDRN 71
           I  DL AR         + +AD   S    G  Y       +P  W +PE+L     ++ 
Sbjct: 138 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY---NKF 194
Query: 72  LEACDMWSFAVLLWELATREV---PFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIR 128
               D+W+F VLLWE+AT  +   P  DL+ +    ++  +  R+  P G    + +L+R
Sbjct: 195 SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV---YELLEKDYRMERPEGCPEKVYELMR 251
Query: 129 ICMNEDPGKRPTFDMVLPILDKM 151
            C   +P  RP+F  +    + M
Sbjct: 252 ACWQWNPSDRPSFAEIHQAFETM 274

>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A Small Molecule Inhibitor Length = 293

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 39/143 (27%), Positives = 63/143 (44%), Gaps = 26/143 (18%)
Query: 29  IDEDLTAR---------INMADAQFSFQQRGRCY-------YP-AWMSPEALQKKPGDRN 71
           I  DL AR         + +AD   S    G  Y       +P  W +PE+L     ++ 
Sbjct: 138 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAY---NKF 194
Query: 72  LEACDMWSFAVLLWELATREV---PFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIR 128
               D+W+F VLLWE+AT  +   P  DL+ +    ++  +  R+  P G    + +L+R
Sbjct: 195 SIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV---YELLEKDYRMERPEGCPEKVYELMR 251
Query: 129 ICMNEDPGKRPTFDMVLPILDKM 151
            C   +P  RP+F  +    + M
Sbjct: 252 ACWQWNPSDRPSFAEIHQAFETM 274

>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of Camp-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/111 (28%), Positives = 52/111 (46%), Gaps = 9/111 (8%)
Query: 32  DLTARINMADAQFSFQQRGR----CYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWEL 87
           D    I + D  F+ + +GR    C  P  ++PE +  K  ++   A D W+  VL++E+
Sbjct: 175 DQQGYIQVTDFGFAKRVKGRTWXLCGTPEALAPEIILSKGYNK---AVDWWALGVLIYEM 231
Query: 88  ATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKR 138
           A    PF    P+++  K+    +R   P   SS L  L+R  +  D  KR
Sbjct: 232 AAGYPPFFADQPIQIYEKIVSGKVR--FPSHFSSDLKDLLRNLLQVDLTKR 280

>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal Sh3 Domain Length = 341

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/102 (28%), Positives = 47/102 (46%), Gaps = 5/102 (4%)
Query: 41  DAQFSFQQRGRCYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWELAT-REVPFADLTP 99
           D  +  Q+  +  + AW +PE+L+ +       A D W F V LWE+ T  + P+  L  
Sbjct: 169 DDHYVMQEHRKVPF-AWCAPESLKTRTFS---HASDTWMFGVTLWEMFTYGQEPWIGLNG 224
Query: 100 MEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTF 141
            ++  K+  EG R+  P      +  ++  C    P  RPTF
Sbjct: 225 SQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTF 266

>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit Of Camp- Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/107 (27%), Positives = 51/107 (47%), Gaps = 9/107 (8%)
Query: 32  DLTARINMADAQFSFQQRGR----CYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWEL 87
           D    I + D  F+ + +GR    C  P +++PE +  K  ++   A D W+  VL++E+
Sbjct: 175 DQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNK---AVDWWALGVLIYEM 231
Query: 88  ATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNED 134
           A    PF    P+++  K+     ++  P   SS L  L+R  +  D
Sbjct: 232 AAGYPPFFADQPIQIYEKIV--SGKVRFPSHFSSDLKDLLRNLLQVD 276

>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor Cis-3-[8-amino-1-(4- Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol Length = 273

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/102 (28%), Positives = 47/102 (46%), Gaps = 5/102 (4%)
Query: 41  DAQFSFQQRGRCYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATR-EVPFADLTP 99
           D  +  Q+  +  + AW +PE+L+ +       A D W F V LWE+ T  + P+  L  
Sbjct: 165 DDHYVMQEHRKVPF-AWCAPESLKTRTFS---HASDTWMFGVTLWEMFTYGQEPWIGLNG 220
Query: 100 MEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTF 141
            ++  K+  EG R+  P      +  ++  C    P  RPTF
Sbjct: 221 SQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTF 262

>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95 Length = 276

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/102 (28%), Positives = 47/102 (46%), Gaps = 5/102 (4%)
Query: 41  DAQFSFQQRGRCYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATR-EVPFADLTP 99
           D  +  Q+  +  + AW +PE+L+ +       A D W F V LWE+ T  + P+  L  
Sbjct: 165 DDHYVMQEHRKVPF-AWCAPESLKTRTFS---HASDTWMFGVTLWEMFTYGQEPWIGLNG 220
Query: 100 MEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTF 141
            ++  K+  EG R+  P      +  ++  C    P  RPTF
Sbjct: 221 SQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTF 262

>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein Kina Length = 313

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/130 (29%), Positives = 63/130 (48%), Gaps = 13/130 (10%)
Query: 26  CCQIDEDLTARINMADAQFSFQQRGR-CYYPA-WMSPEALQKKPGDRNLEA-CDMWSFAV 82
            C  D  L+ +I   D    + ++GR    P  W++ E+L     DR   +  D+W+F V
Sbjct: 186 VCVADFGLSKKIYSGD----YYRQGRIAKMPVKWIAIESL----ADRVYTSKSDVWAFGV 237
Query: 83  LLWELATREV-PFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTF 141
            +WE+ATR + P+  +   E+     L G R+  P      L +++  C   DP  RPTF
Sbjct: 238 TMWEIATRGMTPYPGVQNHEM-YDYLLHGHRLKQPEDCLDELYEIMYSCWRTDPLDRPTF 296
Query: 142 DMVLPILDKM 151
            ++   L+K+
Sbjct: 297 SVLRLQLEKL 306

>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain Length = 277

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/102 (28%), Positives = 47/102 (46%), Gaps = 5/102 (4%)
Query: 41  DAQFSFQQRGRCYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWELAT-REVPFADLTP 99
           D  +  Q+  +  + AW +PE+L+ +       A D W F V LWE+ T  + P+  L  
Sbjct: 169 DDHYVMQEHRKVPF-AWCAPESLKTRTFS---HASDTWMFGVTLWEMFTYGQEPWIGLNG 224
Query: 100 MEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTF 141
            ++  K+  EG R+  P      +  ++  C    P  RPTF
Sbjct: 225 SQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTF 266

>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662 Length = 279

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/111 (31%), Positives = 52/111 (46%), Gaps = 7/111 (6%)
Query: 35  ARINMADAQFSFQQRGRCYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPF 94
           ARI   D  F+ +  G  YY   MSPE + +   +   E  D+WS   LL+EL     PF
Sbjct: 163 ARILNHDEDFAKEFVGTPYY---MSPEQMNRMSYN---EKSDIWSLGCLLYELCALMPPF 216
Query: 95  ADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVL 145
              +  E+  K+  EG    IP   S  L+++I   +N     RP+ + +L
Sbjct: 217 TAFSQKELAGKIR-EGKFRRIPYRYSDELNEIITRMLNLKDYHRPSVEEIL 266

>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase Domain Length = 314

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Query: 75  CDMWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNE 133
            D+WSF VLLWE+ T    P+  + P  +   +   G R+  P   S  + +L+  C  +
Sbjct: 233 SDVWSFGVLLWEIVTLGGNPYPGIPPERL-FNLLKTGHRMERPDNCSEEMYRLMLQCWKQ 291
Query: 134 DPGKRPTFDMVLPILDKM 151
           +P KRP F  +   L+KM
Sbjct: 292 EPDKRPVFADISKDLEKM 309

>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase Domain Complexed With The Inhibitor Pp1 Length = 314

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 26/78 (33%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Query: 75  CDMWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNE 133
            D+WSF VLLWE+ T    P+  + P  +   +   G R+  P   S  + +L+  C  +
Sbjct: 233 SDVWSFGVLLWEIVTLGGNPYPGIPPERL-FNLLKTGHRMERPDNCSEEMYRLMLQCWKQ 291
Query: 134 DPGKRPTFDMVLPILDKM 151
           +P KRP F  +   L+KM
Sbjct: 292 EPDKRPVFADISKDLEKM 309

>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit Of Camp- Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 31/111 (27%), Positives = 52/111 (46%), Gaps = 9/111 (8%)
Query: 32  DLTARINMADAQFSFQQRGR----CYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWEL 87
           D    I + D  F+ + +GR    C  P +++P  +  K  ++   A D W+  VL++E+
Sbjct: 175 DQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPAIILSKGYNK---AVDWWALGVLIYEM 231
Query: 88  ATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKR 138
           A    PF    P+++  K+    +R   P   SS L  L+R  +  D  KR
Sbjct: 232 AAGYPPFFADQPIQIYEKIVSGKVR--FPSHFSSDLKDLLRNLLQVDLTKR 280

>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of The Tyrosine Kinase Ack1 Length = 291

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/102 (28%), Positives = 47/102 (46%), Gaps = 5/102 (4%)
Query: 41  DAQFSFQQRGRCYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWELAT-REVPFADLTP 99
           D  +  Q+  +  + AW +PE+L+ +       A D W F V LWE+ T  + P+  L  
Sbjct: 175 DDHYVMQEHRKVPF-AWCAPESLKTRTFS---HASDTWMFGVTLWEMFTYGQEPWIGLNG 230
Query: 100 MEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTF 141
            ++  K+  EG R+  P      +  ++  C    P  RPTF
Sbjct: 231 SQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTF 272

>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered N- Terminal Helix Length = 350

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/111 (27%), Positives = 52/111 (46%), Gaps = 9/111 (8%)
Query: 32  DLTARINMADAQFSFQQRGR----CYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWEL 87
           D    I + D   + + +GR    C  P +++PE +  K  ++   A D W+  VL++E+
Sbjct: 175 DQQGYIQVTDFGLAKRVKGRTWXLCGTPEYLAPEIILSKGYNK---AVDWWALGVLIYEM 231
Query: 88  ATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKR 138
           A    PF    P+++  K+     ++  P   SS L  L+R  +  D  KR
Sbjct: 232 AAGYPPFFADQPIQIYEKIV--SGKVRFPSHFSSDLKDLLRNLLQVDLTKR 280

>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To Activated Abl Kinase Domain Length = 278

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/98 (28%), Positives = 49/98 (50%), Gaps = 9/98 (9%)
Query: 57  WMSPEALQKKPGDRNLEACDMWSFAVLLWELATREV---PFADLTPMEVGMKVALEGLRI 113
           W +PE+L     ++     D+W+F VLLWE+AT  +   P  DL+ +    ++  +  R+
Sbjct: 183 WTAPESLAY---NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV---YELLEKDYRM 236
Query: 114 TIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKM 151
             P G    + +L+R C   +P  RP+F  +    + M
Sbjct: 237 ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 274

>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/111 (27%), Positives = 52/111 (46%), Gaps = 9/111 (8%)
Query: 32  DLTARINMADAQFSFQQRGR----CYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWEL 87
           D    I + D   + + +GR    C  P +++PE +  K  ++   A D W+  VL++E+
Sbjct: 175 DQQGYIKVTDFGLAKRVKGRTWXLCGTPEYLAPEIILSKGYNK---AVDWWALGVLIYEM 231
Query: 88  ATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKR 138
           A    PF    P+++  K+     ++  P   SS L  L+R  +  D  KR
Sbjct: 232 AAGYPPFFADQPIQIYEKIV--SGKVRFPSHFSSDLKDLLRNLLQVDLTKR 280

>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With The Inhibitor Pha-739358 Length = 286

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/98 (28%), Positives = 49/98 (50%), Gaps = 9/98 (9%)
Query: 57  WMSPEALQKKPGDRNLEACDMWSFAVLLWELATREV---PFADLTPMEVGMKVALEGLRI 113
           W +PE+L     ++     D+W+F VLLWE+AT  +   P  DL+ +    ++  +  R+
Sbjct: 179 WTAPESLAY---NKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV---YELLEKDYRM 232
Query: 114 TIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKM 151
             P G    + +L+R C   +P  RP+F  +    + M
Sbjct: 233 ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 270

>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In Complex With Inhibitor Staurosporine Length = 278

Iteration: 1
 Score = 44.3 bits (103), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 28/97 (28%), Positives = 53/97 (54%), Gaps = 5/97 (5%)
Query: 57  WMSPEALQKKPGDRNLEACDMWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITI 115
           W +PEAL++K   +     D+WSF +LLWE+ +   VP+  +   +V  +V  +G ++  
Sbjct: 180 WTAPEALREK---KFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVE-KGYKMDA 235
Query: 116 PPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKMK 152
           P G    + ++++ C + D   RP+F  +   L+ +K
Sbjct: 236 PDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIK 272

>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 263

Iteration: 1
 Score = 44.3 bits (103), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 35/129 (27%), Positives = 66/129 (51%), Gaps = 11/129 (8%)
Query: 29  IDEDLTARIN---MADAQFSFQQRGRCYYPA-WMSPEALQKKPGDRNLEACDMWSFAVLL 84
           + ED  A+++   +     S Q  G+   P  W +PEAL++K   +     D+WSF +LL
Sbjct: 135 VSEDNVAKVSDFGLTKEASSTQDTGKL--PVKWTAPEALREK---KFSTKSDVWSFGILL 189
Query: 85  WELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDM 143
           WE+ +   VP+  +   +V  +V  +G ++  P G    + ++++ C + D   RP+F  
Sbjct: 190 WEIYSFGRVPYPRIPLKDVVPRVE-KGYKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQ 248
Query: 144 VLPILDKMK 152
           +   L+ +K
Sbjct: 249 LREQLEHIK 257

>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent Protein Kinase With Unphosphorylated Activation Loop Length = 371

Iteration: 1
 Score = 44.3 bits (103), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 31/111 (27%), Positives = 52/111 (46%), Gaps = 9/111 (8%)
Query: 32  DLTARINMADAQFSFQQRGR----CYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWEL 87
           D    I + D  F+ + +G     C  P +++PE +  K  ++   A D W+  VL++E+
Sbjct: 196 DQQGYIQVTDFGFAKRVKGATWTLCGTPEYLAPEIILSKGYNK---AVDWWALGVLIYEM 252
Query: 88  ATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKR 138
           A    PF    P+++  K+    +R   P   SS L  L+R  +  D  KR
Sbjct: 253 AAGYPPFFADQPIQIYEKIVSGKVR--FPSHFSSDLKDLLRNLLQVDLTKR 301

>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound Length = 279

Iteration: 1
 Score = 44.3 bits (103), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 35/111 (31%), Positives = 51/111 (45%), Gaps = 7/111 (6%)
Query: 35  ARINMADAQFSFQQRGRCYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPF 94
           ARI   D  F+    G  YY   MSPE + +   +   E  D+WS   LL+EL     PF
Sbjct: 163 ARILNHDTSFAKTFVGTPYY---MSPEQMNRMSYN---EKSDIWSLGCLLYELCALMPPF 216
Query: 95  ADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVL 145
              +  E+  K+  EG    IP   S  L+++I   +N     RP+ + +L
Sbjct: 217 TAFSQKELAGKIR-EGKFRRIPYRYSDELNEIITRMLNLKDYHRPSVEEIL 266

>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand Length = 279

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 35/111 (31%), Positives = 51/111 (45%), Gaps = 7/111 (6%)
Query: 35  ARINMADAQFSFQQRGRCYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPF 94
           ARI   D  F+    G  YY   MSPE + +   +   E  D+WS   LL+EL     PF
Sbjct: 163 ARILNHDTSFAKAFVGTPYY---MSPEQMNRMSYN---EKSDIWSLGCLLYELCALMPPF 216
Query: 95  ADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVL 145
              +  E+  K+  EG    IP   S  L+++I   +N     RP+ + +L
Sbjct: 217 TAFSQKELAGKIR-EGKFRRIPYRYSDELNEIITRMLNLKDYHRPSVEEIL 266

>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor Length = 275

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 27/87 (31%), Positives = 41/87 (47%), Gaps = 4/87 (4%)
Query: 56  AWMSPEALQKKPGDRNLEACDMWSFAVLLWELATR-EVPFADLTPMEVGMKVALEGLRIT 114
           AW +PE+L+ +       A D W F V LWE+ T  + P+  L   ++  K+  EG R+ 
Sbjct: 179 AWCAPESLKTRTFS---HASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLP 235
Query: 115 IPPGISSHLSKLIRICMNEDPGKRPTF 141
            P      +  ++  C    P  RPTF
Sbjct: 236 RPEDCPQDIYNVMVQCWAHKPEDRPTF 262

>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5 Length = 317

Iteration: 1
 Score = 43.9 bits (102), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 31/138 (22%), Positives = 60/138 (43%), Gaps = 26/138 (18%)
Query: 9   SFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQRGRCYYPAWMSPEALQKKPG 68
           S  L S      + F FC Q+ +++  R  +               P WM+PE + + P 
Sbjct: 171 SILLTSDGRIKLSDFGFCAQVSKEVPKRKXLVGT------------PYWMAPEVISRLPY 218
Query: 69  DRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPP------GISSH 122
              +   D+WS  +++ E+   E P+ +  P++     A+  +R ++PP       +SS 
Sbjct: 219 GTEV---DIWSLGIMVIEMIDGEPPYFNEPPLQ-----AMRRIRDSLPPRVKDLHKVSSV 270
Query: 123 LSKLIRICMNEDPGKRPT 140
           L   + + +  +P +R T
Sbjct: 271 LRGFLDLMLVREPSQRAT 288

>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase Catalytic Subunit From Saccharomyces Cerevisiae Length = 318

Iteration: 1
 Score = 43.9 bits (102), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 24/87 (27%), Positives = 43/87 (49%), Gaps = 5/87 (5%)
Query: 52  CYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGL 111
           C  P +++PE +  KP ++++   D WSF +L++E+     PF D   M+   K+    L
Sbjct: 164 CGTPDYIAPEVVSTKPYNKSI---DWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAEL 220
Query: 112 RITIPPGISSHLSKLIRICMNEDPGKR 138
           R   PP  +  +  L+   +  D  +R
Sbjct: 221 R--FPPFFNEDVKDLLSRLITRDLSQR 245

>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And Unphosphorylated Kinase Domains Of The Cdc42-Associated Tyrosine Kinase Ack1 Bound To Amp-Pcp Length = 291

Iteration: 1
 Score = 43.9 bits (102), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 27/87 (31%), Positives = 41/87 (47%), Gaps = 4/87 (4%)
Query: 56  AWMSPEALQKKPGDRNLEACDMWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRIT 114
           AW +PE+L+ +       A D W F V LWE+ T  + P+  L   ++  K+  EG R+ 
Sbjct: 189 AWCAPESLKTRTFS---HASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLP 245
Query: 115 IPPGISSHLSKLIRICMNEDPGKRPTF 141
            P      +  ++  C    P  RPTF
Sbjct: 246 RPEDCPQDIYNVMVQCWAHKPEDRPTF 272

>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2 And Jak3 Kinase Domains In Complex With Cp-690550 And Cmp-6 Length = 327

Iteration: 1
 Score = 43.5 bits (101), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 31/109 (28%), Positives = 51/109 (46%), Gaps = 17/109 (15%)
Query: 57  WMSPEALQKKPGDRNLEACDMWSFAVLLWELAT----REVPFA----------DLTPMEV 102
           W +PE+L      R     D+WSF V+L+EL T       P A          D+  +  
Sbjct: 196 WYAPESLSDNIFSRQ---SDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSR 252
Query: 103 GMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKM 151
            +++  EG R+  PP   + + +L+++C    P  RP+F  + P LD +
Sbjct: 253 LLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDML 301

>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Su11274 Length = 302

Iteration: 1
 Score = 43.5 bits (101), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 28/97 (28%), Positives = 47/97 (48%), Gaps = 9/97 (9%)
Query: 55  PAWMSPEA-----LQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVA-L 108
           P WM+PE      ++  P D      D+WS  + L E+A  E P  +L PM V +K+A  
Sbjct: 181 PYWMAPEVVMCETMKDTPYDYK---ADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKS 237
Query: 109 EGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVL 145
           +   +  P   S      ++I ++++P  RP+   +L
Sbjct: 238 DPPTLLTPSKWSVEFRDFLKIALDKNPETRPSAAQLL 274

>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With 2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic Acid ((s)-1,2,2-trimethyl-propyl)-amide Length = 314

Iteration: 1
 Score = 43.5 bits (101), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 31/109 (28%), Positives = 51/109 (46%), Gaps = 17/109 (15%)
Query: 57  WMSPEALQKKPGDRNLEACDMWSFAVLLWELAT----REVPFA----------DLTPMEV 102
           W +PE+L      R     D+WSF V+L+EL T       P A          D+  +  
Sbjct: 183 WYAPESLSDNIFSRQ---SDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGSERDVPALSR 239
Query: 103 GMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKM 151
            +++  EG R+  PP   + + +L+++C    P  RP+F  + P LD +
Sbjct: 240 LLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDML 288

>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Novel Bosutinib Isoform 1, Previously Thought To Be Bosutinib Length = 293

Iteration: 1
 Score = 43.5 bits (101), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 28/97 (28%), Positives = 47/97 (48%), Gaps = 9/97 (9%)
Query: 55  PAWMSPEA-----LQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVA-L 108
           P WM+PE      ++  P D      D+WS  + L E+A  E P  +L PM V +K+A  
Sbjct: 173 PYWMAPEVVMCETMKDTPYDYK---ADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKS 229
Query: 109 EGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVL 145
           +   +  P   S      ++I ++++P  RP+   +L
Sbjct: 230 DPPTLLTPSKWSVEFRDFLKIALDKNPETRPSAAQLL 266

>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b Length = 317

Iteration: 1
 Score = 43.1 bits (100), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 29/96 (30%), Positives = 46/96 (47%), Gaps = 9/96 (9%)
Query: 52  CYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEV--GMKVALE 109
           CY P +++PE L  +  D+   +CDMWS  V+++ L     PF   T   +  GMK  + 
Sbjct: 171 CYTPYYVAPEVLGPEKYDK---SCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIR 227
Query: 110 GLRITIP----PGISSHLSKLIRICMNEDPGKRPTF 141
             +   P      +S    +LIR+ +  DP +R T 
Sbjct: 228 LGQYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTI 263

>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated Protein Kinase-Activated Protein Kinase 3 (Mk3)-Inhibitor Complex Length = 336

Iteration: 1
 Score = 43.1 bits (100), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 29/96 (30%), Positives = 46/96 (47%), Gaps = 9/96 (9%)
Query: 52  CYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEV--GMKVALE 109
           CY P +++PE L  +  D+   +CDMWS  V+++ L     PF   T   +  GMK  + 
Sbjct: 190 CYTPYYVAPEVLGPEKYDK---SCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIR 246
Query: 110 GLRITIP----PGISSHLSKLIRICMNEDPGKRPTF 141
             +   P      +S    +LIR+ +  DP +R T 
Sbjct: 247 LGQYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTI 282

>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyrazolone Inhibitor Length = 314

Iteration: 1
 Score = 42.7 bits (99), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 28/97 (28%), Positives = 47/97 (48%), Gaps = 6/97 (6%)
Query: 57  WMSPEALQKKPGDRNLE-ACDMWSFAVLLWEL-ATREVPFADLTPMEVGMKVALEGLRIT 114
           WM+PE +     DR      D+WSF VLLWE+ +    P+  +   E   +   EG R+ 
Sbjct: 207 WMAPETIF----DRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMR 262
Query: 115 IPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKM 151
            P   +  + + +  C + +P +RPTF  ++  L  +
Sbjct: 263 APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 299

>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 3,4,5-Trimethoxy Aniline Containing Pyrimidine Length = 309

Iteration: 1
 Score = 42.7 bits (99), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 30/109 (27%), Positives = 52/109 (47%), Gaps = 7/109 (6%)
Query: 46  FQQRGRCYYP-AWMSPEALQKKPGDRNLE-ACDMWSFAVLLWEL-ATREVPFADLTPMEV 102
           + ++G    P  WM+PE +     DR      D+WSF VLLWE+ +    P+  +   E 
Sbjct: 200 YVRKGDARLPLKWMAPETIF----DRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE 255
Query: 103 GMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKM 151
             +   EG R+  P   +  + + +  C + +P +RPTF  ++  L  +
Sbjct: 256 FXRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 304

>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase Length = 342

Iteration: 1
 Score = 42.4 bits (98), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 30/104 (28%), Positives = 48/104 (46%), Gaps = 7/104 (6%)
Query: 45  SFQQRGRC-YYPA-WMSPEALQKKPGDRNLEACDMWSFAVLLWEL-ATREVPFADLTPME 101
           S+ ++G C   P  WM PEA  +          D WSF VLLWE+ +   +P+   +  E
Sbjct: 212 SYYRKGGCAMLPVKWMPPEAFME---GIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQE 268
Query: 102 VGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVL 145
           V ++    G R+  P      + +++  C    P  RP F ++L
Sbjct: 269 V-LEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIIL 311

>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase Length = 342

Iteration: 1
 Score = 42.4 bits (98), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 30/104 (28%), Positives = 48/104 (46%), Gaps = 7/104 (6%)
Query: 45  SFQQRGRC-YYPA-WMSPEALQKKPGDRNLEACDMWSFAVLLWEL-ATREVPFADLTPME 101
           S+ ++G C   P  WM PEA  +          D WSF VLLWE+ +   +P+   +  E
Sbjct: 212 SYYRKGGCAMLPVKWMPPEAFME---GIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQE 268
Query: 102 VGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVL 145
           V ++    G R+  P      + +++  C    P  RP F ++L
Sbjct: 269 V-LEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIIL 311

>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyridyl-Pyrimidine Benzimidazole Inhibitor Length = 314

Iteration: 1
 Score = 42.4 bits (98), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 28/97 (28%), Positives = 47/97 (48%), Gaps = 6/97 (6%)
Query: 57  WMSPEALQKKPGDRNLE-ACDMWSFAVLLWEL-ATREVPFADLTPMEVGMKVALEGLRIT 114
           WM+PE +     DR      D+WSF VLLWE+ +    P+  +   E   +   EG R+ 
Sbjct: 207 WMAPETIF----DRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMR 262
Query: 115 IPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKM 151
            P   +  + + +  C + +P +RPTF  ++  L  +
Sbjct: 263 APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 299

>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase ( Diphosphorylated Form) Bound To 5- Amino-3-((4-( Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide Length = 325

Iteration: 1
 Score = 42.4 bits (98), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 3/94 (3%)
Query: 55  PAWMSPEALQ-KKPGDRNLE-ACDMWSFAVLLWELATREVPFADLTPMEVGMKVA-LEGL 111
           P WM+PE +  +   DR  +   D+WS  + L E+A  E P  +L PM V +K+A  E  
Sbjct: 199 PYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPP 258
Query: 112 RITIPPGISSHLSKLIRICMNEDPGKRPTFDMVL 145
            +  P   SS+    ++ C+ ++   R T   +L
Sbjct: 259 TLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLL 292

>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With A Piperidine-Carboxamide Inhibitor Length = 333

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/104 (28%), Positives = 48/104 (46%), Gaps = 7/104 (6%)
Query: 45  SFQQRGRC-YYPA-WMSPEALQKKPGDRNLEACDMWSFAVLLWEL-ATREVPFADLTPME 101
           S+ ++G C   P  WM PEA  +          D WSF VLLWE+ +   +P+   +  E
Sbjct: 204 SYYRKGGCAMLPVKWMPPEAFME---GIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQE 260
Query: 102 VGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVL 145
           V ++    G R+  P      + +++  C    P  RP F ++L
Sbjct: 261 V-LEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIIL 303

>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone Morp Protein Receptor Type-1b (Bmpr1b) In Complex With Fkbp12 An 193189 Length = 337

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 38/149 (25%), Positives = 60/149 (40%), Gaps = 23/149 (15%)
Query: 26  CCQIDEDLTARINMADAQFSFQQRGRCYYPAWMSPEALQKKPGDRNLEA---CDMWSFAV 82
           CC  D  L  +      +       R     +M PE L +     + ++    DM+SF +
Sbjct: 181 CCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGL 240
Query: 83  LLWELATR----------EVPFADLTPMEVGMK-----VALEGLRITIPPGISS-----H 122
           +LWE+A R          ++P+ DL P +   +     V ++ LR + P   SS      
Sbjct: 241 ILWEVARRCVSGGIVEEYQLPYHDLVPSDPSYEDMREIVCIKKLRPSFPNRWSSDECLRQ 300
Query: 123 LSKLIRICMNEDPGKRPTFDMVLPILDKM 151
           + KL+  C   +P  R T   V   L KM
Sbjct: 301 MGKLMTECWAHNPASRLTALRVKKTLAKM 329

>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded Form) Length = 325

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 3/94 (3%)
Query: 55  PAWMSPEALQ-KKPGDRNLE-ACDMWSFAVLLWELATREVPFADLTPMEVGMKVA-LEGL 111
           P WM+PE +  +   DR  +   D+WS  + L E+A  E P  +L PM V +K+A  E  
Sbjct: 199 PYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPP 258
Query: 112 RITIPPGISSHLSKLIRICMNEDPGKRPTFDMVL 145
            +  P   SS+    ++ C+ ++   R T   +L
Sbjct: 259 TLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLL 292

>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5- Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide Length = 325

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 3/94 (3%)
Query: 55  PAWMSPEALQ-KKPGDRNLE-ACDMWSFAVLLWELATREVPFADLTPMEVGMKVA-LEGL 111
           P WM+PE +  +   DR  +   D+WS  + L E+A  E P  +L PM V +K+A  E  
Sbjct: 199 PYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPP 258
Query: 112 RITIPPGISSHLSKLIRICMNEDPGKRPTFDMVL 145
            +  P   SS+    ++ C+ ++   R T   +L
Sbjct: 259 TLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLL 292

>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma Kinase Catalytic Domain Length = 327

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/104 (28%), Positives = 48/104 (46%), Gaps = 7/104 (6%)
Query: 45  SFQQRGRC-YYPA-WMSPEALQKKPGDRNLEACDMWSFAVLLWEL-ATREVPFADLTPME 101
           S+ ++G C   P  WM PEA  +          D WSF VLLWE+ +   +P+   +  E
Sbjct: 198 SYYRKGGCAMLPVKWMPPEAFME---GIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQE 254
Query: 102 VGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVL 145
           V ++    G R+  P      + +++  C    P  RP F ++L
Sbjct: 255 V-LEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIIL 297

>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Ch5424802 Length = 344

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/104 (28%), Positives = 48/104 (46%), Gaps = 7/104 (6%)
Query: 45  SFQQRGRC-YYPA-WMSPEALQKKPGDRNLEACDMWSFAVLLWEL-ATREVPFADLTPME 101
           S+ ++G C   P  WM PEA  +          D WSF VLLWE+ +   +P+   +  E
Sbjct: 214 SYYRKGGCAMLPVKWMPPEAFME---GIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQE 270
Query: 102 VGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVL 145
           V ++    G R+  P      + +++  C    P  RP F ++L
Sbjct: 271 V-LEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIIL 313

>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase Length = 342

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/104 (28%), Positives = 48/104 (46%), Gaps = 7/104 (6%)
Query: 45  SFQQRGRC-YYPA-WMSPEALQKKPGDRNLEACDMWSFAVLLWEL-ATREVPFADLTPME 101
           S+ ++G C   P  WM PEA  +          D WSF VLLWE+ +   +P+   +  E
Sbjct: 212 SYYRKGGCAMLPVKWMPPEAFME---GIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQE 268
Query: 102 VGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVL 145
           V ++    G R+  P      + +++  C    P  RP F ++L
Sbjct: 269 V-LEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIIL 311

>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Piperidine-Carboxamide Inhibitor 2 Length = 327

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/104 (28%), Positives = 48/104 (46%), Gaps = 7/104 (6%)
Query: 45  SFQQRGRC-YYPA-WMSPEALQKKPGDRNLEACDMWSFAVLLWEL-ATREVPFADLTPME 101
           S+ ++G C   P  WM PEA  +          D WSF VLLWE+ +   +P+   +  E
Sbjct: 198 SYYRKGGCAMLPVKWMPPEAFME---GIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQE 254
Query: 102 VGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVL 145
           V ++    G R+  P      + +++  C    P  RP F ++L
Sbjct: 255 V-LEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIIL 297

>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma Kinase Catalytic Domain Length = 327

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/104 (28%), Positives = 48/104 (46%), Gaps = 7/104 (6%)
Query: 45  SFQQRGRC-YYPA-WMSPEALQKKPGDRNLEACDMWSFAVLLWEL-ATREVPFADLTPME 101
           S+ ++G C   P  WM PEA  +          D WSF VLLWE+ +   +P+   +  E
Sbjct: 198 SYYRKGGCAMLPVKWMPPEAFME---GIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQE 254
Query: 102 VGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVL 145
           V ++    G R+  P      + +++  C    P  RP F ++L
Sbjct: 255 V-LEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIIL 297

>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyridinyl-Triazine Inhibitor Length = 314

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/97 (28%), Positives = 47/97 (48%), Gaps = 6/97 (6%)
Query: 57  WMSPEALQKKPGDRNLE-ACDMWSFAVLLWEL-ATREVPFADLTPMEVGMKVALEGLRIT 114
           WM+PE +     DR      D+WSF VLLWE+ +    P+  +   E   +   EG R+ 
Sbjct: 207 WMAPETIF----DRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMR 262
Query: 115 IPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKM 151
            P   +  + + +  C + +P +RPTF  ++  L  +
Sbjct: 263 APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 299

>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Back Pocket Binder Length = 368

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/97 (28%), Positives = 47/97 (48%), Gaps = 6/97 (6%)
Query: 57  WMSPEALQKKPGDRNLE-ACDMWSFAVLLWEL-ATREVPFADLTPMEVGMKVALEGLRIT 114
           WM+PE +     DR      D+WSF VLLWE+ +    P+  +   E   +   EG R+ 
Sbjct: 268 WMAPETIF----DRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMR 323
Query: 115 IPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKM 151
            P   +  + + +  C + +P +RPTF  ++  L  +
Sbjct: 324 APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 360

>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In Complex With Acyliminobenzimidazole Inhibitor 1 Length = 353

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/104 (28%), Positives = 48/104 (46%), Gaps = 7/104 (6%)
Query: 45  SFQQRGRC-YYPA-WMSPEALQKKPGDRNLEACDMWSFAVLLWEL-ATREVPFADLTPME 101
           S+ ++G C   P  WM PEA  +          D WSF VLLWE+ +   +P+   +  E
Sbjct: 224 SYYRKGGCAMLPVKWMPPEAFME---GIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQE 280
Query: 102 VGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVL 145
           V ++    G R+  P      + +++  C    P  RP F ++L
Sbjct: 281 V-LEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIIL 323

>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A Novel Pyrrolopyrimidine Inhibitor Length = 359

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/97 (28%), Positives = 47/97 (48%), Gaps = 6/97 (6%)
Query: 57  WMSPEALQKKPGDRNLE-ACDMWSFAVLLWEL-ATREVPFADLTPMEVGMKVALEGLRIT 114
           WM+PE +     DR      D+WSF VLLWE+ +    P+  +   E   +   EG R+ 
Sbjct: 261 WMAPETIF----DRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMR 316
Query: 115 IPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKM 151
            P   +  + + +  C + +P +RPTF  ++  L  +
Sbjct: 317 APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 353

>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With Compound A Length = 356

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/97 (28%), Positives = 47/97 (48%), Gaps = 6/97 (6%)
Query: 57  WMSPEALQKKPGDRNLE-ACDMWSFAVLLWEL-ATREVPFADLTPMEVGMKVALEGLRIT 114
           WM+PE +     DR      D+WSF VLLWE+ +    P+  +   E   +   EG R+ 
Sbjct: 259 WMAPETIF----DRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMR 314
Query: 115 IPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKM 151
            P   +  + + +  C + +P +RPTF  ++  L  +
Sbjct: 315 APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 351

>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 2-Anilino-5-Aryl-Oxazole Inhibitor Length = 366

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/97 (28%), Positives = 47/97 (48%), Gaps = 6/97 (6%)
Query: 57  WMSPEALQKKPGDRNLE-ACDMWSFAVLLWEL-ATREVPFADLTPMEVGMKVALEGLRIT 114
           WM+PE +     DR      D+WSF VLLWE+ +    P+  +   E   +   EG R+ 
Sbjct: 266 WMAPETIF----DRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMR 321
Query: 115 IPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKM 151
            P   +  + + +  C + +P +RPTF  ++  L  +
Sbjct: 322 APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 358

>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex With Nvp- Tae684 Length = 315

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/104 (28%), Positives = 48/104 (46%), Gaps = 7/104 (6%)
Query: 45  SFQQRGRC-YYPA-WMSPEALQKKPGDRNLEACDMWSFAVLLWEL-ATREVPFADLTPME 101
           S+ ++G C   P  WM PEA  +          D WSF VLLWE+ +   +P+   +  E
Sbjct: 189 SYYRKGGCAMLPVKWMPPEAFME---GIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQE 245
Query: 102 VGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVL 145
           V ++    G R+  P      + +++  C    P  RP F ++L
Sbjct: 246 V-LEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIIL 288

>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In Complex With Crizotinib (Pf-02341066) Length = 327

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/104 (28%), Positives = 48/104 (46%), Gaps = 7/104 (6%)
Query: 45  SFQQRGRC-YYPA-WMSPEALQKKPGDRNLEACDMWSFAVLLWEL-ATREVPFADLTPME 101
           S+ ++G C   P  WM PEA  +          D WSF VLLWE+ +   +P+   +  E
Sbjct: 197 SYYRKGGCAMLPVKWMPPEAFME---GIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQE 253
Query: 102 VGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVL 145
           V ++    G R+  P      + +++  C    P  RP F ++L
Sbjct: 254 V-LEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIIL 296

>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Nicotinamide Inhibitor Length = 314

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/97 (28%), Positives = 47/97 (48%), Gaps = 6/97 (6%)
Query: 57  WMSPEALQKKPGDRNLE-ACDMWSFAVLLWEL-ATREVPFADLTPMEVGMKVALEGLRIT 114
           WM+PE +     DR      D+WSF VLLWE+ +    P+  +   E   +   EG R+ 
Sbjct: 207 WMAPETIF----DRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMR 262
Query: 115 IPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKM 151
            P   +  + + +  C + +P +RPTF  ++  L  +
Sbjct: 263 APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 299

>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In Complex With Crizotinib Length = 327

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 30/104 (28%), Positives = 48/104 (46%), Gaps = 7/104 (6%)
Query: 45  SFQQRGRC-YYPA-WMSPEALQKKPGDRNLEACDMWSFAVLLWEL-ATREVPFADLTPME 101
           S+ ++G C   P  WM PEA  +          D WSF VLLWE+ +   +P+   +  E
Sbjct: 197 SYYRKGGCAMLPVKWMPPEAFME---GIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQE 253
Query: 102 VGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVL 145
           V ++    G R+  P      + +++  C    P  RP F ++L
Sbjct: 254 V-LEFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIIL 296

>pdb|1RJB|A Chain A, Crystal Structure Of Flt3 Length = 344

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/109 (28%), Positives = 56/109 (51%), Gaps = 7/109 (6%)
Query: 35  ARINMADAQFSFQQRGRCYYPA-WMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVP 93
           AR  M+D+ +    RG    P  WM+PE+L +  G   +++ D+WS+ +LLWE+ +  V 
Sbjct: 219 ARDIMSDSNYVV--RGNARLPVKWMAPESLFE--GIYTIKS-DVWSYGILLWEIFSLGVN 273
Query: 94  FADLTPMEVGM-KVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTF 141
                P++    K+   G ++  P   +  +  +++ C   D  KRP+F
Sbjct: 274 PYPGIPVDANFYKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSF 322

>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy) Quinolin-4-Yloxy)benzofuran-3-Carboxamide) Length = 316

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/97 (28%), Positives = 47/97 (48%), Gaps = 6/97 (6%)
Query: 57  WMSPEALQKKPGDRNLE-ACDMWSFAVLLWEL-ATREVPFADLTPMEVGMKVALEGLRIT 114
           WM+PE +     DR      D+WSF VLLWE+ +    P+  +   E   +   EG R+ 
Sbjct: 216 WMAPETI----FDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMR 271
Query: 115 IPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKM 151
            P   +  + + +  C + +P +RPTF  ++  L  +
Sbjct: 272 APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 308

>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2 With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 318

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/97 (28%), Positives = 47/97 (48%), Gaps = 6/97 (6%)
Query: 57  WMSPEALQKKPGDRNLE-ACDMWSFAVLLWEL-ATREVPFADLTPMEVGMKVALEGLRIT 114
           WM+PE +     DR      D+WSF VLLWE+ +    P+  +   E   +   EG R+ 
Sbjct: 218 WMAPETIF----DRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMR 273
Query: 115 IPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKM 151
            P   +  + + +  C + +P +RPTF  ++  L  +
Sbjct: 274 APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 310

>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 269

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 34/129 (26%), Positives = 64/129 (49%), Gaps = 11/129 (8%)
Query: 29  IDEDLTARIN---MADAQFSFQQRGRCYYPA-WMSPEALQKKPGDRNLEACDMWSFAVLL 84
           + ED  A+++   +     S Q  G+   P  W +PEAL++          D+WSF +LL
Sbjct: 141 VSEDNVAKVSDFGLTKEASSTQDTGKL--PVKWTAPEALREAAFSTK---SDVWSFGILL 195
Query: 85  WELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDM 143
           WE+ +   VP+  +   +V  +V  +G ++  P G    + ++++ C + D   RP+F  
Sbjct: 196 WEIYSFGRVPYPRIPLKDVVPRVE-KGYKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQ 254
Query: 144 VLPILDKMK 152
           +   L+ +K
Sbjct: 255 LREQLEHIK 263

>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase Domains) In Complex With Axitinib (Ag-013736) (N-Methyl-2-( 3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)- Benzamide) Length = 353

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/97 (28%), Positives = 47/97 (48%), Gaps = 6/97 (6%)
Query: 57  WMSPEALQKKPGDRNLE-ACDMWSFAVLLWEL-ATREVPFADLTPMEVGMKVALEGLRIT 114
           WM+PE +     DR      D+WSF VLLWE+ +    P+  +   E   +   EG R+ 
Sbjct: 253 WMAPETIF----DRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMR 308
Query: 115 IPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKM 151
            P   +  + + +  C + +P +RPTF  ++  L  +
Sbjct: 309 APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 345

>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 3,4,5-Trimethoxy Aniline Containing Pyrimidine Length = 309

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/97 (28%), Positives = 47/97 (48%), Gaps = 6/97 (6%)
Query: 57  WMSPEALQKKPGDRNLE-ACDMWSFAVLLWEL-ATREVPFADLTPMEVGMKVALEGLRIT 114
           WM+PE +     DR      D+WSF VLLWE+ +    P+  +   E   +   EG R+ 
Sbjct: 212 WMAPETIF----DRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMR 267
Query: 115 IPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKM 151
            P   +  + + +  C + +P +RPTF  ++  L  +
Sbjct: 268 APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 304

>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr) Kinase Domain Length = 316

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/97 (28%), Positives = 47/97 (48%), Gaps = 6/97 (6%)
Query: 57  WMSPEALQKKPGDRNLE-ACDMWSFAVLLWEL-ATREVPFADLTPMEVGMKVALEGLRIT 114
           WM+PE +     DR      D+WSF VLLWE+ +    P+  +   E   +   EG R+ 
Sbjct: 216 WMAPETIF----DRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMR 271
Query: 115 IPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKM 151
            P   +  + + +  C + +P +RPTF  ++  L  +
Sbjct: 272 APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 308

>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea Inhibitor Length = 316

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/97 (28%), Positives = 47/97 (48%), Gaps = 6/97 (6%)
Query: 57  WMSPEALQKKPGDRNLE-ACDMWSFAVLLWEL-ATREVPFADLTPMEVGMKVALEGLRIT 114
           WM+PE +     DR      D+WSF VLLWE+ +    P+  +   E   +   EG R+ 
Sbjct: 216 WMAPETIF----DRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMR 271
Query: 115 IPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKM 151
            P   +  + + +  C + +P +RPTF  ++  L  +
Sbjct: 272 APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 308

>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site Inhibitor Showing High Selectivity Within The Janus Kinase Family Length = 315

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/109 (28%), Positives = 51/109 (46%), Gaps = 17/109 (15%)
Query: 57  WMSPEALQKKPGDRNLEACDMWSFAVLLWELAT----REVPFA----------DLTPMEV 102
           W +PE+L      R     D+WSF V+L+EL T       P A          D+  +  
Sbjct: 184 WYAPESLSDNIFSRQ---SDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALCR 240
Query: 103 GMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKM 151
            +++  EG R+  PP   + + +L+++C    P  RP+F  + P LD +
Sbjct: 241 LLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDML 289

>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine Kinase Length = 277

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/86 (36%), Positives = 44/86 (51%), Gaps = 5/86 (5%)
Query: 57  WMSPEALQKKPGDRNLEACDMWSFAVLLWE-LATREVPFADLTPMEVGMKVALEGLRITI 115
           WMSPE++  +   R   A D+W FAV +WE L+  + PF  L   +V + V  +G R+  
Sbjct: 176 WMSPESINFR---RFTTASDVWMFAVCMWEILSFGKQPFFWLENKDV-IGVLEKGDRLPK 231
Query: 116 PPGISSHLSKLIRICMNEDPGKRPTF 141
           P      L  L+  C + DP  RP F
Sbjct: 232 PDLCPPVLYTLMTRCWDYDPSDRPRF 257

>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a Length = 293

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/86 (36%), Positives = 44/86 (51%), Gaps = 5/86 (5%)
Query: 57  WMSPEALQKKPGDRNLEACDMWSFAVLLWE-LATREVPFADLTPMEVGMKVALEGLRITI 115
           WMSPE++  +   R   A D+W FAV +WE L+  + PF  L   +V + V  +G R+  
Sbjct: 192 WMSPESINFR---RFTTASDVWMFAVCMWEILSFGKQPFFWLENKDV-IGVLEKGDRLPK 247
Query: 116 PPGISSHLSKLIRICMNEDPGKRPTF 141
           P      L  L+  C + DP  RP F
Sbjct: 248 PDLCPPVLYTLMTRCWDYDPSDRPRF 273

>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel 4-amino-furo[2,3-d]pyrimidine Length = 316

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 28/97 (28%), Positives = 47/97 (48%), Gaps = 6/97 (6%)
Query: 57  WMSPEALQKKPGDRNLE-ACDMWSFAVLLWEL-ATREVPFADLTPMEVGMKVALEGLRIT 114
           WM+PE +     DR      D+WSF VLLWE+ +    P+  +   E   +   EG R+ 
Sbjct: 216 WMAPETIF----DRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMR 271
Query: 115 IPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKM 151
            P   +  + + +  C + +P +RPTF  ++  L  +
Sbjct: 272 APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 308

>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine Kinase 2 Beta (ptk2b) Length = 281

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/86 (36%), Positives = 44/86 (51%), Gaps = 5/86 (5%)
Query: 57  WMSPEALQKKPGDRNLEACDMWSFAVLLWE-LATREVPFADLTPMEVGMKVALEGLRITI 115
           WMSPE++  +   R   A D+W FAV +WE L+  + PF  L   +V + V  +G R+  
Sbjct: 180 WMSPESINFR---RFTTASDVWMFAVCMWEILSFGKQPFFWLENKDV-IGVLEKGDRLPK 235
Query: 116 PPGISSHLSKLIRICMNEDPGKRPTF 141
           P      L  L+  C + DP  RP F
Sbjct: 236 PDLCPPVLYTLMTRCWDYDPSDRPRF 261

>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein Kinase Kinase 7 Activated Mutant (S287d, T291d) Length = 318

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/101 (32%), Positives = 50/101 (49%), Gaps = 18/101 (17%)
Query: 56  AWMSPEALQ----KKPGDRNLEACDMWSFAVLLWELATREVPFADL-TPMEVGMKVALEG 110
           A+M+PE +      KP D ++ A D+WS  + L ELAT + P+ +  T  EV  KV  E 
Sbjct: 189 AYMAPERIDPPDPTKP-DYDIRA-DVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEE 246
Query: 111 LRITIPP------GISSHLSKLIRICMNEDPGKRPTFDMVL 145
                PP      G S      ++ C+ +D  KRP ++ +L
Sbjct: 247 -----PPLLPGHMGFSGDFQSFVKDCLTKDHRKRPKYNKLL 282

>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120 Length = 316

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 28/97 (28%), Positives = 47/97 (48%), Gaps = 6/97 (6%)
Query: 57  WMSPEALQKKPGDRNLE-ACDMWSFAVLLWEL-ATREVPFADLTPMEVGMKVALEGLRIT 114
           WM+PE +     DR      D+WSF VLLWE+ +    P+  +   E   +   EG R+ 
Sbjct: 216 WMAPETIF----DRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMR 271
Query: 115 IPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKM 151
            P   +  + + +  C + +P +RPTF  ++  L  +
Sbjct: 272 APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 308

>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex With The Imidazo[1,2-B]pyridazine Inhibitor K00135 Length = 301

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/139 (25%), Positives = 60/139 (43%), Gaps = 25/139 (17%)
Query: 26  CCQIDEDLTARINMADAQFSFQQRGRCYYPAWMSPEALQKKPGDRNLEA---CDMWSFAV 82
           CC  D  L    + +  Q       R     +M+PE L +       ++    D+W+F +
Sbjct: 152 CCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGL 211
Query: 83  LLWELATREV----------PFADLTPMEVGMK-----VALEGLRITIP------PGISS 121
           +LWE+A R V          PF D+ P +   +     V ++  R  IP      P ++S
Sbjct: 212 VLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTS 271
Query: 122 HLSKLIRICMNEDPGKRPT 140
            L+KL++ C  ++P  R T
Sbjct: 272 -LAKLMKECWYQNPSARLT 289

>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720 Length = 280

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 21/104 (20%), Positives = 57/104 (54%), Gaps = 10/104 (9%)
Query: 57  WMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIP 116
           WM+PE ++ +  +      D+++F ++L+EL T ++P++++   +  +++   G   ++ 
Sbjct: 176 WMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRG---SLS 232
Query: 117 PGIS-------SHLSKLIRICMNEDPGKRPTFDMVLPILDKMKR 153
           P +S         + +L+  C+ +   +RP+F  +L  ++++ R
Sbjct: 233 PDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELAR 276

>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx4032 Length = 289

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 21/104 (20%), Positives = 57/104 (54%), Gaps = 10/104 (9%)
Query: 57  WMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIP 116
           WM+PE ++ +  +      D+++F ++L+EL T ++P++++   +  +++   G   ++ 
Sbjct: 188 WMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRG---SLS 244
Query: 117 PGIS-------SHLSKLIRICMNEDPGKRPTFDMVLPILDKMKR 153
           P +S         + +L+  C+ +   +RP+F  +L  ++++ R
Sbjct: 245 PDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELAR 288

>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With N-(4-chlorophenyl)-2- ((pyridin-4-ylmethyl)amino)benzamide Length = 360

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/86 (29%), Positives = 43/86 (50%), Gaps = 4/86 (4%)
Query: 57  WMSPEALQKKPGDRNLEACDMWSFAVLLWEL-ATREVPFADLTPMEVGMKVALEGLRITI 115
           WM+PE++  K         D+WS+ VLLWE+ +    P+  +   E       EG+R+  
Sbjct: 267 WMAPESIFDKIYSTK---SDVWSYGVLLWEIFSLGGSPYPGVQMDEDFCSRLREGMRMRA 323
Query: 116 PPGISSHLSKLIRICMNEDPGKRPTF 141
           P   +  + +++  C + DP +RP F
Sbjct: 324 PEYSTPEIYQIMLDCWHRDPKERPRF 349

>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2- Aminopyridine Inhibitor Length = 301

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/139 (25%), Positives = 60/139 (43%), Gaps = 25/139 (17%)
Query: 26  CCQIDEDLTARINMADAQFSFQQRGRCYYPAWMSPEALQKKPGDRNLEA---CDMWSFAV 82
           CC  D  L    + +  Q       R     +M+PE L +       ++    D+W+F +
Sbjct: 152 CCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGL 211
Query: 83  LLWELATREV----------PFADLTPMEVGMK-----VALEGLRITIP------PGISS 121
           +LWE+A R V          PF D+ P +   +     V ++  R  IP      P ++S
Sbjct: 212 VLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTS 271
Query: 122 HLSKLIRICMNEDPGKRPT 140
            L+KL++ C  ++P  R T
Sbjct: 272 -LAKLMKECWYQNPSARLT 289

>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2 And Jak3 Kinase Domains In Complex With Cp-690550 And Cmp-6 Length = 318

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/106 (28%), Positives = 47/106 (44%), Gaps = 17/106 (16%)
Query: 57  WMSPEALQKKPGDRNLEACDMWSFAVLLWELATR-------EVPFADLTPMEVGMKVALE 109
           W +PE L++    +   A D+WSF V L+EL T           F +L  +  G    L 
Sbjct: 203 WYAPECLKEY---KFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLR 259
Query: 110 -------GLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPIL 148
                  G R+  P    + +  L++ C   +   RPTF+ ++PIL
Sbjct: 260 LTELLERGERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPIL 305

>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase Catalytic Domain Length = 367

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/90 (28%), Positives = 41/90 (45%), Gaps = 5/90 (5%)
Query: 57  WMSPEALQKKPGDRNLEACDMWSFAVLLWEL-ATREVPFADLTPMEVGMKVALEGLRITI 115
           WM PEA  +          D WSF VLLWE+ +   +P+   +  EV ++    G R+  
Sbjct: 252 WMPPEAFME---GIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEV-LEFVTSGGRMDP 307
Query: 116 PPGISSHLSKLIRICMNEDPGKRPTFDMVL 145
           P      + +++  C    P  RP F ++L
Sbjct: 308 PKNCPGPVYRIMTQCWQHQPEDRPNFAIIL 337

>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase Catalytic Domain Length = 344

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 26/90 (28%), Positives = 41/90 (45%), Gaps = 5/90 (5%)
Query: 57  WMSPEALQKKPGDRNLEACDMWSFAVLLWEL-ATREVPFADLTPMEVGMKVALEGLRITI 115
           WM PEA  +          D WSF VLLWE+ +   +P+   +  EV ++    G R+  
Sbjct: 229 WMPPEAFME---GIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEV-LEFVTSGGRMDP 284
Query: 116 PPGISSHLSKLIRICMNEDPGKRPTFDMVL 145
           P      + +++  C    P  RP F ++L
Sbjct: 285 PKNCPGPVYRIMTQCWQHQPEDRPNFAIIL 314

>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx3203 Length = 292

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 21/104 (20%), Positives = 57/104 (54%), Gaps = 10/104 (9%)
Query: 57  WMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIP 116
           WM+PE ++ +  +      D+++F ++L+EL T ++P++++   +  +++   G   ++ 
Sbjct: 188 WMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRG---SLS 244
Query: 117 PGIS-------SHLSKLIRICMNEDPGKRPTFDMVLPILDKMKR 153
           P +S         + +L+  C+ +   +RP+F  +L  ++++ R
Sbjct: 245 PDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELAR 288

>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin Length = 330

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/139 (25%), Positives = 60/139 (43%), Gaps = 25/139 (17%)
Query: 26  CCQIDEDLTARINMADAQFSFQQRGRCYYPAWMSPEALQKKPGDRNLEA---CDMWSFAV 82
           CC  D  L    + +  Q       R     +M+PE L +       ++    D+W+F +
Sbjct: 181 CCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGL 240
Query: 83  LLWELATREV----------PFADLTPMEVGMK-----VALEGLRITIP------PGISS 121
           +LWE+A R V          PF D+ P +   +     V ++  R  IP      P ++S
Sbjct: 241 VLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTS 300
Query: 122 HLSKLIRICMNEDPGKRPT 140
            L+KL++ C  ++P  R T
Sbjct: 301 -LAKLMKECWYQNPSARLT 318

>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a Double Mutant Length = 328

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/150 (28%), Positives = 67/150 (44%), Gaps = 22/150 (14%)
Query: 14  SKKSKTSNAFLFCCQ---IDEDLTAR---------INMADAQFS--FQQRGR----CYYP 55
           SK  +  +A  +C Q   +  DL A          I +AD  FS  F   G+    C  P
Sbjct: 118 SKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDAFCGAP 177
Query: 56  AWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITI 115
            + +PE  Q K  D      D+WS  V+L+ L +  +PF      E+  +V L G +  I
Sbjct: 178 PYAAPELFQGKKYDG--PEVDVWSLGVILYTLVSGSLPFDGQNLKELRERV-LRG-KYRI 233
Query: 116 PPGISSHLSKLIRICMNEDPGKRPTFDMVL 145
           P  +S+    L++  +  +P KR T + ++
Sbjct: 234 PFYMSTDCENLLKRFLVLNPIKRGTLEQIM 263

>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex With A Staurosporine Analogue Length = 290

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/109 (28%), Positives = 51/109 (46%), Gaps = 17/109 (15%)
Query: 57  WMSPEALQKKPGDRNLEACDMWSFAVLLWELAT----REVPFA----------DLTPMEV 102
           W +PE+L      R     D+WSF V+L+EL T       P A          D+  +  
Sbjct: 180 WYAPESLSDNIFSRQ---SDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALCR 236
Query: 103 GMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKM 151
            +++  EG R+  PP   + + +L+++C    P  RP+F  + P LD +
Sbjct: 237 LLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDML 285

>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536 Length = 294

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/133 (26%), Positives = 57/133 (42%), Gaps = 15/133 (11%)
Query: 18  KTSNAFLFCCQIDEDLTARINMADAQFSFQQRGR-----CYYPAWMSPEALQKKPGDRNL 72
           K  N FL     +EDL  +I         +  G      C  P +++PE L KK    + 
Sbjct: 142 KLGNLFL-----NEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKK--GHSF 194
Query: 73  EACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMN 132
           E  D+WS   +++ L   + PF      E  +++       +IP  I+   + LI+  + 
Sbjct: 195 EV-DVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKN--EYSIPKHINPVAASLIQKMLQ 251
Query: 133 EDPGKRPTFDMVL 145
            DP  RPT + +L
Sbjct: 252 TDPTARPTINELL 264

>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: T208aS212A INACTIVE DOUBLE MUTANT Length = 327

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 54/121 (44%), Gaps = 12/121 (9%)
Query: 33  LTARINMADAQFSFQQR--------GRCYYPAWMSPEALQKKPGDRNLEACDMWSFAVLL 84
           L A +N+  A F F             C  P + +PE  Q K  D      D+WS  V+L
Sbjct: 146 LDADMNIKIADFGFSNEFTFGNKLDAFCGAPPYAAPELFQGKKYDG--PEVDVWSLGVIL 203
Query: 85  WELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMV 144
           + L +  +PF      E+  +V L G +  IP  +S+    L++  +  +P KR T + +
Sbjct: 204 YTLVSGSLPFDGQNLKELRERV-LRG-KYRIPFYMSTDCENLLKKFLILNPSKRGTLEQI 261
Query: 145 L 145
           +
Sbjct: 262 M 262

>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 311

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/133 (26%), Positives = 57/133 (42%), Gaps = 15/133 (11%)
Query: 18  KTSNAFLFCCQIDEDLTARINMADAQFSFQQRGR-----CYYPAWMSPEALQKKPGDRNL 72
           K  N FL     +EDL  +I         +  G      C  P +++PE L KK    + 
Sbjct: 144 KLGNLFL-----NEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKK--GHSF 196
Query: 73  EACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMN 132
           E  D+WS   +++ L   + PF      E  +++       +IP  I+   + LI+  + 
Sbjct: 197 EV-DVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKN--EYSIPKHINPVAASLIQKMLQ 253
Query: 133 EDPGKRPTFDMVL 145
            DP  RPT + +L
Sbjct: 254 TDPTARPTINELL 266

>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With Nms-P937 Length = 311

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/133 (26%), Positives = 57/133 (42%), Gaps = 15/133 (11%)
Query: 18  KTSNAFLFCCQIDEDLTARINMADAQFSFQQRGR-----CYYPAWMSPEALQKKPGDRNL 72
           K  N FL     +EDL  +I         +  G      C  P +++PE L KK    + 
Sbjct: 144 KLGNLFL-----NEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKK--GHSF 196
Query: 73  EACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMN 132
           E  D+WS   +++ L   + PF      E  +++       +IP  I+   + LI+  + 
Sbjct: 197 EV-DVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKN--EYSIPKHINPVAASLIQKMLQ 253
Query: 133 EDPGKRPTFDMVL 145
            DP  RPT + +L
Sbjct: 254 TDPTARPTINELL 266

>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A Benzolactam-Derived Inhibitor Length = 333

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/133 (26%), Positives = 57/133 (42%), Gaps = 15/133 (11%)
Query: 18  KTSNAFLFCCQIDEDLTARINMADAQFSFQQRGR-----CYYPAWMSPEALQKKPGDRNL 72
           K  N FL     +EDL  +I         +  G      C  P +++PE L KK    + 
Sbjct: 166 KLGNLFL-----NEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKK--GHSF 218
Query: 73  EACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMN 132
           E  D+WS   +++ L   + PF      E  +++       +IP  I+   + LI+  + 
Sbjct: 219 EV-DVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKN--EYSIPKHINPVAASLIQKMLQ 275
Query: 133 EDPGKRPTFDMVL 145
            DP  RPT + +L
Sbjct: 276 TDPTARPTINELL 288

>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like Kinase 1 Length = 335

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/133 (26%), Positives = 57/133 (42%), Gaps = 15/133 (11%)
Query: 18  KTSNAFLFCCQIDEDLTARINMADAQFSFQQRGR-----CYYPAWMSPEALQKKPGDRNL 72
           K  N FL     +EDL  +I         +  G      C  P +++PE L KK    + 
Sbjct: 168 KLGNLFL-----NEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKK--GHSF 220
Query: 73  EACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMN 132
           E  D+WS   +++ L   + PF      E  +++       +IP  I+   + LI+  + 
Sbjct: 221 EV-DVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKN--EYSIPKHINPVAASLIQKMLQ 277
Query: 133 EDPGKRPTFDMVL 145
            DP  RPT + +L
Sbjct: 278 TDPTARPTINELL 290

>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In Complex With A Selective Darpin Length = 315

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/133 (26%), Positives = 57/133 (42%), Gaps = 15/133 (11%)
Query: 18  KTSNAFLFCCQIDEDLTARINMADAQFSFQQRGR-----CYYPAWMSPEALQKKPGDRNL 72
           K  N FL     +EDL  +I         +  G      C  P +++PE L KK    + 
Sbjct: 148 KLGNLFL-----NEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKK--GHSF 200
Query: 73  EACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMN 132
           E  D+WS   +++ L   + PF      E  +++       +IP  I+   + LI+  + 
Sbjct: 201 EV-DVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKN--EYSIPKHINPVAASLIQKMLQ 257
Query: 133 EDPGKRPTFDMVL 145
            DP  RPT + +L
Sbjct: 258 TDPTARPTINELL 270

>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1 Length = 328

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/150 (28%), Positives = 67/150 (44%), Gaps = 22/150 (14%)
Query: 14  SKKSKTSNAFLFCCQ---IDEDLTAR---------INMADAQFS--FQQRGR----CYYP 55
           SK  +  +A  +C Q   +  DL A          I +AD  FS  F   G+    C  P
Sbjct: 115 SKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDTFCGSP 174
Query: 56  AWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITI 115
            + +PE  Q K  D      D+WS  V+L+ L +  +PF      E+  +V L G +  I
Sbjct: 175 PYAAPELFQGKKYDG--PEVDVWSLGVILYTLVSGSLPFDGQNLKELRERV-LRG-KYRI 230
Query: 116 PPGISSHLSKLIRICMNEDPGKRPTFDMVL 145
           P  +S+    L++  +  +P KR T + ++
Sbjct: 231 PFYMSTDCENLLKRFLVLNPIKRGTLEQIM 260

>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 302

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/106 (28%), Positives = 46/106 (43%), Gaps = 17/106 (16%)
Query: 57  WMSPEALQKKPGDRNLEACDMWSFAVLLWELATR-------EVPFADLTPMEVGMKVALE 109
           W +PE L++    +   A D+WSF V L+EL T           F +L  +  G    L 
Sbjct: 186 WYAPECLKEY---KFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLR 242
Query: 110 -------GLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPIL 148
                  G R+  P      +  L++ C   +   RPTF+ ++PIL
Sbjct: 243 LTELLERGERLPRPDKCPCEVYHLMKNCWETEASFRPTFENLIPIL 288

>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer Length = 406

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 9/96 (9%)
Query: 52  CYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEV--GMKVALE 109
           CY P +++PE L  +  D+   +CDMWS  V+++ L     PF     + +  GMK  + 
Sbjct: 230 CYTPYYVAPEVLGPEKYDK---SCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIR 286
Query: 110 GLRITIP----PGISSHLSKLIRICMNEDPGKRPTF 141
             +   P      +S  +  LIR  +  +P +R T 
Sbjct: 287 MGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTI 322

>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-Thiadiazole- Thiophene Inhibitor Length = 302

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/106 (28%), Positives = 46/106 (43%), Gaps = 17/106 (16%)
Query: 57  WMSPEALQKKPGDRNLEACDMWSFAVLLWELATR-------EVPFADLTPMEVGMKVALE 109
           W +PE L++    +   A D+WSF V L+EL T           F +L  +  G    L 
Sbjct: 186 WYAPECLKEY---KFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLR 242
Query: 110 -------GLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPIL 148
                  G R+  P      +  L++ C   +   RPTF+ ++PIL
Sbjct: 243 LTELLERGERLPRPDKCPCEVYHLMKNCWETEASFRPTFENLIPIL 288

>pdb|2OZA|A Chain A, Structure Of P38alpha Complex Length = 356

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 9/96 (9%)
Query: 52  CYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEV--GMKVALE 109
           CY P +++PE L  +  D+   +CDMWS  V+++ L     PF     + +  GMK  + 
Sbjct: 180 CYTPYYVAPEVLGPEKYDK---SCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIR 236
Query: 110 GLRITIP----PGISSHLSKLIRICMNEDPGKRPTF 141
             +   P      +S  +  LIR  +  +P +R T 
Sbjct: 237 MGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTI 272

>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2 Length = 400

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 9/96 (9%)
Query: 52  CYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEV--GMKVALE 109
           CY P +++PE L  +  D+   +CDMWS  V+++ L     PF     + +  GMK  + 
Sbjct: 224 CYTPYYVAPEVLGPEKYDK---SCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIR 280
Query: 110 GLRITIP----PGISSHLSKLIRICMNEDPGKRPTF 141
             +   P      +S  +  LIR  +  +P +R T 
Sbjct: 281 MGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTI 316

>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To Mapkap Kinase-2 Length = 327

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 9/96 (9%)
Query: 52  CYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEV--GMKVALE 109
           CY P +++PE L  +  D+   +CDMWS  V+++ L     PF     + +  GMK  + 
Sbjct: 180 CYTPYYVAPEVLGPEKYDK---SCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIR 236
Query: 110 GLRITIP----PGISSHLSKLIRICMNEDPGKRPTF 141
             +   P      +S  +  LIR  +  +P +R T 
Sbjct: 237 MGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTI 272

>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap Kinase-2 Length = 325

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 9/96 (9%)
Query: 52  CYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEV--GMKVALE 109
           CY P +++PE L  +  D+   +CDMWS  V+++ L     PF     + +  GMK  + 
Sbjct: 185 CYTPYYVAPEVLGPEKYDK---SCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIR 241
Query: 110 GLRITIP----PGISSHLSKLIRICMNEDPGKRPTF 141
             +   P      +S  +  LIR  +  +P +R T 
Sbjct: 242 MGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTI 277

>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1 Length = 319

Iteration: 1
 Score = 41.2 bits (95), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 9/96 (9%)
Query: 52  CYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEV--GMKVALE 109
           CY P +++PE L  +  D+   +CDMWS  V+++ L     PF     + +  GMK  + 
Sbjct: 179 CYTPYYVAPEVLGPEKYDK---SCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIR 235
Query: 110 GLRITIP----PGISSHLSKLIRICMNEDPGKRPTF 141
             +   P      +S  +  LIR  +  +P +R T 
Sbjct: 236 MGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTI 271

>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76 Length = 324

Iteration: 1
 Score = 41.2 bits (95), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 9/96 (9%)
Query: 52  CYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEV--GMKVALE 109
           CY P +++PE L  +  D+   +CDMWS  V+++ L     PF     + +  GMK  + 
Sbjct: 184 CYTPYYVAPEVLGPEKYDK---SCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIR 240
Query: 110 GLRITIP----PGISSHLSKLIRICMNEDPGKRPTF 141
             +   P      +S  +  LIR  +  +P +R T 
Sbjct: 241 MGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTI 276

>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal Form-1, Soaking) Length = 326

Iteration: 1
 Score = 41.2 bits (95), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 9/96 (9%)
Query: 52  CYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEV--GMKVALE 109
           CY P +++PE L  +  D+   +CDMWS  V+++ L     PF     + +  GMK  + 
Sbjct: 186 CYTPYYVAPEVLGPEKYDK---SCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIR 242
Query: 110 GLRITIP----PGISSHLSKLIRICMNEDPGKRPTF 141
             +   P      +S  +  LIR  +  +P +R T 
Sbjct: 243 MGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTI 278

>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b Length = 318

Iteration: 1
 Score = 41.2 bits (95), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 9/96 (9%)
Query: 52  CYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEV--GMKVALE 109
           CY P +++PE L  +  D+   +CDMWS  V+++ L     PF     + +  GMK  + 
Sbjct: 178 CYTPYYVAPEVLGPEKYDK---SCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIR 234
Query: 110 GLRITIP----PGISSHLSKLIRICMNEDPGKRPTF 141
             +   P      +S  +  LIR  +  +P +R T 
Sbjct: 235 MGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTI 270

>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor 6-(5-(2-Aminopyrimidin-4-Ylamino)-2- Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide Length = 320

Iteration: 1
 Score = 40.8 bits (94), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 9/96 (9%)
Query: 52  CYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEV--GMKVALE 109
           CY P +++PE L  +  D+   +CDMWS  V+++ L     PF     + +  GMK  + 
Sbjct: 178 CYTPYYVAPEVLGPEKYDK---SCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIR 234
Query: 110 GLRITIP----PGISSHLSKLIRICMNEDPGKRPTF 141
             +   P      +S  +  LIR  +  +P +R T 
Sbjct: 235 MGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTI 270

>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands Length = 334

Iteration: 1
 Score = 40.8 bits (94), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 9/96 (9%)
Query: 52  CYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEV--GMKVALE 109
           CY P +++PE L  +  D+   +CDMWS  V+++ L     PF     + +  GMK  + 
Sbjct: 194 CYTPYYVAPEVLGPEKYDK---SCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIR 250
Query: 110 GLRITIP----PGISSHLSKLIRICMNEDPGKRPTF 141
             +   P      +S  +  LIR  +  +P +R T 
Sbjct: 251 MGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTI 286

>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In Complex With Sto-609 Length = 298

Iteration: 1
 Score = 40.8 bits (94), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 24/84 (28%), Positives = 42/84 (50%)
Query: 55  PAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRIT 114
           PA+M+PE+L +     + +A D+W+  V L+     + PF D   M +  K+  + L   
Sbjct: 201 PAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMCLHSKIKSQALEFP 260
Query: 115 IPPGISSHLSKLIRICMNEDPGKR 138
             P I+  L  LI   ++++P  R
Sbjct: 261 DQPDIAEDLKDLITRMLDKNPESR 284

>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant Length = 327

Iteration: 1
 Score = 40.8 bits (94), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 34/121 (28%), Positives = 55/121 (45%), Gaps = 12/121 (9%)
Query: 33  LTARINMADAQFSFQQR---GR-----CYYPAWMSPEALQKKPGDRNLEACDMWSFAVLL 84
           L A +N+  A F F      G      C  P + +PE  Q K  D      D+WS  V+L
Sbjct: 146 LDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDG--PEVDVWSLGVIL 203
Query: 85  WELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMV 144
           + L +  +PF      E+  +V L G +  IP  +S+    L++  +  +P KR T + +
Sbjct: 204 YTLVSGSLPFDGQNLKELRERV-LRG-KYRIPFYMSTDCENLLKKFLILNPSKRGTLEQI 261
Query: 145 L 145
           +
Sbjct: 262 M 262

>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Wild Type Length = 327

Iteration: 1
 Score = 40.8 bits (94), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 34/121 (28%), Positives = 55/121 (45%), Gaps = 12/121 (9%)
Query: 33  LTARINMADAQFSFQQR---GR-----CYYPAWMSPEALQKKPGDRNLEACDMWSFAVLL 84
           L A +N+  A F F      G      C  P + +PE  Q K  D      D+WS  V+L
Sbjct: 146 LDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDG--PEVDVWSLGVIL 203
Query: 85  WELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMV 144
           + L +  +PF      E+  +V L G +  IP  +S+    L++  +  +P KR T + +
Sbjct: 204 YTLVSGSLPFDGQNLKELRERV-LRG-KYRIPFYMSTDCENLLKKFLILNPSKRGTLEQI 261
Query: 145 L 145
           +
Sbjct: 262 M 262

>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: K82r Mutant Length = 327

Iteration: 1
 Score = 40.8 bits (94), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 34/121 (28%), Positives = 55/121 (45%), Gaps = 12/121 (9%)
Query: 33  LTARINMADAQFSFQQR---GR-----CYYPAWMSPEALQKKPGDRNLEACDMWSFAVLL 84
           L A +N+  A F F      G      C  P + +PE  Q K  D      D+WS  V+L
Sbjct: 146 LDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDG--PEVDVWSLGVIL 203
Query: 85  WELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMV 144
           + L +  +PF      E+  +V L G +  IP  +S+    L++  +  +P KR T + +
Sbjct: 204 YTLVSGSLPFDGQNLKELRERV-LRG-KYRIPFYMSTDCENLLKKFLILNPSKRGTLEQI 261
Query: 145 L 145
           +
Sbjct: 262 M 262

>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r, T208e Double Mutant Length = 327

Iteration: 1
 Score = 40.8 bits (94), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 34/121 (28%), Positives = 55/121 (45%), Gaps = 12/121 (9%)
Query: 33  LTARINMADAQFSFQQR---GR-----CYYPAWMSPEALQKKPGDRNLEACDMWSFAVLL 84
           L A +N+  A F F      G      C  P + +PE  Q K  D      D+WS  V+L
Sbjct: 146 LDADMNIKIADFGFSNEFTFGNKLDEFCGSPPYAAPELFQGKKYDG--PEVDVWSLGVIL 203
Query: 85  WELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMV 144
           + L +  +PF      E+  +V L G +  IP  +S+    L++  +  +P KR T + +
Sbjct: 204 YTLVSGSLPFDGQNLKELRERV-LRG-KYRIPFYMSTDCENLLKKFLILNPSKRGTLEQI 261
Query: 145 L 145
           +
Sbjct: 262 M 262

>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES BY Mimicking Host Substrates Length = 319

Iteration: 1
 Score = 40.8 bits (94), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 54/121 (44%), Gaps = 12/121 (9%)
Query: 33  LTARINMADAQFSFQQRGR--------CYYPAWMSPEALQKKPGDRNLEACDMWSFAVLL 84
           L A +N+  A F F             C  P + +PE  Q K  D      D+WS  V+L
Sbjct: 139 LDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDG--PEVDVWSLGVIL 196
Query: 85  WELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMV 144
           + L +  +PF      E+  +V L G +  IP  +S+    L++  +  +P KR T + +
Sbjct: 197 YTLVSGSLPFDGQNLKELRERV-LRG-KYRIPFYMSTDCENLLKKFLILNPSKRGTLEQI 254
Query: 145 L 145
           +
Sbjct: 255 M 255

>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme49_105860 Length = 467

Iteration: 1
 Score = 40.8 bits (94), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 29/95 (30%), Positives = 47/95 (49%), Gaps = 11/95 (11%)
Query: 47  QQRGRCYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKV 106
           ++ G  YY   ++PE L+KK      E CD+WS  V+L+ L     PF   T  E+ +K 
Sbjct: 165 ERLGTAYY---IAPEVLRKKYD----EKCDVWSCGVILYILLCGYPPFGGQTDQEI-LKR 216
Query: 107 ALEGLRITIPPG---ISSHLSKLIRICMNEDPGKR 138
             +G     PP    +S    +L+++ +  +P KR
Sbjct: 217 VEKGKFSFDPPDWTQVSDEAKQLVKLMLTYEPSKR 251

>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In Complex With A Diaminopyrimidine Carboxamide Inhibitor Length = 277

Iteration: 1
 Score = 40.4 bits (93), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 30/117 (25%), Positives = 51/117 (43%), Gaps = 8/117 (6%)
Query: 30  DEDLTARINMADAQFSFQQRGRCYYPA-WMSPEALQKKPGDRNLEACDMWSFAVLLWE-L 87
           D  L+  +   +  +  Q  G+  +P  W +PE +      +     D+WSF VL+WE  
Sbjct: 154 DFGLSKALRADENXYKAQTHGK--WPVKWYAPECINYY---KFSSKSDVWSFGVLMWEAF 208
Query: 88  ATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMV 144
           +  + P+  +   EV   +  +G R+  P G    +  L+ +C   D   RP F  V
Sbjct: 209 SYGQKPYRGMKGSEVTAMLE-KGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAV 264

>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In Complex With Staurosporine Length = 310

Iteration: 1
 Score = 40.4 bits (93), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 26/88 (29%), Positives = 40/88 (45%), Gaps = 4/88 (4%)
Query: 55  PAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEG-LRI 113
           P WM+PE +  +  D   E  D++SF ++L E+  R     D  P  +   + + G L  
Sbjct: 186 PYWMAPEMINGRSYD---EKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLDR 242
Query: 114 TIPPGISSHLSKLIRICMNEDPGKRPTF 141
             PP        +   C + DP KRP+F
Sbjct: 243 YCPPNCPPSFFPITVRCCDLDPEKRPSF 270

>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In Complex With A Diaminopyrimidine Carboxamide Inhibitor Length = 277

Iteration: 1
 Score = 40.4 bits (93), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 30/117 (25%), Positives = 51/117 (43%), Gaps = 8/117 (6%)
Query: 30  DEDLTARINMADAQFSFQQRGRCYYPA-WMSPEALQKKPGDRNLEACDMWSFAVLLWE-L 87
           D  L+  +   +  +  Q  G+  +P  W +PE +      +     D+WSF VL+WE  
Sbjct: 154 DFGLSKALRADENYYKAQTHGK--WPVKWYAPECINYY---KFSSKSDVWSFGVLMWEAF 208
Query: 88  ATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMV 144
           +  + P+  +   EV   +  +G R+  P G    +  L+ +C   D   RP F  V
Sbjct: 209 SYGQKPYRGMKGSEVTAMLE-KGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAV 264

>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With A Sulfonamidopyrazine Piperidine Inhibitor Length = 274

Iteration: 1
 Score = 40.4 bits (93), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 30/117 (25%), Positives = 51/117 (43%), Gaps = 8/117 (6%)
Query: 30  DEDLTARINMADAQFSFQQRGRCYYPA-WMSPEALQKKPGDRNLEACDMWSFAVLLWE-L 87
           D  L+  +   +  +  Q  G+  +P  W +PE +      +     D+WSF VL+WE  
Sbjct: 150 DFGLSKALRADENYYKAQTHGK--WPVKWYAPECINYY---KFSSKSDVWSFGVLMWEAF 204
Query: 88  ATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMV 144
           +  + P+  +   EV   +  +G R+  P G    +  L+ +C   D   RP F  V
Sbjct: 205 SYGQKPYRGMKGSEVTAMLE-KGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAV 260

>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836 Length = 273

Iteration: 1
 Score = 40.4 bits (93), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 30/117 (25%), Positives = 51/117 (43%), Gaps = 8/117 (6%)
Query: 30  DEDLTARINMADAQFSFQQRGRCYYPA-WMSPEALQKKPGDRNLEACDMWSFAVLLWE-L 87
           D  L+  +   +  +  Q  G+  +P  W +PE +      +     D+WSF VL+WE  
Sbjct: 148 DFGLSKALRADENYYKAQTHGK--WPVKWYAPECINYY---KFSSKSDVWSFGVLMWEAF 202
Query: 88  ATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMV 144
           +  + P+  +   EV   +  +G R+  P G    +  L+ +C   D   RP F  V
Sbjct: 203 SYGQKPYRGMKGSEVTAMLE-KGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAV 258

>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2- Phenylaminopyrimidines As Potent Inhibitors Of Spleen Tyrosine Kinase (Syk) Length = 291

Iteration: 1
 Score = 40.0 bits (92), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 30/117 (25%), Positives = 51/117 (43%), Gaps = 8/117 (6%)
Query: 30  DEDLTARINMADAQFSFQQRGRCYYPA-WMSPEALQKKPGDRNLEACDMWSFAVLLWE-L 87
           D  L+  +   +  +  Q  G+  +P  W +PE +      +     D+WSF VL+WE  
Sbjct: 168 DFGLSKALRADENYYKAQTHGK--WPVKWYAPECINYY---KFSSKSDVWSFGVLMWEAF 222
Query: 88  ATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMV 144
           +  + P+  +   EV   +  +G R+  P G    +  L+ +C   D   RP F  V
Sbjct: 223 SYGQKPYRGMKGSEVTAMLE-KGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAV 278

>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain Length = 291

Iteration: 1
 Score = 40.0 bits (92), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 30/117 (25%), Positives = 51/117 (43%), Gaps = 8/117 (6%)
Query: 30  DEDLTARINMADAQFSFQQRGRCYYPA-WMSPEALQKKPGDRNLEACDMWSFAVLLWE-L 87
           D  L+  +   +  +  Q  G+  +P  W +PE +      +     D+WSF VL+WE  
Sbjct: 160 DFGLSKALRADENYYKAQTHGK--WPVKWYAPECINYY---KFSSKSDVWSFGVLMWEAF 214
Query: 88  ATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMV 144
           +  + P+  +   EV   +  +G R+  P G    +  L+ +C   D   RP F  V
Sbjct: 215 SYGQKPYRGMKGSEVTAMLE-KGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAV 270

>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 290

Iteration: 1
 Score = 40.0 bits (92), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 30/106 (28%), Positives = 44/106 (41%), Gaps = 17/106 (16%)
Query: 57  WMSPEALQKKPGDRNLEACDMWSFAVLLWELATR-------EVPFADLTPMEVGMKVAL- 108
           W +PE L++    +   A D+WSF V L+EL T           F +L     G    L 
Sbjct: 180 WYAPECLKEC---KFYYASDVWSFGVTLYELLTYCDSNQSPHTKFTELIGHTQGQMTVLR 236
Query: 109 ------EGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPIL 148
                  G R+  P      +  L++ C   +   RPTF  ++PIL
Sbjct: 237 LTELLERGERLPRPDRCPCEIYHLMKNCWETEASFRPTFQNLVPIL 282

>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 291

Iteration: 1
 Score = 40.0 bits (92), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 30/106 (28%), Positives = 44/106 (41%), Gaps = 17/106 (16%)
Query: 57  WMSPEALQKKPGDRNLEACDMWSFAVLLWELATR-------EVPFADLTPMEVGMKVAL- 108
           W +PE L++    +   A D+WSF V L+EL T           F +L     G    L 
Sbjct: 181 WYAPECLKEC---KFYYASDVWSFGVTLYELLTYCDSNQSPHTKFTELIGHTQGQMTVLR 237
Query: 109 ------EGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPIL 148
                  G R+  P      +  L++ C   +   RPTF  ++PIL
Sbjct: 238 LTELLERGERLPRPDRCPCEIYHLMKNCWETEASFRPTFQNLVPIL 283

>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7- Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2- Phenylcyclopropyl)urea Length = 293

Iteration: 1
 Score = 40.0 bits (92), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 30/117 (25%), Positives = 51/117 (43%), Gaps = 8/117 (6%)
Query: 30  DEDLTARINMADAQFSFQQRGRCYYPA-WMSPEALQKKPGDRNLEACDMWSFAVLLWE-L 87
           D  L+  +   +  +  Q  G+  +P  W +PE +      +     D+WSF VL+WE  
Sbjct: 170 DFGLSKALRADENYYKAQTHGK--WPVKWYAPECINYY---KFSSKSDVWSFGVLMWEAF 224
Query: 88  ATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMV 144
           +  + P+  +   EV   +  +G R+  P G    +  L+ +C   D   RP F  V
Sbjct: 225 SYGQKPYRGMKGSEVTAMLE-KGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAV 280

>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic Domain With Pyrazolylbenzimidazole Inhibitor 416 Length = 299

Iteration: 1
 Score = 40.0 bits (92), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 30/117 (25%), Positives = 51/117 (43%), Gaps = 8/117 (6%)
Query: 30  DEDLTARINMADAQFSFQQRGRCYYPA-WMSPEALQKKPGDRNLEACDMWSFAVLLWE-L 87
           D  L+  +   +  +  Q  G+  +P  W +PE +      +     D+WSF VL+WE  
Sbjct: 170 DFGLSKALRADENYYKAQTHGK--WPVKWYAPECINYY---KFSSKSDVWSFGVLMWEAF 224
Query: 88  ATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMV 144
           +  + P+  +   EV   +  +G R+  P G    +  L+ +C   D   RP F  V
Sbjct: 225 SYGQKPYRGMKGSEVTAMLE-KGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAV 280

>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1 Length = 297

Iteration: 1
 Score = 40.0 bits (92), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 29/118 (24%), Positives = 49/118 (41%), Gaps = 18/118 (15%)
Query: 23  FLFCCQIDEDLTARINMADAQFSFQQRGRCYYPAWMSPEALQKKP-GDRNLEACDMWSFA 81
           F FC QI  + + R  M               P WM+PE + +K  G +     D+WS  
Sbjct: 160 FGFCAQITPEQSKRSTMVGT------------PYWMAPEVVTRKAYGPK----VDIWSLG 203
Query: 82  VLLWELATREVPFADLTPMEVGMKVALEGL-RITIPPGISSHLSKLIRICMNEDPGKR 138
           ++  E+   E P+ +  P+     +A  G   +  P  +S+     +  C++ D  KR
Sbjct: 204 IMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKR 261

>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point Mutations (K299r, T423e) Length = 297

Iteration: 1
 Score = 40.0 bits (92), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 29/118 (24%), Positives = 49/118 (41%), Gaps = 18/118 (15%)
Query: 23  FLFCCQIDEDLTARINMADAQFSFQQRGRCYYPAWMSPEALQKKP-GDRNLEACDMWSFA 81
           F FC QI  + + R  M               P WM+PE + +K  G +     D+WS  
Sbjct: 160 FGFCAQITPEQSKRSEMVGT------------PYWMAPEVVTRKAYGPK----VDIWSLG 203
Query: 82  VLLWELATREVPFADLTPMEVGMKVALEGL-RITIPPGISSHLSKLIRICMNEDPGKR 138
           ++  E+   E P+ +  P+     +A  G   +  P  +S+     +  C++ D  KR
Sbjct: 204 IMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKR 261

>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide Length = 346

Iteration: 1
 Score = 40.0 bits (92), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 28/124 (22%), Positives = 53/124 (42%), Gaps = 26/124 (20%)
Query: 23  FLFCCQIDEDLTARINMADAQFSFQQRGRCYYPAWMSPEALQKKPGDRNLEACDMWSFAV 82
           F FC Q+ +++  R  +               P WM+PE + + P        D+WS  +
Sbjct: 214 FGFCAQVSKEVPRRKXLVGT------------PYWMAPELISRLPYG---PEVDIWSLGI 258
Query: 83  LLWELATREVPFADLTPMEVGMKVALEGLRITIPP------GISSHLSKLIRICMNEDPG 136
           ++ E+   E P+ +  P++     A++ +R  +PP       +S  L   +   +  DP 
Sbjct: 259 MVIEMVDGEPPYFNEPPLK-----AMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPA 313
Query: 137 KRPT 140
           +R T
Sbjct: 314 QRAT 317

>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin Length = 305

Iteration: 1
 Score = 40.0 bits (92), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 23/87 (26%), Positives = 44/87 (50%), Gaps = 5/87 (5%)
Query: 52  CYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGL 111
           C    +M+PE + ++    + ++ D WSF VL++E+ T  +PF      E  M + L+  
Sbjct: 188 CGTVEYMAPEVVNRRG---HTQSADWWSFGVLMFEMLTGTLPFQGKDRKET-MTMILKA- 242
Query: 112 RITIPPGISSHLSKLIRICMNEDPGKR 138
           ++ +P  +S     L+R+    +P  R
Sbjct: 243 KLGMPQFLSPEAQSLLRMLFKRNPANR 269

>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound To Ldn- 193189 Length = 305

Iteration: 1
 Score = 39.7 bits (91), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 36/151 (23%), Positives = 62/151 (41%), Gaps = 23/151 (15%)
Query: 24  LFCCQIDEDLTARINMADAQFSFQQRGRCYYPAWMSPEALQKKPGDRNLEA---CDMWSF 80
           L CC  D  L    +            R     +M+PE L ++      E+    D+W+F
Sbjct: 150 LQCCIADLGLAVMHSQGSDYLDIGNNPRVGTKRYMAPEVLDEQIRTDCFESYKWTDIWAF 209
Query: 81  AVLLWELATREV----------PFADLTPMEVGMK-----VALEGLRITIPPGIS----- 120
            ++LWE+A R +          PF D+ P +   +     V ++    TIP  ++     
Sbjct: 210 GLVLWEIARRTIVNGIVEDYRPPFYDVVPNDPSFEDMKKVVCVDQQTPTIPNRLAADPVL 269
Query: 121 SHLSKLIRICMNEDPGKRPTFDMVLPILDKM 151
           S L++++R C   +P  R T   +   L K+
Sbjct: 270 SGLAQMMRECWYPNPSARLTALRIKKTLQKI 300

>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex With Flavonoid Glycoside Sl0101 Length = 304

Iteration: 1
 Score = 39.7 bits (91), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 23/87 (26%), Positives = 44/87 (50%), Gaps = 5/87 (5%)
Query: 52  CYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGL 111
           C    +M+PE + ++    + ++ D WSF VL++E+ T  +PF      E  M + L+  
Sbjct: 187 CGTVEYMAPEVVNRRG---HTQSADWWSFGVLMFEMLTGTLPFQGKDRKET-MTMILKA- 241
Query: 112 RITIPPGISSHLSKLIRICMNEDPGKR 138
           ++ +P  +S     L+R+    +P  R
Sbjct: 242 KLGMPQFLSPEAQSLLRMLFKRNPANR 268

>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C Beta Ii Complexed With A Bisindolylmaleimide Inhibitor Length = 353

Iteration: 1
 Score = 39.7 bits (91), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 22/87 (25%), Positives = 41/87 (47%), Gaps = 5/87 (5%)
Query: 52  CYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGL 111
           C  P +++PE +  +P  +++   D W+F VLL+E+   + PF      E+   +     
Sbjct: 182 CGTPDYIAPEIIAYQPYGKSV---DWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEH-- 236
Query: 112 RITIPPGISSHLSKLIRICMNEDPGKR 138
            +  P  +S     + +  M + PGKR
Sbjct: 237 NVAYPKSMSKEAVAICKGLMTKHPGKR 263

>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein Kinase C Beta Ii Length = 674

Iteration: 1
 Score = 39.7 bits (91), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 22/87 (25%), Positives = 41/87 (47%), Gaps = 5/87 (5%)
Query: 52  CYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGL 111
           C  P +++PE +  +P  +++   D W+F VLL+E+   + PF      E+   +     
Sbjct: 503 CGTPDYIAPEIIAYQPYGKSV---DWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEH-- 557
Query: 112 RITIPPGISSHLSKLIRICMNEDPGKR 138
            +  P  +S     + +  M + PGKR
Sbjct: 558 NVAYPKSMSKEAVAICKGLMTKHPGKR 584

>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N- Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 Length = 325

Iteration: 1
 Score = 39.7 bits (91), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 23/87 (26%), Positives = 44/87 (50%), Gaps = 5/87 (5%)
Query: 52  CYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGL 111
           C    +M+PE + ++    + ++ D WSF VL++E+ T  +PF      E  M + L+  
Sbjct: 187 CGTVEYMAPEVVNRRG---HTQSADWWSFGVLMFEMLTGTLPFQGKDRKET-MTMILKA- 241
Query: 112 RITIPPGISSHLSKLIRICMNEDPGKR 138
           ++ +P  +S     L+R+    +P  R
Sbjct: 242 KLGMPQFLSPEAQSLLRMLFKRNPANR 268

>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A Pyrimidinopyridone Inhibitor Length = 333

Iteration: 1
 Score = 39.7 bits (91), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 28/121 (23%), Positives = 55/121 (45%), Gaps = 7/121 (5%)
Query: 35  ARINMADAQFSFQQRGRCYYPA-WMSPEALQKKPGDRNLEACDMWSFAVLLWELATREV- 92
           AR  M D+ +    +G    P  WM+PE++            D+WS+ +LLWE+ +  + 
Sbjct: 211 ARDIMNDSNYIV--KGNARLPVKWMAPESIFDCVYTVQ---SDVWSYGILLWEIFSLGLN 265
Query: 93  PFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKMK 152
           P+  +       K+  +G ++  P     ++  +++ C   +P  RPTF  +   L +  
Sbjct: 266 PYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQA 325
Query: 153 R 153
           +
Sbjct: 326 Q 326

>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone Inhibitor Length = 335

Iteration: 1
 Score = 39.7 bits (91), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 28/121 (23%), Positives = 55/121 (45%), Gaps = 7/121 (5%)
Query: 35  ARINMADAQFSFQQRGRCYYPA-WMSPEALQKKPGDRNLEACDMWSFAVLLWELATREV- 92
           AR  M D+ +    +G    P  WM+PE++            D+WS+ +LLWE+ +  + 
Sbjct: 213 ARDIMNDSNYIV--KGNARLPVKWMAPESIFDCV---YTVQSDVWSYGILLWEIFSLGLN 267
Query: 93  PFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKMK 152
           P+  +       K+  +G ++  P     ++  +++ C   +P  RPTF  +   L +  
Sbjct: 268 PYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQA 327
Query: 153 R 153
           +
Sbjct: 328 Q 328

>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase Domain Length = 317

Iteration: 1
 Score = 39.7 bits (91), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 28/121 (23%), Positives = 55/121 (45%), Gaps = 7/121 (5%)
Query: 35  ARINMADAQFSFQQRGRCYYPA-WMSPEALQKKPGDRNLEACDMWSFAVLLWELATREV- 92
           AR  M D+ +    +G    P  WM+PE++            D+WS+ +LLWE+ +  + 
Sbjct: 199 ARDIMNDSNYIV--KGNARLPVKWMAPESIFDCVYTVQ---SDVWSYGILLWEIFSLGLN 253
Query: 93  PFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKMK 152
           P+  +       K+  +G ++  P     ++  +++ C   +P  RPTF  +   L +  
Sbjct: 254 PYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQA 313
Query: 153 R 153
           +
Sbjct: 314 Q 314

>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain Of Csf-1r Length = 329

Iteration: 1
 Score = 39.7 bits (91), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 28/121 (23%), Positives = 55/121 (45%), Gaps = 7/121 (5%)
Query: 35  ARINMADAQFSFQQRGRCYYPA-WMSPEALQKKPGDRNLEACDMWSFAVLLWELATREV- 92
           AR  M D+ +    +G    P  WM+PE++            D+WS+ +LLWE+ +  + 
Sbjct: 207 ARDIMNDSNYIV--KGNARLPVKWMAPESIFDCV---YTVQSDVWSYGILLWEIFSLGLN 261
Query: 93  PFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKMK 152
           P+  +       K+  +G ++  P     ++  +++ C   +P  RPTF  +   L +  
Sbjct: 262 PYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQA 321
Query: 153 R 153
           +
Sbjct: 322 Q 322

>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An Arylamide Inhibitor Length = 333

Iteration: 1
 Score = 39.7 bits (91), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 28/121 (23%), Positives = 55/121 (45%), Gaps = 7/121 (5%)
Query: 35  ARINMADAQFSFQQRGRCYYPA-WMSPEALQKKPGDRNLEACDMWSFAVLLWELATREV- 92
           AR  M D+ +    +G    P  WM+PE++            D+WS+ +LLWE+ +  + 
Sbjct: 211 ARDIMNDSNYIV--KGNARLPVKWMAPESIFDCVYTVQ---SDVWSYGILLWEIFSLGLN 265
Query: 93  PFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKMK 152
           P+  +       K+  +G ++  P     ++  +++ C   +P  RPTF  +   L +  
Sbjct: 266 PYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQA 325
Query: 153 R 153
           +
Sbjct: 326 Q 326

>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In Complex With A Consensus Peptide Length = 301

Iteration: 1
 Score = 39.7 bits (91), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 28/124 (22%), Positives = 53/124 (42%), Gaps = 26/124 (20%)
Query: 23  FLFCCQIDEDLTARINMADAQFSFQQRGRCYYPAWMSPEALQKKPGDRNLEACDMWSFAV 82
           F FC Q+ +++  R  +               P WM+PE + + P        D+WS  +
Sbjct: 169 FGFCAQVSKEVPRRKXLVGT------------PYWMAPELISRLPYG---PEVDIWSLGI 213
Query: 83  LLWELATREVPFADLTPMEVGMKVALEGLRITIPP------GISSHLSKLIRICMNEDPG 136
           ++ E+   E P+ +  P++     A++ +R  +PP       +S  L   +   +  DP 
Sbjct: 214 MVIEMVDGEPPYFNEPPLK-----AMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPA 268
Query: 137 KRPT 140
           +R T
Sbjct: 269 QRAT 272

>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Cgp74514a Length = 303

Iteration: 1
 Score = 39.7 bits (91), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 28/124 (22%), Positives = 53/124 (42%), Gaps = 26/124 (20%)
Query: 23  FLFCCQIDEDLTARINMADAQFSFQQRGRCYYPAWMSPEALQKKPGDRNLEACDMWSFAV 82
           F FC Q+ +++  R  +               P WM+PE + + P        D+WS  +
Sbjct: 171 FGFCAQVSKEVPRRKXLVGT------------PYWMAPELISRLPYG---PEVDIWSLGI 215
Query: 83  LLWELATREVPFADLTPMEVGMKVALEGLRITIPP------GISSHLSKLIRICMNEDPG 136
           ++ E+   E P+ +  P++     A++ +R  +PP       +S  L   +   +  DP 
Sbjct: 216 MVIEMVDGEPPYFNEPPLK-----AMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPA 270
Query: 137 KRPT 140
           +R T
Sbjct: 271 QRAT 274

>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 Length = 292

Iteration: 1
 Score = 39.7 bits (91), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 28/124 (22%), Positives = 53/124 (42%), Gaps = 26/124 (20%)
Query: 23  FLFCCQIDEDLTARINMADAQFSFQQRGRCYYPAWMSPEALQKKPGDRNLEACDMWSFAV 82
           F FC Q+ +++  R  +               P WM+PE + + P        D+WS  +
Sbjct: 160 FGFCAQVSKEVPRRKXLVGT------------PYWMAPELISRLPYG---PEVDIWSLGI 204
Query: 83  LLWELATREVPFADLTPMEVGMKVALEGLRITIPP------GISSHLSKLIRICMNEDPG 136
           ++ E+   E P+ +  P++     A++ +R  +PP       +S  L   +   +  DP 
Sbjct: 205 MVIEMVDGEPPYFNEPPLK-----AMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPA 259
Query: 137 KRPT 140
           +R T
Sbjct: 260 QRAT 263

>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Pf-03758309 Length = 296

Iteration: 1
 Score = 39.7 bits (91), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 28/124 (22%), Positives = 53/124 (42%), Gaps = 26/124 (20%)
Query: 23  FLFCCQIDEDLTARINMADAQFSFQQRGRCYYPAWMSPEALQKKPGDRNLEACDMWSFAV 82
           F FC Q+ +++  R  +               P WM+PE + + P        D+WS  +
Sbjct: 164 FGFCAQVSKEVPRRKXLVGT------------PYWMAPELISRLPYG---PEVDIWSLGI 208
Query: 83  LLWELATREVPFADLTPMEVGMKVALEGLRITIPP------GISSHLSKLIRICMNEDPG 136
           ++ E+   E P+ +  P++     A++ +R  +PP       +S  L   +   +  DP 
Sbjct: 209 MVIEMVDGEPPYFNEPPLK-----AMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPA 263
Query: 137 KRPT 140
           +R T
Sbjct: 264 QRAT 267

>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Inactive Double Mutant With Selenomethionine Length = 327

Iteration: 1
 Score = 39.7 bits (91), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 33/119 (27%), Positives = 54/119 (45%), Gaps = 10/119 (8%)
Query: 32  DLTARINMAD----AQFSFQQR--GRCYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLW 85
           D    I +AD     +F+F  +    C  P + +PE  Q K  D      D+WS  V+L+
Sbjct: 147 DADXNIKIADFGFSNEFTFGNKLDAFCGAPPYAAPELFQGKKYDG--PEVDVWSLGVILY 204
Query: 86  ELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMV 144
            L +  +PF      E+  +V L G +  IP   S+    L++  +  +P KR T + +
Sbjct: 205 TLVSGSLPFDGQNLKELRERV-LRG-KYRIPFYXSTDCENLLKKFLILNPSKRGTLEQI 261

>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk Activation Switch Length = 635

Iteration: 1
 Score = 39.7 bits (91), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 25/89 (28%), Positives = 40/89 (44%), Gaps = 5/89 (5%)
Query: 57  WMSPEALQKKPGDRNLEACDMWSFAVLLWE-LATREVPFADLTPMEVGMKVALEGLRITI 115
           W +PE +      +     D+WSF VL+WE  +  + P+  +   EV   +  +G R+  
Sbjct: 538 WYAPECINYY---KFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE-KGERMGC 593
Query: 116 PPGISSHLSKLIRICMNEDPGKRPTFDMV 144
           P G    +  L+ +C   D   RP F  V
Sbjct: 594 PAGCPREMYDLMNLCWTYDVENRPGFAAV 622

>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk Activation Switch Length = 636

Iteration: 1
 Score = 39.7 bits (91), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 25/89 (28%), Positives = 40/89 (44%), Gaps = 5/89 (5%)
Query: 57  WMSPEALQKKPGDRNLEACDMWSFAVLLWE-LATREVPFADLTPMEVGMKVALEGLRITI 115
           W +PE +      +     D+WSF VL+WE  +  + P+  +   EV   +  +G R+  
Sbjct: 539 WYAPECINYY---KFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE-KGERMGC 594
Query: 116 PPGISSHLSKLIRICMNEDPGKRPTFDMV 144
           P G    +  L+ +C   D   RP F  V
Sbjct: 595 PAGCPREMYDLMNLCWTYDVENRPGFAAV 623

>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From Toxoplasma Gondii, 541.m00134, Kinase Domain Length = 287

Iteration: 1
 Score = 39.3 bits (90), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 50/102 (49%), Gaps = 11/102 (10%)
Query: 47  QQRGRCYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKV 106
           ++ G  YY   ++PE L+KK      E CD+WS  V+L+ L     PF   T  E+ +K 
Sbjct: 182 ERLGTAYY---IAPEVLRKKYD----EKCDVWSCGVILYILLCGYPPFGGQTDQEI-LKR 233
Query: 107 ALEGLRITIPPG---ISSHLSKLIRICMNEDPGKRPTFDMVL 145
             +G     PP    +S    +L+++ +  +P KR + +  L
Sbjct: 234 VEKGKFSFDPPDWTQVSDEAKQLVKLMLTYEPSKRISAEEAL 275

>pdb|4FIE|A Chain A, Full-Length Human Pak4 Length = 423

Iteration: 1
 Score = 39.3 bits (90), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 28/124 (22%), Positives = 53/124 (42%), Gaps = 26/124 (20%)
Query: 23  FLFCCQIDEDLTARINMADAQFSFQQRGRCYYPAWMSPEALQKKPGDRNLEACDMWSFAV 82
           F FC Q+ +++  R  +               P WM+PE + + P        D+WS  +
Sbjct: 291 FGFCAQVSKEVPRRKXLVGT------------PYWMAPELISRLPYG---PEVDIWSLGI 335
Query: 83  LLWELATREVPFADLTPMEVGMKVALEGLRITIPP------GISSHLSKLIRICMNEDPG 136
           ++ E+   E P+ +  P++     A++ +R  +PP       +S  L   +   +  DP 
Sbjct: 336 MVIEMVDGEPPYFNEPPLK-----AMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPA 390
Query: 137 KRPT 140
           +R T
Sbjct: 391 QRAT 394

>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain Length = 306

Iteration: 1
 Score = 39.3 bits (90), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 29/118 (24%), Positives = 48/118 (40%), Gaps = 18/118 (15%)
Query: 23  FLFCCQIDEDLTARINMADAQFSFQQRGRCYYPAWMSPEALQKKP-GDRNLEACDMWSFA 81
           F FC QI  + + R  M               P WM+PE + +K  G +     D+WS  
Sbjct: 161 FGFCAQITPEQSKRSTMVGT------------PYWMAPEVVTRKAYGPK----VDIWSLG 204
Query: 82  VLLWELATREVPFADLTPMEVGMKVALEGL-RITIPPGISSHLSKLIRICMNEDPGKR 138
           ++  E+   E P+ +  P+     +A  G   +  P  +S+     +  C+  D  KR
Sbjct: 205 IMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKR 262

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	153
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	8e-64
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	5e-34
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	9e-34
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	1e-29
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	4e-29
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	4e-28
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	1e-27
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	3e-27
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	1e-25
3q4u_A	301	Activin receptor type-1; structural genomics conso	5e-23
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	2e-22
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	3e-22
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	9e-22
3soc_A	322	Activin receptor type-2A; structural genomics cons	1e-18
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	3e-18
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	4e-18
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	8e-18
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	9e-18
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	1e-17
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	1e-17
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	1e-17
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	1e-17
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	1e-17
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	2e-17
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	2e-17
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	2e-17
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	2e-17
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	3e-17
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	3e-17
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	3e-17
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	3e-17
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	3e-17
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	4e-17
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	4e-17
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	5e-17
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	5e-17
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	6e-17
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	6e-17
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	6e-17
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	7e-17
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	8e-17
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	8e-17
4aoj_A	329	High affinity nerve growth factor receptor; transf	8e-17
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	1e-16
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	1e-16
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	1e-16
3pls_A	298	Macrophage-stimulating protein receptor; protein k	1e-16
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	1e-16
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	1e-16
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	1e-16
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	1e-16
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	2e-16
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	3e-16
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	5e-16
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	8e-16
3v5q_A	297	NT-3 growth factor receptor; kinase domain, kinase	9e-16
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	9e-16
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	1e-15
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	1e-15
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	2e-15
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	2e-15
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	4e-15
3zzw_A	289	Tyrosine-protein kinase transmembrane receptor RO;	4e-15
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	6e-15
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	7e-15
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	7e-15
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	1e-14
2a19_B	284	Interferon-induced, double-stranded RNA-activated	2e-14
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	3e-14
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	3e-14
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	3e-14
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	3e-14
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	5e-14
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	5e-14
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	8e-14
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	9e-14
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	1e-13
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	1e-13
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	3e-13
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	4e-13
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	4e-13
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	6e-13
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	7e-13
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	1e-12
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	2e-12
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	4e-12
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	5e-12
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	6e-12
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	8e-12
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	3e-11
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	4e-11
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	6e-11
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	6e-11
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	1e-10
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	2e-10
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	3e-10
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	3e-10
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	3e-10
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	5e-10
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	2e-09
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	3e-09
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	4e-09
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	5e-09
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	7e-09
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	9e-09
3aln_A	327	Dual specificity mitogen-activated protein kinase;	2e-08
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	2e-08
2dyl_A	318	Dual specificity mitogen-activated protein kinase	2e-08
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	3e-08
3fme_A	290	Dual specificity mitogen-activated protein kinase;	3e-08
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	5e-08
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	8e-08
3an0_A	340	Dual specificity mitogen-activated protein kinase;	9e-08
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	1e-07
1uu3_A	310	HPDK1, 3-phosphoinositide dependent protein kinase	1e-07
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	2e-07
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	2e-07
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	2e-07
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	2e-07
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	2e-07
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	3e-07
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	3e-07
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	4e-07
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	5e-07
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	5e-07
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	6e-07
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	6e-07
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	9e-07
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	9e-07
3uqc_A	286	Probable conserved transmembrane protein; structur	1e-06
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	2e-06
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	2e-06
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	3e-06
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	3e-06
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	3e-06
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	9e-06
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	9e-06
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	9e-06
3ork_A	311	Serine/threonine protein kinase; structural genomi	1e-05
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	1e-05
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	1e-05
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	1e-05
3pvu_A	695	Beta-adrenergic receptor kinase 1; transferase, se	2e-05
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	2e-05
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	2e-05
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	2e-05
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	2e-05
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	2e-05
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	2e-05
3g51_A	325	Ribosomal protein S6 kinase alpha-3; N-terminal ki	2e-05
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	2e-05
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	2e-05
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	2e-05
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	3e-05
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	3e-05
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	3e-05
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	4e-05
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	4e-05
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	5e-05
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	5e-05
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	5e-05
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	5e-05
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	6e-05
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	7e-05
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	9e-05
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	9e-05
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	1e-04
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	1e-04
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	1e-04
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	2e-04
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	2e-04
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	2e-04
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	2e-04
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	3e-04
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	3e-04
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	4e-04
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	4e-04
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	4e-04
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	6e-04
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	6e-04
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	7e-04
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	7e-04
3bhy_A	283	Death-associated protein kinase 3; death associate	8e-04

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score =  195 bits (498), Expect = 8e-64
 Identities = 93/125 (74%), Positives = 108/125 (86%)

Query: 29  IDEDLTARINMADAQFSFQQRGRCYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWELA 88
           IDED+TARI+MAD +FSFQ  GR Y PAW++PEALQKKP D N  + DMWSFAVLLWEL 
Sbjct: 146 IDEDMTARISMADVKFSFQSPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELV 205

Query: 89  TREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPIL 148
           TREVPFADL+ ME+GMKVALEGLR TIPPGIS H+SKL++ICMNEDP KRP FDM++PIL
Sbjct: 206 TREVPFADLSNMEIGMKVALEGLRPTIPPGISPHVSKLMKICMNEDPAKRPKFDMIVPIL 265

Query: 149 DKMKR 153
           +KM+ 
Sbjct: 266 EKMQD 270

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score =  120 bits (302), Expect = 5e-34
 Identities = 42/157 (26%), Positives = 76/157 (48%), Gaps = 24/157 (15%)

Query: 11  YLNSKKS-------KTSNAFLFCCQIDEDLTARINMAD-------AQFSFQQRGRCYYPA 56
           YL+++         K+ N  +     D+  T ++   D       A      +     P 
Sbjct: 152 YLHNRNPPIVHRNLKSPNLLV-----DKKYTVKV--CDFGLSRLKASTFLSSKSAAGTPE 204

Query: 57  WMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIP 116
           WM+PE L+ +P +   E  D++SF V+LWELAT + P+ +L P +V   V  +  R+ IP
Sbjct: 205 WMAPEVLRDEPSN---EKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRLEIP 261

Query: 117 PGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKMKR 153
             ++  ++ +I  C   +P KRP+F  ++ +L  + +
Sbjct: 262 RNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIK 298

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score =  118 bits (298), Expect = 9e-34
 Identities = 36/97 (37%), Positives = 51/97 (52%), Gaps = 3/97 (3%)

Query: 55  PAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRIT 114
            AWM+PE ++        +  D+WS+ VLLWEL T EVPF  +  + V   VA+  L + 
Sbjct: 178 YAWMAPEVIRASMFS---KGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKLALP 234

Query: 115 IPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKM 151
           IP       +KL+  C N DP  RP+F  +L  L  +
Sbjct: 235 IPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score =  108 bits (271), Expect = 1e-29
 Identities = 31/99 (31%), Positives = 51/99 (51%), Gaps = 3/99 (3%)

Query: 55  PAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTP--MEVGMKVALEGLR 112
             WM+PE +  +      E  D +SFA++L+ + T E PF + +   ++    +  EGLR
Sbjct: 190 FQWMAPETIGAEEESYT-EKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLR 248

Query: 113 ITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKM 151
            TIP      L  +I +C + DP KRP F  ++  L ++
Sbjct: 249 PTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score =  107 bits (269), Expect = 4e-29
 Identities = 28/100 (28%), Positives = 51/100 (51%), Gaps = 4/100 (4%)

Query: 55  PAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADL-TPMEVGMKVALEGLRI 113
            AWM+PE  +        E CD++S+ ++LWE+ TR  PF ++  P    M     G R 
Sbjct: 167 AAWMAPEVFEGSNYS---EKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRP 223

Query: 114 TIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKMKR 153
            +   +   +  L+  C ++DP +RP+ + ++ I+  + R
Sbjct: 224 PLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMR 263

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score =  103 bits (260), Expect = 4e-28
 Identities = 32/160 (20%), Positives = 71/160 (44%), Gaps = 23/160 (14%)

Query: 11  YLNSKKS-----KTSNAFLFCCQIDEDLT--------ARINMADAQFSFQQRGRCYYPAW 57
           YL++K       K++N FL      ED T        A    +    S Q         W
Sbjct: 135 YLHAKSIIHRDLKSNNIFL-----HEDNTVKIGDFGLATE-KSRWSGSHQFEQLSGSILW 188

Query: 58  MSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLR----I 113
           M+PE ++ +  +      D+++F ++L+EL T ++P++++   +  +++   G       
Sbjct: 189 MAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLS 248

Query: 114 TIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKMKR 153
            +       + +L+  C+ +   +RP+F  +L  ++++ R
Sbjct: 249 KVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELAR 288

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score =  102 bits (256), Expect = 3e-27
 Identities = 26/100 (26%), Positives = 44/100 (44%), Gaps = 4/100 (4%)

Query: 55  PAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALE-GLRI 113
           P WM+PE +  +  D   E  D++SF ++L E+  R     D  P  +   + +   L  
Sbjct: 186 PYWMAPEMINGRSYD---EKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLDR 242

Query: 114 TIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKMKR 153
             PP        +   C + DP KRP+F  +   L+ ++ 
Sbjct: 243 YCPPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRM 282

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score = 98.2 bits (245), Expect = 1e-25
 Identities = 20/106 (18%), Positives = 49/106 (46%), Gaps = 8/106 (7%)

Query: 55  PAWMSPEALQKKPGDRNL------EACDMWSFAVLLWELATREVPFADLTPMEVGMKVAL 108
              ++PE +++   D         +  D+++   + +EL  RE PF       +  ++  
Sbjct: 198 LCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIWQMG- 256

Query: 109 EGLRITIPP-GISSHLSKLIRICMNEDPGKRPTFDMVLPILDKMKR 153
            G++  +   G+   +S ++  C   +  +RPTF  ++ +L+K+ +
Sbjct: 257 TGMKPNLSQIGMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPK 302

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301

 Score = 90.9 bits (226), Expect = 5e-23
 Identities = 30/120 (25%), Positives = 53/120 (44%), Gaps = 23/120 (19%)

Query: 55  PAWMSPEALQKKPGDRNLEA---CDMWSFAVLLWELATR----------EVPFADLTP-- 99
             +M+PE L +       ++    D+W+F ++LWE+A R          + PF D+ P  
Sbjct: 181 KRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPND 240

Query: 100 ---MEVGMKVALEGLRITIPPGISSH-----LSKLIRICMNEDPGKRPTFDMVLPILDKM 151
               ++   V ++  R  IP    S      L+KL++ C  ++P  R T   +   L K+
Sbjct: 241 PSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337

 Score = 89.8 bits (223), Expect = 2e-22
 Identities = 34/122 (27%), Positives = 52/122 (42%), Gaps = 23/122 (18%)

Query: 55  PAWMSPEALQKKPGDRNLEA---CDMWSFAVLLWELATREV----------PFADLTPME 101
             +M PE L +     + ++    DM+SF ++LWE+A R V          P+ DL P +
Sbjct: 210 KRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSD 269

Query: 102 VGMK-----VALEGLRITIPPGISSH-----LSKLIRICMNEDPGKRPTFDMVLPILDKM 151
              +     V ++ LR + P   SS      + KL+  C   +P  R T   V   L KM
Sbjct: 270 PSYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKM 329

Query: 152 KR 153
             
Sbjct: 330 SE 331

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342

 Score = 88.3 bits (219), Expect = 9e-22
 Identities = 27/122 (22%), Positives = 52/122 (42%), Gaps = 23/122 (18%)

Query: 55  PAWMSPEALQKKPGDRNLEA---CDMWSFAVLLWELATR----------EVPFADLTPM- 100
             +M+PE L      ++ E+    D+++  ++ WE+A R          ++P+ DL P  
Sbjct: 215 KRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSD 274

Query: 101 ----EVGMKVALEGLRITIPPGISSH-----LSKLIRICMNEDPGKRPTFDMVLPILDKM 151
               E+   V  + LR  IP    S      ++K++R C   +   R T   +   L ++
Sbjct: 275 PSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQL 334

Query: 152 KR 153
            +
Sbjct: 335 SQ 336

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score = 79.8 bits (197), Expect = 1e-18
 Identities = 34/166 (20%), Positives = 61/166 (36%), Gaps = 35/166 (21%)

Query: 18  KTSNAFLFCCQIDEDLTARIN---MADAQFSFQQRGRCYY----PAWMSPEALQKKPGDR 70
           K+ N  L       +LTA I    +A    + +  G  +       +M+PE L+     +
Sbjct: 158 KSKNVLL-----KNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQ 212

Query: 71  N--LEACDMWSFAVLLWELATR-----------EVPFADLTPM-----EVGMKVALEGLR 112
                  DM++  ++LWELA+R            +PF +         ++   V  +  R
Sbjct: 213 RDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHPSLEDMQEVVVHKKKR 272

Query: 113 ITIPPGISSH-----LSKLIRICMNEDPGKRPTFDMVLPILDKMKR 153
             +      H     L + I  C + D   R +   V   + +M+R
Sbjct: 273 PVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQR 318

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450

 Score = 78.9 bits (195), Expect = 3e-18
 Identities = 28/98 (28%), Positives = 52/98 (53%), Gaps = 5/98 (5%)

Query: 57  WMSPEALQKKPGDRNLEACDMWSFAVLLWELATR-EVPFADLTPMEVGMKVALEGLRITI 115
           W +PEAL++K   +     D+WSF +LLWE+ +   VP+  +   +V  +V  +G ++  
Sbjct: 352 WTAPEALREK---KFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVE-KGYKMDA 407

Query: 116 PPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKMKR 153
           P G    +  +++ C + D   RPTF  +   L+ ++ 
Sbjct: 408 PDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHIRT 445

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336

 Score = 78.0 bits (192), Expect = 4e-18
 Identities = 21/125 (16%), Positives = 45/125 (36%), Gaps = 28/125 (22%)

Query: 55  PAWMSPEALQ----KKPGDRNLEACDMWSFAVLLWELATR-------------EVPFADL 97
             +M+PE L+     +  +  L+  DM++  ++ WE+  R             ++ F   
Sbjct: 192 IRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQMAFQTE 251

Query: 98  TP-----MEVGMKVALEGLRITIPPGISSH------LSKLIRICMNEDPGKRPTFDMVLP 146
                   ++ + V+ E  R   P     +      L + I  C ++D   R T      
Sbjct: 252 VGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEE 311

Query: 147 ILDKM 151
            + ++
Sbjct: 312 RMAEL 316

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298

 Score = 76.9 bits (190), Expect = 8e-18
 Identities = 28/97 (28%), Positives = 47/97 (48%), Gaps = 7/97 (7%)

Query: 57  WMSPEALQKKPGDRNL-EACDMWSFAVLLWELATR-EVPFADLTPMEVGMKVALEGLRIT 114
           WM+ E+LQ     +      D+WSF VLLWEL TR   P+ D+   ++     L+G R+ 
Sbjct: 198 WMALESLQ----TQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDI-TVYLLQGRRLL 252

Query: 115 IPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKM 151
            P      L +++  C +     RP+F  ++  +  +
Sbjct: 253 QPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 289

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377

 Score = 77.3 bits (191), Expect = 9e-18
 Identities = 28/98 (28%), Positives = 48/98 (48%), Gaps = 5/98 (5%)

Query: 57  WMSPEALQKKPGDRNLEACDMWSFAVLLWELATR-EVPFADLTPMEVGMKVALEGLRITI 115
           W +PEAL      R     D+WSF +LLWE  +    P+ +L+  +    V  +G R+  
Sbjct: 281 WTAPEALNYG---RYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVE-KGGRLPC 336

Query: 116 PPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKMKR 153
           P      + +L+  C   +PG+RP+F  +   L  +++
Sbjct: 337 PELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRK 374

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score = 77.1 bits (190), Expect = 1e-17
 Identities = 22/91 (24%), Positives = 42/91 (46%), Gaps = 4/91 (4%)

Query: 55  PAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRIT 114
           P ++SPE  + KP +      D+W+   +L+EL T +  F   +   + +K+ + G    
Sbjct: 189 PYYLSPEICENKPYN---NKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKI-ISGSFPP 244

Query: 115 IPPGISSHLSKLIRICMNEDPGKRPTFDMVL 145
           +    S  L  L+      +P  RP+ + +L
Sbjct: 245 VSLHYSYDLRSLVSQLFKRNPRDRPSVNSIL 275

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268

 Score = 76.1 bits (188), Expect = 1e-17
 Identities = 28/98 (28%), Positives = 53/98 (54%), Gaps = 5/98 (5%)

Query: 57  WMSPEALQKKPGDRNLEACDMWSFAVLLWELATR-EVPFADLTPMEVGMKVALEGLRITI 115
           W +PE        +     D+W+F +L+WE+ +  ++P+   T  EV +KV+ +G R+  
Sbjct: 171 WSAPEVFHYF---KYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVS-QGHRLYR 226

Query: 116 PPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKMKR 153
           P   S  + +++  C +E P KRPTF  +L  ++ ++ 
Sbjct: 227 PHLASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLRE 264

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452

 Score = 77.5 bits (191), Expect = 1e-17
 Identities = 32/98 (32%), Positives = 47/98 (47%), Gaps = 5/98 (5%)

Query: 57  WMSPEALQKKPGDRNLEACDMWSFAVLLWELATR-EVPFADLTPMEVGMKVALEGLRITI 115
           W +PEA       R     D+WSF +LL EL T+  VP+  +   EV  +V   G R+  
Sbjct: 347 WTAPEAALYG---RFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE-RGYRMPC 402

Query: 116 PPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKMKR 153
           PP     L  L+  C  ++P +RPTF+ +   L+    
Sbjct: 403 PPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFT 440

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288

 Score = 76.1 bits (188), Expect = 1e-17
 Identities = 27/98 (27%), Positives = 47/98 (47%), Gaps = 5/98 (5%)

Query: 57  WMSPEALQKKPGDRNLEACDMWSFAVLLWELATR-EVPFADLTPMEVGMKVALEGLRITI 115
           W +PE+L      +     D+W+F VLLWE+AT    P+  +   +V   +  +  R+  
Sbjct: 178 WTAPESLAYN---KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE-KDYRMER 233

Query: 116 PPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKMKR 153
           P G    + +L+R C   +P  RP+F  +    + M +
Sbjct: 234 PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 271

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535

 Score = 77.2 bits (190), Expect = 1e-17
 Identities = 32/98 (32%), Positives = 47/98 (47%), Gaps = 5/98 (5%)

Query: 57  WMSPEALQKKPGDRNLEACDMWSFAVLLWELATR-EVPFADLTPMEVGMKVALEGLRITI 115
           W +PEA       R     D+WSF +LL EL T+  VP+  +   EV  +V   G R+  
Sbjct: 430 WTAPEAALYG---RFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE-RGYRMPC 485

Query: 116 PPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKMKR 153
           PP     L  L+  C  ++P +RPTF+ +   L+    
Sbjct: 486 PPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFT 523

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278

 Score = 75.7 bits (187), Expect = 2e-17
 Identities = 28/98 (28%), Positives = 53/98 (54%), Gaps = 5/98 (5%)

Query: 57  WMSPEALQKKPGDRNLEACDMWSFAVLLWELATR-EVPFADLTPMEVGMKVALEGLRITI 115
           W +PEAL++K   +     D+WSF +LLWE+ +   VP+  +   +V  +V  +G ++  
Sbjct: 180 WTAPEALREK---KFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVE-KGYKMDA 235

Query: 116 PPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKMKR 153
           P G    + ++++ C + D   RP+F  +   L+ +K 
Sbjct: 236 PDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKT 273

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495

 Score = 76.7 bits (189), Expect = 2e-17
 Identities = 27/98 (27%), Positives = 47/98 (47%), Gaps = 5/98 (5%)

Query: 57  WMSPEALQKKPGDRNLEACDMWSFAVLLWELATR-EVPFADLTPMEVGMKVALEGLRITI 115
           W +PE+L      +     D+W+F VLLWE+AT    P+  +   +V   +  +  R+  
Sbjct: 385 WTAPESLAYN---KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE-KDYRMER 440

Query: 116 PPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKMKR 153
           P G    + +L+R C   +P  RP+F  +    + M +
Sbjct: 441 PEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 478

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281

 Score = 75.7 bits (187), Expect = 2e-17
 Identities = 28/99 (28%), Positives = 43/99 (43%), Gaps = 7/99 (7%)

Query: 57  WMSPEALQKKPGDRNL-EACDMWSFAVLLWELATR-EVPFADLTPMEVGMKVALEGLRIT 114
           WM+PE++      R    A D+W F V +WE+      PF  +   +V +     G R+ 
Sbjct: 183 WMAPESIN----FRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDV-IGRIENGERLP 237

Query: 115 IPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKMKR 153
           +PP     L  L+  C   DP +RP F  +   L  +  
Sbjct: 238 MPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILE 276

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373

 Score = 76.3 bits (188), Expect = 2e-17
 Identities = 28/97 (28%), Positives = 47/97 (48%), Gaps = 7/97 (7%)

Query: 57  WMSPEALQKKPGDRNL-EACDMWSFAVLLWELATR-EVPFADLTPMEVGMKVALEGLRIT 114
           WM+ E+LQ     +      D+WSF VLLWEL TR   P+ D+   ++     L+G R+ 
Sbjct: 262 WMALESLQ----TQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDI-TVYLLQGRRLL 316

Query: 115 IPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKM 151
            P      L +++  C +     RP+F  ++  +  +
Sbjct: 317 QPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 353

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327

 Score = 75.7 bits (187), Expect = 3e-17
 Identities = 27/99 (27%), Positives = 45/99 (45%), Gaps = 7/99 (7%)

Query: 57  WMSPEALQKKPGDRNL-EACDMWSFAVLLWELATR-EVPFADLTPMEVGMKVALEGLRIT 114
           WM+ E++      R      D+WS+ V +WEL T    P+  +   E+   +  +G R+ 
Sbjct: 185 WMALESIL----HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI-SSILEKGERLP 239

Query: 115 IPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKMKR 153
            PP  +  +  ++R C   D   RP F  ++    KM R
Sbjct: 240 QPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMAR 278

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656

 Score = 76.4 bits (188), Expect = 3e-17
 Identities = 28/99 (28%), Positives = 43/99 (43%), Gaps = 7/99 (7%)

Query: 57  WMSPEALQKKPGDRNL-EACDMWSFAVLLWELATR-EVPFADLTPMEVGMKVALEGLRIT 114
           WM+PE++      R    A D+W F V +WE+      PF  +   +V +     G R+ 
Sbjct: 558 WMAPESIN----FRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDV-IGRIENGERLP 612

Query: 115 IPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKMKR 153
           +PP     L  L+  C   DP +RP F  +   L  +  
Sbjct: 613 MPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILE 651

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267

 Score = 74.9 bits (185), Expect = 3e-17
 Identities = 29/98 (29%), Positives = 49/98 (50%), Gaps = 5/98 (5%)

Query: 57  WMSPEALQKKPGDRNLEACDMWSFAVLLWELATR-EVPFADLTPMEVGMKVALEGLRITI 115
           W SPE        R     D+WSF VL+WE+ +  ++P+ + +  EV   ++  G R+  
Sbjct: 171 WASPEVFSFS---RYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDIS-TGFRLYK 226

Query: 116 PPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKMKR 153
           P   S+H+ +++  C  E P  RP F  +L  L ++  
Sbjct: 227 PRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAE 264

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323

 Score = 75.4 bits (186), Expect = 3e-17
 Identities = 27/97 (27%), Positives = 48/97 (49%), Gaps = 7/97 (7%)

Query: 57  WMSPEALQKKPGDRNL-EACDMWSFAVLLWELATR-EVPFADLTPMEVGMKVALEGLRIT 114
           W++ E+L     D       D+W+F V +WE+ TR + P+A +   E+     + G R+ 
Sbjct: 205 WLALESLA----DNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEI-YNYLIGGNRLK 259

Query: 115 IPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKM 151
            PP     +  L+  C + DP +RP+F  +   L+ +
Sbjct: 260 QPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENI 296

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322

 Score = 75.4 bits (186), Expect = 3e-17
 Identities = 33/97 (34%), Positives = 52/97 (53%), Gaps = 7/97 (7%)

Query: 57  WMSPEALQKKPGDRNL-EACDMWSFAVLLWELATR-EVPFADLTPMEVGMKVALEGLRIT 114
           WMSPE+L+    D       D+WSF V+LWE+AT  E P+  L+  +V   V +EG  + 
Sbjct: 206 WMSPESLK----DGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFV-MEGGLLD 260

Query: 115 IPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKM 151
            P      L +L+R+C   +P  RP+F  ++  + + 
Sbjct: 261 KPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEE 297

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291

 Score = 75.0 bits (185), Expect = 4e-17
 Identities = 27/97 (27%), Positives = 44/97 (45%), Gaps = 4/97 (4%)

Query: 57  WMSPEALQKKPGDRNLEACDMWSFAVLLWELATR-EVPFADLTPMEVGMKVALEGLRITI 115
           W +PE+L+ +       A D W F V LWE+ T  + P+  L   ++  K+  EG R+  
Sbjct: 190 WCAPESLKTR---TFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPR 246

Query: 116 PPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKMK 152
           P      +  ++  C    P  RPTF  +   L + +
Sbjct: 247 PEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQ 283

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454

 Score = 75.9 bits (187), Expect = 4e-17
 Identities = 27/98 (27%), Positives = 44/98 (44%), Gaps = 5/98 (5%)

Query: 57  WMSPEALQKKPGDRNLEACDMWSFAVLLWELATR-EVPFADLTPMEVGMKVALEGLRITI 115
           W +PEA+            D+WSF +LL E+ T   +P+  ++  EV   +   G R+  
Sbjct: 351 WTAPEAINFG---SFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALE-RGYRMPR 406

Query: 116 PPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKMKR 153
           P      L  ++  C    P +RPTF+ +  +LD    
Sbjct: 407 PENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYT 444

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325

 Score = 75.0 bits (185), Expect = 5e-17
 Identities = 32/98 (32%), Positives = 53/98 (54%), Gaps = 5/98 (5%)

Query: 57  WMSPEALQKKPGDRNLEACDMWSFAVLLWELATR-EVPFADLTPMEVGMKVALEGLRITI 115
           W +PEA+  +       A D+WSF V++WE+    E P+ ++T  +V   V  EG R+  
Sbjct: 220 WTAPEAIAFR---TFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVE-EGYRLPA 275

Query: 116 PPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKMKR 153
           P G    L +L+  C ++D  +RP F  ++ +LD + R
Sbjct: 276 PMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIR 313

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279

 Score = 74.6 bits (184), Expect = 5e-17
 Identities = 31/96 (32%), Positives = 47/96 (48%), Gaps = 5/96 (5%)

Query: 57  WMSPEALQKKPGDRNLEACDMWSFAVLLWELATR-EVPFADLTPMEVGMKVALEGLRITI 115
           W +PEA+            D+WSF +LL E+ T   +P+  +T  EV   +   G R+  
Sbjct: 176 WTAPEAINYG---TFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLE-RGYRMVR 231

Query: 116 PPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKM 151
           P      L +L+R+C  E P  RPTFD +  +L+  
Sbjct: 232 PDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDF 267

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373

 Score = 75.1 bits (185), Expect = 6e-17
 Identities = 32/98 (32%), Positives = 56/98 (57%), Gaps = 5/98 (5%)

Query: 57  WMSPEALQKKPGDRNLEACDMWSFAVLLWELATR-EVPFADLTPMEVGMKVALEGLRITI 115
           W SPEA+  +   +   A D+WS+ ++LWE+ +  E P+ +++  +V +K   EG R+  
Sbjct: 216 WTSPEAIAYR---KFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDV-IKAVDEGYRLPP 271

Query: 116 PPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKMKR 153
           P    + L +L+  C  +D   RP F+ ++ ILDK+ R
Sbjct: 272 PMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIR 309

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283

 Score = 74.2 bits (183), Expect = 6e-17
 Identities = 27/98 (27%), Positives = 48/98 (48%), Gaps = 5/98 (5%)

Query: 57  WMSPEALQKKPGDRNLEACDMWSFAVLLWELATR-EVPFADLTPMEVGMKVALEGLRITI 115
           W  PE L      +     D+W+F VL+WE+ +  ++P+   T  E    +A +GLR+  
Sbjct: 187 WSPPEVLMYS---KFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIA-QGLRLYR 242

Query: 116 PPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKMKR 153
           P   S  +  ++  C +E   +RPTF ++L  +  +  
Sbjct: 243 PHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVMD 280

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333

 Score = 74.7 bits (184), Expect = 6e-17
 Identities = 33/98 (33%), Positives = 56/98 (57%), Gaps = 5/98 (5%)

Query: 57  WMSPEALQKKPGDRNLEACDMWSFAVLLWELATR-EVPFADLTPMEVGMKVALEGLRITI 115
           W +PEA+  +   +   A D+WSF +++WE+ T  E P+ +L+  EV MK   +G R+  
Sbjct: 216 WTAPEAISYR---KFTSASDVWSFGIVMWEVMTYGERPYWELSNHEV-MKAINDGFRLPT 271

Query: 116 PPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKMKR 153
           P    S + +L+  C  ++  +RP F  ++ ILDK+ R
Sbjct: 272 PMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIR 309

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327

 Score = 74.7 bits (184), Expect = 7e-17
 Identities = 27/97 (27%), Positives = 42/97 (43%), Gaps = 7/97 (7%)

Query: 57  WMSPEALQKKPGDRNL-EACDMWSFAVLLWELATR-EVPFADLTPMEVGMKVALEGLRIT 114
           WM PEA      +       D WSF VLLWE+ +   +P+   +  EV   V   G R+ 
Sbjct: 211 WMPPEAFM----EGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFV-TSGGRMD 265

Query: 115 IPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKM 151
            P      + +++  C    P  RP F ++L  ++  
Sbjct: 266 PPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYC 302

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313

 Score = 74.2 bits (183), Expect = 8e-17
 Identities = 30/97 (30%), Positives = 48/97 (49%), Gaps = 7/97 (7%)

Query: 57  WMSPEALQKKPGDRNL-EACDMWSFAVLLWELATR-EVPFADLTPMEVGMKVALEGLRIT 114
           W++ E+L     DR      D+W+F V +WE+ATR   P+  +   E+     L G R+ 
Sbjct: 215 WIAIESLA----DRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEM-YDYLLHGHRLK 269

Query: 115 IPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKM 151
            P      L +++  C   DP  RPTF ++   L+K+
Sbjct: 270 QPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKL 306

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289

 Score = 73.9 bits (182), Expect = 8e-17
 Identities = 19/101 (18%), Positives = 44/101 (43%), Gaps = 8/101 (7%)

Query: 55  PAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRIT 114
             +++ E LQ+     +L   D+++ A+ +   A  E    +        +    G    
Sbjct: 194 SRFLANEVLQENYT--HLPKADIFALALTVVCAAGAEPLPRNGDQWHEIRQ----GRLPR 247

Query: 115 IPPGISSHLSKLIRICMNEDPGKRPTFDMVL--PILDKMKR 153
           IP  +S   ++L+++ ++ DP +RP+   ++   +L    R
Sbjct: 248 IPQVLSQEFTELLKVMIHPDPERRPSAMALVKHSVLLSASR 288

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329

 Score = 74.6 bits (184), Expect = 8e-17
 Identities = 25/99 (25%), Positives = 44/99 (44%), Gaps = 7/99 (7%)

Query: 57  WMSPEALQKKPGDRNL-EACDMWSFAVLLWELATR-EVPFADLTPMEVGMKVALEGLRIT 114
           WM PE++      R      D+WSF V+LWE+ T  + P+  L+  E  +    +G  + 
Sbjct: 226 WMPPESIL----YRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEA-IDCITQGRELE 280

Query: 115 IPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKMKR 153
            P      +  ++R C   +P +R +   V   L  + +
Sbjct: 281 RPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQ 319

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score = 73.5 bits (181), Expect = 1e-16
 Identities = 29/98 (29%), Positives = 48/98 (48%), Gaps = 6/98 (6%)

Query: 55  PAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRIT 114
           P +MSPE + +   +   E  D+WS   LL+EL     PF   +  E+  K+  EG    
Sbjct: 180 PYYMSPEQMNRMSYN---EKSDIWSLGCLLYELCALMPPFTAFSQKELAGKI-REGKFRR 235

Query: 115 IPPGISSHLSKLIRICMNEDPGKRPTFDMVL--PILDK 150
           IP   S  L+++I   +N     RP+ + +L  P++ +
Sbjct: 236 IPYRYSDELNEIITRMLNLKDYHRPSVEEILENPLILE 273

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score = 74.5 bits (183), Expect = 1e-16
 Identities = 19/100 (19%), Positives = 37/100 (37%), Gaps = 9/100 (9%)

Query: 55  PAWMSPEALQKKPGDRNLE--------ACDMWSFAVLLWELATREVPFADLT-PMEVGMK 105
             +M PEA++     R             D+WS   +L+ +   + PF  +   +     
Sbjct: 220 VNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHA 279

Query: 106 VALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVL 145
           +      I  P      L  +++ C+  DP +R +   +L
Sbjct: 280 IIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 319

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281

 Score = 73.8 bits (182), Expect = 1e-16
 Identities = 31/99 (31%), Positives = 48/99 (48%), Gaps = 7/99 (7%)

Query: 57  WMSPEALQKKPGDRNL-EACDMWSFAVLLWELATR-EVPFADLTPMEVGMKVALEGLRIT 114
           WMSPE++      R    A D+W FAV +WE+ +  + PF  L   +V + V  +G R+ 
Sbjct: 180 WMSPESIN----FRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDV-IGVLEKGDRLP 234

Query: 115 IPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKMKR 153
            P      L  L+  C + DP  RP F  ++  L  + +
Sbjct: 235 KPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQ 273

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298

 Score = 73.8 bits (182), Expect = 1e-16
 Identities = 30/96 (31%), Positives = 50/96 (52%), Gaps = 5/96 (5%)

Query: 57  WMSPEALQKKPGDRNLEACDMWSFAVLLWELATR-EVPFADLTPMEVGMKVALEGLRITI 115
           W + E+LQ     R     D+WSF VLLWEL TR   P+  + P ++      +G R+  
Sbjct: 194 WTALESLQTY---RFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDL-THFLAQGRRLPQ 249

Query: 116 PPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKM 151
           P      L ++++ C   DP  RPTF +++  ++++
Sbjct: 250 PEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQI 285

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score = 73.9 bits (182), Expect = 1e-16
 Identities = 19/100 (19%), Positives = 37/100 (37%), Gaps = 9/100 (9%)

Query: 55  PAWMSPEALQKKPGDRNL--------EACDMWSFAVLLWELATREVPFADLT-PMEVGMK 105
             +M PEA++     R             D+WS   +L+ +   + PF  +   +     
Sbjct: 192 VNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHA 251

Query: 106 VALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVL 145
           +      I  P      L  +++ C+  DP +R +   +L
Sbjct: 252 IIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 291

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367

 Score = 74.4 bits (183), Expect = 1e-16
 Identities = 27/97 (27%), Positives = 42/97 (43%), Gaps = 7/97 (7%)

Query: 57  WMSPEALQKKPGDRNL-EACDMWSFAVLLWELATR-EVPFADLTPMEVGMKVALEGLRIT 114
           WM PEA      +       D WSF VLLWE+ +   +P+   +  EV   V   G R+ 
Sbjct: 252 WMPPEAFM----EGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFV-TSGGRMD 306

Query: 115 IPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKM 151
            P      + +++  C    P  RP F ++L  ++  
Sbjct: 307 PPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYC 343

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score = 73.5 bits (181), Expect = 1e-16
 Identities = 23/99 (23%), Positives = 41/99 (41%), Gaps = 1/99 (1%)

Query: 55  PAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPF-ADLTPMEVGMKVALEGLRI 113
            ++ +PE    +      E  D+WS   +L+ +   E P+       +         L I
Sbjct: 207 ISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQNQLSI 266

Query: 114 TIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKMK 152
              P  SS L +L+   M  DP +RP   ++L  L+ ++
Sbjct: 267 PQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQ 305

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score = 74.0 bits (182), Expect = 1e-16
 Identities = 19/100 (19%), Positives = 37/100 (37%), Gaps = 9/100 (9%)

Query: 55  PAWMSPEALQKKPGDRNL--------EACDMWSFAVLLWELATREVPFADLT-PMEVGMK 105
             +M PEA++     R             D+WS   +L+ +   + PF  +   +     
Sbjct: 173 VNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHA 232

Query: 106 VALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVL 145
           +      I  P      L  +++ C+  DP +R +   +L
Sbjct: 233 IIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 272

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325

 Score = 73.5 bits (181), Expect = 2e-16
 Identities = 27/98 (27%), Positives = 44/98 (44%), Gaps = 5/98 (5%)

Query: 57  WMSPEALQKKPGDRNLEACDMWSFAVLLWELATR-EVPFADLTPMEVGMKVALEGLRITI 115
           WM+ E++      +     D+WS+ V +WEL T    P+A L   EV   +  +G R+  
Sbjct: 183 WMALESIHFG---KYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEV-PDLLEKGERLAQ 238

Query: 116 PPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKMKR 153
           P   +  +  ++  C   D   RPTF  +     +M R
Sbjct: 239 PQICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMAR 276

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327

 Score = 72.7 bits (179), Expect = 3e-16
 Identities = 25/98 (25%), Positives = 44/98 (44%), Gaps = 5/98 (5%)

Query: 57  WMSPEALQKKPGDRNLEACDMWSFAVLLWELATR-EVPFADLTPMEVGMKVALEGLRITI 115
           WM+ E++  +         D+WS+ V +WEL T    P+  +   E+   +  +G R+  
Sbjct: 185 WMALESILHR---IYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI-SSILEKGERLPQ 240

Query: 116 PPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKMKR 153
           PP  +  +  ++  C   D   RP F  ++    KM R
Sbjct: 241 PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 278

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287

 Score = 71.9 bits (177), Expect = 5e-16
 Identities = 23/96 (23%), Positives = 39/96 (40%), Gaps = 5/96 (5%)

Query: 57  WMSPEALQKKPGDRNLEACDMWSFAVLLWELATR-EVPFADLTPMEVGMKVALEGLRITI 115
           W +PE +  +   +     D+WS+ V +WE  +  + P+  +   EV   +  +G R+  
Sbjct: 179 WYAPECINFR---KFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIE-QGKRMEC 234

Query: 116 PPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKM 151
           PP     L  L+  C       RP F  V   +   
Sbjct: 235 PPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRAC 270

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289

 Score = 71.2 bits (175), Expect = 8e-16
 Identities = 23/98 (23%), Positives = 41/98 (41%), Gaps = 10/98 (10%)

Query: 57  WMSPEALQKKPGDRNL--EACDMWSFAVLLWELATR-EVPFADLTPMEVGMKVALEGLRI 113
           W+ PE ++    +      A D WSF   LWE+ +  + P + L           +  ++
Sbjct: 183 WVPPECIE----NPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFYE-DRHQL 237

Query: 114 TIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKM 151
             P         LI  CM+ +P  RP+F  ++  L+ +
Sbjct: 238 PAPKAAELA--NLINNCMDYEPDHRPSFRAIIRDLNSL 273

>3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297

 Score = 71.5 bits (176), Expect = 9e-16
 Identities = 25/99 (25%), Positives = 45/99 (45%), Gaps = 7/99 (7%)

Query: 57  WMSPEALQKKPGDRNL-EACDMWSFAVLLWELATR-EVPFADLTPMEVGMKVALEGLRIT 114
           WM PE++      R      D+WSF V+LWE+ T  + P+  L+  EV ++   +G  + 
Sbjct: 201 WMPPESIM----YRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEV-IECITQGRVLE 255

Query: 115 IPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKMKR 153
            P      +  ++  C   +P +R     +  IL  + +
Sbjct: 256 RPRVCPKEVYDVMLGCWQREPQQRLNIKEIYKILHALGK 294

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291

 Score = 71.1 bits (175), Expect = 9e-16
 Identities = 26/96 (27%), Positives = 41/96 (42%), Gaps = 5/96 (5%)

Query: 57  WMSPEALQKKPGDRNLEACDMWSFAVLLWELATR-EVPFADLTPMEVGMKVALEGLRITI 115
           W +PE +      +     D+WSF VL+WE  +  + P+  +   EV   +  +G R+  
Sbjct: 186 WYAPECINYY---KFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE-KGERMGC 241

Query: 116 PPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKM 151
           P G    +  L+ +C   D   RP F  V   L   
Sbjct: 242 PAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNY 277

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613

 Score = 71.9 bits (176), Expect = 1e-15
 Identities = 24/96 (25%), Positives = 39/96 (40%), Gaps = 5/96 (5%)

Query: 57  WMSPEALQKKPGDRNLEACDMWSFAVLLWELATR-EVPFADLTPMEVGMKVALEGLRITI 115
           W +PE +  +   +     D+WS+ V +WE  +  + P+  +   EV M    +G R+  
Sbjct: 505 WYAPECINFR---KFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEV-MAFIEQGKRMEC 560

Query: 116 PPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKM 151
           PP     L  L+  C       RP F  V   +   
Sbjct: 561 PPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRAC 596

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327

 Score = 71.2 bits (175), Expect = 1e-15
 Identities = 29/97 (29%), Positives = 48/97 (49%), Gaps = 7/97 (7%)

Query: 57  WMSPEALQKKPGDRNL-EACDMWSFAVLLWELATR-EVPFADLTPMEVGMKVALEGLRIT 114
           WM+ E+L             D+WS+ VLLWE+ +    P+  +T  E+  +   +G R+ 
Sbjct: 207 WMAIESLN----YSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAEL-YEKLPQGYRLE 261

Query: 115 IPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKM 151
            P      +  L+R C  E P +RP+F  +L  L++M
Sbjct: 262 KPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRM 298

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score = 70.1 bits (172), Expect = 2e-15
 Identities = 19/92 (20%), Positives = 45/92 (48%), Gaps = 5/92 (5%)

Query: 55  PAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRIT 114
           P +M+PE  ++K      E+ D+++F + + E+AT E P+++        +    G++  
Sbjct: 194 PEFMAPEMYEEKYD----ESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPA 249

Query: 115 IPPGISSHLSK-LIRICMNEDPGKRPTFDMVL 145
               ++    K +I  C+ ++  +R +   +L
Sbjct: 250 SFDKVAIPEVKEIIEGCIRQNKDERYSIKDLL 281

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343

 Score = 70.4 bits (173), Expect = 2e-15
 Identities = 26/99 (26%), Positives = 46/99 (46%), Gaps = 7/99 (7%)

Query: 57  WMSPEALQKKPGDRNL-EACDMWSFAVLLWELATR-EVPFADLTPMEVGMKVALEGLRIT 114
           WM PE++             D+W++ V+LWE+ +    P+  +   EV +    +G  + 
Sbjct: 242 WMPPESIF----YNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEV-IYYVRDGNILA 296

Query: 115 IPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKMKR 153
            P      L  L+R+C ++ P  RP+F  +  IL +M  
Sbjct: 297 CPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCE 335

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334

 Score = 70.0 bits (172), Expect = 4e-15
 Identities = 34/97 (35%), Positives = 53/97 (54%), Gaps = 7/97 (7%)

Query: 57  WMSPEALQKKPGDRNL-EACDMWSFAVLLWELATR-EVPFADLTPMEVGMKVALEGLRIT 114
           WM+PEAL     DR      D+WSF VL+WE+ T    P+  +   E+  K+  EG R+ 
Sbjct: 225 WMAPEALF----DRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL-FKLLKEGHRMD 279

Query: 115 IPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKM 151
            P   ++ L  ++R C +  P +RPTF  ++  LD++
Sbjct: 280 KPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316

>3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289

 Score = 69.2 bits (170), Expect = 4e-15
 Identities = 24/97 (24%), Positives = 43/97 (44%), Gaps = 7/97 (7%)

Query: 57  WMSPEALQKKPGDRNL-EACDMWSFAVLLWELATR-EVPFADLTPMEVGMKVALEGLRIT 114
           WM+PEA+             D+WS+ V+LWE+ +    P+   +  +V +++      + 
Sbjct: 196 WMAPEAIM----YGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDV-VEMIRNRQVLP 250

Query: 115 IPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKM 151
            P    + +  L+  C NE P +RP F  +   L   
Sbjct: 251 CPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAW 287

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314

 Score = 69.2 bits (170), Expect = 6e-15
 Identities = 31/97 (31%), Positives = 47/97 (48%), Gaps = 7/97 (7%)

Query: 57  WMSPEALQKKPGDRNL-EACDMWSFAVLLWELATR-EVPFADLTPMEVGMKVALEGLRIT 114
           WM+ E+L     D       D+WSF VLLWE+ T    P+  + P  +   +   G R+ 
Sbjct: 218 WMAIESLF----DHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERL-FNLLKTGHRME 272

Query: 115 IPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKM 151
            P   S  + +L+  C  ++P KRP F  +   L+KM
Sbjct: 273 RPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKM 309

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370

 Score = 69.3 bits (170), Expect = 7e-15
 Identities = 34/97 (35%), Positives = 53/97 (54%), Gaps = 7/97 (7%)

Query: 57  WMSPEALQKKPGDRNL-EACDMWSFAVLLWELATR-EVPFADLTPMEVGMKVALEGLRIT 114
           WM+PEAL     DR      D+WSF VL+WE+ T    P+  +   E+  K+  EG R+ 
Sbjct: 271 WMAPEALF----DRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL-FKLLKEGHRMD 325

Query: 115 IPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKM 151
            P   ++ L  ++R C +  P +RPTF  ++  LD++
Sbjct: 326 KPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 362

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382

 Score = 69.3 bits (170), Expect = 7e-15
 Identities = 35/97 (36%), Positives = 53/97 (54%), Gaps = 7/97 (7%)

Query: 57  WMSPEALQKKPGDRNL-EACDMWSFAVLLWELATR-EVPFADLTPMEVGMKVALEGLRIT 114
           WM+PEAL     DR      D+WSF VLLWE+ T    P+  +   E+  K+  EG R+ 
Sbjct: 259 WMAPEALF----DRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEEL-FKLLKEGHRMD 313

Query: 115 IPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKM 151
            P   ++ L  ++R C +  P +RPTF  ++  LD++
Sbjct: 314 KPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 350

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336

 Score = 68.6 bits (168), Expect = 1e-14
 Identities = 19/87 (21%), Positives = 37/87 (42%), Gaps = 4/87 (4%)

Query: 55  PAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEG-LRI 113
              M+PE +  KP D      D+WS   ++  +     P+       + +K+A E     
Sbjct: 220 ETHMAPEVVMGKPCDA---KVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIASEPPPIR 276

Query: 114 TIPPGISSHLSKLIRICMNEDPGKRPT 140
            IPP  +   ++ I+  + ++P  R +
Sbjct: 277 EIPPSCAPLTAQAIQEGLRKEPVHRAS 303

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score = 67.3 bits (165), Expect = 2e-14
 Identities = 16/101 (15%), Positives = 35/101 (34%), Gaps = 11/101 (10%)

Query: 55  PAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRIT 114
             +MSPE +  +      +  D+++  ++L EL        + +      K   +     
Sbjct: 185 LRYMSPEQISSQDYG---KEVDLYALGLILAELLHVCDTAFETS------KFFTDLRDGI 235

Query: 115 IPPGISSHLSKLIRICMNEDPGKRPTFDMVL--PILDKMKR 153
           I          L++  +++ P  RP    +L    + K   
Sbjct: 236 ISDIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKSP 276

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score = 67.3 bits (165), Expect = 3e-14
 Identities = 28/102 (27%), Positives = 47/102 (46%), Gaps = 7/102 (6%)

Query: 55  PAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFA--DLTPMEVGMKVALEGLR 112
           P +MSPE + +   +      D+WS   LL+E+A  + PF    +    +  K+  +   
Sbjct: 200 PYYMSPERIHENGYN---FKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKI-EQCDY 255

Query: 113 ITIPPGI-SSHLSKLIRICMNEDPGKRPTFDMVLPILDKMKR 153
             +P    S  L +L+ +C+N DP KRP    V  +  +M  
Sbjct: 256 PPLPSDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHA 297

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score = 67.3 bits (165), Expect = 3e-14
 Identities = 24/99 (24%), Positives = 42/99 (42%), Gaps = 11/99 (11%)

Query: 55  PAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPM-EVGMKVALEGLRI 113
           P +M+PE LQ   G     A D++S  + + E+A             ++        L  
Sbjct: 220 PRYMAPELLQGSYG----TAADVFSLGLTILEVACNMELPHGGEGWQQLRQGY----LPP 271

Query: 114 TIPPGISSHLSKLIRICMNEDPGKRPTFDMVL--PILDK 150
               G+SS L  ++ + +  DP  R T + +L  P+L +
Sbjct: 272 EFTAGLSSELRSVLVMMLEPDPKLRATAEALLALPVLRQ 310

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316

 Score = 67.3 bits (165), Expect = 3e-14
 Identities = 28/97 (28%), Positives = 47/97 (48%), Gaps = 6/97 (6%)

Query: 57  WMSPEALQKKPGDRNL-EACDMWSFAVLLWELATR-EVPFADLTPMEVGMKVALEGLRIT 114
           WM+PE +     DR      D+WSF VLLWE+ +    P+  +   E   +   EG R+ 
Sbjct: 216 WMAPETIF----DRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMR 271

Query: 115 IPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKM 151
            P   +  + + +  C + +P +RPTF  ++  L  +
Sbjct: 272 APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 308

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303

 Score = 67.0 bits (164), Expect = 3e-14
 Identities = 28/90 (31%), Positives = 44/90 (48%), Gaps = 12/90 (13%)

Query: 55  PAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRIT 114
           P WM+PE +++   D      D+WS  +   ELA  E P ++L PM+V   +        
Sbjct: 183 PFWMAPEVIKQSAYD---SKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNN---- 235

Query: 115 IPPGISSHLSKL----IRICMNEDPGKRPT 140
            PP +  + SK     +  C+N++P  RPT
Sbjct: 236 -PPTLEGNYSKPLKEFVEACLNKEPSFRPT 264

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295

 Score = 66.6 bits (163), Expect = 5e-14
 Identities = 27/87 (31%), Positives = 39/87 (44%), Gaps = 2/87 (2%)

Query: 55  PAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLT-PMEVGMKVALEGLRI 113
             +M+PE + K P      A D+WS    + E+AT + PF +L  P     KV +  +  
Sbjct: 187 LQYMAPEIIDKGPRGYGK-AADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHP 245

Query: 114 TIPPGISSHLSKLIRICMNEDPGKRPT 140
            IP  +S+     I  C   DP KR  
Sbjct: 246 EIPESMSAEAKAFILKCFEPDPDKRAC 272

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295

 Score = 66.5 bits (163), Expect = 5e-14
 Identities = 23/113 (20%), Positives = 45/113 (39%), Gaps = 20/113 (17%)

Query: 57  WMSPEALQKKPGDRNLEACDMWSFAVLLWELATR----------------EVPFADLTPM 100
           W +PE+L +    +   A D+WSF V+L+EL T                       +   
Sbjct: 183 WYAPESLTES---KFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVF 239

Query: 101 EVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKMKR 153
            +   +     R+  P G    +  ++  C N +  +RP+F  +   +D+++ 
Sbjct: 240 HLIELLK-NNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD 291

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344

 Score = 66.2 bits (162), Expect = 8e-14
 Identities = 23/97 (23%), Positives = 43/97 (44%), Gaps = 6/97 (6%)

Query: 57  WMSPEALQKKPGDRNL-EACDMWSFAVLLWELATR-EVPFADLTPMEVGMKVALEGLRIT 114
           WM+PE+L     +       D+WS+ +LLWE+ +    P+  +       K+   G ++ 
Sbjct: 240 WMAPESLF----EGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQNGFKMD 295

Query: 115 IPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKM 151
            P   +  +  +++ C   D  KRP+F  +   L   
Sbjct: 296 QPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQ 332

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313

 Score = 65.7 bits (161), Expect = 9e-14
 Identities = 26/97 (26%), Positives = 49/97 (50%), Gaps = 6/97 (6%)

Query: 57  WMSPEALQKKPGDRNL-EACDMWSFAVLLWELATR-EVPFADLTPMEVGMKVALEGLRIT 114
           WM+PE++     +       D+WS+ + LWEL +    P+  +       K+  EG R+ 
Sbjct: 213 WMAPESIF----NCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRML 268

Query: 115 IPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKM 151
            P    + +  +++ C + DP KRPTF  ++ +++K 
Sbjct: 269 SPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQ 305

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326

 Score = 65.9 bits (161), Expect = 1e-13
 Identities = 23/111 (20%), Positives = 44/111 (39%), Gaps = 20/111 (18%)

Query: 57  WMSPEALQKKPGDRNLEACDMWSFAVLLWELATR----------------EVPFADLTPM 100
           W +PE+L +    +   A D+WSF V+L+EL T                       +   
Sbjct: 214 WYAPESLTES---KFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVF 270

Query: 101 EVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKM 151
            +   +     R+  P G    +  ++  C N +  +RP+F  +   +D++
Sbjct: 271 HLIELLK-NNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 320

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302

 Score = 65.4 bits (160), Expect = 1e-13
 Identities = 26/112 (23%), Positives = 43/112 (38%), Gaps = 19/112 (16%)

Query: 57  WMSPEALQKKPGDRNLEACDMWSFAVLLWELATR---------------EVPFADLTPME 101
           W +PE L +    +   A D+WSF V L EL T                      +T   
Sbjct: 195 WYAPECLMQS---KFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTR 251

Query: 102 VGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKMKR 153
           + +    EG R+  PP     + +L+R C    P  R +F  ++   + + +
Sbjct: 252 L-VNTLKEGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALLK 302

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score = 64.3 bits (157), Expect = 3e-13
 Identities = 20/95 (21%), Positives = 38/95 (40%), Gaps = 10/95 (10%)

Query: 55  PAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRIT 114
             +++ E L         E  DM+S  ++ +E+         +  + + +K       I 
Sbjct: 194 AMYVATEVLDGTGHYN--EKIDMYSLGIIFFEMIYP--FSTGMERVNI-LKKLRSV-SIE 247

Query: 115 IPPGISSHLSK----LIRICMNEDPGKRPTFDMVL 145
            PP    +  K    +IR+ ++ DP KRP    +L
Sbjct: 248 FPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLL 282

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359

 Score = 64.6 bits (157), Expect = 4e-13
 Identities = 26/96 (27%), Positives = 46/96 (47%), Gaps = 4/96 (4%)

Query: 57  WMSPEALQKKPGDRNLEACDMWSFAVLLWELATR-EVPFADLTPMEVGMKVALEGLRITI 115
           WM+PE +  +         D+WSF VLLWE+ +    P+  +   E   +   EG R+  
Sbjct: 261 WMAPETIFDRVYT---IQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRA 317

Query: 116 PPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKM 151
           P   +  + + +  C + +P +RPTF  ++  L  +
Sbjct: 318 PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 353

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413

 Score = 64.3 bits (156), Expect = 4e-13
 Identities = 11/88 (12%), Positives = 24/88 (27%), Gaps = 8/88 (9%)

Query: 55  PAWMSPEALQKKPGDRNL--EACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLR 112
           P   +   L        L   A D W+  + ++ +   ++P  D   +     +      
Sbjct: 276 PETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADLPNTDDAALGGSEWI------ 329

Query: 113 ITIPPGISSHLSKLIRICMNEDPGKRPT 140
                 I   +  L+   +      R  
Sbjct: 330 FRSCKNIPQPVRALLEGFLRYPKEDRLL 357

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318

 Score = 63.5 bits (155), Expect = 6e-13
 Identities = 27/110 (24%), Positives = 49/110 (44%), Gaps = 19/110 (17%)

Query: 57  WMSPEALQKKPGDRNLEACDMWSFAVLLWELAT---------------REVPFADLTPME 101
           W +PE L++    +   A D+WSF V L+EL T                 +    +T + 
Sbjct: 203 WYAPECLKEY---KFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLR 259

Query: 102 VGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKM 151
           +  ++   G R+  P    + +  L++ C   +   RPTF+ ++PIL  +
Sbjct: 260 L-TELLERGERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTV 308

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score = 63.6 bits (155), Expect = 7e-13
 Identities = 19/93 (20%), Positives = 37/93 (39%), Gaps = 2/93 (2%)

Query: 55  PAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATR-EVPFADLTPMEVGMKVALEGLRI 113
             W++PE L +   +      D++S   + + + +    PF      +  + +    L  
Sbjct: 190 EGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLGACSLDC 249

Query: 114 TIPPGISSHLSK-LIRICMNEDPGKRPTFDMVL 145
             P      +++ LI   +  DP KRP+   VL
Sbjct: 250 LHPEKHEDVIARELIEKMIAMDPQKRPSAKHVL 282

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score = 62.8 bits (153), Expect = 1e-12
 Identities = 21/149 (14%), Positives = 48/149 (32%), Gaps = 20/149 (13%)

Query: 18  KTSNAFL------------FCCQIDEDLTARINMADAQFSFQQRGRCYYPAWMSPEALQK 65
           K SN F                 +D+D   +  +       +  G+     +MSPE +  
Sbjct: 145 KPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHG 204

Query: 66  KPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSK 125
                     D++S  ++L+EL     PF+        +          +          
Sbjct: 205 NSYS---HKVDIFSLGLILFELLY---PFSTQMERVRTLTDVRNLKFPPLFTQKYPCEYV 258

Query: 126 LIRICMNEDPGKRPTFDMVL--PILDKMK 152
           +++  ++  P +RP    ++   + + + 
Sbjct: 259 MVQDMLSPSPMERPEAINIIENAVFEDLD 287

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327

 Score = 62.0 bits (151), Expect = 2e-12
 Identities = 28/109 (25%), Positives = 45/109 (41%), Gaps = 17/109 (15%)

Query: 57  WMSPEALQKKPGDRNLEACDMWSFAVLLWELATR-EVPFADLTPMEVGMKVAL------- 108
           W +PE+L            D+WSF V+L+EL T  +   +        M           
Sbjct: 196 WYAPESLSDN---IFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSR 252

Query: 109 ------EGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKM 151
                 EG R+  PP   + + +L+++C    P  RP+F  + P LD +
Sbjct: 253 LLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDML 301

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303

 Score = 61.2 bits (149), Expect = 4e-12
 Identities = 31/100 (31%), Positives = 44/100 (44%), Gaps = 22/100 (22%)

Query: 55  PAWMSPEALQKKPG-DRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRI 113
           P WM+PE +++  G D      D+WSF +   ELAT   P+    PM+V M         
Sbjct: 190 PCWMAPEVMEQVRGYD---FKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQND--- 243

Query: 114 TIPPGI-------------SSHLSKLIRICMNEDPGKRPT 140
             PP +                  K+I +C+ +DP KRPT
Sbjct: 244 --PPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPT 281

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297

 Score = 60.8 bits (148), Expect = 5e-12
 Identities = 28/119 (23%), Positives = 47/119 (39%), Gaps = 16/119 (13%)

Query: 23  FLFCCQIDEDLTARINMADAQFSFQQRGRCYYPAWMSPEALQKKPGDRNLEACDMWSFAV 82
           F FC QI  + + R  M               P WM+PE + +K         D+WS  +
Sbjct: 160 FGFCAQITPEQSKRSTMVGT------------PYWMAPEVVTRKAYG---PKVDIWSLGI 204

Query: 83  LLWELATREVPFADLTPMEVGMKVALEGL-RITIPPGISSHLSKLIRICMNEDPGKRPT 140
           +  E+   E P+ +  P+     +A  G   +  P  +S+     +  C+  D  KR +
Sbjct: 205 MAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGS 263

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321

 Score = 60.8 bits (148), Expect = 6e-12
 Identities = 25/119 (21%), Positives = 49/119 (41%), Gaps = 16/119 (13%)

Query: 23  FLFCCQIDEDLTARINMADAQFSFQQRGRCYYPAWMSPEALQKKPGDRNLEACDMWSFAV 82
           F FC QI +D+  R ++               P WM+PE + +          D+WS  +
Sbjct: 185 FGFCAQISKDVPKRKSLVGT------------PYWMAPEVISRSLYA---TEVDIWSLGI 229

Query: 83  LLWELATREVPFADLTPMEVGMKVALEGL-RITIPPGISSHLSKLIRICMNEDPGKRPT 140
           ++ E+   E P+   +P++   ++      ++     +S  L   +   +  DP +R T
Sbjct: 230 MVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKLKNSHKVSPVLRDFLERMLVRDPQERAT 288

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333

 Score = 60.7 bits (148), Expect = 8e-12
 Identities = 24/98 (24%), Positives = 46/98 (46%), Gaps = 8/98 (8%)

Query: 57  WMSPEALQKKPGDRNL-EACDMWSFAVLLWELATR-EVPF-ADLTPMEVGMKVALEGLRI 113
           WM+PE++     D       D+WS+ +LLWE+ +    P+   L   +   K+  +G ++
Sbjct: 232 WMAPESIF----DCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKF-YKLVKDGYQM 286

Query: 114 TIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKM 151
             P     ++  +++ C   +P  RPTF  +   L + 
Sbjct: 287 AQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQ 324

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314

 Score = 58.9 bits (143), Expect = 3e-11
 Identities = 22/87 (25%), Positives = 40/87 (45%), Gaps = 4/87 (4%)

Query: 55  PAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGL-RI 113
           P WM+PE +Q+   +      D+WS  +   E+A  + P+AD+ PM     +        
Sbjct: 189 PFWMAPEVIQEIGYN---CVADIWSLGITAIEMAEGKPPYADIHPMRAIFMIPTNPPPTF 245

Query: 114 TIPPGISSHLSKLIRICMNEDPGKRPT 140
             P   S + +  ++ C+ + P +R T
Sbjct: 246 RKPELWSDNFTDFVKQCLVKSPEQRAT 272

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377

 Score = 58.9 bits (142), Expect = 4e-11
 Identities = 10/94 (10%), Positives = 26/94 (27%), Gaps = 9/94 (9%)

Query: 55  PAWMSPEALQKKPGDRNL---EACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGL 111
           P   +  A      DR      + D W+  ++++ +   ++P      +     +     
Sbjct: 271 PELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWCADLPITKDAALGGSEWI----- 325

Query: 112 RITIPPGISSHLSKLIRICMNEDPGKRPTFDMVL 145
                  I   +  L+   +      R      +
Sbjct: 326 -FRSCKNIPQPVRALLEGFLRYPKEDRLLPLQAM 358

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337

 Score = 58.2 bits (141), Expect = 6e-11
 Identities = 24/103 (23%), Positives = 44/103 (42%), Gaps = 14/103 (13%)

Query: 55  PAWMSPE---ALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGL 111
           P + +PE        P     E  D+W+   +L+ L  R+ PF D   + +     + G 
Sbjct: 214 PMYRTPEIIDLYSNFPIG---EKQDIWALGCILYLLCFRQHPFEDGAKLRI-----VNG- 264

Query: 112 RITIPPG--ISSHLSKLIRICMNEDPGKRPTFDMVLPILDKMK 152
           + +IPP     +    LIR  +  +P +R +   V+  L ++ 
Sbjct: 265 KYSIPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIA 307

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371

 Score = 58.1 bits (140), Expect = 6e-11
 Identities = 15/98 (15%), Positives = 29/98 (29%), Gaps = 7/98 (7%)

Query: 55  PAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGM-------KVA 107
           P   +P             A + W   + ++ +    +PF  +TP   G           
Sbjct: 254 PVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLVTPGIKGSWKRPSLRVPG 313

Query: 108 LEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVL 145
            + L       +   +  LI   +N D  +R      +
Sbjct: 314 TDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAM 351

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326

 Score = 57.0 bits (138), Expect = 1e-10
 Identities = 22/93 (23%), Positives = 34/93 (36%), Gaps = 12/93 (12%)

Query: 55  PAWMSPEALQKKPGDRNL--EACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLR 112
           P WM+PE +              D+WS  +   E+A    P  D+ PM     +      
Sbjct: 193 PYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNP-- 250

Query: 113 ITIPPGI-SSHLSKL----IRICMNEDPGKRPT 140
               P + S   SK     I  C+ ++  +RP 
Sbjct: 251 ---APRLKSKKWSKKFQSFIESCLVKNHSQRPA 280

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434

 Score = 57.1 bits (138), Expect = 2e-10
 Identities = 23/121 (19%), Positives = 50/121 (41%), Gaps = 8/121 (6%)

Query: 33  LTARINMADAQFSFQQRGRCYYPAWMSPEALQKKPGDRNL----EACDMWSFAVLLWELA 88
           L  +++   + F            W +PE L++    +       + D++S   + + + 
Sbjct: 174 LCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYIL 233

Query: 89  TR-EVPFADLTPMEVGM---KVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMV 144
           ++ + PF D    E  +     +L+ ++      + +  + LI   ++ DP KRPT   V
Sbjct: 234 SKGKHPFGDKYSRESNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKV 293

Query: 145 L 145
           L
Sbjct: 294 L 294

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279

 Score = 56.1 bits (136), Expect = 3e-10
 Identities = 23/91 (25%), Positives = 40/91 (43%), Gaps = 5/91 (5%)

Query: 55  PAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRIT 114
             ++ PE ++ +  D   E  D+WS  VL +E    + PF   T  E   +++   +  T
Sbjct: 171 LDYLPPEMIEGRMHD---EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS--RVEFT 225

Query: 115 IPPGISSHLSKLIRICMNEDPGKRPTFDMVL 145
            P  ++     LI   +  +P +RP    VL
Sbjct: 226 FPDFVTEGARDLISRLLKHNPSQRPMLREVL 256

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332

 Score = 56.0 bits (135), Expect = 3e-10
 Identities = 18/103 (17%), Positives = 39/103 (37%), Gaps = 16/103 (15%)

Query: 55  PAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRI- 113
             +MSPE +            D++S  ++L+EL      F+  T ME      +  +R  
Sbjct: 240 KLYMSPEQIHGNNYS---HKVDIFSLGLILFELLY---SFS--TQME--RVRIITDVRNL 289

Query: 114 ---TIPPGISSHLSKLIRICMNEDPGKRPTFDMVL--PILDKM 151
               +          +++  ++  P +RP    ++   I + +
Sbjct: 290 KFPLLFTQKYPQEHMMVQDMLSPSPTERPEATDIIENAIFENL 332

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302

 Score = 56.2 bits (136), Expect = 3e-10
 Identities = 26/94 (27%), Positives = 43/94 (45%), Gaps = 13/94 (13%)

Query: 55  PAWMSPEALQKKPGDRNL--EACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLR 112
           P WM+PE +  +           D+WS  + L E+A  E P  +L PM V +K+A     
Sbjct: 181 PYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSD-- 238

Query: 113 ITIPPGI------SSHLSKLIRICMNEDPGKRPT 140
              PP +      S      ++I ++++P  RP+
Sbjct: 239 ---PPTLLTPSKWSVEFRDFLKIALDKNPETRPS 269

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348

 Score = 55.5 bits (134), Expect = 5e-10
 Identities = 26/94 (27%), Positives = 40/94 (42%), Gaps = 16/94 (17%)

Query: 55  PAWMSPE---ALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGL 111
           P WM+PE   A+ +   D      D+WS  +   ELA R+ P  ++  M     +A    
Sbjct: 214 PYWMAPEVILAMDEGQYD---GKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNE- 269

Query: 112 RITIPPGI-SSHLSKL----IRICMNEDPGKRPT 140
                P + S H S+     +  C+ + P  RPT
Sbjct: 270 ----SPALQSGHWSEYFRNFVDSCLQKIPQDRPT 299

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284

 Score = 53.4 bits (129), Expect = 2e-09
 Identities = 21/91 (23%), Positives = 36/91 (39%), Gaps = 5/91 (5%)

Query: 55  PAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRIT 114
             ++ PE ++ K  D   E  D+W   VL +E      PF   +  E   ++    + + 
Sbjct: 176 LDYLPPEMIEGKTHD---EKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIV--NVDLK 230

Query: 115 IPPGISSHLSKLIRICMNEDPGKRPTFDMVL 145
            PP +S     LI   +   P +R     V+
Sbjct: 231 FPPFLSDGSKDLISKLLRYHPPQRLPLKGVM 261

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score = 53.2 bits (128), Expect = 3e-09
 Identities = 29/98 (29%), Positives = 41/98 (41%), Gaps = 9/98 (9%)

Query: 50  GRCYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALE 109
           G  YY   ++PE L+KK      E CD+WS  V+L+ L     PF   T  E+  KV   
Sbjct: 200 GTAYY---IAPEVLRKKYD----EKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKG 252

Query: 110 GLRITIPP--GISSHLSKLIRICMNEDPGKRPTFDMVL 145
                 P    +S     LI+  +  D  +R +    L
Sbjct: 253 KYTFDSPEWKNVSEGAKDLIKQMLQFDSQRRISAQQAL 290

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345

 Score = 52.9 bits (127), Expect = 4e-09
 Identities = 24/115 (20%), Positives = 40/115 (34%), Gaps = 3/115 (2%)

Query: 33  LTARINMADAQFSFQQRGRCYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREV 92
           L+      +    +    +   P +++PE L           CD WS  VLL  L    V
Sbjct: 216 LSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYG-PKCDAWSAGVLLHLLLMGAV 274

Query: 93  PFADLTPMEVGMKVALEGLRITIPP--GISSHLSKLIRICMNEDPGKRPTFDMVL 145
           PF  +   +   +V  + L    P    +S     L+   +N +  +R      L
Sbjct: 275 PFPGVNDADTISQVLNKKLCFENPNYNVLSPLARDLLSNLLNRNVDERFDAMRAL 329

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389

 Score = 52.6 bits (126), Expect = 5e-09
 Identities = 22/162 (13%), Positives = 40/162 (24%), Gaps = 50/162 (30%)

Query: 23  FLFCCQIDEDLTARINMADAQFSFQQRGRCYYPAWMSPEALQKKPGDRNLEACDMWSFAV 82
                 +      +  + D      +        W+SPE LQ+     +    D++S  +
Sbjct: 172 LRSNLSMISHGQRQRVVHDFPKYSVKV-----LPWLSPEVLQQNLQGYD-AKSDIYSVGI 225

Query: 83  LLWELATREVPFADLTPMEV---------------------------------------- 102
              ELA   VPF D+   ++                                        
Sbjct: 226 TACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTSTIPAEELTMSPSRSVANSGLSDSL 285

Query: 103 ----GMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPT 140
                     +          S H    +  C+  +P  RP+
Sbjct: 286 TTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPS 327

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... Length = 350

 Score = 52.3 bits (126), Expect = 7e-09
 Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 5/87 (5%)

Query: 52  CYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGL 111
           C  P  ++PE +  K  ++   A D W+  VL++E+A    PF    P+++  K+ + G 
Sbjct: 199 CGTPEALAPEIILSKGYNK---AVDWWALGVLIYEMAAGYPPFFADQPIQIYEKI-VSG- 253

Query: 112 RITIPPGISSHLSKLIRICMNEDPGKR 138
           ++  P   SS L  L+R  +  D  KR
Sbjct: 254 KVRFPSHFSSDLKDLLRNLLQVDLTKR 280

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score = 52.0 bits (125), Expect = 9e-09
 Identities = 26/98 (26%), Positives = 38/98 (38%), Gaps = 9/98 (9%)

Query: 50  GRCYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALE 109
           G  YY   ++PE L         E CD+WS  V+L+ L +   PF      ++  KV   
Sbjct: 190 GTAYY---IAPEVLHGTYD----EKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKG 242

Query: 110 GLRITIPP--GISSHLSKLIRICMNEDPGKRPTFDMVL 145
                +P    +S     LIR  +   P  R +    L
Sbjct: 243 KYTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDAL 280

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327

 Score = 51.2 bits (123), Expect = 2e-08
 Identities = 21/96 (21%), Positives = 40/96 (41%), Gaps = 5/96 (5%)

Query: 55  PAWMSPEALQKKPGDRNLEA-CDMWSFAVLLWELATREVPFADLTPM-EVGMKVALE--- 109
             +M+PE +      +  +   D+WS  + L+ELAT   P+     + +   +V      
Sbjct: 189 RPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKGDPP 248

Query: 110 GLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVL 145
            L  +     S      + +C+ +D  KRP +  +L
Sbjct: 249 QLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELL 284

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486

 Score = 51.2 bits (123), Expect = 2e-08
 Identities = 26/95 (27%), Positives = 38/95 (40%), Gaps = 9/95 (9%)

Query: 53  YYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLR 112
           YY   ++PE L+        E CD+WS  V+L+ L +   PF      ++  +V      
Sbjct: 188 YY---IAPEVLRGTYD----EKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYA 240

Query: 113 ITIPP--GISSHLSKLIRICMNEDPGKRPTFDMVL 145
             +P    IS     LIR  +   P  R T    L
Sbjct: 241 FDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCL 275

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318

 Score = 50.8 bits (122), Expect = 2e-08
 Identities = 27/95 (28%), Positives = 43/95 (45%), Gaps = 4/95 (4%)

Query: 55  PAWMSPEALQ--KKPGDRNLEACDMWSFAVLLWELATREVPFADL-TPMEVGMKVALEGL 111
            A+M+PE +              D+WS  + L ELAT + P+ +  T  EV  KV  E  
Sbjct: 188 AAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEP 247

Query: 112 -RITIPPGISSHLSKLIRICMNEDPGKRPTFDMVL 145
             +    G S      ++ C+ +D  KRP ++ +L
Sbjct: 248 PLLPGHMGFSGDFQSFVKDCLTKDHRKRPKYNKLL 282

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328

 Score = 50.4 bits (121), Expect = 3e-08
 Identities = 26/91 (28%), Positives = 45/91 (49%), Gaps = 4/91 (4%)

Query: 55  PAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRIT 114
           P + +PE  Q K  D      D+WS  V+L+ L +  +PF      E+  +V L G +  
Sbjct: 177 PPYAAPELFQGKKYDG--PEVDVWSLGVILYTLVSGSLPFDGQNLKELRERV-LRG-KYR 232

Query: 115 IPPGISSHLSKLIRICMNEDPGKRPTFDMVL 145
           IP  +S+    L++  +  +P KR T + ++
Sbjct: 233 IPFYMSTDCENLLKRFLVLNPIKRGTLEQIM 263

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290

 Score = 49.9 bits (120), Expect = 3e-08
 Identities = 20/94 (21%), Positives = 41/94 (43%), Gaps = 4/94 (4%)

Query: 55  PAWMSPEALQKKPGDRNL-EACDMWSFAVLLWELATREVPFADL-TPMEVGMKVALEGLR 112
             +M+PE +  +   +      D+WS  + + ELA    P+    TP +   +V +E   
Sbjct: 173 KPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQV-VEEPS 231

Query: 113 ITIPPGI-SSHLSKLIRICMNEDPGKRPTFDMVL 145
             +P    S+        C+ ++  +RPT+  ++
Sbjct: 232 PQLPADKFSAEFVDFTSQCLKKNSKERPTYPELM 265

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504

 Score = 49.7 bits (119), Expect = 5e-08
 Identities = 27/95 (28%), Positives = 41/95 (43%), Gaps = 9/95 (9%)

Query: 53  YYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLR 112
           YY   ++PE L+KK      E CD+WS  V+++ L     PF      ++  KV      
Sbjct: 213 YY---IAPEVLKKKYN----EKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYY 265

Query: 113 ITIPP--GISSHLSKLIRICMNEDPGKRPTFDMVL 145
                   IS    +LI++ +  D  KR T +  L
Sbjct: 266 FDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEAL 300

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396

 Score = 49.1 bits (117), Expect = 8e-08
 Identities = 18/131 (13%), Positives = 39/131 (29%), Gaps = 32/131 (24%)

Query: 55  PAWMSPEALQKKPGDRNL-----EACDMWSFAVLLWELATREVPFADLTPMEVGMKV--- 106
             ++ P+  ++    ++         D+WS  V  +  AT  +PF          +V   
Sbjct: 179 EEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYK 238

Query: 107 --------ALEGLRIT----------------IPPGISSHLSKLIRICMNEDPGKRPTFD 142
                   A+ G++                  +  G+   L+ ++   +  D  K   FD
Sbjct: 239 IITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFD 298

Query: 143 MVLPILDKMKR 153
                   +  
Sbjct: 299 QFFAETSDILH 309

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335

 Score = 48.8 bits (117), Expect = 1e-07
 Identities = 24/91 (26%), Positives = 42/91 (46%), Gaps = 5/91 (5%)

Query: 55  PAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRIT 114
           P +++PE L KK         D+WS   +++ L   + PF      E  +++       +
Sbjct: 205 PNYIAPEVLSKKGHS---FEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIK--KNEYS 259

Query: 115 IPPGISSHLSKLIRICMNEDPGKRPTFDMVL 145
           IP  I+   + LI+  +  DP  RPT + +L
Sbjct: 260 IPKHINPVAASLIQKMLQTDPTARPTINELL 290

>1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB, inhibitor, LY333531, diabetes, cancer, transferase, serine/threonine-protein kinase; HET: SEP LY4; 1.7A {Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A* 1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ... Length = 310

 Score = 48.4 bits (116), Expect = 1e-07
 Identities = 16/84 (19%), Positives = 33/84 (39%), Gaps = 5/84 (5%)

Query: 55  PAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRIT 114
             ++SPE L +K   +   + D+W+   ++++L     PF       +  K+ ++     
Sbjct: 196 AQYVSPELLTEKSACK---SSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKI-IKL-EYD 250

Query: 115 IPPGISSHLSKLIRICMNEDPGKR 138
            P         L+   +  D  KR
Sbjct: 251 FPEKFFPKARDLVEKLLVLDATKR 274

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319

 Score = 48.2 bits (115), Expect = 2e-07
 Identities = 18/123 (14%), Positives = 38/123 (30%), Gaps = 32/123 (26%)

Query: 55  PAWMSPEALQKKPGDRNL-----EACDMWSFAVLLWELATREVPFADLTPME-------- 101
             ++ P+  ++    ++         D+WS  V  +  AT  +PF               
Sbjct: 179 EEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYK 238

Query: 102 ----------VGMKVALEG---------LRITIPPGISSHLSKLIRICMNEDPGKRPTFD 142
                      G++ A  G         +  ++  G+   L+ ++   +  D  K   FD
Sbjct: 239 IITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFD 298

Query: 143 MVL 145
              
Sbjct: 299 QFF 301

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294

 Score = 48.0 bits (115), Expect = 2e-07
 Identities = 24/91 (26%), Positives = 42/91 (46%), Gaps = 5/91 (5%)

Query: 55  PAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRIT 114
           P +++PE L KK         D+WS   +++ L   + PF      E  +++       +
Sbjct: 179 PNYIAPEVLSKKGHS---FEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIK--KNEYS 233

Query: 115 IPPGISSHLSKLIRICMNEDPGKRPTFDMVL 145
           IP  I+   + LI+  +  DP  RPT + +L
Sbjct: 234 IPKHINPVAASLIQKMLQTDPTARPTINELL 264

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320

 Score = 48.1 bits (115), Expect = 2e-07
 Identities = 21/93 (22%), Positives = 41/93 (44%), Gaps = 14/93 (15%)

Query: 55  PAWMSPEALQKKP--GDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLR 112
             +  PE ++     G     +  +WS  +LL+++   ++PF          ++ + G +
Sbjct: 212 RVYSPPEWIRYHRYHG----RSAAVWSLGILLYDMVCGDIPFEHDE------EI-IRG-Q 259

Query: 113 ITIPPGISSHLSKLIRICMNEDPGKRPTFDMVL 145
           +     +SS    LIR C+   P  RPTF+ + 
Sbjct: 260 VFFRQRVSSECQHLIRWCLALRPSDRPTFEEIQ 292

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} Length = 335

 Score = 48.2 bits (115), Expect = 2e-07
 Identities = 32/125 (25%), Positives = 52/125 (41%), Gaps = 22/125 (17%)

Query: 29  IDEDLTARINMADAQFS-FQQRGR-----CYYPAWMSPEALQKKP--GDRNLEACDMWSF 80
           I ED T ++   D   + + +RG+     C    + +PE L   P  G       +MWS 
Sbjct: 163 IAEDFTIKL--IDFGSAAYLERGKLFYTFCGTIEYCAPEVLMGNPYRG----PELEMWSL 216

Query: 81  AVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPT 140
            V L+ L   E PF +L       +  +E   I  P  +S  L  L+   +   P +R T
Sbjct: 217 GVTLYTLVFEENPFCEL-------EETVEA-AIHPPYLVSKELMSLVSGLLQPVPERRTT 268

Query: 141 FDMVL 145
            + ++
Sbjct: 269 LEKLV 273

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419

 Score = 47.8 bits (114), Expect = 2e-07
 Identities = 22/100 (22%), Positives = 37/100 (37%), Gaps = 3/100 (3%)

Query: 49  RGRCYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPF-ADLTPMEVGMKVA 107
           R  C  P +++PE L          A D WS  V+L+   +   PF    T + +  ++ 
Sbjct: 299 RTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQIT 358

Query: 108 LEGLRITIPP--GISSHLSKLIRICMNEDPGKRPTFDMVL 145
                        +S     L++  +  DP  R T +  L
Sbjct: 359 SGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEAL 398

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384

 Score = 47.3 bits (113), Expect = 3e-07
 Identities = 19/86 (22%), Positives = 33/86 (38%), Gaps = 3/86 (3%)

Query: 55  PAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPF--ADLTPMEVGMKVALEGLR 112
             +M+PE    + G     A D WS  V  +EL     P+     T  +  +        
Sbjct: 178 KPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETT-V 236

Query: 113 ITIPPGISSHLSKLIRICMNEDPGKR 138
           +T P   S  +  L++  +  +P +R
Sbjct: 237 VTYPSAWSQEMVSLLKKLLEPNPDQR 262

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} Length = 298

 Score = 47.3 bits (113), Expect = 3e-07
 Identities = 24/91 (26%), Positives = 43/91 (47%)

Query: 55  PAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRIT 114
           PA+M+PE+L +     + +A D+W+  V L+     + PF D   M +  K+  + L   
Sbjct: 201 PAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMCLHSKIKSQALEFP 260

Query: 115 IPPGISSHLSKLIRICMNEDPGKRPTFDMVL 145
             P I+  L  LI   ++++P  R     + 
Sbjct: 261 DQPDIAEDLKDLITRMLDKNPESRIVVPEIK 291

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278

 Score = 46.8 bits (112), Expect = 4e-07
 Identities = 21/91 (23%), Positives = 32/91 (35%), Gaps = 5/91 (5%)

Query: 55  PAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRIT 114
           P ++SPE   +          D+WS   + + L     PF   T      KV        
Sbjct: 176 PNYISPEIATRSAHG---LESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVV--LADYE 230

Query: 115 IPPGISSHLSKLIRICMNEDPGKRPTFDMVL 145
           +P  +S     LI   +  +P  R +   VL
Sbjct: 231 MPSFLSIEAKDLIHQLLRRNPADRLSLSSVL 261

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312

 Score = 46.9 bits (112), Expect = 5e-07
 Identities = 20/93 (21%), Positives = 37/93 (39%), Gaps = 14/93 (15%)

Query: 55  PAWMSPEALQKKP--GDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLR 112
             +  PE + +             +WS  +LL+++   ++PF          +  LE   
Sbjct: 202 RVYSPPEWISRHQYHA----LPATVWSLGILLYDMVCGDIPFER-------DQEILEA-E 249

Query: 113 ITIPPGISSHLSKLIRICMNEDPGKRPTFDMVL 145
           +  P  +S     LIR C+   P  RP+ + +L
Sbjct: 250 LHFPAHVSPDCCALIRRCLAPKPSSRPSLEEIL 282

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 Length = 318

 Score = 46.8 bits (112), Expect = 5e-07
 Identities = 22/84 (26%), Positives = 41/84 (48%), Gaps = 5/84 (5%)

Query: 55  PAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRIT 114
           P +++PE +  KP ++   + D WSF +L++E+     PF D   M+   K+ L    + 
Sbjct: 167 PDYIAPEVVSTKPYNK---SIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKI-LNA-ELR 221

Query: 115 IPPGISSHLSKLIRICMNEDPGKR 138
            PP  +  +  L+   +  D  +R
Sbjct: 222 FPPFFNEDVKDLLSRLITRDLSQR 245

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294

 Score = 46.5 bits (111), Expect = 6e-07
 Identities = 20/88 (22%), Positives = 38/88 (43%), Gaps = 6/88 (6%)

Query: 55  PAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMK---VALEGL 111
             + SPE  + +  D   E  D++S  ++L+E+   E PF   T + + +K    ++  +
Sbjct: 176 VQYFSPEQAKGEATD---ECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQDSVPNV 232

Query: 112 RITIPPGISSHLSKLIRICMNEDPGKRP 139
              +   I   LS +I     +D   R 
Sbjct: 233 TTDVRKDIPQSLSNVILRATEKDKANRY 260

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336

 Score = 46.6 bits (111), Expect = 6e-07
 Identities = 29/101 (28%), Positives = 47/101 (46%), Gaps = 9/101 (8%)

Query: 51  RCYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEV--GMKVAL 108
            CY P +++PE L  +  D   ++CDMWS  V+++ L     PF   T   +  GMK  +
Sbjct: 189 PCYTPYYVAPEVLGPEKYD---KSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRI 245

Query: 109 EGLRITIP----PGISSHLSKLIRICMNEDPGKRPTFDMVL 145
              +   P      +S    +LIR+ +  DP +R T    +
Sbjct: 246 RLGQYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFM 286

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342

 Score = 46.1 bits (110), Expect = 9e-07
 Identities = 26/99 (26%), Positives = 47/99 (47%), Gaps = 8/99 (8%)

Query: 52  CYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPM-EVGMKVALEG 110
           CY   +++PE L+++  D    ACD+WS  VLL+ + T   PFA+        +   +  
Sbjct: 181 CYTANFVAPEVLERQGYD---AACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGS 237

Query: 111 LRITIP----PGISSHLSKLIRICMNEDPGKRPTFDMVL 145
            + ++       +S     L+   ++ DP +R T  +VL
Sbjct: 238 GKFSLSGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVL 276

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325

 Score = 46.1 bits (110), Expect = 9e-07
 Identities = 23/107 (21%), Positives = 41/107 (38%), Gaps = 14/107 (13%)

Query: 49  RGRCYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVA- 107
           +  C+   + +PE L +   D   E+CD+WS  V+L+ + + +VPF              
Sbjct: 167 KTPCFTLHYAAPELLNQNGYD---ESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVE 223

Query: 108 -----LEGLRITIP----PGISSHLSKLIRICMNEDPGKRPTFDMVL 145
                 +G   +        +S     LI+  +  DP KR     + 
Sbjct: 224 IMKKIKKG-DFSFEGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLR 269

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A Length = 286

 Score = 45.9 bits (109), Expect = 1e-06
 Identities = 11/72 (15%), Positives = 18/72 (25%), Gaps = 7/72 (9%)

Query: 74  ACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIP------PGISSHLSKLI 127
             D+      L+ L     P  +      G+  A                 I   +S + 
Sbjct: 182 QDDIRGIGASLYALLVNRWPLPEAGV-RSGLAPAERDTAGQPIEPADIDRDIPFQISAVA 240

Query: 128 RICMNEDPGKRP 139
              +  D G R 
Sbjct: 241 ARSVQGDGGIRS 252

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* Length = 410

 Score = 45.1 bits (107), Expect = 2e-06
 Identities = 25/87 (28%), Positives = 37/87 (42%), Gaps = 4/87 (4%)

Query: 55  PAWMSPEALQKKPGDRNL-EACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRI 113
           P ++SPE L+ + GD      CD WS  V L+E+   + PF   + +    K+      +
Sbjct: 233 PDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSL 292

Query: 114 TIP--PGISSHLSKLIRICMNEDPGKR 138
           T P    IS     LI   +  D   R
Sbjct: 293 TFPDDNDISKEAKNLICAFLT-DREVR 318

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* Length = 437

 Score = 45.1 bits (107), Expect = 2e-06
 Identities = 25/89 (28%), Positives = 37/89 (41%), Gaps = 6/89 (6%)

Query: 55  PAWMSPEALQKKPGDRNL--EACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLR 112
           P ++SPE LQ   G +      CD WS  V ++E+   E PF   + +E   K+     R
Sbjct: 240 PDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKER 299

Query: 113 ITIP---PGISSHLSKLIRICMNEDPGKR 138
              P     +S +   LIR  +      R
Sbjct: 300 FQFPTQVTDVSENAKDLIRRLICSRE-HR 327

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400

 Score = 44.7 bits (106), Expect = 3e-06
 Identities = 27/103 (26%), Positives = 45/103 (43%), Gaps = 9/103 (8%)

Query: 49  RGRCYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFAD--LTPMEVGMKV 106
              CY P +++PE L  +  D   ++CDMWS  V+++ L     PF       +  GMK 
Sbjct: 221 TTPCYTPYYVAPEVLGPEKYD---KSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKT 277

Query: 107 ALEGLRITIP----PGISSHLSKLIRICMNEDPGKRPTFDMVL 145
            +   +   P      +S  +  LIR  +  +P +R T    +
Sbjct: 278 RIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFM 320

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681

 Score = 44.8 bits (106), Expect = 3e-06
 Identities = 12/85 (14%), Positives = 25/85 (29%), Gaps = 12/85 (14%)

Query: 55  PAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRIT 114
           P + +PE ++  P        D+++    L  L              +            
Sbjct: 241 PGFQAPEIVRTGPTVA----TDIYTVGRTLAALTLDLPTRNGRYVDGLPEDDP------- 289

Query: 115 IPPGISSHLSKLIRICMNEDPGKRP 139
                     +L+R  ++ DP +R 
Sbjct: 290 -VLKTYDSYGRLLRRAIDPDPRQRF 313

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676

 Score = 44.7 bits (105), Expect = 3e-06
 Identities = 18/110 (16%), Positives = 31/110 (28%), Gaps = 25/110 (22%)

Query: 55  PAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRIT 114
             +++PE L++K         D WSF  L +E  T   PF              E     
Sbjct: 187 LQYLAPELLEQKKYT---VTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEH 243

Query: 115 IP----------------------PGISSHLSKLIRICMNEDPGKRPTFD 142
           I                         ++  L + ++  +     +R T  
Sbjct: 244 IVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDP 293

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* Length = 373

 Score = 43.0 bits (102), Expect = 9e-06
 Identities = 22/84 (26%), Positives = 37/84 (44%), Gaps = 5/84 (5%)

Query: 55  PAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRIT 114
           P +++PE L K+P DR     D W    +L+E+     PF      E+     L    + 
Sbjct: 203 PEYLAPEVLHKQPYDR---TVDWWCLGAVLYEMLYGLPPFYSRNTAEM-YDNILNK-PLQ 257

Query: 115 IPPGISSHLSKLIRICMNEDPGKR 138
           + P I++    L+   + +D  KR
Sbjct: 258 LKPNITNSARHLLEGLLQKDRTKR 281

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* Length = 446

 Score = 43.2 bits (102), Expect = 9e-06
 Identities = 20/87 (22%), Positives = 40/87 (45%), Gaps = 5/87 (5%)

Query: 52  CYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGL 111
           C  P +++PE L+     R   A D W   V+++E+    +PF +    ++   + +E +
Sbjct: 310 CGTPEYLAPEVLEDNDYGR---AVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEI 366

Query: 112 RITIPPGISSHLSKLIRICMNEDPGKR 138
           R   P  +      L+   + +DP +R
Sbjct: 367 R--FPRTLGPEAKSLLSGLLKKDPKQR 391

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* Length = 345

 Score = 43.0 bits (102), Expect = 9e-06
 Identities = 20/84 (23%), Positives = 33/84 (39%), Gaps = 5/84 (5%)

Query: 55  PAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRIT 114
           P +++PE L  +  +    + D WSF VLL+E+   + PF      E+            
Sbjct: 182 PDYIAPEILLGQKYNH---SVDWWSFGVLLYEMLIGQSPFHGQDEEEL-FHSIRMD-NPF 236

Query: 115 IPPGISSHLSKLIRICMNEDPGKR 138
            P  +      L+      +P KR
Sbjct: 237 YPRWLEKEAKDLLVKLFVREPEKR 260

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311

 Score = 43.0 bits (102), Expect = 1e-05
 Identities = 21/91 (23%), Positives = 40/91 (43%), Gaps = 13/91 (14%)

Query: 55  PAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRIT 114
             ++SPE  +    D      D++S   +L+E+ T E PF   +P+     VA + +R  
Sbjct: 183 AQYLSPEQARGDSVD---ARSDVYSLGCVLYEVLTGEPPFTGDSPVS----VAYQHVRED 235

Query: 115 IP------PGISSHLSKLIRICMNEDPGKRP 139
                    G+S+ L  ++   + ++P  R 
Sbjct: 236 PIPPSARHEGLSADLDAVVLKALAKNPENRY 266

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298

 Score = 42.6 bits (101), Expect = 1e-05
 Identities = 23/104 (22%), Positives = 41/104 (39%), Gaps = 9/104 (8%)

Query: 49  RGRCYYPAWMSPEALQKKPGDRNL---EACDMWSFAVLLWELATREVPFADLTPMEVGMK 105
           R  C  P++++PE ++    D +    +  DMWS  V+++ L     PF     M +   
Sbjct: 181 REVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRM 240

Query: 106 VALEGLRITIP----PGISSHLSKLIRICMNEDPGKRPTFDMVL 145
           + + G             S  +  L+   +   P KR T +  L
Sbjct: 241 I-MSG-NYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEAL 282

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322

 Score = 42.7 bits (101), Expect = 1e-05
 Identities = 21/96 (21%), Positives = 37/96 (38%), Gaps = 7/96 (7%)

Query: 55  PAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPF-ADLTPMEVGMKVALEGLRI 113
           P +++PE L          A D WS  V+L+   +   PF    T + +  ++   G + 
Sbjct: 180 PTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQI-TSG-KY 237

Query: 114 TIP----PGISSHLSKLIRICMNEDPGKRPTFDMVL 145
                    +S     L++  +  DP  R T +  L
Sbjct: 238 NFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEAL 273

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309

 Score = 42.6 bits (101), Expect = 1e-05
 Identities = 18/91 (19%), Positives = 32/91 (35%), Gaps = 14/91 (15%)

Query: 55  PAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRIT 114
             +M+PE   +          D+++   +L+E  T   P+         + V    +   
Sbjct: 199 LYYMAPERFSESHAT---YRADIYALTCVLYECLTGSPPYQGDQ-----LSVMGAHINQA 250

Query: 115 IP------PGISSHLSKLIRICMNEDPGKRP 139
           IP      PGI      +I   M ++P  R 
Sbjct: 251 IPRPSTVRPGIPVAFDAVIARGMAKNPEDRY 281

>3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695

 Score = 42.6 bits (100), Expect = 2e-05
 Identities = 22/120 (18%), Positives = 36/120 (30%), Gaps = 23/120 (19%)

Query: 23  FLFCCQIDEDLTARINMADAQFSFQQRGRCYYPAWMSPEALQKKPG-DRNLEACDMWSFA 81
               C   +                         +M+PE LQK    D    + D +S  
Sbjct: 336 LGLACDFSKKKP--------------HASVGTHGYMAPEVLQKGVAYDS---SADWFSLG 378

Query: 82  VLLWELATREVPFADLTPM---EVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKR 138
            +L++L     PF         E+     L    + +P   S  L  L+   +  D  +R
Sbjct: 379 CMLFKLLRGHSPFRQHKTKDKHEIDRMT-LTM-AVELPDSFSPELRSLLEGLLQRDVNRR 436

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* Length = 276

 Score = 42.2 bits (100), Expect = 2e-05
 Identities = 24/94 (25%), Positives = 41/94 (43%), Gaps = 4/94 (4%)

Query: 52  CYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGL 111
           C  P + +PE +  +      E  D+WS  V+L+ L    +PF D     +  K+   G 
Sbjct: 171 CGSPNYAAPEVISGRLYA-GPEV-DIWSCGVILYALLCGTLPFDDEHVPTLFKKI-RGG- 226

Query: 112 RITIPPGISSHLSKLIRICMNEDPGKRPTFDMVL 145
              IP  ++  ++ L+   +  DP KR T   + 
Sbjct: 227 VFYIPEYLNRSVATLLMHMLQVDPLKRATIKDIR 260

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} Length = 412

 Score = 42.4 bits (100), Expect = 2e-05
 Identities = 21/91 (23%), Positives = 35/91 (38%), Gaps = 8/91 (8%)

Query: 55  PAWMSPEALQKKPGDRNLE----ACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEG 110
           P ++SPE LQ   G          CD W+  V  +E+   + PF   +  E   K+    
Sbjct: 227 PDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYK 286

Query: 111 LRITIP---PGISSHLSKLIRICMNEDPGKR 138
             +++P    G+       I+  +   P  R
Sbjct: 287 EHLSLPLVDEGVPEEARDFIQRLLC-PPETR 316

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287

 Score = 42.2 bits (100), Expect = 2e-05
 Identities = 26/97 (26%), Positives = 38/97 (39%), Gaps = 13/97 (13%)

Query: 53  YYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLR 112
           YY   ++PE L+        E CD+WS  V+L+ L +   PF      ++  +V   G +
Sbjct: 188 YY---IAPEVLRGTYD----EKCDVWSAGVILYILLSGTPPFYGKNEYDILKRV-ETG-K 238

Query: 113 ITIP----PGISSHLSKLIRICMNEDPGKRPTFDMVL 145
                     IS     LIR  +   P  R T    L
Sbjct: 239 YAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCL 275

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277

 Score = 42.2 bits (100), Expect = 2e-05
 Identities = 30/97 (30%), Positives = 43/97 (44%), Gaps = 13/97 (13%)

Query: 53  YYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLR 112
           YY   +SP+ L+   G      CD WS  V+++ L     PF+  T  EV +K+  EG  
Sbjct: 173 YY---VSPQVLEGLYG----PECDEWSAGVMMYVLLCGYPPFSAPTDSEVMLKI-REG-T 223

Query: 113 ITIP----PGISSHLSKLIRICMNEDPGKRPTFDMVL 145
            T P      +S     LIR  + + P +R T    L
Sbjct: 224 FTFPEKDWLNVSPQAESLIRRLLTKSPKQRITSLQAL 260

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348

 Score = 42.4 bits (100), Expect = 2e-05
 Identities = 16/109 (14%), Positives = 36/109 (33%), Gaps = 19/109 (17%)

Query: 55  PAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPF-ADLTPME------------ 101
             +M PE    +         D+WS  + L+ +    VPF   ++ +E            
Sbjct: 214 YEFMPPEFFSNESSYNG-AKVDIWSLGICLYVMFYNVVPFSLKISLVELFNNIRTKNIEY 272

Query: 102 -----VGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVL 145
                  +              +S+     +++ + ++P +R T +  L
Sbjct: 273 PLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDAL 321

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* Length = 327

 Score = 42.1 bits (100), Expect = 2e-05
 Identities = 18/84 (21%), Positives = 38/84 (45%), Gaps = 5/84 (5%)

Query: 55  PAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRIT 114
             +M+PE L +   +R   A D WS   L++++ T   PF      +  +   L+  ++ 
Sbjct: 185 IEYMAPEILMRSGHNR---AVDWWSLGALMYDMLTGAPPFTGENRKKT-IDKILKC-KLN 239

Query: 115 IPPGISSHLSKLIRICMNEDPGKR 138
           +PP ++     L++  +  +   R
Sbjct: 240 LPPYLTQEARDLLKKLLKRNAASR 263

>3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of P90 ribosomal S6 kinase 2, ATP- binding, nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A* Length = 325

 Score = 42.2 bits (100), Expect = 2e-05
 Identities = 22/84 (26%), Positives = 42/84 (50%), Gaps = 5/84 (5%)

Query: 55  PAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRIT 114
             +M+PE + ++   +   + D WSF VL++E+ T  +PF      E  M + L+  ++ 
Sbjct: 190 VEYMAPEVVNRRGHTQ---SADWWSFGVLMFEMLTGTLPFQGKDRKET-MTMILKA-KLG 244

Query: 115 IPPGISSHLSKLIRICMNEDPGKR 138
           +P  +S     L+R+    +P  R
Sbjct: 245 MPQFLSPEAQSLLRMLFKRNPANR 268

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284

 Score = 42.2 bits (100), Expect = 2e-05
 Identities = 26/101 (25%), Positives = 41/101 (40%), Gaps = 9/101 (8%)

Query: 49  RGRCYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVAL 108
            G    P ++SPE L+K P     +  D+W+  V+L+ L     PF D     +  ++  
Sbjct: 165 HGFAGTPGYLSPEVLKKDPYS---KPVDIWACGVILYILLVGYPPFWDEDQHRLYAQI-K 220

Query: 109 EGLRITIP----PGISSHLSKLIRICMNEDPGKRPTFDMVL 145
            G     P      ++     LI   +  +P KR T D  L
Sbjct: 221 AG-AYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQAL 260

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285

 Score = 42.2 bits (100), Expect = 2e-05
 Identities = 23/96 (23%), Positives = 41/96 (42%), Gaps = 12/96 (12%)

Query: 53  YYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLR 112
            Y   M+PE  ++         CD+WS  V+++ L T  +PF   +  EV  + A     
Sbjct: 191 LY---MAPEVFKRDVT----FKCDIWSAGVVMYFLLTGCLPFTGTSLEEV-QQKATYK-E 241

Query: 113 ITIPP---GISSHLSKLIRICMNEDPGKRPTFDMVL 145
                    ++     L++  + +DP +RP+   VL
Sbjct: 242 PNYAVECRPLTPQAVDLLKQMLTKDPERRPSAAQVL 277

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A Length = 674

 Score = 41.9 bits (98), Expect = 3e-05
 Identities = 22/84 (26%), Positives = 41/84 (48%), Gaps = 5/84 (5%)

Query: 55  PAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRIT 114
           P +++PE +  +P  +   + D W+F VLL+E+   + PF      E+  +  +E   + 
Sbjct: 506 PDYIAPEIIAYQPYGK---SVDWWAFGVLLYEMLAGQAPFEGEDEDEL-FQSIMEH-NVA 560

Query: 115 IPPGISSHLSKLIRICMNEDPGKR 138
            P  +S     + +  M + PGKR
Sbjct: 561 YPKSMSKEAVAICKGLMTKHPGKR 584

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543

 Score = 41.7 bits (98), Expect = 3e-05
 Identities = 21/94 (22%), Positives = 37/94 (39%), Gaps = 9/94 (9%)

Query: 49  RGRCYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPF----ADLTPMEVGM 104
           +G    P +M+PE L  +  D    + D ++  V L+E+     PF      +   E+  
Sbjct: 347 KGYAGTPGFMAPELLLGEEYDF---SVDYFALGVTLYEMIAARGPFRARGEKVENKELKQ 403

Query: 105 KVALEGLRITIPPGISSHLSKLIRICMNEDPGKR 138
           +V  + +    P   S          + +DP KR
Sbjct: 404 RVLEQAVT--YPDKFSPASKDFCEALLQKDPEKR 435

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... Length = 337

 Score = 41.4 bits (98), Expect = 3e-05
 Identities = 20/84 (23%), Positives = 38/84 (45%), Gaps = 5/84 (5%)

Query: 55  PAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRIT 114
           P +++PE L+     R   A D W   V+++E+    +PF +     +  ++ L    I 
Sbjct: 169 PEYLAPEVLEDNDYGR---AVDWWGLGVVMYEMMCGRLPFYNQDHERL-FELILME-EIR 223

Query: 115 IPPGISSHLSKLIRICMNEDPGKR 138
            P  +S     L+   + +DP +R
Sbjct: 224 FPRTLSPEAKSLLAGLLKKDPKQR 247

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} Length = 353

 Score = 41.1 bits (97), Expect = 4e-05
 Identities = 19/84 (22%), Positives = 37/84 (44%), Gaps = 5/84 (5%)

Query: 55  PAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRIT 114
           P +++PE LQ+        A D W+  VLL+E+     PF      ++  +  L    + 
Sbjct: 188 PDYIAPEILQEMLYGP---AVDWWAMGVLLYEMLCGHAPFEAENEDDL-FEAILND-EVV 242

Query: 115 IPPGISSHLSKLIRICMNEDPGKR 138
            P  +    + +++  M ++P  R
Sbjct: 243 YPTWLHEDATGILKSFMTKNPTMR 266

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576

 Score = 41.3 bits (97), Expect = 4e-05
 Identities = 17/92 (18%), Positives = 36/92 (39%), Gaps = 5/92 (5%)

Query: 49  RGRCYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPF--ADLTPMEVGMKV 106
           +GR     +M+PE ++ +       + D W+   LL+E+   + PF           ++ 
Sbjct: 343 KGRVGTVGYMAPEVVKNERYTF---SPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVER 399

Query: 107 ALEGLRITIPPGISSHLSKLIRICMNEDPGKR 138
            ++ +        S     L    + +DP +R
Sbjct: 400 LVKEVPEEYSERFSPQARSLCSQLLCKDPAER 431

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* Length = 353

 Score = 41.1 bits (97), Expect = 5e-05
 Identities = 22/84 (26%), Positives = 41/84 (48%), Gaps = 5/84 (5%)

Query: 55  PAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRIT 114
           P +++PE +  +P  +   + D W+F VLL+E+   + PF      E+  +  +E   + 
Sbjct: 185 PDYIAPEIIAYQPYGK---SVDWWAFGVLLYEMLAGQAPFEGEDEDEL-FQSIMEH-NVA 239

Query: 115 IPPGISSHLSKLIRICMNEDPGKR 138
            P  +S     + +  M + PGKR
Sbjct: 240 YPKSMSKEAVAICKGLMTKHPGKR 263

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} Length = 396

 Score = 41.2 bits (97), Expect = 5e-05
 Identities = 22/92 (23%), Positives = 44/92 (47%), Gaps = 12/92 (13%)

Query: 55  PAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVG--------MKV 106
           P +++PE L+ +       + D W+  VL++E+     PF  +   +           +V
Sbjct: 217 PNYIAPEILRGEDYGF---SVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQV 273

Query: 107 ALEGLRITIPPGISSHLSKLIRICMNEDPGKR 138
            LE  +I IP  +S   + +++  +N+DP +R
Sbjct: 274 ILEK-QIRIPRSLSVKAASVLKSFLNKDPKER 304

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* Length = 345

 Score = 41.1 bits (97), Expect = 5e-05
 Identities = 20/91 (21%), Positives = 43/91 (47%), Gaps = 10/91 (10%)

Query: 55  PAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGL--- 111
           P +++PE L+ +       + D W+  VL++E+     PF  +   +   +   + L   
Sbjct: 174 PNYIAPEILRGEDYGF---SVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQV 230

Query: 112 ----RITIPPGISSHLSKLIRICMNEDPGKR 138
               +I IP  +S   + +++  +N+DP +R
Sbjct: 231 ILEKQIRIPRSLSVKAASVLKSFLNKDPKER 261

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304

 Score = 40.6 bits (96), Expect = 5e-05
 Identities = 26/95 (27%), Positives = 41/95 (43%), Gaps = 9/95 (9%)

Query: 55  PAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRIT 114
           P +++PE L +KP     +A D WS  V+ + L     PF + T  ++  K+  EG    
Sbjct: 171 PGYVAPEVLAQKPYS---KAVDCWSIGVITYILLCGYPPFYEETESKLFEKI-KEG-YYE 225

Query: 115 IP----PGISSHLSKLIRICMNEDPGKRPTFDMVL 145
                   IS      I   + +DP +R T +  L
Sbjct: 226 FESPFWDDISESAKDFICHLLEKDPNERYTCEKAL 260

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444

 Score = 40.7 bits (96), Expect = 6e-05
 Identities = 24/97 (24%), Positives = 38/97 (39%), Gaps = 12/97 (12%)

Query: 53  YYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLR 112
            Y   +SPE L+K P     +  D+W+  V+L+ L     PF D     +  ++   G  
Sbjct: 178 GY---LSPEVLRKDPYG---KPVDLWACGVILYILLVGYPPFWDEDQHRLYQQI-KAG-A 229

Query: 113 ITIP----PGISSHLSKLIRICMNEDPGKRPTFDMVL 145
              P      ++     LI   +  +P KR T    L
Sbjct: 230 YDFPSPEWDTVTPEAKDLINKMLTINPSKRITAAEAL 266

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} Length = 336

 Score = 40.3 bits (95), Expect = 7e-05
 Identities = 24/94 (25%), Positives = 39/94 (41%), Gaps = 4/94 (4%)

Query: 52  CYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGL 111
           C  P + +PE +  K      E  D+WS  ++L+ +    +PF D     +  KV     
Sbjct: 168 CGSPNYAAPEVINGKLYA-GPEV-DVWSCGIVLYVMLVGRLPFDDEFIPNLFKKV-NSC- 223

Query: 112 RITIPPGISSHLSKLIRICMNEDPGKRPTFDMVL 145
              +P  +S     LIR  +  DP +R T   + 
Sbjct: 224 VYVMPDFLSPGAQSLIRRMIVADPMQRITIQEIR 257

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362

 Score = 40.4 bits (95), Expect = 9e-05
 Identities = 25/97 (25%), Positives = 39/97 (40%), Gaps = 12/97 (12%)

Query: 53  YYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLR 112
            Y   +SPE L+K P     +  D+W+  V+L+ L     PF D     +  ++   G  
Sbjct: 195 GY---LSPEVLKKDPYS---KPVDIWACGVILYILLVGYPPFWDEDQHRLYAQI-KAG-A 246

Query: 113 ITIP----PGISSHLSKLIRICMNEDPGKRPTFDMVL 145
              P      ++     LI   +  +P KR T D  L
Sbjct: 247 YDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQAL 283

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360

 Score = 40.2 bits (94), Expect = 9e-05
 Identities = 18/97 (18%), Positives = 33/97 (34%), Gaps = 4/97 (4%)

Query: 55  PAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVG-MKVALEGLRI 113
            ++MSPE LQ           D+WS  + L E+A    P       E+  M         
Sbjct: 194 RSYMSPERLQGTHYS---VQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDA 250

Query: 114 TIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDK 150
              P       + +     +       F+++  I+++
Sbjct: 251 AETPPRPRTPGRPLNKFGMDSRPPMAIFELLDYIVNE 287

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} Length = 305

 Score = 39.9 bits (94), Expect = 1e-04
 Identities = 21/91 (23%), Positives = 36/91 (39%), Gaps = 3/91 (3%)

Query: 55  PAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRIT 114
           PA+  PE           +  D+WS  V L+ + T   PF      ++   +  +G    
Sbjct: 175 PAFQPPEIANGLDTFSGFKV-DIWSAGVTLYNITTGLYPFEGDNIYKLFENI-GKG-SYA 231

Query: 115 IPPGISSHLSKLIRICMNEDPGKRPTFDMVL 145
           IP      LS L++  +  +P KR +   + 
Sbjct: 232 IPGDCGPPLSDLLKGMLEYEPAKRFSIRQIR 262

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573

 Score = 40.2 bits (94), Expect = 1e-04
 Identities = 25/95 (26%), Positives = 32/95 (33%), Gaps = 9/95 (9%)

Query: 55  PAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRIT 114
             + +PE  + KP        DMWS  VL + L +   PF      E    V        
Sbjct: 320 AEFAAPEVAEGKPVG---YYTDMWSVGVLSYILLSGLSPFGGENDDETLRNV-KSC-DWN 374

Query: 115 IP----PGISSHLSKLIRICMNEDPGKRPTFDMVL 145
           +      GIS      IR  +  DP  R T    L
Sbjct: 375 MDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQAL 409

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 Length = 355

 Score = 39.6 bits (93), Expect = 1e-04
 Identities = 24/90 (26%), Positives = 41/90 (45%), Gaps = 11/90 (12%)

Query: 55  PAWMSPEALQ--KKPGDRNLEACDMWSFAVLLWELATREVPF----ADLTPMEVGMKVAL 108
             +M+P+ ++      D+   A D WS  VL++EL T   PF       +  E+  +  L
Sbjct: 224 IEYMAPDIVRGGDSGHDK---AVDWWSLGVLMYELLTGASPFTVDGEKNSQAEI-SRRIL 279

Query: 109 EGLRITIPPGISSHLSKLIRICMNEDPGKR 138
           +      P  +S+    LI+  + +DP KR
Sbjct: 280 KS-EPPYPQEMSALAKDLIQRLLMKDPKKR 308

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365

 Score = 39.7 bits (93), Expect = 2e-04
 Identities = 24/104 (23%), Positives = 43/104 (41%), Gaps = 9/104 (8%)

Query: 49  RGRCYYPAWMSPEALQKKPGDRNL---EACDMWSFAVLLWELATREVPFADLTPMEVGMK 105
           R  C  P +++PE L+    + +    +  D+W+  V+L+ L     PF     + +   
Sbjct: 257 RELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRM 316

Query: 106 VALEGLRITIP----PGISSHLSKLIRICMNEDPGKRPTFDMVL 145
           + +EG +           SS +  LI   +  DP  R T +  L
Sbjct: 317 I-MEG-QYQFSSPEWDDRSSTVKDLISRLLQVDPEARLTAEQAL 358

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373

 Score = 39.7 bits (93), Expect = 2e-04
 Identities = 19/95 (20%), Positives = 33/95 (34%), Gaps = 9/95 (9%)

Query: 55  PAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRIT 114
           P +++PE +            DMWS  V+ + L +   PF      E    + L   R  
Sbjct: 252 PEFLAPEVVNYDFVS---FPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNI-LAC-RWD 306

Query: 115 IP----PGISSHLSKLIRICMNEDPGKRPTFDMVL 145
           +       IS    + I   + ++   R +    L
Sbjct: 307 LEDEEFQDISEEAKEFISKLLIKEKSWRISASEAL 341

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} Length = 476

 Score = 39.4 bits (92), Expect = 2e-04
 Identities = 22/91 (24%), Positives = 40/91 (43%), Gaps = 4/91 (4%)

Query: 55  PAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRIT 114
           P + +PE +  +      E  D+WS  V+L+ L    +PF D     +  K+  +G    
Sbjct: 179 PNYAAPEVISGRLYA-GPEV-DIWSSGVILYALLCGTLPFDDDHVPTLFKKI-CDG-IFY 234

Query: 115 IPPGISSHLSKLIRICMNEDPGKRPTFDMVL 145
            P  ++  +  L++  +  DP KR T   + 
Sbjct: 235 TPQYLNPSVISLLKHMLQVDPMKRATIKDIR 265

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387

 Score = 38.9 bits (91), Expect = 2e-04
 Identities = 21/95 (22%), Positives = 35/95 (36%), Gaps = 9/95 (9%)

Query: 55  PAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRIT 114
             + +PE + ++P        DMW+  VL + L +   PFA    +E    V        
Sbjct: 214 AEFAAPEIVDREPVG---FYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNV-KRC-DWE 268

Query: 115 IP----PGISSHLSKLIRICMNEDPGKRPTFDMVL 145
                   +S      I+  + ++P KR T    L
Sbjct: 269 FDEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDAL 303

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326

 Score = 38.4 bits (90), Expect = 3e-04
 Identities = 23/97 (23%), Positives = 34/97 (35%), Gaps = 12/97 (12%)

Query: 53  YYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLR 112
            +   ++PE +  +P        DMWS  V+ + L +   PF   T  E    V      
Sbjct: 182 EF---VAPEIVNYEPLG---LEADMWSIGVITYILLSGASPFLGDTKQETLANV-SAV-N 233

Query: 113 ITIP----PGISSHLSKLIRICMNEDPGKRPTFDMVL 145
                      S+     IR  + +DP KR T    L
Sbjct: 234 YEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL 270

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* Length = 397

 Score = 38.7 bits (90), Expect = 3e-04
 Identities = 12/36 (33%), Positives = 17/36 (47%), Gaps = 3/36 (8%)

Query: 59  SPEALQKKPGDRNLEACDMWSFAVLLWELATREVPF 94
           S E L     +      D+WS A + +ELAT +  F
Sbjct: 261 SLEVLIGSGYN---TPADIWSTACMAFELATGDYLF 293

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316

 Score = 38.4 bits (90), Expect = 4e-04
 Identities = 22/114 (19%), Positives = 38/114 (33%), Gaps = 19/114 (16%)

Query: 51  RCYYPAWMSPEALQKKPGDRNL--EACDMWSFAVLLWELATREVPFADLTPMEVGMKVAL 108
            C    +M+PE ++    + ++  + CD+WS  V+L+ L +   PF      + G     
Sbjct: 181 PCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGE 240

Query: 109 EGLRITIP-----------------PGISSHLSKLIRICMNEDPGKRPTFDMVL 145
                                      IS     LI   +  D  +R +   VL
Sbjct: 241 ACPACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVL 294

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327

 Score = 38.4 bits (90), Expect = 4e-04
 Identities = 22/95 (23%), Positives = 41/95 (43%), Gaps = 9/95 (9%)

Query: 55  PAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRIT 114
           P +++PE L   P      A DMW+  ++ + L T   PF      E  + +  +   + 
Sbjct: 197 PEYLAPEILNYDPIT---TATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNI-SQV-NVD 251

Query: 115 IP----PGISSHLSKLIRICMNEDPGKRPTFDMVL 145
                   +S   +  I+  + ++P KRPT ++ L
Sbjct: 252 YSEETFSSVSQLATDFIQSLLVKNPEKRPTAEICL 286

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349

 Score = 38.1 bits (89), Expect = 4e-04
 Identities = 22/97 (22%), Positives = 33/97 (34%), Gaps = 11/97 (11%)

Query: 53  YYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLR 112
            Y    +PE L+           DMWS  ++ + L     PF D    +   +  L    
Sbjct: 215 GY---CAPEILRGCAYG---PEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNC-E 267

Query: 113 ITIP----PGISSHLSKLIRICMNEDPGKRPTFDMVL 145
                     +S +   L+R  +  DP KR T    L
Sbjct: 268 YYFISPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQAL 304

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361

 Score = 38.1 bits (89), Expect = 6e-04
 Identities = 21/95 (22%), Positives = 33/95 (34%), Gaps = 9/95 (9%)

Query: 55  PAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRIT 114
           P +++PE +  +P        DMWS  V+ + L +   PF   T  E    +        
Sbjct: 182 PEFVAPEIVNYEPLG---LEADMWSIGVITYILLSGASPFLGDTKQETLANI-TAV-SYD 236

Query: 115 IP----PGISSHLSKLIRICMNEDPGKRPTFDMVL 145
                    S      IR  + ++  KR T    L
Sbjct: 237 FDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEAL 271

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* Length = 299

 Score = 37.7 bits (88), Expect = 6e-04
 Identities = 22/92 (23%), Positives = 37/92 (40%), Gaps = 10/92 (10%)

Query: 60  PEALQKKPGDRNLEACDMWSFAVLLWELATREVPFAD--LTPMEVGMKVALEGLRITIP- 116
            E   +K      ++CDMWS  V+++ L     PF       +  GMK  +   +   P 
Sbjct: 168 KETTGEKYD----KSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPN 223

Query: 117 ---PGISSHLSKLIRICMNEDPGKRPTFDMVL 145
                +S  +  LIR  +  +P +R T    +
Sbjct: 224 PEWSEVSEEVKMLIRNLLKTEPTQRMTITEFM 255

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365

 Score = 37.6 bits (87), Expect = 7e-04
 Identities = 10/91 (10%), Positives = 22/91 (24%), Gaps = 9/91 (9%)

Query: 50  GRCYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALE 109
            +C    +   E L  KP +      D +  A  ++ +             E   +    
Sbjct: 244 AKCETSGFQCVEMLSNKPWN---YQIDYFGVAATVYCMLFGTYMKVKNEGGECKPEGLFR 300

Query: 110 GLRITIPPGISSHLSKLIRICMNEDPGKRPT 140
            L            ++   + +N        
Sbjct: 301 RLPHL------DMWNEFFHVMLNIPDCHHLP 325

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... Length = 276

 Score = 37.6 bits (88), Expect = 7e-04
 Identities = 17/92 (18%), Positives = 37/92 (40%), Gaps = 3/92 (3%)

Query: 55  PAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLT-PMEVGMKVALEGLRI 113
             +++PE L+++      E  D+WS  ++L  +   E+P+   +   +       +   +
Sbjct: 171 LPYVAPELLKRREFHA--EPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYL 228

Query: 114 TIPPGISSHLSKLIRICMNEDPGKRPTFDMVL 145
                I S    L+   + E+P  R T   + 
Sbjct: 229 NPWKKIDSAPLALLHKILVENPSARITIPDIK 260

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283

 Score = 37.2 bits (87), Expect = 8e-04
 Identities = 22/95 (23%), Positives = 34/95 (35%), Gaps = 9/95 (9%)

Query: 55  PAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRIT 114
           P +++PE +  +P        DMWS  V+ + L +   PF   T  E    +        
Sbjct: 175 PEFVAPEIVNYEPLG---LEADMWSIGVITYILLSGASPFLGETKQETLTNI-SAV-NYD 229

Query: 115 IP----PGISSHLSKLIRICMNEDPGKRPTFDMVL 145
                    S      IR  + +DP +R T    L
Sbjct: 230 FDEEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSL 264

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	153
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	100.0
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	100.0
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	100.0
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	100.0
4aoj_A	329	High affinity nerve growth factor receptor; transf	100.0
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	100.0
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	100.0
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	100.0
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	100.0
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	100.0
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	100.0
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	100.0
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	99.97
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	99.97
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	99.97
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	99.97
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	99.97
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.97
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	99.97
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	99.97
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	99.97
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	99.96
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	99.96
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	99.96
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	99.96
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	99.96
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	99.96
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	99.96
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	99.96
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	99.96
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	99.96
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	99.96
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	99.96
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	99.96
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	99.96
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	99.96
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	99.96
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	99.96
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	99.96
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	99.96
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	99.96
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	99.96
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	99.96
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	99.96
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	99.96
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	99.96
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	99.96
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	99.96
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	99.96
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	99.96
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	99.96
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	99.96
3pls_A	298	Macrophage-stimulating protein receptor; protein k	99.96
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	99.96
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	99.96
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	99.96
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	99.96
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	99.96
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	99.96
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	99.96
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	99.96
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	99.96
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	99.96
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	99.96
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	99.96
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	99.96
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	99.96
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	99.96
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	99.96
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	99.96
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	99.96
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	99.96
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	99.96
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	99.96
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	99.96
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	99.96
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	99.95
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	99.95
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	99.95
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	99.95
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	99.95
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	99.95
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	99.95
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	99.95
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	99.95
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	99.95
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	99.95
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	99.95
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	99.95
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	99.95
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	99.95
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	99.95
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	99.95
3soc_A	322	Activin receptor type-2A; structural genomics cons	99.95
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	99.95
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	99.95
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	99.95
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	99.95
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	99.95
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	99.95
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	99.95
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	99.95
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	99.95
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	99.95
3niz_A	311	Rhodanese family protein; structural genomics, str	99.95
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	99.95
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	99.95
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	99.95
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	99.95
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	99.95
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	99.95
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	99.95
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	99.95
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	99.95
3q4u_A	301	Activin receptor type-1; structural genomics conso	99.95
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	99.95
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	99.95
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	99.95
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	99.95
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	99.95
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	99.95
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	99.95
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	99.95
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	99.95
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	99.95
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	99.95
3fme_A	290	Dual specificity mitogen-activated protein kinase;	99.95
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	99.95
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	99.95
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	99.95
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	99.95
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	99.95
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	99.95
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	99.95
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	99.95
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	99.95
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	99.95
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	99.95
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	99.95
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	99.95
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	99.95
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	99.95
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	99.95
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	99.95
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	99.95
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	99.95
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	99.95
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	99.95
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	99.94
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	99.94
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	99.94
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.94
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	99.94
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	99.94
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	99.94
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	99.94
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	99.94
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	99.94
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	99.94
3an0_A	340	Dual specificity mitogen-activated protein kinase;	99.94
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	99.94
3o0g_A	292	Cell division protein kinase 5; kinase activator c	99.94
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	99.94
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	99.94
3ork_A	311	Serine/threonine protein kinase; structural genomi	99.94
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	99.94
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	99.94
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.94
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	99.94
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	99.94
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	99.94
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	99.94
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	99.94
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	99.94
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	99.94
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	99.94
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	99.94
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	99.94
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	99.94
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	99.94
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	99.94
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	99.94
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	99.94
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	99.94
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	99.94
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	99.94
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	99.94
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	99.94
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	99.94
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	99.94
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	99.94
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	99.94
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	99.94
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	99.94
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	99.94
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	99.94
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	99.94
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	99.94
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	99.94
2a19_B	284	Interferon-induced, double-stranded RNA-activated	99.94
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	99.94
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	99.94
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	99.94
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	99.94
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	99.94
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	99.94
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	99.94
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	99.94
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	99.94
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	99.94
3rp9_A	458	Mitogen-activated protein kinase; structural genom	99.94
2dyl_A	318	Dual specificity mitogen-activated protein kinase	99.94
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	99.94
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	99.94
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	99.94
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	99.93
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	99.93
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	99.93
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	99.93
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	99.93
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	99.93
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	99.93
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	99.93
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	99.93
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	99.93
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	99.93
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	99.93
3bhy_A	283	Death-associated protein kinase 3; death associate	99.93
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	99.93
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	99.93
3aln_A	327	Dual specificity mitogen-activated protein kinase;	99.93
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	99.93
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	99.93
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	99.93
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	99.93
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	99.93
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	99.93
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	99.93
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	99.93
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	99.92
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	99.92
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	99.92
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	99.91
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	99.88
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	99.88
3uqc_A	286	Probable conserved transmembrane protein; structur	99.87
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	99.86
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	99.8
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	99.53
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	99.03
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	98.37
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	97.77
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	96.44
2yle_A	229	Protein spire homolog 1; actin-binding protein, ac	94.35
3sg8_A	304	APH(2'')-ID; antibiotic resistance enzyme, transfe	88.71
1nd4_A	264	Aminoglycoside 3'-phosphotransferase; protein kina	88.35
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	85.15
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	83.92
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	83.44
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	82.54
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	82.14
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	81.71
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	80.64
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	80.42

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=100.00  E-value=9.9e-39  Score=216.13  Aligned_cols=148  Identities=18%  Similarity=0.313  Sum_probs=123.2

Q ss_pred             cchhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc---------CCcccCCcccCccccccCCCCCCcc
Q psy12581          3 KKKIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ---------RGRCYYPAWMSPEALQKKPGDRNLE   73 (153)
Q Consensus         3 ~~~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~---------~~~~~~~~~~~pe~~~~~~~~~~~~   73 (153)
                      ...+-++.|||+++|+|+||++.||+++.++.+||.  |||++...         ...+||+.|||||++.+.....++.
T Consensus       139 ~qia~gL~yLH~~~IiHRDlKp~NILl~~~~~~Ki~--DFGla~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~  216 (307)
T 3omv_A          139 RQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIG--DFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSF  216 (307)
T ss_dssp             HHHHHHHHHHHHTTCBCSCCCSSSEEEETTEEEEEC--CCSSCBC------------CCCCTTSCCHHHHHCCSSCCCCH
T ss_pred             HHHHHHHHHHHHCCccCCccCHHHEEECCCCcEEEe--eccCceecccCCcceeecccccCCCccCHHHhhccCCCCCCc
Confidence            345678999999999999999999999999999999  99998432         2347999999999997654445778


Q ss_pred             hhhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhcccc----CCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHh
Q psy12581         74 ACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRI----TIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILD  149 (153)
Q Consensus        74 ~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~  149 (153)
                      ++||||||+++||+++|+.||.+..........+..+...    ..+..++..+.+++.+||+.||++|||+.++++.|+
T Consensus       217 ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le  296 (307)
T 3omv_A          217 QSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIE  296 (307)
T ss_dssp             HHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHTTCCCCCSTTSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHH
T ss_pred             HHHhHhHHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCCCCCcccccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHH
Confidence            9999999999999999999998877666555555444322    245668899999999999999999999999999998


Q ss_pred             hhh
Q psy12581        150 KMK  152 (153)
Q Consensus       150 ~~~  152 (153)
                      .++
T Consensus       297 ~l~  299 (307)
T 3omv_A          297 LLQ  299 (307)
T ss_dssp             HHH
T ss_pred             HHh
Confidence            775

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=100.00  E-value=3e-38  Score=217.62  Aligned_cols=144  Identities=22%  Similarity=0.346  Sum_probs=126.5

Q ss_pred             chhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc---------CCcccCCcccCccccccCCCCCCcch
Q psy12581          4 KKIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ---------RGRCYYPAWMSPEALQKKPGDRNLEA   74 (153)
Q Consensus         4 ~~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~---------~~~~~~~~~~~pe~~~~~~~~~~~~~   74 (153)
                      ..+-++.|||+++|+|+||++.||+++.++.+||+  |||++...         ...+||+.|||||.+.+.   .++.+
T Consensus       193 qia~gl~yLH~~~iiHRDLK~~NILl~~~~~vKi~--DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~---~y~~k  267 (353)
T 4ase_A          193 QVAKGMEFLASRKCIHRDLAARNILLSEKNVVKIC--DFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDR---VYTIQ  267 (353)
T ss_dssp             HHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEEC--CCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHC---CCCHH
T ss_pred             HHHHHHHhHhhCCeecCccCccceeeCCCCCEEEC--cchhhhhcccCCCceeeccccccccccCHHHHhcC---CCCCc
Confidence            45568899999999999999999999999999999  99998432         234688999999999875   45699


Q ss_pred             hhHHHHHHHHHHHHh-CCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHhhhh
Q psy12581         75 CDMWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKMK  152 (153)
Q Consensus        75 ~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~~~~  152 (153)
                      +||||||+++||++| |..||.+..........+..+.+++.|..+++++.+++.+||+.||++|||+.++++.|+++.
T Consensus       268 sDVwS~Gv~l~El~t~G~~Pf~~~~~~~~~~~~i~~g~~~~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~ll  346 (353)
T 4ase_A          268 SDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL  346 (353)
T ss_dssp             HHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             ccEeehHHHHHHHHhCCCCCCCCCCHHHHHHHHHHcCCCCCCCccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHH
Confidence            999999999999998 899999877666666677777788889999999999999999999999999999999998763

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=100.00  E-value=1.4e-37  Score=211.07  Aligned_cols=144  Identities=21%  Similarity=0.319  Sum_probs=124.2

Q ss_pred             cchhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc---------CCcccCCcccCccccccCCCCCCcc
Q psy12581          3 KKKIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ---------RGRCYYPAWMSPEALQKKPGDRNLE   73 (153)
Q Consensus         3 ~~~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~---------~~~~~~~~~~~pe~~~~~~~~~~~~   73 (153)
                      .+.+-++.|||+++|+|+||++.||+++.++.+||+  |||++...         +...||+.|||||.+.+.   .++.
T Consensus       152 ~qia~gl~yLH~~~iiHRDLK~~NILl~~~~~~Ki~--DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~---~~s~  226 (308)
T 4gt4_A          152 AQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKIS--DLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYG---KFSI  226 (308)
T ss_dssp             HHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEEC--CSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHC---CCCH
T ss_pred             HHHHHHHHHHHhCCCCCCCccccceEECCCCCEEEC--CcccceeccCCCceeEecccccCCcccCHHHHhCC---CCCc
Confidence            345668999999999999999999999999999999  99998422         335788999999999864   4569


Q ss_pred             hhhHHHHHHHHHHHHh-CCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHhhhh
Q psy12581         74 ACDMWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKMK  152 (153)
Q Consensus        74 ~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~~~~  152 (153)
                      ++||||||+++||++| |..||.+....+....+ ..+..++.|..++..+.+++.+||+.||++|||+.+|++.|+.+.
T Consensus       227 ksDVwSfGvvl~El~t~g~~Pf~~~~~~~~~~~i-~~~~~~~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~~  305 (308)
T 4gt4_A          227 DSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMI-RNRQVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAWG  305 (308)
T ss_dssp             HHHHHHHHHHHHHHHTTTCCTTTTCCHHHHHHHH-HTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSC
T ss_pred             cchhhhHHHHHHHHHhCCCCCCCCCCHHHHHHHH-HcCCCCCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhcc
Confidence            9999999999999998 89999988776665544 455567778889999999999999999999999999999998764

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=100.00  E-value=1e-37  Score=210.92  Aligned_cols=143  Identities=22%  Similarity=0.377  Sum_probs=123.2

Q ss_pred             chhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc---------CCcccCCcccCccccccCCCCCCcch
Q psy12581          4 KKIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ---------RGRCYYPAWMSPEALQKKPGDRNLEA   74 (153)
Q Consensus         4 ~~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~---------~~~~~~~~~~~pe~~~~~~~~~~~~~   74 (153)
                      ..+-++.|||+++|+|+||++.||+++.++.+||.  |||++...         ....||+.|||||.+.+.   .++.+
T Consensus       136 qia~gl~yLH~~~iiHRDlKp~NILl~~~~~~Ki~--DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~---~~~~k  210 (299)
T 4asz_A          136 QIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIG--DFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYR---KFTTE  210 (299)
T ss_dssp             HHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEEC--CCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHC---CCCHH
T ss_pred             HHHHHHHHHHhCCcccCccCHhhEEECCCCcEEEC--CcccceecCCCCceeecCceecChhhcCHHHHcCC---CCCch
Confidence            45567899999999999999999999999999999  99998321         223688999999999864   45699


Q ss_pred             hhHHHHHHHHHHHHh-CCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHhhhh
Q psy12581         75 CDMWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKMK  152 (153)
Q Consensus        75 ~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~~~~  152 (153)
                      +||||||+++||++| |+.||.+....+....+. .+..++.|..++.++.+++.+||+.||++|||++++.+.|+++.
T Consensus       211 ~DVwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~i~-~~~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~  288 (299)
T 4asz_A          211 SDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECIT-QGRVLQRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLA  288 (299)
T ss_dssp             HHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHH-HTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHH-cCCCCCCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence            999999999999998 899999888776665544 45566778889999999999999999999999999999998874

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=100.00  E-value=1.9e-37  Score=212.02  Aligned_cols=143  Identities=22%  Similarity=0.379  Sum_probs=120.6

Q ss_pred             chhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc---------CCcccCCcccCccccccCCCCCCcch
Q psy12581          4 KKIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ---------RGRCYYPAWMSPEALQKKPGDRNLEA   74 (153)
Q Consensus         4 ~~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~---------~~~~~~~~~~~pe~~~~~~~~~~~~~   74 (153)
                      ..+-++.|||+++|+|+||++.||+++.++.+||.  |||++...         ....||+.|||||.+.+.   .++.+
T Consensus       166 qia~gl~yLH~~~iiHRDLKp~NILl~~~~~~Ki~--DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~---~~~~~  240 (329)
T 4aoj_A          166 QVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIG--DFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYR---KFTTE  240 (329)
T ss_dssp             HHHHHHHHHHHTTCCCSCCCGGGEEEETTTEEEEC--CCC----------------CCCCGGGCCHHHHTTC---CCCHH
T ss_pred             HHHHHHHHHhcCCeecccccHhhEEECCCCcEEEc--ccccceeccCCCcceecCcccccccccChhhhcCC---CCCcc
Confidence            45667899999999999999999999999999999  99998432         234689999999999864   45699


Q ss_pred             hhHHHHHHHHHHHHh-CCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHhhhh
Q psy12581         75 CDMWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKMK  152 (153)
Q Consensus        75 ~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~~~~  152 (153)
                      +||||||+++||++| |+.||.+....+....+. .+.+++.|..+++++.+++.+||+.||++|||++++++.|+.+.
T Consensus       241 sDvwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~i~-~g~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~  318 (329)
T 4aoj_A          241 SDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCIT-QGRELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALA  318 (329)
T ss_dssp             HHHHHHHHHHHHHHTTSCCTTCSSCHHHHHHHHH-HTCCCCCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHH
T ss_pred             ccccchHHHHHHHHcCCCCCCCCCCHHHHHHHHH-cCCCCCCcccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHh
Confidence            999999999999998 899999887776655544 55567788889999999999999999999999999999998874

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=100.00  E-value=5.1e-36  Score=204.81  Aligned_cols=142  Identities=17%  Similarity=0.173  Sum_probs=119.9

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeecccc-chhhccccccccccc------------CCcccCCcccCccccccCCCCCC
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDL-TARINMADAQFSFQQ------------RGRCYYPAWMSPEALQKKPGDRN   71 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~-~~kl~~~d~g~~~~~------------~~~~~~~~~~~pe~~~~~~~~~~   71 (153)
                      ..-++.|||+++|+|+||++.||+++.+| .+||.  |||++...            ...+||+.|||||++.+.+   +
T Consensus       159 i~~aL~ylH~~~IiHRDlKp~NILl~~~g~~vKl~--DFGla~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~---y  233 (336)
T 4g3f_A          159 ALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALC--DFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKP---C  233 (336)
T ss_dssp             HHHHHHHHHTTTEECSCCCGGGEEECTTSCCEEEC--CCTTCEEC------------CCCCCCGGGCCHHHHTTCC---C
T ss_pred             HHHHHHHHHHCCceecccCHHHEEEeCCCCEEEEe--eCCCCeEccCCCcccceecCCccccCccccCHHHHCCCC---C
Confidence            45678999999999999999999999987 58888  99998432            1247999999999998753   4


Q ss_pred             cchhhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccc-cCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHhh
Q psy12581         72 LEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLR-ITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDK  150 (153)
Q Consensus        72 ~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~~  150 (153)
                      +.++|+||+|+++|+|++|+.||.+.........+...... ...|..+++.+.+++.+||+.||++|||+.|+++.|.+
T Consensus       234 ~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~  313 (336)
T 4g3f_A          234 DAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIASEPPPIREIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGK  313 (336)
T ss_dssp             CTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCHHHHHHSCCGGGGSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             CcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHcCCCCchhcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHH
Confidence            58999999999999999999999887777766666655432 24677899999999999999999999999999988865


Q ss_pred             h
Q psy12581        151 M  151 (153)
Q Consensus       151 ~  151 (153)
                      .
T Consensus       314 ~  314 (336)
T 4g3f_A          314 A  314 (336)
T ss_dssp             H
T ss_pred             H
Confidence            4

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=100.00  E-value=1.2e-35  Score=198.21  Aligned_cols=136  Identities=22%  Similarity=0.273  Sum_probs=110.5

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc------CCcccCCcccCccccccCCCCCCcchhhHH
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ------RGRCYYPAWMSPEALQKKPGDRNLEACDMW   78 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~------~~~~~~~~~~~pe~~~~~~~~~~~~~~dv~   78 (153)
                      ..-++.|||+++|.|+||++.||+++.++.+|+.  |||++...      .+.+||+.|+|||++.+..+  .+.++|+|
T Consensus       121 i~~al~ylH~~~IiHRDiKP~NILl~~~~~vkl~--DFGla~~~~~~~~~~~~~GT~~Y~APE~~~~~~y--~~~~~Diw  196 (275)
T 3hyh_A          121 IISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIA--DFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLY--AGPEVDVW  196 (275)
T ss_dssp             HHHHHHHHHHTTCCCCCCCTTTEEECTTCCEEEC--CSSCC---------------CTTSCHHHHSSSSC--CCTHHHHH
T ss_pred             HHHHHHHHHHCCcccccCChHHeEECCCCCEEEe--ecCCCeecCCCCccCCeeECcccCChhhhcCCCC--CCChhhhH
Confidence            3457899999999999999999999999999988  99998432      34589999999999987533  24789999


Q ss_pred             HHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581         79 SFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus        79 s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      |+|+++|++++|+.||.+.+.......+...  ..+.|...++++.+++.+||+.||++|||++++++
T Consensus       197 SlGvily~lltg~~PF~~~~~~~~~~~i~~~--~~~~p~~~s~~~~~li~~~L~~dP~~R~s~~eil~  262 (275)
T 3hyh_A          197 SCGVILYVMLCRRLPFDDESIPVLFKNISNG--VYTLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQ  262 (275)
T ss_dssp             HHHHHHHHHHHSSCSSCCSSHHHHHHHHHHT--CCCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHHHHCCCCCCCCCHHHHHHHHHcC--CCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHc
Confidence            9999999999999999887766665555444  34567789999999999999999999999999986

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=100.00  E-value=7.5e-36  Score=204.57  Aligned_cols=137  Identities=18%  Similarity=0.262  Sum_probs=114.8

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc-------CCcccCCcccCccccccCCCCCCcchhhH
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ-------RGRCYYPAWMSPEALQKKPGDRNLEACDM   77 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~-------~~~~~~~~~~~pe~~~~~~~~~~~~~~dv   77 (153)
                      ..-++.|||+++|+|+||++.||+++.+|.+||.  |||++...       ...+||+.|+|||++.+.   .++.++|+
T Consensus       179 i~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~--DFGla~~~~~~~~~~~~~~GTp~YmAPEvl~~~---~y~~~~Di  253 (346)
T 4fih_A          179 VLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLS--DFGFCAQVSKEVPRRKSLVGTPYWMAPELISRL---PYGPEVDI  253 (346)
T ss_dssp             HHHHHHHHHHTTEECCCCSGGGEEECTTCCEEEC--CCTTCEECCSSSCCBCCCCSCGGGCCHHHHTTC---CBCTHHHH
T ss_pred             HHHHHHHHHHCCcccccCCHHHEEECCCCCEEEe--cCcCceecCCCCCcccccccCcCcCCHHHHCCC---CCCcHHHH
Confidence            4567899999999999999999999999999988  99998432       345899999999999765   34589999


Q ss_pred             HHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhcc-ccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581         78 WSFAVLLWELATREVPFADLTPMEVGMKVALEGL-RITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus        78 ~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      ||+|+++|||++|+.||.+.........+..... ....+..+++++.+++.+||+.||++|||++++++
T Consensus       254 WSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~  323 (346)
T 4fih_A          254 WSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLK  323 (346)
T ss_dssp             HHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSSCCCCSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             HHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCCCCCCccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence            9999999999999999998877766655543321 22334568999999999999999999999999975

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=100.00  E-value=5.1e-36  Score=205.65  Aligned_cols=136  Identities=18%  Similarity=0.232  Sum_probs=117.6

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc-------CCcccCCcccCccccccCCCCCCcchhhH
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ-------RGRCYYPAWMSPEALQKKPGDRNLEACDM   77 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~-------~~~~~~~~~~~pe~~~~~~~~~~~~~~dv   77 (153)
                      ..-++.|||+++|+|+||++.||+++.+|.+||.  |||++...       ...+||+.|+|||++.+.   .++.++|+
T Consensus       134 i~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~--DFGla~~~~~~~~~~~~~~GT~~YmAPE~l~~~---~y~~~~Di  208 (350)
T 4b9d_A          134 ICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLG--DFGIARVLNSTVELARACIGTPYYLSPEICENK---PYNNKSDI  208 (350)
T ss_dssp             HHHHHHHHHHTTCEETTCCGGGEEECTTCCEEEC--STTEESCCCHHHHHHHHHHSCCTTCCHHHHTTC---CCCHHHHH
T ss_pred             HHHHHHHHHHCCeeeccCCHHHEEECCCCCEEEc--ccccceeecCCcccccccCCCccccCHHHHCCC---CCCcHHHH
Confidence            3457899999999999999999999999999988  99998543       234799999999999875   35589999


Q ss_pred             HHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581         78 WSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus        78 ~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      ||+|+++|++++|+.||.+.+......++.... .++.+..++.++.+++.+||+.||++|||++++++
T Consensus       209 wSlGvilyemltG~~PF~~~~~~~~~~~i~~~~-~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~  276 (350)
T 4b9d_A          209 WALGCVLYELCTLKHAFEAGSMKNLVLKIISGS-FPPVSLHYSYDLRSLVSQLFKRNPRDRPSVNSILE  276 (350)
T ss_dssp             HHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTC-CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             HHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCC-CCCCCccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            999999999999999999888777776666443 34566779999999999999999999999999975

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=100.00  E-value=1.8e-35  Score=198.85  Aligned_cols=136  Identities=15%  Similarity=0.246  Sum_probs=111.8

Q ss_pred             hhhHHhhhhcCC--CCCCCeeeeeeeec-cccchhhccccccccccc-----CCcccCCcccCccccccCCCCCCcchhh
Q psy12581          5 KIVYSFYLNSKK--SKTSNAFLFCCQID-EDLTARINMADAQFSFQQ-----RGRCYYPAWMSPEALQKKPGDRNLEACD   76 (153)
Q Consensus         5 ~~~~~~~lh~~~--i~~~ni~~~~~~~~-~~~~~kl~~~d~g~~~~~-----~~~~~~~~~~~pe~~~~~~~~~~~~~~d   76 (153)
                      ..-++.|||+++  |+|+||++.||+++ .+|.+||.  |||++...     ...+||+.|||||++.+    .++.++|
T Consensus       138 i~~aL~ylH~~~~~IiHRDlKp~NILl~~~~g~vKl~--DFGla~~~~~~~~~~~~GTp~YmAPE~~~~----~y~~~~D  211 (290)
T 3fpq_A          138 ILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIG--DLGLATLKRASFAKAVIGTPEFMAPEMYEE----KYDESVD  211 (290)
T ss_dssp             HHHHHHHHHTSSSCCCCCCCCGGGEEESSTTSCEEEC--CTTGGGGCCTTSBEESCSSCCCCCGGGGGT----CCCTHHH
T ss_pred             HHHHHHHHHHCCCCEEecccChhheeEECCCCCEEEE--eCcCCEeCCCCccCCcccCccccCHHHcCC----CCCcHHH
Confidence            455789999998  99999999999997 47888888  99998432     23489999999999864    3568999


Q ss_pred             HHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhcc-ccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581         77 MWSFAVLLWELATREVPFADLTPMEVGMKVALEGL-RITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus        77 v~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      +||+|+++|++++|+.||.+..........+..+. ....+...++++.+++.+||+.||++|||++++++
T Consensus       212 iwSlGvilyelltg~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~  282 (290)
T 3fpq_A          212 VYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLN  282 (290)
T ss_dssp             HHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCCGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             HHHHHHHHHHHHHCCCCCCCCCcHHHHHHHHHcCCCCCCCCccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            99999999999999999987665555444444433 23345667899999999999999999999999985

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=100.00  E-value=3.4e-35  Score=198.49  Aligned_cols=135  Identities=20%  Similarity=0.296  Sum_probs=115.3

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc-------CCcccCCcccCccccccCCCCCCcchhhH
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ-------RGRCYYPAWMSPEALQKKPGDRNLEACDM   77 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~-------~~~~~~~~~~~pe~~~~~~~~~~~~~~dv   77 (153)
                      ..-++.|||+++|.|+||++.||+++.+|.+||.  |||++...       ...+||+.|||||++.+..   ++.++|+
T Consensus       135 i~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~--DFGla~~~~~~~~~~~~~~GT~~YmAPE~~~~~~---y~~~~Di  209 (304)
T 3ubd_A          135 LALALDHLHSLGIIYRDLKPENILLDEEGHIKLT--DFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRG---HTQSADW  209 (304)
T ss_dssp             HHHHHHHHHHTTCCCSSCCGGGEEECTTSCEEEE--SSEEEEC-----CCCCSCCCCGGGCCHHHHHTSC---CCTHHHH
T ss_pred             HHHHHHHHHHCCCcCCCCCHHHeEEcCCCCEEec--ccccceeccCCCccccccccCcccCCHHHhccCC---CCCCCcc
Confidence            3557899999999999999999999999999998  99998432       3458999999999998753   4589999


Q ss_pred             HHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCH-----HHHHH
Q psy12581         78 WSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTF-----DMVLP  146 (153)
Q Consensus        78 ~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~-----~~~l~  146 (153)
                      ||+|+++|++++|+.||.+.+..+....+...  ..+.|..+++++.+++.+||+.||++|||+     +++++
T Consensus       210 wSlGvilyemltG~~PF~~~~~~~~~~~i~~~--~~~~p~~~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~  281 (304)
T 3ubd_A          210 WSFGVLMFEMLTGTLPFQGKDRKETMTMILKA--KLGMPQFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKR  281 (304)
T ss_dssp             HHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC--CCCCCTTSCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHT
T ss_pred             cchHHHHHHHHhCCCCCCCcCHHHHHHHHHcC--CCCCCCcCCHHHHHHHHHHcccCHHHCCCCCcCCHHHHHc
Confidence            99999999999999999988877777666654  345678899999999999999999999984     56653

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=100.00  E-value=1.5e-35  Score=200.40  Aligned_cols=134  Identities=17%  Similarity=0.183  Sum_probs=116.1

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc---------CCcccCCcccCccccccCCCCCCcchh
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ---------RGRCYYPAWMSPEALQKKPGDRNLEAC   75 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~---------~~~~~~~~~~~pe~~~~~~~~~~~~~~   75 (153)
                      ..-++.|||+++|.|+||++.||+++.+|.+||.  |||++...         .+.+||+.|+|||++.+..   ++.++
T Consensus       141 i~~al~ylH~~~IiHRDlKPeNILl~~~g~vKl~--DFGla~~~~~~~~~~~~~~~~GTp~YmAPEvl~~~~---y~~~~  215 (311)
T 4aw0_A          141 IVSALEYLHGKGIIHRDLKPENILLNEDMHIQIT--DFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKS---ACKSS  215 (311)
T ss_dssp             HHHHHHHHHHTTEECSCCSGGGEEECTTSCEEEC--CCTTCEECCTTTTCCCBCCCCSCGGGCCHHHHHHSC---BCHHH
T ss_pred             HHHHHHHHHHCCCccCCCCHHHeEEcCCCCEEEE--EcCCceecCCCCCcccccCcccCcccCCHHHHcCCC---CCcHH
Confidence            3457899999999999999999999999999988  99998432         3458999999999998753   45899


Q ss_pred             hHHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHH
Q psy12581         76 DMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVL  145 (153)
Q Consensus        76 dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l  145 (153)
                      |+||+|+++|+|++|..||.+.+......++....  ...|..+++++.+++.+||+.||++|||+++++
T Consensus       216 DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~--~~~p~~~s~~~~dli~~lL~~dp~~R~t~~e~~  283 (311)
T 4aw0_A          216 DLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLE--YDFPEKFFPKARDLVEKLLVLDATKRLGCEEME  283 (311)
T ss_dssp             HHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTC--CCCCTTCCHHHHHHHHHHSCSSGGGSTTSGGGT
T ss_pred             HHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCC--CCCCcccCHHHHHHHHHHccCCHhHCcChHHHc
Confidence            99999999999999999999888777777766553  455788999999999999999999999998863

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=100.00  E-value=2.9e-35  Score=206.12  Aligned_cols=137  Identities=18%  Similarity=0.262  Sum_probs=115.8

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc-------CCcccCCcccCccccccCCCCCCcchhhH
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ-------RGRCYYPAWMSPEALQKKPGDRNLEACDM   77 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~-------~~~~~~~~~~~pe~~~~~~~~~~~~~~dv   77 (153)
                      ..-++.|||+++|+|+||++.||+++.+|.+||.  |||++...       ...+||+.|||||++.+.   .++.++|+
T Consensus       256 il~aL~ylH~~~IiHRDiKp~NILl~~~g~vKl~--DFGla~~~~~~~~~~~~~~GTp~YmAPEvl~~~---~y~~~~Di  330 (423)
T 4fie_A          256 VLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLS--DFGFCAQVSKEVPRRKSLVGTPYWMAPELISRL---PYGPEVDI  330 (423)
T ss_dssp             HHHHHHHHHHTTEECCCCSTTTEEECTTCCEEEC--CCTTCEECCSSCCCBCCCEECTTTCCHHHHTTC---CBCTHHHH
T ss_pred             HHHHHHHHHHCCeecccCCHHHEEEcCCCCEEEe--cCccceECCCCCccccccccCcCcCCHHHHCCC---CCCcHHHH
Confidence            4568899999999999999999999999999988  99998432       345899999999999865   34589999


Q ss_pred             HHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhcc-ccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581         78 WSFAVLLWELATREVPFADLTPMEVGMKVALEGL-RITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus        78 ~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      ||+||++|||++|+.||.+.........+..... ....+..+++++.+|+.+||+.||++|||++++++
T Consensus       331 WSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~ell~  400 (423)
T 4fie_A          331 WSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLK  400 (423)
T ss_dssp             HHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCSCTTSSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             HHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCCCCCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence            9999999999999999998877776655543321 33445678999999999999999999999999975

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=100.00  E-value=9.6e-35  Score=197.06  Aligned_cols=148  Identities=18%  Similarity=0.202  Sum_probs=109.3

Q ss_pred             cchhhHHhhhhcC--------CCCCCCeeeeeeeeccccchhhccccccccccc-----------CCcccCCcccCcccc
Q psy12581          3 KKKIVYSFYLNSK--------KSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ-----------RGRCYYPAWMSPEAL   63 (153)
Q Consensus         3 ~~~~~~~~~lh~~--------~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~-----------~~~~~~~~~~~pe~~   63 (153)
                      +..+-++.|||++        +|+|+||++.||+++.++.+||+  |||++...           ...+||+.|||||.+
T Consensus       107 ~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~--DFGla~~~~~~~~~~~~~~~~~~GT~~ymAPE~l  184 (303)
T 3hmm_A          107 LSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIA--DLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVL  184 (303)
T ss_dssp             HHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEEC--CCTTCEEEETTTTEESCC-----CCGGGCCHHHH
T ss_pred             HHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEE--eCCCCccccCCCCceeeecccccccccccCHHHh
Confidence            3456678999976        89999999999999999999999  99997322           124799999999998


Q ss_pred             ccCCC---CCCcchhhHHHHHHHHHHHHhCCCCCCCC----------Cc----hhhh-HHHHhhccccCCCCC-----CC
Q psy12581         64 QKKPG---DRNLEACDMWSFAVLLWELATREVPFADL----------TP----MEVG-MKVALEGLRITIPPG-----IS  120 (153)
Q Consensus        64 ~~~~~---~~~~~~~dv~s~g~~~~~~~~g~~p~~~~----------~~----~~~~-~~~~~~~~~~~~~~~-----~~  120 (153)
                      .+...   ..++.++||||||+++||++||..|+...          ..    .... ..+.....++..|..     .+
T Consensus       185 ~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~rp~~p~~~~~~~~~  264 (303)
T 3hmm_A          185 DDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEAL  264 (303)
T ss_dssp             TTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHH
T ss_pred             cccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccchHHHHHHHHhcccCCCCCCccccchHHH
Confidence            75321   12457899999999999999997665321          11    1111 122333444544433     23


Q ss_pred             HHHHHHHHHHhcCCCCCCCCHHHHHHHHhhhh
Q psy12581        121 SHLSKLIRICMNEDPGKRPTFDMVLPILDKMK  152 (153)
Q Consensus       121 ~~~~~l~~~cl~~~p~~Rps~~~~l~~L~~~~  152 (153)
                      ..+.+++.+||+.||++|||+.++++.|+++.
T Consensus       265 ~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~  296 (303)
T 3hmm_A          265 RVMAKIMRECWYANGAARLTALRIKKTLSQLS  296 (303)
T ss_dssp             HHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHcccCHhHCcCHHHHHHHHHHHH
Confidence            46889999999999999999999999999875

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=99.97  E-value=3.4e-32  Score=190.23  Aligned_cols=138  Identities=14%  Similarity=0.115  Sum_probs=112.0

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc-----------CCcccCCcccCccccccCCCCCCcc
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ-----------RGRCYYPAWMSPEALQKKPGDRNLE   73 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~-----------~~~~~~~~~~~pe~~~~~~~~~~~~   73 (153)
                      ..-++.|||+++|+|+||++.||+++.+|.+|+.  |||++...           .+.+||+.|+|||++.+..  .++.
T Consensus       167 il~al~ylH~~~iiHRDlKP~NIl~~~~~~~Ki~--DFGla~~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~--~~~~  242 (398)
T 4b99_A          167 LLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIG--DFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLH--EYTQ  242 (398)
T ss_dssp             HHHHHHHHHHTTCBCCCCCGGGEEECTTCCEEEC--CCTTCBCC-------CCCCCSSCCCCTTCCHHHHTTCS--CCCT
T ss_pred             HHHHHHHHHHCcCcCCCcCccccccCCCCCEEEe--ecceeeecccCccccccccccceeChHhcCHHHhcCCC--CCCC
Confidence            3457899999999999999999999999999998  99998432           2458999999999987642  3458


Q ss_pred             hhhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccC----------------------C-------CCCCCHHHH
Q psy12581         74 ACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRIT----------------------I-------PPGISSHLS  124 (153)
Q Consensus        74 ~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~----------------------~-------~~~~~~~~~  124 (153)
                      ++|+||+||++|+|++|+.||.+.+.......+......++                      .       ....++++.
T Consensus       243 ~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~  322 (398)
T 4b99_A          243 AIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQAL  322 (398)
T ss_dssp             HHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCGGGTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHH
T ss_pred             hhheehhHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHH
Confidence            89999999999999999999998877766655543211110                      0       124578999


Q ss_pred             HHHHHHhcCCCCCCCCHHHHHH
Q psy12581        125 KLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus       125 ~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      +|+.+||+.||++|||++++++
T Consensus       323 dLl~~mL~~dP~~R~ta~e~L~  344 (398)
T 4b99_A          323 SLLGRMLRFEPSARISAAAALR  344 (398)
T ss_dssp             HHHHHHSCSSTTTSCCHHHHTT
T ss_pred             HHHHHHCcCChhHCcCHHHHhc
Confidence            9999999999999999999875

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=99.97  E-value=4.5e-32  Score=180.94  Aligned_cols=149  Identities=63%  Similarity=1.019  Sum_probs=128.4

Q ss_pred             hhhHHhhhhcCC--CCCCCeeeeeeeeccccchhhcccccccccccCCcccCCcccCccccccCCCCCCcchhhHHHHHH
Q psy12581          5 KIVYSFYLNSKK--SKTSNAFLFCCQIDEDLTARINMADAQFSFQQRGRCYYPAWMSPEALQKKPGDRNLEACDMWSFAV   82 (153)
Q Consensus         5 ~~~~~~~lh~~~--i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~dv~s~g~   82 (153)
                      ..-++.|||+++  +.|+||.+.||+++.++.+++...|||.+.......+++.|++||.+.+......+.++|+||+|+
T Consensus       120 i~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~  199 (271)
T 3kmu_A          120 MARGMAFLHTLEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQSPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAV  199 (271)
T ss_dssp             HHHHHHHHTTSSSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTSCTTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHH
T ss_pred             HHHHHHHHhcCCCceecCCCccceEEEcCCcceeEEeccceeeecccCccCCccccChhhhccCCCCCCCchhhHHHHHH
Confidence            345789999999  999999999999999999999856666666666778899999999988654444445899999999


Q ss_pred             HHHHHHhCCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHhhhhC
Q psy12581         83 LLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKMKR  153 (153)
Q Consensus        83 ~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~~~~~  153 (153)
                      ++|++++|..||.+................+..+...+..+.+++.+||+.||++|||++++++.|+++.+
T Consensus       200 il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l~~  270 (271)
T 3kmu_A          200 LLWELVTREVPFADLSNMEIGMKVALEGLRPTIPPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQD  270 (271)
T ss_dssp             HHHHHHHCSCTTTTSCHHHHHHHHHHSCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHCC
T ss_pred             HHHHHHhCCCCccccChHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence            99999999999988877776666666666777788899999999999999999999999999999998864

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=99.97  E-value=6.1e-33  Score=187.72  Aligned_cols=133  Identities=15%  Similarity=0.121  Sum_probs=98.2

Q ss_pred             hhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc-------------------CCcccCCcccCccccccC
Q psy12581          6 IVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ-------------------RGRCYYPAWMSPEALQKK   66 (153)
Q Consensus         6 ~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~-------------------~~~~~~~~~~~pe~~~~~   66 (153)
                      .-++.|||+++|+|+||++.||+++.++.+||.  |||++...                   .+.+||+.|||||++.+.
T Consensus       128 ~~al~ylH~~~IiHRDlKp~NILl~~~~~vKl~--DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~  205 (299)
T 4g31_A          128 AEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVG--DFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGN  205 (299)
T ss_dssp             HHHHHHHHHTTCCCCCCCGGGEEECTTCCEEEC--CCCCC--------------------------CCCTTSCHHHHTTC
T ss_pred             HHHHHHHHHCcCccccCcHHHeEECCCCcEEEc--cCccceecCCCccccccccccccccccCCcccCccccCHHHHcCC
Confidence            447899999999999999999999999999988  99998432                   224799999999999875


Q ss_pred             CCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581         67 PGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus        67 ~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                         .++.++|+||+|+++||+++   ||.+................++.+...++...+++.+||+.||++|||+.++++
T Consensus       206 ---~y~~~~DiwSlGvilyell~---Pf~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~  279 (299)
T 4g31_A          206 ---SYSHKVDIFSLGLILFELLY---PFSTQMERVRTLTDVRNLKFPPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIE  279 (299)
T ss_dssp             ---CCCTHHHHHHHHHHHHHHHS---CCSSHHHHHHHHHHHHTTCCCHHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             ---CCCCHHHHHHHHHHHHHHcc---CCCCccHHHHHHHHHhcCCCCCCCcccCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence               45589999999999999995   665432211111111121112122234567889999999999999999999986

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=99.97  E-value=6.8e-31  Score=178.74  Aligned_cols=143  Identities=28%  Similarity=0.506  Sum_probs=116.8

Q ss_pred             hhhHHhhhhcCC--CCCCCeeeeeeeeccccchhhccccccccccc-------CCcccCCcccCccccccCCCCCCcchh
Q psy12581          5 KIVYSFYLNSKK--SKTSNAFLFCCQIDEDLTARINMADAQFSFQQ-------RGRCYYPAWMSPEALQKKPGDRNLEAC   75 (153)
Q Consensus         5 ~~~~~~~lh~~~--i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~-------~~~~~~~~~~~pe~~~~~~~~~~~~~~   75 (153)
                      ..-++.|||+++  +.|+||++.||+++.++.+|+.  |||++...       ....|++.|++||.+.+.   ..+.++
T Consensus       146 i~~aL~~LH~~~~~ivH~Dikp~NIll~~~~~~kL~--Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~  220 (309)
T 3p86_A          146 VAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVC--DFGLSRLKASTFLSSKSAAGTPEWMAPEVLRDE---PSNEKS  220 (309)
T ss_dssp             HHHHHHHHHTSSSCCCCTTCCGGGEEECTTCCEEEC--CCC-----------------CCTTSCHHHHTTC---CCCTTH
T ss_pred             HHHHHHHHHcCCCCEECCCCChhhEEEeCCCcEEEC--CCCCCccccccccccccCCCCccccChhhhcCC---CCCchh
Confidence            345789999999  9999999999999999988888  99988422       234789999999998864   345889


Q ss_pred             hHHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHhhhh
Q psy12581         76 DMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKMK  152 (153)
Q Consensus        76 dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~~~~  152 (153)
                      |+||+|+++|++++|..||.+.........+.........+...++.+.+++.+||+.+|++|||+.++++.|+.+.
T Consensus       221 DiwslG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~  297 (309)
T 3p86_A          221 DVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLI  297 (309)
T ss_dssp             HHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHHSCCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence            99999999999999999998887766655554455566778889999999999999999999999999999998774

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=99.97  E-value=4.4e-31  Score=182.75  Aligned_cols=137  Identities=17%  Similarity=0.171  Sum_probs=103.1

Q ss_pred             hhHHhhhhcCCCCCCCeeeeeeeeccc-cchhhccccccccccc-----------------------------------C
Q psy12581          6 IVYSFYLNSKKSKTSNAFLFCCQIDED-LTARINMADAQFSFQQ-----------------------------------R   49 (153)
Q Consensus         6 ~~~~~~lh~~~i~~~ni~~~~~~~~~~-~~~kl~~~d~g~~~~~-----------------------------------~   49 (153)
                      .-++.|||+++|.|+||++.||+++.+ +.+|+.  |||++...                                   .
T Consensus       127 l~al~ylH~~gIiHRDiKPeNiLl~~~~~~~kl~--DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  204 (361)
T 4f9c_A          127 FKALKRIHQFGIVHRDVKPSNFLYNRRLKKYALV--DFGLAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVA  204 (361)
T ss_dssp             HHHHHHHHHTTEECSCCSGGGEEEETTTTEEEEC--CCTTCEECTTCSCGGGGGC-------------------------
T ss_pred             HHHHHHHHHCCeEeCcCCHHHeEEeCCCCeEEEC--cCCCCcccCCcccccccccccccccccccccccccccccccccc
Confidence            457899999999999999999999876 778888  99998421                                   2


Q ss_pred             CcccCCcccCccccccCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCc-hhhhHHHHhh-------------------
Q psy12581         50 GRCYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTP-MEVGMKVALE-------------------  109 (153)
Q Consensus        50 ~~~~~~~~~~pe~~~~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~-~~~~~~~~~~-------------------  109 (153)
                      ..+||+.|+|||++.+.+  .++.++|+||+||++|++++|+.||..... ......+...                   
T Consensus       205 ~~~GT~~Y~APE~l~~~~--~y~~~~DiWSlG~il~ell~G~~Pf~~~~~~~~~l~~I~~~~G~~~~~~~~~~~~~~~~~  282 (361)
T 4f9c_A          205 PRAGTPGFRAPEVLTKCP--NQTTAIDMWSAGVIFLSLLSGRYPFYKASDDLTALAQIMTIRGSRETIQAAKTFGKSILC  282 (361)
T ss_dssp             -CCCCGGGCCHHHHTTCS--CCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTEEEEE
T ss_pred             ccccCccccCHHHHcCCC--CCCCccchhhhHHHHHHHHHCCCCCCCCCCHHHHHHHHHHhcCCccchhhhhhccccccc
Confidence            237999999999987643  345889999999999999999999965432 2222221100                   


Q ss_pred             -----------------c----------------cccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581        110 -----------------G----------------LRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus       110 -----------------~----------------~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                                       .                .........++++.+|+.+||+.||++|+|++|+++
T Consensus       283 ~~~~p~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~is~~a~DLl~~lL~~dP~~R~ta~eaL~  352 (361)
T 4f9c_A          283 SKEVPAQDLRKLCERLRGMDSSTPKLTSDIQGHATNLEGWNEVPDEAYDLLDKLLDLNPASRITAEEALL  352 (361)
T ss_dssp             SSCCCCCCHHHHHHHHC----------------------CTTCCHHHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred             cccCcchhhhHHHHhhccccccccccccccccccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence                             0                000112346789999999999999999999999985

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=99.97  E-value=5.7e-31  Score=192.45  Aligned_cols=135  Identities=19%  Similarity=0.215  Sum_probs=109.9

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc-----CCcccCCcccCccccccCCCCCCcchhhHHH
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ-----RGRCYYPAWMSPEALQKKPGDRNLEACDMWS   79 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~-----~~~~~~~~~~~pe~~~~~~~~~~~~~~dv~s   79 (153)
                      ...++.|||+++|+|+||++.||+++.+|.+||.  |||++...     .+.+||+.|||||++...  ..++.++|+||
T Consensus       301 Il~aL~yLH~~gIiHRDLKPeNILld~~G~vKL~--DFGlA~~~~~~~~~t~~GTp~YmAPEvl~~~--~~y~~~vDiWS  376 (689)
T 3v5w_A          301 IILGLEHMHNRFVVYRDLKPANILLDEHGHVRIS--DLGLACDFSKKKPHASVGTHGYMAPEVLQKG--VAYDSSADWFS  376 (689)
T ss_dssp             HHHHHHHHHTTTEECCCCSGGGEEECTTSCEEEC--CCTTCEECSSCCCCSCCSCGGGCCHHHHSTT--CCCCTHHHHHH
T ss_pred             HHHHHHHHHHCCccccCCchHHeEEeCCCCEEec--ccceeeecCCCCCCCccCCcCccCHHHHhCC--CCCCcHHHHHH
Confidence            4568899999999999999999999999999999  99998432     356899999999998642  13458999999


Q ss_pred             HHHHHHHHHhCCCCCCCCCchh---hhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCC-----HHHHH
Q psy12581         80 FAVLLWELATREVPFADLTPME---VGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPT-----FDMVL  145 (153)
Q Consensus        80 ~g~~~~~~~~g~~p~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps-----~~~~l  145 (153)
                      +||++|+|++|..||.+.....   ....+..  .....|..+++++.+++.+||+.||++|++     +++++
T Consensus       377 LGvilYEmLtG~~PF~~~~~~~~~~i~~~i~~--~~~~~p~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~  448 (689)
T 3v5w_A          377 LGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLT--MAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVK  448 (689)
T ss_dssp             HHHHHHHHHHSSCTTCGGGCCCHHHHHHHHHH--CCCCCCTTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHT
T ss_pred             HHHHHHHHHhCCCCCCCCChHHHHHHHHhhcC--CCCCCCccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHh
Confidence            9999999999999997643322   2222222  245567889999999999999999999997     57765

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=99.97  E-value=3.2e-30  Score=178.29  Aligned_cols=143  Identities=22%  Similarity=0.344  Sum_probs=121.5

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc---------CCcccCCcccCccccccCCCCCCcchh
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ---------RGRCYYPAWMSPEALQKKPGDRNLEAC   75 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~---------~~~~~~~~~~~pe~~~~~~~~~~~~~~   75 (153)
                      ..-++.|||++++.|+||++.||+++.++.+||.  |||++...         ....+|+.|++||.+.+.   .++.++
T Consensus       202 l~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kl~--Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~---~~~~~~  276 (359)
T 3vhe_A          202 VAKGMEFLASRKCIHRDLAARNILLSEKNVVKIC--DFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDR---VYTIQS  276 (359)
T ss_dssp             HHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEEC--CCGGGSCTTSCTTCEEC--CEECGGGCCHHHHHHC---CCCHHH
T ss_pred             HHHHHHHHHHCCcccCCCChhhEEEcCCCcEEEE--eccceeeecccccchhccccCCCceeEChhhhcCC---CCCchh
Confidence            3457899999999999999999999999988888  99998432         233567889999998764   455899


Q ss_pred             hHHHHHHHHHHHHh-CCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHhhhh
Q psy12581         76 DMWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKMK  152 (153)
Q Consensus        76 dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~~~~  152 (153)
                      |+||+|+++|++++ |..||.+...................+...++.+.+++.+||+.||++|||+.++++.|+.+.
T Consensus       277 Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~  354 (359)
T 3vhe_A          277 DVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL  354 (359)
T ss_dssp             HHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             hhhhHHHHHHHHHhcCCCCCCccchhHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHH
Confidence            99999999999998 999998877666665666666667778889999999999999999999999999999998874

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=99.97  E-value=3.7e-30  Score=178.96  Aligned_cols=142  Identities=27%  Similarity=0.420  Sum_probs=119.1

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc---------CCcccCCcccCccccccCCCCCCcchh
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ---------RGRCYYPAWMSPEALQKKPGDRNLEAC   75 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~---------~~~~~~~~~~~pe~~~~~~~~~~~~~~   75 (153)
                      ..-++.|||++++.|+||++.||+++.++.+||.  |||++...         ....+++.|++||.+.+.   .++.++
T Consensus       212 i~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~--DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~---~~~~~~  286 (370)
T 2psq_A          212 LARGMEYLASQKCIHRDLAARNVLVTENNVMKIA--DFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDR---VYTHQS  286 (370)
T ss_dssp             HHHHHHHHHHTTEECSCCCGGGEEECTTCCEEEC--CCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTC---CCCHHH
T ss_pred             HHHHHHHHHhCCeeccccchhhEEECCCCCEEEc--cccCCcccCcccceecccCCCcccceECHhHhcCC---CCCcHH
Confidence            4457899999999999999999999999998888  99998432         223456789999998764   456899


Q ss_pred             hHHHHHHHHHHHHh-CCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHhhhh
Q psy12581         76 DMWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKMK  152 (153)
Q Consensus        76 dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~~~~  152 (153)
                      |+||+|+++|++++ |..||.+........ ....+.....|..++..+.+++.+||+.+|++||++.++++.|+++.
T Consensus       287 DvwslG~il~ellt~g~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il  363 (370)
T 2psq_A          287 DVWSFGVLMWEIFTLGGSPYPGIPVEELFK-LLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL  363 (370)
T ss_dssp             HHHHHHHHHHHHHTTSCCSSTTCCGGGHHH-HHHTTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHcCCCCCCCCCCHHHHHH-HHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence            99999999999999 999998876655543 34455566677889999999999999999999999999999999874

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=99.96  E-value=6.7e-30  Score=172.22  Aligned_cols=147  Identities=18%  Similarity=0.348  Sum_probs=113.2

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc---------CCcccCCcccCccccccCCCCCCcchh
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ---------RGRCYYPAWMSPEALQKKPGDRNLEAC   75 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~---------~~~~~~~~~~~pe~~~~~~~~~~~~~~   75 (153)
                      ..-++.|||++++.|+||.+.||+++.++.+++.  |||.+...         ....+++.|++||.+.......++.++
T Consensus       129 i~~~L~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~--Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~  206 (289)
T 3og7_A          129 TARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIG--DFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQS  206 (289)
T ss_dssp             HHHHHHHHHHTTCCCSCCCGGGEEEETTTEEEEC--CCC------------------CCCTTCCHHHHC----CCSCHHH
T ss_pred             HHHHHHHHHhCCcccccCccceEEECCCCCEEEc--cceeccccccccccccccccCCCccccCchhhcccCCCCCCccc
Confidence            3457899999999999999999999999988888  99987432         223678999999998744334566899


Q ss_pred             hHHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccC----CCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHhhh
Q psy12581         76 DMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRIT----IPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKM  151 (153)
Q Consensus        76 dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~~~  151 (153)
                      |+||+|++++++++|..||.+.................+    .+..++..+.+++.+||..+|++|||+.++++.|+++
T Consensus       207 Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l  286 (289)
T 3og7_A          207 DVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEEL  286 (289)
T ss_dssp             HHHHHHHHHHHHHHSSCTTSSCCCHHHHHHHHHHTSCCCCTTSSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHT
T ss_pred             chHHHHHHHHHHHHCCCCccccchHHHHHHHhcccccCcchhhccccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHH
Confidence            999999999999999999988766655544444332221    2346789999999999999999999999999999987


Q ss_pred             hC
Q psy12581        152 KR  153 (153)
Q Consensus       152 ~~  153 (153)
                      .+
T Consensus       287 ~~  288 (289)
T 3og7_A          287 AR  288 (289)
T ss_dssp             TC
T ss_pred             hh
Confidence            53

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=99.96  E-value=2.3e-30  Score=188.33  Aligned_cols=136  Identities=19%  Similarity=0.144  Sum_probs=113.4

Q ss_pred             hhHHhhhhcCCCCCCCeeeeeeeeccc--cchhhccccccccccc------CCcccCCcccCccccccCCCCCCcchhhH
Q psy12581          6 IVYSFYLNSKKSKTSNAFLFCCQIDED--LTARINMADAQFSFQQ------RGRCYYPAWMSPEALQKKPGDRNLEACDM   77 (153)
Q Consensus         6 ~~~~~~lh~~~i~~~ni~~~~~~~~~~--~~~kl~~~d~g~~~~~------~~~~~~~~~~~pe~~~~~~~~~~~~~~dv   77 (153)
                      .-++.|||+++|.|+||++.||+++.+  +.+||.  |||++...      ...+||+.|+|||++.+.+   ++.++|+
T Consensus       265 ~~al~ylH~~~iiHRDlKp~Nill~~~~~~~vKl~--DFG~a~~~~~~~~~~~~~GT~~y~APEv~~~~~---y~~~~Di  339 (573)
T 3uto_A          265 CKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLI--DFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKP---VGYYTDM  339 (573)
T ss_dssp             HHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEEC--CCSSCEECCTTSEEEEECSSGGGCCHHHHTTCC---BCHHHHH
T ss_pred             HHHHHHHHHCCeeeccCChhhccccCCCCCCEEEe--eccceeEccCCCceeeeEECccccCHHHhCCCC---CCcHHHH
Confidence            457899999999999999999999865  666776  99998543      2347999999999998753   4589999


Q ss_pred             HHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccC--CCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581         78 WSFAVLLWELATREVPFADLTPMEVGMKVALEGLRIT--IPPGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus        78 ~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      ||+|+++|+|++|..||.+.........+.......+  .+..++..+.+|+.+||+.||++|||+.++++
T Consensus       340 WSlGvilyeml~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~  410 (573)
T 3uto_A          340 WSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALE  410 (573)
T ss_dssp             HHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCSGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHHHHHCCCCCCCcCHHHHHHHHHhCCCCCCcccccCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            9999999999999999998887777766655433322  23568999999999999999999999999986

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=99.96  E-value=6.7e-30  Score=175.01  Aligned_cols=142  Identities=20%  Similarity=0.346  Sum_probs=117.8

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc---------CCcccCCcccCccccccCCCCCCcchh
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ---------RGRCYYPAWMSPEALQKKPGDRNLEAC   75 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~---------~~~~~~~~~~~pe~~~~~~~~~~~~~~   75 (153)
                      ..-++.|||++++.|+||++.||+++.++.+|+.  |||++...         ....+++.|++||.+.+.   .++.++
T Consensus       126 i~~~l~~LH~~~ivH~Dikp~NIll~~~~~~kl~--Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~---~~~~~~  200 (327)
T 3poz_A          126 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKIT--DFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR---IYTHQS  200 (327)
T ss_dssp             HHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEEC--CTTHHHHHTTTCC-------CCCGGGSCHHHHHHC---CCCHHH
T ss_pred             HHHHHHHHhhCCeeCCCCChheEEECCCCCEEEc--cCcceeEccCCcccccccCCCccccccChHHhccC---CCCchh
Confidence            4557899999999999999999999999988888  99998432         123456789999998864   455899


Q ss_pred             hHHHHHHHHHHHHh-CCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHhhhh
Q psy12581         76 DMWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKMK  152 (153)
Q Consensus        76 dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~~~~  152 (153)
                      |+||+|+++|++++ |..||.+....... .........+.+...+..+.+++.+||+.+|++||++.++++.|+++.
T Consensus       201 Di~slG~il~ellt~g~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~  277 (327)
T 3poz_A          201 DVWSYGVTVWELMTFGSKPYDGIPASEIS-SILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMA  277 (327)
T ss_dssp             HHHHHHHHHHHHHTTSCCTTTTCCGGGHH-HHHHTTCCCCCCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHH
T ss_pred             hhhhhHHHHHHHHhcCCCCccCCCHHHHH-HHHHcCCCCCCCccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHH
Confidence            99999999999999 99999877655543 344455566667789999999999999999999999999999998764

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=99.96  E-value=7.6e-30  Score=181.54  Aligned_cols=143  Identities=22%  Similarity=0.394  Sum_probs=120.7

Q ss_pred             chhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc--------CCcccCCcccCccccccCCCCCCcchh
Q psy12581          4 KKIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ--------RGRCYYPAWMSPEALQKKPGDRNLEAC   75 (153)
Q Consensus         4 ~~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~--------~~~~~~~~~~~pe~~~~~~~~~~~~~~   75 (153)
                      ...-++.|||++++.|+||++.||+++.++.+||.  |||++...        ....++..|+|||.+...   .++.++
T Consensus       292 qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~--DFG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~  366 (454)
T 1qcf_A          292 QIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIA--DFGLARVIEDNEYTAREGAKFPIKWTAPEAINFG---SFTIKS  366 (454)
T ss_dssp             HHHHHHHHHHHTTCCCSSCSGGGEEECTTCCEEEC--STTGGGGBCCHHHHTTCSSSSCGGGSCHHHHHHC---CCCHHH
T ss_pred             HHHHHHHHHHhCCccCCCCCHHHEEECCCCcEEEe--eCCCceEcCCCceeccCCCcccccccCHHHhccC---CCCcHH
Confidence            34567899999999999999999999999999988  99998532        223456789999998754   456899


Q ss_pred             hHHHHHHHHHHHHh-CCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHhhhh
Q psy12581         76 DMWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKMK  152 (153)
Q Consensus        76 dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~~~~  152 (153)
                      |+||+|+++||+++ |+.||.+....+....+ ..+...+.|..++..+.+++.+||..||++|||++++++.|+.+.
T Consensus       367 DvwslG~~l~el~t~g~~P~~~~~~~~~~~~i-~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~  443 (454)
T 1qcf_A          367 DVWSFGILLMEIVTYGRIPYPGMSNPEVIRAL-ERGYRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFY  443 (454)
T ss_dssp             HHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHH-HHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSS
T ss_pred             HHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHH-HcCCCCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHH
Confidence            99999999999999 99999887766655443 455666778889999999999999999999999999999999874

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=99.96  E-value=7.1e-30  Score=181.52  Aligned_cols=143  Identities=23%  Similarity=0.424  Sum_probs=120.4

Q ss_pred             chhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc----CCcccCCcccCccccccCCCCCCcchhhHHH
Q psy12581          4 KKIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ----RGRCYYPAWMSPEALQKKPGDRNLEACDMWS   79 (153)
Q Consensus         4 ~~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~----~~~~~~~~~~~pe~~~~~~~~~~~~~~dv~s   79 (153)
                      ...-++.|||++++.|+||.+.||+++.++.+||.  |||++...    ....++..|+|||.+.+.   .++.++|+||
T Consensus       297 qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~--DfG~a~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~sDvws  371 (450)
T 1k9a_A          297 DVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVS--DFGLTKEASSTQDTGKLPVKWTAPEALREK---KFSTKSDVWS  371 (450)
T ss_dssp             HHHHHHHHHHHTTEECSCCCGGGEEECTTSCEEEC--CCTTCEECC------CCCTTTSCHHHHHSS---CCCHHHHHHH
T ss_pred             HHHHHHHHHHhCCeeCCCCCHhhEEECCCCCEEEe--eCCCcccccccccCCCCCcceeCHHHhcCC---CCCcHHHHHH
Confidence            34557899999999999999999999999999988  99998433    223567889999999764   4568999999


Q ss_pred             HHHHHHHHHh-CCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHhhhh
Q psy12581         80 FAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKMK  152 (153)
Q Consensus        80 ~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~~~~  152 (153)
                      +|+++|++++ |..||.+......... +..+..++.|..+++.+.+++.+||..||++|||+.++++.|+.+.
T Consensus       372 lG~~l~el~t~g~~P~~~~~~~~~~~~-i~~~~~~~~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~  444 (450)
T 1k9a_A          372 FGILLWEIYSFGRVPYPRIPLKDVVPR-VEKGYKMDAPDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHIR  444 (450)
T ss_dssp             HHHHHHHHHTTTCCSSTTSCTTTHHHH-HHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhCCCCCCCCCCHHHHHHH-HHcCCCCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence            9999999998 9999988766655444 3455667778889999999999999999999999999999999875

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=99.96  E-value=1.7e-29  Score=169.93  Aligned_cols=144  Identities=26%  Similarity=0.389  Sum_probs=116.3

Q ss_pred             hhhHHhhhhcCC--CCCCCeeeeeeeeccccc-----hhhccccccccccc----CCcccCCcccCccccccCCCCCCcc
Q psy12581          5 KIVYSFYLNSKK--SKTSNAFLFCCQIDEDLT-----ARINMADAQFSFQQ----RGRCYYPAWMSPEALQKKPGDRNLE   73 (153)
Q Consensus         5 ~~~~~~~lh~~~--i~~~ni~~~~~~~~~~~~-----~kl~~~d~g~~~~~----~~~~~~~~~~~pe~~~~~~~~~~~~   73 (153)
                      ..-++.|||+++  +.|+||++.||+++.++.     +|+.  |||.+...    ....+++.|++||.+.... ..++.
T Consensus       131 l~~~l~~lH~~~~~ivH~dikp~Nil~~~~~~~~~~~~kl~--Dfg~~~~~~~~~~~~~g~~~y~aPE~~~~~~-~~~~~  207 (287)
T 4f0f_A          131 IALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVA--DFGLSQQSVHSVSGLLGNFQWMAPETIGAEE-ESYTE  207 (287)
T ss_dssp             HHHHHHHHHTSSSCCBCSCCSGGGEEESCCCTTCSCCEEEC--CCTTCBCCSSCEECCCCCCTTSCGGGSSCSS-CEECH
T ss_pred             HHHHHHHHHhCCCCeecCCCCcceEEEeccCCCCceeEEeC--CCCccccccccccccCCCccccCchhhccCC-CCcCc
Confidence            345789999999  999999999999987765     6666  99998533    2346889999999984321 23458


Q ss_pred             hhhHHHHHHHHHHHHhCCCCCCCCCchhh--hHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHhhh
Q psy12581         74 ACDMWSFAVLLWELATREVPFADLTPMEV--GMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKM  151 (153)
Q Consensus        74 ~~dv~s~g~~~~~~~~g~~p~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~~~  151 (153)
                      ++|+||+|+++|++++|..||........  .............+...++.+.+++.+||+.||++|||++++++.|+++
T Consensus       208 ~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l  287 (287)
T 4f0f_A          208 KADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL  287 (287)
T ss_dssp             HHHHHHHHHHHHHHHHSSCTTTTCCCCHHHHHHHHHHSCCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred             hhhHHHHHHHHHHHHcCCCCCccccccHHHHHHHHhccCCCCCCCcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence            89999999999999999999987654443  2333444556667788999999999999999999999999999999875

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=99.96  E-value=1.4e-29  Score=173.60  Aligned_cols=135  Identities=24%  Similarity=0.358  Sum_probs=114.1

Q ss_pred             hhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc------CCcccCCcccCccccccCCCCCCcchhhHHH
Q psy12581          6 IVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ------RGRCYYPAWMSPEALQKKPGDRNLEACDMWS   79 (153)
Q Consensus         6 ~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~------~~~~~~~~~~~pe~~~~~~~~~~~~~~dv~s   79 (153)
                      .-++.|||++++.|+||++.||+++.++.+|+.  |||++...      ...+|++.|+|||.+.+...  .+.++|+||
T Consensus       124 ~~al~~lH~~~ivHrDlkp~NIll~~~~~~kl~--DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~--~~~~~Diws  199 (328)
T 3fe3_A          124 VSAVQYCHQKRIVHRDLKAENLLLDADMNIKIA--DFGFSNEFTVGGKLDAFCGAPPYAAPELFQGKKY--DGPEVDVWS  199 (328)
T ss_dssp             HHHHHHHHHTTCCCSCCCGGGEEECTTSCEEEC--STTCCGGGSSSCGGGTTSSSGGGCCHHHHHTCCC--CSHHHHHHH
T ss_pred             HHHHHHHHHCCEeccCCCHHHEEEcCCCCEEEe--eccCceecCCCCccccccCCcceeCcccccCCCc--CCchhhhhh
Confidence            457899999999999999999999999999988  99988432      34578999999999886432  247899999


Q ss_pred             HHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581         80 FAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus        80 ~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      +|++++++++|..||.+.........+...  ....|...++.+.+++.+||+.||++|||++++++
T Consensus       200 lG~il~ell~g~~pf~~~~~~~~~~~i~~~--~~~~p~~~s~~~~~li~~~L~~dP~~R~t~~eil~  264 (328)
T 3fe3_A          200 LGVILYTLVSGSLPFDGQNLKELRERVLRG--KYRIPFYMSTDCENLLKRFLVLNPIKRGTLEQIMK  264 (328)
T ss_dssp             HHHHHHHHHHSSCSSCCSSHHHHHHHHHHC--CCCCCTTSCHHHHHHHHHHCCSSTTTSCCHHHHTT
T ss_pred             hHHHHHHHHhCCCCCCCCCHHHHHHHHHhC--CCCCCCCCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence            999999999999999888776666555544  34457778999999999999999999999999875

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=99.96  E-value=3.1e-30  Score=179.74  Aligned_cols=143  Identities=26%  Similarity=0.451  Sum_probs=118.9

Q ss_pred             chhhHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccccCC---------cccCCcccCccccccCCCCCCcch
Q psy12581          4 KKIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQRG---------RCYYPAWMSPEALQKKPGDRNLEA   74 (153)
Q Consensus         4 ~~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~~---------~~~~~~~~~pe~~~~~~~~~~~~~   74 (153)
                      ...-++.|||++++.|+||.+.||+++.++.+||.  |||++.....         ..++..|+|||.+.+.   .++.+
T Consensus       221 qi~~~l~~LH~~~ivHrDlkp~Nil~~~~~~~kl~--DfG~s~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~  295 (377)
T 3cbl_A          221 DAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKIS--DFGMSREEADGVYAASGGLRQVPVKWTAPEALNYG---RYSSE  295 (377)
T ss_dssp             HHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEEC--CGGGCEECTTSEEECCSSCCEEEGGGSCHHHHHHC---EEEHH
T ss_pred             HHHHHHHHHHHCCcCCcccCHHHEEEcCCCcEEEC--cCCCceecCCCceeecCCCCCCCcCcCCHhHhccC---CCCch
Confidence            34557899999999999999999999999998888  9999843221         1345679999998753   45689


Q ss_pred             hhHHHHHHHHHHHHh-CCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHhhhh
Q psy12581         75 CDMWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKMK  152 (153)
Q Consensus        75 ~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~~~~  152 (153)
                      +|+||+|+++||+++ |..||.+........ .+..+...+.|..++..+.+++.+||+.||++|||++++++.|++++
T Consensus       296 ~DvwslG~il~el~t~g~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~  373 (377)
T 3cbl_A          296 SDVWSFGILLWETFSLGASPYPNLSNQQTRE-FVEKGGRLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIR  373 (377)
T ss_dssp             HHHHHHHHHHHHHHTTSCCSSTTSCHHHHHH-HHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHhCCCCCCCCCCHHHHHH-HHHcCCCCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHH
Confidence            999999999999998 999998876655443 34455566778889999999999999999999999999999999875

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=99.96  E-value=1.9e-29  Score=172.83  Aligned_cols=142  Identities=21%  Similarity=0.358  Sum_probs=116.1

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc---------CCcccCCcccCccccccCCCCCCcchh
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ---------RGRCYYPAWMSPEALQKKPGDRNLEAC   75 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~---------~~~~~~~~~~~pe~~~~~~~~~~~~~~   75 (153)
                      ..-++.|||++++.|+||++.||+++.++.+||.  |||++...         ....+++.|++||.+.+.   .++.++
T Consensus       126 i~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kL~--DfG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~---~~~~~~  200 (327)
T 3lzb_A          126 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKIT--DFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR---IYTHQS  200 (327)
T ss_dssp             HHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEEC--CTTC----------------CCCGGGSCHHHHHHC---CCCHHH
T ss_pred             HHHHHHHHhhCCCcCCCCCHHHEEEcCCCCEEEc--cCcceeEccCccccccccCCCccccccCHHHHcCC---CCChHH
Confidence            3457899999999999999999999999988888  99998432         122456789999998864   455899


Q ss_pred             hHHHHHHHHHHHHh-CCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHhhhh
Q psy12581         76 DMWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKMK  152 (153)
Q Consensus        76 dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~~~~  152 (153)
                      |+||+|+++|++++ |..||.+........ ........+.+...+..+.+++.+||..||++||++.++++.|+++.
T Consensus       201 Di~slG~il~ell~~g~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~  277 (327)
T 3lzb_A          201 DVWSYGVTVWELMTFGSKPYDGIPASEISS-ILEKGERLPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMA  277 (327)
T ss_dssp             HHHHHHHHHHHHHTTSCCTTTTCCGGGHHH-HHHTTCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHCCCCCCCCCCHHHHHH-HHHcCCCCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence            99999999999999 999998876655543 34455566677789999999999999999999999999999998874

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=99.96  E-value=6.1e-30  Score=176.09  Aligned_cols=143  Identities=19%  Similarity=0.278  Sum_probs=121.1

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc---------CCcccCCcccCccccccCCCCCCcchh
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ---------RGRCYYPAWMSPEALQKKPGDRNLEAC   75 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~---------~~~~~~~~~~~pe~~~~~~~~~~~~~~   75 (153)
                      ..-++.|||++++.|+||.+.||+++.++.+||.  |||.+...         ....+++.|++||.+.+.   .++.++
T Consensus       181 i~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kL~--Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~---~~~~~~  255 (344)
T 1rjb_A          181 VAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKIC--DFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEG---IYTIKS  255 (344)
T ss_dssp             HHHHHHHHHHTTEEETTCSGGGEEEETTTEEEEC--CCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHC---CCCHHH
T ss_pred             HHHHHHHHHhCCcccCCCChhhEEEcCCCcEEeC--CCccCcccccCccceeccCccCccCccCHHHhccC---CCChhH
Confidence            3457899999999999999999999999988888  99998432         223566789999998764   455899


Q ss_pred             hHHHHHHHHHHHHh-CCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHhhhh
Q psy12581         76 DMWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKMK  152 (153)
Q Consensus        76 dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~~~~  152 (153)
                      |+||+|++++++++ |..||.+...................+...+..+.+++.+||..||++|||+.++++.|+.+.
T Consensus       256 Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~  333 (344)
T 1rjb_A          256 DVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQL  333 (344)
T ss_dssp             HHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC
T ss_pred             hHHHHHHHHHHHHcCCCCCcccCCcHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHH
Confidence            99999999999998 999998877666666666666666777888999999999999999999999999999998764

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=99.96  E-value=2.6e-29  Score=170.78  Aligned_cols=142  Identities=22%  Similarity=0.387  Sum_probs=119.7

Q ss_pred             hhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc---------CCcccCCcccCccccccCCCCCCcchhh
Q psy12581          6 IVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ---------RGRCYYPAWMSPEALQKKPGDRNLEACD   76 (153)
Q Consensus         6 ~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~---------~~~~~~~~~~~pe~~~~~~~~~~~~~~d   76 (153)
                      .-++.|||++++.|+||.+.||+++.++.+|+.  |||.+...         ....+++.|++||.+.+.   .++.++|
T Consensus       155 ~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~--Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~D  229 (313)
T 1t46_A          155 AKGMAFLASKNCIHRDLAARNILLTHGRITKIC--DFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNC---VYTFESD  229 (313)
T ss_dssp             HHHHHHHHHTTCCCSCCSGGGEEEETTTEEEEC--CCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHC---CCCHHHH
T ss_pred             HHHHHHHHHCCeecCCCccceEEEcCCCCEEEc--cccccccccccccceeccCCCCcceeeChHHhcCC---CCChHHH
Confidence            457899999999999999999999999988888  99998432         123456789999998764   4558999


Q ss_pred             HHHHHHHHHHHHh-CCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHhhhh
Q psy12581         77 MWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKMK  152 (153)
Q Consensus        77 v~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~~~~  152 (153)
                      +||+|++++++++ |..||.+...................+...+..+.+++.+||..||++|||+.++++.|+++.
T Consensus       230 i~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~  306 (313)
T 1t46_A          230 VWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQI  306 (313)
T ss_dssp             HHHHHHHHHHHHTTTCCSSTTCCSSHHHHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhCCCCCCCcccchhHHHHHhccCCCCCCcccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHH
Confidence            9999999999998 999998877666555556566566667788999999999999999999999999999998763

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=99.96  E-value=1e-29  Score=175.47  Aligned_cols=140  Identities=19%  Similarity=0.252  Sum_probs=115.2

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc---CCcccCCcccCccccccCCCCCCcchhhHHHHH
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ---RGRCYYPAWMSPEALQKKPGDRNLEACDMWSFA   81 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~---~~~~~~~~~~~pe~~~~~~~~~~~~~~dv~s~g   81 (153)
                      ..-++.|||++++.|+||++.||+++.++.+||.  |||++...   ....|++.|+|||.+.......++.++|+||+|
T Consensus       163 i~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~--DfG~a~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG  240 (348)
T 1u5q_A          163 ALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLG--DFGSASIMAPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLG  240 (348)
T ss_dssp             HHHHHHHHHHTTCBCCCCSGGGEEEETTTEEEEC--CCTTCBSSSSBCCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHH
T ss_pred             HHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEe--eccCceecCCCCcccCCcceeCHhhhccccCCCCCcHHHHHHHH
Confidence            3457899999999999999999999999988888  99998433   345789999999998643334566899999999


Q ss_pred             HHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581         82 VLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus        82 ~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      ++++++++|..||.+.........+.........+..++..+.+++.+||+.||++|||++++++
T Consensus       241 ~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~  305 (348)
T 1u5q_A          241 ITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLK  305 (348)
T ss_dssp             HHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             HHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHhh
Confidence            99999999999998877666655555444333345568999999999999999999999999875

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=99.96  E-value=1.3e-29  Score=169.14  Aligned_cols=142  Identities=29%  Similarity=0.450  Sum_probs=115.0

Q ss_pred             hhhHHhhhhcCC---CCCCCeeeeeeeecc--------ccchhhccccccccccc-----CCcccCCcccCccccccCCC
Q psy12581          5 KIVYSFYLNSKK---SKTSNAFLFCCQIDE--------DLTARINMADAQFSFQQ-----RGRCYYPAWMSPEALQKKPG   68 (153)
Q Consensus         5 ~~~~~~~lh~~~---i~~~ni~~~~~~~~~--------~~~~kl~~~d~g~~~~~-----~~~~~~~~~~~pe~~~~~~~   68 (153)
                      ..-++.|||+++   +.|+||.+.||+++.        ++.+++.  |||.+...     ....+++.|++||.+.+.  
T Consensus       114 l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~--Dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~--  189 (271)
T 3dtc_A          114 IARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKIT--DFGLAREWHRTTKMSAAGAYAWMAPEVIRAS--  189 (271)
T ss_dssp             HHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEEC--CCCC-------------CCGGGSCHHHHHHC--
T ss_pred             HHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEc--cCCcccccccccccCCCCccceeCHHHhccC--
Confidence            345789999999   889999999999986        5566777  99998432     234688999999998764  


Q ss_pred             CCCcchhhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHH
Q psy12581         69 DRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPIL  148 (153)
Q Consensus        69 ~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L  148 (153)
                       .++.++|+||+|++++++++|+.||.+.................+.+...+..+.+++.+||..+|++|||+.++++.|
T Consensus       190 -~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L  268 (271)
T 3dtc_A          190 -MFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKLALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQL  268 (271)
T ss_dssp             -CCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHTSCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred             -CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHhhhcCCCCCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHHHHH
Confidence             3558999999999999999999999887766666655555556667788899999999999999999999999999999


Q ss_pred             hhh
Q psy12581        149 DKM  151 (153)
Q Consensus       149 ~~~  151 (153)
                      +++
T Consensus       269 ~~l  271 (271)
T 3dtc_A          269 TTI  271 (271)
T ss_dssp             HC-
T ss_pred             hcC
Confidence            865

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=99.96  E-value=1.9e-29  Score=170.60  Aligned_cols=140  Identities=24%  Similarity=0.266  Sum_probs=112.8

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc-------CCcccCCcccCccccccCCCCCCcchhhH
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ-------RGRCYYPAWMSPEALQKKPGDRNLEACDM   77 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~-------~~~~~~~~~~~pe~~~~~~~~~~~~~~dv   77 (153)
                      ..-++.|||++++.|+||++.||+++.++.+|+.  |||++...       ....+++.|++||.+.+......+.++|+
T Consensus       146 i~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~kl~--Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di  223 (298)
T 2zv2_A          146 LIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIA--DFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDV  223 (298)
T ss_dssp             HHHHHHHHHHTTEECCCCCGGGEEECTTSCEEEC--CCTTCEECSSSSCEECCCCSCGGGCCGGGCCTTCCCEESHHHHH
T ss_pred             HHHHHHHHHHCCeeccCCCHHHEEECCCCCEEEe--cCCCccccccccccccCCcCCccccChhhhccCCCCCCCchhhh
Confidence            3457899999999999999999999999988888  99998432       23478999999999876432123578999


Q ss_pred             HHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581         78 WSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus        78 ~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      ||+|+++|++++|..||.+.........+.......+.....+..+.+++.+||+.||++|||+.++++
T Consensus       224 ~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~  292 (298)
T 2zv2_A          224 WAMGVTLYCFVFGQCPFMDERIMCLHSKIKSQALEFPDQPDIAEDLKDLITRMLDKNPESRIVVPEIKL  292 (298)
T ss_dssp             HHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred             HhHHHHHHHHHHCCCCCCCccHHHHHHHHhcccCCCCCccccCHHHHHHHHHHhhcChhhCCCHHHHhc
Confidence            999999999999999998776555444444443344444568899999999999999999999999874

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=99.96  E-value=2.7e-29  Score=170.90  Aligned_cols=143  Identities=22%  Similarity=0.344  Sum_probs=119.8

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc---------CCcccCCcccCccccccCCCCCCcchh
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ---------RGRCYYPAWMSPEALQKKPGDRNLEAC   75 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~---------~~~~~~~~~~~pe~~~~~~~~~~~~~~   75 (153)
                      ..-++.|||++++.|+||.+.||+++.++.+|+.  |||.+...         ....+++.|++||.+.+.   .++.++
T Consensus       157 i~~al~~lH~~~i~H~dikp~Nil~~~~~~~kl~--Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~---~~~~~~  231 (316)
T 2xir_A          157 VAKGMEFLASRKCIHRDLAARNILLSEKNVVKIC--DFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDR---VYTIQS  231 (316)
T ss_dssp             HHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEEC--CCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHC---CCCHHH
T ss_pred             HHHHHHHHHhCCcccccCccceEEECCCCCEEEC--CCccccccccCccceeccCCCcceeecCchhhccc---cccchh
Confidence            3457899999999999999999999999988888  99998432         223567789999998764   355899


Q ss_pred             hHHHHHHHHHHHHh-CCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHhhhh
Q psy12581         76 DMWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKMK  152 (153)
Q Consensus        76 dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~~~~  152 (153)
                      |+||+|++++++++ |..||.+.............+.....+...++.+.+++.+||..||++|||+.++++.|+.+.
T Consensus       232 Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~  309 (316)
T 2xir_A          232 DVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL  309 (316)
T ss_dssp             HHHHHHHHHHHHHTTSCCSSTTCCCSHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCCCCCCcccchhHHHHHHhccCccCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence            99999999999998 999998876555555555555566667778999999999999999999999999999998874

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=99.96  E-value=1.3e-29  Score=173.70  Aligned_cols=143  Identities=20%  Similarity=0.347  Sum_probs=120.3

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc---------CCcccCCcccCccccccCCCCCCcchh
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ---------RGRCYYPAWMSPEALQKKPGDRNLEAC   75 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~---------~~~~~~~~~~~pe~~~~~~~~~~~~~~   75 (153)
                      ..-++.|||++++.|+||.+.||+++.++.+|+.  |||++...         ....+++.|++||.+.+.   .++.++
T Consensus       173 i~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~--Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~  247 (333)
T 2i1m_A          173 VAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIG--DFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDC---VYTVQS  247 (333)
T ss_dssp             HHHHHHHHHHTTEECSCCSGGGCEEEGGGEEEBC--CCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHC---CCCHHH
T ss_pred             HHHHHHHHhcCCcccCCcccceEEECCCCeEEEC--ccccccccccccceeecCCCCCCccccCHHHhccC---CCChHH
Confidence            3457899999999999999999999999988888  99998432         223456789999998764   355899


Q ss_pred             hHHHHHHHHHHHHh-CCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHhhhh
Q psy12581         76 DMWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKMK  152 (153)
Q Consensus        76 dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~~~~  152 (153)
                      |+||+|++++++++ |..||.+...................+...+..+.+++.+||+.||++|||+.++++.|+++.
T Consensus       248 Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~  325 (333)
T 2i1m_A          248 DVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQA  325 (333)
T ss_dssp             HHHHHHHHHHHHTTTSCCSSTTCCSSHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHcCCCCCCcccchhHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHHH
Confidence            99999999999998 999998877666656666666666667778999999999999999999999999999998763

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=99.96  E-value=2.9e-29  Score=168.45  Aligned_cols=142  Identities=24%  Similarity=0.406  Sum_probs=111.5

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc--------CCcccCCcccCccccccCCCCCCcchhh
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ--------RGRCYYPAWMSPEALQKKPGDRNLEACD   76 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~--------~~~~~~~~~~~pe~~~~~~~~~~~~~~d   76 (153)
                      ..-++.|||++++.|+||++.||+++.++.+|+.  |||++...        ....+++.|++||.+.+.   .++.++|
T Consensus       125 i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~--Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~D  199 (281)
T 1mp8_A          125 LSTALAYLESKRFVHRDIAARNVLVSSNDCVKLG--DFGLSRYMEDSTYYKASKGKLPIKWMAPESINFR---RFTSASD  199 (281)
T ss_dssp             HHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEEC--C-------------------CCGGGCCHHHHHHC---CCSHHHH
T ss_pred             HHHHHHHHHhCCeecccccHHHEEECCCCCEEEC--ccccccccCcccccccccCCCcccccChhhcccC---CCCCccC
Confidence            3457899999999999999999999999988888  99988432        123456789999998754   4558999


Q ss_pred             HHHHHHHHHHHHh-CCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHhhhh
Q psy12581         77 MWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKMK  152 (153)
Q Consensus        77 v~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~~~~  152 (153)
                      +||+|++++++++ |..||.+.........+. .....+.+...+..+.+++.+||..||++|||+.++++.|+++.
T Consensus       200 i~slG~~l~ell~~g~~pf~~~~~~~~~~~i~-~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~  275 (281)
T 1mp8_A          200 VWMFGVCMWEILMHGVKPFQGVKNNDVIGRIE-NGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTIL  275 (281)
T ss_dssp             HHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHH-TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             chHHHHHHHHHHhcCCCCCCcCCHHHHHHHHH-cCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence            9999999999996 999998877666554443 34455667788999999999999999999999999999998874

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=99.96  E-value=1.4e-29  Score=171.31  Aligned_cols=137  Identities=20%  Similarity=0.326  Sum_probs=113.4

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc-------CCcccCCcccCccccccCCCCCCcchhhH
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ-------RGRCYYPAWMSPEALQKKPGDRNLEACDM   77 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~-------~~~~~~~~~~~pe~~~~~~~~~~~~~~dv   77 (153)
                      ..-++.|||++++.|+||++.||+++.++.+|+.  |||++...       ....|++.|++||.+.+.   .++.++|+
T Consensus       125 i~~~l~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~--Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~Di  199 (297)
T 3fxz_A          125 CLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLT--DFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRK---AYGPKVDI  199 (297)
T ss_dssp             HHHHHHHHHHTTEECCCCSGGGEEECTTCCEEEC--CCTTCEECCSTTCCBCCCCSCGGGCCHHHHHCS---CBCTHHHH
T ss_pred             HHHHHHHHHhCCceeCCCCHHHEEECCCCCEEEe--eCCCceecCCcccccCCccCCcCccChhhhcCC---CCCcHHHH
Confidence            3457899999999999999999999999988888  99987432       234789999999998764   34589999


Q ss_pred             HHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhcc-ccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581         78 WSFAVLLWELATREVPFADLTPMEVGMKVALEGL-RITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus        78 ~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      ||+|+++|++++|..||.+.........+..... ....+...+..+.+++.+||+.||++|||++++++
T Consensus       200 wslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~  269 (297)
T 3fxz_A          200 WSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQ  269 (297)
T ss_dssp             HHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHHCSCCCSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCCccccCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence            9999999999999999988776665554443322 34456678999999999999999999999999975

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.96  E-value=3.6e-29  Score=167.04  Aligned_cols=141  Identities=25%  Similarity=0.468  Sum_probs=117.8

Q ss_pred             hhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc--------CCcccCCcccCccccccCCCCCCcchhhH
Q psy12581          6 IVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ--------RGRCYYPAWMSPEALQKKPGDRNLEACDM   77 (153)
Q Consensus         6 ~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~--------~~~~~~~~~~~pe~~~~~~~~~~~~~~dv   77 (153)
                      .-++.|||++++.|+||.+.||+++.++.+++.  |||.+...        ....+++.|++||.+.+.   .++.++|+
T Consensus       116 ~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~--Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di  190 (269)
T 4hcu_A          116 CEGMAYLEEACVIHRDLAARNCLVGENQVIKVS--DFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFS---RYSSKSDV  190 (269)
T ss_dssp             HHHHHHHHHTTCCCSCCCGGGEEECGGGCEEEC--CTTGGGGBCCHHHHSTTSTTCCGGGCCHHHHHHC---CCCHHHHH
T ss_pred             HHHHHHHHhCCeecCCcchheEEEcCCCCEEec--cccccccccccccccccCcccccccCCHHHhcCC---CCCchhhh
Confidence            457899999999999999999999999988888  99998432        233556789999998764   35589999


Q ss_pred             HHHHHHHHHHHh-CCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHhhhh
Q psy12581         78 WSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKMK  152 (153)
Q Consensus        78 ~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~~~~  152 (153)
                      ||+|++++++++ |..||...........+. .......+...+..+.+++.+||+.+|++|||+.++++.|+++.
T Consensus       191 ~slG~~l~~ll~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~  265 (269)
T 4hcu_A          191 WSFGVLMWEVFSEGKIPYENRSNSEVVEDIS-TGFRLYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIA  265 (269)
T ss_dssp             HHHHHHHHHHHTTSCCTTTTCCHHHHHHHHH-TTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhcCCCCCCCCCCHHHHHHHHh-cCccCCCCCcCCHHHHHHHHHHccCCcccCcCHHHHHHHHHHHH
Confidence            999999999999 999998877666554433 44455567778999999999999999999999999999999875

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=99.96  E-value=2.3e-29  Score=172.18  Aligned_cols=142  Identities=21%  Similarity=0.276  Sum_probs=116.8

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc---------CCcccCCcccCccccccCCCCCCcchh
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ---------RGRCYYPAWMSPEALQKKPGDRNLEAC   75 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~---------~~~~~~~~~~~pe~~~~~~~~~~~~~~   75 (153)
                      ..-++.|||++++.|+||++.||+++.++.+||.  |||++...         ....++..|++||.+.+.   .++.++
T Consensus       124 i~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~kl~--Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~  198 (325)
T 3kex_A          124 IAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVA--DFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFG---KYTHQS  198 (325)
T ss_dssp             HHHHHHHHHHTTCCCSCCSSTTEEESSSSCEEEC--SCSGGGGSCCCTTCCC-----CCTTTSCHHHHHHC---CCCHHH
T ss_pred             HHHHHHHHHhCCCCCCccchheEEECCCCeEEEC--CCCcccccCcccccccccCCCCcccccChHHhccC---CCChhh
Confidence            3457899999999999999999999999988888  99998532         223566789999998764   355899


Q ss_pred             hHHHHHHHHHHHHh-CCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHhhhh
Q psy12581         76 DMWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKMK  152 (153)
Q Consensus        76 dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~~~~  152 (153)
                      |+||+|+++|++++ |..||.+......... .........+...+..+.+++.+||..||++|||+.++++.|+++.
T Consensus       199 Di~slG~~l~el~~~g~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~  275 (325)
T 3kex_A          199 DVWSYGVTVWELMTFGAEPYAGLRLAEVPDL-LEKGERLAQPQICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMA  275 (325)
T ss_dssp             HHHHHHHHHHHHHTTSCCTTTTSCTTHHHHH-HHTTCBCCCCTTBCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHT
T ss_pred             HhHHhHHHHHHHHhCCCCCccccCHHHHHHH-HHcCCCCCCCCcCcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence            99999999999999 9999988765554433 3344456667778889999999999999999999999999998874

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=99.96  E-value=4.6e-29  Score=171.51  Aligned_cols=135  Identities=21%  Similarity=0.342  Sum_probs=114.1

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc-------CCcccCCcccCccccccCCCCCCcchhhH
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ-------RGRCYYPAWMSPEALQKKPGDRNLEACDM   77 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~-------~~~~~~~~~~~pe~~~~~~~~~~~~~~dv   77 (153)
                      ..-++.|||++++.|+||++.||+++.+|.+||.  |||++...       ...+||+.|+|||.+.+.   .++.++|+
T Consensus       114 i~~aL~~LH~~~ivHrDlkp~NIll~~~g~vkL~--DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~Di  188 (337)
T 1o6l_A          114 IVSALEYLHSRDVVYRDIKLENLMLDKDGHIKIT--DFGLCKEGISDGATMKTFCGTPEYLAPEVLEDN---DYGRAVDW  188 (337)
T ss_dssp             HHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEEC--CCTTCBCSCCTTCCBCCCEECGGGCCGGGGSSS---CBCTTHHH
T ss_pred             HHHHHHHHHHCCeecCcCCHHHEEECCCCCEEEe--eccchhhcccCCCcccccccChhhCChhhhcCC---CCCchhhc
Confidence            4557899999999999999999999999998888  99998432       345789999999998764   34589999


Q ss_pred             HHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCC-----CHHHHHH
Q psy12581         78 WSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRP-----TFDMVLP  146 (153)
Q Consensus        78 ~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----s~~~~l~  146 (153)
                      ||+|+++|++++|..||.+.........+...  ....|...++.+.+++.+||+.||++||     +++++++
T Consensus       189 wslG~il~ell~g~~Pf~~~~~~~~~~~i~~~--~~~~p~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~  260 (337)
T 1o6l_A          189 WGLGVVMYEMMCGRLPFYNQDHERLFELILME--EIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME  260 (337)
T ss_dssp             HHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC--CCCCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred             ccchhHHHHHhcCCCCCCCCCHHHHHHHHHcC--CCCCCCCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHc
Confidence            99999999999999999887766665555544  3445778899999999999999999999     8888874

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=99.96  E-value=8.8e-30  Score=174.33  Aligned_cols=142  Identities=27%  Similarity=0.438  Sum_probs=117.5

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc----------CCcccCCcccCccccccCCCCCCcch
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ----------RGRCYYPAWMSPEALQKKPGDRNLEA   74 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~----------~~~~~~~~~~~pe~~~~~~~~~~~~~   74 (153)
                      ..-++.|||++++.|+||++.||+++.++.+||.  |||++...          ....+++.|++||.+.+.   .++.+
T Consensus       160 i~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~--Dfg~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~---~~~~~  234 (325)
T 3kul_A          160 VGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVS--DFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFR---TFSSA  234 (325)
T ss_dssp             HHHHHHHHHHTTEECSCCSGGGEEECTTCCEEEC--CCSSCEECC----CCEECC---CCGGGSCHHHHHHC---EECHH
T ss_pred             HHHHHHHHHHCCeeCCCCCcceEEECCCCCEEEC--CCCcccccccCccceeeccCCCCcccccCHhHhcCC---CCCcH
Confidence            3457899999999999999999999999988888  99998432          122446679999998764   34589


Q ss_pred             hhHHHHHHHHHHHHh-CCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHhhhh
Q psy12581         75 CDMWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKMK  152 (153)
Q Consensus        75 ~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~~~~  152 (153)
                      +|+||+|+++|++++ |..||.+.........+ ......+.+..++..+.+++.+||..||++|||+.++++.|+.+.
T Consensus       235 ~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~  312 (325)
T 3kul_A          235 SDVWSFGVVMWEVLAYGERPYWNMTNRDVISSV-EEGYRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALI  312 (325)
T ss_dssp             HHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHH-HTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHcCCCCCcccCCHHHHHHHH-HcCCCCCCCCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence            999999999999998 99999887766655443 344566667789999999999999999999999999999999874

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=99.96  E-value=3.1e-29  Score=172.34  Aligned_cols=142  Identities=25%  Similarity=0.447  Sum_probs=117.9

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc---------CCcccCCcccCccccccCCCCCCcchh
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ---------RGRCYYPAWMSPEALQKKPGDRNLEAC   75 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~---------~~~~~~~~~~~pe~~~~~~~~~~~~~~   75 (153)
                      ..-++.|||++++.|+||++.||+++.++.+|+.  |||++...         ....+++.|++||.+.+.   .++.++
T Consensus       183 i~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~kl~--Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~---~~~~~~  257 (343)
T 1luf_A          183 VAAGMAYLSERKFVHRDLATRNCLVGENMVVKIA--DFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYN---RYTTES  257 (343)
T ss_dssp             HHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEEC--CCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHC---CCCHHH
T ss_pred             HHHHHHHHHhCCeecCCCCcceEEECCCCeEEEe--ecCCCcccccCccccccCCCcccceecChhhhccC---CcCccc
Confidence            3456899999999999999999999999988888  99987321         234567889999998764   355899


Q ss_pred             hHHHHHHHHHHHHh-CCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHhhhh
Q psy12581         76 DMWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKMK  152 (153)
Q Consensus        76 dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~~~~  152 (153)
                      |+||+|+++|++++ |..||.+.........+. .+.....+..++..+.+++.+||..||++|||+.++++.|+++.
T Consensus       258 Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~  334 (343)
T 1luf_A          258 DVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVR-DGNILACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMC  334 (343)
T ss_dssp             HHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHH-TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred             ccHHHHHHHHHHHhcCCCcCCCCChHHHHHHHh-CCCcCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHH
Confidence            99999999999999 999998877665544433 34445567788999999999999999999999999999999875

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=99.96  E-value=9.3e-30  Score=175.42  Aligned_cols=143  Identities=10%  Similarity=0.103  Sum_probs=110.1

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeecccc--chhhccccccccccc--------------CCcccCCcccCccccccCCC
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDL--TARINMADAQFSFQQ--------------RGRCYYPAWMSPEALQKKPG   68 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~--~~kl~~~d~g~~~~~--------------~~~~~~~~~~~pe~~~~~~~   68 (153)
                      ..-++.|||++++.|+||++.||+++.++  .+||.  |||++...              ....+++.|+|||.+.+.  
T Consensus       160 i~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~kL~--Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--  235 (345)
T 2v62_A          160 MLDVLEYIHENEYVHGDIKAANLLLGYKNPDQVYLA--DYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGV--  235 (345)
T ss_dssp             HHHHHHHHHHTTEECSCCSGGGEEEESSSTTSEEEC--CCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTC--
T ss_pred             HHHHHHHHHhCCeeCCCcCHHHEEEccCCCCcEEEE--eCCCceecccccccccchhccccccCCCccccCHHHhcCC--
Confidence            45678999999999999999999999887  66666  99998432              234689999999998864  


Q ss_pred             CCCcchhhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCC---------CCCCHHHHHHHHHHhcCCCCCCC
Q psy12581         69 DRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIP---------PGISSHLSKLIRICMNEDPGKRP  139 (153)
Q Consensus        69 ~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~l~~~cl~~~p~~Rp  139 (153)
                       .++.++|+||+|+++|++++|..||.+...................+         ...+..+.+++.+||..||++||
T Consensus       236 -~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rp  314 (345)
T 2v62_A          236 -ALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVAVQTAKTNLLDELPQSVLKWAPSGSSCCEIAQFLVCAHSLAYDEKP  314 (345)
T ss_dssp             -CCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHHHHHHHHHHHHHTTTHHHHHHSCTTSCCHHHHHHHHHHHTCCTTCCC
T ss_pred             -CCCchhhHHHHHHHHHHHHhCCCCccccccccHHHHHHHHhhcccccHHHHhhccccccHHHHHHHHHHHhhcCcccCC
Confidence             45689999999999999999999996532222111111111111111         26788999999999999999999


Q ss_pred             CHHHHHHHHhhhh
Q psy12581        140 TFDMVLPILDKMK  152 (153)
Q Consensus       140 s~~~~l~~L~~~~  152 (153)
                      +++++++.|+++.
T Consensus       315 s~~~l~~~L~~~~  327 (345)
T 2v62_A          315 NYQALKKILNPHG  327 (345)
T ss_dssp             CHHHHHHHHCTTC
T ss_pred             CHHHHHHHHhccC
Confidence            9999999998753

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=99.96  E-value=4.5e-29  Score=174.13  Aligned_cols=142  Identities=29%  Similarity=0.432  Sum_probs=118.8

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc---------CCcccCCcccCccccccCCCCCCcchh
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ---------RGRCYYPAWMSPEALQKKPGDRNLEAC   75 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~---------~~~~~~~~~~~pe~~~~~~~~~~~~~~   75 (153)
                      ..-++.|||++++.|+||++.||+++.++.+||.  |||++...         ....+++.|++||.+.+.   .++.++
T Consensus       200 i~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~--DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~---~~~~~~  274 (382)
T 3tt0_A          200 VARGMEYLASKKCIHRDLAARNVLVTEDNVMKIA--DFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDR---IYTHQS  274 (382)
T ss_dssp             HHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEEC--SCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSC---CCCHHH
T ss_pred             HHHHHHHHHhCCEecCCCCcceEEEcCCCcEEEc--ccCcccccccccccccccCCCCCcceeCHHHhcCC---CCCchh
Confidence            4457899999999999999999999999988888  99998432         223556789999998764   456899


Q ss_pred             hHHHHHHHHHHHHh-CCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHhhhh
Q psy12581         76 DMWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKMK  152 (153)
Q Consensus        76 dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~~~~  152 (153)
                      |+||+|++++++++ |..||.+........ .+........+..++..+.+++.+||+.+|++|||+.++++.|+++.
T Consensus       275 DiwslG~il~ellt~g~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~  351 (382)
T 3tt0_A          275 DVWSFGVLLWEIFTLGGSPYPGVPVEELFK-LLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIV  351 (382)
T ss_dssp             HHHHHHHHHHHHHTTSCCSSTTCCHHHHHH-HHHTTCCCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCCCCCCCCCCHHHHHH-HHHcCCCCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence            99999999999999 999998876555443 34455566667789999999999999999999999999999998874

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=99.96  E-value=3.3e-29  Score=178.15  Aligned_cols=143  Identities=26%  Similarity=0.412  Sum_probs=118.2

Q ss_pred             chhhHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccccC--------CcccCCcccCccccccCCCCCCcchh
Q psy12581          4 KKIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQR--------GRCYYPAWMSPEALQKKPGDRNLEAC   75 (153)
Q Consensus         4 ~~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~--------~~~~~~~~~~pe~~~~~~~~~~~~~~   75 (153)
                      ...-++.|||++++.|+||.+.||+++.++.+||.  |||++....        ...++..|+|||.+.+.   .++.++
T Consensus       288 qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~--DfG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~s  362 (452)
T 1fmk_A          288 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVA--DFGLARLIEDNEYTARQGAKFPIKWTAPEAALYG---RFTIKS  362 (452)
T ss_dssp             HHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEEC--CCCTTC--------------CCGGGSCHHHHHHC---CCCHHH
T ss_pred             HHHHHHHHHHhCCeeCCCCChhhEEECCCCCEEEC--CCccceecCCCceecccCCcccccccCHhHHhcC---CCCccc
Confidence            34567899999999999999999999999988888  999984321        22456789999998764   456899


Q ss_pred             hHHHHHHHHHHHHh-CCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHhhhh
Q psy12581         76 DMWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKMK  152 (153)
Q Consensus        76 dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~~~~  152 (153)
                      |+||+|+++|++++ |..||.+....+....+ ..+..++.|..++..+.+++.+||+.||++|||++++++.|+.+.
T Consensus       363 DvwslG~~l~el~t~g~~P~~~~~~~~~~~~i-~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~  439 (452)
T 1fmk_A          363 DVWSFGILLTELTTKGRVPYPGMVNREVLDQV-ERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYF  439 (452)
T ss_dssp             HHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHH-HTTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTT
T ss_pred             cHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHH-HcCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHh
Confidence            99999999999999 99999887766554443 455566777889999999999999999999999999999998874

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=99.96  E-value=5.7e-29  Score=169.92  Aligned_cols=141  Identities=24%  Similarity=0.418  Sum_probs=114.8

Q ss_pred             hhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc---------CCcccCCcccCccccccCCCCCCcchhh
Q psy12581          6 IVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ---------RGRCYYPAWMSPEALQKKPGDRNLEACD   76 (153)
Q Consensus         6 ~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~---------~~~~~~~~~~~pe~~~~~~~~~~~~~~d   76 (153)
                      .-++.|||++++.|+||++.||+++.++.+|+.  |||.+...         ....+++.|++||.+.+.   .++.++|
T Consensus       147 ~~al~~LH~~~ivH~Dikp~NIli~~~~~~kl~--Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~D  221 (323)
T 3qup_A          147 ACGMEYLSSRNFIHRDLAARNCMLAEDMTVCVA--DFGLSRKIYSGDYYRQGCASKLPVKWLALESLADN---LYTVHSD  221 (323)
T ss_dssp             HHHHHHHHHTTCCCSCCSGGGEEECTTSCEEEC--CCCC-----------------CCGGGCCHHHHHHC---CCCHHHH
T ss_pred             HHHHHHHHcCCcccCCCCcceEEEcCCCCEEEe--eccccccccccccccccccccCcccccCchhhcCC---CCCCccc
Confidence            457889999999999999999999999988888  99998432         122456789999998764   3558999


Q ss_pred             HHHHHHHHHHHHh-CCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHhhhh
Q psy12581         77 MWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKMK  152 (153)
Q Consensus        77 v~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~~~~  152 (153)
                      +||+|+++|++++ |..||.+.........+. .......+...+..+.+++.+||+.||++|||+.++++.|+++.
T Consensus       222 i~slG~il~ell~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l  297 (323)
T 3qup_A          222 VWAFGVTMWEIMTRGQTPYAGIENAEIYNYLI-GGNRLKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENIL  297 (323)
T ss_dssp             HHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHH-TTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             hhhHHHHHHHHHhCCCCCccccChHHHHHHHh-cCCCCCCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence            9999999999999 999998877766655444 34455667788999999999999999999999999999998874

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=99.96  E-value=2.6e-29  Score=174.55  Aligned_cols=142  Identities=23%  Similarity=0.374  Sum_probs=116.0

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccc---hhhcccccccccc---------cCCcccCCcccCccccccCCCCCCc
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLT---ARINMADAQFSFQ---------QRGRCYYPAWMSPEALQKKPGDRNL   72 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~---~kl~~~d~g~~~~---------~~~~~~~~~~~~pe~~~~~~~~~~~   72 (153)
                      ..-++.|||++++.|+||++.||+++.++.   +||.  |||++..         .....+++.|++||.+.+.   .++
T Consensus       190 i~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~kL~--DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~---~~~  264 (367)
T 3l9p_A          190 IACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIG--DFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEG---IFT  264 (367)
T ss_dssp             HHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEEC--CCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHC---CCC
T ss_pred             HHHHHHHHHhCCeeCCCCChhhEEEecCCCCceEEEC--CCccccccccccccccCCCcCCcccEECHHHhcCC---CCC
Confidence            345789999999999999999999996554   6666  9999832         1223568899999998764   455


Q ss_pred             chhhHHHHHHHHHHHHh-CCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHhhh
Q psy12581         73 EACDMWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKM  151 (153)
Q Consensus        73 ~~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~~~  151 (153)
                      .++|+||+|++++++++ |..||.+.........+ ..+.....+...+..+.+++.+||+.+|++|||+.++++.|+.+
T Consensus       265 ~~~DvwslG~il~ellt~g~~pf~~~~~~~~~~~i-~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~  343 (367)
T 3l9p_A          265 SKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFV-TSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYC  343 (367)
T ss_dssp             HHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHH-HTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             cHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH-HcCCCCCCCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence            89999999999999998 99999887766655443 34445566778899999999999999999999999999999876


Q ss_pred             h
Q psy12581        152 K  152 (153)
Q Consensus       152 ~  152 (153)
                      .
T Consensus       344 ~  344 (367)
T 3l9p_A          344 T  344 (367)
T ss_dssp             H
T ss_pred             h
Confidence            4

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=99.96  E-value=5.9e-29  Score=166.90  Aligned_cols=142  Identities=25%  Similarity=0.324  Sum_probs=117.0

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc--------CCcccCCcccCccccccCCCCCCcchhh
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ--------RGRCYYPAWMSPEALQKKPGDRNLEACD   76 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~--------~~~~~~~~~~~pe~~~~~~~~~~~~~~d   76 (153)
                      ..-++.|||++++.|+||.+.||+++.++.+|+.  |||.+...        ....+++.|++||.+.+.   .++.++|
T Consensus       122 i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~--Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~D  196 (281)
T 3cc6_A          122 ICKAMAYLESINCVHRDIAVRNILVASPECVKLG--DFGLSRYIEDEDYYKASVTRLPIKWMSPESINFR---RFTTASD  196 (281)
T ss_dssp             HHHHHHHHHHTTCCCCCCSGGGEEEEETTEEEEC--CCCGGGCC---------CCCCCGGGCCHHHHHHC---CCCHHHH
T ss_pred             HHHHHHHHHHCCcccCCCccceEEECCCCcEEeC--ccCCCcccccccccccccCCCCcceeCchhhccC---CCCchhc
Confidence            3457899999999999999999999999988888  99998432        223456789999998754   3558999


Q ss_pred             HHHHHHHHHHHHh-CCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHhhhh
Q psy12581         77 MWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKMK  152 (153)
Q Consensus        77 v~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~~~~  152 (153)
                      +||+|++++++++ |..||........... .......+.+...++.+.+++.+||..+|++|||+.++++.|+++.
T Consensus       197 i~slG~il~~llt~g~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~  272 (281)
T 3cc6_A          197 VWMFAVCMWEILSFGKQPFFWLENKDVIGV-LEKGDRLPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVY  272 (281)
T ss_dssp             HHHHHHHHHHHHTTTCCTTTTSCGGGHHHH-HHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             cHHHHHHHHHHHhCCCCCcccCChHHHHHH-HhcCCCCCCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHHHHH
Confidence            9999999999998 9999987665554433 3344455567778999999999999999999999999999998874

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=99.96  E-value=2.8e-29  Score=167.40  Aligned_cols=143  Identities=25%  Similarity=0.471  Sum_probs=117.7

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc--------CCcccCCcccCccccccCCCCCCcchhh
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ--------RGRCYYPAWMSPEALQKKPGDRNLEACD   76 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~--------~~~~~~~~~~~pe~~~~~~~~~~~~~~d   76 (153)
                      ..-++.|||++++.|+||.+.||+++.++.+++.  |||.+...        ....+++.|++||.+.+.   .++.++|
T Consensus       113 i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~l~--Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~D  187 (268)
T 3sxs_A          113 VCEGMAFLESHQFIHRDLAARNCLVDRDLCVKVS--DFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYF---KYSSKSD  187 (268)
T ss_dssp             HHHHHHHHHHTTEEESSCSGGGEEECTTCCEEEC--CTTCEEECCTTCEEECCSCCCCGGGCCHHHHHHS---EEETTHH
T ss_pred             HHHHHHHHHHCCeecCCcCcceEEECCCCCEEEc--cCccceecchhhhhcccCCCcCcccCCHHHHhcc---CCchhhh
Confidence            3457899999999999999999999999988888  99988432        223456679999998764   3457899


Q ss_pred             HHHHHHHHHHHHh-CCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHhhhhC
Q psy12581         77 MWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKMKR  153 (153)
Q Consensus        77 v~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~~~~~  153 (153)
                      +||+|++++++++ |..||...........+. .......+...+..+.+++.+||+.+|++|||+.++++.|+.+++
T Consensus       188 i~slG~il~~l~~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~  264 (268)
T 3sxs_A          188 VWAFGILMWEVFSLGKMPYDLYTNSEVVLKVS-QGHRLYRPHLASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLRE  264 (268)
T ss_dssp             HHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHH-TTCCCCCCTTSCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC
T ss_pred             hHHHHHHHHHHHcCCCCCccccChHHHHHHHH-cCCCCCCCCcChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhh
Confidence            9999999999998 999998777665554433 344455567789999999999999999999999999999999863

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=99.96  E-value=1.2e-28  Score=166.42  Aligned_cols=142  Identities=27%  Similarity=0.491  Sum_probs=114.5

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc-----------CCcccCCcccCccccccCCCCCCcc
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ-----------RGRCYYPAWMSPEALQKKPGDRNLE   73 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~-----------~~~~~~~~~~~pe~~~~~~~~~~~~   73 (153)
                      ..-++.|||++++.|+||++.||+++.++.+|+.  |||.+...           ....+++.|++||.+.+.   .++.
T Consensus       133 i~~~l~~LH~~~i~H~dikp~Nili~~~~~~kl~--Dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~  207 (298)
T 3pls_A          133 VARGMEYLAEQKFVHRDLAARNCMLDESFTVKVA--DFGLARDILDREYYSVQQHRHARLPVKWTALESLQTY---RFTT  207 (298)
T ss_dssp             HHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEEC--CTTSSCTTTTGGGGCSCCSSCTTCGGGGSCHHHHTTC---CCCH
T ss_pred             HHHHHHHHHhCCcccCCCCcceEEEcCCCcEEeC--cCCCcccccCCcccccccCcCCCCCccccChhhhccC---CCCh
Confidence            3457899999999999999999999999988888  99988422           223567789999998764   4558


Q ss_pred             hhhHHHHHHHHHHHHhCCC-CCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHhhhh
Q psy12581         74 ACDMWSFAVLLWELATREV-PFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKMK  152 (153)
Q Consensus        74 ~~dv~s~g~~~~~~~~g~~-p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~~~~  152 (153)
                      ++|+||+|++++++++|.. ||........ ..........+.+...+..+.+++.+||+.+|++|||+.++++.|+++.
T Consensus       208 ~~Di~slG~il~~l~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~  286 (298)
T 3pls_A          208 KSDVWSFGVLLWELLTRGAPPYRHIDPFDL-THFLAQGRRLPQPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIV  286 (298)
T ss_dssp             HHHHHHHHHHHHHHHHTSCCTTTTSCGGGH-HHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             hhchhhHHHHHHHHhhCCCCCCccCCHHHH-HHHhhcCCCCCCCccchHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence            9999999999999999554 4544444443 3444455556667778999999999999999999999999999998874

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=99.96  E-value=7.1e-29  Score=166.31  Aligned_cols=142  Identities=23%  Similarity=0.422  Sum_probs=114.7

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc----CCcccCCcccCccccccCCCCCCcchhhHHHH
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ----RGRCYYPAWMSPEALQKKPGDRNLEACDMWSF   80 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~----~~~~~~~~~~~pe~~~~~~~~~~~~~~dv~s~   80 (153)
                      ..-++.|||++++.|+||.+.||+++.++.+++.  |||.+...    ....+++.|++||.+.+.   .++.++|+||+
T Consensus       126 i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~l~--Dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~sl  200 (278)
T 1byg_A          126 VCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVS--DFGLTKEASSTQDTGKLPVKWTAPEALREK---KFSTKSDVWSF  200 (278)
T ss_dssp             HHHHHHHHHHTTCCCSCCSGGGEEECTTSCEEEC--CCCC------------CCTTTSCHHHHHHC---CCCHHHHHHHH
T ss_pred             HHHHHHHHHhCCccccCCCcceEEEeCCCcEEEe--eccccccccccccCCCccccccCHHHhCCC---CCCchhcHHHH
Confidence            3457889999999999999999999999988888  99987433    233567889999998764   45589999999


Q ss_pred             HHHHHHHHh-CCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHhhhh
Q psy12581         81 AVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKMK  152 (153)
Q Consensus        81 g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~~~~  152 (153)
                      |++++++++ |..||........... ...+.....+...++.+.+++.+||..||++|||+.++++.|++++
T Consensus       201 G~il~~l~t~g~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~  272 (278)
T 1byg_A          201 GILLWEIYSFGRVPYPRIPLKDVVPR-VEKGYKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIK  272 (278)
T ss_dssp             HHHHHHHHTTSCCSCTTSCGGGHHHH-HTTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHhCCCCCCCCCCHHHHHHH-HhcCCCCCCcccCCHHHHHHHHHHhcCChhhCCCHHHHHHHHHHHH
Confidence            999999998 9999987765554433 3344455667788999999999999999999999999999999875

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=99.96  E-value=1.9e-29  Score=175.04  Aligned_cols=144  Identities=10%  Similarity=0.032  Sum_probs=110.7

Q ss_pred             chhhHHhhhhcCCCCCCCeeeeeeeec--cccchhhccccccccccc--------------CCcccCCcccCccccccCC
Q psy12581          4 KKIVYSFYLNSKKSKTSNAFLFCCQID--EDLTARINMADAQFSFQQ--------------RGRCYYPAWMSPEALQKKP   67 (153)
Q Consensus         4 ~~~~~~~~lh~~~i~~~ni~~~~~~~~--~~~~~kl~~~d~g~~~~~--------------~~~~~~~~~~~pe~~~~~~   67 (153)
                      ...-++.|||++++.|+||++.||+++  .++.+||.  |||++...              ....||+.|++||.+.+. 
T Consensus       160 qi~~~l~~lH~~~iiHrDlkp~Nill~~~~~~~~kl~--DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-  236 (364)
T 3op5_A          160 RILDILEYIHEHEYVHGDIKASNLLLNYKNPDQVYLV--DYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGV-  236 (364)
T ss_dssp             HHHHHHHHHHHTTEECCCCCGGGEEEESSCTTCEEEC--CCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTC-
T ss_pred             HHHHHHHHHHHCCeEEecCCHHHEEEecCCCCeEEEE--ECCcceecccCCcccccccCcccccCCCCCccCHHHhCCC-
Confidence            345678999999999999999999999  77777777  99998322              123489999999998864 


Q ss_pred             CCCCcchhhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhcccc---------CCCCCCCHHHHHHHHHHhcCCCCCC
Q psy12581         68 GDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRI---------TIPPGISSHLSKLIRICMNEDPGKR  138 (153)
Q Consensus        68 ~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~l~~~cl~~~p~~R  138 (153)
                        .++.++|+||+|+++|++++|+.||.+.................         -.+...+..+.+++..||..+|++|
T Consensus       237 --~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~R  314 (364)
T 3op5_A          237 --APSRRGDLEILGYCMIQWLTGHLPWEDNLKDPKYVRDSKIRYRENIASLMDKCFPAANAPGEIAKYMETVKLLDYTEK  314 (364)
T ss_dssp             --CCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHHHHHHHHHHHHHCHHHHHHHHSCTTCCCHHHHHHHHHHHTCCTTCC
T ss_pred             --CCCchhhHHHHHHHHHHHHhCCCCccccccCHHHHHHHHHHhhhhHHHHHHHhcccccCHHHHHHHHHHHhcCCCCCC
Confidence              35689999999999999999999998643222221111111000         0125678999999999999999999


Q ss_pred             CCHHHHHHHHhhhh
Q psy12581        139 PTFDMVLPILDKMK  152 (153)
Q Consensus       139 ps~~~~l~~L~~~~  152 (153)
                      |++.++++.|+++.
T Consensus       315 P~~~~l~~~l~~~~  328 (364)
T 3op5_A          315 PLYENLRDILLQGL  328 (364)
T ss_dssp             CCHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHH
Confidence            99999999998763

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=99.96  E-value=6.3e-29  Score=168.96  Aligned_cols=142  Identities=26%  Similarity=0.366  Sum_probs=117.9

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc---------CCcccCCcccCccccccCCCCCCcchh
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ---------RGRCYYPAWMSPEALQKKPGDRNLEAC   75 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~---------~~~~~~~~~~~pe~~~~~~~~~~~~~~   75 (153)
                      ..-++.|||++++.|+||++.||+++.++.+|+.  |||++...         ....+++.|++||.+.+.   .++.++
T Consensus       159 i~~~l~~lH~~~ivH~dikp~NIli~~~~~~kl~--Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~  233 (314)
T 2ivs_A          159 ISQGMQYLAEMKLVHRDLAARNILVAEGRKMKIS--DFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDH---IYTTQS  233 (314)
T ss_dssp             HHHHHHHHHHTTEECCCCSGGGEEEETTTEEEEC--CCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHC---EECHHH
T ss_pred             HHHHHHHHHHCCCcccccchheEEEcCCCCEEEc--cccccccccccccceeccCCCCcccccChhhhcCC---CcCchh
Confidence            3457899999999999999999999999988888  99988432         223566789999998764   345899


Q ss_pred             hHHHHHHHHHHHHh-CCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHhhhh
Q psy12581         76 DMWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKMK  152 (153)
Q Consensus        76 dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~~~~  152 (153)
                      |+||+|++++++++ |..||.+......... .........+...+..+.+++.+||+.||++||++.++++.|+++.
T Consensus       234 Di~slG~il~el~t~g~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~  310 (314)
T 2ivs_A          234 DVWSFGVLLWEIVTLGGNPYPGIPPERLFNL-LKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMM  310 (314)
T ss_dssp             HHHHHHHHHHHHHTTSCCSSTTCCGGGHHHH-HHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH-hhcCCcCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence            99999999999999 9999988776555433 3444456667788999999999999999999999999999998874

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=99.96  E-value=3.4e-29  Score=168.66  Aligned_cols=143  Identities=24%  Similarity=0.337  Sum_probs=118.7

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc----------CCcccCCcccCccccccCCCCCCcch
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ----------RGRCYYPAWMSPEALQKKPGDRNLEA   74 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~----------~~~~~~~~~~~pe~~~~~~~~~~~~~   74 (153)
                      ..-++.|||++++.|+||.+.||+++.++.+|+.  |||.+...          ....++..|++||.+.+.   .++.+
T Consensus       130 i~~~l~~lH~~~i~H~dikp~Nili~~~~~~kl~--Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~  204 (291)
T 1u46_A          130 VAEGMGYLESKRFIHRDLAARNLLLATRDLVKIG--DFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTR---TFSHA  204 (291)
T ss_dssp             HHHHHHHHHHTTEECSCCCGGGEEEEETTEEEEC--CCTTCEECCC-CCEEEC-----CCGGGCCHHHHHHC---EEEHH
T ss_pred             HHHHHHHHHhCCcccCCCchheEEEcCCCCEEEc--cccccccccccccchhhhccCCCCceeeCchhhcCC---CCCch
Confidence            3456899999999999999999999999988888  99987432          123456689999998754   34589


Q ss_pred             hhHHHHHHHHHHHHh-CCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHhhhh
Q psy12581         75 CDMWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKMK  152 (153)
Q Consensus        75 ~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~~~~  152 (153)
                      +|+||+|++++++++ |..||.+.........+.......+.+...+..+.+++.+||..||++|||+.++++.|+++.
T Consensus       205 ~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~  283 (291)
T 1u46_A          205 SDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQ  283 (291)
T ss_dssp             HHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTSCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC
T ss_pred             hhHHHHHHHHHHHHhCCCCCcccCCHHHHHHHHHccCCCCCCCcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhC
Confidence            999999999999999 999998887776666655555556667788999999999999999999999999999998764

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=99.96  E-value=5.8e-29  Score=173.13  Aligned_cols=142  Identities=26%  Similarity=0.456  Sum_probs=111.7

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc-----------CCcccCCcccCccccccCCCCCCcc
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ-----------RGRCYYPAWMSPEALQKKPGDRNLE   73 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~-----------~~~~~~~~~~~pe~~~~~~~~~~~~   73 (153)
                      ..-++.|||++++.|+||++.||+++.++.+|+.  |||++...           ....+++.|++||.+.+.   .++.
T Consensus       201 i~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kL~--DFG~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~  275 (373)
T 3c1x_A          201 VAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVA--DFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQ---KFTT  275 (373)
T ss_dssp             HHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEEC--CC---------------------CCGGGSCHHHHHHC---CCCH
T ss_pred             HHHHHHHHHHCCEecCccchheEEECCCCCEEEe--eccccccccccccccccccCCCCCcccccChHHhcCC---CCCc
Confidence            4557899999999999999999999999988888  99998432           123456789999998764   4558


Q ss_pred             hhhHHHHHHHHHHHHh-CCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHhhhh
Q psy12581         74 ACDMWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKMK  152 (153)
Q Consensus        74 ~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~~~~  152 (153)
                      ++|+||+|+++|++++ |.+||...........+ ..+.....|...+..+.+++.+||+.+|++|||+.++++.|+++.
T Consensus       276 ~~DvwSlG~il~ellt~~~~p~~~~~~~~~~~~~-~~~~~~~~p~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~  354 (373)
T 3c1x_A          276 KSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYL-LQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIF  354 (373)
T ss_dssp             HHHHHHHHHHHHHHHTTSCCSCTTSCSSCHHHHH-HTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhCcCCCCCCCCHHHHHHHH-HcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence            9999999999999999 77888776655544443 344455567778999999999999999999999999999998863

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=99.96  E-value=3.9e-29  Score=179.52  Aligned_cols=143  Identities=25%  Similarity=0.443  Sum_probs=119.6

Q ss_pred             chhhHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccccC--------CcccCCcccCccccccCCCCCCcchh
Q psy12581          4 KKIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQR--------GRCYYPAWMSPEALQKKPGDRNLEAC   75 (153)
Q Consensus         4 ~~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~--------~~~~~~~~~~pe~~~~~~~~~~~~~~   75 (153)
                      ...-++.|||+++|.|+||++.||+++.++.+||.  |||++....        ...++..|+|||.+.+.   .++.++
T Consensus       326 qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~--DFG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~s  400 (495)
T 1opk_A          326 QISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVA--DFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYN---KFSIKS  400 (495)
T ss_dssp             HHHHHHHHHHHTTEECSCCSGGGEEECGGGCEEEC--CTTCEECCTTCCEECCTTCCCCGGGCCHHHHHHC---EECHHH
T ss_pred             HHHHHHHHHHhCCcccCCCChhhEEECCCCcEEEe--ecccceeccCCceeecCCCcCCcceeCHhHHhcC---CCCcHH
Confidence            34557899999999999999999999999998888  999985331        22445689999998764   355899


Q ss_pred             hHHHHHHHHHHHHh-CCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHhhhh
Q psy12581         76 DMWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKMK  152 (153)
Q Consensus        76 dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~~~~  152 (153)
                      |+||||+++|++++ |..||.+....... ..+........|..++..+.+++.+||+.||++|||+.++++.|+.+.
T Consensus       401 DvwSlG~~l~el~t~g~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~  477 (495)
T 1opk_A          401 DVWAFGVLLWEIATYGMSPYPGIDLSQVY-ELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF  477 (495)
T ss_dssp             HHHHHHHHHHHHHTTSCCSSTTCCGGGHH-HHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSC
T ss_pred             hHHhHHHHHHHHHhCCCCCCCCCCHHHHH-HHHHcCCCCCCCCCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHH
Confidence            99999999999999 99999887765544 344556667778889999999999999999999999999999998863

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=99.96  E-value=6.2e-29  Score=171.82  Aligned_cols=135  Identities=21%  Similarity=0.326  Sum_probs=113.7

Q ss_pred             chhhHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccc-------cCCcccCCcccCccccccCCCCCCcchhh
Q psy12581          4 KKIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQ-------QRGRCYYPAWMSPEALQKKPGDRNLEACD   76 (153)
Q Consensus         4 ~~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~-------~~~~~~~~~~~~pe~~~~~~~~~~~~~~d   76 (153)
                      ....++.|||++++.|+||++.||+++.+|.+||.  |||++..       ....+||+.|+|||.+.+.   .++.++|
T Consensus       129 qi~~aL~~LH~~givHrDlkp~NIll~~~g~vkL~--DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~D  203 (353)
T 2i0e_A          129 EIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIA--DFGMCKENIWDGVTTKTFCGTPDYIAPEIIAYQ---PYGKSVD  203 (353)
T ss_dssp             HHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEEC--CCTTCBCCCCTTCCBCCCCSCGGGCCHHHHTTC---CBSTHHH
T ss_pred             HHHHHHHHHHHCCEEeccCCHHHEEEcCCCcEEEE--eCCcccccccCCcccccccCCccccChhhhcCC---CcCCccc
Confidence            34567899999999999999999999999998888  9998853       2345789999999998764   3458999


Q ss_pred             HHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCC-----HHHHH
Q psy12581         77 MWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPT-----FDMVL  145 (153)
Q Consensus        77 v~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps-----~~~~l  145 (153)
                      +||+|+++|++++|..||.+.........+...  ....|...+..+.+++.+||..||++||+     +++++
T Consensus       204 iwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~--~~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~  275 (353)
T 2i0e_A          204 WWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEH--NVAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIK  275 (353)
T ss_dssp             HHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC--CCCCCTTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHH
T ss_pred             ccchHHHHHHHHcCCCCCCCCCHHHHHHHHHhC--CCCCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHh
Confidence            999999999999999999888777766666554  34457789999999999999999999995     46665

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=99.96  E-value=2.3e-29  Score=173.99  Aligned_cols=135  Identities=19%  Similarity=0.292  Sum_probs=112.3

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc-------CCcccCCcccCccccccCCCCCCcchhhH
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ-------RGRCYYPAWMSPEALQKKPGDRNLEACDM   77 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~-------~~~~~~~~~~~pe~~~~~~~~~~~~~~dv   77 (153)
                      ..-++.|||+++|.|+||++.||+++.+|.+||.  |||++...       ...+||+.|+|||.+.+..   ++.++|+
T Consensus       133 i~~aL~~LH~~givHrDlkp~NILl~~~g~ikL~--DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~~Di  207 (353)
T 3txo_A          133 IISALMFLHDKGIIYRDLKLDNVLLDHEGHCKLA--DFGMCKEGICNGVTTATFCGTPDYIAPEILQEML---YGPAVDW  207 (353)
T ss_dssp             HHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEEC--CCTTCBCSCC---------CCGGGCCHHHHHHHH---CTTHHHH
T ss_pred             HHHHHHHHHHCCCcccCCCHHHEEECCCCCEEEc--cccceeecccCCccccccCCCcCeEChhhcCCCC---cCCccCC
Confidence            4567899999999999999999999999999888  99998532       3457999999999987643   4589999


Q ss_pred             HHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCH------HHHHH
Q psy12581         78 WSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTF------DMVLP  146 (153)
Q Consensus        78 ~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~------~~~l~  146 (153)
                      ||+|+++|++++|..||.+.........+...  ....|...+..+.+++.+||+.||++||++      +++++
T Consensus       208 wslG~il~ell~G~~Pf~~~~~~~~~~~i~~~--~~~~p~~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~  280 (353)
T 3txo_A          208 WAMGVLLYEMLCGHAPFEAENEDDLFEAILND--EVVYPTWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILR  280 (353)
T ss_dssp             HHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC--CCCCCTTSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHT
T ss_pred             CcchHHHHHHHhCCCCCCCCCHHHHHHHHHcC--CCCCCCCCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhh
Confidence            99999999999999999988877776666554  344577789999999999999999999998      66653

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=99.96  E-value=4.4e-29  Score=168.61  Aligned_cols=143  Identities=10%  Similarity=0.053  Sum_probs=111.6

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccc-----hhhccccccccccc--------------CCcccCCcccCcccccc
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLT-----ARINMADAQFSFQQ--------------RGRCYYPAWMSPEALQK   65 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~-----~kl~~~d~g~~~~~--------------~~~~~~~~~~~pe~~~~   65 (153)
                      ..-++.|||++++.|+||.+.||+++.++.     +|+.  |||.+...              ....||+.|++||.+.+
T Consensus       115 i~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~--Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  192 (298)
T 1csn_A          115 MLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVV--DFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLG  192 (298)
T ss_dssp             HHHHHHHHHTTTEECCCCCGGGEEECCSSSTTTTCEEEC--CCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTT
T ss_pred             HHHHHHHHHhCCEecCCCCHHHEEeccCCCCCCCeEEEE--ECccccccccccccccccccCccCCCCCcccCCchhhcC
Confidence            455789999999999999999999987765     6666  99998432              23368899999999876


Q ss_pred             CCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCch---hhhHHHHhhcc---ccCCCCCCCHHHHHHHHHHhcCCCCCCC
Q psy12581         66 KPGDRNLEACDMWSFAVLLWELATREVPFADLTPM---EVGMKVALEGL---RITIPPGISSHLSKLIRICMNEDPGKRP  139 (153)
Q Consensus        66 ~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~---~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~cl~~~p~~Rp  139 (153)
                      .   .++.++|+||+|++++++++|+.||.+....   .....+.....   .......++..+.+++.+||+.+|++||
T Consensus       193 ~---~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~RP  269 (298)
T 1csn_A          193 R---EQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLRELCAGFPEEFYKYMHYARNLAFDATP  269 (298)
T ss_dssp             C---CCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHHCCTTCCC
T ss_pred             C---CCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhhccCccHHHHHhhCcHHHHHHHHHHhcCCcccCC
Confidence            4   3568999999999999999999999875432   22222221111   1122346789999999999999999999


Q ss_pred             CHHHHHHHHhhhh
Q psy12581        140 TFDMVLPILDKMK  152 (153)
Q Consensus       140 s~~~~l~~L~~~~  152 (153)
                      +++++++.|+++.
T Consensus       270 ~~~~l~~~l~~~~  282 (298)
T 1csn_A          270 DYDYLQGLFSKVL  282 (298)
T ss_dssp             CHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHH
Confidence            9999999998764

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=99.96  E-value=7.8e-29  Score=181.79  Aligned_cols=142  Identities=22%  Similarity=0.304  Sum_probs=118.5

Q ss_pred             chhhHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccccC----------CcccCCcccCccccccCCCCCCcc
Q psy12581          4 KKIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQR----------GRCYYPAWMSPEALQKKPGDRNLE   73 (153)
Q Consensus         4 ~~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~----------~~~~~~~~~~pe~~~~~~~~~~~~   73 (153)
                      ...-++.|||+++|+|+||++.||+++.++.+||.  |||++....          ...+++.|+|||.+.+.   .++.
T Consensus       444 qi~~~L~~LH~~~iiHrDlkp~NILl~~~~~vkL~--DFGla~~~~~~~~~~~~~~~~~~~~~y~APE~~~~~---~~~~  518 (613)
T 2ozo_A          444 QVSMGMKYLEEKNFVHRNLAARNVLLVNRHYAKIS--DFGLSKALGADDSYYTARSAGKWPLKWYAPECINFR---KFSS  518 (613)
T ss_dssp             HHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEEC--CCSTTTTCC--------------CCTTSCHHHHHHC---CCCH
T ss_pred             HHHHHHHHHHHCCEEcCcCCHHHEEEcCCCcEEEe--eccCcccccCCCceeeeccCCCCccceeCHhhhcCC---CCCc
Confidence            34567899999999999999999999999988888  999985321          12345789999998764   4568


Q ss_pred             hhhHHHHHHHHHHHHh-CCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHhhh
Q psy12581         74 ACDMWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKM  151 (153)
Q Consensus        74 ~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~~~  151 (153)
                      ++|+||||+++||+++ |..||.+....+....+ ..+..+..|..++..+.+++.+||..+|++||++.++++.|+.+
T Consensus       519 ~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i-~~~~~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~  596 (613)
T 2ozo_A          519 RSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFI-EQGKRMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRAC  596 (613)
T ss_dssp             HHHHHHHHHHHHHHHTTSCCTTTTCCSHHHHHHH-HTTCCCCCCTTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH-HcCCCCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence            9999999999999998 99999887766655443 45556777888999999999999999999999999999999876

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=99.96  E-value=1.5e-28  Score=165.08  Aligned_cols=142  Identities=25%  Similarity=0.448  Sum_probs=118.1

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc--------CCcccCCcccCccccccCCCCCCcchhh
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ--------RGRCYYPAWMSPEALQKKPGDRNLEACD   76 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~--------~~~~~~~~~~~pe~~~~~~~~~~~~~~d   76 (153)
                      ..-++.|||++++.|+||.+.||+++.++.+++.  |||.+...        ....+++.|++||.+.+.   .++.++|
T Consensus       129 i~~~l~~lH~~~i~H~dikp~Nili~~~~~~kl~--Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~D  203 (283)
T 3gen_A          129 VCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVS--DFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYS---KFSSKSD  203 (283)
T ss_dssp             HHHHHHHHHHTTCCCSSCSGGGEEECTTSCEEEC--STTGGGGBCCHHHHSTTSTTSCGGGCCHHHHHHC---CCSHHHH
T ss_pred             HHHHHHHHHHCCccCCCCccceEEEcCCCCEEEc--cccccccccccccccccCCccCcccCCHHHhccC---CCCchhh
Confidence            3457899999999999999999999999988888  99998433        223456789999998864   3558999


Q ss_pred             HHHHHHHHHHHHh-CCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHhhhh
Q psy12581         77 MWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKMK  152 (153)
Q Consensus        77 v~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~~~~  152 (153)
                      +||+|++++++++ |..||...........+. .......+...+..+.+++.+||+.+|++|||+.++++.|+++.
T Consensus       204 v~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~  279 (283)
T 3gen_A          204 IWAFGVLMWEIYSLGKMPYERFTNSETAEHIA-QGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVM  279 (283)
T ss_dssp             HHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHH-TTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhCCCCCccccChhHHHHHHh-cccCCCCCCcCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHh
Confidence            9999999999998 999998877665554433 44455567778999999999999999999999999999998864

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=99.96  E-value=4.1e-29  Score=173.89  Aligned_cols=142  Identities=25%  Similarity=0.432  Sum_probs=110.7

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccccC----------CcccCCcccCccccccCCCCCCcch
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQR----------GRCYYPAWMSPEALQKKPGDRNLEA   74 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~----------~~~~~~~~~~pe~~~~~~~~~~~~~   74 (153)
                      ..-++.|||++++.|+||++.||+++.++.+||.  |||++....          ...+++.|++||.+.+.   .++.+
T Consensus       156 i~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kl~--Dfg~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~  230 (373)
T 2qol_A          156 IASGMKYLSDMGYVHRDLAARNILINSNLVCKVS--DFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYR---KFTSA  230 (373)
T ss_dssp             HHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEEC--CC----------------------CTTSCHHHHHHC---CCCHH
T ss_pred             HHHHHHHHHHCCeeCCCCCcceEEEcCCCCEEEC--cCccccccccCCccceeccCCCcCCCccChhhhccC---CcCch
Confidence            4557899999999999999999999999988888  999984321          12345679999998764   45589


Q ss_pred             hhHHHHHHHHHHHHh-CCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHhhhh
Q psy12581         75 CDMWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKMK  152 (153)
Q Consensus        75 ~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~~~~  152 (153)
                      +|+||+|+++|++++ |..||.+......... +..+...+.+...+..+.+++.+||+.+|++||++.++++.|+++.
T Consensus       231 ~Dv~SlG~il~ellt~g~~P~~~~~~~~~~~~-i~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~  308 (373)
T 2qol_A          231 SDVWSYGIVLWEVMSYGERPYWEMSNQDVIKA-VDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLI  308 (373)
T ss_dssp             HHHHHHHHHHHHHHTTC-CTTTTCCHHHHHHH-HHTTEECCCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             hcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH-HHcCCCCCCCccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHH
Confidence            999999999999997 9999988776555443 3345556667778999999999999999999999999999998863

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.96  E-value=1.1e-28  Score=164.34  Aligned_cols=142  Identities=25%  Similarity=0.461  Sum_probs=117.4

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc--------CCcccCCcccCccccccCCCCCCcchhh
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ--------RGRCYYPAWMSPEALQKKPGDRNLEACD   76 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~--------~~~~~~~~~~~pe~~~~~~~~~~~~~~d   76 (153)
                      ..-++.|||++++.|+||.+.||+++.++.+++.  |||.+...        ....+++.|++||.+.+.   .++.++|
T Consensus       113 i~~~l~~lH~~~i~H~dl~p~Nili~~~~~~kl~--dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~D  187 (267)
T 3t9t_A          113 VCEGMAYLEEACVIHRDLAARNCLVGENQVIKVS--DFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFS---RYSSKSD  187 (267)
T ss_dssp             HHHHHHHHHHTTCCCSSCCGGGEEECGGGCEEEC--CTTGGGGBCCHHHHSTTSTTCCGGGCCHHHHHHC---CCCHHHH
T ss_pred             HHHHHHHHHhCCcccCCCchheEEECCCCCEEEc--ccccccccccccccccccccccccccChhhhcCC---Cccchhc
Confidence            3457899999999999999999999999988888  99988432        223556789999998754   3458999


Q ss_pred             HHHHHHHHHHHHh-CCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHhhhh
Q psy12581         77 MWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKMK  152 (153)
Q Consensus        77 v~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~~~~  152 (153)
                      +||+|++++++++ |..||...........+. .......+...+..+.+++.+||..+|++|||+.++++.|+++.
T Consensus       188 i~slG~il~~l~~~g~~p~~~~~~~~~~~~i~-~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~  263 (267)
T 3t9t_A          188 VWSFGVLMWEVFSEGKIPYENRSNSEVVEDIS-TGFRLYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIA  263 (267)
T ss_dssp             HHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHH-TTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             hhhhHHHHHHHhccCCCCCCCCCHHHHHHHHh-cCCcCCCCccCcHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence            9999999999999 899998876655544433 34445556778999999999999999999999999999999874

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=99.96  E-value=9.8e-29  Score=166.78  Aligned_cols=143  Identities=11%  Similarity=0.112  Sum_probs=111.9

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeec---cccchhhccccccccccc--------------CCcccCCcccCccccccCC
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQID---EDLTARINMADAQFSFQQ--------------RGRCYYPAWMSPEALQKKP   67 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~---~~~~~kl~~~d~g~~~~~--------------~~~~~~~~~~~pe~~~~~~   67 (153)
                      ..-++.|||++++.|+||.+.||+++   .++.+|+.  |||.+...              ....+++.|++||.+.+. 
T Consensus       114 i~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~--Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-  190 (296)
T 3uzp_A          114 MISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYII--DFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGI-  190 (296)
T ss_dssp             HHHHHHHHHHTTEECSCCCGGGEEECCGGGTTCEEEC--CCTTCEECBCTTTCCBCCCCCSCCCCSCTTTCCHHHHTTC-
T ss_pred             HHHHHHHHHhCCeeeCCCCHHHeEEecCCCCCeEEEe--eCCCcccccccccccccccccccccccccccCChhhhcCC-
Confidence            34578999999999999999999994   77777777  99998432              234688999999998864 


Q ss_pred             CCCCcchhhHHHHHHHHHHHHhCCCCCCCCCch---hhhHHHHhhcccc---CCCCCCCHHHHHHHHHHhcCCCCCCCCH
Q psy12581         68 GDRNLEACDMWSFAVLLWELATREVPFADLTPM---EVGMKVALEGLRI---TIPPGISSHLSKLIRICMNEDPGKRPTF  141 (153)
Q Consensus        68 ~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~---~~~~~~~~~~~~~---~~~~~~~~~~~~l~~~cl~~~p~~Rps~  141 (153)
                        .++.++|+||+|++++++++|+.||.+....   .....+.......   ..+...+..+.+++.+||+.||++|||+
T Consensus       191 --~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~  268 (296)
T 3uzp_A          191 --EQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDY  268 (296)
T ss_dssp             --CCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHTSCTTCCCCH
T ss_pred             --CCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccCCchHHHHhhCCHHHHHHHHHHHhcCcCcCCCH
Confidence              3558999999999999999999999764322   2222222221111   1235688999999999999999999999


Q ss_pred             HHHHHHHhhhh
Q psy12581        142 DMVLPILDKMK  152 (153)
Q Consensus       142 ~~~l~~L~~~~  152 (153)
                      +++++.|+++.
T Consensus       269 ~~l~~~l~~~~  279 (296)
T 3uzp_A          269 SYLRQLFRNLF  279 (296)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHHH
Confidence            99999998864

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=99.96  E-value=1.5e-28  Score=166.93  Aligned_cols=143  Identities=23%  Similarity=0.375  Sum_probs=111.3

Q ss_pred             hhhHHhhhhc---CCCCCCCeeeeeeeeccccc-hhhccccccccccc----CCcccCCcccCccccccCCCCCCcchhh
Q psy12581          5 KIVYSFYLNS---KKSKTSNAFLFCCQIDEDLT-ARINMADAQFSFQQ----RGRCYYPAWMSPEALQKKPGDRNLEACD   76 (153)
Q Consensus         5 ~~~~~~~lh~---~~i~~~ni~~~~~~~~~~~~-~kl~~~d~g~~~~~----~~~~~~~~~~~pe~~~~~~~~~~~~~~d   76 (153)
                      ..-++.|||+   +++.|+||++.||+++.++. +|+.  |||.+...    ....+++.|++||.+.+.   .++.++|
T Consensus       111 i~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~--Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~D  185 (307)
T 2eva_A          111 CSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKIC--DFGTACDIQTHMTNNKGSAAWMAPEVFEGS---NYSEKCD  185 (307)
T ss_dssp             HHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEEC--CCCC------------CCTTSSCHHHHTCC---CCCTHHH
T ss_pred             HHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEc--ccccccccccccccCCCCCceEChhhhCCC---CCCcHHH
Confidence            3457899999   89999999999999988875 6777  99998432    334689999999998764   4558999


Q ss_pred             HHHHHHHHHHHHhCCCCCCCCCchhh-hHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHhhhh
Q psy12581         77 MWSFAVLLWELATREVPFADLTPMEV-GMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKMK  152 (153)
Q Consensus        77 v~s~g~~~~~~~~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~~~~  152 (153)
                      +||+|++++++++|+.||........ ..........++.+...+..+.+++.+||+.||++|||++++++.|+.+.
T Consensus       186 i~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~  262 (307)
T 2eva_A          186 VFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLM  262 (307)
T ss_dssp             HHHHHHHHHHHHHTCCTTTTTCSSHHHHHHHHHTTCCCCCBTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHG
T ss_pred             HHHHHHHHHHHHHCCCCchhhCccHHHHHHHHhcCCCCCcccccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHH
Confidence            99999999999999999976443221 22223344455566778999999999999999999999999999998874

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=99.96  E-value=1.6e-28  Score=167.09  Aligned_cols=142  Identities=24%  Similarity=0.403  Sum_probs=115.6

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc---------CCcccCCcccCccccccCCCCCCcchh
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ---------RGRCYYPAWMSPEALQKKPGDRNLEAC   75 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~---------~~~~~~~~~~~pe~~~~~~~~~~~~~~   75 (153)
                      ..-++.|||++++.|+||.+.||+++.++.+|+.  |||++...         ....+++.|++||.+.+.   .++.++
T Consensus       156 i~~aL~~LH~~~ivH~dikp~NIli~~~~~~kl~--Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~  230 (313)
T 3brb_A          156 IALGMEYLSNRNFLHRDLAARNCMLRDDMTVCVA--DFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADR---VYTSKS  230 (313)
T ss_dssp             HHHHHHHHHTTTCCCCCCSGGGEEECTTSCEEEC--SCSCC----------------CCGGGSCHHHHHSS---CCCHHH
T ss_pred             HHHHHHHHHhCCcccCCCCcceEEEcCCCcEEEe--ecCcceecccccccCcccccCCCccccCchhhcCC---Cccchh
Confidence            3457899999999999999999999999988888  99988432         123456789999998764   455899


Q ss_pred             hHHHHHHHHHHHHh-CCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHhhhh
Q psy12581         76 DMWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKMK  152 (153)
Q Consensus        76 dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~~~~  152 (153)
                      |+||+|++++++++ |..||.+.........+. .......+...+..+.+++.+||..+|++|||+.++++.|+++.
T Consensus       231 Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~  307 (313)
T 3brb_A          231 DVWAFGVTMWEIATRGMTPYPGVQNHEMYDYLL-HGHRLKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLL  307 (313)
T ss_dssp             HHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHH-TTCCCCCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHH-cCCCCCCCccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence            99999999999999 889998877665544433 44455667788999999999999999999999999999998874

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=99.96  E-value=9.4e-29  Score=181.90  Aligned_cols=143  Identities=22%  Similarity=0.336  Sum_probs=118.4

Q ss_pred             chhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc----------CCcccCCcccCccccccCCCCCCcc
Q psy12581          4 KKIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ----------RGRCYYPAWMSPEALQKKPGDRNLE   73 (153)
Q Consensus         4 ~~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~----------~~~~~~~~~~~pe~~~~~~~~~~~~   73 (153)
                      ...-++.|||+++|+|+||++.||+++.++.+||.  |||++...          ....+++.|+|||.+.+.   .++.
T Consensus       477 qi~~~L~yLH~~~iiHrDLkp~NILl~~~~~~kL~--DFGla~~~~~~~~~~~~~~~~~~t~~y~APE~~~~~---~~~~  551 (635)
T 4fl3_A          477 QVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKIS--DFGLSKALRADENYYKAQTHGKWPVKWYAPECINYY---KFSS  551 (635)
T ss_dssp             HHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEEC--CTTHHHHTTC-------------CGGGSCHHHHHHC---CCCH
T ss_pred             HHHHHHHHHHHCCEeCCCCChHhEEEeCCCCEEEE--EcCCccccccCccccccccCCCCceeeeChhhhcCC---CCCc
Confidence            34567899999999999999999999999988888  99998432          122456789999999764   4558


Q ss_pred             hhhHHHHHHHHHHHHh-CCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHhhhh
Q psy12581         74 ACDMWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKMK  152 (153)
Q Consensus        74 ~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~~~~  152 (153)
                      ++|+||+|+++|++++ |..||.+......... +..+.....|..++..+.+++.+||..||++||++.++++.|+++.
T Consensus       552 ~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~-i~~~~~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~  630 (635)
T 4fl3_A          552 KSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAM-LEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYY  630 (635)
T ss_dssp             HHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHH-HHTTCCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH-HHcCCCCCCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHH
Confidence            9999999999999998 9999988776665444 4455566778889999999999999999999999999999998763

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=99.96  E-value=7.2e-29  Score=167.36  Aligned_cols=143  Identities=11%  Similarity=0.109  Sum_probs=112.2

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeee---ccccchhhccccccccccc--------------CCcccCCcccCccccccCC
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQI---DEDLTARINMADAQFSFQQ--------------RGRCYYPAWMSPEALQKKP   67 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~---~~~~~~kl~~~d~g~~~~~--------------~~~~~~~~~~~pe~~~~~~   67 (153)
                      ..-++.|||++++.|+||++.||++   +.++.+|+.  |||.+...              ....+++.|++||.+.+. 
T Consensus       114 i~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~~~~kL~--Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-  190 (296)
T 4hgt_A          114 MISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYII--DFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGI-  190 (296)
T ss_dssp             HHHHHHHHHHTTEECSCCSGGGEEECCGGGTTCEEEC--CCTTCEECBCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTC-
T ss_pred             HHHHHHHHHHCCeecCCCCHHHeeeeccCCCCeEEEe--cCccceeccCcccCccCCCCcccccCCCccccchHHhcCC-
Confidence            4557899999999999999999999   777878877  99998432              234688999999998864 


Q ss_pred             CCCCcchhhHHHHHHHHHHHHhCCCCCCCCCchh---hhHHHHhhccccC---CCCCCCHHHHHHHHHHhcCCCCCCCCH
Q psy12581         68 GDRNLEACDMWSFAVLLWELATREVPFADLTPME---VGMKVALEGLRIT---IPPGISSHLSKLIRICMNEDPGKRPTF  141 (153)
Q Consensus        68 ~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~---~~~~~~~~~~~~~---~~~~~~~~~~~l~~~cl~~~p~~Rps~  141 (153)
                        .++.++|+||+|+++|++++|+.||.+.....   ....+.......+   .....+..+.+++.+||+.+|++|||+
T Consensus       191 --~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~  268 (296)
T 4hgt_A          191 --EQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDY  268 (296)
T ss_dssp             --CCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHTSCTTCCCCH
T ss_pred             --CCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccccchhhhhhccCCHHHHHHHHHHHhcCCCCCCCH
Confidence              35589999999999999999999997754332   2222222211111   225678999999999999999999999


Q ss_pred             HHHHHHHhhhh
Q psy12581        142 DMVLPILDKMK  152 (153)
Q Consensus       142 ~~~l~~L~~~~  152 (153)
                      +++++.|+++.
T Consensus       269 ~~l~~~l~~~~  279 (296)
T 4hgt_A          269 SYLRQLFRNLF  279 (296)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHHH
Confidence            99999998764

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=99.96  E-value=9.7e-29  Score=178.92  Aligned_cols=143  Identities=26%  Similarity=0.415  Sum_probs=120.2

Q ss_pred             chhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc--------CCcccCCcccCccccccCCCCCCcchh
Q psy12581          4 KKIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ--------RGRCYYPAWMSPEALQKKPGDRNLEAC   75 (153)
Q Consensus         4 ~~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~--------~~~~~~~~~~~pe~~~~~~~~~~~~~~   75 (153)
                      ...-++.|||+++|.|+||++.||+++.++.+||.  |||++...        ....++..|++||.+...   .++.++
T Consensus       371 qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~--DFG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~s  445 (535)
T 2h8h_A          371 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVA--DFGLARLIEDNEYTARQGAKFPIKWTAPEAALYG---RFTIKS  445 (535)
T ss_dssp             HHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEEC--CTTSTTTCCCHHHHTTCSTTSCGGGSCHHHHHHC---CCCHHH
T ss_pred             HHHHHHHHHHhCCeeCCCCCHhhEEEcCCCcEEEc--ccccceecCCCceecccCCcCcccccCHHHhccC---CCCchh
Confidence            34567899999999999999999999999988888  99998433        223456789999998764   456899


Q ss_pred             hHHHHHHHHHHHHh-CCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHhhhh
Q psy12581         76 DMWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKMK  152 (153)
Q Consensus        76 dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~~~~  152 (153)
                      |+||||+++|++++ |..||.+....+....+ ..+...+.+..++..+.+++.+||+.||++|||++++++.|+.+.
T Consensus       446 DvwSlGv~l~el~t~g~~P~~~~~~~~~~~~i-~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~  522 (535)
T 2h8h_A          446 DVWSFGILLTELTTKGRVPYPGMVNREVLDQV-ERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYF  522 (535)
T ss_dssp             HHHHHHHHHHHHTTTTCCSSTTCCHHHHHHHH-HTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSS
T ss_pred             hHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH-HcCCCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHh
Confidence            99999999999999 99999887766655443 455566677889999999999999999999999999999998874

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=99.96  E-value=4.3e-29  Score=168.62  Aligned_cols=143  Identities=20%  Similarity=0.257  Sum_probs=113.4

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc----------CCcccCCcccCccccccCCCCCCcch
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ----------RGRCYYPAWMSPEALQKKPGDRNLEA   74 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~----------~~~~~~~~~~~pe~~~~~~~~~~~~~   74 (153)
                      ..-++.|||++++.|+||++.||+++.++.+|+.  |||++...          ....++..|++||.+.+.   .++.+
T Consensus       123 i~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~kl~--Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~  197 (295)
T 3ugc_A          123 ICKGMEYLGTKRYIHRDLATRNILVENENRVKIG--DFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTES---KFSVA  197 (295)
T ss_dssp             HHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEEC--CCCSCC-------------CTTCGGGGCCHHHHHHC---CCCHH
T ss_pred             HHHHHHHHhcCCcccCCCCHhhEEEcCCCeEEEc--cCcccccccCCcceeeeccCCCCccceeCcHHhcCC---CCChH
Confidence            4557899999999999999999999999988888  99998432          122456679999998764   45589


Q ss_pred             hhHHHHHHHHHHHHhCCCCCCCCCchh---------------hhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCC
Q psy12581         75 CDMWSFAVLLWELATREVPFADLTPME---------------VGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRP  139 (153)
Q Consensus        75 ~dv~s~g~~~~~~~~g~~p~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp  139 (153)
                      +|+||+|++++++++|..|+.......               ............+.+..++..+.+++.+||+.||++||
T Consensus       198 ~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rp  277 (295)
T 3ugc_A          198 SDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRP  277 (295)
T ss_dssp             HHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSC
T ss_pred             HHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHHHHHHHhccCcCCCCcCcCHHHHHHHHHHcCCChhhCC
Confidence            999999999999999998875421110               11122334445666778999999999999999999999


Q ss_pred             CHHHHHHHHhhhh
Q psy12581        140 TFDMVLPILDKMK  152 (153)
Q Consensus       140 s~~~~l~~L~~~~  152 (153)
                      |+.++++.|+++.
T Consensus       278 s~~el~~~L~~l~  290 (295)
T 3ugc_A          278 SFRDLALRVDQIR  290 (295)
T ss_dssp             CHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHH
Confidence            9999999999875

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=99.96  E-value=1.2e-28  Score=168.31  Aligned_cols=135  Identities=22%  Similarity=0.304  Sum_probs=114.5

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc----CCcccCCcccCccccccCCCCCCcchhhHHHH
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ----RGRCYYPAWMSPEALQKKPGDRNLEACDMWSF   80 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~----~~~~~~~~~~~pe~~~~~~~~~~~~~~dv~s~   80 (153)
                      ..-++.|||++++.|+||++.||+++.+|.+|+.  |||++...    ...+||+.|+|||.+.+.   .++.++|+||+
T Consensus       115 i~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~--Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~Diwsl  189 (318)
T 1fot_A          115 VCLALEYLHSKDIIYRDLKPENILLDKNGHIKIT--DFGFAKYVPDVTYTLCGTPDYIAPEVVSTK---PYNKSIDWWSF  189 (318)
T ss_dssp             HHHHHHHHHTTTEECCCCCGGGEEECTTSCEEEC--CCSSCEECSSCBCCCCSCTTTCCHHHHTTC---CBCTTHHHHHH
T ss_pred             HHHHHHHHHHCCccccCCChheEEEcCCCCEEEe--ecCcceecCCccccccCCccccCHhHhcCC---CCCcccchhhh
Confidence            4567899999999999999999999999999888  99998433    345789999999998764   34588999999


Q ss_pred             HHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCC-----CHHHHHH
Q psy12581         81 AVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRP-----TFDMVLP  146 (153)
Q Consensus        81 g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----s~~~~l~  146 (153)
                      |+++|++++|..||.+.........+....  ...|...+..+.+++.+||..||++||     +++++++
T Consensus       190 G~il~ell~g~~pf~~~~~~~~~~~i~~~~--~~~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~  258 (318)
T 1fot_A          190 GILIYEMLAGYTPFYDSNTMKTYEKILNAE--LRFPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKN  258 (318)
T ss_dssp             HHHHHHHHHSSCTTCCSSHHHHHHHHHHCC--CCCCTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHT
T ss_pred             HHHHHHHHhCCCCCCCCCHHHHHHHHHhCC--CCCCCCCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhc
Confidence            999999999999998877766666665543  445778899999999999999999999     7888763

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=99.96  E-value=1.1e-28  Score=166.31  Aligned_cols=142  Identities=23%  Similarity=0.346  Sum_probs=116.8

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccccC----------CcccCCcccCccccccCCCCCCcch
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQR----------GRCYYPAWMSPEALQKKPGDRNLEA   74 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~----------~~~~~~~~~~pe~~~~~~~~~~~~~   74 (153)
                      ..-++.|||++++.|+||.+.||+++.++.+++.  |||++....          ...+++.|++||.+.+.   .++.+
T Consensus       126 i~~~l~~LH~~~i~H~dikp~Nil~~~~~~~kl~--Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~  200 (291)
T 1xbb_A          126 VSMGMKYLEESNFVHRDLAARNVLLVTQHYAKIS--DFGLSKALRADENYYKAQTHGKWPVKWYAPECINYY---KFSSK  200 (291)
T ss_dssp             HHHHHHHHHHTTEECSCCSGGGEEEEETTEEEEC--CCTTCEECCTTCSEEEC----CCCGGGCCHHHHHHC---EEEHH
T ss_pred             HHHHHHHHHhCCeEcCCCCcceEEEeCCCcEEEc--cCCcceeeccCCCcccccccCCCCceeeChHHhccC---CCChh
Confidence            3457899999999999999999999999988888  999884321          12355789999998754   34589


Q ss_pred             hhHHHHHHHHHHHHh-CCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHhhhh
Q psy12581         75 CDMWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKMK  152 (153)
Q Consensus        75 ~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~~~~  152 (153)
                      +|+||+|++++++++ |..||.+......... .........+...+..+.+++.+||..||++||++.++++.|+++.
T Consensus       201 ~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~  278 (291)
T 1xbb_A          201 SDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAM-LEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYY  278 (291)
T ss_dssp             HHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHH-HHTTCCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHH-HHcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence            999999999999999 9999988776554433 3344456667788999999999999999999999999999998863

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.96  E-value=2.3e-28  Score=167.74  Aligned_cols=142  Identities=25%  Similarity=0.460  Sum_probs=114.5

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccccC----------CcccCCcccCccccccCCCCCCcch
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQR----------GRCYYPAWMSPEALQKKPGDRNLEA   74 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~----------~~~~~~~~~~pe~~~~~~~~~~~~~   74 (153)
                      ..-++.|||++++.|+||.+.||+++.++.+|+.  |||.+....          ...+++.|++||.+.+.   .++.+
T Consensus       156 i~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~--Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~  230 (333)
T 1mqb_A          156 IAAGMKYLANMNYVHRDLAARNILVNSNLVCKVS--DFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYR---KFTSA  230 (333)
T ss_dssp             HHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEEC--CCCC-----------------CCCGGGSCHHHHHSC---CCCHH
T ss_pred             HHHHHHHHHhCCeeCCCCChheEEECCCCcEEEC--CCCcchhhccccccccccCCCCccccccCchhcccC---CCCch
Confidence            3456899999999999999999999999988888  999984321          12346689999998754   45589


Q ss_pred             hhHHHHHHHHHHHHh-CCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHhhhh
Q psy12581         75 CDMWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKMK  152 (153)
Q Consensus        75 ~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~~~~  152 (153)
                      +|+||+|++++++++ |..||.+.........+ ..+...+.+...+..+.+++.+||+.+|++||++.++++.|+++.
T Consensus       231 ~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~  308 (333)
T 1mqb_A          231 SDVWSFGIVMWEVMTYGERPYWELSNHEVMKAI-NDGFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLI  308 (333)
T ss_dssp             HHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHH-HTTCCCCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHH
T ss_pred             hhhHHHHHHHHHHHcCCCCCcccCCHHHHHHHH-HCCCcCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence            999999999999998 99999887665554433 344455667778999999999999999999999999999998763

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=99.95  E-value=1.9e-28  Score=166.99  Aligned_cols=145  Identities=17%  Similarity=0.209  Sum_probs=111.3

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc------------CCcccCCcccCccccccCC-----
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ------------RGRCYYPAWMSPEALQKKP-----   67 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~------------~~~~~~~~~~~pe~~~~~~-----   67 (153)
                      ..-++.|||++++.|+||.+.||+++ ++.+++.  |||++...            ....+++.|++||.+....     
T Consensus       139 i~~al~~lH~~~i~H~dlkp~NIl~~-~~~~~l~--Dfg~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~  215 (319)
T 2y4i_B          139 IVKGMGYLHAKGILHKDLKSKNVFYD-NGKVVIT--DFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEE  215 (319)
T ss_dssp             HHHHHHHHHHTTCCCCCCCSTTEEEC---CCEEC--CCSCCC----------CCSCBCCSGGGGTSCHHHHSCBSCC--C
T ss_pred             HHHHHHHHHhCCccccCCChhhEEEe-CCCEEEe--ecCCccccccccccccccccccCCCcccccChHHhhhccccccc
Confidence            44578999999999999999999998 5667776  99986321            2235788999999987521     


Q ss_pred             -CCCCcchhhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581         68 -GDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus        68 -~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                       ...++.++|+||+|++++++++|..||...........+.........+...+..+.+++.+||..+|++|||+.++++
T Consensus       216 ~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~  295 (319)
T 2y4i_B          216 DKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIWQMGTGMKPNLSQIGMGKEISDILLFCWAFEQEERPTFTKLMD  295 (319)
T ss_dssp             CCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHHHHHHHHTTCCCCCCCSSCCTTHHHHHHHHHCSSTTTSCCHHHHHH
T ss_pred             cccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhccCCCCCCCcCCCCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence             1235689999999999999999999998877665554443332222223357789999999999999999999999999


Q ss_pred             HHhhhh
Q psy12581        147 ILDKMK  152 (153)
Q Consensus       147 ~L~~~~  152 (153)
                      .|+++.
T Consensus       296 ~l~~l~  301 (319)
T 2y4i_B          296 MLEKLP  301 (319)
T ss_dssp             HHTTC-
T ss_pred             HHHHHH
Confidence            999875

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=99.95  E-value=2.9e-28  Score=164.75  Aligned_cols=142  Identities=26%  Similarity=0.450  Sum_probs=114.7

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc-----------CCcccCCcccCccccccCCCCCCcc
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ-----------RGRCYYPAWMSPEALQKKPGDRNLE   73 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~-----------~~~~~~~~~~~pe~~~~~~~~~~~~   73 (153)
                      ..-++.|||++++.|+||++.||+++.++.+|+.  |||.+...           ....+++.|++||.+.+.   .++.
T Consensus       137 l~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~--Dfg~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~  211 (298)
T 3f66_A          137 VAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVA--DFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQ---KFTT  211 (298)
T ss_dssp             HHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEEC--SCGGGCCCSCGGGCBC-----CCBCGGGSCHHHHHHC---CCCH
T ss_pred             HHHHHHHHHhCCccCCCCchheEEECCCCCEEEC--cccccccccccchhccccccCCCCCccccChHHhcCC---CCCh
Confidence            3457899999999999999999999999988888  99998432           223456789999998764   3558


Q ss_pred             hhhHHHHHHHHHHHHh-CCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHhhhh
Q psy12581         74 ACDMWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKMK  152 (153)
Q Consensus        74 ~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~~~~  152 (153)
                      ++|+||+|++++++++ +.+||.+........... .......+...+..+.+++.+||..+|++|||+.++++.|+++.
T Consensus       212 ~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~  290 (298)
T 3f66_A          212 KSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL-QGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIF  290 (298)
T ss_dssp             HHHHHHHHHHHHHHHTTSCCSSTTSCTTTHHHHHH-TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHh-cCCCCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence            9999999999999999 666776665555444333 34445556778999999999999999999999999999998874

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.95  E-value=1.3e-28  Score=165.73  Aligned_cols=142  Identities=21%  Similarity=0.294  Sum_probs=117.5

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc----------CCcccCCcccCccccccCCCCCCcch
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ----------RGRCYYPAWMSPEALQKKPGDRNLEA   74 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~----------~~~~~~~~~~~pe~~~~~~~~~~~~~   74 (153)
                      ..-++.|||++++.|+||.+.||+++.++.+++.  |||.+...          ....+++.|++||.+.+.   .++.+
T Consensus       119 i~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~--Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~  193 (287)
T 1u59_A          119 VSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKIS--DFGLSKALGADDSYYTARSAGKWPLKWYAPECINFR---KFSSR  193 (287)
T ss_dssp             HHHHHHHHHHTTEECCCCSGGGEEEEETTEEEEC--CCTTCEECTTCSCEECCCCSSCCCGGGCCHHHHHHC---EECHH
T ss_pred             HHHHHHHHHHCCEeeCCCchheEEEcCCCCEEEC--cccceeeeccCcceeeccccccccccccCHHHhccC---CCCch
Confidence            3457899999999999999999999999988888  99988432          122456789999998754   34589


Q ss_pred             hhHHHHHHHHHHHHh-CCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHhhhh
Q psy12581         75 CDMWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKMK  152 (153)
Q Consensus        75 ~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~~~~  152 (153)
                      +|+||+|++++++++ |..||.+.........+ ..+.....+...+..+.+++.+||..+|++||++.++++.|+.+.
T Consensus       194 ~Di~slG~il~ellt~g~~p~~~~~~~~~~~~i-~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~  271 (287)
T 1u59_A          194 SDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFI-EQGKRMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACY  271 (287)
T ss_dssp             HHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHHH-HTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHcCCCCCcccCCHHHHHHHH-hcCCcCCCCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence            999999999999998 99999887665554433 344456667789999999999999999999999999999998763

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=99.95  E-value=3.1e-28  Score=172.70  Aligned_cols=136  Identities=18%  Similarity=0.236  Sum_probs=111.5

Q ss_pred             hhHHhhhhcCCCCCCCeeeeeeeecc---ccchhhccccccccccc-------CCcccCCcccCccccccCCCCCCcchh
Q psy12581          6 IVYSFYLNSKKSKTSNAFLFCCQIDE---DLTARINMADAQFSFQQ-------RGRCYYPAWMSPEALQKKPGDRNLEAC   75 (153)
Q Consensus         6 ~~~~~~lh~~~i~~~ni~~~~~~~~~---~~~~kl~~~d~g~~~~~-------~~~~~~~~~~~pe~~~~~~~~~~~~~~   75 (153)
                      .-++.|||+++|.|+||++.||+++.   ++.+|+.  |||++...       ....||+.|+|||.+.+.   .++.++
T Consensus       120 l~aL~~lH~~givHrDlKp~NIll~~~~~~~~vkL~--DFG~a~~~~~~~~~~~~~~gt~~Y~APE~l~~~---~~~~~~  194 (444)
T 3soa_A          120 LEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLA--DFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKD---PYGKPV  194 (444)
T ss_dssp             HHHHHHHHHTTCBCCCCSSTTEEESBSSTTCCEEEC--CCSSCBCCCTTCCBCCCSCSCGGGCCHHHHTTC---CBCTHH
T ss_pred             HHHHHHHHHCCccccCCCHHHEEEeccCCCCcEEEc--cCceeEEecCCCceeecccCCcccCCHHHhcCC---CCCCcc
Confidence            45689999999999999999999984   4667777  99998432       234789999999998764   345899


Q ss_pred             hHHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCC--CCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581         76 DMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIP--PGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus        76 dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      |+||+|+++|++++|..||.+.........+.......+.+  ...++.+.+++.+||+.||++|||+.++++
T Consensus       195 DIwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~  267 (444)
T 3soa_A          195 DLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPSKRITAAEALK  267 (444)
T ss_dssp             HHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCCCTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             ccHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhCCCCCCccccccCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence            99999999999999999998887776666655544433332  367899999999999999999999999985

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=99.95  E-value=9.8e-29  Score=171.90  Aligned_cols=132  Identities=18%  Similarity=0.213  Sum_probs=112.0

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccc-------cCCcccCCcccCccccccCCCCCCcchhhH
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQ-------QRGRCYYPAWMSPEALQKKPGDRNLEACDM   77 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~-------~~~~~~~~~~~~pe~~~~~~~~~~~~~~dv   77 (153)
                      ..-++.|||++++.|+||++.||+++.+|.+||.  |||++..       ....+||+.|++||.+.+.   .++.++|+
T Consensus       148 i~~aL~~LH~~givHrDlkp~NIll~~~g~ikL~--DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~Di  222 (373)
T 2r5t_A          148 IASALGYLHSLNIVYRDLKPENILLDSQGHIVLT--DFGLCKENIEHNSTTSTFCGTPEYLAPEVLHKQ---PYDRTVDW  222 (373)
T ss_dssp             HHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEEC--CCCBCGGGBCCCCCCCSBSCCCCCCCHHHHTTC---CCCTHHHH
T ss_pred             HHHHHHHHHHCCceecCCCHHHEEECCCCCEEEe--eCccccccccCCCccccccCCccccCHHHhCCC---CCCchhhh
Confidence            4567899999999999999999999999998888  9999843       1345789999999998864   34589999


Q ss_pred             HHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHH
Q psy12581         78 WSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDM  143 (153)
Q Consensus        78 ~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~  143 (153)
                      ||+|+++|++++|..||.+.........+....  ...+...+..+.+++.+||+.||++||++.+
T Consensus       223 wslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~--~~~~~~~~~~~~~li~~lL~~dp~~R~~~~~  286 (373)
T 2r5t_A          223 WCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKP--LQLKPNITNSARHLLEGLLQKDRTKRLGAKD  286 (373)
T ss_dssp             HHHHHHHHHHHHSSCTTCCSBHHHHHHHHHHSC--CCCCSSSCHHHHHHHHHHTCSSGGGSTTTTT
T ss_pred             HHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcc--cCCCCCCCHHHHHHHHHHcccCHHhCCCCCC
Confidence            999999999999999998877776666665543  3456778999999999999999999999753

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=99.95  E-value=3.8e-29  Score=172.41  Aligned_cols=134  Identities=22%  Similarity=0.300  Sum_probs=113.0

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc-------CCcccCCcccCccccccCCCCCCcchhhH
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ-------RGRCYYPAWMSPEALQKKPGDRNLEACDM   77 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~-------~~~~~~~~~~~pe~~~~~~~~~~~~~~dv   77 (153)
                      ..-++.|||++++.|+||++.||+++.+|.+|+.  |||++...       ...+||+.|+|||.+.+.   .++.++|+
T Consensus       127 i~~aL~~LH~~~ivHrDlkp~NIll~~~g~vkL~--DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~Di  201 (345)
T 1xjd_A          127 IILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIA--DFGMCKENMLGDAKTNTFCGTPDYIAPEILLGQ---KYNHSVDW  201 (345)
T ss_dssp             HHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEEC--CCTTCBCCCCTTCCBCCCCSCGGGCCHHHHTTC---CBCTHHHH
T ss_pred             HHHHHHHHHHCCeEeCCCChhhEEECCCCCEEEe--EChhhhhcccCCCcccCCCCCcccCChhhhcCC---CCCChhhh
Confidence            4567899999999999999999999999998888  99988432       345789999999999864   34589999


Q ss_pred             HHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHH-HHH
Q psy12581         78 WSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFD-MVL  145 (153)
Q Consensus        78 ~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~-~~l  145 (153)
                      ||+|+++|++++|..||.+.........+...  ....|...+..+.+++.+||+.||++||++. +++
T Consensus       202 wslG~il~ell~g~~Pf~~~~~~~~~~~i~~~--~~~~p~~~s~~~~~li~~lL~~dp~~R~~~~~~i~  268 (345)
T 1xjd_A          202 WSFGVLLYEMLIGQSPFHGQDEEELFHSIRMD--NPFYPRWLEKEAKDLLVKLFVREPEKRLGVRGDIR  268 (345)
T ss_dssp             HHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC--CCCCCTTSCHHHHHHHHHHSCSSGGGSBTTBSCGG
T ss_pred             HHHHHHHHHHhcCCCCCCCCCHHHHHHHHHhC--CCCCCcccCHHHHHHHHHHhcCCHhHcCCChHHHH
Confidence            99999999999999999887776666555544  3445777899999999999999999999986 554

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=99.95  E-value=2.2e-28  Score=166.96  Aligned_cols=141  Identities=30%  Similarity=0.453  Sum_probs=116.5

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc---------CCcccCCcccCccccccCCCCCCcchh
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ---------RGRCYYPAWMSPEALQKKPGDRNLEAC   75 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~---------~~~~~~~~~~~pe~~~~~~~~~~~~~~   75 (153)
                      ..-++.|||++++.|+||++.||+++.++.+|+.  |||.+...         ....+++.|++||.+.+.   .++.++
T Consensus       147 i~~~l~~lH~~~i~H~dikp~NIli~~~~~~kl~--Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~  221 (322)
T 1p4o_A          147 IADGMAYLNANKFVHRDLAARNCMVAEDFTVKIG--DFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDG---VFTTYS  221 (322)
T ss_dssp             HHHHHHHHHHTTCBCSCCSGGGEEECTTCCEEEC--CTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHC---CCCHHH
T ss_pred             HHHHHHHHHHCCCccCCCccceEEEcCCCeEEEC--cCccccccccccccccccCCCCCCCccChhhhccC---CCCchh
Confidence            3457899999999999999999999999988888  99987422         223457789999998764   355899


Q ss_pred             hHHHHHHHHHHHHh-CCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHhhh
Q psy12581         76 DMWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKM  151 (153)
Q Consensus        76 dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~~~  151 (153)
                      |+||+|++++++++ |..||.+.........+. .......+...+..+.+++.+||+.+|++|||+.++++.|+++
T Consensus       222 Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~  297 (322)
T 1p4o_A          222 DVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVM-EGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEE  297 (322)
T ss_dssp             HHHHHHHHHHHHHHTSCCTTTTSCHHHHHHHHH-TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGG
T ss_pred             hHHHHHHHHHHHHhcCCCccccCCHHHHHHHHH-cCCcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHh
Confidence            99999999999999 899998876655544443 3334455677899999999999999999999999999999876

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=99.95  E-value=1.2e-28  Score=172.21  Aligned_cols=138  Identities=16%  Similarity=0.105  Sum_probs=109.3

Q ss_pred             hhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc----------------------------CCcccCCcc
Q psy12581          6 IVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ----------------------------RGRCYYPAW   57 (153)
Q Consensus         6 ~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~----------------------------~~~~~~~~~   57 (153)
                      .-++.|||++++.|+||++.||+++.++.+|+.  |||++...                            ...+||+.|
T Consensus       119 ~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~--DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y  196 (388)
T 3oz6_A          119 IKVIKYLHSGGLLHRDMKPSNILLNAECHVKVA--DFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWY  196 (388)
T ss_dssp             HHHHHHHHHTTEECCCCCGGGEEECTTCCEEEC--CCTTCEESSSCCCCCCCGGGCCC---------------CCCGGGG
T ss_pred             HHHHHHHHhCCEEeCCCCHHHeEEcCCCCEEec--CCcccccccccccccccccccccccccccccccccccCCcccCCc
Confidence            457899999999999999999999999998888  99998432                            223789999


Q ss_pred             cCccccccCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhcccc------------------------
Q psy12581         58 MSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRI------------------------  113 (153)
Q Consensus        58 ~~pe~~~~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~------------------------  113 (153)
                      +|||.+.+.  ..++.++|+||+|++++++++|+.||.+.........+......+                        
T Consensus       197 ~aPE~~~~~--~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~  274 (388)
T 3oz6_A          197 RAPEILLGS--TKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKV  274 (388)
T ss_dssp             CCHHHHTTC--CCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHC
T ss_pred             CCHHHhcCC--CCCCChhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCcccc
Confidence            999998752  245689999999999999999999998877665554443210000                        


Q ss_pred             ---------------------CCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHH
Q psy12581        114 ---------------------TIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPI  147 (153)
Q Consensus       114 ---------------------~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~  147 (153)
                                           ..+...++.+.+++.+||+.||++|||++++++.
T Consensus       275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP~~R~t~~e~l~H  329 (388)
T 3oz6_A          275 EIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPNKRISANDALKH  329 (388)
T ss_dssp             C-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSSGGGSCCHHHHTTS
T ss_pred             cccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhccCcccCCCHHHHhCC
Confidence                                 0122568899999999999999999999999753

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=99.95  E-value=1.7e-28  Score=167.97  Aligned_cols=141  Identities=28%  Similarity=0.423  Sum_probs=115.6

Q ss_pred             hhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc------CCcccCCcccCccccccCCCCCCcchhhHHH
Q psy12581          6 IVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ------RGRCYYPAWMSPEALQKKPGDRNLEACDMWS   79 (153)
Q Consensus         6 ~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~------~~~~~~~~~~~pe~~~~~~~~~~~~~~dv~s   79 (153)
                      .-++.|||++++.|+||.+.||+++.++.+|+.  |||++...      ....+++.|++||.+.+.   .++.++|+||
T Consensus       152 ~~aL~~LH~~~ivH~dlkp~NIl~~~~~~~kL~--Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~s  226 (327)
T 1fvr_A          152 ARGMDYLSQKQFIHRDLAARNILVGENYVAKIA--DFGLSRGQEVYVKKTMGRLPVRWMAIESLNYS---VYTTNSDVWS  226 (327)
T ss_dssp             HHHHHHHHHTTEECSCCSGGGEEECGGGCEEEC--CTTCEESSCEECCC----CCTTTCCHHHHHHC---EECHHHHHHH
T ss_pred             HHHHHHHHhCCccCCCCccceEEEcCCCeEEEc--ccCcCccccccccccCCCCCccccChhhhccc---cCCchhcchH
Confidence            457899999999999999999999999988888  99988422      223567789999998754   3458999999


Q ss_pred             HHHHHHHHHh-CCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHhhhh
Q psy12581         80 FAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKMK  152 (153)
Q Consensus        80 ~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~~~~  152 (153)
                      +|++++++++ |..||.+.........+ ..+.....+...+..+.+++.+||..+|++|||++++++.|+++.
T Consensus       227 lG~il~ellt~g~~pf~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~  299 (327)
T 1fvr_A          227 YGVLLWEIVSLGGTPYCGMTCAELYEKL-PQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML  299 (327)
T ss_dssp             HHHHHHHHHTTSCCTTTTCCHHHHHHHG-GGTCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHcCCCCCCCCCcHHHHHHHh-hcCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence            9999999998 99999887765554433 344455667788999999999999999999999999999998763

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=99.95  E-value=1.2e-28  Score=170.23  Aligned_cols=135  Identities=24%  Similarity=0.301  Sum_probs=114.3

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc----CCcccCCcccCccccccCCCCCCcchhhHHHH
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ----RGRCYYPAWMSPEALQKKPGDRNLEACDMWSF   80 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~----~~~~~~~~~~~pe~~~~~~~~~~~~~~dv~s~   80 (153)
                      ..-++.|||++++.|+||++.||+++.+|.+||.  |||++...    ...+||+.|++||.+.+.   .++.++|+||+
T Consensus       150 i~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~--DFg~a~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~Diwsl  224 (350)
T 1rdq_E          150 IVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVT--DFGFAKRVKGRTWTLCGTPEALAPEIILSK---GYNKAVDWWAL  224 (350)
T ss_dssp             HHHHHHHHHHTTEECCCCSGGGEEECTTSCEEEC--CCTTCEECSSCBCCCEECGGGCCHHHHTTC---CBCTHHHHHHH
T ss_pred             HHHHHHHHHHCCcccccCccceEEECCCCCEEEc--ccccceeccCCcccccCCccccCHHHhcCC---CCCCcCCEecc
Confidence            3557899999999999999999999999998888  99998533    345789999999998764   34589999999


Q ss_pred             HHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCC-----HHHHHH
Q psy12581         81 AVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPT-----FDMVLP  146 (153)
Q Consensus        81 g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps-----~~~~l~  146 (153)
                      |+++|++++|..||.+.........+...  ....|...+..+.+++.+||+.||++||+     ++++++
T Consensus       225 G~il~ell~g~~Pf~~~~~~~~~~~i~~~--~~~~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~  293 (350)
T 1rdq_E          225 GVLIYEMAAGYPPFFADQPIQIYEKIVSG--KVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN  293 (350)
T ss_dssp             HHHHHHHHHSSCSSCCSSHHHHHHHHHHC--CCCCCTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred             cHhHhHHhhCCCCCCCCCHHHHHHHHHcC--CCCCCCCCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHh
Confidence            99999999999999887766666555544  34557788999999999999999999998     777764

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=99.95  E-value=3e-29  Score=170.49  Aligned_cols=143  Identities=22%  Similarity=0.293  Sum_probs=112.3

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccccC---------------------CcccCCcccCcccc
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQR---------------------GRCYYPAWMSPEAL   63 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~---------------------~~~~~~~~~~pe~~   63 (153)
                      ..-++.|||++++.|+||++.||+++.++.+|+.  |||.+....                     ...||+.|++||.+
T Consensus       117 i~~al~~lH~~~ivH~dlkp~Nil~~~~~~~kl~--Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~  194 (310)
T 3s95_A          117 IASGMAYLHSMNIIHRDLNSHNCLVRENKNVVVA--DFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMI  194 (310)
T ss_dssp             HHHHHHHHHHTTEECSCCSTTSEEECTTSCEEEC--CCTTCEECC--------------------CCCCSCGGGCCHHHH
T ss_pred             HHHHHHHHHhCCccCCCCCcCeEEECCCCCEEEe--ecccceecccccccccccccccccccccccccCCCcceeCHHHh
Confidence            4457899999999999999999999999998888  999984321                     34688999999999


Q ss_pred             ccCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCchhhhH-HHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHH
Q psy12581         64 QKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGM-KVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFD  142 (153)
Q Consensus        64 ~~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~  142 (153)
                      .+.   .++.++|+||+|+++|++++|..|+.......... ...........+..+++.+.+++.+||+.||++|||+.
T Consensus       195 ~~~---~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~  271 (310)
T 3s95_A          195 NGR---SYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLDRYCPPNCPPSFFPITVRCCDLDPEKRPSFV  271 (310)
T ss_dssp             TTC---CCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCHHHHHHHTCCTTCCTTHHHHHHHHTCSSGGGSCCHH
T ss_pred             cCC---CCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhhhhccccccCCCCCCHHHHHHHHHHccCChhhCcCHH
Confidence            764   45589999999999999999999886533222110 00111112233566788899999999999999999999


Q ss_pred             HHHHHHhhhh
Q psy12581        143 MVLPILDKMK  152 (153)
Q Consensus       143 ~~l~~L~~~~  152 (153)
                      ++++.|++++
T Consensus       272 ~l~~~L~~l~  281 (310)
T 3s95_A          272 KLEHWLETLR  281 (310)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHH
Confidence            9999999875

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=99.95  E-value=2.5e-28  Score=173.38  Aligned_cols=135  Identities=21%  Similarity=0.340  Sum_probs=114.6

Q ss_pred             hhhHHhhhhc-CCCCCCCeeeeeeeeccccchhhccccccccccc-------CCcccCCcccCccccccCCCCCCcchhh
Q psy12581          5 KIVYSFYLNS-KKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ-------RGRCYYPAWMSPEALQKKPGDRNLEACD   76 (153)
Q Consensus         5 ~~~~~~~lh~-~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~-------~~~~~~~~~~~pe~~~~~~~~~~~~~~d   76 (153)
                      ..-++.|||+ ++|.|+||++.||+++.++.+||.  |||++...       ...+||+.|+|||.+.+.   .++.++|
T Consensus       257 i~~aL~~LH~~~giiHrDlkp~NIll~~~~~~kl~--DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~D  331 (446)
T 4ejn_A          257 IVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKIT--DFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDN---DYGRAVD  331 (446)
T ss_dssp             HHHHHHHHHHHTCCCCCCCCGGGEEECSSSCEEEC--CCCCCCTTCC-----CCSSSCGGGCCHHHHHTS---CCCTHHH
T ss_pred             HHHHHHHHhhcCCEEECCCCHHHEEECCCCCEEEc--cCCCceeccCCCcccccccCCccccCHhhcCCC---CCCCccc
Confidence            4557899998 999999999999999999988888  99988432       345789999999998764   4558999


Q ss_pred             HHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCC-----CHHHHHH
Q psy12581         77 MWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRP-----TFDMVLP  146 (153)
Q Consensus        77 v~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----s~~~~l~  146 (153)
                      +||+|++++++++|..||.+.........+...  ....|...++.+.+++.+||+.||++||     +++++++
T Consensus       332 iwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~--~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~  404 (446)
T 4ejn_A          332 WWGLGVVMYEMMCGRLPFYNQDHEKLFELILME--EIRFPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQ  404 (446)
T ss_dssp             HHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC--CCCCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred             hhhhHHHHHHHhhCCCCCCCCCHHHHHHHHHhC--CCCCCccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHh
Confidence            999999999999999999887776666555544  3445777899999999999999999999     9999875

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=99.95  E-value=1.2e-28  Score=168.94  Aligned_cols=142  Identities=17%  Similarity=0.192  Sum_probs=97.3

Q ss_pred             hhhHHhhhhcCC--CCCCCeeeeeeeeccccchhhcccccccccccC-------------------CcccCCcccCcccc
Q psy12581          5 KIVYSFYLNSKK--SKTSNAFLFCCQIDEDLTARINMADAQFSFQQR-------------------GRCYYPAWMSPEAL   63 (153)
Q Consensus         5 ~~~~~~~lh~~~--i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~-------------------~~~~~~~~~~pe~~   63 (153)
                      ..-++.|||+++  +.|+||++.||+++.++.+||.  |||.+....                   ...+++.|++||.+
T Consensus       145 i~~~l~~LH~~~~~ivH~Dikp~NIl~~~~~~~kl~--Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~  222 (337)
T 3ll6_A          145 TCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLC--DFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEII  222 (337)
T ss_dssp             HHHHHHHHHTSSSCCBCCCCCGGGCEECTTSCEEBC--CCTTCBCCSSCC------------------------------
T ss_pred             HHHHHHHHHhCCCCEEEccCCcccEEECCCCCEEEe--cCccceeccccCcccccccccccchhhccccCCCCcCChhhh
Confidence            345789999999  9999999999999999988888  999984332                   33588899999998


Q ss_pred             ccCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHH
Q psy12581         64 QKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDM  143 (153)
Q Consensus        64 ~~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~  143 (153)
                      .......++.++|+||+|+++|++++|..||........    .......+.+...+..+.+++.+||+.||++|||+.+
T Consensus       223 ~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~----~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e  298 (337)
T 3ll6_A          223 DLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLRI----VNGKYSIPPHDTQYTVFHSLIRAMLQVNPEERLSIAE  298 (337)
T ss_dssp             -CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC----------------CCCCTTCCSSGGGHHHHHHHSCSSGGGSCCHHH
T ss_pred             hccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHHHh----hcCcccCCcccccchHHHHHHHHHccCChhhCcCHHH
Confidence            533334567899999999999999999999976543332    2233334445566778999999999999999999999


Q ss_pred             HHHHHhhhh
Q psy12581        144 VLPILDKMK  152 (153)
Q Consensus       144 ~l~~L~~~~  152 (153)
                      +++.|+.+.
T Consensus       299 ~l~~l~~~~  307 (337)
T 3ll6_A          299 VVHQLQEIA  307 (337)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHH
Confidence            999998764

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=99.95  E-value=1.7e-28  Score=166.66  Aligned_cols=137  Identities=15%  Similarity=0.056  Sum_probs=110.1

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc------CCcccCCcccCccccccCCCCCCcchhhHH
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ------RGRCYYPAWMSPEALQKKPGDRNLEACDMW   78 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~------~~~~~~~~~~~pe~~~~~~~~~~~~~~dv~   78 (153)
                      ..-++.|||++++.|+||++.||+++.++.+||.  |||.+...      ....+|+.|++||.+.+.   .++.++|+|
T Consensus       129 i~~al~~lH~~~ivH~Dlkp~Nil~~~~~~~kl~--Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~Diw  203 (308)
T 3g33_A          129 FLRGLDFLHANCIVHRDLKPENILVTSGGTVKLA--DFGLARIYSYQMALTPVVVTLWYRAPEVLLQS---TYATPVDMW  203 (308)
T ss_dssp             HHHHHHHHHHTTCCCSCCCTTTEEECTTSCEEEC--SCSCTTTSTTCCCSGGGGCCCSSCCHHHHHTS---CCCSTHHHH
T ss_pred             HHHHHHHHHHCCcccCCCCHHHEEEcCCCCEEEe--eCccccccCCCcccCCccccccccCchHHcCC---CCCchHHHH
Confidence            3457899999999999999999999999988888  99998432      234678999999998764   345889999


Q ss_pred             HHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccC-------------------------CCCCCCHHHHHHHHHHhcC
Q psy12581         79 SFAVLLWELATREVPFADLTPMEVGMKVALEGLRIT-------------------------IPPGISSHLSKLIRICMNE  133 (153)
Q Consensus        79 s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~~l~~~cl~~  133 (153)
                      |+|+++|++++|..||.+.........+......++                         .....+..+.+++.+||+.
T Consensus       204 slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  283 (308)
T 3g33_A          204 SVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTF  283 (308)
T ss_dssp             HHHHHHHHTTTSSCSCCCSSHHHHHHHHHHHHCCCCTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCS
T ss_pred             HHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcC
Confidence            999999999999999988776666555433211000                         1134678999999999999


Q ss_pred             CCCCCCCHHHHHH
Q psy12581        134 DPGKRPTFDMVLP  146 (153)
Q Consensus       134 ~p~~Rps~~~~l~  146 (153)
                      ||++|||+.++++
T Consensus       284 dP~~R~t~~e~l~  296 (308)
T 3g33_A          284 NPHKRISAFRALQ  296 (308)
T ss_dssp             STTTSCCHHHHHT
T ss_pred             CCccCCCHHHHhc
Confidence            9999999999875

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=99.95  E-value=2.5e-28  Score=170.32  Aligned_cols=139  Identities=19%  Similarity=0.235  Sum_probs=110.9

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc------CCcccCCcccCccccccCCCCCCcchhhHH
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ------RGRCYYPAWMSPEALQKKPGDRNLEACDMW   78 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~------~~~~~~~~~~~pe~~~~~~~~~~~~~~dv~   78 (153)
                      ..-++.|||+++|.|+||++.||+++.+|.+||.  |||++...      ...+||+.|+|||.+.......++.++|+|
T Consensus       124 i~~aL~~LH~~givHrDlkp~NIll~~~g~vkL~--DFG~a~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~Diw  201 (384)
T 4fr4_A          124 LVMALDYLQNQRIIHRDMKPDNILLDEHGHVHIT--DFNIAAMLPRETQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWW  201 (384)
T ss_dssp             HHHHHHHHHHTTEECCCCSGGGEEECTTSCEEEC--CCTTCEECCTTCCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHH
T ss_pred             HHHHHHHHHHCCceeccCcHHHeEECCCCCEEEe--ccceeeeccCCCceeccCCCccccCCeeeccCCCCCCCccceee
Confidence            4567899999999999999999999999999888  99998432      345799999999998754434466899999


Q ss_pred             HHHHHHHHHHhCCCCCCCCCchhhh--HHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCC-HHHHHH
Q psy12581         79 SFAVLLWELATREVPFADLTPMEVG--MKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPT-FDMVLP  146 (153)
Q Consensus        79 s~g~~~~~~~~g~~p~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps-~~~~l~  146 (153)
                      |+|+++|++++|..||.........  .... .......|..++..+.+++.+||+.||++||+ ++++++
T Consensus       202 SlG~il~elltG~~Pf~~~~~~~~~~~~~~~-~~~~~~~p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~  271 (384)
T 4fr4_A          202 SLGVTAYELLRGRRPYHIRSSTSSKEIVHTF-ETTVVTYPSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQN  271 (384)
T ss_dssp             HHHHHHHHHHHSSCSSCCCTTSCHHHHHHHH-HHCCCCCCTTSCHHHHHHHHHHSCSSGGGSCCSHHHHHT
T ss_pred             chHHHHHHHHhCCCCCCCCCCccHHHHHHHH-hhcccCCCCcCCHHHHHHHHHHhcCCHhHhcccHHHHHc
Confidence            9999999999999999754332221  1111 22345567789999999999999999999998 776653

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=99.95  E-value=4.6e-28  Score=163.16  Aligned_cols=138  Identities=14%  Similarity=0.130  Sum_probs=107.0

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc-------CCcccCCcccCccccccCCCCCCcchhhH
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ-------RGRCYYPAWMSPEALQKKPGDRNLEACDM   77 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~-------~~~~~~~~~~~pe~~~~~~~~~~~~~~dv   77 (153)
                      ..-++.|||++++.|+||++.||+++.++.+|+.  |||.+...       ....+++.|+|||.+.+.  ..++.++|+
T Consensus       109 i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~--Dfg~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~--~~~~~~~Di  184 (288)
T 1ob3_A          109 LLNGIAYCHDRRVLHRDLKPQNLLINREGELKIA--DFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGS--KKYSTTIDI  184 (288)
T ss_dssp             HHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEEC--CTTHHHHHCC---------CCCTTCCHHHHTTC--CSCCTHHHH
T ss_pred             HHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEEe--ECccccccCccccccccccccccccCchheeCC--CCCCcHHHH
Confidence            3457899999999999999999999999998888  99988432       234678999999998653  235689999


Q ss_pred             HHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhcccc---------------------------CCCCCCCHHHHHHHHHH
Q psy12581         78 WSFAVLLWELATREVPFADLTPMEVGMKVALEGLRI---------------------------TIPPGISSHLSKLIRIC  130 (153)
Q Consensus        78 ~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~~~~l~~~c  130 (153)
                      ||+|++++++++|..||.+.........+......+                           ......+..+.+++.+|
T Consensus       185 wslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  264 (288)
T 1ob3_A          185 WSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKM  264 (288)
T ss_dssp             HHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHCCCChhhchhhhcccccccccccccCccHHHHhhhcCHHHHHHHHHH
Confidence            999999999999999998876655544433210000                           01234678999999999


Q ss_pred             hcCCCCCCCCHHHHHH
Q psy12581        131 MNEDPGKRPTFDMVLP  146 (153)
Q Consensus       131 l~~~p~~Rps~~~~l~  146 (153)
                      |+.||++|||++++++
T Consensus       265 L~~dP~~Rpt~~e~l~  280 (288)
T 1ob3_A          265 LKLDPNQRITAKQALE  280 (288)
T ss_dssp             TCSSTTTSCCHHHHHT
T ss_pred             cCCCcccCCCHHHHhc
Confidence            9999999999999875

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=99.95  E-value=3.9e-28  Score=163.31  Aligned_cols=142  Identities=25%  Similarity=0.431  Sum_probs=117.8

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccccC--------CcccCCcccCccccccCCCCCCcchhh
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQR--------GRCYYPAWMSPEALQKKPGDRNLEACD   76 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~--------~~~~~~~~~~pe~~~~~~~~~~~~~~d   76 (153)
                      ..-++.|||++++.|+||.+.||+++.++.+++.  |||.+....        ...+++.|++||.+.+.   .++.++|
T Consensus       120 i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~l~--Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~D  194 (288)
T 3kfa_A          120 ISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVA--DFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYN---KFSIKSD  194 (288)
T ss_dssp             HHHHHHHHHHHTCCCSCCSGGGEEECGGGCEEEC--CCCGGGTSCSSSSEEETTEEECGGGCCHHHHHHC---CCCHHHH
T ss_pred             HHHHHHHHHHCCccCCCCCcceEEEcCCCCEEEc--cCccceeccCCccccccCCccccCcCChhhhccC---CCCchhh
Confidence            3457899999999999999999999999988888  999984332        22456789999998764   3558999


Q ss_pred             HHHHHHHHHHHHh-CCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHhhhh
Q psy12581         77 MWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKMK  152 (153)
Q Consensus        77 v~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~~~~  152 (153)
                      +||+|++++++++ |..||.+........ ..........+...+..+.+++.+||..||++|||+.++++.|+.+.
T Consensus       195 i~slG~il~~ll~~g~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~  270 (288)
T 3kfa_A          195 VWAFGVLLWEIATYGMSPYPGIDLSQVYE-LLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF  270 (288)
T ss_dssp             HHHHHHHHHHHHTTSCCSSTTCCGGGHHH-HHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhCCCCCCCCCCHHHHHH-HHhccCCCCCCCCCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHHH
Confidence            9999999999999 999998776555443 34455566667788999999999999999999999999999998763

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=99.95  E-value=2.6e-29  Score=171.71  Aligned_cols=146  Identities=20%  Similarity=0.214  Sum_probs=108.5

Q ss_pred             hhhHHhhhhcC----------CCCCCCeeeeeeeeccccchhhccccccccccc---------CCcccCCcccCcccccc
Q psy12581          5 KIVYSFYLNSK----------KSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ---------RGRCYYPAWMSPEALQK   65 (153)
Q Consensus         5 ~~~~~~~lh~~----------~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~---------~~~~~~~~~~~pe~~~~   65 (153)
                      ..-++.|||++          ++.|+||++.||+++.++.+||.  |||++...         ....+|+.|++||.+.+
T Consensus       130 i~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~--DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  207 (322)
T 3soc_A          130 MARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIA--DFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEG  207 (322)
T ss_dssp             HHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEEC--CCTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTT
T ss_pred             HHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEEc--cCCcccccccccCccccccCccCccccCHhhccc
Confidence            34578899998          99999999999999999998888  99998332         22468999999999875


Q ss_pred             CCC--CCCcchhhHHHHHHHHHHHHhCCCCCCCCCchh---------------hhHH-HHhhccccCCCC-----CCCHH
Q psy12581         66 KPG--DRNLEACDMWSFAVLLWELATREVPFADLTPME---------------VGMK-VALEGLRITIPP-----GISSH  122 (153)
Q Consensus        66 ~~~--~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~---------------~~~~-~~~~~~~~~~~~-----~~~~~  122 (153)
                      ...  ..++.++|+||+|+++|++++|+.||.+.....               .... .......+..+.     ..+..
T Consensus       208 ~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  287 (322)
T 3soc_A          208 AINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAM  287 (322)
T ss_dssp             CCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHH
T ss_pred             ccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhccCCchhhhhhhhhcccCCCCccccccccchHHH
Confidence            321  123467899999999999999999997543211               1111 111111222221     12345


Q ss_pred             HHHHHHHHhcCCCCCCCCHHHHHHHHhhhh
Q psy12581        123 LSKLIRICMNEDPGKRPTFDMVLPILDKMK  152 (153)
Q Consensus       123 ~~~l~~~cl~~~p~~Rps~~~~l~~L~~~~  152 (153)
                      +.+++.+||+.||++|||+.++++.|+++.
T Consensus       288 l~~li~~cl~~dP~~Rps~~ell~~L~~l~  317 (322)
T 3soc_A          288 LCETIEECWDHDAEARLSAGCVGERITQMQ  317 (322)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence            999999999999999999999999999885

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=99.95  E-value=2e-28  Score=168.08  Aligned_cols=142  Identities=27%  Similarity=0.411  Sum_probs=117.2

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc---------CCcccCCcccCccccccCCCCCCcchh
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ---------RGRCYYPAWMSPEALQKKPGDRNLEAC   75 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~---------~~~~~~~~~~~pe~~~~~~~~~~~~~~   75 (153)
                      ..-++.|||++++.|+||++.||+++.++.+|+.  |||.+...         ....+++.|++||.+.+.   .++.++
T Consensus       166 i~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~--Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~  240 (334)
T 2pvf_A          166 LARGMEYLASQKCIHRDLAARNVLVTENNVMKIA--DFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDR---VYTHQS  240 (334)
T ss_dssp             HHHHHHHHHHTTEECSCCSGGGEEECTTCCEEEC--CCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHC---EECHHH
T ss_pred             HHHHHHHHHhCCeeCCCCccceEEEcCCCCEEEc--cccccccccccccccccCCCCcccceeChHHhcCC---CcChHH
Confidence            3457899999999999999999999999988888  99988432         223456789999998754   345899


Q ss_pred             hHHHHHHHHHHHHh-CCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHhhhh
Q psy12581         76 DMWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKMK  152 (153)
Q Consensus        76 dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~~~~  152 (153)
                      |+||+|++++++++ |..||.+......... .........+...+..+.+++.+||..+|++|||+.++++.|+++.
T Consensus       241 Di~slG~il~ellt~g~~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~  317 (334)
T 2pvf_A          241 DVWSFGVLMWEIFTLGGSPYPGIPVEELFKL-LKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL  317 (334)
T ss_dssp             HHHHHHHHHHHHHTTSCCSSTTCCHHHHHHH-HHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCCCCCcCcCCHHHHHHH-HhcCCCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence            99999999999999 9999987765554433 3344455667788999999999999999999999999999998874

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=99.95  E-value=5.7e-28  Score=169.00  Aligned_cols=139  Identities=17%  Similarity=0.236  Sum_probs=109.2

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc---------CCcccCCcccCccccccCC--------
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ---------RGRCYYPAWMSPEALQKKP--------   67 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~---------~~~~~~~~~~~pe~~~~~~--------   67 (153)
                      ..-++.|||+++|.|+||++.||+++ ++.+||.  |||++...         ....||+.|+|||.+.+..        
T Consensus       164 i~~aL~~lH~~~ivHrDlkp~NIll~-~~~~kl~--DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~  240 (390)
T 2zmd_A          164 MLEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLI--DFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKS  240 (390)
T ss_dssp             HHHHHHHHHTTTCCCCCCCGGGEEES-SSCEEEC--CCSSSCCC---------CCSCCCGGGCCHHHHHCC---------
T ss_pred             HHHHHHHHHHCCeeecCCCHHHEEEE-CCeEEEE--ecCccccccCCCccccCCCCCcCCCccChHHhhhcccccccccc
Confidence            34578999999999999999999996 4667777  99998432         2347899999999986421        


Q ss_pred             CCCCcchhhHHHHHHHHHHHHhCCCCCCCCCch-hhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581         68 GDRNLEACDMWSFAVLLWELATREVPFADLTPM-EVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus        68 ~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      ...++.++|+||+|+++|++++|..||...... .....+.........+...+..+.+++.+||+.||++|||+.++++
T Consensus       241 ~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~  320 (390)
T 2zmd_A          241 KSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLA  320 (390)
T ss_dssp             ---CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             ccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHHHHHHHHhCccccCCCCccchHHHHHHHHHHcccChhhCCCHHHHhh
Confidence            124668999999999999999999999775433 3333444444455567777899999999999999999999999975

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=99.95  E-value=3.9e-28  Score=164.05  Aligned_cols=143  Identities=18%  Similarity=0.177  Sum_probs=113.8

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc--------CCcccCCcccCccccccCCCCCCcchhh
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ--------RGRCYYPAWMSPEALQKKPGDRNLEACD   76 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~--------~~~~~~~~~~~pe~~~~~~~~~~~~~~d   76 (153)
                      ..-++.|||++++.|+||++.||+++.++.+|+.  |||++...        ....|++.|++||.+.+.   ..+.++|
T Consensus       120 i~~~l~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~--Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~D  194 (294)
T 4eqm_A          120 ILDGIKHAHDMRIVHRDIKPQNILIDSNKTLKIF--DFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGE---ATDECTD  194 (294)
T ss_dssp             HHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEEC--CCSSSTTC-------------CCSSCCHHHHHTC---CCCTTHH
T ss_pred             HHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEE--eCCCccccccccccccCccccCccccCHhHhcCC---CCCchHh
Confidence            3457889999999999999999999999988888  99988432        223689999999998864   3457899


Q ss_pred             HHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccc---cCCCCCCCHHHHHHHHHHhcCCCCCCC-CHHHHHHHHhhhh
Q psy12581         77 MWSFAVLLWELATREVPFADLTPMEVGMKVALEGLR---ITIPPGISSHLSKLIRICMNEDPGKRP-TFDMVLPILDKMK  152 (153)
Q Consensus        77 v~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~cl~~~p~~Rp-s~~~~l~~L~~~~  152 (153)
                      +||+|+++|++++|+.||.+................   ...+...+..+.+++.+||+.||++|| +++++.+.|+.+.
T Consensus       195 i~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~  274 (294)
T 4eqm_A          195 IYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQDSVPNVTTDVRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVL  274 (294)
T ss_dssp             HHHHHHHHHHHHHSSCSSCSSCHHHHHHHHHSSCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSS
T ss_pred             HHHHHHHHHHHHhCCCCCCCCChHHHHHHHhhccCCCcchhcccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHH
Confidence            999999999999999999887766554444433221   123456889999999999999999998 8999999998763

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=99.95  E-value=1.4e-28  Score=181.96  Aligned_cols=135  Identities=21%  Similarity=0.334  Sum_probs=115.3

Q ss_pred             chhhHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccc-------cCCcccCCcccCccccccCCCCCCcchhh
Q psy12581          4 KKIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQ-------QRGRCYYPAWMSPEALQKKPGDRNLEACD   76 (153)
Q Consensus         4 ~~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~-------~~~~~~~~~~~~pe~~~~~~~~~~~~~~d   76 (153)
                      ....++.|||+++|+|+||++.||+++.++.+||.  |||++..       ....+||+.|+|||++.+.   .++.++|
T Consensus       450 qi~~aL~~LH~~gIiHrDLKp~NILl~~~g~ikL~--DFGla~~~~~~~~~~~~~~GT~~Y~APE~l~~~---~~~~~~D  524 (674)
T 3pfq_A          450 EIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIA--DFGMCKENIWDGVTTKTFCGTPDYIAPEIIAYQ---PYGKSVD  524 (674)
T ss_dssp             HHHHHHHHHHHTSEECCCCCSTTEEECSSSCEEEC--CCTTCEECCCTTCCBCCCCSCSSSCCHHHHTCC---CBSTHHH
T ss_pred             HHHHHHHHHHhCCeEeccCChhhEEEcCCCcEEEe--ecceeeccccCCcccccccCCCcccCHhhhcCC---CCCccce
Confidence            34568899999999999999999999999999888  9999843       2345799999999999764   4558999


Q ss_pred             HHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCH-----HHHH
Q psy12581         77 MWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTF-----DMVL  145 (153)
Q Consensus        77 v~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~-----~~~l  145 (153)
                      +||+|+++||+++|..||.+.........+...  ....|..++.++.+++.+||+.||++|+++     ++++
T Consensus       525 vwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~--~~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~  596 (674)
T 3pfq_A          525 WWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEH--NVAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIK  596 (674)
T ss_dssp             HHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHSS--CCCCCTTSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHH
T ss_pred             EechHHHHHHHHcCCCCCCCCCHHHHHHHHHhC--CCCCCccCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHh
Confidence            999999999999999999988877777666654  345677899999999999999999999987     6655

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=99.95  E-value=2.8e-28  Score=163.45  Aligned_cols=142  Identities=25%  Similarity=0.434  Sum_probs=116.9

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc--------CCcccCCcccCccccccCCCCCCcchhh
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ--------RGRCYYPAWMSPEALQKKPGDRNLEACD   76 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~--------~~~~~~~~~~~pe~~~~~~~~~~~~~~d   76 (153)
                      ..-++.|||++++.|+||.+.||+++.++.+++.  |||.+...        ....++..|++||.+.+.   .++.++|
T Consensus       118 i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~--Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~D  192 (279)
T 1qpc_A          118 IAEGMAFIEERNYIHRDLRAANILVSDTLSCKIA--DFGLARLIEDNEYTAREGAKFPIKWTAPEAINYG---TFTIKSD  192 (279)
T ss_dssp             HHHHHHHHHHTTEECSCCSGGGEEECTTSCEEEC--CCTTCEECSSSCEECCTTCCCCTTTSCHHHHHHC---EECHHHH
T ss_pred             HHHHHHHHHHCCeeccCCCHhhEEEcCCCCEEEC--CCcccccccCcccccccCCCCccCccChhhhccC---CCCchhh
Confidence            3457899999999999999999999999988888  99998432        123456789999998753   3458999


Q ss_pred             HHHHHHHHHHHHh-CCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHhhhh
Q psy12581         77 MWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKMK  152 (153)
Q Consensus        77 v~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~~~~  152 (153)
                      +||+|++++++++ |..||.+.........+ ........+...+..+.+++.+||..+|++|||+.++++.|+++.
T Consensus       193 i~slG~il~el~~~g~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~  268 (279)
T 1qpc_A          193 VWSFGILLTEIVTHGRIPYPGMTNPEVIQNL-ERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFF  268 (279)
T ss_dssp             HHHHHHHHHHHHTTTCCSSTTCCHHHHHHHH-HTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHhCCCCCCcccCHHHHHHHH-hcccCCCCcccccHHHHHHHHHHhccChhhCCCHHHHHHHHHHHH
Confidence            9999999999999 99999887765554443 344455567778999999999999999999999999999998763

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=99.95  E-value=3.3e-28  Score=167.46  Aligned_cols=141  Identities=20%  Similarity=0.215  Sum_probs=110.8

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc-----------CCcccCCcccCccccccCCCCCCcc
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ-----------RGRCYYPAWMSPEALQKKPGDRNLE   73 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~-----------~~~~~~~~~~~pe~~~~~~~~~~~~   73 (153)
                      ..-++.|||++++.|+||.+.||+++.++...+++.|||.+...           ....+++.|++||.+.+.. ..++.
T Consensus       177 i~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~  255 (345)
T 3hko_A          177 IFSALHYLHNQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTN-ESYGP  255 (345)
T ss_dssp             HHHHHHHHHHTTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSS-SCCCT
T ss_pred             HHHHHHHHHHCCccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCC-CCCCc
Confidence            34578999999999999999999999887433344499988421           3346889999999986431 24568


Q ss_pred             hhhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCCC--CCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581         74 ACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPP--GISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus        74 ~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      ++|+||+|+++|++++|..||.+.........+.........+.  ..++.+.+++.+||+.+|++||++.++++
T Consensus       256 ~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~  330 (345)
T 3hko_A          256 KCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCFENPNYNVLSPLARDLLSNLLNRNVDERFDAMRALQ  330 (345)
T ss_dssp             HHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCTTSGGGGGSCHHHHHHHHHHSCSCTTTSCCHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHhcccccCCcccccCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence            99999999999999999999988877776666655544333332  47899999999999999999999999986

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=99.95  E-value=3.2e-28  Score=168.69  Aligned_cols=137  Identities=18%  Similarity=0.176  Sum_probs=110.8

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeecccc----chhhccccccccccc------CCcccCCcccCccccccCCCCCCcch
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDL----TARINMADAQFSFQQ------RGRCYYPAWMSPEALQKKPGDRNLEA   74 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~----~~kl~~~d~g~~~~~------~~~~~~~~~~~pe~~~~~~~~~~~~~   74 (153)
                      ..-++.|||++++.|+||++.||+++.++    .+|+.  |||++...      ...+||+.|+|||.+.+.   .++.+
T Consensus       124 i~~aL~~LH~~givHrDlkp~NIll~~~~~~~~~vkl~--DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~  198 (361)
T 2yab_A          124 ILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLI--DFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYE---PLGLE  198 (361)
T ss_dssp             HHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEEC--CCSSCEECCTTCCCCCCCSCGGGCCHHHHTTC---CCCTH
T ss_pred             HHHHHHHHHHCCcccCCCCHHHEEEeCCCCCccCEEEE--ecCCceEcCCCCccccCCCCccEECchHHcCC---CCCcc
Confidence            34578999999999999999999998776    46666  99998432      345789999999998764   34589


Q ss_pred             hhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccC--CCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581         75 CDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRIT--IPPGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus        75 ~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      +|+||+|+++|++++|..||.+.........+.......+  .+...+..+.+++.+||..||++|||+.++++
T Consensus       199 ~DiwslGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~  272 (361)
T 2yab_A          199 ADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALR  272 (361)
T ss_dssp             HHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             ccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCchhccCCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence            9999999999999999999988776666655544332221  22467899999999999999999999999874

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=99.95  E-value=2.8e-28  Score=166.59  Aligned_cols=136  Identities=18%  Similarity=0.305  Sum_probs=109.7

Q ss_pred             hhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc-------CCcccCCcccCccccccCCCCCCcchhhHH
Q psy12581          6 IVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ-------RGRCYYPAWMSPEALQKKPGDRNLEACDMW   78 (153)
Q Consensus         6 ~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~-------~~~~~~~~~~~pe~~~~~~~~~~~~~~dv~   78 (153)
                      .-++.|||++++.|+||.+.||+++.++.+|+.  |||++...       ....||+.|++||.+.+.   .++.++|+|
T Consensus       151 ~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~--Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~Dv~  225 (321)
T 2c30_A          151 LQALAYLHAQGVIHRDIKSDSILLTLDGRVKLS--DFGFCAQISKDVPKRKSLVGTPYWMAPEVISRS---LYATEVDIW  225 (321)
T ss_dssp             HHHHHHHHHTTEECCCCSGGGEEECTTCCEEEC--CCTTCEECCSSSCCBCCCCSCGGGCCHHHHTTC---CBCTHHHHH
T ss_pred             HHHHHHHHHCCeecCCCCHHHEEECCCCcEEEe--eeeeeeecccCccccccccCCccccCHhhhcCC---CCCchhhHH
Confidence            456899999999999999999999999988888  99987432       234789999999998764   355899999


Q ss_pred             HHHHHHHHHHhCCCCCCCCCchhhhHHHHhhcc-ccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581         79 SFAVLLWELATREVPFADLTPMEVGMKVALEGL-RITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus        79 s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      |+|++++++++|..||.+.........+..... ....+...++.+.+++.+||+.||++|||+.++++
T Consensus       226 slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~  294 (321)
T 2c30_A          226 SLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKLKNSHKVSPVLRDFLERMLVRDPQERATAQELLD  294 (321)
T ss_dssp             HHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSSCCCCTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             HHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCcCccccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            999999999999999987766555444332211 12223457889999999999999999999999986

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=99.95  E-value=6.1e-28  Score=168.94  Aligned_cols=130  Identities=19%  Similarity=0.305  Sum_probs=105.8

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccc-------cCCcccCCcccCccccccCCCCCCcchhhH
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQ-------QRGRCYYPAWMSPEALQKKPGDRNLEACDM   77 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~-------~~~~~~~~~~~~pe~~~~~~~~~~~~~~dv   77 (153)
                      ...++.|||+++|.|+||++.||+++.+|.+||.  |||++..       ....+||+.|+|||.+.+.   .++.++|+
T Consensus       162 i~~aL~~LH~~givHrDLKp~NILl~~~g~ikL~--DFGla~~~~~~~~~~~~~~gt~~Y~aPE~l~~~---~~~~~~Di  236 (396)
T 4dc2_A          162 ISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLT--DYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGE---DYGFSVDW  236 (396)
T ss_dssp             HHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEEC--CCTTCBCCCCTTCCBCCCCBCGGGCCHHHHTTC---CBCTHHHH
T ss_pred             HHHHHHHHHHCCEEeccCCHHHEEECCCCCEEEe--ecceeeecccCCCccccccCCcccCCchhhcCC---CCChHHHH
Confidence            4567899999999999999999999999999988  9999843       2345899999999999864   34589999


Q ss_pred             HHHHHHHHHHHhCCCCCCCCCc--------hh-hhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCH
Q psy12581         78 WSFAVLLWELATREVPFADLTP--------ME-VGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTF  141 (153)
Q Consensus        78 ~s~g~~~~~~~~g~~p~~~~~~--------~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~  141 (153)
                      ||+|+++|++++|..||.....        .. ....+..  .....|...+..+.+++.+||+.||++||++
T Consensus       237 wslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~--~~~~~p~~~s~~~~~li~~lL~~dP~~R~~~  307 (396)
T 4dc2_A          237 WALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILE--KQIRIPRSLSVKAASVLKSFLNKDPKERLGC  307 (396)
T ss_dssp             HHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHH--CCCCCCTTSCHHHHHHHHHHTCSCTTTSTTC
T ss_pred             HHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhc--cccCCCCcCCHHHHHHHHHHhcCCHhHcCCC
Confidence            9999999999999999964321        11 2222222  2455678899999999999999999999985

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=99.95  E-value=7.1e-28  Score=163.97  Aligned_cols=138  Identities=15%  Similarity=0.103  Sum_probs=108.5

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc-------CCcccCCcccCccccccCCCCCCcchhhH
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ-------RGRCYYPAWMSPEALQKKPGDRNLEACDM   77 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~-------~~~~~~~~~~~pe~~~~~~~~~~~~~~dv   77 (153)
                      ..-++.|||++++.|+||++.||+++.++.+|+.  |||++...       ....+++.|++||.+.+.  ..++.++|+
T Consensus       128 i~~~l~~LH~~~ivH~Dikp~NIl~~~~~~~kl~--Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~--~~~~~~~Di  203 (311)
T 3niz_A          128 LLRGVAHCHQHRILHRDLKPQNLLINSDGALKLA--DFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGS--KKYSTSVDI  203 (311)
T ss_dssp             HHHHHHHHHHTTEECCCCCGGGEEECTTCCEEEC--CCTTCEETTSCCC---CCCCCCTTCCHHHHTTC--CSCCTHHHH
T ss_pred             HHHHHHHHHHCCcccCCCchHhEEECCCCCEEEc--cCcCceecCCCcccccCCcccCCcCCHHHhcCC--CCCCchHHh
Confidence            3457899999999999999999999999988888  99998432       234678999999998653  234589999


Q ss_pred             HHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhcccc----------------------------CCCCCCCHHHHHHHHH
Q psy12581         78 WSFAVLLWELATREVPFADLTPMEVGMKVALEGLRI----------------------------TIPPGISSHLSKLIRI  129 (153)
Q Consensus        78 ~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~----------------------------~~~~~~~~~~~~l~~~  129 (153)
                      ||+|++++++++|..||.+.........+......+                            ......++++.+++.+
T Consensus       204 wslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  283 (311)
T 3niz_A          204 WSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSN  283 (311)
T ss_dssp             HHHHHHHHHHHHSSCSCCCSSTTTHHHHHHHHHCCCCTTTSGGGTTSHHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHH
T ss_pred             HHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHCCCChHHhhhhhccchhhhcccccccCCcHHHhCcccCHHHHHHHHH
Confidence            999999999999999998766655544433211000                            0112357889999999


Q ss_pred             HhcCCCCCCCCHHHHHH
Q psy12581        130 CMNEDPGKRPTFDMVLP  146 (153)
Q Consensus       130 cl~~~p~~Rps~~~~l~  146 (153)
                      ||+.||++|||++++++
T Consensus       284 ~L~~dP~~Rpt~~ell~  300 (311)
T 3niz_A          284 MLCFDPNKRISARDAMN  300 (311)
T ss_dssp             HSCSCTTTSCCHHHHHT
T ss_pred             HcCCChhHCCCHHHHhc
Confidence            99999999999999986

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=99.95  E-value=7.3e-28  Score=164.94  Aligned_cols=135  Identities=16%  Similarity=0.222  Sum_probs=111.9

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc-------CCcccCCcccCccccccCCCCCCcchhhH
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ-------RGRCYYPAWMSPEALQKKPGDRNLEACDM   77 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~-------~~~~~~~~~~~pe~~~~~~~~~~~~~~dv   77 (153)
                      ..-++.|||++++.|+||++.||+++.++.+||.  |||++...       ...+|++.|++||.+.+.   .++.++|+
T Consensus       130 i~~al~~lH~~~ivH~Dlkp~Nill~~~~~~kl~--Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~Di  204 (327)
T 3a62_A          130 ISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLT--DFGLCKESIHDGTVTHTFCGTIEYMAPEILMRS---GHNRAVDW  204 (327)
T ss_dssp             HHHHHHHHHHTTCCCCCCCTTTEEECTTSCEEEC--CCSCC----------CTTSSCCTTSCHHHHTTS---CCCTHHHH
T ss_pred             HHHHHHHHHhCCEEcccCCHHHeEECCCCcEEEE--eCCcccccccCCccccccCCCcCccCHhhCcCC---CCCCcccc
Confidence            3457899999999999999999999999988888  99987432       234789999999998764   34589999


Q ss_pred             HHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCC-----CHHHHHH
Q psy12581         78 WSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRP-----TFDMVLP  146 (153)
Q Consensus        78 ~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----s~~~~l~  146 (153)
                      ||+|+++|++++|..||.+.........+...  ....|...+..+.+++.+||..||++||     +++++++
T Consensus       205 wslG~il~el~~g~~pf~~~~~~~~~~~i~~~--~~~~p~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~  276 (327)
T 3a62_A          205 WSLGALMYDMLTGAPPFTGENRKKTIDKILKC--KLNLPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQA  276 (327)
T ss_dssp             HHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHT--CCCCCTTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHH
T ss_pred             hhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhC--CCCCCCCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHc
Confidence            99999999999999999887766666555544  3445777899999999999999999999     6777764

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=99.95  E-value=3.6e-28  Score=167.86  Aligned_cols=144  Identities=13%  Similarity=0.089  Sum_probs=110.7

Q ss_pred             chhhHHhhhhcCCCCCCCeeeeeeeecccc--chhhccccccccccc--------------CCcccCCcccCccccccCC
Q psy12581          4 KKIVYSFYLNSKKSKTSNAFLFCCQIDEDL--TARINMADAQFSFQQ--------------RGRCYYPAWMSPEALQKKP   67 (153)
Q Consensus         4 ~~~~~~~~lh~~~i~~~ni~~~~~~~~~~~--~~kl~~~d~g~~~~~--------------~~~~~~~~~~~pe~~~~~~   67 (153)
                      ...-++.|||++++.|+||++.||+++.++  .+|+.  |||++...              ....+++.|++||.+.+. 
T Consensus       167 qi~~~L~~LH~~~ivH~Dikp~NIl~~~~~~~~~kl~--Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-  243 (352)
T 2jii_A          167 RLLDALEFLHENEYVHGNVTAENIFVDPEDQSQVTLA--GYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGC-  243 (352)
T ss_dssp             HHHHHHHHHHHTTCBCSCCCGGGEEEETTEEEEEEEC--CGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTC-
T ss_pred             HHHHHHHHHHhCCccCCCCCHHHEEEcCCCCceEEEe--cCcceeeccCCCccccccccccccccCCccccCHHHHccC-
Confidence            345678999999999999999999999998  56666  99998432              223688999999998764 


Q ss_pred             CCCCcchhhHHHHHHHHHHHHhCCCCCCCCC-chhhhHHHHhh--ccccCCC------CCCCHHHHHHHHHHhcCCCCCC
Q psy12581         68 GDRNLEACDMWSFAVLLWELATREVPFADLT-PMEVGMKVALE--GLRITIP------PGISSHLSKLIRICMNEDPGKR  138 (153)
Q Consensus        68 ~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~-~~~~~~~~~~~--~~~~~~~------~~~~~~~~~l~~~cl~~~p~~R  138 (153)
                        .++.++|+||+|+++|++++|..||.... ...........  ......+      ...+..+.+++.+||..||++|
T Consensus       244 --~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R  321 (352)
T 2jii_A          244 --GPSRRSDLQSLGYCMLKWLYGFLPWTNCLPNTEDIMKQKQKFVDKPGPFVGPCGHWIRPSETLQKYLKVVMALTYEEK  321 (352)
T ss_dssp             --CCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHHHHHHHHHHHHHSCCCEECTTSCEECCCHHHHHHHHHHHTCCTTCC
T ss_pred             --CCCchhhHHHHHHHHHHHHhCCCCcccCCcCHHHHHHHHHhccCChhhhhhhccccCCCcHHHHHHHHHHHhCChhhC
Confidence              45689999999999999999999997754 22222221111  1111111      2468999999999999999999


Q ss_pred             CCHHHHHHHHhhhh
Q psy12581        139 PTFDMVLPILDKMK  152 (153)
Q Consensus       139 ps~~~~l~~L~~~~  152 (153)
                      ||++++++.|+++.
T Consensus       322 ps~~~l~~~L~~~~  335 (352)
T 2jii_A          322 PPYAMLRNNLEALL  335 (352)
T ss_dssp             CCHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHH
Confidence            99999999998764

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=99.95  E-value=6.2e-29  Score=170.77  Aligned_cols=136  Identities=23%  Similarity=0.273  Sum_probs=110.3

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc------CCcccCCcccCccccccCCCCCCcchhhHH
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ------RGRCYYPAWMSPEALQKKPGDRNLEACDMW   78 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~------~~~~~~~~~~~pe~~~~~~~~~~~~~~dv~   78 (153)
                      ..-++.|||++++.|+||++.||+++.++.+|+.  |||++...      ...+|++.|+|||.+.+...  .+.++|+|
T Consensus       117 i~~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~--DFG~s~~~~~~~~~~~~~gt~~y~aPE~~~~~~~--~~~~~Diw  192 (336)
T 3h4j_B          117 IICAIEYCHRHKIVHRDLKPENLLLDDNLNVKIA--DFGLSNIMTDGNFLKTSCGSPNYAAPEVINGKLY--AGPEVDVW  192 (336)
T ss_dssp             HHHHHHHHHHHTCCCCCCSTTTEEECTTCCEEEC--CSSCTBTTTTSBTTCCCTTSTTTSCGGGSCCSGG--GCHHHHHH
T ss_pred             HHHHHHHHHHCCeEecCCchhhEEEcCCCCEEEE--EeccceeccCCcccccccCCcCcCCHHHHcCCCC--CCCccchh
Confidence            3457899999999999999999999999998888  99988432      34578999999999876432  24789999


Q ss_pred             HHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581         79 SFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus        79 s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      |+|+++|++++|..||.+.........+.  ......|...++.+.+++.+||+.||.+|||++++++
T Consensus       193 slG~il~~ll~g~~Pf~~~~~~~~~~~i~--~~~~~~p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~  258 (336)
T 3h4j_B          193 SCGIVLYVMLVGRLPFDDEFIPNLFKKVN--SCVYVMPDFLSPGAQSLIRRMIVADPMQRITIQEIRR  258 (336)
T ss_dssp             HHHHHHHHHHHSSCSSBCSSSTTCBCCCC--SSCCCCCTTSCHHHHHHHHTTSCSSGGGSCCHHHHTT
T ss_pred             HHHHHHHHHHhCCCCCCCccHHHHHHHHH--cCCCCCcccCCHHHHHHHHHHcCCChhHCcCHHHHHh
Confidence            99999999999999997755444332221  2233457778999999999999999999999999874

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=99.95  E-value=2.4e-28  Score=165.39  Aligned_cols=144  Identities=22%  Similarity=0.303  Sum_probs=114.4

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc----------CCcccCCcccCccccccCCCCCCcch
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ----------RGRCYYPAWMSPEALQKKPGDRNLEA   74 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~----------~~~~~~~~~~~pe~~~~~~~~~~~~~   74 (153)
                      ..-++.|||++++.|+||.+.||+++.++.+++.  |||.+...          ....++..|++||.+.+.   .++.+
T Consensus       135 i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~--Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~  209 (302)
T 4e5w_A          135 ICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIG--DFGLTKAIETDKEYYTVKDDRDSPVFWYAPECLMQS---KFYIA  209 (302)
T ss_dssp             HHHHHHHHHHTTEECSCCSGGGEEEEETTEEEEC--CCTTCEECCTTCCEEECCCCTTCCGGGCCHHHHHHC---EEEHH
T ss_pred             HHHHHHHhhcCCcccCCCchheEEEcCCCCEEEC--cccccccccCCCcceeccCCCCCCccccCCeeecCC---CCCcc
Confidence            3457899999999999999999999999988888  99998432          233567789999998764   34588


Q ss_pred             hhHHHHHHHHHHHHhCCCCCCCC--------------CchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCC
Q psy12581         75 CDMWSFAVLLWELATREVPFADL--------------TPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPT  140 (153)
Q Consensus        75 ~dv~s~g~~~~~~~~g~~p~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps  140 (153)
                      +|+||+|++++++++|..|+...              ................+.+...+..+.+++.+||+.||++|||
T Consensus       210 ~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps  289 (302)
T 4e5w_A          210 SDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTS  289 (302)
T ss_dssp             HHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCC
T ss_pred             hhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHHHHHhccCCCCCCCCCCHHHHHHHHHHcCCCCCCCCC
Confidence            99999999999999998875321              1111222233344556667789999999999999999999999


Q ss_pred             HHHHHHHHhhhhC
Q psy12581        141 FDMVLPILDKMKR  153 (153)
Q Consensus       141 ~~~~l~~L~~~~~  153 (153)
                      +.++++.|+++.+
T Consensus       290 ~~~ll~~L~~ll~  302 (302)
T 4e5w_A          290 FQNLIEGFEALLK  302 (302)
T ss_dssp             HHHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHhC
Confidence            9999999998753

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=99.95  E-value=7e-28  Score=161.55  Aligned_cols=135  Identities=21%  Similarity=0.295  Sum_probs=111.5

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc-----CCcccCCcccCccccccCCCCCCcchhhHHH
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ-----RGRCYYPAWMSPEALQKKPGDRNLEACDMWS   79 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~-----~~~~~~~~~~~pe~~~~~~~~~~~~~~dv~s   79 (153)
                      ..-++.|||++++.|+||.+.||+++.++.+++.  |||++...     ....+++.|++||.+.+.   ..+.++|+||
T Consensus       118 i~~~l~~LH~~~i~H~dlkp~Nili~~~~~~~l~--Dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~s  192 (279)
T 3fdn_A          118 LANALSYCHSKRVIHRDIKPENLLLGSAGELKIA--DFGWSVHAPSSRRTDLCGTLDYLPPEMIEGR---MHDEKVDLWS  192 (279)
T ss_dssp             HHHHHHHHHTTTCEECCCCGGGEEECTTSCEEEC--SCCEESCC--------CCCCTTCCHHHHTTC---CCCTTHHHHH
T ss_pred             HHHHHHHHHhCCEecccCChHhEEEcCCCCEEEE--eccccccCCcccccccCCCCCccCHhHhccC---CCCccchhHh
Confidence            3457889999999999999999999999988888  99987433     334788999999998764   3457899999


Q ss_pred             HHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581         80 FAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus        80 ~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      +|++++++++|..||...........+...  ....|...+..+.+++.+||+.||++|||++++++
T Consensus       193 lG~il~~l~~g~~p~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~  257 (279)
T 3fdn_A          193 LGVLCYEFLVGKPPFEANTYQETYKRISRV--EFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE  257 (279)
T ss_dssp             HHHHHHHHHHSSCTTCCSSHHHHHHHHHHT--CCCCCTTSCHHHHHHHHHHCCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHHHCCCCCCCCcHHHHHHHHHhC--CCCCCCcCCHHHHHHHHHHhccChhhCCCHHHHhh
Confidence            999999999999999877665555444332  44557778999999999999999999999999985

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=99.95  E-value=7.1e-28  Score=167.01  Aligned_cols=140  Identities=21%  Similarity=0.240  Sum_probs=100.6

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc------CCcccCCcccCccccccCCCCCCcchhhHH
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ------RGRCYYPAWMSPEALQKKPGDRNLEACDMW   78 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~------~~~~~~~~~~~pe~~~~~~~~~~~~~~dv~   78 (153)
                      ..-++.|||++++.|+||++.||+++.++..++++.|||++...      ....||+.|++||.+.+....  +.++|+|
T Consensus       125 l~~~L~~LH~~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~--~~~~Diw  202 (361)
T 3uc3_A          125 LLSGVSYCHSMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLRQEYD--GKIADVW  202 (361)
T ss_dssp             HHHHHHHHHHTTCCSCCCCGGGEEECSSSSCCEEECCCCCC---------------CTTSCHHHHHCSSCC--HHHHHHH
T ss_pred             HHHHHHHHHHCCcccCCCCHHHEEEcCCCCceEEEeecCccccccccCCCCCCcCCCCcCChhhhcCCCCC--CCeeeee
Confidence            34578999999999999999999999887744444499987422      334789999999998764322  3458999


Q ss_pred             HHHHHHHHHHhCCCCCCCCCchhhhHH----HHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581         79 SFAVLLWELATREVPFADLTPMEVGMK----VALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus        79 s~g~~~~~~~~g~~p~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      |+|+++|++++|+.||.+.........    +.......+.....++.+.+++.+||+.||++|||+.++++
T Consensus       203 slG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~ell~  274 (361)
T 3uc3_A          203 SCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIPDDIRISPECCHLISRIFVADPATRISIPEIKT  274 (361)
T ss_dssp             HHHHHHHHHHHSSCSCC----CCCHHHHHHHHHTTCCCCCTTSCCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred             hhHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhcCCCCCCCcCCCCHHHHHHHHHHccCChhHCcCHHHHHh
Confidence            999999999999999987554333322    22233333334467899999999999999999999999985

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=99.95  E-value=1.6e-28  Score=172.63  Aligned_cols=140  Identities=19%  Similarity=0.228  Sum_probs=115.4

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc--------CCcccCCcccCccccccCCCC-CCcchh
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ--------RGRCYYPAWMSPEALQKKPGD-RNLEAC   75 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~--------~~~~~~~~~~~pe~~~~~~~~-~~~~~~   75 (153)
                      ...++.|||+++|.|+||++.||+++.+|.+||.  |||++...        ...+||+.|+|||.+.+.... .++.++
T Consensus       177 i~~aL~~LH~~givHrDLKp~NILl~~~g~ikL~--DFG~a~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~  254 (410)
T 3v8s_A          177 VVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLA--DFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGREC  254 (410)
T ss_dssp             HHHHHHHHHHTTEECCCCSGGGEEECTTSCEEEC--CCTTCEECCTTSEEECCSCCSCGGGCCHHHHHTTTTTCEEETHH
T ss_pred             HHHHHHHHHHCCeEeccCCHHHeeECCCCCEEEe--ccceeEeeccCCcccccCCcCCccccCHHHhhccCCCcCCCCcc
Confidence            4567899999999999999999999999999988  99998432        245799999999998764321 156899


Q ss_pred             hHHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCC--CCCCCHHHHHHHHHHhcCCCCC--CCCHHHHHH
Q psy12581         76 DMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITI--PPGISSHLSKLIRICMNEDPGK--RPTFDMVLP  146 (153)
Q Consensus        76 dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~cl~~~p~~--Rps~~~~l~  146 (153)
                      |+||+|+++|++++|..||.+.........+.........  ....+..+.+++.+||..+|.+  |++++++++
T Consensus       255 DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~  329 (410)
T 3v8s_A          255 DWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKR  329 (410)
T ss_dssp             HHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCCCCTTCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHT
T ss_pred             eEecchHHHHHHHhCCCCCCCCChhhHHHHHHhccccccCCCcccccHHHHHHHHHHccChhhhCCCCCHHHHhc
Confidence            9999999999999999999988877776666554322333  3468999999999999999988  999999875

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=99.95  E-value=9.1e-29  Score=171.95  Aligned_cols=140  Identities=16%  Similarity=0.104  Sum_probs=107.7

Q ss_pred             chhhHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccccC----CcccCCcccCccccccCCCCCCcchhhHHH
Q psy12581          4 KKIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQR----GRCYYPAWMSPEALQKKPGDRNLEACDMWS   79 (153)
Q Consensus         4 ~~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~----~~~~~~~~~~pe~~~~~~~~~~~~~~dv~s   79 (153)
                      ...-++.|||+++|.|+||++.||+++.++.+||.  |||++....    ...+++.|+|||.+.+.. ..++.++|+||
T Consensus       202 qi~~aL~~LH~~~ivHrDikp~NIll~~~~~~kL~--DFG~a~~~~~~~~~~~~t~~y~aPE~~~~~~-~~~~~~~DiwS  278 (371)
T 3q60_A          202 QLIRLAANLQSKGLVHGHFTPDNLFIMPDGRLMLG--DVSALWKVGTRGPASSVPVTYAPREFLNAST-ATFTHALNAWQ  278 (371)
T ss_dssp             HHHHHHHHHHHTTEEETTCSGGGEEECTTSCEEEC--CGGGEEETTCEEEGGGSCGGGCCHHHHTCSE-EECCHHHHHHH
T ss_pred             HHHHHHHHHHHCCCccCcCCHHHEEECCCCCEEEE--ecceeeecCCCccCccCCcCCcChhhccCCC-CCcCccccHHH
Confidence            34567899999999999999999999999998888  999985432    335679999999996511 13568999999


Q ss_pred             HHHHHHHHHhCCCCCCCCCchhhhH--H---H--HhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581         80 FAVLLWELATREVPFADLTPMEVGM--K---V--ALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus        80 ~g~~~~~~~~g~~p~~~~~~~~~~~--~---~--~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      +|+++|++++|+.||.+........  .   .  .......+.+...+..+.+++.+||+.||++|||+.++++
T Consensus       279 lG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  352 (371)
T 3q60_A          279 LGLSIYRVWCLFLPFGLVTPGIKGSWKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAME  352 (371)
T ss_dssp             HHHHHHHHHHSSCSTTBCCTTCTTCCCBCCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTT
T ss_pred             HHHHHHHHHhCCCCCCCcCcccccchhhhhhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence            9999999999999997764321110  0   0  0111122233468899999999999999999999999974

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=99.95  E-value=1.5e-27  Score=164.41  Aligned_cols=137  Identities=18%  Similarity=0.068  Sum_probs=109.1

Q ss_pred             hhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc-------CCcccCCcccCccccccCCCCCCcchhhHH
Q psy12581          6 IVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ-------RGRCYYPAWMSPEALQKKPGDRNLEACDMW   78 (153)
Q Consensus         6 ~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~-------~~~~~~~~~~~pe~~~~~~~~~~~~~~dv~   78 (153)
                      .-++.|||++++.|+||.+.||+++.++.+|+.  |||++...       ....+|+.|++||.+.+..  .++.++|+|
T Consensus       122 ~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~kl~--Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~--~~~~~~Diw  197 (346)
T 1ua2_A          122 LQGLEYLHQHWILHRDLKPNNLLLDENGVLKLA--DFGLAKSFGSPNRAYTHQVVTRWYRAPELLFGAR--MYGVGVDMW  197 (346)
T ss_dssp             HHHHHHHHHTTCCCCCCCGGGEEECTTCCEEEC--CCGGGSTTTSCCCCCCCSCCCCTTCCHHHHTTCS--CCCHHHHHH
T ss_pred             HHHHHHHHHCCEECCCCCHHHEEEcCCCCEEEE--ecccceeccCCcccCCcccccccccCchHhhCCC--CCCchhhhH
Confidence            457899999999999999999999999988888  99998432       2346889999999986532  356899999


Q ss_pred             HHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccC--------------------------CCCCCCHHHHHHHHHHhc
Q psy12581         79 SFAVLLWELATREVPFADLTPMEVGMKVALEGLRIT--------------------------IPPGISSHLSKLIRICMN  132 (153)
Q Consensus        79 s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~~~~~l~~~cl~  132 (153)
                      |+|+++|++++|.+||.+.........+......+.                          .....+..+.+++.+||+
T Consensus       198 slG~il~ell~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~  277 (346)
T 1ua2_A          198 AVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFL  277 (346)
T ss_dssp             HHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHC
T ss_pred             hHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHcCCCChhhhhhhccCcccccccccCCCChHHhhccCCHHHHHHHHHHhc
Confidence            999999999999999988776665554443211100                          013456889999999999


Q ss_pred             CCCCCCCCHHHHHH
Q psy12581        133 EDPGKRPTFDMVLP  146 (153)
Q Consensus       133 ~~p~~Rps~~~~l~  146 (153)
                      .||++|||+.++++
T Consensus       278 ~dP~~Rpt~~ell~  291 (346)
T 1ua2_A          278 FNPCARITATQALK  291 (346)
T ss_dssp             SSTTTSCCHHHHHT
T ss_pred             cChhhCCCHHHHhc
Confidence            99999999999985

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=99.95  E-value=1.6e-28  Score=166.01  Aligned_cols=145  Identities=23%  Similarity=0.338  Sum_probs=109.0

Q ss_pred             hhhHHhhhh--------cCCCCCCCeeeeeeeeccccchhhccccccccccc-----------CCcccCCcccCcccccc
Q psy12581          5 KIVYSFYLN--------SKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ-----------RGRCYYPAWMSPEALQK   65 (153)
Q Consensus         5 ~~~~~~~lh--------~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~-----------~~~~~~~~~~~pe~~~~   65 (153)
                      ..-++.|||        ++++.|+||++.||+++.++.+||.  |||++...           ....||+.|+|||.+.+
T Consensus       114 i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~~~~~kl~--Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  191 (301)
T 3q4u_A          114 IASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIA--DLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDE  191 (301)
T ss_dssp             HHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEECTTSCEEEC--CCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTT
T ss_pred             HHHHHHHHHHhhhhccCCCCeecCCCChHhEEEcCCCCEEEe--eCCCeeecccccccccccccccccccceeChhhhcC
Confidence            455789999        9999999999999999999988888  99987321           22378999999999876


Q ss_pred             CCCC---CCcchhhHHHHHHHHHHHHhC----------CCCCCCCCchh----hhHHHH-hhccccCCCC-----CCCHH
Q psy12581         66 KPGD---RNLEACDMWSFAVLLWELATR----------EVPFADLTPME----VGMKVA-LEGLRITIPP-----GISSH  122 (153)
Q Consensus        66 ~~~~---~~~~~~dv~s~g~~~~~~~~g----------~~p~~~~~~~~----~~~~~~-~~~~~~~~~~-----~~~~~  122 (153)
                      ....   .++.++|+||+|+++|++++|          ..||.......    ...... .....+..+.     ..+..
T Consensus       192 ~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  271 (301)
T 3q4u_A          192 TIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTS  271 (301)
T ss_dssp             CCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGSHHHHH
T ss_pred             cCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccCCCCcchhhhhHHHhccCCCCCCChhhccCccHHH
Confidence            4221   233689999999999999999          88886543222    111211 1222222222     24467


Q ss_pred             HHHHHHHHhcCCCCCCCCHHHHHHHHhhh
Q psy12581        123 LSKLIRICMNEDPGKRPTFDMVLPILDKM  151 (153)
Q Consensus       123 ~~~l~~~cl~~~p~~Rps~~~~l~~L~~~  151 (153)
                      +.+++.+||+.||++|||+.++++.|+++
T Consensus       272 l~~li~~cl~~dP~~Rps~~~i~~~L~~i  300 (301)
T 3q4u_A          272 LAKLMKECWYQNPSARLTALRIKKTLTKI  300 (301)
T ss_dssp             HHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred             HHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence            99999999999999999999999999986

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=99.95  E-value=1.1e-27  Score=171.14  Aligned_cols=136  Identities=21%  Similarity=0.255  Sum_probs=113.9

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc------CCcccCCcccCccccccCCCCCCcchhhHH
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ------RGRCYYPAWMSPEALQKKPGDRNLEACDMW   78 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~------~~~~~~~~~~~pe~~~~~~~~~~~~~~dv~   78 (153)
                      ..-++.|||++++.|+||++.||+++.++.+|+.  |||++...      ...+|++.|+|||.+.+...  .+.++|+|
T Consensus       125 i~~aL~~LH~~givHrDLkp~NIll~~~~~vkL~--DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~--~~~~~Diw  200 (476)
T 2y94_A          125 ILSGVDYCHRHMVVHRDLKPENVLLDAHMNAKIA--DFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLY--AGPEVDIW  200 (476)
T ss_dssp             HHHHHHHHHTTTEECSCCSGGGEEECTTCCEEEC--CCSSCEECCTTCCBCCCCSCSTTCCHHHHTTCCB--CSHHHHHH
T ss_pred             HHHHHHHHHHCCCCcccccHHHEEEecCCCeEEE--eccchhhccccccccccCCCcCeEChhhccCCCC--CCCcceeh
Confidence            3457899999999999999999999999998888  99998432      34578999999999886422  24789999


Q ss_pred             HHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581         79 SFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus        79 s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      |+|+++|++++|..||.+.........+...  ....|...++.+.+++.+||+.||++|||++++++
T Consensus       201 SlGvil~elltG~~Pf~~~~~~~~~~~i~~~--~~~~p~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~  266 (476)
T 2y94_A          201 SSGVILYALLCGTLPFDDDHVPTLFKKICDG--IFYTPQYLNPSVISLLKHMLQVDPMKRATIKDIRE  266 (476)
T ss_dssp             HHHHHHHHHHHSSCSSCCSSSHHHHHHHHTT--CCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             hhHHHHHHHhhCCCCCCCCCHHHHHHHHhcC--CcCCCccCCHHHHHHHHHHcCCCchhCcCHHHHHh
Confidence            9999999999999999887766665555433  33456778999999999999999999999999985

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=99.95  E-value=6.1e-28  Score=167.39  Aligned_cols=137  Identities=20%  Similarity=0.273  Sum_probs=110.0

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeecccc---chhhccccccccccc------CCcccCCcccCccccccCCCCCCcchh
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDL---TARINMADAQFSFQQ------RGRCYYPAWMSPEALQKKPGDRNLEAC   75 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~---~~kl~~~d~g~~~~~------~~~~~~~~~~~pe~~~~~~~~~~~~~~   75 (153)
                      ..-++.|||++++.|+||++.||+++.++   .+|+.  |||++...      ....||+.|++||.+.+.   .++.++
T Consensus       137 i~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~kl~--DfG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~  211 (362)
T 2bdw_A          137 ILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLA--DFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKD---PYSKPV  211 (362)
T ss_dssp             HHHHHHHHHHTTCBCCCCSGGGEEESCSSTTCCEEEC--CCTTCBCCTTCCSCCCSCSCTTTCCHHHHTTC---CCCTHH
T ss_pred             HHHHHHHHHHCCeEeccCchHHEEEecCCCCCCEEEe--ecCcceEecCCcccccCCCCccccCHHHHccC---CCCchh
Confidence            34578999999999999999999998654   36666  99998433      234789999999998764   355899


Q ss_pred             hHHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCC--CCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581         76 DMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIP--PGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus        76 dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      |+||+|+++|++++|..||.+.........+.......+.+  ...+..+.+++.+||+.||++||++.++++
T Consensus       212 DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~  284 (362)
T 2bdw_A          212 DIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALK  284 (362)
T ss_dssp             HHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTGGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             hHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCcccccCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence            99999999999999999998877666655555443333222  347899999999999999999999999874

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=99.95  E-value=4.5e-28  Score=170.02  Aligned_cols=138  Identities=20%  Similarity=0.341  Sum_probs=104.9

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeecc---ccchhhccccccccccc------CCcccCCcccCccccccCCCCCCcchh
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDE---DLTARINMADAQFSFQQ------RGRCYYPAWMSPEALQKKPGDRNLEAC   75 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~---~~~~kl~~~d~g~~~~~------~~~~~~~~~~~pe~~~~~~~~~~~~~~   75 (153)
                      ..-++.|||+++|.|+||++.||+++.   ++.+||.  |||++...      ...+||+.|++||.+.+.   .++.++
T Consensus       170 i~~aL~~LH~~~ivHrDlkp~Nill~~~~~~~~~kl~--DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~  244 (400)
T 1nxk_A          170 IGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLT--DFGFAKETTSHNSLTTPCYTPYYVAPEVLGPE---KYDKSC  244 (400)
T ss_dssp             HHHHHHHHHHTTEECCCCCGGGEEESSSSTTCCEEEC--CCTTCEECC-----------CTTCCGGGSCCC---CSSSHH
T ss_pred             HHHHHHHHHHCCccccCcCcceEEEecCCCCccEEEE--ecccccccCCCCccccCCCCCCccCHhhcCCC---CCCCcc
Confidence            345789999999999999999999997   6777777  99998433      345789999999998754   455899


Q ss_pred             hHHHHHHHHHHHHhCCCCCCCCCchh----hhHHHHhhccccCCC--CCCCHHHHHHHHHHhcCCCCCCCCHHHHHHH
Q psy12581         76 DMWSFAVLLWELATREVPFADLTPME----VGMKVALEGLRITIP--PGISSHLSKLIRICMNEDPGKRPTFDMVLPI  147 (153)
Q Consensus        76 dv~s~g~~~~~~~~g~~p~~~~~~~~----~~~~~~~~~~~~~~~--~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~  147 (153)
                      |+||+|+++|++++|..||.+.....    ....+.......+.+  ..++..+.+++.+||+.||++|||+.++++.
T Consensus       245 DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h  322 (400)
T 1nxk_A          245 DMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH  322 (400)
T ss_dssp             HHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHHHTCCCCCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred             cHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHHcCcccCCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence            99999999999999999997654322    222333333322222  4588999999999999999999999999863

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=99.95  E-value=1.8e-28  Score=167.85  Aligned_cols=143  Identities=22%  Similarity=0.339  Sum_probs=114.6

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc----------CCcccCCcccCccccccCCCCCCcch
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ----------RGRCYYPAWMSPEALQKKPGDRNLEA   74 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~----------~~~~~~~~~~~pe~~~~~~~~~~~~~   74 (153)
                      ..-++.|||++++.|+||++.||+++.++.+|+.  |||.+...          ....+++.|++||.+.+.   .++.+
T Consensus       136 i~~al~~lH~~~ivH~Dikp~NIl~~~~~~~kl~--Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~  210 (327)
T 3lxl_A          136 ICKGMEYLGSRRCVHRDLAARNILVESEAHVKIA--DFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDN---IFSRQ  210 (327)
T ss_dssp             HHHHHHHHHHTTEECSCCSGGGEEEEETTEEEEC--CGGGCEECCTTCSEEECSSCCCSCGGGSCHHHHHHC---EEEHH
T ss_pred             HHHHHHHHHhCCccCCCCChhhEEECCCCCEEEc--ccccceecccCCccceeeccCCccccccCHHHhccC---CCChH
Confidence            3457899999999999999999999999988888  99998432          223567779999998764   34589


Q ss_pred             hhHHHHHHHHHHHHhCCCCCCCCCch--------------hhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCC
Q psy12581         75 CDMWSFAVLLWELATREVPFADLTPM--------------EVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPT  140 (153)
Q Consensus        75 ~dv~s~g~~~~~~~~g~~p~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps  140 (153)
                      +|+||+|++++++++|..||......              .............+.+..++..+.+++.+||+.||++|||
T Consensus       211 ~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps  290 (327)
T 3lxl_A          211 SDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPS  290 (327)
T ss_dssp             HHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCC
T ss_pred             HhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHHHHhhcccCCCCCCcccHHHHHHHHHHcCCChhhCcC
Confidence            99999999999999999998543211              1222233445556667789999999999999999999999


Q ss_pred             HHHHHHHHhhhh
Q psy12581        141 FDMVLPILDKMK  152 (153)
Q Consensus       141 ~~~~l~~L~~~~  152 (153)
                      +.++++.|+.+.
T Consensus       291 ~~ell~~L~~~~  302 (327)
T 3lxl_A          291 FSALGPQLDMLW  302 (327)
T ss_dssp             HHHHHHHHHHC-
T ss_pred             HHHHHHHHHHHH
Confidence            999999998864

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=99.95  E-value=8e-28  Score=165.65  Aligned_cols=140  Identities=16%  Similarity=0.230  Sum_probs=108.0

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc---------CCcccCCcccCccccccCC--------
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ---------RGRCYYPAWMSPEALQKKP--------   67 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~---------~~~~~~~~~~~pe~~~~~~--------   67 (153)
                      ..-++.|||++++.|+||++.||+++ ++.+||.  |||++...         ....||+.|++||.+.+..        
T Consensus       117 i~~al~~lH~~~iiHrDikp~NIll~-~~~~kl~--DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~  193 (343)
T 3dbq_A          117 MLEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLI--DFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKS  193 (343)
T ss_dssp             HHHHHHHHHHTTCCCCCCCGGGEEEE-TTEEEEC--CCSSSCCC------------CCCCSSCCHHHHHHCC--------
T ss_pred             HHHHHHHHHhCCeecCCCCcceEEEE-CCcEEEe--ecccccccCcccccccCCCCcCCcCcCCHHHHhhcccccccccc
Confidence            34578999999999999999999997 5667777  99998432         2346899999999986411        


Q ss_pred             CCCCcchhhHHHHHHHHHHHHhCCCCCCCCCch-hhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581         68 GDRNLEACDMWSFAVLLWELATREVPFADLTPM-EVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus        68 ~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      ...++.++|+||+|+++|++++|..||...... ...............+...+..+.+++.+||+.||++|||+.++++
T Consensus       194 ~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~  273 (343)
T 3dbq_A          194 KSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLA  273 (343)
T ss_dssp             ---CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             ccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHHHHHHHHhcCCcccCCcccCCHHHHHHHHHHcCCChhHCCCHHHHHh
Confidence            124568999999999999999999999775433 2333333344455667778899999999999999999999999975


Q ss_pred             H
Q psy12581        147 I  147 (153)
Q Consensus       147 ~  147 (153)
                      .
T Consensus       274 h  274 (343)
T 3dbq_A          274 H  274 (343)
T ss_dssp             S
T ss_pred             C
Confidence            3

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=99.95  E-value=1e-27  Score=165.35  Aligned_cols=130  Identities=19%  Similarity=0.297  Sum_probs=105.1

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccc-------cCCcccCCcccCccccccCCCCCCcchhhH
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQ-------QRGRCYYPAWMSPEALQKKPGDRNLEACDM   77 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~-------~~~~~~~~~~~~pe~~~~~~~~~~~~~~dv   77 (153)
                      ..-++.|||++++.|+||++.||+++.+|.+||.  |||++..       ....+||+.|+|||.+.+.   .++.++|+
T Consensus       119 i~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~--DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~Di  193 (345)
T 3a8x_A          119 ISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLT--DYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGE---DYGFSVDW  193 (345)
T ss_dssp             HHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEEC--CGGGCBCSCCTTCCBCCCCSCGGGCCHHHHTTC---CBCTHHHH
T ss_pred             HHHHHHHHHHCCceecCCCHHHEEECCCCCEEEE--eccccccccCCCCcccccCCCccccCccccCCC---CCChHHhH
Confidence            3557899999999999999999999999998888  9999853       2344789999999999864   34589999


Q ss_pred             HHHHHHHHHHHhCCCCCCCCCc---------hhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCH
Q psy12581         78 WSFAVLLWELATREVPFADLTP---------MEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTF  141 (153)
Q Consensus        78 ~s~g~~~~~~~~g~~p~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~  141 (153)
                      ||+|+++|++++|..||.....         ......+...  ....|...+..+.+++.+||+.||++||++
T Consensus       194 wslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~--~~~~p~~~s~~~~~li~~lL~~dP~~R~~~  264 (345)
T 3a8x_A          194 WALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEK--QIRIPRSLSVKAASVLKSFLNKDPKERLGC  264 (345)
T ss_dssp             HHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHC--CCCCCTTSCHHHHHHHHHHTCSSTTTSTTC
T ss_pred             HHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcC--CCCCCCCCCHHHHHHHHHHhcCCHhHCCCC
Confidence            9999999999999999965211         1122222222  445677899999999999999999999985

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=99.95  E-value=6.7e-28  Score=164.45  Aligned_cols=138  Identities=12%  Similarity=0.060  Sum_probs=109.1

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc-------CCcccCCcccCccccccCCCCCCcchhhH
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ-------RGRCYYPAWMSPEALQKKPGDRNLEACDM   77 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~-------~~~~~~~~~~~pe~~~~~~~~~~~~~~dv   77 (153)
                      ..-++.|||++++.|+||++.||+++.++.+||.  |||.+...       ....+++.|++||.+.+.  ..++.++|+
T Consensus       117 i~~aL~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~--Dfg~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~--~~~~~~~Di  192 (317)
T 2pmi_A          117 LLQGLAFCHENKILHRDLKPQNLLINKRGQLKLG--DFGLARAFGIPVNTFSSEVVTLWYRAPDVLMGS--RTYSTSIDI  192 (317)
T ss_dssp             HHHHHHHHHHTTEECCCCCGGGEEECTTCCEEEC--CCSSCEETTSCCCCCCCCCSCCTTCCHHHHTTC--CCCCTHHHH
T ss_pred             HHHHHHHHHHCCeeeCCCChHHeEEcCCCCEEEC--cCccceecCCCcccCCCCcccccccCchHhhCC--CCCCcHHHH
Confidence            3457899999999999999999999999998888  99998432       234678999999998753  235589999


Q ss_pred             HHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhcc--------------------------------ccCCCCCCCHHHHH
Q psy12581         78 WSFAVLLWELATREVPFADLTPMEVGMKVALEGL--------------------------------RITIPPGISSHLSK  125 (153)
Q Consensus        78 ~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~--------------------------------~~~~~~~~~~~~~~  125 (153)
                      ||+|+++|++++|..||.+.........+.....                                ....+...+..+.+
T Consensus       193 wslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  272 (317)
T 2pmi_A          193 WSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMD  272 (317)
T ss_dssp             HHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCTTTCGGGGGCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHH
T ss_pred             HHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhHhhhhhhhhhcccccccccchhHHHhhcccccccCCHHHHH
Confidence            9999999999999999988776555444322100                                00112346789999


Q ss_pred             HHHHHhcCCCCCCCCHHHHHH
Q psy12581        126 LIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus       126 l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      ++.+||+.||++|||++++++
T Consensus       273 li~~~L~~dP~~Rpt~~e~l~  293 (317)
T 2pmi_A          273 FLHGLLQLNPDMRLSAKQALH  293 (317)
T ss_dssp             HHHHHSCSSGGGSCCHHHHTT
T ss_pred             HHHHHCCCCcccCCCHHHHhC
Confidence            999999999999999999875

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=99.95  E-value=9.3e-28  Score=163.11  Aligned_cols=143  Identities=21%  Similarity=0.238  Sum_probs=105.6

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc-------CCcccCCcccCccccccCCCCCCcchhhH
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ-------RGRCYYPAWMSPEALQKKPGDRNLEACDM   77 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~-------~~~~~~~~~~~pe~~~~~~~~~~~~~~dv   77 (153)
                      ..-++.|||++++.|+||.+.||+++.++.+++.  |||++...       ....+++.|++||.+.+.   .++.++|+
T Consensus       145 i~~~l~~LH~~~i~H~dl~p~NIl~~~~~~~kl~--Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Dv  219 (310)
T 2wqm_A          145 LCSALEHMHSRRVMHRDIKPANVFITATGVVKLG--DLGLGRFFSSKTTAAHSLVGTPYYMSPERIHEN---GYNFKSDI  219 (310)
T ss_dssp             HHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEEC--CC------------------CCSSCCHHHHTTC---CCCHHHHH
T ss_pred             HHHHHHHHhhCCeeCCCCcHHHEEEcCCCCEEEE--eccceeeecCCCccccccCCCeeEeChHHhCCC---CCCchhhH
Confidence            3457899999999999999999999999988888  99987432       223678899999998764   45589999


Q ss_pred             HHHHHHHHHHHhCCCCCCCCCch-hhhHHHHhhccccC-CCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHhhhh
Q psy12581         78 WSFAVLLWELATREVPFADLTPM-EVGMKVALEGLRIT-IPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKMK  152 (153)
Q Consensus        78 ~s~g~~~~~~~~g~~p~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~~~~  152 (153)
                      ||+|++++++++|..||.+.... .............. .+...+..+.+++.+||..||++|||+.++++.|++++
T Consensus       220 ~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~  296 (310)
T 2wqm_A          220 WSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMH  296 (310)
T ss_dssp             HHHHHHHHHHHHSSCTTC---CCHHHHHHHHHTTCSCCCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhCCCCCcccchhHHHHHHHhhcccCCCCcccccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHH
Confidence            99999999999999999764322 11222222222222 23568899999999999999999999999999999875

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=99.95  E-value=2.2e-28  Score=174.45  Aligned_cols=136  Identities=18%  Similarity=0.151  Sum_probs=104.7

Q ss_pred             hhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc------CCcccCCcccCccccccCCCCCCcchhhHHH
Q psy12581          6 IVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ------RGRCYYPAWMSPEALQKKPGDRNLEACDMWS   79 (153)
Q Consensus         6 ~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~------~~~~~~~~~~~pe~~~~~~~~~~~~~~dv~s   79 (153)
                      .-++.|||+++|.|+||++.||+++.++.+||.  |||++...      ....+|+.|+|||.+.+.   .++.++|+||
T Consensus       174 l~aL~~lH~~~iiHrDlkp~NIll~~~~~~kl~--DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwS  248 (464)
T 3ttj_A          174 LCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKIL--DFGLARTAGTSFMMTPYVVTRYYRAPEVILGM---GYKENVDIWS  248 (464)
T ss_dssp             HHHHHHHHHTTCCCCCCCGGGEEECTTSCEEEC--CCCCC-----CCCC----CCCTTCCHHHHTTC---CCCTTHHHHH
T ss_pred             HHHHHHHHHCCcccCCCChHhEEEeCCCCEEEE--EEEeeeecCCCcccCCCcccccccCHHHHcCC---CCCHHHHHHH
Confidence            457899999999999999999999999998888  99998432      335789999999999875   3558999999


Q ss_pred             HHHHHHHHHhCCCCCCCCCchhhhHHHHhhcccc--------------------C---------CCCC-----------C
Q psy12581         80 FAVLLWELATREVPFADLTPMEVGMKVALEGLRI--------------------T---------IPPG-----------I  119 (153)
Q Consensus        80 ~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~--------------------~---------~~~~-----------~  119 (153)
                      +|++++++++|+.||.+.........+......+                    .         .+..           .
T Consensus       249 lG~il~ell~g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  328 (464)
T 3ttj_A          249 VGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLK  328 (464)
T ss_dssp             HHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTSCHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHH
T ss_pred             HHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHcchhhhhHhhcccccCCCChHHhCccccccccccccccc
Confidence            9999999999999998877665554443211000                    0         0000           0


Q ss_pred             CHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581        120 SSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus       120 ~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      ++.+.+++.+||+.||++|||++++++
T Consensus       329 s~~~~dLl~~mL~~dP~~R~ta~e~L~  355 (464)
T 3ttj_A          329 ASQARDLLSKMLVIDPAKRISVDDALQ  355 (464)
T ss_dssp             HHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             CHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence            456899999999999999999999985

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=99.95  E-value=6.5e-28  Score=178.03  Aligned_cols=142  Identities=24%  Similarity=0.407  Sum_probs=117.7

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccccC--------CcccCCcccCccccccCCCCCCcchhh
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQR--------GRCYYPAWMSPEALQKKPGDRNLEACD   76 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~--------~~~~~~~~~~pe~~~~~~~~~~~~~~d   76 (153)
                      ..-++.|||++++.|+||++.||+++.++.+|+.  |||++....        ...+++.|+|||.+.+.   .++.++|
T Consensus       500 i~~aL~~LH~~givHrDikp~NILl~~~~~vkL~--DFG~a~~~~~~~~~~~~~~~~t~~y~aPE~~~~~---~~~~~~D  574 (656)
T 2j0j_A          500 LSTALAYLESKRFVHRDIAARNVLVSSNDCVKLG--DFGLSRYMEDSTYYKASKGKLPIKWMAPESINFR---RFTSASD  574 (656)
T ss_dssp             HHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEEC--CCCCCCSCCC----------CCGGGCCHHHHHHC---CCCHHHH
T ss_pred             HHHHHHHHHhCCccccccchHhEEEeCCCCEEEE--ecCCCeecCCCcceeccCCCCCcceeCHHHhcCC---CCCchhh
Confidence            4557899999999999999999999999998888  999984332        23456789999998764   4558999


Q ss_pred             HHHHHHHHHHHHh-CCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHhhhh
Q psy12581         77 MWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKMK  152 (153)
Q Consensus        77 v~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~~~~  152 (153)
                      +||+|+++|++++ |..||.+.........+. .+...+.+..++..+.+++.+||..||++|||+.++++.|+++.
T Consensus       575 iwSlG~il~ellt~g~~Pf~~~~~~~~~~~i~-~~~~~~~~~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~il  650 (656)
T 2j0j_A          575 VWMFGVCMWEILMHGVKPFQGVKNNDVIGRIE-NGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTIL  650 (656)
T ss_dssp             HHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHH-HTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHH-cCCCCCCCccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence            9999999999997 999998877666554443 44455667889999999999999999999999999999998873

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=99.95  E-value=1.1e-28  Score=171.98  Aligned_cols=134  Identities=8%  Similarity=0.030  Sum_probs=104.3

Q ss_pred             chhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc----CCcccCCcccCccccccCC--------CCCC
Q psy12581          4 KKIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ----RGRCYYPAWMSPEALQKKP--------GDRN   71 (153)
Q Consensus         4 ~~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~----~~~~~~~~~~~pe~~~~~~--------~~~~   71 (153)
                      ...-++.|||+++|.|+||++.||+++.++.+||.  |||++...    ....| +.|+|||.+.+..        ...+
T Consensus       214 qi~~aL~~LH~~~ivHrDikp~NIll~~~~~~kL~--DFG~a~~~~~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~  290 (377)
T 3byv_A          214 QVIRLLASLHHYGLVHTYLRPVDIVLDQRGGVFLT--GFEHLVRDGARVVSSVS-RGFEPPELEARRATISYHRDRRTLM  290 (377)
T ss_dssp             HHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEEC--CGGGCEETTCEEECCCC-TTCCCHHHHHHHTSTHHHHCCEEEC
T ss_pred             HHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEE--echhheecCCcccCCCC-cCccChhhhcccccccccccccccC
Confidence            34567899999999999999999999999988888  99998543    23466 9999999987640        0134


Q ss_pred             cchhhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581         72 LEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus        72 ~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      +.++|+||+|+++|++++|+.||.+.........+.      ..+..++..+.+++.+||+.||++|||+.++++
T Consensus       291 ~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~~~------~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~  359 (377)
T 3byv_A          291 TFSFDAWALGLVIYWIWCADLPITKDAALGGSEWIF------RSCKNIPQPVRALLEGFLRYPKEDRLLPLQAME  359 (377)
T ss_dssp             CHHHHHHHHHHHHHHHHHSSCCC------CCSGGGG------SSCCCCCHHHHHHHHHHTCSSGGGCCCHHHHHT
T ss_pred             ChhhhHHHHHHHHHHHHHCCCCCcccccccchhhhh------hhccCCCHHHHHHHHHHcCCCchhCCCHHHHhh
Confidence            589999999999999999999997655433322221      223567899999999999999999999999985

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=99.95  E-value=5.5e-28  Score=162.67  Aligned_cols=140  Identities=16%  Similarity=0.170  Sum_probs=104.1

Q ss_pred             hhhHHhhhhcC-CCCCCCeeeeeeeeccccchhhccccccccccc------CCcccCCcccCccccccC-CCCCCcchhh
Q psy12581          5 KIVYSFYLNSK-KSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ------RGRCYYPAWMSPEALQKK-PGDRNLEACD   76 (153)
Q Consensus         5 ~~~~~~~lh~~-~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~------~~~~~~~~~~~pe~~~~~-~~~~~~~~~d   76 (153)
                      ..-++.|||++ ++.|+||++.||+++.++.+|+.  |||.+...      ....+++.|++||.+... ....++.++|
T Consensus       118 i~~~l~~lH~~~~i~H~dlkp~Nil~~~~~~~kl~--Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~D  195 (290)
T 3fme_A          118 IVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMC--DFGISGYLVDDVAKDIDAGCKPYMAPERINPELNQKGYSVKSD  195 (290)
T ss_dssp             HHHHHHHHHHHSCCCCCCCSGGGCEECTTCCEEBC--CC---------------CCCCCCSCHHHHSCCTTC--CCHHHH
T ss_pred             HHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEe--ecCCcccccccccccccCCCccccChhhcChhhcCcCCCcHHH
Confidence            34578999998 99999999999999999988888  99988432      223688999999997421 1234568999


Q ss_pred             HHHHHHHHHHHHhCCCCCCCCCch-hhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581         77 MWSFAVLLWELATREVPFADLTPM-EVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus        77 v~s~g~~~~~~~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      +||+|++++++++|..||...... ...............+...+..+.+++.+||+.||++|||+.++++
T Consensus       196 i~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~  266 (290)
T 3fme_A          196 IWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQ  266 (290)
T ss_dssp             HHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             HHHHHHHHHHHHHCCCCccccCchHHHHHHHhccCCCCcccccCCHHHHHHHHHHhhcChhhCcCHHHHHh
Confidence            999999999999999999764433 3333333333333334568999999999999999999999999976

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=99.95  E-value=8.7e-28  Score=164.51  Aligned_cols=137  Identities=20%  Similarity=0.207  Sum_probs=109.9

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeecccc----chhhccccccccccc------CCcccCCcccCccccccCCCCCCcch
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDL----TARINMADAQFSFQQ------RGRCYYPAWMSPEALQKKPGDRNLEA   74 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~----~~kl~~~d~g~~~~~------~~~~~~~~~~~pe~~~~~~~~~~~~~   74 (153)
                      ..-++.|||++++.|+||.+.||+++.++    .+|+.  |||++...      ....|++.|++||.+.+.   .++.+
T Consensus       123 i~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~kl~--Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~  197 (326)
T 2y0a_A          123 ILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKII--DFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYE---PLGLE  197 (326)
T ss_dssp             HHHHHHHHHHTTEECCCCCGGGEEESCSSSSSCCEEEC--CCTTCEECCTTSCCCCCCSCTTTCCHHHHTTC---CCCTH
T ss_pred             HHHHHHHHHHCCeEcCCCCHHHEEEecCCCCCCCEEEE--ECCCCeECCCCCccccccCCcCcCCceeecCC---CCCcH
Confidence            34578999999999999999999999887    56666  99998432      234789999999998754   35589


Q ss_pred             hhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccC--CCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581         75 CDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRIT--IPPGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus        75 ~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      +|+||+|+++|++++|..||.+.........+.......+  .+...+..+.+++.+||+.||++|||+.++++
T Consensus       198 ~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  271 (326)
T 2y0a_A          198 ADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ  271 (326)
T ss_dssp             HHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHTCCCCCHHHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHhcCCCcCccccccCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence            9999999999999999999988766655544443322221  12467889999999999999999999999986

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=99.95  E-value=7.2e-28  Score=165.04  Aligned_cols=143  Identities=13%  Similarity=0.093  Sum_probs=110.1

Q ss_pred             chhhHHhhhhcCCCCCCCeeeeeeeeccccc-----hhhccccccccccc--------------CCcccCCcccCccccc
Q psy12581          4 KKIVYSFYLNSKKSKTSNAFLFCCQIDEDLT-----ARINMADAQFSFQQ--------------RGRCYYPAWMSPEALQ   64 (153)
Q Consensus         4 ~~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~-----~kl~~~d~g~~~~~--------------~~~~~~~~~~~pe~~~   64 (153)
                      ...-++.|||++++.|+||++.||+++.++.     +||.  |||++...              ....||+.|++||.+.
T Consensus       113 qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~~~~kl~--DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~  190 (330)
T 2izr_A          113 QLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHII--DFALAKEYIDPETKKHIPYREHKSLTGTARYMSINTHL  190 (330)
T ss_dssp             HHHHHHHHHHHTTEECCCCCGGGEEECCGGGTCTTSEEEC--CCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHT
T ss_pred             HHHHHHHHHHhCCeeccCCCHHHeeeccCCCCCCceEEEE--EcccceeeecCCCCccccccccCCcCCCccccChHHHc
Confidence            3456789999999999999999999999887     6777  99998432              2447899999999988


Q ss_pred             cCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCchhh---hHHHHhhccccC---CCCCCCHHHHHHHHHHhcCCCCCC
Q psy12581         65 KKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEV---GMKVALEGLRIT---IPPGISSHLSKLIRICMNEDPGKR  138 (153)
Q Consensus        65 ~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~---~~~~~~~~~~~~---~~~~~~~~~~~l~~~cl~~~p~~R  138 (153)
                      +.   .++.++|+||+|+++|++++|..||.+......   ...+.......+   .....+ .+.+++..||..+|.+|
T Consensus       191 ~~---~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~p-~~~~li~~~l~~~p~~R  266 (330)
T 2izr_A          191 GK---EQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRATPIEVLCENFP-EMATYLRYVRRLDFFEK  266 (330)
T ss_dssp             TC---CCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHHHHHHHSCHHHHTTTCH-HHHHHHHHHHHCCTTCC
T ss_pred             CC---CCCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHHHhhhccCCHHHHhccCh-HHHHHHHHHHhCCCCCC
Confidence            64   355899999999999999999999987543332   222211111111   112233 99999999999999999


Q ss_pred             CCHHHHHHHHhhhh
Q psy12581        139 PTFDMVLPILDKMK  152 (153)
Q Consensus       139 ps~~~~l~~L~~~~  152 (153)
                      |++.++.+.|+++.
T Consensus       267 P~~~~l~~~l~~~~  280 (330)
T 2izr_A          267 PDYDYLRKLFTDLF  280 (330)
T ss_dssp             CCHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHH
Confidence            99999999998763

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=99.95  E-value=1e-28  Score=168.25  Aligned_cols=146  Identities=18%  Similarity=0.178  Sum_probs=112.4

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccccC----------------CcccCCcccCccccccCCC
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQR----------------GRCYYPAWMSPEALQKKPG   68 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~----------------~~~~~~~~~~pe~~~~~~~   68 (153)
                      ..-++.|||++++.|+||.+.||+++.++.+++.  |||.+....                ...+++.|++||.+.....
T Consensus       143 i~~~L~~LH~~~ivH~dlkp~NIl~~~~~~~kl~--dfg~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~  220 (317)
T 2buj_A          143 ICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLM--DLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSH  220 (317)
T ss_dssp             HHHHHHHHHHTTEECCCCCGGGEEECTTSCEEEC--CCSSCEESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSE
T ss_pred             HHHHHHHHHhCCcccCCCCHHHEEEcCCCCEEEE--ecCcchhcccccccccccccccccccccCCcccCCHhHhccCCC
Confidence            3457899999999999999999999999988888  999763321                1245889999999875432


Q ss_pred             CCCcchhhHHHHHHHHHHHHhCCCCCCCCCch-hhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHH
Q psy12581         69 DRNLEACDMWSFAVLLWELATREVPFADLTPM-EVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPI  147 (153)
Q Consensus        69 ~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~  147 (153)
                      ..++.++|+||+|++++++++|..||...... .............+.+...+..+.+++.+||+.||++|||+.++++.
T Consensus       221 ~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~  300 (317)
T 2buj_A          221 CVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQNQLSIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQ  300 (317)
T ss_dssp             EEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHHHHHHCC--CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             cCCCchhhHHHHHHHHHHHHhCCCChhhhhcccchhhHHhhccCCCCccccCCHHHHHHHHHHhhcChhhCCCHHHHHHH
Confidence            23457999999999999999999998542111 11112222333444456789999999999999999999999999999


Q ss_pred             Hhhhh
Q psy12581        148 LDKMK  152 (153)
Q Consensus       148 L~~~~  152 (153)
                      |+.+.
T Consensus       301 L~~~~  305 (317)
T 2buj_A          301 LEALQ  305 (317)
T ss_dssp             HHHTC
T ss_pred             hhhcC
Confidence            99875

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=99.95  E-value=4.9e-28  Score=164.74  Aligned_cols=133  Identities=18%  Similarity=0.144  Sum_probs=105.3

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc------CCcccCCcccCccccccCCCCCCcchhhHH
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ------RGRCYYPAWMSPEALQKKPGDRNLEACDMW   78 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~------~~~~~~~~~~~pe~~~~~~~~~~~~~~dv~   78 (153)
                      ..-++.|||++++.|+||++.||+++.++.+||.  |||++...      ....||+.|+|||.+.+    .++.++|+|
T Consensus       166 i~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kl~--DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~Diw  239 (311)
T 3p1a_A          166 TLLALAHLHSQGLVHLDVKPANIFLGPRGRCKLG--DFGLLVELGTAGAGEVQEGDPRYMAPELLQG----SYGTAADVF  239 (311)
T ss_dssp             HHHHHHHHHHTTEECCCCSGGGEEECGGGCEEEC--CCTTCEECC------CCCCCGGGCCGGGGGT----CCSTHHHHH
T ss_pred             HHHHHHHHHHCCEecCCCCHHHEEECCCCCEEEc--cceeeeecccCCCCcccCCCccccCHhHhcC----CCCchhhHH
Confidence            4567899999999999999999999999999888  99997433      23468999999999875    456899999


Q ss_pred             HHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581         79 SFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus        79 s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      |+|++++++++|..++.+..   ....+.........+...+..+.+++.+||+.||++|||++++++
T Consensus       240 slG~il~el~~g~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~  304 (311)
T 3p1a_A          240 SLGLTILEVACNMELPHGGE---GWQQLRQGYLPPEFTAGLSSELRSVLVMMLEPDPKLRATAEALLA  304 (311)
T ss_dssp             HHHHHHHHHHHTCCCCSSHH---HHHHHTTTCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             HHHHHHHHHHhCCCCCCCcc---HHHHHhccCCCcccccCCCHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence            99999999999976654422   122222222223345568899999999999999999999999885

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=99.95  E-value=2.6e-28  Score=165.55  Aligned_cols=142  Identities=20%  Similarity=0.236  Sum_probs=109.5

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc---------CCcccCCcccCccccccCCCCCCcchh
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ---------RGRCYYPAWMSPEALQKKPGDRNLEAC   75 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~---------~~~~~~~~~~~pe~~~~~~~~~~~~~~   75 (153)
                      ..-++.|||++++.|+||.+.||+++.++.+++.  |||.+...         ....+++.|++||.+.+    .++.++
T Consensus       142 i~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~--Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~----~~~~~~  215 (307)
T 2nru_A          142 AANGINFLHENHHIHRDIKSANILLDEAFTAKIS--DFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG----EITPKS  215 (307)
T ss_dssp             HHHHHHHHHHTTEECSCCCGGGEEECTTCCEEEC--CCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT----EECTHH
T ss_pred             HHHHHHHHhcCCeecCCCCHHHEEEcCCCcEEEe--ecccccccccccccccccccCCCcCcCChHHhcC----CCCccc
Confidence            3456899999999999999999999999988888  99987432         22367899999998865    345789


Q ss_pred             hHHHHHHHHHHHHhCCCCCCCCCchhhhHHHHh---h----------ccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHH
Q psy12581         76 DMWSFAVLLWELATREVPFADLTPMEVGMKVAL---E----------GLRITIPPGISSHLSKLIRICMNEDPGKRPTFD  142 (153)
Q Consensus        76 dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~---~----------~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~  142 (153)
                      |+||+|++++++++|..||...........+..   .          ......+...+..+.+++.+||+.+|++|||+.
T Consensus       216 Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~  295 (307)
T 2nru_A          216 DIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIK  295 (307)
T ss_dssp             HHHHHHHHHHHHHHCCCSBCTTBSSSBTTHHHHHHHTTSCCHHHHSCSSCSCCCHHHHHHHHHHHHHHTCSSTTTSCCHH
T ss_pred             hhHHHHHHHHHHHHCCCCcccCcchHHHHHHHHHhhhhhhhhhhhccccccccchHHHHHHHHHHHHHcCCCcccCcCHH
Confidence            999999999999999999976544332222111   0          001111222446788999999999999999999


Q ss_pred             HHHHHHhhhh
Q psy12581        143 MVLPILDKMK  152 (153)
Q Consensus       143 ~~l~~L~~~~  152 (153)
                      ++++.|+++.
T Consensus       296 ~l~~~L~~l~  305 (307)
T 2nru_A          296 KVQQLLQEMT  305 (307)
T ss_dssp             HHHHHHHHHC
T ss_pred             HHHHHHHHHh
Confidence            9999999875

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=99.95  E-value=5.3e-28  Score=162.76  Aligned_cols=141  Identities=21%  Similarity=0.382  Sum_probs=108.9

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccc--------hhhcccccccccccCC---cccCCcccCccccccCCCCCCcc
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLT--------ARINMADAQFSFQQRG---RCYYPAWMSPEALQKKPGDRNLE   73 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~--------~kl~~~d~g~~~~~~~---~~~~~~~~~pe~~~~~~~~~~~~   73 (153)
                      ..-++.|||++++.|+||++.||+++.++.        +|+.  |||.+.....   ..+++.|++||.+.+.  ..++.
T Consensus       122 i~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~--Dfg~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~  197 (289)
T 4fvq_A          122 LAAAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLS--DPGISITVLPKDILQERIPWVPPECIENP--KNLNL  197 (289)
T ss_dssp             HHHHHHHHHHTTCCCCCCCGGGEEEEECCBGGGTBCCEEEEC--CCCSCTTTSCHHHHHHTTTTSCHHHHHCG--GGCCH
T ss_pred             HHHHHHHHhhCCeECCCcCcceEEEecCCcccccccceeeec--cCcccccccCccccCCcCcccCHHHhCCC--CCCCc
Confidence            345789999999999999999999998887        5555  9998844322   3578899999998752  13558


Q ss_pred             hhhHHHHHHHHHHHHhC-CCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHhhhh
Q psy12581         74 ACDMWSFAVLLWELATR-EVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKMK  152 (153)
Q Consensus        74 ~~dv~s~g~~~~~~~~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~~~~  152 (153)
                      ++|+||+|+++|++++| .+|+........ ......  ....+...+..+.+++.+||+.||++|||+.++++.|+++.
T Consensus       198 ~~DiwslG~il~el~~g~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~  274 (289)
T 4fvq_A          198 ATDKWSFGTTLWEICSGGDKPLSALDSQRK-LQFYED--RHQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLF  274 (289)
T ss_dssp             HHHHHHHHHHHHHHHTTTCCTTTTSCHHHH-HHHHHT--TCCCCCCSSCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC
T ss_pred             hhHHHHHHHHHHHHHcCCCCCccccchHHH-HHHhhc--cCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhc
Confidence            99999999999999995 455544443332 222222  33445566788999999999999999999999999999874

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=99.95  E-value=2.1e-27  Score=165.02  Aligned_cols=138  Identities=17%  Similarity=0.139  Sum_probs=110.1

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc----CCcccCCcccCccccccCCCCCCcchhhHHHH
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ----RGRCYYPAWMSPEALQKKPGDRNLEACDMWSF   80 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~----~~~~~~~~~~~pe~~~~~~~~~~~~~~dv~s~   80 (153)
                      ..-++.|||++++.|+||++.||+++.++.+|+.  |||++...    ....+|+.|+|||.+.+.  ..++.++|+||+
T Consensus       137 i~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~--Dfg~a~~~~~~~~~~~~t~~y~aPE~~~~~--~~~~~~~Diwsl  212 (367)
T 1cm8_A          137 MLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKIL--DFGLARQADSEMTGYVVTRWYRAPEVILNW--MRYTQTVDIWSV  212 (367)
T ss_dssp             HHHHHHHHHHTTEECCCCCGGGEEECTTCCEEEC--CCTTCEECCSSCCSSCSCGGGCCTHHHHTT--TCCCTTHHHHHH
T ss_pred             HHHHHHHHHHCCccccCcCHHHEEEcCCCCEEEE--eeecccccccccCcCcCCCCcCCHHHHhCC--CCCChhhhHHHH
Confidence            3457899999999999999999999999988888  99998543    334788999999998752  235588999999


Q ss_pred             HHHHHHHHhCCCCCCCCCchhhhHHHHhhccc-----------------------------cCCCCCCCHHHHHHHHHHh
Q psy12581         81 AVLLWELATREVPFADLTPMEVGMKVALEGLR-----------------------------ITIPPGISSHLSKLIRICM  131 (153)
Q Consensus        81 g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~-----------------------------~~~~~~~~~~~~~l~~~cl  131 (153)
                      |++++++++|+.||.+.........+......                             .......++.+.+++.+||
T Consensus       213 G~il~ell~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL  292 (367)
T 1cm8_A          213 GCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKML  292 (367)
T ss_dssp             HHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHS
T ss_pred             HHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHc
Confidence            99999999999999887665554433221000                             0122456889999999999


Q ss_pred             cCCCCCCCCHHHHHH
Q psy12581        132 NEDPGKRPTFDMVLP  146 (153)
Q Consensus       132 ~~~p~~Rps~~~~l~  146 (153)
                      +.||++|||++++++
T Consensus       293 ~~dP~~R~t~~e~l~  307 (367)
T 1cm8_A          293 VLDAEQRVTAGEALA  307 (367)
T ss_dssp             CSSTTTSCCHHHHHH
T ss_pred             cCChhHCCCHHHHhc
Confidence            999999999999986

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=99.95  E-value=1.2e-27  Score=166.15  Aligned_cols=140  Identities=20%  Similarity=0.264  Sum_probs=111.5

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc------CCcccCCcccCccccccCC---CCCCcchh
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ------RGRCYYPAWMSPEALQKKP---GDRNLEAC   75 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~------~~~~~~~~~~~pe~~~~~~---~~~~~~~~   75 (153)
                      ..-++.|||++++.|+||.+.||+++.++.+++.  |||++...      ....|++.|++||.+.+..   ...++.++
T Consensus       209 i~~~L~~LH~~gi~H~Dlkp~NIl~~~~~~ikl~--DfG~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~  286 (365)
T 2y7j_A          209 LLEAVSFLHANNIVHRDLKPENILLDDNMQIRLS--DFGFSCHLEPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEV  286 (365)
T ss_dssp             HHHHHHHHHHTTEECSCCSGGGEEECTTCCEEEC--CCTTCEECCTTCCBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTH
T ss_pred             HHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEE--ecCcccccCCCcccccCCCCCCccChhhccccccccCcCCCchh
Confidence            3457899999999999999999999999988888  99987432      3347899999999986431   12356789


Q ss_pred             hHHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCC--CCCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581         76 DMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITI--PPGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus        76 dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      |+||+|+++|++++|..||.+.........+.........  ....+..+.+++.+||+.||++|||+.++++
T Consensus       287 Di~slG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~  359 (365)
T 2y7j_A          287 DLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQYQFSSPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQ  359 (365)
T ss_dssp             HHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCHHHHSSSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             hHHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence            9999999999999999999887665555444433332221  2457889999999999999999999999986

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=99.95  E-value=8.8e-28  Score=169.88  Aligned_cols=137  Identities=14%  Similarity=0.018  Sum_probs=106.6

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccc--hhhccccccccccc----CCcccCCcccCccccccCCCCCCcchhhHH
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLT--ARINMADAQFSFQQ----RGRCYYPAWMSPEALQKKPGDRNLEACDMW   78 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~--~kl~~~d~g~~~~~----~~~~~~~~~~~pe~~~~~~~~~~~~~~dv~   78 (153)
                      ..-++.|||+++|.|+||++.||+++.++.  +||.  |||++...    ....+|+.|+|||.+.+..   ++.++|+|
T Consensus       209 i~~aL~~LH~~~ivHrDlKp~NILl~~~~~~~vkL~--DFG~a~~~~~~~~~~~gt~~y~aPE~~~~~~---~~~~~Diw  283 (429)
T 3kvw_A          209 ILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVI--DFGSSCYEHQRVYTYIQSRFYRAPEVILGAR---YGMPIDMW  283 (429)
T ss_dssp             HHHHHHHHHHHTEECSCCSGGGEEESSTTSCCEEEC--CCTTCEETTCCCCSSCSCGGGCCHHHHHTBC---CCTHHHHH
T ss_pred             HHHHHHHHHHCCeecCCCCHHHeEEccCCCcceEEe--ecccceecCCcccccCCCCCccChHHHhCCC---CCchHHHH
Confidence            345789999999999999999999999987  5555  99998433    3347889999999998653   45899999


Q ss_pred             HHHHHHHHHHhCCCCCCCCCchhhhHHHHhhcccc---------------------------------------------
Q psy12581         79 SFAVLLWELATREVPFADLTPMEVGMKVALEGLRI---------------------------------------------  113 (153)
Q Consensus        79 s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~---------------------------------------------  113 (153)
                      |+|+++|++++|..||.+.........+......+                                             
T Consensus       284 SlG~il~elltG~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  363 (429)
T 3kvw_A          284 SLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKLLDASKRAKNFVSSKGYPRYCTVTTLSDGSVVLNGGRSRRGK  363 (429)
T ss_dssp             HHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTBTTHHHHBCTTSCBTTSCEECCCC--CEECCEECTTCC
T ss_pred             hHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHhhhhhhhccCCCCCcccccccccccccccccccccchhh
Confidence            99999999999999998876555443332110000                                             


Q ss_pred             ------------CCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581        114 ------------TIPPGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus       114 ------------~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                                  ..+...++.+.+++.+||+.||++|||++++++
T Consensus       364 ~~~~~~~~~~~~~l~~~~~~~~~dli~~~L~~dP~~Rpta~e~L~  408 (429)
T 3kvw_A          364 LRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRMTPGQALR  408 (429)
T ss_dssp             EECSTTCSCHHHHTTTCCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             ccCCccchhhHhhccccchHHHHHHHHHHCCCChhhCCCHHHHhC
Confidence                        011223678999999999999999999999985

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=99.95  E-value=1.4e-28  Score=167.95  Aligned_cols=142  Identities=20%  Similarity=0.229  Sum_probs=108.0

Q ss_pred             hhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc---------CCcccCCcccCccccccCCCCCCcchhh
Q psy12581          6 IVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ---------RGRCYYPAWMSPEALQKKPGDRNLEACD   76 (153)
Q Consensus         6 ~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~---------~~~~~~~~~~~pe~~~~~~~~~~~~~~d   76 (153)
                      .-++.|||++++.|+||.+.||+++.++.+|+.  |||++...         ....|++.|++||.+.+.   .++.++|
T Consensus       149 ~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~--Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~D  223 (321)
T 2qkw_B          149 ARGLHYLHTRAIIHRDVKSINILLDENFVPKIT--DFGISKKGTELDQTHLSTVVKGTLGYIDPEYFIKG---RLTEKSD  223 (321)
T ss_dssp             HHHHHHHHHTTEECSCCCSTTEEECTTCCEEEC--CCTTCEECSSSSCCCCBCCCEEETTTCCHHHHHHC---BCCTHHH
T ss_pred             HHHHHHhcCCCeecCCCCHHHEEECCCCCEEEe--ecccccccccccccccccccCCCccccCHHHhcCC---CCCcccc
Confidence            457899999999999999999999999988888  99988432         123578899999998764   3458999


Q ss_pred             HHHHHHHHHHHHhCCCCCCCCCchhhhHH------HHhhc-----cccC----CCCCCCHHHHHHHHHHhcCCCCCCCCH
Q psy12581         77 MWSFAVLLWELATREVPFADLTPMEVGMK------VALEG-----LRIT----IPPGISSHLSKLIRICMNEDPGKRPTF  141 (153)
Q Consensus        77 v~s~g~~~~~~~~g~~p~~~~~~~~~~~~------~~~~~-----~~~~----~~~~~~~~~~~l~~~cl~~~p~~Rps~  141 (153)
                      +||+|+++|++++|+.||.+.........      .....     ....    .+...+..+.+++.+||+.||++|||+
T Consensus       224 i~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~  303 (321)
T 2qkw_B          224 VYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSM  303 (321)
T ss_dssp             HHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTCCCSSSSSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCH
T ss_pred             hHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccccccHHHhcChhhccccCHHHHHHHHHHHHHHcCCCcccCcCH
Confidence            99999999999999999976443221110      00000     0111    122234678899999999999999999


Q ss_pred             HHHHHHHhhhh
Q psy12581        142 DMVLPILDKMK  152 (153)
Q Consensus       142 ~~~l~~L~~~~  152 (153)
                      .++++.|+.+.
T Consensus       304 ~ell~~L~~~l  314 (321)
T 2qkw_B          304 GDVLWKLEYAL  314 (321)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHHh
Confidence            99999998764

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=99.95  E-value=2.3e-27  Score=159.31  Aligned_cols=137  Identities=20%  Similarity=0.241  Sum_probs=110.4

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccc---hhhccccccccccc------CCcccCCcccCccccccCCCCCCcchh
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLT---ARINMADAQFSFQQ------RGRCYYPAWMSPEALQKKPGDRNLEAC   75 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~---~kl~~~d~g~~~~~------~~~~~~~~~~~pe~~~~~~~~~~~~~~   75 (153)
                      ..-++.|||++++.|+||.+.||+++.++.   +|+.  |||.+...      ....+++.|++||.+.+.   .++.++
T Consensus       114 i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~~~kl~--Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~  188 (284)
T 3kk8_A          114 ILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLA--DFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKD---PYSKPV  188 (284)
T ss_dssp             HHHHHHHHHHTTEECSCCCGGGEEESSSSTTCCEEEC--CCTTCEECCSSCBCCCSCSCGGGCCHHHHTTC---CBCTHH
T ss_pred             HHHHHHHHHHCCcCcCCCCHHHEEEecCCCCCcEEEe--eceeeEEcccCccccCCCCCcCCcCchhhcCC---CCCccc
Confidence            345789999999999999999999987655   6666  99998432      234688999999998764   345899


Q ss_pred             hHHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCC--CCCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581         76 DMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITI--PPGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus        76 dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      |+||+|++++++++|..||.+.........+.......+.  ....++.+.+++.+||+.||++|||++++++
T Consensus       189 Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~  261 (284)
T 3kk8_A          189 DIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALK  261 (284)
T ss_dssp             HHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             chHHHHHHHHHHHHCCCCCCCCchhHHHHHHHhccccCCchhhcccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence            9999999999999999999887766655555444333322  2467899999999999999999999999975

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=99.95  E-value=5e-28  Score=165.38  Aligned_cols=137  Identities=18%  Similarity=0.111  Sum_probs=110.9

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeecc--ccchhhcccccccccccC------CcccCCcccCccccccCCCCCCcchhh
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDE--DLTARINMADAQFSFQQR------GRCYYPAWMSPEALQKKPGDRNLEACD   76 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~--~~~~kl~~~d~g~~~~~~------~~~~~~~~~~pe~~~~~~~~~~~~~~d   76 (153)
                      ..-++.|||++++.|+||++.||+++.  ++.+|+.  |||++....      ...+++.|++||.+.+.   .++.++|
T Consensus       111 i~~al~~lH~~givH~Dlkp~NIl~~~~~~~~~kl~--Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~D  185 (321)
T 1tki_A          111 VCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKII--EFGQARQLKPGDNFRLLFTAPEYYAPEVHQHD---VVSTATD  185 (321)
T ss_dssp             HHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEEC--CCTTCEECCTTCEEEEEESCGGGSCHHHHTTC---EECHHHH
T ss_pred             HHHHHHHHHHCCCCcCCCCHHHEEEccCCCCCEEEE--ECCCCeECCCCCccccccCChhhcCcHHhcCC---CCCchhh
Confidence            345789999999999999999999997  5666666  999984432      23688999999998764   3458999


Q ss_pred             HHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccC--CCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581         77 MWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRIT--IPPGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus        77 v~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      +||+|+++|++++|..||.+.........+.......+  .....+..+.+++.+||..||++|||+.++++
T Consensus       186 iwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~  257 (321)
T 1tki_A          186 MWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQ  257 (321)
T ss_dssp             HHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHcCCCCCChhhhccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence            99999999999999999988777666655554433222  12467899999999999999999999999986

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=99.95  E-value=1.8e-27  Score=159.93  Aligned_cols=135  Identities=20%  Similarity=0.261  Sum_probs=112.2

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc-----CCcccCCcccCccccccCCCCCCcchhhHHH
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ-----RGRCYYPAWMSPEALQKKPGDRNLEACDMWS   79 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~-----~~~~~~~~~~~pe~~~~~~~~~~~~~~dv~s   79 (153)
                      ..-++.|||++++.|+||.+.||+++.++.+++.  |||.+...     ....+++.|++||.+.+.   .++.++|+||
T Consensus       123 i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~--Dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~s  197 (284)
T 2vgo_A          123 LADALHYCHERKVIHRDIKPENLLMGYKGELKIA--DFGWSVHAPSLRRRTMCGTLDYLPPEMIEGK---THDEKVDLWC  197 (284)
T ss_dssp             HHHHHHHHHTTTEECCCCSGGGEEECTTCCEEEC--CCTTCEECSSSCBCCCCSCGGGCCHHHHTTC---CBCTTHHHHH
T ss_pred             HHHHHHHHHHCCceecCCCHHHEEEcCCCCEEEe--cccccccCcccccccccCCCCcCCHHHhccC---CCCcccchhh
Confidence            3456899999999999999999999999988888  99987432     334688999999998764   3457899999


Q ss_pred             HHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581         80 FAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus        80 ~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      +|++++++++|..||...........+...  ....|...+..+.+++.+||..||++||+++++++
T Consensus       198 lG~il~~l~~g~~pf~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~  262 (284)
T 2vgo_A          198 AGVLCYEFLVGMPPFDSPSHTETHRRIVNV--DLKFPPFLSDGSKDLISKLLRYHPPQRLPLKGVME  262 (284)
T ss_dssp             HHHHHHHHHHSSCTTCCSSHHHHHHHHHTT--CCCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             HHHHHHHHHHCCCCCCCCCHhHHHHHHhcc--ccCCCCcCCHHHHHHHHHHhhcCHhhCCCHHHHhh
Confidence            999999999999999877665554444332  34556778999999999999999999999999985

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=99.95  E-value=2.3e-28  Score=166.83  Aligned_cols=143  Identities=22%  Similarity=0.308  Sum_probs=114.4

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc----------CCcccCCcccCccccccCCCCCCcch
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ----------RGRCYYPAWMSPEALQKKPGDRNLEA   74 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~----------~~~~~~~~~~~pe~~~~~~~~~~~~~   74 (153)
                      ..-++.|||++++.|+||.+.||+++.++.+|+.  |||.+...          ....++..|++||.+.+.   .++.+
T Consensus       143 l~~~l~~LH~~~ivH~Dikp~Nil~~~~~~~kl~--Dfg~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~  217 (318)
T 3lxp_A          143 ICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIG--DFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEY---KFYYA  217 (318)
T ss_dssp             HHHHHHHHHHTTEECSCCSGGGEEECTTCCEEEC--CGGGCEECCTTCSEEEC---CCCCGGGCCHHHHHHC---EEEHH
T ss_pred             HHHHHHHHHhCCccCCCCchheEEEcCCCCEEEC--CccccccccccccccccccCCCCCceeeChHHhcCC---CCCcH
Confidence            4557899999999999999999999999988888  99998432          223567789999998764   34588


Q ss_pred             hhHHHHHHHHHHHHhCCCCCCCCCch--------------hhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCC
Q psy12581         75 CDMWSFAVLLWELATREVPFADLTPM--------------EVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPT  140 (153)
Q Consensus        75 ~dv~s~g~~~~~~~~g~~p~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps  140 (153)
                      +|+||+|++++++++|..||......              .............+.+..++..+.+++.+||+.||++|||
T Consensus       218 ~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps  297 (318)
T 3lxp_A          218 SDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLPRPDKCPAEVYHLMKNCWETEASFRPT  297 (318)
T ss_dssp             HHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCC
T ss_pred             HHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHHHhcccCCCCCccccHHHHHHHHHHcCCCcccCcC
Confidence            99999999999999999998653211              0112233344456667788999999999999999999999


Q ss_pred             HHHHHHHHhhhh
Q psy12581        141 FDMVLPILDKMK  152 (153)
Q Consensus       141 ~~~~l~~L~~~~  152 (153)
                      +.++++.|+.+.
T Consensus       298 ~~ell~~L~~l~  309 (318)
T 3lxp_A          298 FENLIPILKTVH  309 (318)
T ss_dssp             HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHH
Confidence            999999998874

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=99.95  E-value=1.3e-27  Score=167.42  Aligned_cols=138  Identities=14%  Similarity=0.045  Sum_probs=109.3

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeec-cccchhhccccccccccc------CCcccCCcccCccccccCCCCCCcchhhH
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQID-EDLTARINMADAQFSFQQ------RGRCYYPAWMSPEALQKKPGDRNLEACDM   77 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~-~~~~~kl~~~d~g~~~~~------~~~~~~~~~~~pe~~~~~~~~~~~~~~dv   77 (153)
                      ..-++.|||++++.|+||++.||+++ .++.+||.  |||++...      ....+++.|+|||.+.+..  .++.++|+
T Consensus       150 i~~aL~~LH~~~ivHrDlkp~Nill~~~~~~~kL~--DFG~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~--~~~~~~Di  225 (394)
T 4e7w_A          150 LLRSLAYIHSIGICHRDIKPQNLLLDPPSGVLKLI--DFGSAKILIAGEPNVSYICSRYYRAPELIFGAT--NYTTNIDI  225 (394)
T ss_dssp             HHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEEC--CCTTCEECCTTCCCCSSCSCGGGCCHHHHTTCS--SCCTHHHH
T ss_pred             HHHHHHHHHHCCccCCCCCHHHEEEcCCCCcEEEe--eCCCcccccCCCCCcccccCcCccCHHHHcCCC--CCCcHHHH
Confidence            34578999999999999999999999 78888888  99998432      2346788999999986532  35689999


Q ss_pred             HHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccc---------------c------------CCCCCCCHHHHHHHHHH
Q psy12581         78 WSFAVLLWELATREVPFADLTPMEVGMKVALEGLR---------------I------------TIPPGISSHLSKLIRIC  130 (153)
Q Consensus        78 ~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~---------------~------------~~~~~~~~~~~~l~~~c  130 (153)
                      ||+|+++|++++|+.||.+.........+......               .            ..+...++.+.+++.+|
T Consensus       226 wSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  305 (394)
T 4e7w_A          226 WSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRL  305 (394)
T ss_dssp             HHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChhhhhhccccccCCcHHHhccccCCHHHHHHHHHH
Confidence            99999999999999999887766555443321000               0            12234788999999999


Q ss_pred             hcCCCCCCCCHHHHHH
Q psy12581        131 MNEDPGKRPTFDMVLP  146 (153)
Q Consensus       131 l~~~p~~Rps~~~~l~  146 (153)
                      |+.||++|||+.++++
T Consensus       306 L~~dP~~R~t~~e~l~  321 (394)
T 4e7w_A          306 LEYTPSARLTAIEALC  321 (394)
T ss_dssp             CCSSGGGSCCHHHHHT
T ss_pred             hCCChhhCCCHHHHhc
Confidence            9999999999999985

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=99.95  E-value=1.7e-27  Score=162.93  Aligned_cols=142  Identities=23%  Similarity=0.371  Sum_probs=113.9

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeecccc---chhhccccccccccc---------CCcccCCcccCccccccCCCCCCc
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDL---TARINMADAQFSFQQ---------RGRCYYPAWMSPEALQKKPGDRNL   72 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~---~~kl~~~d~g~~~~~---------~~~~~~~~~~~pe~~~~~~~~~~~   72 (153)
                      ..-++.|||++++.|+||.+.||+++.++   .+++.  |||.+...         ....+++.|++||.+.+.   .++
T Consensus       149 i~~al~~LH~~~i~H~dlkp~NIli~~~~~~~~~kl~--Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~  223 (327)
T 2yfx_A          149 IACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIG--DFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEG---IFT  223 (327)
T ss_dssp             HHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEEC--CCHHHHHHHC------CCGGGSCGGGCCHHHHHHC---CCC
T ss_pred             HHHHHHHHhhCCeecCcCCHhHEEEecCCCcceEEEC--ccccccccccccccccCCCcCCCcceeCHhHhcCC---CCC
Confidence            34578999999999999999999999554   35666  99987321         223567889999998764   355


Q ss_pred             chhhHHHHHHHHHHHHh-CCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHhhh
Q psy12581         73 EACDMWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKM  151 (153)
Q Consensus        73 ~~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~~~  151 (153)
                      .++|+||+|++++++++ |..||...........+ ........+...+..+.+++.+||..||++||++.++++.|+.+
T Consensus       224 ~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~  302 (327)
T 2yfx_A          224 SKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFV-TSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYC  302 (327)
T ss_dssp             HHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHH-HTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             chhhHHHHHHHHHHHHcCCCCCCCCcCHHHHHHHH-hcCCCCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHH
Confidence            89999999999999998 99999877655544433 34445556777899999999999999999999999999999876


Q ss_pred             h
Q psy12581        152 K  152 (153)
Q Consensus       152 ~  152 (153)
                      .
T Consensus       303 ~  303 (327)
T 2yfx_A          303 T  303 (327)
T ss_dssp             H
T ss_pred             h
Confidence            3

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=99.95  E-value=3.2e-27  Score=169.33  Aligned_cols=135  Identities=22%  Similarity=0.279  Sum_probs=110.2

Q ss_pred             hhHHhhhhcCCCCCCCeeeeeeeecc---ccchhhccccccccccc------CCcccCCcccCccccccCCCCCCcchhh
Q psy12581          6 IVYSFYLNSKKSKTSNAFLFCCQIDE---DLTARINMADAQFSFQQ------RGRCYYPAWMSPEALQKKPGDRNLEACD   76 (153)
Q Consensus         6 ~~~~~~lh~~~i~~~ni~~~~~~~~~---~~~~kl~~~d~g~~~~~------~~~~~~~~~~~pe~~~~~~~~~~~~~~d   76 (153)
                      .-++.|||++++.|+||++.||+++.   ++.+||.  |||++...      ....||+.|+|||.+.+    .++.++|
T Consensus       131 ~~al~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~--Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~D  204 (486)
T 3mwu_A          131 FSGITYMHKHNIVHRDLKPENILLESKEKDCDIKII--DFGLSTCFQQNTKMKDRIGTAYYIAPEVLRG----TYDEKCD  204 (486)
T ss_dssp             HHHHHHHHHTTCCCSCCSGGGEEESSSSTTCCEEEC--SCSCTTTBCCC----CCTTGGGGCCGGGGGS----CCCHHHH
T ss_pred             HHHHHHHHHCCeEeccCchHHEEEecCCCCCCEEEE--ECCcCeECCCCCccCCCcCCCCCCCHHHhCC----CCCchhh
Confidence            45789999999999999999999954   4456666  99988432      33478999999999875    3568999


Q ss_pred             HHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCC--CCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581         77 MWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIP--PGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus        77 v~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      +||+|+++|++++|..||.+.........+.........+  ...+..+.+++.+||+.+|++|||+.++++
T Consensus       205 iwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~  276 (486)
T 3mwu_A          205 VWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLE  276 (486)
T ss_dssp             HHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCSCSGGGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred             HHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCcccCCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence            9999999999999999998887776666655544433332  457899999999999999999999999986

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=99.95  E-value=1.9e-27  Score=167.75  Aligned_cols=137  Identities=15%  Similarity=0.049  Sum_probs=107.4

Q ss_pred             hhHHhhhhcCCCCCCCeeeeeeeeccc-cchhhccccccccccc------CCcccCCcccCccccccCCCCCCcchhhHH
Q psy12581          6 IVYSFYLNSKKSKTSNAFLFCCQIDED-LTARINMADAQFSFQQ------RGRCYYPAWMSPEALQKKPGDRNLEACDMW   78 (153)
Q Consensus         6 ~~~~~~lh~~~i~~~ni~~~~~~~~~~-~~~kl~~~d~g~~~~~------~~~~~~~~~~~pe~~~~~~~~~~~~~~dv~   78 (153)
                      .-++.|||+++|.|+||++.||+++.+ +.+||.  |||++...      ....+++.|++||.+.+.  ..++.++|+|
T Consensus       166 ~~aL~~LH~~~ivHrDlkp~NILl~~~~~~~kl~--DFG~a~~~~~~~~~~~~~~t~~y~aPE~~~~~--~~~~~~~Diw  241 (420)
T 1j1b_A          166 FRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLC--DFGSAKQLVRGEPNVSYICSRYYRAPELIFGA--TDYTSSIDVW  241 (420)
T ss_dssp             HHHHHHHHTTTEECSCCSGGGEEEETTTTEEEEC--CCTTCEECCTTCCCCSCCSCTTSCCHHHHTTC--SSCCTHHHHH
T ss_pred             HHHHHHHHHCCccccCCChhhEEEeCCCCeEEec--cchhhhhcccCCCceeeeeCCCcCCHHHHcCC--CCCCchhhhH
Confidence            457899999999999999999999965 556888  99998532      234678999999998653  2355899999


Q ss_pred             HHHHHHHHHHhCCCCCCCCCchhhhHHHHhhcc---------------ccC------------CCCCCCHHHHHHHHHHh
Q psy12581         79 SFAVLLWELATREVPFADLTPMEVGMKVALEGL---------------RIT------------IPPGISSHLSKLIRICM  131 (153)
Q Consensus        79 s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~---------------~~~------------~~~~~~~~~~~l~~~cl  131 (153)
                      |+|+++|++++|+.||.+.........+.....               ...            .+...+..+.+++.+||
T Consensus       242 SlG~il~ell~G~~pf~~~~~~~~l~~i~~~lg~p~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L  321 (420)
T 1j1b_A          242 SAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLL  321 (420)
T ss_dssp             HHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHHHHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHS
T ss_pred             HHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhc
Confidence            999999999999999988776555544432100               000            12356789999999999


Q ss_pred             cCCCCCCCCHHHHHH
Q psy12581        132 NEDPGKRPTFDMVLP  146 (153)
Q Consensus       132 ~~~p~~Rps~~~~l~  146 (153)
                      +.||++||++.++++
T Consensus       322 ~~dP~~R~t~~e~l~  336 (420)
T 1j1b_A          322 EYTPTARLTPLEACA  336 (420)
T ss_dssp             CSSGGGSCCHHHHHT
T ss_pred             cCChhHCCCHHHHhC
Confidence            999999999999974

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=99.95  E-value=8.5e-28  Score=164.39  Aligned_cols=138  Identities=17%  Similarity=0.174  Sum_probs=109.3

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc---------CCcccCCcccCccccccCCCCCCcchh
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ---------RGRCYYPAWMSPEALQKKPGDRNLEAC   75 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~---------~~~~~~~~~~~pe~~~~~~~~~~~~~~   75 (153)
                      ..-++.|||++++.|+||++.||+++.++.+||.  |||++...         ....|++.|++||.+.+...  .+.++
T Consensus       114 i~~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~--Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~--~~~~~  189 (323)
T 3tki_A          114 LMAGVVYLHGIGITHRDIKPENLLLDERDNLKIS--DFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF--HAEPV  189 (323)
T ss_dssp             HHHHHHHHHHTTEECSCCSGGGEEECTTCCEEEC--CCTTCEECEETTEECCBCSCCSCGGGSCHHHHHCSSB--CHHHH
T ss_pred             HHHHHHHHHHCCccccccchHHEEEeCCCCEEEE--EeeccceeccCCcccccCCCccCcCccCcHHhccCCC--CCCcc
Confidence            3457899999999999999999999999988888  99988421         24578999999999875422  25789


Q ss_pred             hHHHHHHHHHHHHhCCCCCCCCCchhhhHHHHh-hccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581         76 DMWSFAVLLWELATREVPFADLTPMEVGMKVAL-EGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus        76 dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      |+||+|+++|++++|..||.............. ...........+..+.+++.+||+.||++|||++++++
T Consensus       190 DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~  261 (323)
T 3tki_A          190 DVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKK  261 (323)
T ss_dssp             HHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHHTTCTTSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             cHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcccccCCccccCCHHHHHHHHHHccCChhhCcCHHHHhh
Confidence            999999999999999999987655433332222 22222233457899999999999999999999999875

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=99.95  E-value=1.8e-27  Score=165.59  Aligned_cols=137  Identities=14%  Similarity=0.052  Sum_probs=110.7

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeee--ccccchhhccccccccccc------CCcccCCcccCccccccCCCCCCcchhh
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQI--DEDLTARINMADAQFSFQQ------RGRCYYPAWMSPEALQKKPGDRNLEACD   76 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~--~~~~~~kl~~~d~g~~~~~------~~~~~~~~~~~pe~~~~~~~~~~~~~~d   76 (153)
                      ..-++.|||++++.|+||++.||++  +.++.+||.  |||++...      ....||+.|++||.+.+.   .++.++|
T Consensus       196 i~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~kl~--DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~D  270 (373)
T 2x4f_A          196 ICEGIRHMHQMYILHLDLKPENILCVNRDAKQIKII--DFGLARRYKPREKLKVNFGTPEFLAPEVVNYD---FVSFPTD  270 (373)
T ss_dssp             HHHHHHHHHHTTEECCCCCGGGEEEEETTTTEEEEC--CCSSCEECCTTCBCCCCCSSCTTCCHHHHTTC---BCCHHHH
T ss_pred             HHHHHHHHHHCCcccccCCHHHEEEecCCCCcEEEE--eCCCceecCCccccccccCCCcEeChhhccCC---CCCcHHh
Confidence            4457899999999999999999999  455667777  99998432      234689999999998753   4558999


Q ss_pred             HHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccC--CCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581         77 MWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRIT--IPPGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus        77 v~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      +||+|++++++++|..||.+.........+.......+  .....+..+.+++.+||+.||++|||+.++++
T Consensus       271 iwslG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~e~l~  342 (373)
T 2x4f_A          271 MWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLEDEEFQDISEEAKEFISKLLIKEKSWRISASEALK  342 (373)
T ss_dssp             HHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCSCSGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCChhhhccCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence            99999999999999999988877666666554433222  22457899999999999999999999999986

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=99.95  E-value=1.1e-27  Score=167.36  Aligned_cols=137  Identities=16%  Similarity=0.122  Sum_probs=109.8

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccc--cchhhcccccccccccC------CcccCCcccCccccccCCCCCCcchhh
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDED--LTARINMADAQFSFQQR------GRCYYPAWMSPEALQKKPGDRNLEACD   76 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~--~~~kl~~~d~g~~~~~~------~~~~~~~~~~pe~~~~~~~~~~~~~~d   76 (153)
                      ..-++.|||++++.|+||++.||+++.+  +.+||.  |||++....      ...+|+.|+|||.+.+.   .++.++|
T Consensus       158 i~~aL~~LH~~givHrDlkp~NIll~~~~~~~vkL~--DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~D  232 (387)
T 1kob_A          158 ACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKII--DFGLATKLNPDEIVKVTTATAEFAAPEIVDRE---PVGFYTD  232 (387)
T ss_dssp             HHHHHHHHHHTTEECCCCCGGGEEESSTTCCCEEEC--CCTTCEECCTTSCEEEECSSGGGCCHHHHTTC---CBCHHHH
T ss_pred             HHHHHHHHHhCCeeecccchHHeEEecCCCCceEEE--ecccceecCCCcceeeeccCCCccCchhccCC---CCCCccc
Confidence            3457899999999999999999999854  446666  999985432      23689999999998764   3458999


Q ss_pred             HHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccc--cCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581         77 MWSFAVLLWELATREVPFADLTPMEVGMKVALEGLR--ITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus        77 v~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      +||+|+++|++++|..||.+.........+......  .......+..+.+++.+||+.||++|||+.++++
T Consensus       233 iwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~  304 (387)
T 1kob_A          233 MWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALE  304 (387)
T ss_dssp             HHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHCCCCCCSSTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred             EeeHhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCccccccCCHHHHHHHHHHcCCChhHCcCHHHHhh
Confidence            999999999999999999887766655554433322  2233467899999999999999999999999985

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=99.94  E-value=8.4e-28  Score=164.83  Aligned_cols=146  Identities=24%  Similarity=0.367  Sum_probs=108.6

Q ss_pred             hhhHHhhhhcC--------CCCCCCeeeeeeeeccccchhhccccccccccc-----------CCcccCCcccCcccccc
Q psy12581          5 KIVYSFYLNSK--------KSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ-----------RGRCYYPAWMSPEALQK   65 (153)
Q Consensus         5 ~~~~~~~lh~~--------~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~-----------~~~~~~~~~~~pe~~~~   65 (153)
                      ..-++.|||++        ++.|+||++.||+++.++.+||.  |||++...           ....||+.|++||.+.+
T Consensus       143 i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl~--Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  220 (337)
T 3mdy_A          143 SVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIA--DLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDE  220 (337)
T ss_dssp             HHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEEEC--CCTTCEECC---------CCSSCSCGGGCCHHHHTT
T ss_pred             HHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEEEE--eCCCceeeccccccccCCCCCCccCcceeChhhccc
Confidence            34578999988        99999999999999999988888  99998322           13468999999999876


Q ss_pred             CCCCCC---cchhhHHHHHHHHHHHHhC----------CCCCCCCCchhh----hHHH-HhhccccCCCC-----CCCHH
Q psy12581         66 KPGDRN---LEACDMWSFAVLLWELATR----------EVPFADLTPMEV----GMKV-ALEGLRITIPP-----GISSH  122 (153)
Q Consensus        66 ~~~~~~---~~~~dv~s~g~~~~~~~~g----------~~p~~~~~~~~~----~~~~-~~~~~~~~~~~-----~~~~~  122 (153)
                      ......   +.++|+||+|+++|++++|          ..||........    .... .........+.     ..+..
T Consensus       221 ~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  300 (337)
T 3mdy_A          221 SLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSDPSYEDMREIVCIKKLRPSFPNRWSSDECLRQ  300 (337)
T ss_dssp             CCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGSHHHHH
T ss_pred             ccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHhhhcCCCCchhhhHHHHhhhccCccccccchhhHHHHH
Confidence            433211   1248999999999999999          667755332221    1111 11222333332     34567


Q ss_pred             HHHHHHHHhcCCCCCCCCHHHHHHHHhhhh
Q psy12581        123 LSKLIRICMNEDPGKRPTFDMVLPILDKMK  152 (153)
Q Consensus       123 ~~~l~~~cl~~~p~~Rps~~~~l~~L~~~~  152 (153)
                      +.+++.+||+.||++|||+.++++.|+++.
T Consensus       301 l~~li~~~l~~dP~~Rps~~ell~~L~~l~  330 (337)
T 3mdy_A          301 MGKLMTECWAHNPASRLTALRVKKTLAKMS  330 (337)
T ss_dssp             HHHHHHHHSCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHHHHhhhhChhhCCCHHHHHHHHHHHH
Confidence            999999999999999999999999999875

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=99.94  E-value=1.5e-27  Score=162.99  Aligned_cols=140  Identities=18%  Similarity=0.233  Sum_probs=108.3

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc-------CCcccCCcccCccccccCC--CCCCcchh
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ-------RGRCYYPAWMSPEALQKKP--GDRNLEAC   75 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~-------~~~~~~~~~~~pe~~~~~~--~~~~~~~~   75 (153)
                      ..-++.|||++++.|+||.+.||+++.++.+|+.  |||++...       ....+++.|++||.+....  ...++.++
T Consensus       138 i~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~kl~--Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~  215 (326)
T 2x7f_A          138 ILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLV--DFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKS  215 (326)
T ss_dssp             HHHHHHHHHHTTCCCCCCSGGGEEECTTCCEEEC--CCTTTC-------------CCGGGCCHHHHC--------CCTTH
T ss_pred             HHHHHHHHHHCCccccCCcHHHEEEcCCCCEEEe--eCcCceecCcCccccccccCCccccChhhhccccccCcCCCccc
Confidence            3457899999999999999999999999988888  99987432       2336889999999986321  12456889


Q ss_pred             hHHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581         76 DMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus        76 dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      |+||+|+++|++++|..||...........+.........+..++..+.+++.+||..||++||++.++++
T Consensus       216 Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  286 (326)
T 2x7f_A          216 DLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPAPRLKSKKWSKKFQSFIESCLVKNHSQRPATEQLMK  286 (326)
T ss_dssp             HHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCSCSCSCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred             hHHHHHHHHHHHHhCCCCCCCCcHHHHHHHhhcCccccCCccccCHHHHHHHHHHhccChhhCCCHHHHhh
Confidence            99999999999999999998776655544444333333334568899999999999999999999999986

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=99.94  E-value=8.4e-27  Score=158.05  Aligned_cols=137  Identities=22%  Similarity=0.252  Sum_probs=110.4

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeee---ccccchhhcccccccccccCC-----cccCCcccCccccccCCCCCCcchhh
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQI---DEDLTARINMADAQFSFQQRG-----RCYYPAWMSPEALQKKPGDRNLEACD   76 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~---~~~~~~kl~~~d~g~~~~~~~-----~~~~~~~~~pe~~~~~~~~~~~~~~d   76 (153)
                      ..-++.|||++++.|+||.+.||++   +.++.+++.  |||.+.....     ..+++.|++||.+.+.   .++.++|
T Consensus       115 i~~~l~~lH~~~i~H~dikp~NIl~~~~~~~~~~kl~--Dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~D  189 (304)
T 2jam_A          115 VLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMIT--DFGLSKMEQNGIMSTACGTPGYVAPEVLAQK---PYSKAVD  189 (304)
T ss_dssp             HHHHHHHHHHTTCCCCSCCGGGCEESSSSTTCCEEBC--SCSTTCCCCCBTTHHHHSCCCBCCTTTBSSC---SCCHHHH
T ss_pred             HHHHHHHHHHCCccccCCCHHHEEEecCCCCCCEEEc--cCCcceecCCCccccccCCCCccChHHhccC---CCCchhh
Confidence            3457899999999999999999999   667777777  9998854322     2588999999998764   4558999


Q ss_pred             HHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhcccc--CCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581         77 MWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRI--TIPPGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus        77 v~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      +||+|++++++++|..||.+.........+.......  +.+...+..+.+++.+||..||++|||++++++
T Consensus       190 i~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~  261 (304)
T 2jam_A          190 CWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYEFESPFWDDISESAKDFICHLLEKDPNERYTCEKALS  261 (304)
T ss_dssp             HHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHCCCCCCTTTTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred             HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCccccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence            9999999999999999998877666555544433322  233567899999999999999999999999985

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=99.94  E-value=3.5e-27  Score=158.94  Aligned_cols=136  Identities=16%  Similarity=0.251  Sum_probs=109.5

Q ss_pred             hhhHHhhhhcCC--CCCCCeeeeeeeec-cccchhhcccccccccccC-----CcccCCcccCccccccCCCCCCcchhh
Q psy12581          5 KIVYSFYLNSKK--SKTSNAFLFCCQID-EDLTARINMADAQFSFQQR-----GRCYYPAWMSPEALQKKPGDRNLEACD   76 (153)
Q Consensus         5 ~~~~~~~lh~~~--i~~~ni~~~~~~~~-~~~~~kl~~~d~g~~~~~~-----~~~~~~~~~~pe~~~~~~~~~~~~~~d   76 (153)
                      ..-++.|||+++  +.|+||.+.||+++ .++.+++.  |||++....     ...+++.|++||.+.+    .++.++|
T Consensus       138 i~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~kl~--Dfg~~~~~~~~~~~~~~~t~~y~aPE~~~~----~~~~~~D  211 (290)
T 1t4h_A          138 ILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIG--DLGLATLKRASFAKAVIGTPEFMAPEMYEE----KYDESVD  211 (290)
T ss_dssp             HHHHHHHHHTSSSCCCCSCCCGGGEEESSTTSCEEEC--CTTGGGGCCTTSBEESCSSCCCCCGGGGGT----CCCTHHH
T ss_pred             HHHHHHHHHcCCCCEEECCCCHHHEEEECCCCCEEEe--eCCCcccccccccccccCCcCcCCHHHHhc----cCCCcch
Confidence            345789999999  99999999999998 78888888  999984332     2368899999998864    3568999


Q ss_pred             HHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhcc-ccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581         77 MWSFAVLLWELATREVPFADLTPMEVGMKVALEGL-RITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus        77 v~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      +||+|++++++++|..||................. ....+...++.+.+++.+||+.||++|||++++++
T Consensus       212 i~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~  282 (290)
T 1t4h_A          212 VYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLN  282 (290)
T ss_dssp             HHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCCGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             HHHHHHHHHHHHhCCCCCCCcCcHHHHHHHHhccCCccccCCCCCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence            99999999999999999987655554444333332 23345567789999999999999999999999985

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=99.94  E-value=1.6e-27  Score=170.47  Aligned_cols=142  Identities=11%  Similarity=0.077  Sum_probs=111.8

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeee---ccccchhhccccccccccc--------------CCcccCCcccCccccccCC
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQI---DEDLTARINMADAQFSFQQ--------------RGRCYYPAWMSPEALQKKP   67 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~---~~~~~~kl~~~d~g~~~~~--------------~~~~~~~~~~~pe~~~~~~   67 (153)
                      ..-++.|||+++|.|+||++.||++   +.++.+||.  |||++...              ....|++.|++||.+.+. 
T Consensus       112 i~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~--DFGla~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-  188 (483)
T 3sv0_A          112 MINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYII--DFGLAKKYRDTSTHQHIPYRENKNLTGTARYASVNTHLGI-  188 (483)
T ss_dssp             HHHHHHHHHHTTEECCCCCGGGEEECCGGGTTCEEEC--CCTTCEECBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTC-
T ss_pred             HHHHHHHHHHCCEeecccCcceEEEecCCCCCeEEEE--eCCcceeccCCccccccccccccccCCCccccCHHHhcCC-
Confidence            4557899999999999999999999   577777877  99998322              144689999999998864 


Q ss_pred             CCCCcchhhHHHHHHHHHHHHhCCCCCCCCCchhh---hHHHHhhcc---ccCCCCCCCHHHHHHHHHHhcCCCCCCCCH
Q psy12581         68 GDRNLEACDMWSFAVLLWELATREVPFADLTPMEV---GMKVALEGL---RITIPPGISSHLSKLIRICMNEDPGKRPTF  141 (153)
Q Consensus        68 ~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~---~~~~~~~~~---~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~  141 (153)
                        .++.++|+||+|+++|++++|..||.+......   ...+.....   ....+..++.++.+++..||..+|++||++
T Consensus       189 --~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dP~~RPs~  266 (483)
T 3sv0_A          189 --EQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVATSIEALCRGYPTEFASYFHYCRSLRFDDKPDY  266 (483)
T ss_dssp             --CCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHHHHHSCHHHHHTTSCHHHHHHHHHHHTCCTTCCCCH
T ss_pred             --CCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhccccccHHHHhcCCcHHHHHHHHHHhcCChhhCcCH
Confidence              355899999999999999999999987554322   122221111   112235678899999999999999999999


Q ss_pred             HHHHHHHhhh
Q psy12581        142 DMVLPILDKM  151 (153)
Q Consensus       142 ~~~l~~L~~~  151 (153)
                      .++++.|+++
T Consensus       267 ~el~~~L~~l  276 (483)
T 3sv0_A          267 SYLKRLFRDL  276 (483)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHH
Confidence            9999999876

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=99.94  E-value=3.2e-27  Score=166.60  Aligned_cols=140  Identities=19%  Similarity=0.191  Sum_probs=103.0

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeecccc---chhhccccccccccc------CCcccCCcccCccccccCCCCCCcchh
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDL---TARINMADAQFSFQQ------RGRCYYPAWMSPEALQKKPGDRNLEAC   75 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~---~~kl~~~d~g~~~~~------~~~~~~~~~~~pe~~~~~~~~~~~~~~   75 (153)
                      ..-++.|||++++.|+||++.||+++.++   .+|+.  |||++...      ...+||+.|+|||.+.+.....++.++
T Consensus       248 i~~~l~~LH~~~ivHrDlkp~NIll~~~~~~~~~kl~--DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~  325 (419)
T 3i6u_A          248 MLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKIT--DFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAV  325 (419)
T ss_dssp             HHHHHHHHHHTTCCCSCCCGGGEEESSSSSSCCEEEC--CSSTTTSCC-----------CTTCCTTTTC----CTTHHHH
T ss_pred             HHHHHHHHHHCCccccCCChHhEEEecCCCcceEEEe--ecccceecCCCccccccCCCCCccCceeeecCCCCCCCchh
Confidence            34578999999999999999999997654   36666  99998433      234789999999998643334567899


Q ss_pred             hHHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhcccc---CCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581         76 DMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRI---TIPPGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus        76 dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      |+||+|+++|++++|..||.+.............+...   ......+..+.+++.+||+.||++|||++++++
T Consensus       326 DiwslG~il~~lltg~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~  399 (419)
T 3i6u_A          326 DCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALR  399 (419)
T ss_dssp             HHHHHHHHHHHHHHSSCSSCCCSSSCCHHHHHHTTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             hhHhHHHHHHHHHHCCCCCCCCcchHHHHHHHhcCCCCCCchhhcccCHHHHHHHHHHccCChhHCcCHHHHhC
Confidence            99999999999999999997755443333333332211   112457899999999999999999999999985

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=99.94  E-value=3e-27  Score=163.22  Aligned_cols=137  Identities=20%  Similarity=0.157  Sum_probs=102.9

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeecc---ccchhhccccccccccc------CCcccCCcccCccccccCCCCCCcchh
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDE---DLTARINMADAQFSFQQ------RGRCYYPAWMSPEALQKKPGDRNLEAC   75 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~---~~~~kl~~~d~g~~~~~------~~~~~~~~~~~pe~~~~~~~~~~~~~~   75 (153)
                      ..-++.|||++++.|+||++.||+++.   ++.+||.  |||++...      ....|++.|++||.+.+.   .++.++
T Consensus       157 i~~~L~~LH~~~ivH~Dikp~NIll~~~~~~~~~kl~--Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~  231 (349)
T 2w4o_A          157 ILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIA--DFGLSKIVEHQVLMKTVCGTPGYCAPEILRGC---AYGPEV  231 (349)
T ss_dssp             HHHHHHHHHHTTCCCCCCCGGGEEESSSSTTCCEEEC--CCC----------------CGGGSCHHHHTTC---CCCTHH
T ss_pred             HHHHHHHHHHCCeEecCCCcccEEEecCCCCCCEEEc--cCccccccCcccccccccCCCCccCHHHhcCC---CCCccc
Confidence            345789999999999999999999975   6777777  99998432      234689999999998864   355899


Q ss_pred             hHHHHHHHHHHHHhCCCCCCCCCchhh-hHHHHhhcccc--CCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581         76 DMWSFAVLLWELATREVPFADLTPMEV-GMKVALEGLRI--TIPPGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus        76 dv~s~g~~~~~~~~g~~p~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      |+||+|+++|++++|..||........ ...+.......  +.....+..+.+++.+||+.||++|||+.++++
T Consensus       232 DiwslG~il~ell~g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  305 (349)
T 2w4o_A          232 DMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYFISPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQ  305 (349)
T ss_dssp             HHHHHHHHHHHHHHSSCTTCCTTCHHHHHHHHHTTCCCCCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             chHHHHHHHHHHHhCCCCCCCCcccHHHHHHHHhCCCccCCchhhhCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            999999999999999999977665443 23333322222  223467899999999999999999999999986

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=99.94  E-value=3.5e-27  Score=169.38  Aligned_cols=135  Identities=23%  Similarity=0.282  Sum_probs=110.3

Q ss_pred             hhHHhhhhcCCCCCCCeeeeeeeecccc---chhhccccccccccc------CCcccCCcccCccccccCCCCCCcchhh
Q psy12581          6 IVYSFYLNSKKSKTSNAFLFCCQIDEDL---TARINMADAQFSFQQ------RGRCYYPAWMSPEALQKKPGDRNLEACD   76 (153)
Q Consensus         6 ~~~~~~lh~~~i~~~ni~~~~~~~~~~~---~~kl~~~d~g~~~~~------~~~~~~~~~~~pe~~~~~~~~~~~~~~d   76 (153)
                      .-++.|||++++.|+||++.||+++..+   .+|+.  |||++...      ....||+.|+|||.+.+    .++.++|
T Consensus       146 ~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~--DfG~a~~~~~~~~~~~~~gt~~y~aPE~l~~----~~~~~~D  219 (494)
T 3lij_A          146 LSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIV--DFGLSAVFENQKKMKERLGTAYYIAPEVLRK----KYDEKCD  219 (494)
T ss_dssp             HHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEEC--CCTTCEECBTTBCBCCCCSCTTTCCHHHHTT----CBCTHHH
T ss_pred             HHHHHHHHHCCceeccCChhhEEEeCCCCCCcEEEE--ECCCCeECCCCccccccCCCcCeeCHHHHcc----cCCCchh
Confidence            4578999999999999999999997644   36666  99988432      34578999999999864    4568999


Q ss_pred             HHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCC--CCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581         77 MWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIP--PGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus        77 v~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      +||+|+++|++++|..||.+.........+.........+  ...+..+.+++.+||+.+|++|||+.++++
T Consensus       220 iwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~  291 (494)
T 3lij_A          220 VWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFDSPEWKNVSEGAKDLIKQMLQFDSQRRISAQQALE  291 (494)
T ss_dssp             HHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCSGGGTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             HHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCchhcccCCHHHHHHHHHHCCCChhhCccHHHHhc
Confidence            9999999999999999999888777666655544433322  457899999999999999999999999884

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=99.94  E-value=5.1e-28  Score=165.96  Aligned_cols=146  Identities=19%  Similarity=0.221  Sum_probs=107.0

Q ss_pred             hhhHHhhhhcC---------CCCCCCeeeeeeeeccccchhhcccccccccccC---------------CcccCCcccCc
Q psy12581          5 KIVYSFYLNSK---------KSKTSNAFLFCCQIDEDLTARINMADAQFSFQQR---------------GRCYYPAWMSP   60 (153)
Q Consensus         5 ~~~~~~~lh~~---------~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~---------------~~~~~~~~~~p   60 (153)
                      ..-++.|||++         ++.|+||++.||+++.++.+||.  |||++....               ...||+.|+||
T Consensus       120 i~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~--DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP  197 (336)
T 3g2f_A          120 VTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVIS--DFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAP  197 (336)
T ss_dssp             HHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEEEC--CCTTCEECSSSSCC---------CCTTSCGGGCCH
T ss_pred             HHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEEEe--eccceeecccccccCccccccccccCCCccceeCc
Confidence            34578999999         99999999999999999988888  999984321               23689999999


Q ss_pred             cccccCCC----CCCcchhhHHHHHHHHHHHHhCCCCCCCCCch-----------------hhhHH-HHhhccccCCCCC
Q psy12581         61 EALQKKPG----DRNLEACDMWSFAVLLWELATREVPFADLTPM-----------------EVGMK-VALEGLRITIPPG  118 (153)
Q Consensus        61 e~~~~~~~----~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~-----------------~~~~~-~~~~~~~~~~~~~  118 (153)
                      |.+.+...    ..++.++|+||+|+++|++++|..|+......                 ..... .......+..|..
T Consensus       198 E~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  277 (336)
T 3g2f_A          198 EVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEA  277 (336)
T ss_dssp             HHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTT
T ss_pred             hhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchhHHHHhhhcccCCCchHHHHHhhhcccccCCCCCcc
Confidence            99875211    12346799999999999999996665322110                 00011 1112223333333


Q ss_pred             ------CCHHHHHHHHHHhcCCCCCCCCHHHHHHHHhhhh
Q psy12581        119 ------ISSHLSKLIRICMNEDPGKRPTFDMVLPILDKMK  152 (153)
Q Consensus       119 ------~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~~~~  152 (153)
                            .+..+.+++.+||..||++|||+.++++.|+++.
T Consensus       278 ~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll  317 (336)
T 3g2f_A          278 WKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELM  317 (336)
T ss_dssp             CCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHH
T ss_pred             cccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHH
Confidence                  2347999999999999999999999999998874

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=99.94  E-value=1.6e-27  Score=170.81  Aligned_cols=136  Identities=22%  Similarity=0.274  Sum_probs=111.4

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeec---cccchhhcccccccccccC------CcccCCcccCccccccCCCCCCcchh
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQID---EDLTARINMADAQFSFQQR------GRCYYPAWMSPEALQKKPGDRNLEAC   75 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~---~~~~~kl~~~d~g~~~~~~------~~~~~~~~~~pe~~~~~~~~~~~~~~   75 (153)
                      ..-++.|||++++.|+||++.||+++   .++.+||.  |||++....      ...||+.|+|||.+.+    .++.++
T Consensus       135 i~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~--Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~  208 (484)
T 3nyv_A          135 VLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRII--DFGLSTHFEASKKMKDKIGTAYYIAPEVLHG----TYDEKC  208 (484)
T ss_dssp             HHHHHHHHHHTTCCCSCCCGGGEEESSSSTTCCEEEC--CTTHHHHBCCCCSHHHHTTGGGTCCHHHHHT----CCCTHH
T ss_pred             HHHHHHHHHHCCeeeCCCCHHHEEEecCCCCCcEEEE--eeeeeEEcccccccccCCCCccccCceeecC----CCCCcc
Confidence            34578999999999999999999994   56677777  999884322      2368999999999875    356899


Q ss_pred             hHHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCC--CCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581         76 DMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIP--PGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus        76 dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      |+||+|+++|++++|..||.+.........+.........+  ...+..+.+++.+||+.+|++|||+.++++
T Consensus       209 DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~  281 (484)
T 3nyv_A          209 DVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALD  281 (484)
T ss_dssp             HHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCSGGGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             eeHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhh
Confidence            99999999999999999999887777666665544433333  457899999999999999999999999984

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=99.94  E-value=6.3e-28  Score=170.76  Aligned_cols=140  Identities=19%  Similarity=0.214  Sum_probs=113.4

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc--------CCcccCCcccCccccccCC--CCCCcch
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ--------RGRCYYPAWMSPEALQKKP--GDRNLEA   74 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~--------~~~~~~~~~~~pe~~~~~~--~~~~~~~   74 (153)
                      ...++.|||+++|+|+||++.||+++.++.+||.  |||++...        ...+||+.|+|||.+....  ...++.+
T Consensus       184 i~~aL~~LH~~giiHrDLKp~NILl~~~g~vkL~--DFGla~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~  261 (437)
T 4aw2_A          184 MVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLA--DFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPE  261 (437)
T ss_dssp             HHHHHHHHHHTTEECCCCSGGGEEECTTSCEEEC--CCTTCEECCTTSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTH
T ss_pred             HHHHHHHHHhCCeEecccCHHHeeEcCCCCEEEc--chhhhhhcccCCCcccccccCCcCeeChHHHhhcccCCCCCCCc
Confidence            4567899999999999999999999999999988  99988432        2357999999999986211  1235689


Q ss_pred             hhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCC---CCCCHHHHHHHHHHhcCCCCC--CCCHHHHHH
Q psy12581         75 CDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIP---PGISSHLSKLIRICMNEDPGK--RPTFDMVLP  146 (153)
Q Consensus        75 ~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~cl~~~p~~--Rps~~~~l~  146 (153)
                      +|+||+|+++||+++|+.||.+....+....+.........|   ...++.+.+++.+||..+|++  |++++++++
T Consensus       262 ~DvwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~  338 (437)
T 4aw2_A          262 CDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPTQVTDVSENAKDLIRRLICSREHRLGQNGIEDFKK  338 (437)
T ss_dssp             HHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCCCCSSCCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHT
T ss_pred             CeeHHHHHHHHHHHhCCCCCCCCChhHHHHhhhhccccccCCcccccCCHHHHHHHHHHhcccccccCCCCHHHHhC
Confidence            999999999999999999999888777766665433333333   458999999999999988887  899998875

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=99.94  E-value=1.8e-27  Score=162.77  Aligned_cols=138  Identities=14%  Similarity=0.088  Sum_probs=106.6

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc-------CCcccCCcccCccccccCCCCCCcchhhH
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ-------RGRCYYPAWMSPEALQKKPGDRNLEACDM   77 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~-------~~~~~~~~~~~pe~~~~~~~~~~~~~~dv   77 (153)
                      ..-++.|||++++.|+||++.||+++.++.+|+.  |||.+...       ....+++.|++||.+.+.  ..++.++|+
T Consensus       109 i~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~--Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~--~~~~~~~Di  184 (324)
T 3mtl_A          109 LLRGLAYCHRQKVLHRDLKPQNLLINERGELKLA--DFGLARAKSIPTKTYDNEVVTLWYRPPDILLGS--TDYSTQIDM  184 (324)
T ss_dssp             HHHHHHHHHHTTEEESSCCGGGEEECTTCCEEEC--SSSEEECC------------CGGGCCHHHHTTC--CCCCTHHHH
T ss_pred             HHHHHHHHHHCCccCCCcCHHHEEECCCCCEEEc--cCcccccccCCccccccccCcccccChhhhcCC--CCCCcHHHH
Confidence            3457899999999999999999999999988888  99998432       233678999999998653  235689999


Q ss_pred             HHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhcccc----------------------------CCCCCCCHHHHHHHHH
Q psy12581         78 WSFAVLLWELATREVPFADLTPMEVGMKVALEGLRI----------------------------TIPPGISSHLSKLIRI  129 (153)
Q Consensus        78 ~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~----------------------------~~~~~~~~~~~~l~~~  129 (153)
                      ||+|++++++++|..||.+.........+......+                            ......+..+.+++.+
T Consensus       185 wslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  264 (324)
T 3mtl_A          185 WGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTK  264 (324)
T ss_dssp             HHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCHHHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHH
T ss_pred             HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHhchhhhcchhhcccccccccchhhhhhcCCCCHHHHHHHHH
Confidence            999999999999999998877665544433211100                            0112467889999999


Q ss_pred             HhcCCCCCCCCHHHHHH
Q psy12581        130 CMNEDPGKRPTFDMVLP  146 (153)
Q Consensus       130 cl~~~p~~Rps~~~~l~  146 (153)
                      ||+.||++|||++++++
T Consensus       265 ~L~~dP~~R~t~~e~l~  281 (324)
T 3mtl_A          265 LLQFEGRNRISAEDAMK  281 (324)
T ss_dssp             HSCSSGGGSCCHHHHTT
T ss_pred             HcCcCcccCCCHHHHhc
Confidence            99999999999999975

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=99.94  E-value=3e-27  Score=159.45  Aligned_cols=138  Identities=12%  Similarity=0.086  Sum_probs=105.0

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc-------CCcccCCcccCccccccCCCCCCcchhhH
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ-------RGRCYYPAWMSPEALQKKPGDRNLEACDM   77 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~-------~~~~~~~~~~~pe~~~~~~~~~~~~~~dv   77 (153)
                      ..-++.|||++++.|+||++.||+++.++.+|+.  |||.+...       ....+|+.|++||.+.+..  .++.++|+
T Consensus       110 l~~~l~~lH~~~ivH~dikp~Nil~~~~~~~kl~--Dfg~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~--~~~~~~Di  185 (292)
T 3o0g_A          110 LLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLA--NFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAK--LYSTSIDM  185 (292)
T ss_dssp             HHHHHHHHHHTTEECCCCSGGGEEECTTSCEEEC--CCTTCEECCSCCSCCCSCCSCGGGCCHHHHTTCS--CCCTHHHH
T ss_pred             HHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEe--ecccceecCCccccccCCccccCCcChHHHcCCC--CcCchHHH
Confidence            3457899999999999999999999999998888  99998432       2346788999999987532  24689999


Q ss_pred             HHHHHHHHHHHhCCCCC-CCCCchhhhHHHHhhccc---------------------------cCCCCCCCHHHHHHHHH
Q psy12581         78 WSFAVLLWELATREVPF-ADLTPMEVGMKVALEGLR---------------------------ITIPPGISSHLSKLIRI  129 (153)
Q Consensus        78 ~s~g~~~~~~~~g~~p~-~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~~~~~l~~~  129 (153)
                      ||+|++++++++|..|+ .+.........+......                           .......+..+.+++.+
T Consensus       186 wslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  265 (292)
T 3o0g_A          186 WSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQN  265 (292)
T ss_dssp             HHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhcccccccccccccCCcchhhcccccChHHHHHHHH
Confidence            99999999999887775 444433333332221000                           01123467899999999


Q ss_pred             HhcCCCCCCCCHHHHHH
Q psy12581        130 CMNEDPGKRPTFDMVLP  146 (153)
Q Consensus       130 cl~~~p~~Rps~~~~l~  146 (153)
                      ||+.||++|||++++++
T Consensus       266 ~L~~dP~~R~t~~e~l~  282 (292)
T 3o0g_A          266 LLKCNPVQRISAEEALQ  282 (292)
T ss_dssp             HSCSSGGGSCCHHHHHT
T ss_pred             HhccChhhCCCHHHHhc
Confidence            99999999999999985

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=99.94  E-value=2.3e-27  Score=165.81  Aligned_cols=139  Identities=18%  Similarity=0.267  Sum_probs=104.8

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc--------------CCcccCCcccCccccccCCCCC
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ--------------RGRCYYPAWMSPEALQKKPGDR   70 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~--------------~~~~~~~~~~~pe~~~~~~~~~   70 (153)
                      ..-++.|||+++|.|+||++.||+++.++.+|+.  |||.+...              ....+++.|++||.+.+.. ..
T Consensus       137 i~~~l~~LH~~~ivHrDlkp~NIll~~~~~~kl~--dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~  213 (389)
T 3gni_B          137 VLKALDYIHHMGYVHRSVKASHILISVDGKVYLS--GLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNL-QG  213 (389)
T ss_dssp             HHHHHHHHHHTTEECCCCSGGGEEECTTCCEEEC--CGGGCEECEETTEECSCBCCCCTTCTTTGGGSCHHHHSTTS-SC
T ss_pred             HHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEc--ccccceeeccccccccccccccccccccccccCHHHHhccC-CC
Confidence            3457899999999999999999999999988888  99986321              1236788899999987521 23


Q ss_pred             CcchhhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhcc---------------------------------------
Q psy12581         71 NLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGL---------------------------------------  111 (153)
Q Consensus        71 ~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~---------------------------------------  111 (153)
                      ++.++|+||+|+++|++++|..||.+...............                                       
T Consensus       214 ~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  293 (389)
T 3gni_B          214 YDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPS  293 (389)
T ss_dssp             BCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC--------------------------------------------
T ss_pred             CCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCccccccccccccccccccccccccccccccccCccccc
Confidence            56899999999999999999999987655444333221110                                       


Q ss_pred             -----ccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581        112 -----RITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus       112 -----~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                           ..+.+...++.+.+++.+||+.||++|||++++++
T Consensus       294 ~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~  333 (389)
T 3gni_B          294 NGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLN  333 (389)
T ss_dssp             ------------CCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred             cCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhc
Confidence                 01123456788999999999999999999999974

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=99.94  E-value=2.2e-27  Score=164.60  Aligned_cols=138  Identities=14%  Similarity=0.096  Sum_probs=108.8

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc----------CCcccCCcccCccccccCCCCCCcch
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ----------RGRCYYPAWMSPEALQKKPGDRNLEA   74 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~----------~~~~~~~~~~~pe~~~~~~~~~~~~~   74 (153)
                      ..-++.|||++++.|+||++.||+++.++.+||.  |||.+...          ....+|+.|++||.+.+..  .++.+
T Consensus       137 i~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~--Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~  212 (364)
T 3qyz_A          137 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKIC--DFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK--GYTKS  212 (364)
T ss_dssp             HHHHHHHHHHTTEECCCCCGGGEEECTTCCEEEC--CCTTCEECCGGGCBCCTTCCCCSCGGGCCHHHHHTBC--SCSTH
T ss_pred             HHHHHHHHHHCCeecCCCChHhEEECCCCCEEEE--eCcceEecCCCCCccccccccccccCCCCCHHhcCCC--CCCcc
Confidence            3457899999999999999999999999998888  99998432          2337899999999875432  35589


Q ss_pred             hhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhcccc-----------------------------CCCCCCCHHHHH
Q psy12581         75 CDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRI-----------------------------TIPPGISSHLSK  125 (153)
Q Consensus        75 ~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~-----------------------------~~~~~~~~~~~~  125 (153)
                      +|+||+|++++++++|+.||.+.........+......+                             ......+..+.+
T Consensus       213 ~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  292 (364)
T 3qyz_A          213 IDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALD  292 (364)
T ss_dssp             HHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHH
T ss_pred             hhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHH
Confidence            999999999999999999998876665544433210000                             011346789999


Q ss_pred             HHHHHhcCCCCCCCCHHHHHH
Q psy12581        126 LIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus       126 l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      ++.+||+.||++|||+.++++
T Consensus       293 li~~~L~~dP~~R~t~~e~l~  313 (364)
T 3qyz_A          293 LLDKMLTFNPHKRIEVEQALA  313 (364)
T ss_dssp             HHHHHTCSSTTTSCCHHHHHT
T ss_pred             HHHHHcCCChhhCCCHHHHhc
Confidence            999999999999999999985

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=99.94  E-value=1.9e-27  Score=161.79  Aligned_cols=142  Identities=15%  Similarity=0.157  Sum_probs=108.4

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc----------CCcccCCcccCccccccCCCCCCcch
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ----------RGRCYYPAWMSPEALQKKPGDRNLEA   74 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~----------~~~~~~~~~~~pe~~~~~~~~~~~~~   74 (153)
                      ..-++.|||++++.|+||++.||+++.++.+|+.  |||++...          ....|++.|++||.+.+.   .++.+
T Consensus       125 i~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~--Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~  199 (311)
T 3ork_A          125 ACQALNFSHQNGIIHRDVKPANIMISATNAVKVM--DFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGD---SVDAR  199 (311)
T ss_dssp             HHHHHHHHHHTTCCCCCCCGGGEEEETTSCEEEC--CCSCC------------------CCTTCCHHHHHTC---CCCHH
T ss_pred             HHHHHHHHHHCCCCcCCCCHHHEEEcCCCCEEEe--eccCcccccccccccccccccCcCcccCCHHHhcCC---CCCch
Confidence            3457899999999999999999999999998888  99988432          123579999999998764   45589


Q ss_pred             hhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccC--CCCCCCHHHHHHHHHHhcCCCCCCCCHH-HHHHHHhhh
Q psy12581         75 CDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRIT--IPPGISSHLSKLIRICMNEDPGKRPTFD-MVLPILDKM  151 (153)
Q Consensus        75 ~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~cl~~~p~~Rps~~-~~l~~L~~~  151 (153)
                      +|+||+|+++|++++|+.||.+................++  .+...+..+.+++.+||+.||++||+.. ++...|.++
T Consensus       200 ~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~  279 (311)
T 3ork_A          200 SDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRV  279 (311)
T ss_dssp             HHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCCCHHHHSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred             HhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCcccccCCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHH
Confidence            9999999999999999999988776665555444332221  2345789999999999999999999644 445555443

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=99.94  E-value=2.8e-27  Score=163.68  Aligned_cols=140  Identities=20%  Similarity=0.198  Sum_probs=108.4

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc--------CCcccCCcccCccccccCCCCCCcchhh
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ--------RGRCYYPAWMSPEALQKKPGDRNLEACD   76 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~--------~~~~~~~~~~~pe~~~~~~~~~~~~~~d   76 (153)
                      ..-++.|||++++.|+||++.||+++.++.+||.  |||++...        ....||+.|++||.+.+.. ..++.++|
T Consensus       168 i~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kl~--DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~~~D  244 (355)
T 1vzo_A          168 IVLALEHLHKLGIIYRDIKLENILLDSNGHVVLT--DFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGD-SGHDKAVD  244 (355)
T ss_dssp             HHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEES--CSSEEEECCGGGGGGGCGGGSCCTTCCHHHHTTCC----CTHHH
T ss_pred             HHHHHHHHHHCCcccCCCCHHHEEECCCCcEEEe--eCCCCeecccCCCCcccCcccCcCccChhhhcCCC-CCCCchhh
Confidence            4457899999999999999999999999988888  99988432        2246899999999987532 13457899


Q ss_pred             HHHHHHHHHHHHhCCCCCCCCCchhhhHHHHh--hccccCCCCCCCHHHHHHHHHHhcCCCCCCC-----CHHHHHHH
Q psy12581         77 MWSFAVLLWELATREVPFADLTPMEVGMKVAL--EGLRITIPPGISSHLSKLIRICMNEDPGKRP-----TFDMVLPI  147 (153)
Q Consensus        77 v~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----s~~~~l~~  147 (153)
                      +||+|+++|++++|..||...........+..  .....+.+..++..+.+++.+||..||++||     +++++++.
T Consensus       245 vwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h  322 (355)
T 1vzo_A          245 WWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEH  322 (355)
T ss_dssp             HHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTS
T ss_pred             HHHHHHHHHHHHHCCCCCccCCccchHHHHHHHHhccCCCCCcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcC
Confidence            99999999999999999975432222111111  1224456778899999999999999999999     89988753

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=99.94  E-value=4.3e-27  Score=158.25  Aligned_cols=136  Identities=19%  Similarity=0.256  Sum_probs=105.4

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeec---cccchhhccccccccccc------CCcccCCcccCccccccCCCCCCcchh
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQID---EDLTARINMADAQFSFQQ------RGRCYYPAWMSPEALQKKPGDRNLEAC   75 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~---~~~~~kl~~~d~g~~~~~------~~~~~~~~~~~pe~~~~~~~~~~~~~~   75 (153)
                      ..-++.|||++++.|+||.+.||+++   .++.+|+.  |||.+...      ....+++.|++||.+.+    .++.++
T Consensus       133 i~~~L~~LH~~~ivH~dikp~NIl~~~~~~~~~~kl~--Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~----~~~~~~  206 (285)
T 3is5_A          133 MMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKII--DFGLAELFKSDEHSTNAAGTALYMAPEVFKR----DVTFKC  206 (285)
T ss_dssp             HHHHHHHHHHTTCCCCCCSGGGEEESSSSTTCCEEEC--CCCCCCC----------CTTGGGCCHHHHTT----CCCHHH
T ss_pred             HHHHHHHHHhCCEEECCCCHHHEEEecCCCCCCEEEE--eeecceecCCcccCcCcccccCcCChHHhcc----CCCccc
Confidence            34578999999999999999999994   44566666  99998432      33468899999999864    456899


Q ss_pred             hHHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccC-CCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581         76 DMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRIT-IPPGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus        76 dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      |+||+|++++++++|..||.+.................. .....++.+.+++.+||+.||++|||+.++++
T Consensus       207 Di~slG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~  278 (285)
T 3is5_A          207 DIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNYAVECRPLTPQAVDLLKQMLTKDPERRPSAAQVLH  278 (285)
T ss_dssp             HHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCC--CCCCHHHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred             CeehHHHHHHHHHhCCCCCCCCCHHHHHhhhccCCcccccccCcCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            999999999999999999988776655544433322221 22347889999999999999999999999985

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=99.94  E-value=2.2e-28  Score=167.26  Aligned_cols=142  Identities=18%  Similarity=0.189  Sum_probs=106.0

Q ss_pred             hhhHHhhhhcC---CCCCCCeeeeeeeeccccchhhccccccccccc--------CCcccCCcccCccccccCCCCCCcc
Q psy12581          5 KIVYSFYLNSK---KSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ--------RGRCYYPAWMSPEALQKKPGDRNLE   73 (153)
Q Consensus         5 ~~~~~~~lh~~---~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~--------~~~~~~~~~~~pe~~~~~~~~~~~~   73 (153)
                      ..-++.|||++   ++.|+||.+.||+++.++.+||.  |||.+...        ....|++.|++||.+.+.   .++.
T Consensus       140 i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl~--Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~  214 (326)
T 3uim_A          140 SARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVG--DFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTG---KSSE  214 (326)
T ss_dssp             HHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEEC--CCSSCEECCSSSSCEECCCCSCGGGCCHHHHHHS---EECH
T ss_pred             HHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEec--cCccccccCcccccccccccCCcCccCHHHhccC---CCCc
Confidence            34578999999   99999999999999999988888  99998432        223589999999998764   3458


Q ss_pred             hhhHHHHHHHHHHHHhCCCCCCCC----CchhhhHHHHhhc-------------cccCCCCCCCHHHHHHHHHHhcCCCC
Q psy12581         74 ACDMWSFAVLLWELATREVPFADL----TPMEVGMKVALEG-------------LRITIPPGISSHLSKLIRICMNEDPG  136 (153)
Q Consensus        74 ~~dv~s~g~~~~~~~~g~~p~~~~----~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~l~~~cl~~~p~  136 (153)
                      ++|+||+|++++++++|..||...    .............             .....+...+..+.+++.+||+.||+
T Consensus       215 ~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~  294 (326)
T 3uim_A          215 KTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPM  294 (326)
T ss_dssp             HHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTTTTSSCCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGG
T ss_pred             cccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHHHhhchhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCc
Confidence            999999999999999999999521    1111111111110             01111122346789999999999999


Q ss_pred             CCCCHHHHHHHHhhh
Q psy12581        137 KRPTFDMVLPILDKM  151 (153)
Q Consensus       137 ~Rps~~~~l~~L~~~  151 (153)
                      +|||+.++++.|+..
T Consensus       295 ~Rps~~ell~~L~~~  309 (326)
T 3uim_A          295 ERPKMSEVVRMLEGD  309 (326)
T ss_dssp             GSCCHHHHHHHHHTS
T ss_pred             cCCCHHHHHHHhcCc
Confidence            999999999999753

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=99.94  E-value=3.3e-27  Score=161.66  Aligned_cols=137  Identities=20%  Similarity=0.266  Sum_probs=110.1

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeecc---ccchhhccccccccccc------CCcccCCcccCccccccCCCCCCcchh
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDE---DLTARINMADAQFSFQQ------RGRCYYPAWMSPEALQKKPGDRNLEAC   75 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~---~~~~kl~~~d~g~~~~~------~~~~~~~~~~~pe~~~~~~~~~~~~~~   75 (153)
                      ..-++.|||++++.|+||.+.||+++.   ++.+||.  |||++...      ....+++.|++||.+.+.   .++.++
T Consensus       140 l~~~L~~LH~~givH~Dikp~NIl~~~~~~~~~~kL~--Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~  214 (327)
T 3lm5_A          140 ILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIV--DFGMSRKIGHACELREIMGTPEYLAPEILNYD---PITTAT  214 (327)
T ss_dssp             HHHHHHHHHHTTEECSCCCGGGEEESCBTTBCCEEEC--CGGGCEEC---------CCCGGGCCHHHHTTC---CCCTHH
T ss_pred             HHHHHHHHHHCCeecCcCChHHEEEecCCCCCcEEEe--eCccccccCCccccccccCCcCccCCeeecCC---CCCchh
Confidence            345789999999999999999999987   6777777  99998443      234689999999998764   455899


Q ss_pred             hHHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhcc--ccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581         76 DMWSFAVLLWELATREVPFADLTPMEVGMKVALEGL--RITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus        76 dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      |+||+|++++++++|..||.+.........+.....  ........+..+.+++.+||+.||++|||++++++
T Consensus       215 DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~  287 (327)
T 3lm5_A          215 DMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDYSEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLS  287 (327)
T ss_dssp             HHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             hHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHhcccccCchhhcccCHHHHHHHHHHcCCChhhCcCHHHHhC
Confidence            999999999999999999988776665554443322  22234568899999999999999999999999875

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=99.94  E-value=6e-27  Score=158.67  Aligned_cols=137  Identities=20%  Similarity=0.161  Sum_probs=111.7

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc---------CCcccCCcccCccccccCCCCCCcchh
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ---------RGRCYYPAWMSPEALQKKPGDRNLEAC   75 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~---------~~~~~~~~~~~pe~~~~~~~~~~~~~~   75 (153)
                      ..-++.|||++++.|+||.+.||+++.++.+++.  |||.+...         ....+++.|++||.+.+... ..+.++
T Consensus       118 i~~al~~LH~~~i~H~dlkp~NIl~~~~~~~kl~--dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~~~  194 (305)
T 2wtk_C          118 LIDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKIS--ALGVAEALHPFAADDTCRTSQGSPAFQPPEIANGLDT-FSGFKV  194 (305)
T ss_dssp             HHHHHHHHHHTTEECSCCSGGGEEECTTCCEEEC--CCTTCEECCTTCSSCEECCCCSCGGGCCHHHHTCCSC-EESHHH
T ss_pred             HHHHHHHHHHCCeeecCCCcccEEEcCCCcEEee--ccccccccCccccccccccCCCCCCCcChhhccCccc-CCcchh
Confidence            3457899999999999999999999999988888  99988432         23458899999999875322 234789


Q ss_pred             hHHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581         76 DMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus        76 dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      |+||+|++++++++|..||.+.........+...  ....+...+..+.+++.+||..||++|||++++++
T Consensus       195 Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~~~--~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  263 (305)
T 2wtk_C          195 DIWSAGVTLYNITTGLYPFEGDNIYKLFENIGKG--SYAIPGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQ  263 (305)
T ss_dssp             HHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHC--CCCCCSSSCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred             hHHHHHHHHHHHHhCCCCCCCchHHHHHHHHhcC--CCCCCCccCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence            9999999999999999999877655554443332  34456778999999999999999999999999985

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=99.94  E-value=2.4e-27  Score=161.16  Aligned_cols=142  Identities=15%  Similarity=0.120  Sum_probs=108.1

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc--------CCcccCCcccCccccccCCCCCCcchhh
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ--------RGRCYYPAWMSPEALQKKPGDRNLEACD   76 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~--------~~~~~~~~~~~pe~~~~~~~~~~~~~~d   76 (153)
                      ..-++.|||++++.|+||.+.||+++.++.+++.  |||++...        ....+++.|++||.+.+.   .++.++|
T Consensus       143 i~~~l~~lH~~~i~H~dlkp~NIl~~~~~~~kl~--Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~D  217 (309)
T 2h34_A          143 IGSALDAAHAAGATHRDVKPENILVSADDFAYLV--DFGIASATTDEKLTQLGNTVGTLYYMAPERFSES---HATYRAD  217 (309)
T ss_dssp             HHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEEC--SCCC----------------CCGGGCCGGGTCC-------CCCH
T ss_pred             HHHHHHHHHHCcCCcCCCChHHEEEcCCCCEEEe--cCccCccccccccccccccCCCcCccCHHHHcCC---CCCchHh
Confidence            3457899999999999999999999999988888  99987332        234678899999998754   3457899


Q ss_pred             HHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhcc--ccCCCCCCCHHHHHHHHHHhcCCCCCCC-CHHHHHHHHhhhh
Q psy12581         77 MWSFAVLLWELATREVPFADLTPMEVGMKVALEGL--RITIPPGISSHLSKLIRICMNEDPGKRP-TFDMVLPILDKMK  152 (153)
Q Consensus        77 v~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-s~~~~l~~L~~~~  152 (153)
                      +||+|++++++++|..||.+....... .......  ....+...+..+.+++.+||..||++|| +++++++.|+++.
T Consensus       218 i~slG~il~~l~~g~~pf~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l  295 (309)
T 2h34_A          218 IYALTCVLYECLTGSPPYQGDQLSVMG-AHINQAIPRPSTVRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAAL  295 (309)
T ss_dssp             HHHHHHHHHHHHHSSCSSCSCHHHHHH-HHHHSCCCCGGGTSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHHHHCCCCCCCchHHHHH-HHhccCCCCccccCCCCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHH
Confidence            999999999999999999876544322 2222221  1234566888999999999999999999 8999999998763

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=99.94  E-value=8.8e-27  Score=159.17  Aligned_cols=137  Identities=15%  Similarity=0.099  Sum_probs=109.8

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc------CCcccCCcccCccccccCCCCCCcchhhHH
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ------RGRCYYPAWMSPEALQKKPGDRNLEACDMW   78 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~------~~~~~~~~~~~pe~~~~~~~~~~~~~~dv~   78 (153)
                      ..-++.|||++++.|+||.+.||+++.++.+|+.  |||.+...      ....+++.|++||.+.+.   .++.++|+|
T Consensus       129 i~~~l~~lH~~gi~H~dlkp~Nili~~~~~~kl~--Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~  203 (326)
T 1blx_A          129 LLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLA--DFGLARIYSFQMALTSVVVTLWYRAPEVLLQS---SYATPVDLW  203 (326)
T ss_dssp             HHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEEC--SCCSCCCCCGGGGGCCCCCCCTTCCHHHHTTC---CCCTHHHHH
T ss_pred             HHHHHHHHHHCCceeccCCHHHeEEcCCCCEEEe--cCcccccccCCCCccccccccceeCHHHHhcC---CCCcchhHH
Confidence            3457899999999999999999999999988888  99988432      345678999999998764   355899999


Q ss_pred             HHHHHHHHHHhCCCCCCCCCchhhhHHHHhhcc-------------------------ccCCCCCCCHHHHHHHHHHhcC
Q psy12581         79 SFAVLLWELATREVPFADLTPMEVGMKVALEGL-------------------------RITIPPGISSHLSKLIRICMNE  133 (153)
Q Consensus        79 s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~~~~~l~~~cl~~  133 (153)
                      |+|++++++++|..||.+.........+.....                         ........+..+.+++.+||..
T Consensus       204 slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  283 (326)
T 1blx_A          204 SVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTF  283 (326)
T ss_dssp             HHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCS
T ss_pred             HHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCcccCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCC
Confidence            999999999999999988776555444432100                         0012345788999999999999


Q ss_pred             CCCCCCCHHHHHH
Q psy12581        134 DPGKRPTFDMVLP  146 (153)
Q Consensus       134 ~p~~Rps~~~~l~  146 (153)
                      ||++|||+.++++
T Consensus       284 dP~~Rpt~~e~l~  296 (326)
T 1blx_A          284 NPAKRISAYSALS  296 (326)
T ss_dssp             STTTSCCHHHHHT
T ss_pred             CcccCCCHHHHhc
Confidence            9999999999984

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=99.94  E-value=3.6e-27  Score=162.91  Aligned_cols=136  Identities=18%  Similarity=0.260  Sum_probs=105.8

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccc---hhhccccccccccc-------CCcccCCcccCccccccCCCCCCcch
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLT---ARINMADAQFSFQQ-------RGRCYYPAWMSPEALQKKPGDRNLEA   74 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~---~kl~~~d~g~~~~~-------~~~~~~~~~~~pe~~~~~~~~~~~~~   74 (153)
                      ..-++.|||++++.|+||++.||+++.++.   +|+.  |||++...       ....||+.|++||.+.+.   .++.+
T Consensus       139 i~~al~~lH~~~ivHrDlkp~NIl~~~~~~~~~vkl~--Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~  213 (351)
T 3c0i_A          139 ILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLG--GFGVAIQLGESGLVAGGRVGTPHFMAPEVVKRE---PYGKP  213 (351)
T ss_dssp             HHHHHHHHHHTTEECSCCSGGGEEECSSSTTCCEEEC--CCTTCEECCTTSCBCCCCCSCGGGCCHHHHTTC---CBCTH
T ss_pred             HHHHHHHHHHCCceeccCChHHeEEecCCCCCcEEEe--cCcceeEecCCCeeecCCcCCcCccCHHHHcCC---CCCch
Confidence            345789999999999999999999987654   5666  99998432       234789999999998764   34589


Q ss_pred             hhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccC--CCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581         75 CDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRIT--IPPGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus        75 ~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      +|+||+|+++|++++|..||.+.. ......+........  .....+..+.+++.+||+.||++|||+.++++
T Consensus       214 ~DiwslG~il~~ll~g~~pf~~~~-~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~  286 (351)
T 3c0i_A          214 VDVWGCGVILFILLSGCLPFYGTK-ERLFEGIIKGKYKMNPRQWSHISESAKDLVRRMLMLDPAERITVYEALN  286 (351)
T ss_dssp             HHHHHHHHHHHHHHHSSCSSCSSH-HHHHHHHHHTCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             HhhHHHHHHHHHHHHCCCCCCCcH-HHHHHHHHcCCCCCCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence            999999999999999999997743 233333333222211  12457899999999999999999999999974

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=99.94  E-value=4.5e-27  Score=164.09  Aligned_cols=138  Identities=14%  Similarity=0.099  Sum_probs=109.6

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeec-cccchhhccccccccccc------CCcccCCcccCccccccCCCCCCcchhhH
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQID-EDLTARINMADAQFSFQQ------RGRCYYPAWMSPEALQKKPGDRNLEACDM   77 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~-~~~~~kl~~~d~g~~~~~------~~~~~~~~~~~pe~~~~~~~~~~~~~~dv   77 (153)
                      ..-++.|||++++.|+||++.||+++ .++.+|+.  |||.+...      ....+++.|+|||.+.+..  .++.++|+
T Consensus       150 i~~aL~~LH~~gi~H~Dikp~Nil~~~~~~~~kl~--Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~--~~~~~~Di  225 (383)
T 3eb0_A          150 LFRAVGFIHSLGICHRDIKPQNLLVNSKDNTLKLC--DFGSAKKLIPSEPSVAYICSRFYRAPELMLGAT--EYTPSIDL  225 (383)
T ss_dssp             HHHHHHHHHTTTEECSCCCGGGEEEETTTTEEEEC--CCTTCEECCTTSCCCCCCCCSSCCCHHHHTTCS--SCCTHHHH
T ss_pred             HHHHHHHHHHCcCccCccCHHHEEEcCCCCcEEEE--ECCCCcccCCCCCCcCcccCCCccCHHHhcCCC--CCCcchhh
Confidence            34578999999999999999999997 67888888  99998432      2346788999999987532  35689999


Q ss_pred             HHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccc---------------------------cCCCCCCCHHHHHHHHHH
Q psy12581         78 WSFAVLLWELATREVPFADLTPMEVGMKVALEGLR---------------------------ITIPPGISSHLSKLIRIC  130 (153)
Q Consensus        78 ~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~~~~~l~~~c  130 (153)
                      ||+|++++++++|+.||.+.........+......                           ...+...+..+.+++.+|
T Consensus       226 wslG~il~ell~g~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  305 (383)
T 3eb0_A          226 WSIGCVFGELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQI  305 (383)
T ss_dssp             HHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHH
T ss_pred             hhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHH
Confidence            99999999999999999887766655544321100                           013445788999999999


Q ss_pred             hcCCCCCCCCHHHHHH
Q psy12581        131 MNEDPGKRPTFDMVLP  146 (153)
Q Consensus       131 l~~~p~~Rps~~~~l~  146 (153)
                      |+.||++|||+.++++
T Consensus       306 L~~dP~~R~t~~e~l~  321 (383)
T 3eb0_A          306 LRYEPDLRINPYEAMA  321 (383)
T ss_dssp             CCSSGGGSCCHHHHHT
T ss_pred             ccCChhhCCCHHHHhc
Confidence            9999999999999974

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=99.94  E-value=6.6e-28  Score=169.81  Aligned_cols=133  Identities=10%  Similarity=0.017  Sum_probs=105.5

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc----CCcccCCcccCccccccC-------CCCCCcc
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ----RGRCYYPAWMSPEALQKK-------PGDRNLE   73 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~----~~~~~~~~~~~pe~~~~~-------~~~~~~~   73 (153)
                      ..-++.|||+++|.|+||++.||+++.++.+||.  |||++...    ...+| +.|++||.+...       ....++.
T Consensus       220 i~~aL~~LH~~~iiHrDiKp~NILl~~~~~~kL~--DFG~a~~~~~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~  296 (413)
T 3dzo_A          220 VIRLLASLHHYGLVHTYLRPVDIVLDQRGGVFLT--GFEHLVRDGASAVSPIG-RGFAPPETTAERMLPFGQHHPTLMTF  296 (413)
T ss_dssp             HHHHHHHHHHTTEECSCCCGGGEEECTTCCEEEC--CGGGCEETTEEECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECH
T ss_pred             HHHHHHHHHhCCcccCCcccceEEEecCCeEEEE--eccceeecCCccccCCC-CceeCchhhhccccccccccCcCCCc
Confidence            4557899999999999999999999999998888  99997433    34467 999999998321       1123557


Q ss_pred             hhhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581         74 ACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus        74 ~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      ++|+||+|+++|++++|+.||...........+.      ......+..+.+++.+||+.||++||++.++++
T Consensus       297 ~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~------~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~~l~  363 (413)
T 3dzo_A          297 AFDTWTLGLAIYWIWCADLPNTDDAALGGSEWIF------RSCKNIPQPVRALLEGFLRYPKEDRLLPLQAME  363 (413)
T ss_dssp             HHHHHHHHHHHHHHHHSSCCCCTTGGGSCSGGGG------SSCCCCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             hhhHHHHHHHHHHHHHCCCCCCCcchhhhHHHHH------hhcccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence            9999999999999999999997765444332222      123357899999999999999999999887754

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=99.94  E-value=2.6e-27  Score=164.49  Aligned_cols=138  Identities=17%  Similarity=0.114  Sum_probs=101.9

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc----CCcccCCcccCccccccCCCCCCcchhhHHHH
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ----RGRCYYPAWMSPEALQKKPGDRNLEACDMWSF   80 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~----~~~~~~~~~~~pe~~~~~~~~~~~~~~dv~s~   80 (153)
                      ..-++.|||++++.|+||++.||+++.++.+||.  |||++...    ....+|+.|++||.+.+.  ..++.++|+||+
T Consensus       141 i~~aL~~LH~~givH~Dlkp~NIll~~~~~~kL~--DFG~a~~~~~~~~~~~~t~~y~aPE~~~~~--~~~~~~~Diwsl  216 (367)
T 2fst_X          141 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKIL--DFGLARHTADEMTGYVATRWYRAPEIMLNW--MHYNQTVDIWSV  216 (367)
T ss_dssp             HHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEEC--C---------------CCCTTCCHHHHTTC--CSCCTTHHHHHH
T ss_pred             HHHHHHHHHHCCeeeCCCCHhhEEECCCCCEEEe--eccccccccccCCCcCcCcCccChHHHcCC--cCCCchhhHHHH
Confidence            3457899999999999999999999999988888  99998443    334789999999998752  235588999999


Q ss_pred             HHHHHHHHhCCCCCCCCCchhhhHHHHhhccc---------------------cC--------CCCCCCHHHHHHHHHHh
Q psy12581         81 AVLLWELATREVPFADLTPMEVGMKVALEGLR---------------------IT--------IPPGISSHLSKLIRICM  131 (153)
Q Consensus        81 g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~---------------------~~--------~~~~~~~~~~~l~~~cl  131 (153)
                      |++++++++|+.||.+.........+......                     ..        .....++.+.+++.+||
T Consensus       217 G~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL  296 (367)
T 2fst_X          217 GCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKML  296 (367)
T ss_dssp             HHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHTTCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHS
T ss_pred             HHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhC
Confidence            99999999999999887665544433221000                     00        01245788999999999


Q ss_pred             cCCCCCCCCHHHHHH
Q psy12581        132 NEDPGKRPTFDMVLP  146 (153)
Q Consensus       132 ~~~p~~Rps~~~~l~  146 (153)
                      +.||++|||+.++++
T Consensus       297 ~~dP~~R~t~~e~L~  311 (367)
T 2fst_X          297 VLDSDKRITAAQALA  311 (367)
T ss_dssp             CSSGGGSCCHHHHHT
T ss_pred             CCCcccCcCHHHHhc
Confidence            999999999999975

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=99.94  E-value=4.9e-27  Score=162.09  Aligned_cols=138  Identities=17%  Similarity=0.116  Sum_probs=107.0

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc-----------CCcccCCcccCccccccCCCCCCcc
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ-----------RGRCYYPAWMSPEALQKKPGDRNLE   73 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~-----------~~~~~~~~~~~pe~~~~~~~~~~~~   73 (153)
                      ..-++.|||++++.|+||++.||+++.++.+||.  |||++...           ....+|+.|+|||.+.+.  ..++.
T Consensus       133 i~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~kl~--Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~  208 (351)
T 3mi9_A          133 LLNGLYYIHRNKILHRDMKAANVLITRDGVLKLA--DFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGE--RDYGP  208 (351)
T ss_dssp             HHHHHHHHHHTTEECCCCSGGGEEECTTSCEEEC--CCTTCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTC--CSCCT
T ss_pred             HHHHHHHHHHCCeeCCCCCHHHEEEcCCCCEEEc--cchhcccccccccccccccCCcccccCccCchhhcCC--CCCCc
Confidence            3457899999999999999999999999988888  99987432           233678899999998653  23458


Q ss_pred             hhhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhcccc--CCCCC----------------------------CCHHH
Q psy12581         74 ACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRI--TIPPG----------------------------ISSHL  123 (153)
Q Consensus        74 ~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~--~~~~~----------------------------~~~~~  123 (153)
                      ++|+||+|++++++++|..||.+.........+.......  .....                            .++.+
T Consensus       209 ~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  288 (351)
T 3mi9_A          209 PIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYA  288 (351)
T ss_dssp             HHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHH
T ss_pred             HhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhhccccccchhhcccccccccccCHHHHhhhccCChHH
Confidence            9999999999999999999998877665544433211111  10000                            15678


Q ss_pred             HHHHHHHhcCCCCCCCCHHHHHH
Q psy12581        124 SKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus       124 ~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      .+++.+||+.||++|||++++++
T Consensus       289 ~~li~~~L~~dP~~R~t~~e~l~  311 (351)
T 3mi9_A          289 LDLIDKLLVLDPAQRIDSDDALN  311 (351)
T ss_dssp             HHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             HHHHHHHhcCChhhCCCHHHHhC
Confidence            99999999999999999999885

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=99.94  E-value=2.2e-27  Score=159.04  Aligned_cols=139  Identities=22%  Similarity=0.257  Sum_probs=112.9

Q ss_pred             hhhHHhhhhcCC-----CCCCCeeeeeeeeccccchhhcccccccccccC-------CcccCCcccCccccccCCCCCCc
Q psy12581          5 KIVYSFYLNSKK-----SKTSNAFLFCCQIDEDLTARINMADAQFSFQQR-------GRCYYPAWMSPEALQKKPGDRNL   72 (153)
Q Consensus         5 ~~~~~~~lh~~~-----i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~-------~~~~~~~~~~pe~~~~~~~~~~~   72 (153)
                      ..-++.|||+++     +.|+||.+.||+++.++.+|+.  |||.+....       ...+++.|++||.+.+.   .++
T Consensus       120 i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~--dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~  194 (279)
T 2w5a_A          120 LTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLG--DFGLARILNHDTSFAKTFVGTPYYMSPEQMNRM---SYN  194 (279)
T ss_dssp             HHHHHHHHHHHC------CCCCCSGGGEEECSSSCEEEC--CCCHHHHC---CHHHHHHHSCCTTCCHHHHHCC----CC
T ss_pred             HHHHHHHHhcccCCCCeeEEeccchhhEEEcCCCCEEEe--cCchheeeccccccccccCCCccccChHHhccC---CCC
Confidence            455789999998     9999999999999999988888  999984332       23678999999998764   355


Q ss_pred             chhhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHh
Q psy12581         73 EACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILD  149 (153)
Q Consensus        73 ~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~  149 (153)
                      .++|+||+|++++++++|..||...........+. .+.....+...+..+.+++.+||+.||++|||++++++.+.
T Consensus       195 ~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~-~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~  270 (279)
T 2w5a_A          195 EKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIR-EGKFRRIPYRYSDELNEIITRMLNLKDYHRPSVEEILENPL  270 (279)
T ss_dssp             HHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHH-HTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTT
T ss_pred             chhhHHHHHHHHHHHHHCCCCCcccCHHHHHHHHh-hcccccCCcccCHHHHHHHHHHcCCCcccCCCHHHHHhChh
Confidence            89999999999999999999998876555444433 34344567788999999999999999999999999987653

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=99.94  E-value=9.5e-28  Score=168.78  Aligned_cols=139  Identities=16%  Similarity=0.149  Sum_probs=110.2

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc--------CCcccCCcccCccccccCC----CCCCc
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ--------RGRCYYPAWMSPEALQKKP----GDRNL   72 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~--------~~~~~~~~~~~pe~~~~~~----~~~~~   72 (153)
                      ...++.|||+++|.|+||++.||+++.+|.+||.  |||++...        ...+||+.|+|||.+....    ...++
T Consensus       171 i~~aL~~LH~~giiHrDLKp~NILld~~g~vkL~--DFGla~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~  248 (412)
T 2vd5_A          171 IVMAIDSVHRLGYVHRDIKPDNILLDRCGHIRLA--DFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYG  248 (412)
T ss_dssp             HHHHHHHHHHTTEECCCCSGGGEEECTTSCEEEC--CCTTCEECCTTSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEEC
T ss_pred             HHHHHHHHHHCCeeecccCHHHeeecCCCCEEEe--echhheeccCCCccccceeccccCcCCHHHHhhcccCcCCCCCC
Confidence            4567899999999999999999999999999988  99998432        2347899999999986311    12356


Q ss_pred             chhhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccC---CCCCCCHHHHHHHHHHhcCCCCCC---CCHHHHHH
Q psy12581         73 EACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRIT---IPPGISSHLSKLIRICMNEDPGKR---PTFDMVLP  146 (153)
Q Consensus        73 ~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~~cl~~~p~~R---ps~~~~l~  146 (153)
                      .++|+||+|+++||+++|..||.+........++........   .+..++.++.+++.+||. +|.+|   ++++++++
T Consensus       249 ~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~  327 (412)
T 2vd5_A          249 PECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYKEHLSLPLVDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRT  327 (412)
T ss_dssp             THHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCCCC----CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHT
T ss_pred             hHHhhhHHhHHHHHHHhCCCCCCCCCHHHHHHHHHhcccCcCCCccccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhc
Confidence            899999999999999999999998877776666654322222   235789999999999999 99998   58888864

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=99.94  E-value=5.9e-27  Score=160.54  Aligned_cols=138  Identities=14%  Similarity=0.072  Sum_probs=103.4

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeecc-----ccchhhccccccccccc-------CCcccCCcccCccccccCCCCCCc
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDE-----DLTARINMADAQFSFQQ-------RGRCYYPAWMSPEALQKKPGDRNL   72 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~-----~~~~kl~~~d~g~~~~~-------~~~~~~~~~~~pe~~~~~~~~~~~   72 (153)
                      ..-++.|||++++.|+||++.||+++.     ++.+||.  |||.+...       ....+++.|++||.+.+..  .++
T Consensus       141 l~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~kl~--Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~--~~~  216 (329)
T 3gbz_A          141 LINGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIG--DFGLARAFGIPIRQFTHEIITLWYRPPEILLGSR--HYS  216 (329)
T ss_dssp             HHHHHHHHHHTTCCCSCCCGGGEEEEC-----CCEEEEC--CTTHHHHHC-----------CCTTCCHHHHTTCC--CCC
T ss_pred             HHHHHHHHHhCCEECCCCCHHHEEEecCCCCccceEEEC--cCCCccccCCcccccCCCcCCccccCHHHhcCCC--CCC
Confidence            345789999999999999999999954     3446776  99998432       2346789999999987532  356


Q ss_pred             chhhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccC----------------C------------CCCCCHHHH
Q psy12581         73 EACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRIT----------------I------------PPGISSHLS  124 (153)
Q Consensus        73 ~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~----------------~------------~~~~~~~~~  124 (153)
                      .++|+||+|++++++++|..||.+.........+......+.                .            +...+..+.
T Consensus       217 ~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  296 (329)
T 3gbz_A          217 TSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGL  296 (329)
T ss_dssp             THHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHH
T ss_pred             cHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHHHHHHHhCCCchhhhhhhhhhhhhhhhhhhhccccHhhhcccccCHHHH
Confidence            899999999999999999999988776665554433211110                0            011568899


Q ss_pred             HHHHHHhcCCCCCCCCHHHHHH
Q psy12581        125 KLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus       125 ~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      +++.+||+.||++|||++++++
T Consensus       297 ~li~~~L~~dP~~R~t~~e~l~  318 (329)
T 3gbz_A          297 DLLTAMLEMDPVKRISAKNALE  318 (329)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHT
T ss_pred             HHHHHHccCChhhCCCHHHHhC
Confidence            9999999999999999999986

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=99.94  E-value=7.9e-28  Score=164.61  Aligned_cols=143  Identities=20%  Similarity=0.270  Sum_probs=112.7

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc----------CCcccCCcccCccccccCCCCCCcch
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ----------RGRCYYPAWMSPEALQKKPGDRNLEA   74 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~----------~~~~~~~~~~~pe~~~~~~~~~~~~~   74 (153)
                      ..-++.|||++++.|+||.+.||+++.++.+|+.  |||++...          ....++..|++||.+.+.   .++.+
T Consensus       154 i~~aL~~LH~~~ivH~dikp~NIli~~~~~~kL~--Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~  228 (326)
T 2w1i_A          154 ICKGMEYLGTKRYIHRDLATRNILVENENRVKIG--DFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTES---KFSVA  228 (326)
T ss_dssp             HHHHHHHHHHTTEECSCCCGGGEEEEETTEEEEC--CCTTCEECCSSCSEEECSSCCSCCGGGCCHHHHHHC---EEEHH
T ss_pred             HHHHHHHHHhCCEeccCCCcceEEEcCCCcEEEe--cCcchhhccccccccccccCCCCceeEECchhhcCC---CCCch
Confidence            3457899999999999999999999999988888  99998432          123456679999998764   34589


Q ss_pred             hhHHHHHHHHHHHHhCCCCCCCCCch-----------h----hhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCC
Q psy12581         75 CDMWSFAVLLWELATREVPFADLTPM-----------E----VGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRP  139 (153)
Q Consensus        75 ~dv~s~g~~~~~~~~g~~p~~~~~~~-----------~----~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp  139 (153)
                      +|+||+|++++++++|..|+......           .    .....+......+.+..++..+.+++.+||..||++||
T Consensus       229 ~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp  308 (326)
T 2w1i_A          229 SDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRP  308 (326)
T ss_dssp             HHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSC
T ss_pred             hhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHHHHHHhhcCCCCCCCCcccHHHHHHHHHHcCCChhhCc
Confidence            99999999999999998887532100           0    11122333445556778899999999999999999999


Q ss_pred             CHHHHHHHHhhhh
Q psy12581        140 TFDMVLPILDKMK  152 (153)
Q Consensus       140 s~~~~l~~L~~~~  152 (153)
                      |+.++++.|++++
T Consensus       309 s~~el~~~L~~l~  321 (326)
T 2w1i_A          309 SFRDLALRVDQIR  321 (326)
T ss_dssp             CHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHH
Confidence            9999999999875

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=99.94  E-value=6.2e-27  Score=162.78  Aligned_cols=138  Identities=17%  Similarity=0.141  Sum_probs=107.8

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc----CCcccCCcccCccccccCCCCCCcchhhHHHH
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ----RGRCYYPAWMSPEALQKKPGDRNLEACDMWSF   80 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~----~~~~~~~~~~~pe~~~~~~~~~~~~~~dv~s~   80 (153)
                      ..-++.|||++++.|+||++.||+++.++.+||.  |||.+...    ....+++.|++||.+.+.  ..++.++|+||+
T Consensus       153 i~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kL~--Dfg~a~~~~~~~~~~~~t~~y~aPE~~~~~--~~~~~~~Diwsl  228 (371)
T 4exu_A          153 MLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKIL--DFGLARHADAEMTGYVVTRWYRAPEVILSW--MHYNQTVDIWSV  228 (371)
T ss_dssp             HHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEEC--STTCC--------CTTCCCTTSCHHHHSCC--SCCCTTHHHHHH
T ss_pred             HHHHHHHHHHCCCcCCCcCHHHeEECCCCCEEEE--ecCcccccccCcCCcccCccccCHHHhcCC--CCCCcHHhHHHH
Confidence            4457899999999999999999999999998888  99998433    334788999999998752  235588999999


Q ss_pred             HHHHHHHHhCCCCCCCCCchhhhHHHHhhccc-----------------------c------CCCCCCCHHHHHHHHHHh
Q psy12581         81 AVLLWELATREVPFADLTPMEVGMKVALEGLR-----------------------I------TIPPGISSHLSKLIRICM  131 (153)
Q Consensus        81 g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~-----------------------~------~~~~~~~~~~~~l~~~cl  131 (153)
                      |++++++++|..||.+.........+......                       .      ..+...++.+.+++.+||
T Consensus       229 G~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L  308 (371)
T 4exu_A          229 GCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKML  308 (371)
T ss_dssp             HHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHS
T ss_pred             HHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCcHHHHHHhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHC
Confidence            99999999999999887655544433221000                       0      012346889999999999


Q ss_pred             cCCCCCCCCHHHHHH
Q psy12581        132 NEDPGKRPTFDMVLP  146 (153)
Q Consensus       132 ~~~p~~Rps~~~~l~  146 (153)
                      +.||++|||+.++++
T Consensus       309 ~~dP~~Rpt~~ell~  323 (371)
T 4exu_A          309 ELDVDKRLTAAQALT  323 (371)
T ss_dssp             CSCTTTSCCHHHHHT
T ss_pred             CCChhhcCCHHHHhc
Confidence            999999999999975

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=99.94  E-value=5e-27  Score=159.06  Aligned_cols=137  Identities=25%  Similarity=0.348  Sum_probs=112.4

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc-------CCcccCCcccCccccccCCCCCCcchhhH
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ-------RGRCYYPAWMSPEALQKKPGDRNLEACDM   77 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~-------~~~~~~~~~~~pe~~~~~~~~~~~~~~dv   77 (153)
                      ..-++.|||++++.|+||.+.||+++.++.+++.  |||.+...       ....+++.|++||.+.+.   .++.++|+
T Consensus       128 i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~--Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di  202 (303)
T 3a7i_A          128 ILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLA--DFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQS---AYDSKADI  202 (303)
T ss_dssp             HHHHHHHHHHTTEECCCCSGGGEEECTTSCEEEC--CCTTCEECBTTBCCBCCCCSCGGGCCHHHHTTC---CBCTHHHH
T ss_pred             HHHHHHHHHHCCCccCCCChheEEECCCCCEEEe--ecccceecCccccccCccCCCcCccCHHHHhcC---CCCchhhh
Confidence            3457889999999999999999999999988888  99988432       234678899999998764   34579999


Q ss_pred             HHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHH
Q psy12581         78 WSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPI  147 (153)
Q Consensus        78 ~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~  147 (153)
                      ||+|++++++++|..||...........+ ........+...+..+.+++.+||..+|++|||+.++++.
T Consensus       203 ~slG~il~~l~~g~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~  271 (303)
T 3a7i_A          203 WSLGITAIELARGEPPHSELHPMKVLFLI-PKNNPPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKH  271 (303)
T ss_dssp             HHHHHHHHHHHHSSCTTTTSCHHHHHHHH-HHSCCCCCCSSCCHHHHHHHHHHCCSSGGGSCCHHHHTTC
T ss_pred             HHHHHHHHHHccCCCCCCCcCHHHHHHHh-hcCCCCCCccccCHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence            99999999999999999877655544333 2333445566789999999999999999999999999753

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=99.94  E-value=2.1e-27  Score=158.98  Aligned_cols=136  Identities=21%  Similarity=0.225  Sum_probs=109.2

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeee---ccccchhhccccccccccc------CCcccCCcccCccccccCCCCCCcchh
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQI---DEDLTARINMADAQFSFQQ------RGRCYYPAWMSPEALQKKPGDRNLEAC   75 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~---~~~~~~kl~~~d~g~~~~~------~~~~~~~~~~~pe~~~~~~~~~~~~~~   75 (153)
                      ..-++.|||++++.|+||.+.||++   +.++.+++.  |||.+...      ....+++.|++||.+.+    .++.++
T Consensus       115 i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~~l~--Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~----~~~~~~  188 (277)
T 3f3z_A          115 VLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLI--DFGLAARFKPGKMMRTKVGTPYYVSPQVLEG----LYGPEC  188 (277)
T ss_dssp             HHHHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEEC--CCTTCEECCTTSCBCCCCSCTTTCCHHHHTT----CBCTTH
T ss_pred             HHHHHHHHHHCCccCCCCCHHHEEEecCCCCCcEEEE--ecccceeccCccchhccCCCCCccChHHhcc----cCCchh
Confidence            3457899999999999999999999   777777777  99988432      34478899999999865    356889


Q ss_pred             hHHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCC--CCCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581         76 DMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITI--PPGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus        76 dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      |+||+|++++++++|..||...........+.......+.  ....++.+.+++.+||+.||++|||+.++++
T Consensus       189 Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~  261 (277)
T 3f3z_A          189 DEWSAGVMMYVLLCGYPPFSAPTDSEVMLKIREGTFTFPEKDWLNVSPQAESLIRRLLTKSPKQRITSLQALE  261 (277)
T ss_dssp             HHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred             hehhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCchhhhcCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            9999999999999999999887766655554433222211  1257899999999999999999999999974

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=99.94  E-value=1.3e-26  Score=160.19  Aligned_cols=138  Identities=17%  Similarity=0.159  Sum_probs=107.1

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc----CCcccCCcccCccccccCCCCCCcchhhHHHH
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ----RGRCYYPAWMSPEALQKKPGDRNLEACDMWSF   80 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~----~~~~~~~~~~~pe~~~~~~~~~~~~~~dv~s~   80 (153)
                      ..-++.|||++++.|+||.+.||+++.++.+|+.  |||.+...    ....+++.|++||.+.+.  ..++.++|+||+
T Consensus       135 i~~al~~LH~~~ivH~dlkp~NIl~~~~~~~kl~--Dfg~~~~~~~~~~~~~~t~~y~aPE~~~~~--~~~~~~~Di~sl  210 (353)
T 3coi_A          135 MLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKIL--DFGLARHADAEMTGYVVTRWYRAPEVILSW--MHYNQTVDIWSV  210 (353)
T ss_dssp             HHHHHHHHHHTTCCCSSCCGGGEEECTTCCEEEC--STTCTTC--------CCSBCCSCHHHHSCC--SCCCTTHHHHHH
T ss_pred             HHHHHHHHHHCCcccCCCCHHHEeECCCCcEEEe--ecccccCCCCCccccccCcCcCCHHHHhCc--CCCCchhhHHHH
Confidence            3457899999999999999999999999988888  99998433    234678999999998752  234578999999


Q ss_pred             HHHHHHHHhCCCCCCCCCchhhhHHHHhhc----------------------c-------ccCCCCCCCHHHHHHHHHHh
Q psy12581         81 AVLLWELATREVPFADLTPMEVGMKVALEG----------------------L-------RITIPPGISSHLSKLIRICM  131 (153)
Q Consensus        81 g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~----------------------~-------~~~~~~~~~~~~~~l~~~cl  131 (153)
                      |++++++++|..||.+.........+....                      .       ........+..+.+++.+||
T Consensus       211 G~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L  290 (353)
T 3coi_A          211 GCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKML  290 (353)
T ss_dssp             HHHHHHHHHSSCSSBSSCHHHHHHHHHHHHCBCCHHHHTTCSCHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHS
T ss_pred             HHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHHhhHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHc
Confidence            999999999999998766544433322110                      0       01122456889999999999


Q ss_pred             cCCCCCCCCHHHHHH
Q psy12581        132 NEDPGKRPTFDMVLP  146 (153)
Q Consensus       132 ~~~p~~Rps~~~~l~  146 (153)
                      +.||++|||+.++++
T Consensus       291 ~~dp~~Rpt~~e~l~  305 (353)
T 3coi_A          291 ELDVDKRLTAAQALT  305 (353)
T ss_dssp             CSCTTTSCCHHHHHT
T ss_pred             CCCcccCCCHHHHhc
Confidence            999999999999975

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=99.94  E-value=4.1e-27  Score=160.73  Aligned_cols=137  Identities=18%  Similarity=0.173  Sum_probs=109.3

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeecccc----chhhccccccccccc------CCcccCCcccCccccccCCCCCCcch
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDL----TARINMADAQFSFQQ------RGRCYYPAWMSPEALQKKPGDRNLEA   74 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~----~~kl~~~d~g~~~~~------~~~~~~~~~~~pe~~~~~~~~~~~~~   74 (153)
                      ..-++.|||++++.|+||.+.||+++.++    .+++.  |||.+...      ....+++.|++||.+.+.   .++.+
T Consensus       124 i~~aL~~lH~~~ivH~dikp~NIl~~~~~~~~~~~kl~--Dfg~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~  198 (321)
T 2a2a_A          124 ILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLI--DFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYE---PLGLE  198 (321)
T ss_dssp             HHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEEC--CCTTCEECCTTCCCCCCCSCGGGCCHHHHTTC---CCCTH
T ss_pred             HHHHHHHHHhCCeecCCCChHHEEEecCCCCcCCEEEc--cCccceecCccccccccCCCCCccCcccccCC---CCCCc
Confidence            45578999999999999999999999887    46666  99998432      234688999999998764   34589


Q ss_pred             hhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhcccc--CCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581         75 CDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRI--TIPPGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus        75 ~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      +|+||+|++++++++|..||.+.........+.......  ..+...+..+.+++.+||+.||++|||+.++++
T Consensus       199 ~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~  272 (321)
T 2a2a_A          199 ADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALR  272 (321)
T ss_dssp             HHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCHHHHTTCCHHHHHHHHTTSCSSTTTSCCHHHHHH
T ss_pred             cccHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccccChhhhcccCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence            999999999999999999998876665554443322211  112467889999999999999999999999986

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=99.94  E-value=1.9e-27  Score=165.34  Aligned_cols=137  Identities=18%  Similarity=0.131  Sum_probs=101.3

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc------CCcccCCcccCccccccCCCCCCcchhhHH
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ------RGRCYYPAWMSPEALQKKPGDRNLEACDMW   78 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~------~~~~~~~~~~~pe~~~~~~~~~~~~~~dv~   78 (153)
                      ..-++.|||++++.|+||++.||+++.++.+||.  |||++...      ....+++.|+|||.+.+.   .++.++|+|
T Consensus       136 i~~al~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~--Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~Diw  210 (371)
T 2xrw_A          136 MLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKIL--DFGLARTAGTSFMMTPYVVTRYYRAPEVILGM---GYKENVDIW  210 (371)
T ss_dssp             HHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEEC--CCCC----------------CTTCCHHHHTTC---CCCTTHHHH
T ss_pred             HHHHHHHHHHCCeecccCCHHHEEEcCCCCEEEE--EeecccccccccccCCceecCCccCHHHhcCC---CCCchHhHH
Confidence            3457899999999999999999999999988888  99998433      234788999999999864   355899999


Q ss_pred             HHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccc--------------------cC--------------CCCC------
Q psy12581         79 SFAVLLWELATREVPFADLTPMEVGMKVALEGLR--------------------IT--------------IPPG------  118 (153)
Q Consensus        79 s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~--------------------~~--------------~~~~------  118 (153)
                      |+|++++++++|..||.+.........+......                    +.              .|..      
T Consensus       211 slG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  290 (371)
T 2xrw_A          211 SVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKL  290 (371)
T ss_dssp             HHHHHHHHHHHSSCSSCCSSHHHHHHHHHC-CCCCCHHHHTTSCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHH
T ss_pred             HHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHHHHHHhhCccccccchhhhcccccCccccccccc
Confidence            9999999999999999887665544443321100                    00              0000      


Q ss_pred             CCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581        119 ISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus       119 ~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      .+..+.+++.+||+.||++|||++++++
T Consensus       291 ~~~~~~~li~~mL~~dP~~R~t~~e~l~  318 (371)
T 2xrw_A          291 KASQARDLLSKMLVIDASKRISVDEALQ  318 (371)
T ss_dssp             HHHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             ccHHHHHHHHHHCcCChhhCCCHHHHhC
Confidence            1457899999999999999999999985

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=99.94  E-value=1.5e-27  Score=159.76  Aligned_cols=135  Identities=23%  Similarity=0.335  Sum_probs=92.2

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccccC-------CcccCCcccCccccccCCCCCCcchhhH
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQR-------GRCYYPAWMSPEALQKKPGDRNLEACDM   77 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~-------~~~~~~~~~~pe~~~~~~~~~~~~~~dv   77 (153)
                      ..-++.|||++++.|+||.+.||+++.++.+++.  |||.+....       ...+++.|++||.+.+.   ..+.++|+
T Consensus       121 i~~~l~~lH~~~i~H~dl~p~Nili~~~~~~kl~--dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di  195 (278)
T 3cok_A          121 IITGMLYLHSHGILHRDLTLSNLLLTRNMNIKIA--DFGLATQLKMPHEKHYTLCGTPNYISPEIATRS---AHGLESDV  195 (278)
T ss_dssp             HHHHHHHHHHTTEECSSCCGGGEEECTTCCEEEC--CCTTCEECC-------------------------------CTHH
T ss_pred             HHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEEE--eecceeeccCCCCcceeccCCCCcCCcchhcCC---CCCchhhH
Confidence            3457899999999999999999999999988888  999884332       24678899999998754   34578999


Q ss_pred             HHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581         78 WSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus        78 ~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      ||+|++++++++|..||...............  ....|...+..+.+++.+||+.||++|||++++++
T Consensus       196 ~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~  262 (278)
T 3cok_A          196 WSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLA--DYEMPSFLSIEAKDLIHQLLRRNPADRLSLSSVLD  262 (278)
T ss_dssp             HHHHHHHHHHHHSSCSSCCCSCC-----CCSS--CCCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred             HHHHHHHHHHHhCCCCCCChhHHHHHHHHhhc--ccCCccccCHHHHHHHHHHcccCHhhCCCHHHHhc
Confidence            99999999999999999776544433332222  23446678999999999999999999999999875

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=99.94  E-value=2.5e-27  Score=163.97  Aligned_cols=137  Identities=18%  Similarity=0.137  Sum_probs=103.8

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeecc-------------------------ccchhhccccccccccc----CCcccCC
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDE-------------------------DLTARINMADAQFSFQQ----RGRCYYP   55 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~-------------------------~~~~kl~~~d~g~~~~~----~~~~~~~   55 (153)
                      ..-++.|||++++.|+||++.||+++.                         ++.+||.  |||++...    ....+|+
T Consensus       146 i~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~--DFG~a~~~~~~~~~~~gt~  223 (360)
T 3llt_A          146 ILKALNYLRKMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLI--DFGCATFKSDYHGSIINTR  223 (360)
T ss_dssp             HHHHHHHHHHTTEECSCCSGGGEEESCTTCCEEEEEEECTTTCCEEEEEEESCCCEEEC--CCTTCEETTSCCCSCCSCG
T ss_pred             HHHHHHHHHHCCeeeCCCCcccEEEccccccccccchhcccccccccccccCCCCEEEE--eccCceecCCCCcCccCcc
Confidence            345789999999999999999999975                         5666666  99998533    3447889


Q ss_pred             cccCccccccCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhcccc----------------------
Q psy12581         56 AWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRI----------------------  113 (153)
Q Consensus        56 ~~~~pe~~~~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~----------------------  113 (153)
                      .|+|||.+.+.   .++.++|+||+|+++|++++|+.||.+.........+.......                      
T Consensus       224 ~y~aPE~~~~~---~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~  300 (360)
T 3llt_A          224 QYRAPEVILNL---GWDVSSDMWSFGCVLAELYTGSLLFRTHEHMEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDEL  300 (360)
T ss_dssp             GGCCHHHHTTC---CCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHTCCCCHHHHHHHTTSGGGGGEETTTT
T ss_pred             cccCcHHHcCC---CCCCccchHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHhcCCCCHHHHhhhhhccCccccCcccc
Confidence            99999999864   35589999999999999999999998766544433222110000                      


Q ss_pred             --CCCC--------------------CCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581        114 --TIPP--------------------GISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus       114 --~~~~--------------------~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                        ..|.                    ..+..+.+++.+||+.||++|||+.++++
T Consensus       301 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpta~elL~  355 (360)
T 3llt_A          301 KLAWPENASSINSIKHVKKCLPLYKIIKHELFCDFLYSILQIDPTLRPSPAELLK  355 (360)
T ss_dssp             EECTTTTCSCHHHHHHHHTCCCHHHHCCCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred             eecCcccccchhhhhhhhhcccccccchHHHHHHHHHHHhcCChhhCCCHHHHhc
Confidence              0011                    12367789999999999999999999875

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=99.94  E-value=1.1e-26  Score=155.38  Aligned_cols=136  Identities=21%  Similarity=0.273  Sum_probs=105.0

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc------CCcccCCcccCccccccCCCCCCcchhhHH
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ------RGRCYYPAWMSPEALQKKPGDRNLEACDMW   78 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~------~~~~~~~~~~~pe~~~~~~~~~~~~~~dv~   78 (153)
                      ..-++.|||++++.|+||.+.||+++.++.+++.  |||.+...      ....+++.|++||.+.+..  ..+.++|+|
T Consensus       120 i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~--dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~--~~~~~~Di~  195 (276)
T 2h6d_A          120 ILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIA--DFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRL--YAGPEVDIW  195 (276)
T ss_dssp             HHHHHHHHHHHCSSCCCCCGGGEEECTTSCEEEC--CCCGGGCCCC-------------CCTGGGTTSC--CCHHHHHHH
T ss_pred             HHHHHHHHHHCCCccCCCChhhEEECCCCCEEEe--ecccccccCCCcceecccCCccccCHHHHcCCC--CCCccchHH
Confidence            3456899999999999999999999999988888  99998543      2346788999999987642  224789999


Q ss_pred             HHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581         79 SFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus        79 s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      |+|++++++++|..||...........+...  ....|...+..+.+++.+||+.||++|||++++++
T Consensus       196 slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~l~  261 (276)
T 2h6d_A          196 SCGVILYALLCGTLPFDDEHVPTLFKKIRGG--VFYIPEYLNRSVATLLMHMLQVDPLKRATIKDIRE  261 (276)
T ss_dssp             HHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC--CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHHHhCCCCCCCCcHHHHHHHhhcC--cccCchhcCHHHHHHHHHHccCChhhCCCHHHHHh
Confidence            9999999999999999876655544443322  33456778999999999999999999999999986

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=99.94  E-value=5.7e-27  Score=162.10  Aligned_cols=137  Identities=15%  Similarity=0.015  Sum_probs=106.5

Q ss_pred             hhHHhhhh--cCCCCCCCeeeeeeeecc-ccchhhccccccccccc------CCcccCCcccCccccccCCCCCCcchhh
Q psy12581          6 IVYSFYLN--SKKSKTSNAFLFCCQIDE-DLTARINMADAQFSFQQ------RGRCYYPAWMSPEALQKKPGDRNLEACD   76 (153)
Q Consensus         6 ~~~~~~lh--~~~i~~~ni~~~~~~~~~-~~~~kl~~~d~g~~~~~------~~~~~~~~~~~pe~~~~~~~~~~~~~~d   76 (153)
                      .-++.|||  ++++.|+||++.||+++. ++.+||.  |||++...      ....+++.|++||.+.+..  .++.++|
T Consensus       139 ~~al~~lH~~~~~ivH~Dlkp~NIll~~~~~~~kl~--Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~~D  214 (360)
T 3e3p_A          139 IRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLC--DFGSAKKLSPSEPNVAYICSRYYRAPELIFGNQ--HYTTAVD  214 (360)
T ss_dssp             HHHHHHHTSTTTCCBCSCCCGGGEEEETTTTEEEEC--CCTTCBCCCTTSCCCSTTSCGGGCCHHHHTTCS--SCCTHHH
T ss_pred             HHHHHHHhCCCCCeecCcCCHHHEEEeCCCCcEEEe--eCCCceecCCCCCcccccCCcceeCHHHHcCCC--CCCcHHH
Confidence            34678999  999999999999999996 8888888  99998433      2346788999999986532  3568999


Q ss_pred             HHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccc------------------------------cCCCCCCCHHHHHH
Q psy12581         77 MWSFAVLLWELATREVPFADLTPMEVGMKVALEGLR------------------------------ITIPPGISSHLSKL  126 (153)
Q Consensus        77 v~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~------------------------------~~~~~~~~~~~~~l  126 (153)
                      +||+|+++|++++|..||.+.........+......                              ...+...+..+.++
T Consensus       215 i~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  294 (360)
T 3e3p_A          215 IWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDL  294 (360)
T ss_dssp             HHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHH
T ss_pred             HHHHHHHHHHHHhCCCCcCCCChHHHHHHHHHHcCCCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHH
Confidence            999999999999999999887665555444321000                              01122246789999


Q ss_pred             HHHHhcCCCCCCCCHHHHHH
Q psy12581        127 IRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus       127 ~~~cl~~~p~~Rps~~~~l~  146 (153)
                      +.+||+.||++|||+.++++
T Consensus       295 i~~~L~~dP~~Rpt~~e~l~  314 (360)
T 3e3p_A          295 LSALLQYLPEERMKPYEALC  314 (360)
T ss_dssp             HHHHTCSSGGGSCCHHHHTT
T ss_pred             HHHHhccCccccCCHHHHhc
Confidence            99999999999999999975

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=99.94  E-value=2.8e-27  Score=162.50  Aligned_cols=135  Identities=24%  Similarity=0.410  Sum_probs=111.8

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc-------CCcccCCcccCccccccCCCCCCcchhhH
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ-------RGRCYYPAWMSPEALQKKPGDRNLEACDM   77 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~-------~~~~~~~~~~~pe~~~~~~~~~~~~~~dv   77 (153)
                      ..-++.|||++++.|+||.+.||+++.++.+|+.  |||.+...       ....+++.|++||.+.+.   ..+.++|+
T Consensus       150 i~~aL~~LH~~~ivH~dlkp~NIl~~~~~~~kl~--Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~Di  224 (335)
T 2owb_A          150 IVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIG--DFGLATKVEYDGERKKVLCGTPNYIAPEVLSKK---GHSFEVDV  224 (335)
T ss_dssp             HHHHHHHHHHTTEECSCCCGGGEEECTTCCEEEC--CCTTCEECCSTTCCBCCCCSCCSSCCHHHHHTS---CBCTHHHH
T ss_pred             HHHHHHHHHHCCCEecCCCchhEEEcCCCCEEEe--eccCceecccCcccccccCCCccccCHHHhccC---CCCchhhH
Confidence            3457899999999999999999999999988888  99998432       234688899999998764   34579999


Q ss_pred             HHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581         78 WSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus        78 ~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      ||+|+++|++++|..||...........+...  ....+...+..+.+++.+||+.||++|||++++++
T Consensus       225 ~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~  291 (335)
T 2owb_A          225 WSIGCIMYTLLVGKPPFETSCLKETYLRIKKN--EYSIPKHINPVAASLIQKMLQTDPTARPTINELLN  291 (335)
T ss_dssp             HHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHT--CCCCCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred             HHHHHHHHHHHHCcCCCCCCCHHHHHHHHhcC--CCCCCccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            99999999999999999877655554444333  34456778999999999999999999999999875

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=99.94  E-value=6.1e-27  Score=168.52  Aligned_cols=136  Identities=23%  Similarity=0.270  Sum_probs=110.6

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccc---hhhccccccccccc------CCcccCCcccCccccccCCCCCCcchh
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLT---ARINMADAQFSFQQ------RGRCYYPAWMSPEALQKKPGDRNLEAC   75 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~---~kl~~~d~g~~~~~------~~~~~~~~~~~pe~~~~~~~~~~~~~~   75 (153)
                      ..-++.|||++++.|+||++.||+++.++.   +|+.  |||++...      ....||+.|+|||.+.+    .++.++
T Consensus       155 i~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~--Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~  228 (504)
T 3q5i_A          155 ILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIV--DFGLSSFFSKDYKLRDRLGTAYYIAPEVLKK----KYNEKC  228 (504)
T ss_dssp             HHHHHHHHHHTTEECSCCSGGGEEESSTTCCSSEEEC--CCTTCEECCTTSCBCCCCSCTTTCCHHHHTT----CBCTHH
T ss_pred             HHHHHHHHHHCCeEeCCCcHHHEEEecCCCCccEEEE--ECCCCEEcCCCCccccccCCcCCCCHHHhcc----CCCchH
Confidence            345789999999999999999999998763   5555  99998432      34578999999999864    356899


Q ss_pred             hHHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCC--CCCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581         76 DMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITI--PPGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus        76 dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      |+||+|+++|++++|..||.+.........+.......+.  ....+..+.+++.+||+.||++|||++++++
T Consensus       229 DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~  301 (504)
T 3q5i_A          229 DVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYYFDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALN  301 (504)
T ss_dssp             HHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             HHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCccccCCCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence            9999999999999999999988777666665544332221  2467899999999999999999999999974

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=99.94  E-value=5e-27  Score=158.44  Aligned_cols=135  Identities=24%  Similarity=0.410  Sum_probs=111.5

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc-------CCcccCCcccCccccccCCCCCCcchhhH
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ-------RGRCYYPAWMSPEALQKKPGDRNLEACDM   77 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~-------~~~~~~~~~~~pe~~~~~~~~~~~~~~dv   77 (153)
                      ..-++.|||++++.|+||.+.||+++.++.+|+.  |||.+...       ....+++.|++||.+.+.   ..+.++|+
T Consensus       124 i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~--dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di  198 (294)
T 2rku_A          124 IVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIG--DFGLATKVEYDGERKKVLCGTPNYIAPEVLSKK---GHSFEVDV  198 (294)
T ss_dssp             HHHHHHHHHHTTEECCCCCGGGEEECTTCCEEEC--CCTTCEECCSTTCCBCCCCSCCSSCCHHHHTTS---CBCTHHHH
T ss_pred             HHHHHHHHHHCCccccCCChHhEEEcCCCCEEEE--eccCceecccCccccccccCCCCcCCcchhccC---CCCchhhH
Confidence            3457899999999999999999999999988888  99998432       223678899999998764   34579999


Q ss_pred             HHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581         78 WSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus        78 ~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      ||+|++++++++|..||...........+...  ....+...+..+.+++.+||+.||++|||++++++
T Consensus       199 ~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~  265 (294)
T 2rku_A          199 WSIGCIMYTLLVGKPPFETSCLKETYLRIKKN--EYSIPKHINPVAASLIQKMLQTDPTARPTINELLN  265 (294)
T ss_dssp             HHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTT--CCCCCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred             HHHHHHHHHHHhCCCCCCCCCHHHHHHHHhhc--cCCCccccCHHHHHHHHHHcccChhhCcCHHHHhh
Confidence            99999999999999999877655544443322  34557778999999999999999999999999875

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=99.94  E-value=9.1e-27  Score=159.06  Aligned_cols=140  Identities=19%  Similarity=0.181  Sum_probs=107.1

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccc---hhhcccccccccccCC------cccCCcccCccccccCCCCCCcchh
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLT---ARINMADAQFSFQQRG------RCYYPAWMSPEALQKKPGDRNLEAC   75 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~---~kl~~~d~g~~~~~~~------~~~~~~~~~pe~~~~~~~~~~~~~~   75 (153)
                      ..-++.|||++++.|+||.+.||+++.++.   +|+.  |||.+.....      ..+++.|++||.+.......++.++
T Consensus       123 i~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~--Dfg~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~  200 (322)
T 2ycf_A          123 MLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKIT--DFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAV  200 (322)
T ss_dssp             HHHHHHHHHHTTEECCCCSGGGEEESSSSSSCCEEEC--CCTTCEECCCCHHHHHHHSCCTTCCHHHHHHTTTTTCTTHH
T ss_pred             HHHHHHHHHHCCeeccCCCHHHEEEecCCCCCeEEEc--cCccceecccccccccccCCcCccCchhhccCCCCCCCchh
Confidence            345789999999999999999999987664   6666  9999854432      3588999999997532233466899


Q ss_pred             hHHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhcccc---CCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581         76 DMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRI---TIPPGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus        76 dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      |+||+|+++|++++|..||...............+...   ..+...+..+.+++.+||..||++||++.++++
T Consensus       201 Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~  274 (322)
T 2ycf_A          201 DCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALR  274 (322)
T ss_dssp             HHHHHHHHHHHHHHSSCSSCSTTCSSCHHHHHHHTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             hHHHHHHHHHHHHhCCCCCcccchHHHHHHHHHhCccccCchhhhhcCHHHHHHHHHHcccCHhhCCCHHHHhh
Confidence            99999999999999999997755443333333222211   122457889999999999999999999999874

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=99.94  E-value=5.3e-27  Score=159.40  Aligned_cols=138  Identities=17%  Similarity=0.221  Sum_probs=104.3

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc-------CCcccCCcccCccccccCCCCCCcchhhH
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ-------RGRCYYPAWMSPEALQKKPGDRNLEACDM   77 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~-------~~~~~~~~~~~pe~~~~~~~~~~~~~~dv   77 (153)
                      ..-++.|||++++.|+||.+.||+++.++.+++.  |||.+...       ....+++.|++||.+.+.  ..++.++|+
T Consensus       111 l~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~--Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~~Di  186 (311)
T 4agu_A          111 TLQAVNFCHKHNCIHRDVKPENILITKHSVIKLC--DFGFARLLTGPSDYYDDEVATRWYRSPELLVGD--TQYGPPVDV  186 (311)
T ss_dssp             HHHHHHHHHHTTEECCCCSGGGEEECTTSCEEEC--CCTTCEECC------------GGGCCHHHHHTC--SCCCTHHHH
T ss_pred             HHHHHHHHHHCCCcCCCCChhhEEEcCCCCEEEe--eCCCchhccCcccccCCCcCCccccChHHHhcC--CCCCcchhh
Confidence            3457899999999999999999999999988888  99998432       234678899999998752  234689999


Q ss_pred             HHHHHHHHHHHhCCCCCCCCCchhhhHHHHhh-------------------ccccCCC----------CCCCHHHHHHHH
Q psy12581         78 WSFAVLLWELATREVPFADLTPMEVGMKVALE-------------------GLRITIP----------PGISSHLSKLIR  128 (153)
Q Consensus        78 ~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~-------------------~~~~~~~----------~~~~~~~~~l~~  128 (153)
                      ||+|++++++++|..||.+.........+...                   ....+.+          ...+..+.+++.
T Consensus       187 ~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  266 (311)
T 4agu_A          187 WAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLK  266 (311)
T ss_dssp             HHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCGGGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHH
T ss_pred             HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhcccccccccccccccccccCcCCCccccchhhhhcccccHHHHHHHH
Confidence            99999999999999999887655443322110                   0011111          346788999999


Q ss_pred             HHhcCCCCCCCCHHHHHH
Q psy12581        129 ICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus       129 ~cl~~~p~~Rps~~~~l~  146 (153)
                      +||+.||++|||++++++
T Consensus       267 ~~L~~dP~~Rpt~~ell~  284 (311)
T 4agu_A          267 GCLHMDPTERLTCEQLLH  284 (311)
T ss_dssp             HHCCSSTTTSCCHHHHHT
T ss_pred             HHccCChhhcCCHHHHhc
Confidence            999999999999999985

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=99.94  E-value=4e-27  Score=161.80  Aligned_cols=131  Identities=24%  Similarity=0.262  Sum_probs=106.4

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccccC------CcccCCcccCccccccCCCCCCcchhhHH
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQR------GRCYYPAWMSPEALQKKPGDRNLEACDMW   78 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~------~~~~~~~~~~pe~~~~~~~~~~~~~~dv~   78 (153)
                      ..-++.|||++++.|+||++.||+++.++.+|+.  |||.+....      ...||+.|++||.+.+...  .+.++|+|
T Consensus       139 i~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kL~--Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~--~~~~~Diw  214 (335)
T 3dls_A          139 LVSAVGYLRLKDIIHRDIKDENIVIAEDFTIKLI--DFGSAAYLERGKLFYTFCGTIEYCAPEVLMGNPY--RGPELEMW  214 (335)
T ss_dssp             HHHHHHHHHHTTEECSCCSGGGEEECTTSCEEEC--CCTTCEECCTTCCBCEECSCGGGCCHHHHTTCCB--CSHHHHHH
T ss_pred             HHHHHHHHHhCCeEEeccCHHHEEEcCCCcEEEe--ecccceECCCCCceeccCCCccccChhhhcCCCC--CCCcccch
Confidence            3457899999999999999999999999988888  999984332      2368999999999876422  25789999


Q ss_pred             HHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHH
Q psy12581         79 SFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPI  147 (153)
Q Consensus        79 s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~  147 (153)
                      |+|+++|++++|..||.....      ....  ....+...+..+.+++.+||+.||++|||++++++.
T Consensus       215 slG~il~el~~g~~pf~~~~~------~~~~--~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~ell~h  275 (335)
T 3dls_A          215 SLGVTLYTLVFEENPFCELEE------TVEA--AIHPPYLVSKELMSLVSGLLQPVPERRTTLEKLVTD  275 (335)
T ss_dssp             HHHHHHHHHHHSSCSCSSGGG------GTTT--CCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred             hHHHHHHHHHhCCCchhhHHH------HHhh--ccCCCcccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence            999999999999999965321      1111  233456689999999999999999999999999863

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=99.94  E-value=9.2e-27  Score=156.21  Aligned_cols=137  Identities=16%  Similarity=0.106  Sum_probs=109.8

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc------CCcccCCcccCccccccCCCCCCcchhhHH
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ------RGRCYYPAWMSPEALQKKPGDRNLEACDMW   78 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~------~~~~~~~~~~~pe~~~~~~~~~~~~~~dv~   78 (153)
                      ..-++.|||++++.|+||.+.||+++.++.+++.  |||.+...      ....+++.|++||.+.+.   .++.++|+|
T Consensus       131 i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~--Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di~  205 (284)
T 2a19_B          131 ITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIG--DFGLVTSLKNDGKRTRSKGTLRYMSPEQISSQ---DYGKEVDLY  205 (284)
T ss_dssp             HHHHHHHHHHTTEECSCCSGGGEEEEETTEEEEC--CCTTCEESSCCSCCCCCCSCCTTSCHHHHHCS---CCCTHHHHH
T ss_pred             HHHHHHHHHhCCeeeccCCHHHEEEcCCCCEEEC--cchhheeccccccccccCCcccccChhhhccC---CCcchhhhH
Confidence            3457899999999999999999999999988888  99987432      234688999999998764   345899999


Q ss_pred             HHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHhhhh
Q psy12581         79 SFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKMK  152 (153)
Q Consensus        79 s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~~~~  152 (153)
                      |+|++++++++|..|+....  . ......   ....+...+..+.+++.+||..||++|||+.++++.|..++
T Consensus       206 slG~il~~l~~~~~~~~~~~--~-~~~~~~---~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~  273 (284)
T 2a19_B          206 ALGLILAELLHVCDTAFETS--K-FFTDLR---DGIISDIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWK  273 (284)
T ss_dssp             HHHHHHHHHHSCCSSHHHHH--H-HHHHHH---TTCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHhcCCcchhHH--H-HHHHhh---cccccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHh
Confidence            99999999999988764211  1 111111   22345668899999999999999999999999999998875

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=99.94  E-value=1.8e-26  Score=157.03  Aligned_cols=139  Identities=16%  Similarity=0.225  Sum_probs=106.3

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc---------CCcccCCcccCccccccCC--------
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ---------RGRCYYPAWMSPEALQKKP--------   67 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~---------~~~~~~~~~~~pe~~~~~~--------   67 (153)
                      ..-++.|||++++.|+||.+.||+++. +.+|+.  |||.+...         ....+++.|++||.+.+..        
T Consensus       136 i~~aL~~LH~~~ivH~dlkp~NIl~~~-~~~kL~--Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~  212 (313)
T 3cek_A          136 MLEAVHTIHQHGIVHSDLKPANFLIVD-GMLKLI--DFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKS  212 (313)
T ss_dssp             HHHHHHHHHHTTCCCCCCCGGGEEEET-TEEEEC--CCSSSCC--------------CCGGGCCHHHHTTCC--------
T ss_pred             HHHHHHHHHHCCceecCCCcccEEEEC-CeEEEe--eccccccccCccccccccCCCCCCCcCCHHHHhhcccccccccc
Confidence            345789999999999999999999964 667777  99998432         2336789999999986521        


Q ss_pred             CCCCcchhhHHHHHHHHHHHHhCCCCCCCCCchh-hhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581         68 GDRNLEACDMWSFAVLLWELATREVPFADLTPME-VGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus        68 ~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      ...++.++|+||+|++++++++|..||....... ..............+...+..+.+++.+||..||++||++.++++
T Consensus       213 ~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~  292 (313)
T 3cek_A          213 KSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLA  292 (313)
T ss_dssp             --CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             cccCCchHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHhcccccCCcccchHHHHHHHHHHccCCcccCcCHHHHhc
Confidence            1245689999999999999999999997754332 223333334445566777899999999999999999999999985

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=99.94  E-value=7.3e-27  Score=168.84  Aligned_cols=130  Identities=22%  Similarity=0.277  Sum_probs=106.2

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc-------CCcccCCcccCccccccCCCCCCcchhhH
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ-------RGRCYYPAWMSPEALQKKPGDRNLEACDM   77 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~-------~~~~~~~~~~~pe~~~~~~~~~~~~~~dv   77 (153)
                      ...++.|||+++|.|+||++.||+++.+|.+||.  |||++...       ...+||+.|+|||.+.+.   .++.++|+
T Consensus       298 i~~aL~~LH~~gIvHrDLKP~NILl~~~g~vkL~--DFGla~~~~~~~~~~~~~~GT~~Y~APE~l~~~---~~~~~~Di  372 (543)
T 3c4z_A          298 IVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRIS--DLGLAVELKAGQTKTKGYAGTPGFMAPELLLGE---EYDFSVDY  372 (543)
T ss_dssp             HHHHHHHHHHTTEECCCCCGGGEEECTTSCEEEC--CCTTCEECCTTCCCBCCCCSCTTTSCHHHHTTC---CBCTHHHH
T ss_pred             HHHHHHHHHHcCCcccCCChHHEEEeCCCCEEEe--ecceeeeccCCCcccccccCCccccChhhhcCC---CCChHHhc
Confidence            4567899999999999999999999999999888  99998432       234899999999999864   34589999


Q ss_pred             HHHHHHHHHHHhCCCCCCCCCc----hhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCH
Q psy12581         78 WSFAVLLWELATREVPFADLTP----MEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTF  141 (153)
Q Consensus        78 ~s~g~~~~~~~~g~~p~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~  141 (153)
                      ||+|+++|++++|..||.+...    ......+...  ....|..++..+.+++.+||+.||++||++
T Consensus       373 wSlGvilyelltG~~PF~~~~~~~~~~~~~~~i~~~--~~~~p~~~s~~~~~li~~lL~~dP~~R~~~  438 (543)
T 3c4z_A          373 FALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQ--AVTYPDKFSPASKDFCEALLQKDPEKRLGF  438 (543)
T ss_dssp             HHHHHHHHHHHHSSCSSCCTTCCCCHHHHHHHHHHC--CCCCCTTSCHHHHHHHHHHSCSSGGGSCCC
T ss_pred             CcchHHHHHHHhCCCCCCCCccchhHHHHHHHHhhc--ccCCCcccCHHHHHHHHHhccCCHhHCCCC
Confidence            9999999999999999977532    2222233322  345577899999999999999999999975

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=99.94  E-value=2e-27  Score=163.27  Aligned_cols=146  Identities=21%  Similarity=0.307  Sum_probs=109.5

Q ss_pred             hhhHHhhhh--------cCCCCCCCeeeeeeeeccccchhhccccccccccc-----------CCcccCCcccCcccccc
Q psy12581          5 KIVYSFYLN--------SKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ-----------RGRCYYPAWMSPEALQK   65 (153)
Q Consensus         5 ~~~~~~~lh--------~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~-----------~~~~~~~~~~~pe~~~~   65 (153)
                      ..-++.|||        ++++.|+||++.||+++.++.+||.  |||++...           ....+++.|++||.+.+
T Consensus       148 i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~~~~~~kL~--Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  225 (342)
T 1b6c_B          148 TASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIA--DLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDD  225 (342)
T ss_dssp             HHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEECTTSCEEEC--CCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTS
T ss_pred             HHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEECCCCCEEEE--ECCCceeccccccccccccccCCcCcccCCHhhhcc
Confidence            455789999        8999999999999999999988888  99988322           23368899999999875


Q ss_pred             CCCC---CCcchhhHHHHHHHHHHHHhC----------CCCCCCCCch----hhhHH-HHhhccccCCCC-----CCCHH
Q psy12581         66 KPGD---RNLEACDMWSFAVLLWELATR----------EVPFADLTPM----EVGMK-VALEGLRITIPP-----GISSH  122 (153)
Q Consensus        66 ~~~~---~~~~~~dv~s~g~~~~~~~~g----------~~p~~~~~~~----~~~~~-~~~~~~~~~~~~-----~~~~~  122 (153)
                      ....   ..+.++|+||+|+++|++++|          ..||......    ..... +......+..+.     ..+..
T Consensus       226 ~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  305 (342)
T 1b6c_B          226 SINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRV  305 (342)
T ss_dssp             CCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGTSHHHHH
T ss_pred             cccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCccccCcCcccHHHHHHHHHHHHhCCCCcccccchhHHHH
Confidence            4221   123679999999999999999          7788654322    11122 222223333332     23357


Q ss_pred             HHHHHHHHhcCCCCCCCCHHHHHHHHhhhh
Q psy12581        123 LSKLIRICMNEDPGKRPTFDMVLPILDKMK  152 (153)
Q Consensus       123 ~~~l~~~cl~~~p~~Rps~~~~l~~L~~~~  152 (153)
                      +.+++.+||+.||++|||++++++.|+++.
T Consensus       306 l~~li~~cl~~dp~~Rps~~~i~~~L~~i~  335 (342)
T 1b6c_B          306 MAKIMRECWYANGAARLTALRIKKTLSQLS  335 (342)
T ss_dssp             HHHHHHHHCCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHhccChhhCCCHHHHHHHHHHHH
Confidence            889999999999999999999999999874

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=99.94  E-value=9.1e-27  Score=164.78  Aligned_cols=140  Identities=16%  Similarity=0.165  Sum_probs=101.2

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeecc---ccchhhccccccccccc----------CCcccCCcccCccccccCCCCCC
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDE---DLTARINMADAQFSFQQ----------RGRCYYPAWMSPEALQKKPGDRN   71 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~---~~~~kl~~~d~g~~~~~----------~~~~~~~~~~~pe~~~~~~~~~~   71 (153)
                      ..-++.|||+++|.|+||++.||+++.   ++..++.++|||++...          ....||+.|+|||.+........
T Consensus       127 i~~aL~~LH~~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~  206 (432)
T 3p23_A          127 TTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENP  206 (432)
T ss_dssp             HHHHHHHHHHTTCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC------------CCSCTTSCCGGGTSCC---CC
T ss_pred             HHHHHHHHHHCcCEeCCCCHHHEEEecCCCCCceeEEEecccceeeccCCCcceeeccccCCCcCccChhhhhcccccCC
Confidence            345789999999999999999999953   45556556699998432          23468999999999875433445


Q ss_pred             cchhhHHHHHHHHHHHHh-CCCCCCCCCchhhhHHHHhhccccC---CCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581         72 LEACDMWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRIT---IPPGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus        72 ~~~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      +.++|+||+|++++++++ |..||.........  .........   .+...+..+.+++.+||+.||++|||++++++
T Consensus       207 t~~~DiwSlG~il~ellt~g~~pf~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~  283 (432)
T 3p23_A          207 TYTVDIFSAGCVFYYVISEGSHPFGKSLQRQAN--ILLGACSLDCLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLK  283 (432)
T ss_dssp             CTHHHHHHHHHHHHHHHTTSCBTTBSTTTHHHH--HHTTCCCCTTSCTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             CcHHHHHHHHHHHHHHHcCCCCCcchhhHHHHH--HHhccCCccccCccccccHHHHHHHHHHHhCCHhhCCCHHHHHh
Confidence            678999999999999999 89998654433322  111211111   11223456889999999999999999999984

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=99.94  E-value=8.7e-27  Score=158.52  Aligned_cols=137  Identities=20%  Similarity=0.309  Sum_probs=109.5

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc-------CCcccCCcccCccccccCCCCCCcchhhH
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ-------RGRCYYPAWMSPEALQKKPGDRNLEACDM   77 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~-------~~~~~~~~~~~pe~~~~~~~~~~~~~~dv   77 (153)
                      ..-++.|||++++.|+||.+.||+++.++.+++.  |||.+...       ....+++.|++||.+.+.   .++.++|+
T Consensus       134 i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~--dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~Di  208 (314)
T 3com_A          134 TLKGLEYLHFMRKIHRDIKAGNILLNTEGHAKLA--DFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEI---GYNCVADI  208 (314)
T ss_dssp             HHHHHHHHHHTTEECCCCSGGGEEECTTCCEEEC--CCTTCEECBTTBSCBCCCCSCGGGCCHHHHSSS---CBCTTHHH
T ss_pred             HHHHHHHHHhCCCcCCCcCHHHEEECCCCCEEEe--ecccchhhhhhccccCccCCCCCccChhhcCCC---CCCccccH
Confidence            3457899999999999999999999999988888  99988432       234678899999998764   34578999


Q ss_pred             HHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhc-cccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581         78 WSFAVLLWELATREVPFADLTPMEVGMKVALEG-LRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus        78 ~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      ||+|++++++++|..||................ .....+..++..+.+++.+||..||++|||+.++++
T Consensus       209 ~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~  278 (314)
T 3com_A          209 WSLGITAIEMAEGKPPYADIHPMRAIFMIPTNPPPTFRKPELWSDNFTDFVKQCLVKSPEQRATATQLLQ  278 (314)
T ss_dssp             HHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCSSGGGSCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred             HHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCcccCCcccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence            999999999999999998766554433332221 122234557899999999999999999999999975

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=99.94  E-value=7.7e-27  Score=157.96  Aligned_cols=140  Identities=23%  Similarity=0.340  Sum_probs=108.3

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccc-------cCCcccCCcccCccccccC--CCCCCcchh
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQ-------QRGRCYYPAWMSPEALQKK--PGDRNLEAC   75 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~-------~~~~~~~~~~~~pe~~~~~--~~~~~~~~~   75 (153)
                      ..-++.|||++++.|+||.+.||+++.++.+|+.  |||++..       .....+++.|++||.+...  ....++.++
T Consensus       126 i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~--Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~  203 (302)
T 2j7t_A          126 MLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLA--DFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKA  203 (302)
T ss_dssp             HHHHHHHHHHTTCCCCCCSGGGEEECTTSCEEEC--CCHHHHHHHHHHHC-----CCGGGCCHHHHHHHHTTSTTTTTHH
T ss_pred             HHHHHHHHhcCCcccCCCCHHHEEECCCCCEEEE--ECCCCccccccccccccccCChhhcCCeeeccccCCCCCCchhh
Confidence            3456899999999999999999999999988888  9998622       2344788999999987421  122456899


Q ss_pred             hHHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhcc-ccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581         76 DMWSFAVLLWELATREVPFADLTPMEVGMKVALEGL-RITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus        76 dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      |+||+|++++++++|..||................. ....+..++..+.+++.+||..||++|||+.++++
T Consensus       204 Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  275 (302)
T 2j7t_A          204 DIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPTLLTPSKWSVEFRDFLKIALDKNPETRPSAAQLLE  275 (302)
T ss_dssp             HHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCSSGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTT
T ss_pred             hHHHHHHHHHHHhcCCCCCccCCHHHHHHHHhccCCcccCCccccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence            999999999999999999988776655444433322 22234567889999999999999999999999874

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=99.94  E-value=9.8e-27  Score=155.58  Aligned_cols=138  Identities=17%  Similarity=0.179  Sum_probs=108.0

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc---------CCcccCCcccCccccccCCCCCCcchh
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ---------RGRCYYPAWMSPEALQKKPGDRNLEAC   75 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~---------~~~~~~~~~~~pe~~~~~~~~~~~~~~   75 (153)
                      ..-++.|||++++.|+||.+.||+++.++.+++.  |||.+...         ....+++.|++||.+.+..  ..+.++
T Consensus       114 i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~--dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~--~~~~~~  189 (276)
T 2yex_A          114 LMAGVVYLHGIGITHRDIKPENLLLDERDNLKIS--DFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRRE--FHAEPV  189 (276)
T ss_dssp             HHHHHHHHHHTTEECSCCSGGGEEECTTCCEEEC--CCTTCEECEETTEECCBCCCCSCGGGCCGGGGTCSS--BCHHHH
T ss_pred             HHHHHHHHHhCCeeccCCChHHEEEccCCCEEEe--eCCCccccCCCcchhcccCCccccCccChHHHhcCC--CCCCcc
Confidence            3457889999999999999999999999988888  99987421         2346889999999987532  135789


Q ss_pred             hHHHHHHHHHHHHhCCCCCCCCCchhhhHHHHh-hccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581         76 DMWSFAVLLWELATREVPFADLTPMEVGMKVAL-EGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus        76 dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      |+||+|++++++++|..||.............. ...........+..+.+++.+||+.||++|||++++++
T Consensus       190 Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  261 (276)
T 2yex_A          190 DVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKK  261 (276)
T ss_dssp             HHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHHHTTCTTSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             hHHHHHHHHHHHHhCCCCCCCCchHHHHHHHhhhcccccCchhhcCHHHHHHHHHHCCCCchhCCCHHHHhc
Confidence            999999999999999999977654433222222 22222223457899999999999999999999999875

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=99.94  E-value=3.6e-27  Score=171.09  Aligned_cols=136  Identities=18%  Similarity=0.225  Sum_probs=109.6

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc------CCcccCCcccCccccccCCCCCCcchhhHH
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ------RGRCYYPAWMSPEALQKKPGDRNLEACDMW   78 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~------~~~~~~~~~~~pe~~~~~~~~~~~~~~dv~   78 (153)
                      ..-++.|||+++|.|+||++.||+++.+|.+||.  |||++...      ...+||+.|+|||.+.+.   .++.++|+|
T Consensus       295 Il~aL~yLH~~gIvHrDLKPeNILld~~g~vKL~--DFGla~~~~~~~~~~~~~GT~~Y~APEvl~~~---~~~~~~Diw  369 (576)
T 2acx_A          295 ICCGLEDLHRERIVYRDLKPENILLDDHGHIRIS--DLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNE---RYTFSPDWW  369 (576)
T ss_dssp             HHHHHHHHHHTTEECCCCCGGGEEECTTSCEEEC--CCTTCEECCTTCCEECCCSCGGGCCHHHHTTC---EESSHHHHH
T ss_pred             HHHHHHHHHHCCEeccCCchheEEEeCCCCeEEE--ecccceecccCccccccCCCccccCHHHHcCC---CCCccchHH
Confidence            4567899999999999999999999999999988  99998432      335789999999998764   345899999


Q ss_pred             HHHHHHHHHHhCCCCCCCCCch---hhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCC-----CHHHHHH
Q psy12581         79 SFAVLLWELATREVPFADLTPM---EVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRP-----TFDMVLP  146 (153)
Q Consensus        79 s~g~~~~~~~~g~~p~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----s~~~~l~  146 (153)
                      |+|+++|++++|..||.+....   ....... .......+..++..+.+++.+||+.||++||     +++++++
T Consensus       370 SLGvilyeLltG~~PF~~~~~~~~~~~i~~~i-~~~~~~~p~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~  444 (576)
T 2acx_A          370 ALGCLLYEMIAGQSPFQQRKKKIKREEVERLV-KEVPEEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKE  444 (576)
T ss_dssp             HHHHHHHHHHHSSCSSSCSSSCCCHHHHHHHH-HHCCCCCCTTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHT
T ss_pred             HHHHHHHHHHhCCCCCcccccchhHHHHHHHh-hcccccCCccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHh
Confidence            9999999999999999775432   1112222 1223455677899999999999999999999     6788764

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=99.94  E-value=1.6e-26  Score=160.05  Aligned_cols=137  Identities=19%  Similarity=0.229  Sum_probs=104.3

Q ss_pred             hhhHHhhhhcC-CCCCCCeeeeeeeeccccchhhcccccccccc-----cCCcccCCcccCccccccCCCCCCcchhhHH
Q psy12581          5 KIVYSFYLNSK-KSKTSNAFLFCCQIDEDLTARINMADAQFSFQ-----QRGRCYYPAWMSPEALQKKPGDRNLEACDMW   78 (153)
Q Consensus         5 ~~~~~~~lh~~-~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~-----~~~~~~~~~~~~pe~~~~~~~~~~~~~~dv~   78 (153)
                      ..-++.|||++ ++.|+||.+.||+++.++.++|.  |||.+..     .....+++.|++||.+.+.   .++.++|+|
T Consensus       140 i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~--Dfg~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~Di~  214 (360)
T 3eqc_A          140 VIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLC--DFGVSGQLIDSMANSFVGTRSYMSPERLQGT---HYSVQSDIW  214 (360)
T ss_dssp             HHHHHHHHHHHHCCCCSCCSGGGEEECTTCCEEEC--CCCCCHHHHHHC----CCCCTTCCHHHHTTC---CCSHHHHHH
T ss_pred             HHHHHHHHHHhCCEEcCCccHHHEEECCCCCEEEE--ECCCCcccccccccCCCCCCCeECHHHHcCC---CCCchhhHH
Confidence            34578899986 89999999999999999988888  9998732     2345789999999998764   456899999


Q ss_pred             HHHHHHHHHHhCCCCCCCCCchhhhHH-----------------------------------------HHhhccccCC-C
Q psy12581         79 SFAVLLWELATREVPFADLTPMEVGMK-----------------------------------------VALEGLRITI-P  116 (153)
Q Consensus        79 s~g~~~~~~~~g~~p~~~~~~~~~~~~-----------------------------------------~~~~~~~~~~-~  116 (153)
                      |+|++++++++|..||...........                                         .......... +
T Consensus       215 slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  294 (360)
T 3eqc_A          215 SMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLNKFGMDSRPPMAIFELLDYIVNEPPPKLPS  294 (360)
T ss_dssp             HHHHHHHHHHHTSCCSSCCCHHHHHHHHC------------------------------CCCHHHHHHHHHHSCCCCCCT
T ss_pred             HHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCCcccccccCCCCcccchhhhhHHhccCCCCCCc
Confidence            999999999999999976543322110                                         0011111111 2


Q ss_pred             CCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581        117 PGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus       117 ~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      ...+..+.+++.+||+.||++|||++++++
T Consensus       295 ~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  324 (360)
T 3eqc_A          295 GVFSLEFQDFVNKCLIKNPAERADLKQLMV  324 (360)
T ss_dssp             TTSCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred             ccccHHHHHHHHHHhhcChhhCCCHHHHhh
Confidence            346889999999999999999999999975

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=99.94  E-value=6.2e-27  Score=157.87  Aligned_cols=139  Identities=24%  Similarity=0.284  Sum_probs=109.8

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeecc-ccchhhccccccccccc-------CCcccCCcccCccccccCCCCCCcchhh
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDE-DLTARINMADAQFSFQQ-------RGRCYYPAWMSPEALQKKPGDRNLEACD   76 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~-~~~~kl~~~d~g~~~~~-------~~~~~~~~~~~pe~~~~~~~~~~~~~~d   76 (153)
                      ..-++.|||++++.|+||.+.||+++. ++.+++.  |||.+...       ....+++.|++||.+.+... .++.++|
T Consensus       131 i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~kl~--Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~-~~~~~~D  207 (295)
T 2clq_A          131 ILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKIS--DFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPR-GYGKAAD  207 (295)
T ss_dssp             HHHHHHHHHHTTEECCCCSGGGEEEETTTCCEEEC--CTTTCEESCC-----CCCCCCGGGCCHHHHHHGGG-GCSHHHH
T ss_pred             HHHHHHHHHhCCEEccCCChhhEEEECCCCCEEEe--ecccccccCCCCCcccccCCCccccChhhhcCCCC-CCCcHHH
Confidence            345789999999999999999999987 7888888  99988432       23467889999999865321 2458999


Q ss_pred             HHHHHHHHHHHHhCCCCCCCCCchhh-hHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581         77 MWSFAVLLWELATREVPFADLTPMEV-GMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus        77 v~s~g~~~~~~~~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      +||+|++++++++|..||........ ..........+..+...+..+.+++.+||+.||++||++.++++
T Consensus       208 i~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~  278 (295)
T 2clq_A          208 IWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEIPESMSAEAKAFILKCFEPDPDKRACANDLLV  278 (295)
T ss_dssp             HHHHHHHHHHHHHTSCTTGGGSSHHHHHHHHHHHCCCCCCCTTSCHHHHHHHHHTTCSSTTTSCCHHHHHT
T ss_pred             HHHHHHHHHHHHHCCCCccCCCchhHHHHhhccccccccccccCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence            99999999999999999976543322 22222233445567788999999999999999999999999874

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=99.94  E-value=2.6e-26  Score=163.52  Aligned_cols=138  Identities=19%  Similarity=0.209  Sum_probs=98.8

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc----------------------------------CC
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ----------------------------------RG   50 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~----------------------------------~~   50 (153)
                      ..-++.|||+++|+|+||++.||+++.++.+||.  |||++...                                  ..
T Consensus       165 i~~aL~~LH~~~iiHrDlKp~NILl~~~~~~kl~--DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (458)
T 3rp9_A          165 LLVGVKYVHSAGILHRDLKPANCLVNQDCSVKVC--DFGLARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTG  242 (458)
T ss_dssp             HHHHHHHHHHTTCBCCCCCGGGEEECTTCCEEEC--CCTTCBCTTSCTTCCCCCC-------------------------
T ss_pred             HHHHHHHHHhCCcCCCCCChhhEEECCCCCEeec--ccccchhccCccccccccccCccccccccccccccccccccccC
Confidence            3457899999999999999999999999999888  99998432                                  22


Q ss_pred             cccCCcccCccccccCCCCCCcchhhHHHHHHHHHHHHh-----------CCCCCCCCCc--------------------
Q psy12581         51 RCYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWELAT-----------REVPFADLTP--------------------   99 (153)
Q Consensus        51 ~~~~~~~~~pe~~~~~~~~~~~~~~dv~s~g~~~~~~~~-----------g~~p~~~~~~--------------------   99 (153)
                      .+||+.|+|||++...  ..++.++|+||+|+++||+++           |+++|.+...                    
T Consensus       243 ~~gt~~Y~aPE~~~~~--~~~~~~~DiwSlG~il~elltg~~~~~~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~~  320 (458)
T 3rp9_A          243 HVVTRWYRAPELILLQ--ENYTEAIDVWSIGCIFAELLNMIKENVAYHADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGN  320 (458)
T ss_dssp             --CCCTTCCHHHHTTC--CCCCTHHHHHHHHHHHHHHHTTSTTTCSSGGGCCCSCC--------------------CHHH
T ss_pred             CcccccccChHHhhCC--CCCCcHhHHHHHHHHHHHHHHhccccccccccccccCCCCccccccccccccccccccccCC
Confidence            3678999999986432  245689999999999999998           5666654321                    


Q ss_pred             hhhhHHHHh----------------------hcc-------ccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581        100 MEVGMKVAL----------------------EGL-------RITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus       100 ~~~~~~~~~----------------------~~~-------~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      ......+..                      ...       ........+..+.+++.+||+.||++|||++++++
T Consensus       321 ~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~t~~e~L~  396 (458)
T 3rp9_A          321 RDQLNVIFNILGTPSEEDIEALEKEDAKRYIRIFPKREGTDLAERFPASSADAIHLLKRMLVFNPNKRITINECLA  396 (458)
T ss_dssp             HHHHHHHHHHHCCCCHHHHHTSSCHHHHHHHTTSCCCCCCCGGGGSTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             HHHHHHHHHHcCCCCHHHHhhcCCHHHHHHHHhcCCCCCCCHHHHCCCCCHHHHHHHHHHhccCccccCCHHHHhc
Confidence            011111100                      000       00012345889999999999999999999999986

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=99.94  E-value=1.6e-26  Score=157.37  Aligned_cols=139  Identities=24%  Similarity=0.338  Sum_probs=102.5

Q ss_pred             hhhHHhhhhcC-CCCCCCeeeeeeeeccccchhhccccccccccc------CCcccCCcccCccccccCC--CCCCcchh
Q psy12581          5 KIVYSFYLNSK-KSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ------RGRCYYPAWMSPEALQKKP--GDRNLEAC   75 (153)
Q Consensus         5 ~~~~~~~lh~~-~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~------~~~~~~~~~~~pe~~~~~~--~~~~~~~~   75 (153)
                      ..-++.|||++ ++.|+||.+.||+++.++.+|+.  |||.+...      ....+++.|++||.+....  ...++.++
T Consensus       133 i~~~l~~lH~~~~i~H~dlkp~Nil~~~~~~~kl~--dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~  210 (318)
T 2dyl_A          133 IVKALYYLKEKHGVIHRDVKPSNILLDERGQIKLC--DFGISGRLVDDKAKDRSAGCAAYMAPERIDPPDPTKPDYDIRA  210 (318)
T ss_dssp             HHHHHHHHHHHHCCCCCCCCGGGEEECTTSCEEEC--CCTTC--------------CCTTCCHHHHC--------CCTHH
T ss_pred             HHHHHHHHHhhCCEEeCCCCHHHEEECCCCCEEEE--ECCCchhccCCccccccCCCccccChhhcccccccccCCcccc
Confidence            34578999985 99999999999999999988888  99987432      2346889999999985321  12456789


Q ss_pred             hHHHHHHHHHHHHhCCCCCCCCCch-hhhHHHHhhccccCCC--CCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581         76 DMWSFAVLLWELATREVPFADLTPM-EVGMKVALEGLRITIP--PGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus        76 dv~s~g~~~~~~~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      |+||+|++++++++|..||...... .....+. .......+  ...+..+.+++.+||..||++||+++++++
T Consensus       211 Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  283 (318)
T 2dyl_A          211 DVWSLGISLVELATGQFPYKNCKTDFEVLTKVL-QEEPPLLPGHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLE  283 (318)
T ss_dssp             HHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHH-HSCCCCCCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred             chhhHHHHHHHHHhCCCCCCCCCccHHHHHHHh-ccCCCCCCccCCCCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence            9999999999999999999874433 3333333 22222222  457899999999999999999999999975

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=99.94  E-value=8.1e-27  Score=160.67  Aligned_cols=137  Identities=25%  Similarity=0.361  Sum_probs=104.1

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccc-c---chhhccccccccccc-------CCcccCCcccCccccccCCCCCCcc
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDED-L---TARINMADAQFSFQQ-------RGRCYYPAWMSPEALQKKPGDRNLE   73 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~-~---~~kl~~~d~g~~~~~-------~~~~~~~~~~~pe~~~~~~~~~~~~   73 (153)
                      ..-++.|||++++.|+||++.||++..+ +   .+|+.  |||++...       ...++|+.|+|||.+.+.   .++.
T Consensus       125 i~~al~~lH~~givHrDlkp~NIl~~~~~~~~~~~kl~--Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~  199 (342)
T 2qr7_A          125 ITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRIC--DFGFAKQLRAENGLLMTPCYTANFVAPEVLERQ---GYDA  199 (342)
T ss_dssp             HHHHHHHHHHTTEECSCCCGGGEEESSSSCSGGGEEEC--CCTTCEECBCTTCCBCCSSCCSSCCCHHHHHHH---HHHH
T ss_pred             HHHHHHHHHHCCcEeccCCHHHEEEecCCCCcCeEEEE--ECCCcccCcCCCCceeccCCCccccCHHHhcCC---CCCC
Confidence            3457899999999999999999997433 2   35555  99998432       234789999999998753   2457


Q ss_pred             hhhHHHHHHHHHHHHhCCCCCCCCC---chhhhHHHHhhcccc--CCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581         74 ACDMWSFAVLLWELATREVPFADLT---PMEVGMKVALEGLRI--TIPPGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus        74 ~~dv~s~g~~~~~~~~g~~p~~~~~---~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      ++|+||+|+++|++++|..||.+..   .......+.......  ..+...+..+.+++.+||..||++||++.++++
T Consensus       200 ~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~  277 (342)
T 2qr7_A          200 ACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLR  277 (342)
T ss_dssp             HHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHHHHHHHCCCCCCSTTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred             ccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHHHHHccCCcccCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence            8999999999999999999997632   223333333332222  123568999999999999999999999999874

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=99.94  E-value=9.2e-27  Score=157.31  Aligned_cols=140  Identities=21%  Similarity=0.275  Sum_probs=111.4

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc------CCcccCCcccCccccccC---CCCCCcchh
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ------RGRCYYPAWMSPEALQKK---PGDRNLEAC   75 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~------~~~~~~~~~~~pe~~~~~---~~~~~~~~~   75 (153)
                      ..-++.|||++++.|+||.+.||+++.++.+++.  |||.+...      ....+++.|++||.+...   ....++.++
T Consensus       133 i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~--dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~  210 (298)
T 1phk_A          133 LLEVICALHKLNIVHRDLKPENILLDDDMNIKLT--DFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEV  210 (298)
T ss_dssp             HHHHHHHHHHTTEECSCCSGGGEEECTTCCEEEC--CCTTCEECCTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHH
T ss_pred             HHHHHHHHHHCCcccCCCCcceEEEcCCCcEEEe--cccchhhcCCCcccccccCCccccCHHHhccccccccccCCccc
Confidence            3457899999999999999999999999988888  99988432      234688899999987521   122456799


Q ss_pred             hHHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCC--CCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581         76 DMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIP--PGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus        76 dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      |+||+|++++++++|..||...........+.........+  ...+..+.+++.+||+.||++|||+.++++
T Consensus       211 Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  283 (298)
T 1phk_A          211 DMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA  283 (298)
T ss_dssp             HHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred             ccHhHHHHHHHHHHCCCCCcCccHHHHHHHHhcCCcccCcccccccCHHHHHHHHHHccCCcccCCCHHHHHh
Confidence            99999999999999999998876665555544443333222  357889999999999999999999999875

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=99.94  E-value=1.4e-26  Score=160.40  Aligned_cols=138  Identities=14%  Similarity=0.094  Sum_probs=103.8

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc------CCcccCCcccCccccccCCCCCCcchhhHH
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ------RGRCYYPAWMSPEALQKKPGDRNLEACDMW   78 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~------~~~~~~~~~~~pe~~~~~~~~~~~~~~dv~   78 (153)
                      ..-++.|||++++.|+||.+.||+++.++.+||.  |||.+...      ....+++.|++||.+.+.  ..++.++|+|
T Consensus       143 i~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~--Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~--~~~~~~~Diw  218 (362)
T 3pg1_A          143 ILLGLHVLHEAGVVHRDLHPGNILLADNNDITIC--DFNLAREDTADANKTHYVTHRWYRAPELVMQF--KGFTKLVDMW  218 (362)
T ss_dssp             HHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEEC--CTTC---------------CGGGCCHHHHTTC--TTCCTHHHHH
T ss_pred             HHHHHHHHHHCcCEecCCChHHEEEcCCCCEEEE--ecCcccccccccccceecccceecCcHHhcCC--CCCCcHhHHH
Confidence            3457899999999999999999999999988888  99998432      234678899999998752  2356899999


Q ss_pred             HHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccc----------------------c--------CCCCCCCHHHHHHHH
Q psy12581         79 SFAVLLWELATREVPFADLTPMEVGMKVALEGLR----------------------I--------TIPPGISSHLSKLIR  128 (153)
Q Consensus        79 s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~----------------------~--------~~~~~~~~~~~~l~~  128 (153)
                      |+|++++++++|+.||.+.........+......                      .        ..+...++.+.+++.
T Consensus       219 slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  298 (362)
T 3pg1_A          219 SAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIA  298 (362)
T ss_dssp             HHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHH
T ss_pred             hHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHH
Confidence            9999999999999999886655544433221000                      0        012345788999999


Q ss_pred             HHhcCCCCCCCCHHHHHH
Q psy12581        129 ICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus       129 ~cl~~~p~~Rps~~~~l~  146 (153)
                      +||+.||++|||+.++++
T Consensus       299 ~~L~~dP~~Rpt~~ell~  316 (362)
T 3pg1_A          299 KMLEFNPQRRISTEQALR  316 (362)
T ss_dssp             HHTCSSGGGSCCHHHHHT
T ss_pred             HHhcCChhhCCCHHHHHc
Confidence            999999999999999985

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=99.93  E-value=1.3e-26  Score=162.84  Aligned_cols=138  Identities=17%  Similarity=0.058  Sum_probs=99.8

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeee----ccccchhhccccccccccc----------CCcccCCcccCccccccCCCCC
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQI----DEDLTARINMADAQFSFQQ----------RGRCYYPAWMSPEALQKKPGDR   70 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~----~~~~~~kl~~~d~g~~~~~----------~~~~~~~~~~~pe~~~~~~~~~   70 (153)
                      ..-++.|||+++|.|+||++.||++    +.++.+||.  |||++...          ....||+.|+|||.+.+..  .
T Consensus       137 i~~al~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kl~--Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~  212 (405)
T 3rgf_A          137 ILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIA--DMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGAR--H  212 (405)
T ss_dssp             HHHHHHHHHHTTCCCCCCCGGGEEECCSSTTTTCEEEC--CTTCCC----------------CCCTTCCHHHHTTCC--S
T ss_pred             HHHHHHHHHhCCEeCCCcCHHHeEEecCCCCCCcEEEE--ECCCceecCCCCcccccCCCceecCcccCchhhcCCC--c
Confidence            3457899999999999999999999    666777777  99998432          2346799999999987532  3


Q ss_pred             CcchhhHHHHHHHHHHHHhCCCCCCCCCch---------hhhHHHHhhcccc----------------------------
Q psy12581         71 NLEACDMWSFAVLLWELATREVPFADLTPM---------EVGMKVALEGLRI----------------------------  113 (153)
Q Consensus        71 ~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~---------~~~~~~~~~~~~~----------------------------  113 (153)
                      ++.++|+||+|+++|++++|..||.+....         .....+......+                            
T Consensus       213 ~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  292 (405)
T 3rgf_A          213 YTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTN  292 (405)
T ss_dssp             CCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCHHHHHHHHHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTT
T ss_pred             ccchhhhHHHHHHHHHHHhCCCCCCCccccccccccchHHHHHHHHHhhCCCChhhcchhhcCcchhhhhhhccccCCCc
Confidence            568999999999999999999999754331         1111111100000                            


Q ss_pred             --------CCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581        114 --------TIPPGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus       114 --------~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                              ......+..+.+++.+||+.||++|||++++++
T Consensus       293 ~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L~  333 (405)
T 3rgf_A          293 CSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQ  333 (405)
T ss_dssp             CCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             chhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence                    001112667899999999999999999999985

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=99.93  E-value=6.2e-27  Score=160.47  Aligned_cols=138  Identities=19%  Similarity=0.226  Sum_probs=106.2

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc-------CCcccCCcccCccccccCCCCCCcchhhH
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ-------RGRCYYPAWMSPEALQKKPGDRNLEACDM   77 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~-------~~~~~~~~~~~pe~~~~~~~~~~~~~~dv   77 (153)
                      ..-++.|||++++.|+||.+.||+++.++.+||.  |||.+...       ....+++.|++||.+.+.  ..++.++|+
T Consensus       133 i~~~l~~LH~~~ivH~dlkp~Nil~~~~~~~kl~--Dfg~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~--~~~~~~~Di  208 (331)
T 4aaa_A          133 IINGIGFCHSHNIIHRDIKPENILVSQSGVVKLC--DFGFARTLAAPGEVYDDEVATRWYRAPELLVGD--VKYGKAVDV  208 (331)
T ss_dssp             HHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEEC--CCTTC------------CCCCCTTCCHHHHTTC--TTCCTHHHH
T ss_pred             HHHHHHHHHHCCEEccCcChheEEEcCCCcEEEE--eCCCceeecCCccccCCCcCCccccCcccccCC--CCcchHHHH
Confidence            3457899999999999999999999999988888  99988432       234688999999998753  234589999


Q ss_pred             HHHHHHHHHHHhCCCCCCCCCchhhhHHHHhh-------------------ccccC----------CCCCCCHHHHHHHH
Q psy12581         78 WSFAVLLWELATREVPFADLTPMEVGMKVALE-------------------GLRIT----------IPPGISSHLSKLIR  128 (153)
Q Consensus        78 ~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~-------------------~~~~~----------~~~~~~~~~~~l~~  128 (153)
                      ||+|+++|++++|..||.+.........+...                   +...+          .....+..+.+++.
T Consensus       209 ~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~  288 (331)
T 4aaa_A          209 WAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAK  288 (331)
T ss_dssp             HHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCGGGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHH
T ss_pred             HHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhccccccccCccccccchhhhcccchhHHHHHHHH
Confidence            99999999999999999887655544333211                   00000          01246889999999


Q ss_pred             HHhcCCCCCCCCHHHHHH
Q psy12581        129 ICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus       129 ~cl~~~p~~Rps~~~~l~  146 (153)
                      +||+.||++|||+.++++
T Consensus       289 ~~L~~dP~~Rpt~~ell~  306 (331)
T 4aaa_A          289 KCLHIDPDKRPFCAELLH  306 (331)
T ss_dssp             HHTCSSGGGSCCGGGGGG
T ss_pred             HHhccCcccCCCHHHHhc
Confidence            999999999999999874

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=99.93  E-value=1.5e-26  Score=159.62  Aligned_cols=138  Identities=16%  Similarity=0.075  Sum_probs=106.8

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccccC-----------------CcccCCcccCccccccCC
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQR-----------------GRCYYPAWMSPEALQKKP   67 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~-----------------~~~~~~~~~~pe~~~~~~   67 (153)
                      ..-++.|||++++.|+||.+.||+++.++.+|+.  |||.+....                 ...|++.|++||.+... 
T Consensus       121 i~~~L~~LH~~~ivH~Dlkp~Nil~~~~~~~kl~--Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-  197 (353)
T 2b9h_A          121 TLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVC--DFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTS-  197 (353)
T ss_dssp             HHHHHHHHHHTTEECSCCCGGGEEECTTCCEEEC--CCTTCEECC----------------CCCCCCGGGCCHHHHHSC-
T ss_pred             HHHHHHHHHHCCeecCCCCHHHeEEcCCCcEEEE--ecccccccccccccccCccccccchhhccccccccCCeeeccC-
Confidence            3457899999999999999999999999988888  999984321                 23578899999987542 


Q ss_pred             CCCCcchhhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccc----------------------c--------CCCC
Q psy12581         68 GDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLR----------------------I--------TIPP  117 (153)
Q Consensus        68 ~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~----------------------~--------~~~~  117 (153)
                       ..++.++|+||+|++++++++|..||.+.........+......                      .        ....
T Consensus       198 -~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  276 (353)
T 2b9h_A          198 -AKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFP  276 (353)
T ss_dssp             -CCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHST
T ss_pred             -CCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCchhccccccccchhhHHhhcccCCCCcchhhhcc
Confidence             24568999999999999999999999876644433222110000                      0        0123


Q ss_pred             CCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581        118 GISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus       118 ~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      ..+..+.+++.+||+.||++|||+.++++
T Consensus       277 ~~~~~~~~li~~~L~~dP~~Rpt~~ell~  305 (353)
T 2b9h_A          277 RVNPKGIDLLQRMLVFDPAKRITAKEALE  305 (353)
T ss_dssp             TSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             cCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence            57889999999999999999999999985

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=99.93  E-value=8.5e-27  Score=159.03  Aligned_cols=144  Identities=15%  Similarity=0.145  Sum_probs=105.8

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeee----ccccchhhccccccccccc------CCcccCCcccCccccccC-----CCC
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQI----DEDLTARINMADAQFSFQQ------RGRCYYPAWMSPEALQKK-----PGD   69 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~----~~~~~~kl~~~d~g~~~~~------~~~~~~~~~~~pe~~~~~-----~~~   69 (153)
                      ..-++.|||++++.|+||++.||++    +.++.+||.  |||++...      ....+++.|++||.+...     ...
T Consensus       121 i~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~--Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~  198 (319)
T 4euu_A          121 VVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLT--DFGAARELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQK  198 (319)
T ss_dssp             HHHHHHHHHHTTEECSCCSGGGEEEEECTTSCEEEEEC--CCTTCEECCTTCCBCCCCSCGGGCCHHHHHHHTSCCCCCC
T ss_pred             HHHHHHHHHHCCEecCCCCHHHEEEeccCCCCceEEEc--cCCCceecCCCCceeecccCCCccCHHHhhhccccccccC
Confidence            3457899999999999999999998    777777777  99998432      234688999999987521     012


Q ss_pred             CCcchhhHHHHHHHHHHHHhCCCCCCCCCchh----hhHHHHhhccc-------------------cCC----CCCCCHH
Q psy12581         70 RNLEACDMWSFAVLLWELATREVPFADLTPME----VGMKVALEGLR-------------------ITI----PPGISSH  122 (153)
Q Consensus        70 ~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~----~~~~~~~~~~~-------------------~~~----~~~~~~~  122 (153)
                      .++.++|+||+|+++|++++|..||.......    ....+......                   .+.    +...+..
T Consensus       199 ~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  278 (319)
T 4euu_A          199 KYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVL  278 (319)
T ss_dssp             CBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHHHCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHH
T ss_pred             CCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhcCCCcccchhhhcccCCccccCccCCcccccchhHHHH
Confidence            45688999999999999999999996543322    22222222110                   011    1123457


Q ss_pred             HHHHHHHHhcCCCCCCCCHHHHHHHHhh
Q psy12581        123 LSKLIRICMNEDPGKRPTFDMVLPILDK  150 (153)
Q Consensus       123 ~~~l~~~cl~~~p~~Rps~~~~l~~L~~  150 (153)
                      +.+++.+||+.||++|||++++++..++
T Consensus       279 l~~ll~~~L~~dP~~R~s~~ell~h~~d  306 (319)
T 4euu_A          279 LTPVLANILEADQEKCWGFDQFFAETSD  306 (319)
T ss_dssp             HHHHHHHHSCCCTTTSCCHHHHHHHHHH
T ss_pred             hHHHHHHhccCChhhhccHHHhhhccHH
Confidence            8899999999999999999999988764

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=99.93  E-value=1.5e-26  Score=157.52  Aligned_cols=138  Identities=19%  Similarity=0.211  Sum_probs=102.2

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccc---hhhccccccccccc--------------CCcccCCcccCccccccCC
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLT---ARINMADAQFSFQQ--------------RGRCYYPAWMSPEALQKKP   67 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~---~kl~~~d~g~~~~~--------------~~~~~~~~~~~pe~~~~~~   67 (153)
                      ..-++.|||++++.|+||++.||+++.++.   +|+.  |||++...              ....|++.|++||.+....
T Consensus       120 i~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~--Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~  197 (316)
T 2ac3_A          120 VASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKIC--DFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFS  197 (316)
T ss_dssp             HHHHHHHHHHTTCCCCCCCGGGEEESCSSSSCSEEEC--CTTCCC-------------------CCSGGGCCHHHHHHTS
T ss_pred             HHHHHHHHHhCCceeCCCCHHHEEEccCCCcCceEEE--EccCccccccCCccccccccccccccCCcCccChHHhhccc
Confidence            345789999999999999999999998775   5666  99987432              1235889999999986411


Q ss_pred             C--CCCcchhhHHHHHHHHHHHHhCCCCCCCCCchh---------------hhHHHHhhccccCCC----CCCCHHHHHH
Q psy12581         68 G--DRNLEACDMWSFAVLLWELATREVPFADLTPME---------------VGMKVALEGLRITIP----PGISSHLSKL  126 (153)
Q Consensus        68 ~--~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~---------------~~~~~~~~~~~~~~~----~~~~~~~~~l  126 (153)
                      .  ..++.++|+||+|+++|++++|..||.+.....               ....+....  ...+    ...+..+.++
T Consensus       198 ~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~--~~~~~~~~~~~~~~~~~l  275 (316)
T 2ac3_A          198 EEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEGK--YEFPDKDWAHISCAAKDL  275 (316)
T ss_dssp             HHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHHHHHHHHHHHCC--CCCCHHHHTTSCHHHHHH
T ss_pred             ccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchhHHHHHHHHHhccC--cccCchhcccCCHHHHHH
Confidence            0  123478999999999999999999997654221               112222221  2222    3578899999


Q ss_pred             HHHHhcCCCCCCCCHHHHHH
Q psy12581        127 IRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus       127 ~~~cl~~~p~~Rps~~~~l~  146 (153)
                      +.+||+.||++|||+.++++
T Consensus       276 i~~~L~~dP~~Rps~~e~l~  295 (316)
T 2ac3_A          276 ISKLLVRDAKQRLSAAQVLQ  295 (316)
T ss_dssp             HHHHSCSSTTTSCCHHHHHH
T ss_pred             HHHHhhCChhhCCCHHHHhc
Confidence            99999999999999999986

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=99.93  E-value=1.4e-26  Score=158.65  Aligned_cols=142  Identities=17%  Similarity=0.110  Sum_probs=105.2

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeecc-------------------ccchhhccccccccccc----CCcccCCcccCcc
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDE-------------------DLTARINMADAQFSFQQ----RGRCYYPAWMSPE   61 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~-------------------~~~~kl~~~d~g~~~~~----~~~~~~~~~~~pe   61 (153)
                      ..-++.|||++++.|+||++.||+++.                   ++.+|+.  |||.+...    ....+|+.|++||
T Consensus       127 i~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~~~~~~~~~~kl~--Dfg~~~~~~~~~~~~~gt~~y~aPE  204 (339)
T 1z57_A          127 ICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVV--DFGSATYDDEHHSTLVSTRHYRAPE  204 (339)
T ss_dssp             HHHHHHHHHHTTEECCCCCGGGEEESCCCEEEEEC----CEEEEESCCCEEEC--CCSSCEETTSCCCSSCSCGGGCCHH
T ss_pred             HHHHHHHHHHCCCcCCCCCHHHEEEeccccccccCCccccccccccCCCceEe--eCcccccCccccccccCCccccChH
Confidence            345789999999999999999999987                   4445666  99998443    2347889999999


Q ss_pred             ccccCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccc-----------------------------
Q psy12581         62 ALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLR-----------------------------  112 (153)
Q Consensus        62 ~~~~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~-----------------------------  112 (153)
                      .+.+.   .++.++|+||+|++++++++|..||...........+......                             
T Consensus       205 ~~~~~---~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  281 (339)
T 1z57_A          205 VILAL---GWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAG  281 (339)
T ss_dssp             HHTTS---CCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHHHHHHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHH
T ss_pred             HhhCC---CCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhccchhHHhhcccccccccccc
Confidence            98764   3558999999999999999999999876654433222110000                             


Q ss_pred             -------------cCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHH--HHhhh
Q psy12581        113 -------------ITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLP--ILDKM  151 (153)
Q Consensus       113 -------------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~--~L~~~  151 (153)
                                   ...+...+..+.+++.+||+.||++|||+.++++  .|+.+
T Consensus       282 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~f~~~  335 (339)
T 1z57_A          282 RYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREALKHPFFDLL  335 (339)
T ss_dssp             HHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTTSGGGGGG
T ss_pred             chhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccccCHHHHhcCHHHHHH
Confidence                         0011123467889999999999999999999984  34444

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=99.93  E-value=6.4e-26  Score=160.51  Aligned_cols=138  Identities=14%  Similarity=0.158  Sum_probs=99.9

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc-----------------------------CCcccCC
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ-----------------------------RGRCYYP   55 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~-----------------------------~~~~~~~   55 (153)
                      ..-++.|||++++.|+||++.||+++.++.+||.  |||++...                             ...++|+
T Consensus       138 il~aL~~LH~~givHrDlkp~NILl~~~~~~kL~--DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~  215 (432)
T 3n9x_A          138 LLLGENFIHESGIIHRDLKPANCLLNQDCSVKVC--DFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTR  215 (432)
T ss_dssp             HHHHHHHHHHTTEECCCCCGGGEEECTTCCEEEC--CCTTCEEC-------------------------------CCCCC
T ss_pred             HHHHHHHHHHCCCCCCCCCHHHeEECCCCCEEEc--cCCCcccccccccccccccccccccccccccchhccccCCCCCc
Confidence            3457899999999999999999999999998888  99998432                             3447899


Q ss_pred             cccCccccccCCCCCCcchhhHHHHHHHHHHHHhCCCCC-----------CCCCc-----------------hhhhHHHH
Q psy12581         56 AWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPF-----------ADLTP-----------------MEVGMKVA  107 (153)
Q Consensus        56 ~~~~pe~~~~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~-----------~~~~~-----------------~~~~~~~~  107 (153)
                      .|+|||.+...  ..++.++|+||+|++++++++|..|+           .+...                 ......+.
T Consensus       216 ~Y~APE~~~~~--~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~ql~~i~  293 (432)
T 3n9x_A          216 WYRAPELILLQ--ENYTKSIDIWSTGCIFAELLNMLQSHINDPTNRFPLFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIF  293 (432)
T ss_dssp             TTCCHHHHTTC--SCCCTHHHHHHHHHHHHHHHTTCTTTCSSGGGCCCSCCCSCSCC----------CHHHHHHHHHHHH
T ss_pred             cccCHHHHhcC--CCCCcccccchHHHHHHHHHhcccccccccccccccCCCccccccCcccccccccccchHHHHHHHH
Confidence            99999986432  24568999999999999999854443           22210                 01111110


Q ss_pred             h----------------------hccccCC-------CCCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581        108 L----------------------EGLRITI-------PPGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus       108 ~----------------------~~~~~~~-------~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      .                      .......       ....++.+.+++.+||+.||++|||++++++
T Consensus       294 ~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~  361 (432)
T 3n9x_A          294 NIIGTPTEDDLKNINKPEVIKYIKLFPHRKPINLKQKYPSISDDGINLLESMLKFNPNKRITIDQALD  361 (432)
T ss_dssp             HHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             HhcCCCCHHHHHhccCHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence            0                      0000000       1347899999999999999999999999985

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=99.93  E-value=1.7e-26  Score=159.20  Aligned_cols=137  Identities=16%  Similarity=0.103  Sum_probs=103.0

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeee-------------------ccccchhhccccccccccc----CCcccCCcccCcc
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQI-------------------DEDLTARINMADAQFSFQQ----RGRCYYPAWMSPE   61 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~-------------------~~~~~~kl~~~d~g~~~~~----~~~~~~~~~~~pe   61 (153)
                      ..-++.|||++++.|+||++.||++                   +.++.+|+.  |||.+...    ....+|+.|++||
T Consensus       132 i~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~kl~--Dfg~~~~~~~~~~~~~gt~~y~aPE  209 (355)
T 2eu9_A          132 LCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVA--DFGSATFDHEHHTTIVATRHYRPPE  209 (355)
T ss_dssp             HHHHHHHHHTTTEECCCCCGGGEEESCCCEEEEECCC-CCCEEEESCCCEEEC--CCTTCEETTSCCCSSCSCGGGCCHH
T ss_pred             HHHHHHHHHHCCcccCCCCHHHEEEecccccccccccccccccccCCCcEEEe--ecCccccccccccCCcCCCcccCCe
Confidence            4557899999999999999999999                   455666776  99998433    3347889999999


Q ss_pred             ccccCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhcccc----------------------------
Q psy12581         62 ALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRI----------------------------  113 (153)
Q Consensus        62 ~~~~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~----------------------------  113 (153)
                      .+.+.   .++.++|+||+|+++|++++|..||.+.........+.......                            
T Consensus       210 ~~~~~---~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  286 (355)
T 2eu9_A          210 VILEL---GWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDG  286 (355)
T ss_dssp             HHTTC---CCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHH
T ss_pred             eeecC---CCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCcHHHhhhccchhhhcccccccccccchh
Confidence            99764   45589999999999999999999998766544332221100000                            


Q ss_pred             --------------CCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581        114 --------------TIPPGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus       114 --------------~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                                    ......+..+.+++.+||+.||++|||+.++++
T Consensus       287 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~  333 (355)
T 2eu9_A          287 RYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALL  333 (355)
T ss_dssp             HHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred             ccccccCCcccccccccchhHHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence                          001112357889999999999999999999974

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=99.93  E-value=6e-27  Score=160.32  Aligned_cols=137  Identities=19%  Similarity=0.277  Sum_probs=87.1

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeecccc---chhhccccccccccc-------CCcccCCcccCccccccCCCCCCcch
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDL---TARINMADAQFSFQQ-------RGRCYYPAWMSPEALQKKPGDRNLEA   74 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~---~~kl~~~d~g~~~~~-------~~~~~~~~~~~pe~~~~~~~~~~~~~   74 (153)
                      ..-++.|||++++.|+||.+.||+++.++   .+|+.  |||++...       ...++|+.|++||.+.+.   .++.+
T Consensus       115 i~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~--Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~---~~~~~  189 (325)
T 3kn6_A          115 LVSAVSHMHDVGVVHRDLKPENLLFTDENDNLEIKII--DFGFARLKPPDNQPLKTPCFTLHYAAPELLNQN---GYDES  189 (325)
T ss_dssp             HHHHHHHHHHTTEECCCCCGGGEEEEC----CEEEEC--CCTTCEECCC----------------------C---CCCHH
T ss_pred             HHHHHHHHHHCCCeecCCCHHHEEEecCCCcccEEEe--ccccceecCCCCCcccccCCCcCccCHHHhcCC---CCCCc
Confidence            34578999999999999999999998765   56666  99998432       234678999999998764   45589


Q ss_pred             hhHHHHHHHHHHHHhCCCCCCCCCch-------hhhHHHHhhccccCC--CCCCCHHHHHHHHHHhcCCCCCCCCHHHHH
Q psy12581         75 CDMWSFAVLLWELATREVPFADLTPM-------EVGMKVALEGLRITI--PPGISSHLSKLIRICMNEDPGKRPTFDMVL  145 (153)
Q Consensus        75 ~dv~s~g~~~~~~~~g~~p~~~~~~~-------~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l  145 (153)
                      +|+||+|++++++++|..||.+....       .....+.........  ....+..+.+++.+||+.||++|||+++++
T Consensus       190 ~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell  269 (325)
T 3kn6_A          190 CDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLR  269 (325)
T ss_dssp             HHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTTTCCCCCSHHHHTSCHHHHHHHHHHHCCCTTTCCCTTTST
T ss_pred             cchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHcCCCCCCcccccCCCHHHHHHHHHHCCCChhHCCCHHHHh
Confidence            99999999999999999999764321       222222222111111  124789999999999999999999999876


Q ss_pred             H
Q psy12581        146 P  146 (153)
Q Consensus       146 ~  146 (153)
                      +
T Consensus       270 ~  270 (325)
T 3kn6_A          270 Y  270 (325)
T ss_dssp             T
T ss_pred             c
Confidence            3

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=99.93  E-value=2.7e-26  Score=154.43  Aligned_cols=136  Identities=21%  Similarity=0.256  Sum_probs=107.8

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeecccc---chhhcccccccccccC------CcccCCcccCccccccCCCCCCcchh
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDL---TARINMADAQFSFQQR------GRCYYPAWMSPEALQKKPGDRNLEAC   75 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~---~~kl~~~d~g~~~~~~------~~~~~~~~~~pe~~~~~~~~~~~~~~   75 (153)
                      ..-++.|||++++.|+||.+.||+++.++   .+|+.  |||.+....      ...+++.|++||.+.+    .++.++
T Consensus       130 i~~~l~~LH~~~i~H~dl~p~NIlv~~~~~~~~~kL~--Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~----~~~~~~  203 (287)
T 2wei_A          130 VFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKII--DFGLSTCFQQNTKMKDRIGTAYYIAPEVLRG----TYDEKC  203 (287)
T ss_dssp             HHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEEC--STTGGGTBCCCSSCSCHHHHHTTCCHHHHTT----CCCTHH
T ss_pred             HHHHHHHHHHCCeeccCCChhhEEEecCCCcccEEEe--ccCcceeecCCCccccccCcccccChHHhcC----CCCCch
Confidence            34578999999999999999999997654   45665  999884332      2356788999999875    356899


Q ss_pred             hHHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCC--CCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581         76 DMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIP--PGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus        76 dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      |+||+|++++++++|..||.+.........+.........+  ...+..+.+++.+||..||++|||+.++++
T Consensus       204 Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~  276 (287)
T 2wei_A          204 DVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLE  276 (287)
T ss_dssp             HHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCSGGGTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             hhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCchhhhhcCHHHHHHHHHHcccChhhCcCHHHHhc
Confidence            99999999999999999998877665555444433332222  467899999999999999999999999986

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=99.93  E-value=1.3e-26  Score=161.77  Aligned_cols=137  Identities=21%  Similarity=0.124  Sum_probs=103.0

Q ss_pred             hhhHHhhhh--cCCCCCCCeeeeeeeecc--ccchhhccccccccccc----CCcccCCcccCccccccCCCCCCcchhh
Q psy12581          5 KIVYSFYLN--SKKSKTSNAFLFCCQIDE--DLTARINMADAQFSFQQ----RGRCYYPAWMSPEALQKKPGDRNLEACD   76 (153)
Q Consensus         5 ~~~~~~~lh--~~~i~~~ni~~~~~~~~~--~~~~kl~~~d~g~~~~~----~~~~~~~~~~~pe~~~~~~~~~~~~~~d   76 (153)
                      ..-++.|||  +.+|.|+||++.||+++.  ++.+||.  |||++...    ....+|+.|+|||.+.+.   .++.++|
T Consensus       166 i~~al~~lH~~~~~ivHrDlkp~NIll~~~~~~~~kL~--DFG~a~~~~~~~~~~~~t~~y~aPE~~~~~---~~~~~~D  240 (382)
T 2vx3_A          166 MCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIV--DFGSSCQLGQRIYQYIQSRFYRSPEVLLGM---PYDLAID  240 (382)
T ss_dssp             HHHHHHHHTSTTTCEECCCCSGGGEEESSTTSCCEEEC--CCTTCEETTCCCCSSCSCGGGCCHHHHTTC---CCCTHHH
T ss_pred             HHHHHHHhccCCCCEEcCCCCcccEEEecCCCCcEEEE--eccCceecccccccccCCccccChHHHcCC---CCCcHHH
Confidence            345788999  478999999999999954  5666776  99998543    345788999999999864   3558999


Q ss_pred             HHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccC----------------CC------------------CC----
Q psy12581         77 MWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRIT----------------IP------------------PG----  118 (153)
Q Consensus        77 v~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~----------------~~------------------~~----  118 (153)
                      +||+|++++++++|+.||.+.........+......++                .+                  ..    
T Consensus       241 iwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  320 (382)
T 2vx3_A          241 MWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPAHILDQAPKARKFFEKLPDGTWNLKKTKDGKREYKPPGTRKL  320 (382)
T ss_dssp             HHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTCTTHHHHEEECTTSCEEECCCCTTCCCSCCTTCSCH
T ss_pred             HHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhHHHHHHHHhccccccccccccccccccCCcchhhH
Confidence            99999999999999999988766555444332100000                00                  00    


Q ss_pred             ------------------------CCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581        119 ------------------------ISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus       119 ------------------------~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                                              ....+.+++.+||+.||++|||++++++
T Consensus       321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~Rpta~e~L~  372 (382)
T 2vx3_A          321 HNILGVETGGPGGRRAGESGHTVADYLKFKDLILRMLDYDPKTRIQPYYALQ  372 (382)
T ss_dssp             HHHHTTTTTSGGGTTTTCTTCCHHHHHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred             HHHhhccccCCCccccccccccchhhHHHHHHHHHhcCCChhhCCCHHHHhc
Confidence                                    0136889999999999999999999875

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=99.93  E-value=3.9e-26  Score=154.43  Aligned_cols=138  Identities=25%  Similarity=0.346  Sum_probs=106.9

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc------------CCcccCCcccCccccccCCCCCCc
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ------------RGRCYYPAWMSPEALQKKPGDRNL   72 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~------------~~~~~~~~~~~pe~~~~~~~~~~~   72 (153)
                      ..-++.|||++++.|+||.+.||+++.++.+++.  |||.+...            ....+++.|++||.+.+..  .++
T Consensus       130 i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~--dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~--~~~  205 (303)
T 2vwi_A          130 VLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIA--DFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVR--GYD  205 (303)
T ss_dssp             HHHHHHHHHHTTCCCCCCSGGGEEECTTCCEEEC--CCHHHHHCC---------------CCCTTCCHHHHHHHH--CCC
T ss_pred             HHHHHHHHHhCCCCCCCCChhhEEEcCCCCEEEE--eccchheeccCCCccchhhhcccCCCccccCHHHhcccc--CCC
Confidence            3457899999999999999999999999988888  99987322            2236888999999986421  245


Q ss_pred             chhhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccc--------cCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHH
Q psy12581         73 EACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLR--------ITIPPGISSHLSKLIRICMNEDPGKRPTFDMV  144 (153)
Q Consensus        73 ~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~  144 (153)
                      .++|+||+|++++++++|..||..................        .......+..+.+++.+||+.||++||++.++
T Consensus       206 ~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l  285 (303)
T 2vwi_A          206 FKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAEL  285 (303)
T ss_dssp             THHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHTSSCCCTTC-----CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHH
T ss_pred             chhhHHHHHHHHHHHHhCCCCCccCchhhHHHHHhccCCCccccccccchhhhhhhHHHHHHHHHHccCChhhCcCHHHH
Confidence            7899999999999999999999887665544333322111        11234578899999999999999999999999


Q ss_pred             HH
Q psy12581        145 LP  146 (153)
Q Consensus       145 l~  146 (153)
                      ++
T Consensus       286 l~  287 (303)
T 2vwi_A          286 LR  287 (303)
T ss_dssp             HT
T ss_pred             hh
Confidence            85

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=99.93  E-value=1.8e-26  Score=154.86  Aligned_cols=142  Identities=18%  Similarity=0.205  Sum_probs=109.6

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeecccc----chhhccccccccccc------CCcccCCcccCccccccCCCCCCcch
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDL----TARINMADAQFSFQQ------RGRCYYPAWMSPEALQKKPGDRNLEA   74 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~----~~kl~~~d~g~~~~~------~~~~~~~~~~~pe~~~~~~~~~~~~~   74 (153)
                      ..-++.|||++++.|+||.+.||+++.++    .+++.  |||.+...      ....+++.|++||.+.+.   .++.+
T Consensus       117 i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~~~~kl~--dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~~~~  191 (283)
T 3bhy_A          117 ILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLI--DFGIAHKIEAGNEFKNIFGTPEFVAPEIVNYE---PLGLE  191 (283)
T ss_dssp             HHHHHHHHHHTTEECSCCSGGGEEESCSSSSSCCEEEC--CCTTCEECC--------CCCGGGCCHHHHTTC---CCCTH
T ss_pred             HHHHHHHHHhCCccCCCCChHHEEEecCCCCCCceEEE--ecccceeccCCCcccccCCCcCccCcceecCC---CCCcc
Confidence            44578999999999999999999998877    56666  99988443      233688899999998754   35589


Q ss_pred             hhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhcccc--CCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHH--HHhh
Q psy12581         75 CDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRI--TIPPGISSHLSKLIRICMNEDPGKRPTFDMVLP--ILDK  150 (153)
Q Consensus        75 ~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~--~L~~  150 (153)
                      +|+||+|++++++++|..||.+.........+.......  ..+...+..+.+++.+||..||++|||+.++++  .++.
T Consensus       192 ~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~  271 (283)
T 3bhy_A          192 ADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKA  271 (283)
T ss_dssp             HHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCCCCHHHHTTCCHHHHHHHHTTSCSSGGGSCCHHHHHHCHHHHH
T ss_pred             hhhhhHHHHHHHHHHCCCCCCCcchHHHHHHhHhcccCCcchhcccCCHHHHHHHHHHccCCHhHCcCHHHHHhCHHHHH
Confidence            999999999999999999998876655544433222211  122457889999999999999999999999986  4444


Q ss_pred             h
Q psy12581        151 M  151 (153)
Q Consensus       151 ~  151 (153)
                      +
T Consensus       272 ~  272 (283)
T 3bhy_A          272 I  272 (283)
T ss_dssp             H
T ss_pred             H
Confidence            3

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=99.93  E-value=4.4e-26  Score=153.03  Aligned_cols=134  Identities=16%  Similarity=0.120  Sum_probs=103.3

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeecccc-------------------chhhccccccccccc---CCcccCCcccCccc
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDL-------------------TARINMADAQFSFQQ---RGRCYYPAWMSPEA   62 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~-------------------~~kl~~~d~g~~~~~---~~~~~~~~~~~pe~   62 (153)
                      ..-++.|||++++.|+||++.||+++.++                   .+++.  |||.+...   ....+++.|++||.
T Consensus       124 i~~al~~lH~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~kl~--Dfg~~~~~~~~~~~~gt~~y~aPE~  201 (289)
T 1x8b_A          124 VGRGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIG--DLGHVTRISSPQVEEGDSRFLANEV  201 (289)
T ss_dssp             HHHHHHHHHHTTEECSCCSGGGEEEC--------------------CCCEEEC--CCTTCEETTCSCCCCCCGGGCCHHH
T ss_pred             HHHHHHHHHhCCEeecCCCHHHEEEcCCCCCcccccccccccccCCceEEEEc--ccccccccCCccccCCCccccChhH
Confidence            34578999999999999999999998654                   44555  99988443   33468899999999


Q ss_pred             cccCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHH
Q psy12581         63 LQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFD  142 (153)
Q Consensus        63 ~~~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~  142 (153)
                      +.+.  ...+.++|+||+|++++++++|..++....   .. ...........+...+..+.+++.+||+.||++|||+.
T Consensus       202 ~~~~--~~~~~~~Di~slG~il~~l~~~~~~~~~~~---~~-~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~  275 (289)
T 1x8b_A          202 LQEN--YTHLPKADIFALALTVVCAAGAEPLPRNGD---QW-HEIRQGRLPRIPQVLSQEFTELLKVMIHPDPERRPSAM  275 (289)
T ss_dssp             HTTC--CTTHHHHHHHHHHHHHHHHTTCCCCCSSSH---HH-HHHHTTCCCCCSSCCCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred             hcCC--CCCCchhhHHHHHHHHHHHhcCCCCCcchh---HH-HHHHcCCCCCCCcccCHHHHHHHHHHhCCCcccCCCHH
Confidence            8753  234578999999999999999987764432   12 22234445566778899999999999999999999999


Q ss_pred             HHHH
Q psy12581        143 MVLP  146 (153)
Q Consensus       143 ~~l~  146 (153)
                      ++++
T Consensus       276 ~ll~  279 (289)
T 1x8b_A          276 ALVK  279 (289)
T ss_dssp             HHHT
T ss_pred             HHhh
Confidence            9875

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=99.93  E-value=3.3e-26  Score=157.62  Aligned_cols=136  Identities=18%  Similarity=0.234  Sum_probs=108.0

Q ss_pred             hhhHHhhhhc-CCCCCCCeeeeeeeeccccchhhccccccccccc-----CCcccCCcccCccccccCCCCCCcc-hhhH
Q psy12581          5 KIVYSFYLNS-KKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ-----RGRCYYPAWMSPEALQKKPGDRNLE-ACDM   77 (153)
Q Consensus         5 ~~~~~~~lh~-~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~-----~~~~~~~~~~~pe~~~~~~~~~~~~-~~dv   77 (153)
                      ..-++.|||+ +++.|+||.+.||+++.++.+++.  |||.+...     ....+++.|++||.+.+..  .++. ++|+
T Consensus       160 i~~~l~~lH~~~~i~H~dl~p~Nil~~~~~~~kl~--dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~--~~~~~~~Di  235 (348)
T 2pml_X          160 VLNSFSYIHNEKNICHRDVKPSNILMDKNGRVKLS--DFGESEYMVDKKIKGSRGTYEFMPPEFFSNES--SYNGAKVDI  235 (348)
T ss_dssp             HHHHHHHHHHTSCEECCCCCGGGEEECTTSCEEEC--CCTTCEECBTTEECSSCSCGGGCCGGGGSSCC--CEEHHHHHH
T ss_pred             HHHHHHHHhccCCEeecCCChHhEEEcCCCcEEEe--ccccccccccccccCCCCCcCccCchhhcCCC--CCCcchhhH
Confidence            3456799998 999999999999999999988888  99998542     3447889999999987531  2334 8999


Q ss_pred             HHHHHHHHHHHhCCCCCCCCCc-hhhhHHHHhhccccCCC-------------------CCCCHHHHHHHHHHhcCCCCC
Q psy12581         78 WSFAVLLWELATREVPFADLTP-MEVGMKVALEGLRITIP-------------------PGISSHLSKLIRICMNEDPGK  137 (153)
Q Consensus        78 ~s~g~~~~~~~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~l~~~cl~~~p~~  137 (153)
                      ||+|++++++++|..||..... ......+....  ...+                   ...+..+.+++.+||+.||++
T Consensus       236 ~slG~il~~l~~g~~pf~~~~~~~~~~~~i~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~  313 (348)
T 2pml_X          236 WSLGICLYVMFYNVVPFSLKISLVELFNNIRTKN--IEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAE  313 (348)
T ss_dssp             HHHHHHHHHHHHSSCSSCCSSCSHHHHHHHTSCC--CCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGG
T ss_pred             HHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccC--cCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhh
Confidence            9999999999999999987665 33333332222  2223                   557899999999999999999


Q ss_pred             CCCHHHHHH
Q psy12581        138 RPTFDMVLP  146 (153)
Q Consensus       138 Rps~~~~l~  146 (153)
                      |||++++++
T Consensus       314 Rps~~e~l~  322 (348)
T 2pml_X          314 RITSEDALK  322 (348)
T ss_dssp             SCCHHHHHT
T ss_pred             CCCHHHHhc
Confidence            999999985

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=99.93  E-value=9.1e-27  Score=159.33  Aligned_cols=140  Identities=19%  Similarity=0.282  Sum_probs=89.9

Q ss_pred             hhhHHhhhhcC-CCCCCCeeeeeeeeccccchhhccccccccccc------CCcccCCcccCccccccCC-CCCCcchhh
Q psy12581          5 KIVYSFYLNSK-KSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ------RGRCYYPAWMSPEALQKKP-GDRNLEACD   76 (153)
Q Consensus         5 ~~~~~~~lh~~-~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~------~~~~~~~~~~~pe~~~~~~-~~~~~~~~d   76 (153)
                      ..-++.|||++ ++.|+||.+.||+++.++.+||.  |||++...      ....+++.|++||.+.... ...++.++|
T Consensus       134 i~~~l~~lH~~~~ivH~dlkp~NIll~~~~~~kl~--Dfg~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~D  211 (327)
T 3aln_A          134 TVKALNHLKENLKIIHRDIKPSNILLDRSGNIKLC--DFGISGQLVDSIAKTRDAGCRPYMAPERIDPSASRQGYDVRSD  211 (327)
T ss_dssp             HHHHHHHHHHHHSCCCSCCCGGGEEEETTTEEEEC--CCSSSCC------------------------------CCSHHH
T ss_pred             HHHHHHHHhccCCEeECCCCHHHEEEcCCCCEEEc--cCCCceecccccccccCCCCccccCceeeccccCcCCCCchhh
Confidence            34567899998 99999999999999999988888  99988432      2236888999999984321 224568999


Q ss_pred             HHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCC----CCCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581         77 MWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITI----PPGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus        77 v~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      +||+|++++++++|..||.+.............+.....    ....+..+.+++.+||..||++|||+.++++
T Consensus       212 i~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~  285 (327)
T 3aln_A          212 VWSLGITLYELATGRFPYPKWNSVFDQLTQVVKGDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLK  285 (327)
T ss_dssp             HHHHHHHHHHHHHSCCCSSCC-------CCCCCSCCCCCCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             HHHHHHHHHHHHHCCCCCCCcchHHHHHHHHhcCCCCCCCCcccccCCHHHHHHHHHHhhCChhhCcCHHHHHh
Confidence            999999999999999999764322111111111111111    2357899999999999999999999999974

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=99.93  E-value=6e-27  Score=160.16  Aligned_cols=134  Identities=13%  Similarity=0.081  Sum_probs=100.4

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccccC-------------------CcccCCcccCcccccc
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQR-------------------GRCYYPAWMSPEALQK   65 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~-------------------~~~~~~~~~~pe~~~~   65 (153)
                      ..-++.|||++++.|+||++.||+++.++.+|+.  |||++....                   ...||+.|++||.+.+
T Consensus       173 i~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~--DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~  250 (332)
T 3qd2_B          173 IAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVG--DFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMSPEQIHG  250 (332)
T ss_dssp             HHHHHHHHHHTTEECCCCCGGGEEECTTCCEEEC--CCTTCEECSCC--------------CCCSCC-CGGGSCHHHHHC
T ss_pred             HHHHHHHHHhCCeeecCCCcccEEEeCCCCEEEe--ecCcccccccchhhccccccccccccccccCCCcCccChHHhcC
Confidence            3457899999999999999999999999988888  999984332                   2368999999999886


Q ss_pred             CCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHH
Q psy12581         66 KPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVL  145 (153)
Q Consensus        66 ~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l  145 (153)
                      .   .++.++|+||+|++++++++|..|+...   ............+..+...++.+.+++.+||+.||++|||+++++
T Consensus       251 ~---~~~~~~Di~slG~il~el~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l  324 (332)
T 3qd2_B          251 N---NYSHKVDIFSLGLILFELLYSFSTQMER---VRIITDVRNLKFPLLFTQKYPQEHMMVQDMLSPSPTERPEATDII  324 (332)
T ss_dssp             C---CCCTHHHHHHHHHHHHHHHSCCCCHHHH---HHHHHHHHTTCCCHHHHHHCHHHHHHHHHHHCSSGGGSCCHHHHH
T ss_pred             C---CCcchhhHHHHHHHHHHHHHcCCChhHH---HHHHHHhhccCCCcccccCChhHHHHHHHHccCCCCcCCCHHHHh
Confidence            4   4558999999999999999986654211   111111111111111233567889999999999999999999998


Q ss_pred             H
Q psy12581        146 P  146 (153)
Q Consensus       146 ~  146 (153)
                      +
T Consensus       325 ~  325 (332)
T 3qd2_B          325 E  325 (332)
T ss_dssp             H
T ss_pred             h
Confidence            6

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=99.93  E-value=1.2e-26  Score=162.17  Aligned_cols=139  Identities=17%  Similarity=0.116  Sum_probs=101.0

Q ss_pred             hhhHHhhhhcC-CCCCCCeeeeeeeeccccc-----------------------------------------------hh
Q psy12581          5 KIVYSFYLNSK-KSKTSNAFLFCCQIDEDLT-----------------------------------------------AR   36 (153)
Q Consensus         5 ~~~~~~~lh~~-~i~~~ni~~~~~~~~~~~~-----------------------------------------------~k   36 (153)
                      ..-++.|||++ +|.|+||++.||+++.++.                                               ..
T Consensus       155 i~~aL~~lH~~~givHrDikp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (397)
T 1wak_A          155 VLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLK  234 (397)
T ss_dssp             HHHHHHHHHHTTCEECCCCSGGGEEECCCHHHHHHHHHHHC---------------------CCTTSCCTTSGGGGGGCC
T ss_pred             HHHHHHHHHHhCCEecCCCCHHHeeEeccchhhhhhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccc
Confidence            34578999998 9999999999999997762                                               13


Q ss_pred             hccccccccccc----CCcccCCcccCccccccCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCchh------hhHHH
Q psy12581         37 INMADAQFSFQQ----RGRCYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPME------VGMKV  106 (153)
Q Consensus        37 l~~~d~g~~~~~----~~~~~~~~~~~pe~~~~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~------~~~~~  106 (153)
                      +++.|||.+...    ....+|+.|++||.+.+.   .++.++|+||+|+++|++++|..||.......      ....+
T Consensus       235 ~kl~DfG~a~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~  311 (397)
T 1wak_A          235 VKIADLGNACWVHKHFTEDIQTRQYRSLEVLIGS---GYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALI  311 (397)
T ss_dssp             EEECCGGGCEETTBCSCSCCSCGGGCCHHHHHTS---CCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHH
T ss_pred             eEeccccccccccccCccCCCCCcccCChhhcCC---CCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHH
Confidence            344499998432    345789999999999864   35589999999999999999999997644221      11111


Q ss_pred             Hhh-cc---------------------------------------ccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581        107 ALE-GL---------------------------------------RITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus       107 ~~~-~~---------------------------------------~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      ... +.                                       ....+...+..+.+++.+||+.||++|||++++++
T Consensus       312 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~  391 (397)
T 1wak_A          312 IELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLR  391 (397)
T ss_dssp             HHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCCCCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHT
T ss_pred             HHhcCCCChHHhhcccccccccCCccccccccccCCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhh
Confidence            100 00                                       00011223456889999999999999999999985

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=99.93  E-value=7.6e-27  Score=163.60  Aligned_cols=146  Identities=15%  Similarity=0.144  Sum_probs=106.9

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeee----ccccchhhccccccccccc------CCcccCCcccCccccccCCC-----C
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQI----DEDLTARINMADAQFSFQQ------RGRCYYPAWMSPEALQKKPG-----D   69 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~----~~~~~~kl~~~d~g~~~~~------~~~~~~~~~~~pe~~~~~~~-----~   69 (153)
                      ..-++.|||++++.|+||++.||++    +.++.+|+.  |||.+...      ....|++.|++||.+.....     .
T Consensus       121 i~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~--DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~  198 (396)
T 4eut_A          121 VVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLT--DFGAARELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQK  198 (396)
T ss_dssp             HHHHHHHHHHTTEECCCCCGGGEEEEECTTSCEEEEEC--CGGGCEECCCGGGSSCSSSCCTTCCHHHHHHHCC--CHHH
T ss_pred             HHHHHHHHHHCCEEECCcCHHHEEEeecCCCceeEEEe--cCCCceEccCCCccccccCCccccCHHHhhcccccccccc
Confidence            3457899999999999999999998    677777777  99998432      23468999999998754110     1


Q ss_pred             CCcchhhHHHHHHHHHHHHhCCCCCCCCCc----hhhhHHHHhhccc-------------------cCCC----CCCCHH
Q psy12581         70 RNLEACDMWSFAVLLWELATREVPFADLTP----MEVGMKVALEGLR-------------------ITIP----PGISSH  122 (153)
Q Consensus        70 ~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~----~~~~~~~~~~~~~-------------------~~~~----~~~~~~  122 (153)
                      .++.++|+||+|+++|++++|..||.....    ......+......                   .+.+    ...+..
T Consensus       199 ~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  278 (396)
T 4eut_A          199 KYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVL  278 (396)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHHSCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHH
T ss_pred             CCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhcCCCcccchhheeccCCCcccCccCCcccccchHHHhh
Confidence            245789999999999999999999965332    2222233222110                   0111    123457


Q ss_pred             HHHHHHHHhcCCCCCCCCHHHHHHHHhhhh
Q psy12581        123 LSKLIRICMNEDPGKRPTFDMVLPILDKMK  152 (153)
Q Consensus       123 ~~~l~~~cl~~~p~~Rps~~~~l~~L~~~~  152 (153)
                      +.+++.+||+.||++||++.++++.++++.
T Consensus       279 l~~ll~~~L~~dP~~R~s~~e~l~~l~~il  308 (396)
T 4eut_A          279 LTPVLANILEADQEKCWGFDQFFAETSDIL  308 (396)
T ss_dssp             HHHHHHHHSCCCTTTSCCHHHHHHHHHHHH
T ss_pred             chHHHHHhhccChhhhccHHHHHHHHHHHh
Confidence            889999999999999999999999988763

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=99.93  E-value=2.8e-26  Score=156.65  Aligned_cols=130  Identities=17%  Similarity=0.218  Sum_probs=104.8

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeec-cccchhhccccccccccc-----CCcccCCcccCccccccCCCCCCcchhhHH
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQID-EDLTARINMADAQFSFQQ-----RGRCYYPAWMSPEALQKKPGDRNLEACDMW   78 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~-~~~~~kl~~~d~g~~~~~-----~~~~~~~~~~~pe~~~~~~~~~~~~~~dv~   78 (153)
                      ..-++.|||++++.|+||.+.||+++ .++.+||.  |||++...     ....+++.|++||.+.+..  ..+.++|+|
T Consensus       158 i~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~kL~--Dfg~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~~Di~  233 (320)
T 3a99_A          158 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLI--DFGSGALLKDTVYTDFDGTRVYSPPEWIRYHR--YHGRSAAVW  233 (320)
T ss_dssp             HHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEEC--CCTTCEECCSSCBCCCCSCGGGSCHHHHHHSC--BCHHHHHHH
T ss_pred             HHHHHHHHHHCCcEeCCCCHHHEEEeCCCCCEEEe--eCccccccccccccCCCCCccCCChHHhccCC--CCCccchHH
Confidence            34578999999999999999999999 67888888  99988433     2346889999999987532  224788999


Q ss_pred             HHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581         79 SFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus        79 s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      |+|++++++++|..||....      .....  ....+...+..+.+++.+||+.||++|||++++++
T Consensus       234 slG~il~el~~g~~pf~~~~------~~~~~--~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~  293 (320)
T 3a99_A          234 SLGILLYDMVCGDIPFEHDE------EIIRG--QVFFRQRVSSECQHLIRWCLALRPSDRPTFEEIQN  293 (320)
T ss_dssp             HHHHHHHHHHHSSCSCCSHH------HHHHC--CCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             hHHHHHHHHHHCCCCCCChh------hhhcc--cccccccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            99999999999999986532      12222  23345678999999999999999999999999986

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=99.93  E-value=8.4e-26  Score=153.76  Aligned_cols=138  Identities=20%  Similarity=0.176  Sum_probs=106.4

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeec-cccchhhccccccccccc----------CCcccCCcccCccccccCCCCCCcc
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQID-EDLTARINMADAQFSFQQ----------RGRCYYPAWMSPEALQKKPGDRNLE   73 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~-~~~~~kl~~~d~g~~~~~----------~~~~~~~~~~~pe~~~~~~~~~~~~   73 (153)
                      ..-++.|||++++.|+||.+.||+++ .++.+|+.  |||.+...          ....++..|++||.+...  ..++.
T Consensus       129 i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~kl~--Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~  204 (320)
T 2i6l_A          129 LLRGLKYIHSANVLHRDLKPANLFINTEDLVLKIG--DFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSP--NNYTK  204 (320)
T ss_dssp             HHHHHHHHHHTTCBCCCCSGGGEEEETTTTEEEEC--CCTTCBCC--------CCCGGGSCCTTCCHHHHHCT--TCCCH
T ss_pred             HHHHHHHHHhCCEecCCCCHHHEEEcCCCCeEEEc--cCccccccCCCcccccccccccccccccCcHHhcCc--ccCCc
Confidence            34578999999999999999999997 55677887  99988432          123568889999987642  24568


Q ss_pred             hhhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccc-----------------------c-----CCCCCCCHHHHH
Q psy12581         74 ACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLR-----------------------I-----TIPPGISSHLSK  125 (153)
Q Consensus        74 ~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~-----------------------~-----~~~~~~~~~~~~  125 (153)
                      ++|+||+|++++++++|+.||.+.........+......                       .     ..+...+..+.+
T Consensus       205 ~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (320)
T 2i6l_A          205 AIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVD  284 (320)
T ss_dssp             HHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHSCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHH
T ss_pred             hhhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHH
Confidence            999999999999999999999887655544433221100                       0     012457889999


Q ss_pred             HHHHHhcCCCCCCCCHHHHHH
Q psy12581        126 LIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus       126 l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      ++.+||+.||++|||++++++
T Consensus       285 li~~~L~~dP~~Rpt~~ell~  305 (320)
T 2i6l_A          285 FLEQILTFSPMDRLTAEEALS  305 (320)
T ss_dssp             HHHTTSCSSGGGSCCHHHHHT
T ss_pred             HHHHHcCCCccccCCHHHHhC
Confidence            999999999999999999975

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=99.93  E-value=1.2e-25  Score=159.29  Aligned_cols=138  Identities=19%  Similarity=0.192  Sum_probs=100.6

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeecccc-------------chhhccccccccccc-----------CCcccCCcccCc
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDL-------------TARINMADAQFSFQQ-----------RGRCYYPAWMSP   60 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~-------------~~kl~~~d~g~~~~~-----------~~~~~~~~~~~p   60 (153)
                      ..-++.|||++++.|+||++.||+++.++             .+|+.  |||++...           ....||+.|+||
T Consensus       124 i~~aL~~LH~~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~--DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aP  201 (434)
T 2rio_A          124 IASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILIS--DFGLCKKLDSGQSSFRTNLNNPSGTSGWRAP  201 (434)
T ss_dssp             HHHHHHHHHHTTEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEEC--CCTTCEECCC--------------CCTTSCH
T ss_pred             HHHHHHHHHHCCccccCCChHhEEEecCcccccccccCCCceEEEEc--ccccceecCCCCccceeeecCCCCCCCccCH
Confidence            44578999999999999999999997654             45555  99998432           123689999999


Q ss_pred             cccccCC----CCCCcchhhHHHHHHHHHHHHh-CCCCCCCCCchhhhHHHHhhccccCCC-----CCCCHHHHHHHHHH
Q psy12581         61 EALQKKP----GDRNLEACDMWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIP-----PGISSHLSKLIRIC  130 (153)
Q Consensus        61 e~~~~~~----~~~~~~~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~l~~~c  130 (153)
                      |.+.+..    ...++.++|+||+|++++++++ |..||.......  ..+.......+..     ...+..+.+++.+|
T Consensus       202 E~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~--~~i~~~~~~~~~~~~~~~~~~~~~~~~li~~~  279 (434)
T 2rio_A          202 ELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRE--SNIIRGIFSLDEMKCLHDRSLIAEATDLISQM  279 (434)
T ss_dssp             HHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTHH--HHHHHTCCCCCCCTTCCCHHHHHHHHHHHHHH
T ss_pred             HHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhhH--HHHhcCCCCcccccccccccchHHHHHHHHHH
Confidence            9986521    1346689999999999999998 999997654333  2222222222111     12347899999999


Q ss_pred             hcCCCCCCCCHHHHHH
Q psy12581        131 MNEDPGKRPTFDMVLP  146 (153)
Q Consensus       131 l~~~p~~Rps~~~~l~  146 (153)
                      |+.||++|||+.++++
T Consensus       280 L~~dP~~Rps~~eil~  295 (434)
T 2rio_A          280 IDHDPLKRPTAMKVLR  295 (434)
T ss_dssp             TCSSGGGSCCHHHHHT
T ss_pred             hhCChhhCCCHHHHHh
Confidence            9999999999999975

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=99.93  E-value=7.2e-26  Score=154.95  Aligned_cols=138  Identities=17%  Similarity=0.108  Sum_probs=102.9

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeecccc-chhhccccccccccc------CCcccCCcccCccccccCCCCCCcchhhH
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDL-TARINMADAQFSFQQ------RGRCYYPAWMSPEALQKKPGDRNLEACDM   77 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~-~~kl~~~d~g~~~~~------~~~~~~~~~~~pe~~~~~~~~~~~~~~dv   77 (153)
                      ..-++.|||++++.|+||++.||+++.++ .+||.  |||++...      ....+++.|++||.+.+.  ..++.++|+
T Consensus       139 i~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~~kl~--Dfg~a~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~~Di  214 (330)
T 3nsz_A          139 ILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLI--DWGLAEFYHPGQEYNVRVASRYFKGPELLVDY--QMYDYSLDM  214 (330)
T ss_dssp             HHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEEC--CCTTCEECCTTCCCCSCCSCGGGCCHHHHTTC--CCCCTHHHH
T ss_pred             HHHHHHHHHhCCeeeCCCCHHHEEEcCCCCEEEEE--eCCCceEcCCCCccccccccccccChhhhcCC--CcCCchhhH
Confidence            34578999999999999999999999776 67877  99998432      234678899999998652  235689999


Q ss_pred             HHHHHHHHHHHhCCCCCCCCCch-hhhHHHHh------------h-cc----------------------ccCCCCCCCH
Q psy12581         78 WSFAVLLWELATREVPFADLTPM-EVGMKVAL------------E-GL----------------------RITIPPGISS  121 (153)
Q Consensus        78 ~s~g~~~~~~~~g~~p~~~~~~~-~~~~~~~~------------~-~~----------------------~~~~~~~~~~  121 (153)
                      ||+|++++++++|..||...... .....+..            . ..                      ....+...+.
T Consensus       215 wslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  294 (330)
T 3nsz_A          215 WSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSP  294 (330)
T ss_dssp             HHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCH
T ss_pred             HHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHHhccccccchhhhhhhccccchhhhccccccccCCH
Confidence            99999999999999998543322 11111100            0 00                      0011122688


Q ss_pred             HHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581        122 HLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus       122 ~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      .+.+++.+||+.||++|||++++++
T Consensus       295 ~~~~li~~~L~~dP~~Rpta~e~l~  319 (330)
T 3nsz_A          295 EALDFLDKLLRYDHQSRLTAREAME  319 (330)
T ss_dssp             HHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred             HHHHHHHHHhcCCcccCCCHHHHhc
Confidence            9999999999999999999999986

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=99.93  E-value=2.1e-26  Score=159.87  Aligned_cols=137  Identities=16%  Similarity=0.132  Sum_probs=98.8

Q ss_pred             hhhHHhhhhcC-CCCCCCeeeeeeeecccc------chhhccccccccccc----CCcccCCcccCccccccCCCCCCcc
Q psy12581          5 KIVYSFYLNSK-KSKTSNAFLFCCQIDEDL------TARINMADAQFSFQQ----RGRCYYPAWMSPEALQKKPGDRNLE   73 (153)
Q Consensus         5 ~~~~~~~lh~~-~i~~~ni~~~~~~~~~~~------~~kl~~~d~g~~~~~----~~~~~~~~~~~pe~~~~~~~~~~~~   73 (153)
                      ..-++.|||++ ++.|+||++.||+++.++      .+||.  |||++...    ....+|+.|++||.+.+.   .++.
T Consensus       140 i~~aL~~lH~~~~ivH~Dikp~NIll~~~~~~~~~~~~kl~--Dfg~a~~~~~~~~~~~~t~~y~aPE~~~~~---~~~~  214 (373)
T 1q8y_A          140 LLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIA--DLGNACWYDEHYTNSIQTREYRSPEVLLGA---PWGC  214 (373)
T ss_dssp             HHHHHHHHHHTTCEECSCCSGGGEEEEEEETTTTEEEEEEC--CCTTCEETTBCCCSCCSCGGGCCHHHHHTC---CCCT
T ss_pred             HHHHHHHHHhcCCEEecCCChHHeEEeccCCCcCcceEEEc--ccccccccCCCCCCCCCCccccCcHHHhCC---CCCc
Confidence            45578999998 999999999999996443      55666  99998432    345789999999999864   3458


Q ss_pred             hhhHHHHHHHHHHHHhCCCCCCCCCch------hhhHHHHhh-c------------------------------------
Q psy12581         74 ACDMWSFAVLLWELATREVPFADLTPM------EVGMKVALE-G------------------------------------  110 (153)
Q Consensus        74 ~~dv~s~g~~~~~~~~g~~p~~~~~~~------~~~~~~~~~-~------------------------------------  110 (153)
                      ++|+||+|+++|++++|..||.+....      .....+... +                                    
T Consensus       215 ~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  294 (373)
T 1q8y_A          215 GADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLED  294 (373)
T ss_dssp             HHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHH
T ss_pred             hHhHHHHHHHHHHHHhCCCCCCCCcccccCChHHHHHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhh
Confidence            999999999999999999999754321      111111100 0                                    


Q ss_pred             ---cccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581        111 ---LRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus       111 ---~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                         .....+...+..+.+++.+||+.||++|||++++++
T Consensus       295 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  333 (373)
T 1q8y_A          295 VLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVN  333 (373)
T ss_dssp             HHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHT
T ss_pred             hhhhcccCCcchHHHHHHHHHHHhccCccccCCHHHHhh
Confidence               001122334567889999999999999999999985

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=99.92  E-value=4.6e-26  Score=156.53  Aligned_cols=137  Identities=21%  Similarity=0.329  Sum_probs=86.2

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeecccc---chhhccccccccccc-----CCcccCCcccCccccccCCCCCCcchhh
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDL---TARINMADAQFSFQQ-----RGRCYYPAWMSPEALQKKPGDRNLEACD   76 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~---~~kl~~~d~g~~~~~-----~~~~~~~~~~~pe~~~~~~~~~~~~~~d   76 (153)
                      ..-++.|||++++.|+||.+.||+++.++   .+|+.  |||++...     ....+++.|++||.+.+.   .++.++|
T Consensus       137 l~~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~~kl~--Dfg~~~~~~~~~~~~~~~t~~y~aPE~~~~~---~~~~~~D  211 (336)
T 3fhr_A          137 IGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLT--DFGFAKETTQNALQTPCYTPYYVAPEVLGPE---KYDKSCD  211 (336)
T ss_dssp             HHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEEC--CCTTCEEC----------------------C---HHHHHHH
T ss_pred             HHHHHHHHHhCCeecCCCCHHHEEEEecCCCceEEEe--ccccceeccccccccCCCCcCccChhhhCCC---CCCchhh
Confidence            34578999999999999999999998643   36666  99998433     234678999999998653   3458899


Q ss_pred             HHHHHHHHHHHHhCCCCCCCCCchhhhH----HHHhhcc--ccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581         77 MWSFAVLLWELATREVPFADLTPMEVGM----KVALEGL--RITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus        77 v~s~g~~~~~~~~g~~p~~~~~~~~~~~----~~~~~~~--~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      +||+|++++++++|..||.+........    .+.....  ..+.....+..+.+++.+||+.||++|||++++++
T Consensus       212 i~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~  287 (336)
T 3fhr_A          212 MWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMN  287 (336)
T ss_dssp             HHHHHHHHHHHHHSSCCC---------------------CCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHHHHHHCCCCCCCccchhhhhhHHHhhhccccccCchhhccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence            9999999999999999997654333211    1111111  11222467899999999999999999999999986

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=99.92  E-value=4.1e-25  Score=150.20  Aligned_cols=130  Identities=18%  Similarity=0.267  Sum_probs=104.9

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeec-cccchhhccccccccccc-----CCcccCCcccCccccccCCCCCCcchhhHH
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQID-EDLTARINMADAQFSFQQ-----RGRCYYPAWMSPEALQKKPGDRNLEACDMW   78 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~-~~~~~kl~~~d~g~~~~~-----~~~~~~~~~~~pe~~~~~~~~~~~~~~dv~   78 (153)
                      ..-++.|||++++.|+||.+.||+++ .++.+++.  |||.+...     ....++..|++||.+.+...  .+.++|+|
T Consensus       148 i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~kl~--dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~--~~~~~Di~  223 (312)
T 2iwi_A          148 VVAAIQHCHSRGVVHRDIKDENILIDLRRGCAKLI--DFGSGALLHDEPYTDFDGTRVYSPPEWISRHQY--HALPATVW  223 (312)
T ss_dssp             HHHHHHHHHHHTEECCCCSGGGEEEETTTTEEEEC--CCSSCEECCSSCBCCCCSCTTTSCHHHHHHSCB--CHHHHHHH
T ss_pred             HHHHHHHHHHCCeeecCCChhhEEEeCCCCeEEEE--EcchhhhcccCcccccCCcccccCceeeecCCC--CCccchHH
Confidence            34578999999999999999999999 78888888  99987432     33468889999999875322  23589999


Q ss_pred             HHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581         79 SFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus        79 s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      |+|++++++++|+.||....      .....  ....+...+..+.+++.+||+.+|++|||++++++
T Consensus       224 slG~il~~l~~g~~pf~~~~------~~~~~--~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~  283 (312)
T 2iwi_A          224 SLGILLYDMVCGDIPFERDQ------EILEA--ELHFPAHVSPDCCALIRRCLAPKPSSRPSLEEILL  283 (312)
T ss_dssp             HHHHHHHHHHHSSCSCCSHH------HHHHT--CCCCCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred             HHHHHHHHHHHCCCCCCChH------HHhhh--ccCCcccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence            99999999999999986531      12222  33456778999999999999999999999999986

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=99.92  E-value=2.8e-25  Score=150.07  Aligned_cols=134  Identities=19%  Similarity=0.250  Sum_probs=97.6

Q ss_pred             hhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc---------------------CCcccCCcccCccccc
Q psy12581          6 IVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ---------------------RGRCYYPAWMSPEALQ   64 (153)
Q Consensus         6 ~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~---------------------~~~~~~~~~~~pe~~~   64 (153)
                      .-++.|||++++.|+||.+.||+++.++.+++.  |||.+...                     ....+++.|++||.+.
T Consensus       126 ~~~l~~LH~~~i~H~dlkp~Nil~~~~~~~kl~--dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  203 (303)
T 1zy4_A          126 LEALSYIHSQGIIHRDLKPMNIFIDESRNVKIG--DFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLD  203 (303)
T ss_dssp             HHHHHHHHHTTCCCSCCCGGGEEECTTSCEEEC--CCCCCSCTTC-------------------------CTTSCHHHHT
T ss_pred             HHHHHHHHhCCeecccCCHHhEEEcCCCCEEEe--eCcchhhcccccchhccccccccccccccccCCCcccccCccccc
Confidence            456899999999999999999999999988888  99987432                     1235788999999987


Q ss_pred             cCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCch-hhhHHHHhhc--cccCCCCCCCHHHHHHHHHHhcCCCCCCCCH
Q psy12581         65 KKPGDRNLEACDMWSFAVLLWELATREVPFADLTPM-EVGMKVALEG--LRITIPPGISSHLSKLIRICMNEDPGKRPTF  141 (153)
Q Consensus        65 ~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~  141 (153)
                      +.  ..++.++|+||+|+++|++++   ||...... .....+....  .....+...+..+.+++.+||+.||++|||+
T Consensus       204 ~~--~~~~~~~Di~slG~il~~l~~---p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~  278 (303)
T 1zy4_A          204 GT--GHYNEKIDMYSLGIIFFEMIY---PFSTGMERVNILKKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGA  278 (303)
T ss_dssp             SC--SCCCTHHHHHHHHHHHHHHHS---CCSSHHHHHHHHHHHHSTTCCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCH
T ss_pred             CC--CCCcchhhHHHHHHHHHHHHh---ccCCchhHHHHHHhccccccccCccccccchHHHHHHHHHHHhcCcccCcCH
Confidence            53  235589999999999999997   44332222 2222221111  1222344567789999999999999999999


Q ss_pred             HHHHH
Q psy12581        142 DMVLP  146 (153)
Q Consensus       142 ~~~l~  146 (153)
                      .++++
T Consensus       279 ~~ll~  283 (303)
T 1zy4_A          279 RTLLN  283 (303)
T ss_dssp             HHHHH
T ss_pred             HHHhC
Confidence            99986

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=99.91  E-value=1.6e-25  Score=155.29  Aligned_cols=136  Identities=12%  Similarity=0.038  Sum_probs=104.1

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeecc-----------ccchhhccccccccccc---------CCcccCCcccCccccc
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDE-----------DLTARINMADAQFSFQQ---------RGRCYYPAWMSPEALQ   64 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~-----------~~~~kl~~~d~g~~~~~---------~~~~~~~~~~~pe~~~   64 (153)
                      ..-++.|||+++|+|+||++.||+++.           ++.+||.  |||++...         ...+||+.|+|||.+.
T Consensus       181 i~~~L~~lH~~~ivHrDiKp~NIll~~~~~~~~~~~~~~~~~kl~--DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~  258 (365)
T 3e7e_A          181 MLYMIEQVHDCEIIHGDIKPDNFILGNGFLEQDDEDDLSAGLALI--DLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLS  258 (365)
T ss_dssp             HHHHHHHHHTTTEECCCCSGGGEEECGGGTCC------CTTEEEC--CCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHT
T ss_pred             HHHHHHHHhhCCeecCCCCHHHEEecccccCccccccccCCEEEe--eCchhhhhhccCCCceeeeecCCCCCCChHHhc
Confidence            455789999999999999999999998           7778887  99998422         3447899999999998


Q ss_pred             cCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCC-CHHH
Q psy12581         65 KKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRP-TFDM  143 (153)
Q Consensus        65 ~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-s~~~  143 (153)
                      +.   .++.++|+||+|+++|++++|+.||.........   . .....  ....+..+.+++..|+..+|.+|+ ++++
T Consensus       259 ~~---~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~---~-~~~~~--~~~~~~~~~~~~~~~l~~~p~~r~~~~~~  329 (365)
T 3e7e_A          259 NK---PWNYQIDYFGVAATVYCMLFGTYMKVKNEGGECK---P-EGLFR--RLPHLDMWNEFFHVMLNIPDCHHLPSLDL  329 (365)
T ss_dssp             TC---CBSTHHHHHHHHHHHHHHHHSSCCCEEEETTEEE---E-CSCCT--TCSSHHHHHHHHHHHHCCCCTTCCCCHHH
T ss_pred             CC---CCCccccHHHHHHHHHHHHhCCCccccCCCCcee---e-chhcc--ccCcHHHHHHHHHHHcCCCCCCcchHHHH
Confidence            64   3568999999999999999999998543221110   0 00001  112356788999999999999995 6888


Q ss_pred             HHHHHhhh
Q psy12581        144 VLPILDKM  151 (153)
Q Consensus       144 ~l~~L~~~  151 (153)
                      +.+.|+++
T Consensus       330 l~~~l~~~  337 (365)
T 3e7e_A          330 LRQKLKKV  337 (365)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHHHH
Confidence            88777765

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=99.88  E-value=4.4e-23  Score=139.57  Aligned_cols=121  Identities=19%  Similarity=0.279  Sum_probs=88.4

Q ss_pred             hhHHhhhhcCCCCCCCeeeeeeeecc---ccchhhcccccccccccCCcccCCcccCccccccCCCCCCcchhhHHHHHH
Q psy12581          6 IVYSFYLNSKKSKTSNAFLFCCQIDE---DLTARINMADAQFSFQQRGRCYYPAWMSPEALQKKPGDRNLEACDMWSFAV   82 (153)
Q Consensus         6 ~~~~~~lh~~~i~~~ni~~~~~~~~~---~~~~kl~~~d~g~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~dv~s~g~   82 (153)
                      .-++.|||++++.|+||.+.||+++.   ++.+++.  |||++.....                  ..++.++|+||+|+
T Consensus       127 ~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~--Dfg~a~~~~~------------------~~~~~~~DiwslG~  186 (299)
T 3m2w_A          127 GEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLT--DFGFAKETTG------------------EKYDKSCDMWSLGV  186 (299)
T ss_dssp             HHHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEEC--CCTTCEECTT------------------CGGGGHHHHHHHHH
T ss_pred             HHHHHHHHhCCcccCCCCHHHEEEecCCCCCcEEEe--cccccccccc------------------ccCCchhhHHHHHH
Confidence            45789999999999999999999998   6667777  9998743221                  13447899999999


Q ss_pred             HHHHHHhCCCCCCCCCchhhhHHHHhh--ccccCCC----CCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581         83 LLWELATREVPFADLTPMEVGMKVALE--GLRITIP----PGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus        83 ~~~~~~~g~~p~~~~~~~~~~~~~~~~--~~~~~~~----~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      ++|++++|..||.+.............  ......+    ...+..+.+++.+||+.||++|||+.++++
T Consensus       187 il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~  256 (299)
T 3m2w_A          187 IMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMN  256 (299)
T ss_dssp             HHHHHHHSSCSCCC-------CCSCCSSCTTCCSSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             HHHHHHHCCCCCCCCcchhhhHHHHHHHhhccccCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence            999999999999765433221111000  0011112    457899999999999999999999999985

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=99.88  E-value=2.8e-23  Score=152.64  Aligned_cols=135  Identities=15%  Similarity=0.102  Sum_probs=96.1

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccc---hhhccccccccccc------CCcccCCcccCccccccCCCCCCcchh
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLT---ARINMADAQFSFQQ------RGRCYYPAWMSPEALQKKPGDRNLEAC   75 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~---~kl~~~d~g~~~~~------~~~~~~~~~~~pe~~~~~~~~~~~~~~   75 (153)
                      ..-++.|||++++.|+||.+.||+++.++.   +++.  |||.+...      ....+++.|++||.+.+.   .++.++
T Consensus       130 Ll~aL~yLHs~gIVHrDLKP~NILl~~~g~~~~vKL~--DFG~a~~~~~~~~~~~~~gt~~Y~APE~l~~~---~~s~ks  204 (676)
T 3qa8_A          130 ISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKII--DLGYAKELDQGELCTEFVGTLQYLAPELLEQK---KYTVTV  204 (676)
T ss_dssp             HHHHHHHHHHTTBCCCCCCSTTEEEECCSSSCEEEEC--SCCCCCBTTSCCCCCCCCSCCTTCSSCSSCCS---CCSTTH
T ss_pred             HHHHHHHHHHCCCccCCCCHHHeEeecCCCceeEEEc--ccccccccccccccccccCCcccCChHHhccC---CCCchh
Confidence            345789999999999999999999997764   4555  99998543      234788999999998764   455899


Q ss_pred             hHHHHHHHHHHHHhCCCCCCCCCchhhhHH---------H-----Hhhc----cccC----CCCCCCHHHHHHHHHHhcC
Q psy12581         76 DMWSFAVLLWELATREVPFADLTPMEVGMK---------V-----ALEG----LRIT----IPPGISSHLSKLIRICMNE  133 (153)
Q Consensus        76 dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~---------~-----~~~~----~~~~----~~~~~~~~~~~l~~~cl~~  133 (153)
                      |+||+|+++|++++|..||.+.........         .     ....    ...+    .+...+..+.+++.+||..
T Consensus       205 DIwSLGviLyeLltG~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~  284 (676)
T 3qa8_A          205 DYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMW  284 (676)
T ss_dssp             HHHHHHHHHHHHHSSCSSCCSSCHHHHSSTTCC------CCSCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCS
T ss_pred             HHHHHHHHHHHHHHCCCCCCcccchhhhhhhhhcccchhhhhhhhhccccccccccCCchhhchhhhHHHHHHHHHHccC
Confidence            999999999999999999965422211100         0     0000    0111    1122467899999999999


Q ss_pred             CCCCCCCHHHH
Q psy12581        134 DPGKRPTFDMV  144 (153)
Q Consensus       134 ~p~~Rps~~~~  144 (153)
                      ||++|||+.++
T Consensus       285 DP~kRPTa~el  295 (676)
T 3qa8_A          285 HQRQRGTDPQN  295 (676)
T ss_dssp             SCC---CCTTC
T ss_pred             CHhhCcCHHHH
Confidence            99999999874

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=99.87  E-value=2.6e-22  Score=135.16  Aligned_cols=122  Identities=11%  Similarity=0.028  Sum_probs=93.8

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccccCCcccCCcccCccccccCCCCCCcchhhHHHHHHHH
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQRGRCYYPAWMSPEALQKKPGDRNLEACDMWSFAVLL   84 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~dv~s~g~~~   84 (153)
                      ..-++.|||++++.|+||++.||+++.+|.+|+.  +++             |++          ..+.++|+||+|+++
T Consensus       138 l~~aL~~lH~~givH~Dikp~NIll~~~g~~kl~--~~~-------------~~~----------~~~~~~Di~slG~il  192 (286)
T 3uqc_A          138 LAAAADAAHRAGVALSIDHPSRVRVSIDGDVVLA--YPA-------------TMP----------DANPQDDIRGIGASL  192 (286)
T ss_dssp             HHHHHHHHHHTTCCCCCCSGGGEEEETTSCEEEC--SCC-------------CCT----------TCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHCCCccCCCCcccEEEcCCCCEEEE--ecc-------------ccC----------CCCchhHHHHHHHHH
Confidence            3457899999999999999999999999988886  332             232          234789999999999


Q ss_pred             HHHHhCCCCCCCCCchhhhH---HHHhhccc--cCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHhhhh
Q psy12581         85 WELATREVPFADLTPMEVGM---KVALEGLR--ITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKMK  152 (153)
Q Consensus        85 ~~~~~g~~p~~~~~~~~~~~---~~~~~~~~--~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~~~~  152 (153)
                      |++++|+.||.+........   ........  ...+..++..+.+++.+||+.||++| |+.++++.|+++.
T Consensus       193 ~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~~L~~~~  264 (286)
T 3uqc_A          193 YALLVNRWPLPEAGVRSGLAPAERDTAGQPIEPADIDRDIPFQISAVAARSVQGDGGIR-SASTLLNLMQQAT  264 (286)
T ss_dssp             HHHHHSEECSCCCSBCCCSEECCBCTTSCBCCHHHHCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHHHHHHHH
T ss_pred             HHHHHCCCCCCcCCcchhhHHHHHHhccCCCChhhcccCCCHHHHHHHHHHcccCCccC-CHHHHHHHHHHHh
Confidence            99999999998765433211   11111111  01235688999999999999999999 9999999998864

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=99.86  E-value=7.2e-23  Score=151.95  Aligned_cols=132  Identities=14%  Similarity=0.049  Sum_probs=99.2

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc---CCcccCCcccCccccccCCCCCCcchhhHHHHH
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ---RGRCYYPAWMSPEALQKKPGDRNLEACDMWSFA   81 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~---~~~~~~~~~~~pe~~~~~~~~~~~~~~dv~s~g   81 (153)
                      ..-++.|||+++|+|+||++.||+++.+ .+||.  |||++...   ....||+.|++||.+.+.    .+.++|+||+|
T Consensus       191 i~~aL~~lH~~giiHrDlkp~NIll~~~-~~kl~--DFG~a~~~~~~~~~~gt~~y~aPE~~~~~----~~~~sDi~slG  263 (681)
T 2pzi_A          191 ILPALSYLHSIGLVYNDLKPENIMLTEE-QLKLI--DLGAVSRINSFGYLYGTPGFQAPEIVRTG----PTVATDIYTVG  263 (681)
T ss_dssp             HHHHHHHHHHTTEECCCCSGGGEEECSS-CEEEC--CCTTCEETTCCSCCCCCTTTSCTTHHHHC----SCHHHHHHHHH
T ss_pred             HHHHHHHHHHCCCeecccChHHeEEeCC-cEEEE--ecccchhcccCCccCCCccccCHHHHcCC----CCCceehhhhH
Confidence            3457899999999999999999999986 56666  99998543   345789999999998753    25899999999


Q ss_pred             HHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCC-HHHHHHHHhhh
Q psy12581         82 VLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPT-FDMVLPILDKM  151 (153)
Q Consensus        82 ~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps-~~~~l~~L~~~  151 (153)
                      ++++++++|..|+.+.......        ........+..+.+++.+||+.||++||+ ++++...|..+
T Consensus       264 ~~l~~l~~g~~~~~~~~~~~~~--------~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~  326 (681)
T 2pzi_A          264 RTLAALTLDLPTRNGRYVDGLP--------EDDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGV  326 (681)
T ss_dssp             HHHHHHHSCCCEETTEECSSCC--------TTCHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred             HHHHHHHhCCCCCccccccccc--------ccccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHHH
Confidence            9999999998887642211100        00000113568999999999999999995 66676666543

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=99.80  E-value=1.5e-20  Score=129.03  Aligned_cols=130  Identities=10%  Similarity=-0.021  Sum_probs=92.9

Q ss_pred             hhhHHhhhh-cCCCCCCCeeeeeeeecccc--------------------chhhccccccccccc--CCcccCCcccCcc
Q psy12581          5 KIVYSFYLN-SKKSKTSNAFLFCCQIDEDL--------------------TARINMADAQFSFQQ--RGRCYYPAWMSPE   61 (153)
Q Consensus         5 ~~~~~~~lh-~~~i~~~ni~~~~~~~~~~~--------------------~~kl~~~d~g~~~~~--~~~~~~~~~~~pe   61 (153)
                      ..-++.||| +++|.|+||++.||+++.++                    .+||.  |||++...  ....||+.|+|||
T Consensus       170 i~~aL~~lH~~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~--DFG~a~~~~~~~~~gt~~y~aPE  247 (336)
T 2vuw_A          170 LTASLAVAEASLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSII--DYTLSRLERDGIVVFCDVSMDED  247 (336)
T ss_dssp             HHHHHHHHHHHHCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEEC--CCTTCBEEETTEEECCCCTTCSG
T ss_pred             HHHHHHHHHHhCCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEe--eccccEecCCCcEEEeecccChh
Confidence            345789999 89999999999999999887                    66666  99998543  3347899999999


Q ss_pred             ccccCCCCCCcchhhHHHHHHH-HHHHHhCCCCCCCCCchh-hhHHHHhhccccCC-----CCCCCHHHHHHHHHHhcCC
Q psy12581         62 ALQKKPGDRNLEACDMWSFAVL-LWELATREVPFADLTPME-VGMKVALEGLRITI-----PPGISSHLSKLIRICMNED  134 (153)
Q Consensus        62 ~~~~~~~~~~~~~~dv~s~g~~-~~~~~~g~~p~~~~~~~~-~~~~~~~~~~~~~~-----~~~~~~~~~~l~~~cl~~~  134 (153)
                      .+.+..    +.++|+||++.+ .+++++|..||.+..... ....+.........     +...++++.+++.+||+.|
T Consensus       248 ~~~g~~----~~~~Diwsl~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~d  323 (336)
T 2vuw_A          248 LFTGDG----DYQFDIYRLMKKENNNRWGEYHPYSNVLWLHYLTDKMLKQMTFKTKCNTPAMKQIKRKIQEFHRTMLNFS  323 (336)
T ss_dssp             GGCCCS----SHHHHHHHHHHHHHTTCTTSCCTHHHHHHHHHHHHHHHHTCCCSSCCCSHHHHHHHHHHHHHHHHGGGSS
T ss_pred             hhcCCC----ccceehhhhhCCCCcccccccCCCcchhhhhHHHHhhhhhhccCcccchhhhhhcCHHHHHHHHHHhccC
Confidence            998642    579999998776 667788888874321111 11112211111111     1235678999999999976


Q ss_pred             CCCCCCHHHHH
Q psy12581        135 PGKRPTFDMVL  145 (153)
Q Consensus       135 p~~Rps~~~~l  145 (153)
                           |+++++
T Consensus       324 -----sa~e~l  329 (336)
T 2vuw_A          324 -----SATDLL  329 (336)
T ss_dssp             -----SHHHHH
T ss_pred             -----CHHHHH
Confidence                 888887

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=99.53  E-value=9.7e-17  Score=117.01  Aligned_cols=79  Identities=11%  Similarity=-0.070  Sum_probs=51.8

Q ss_pred             hhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc-------CCcccCCcccCccccccCCCCCCcchhhHH
Q psy12581          6 IVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ-------RGRCYYPAWMSPEALQKKPGDRNLEACDMW   78 (153)
Q Consensus         6 ~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~-------~~~~~~~~~~~pe~~~~~~~~~~~~~~dv~   78 (153)
                      .-++.|+|++||+|+||++.||+++.+|.+||.  |||++...       .+.+||+.|++||++.+.    ....+|+|
T Consensus       349 l~AL~ylH~~GIIHRDIKPeNILL~~dg~vKL~--DFGlAr~~~~~~~~~~t~vGTp~YmAPE~l~g~----~~~~~d~~  422 (569)
T 4azs_A          349 LRSLAALEKQGFWHDDVRPWNVMVDARQHARLI--DFGSIVTTPQDCSWPTNLVQSFFVFVNELFAEN----KSWNGFWR  422 (569)
T ss_dssp             HHHHHHHHHTTCEESCCCGGGEEECTTSCEEEC--CCTTEESCC---CCSHHHHHHHHHHHHHHC---------------
T ss_pred             HHHHHHHHHCCceeccCchHhEEECCCCCEEEe--ecccCeeCCCCCccccCceechhhccHHHhCCC----CCCccccc
Confidence            457899999999999999999999999998888  99998433       223789999999999763    33578999


Q ss_pred             HHHHHHHHHHhC
Q psy12581         79 SFAVLLWELATR   90 (153)
Q Consensus        79 s~g~~~~~~~~g   90 (153)
                      ++|+..+++.++
T Consensus       423 s~g~~~~~l~~~  434 (569)
T 4azs_A          423 SAPVHPFNLPQP  434 (569)
T ss_dssp             ------CCCCTT
T ss_pred             ccccchhhhccc
Confidence            999887655443

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=99.03  E-value=1.6e-11  Score=89.26  Aligned_cols=85  Identities=11%  Similarity=-0.057  Sum_probs=65.7

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccccC--------------CcccCCcccCccccccCCCCC
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQR--------------GRCYYPAWMSPEALQKKPGDR   70 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~--------------~~~~~~~~~~pe~~~~~~~~~   70 (153)
                      ..-++.|||+++|.|+||++.||+++.  .+|+.  |||++....              ...||+.|++||++..... .
T Consensus       440 i~~aL~~LH~~gIiHrDiKp~NILl~~--~~kL~--DFGla~~~~~~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~-~  514 (540)
T 3en9_A          440 IGEIVGKLHKNDVIHNDLTTSNFIFDK--DLYII--DFGLGKISNLDEDKAVDLIVFKKAVLSTHHEKFDEIWERFLE-G  514 (540)
T ss_dssp             HHHHHHHHHHTTEECTTCCTTSEEESS--SEEEC--CCTTCEECCCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHH-H
T ss_pred             HHHHHHHHHHCcCccCCCCHHHEEECC--eEEEE--ECccCEECCCccccccchhhhhhhhcCCCCcCCHHHHHHHHH-H
Confidence            345689999999999999999999998  66666  999985432              3478999999999875211 2


Q ss_pred             CcchhhHHHHHHHHHHHHhCCCCC
Q psy12581         71 NLEACDMWSFAVLLWELATREVPF   94 (153)
Q Consensus        71 ~~~~~dv~s~g~~~~~~~~g~~p~   94 (153)
                      ++...|.|+..+-..+...++.+|
T Consensus       515 Y~~~~d~ws~vl~~l~~v~~r~rY  538 (540)
T 3en9_A          515 YKSVYDRWEIILELMKDVERRARY  538 (540)
T ss_dssp             HHHHCTTHHHHHHHHHHHHTCSCC
T ss_pred             HHHHHhHHHHHHHHHHHHHhcccc
Confidence            346678999988888877766665

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=98.37  E-value=2.8e-08  Score=66.61  Aligned_cols=51  Identities=10%  Similarity=-0.087  Sum_probs=41.8

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccccCCcccCCcccCccccc
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQRGRCYYPAWMSPEALQ   64 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~~~~~~~~~~~pe~~~   64 (153)
                      ..-++.|||++++.|+||++.||+++ ++.+||.  |||.+..      +..+.+||.+.
T Consensus       202 i~~~l~~lH~~giiHrDlkp~NILl~-~~~vkl~--DFG~a~~------~~~~~a~e~l~  252 (282)
T 1zar_A          202 ILEEVAKFYHRGIVHGDLSQYNVLVS-EEGIWII--DFPQSVE------VGEEGWREILE  252 (282)
T ss_dssp             HHHHHHHHHHTTEECSCCSTTSEEEE-TTEEEEC--CCTTCEE------TTSTTHHHHHH
T ss_pred             HHHHHHHHHHCCCEeCCCCHHHEEEE-CCcEEEE--ECCCCeE------CCCCCHHHHHH
Confidence            34578899999999999999999999 8888888  9998753      34567777764

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=97.77  E-value=5e-06  Score=54.90  Aligned_cols=38  Identities=5%  Similarity=-0.108  Sum_probs=31.6

Q ss_pred             hhHHhhhh-cCCCCCCCeeeeeeeeccccchhhcccccccccc
Q psy12581          6 IVYSFYLN-SKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQ   47 (153)
Q Consensus         6 ~~~~~~lh-~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~   47 (153)
                      .-++.||| ++++.|+||++.||+++.  .+++.  |||++..
T Consensus       180 ~~~l~~lH~~~givHrDlkp~NILl~~--~~~li--DFG~a~~  218 (258)
T 1zth_A          180 VENVKRLYQEAELVHADLSEYNIMYID--KVYFI--DMGQAVT  218 (258)
T ss_dssp             HHHHHHHHHTSCEECSSCSTTSEEESS--SEEEC--CCTTCEE
T ss_pred             HHHHHHHHHHCCEEeCCCCHHHEEEcC--cEEEE--ECccccc
Confidence            34678999 999999999999999988  55555  9998754

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=96.44  E-value=0.00063  Score=47.68  Aligned_cols=41  Identities=12%  Similarity=-0.039  Sum_probs=31.9

Q ss_pred             hHHhhhhcCCCCCCCeeeeeeeeccccch--------hhcccccccccc
Q psy12581          7 VYSFYLNSKKSKTSNAFLFCCQIDEDLTA--------RINMADAQFSFQ   47 (153)
Q Consensus         7 ~~~~~lh~~~i~~~ni~~~~~~~~~~~~~--------kl~~~d~g~~~~   47 (153)
                      -+..+||+.+++|+|+++.||+++.+|..        .+.++||+-+..
T Consensus       216 ~~l~~lH~~gIVHrDLKp~NILl~~dgd~~d~~~~~~~~~iID~~Q~V~  264 (397)
T 4gyi_A          216 ALILRLAKHGLIHGDFNEFNILIREEKDAEDPSSITLTPIIIXFPQMVS  264 (397)
T ss_dssp             HHHHHHHHTTEECSCCSTTSEEEEEEECSSCTTSEEEEEEECCCTTCEE
T ss_pred             HHHHHHHHCCCcCCCCCHHHEEEeCCCCcccccccccceEEEEeCCccc
Confidence            35678999999999999999999988742        244559876543

>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A

Probab=94.35  E-value=0.22  Score=32.16  Aligned_cols=69  Identities=12%  Similarity=0.120  Sum_probs=41.6

Q ss_pred             cccCccccccCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcC--
Q psy12581         56 AWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNE--  133 (153)
Q Consensus        56 ~~~~pe~~~~~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~--  133 (153)
                      .+.+||....    ..+.+.-||++|+++|..+--..                   ....+...++.+..++..|...  
T Consensus       102 ~~~~pe~~~~----~~te~~~IysLG~tLY~ALDygL-------------------~e~eE~eLS~~LE~LL~~Mt~~~~  158 (229)
T 2yle_A          102 PPVAGKLGYS----QCMETEVIESLGIIIYKALDYGL-------------------KENEERELSPPLEQLIDHMANTVE  158 (229)
T ss_dssp             -----CCSSS----SSCHHHHHHHHHHHHHHHHTTTC-------------------CTTEEECCCHHHHHHHHHHTTCCC
T ss_pred             CCCChhhccc----cchHHHHHHHHHHHHHHHhhcCC-------------------CcccchhhCHHHHHHHHHHHhccc
Confidence            4556665431    23467889999999998764222                   1222334677777777777644  


Q ss_pred             -----------------------CCCCCCCHHHHHHH
Q psy12581        134 -----------------------DPGKRPTFDMVLPI  147 (153)
Q Consensus       134 -----------------------~p~~Rps~~~~l~~  147 (153)
                                             .+..|+++++|++.
T Consensus       159 d~~~~DeG~~~~~eg~~d~~~~~~~~~~~sl~~Vi~~  195 (229)
T 2yle_A          159 ADGSNDEGYEAAEEGLGDEDEKRKISAIRSYRDVMKL  195 (229)
T ss_dssp             --------------------CCSCCCCCCSHHHHHHH
T ss_pred             ccccccccccccccccccccccccccCcCCHHHHHHH
Confidence                                   34688899998865

>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A

Probab=88.71  E-value=0.036  Score=37.14  Aligned_cols=20  Identities=15%  Similarity=0.413  Sum_probs=17.2

Q ss_pred             hhHHHHHHHHHHHHhCCCCC
Q psy12581         75 CDMWSFAVLLWELATREVPF   94 (153)
Q Consensus        75 ~dv~s~g~~~~~~~~g~~p~   94 (153)
                      .+.|+++.+++.+.+|..+|
T Consensus       268 ~~~~~l~~~~~~~~~g~~~~  287 (304)
T 3sg8_A          268 EKYWSFEKIIYGKEYGYMDW  287 (304)
T ss_dssp             HHHHHHHHHHHHHHTTCHHH
T ss_pred             HHHHHHHHHHHHHHcCCHHH
Confidence            57899999999999987765

>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6

Probab=88.35  E-value=0.064  Score=34.70  Aligned_cols=27  Identities=11%  Similarity=-0.011  Sum_probs=19.5

Q ss_pred             CCCCCeeeeeeeeccccchhhcccccccc
Q psy12581         17 SKTSNAFLFCCQIDEDLTARINMADAQFS   45 (153)
Q Consensus        17 i~~~ni~~~~~~~~~~~~~kl~~~d~g~~   45 (153)
                      +.|+|+.+.||+++.++.+.+.  ||+.+
T Consensus       186 l~HgDl~~~Nil~~~~~~~~li--D~~~a  212 (264)
T 1nd4_A          186 VTHGDACLPNIMVENGRFSGFI--DCGRL  212 (264)
T ss_dssp             EECSSCCGGGEEEETTEEEEEC--CCTTC
T ss_pred             EECCCCCCCcEEEECCcEEEEE--cchhc
Confidence            6788888888888776544455  99864

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=85.15  E-value=0.5  Score=31.41  Aligned_cols=32  Identities=16%  Similarity=0.055  Sum_probs=22.4

Q ss_pred             hhHHhhhhcCCCCCCCeeee---eeeeccccchhh
Q psy12581          6 IVYSFYLNSKKSKTSNAFLF---CCQIDEDLTARI   37 (153)
Q Consensus         6 ~~~~~~lh~~~i~~~ni~~~---~~~~~~~~~~kl   37 (153)
                      .+|..-+-||||||+||+++   ++.+.+-|..+.
T Consensus       127 ylH~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~  161 (275)
T 3hyh_A          127 YCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNI  161 (275)
T ss_dssp             HHHHTTCCCCCCCTTTEEECTTCCEEECCSSCC--
T ss_pred             HHHHCCcccccCChHHeEECCCCCEEEeecCCCee
Confidence            35666778899999999984   566666665554

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=83.92  E-value=0.48  Score=31.83  Aligned_cols=32  Identities=19%  Similarity=0.104  Sum_probs=22.0

Q ss_pred             hhHHhhhhcCCCCCCCeeee---eeeeccccchhh
Q psy12581          6 IVYSFYLNSKKSKTSNAFLF---CCQIDEDLTARI   37 (153)
Q Consensus         6 ~~~~~~lh~~~i~~~ni~~~---~~~~~~~~~~kl   37 (153)
                      -+|..-+-||||||+||+++   ++.+.+-|..+.
T Consensus       133 ylH~~~IiHRDlKp~NILl~~~~~vKl~DFGla~~  167 (299)
T 4g31_A          133 FLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTA  167 (299)
T ss_dssp             HHHHTTCCCCCCCGGGEEECTTCCEEECCCCCC--
T ss_pred             HHHHCcCccccCcHHHeEECCCCcEEEccCcccee
Confidence            35566677899999999984   566666565543

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=83.44  E-value=0.42  Score=32.44  Aligned_cols=32  Identities=22%  Similarity=0.118  Sum_probs=23.0

Q ss_pred             hhHHhhhhcCCCCCCCeeee---eeeeccccchhh
Q psy12581          6 IVYSFYLNSKKSKTSNAFLF---CCQIDEDLTARI   37 (153)
Q Consensus         6 ~~~~~~lh~~~i~~~ni~~~---~~~~~~~~~~kl   37 (153)
                      -+|...+-||||||+||+++   ++.+.+-|..+.
T Consensus       147 ylH~~~IiHRDlKPeNILl~~~g~vKl~DFGla~~  181 (311)
T 4aw0_A          147 YLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKV  181 (311)
T ss_dssp             HHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred             HHHHCCCccCCCCHHHeEEcCCCCEEEEEcCCcee
Confidence            35666777899999999994   466666565543

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=82.54  E-value=0.57  Score=31.39  Aligned_cols=27  Identities=19%  Similarity=0.239  Sum_probs=20.6

Q ss_pred             hhcCCCCCCCeeee----eeeeccccchhhc
Q psy12581         12 LNSKKSKTSNAFLF----CCQIDEDLTARIN   38 (153)
Q Consensus        12 lh~~~i~~~ni~~~----~~~~~~~~~~kl~   38 (153)
                      +-||||||+||+++    ++.|.+-|..++.
T Consensus       152 IiHRDlKp~NILl~~~~g~vKl~DFGla~~~  182 (290)
T 3fpq_A          152 IIHRDLKCDNIFITGPTGSVKIGDLGLATLK  182 (290)
T ss_dssp             CCCCCCCGGGEEESSTTSCEEECCTTGGGGC
T ss_pred             EEecccChhheeEECCCCCEEEEeCcCCEeC
Confidence            55699999999984    3677777776654

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=82.14  E-value=0.5  Score=32.65  Aligned_cols=31  Identities=26%  Similarity=0.245  Sum_probs=22.9

Q ss_pred             hHHhhhhcCCCCCCCeeee---eeeeccccchhh
Q psy12581          7 VYSFYLNSKKSKTSNAFLF---CCQIDEDLTARI   37 (153)
Q Consensus         7 ~~~~~lh~~~i~~~ni~~~---~~~~~~~~~~kl   37 (153)
                      +|..-+-||||||+||+++   ++.+.+-|..+.
T Consensus       141 lH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~  174 (350)
T 4b9d_A          141 VHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARV  174 (350)
T ss_dssp             HHHTTCEETTCCGGGEEECTTCCEEECSTTEESC
T ss_pred             HHHCCeeeccCCHHHEEECCCCCEEEccccccee
Confidence            4556677899999999994   566766666554

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=81.71  E-value=0.99  Score=30.51  Aligned_cols=31  Identities=19%  Similarity=0.217  Sum_probs=22.5

Q ss_pred             hHHhhhhcCCCCCCCeeee---eeeeccccchhh
Q psy12581          7 VYSFYLNSKKSKTSNAFLF---CCQIDEDLTARI   37 (153)
Q Consensus         7 ~~~~~lh~~~i~~~ni~~~---~~~~~~~~~~kl   37 (153)
                      +|..-+-|||+||+||+++   ++.|.+-|..++
T Consensus       148 LH~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~  181 (307)
T 3omv_A          148 LHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATV  181 (307)
T ss_dssp             HHHTTCBCSCCCSSSEEEETTEEEEECCCSSCBC
T ss_pred             HHHCCccCCccCHHHEEECCCCcEEEeeccCcee
Confidence            4455667899999999994   566766665554

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=80.64  E-value=0.68  Score=31.92  Aligned_cols=31  Identities=6%  Similarity=0.009  Sum_probs=22.6

Q ss_pred             hhHHhhhhcCCCCCCCeeee---eeeeccccchh
Q psy12581          6 IVYSFYLNSKKSKTSNAFLF---CCQIDEDLTAR   36 (153)
Q Consensus         6 ~~~~~~lh~~~i~~~ni~~~---~~~~~~~~~~k   36 (153)
                      .+|...+-||||||+||+++   ++.+.+-|..+
T Consensus       185 ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~  218 (346)
T 4fih_A          185 VLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCA  218 (346)
T ss_dssp             HHHHTTEECCCCSGGGEEECTTCCEEECCCTTCE
T ss_pred             HHHHCCcccccCCHHHEEECCCCCEEEecCcCce
Confidence            35666777899999999994   56666666544

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=80.42  E-value=0.61  Score=32.00  Aligned_cols=30  Identities=13%  Similarity=-0.032  Sum_probs=21.7

Q ss_pred             hHHhhhhcCCCCCCCeeee----eeeeccccchh
Q psy12581          7 VYSFYLNSKKSKTSNAFLF----CCQIDEDLTAR   36 (153)
Q Consensus         7 ~~~~~lh~~~i~~~ni~~~----~~~~~~~~~~k   36 (153)
                      +|..-+-||||||+||+++    .+.+.+-|..+
T Consensus       166 lH~~~IiHRDlKp~NILl~~~g~~vKl~DFGla~  199 (336)
T 4g3f_A          166 LHTRRILHGDVKADNVLLSSDGSRAALCDFGHAL  199 (336)
T ss_dssp             HHTTTEECSCCCGGGEEECTTSCCEEECCCTTCE
T ss_pred             HHHCCceecccCHHHEEEeCCCCEEEEeeCCCCe
Confidence            4566677899999999994    36666656554

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	153
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	9e-25
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	9e-23
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	5e-22
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	6e-22
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	1e-20
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	2e-20
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	3e-20
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	7e-20
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	8e-20
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	9e-20
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	1e-19
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	1e-19
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	1e-19
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	1e-19
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	2e-19
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	3e-19
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	5e-19
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	5e-19
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	6e-19
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	1e-18
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	1e-18
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	1e-18
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	1e-18
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	2e-18
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	3e-17
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	4e-17
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	1e-16
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	1e-16
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	2e-16
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	3e-16
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	5e-16
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	6e-16
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	1e-15
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	2e-15
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	3e-15
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	3e-15
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	4e-15
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	8e-15
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	9e-15
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	9e-15
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	1e-14
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	3e-14
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	6e-14
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	6e-14
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	7e-13
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	8e-12
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	1e-11
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	1e-10
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	4e-10
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	1e-09
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	1e-09
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	3e-09
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	9e-09
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	6e-08
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	2e-07
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	2e-07
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	2e-07
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	2e-07
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	4e-06
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	2e-05
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	6e-04
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	6e-04

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 93.9 bits (233), Expect = 9e-25
 Identities = 30/147 (20%), Positives = 65/147 (44%), Gaps = 16/147 (10%)

Query: 18  KTSNAFLFCCQIDEDLTARI-------NMADAQFSFQQRGRCYYPAWMSPEALQKKPGDR 70
           K++N FL      EDLT +I         +    S Q         WM+PE ++ +  + 
Sbjct: 131 KSNNIFL-----HEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 185

Query: 71  NLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRI----TIPPGISSHLSKL 126
                D+++F ++L+EL T ++P++++   +  + +   G        +       + +L
Sbjct: 186 YSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRL 245

Query: 127 IRICMNEDPGKRPTFDMVLPILDKMKR 153
           +  C+ +   +RP F  +L  ++ + R
Sbjct: 246 MAECLKKKRDERPLFPQILASIELLAR 272

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 88.7 bits (219), Expect = 9e-23
 Identities = 33/139 (23%), Positives = 62/139 (44%), Gaps = 6/139 (4%)

Query: 18  KTSNAFL---FCCQIDEDLTARINMADAQFSFQQRGRCYYPAWMSPEALQKKPGDRNLEA 74
              N  +     C++ +   +R+   D + ++   G      W +PEA+  +   +   A
Sbjct: 137 AARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYR---KFTSA 193

Query: 75  CDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNED 134
            D+WSF +++WE+ T              MK   +G R+  P    S + +L+  C  ++
Sbjct: 194 SDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFRLPTPMDCPSAIYQLMMQCWQQE 253

Query: 135 PGKRPTFDMVLPILDKMKR 153
             +RP F  ++ ILDK+ R
Sbjct: 254 RARRPKFADIVSILDKLIR 272

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 86.6 bits (214), Expect = 5e-22
 Identities = 33/128 (25%), Positives = 62/128 (48%), Gaps = 7/128 (5%)

Query: 29  IDEDLTARINM--ADAQFSFQQRGRCYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWE 86
           + ED  A+++      + S  Q        W +PEAL++K         D+WSF +LLWE
Sbjct: 136 VSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFS---TKSDVWSFGILLWE 192

Query: 87  LATR-EVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVL 145
           + +   VP+  +   +V  +V  +G ++  P G    + ++++ C + D   RP+F  + 
Sbjct: 193 IYSFGRVPYPRIPLKDVVPRV-EKGYKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLR 251

Query: 146 PILDKMKR 153
             L+ +K 
Sbjct: 252 EQLEHIKT 259

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 87.1 bits (215), Expect = 6e-22
 Identities = 33/139 (23%), Positives = 57/139 (41%), Gaps = 9/139 (6%)

Query: 18  KTSNAFLF----CCQIDEDLTARINMADAQFSFQQRGRCYYPAWMSPEALQKKPGDRNLE 73
              N  L         D  L   +   +      + G      WM+ E+LQ +       
Sbjct: 157 AARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFT---T 213

Query: 74  ACDMWSFAVLLWELATR-EVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMN 132
             D+WSF VLLWEL TR   P+ D+   ++ + + L+G R+  P      L +++  C +
Sbjct: 214 KSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYL-LQGRRLLQPEYCPDPLYEVMLKCWH 272

Query: 133 EDPGKRPTFDMVLPILDKM 151
                RP+F  ++  +  +
Sbjct: 273 PKAEMRPSFSELVSRISAI 291

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 83.2 bits (205), Expect = 1e-20
 Identities = 35/141 (24%), Positives = 61/141 (43%), Gaps = 16/141 (11%)

Query: 18  KTSNAFLFCCQIDEDLTARI------NMADAQFSFQQRGRCYYPAWMSPEALQKKPGDRN 71
           + +N       + E+L  ++       + +      ++G  +   W +PEA         
Sbjct: 140 RAAN-----ILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFT-- 192

Query: 72  LEACDMWSFAVLLWELATR-EVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRIC 130
               D+WSF +LL EL T+  VP+  +   EV  +V   G R+  PP     L  L+  C
Sbjct: 193 -IKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQV-ERGYRMPCPPECPESLHDLMCQC 250

Query: 131 MNEDPGKRPTFDMVLPILDKM 151
             ++P +RPTF+ +   L+  
Sbjct: 251 WRKEPEERPTFEYLQAFLEDY 271

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 82.9 bits (204), Expect = 2e-20
 Identities = 27/135 (20%), Positives = 51/135 (37%), Gaps = 12/135 (8%)

Query: 27  CQIDEDLTARIN-------MADAQFSFQQRGRCYYPAWMSPEALQKKPGDRNLEACDMWS 79
             +      +I        +   +  +   G      WM+ E++  +         D+WS
Sbjct: 142 VLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYT---HQSDVWS 198

Query: 80  FAVLLWELATR-EVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKR 138
           + V +WEL T    P+  +   E+   +  +G R+  PP  +  +  ++  C   D   R
Sbjct: 199 YGVTVWELMTFGSKPYDGIPASEI-SSILEKGERLPQPPICTIDVYMIMVKCWMIDADSR 257

Query: 139 PTFDMVLPILDKMKR 153
           P F  ++    KM R
Sbjct: 258 PKFRELIIEFSKMAR 272

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 82.4 bits (203), Expect = 3e-20
 Identities = 28/131 (21%), Positives = 46/131 (35%), Gaps = 10/131 (7%)

Query: 18  KTSNAFLFCCQIDEDLTARINMAD---AQFSFQQRGRCYYPAWMSPEALQKKPGDRNLEA 74
           K  N  L      E    ++   D   A            P WM+PE +      +    
Sbjct: 142 KAGNILL-----SEPGLVKL--GDFGSASIMAPANSFVGTPYWMAPEVILAMDEGQYDGK 194

Query: 75  CDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNED 134
            D+WS  +   ELA R+ P  ++  M     +A            S +    +  C+ + 
Sbjct: 195 VDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHWSEYFRNFVDSCLQKI 254

Query: 135 PGKRPTFDMVL 145
           P  RPT +++L
Sbjct: 255 PQDRPTSEVLL 265

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 80.9 bits (199), Expect = 7e-20
 Identities = 29/115 (25%), Positives = 47/115 (40%), Gaps = 5/115 (4%)

Query: 35  ARINMADAQFSFQQRGRCYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWE-LATREVP 93
           ++   AD  +   Q    +   W +PE +            D+WSF VL+WE  +  + P
Sbjct: 154 SKALRADENYYKAQTHGKWPVKWYAPECINYYKFS---SKSDVWSFGVLMWEAFSYGQKP 210

Query: 94  FADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPIL 148
           +  +   EV   +  +G R+  P G    +  L+ +C   D   RP F  V   L
Sbjct: 211 YRGMKGSEVTAML-EKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRL 264

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 81.2 bits (200), Expect = 8e-20
 Identities = 22/95 (23%), Positives = 41/95 (43%), Gaps = 4/95 (4%)

Query: 52  CYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEG- 110
              P WM+PE + +K         D+WS  ++  E+   E P+ +  P+     +A  G 
Sbjct: 177 VGTPYWMAPEVVTRKAYG---PKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGT 233

Query: 111 LRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVL 145
             +  P  +S+     +  C++ D  KR +   +L
Sbjct: 234 PELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELL 268

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 80.4 bits (198), Expect = 9e-20
 Identities = 28/97 (28%), Positives = 45/97 (46%), Gaps = 4/97 (4%)

Query: 49  RGRCYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVAL 108
           +     P +MSPE + +   +   E  D+WS   LL+EL     PF   +  E+  K+  
Sbjct: 172 KAFVGTPYYMSPEQMNRMSYN---EKSDIWSLGCLLYELCALMPPFTAFSQKELAGKI-R 227

Query: 109 EGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVL 145
           EG    IP   S  L+++I   +N     RP+ + +L
Sbjct: 228 EGKFRRIPYRYSDELNEIITRMLNLKDYHRPSVEEIL 264

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 80.1 bits (197), Expect = 1e-19
 Identities = 28/132 (21%), Positives = 49/132 (37%), Gaps = 9/132 (6%)

Query: 26  CCQIDEDLTARI------NMADAQFSFQQRGRCYYPAWMSPEALQKKPGDRNLEACDMWS 79
            C + E+   ++                  G  +   W SPE              D+WS
Sbjct: 131 NCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYS---SKSDVWS 187

Query: 80  FAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRP 139
           F VL+WE+ +      +       ++    G R+  P   S+H+ +++  C  E P  RP
Sbjct: 188 FGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLASTHVYQIMNHCWKERPEDRP 247

Query: 140 TFDMVLPILDKM 151
            F  +L  L ++
Sbjct: 248 AFSRLLRQLAEI 259

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 80.2 bits (197), Expect = 1e-19
 Identities = 35/136 (25%), Positives = 51/136 (37%), Gaps = 9/136 (6%)

Query: 18  KTSNAFLFCCQ----IDEDLTARINMADAQFSFQQRGRCYYPAWMSPEALQKKPGDRNLE 73
              N  L         D  L  R    +      Q  R    AW +PE+L+ +       
Sbjct: 138 AARNLLLATRDLVKIGDFGL-MRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFS---H 193

Query: 74  ACDMWSFAVLLWELATR-EVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMN 132
           A D W F V LWE+ T  + P+  L   ++  K+  EG R+  P      +  ++  C  
Sbjct: 194 ASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWA 253

Query: 133 EDPGKRPTFDMVLPIL 148
             P  RPTF  +   L
Sbjct: 254 HKPEDRPTFVALRDFL 269

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 80.6 bits (198), Expect = 1e-19
 Identities = 33/138 (23%), Positives = 60/138 (43%), Gaps = 15/138 (10%)

Query: 27  CQIDEDLTARI----------NMADAQFSFQQRGRCYYPAWMSPEALQKKPGDRNLEACD 76
             ++ +L  ++          +           G      W +PEA+Q +       A D
Sbjct: 159 ILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFT---SASD 215

Query: 77  MWSFAVLLWELATR-EVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDP 135
           +WS+ +++WE+ +  E P+ D+T  +V   +  +  R+  P    S L +L+  C  +D 
Sbjct: 216 VWSYGIVMWEVMSYGERPYWDMTNQDVINAI-EQDYRLPPPMDCPSALHQLMLDCWQKDR 274

Query: 136 GKRPTFDMVLPILDKMKR 153
             RP F  ++  LDKM R
Sbjct: 275 NHRPKFGQIVNTLDKMIR 292

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 80.0 bits (197), Expect = 1e-19
 Identities = 23/132 (17%), Positives = 57/132 (43%), Gaps = 12/132 (9%)

Query: 18  KTSNAFLFCCQIDEDLTARI---NMADAQFSFQQRGRCYYPAWMSPEALQKKPGDRNLEA 74
           K  N F+         + +I    +A  + +   +     P +M+PE  ++K      E+
Sbjct: 141 KCDNIFIT----GPTGSVKIGDLGLATLKRASFAKAVIGTPEFMAPEMYEEKYD----ES 192

Query: 75  CDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLR-ITIPPGISSHLSKLIRICMNE 133
            D+++F + + E+AT E P+++        +    G++  +        + ++I  C+ +
Sbjct: 193 VDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVKEIIEGCIRQ 252

Query: 134 DPGKRPTFDMVL 145
           +  +R +   +L
Sbjct: 253 NKDERYSIKDLL 264

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 79.9 bits (196), Expect = 2e-19
 Identities = 32/133 (24%), Positives = 57/133 (42%), Gaps = 12/133 (9%)

Query: 27  CQIDEDLTARI-------NMADAQFSFQQRGRCYYPAWMSPEALQKKPGDRNLEACDMWS 79
           C + E++  +I       N+  A +            WM PE++            D+W+
Sbjct: 171 CLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYT---TESDVWA 227

Query: 80  FAVLLWELATR-EVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKR 138
           + V+LWE+ +    P+  +   EV   V  +G  +  P      L  L+R+C ++ P  R
Sbjct: 228 YGVVLWEIFSYGLQPYYGMAHEEVIYYV-RDGNILACPENCPLELYNLMRLCWSKLPADR 286

Query: 139 PTFDMVLPILDKM 151
           P+F  +  IL +M
Sbjct: 287 PSFCSIHRILQRM 299

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 79.3 bits (195), Expect = 3e-19
 Identities = 36/139 (25%), Positives = 59/139 (42%), Gaps = 12/139 (8%)

Query: 18  KTSNAFLFCCQ----IDEDLTARINMADAQFSFQQRGRCYYPAWMSPEALQKKPGDRNLE 73
           + +N  +         D  L   I   +      + G  +   W +PEA+          
Sbjct: 136 RAANILVSDTLSCKIADFGLARLIEDNE---YTAREGAKFPIKWTAPEAINYGTFT---I 189

Query: 74  ACDMWSFAVLLWELATR-EVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMN 132
             D+WSF +LL E+ T   +P+  +T  EV ++    G R+  P      L +L+R+C  
Sbjct: 190 KSDVWSFGILLTEIVTHGRIPYPGMTNPEV-IQNLERGYRMVRPDNCPEELYQLMRLCWK 248

Query: 133 EDPGKRPTFDMVLPILDKM 151
           E P  RPTFD +  +L+  
Sbjct: 249 ERPEDRPTFDYLRSVLEDF 267

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 79.5 bits (195), Expect = 5e-19
 Identities = 33/130 (25%), Positives = 57/130 (43%), Gaps = 9/130 (6%)

Query: 29  IDEDLTARINMADAQFSFQQRGR----CYYPAWMSPEALQKKPGDRNLEACDMWSFAVLL 84
           + E+  A+I         +   +         WM+ E+L            D+WS+ VLL
Sbjct: 160 VGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYT---TNSDVWSYGVLL 216

Query: 85  WELATR-EVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDM 143
           WE+ +    P+  +T  E+  K+  +G R+  P      +  L+R C  E P +RP+F  
Sbjct: 217 WEIVSLGGTPYCGMTCAELYEKL-PQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQ 275

Query: 144 VLPILDKMKR 153
           +L  L++M  
Sbjct: 276 ILVSLNRMLE 285

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 78.2 bits (192), Expect = 5e-19
 Identities = 28/126 (22%), Positives = 52/126 (41%), Gaps = 11/126 (8%)

Query: 27  CQIDEDLTARI------NMADAQFSFQQRGRCYYPAWMSPEALQKKPGDRNLEACDMWSF 80
           C +++    ++                  G  +   W  PE L            D+W+F
Sbjct: 131 CLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFS---SKSDIWAF 187

Query: 81  AVLLWELATR-EVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRP 139
            VL+WE+ +  ++P+   T  E    +  +GLR+  P   S  +  ++  C +E   +RP
Sbjct: 188 GVLMWEIYSLGKMPYERFTNSETAEHI-AQGLRLYRPHLASEKVYTIMYSCWHEKADERP 246

Query: 140 TFDMVL 145
           TF ++L
Sbjct: 247 TFKILL 252

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 78.6 bits (193), Expect = 6e-19
 Identities = 30/136 (22%), Positives = 51/136 (37%), Gaps = 10/136 (7%)

Query: 18  KTSNAFL----FCCQIDEDLTARINMADAQFSFQQRGRCYYPAWMSPEALQKKPGDRNLE 73
              N  L    +    D  L ++   AD  +   +    +   W +PE +  +       
Sbjct: 136 AARNVLLVNRHYAKISDFGL-SKALGADDSYYTARSAGKWPLKWYAPECINFRKFS---S 191

Query: 74  ACDMWSFAVLLWE-LATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMN 132
             D+WS+ V +WE L+  + P+  +   EV   +  +G R+  PP     L  L+  C  
Sbjct: 192 RSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFI-EQGKRMECPPECPPELYALMSDCWI 250

Query: 133 EDPGKRPTFDMVLPIL 148
                RP F  V   +
Sbjct: 251 YKWEDRPDFLTVEQRM 266

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 78.2 bits (192), Expect = 1e-18
 Identities = 29/142 (20%), Positives = 54/142 (38%), Gaps = 14/142 (9%)

Query: 18  KTSNAFLFCCQIDEDLTARI------NMADAQFSFQQRGRCYYPAWMSPEALQKKPGDRN 71
              N     C + E+   ++       +          G  +   W +PE+L        
Sbjct: 142 AARN-----CLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFS-- 194

Query: 72  LEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICM 131
               D+W+F VLLWE+AT  +       +    ++  +  R+  P G    + +L+R C 
Sbjct: 195 -IKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACW 253

Query: 132 NEDPGKRPTFDMVLPILDKMKR 153
             +P  RP+F  +    + M +
Sbjct: 254 QWNPSDRPSFAEIHQAFETMFQ 275

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 78.1 bits (192), Expect = 1e-18
 Identities = 27/97 (27%), Positives = 44/97 (45%), Gaps = 3/97 (3%)

Query: 52  CYYPAWMSPEALQKKPGDRNL--EACDMWSFAVLLWELATREVPFADLTPMEVGMKVA-L 108
              P WM+PE +  +           D+WS  + L E+A  E P  +L PM V +K+A  
Sbjct: 171 IGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKS 230

Query: 109 EGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVL 145
           E   +  P   SS+    ++ C+ ++   R T   +L
Sbjct: 231 EPPTLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLL 267

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 77.3 bits (190), Expect = 1e-18
 Identities = 24/94 (25%), Positives = 40/94 (42%), Gaps = 5/94 (5%)

Query: 52  CYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGL 111
           C    ++ PE ++ +  D   E  D+WS  VL +E    + PF   T  E   ++    +
Sbjct: 165 CGTLDYLPPEMIEGRMHD---EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI--SRV 219

Query: 112 RITIPPGISSHLSKLIRICMNEDPGKRPTFDMVL 145
             T P  ++     LI   +  +P +RP    VL
Sbjct: 220 EFTFPDFVTEGARDLISRLLKHNPSQRPMLREVL 253

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 78.3 bits (192), Expect = 1e-18
 Identities = 29/138 (21%), Positives = 56/138 (40%), Gaps = 8/138 (5%)

Query: 18  KTSNAFL---FCCQIDEDLTARINMADAQFSFQQRGRCYYPAWMSPEALQKKPGDRNLEA 74
              N  +      +I +   AR  M+D+ +  +         WM+PE+L +         
Sbjct: 191 AARNVLVTHGKVVKICDFGLARDIMSDSNYVVRG-NARLPVKWMAPESLFEGIYT---IK 246

Query: 75  CDMWSFAVLLWELATR-EVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNE 133
            D+WS+ +LLWE+ +    P+  +       K+   G ++  P   +  +  +++ C   
Sbjct: 247 SDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQNGFKMDQPFYATEEIYIIMQSCWAF 306

Query: 134 DPGKRPTFDMVLPILDKM 151
           D  KRP+F  +   L   
Sbjct: 307 DSRKRPSFPNLTSFLGCQ 324

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 77.6 bits (190), Expect = 2e-18
 Identities = 37/138 (26%), Positives = 62/138 (44%), Gaps = 9/138 (6%)

Query: 18  KTSNAFL---FCCQIDEDLTARINMADAQFSFQQRGRCYYPAWMSPEALQKKPGDRNLEA 74
              N  +      +I +   AR  +    +  +         WM+PEAL  +        
Sbjct: 162 AARNVLVTEDNVMKIADFGLARD-IHHIDYYKKTTNGRLPVKWMAPEALFDRIYT---HQ 217

Query: 75  CDMWSFAVLLWELATR-EVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNE 133
            D+WSF VLLWE+ T    P+  +   E+  K+  EG R+  P   ++ L  ++R C + 
Sbjct: 218 SDVWSFGVLLWEIFTLGGSPYPGVPVEEL-FKLLKEGHRMDKPSNCTNELYMMMRDCWHA 276

Query: 134 DPGKRPTFDMVLPILDKM 151
            P +RPTF  ++  LD++
Sbjct: 277 VPSQRPTFKQLVEDLDRI 294

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 74.0 bits (181), Expect = 3e-17
 Identities = 25/128 (19%), Positives = 48/128 (37%), Gaps = 8/128 (6%)

Query: 18  KTSNAFL---FCCQIDEDLTARINMADAQFSFQQRGRCYYPAWMSPEALQKKPGDRNLEA 74
           K +N  +      ++ +   AR          Q         ++SPE  +    D     
Sbjct: 138 KPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVD---AR 194

Query: 75  CDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRI--TIPPGISSHLSKLIRICMN 132
            D++S   +L+E+ T E PF   +P+ V  +   E          G+S+ L  ++   + 
Sbjct: 195 SDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALA 254

Query: 133 EDPGKRPT 140
           ++P  R  
Sbjct: 255 KNPENRYQ 262

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 73.5 bits (180), Expect = 4e-17
 Identities = 17/101 (16%), Positives = 34/101 (33%), Gaps = 5/101 (4%)

Query: 52  CYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGL 111
                ++SPE L +K      ++ D+W+   ++++L     PF       +  K+    L
Sbjct: 171 VGTAQYVSPELLTEKSAC---KSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKII--KL 225

Query: 112 RITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKMK 152
               P         L+   +  D  KR   + +        
Sbjct: 226 EYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKA 266

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score = 73.2 bits (179), Expect = 1e-16
 Identities = 25/96 (26%), Positives = 33/96 (34%), Gaps = 5/96 (5%)

Query: 52  CYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGL 111
                + +PE  + KP        DMWS  VL + L +   PF      E    V     
Sbjct: 186 TGTAEFAAPEVAEGKPVG---YYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDW 242

Query: 112 RI--TIPPGISSHLSKLIRICMNEDPGKRPTFDMVL 145
            +  +   GIS      IR  +  DP  R T    L
Sbjct: 243 NMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQAL 278

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 72.6 bits (177), Expect = 1e-16
 Identities = 28/148 (18%), Positives = 53/148 (35%), Gaps = 23/148 (15%)

Query: 29  IDEDLTARINMADAQFSFQQRGRCYYPAWMSPEALQKKPGDRNL---EACDMWSFAVLLW 85
            D  L  R + A          R     +M+PE L      ++    +  D+++  ++ W
Sbjct: 150 ADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFW 209

Query: 86  ELATREVPF---------------ADLTPMEVGMKVALEGLRITIPPGISSH-----LSK 125
           E+A R                   +D +  E+   V  + LR  IP    S      ++K
Sbjct: 210 EIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAK 269

Query: 126 LIRICMNEDPGKRPTFDMVLPILDKMKR 153
           ++R C   +   R T   +   L ++ +
Sbjct: 270 IMRECWYANGAARLTALRIKKTLSQLSQ 297

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 72.2 bits (176), Expect = 2e-16
 Identities = 37/134 (27%), Positives = 63/134 (47%), Gaps = 12/134 (8%)

Query: 27  CQIDEDLTARI-------NMADAQFSFQQRGRCYYPAWMSPEALQKKPGDRNLEACDMWS 79
           C + ED T +I       ++ +  +  +         WMSPE+L+           D+WS
Sbjct: 164 CMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFT---TYSDVWS 220

Query: 80  FAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKR 138
           F V+LWE+AT  E P+  L+  +V   V +EG  +  P      L +L+R+C   +P  R
Sbjct: 221 FGVVLWEIATLAEQPYQGLSNEQVLRFV-MEGGLLDKPDNCPDMLFELMRMCWQYNPKMR 279

Query: 139 PTFDMVLPILDKMK 152
           P+F  ++  + +  
Sbjct: 280 PSFLEIISSIKEEM 293

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 71.3 bits (174), Expect = 3e-16
 Identities = 23/104 (22%), Positives = 42/104 (40%), Gaps = 5/104 (4%)

Query: 47  QQRGRCYYPAWMSPEALQKKPGDRNL---EACDMWSFAVLLWELATREVPFADLTPMEVG 103
           + R  C  P++++PE ++    D +    +  DMWS  V+++ L     PF     M + 
Sbjct: 165 KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLML 224

Query: 104 MKVALEGLRITIP--PGISSHLSKLIRICMNEDPGKRPTFDMVL 145
             +     +   P     S  +  L+   +   P KR T +  L
Sbjct: 225 RMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEAL 268

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 71.0 bits (173), Expect = 5e-16
 Identities = 25/114 (21%), Positives = 50/114 (43%), Gaps = 4/114 (3%)

Query: 39  MADAQFSFQQRGRCYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVP-FADL 97
           + +      +        WM+PE++            D+WS+ + LWEL +     +  +
Sbjct: 195 IKNDSNYVVKGNARLPVKWMAPESIFNCVYT---FESDVWSYGIFLWELFSLGSSPYPGM 251

Query: 98  TPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKM 151
                  K+  EG R+  P    + +  +++ C + DP KRPTF  ++ +++K 
Sbjct: 252 PVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQ 305

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score = 70.9 bits (173), Expect = 6e-16
 Identities = 21/96 (21%), Positives = 35/96 (36%), Gaps = 5/96 (5%)

Query: 52  CYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGL 111
                + +PE + ++P        DMW+  VL + L +   PFA    +E    V     
Sbjct: 189 TATAEFAAPEIVDREPVG---FYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDW 245

Query: 112 RI--TIPPGISSHLSKLIRICMNEDPGKRPTFDMVL 145
                    +S      I+  + ++P KR T    L
Sbjct: 246 EFDEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDAL 281

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 70.1 bits (171), Expect = 1e-15
 Identities = 28/97 (28%), Positives = 41/97 (42%), Gaps = 5/97 (5%)

Query: 51  RCYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEG 110
            C  P +++PE L +KP     +A D WS  V+ + L     PF D    ++  ++    
Sbjct: 169 ACGTPGYVAPEVLAQKPYS---KAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAE 225

Query: 111 LRITIP--PGISSHLSKLIRICMNEDPGKRPTFDMVL 145
                P    IS      IR  M +DP KR T +  L
Sbjct: 226 YEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQAL 262

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 69.0 bits (168), Expect = 2e-15
 Identities = 28/124 (22%), Positives = 48/124 (38%), Gaps = 8/124 (6%)

Query: 29  IDEDLTARINMADAQFSFQQRGRCYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWELA 88
            D  L+  +  +    + + +    + A  S          R   A D+W F V +WE+ 
Sbjct: 150 GDFGLSRYMEDSTYYKASKGKLPIKWMAPESIN------FRRFTSASDVWMFGVCMWEIL 203

Query: 89  TR-EVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPI 147
                PF  +   +V  ++   G R+ +PP     L  L+  C   DP +RP F  +   
Sbjct: 204 MHGVKPFQGVKNNDVIGRI-ENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQ 262

Query: 148 LDKM 151
           L  +
Sbjct: 263 LSTI 266

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 68.7 bits (167), Expect = 3e-15
 Identities = 14/115 (12%), Positives = 31/115 (26%), Gaps = 9/115 (7%)

Query: 43  QFSFQQRGRCYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEV 102
               +++       +MS      +   R     D+ +   +        +P+  L     
Sbjct: 165 IPYREKKNLSGTARYMSINTHLGREQSR---RDDLEALGHVFMYFLRGSLPWQGLKAATN 221

Query: 103 GMKVALEGLRI------TIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKM 151
             K    G +        +  G      K +    N      P +D +  +  K+
Sbjct: 222 KQKYERIGEKKQSTPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKV 276

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 68.5 bits (167), Expect = 3e-15
 Identities = 19/95 (20%), Positives = 37/95 (38%), Gaps = 3/95 (3%)

Query: 52  CYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALE-G 110
           C    +++PE L+++      E  D+WS  ++L  +   E+P+   +          E  
Sbjct: 166 CGTLPYVAPELLKRREFHA--EPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKK 223

Query: 111 LRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVL 145
             +     I S    L+   + E+P  R T   + 
Sbjct: 224 TYLNPWKKIDSAPLALLHKILVENPSARITIPDIK 258

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 68.2 bits (166), Expect = 4e-15
 Identities = 25/105 (23%), Positives = 39/105 (37%), Gaps = 5/105 (4%)

Query: 43  QFSFQQRGRCYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEV 102
            F  + +     P +++PE +  +P        DMWS  V+ + L +   PF   T  E 
Sbjct: 168 DFGNEFKNIFGTPEFVAPEIVNYEPLG---LEADMWSIGVITYILLSGASPFLGDTKQET 224

Query: 103 GMKVALEGLRIT--IPPGISSHLSKLIRICMNEDPGKRPTFDMVL 145
              V+              S+     IR  + +DP KR T    L
Sbjct: 225 LANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL 269

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.8 bits (165), Expect = 8e-15
 Identities = 20/105 (19%), Positives = 33/105 (31%), Gaps = 5/105 (4%)

Query: 43  QFSFQQRGRCYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEV 102
           +     R     P + +PE  Q         A DMWS   L++ L +   PF   T  ++
Sbjct: 155 KPGDNFRLLFTAPEYYAPEVHQHDVVS---TATDMWSLGTLVYVLLSGINPFLAETNQQI 211

Query: 103 GMKVALEGLRIT--IPPGISSHLSKLIRICMNEDPGKRPTFDMVL 145
              +              IS      +   + ++   R T    L
Sbjct: 212 IENIMNAEYTFDEEAFKEISIEAMDFVDRLLVKERKSRMTASEAL 256

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 67.6 bits (164), Expect = 9e-15
 Identities = 12/114 (10%), Positives = 29/114 (25%), Gaps = 9/114 (7%)

Query: 44  FSFQQRGRCYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVG 103
              + +       + S          R     D+ S   +L       +P+  L      
Sbjct: 166 PYRENKNLTGTARYASINTHLGIEQSR---RDDLESLGYVLMYFNLGSLPWQGLKAATKR 222

Query: 104 MKVALEGLRI------TIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKM 151
            K      +        +  G  S  +  +  C +     +P +  +  +   +
Sbjct: 223 QKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNL 276

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.6 bits (164), Expect = 9e-15
 Identities = 32/138 (23%), Positives = 56/138 (40%), Gaps = 8/138 (5%)

Query: 18  KTSNAFL---FCCQIDEDLTARINMADAQFSFQQRGRCYYPAWMSPEALQKKPGDRNLEA 74
              N  L      +I +   AR    D  +  +         WM+PE +  +        
Sbjct: 161 AARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDA-RLPLKWMAPETIFDRVYT---IQ 216

Query: 75  CDMWSFAVLLWELATR-EVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNE 133
            D+WSF VLLWE+ +    P+  +   E   +   EG R+  P   +  + + +  C + 
Sbjct: 217 SDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHG 276

Query: 134 DPGKRPTFDMVLPILDKM 151
           +P +RPTF  ++  L  +
Sbjct: 277 EPSQRPTFSELVEHLGNL 294

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.5 bits (164), Expect = 1e-14
 Identities = 23/106 (21%), Positives = 40/106 (37%), Gaps = 8/106 (7%)

Query: 35  ARINMADAQFSFQQRGRCYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPF 94
            + NM     +    G   Y   ++PE L  +  +    + D WSF VLL+E+   + PF
Sbjct: 150 CKENMLGDAKTNTFCGTPDY---IAPEILLGQKYN---HSVDWWSFGVLLYEMLIGQSPF 203

Query: 95  ADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPT 140
                 E+   + ++      P  +      L+      +P KR  
Sbjct: 204 HGQDEEELFHSIRMD--NPFYPRWLEKEAKDLLVKLFVREPEKRLG 247

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.5 bits (159), Expect = 3e-14
 Identities = 20/95 (21%), Positives = 39/95 (41%), Gaps = 10/95 (10%)

Query: 51  RCYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEG 110
                 +  PE ++      +  +  +WS  +LL+++   ++PF     +  G       
Sbjct: 169 FDGTRVYSPPEWIRYHRY--HGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRG------- 219

Query: 111 LRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVL 145
            ++     +SS    LIR C+   P  RPTF+ + 
Sbjct: 220 -QVFFRQRVSSECQHLIRWCLALRPSDRPTFEEIQ 253

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.5 bits (159), Expect = 6e-14
 Identities = 31/136 (22%), Positives = 53/136 (38%), Gaps = 11/136 (8%)

Query: 18  KTSNAFLFCCQIDE--DLTARINMADAQFSFQQRGRCYYPAWMSPEALQKKPGDRNLEAC 75
           K  N      + +    LT      +          CY P +++PE L  +  D   ++C
Sbjct: 138 KPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYD---KSC 194

Query: 76  DMWSFAVLLWELATREVPFADLTPMEV--GMKVALEGLRITIP----PGISSHLSKLIRI 129
           DMWS  V+++ L     PF     + +  GMK  +   +   P      +S  +  LIR 
Sbjct: 195 DMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRN 254

Query: 130 CMNEDPGKRPTFDMVL 145
            +  +P +R T    +
Sbjct: 255 LLKTEPTQRMTITEFM 270

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 65.1 bits (158), Expect = 6e-14
 Identities = 23/90 (25%), Positives = 42/90 (46%), Gaps = 5/90 (5%)

Query: 51  RCYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEG 110
            C  P +++PE +  KP +   ++ D WSF +L++E+     PF D   M+   K+ L  
Sbjct: 161 LCGTPDYIAPEVVSTKPYN---KSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKI-LNA 216

Query: 111 LRITIPPGISSHLSKLIRICMNEDPGKRPT 140
             +  PP  +  +  L+   +  D  +R  
Sbjct: 217 -ELRFPPFFNEDVKDLLSRLITRDLSQRLG 245

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 62.2 bits (150), Expect = 7e-13
 Identities = 25/114 (21%), Positives = 42/114 (36%), Gaps = 6/114 (5%)

Query: 29  IDEDLTARINMADAQFSFQQRGRCYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWELA 88
            D  L+      + + ++   G   Y A                +A D WS  VL++EL 
Sbjct: 171 TDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHD----KAVDWWSLGVLMYELL 226

Query: 89  TREVPFADLTPMEVGMKVALEGLR--ITIPPGISSHLSKLIRICMNEDPGKRPT 140
           T   PF          +++   L+     P  +S+    LI+  + +DP KR  
Sbjct: 227 TGASPFTVDGEKNSQAEISRRILKSEPPYPQEMSALAKDLIQRLLMKDPKKRLG 280

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.4 bits (143), Expect = 8e-12
 Identities = 20/90 (22%), Positives = 38/90 (42%), Gaps = 5/90 (5%)

Query: 51  RCYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEG 110
            C  P +++PE L+         A D W   V+++E+    +PF +     +   + +E 
Sbjct: 165 FCGTPEYLAPEVLEDNDYG---RAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILME- 220

Query: 111 LRITIPPGISSHLSKLIRICMNEDPGKRPT 140
             I  P  +S     L+   + +DP +R  
Sbjct: 221 -EIRFPRTLSPEAKSLLAGLLKKDPKQRLG 249

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 58.6 bits (141), Expect = 1e-11
 Identities = 18/90 (20%), Positives = 33/90 (36%), Gaps = 3/90 (3%)

Query: 52  CYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVG-MKVALEG 110
                +M+PE LQK        + D +S   +L++L     PF      +   +      
Sbjct: 166 VGTHGYMAPEVLQKGVAYD--SSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLT 223

Query: 111 LRITIPPGISSHLSKLIRICMNEDPGKRPT 140
           + + +P   S  L  L+   +  D  +R  
Sbjct: 224 MAVELPDSFSPELRSLLEGLLQRDVNRRLG 253

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 55.6 bits (133), Expect = 1e-10
 Identities = 25/97 (25%), Positives = 44/97 (45%), Gaps = 5/97 (5%)

Query: 43  QFSFQQRGRCYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEV 102
           +   +    C  P  ++PE +  K  +   +A D W+  VL++E+A    PF    P+++
Sbjct: 190 RVKGRTWTLCGTPEALAPEIILSKGYN---KAVDWWALGVLIYEMAAGYPPFFADQPIQI 246

Query: 103 GMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRP 139
             K+     ++  P   SS L  L+R  +  D  KR 
Sbjct: 247 YEKIVSG--KVRFPSHFSSDLKDLLRNLLQVDLTKRF 281

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.3 bits (130), Expect = 4e-10
 Identities = 22/141 (15%), Positives = 37/141 (26%), Gaps = 45/141 (31%)

Query: 47  QQRGRCYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGM-- 104
                    ++MSPE LQ           D+WS  + L E+A    P       E+ +  
Sbjct: 159 MANSFVGTRSYMSPERLQGTHYS---VQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMF 215

Query: 105 KVALEGLRITIPPG----------------------------------------ISSHLS 124
              +EG     PP                                          S    
Sbjct: 216 GCQVEGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQ 275

Query: 125 KLIRICMNEDPGKRPTFDMVL 145
             +  C+ ++P +R     ++
Sbjct: 276 DFVNKCLIKNPAERADLKQLM 296

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.3 bits (127), Expect = 1e-09
 Identities = 19/126 (15%), Positives = 36/126 (28%), Gaps = 30/126 (23%)

Query: 55  PAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRIT 114
             + +PE L +          D+WS   +  E+  R+  F   + ++   K+        
Sbjct: 179 LWYRAPEVLLQSSYA---TPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPG 235

Query: 115 -------------------------IPPGISSHLSKLIRICMNEDPGKRPTFDMVL--PI 147
                                        I      L+  C+  +P KR +    L  P 
Sbjct: 236 EEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPY 295

Query: 148 LDKMKR 153
              ++R
Sbjct: 296 FQDLER 301

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.9 bits (126), Expect = 1e-09
 Identities = 18/122 (14%), Positives = 34/122 (27%), Gaps = 29/122 (23%)

Query: 51  RCYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEG 110
                 + +PE L          A D+WS   +  E+ TR   F   + ++   ++    
Sbjct: 162 EVVTLWYRAPEILLGCK--YYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL 219

Query: 111 LRIT---------------------------IPPGISSHLSKLIRICMNEDPGKRPTFDM 143
                                          + P +      L+   ++ DP KR +   
Sbjct: 220 GTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKA 279

Query: 144 VL 145
            L
Sbjct: 280 AL 281

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.1 bits (124), Expect = 3e-09
 Identities = 19/140 (13%), Positives = 39/140 (27%), Gaps = 31/140 (22%)

Query: 35  ARINMADAQFSFQQRGRCYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPF 94
           AR+   D   +           + +PE +    G    ++ D+WS   +L E+ +    F
Sbjct: 156 ARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYT--KSIDIWSVGCILAEMLSNRPIF 213

Query: 95  ADLTPMEVGMKVALEGLRIT-----------------------------IPPGISSHLSK 125
                ++    +       +                             + P   S    
Sbjct: 214 PGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALD 273

Query: 126 LIRICMNEDPGKRPTFDMVL 145
           L+   +  +P KR   +  L
Sbjct: 274 LLDKMLTFNPHKRIEVEQAL 293

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score = 50.7 bits (120), Expect = 9e-09
 Identities = 15/128 (11%), Positives = 32/128 (25%), Gaps = 29/128 (22%)

Query: 45  SFQQRGRCYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGM 104
             +         + +P+ L            D+WS   +  E+      F  ++  +  M
Sbjct: 154 VRKYTHEIVTLWYRAPDVLMGSKKYS--TTIDIWSVGCIFAEMVNGTPLFPGVSEADQLM 211

Query: 105 KV---------------------------ALEGLRITIPPGISSHLSKLIRICMNEDPGK 137
           ++                                  +   G+      L+   +  DP +
Sbjct: 212 RIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQ 271

Query: 138 RPTFDMVL 145
           R T    L
Sbjct: 272 RITAKQAL 279

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.9 bits (113), Expect = 6e-08
 Identities = 19/121 (15%), Positives = 31/121 (25%), Gaps = 28/121 (23%)

Query: 51  RCYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEG 110
           +     + +PE L            DMW+   +L EL  R       + ++   ++    
Sbjct: 160 QVVTRWYRAPELLFGARMYG--VGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETL 217

Query: 111 LRIT--------------------------IPPGISSHLSKLIRICMNEDPGKRPTFDMV 144
              T                          I       L  LI+     +P  R T    
Sbjct: 218 GTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQA 277

Query: 145 L 145
           L
Sbjct: 278 L 278

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.9 bits (110), Expect = 2e-07
 Identities = 17/123 (13%), Positives = 36/123 (29%), Gaps = 30/123 (24%)

Query: 51  RCYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEG 110
                 +  P+ L          + DMWS   +  ELA    P      ++  +K     
Sbjct: 161 EVVTLWYRPPDVLFGAKLYS--TSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRL 218

Query: 111 LR----------------------------ITIPPGISSHLSKLIRICMNEDPGKRPTFD 142
           L                             + + P +++    L++  +  +P +R + +
Sbjct: 219 LGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAE 278

Query: 143 MVL 145
             L
Sbjct: 279 EAL 281

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.8 bits (110), Expect = 2e-07
 Identities = 22/147 (14%), Positives = 36/147 (24%), Gaps = 32/147 (21%)

Query: 29  IDEDLTARINMADAQFSFQQRGRCYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWELA 88
            D  L    ++A      +   R     +  PE L  +         D+W    ++ E+ 
Sbjct: 159 ADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYG--PPIDLWGAGCIMAEMW 216

Query: 89  TREVPFADLTPMEVGMKVALEGLRIT------------------------------IPPG 118
           TR       T       ++     IT                                  
Sbjct: 217 TRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYV 276

Query: 119 ISSHLSKLIRICMNEDPGKRPTFDMVL 145
              +   LI   +  DP +R   D  L
Sbjct: 277 RDPYALDLIDKLLVLDPAQRIDSDDAL 303

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.7 bits (110), Expect = 2e-07
 Identities = 17/132 (12%), Positives = 35/132 (26%), Gaps = 31/132 (23%)

Query: 43  QFSFQQRGRCYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEV 102
           Q   +  G      + +PE +         +  D+WS   ++ E+ T +  F     ++ 
Sbjct: 170 QADSEMTGYVVTRWYRAPEVILNWMRYT--QTVDIWSVGCIMAEMITGKTLFKGSDHLDQ 227

Query: 103 GMKVALEGLRI-----------------------------TIPPGISSHLSKLIRICMNE 133
             ++                                    +I    S     L+   +  
Sbjct: 228 LKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVL 287

Query: 134 DPGKRPTFDMVL 145
           D  +R T    L
Sbjct: 288 DAEQRVTAGEAL 299

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.7 bits (110), Expect = 2e-07
 Identities = 14/126 (11%), Positives = 28/126 (22%), Gaps = 29/126 (23%)

Query: 47  QQRGRCYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKV 106
                     + +PE +          + D+WS   +L EL   +  F   + ++  +++
Sbjct: 178 PNVSYICSRYYRAPELIFGATDYT--SSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEI 235

Query: 107 ---------------------------ALEGLRITIPPGISSHLSKLIRICMNEDPGKRP 139
                                                P        L    +   P  R 
Sbjct: 236 IKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARL 295

Query: 140 TFDMVL 145
           T     
Sbjct: 296 TPLEAC 301

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.0 bits (100), Expect = 4e-06
 Identities = 17/132 (12%), Positives = 32/132 (24%), Gaps = 31/132 (23%)

Query: 43  QFSFQQRGRCYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEV 102
               +  G      + +PE +         +  D+WS   ++ EL T    F     ++ 
Sbjct: 170 HTDDEMTGYVATRWYRAPEIMLNWMHYN--QTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 227

Query: 103 GMKVALEGLRIT-----------------------------IPPGISSHLSKLIRICMNE 133
              +                                     +  G +     L+   +  
Sbjct: 228 LKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVL 287

Query: 134 DPGKRPTFDMVL 145
           D  KR T    L
Sbjct: 288 DSDKRITAAQAL 299

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.1 bits (95), Expect = 2e-05
 Identities = 19/102 (18%), Positives = 34/102 (33%), Gaps = 4/102 (3%)

Query: 45  SFQQRGRCYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGM 104
           SF          + +PE +         E  D+WS   ++ E+   ++ F     ++   
Sbjct: 172 SFMMTPYVVTRYYRAPEVILGMGYK---ENVDIWSVGCIMGEMVRHKILFPGRDYIDQWN 228

Query: 105 KVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLP 146
           KV +E L    P  +      +     N       TF  + P
Sbjct: 229 KV-IEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFP 269

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score = 36.7 bits (84), Expect = 6e-04
 Identities = 17/135 (12%), Positives = 29/135 (21%), Gaps = 38/135 (28%)

Query: 47  QQRGRCYYPAWMSPEALQKKPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKV 106
           +   R     +  PE L          + DMWS   +L  +  R+ PF         +  
Sbjct: 185 EYNVRVASRYFKGPELLVDYQMYD--YSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVR 242

Query: 107 ALEGL------------------------------------RITIPPGISSHLSKLIRIC 130
             + L                                           +S      +   
Sbjct: 243 IAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKL 302

Query: 131 MNEDPGKRPTFDMVL 145
           +  D   R T    +
Sbjct: 303 LRYDHQSRLTAREAM 317

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 36.6 bits (83), Expect = 6e-04
 Identities = 16/80 (20%), Positives = 25/80 (31%), Gaps = 6/80 (7%)

Query: 18  KTSNAFLF---CCQIDEDLTARINMADAQFSFQQRGRCYYPAWMSPEALQKKPGDRNLEA 74
           K  N  +      +    +          +            + SPE L   P       
Sbjct: 153 KPENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWG---CG 209

Query: 75  CDMWSFAVLLWELATREVPF 94
            D+WS A L++EL T +  F
Sbjct: 210 ADIWSTACLIFELITGDFLF 229

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	153
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	100.0
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	100.0
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	100.0
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	100.0
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	100.0
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	100.0
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	100.0
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	100.0
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	100.0
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	100.0
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	100.0
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	100.0
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	100.0
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	100.0
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	100.0
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	100.0
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	100.0
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	100.0
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	100.0
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	100.0
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	100.0
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	100.0
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	100.0
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	100.0
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	100.0
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	100.0
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	100.0
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	99.98
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	99.98
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	99.98
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	99.98
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	99.98
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	99.97
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	99.97
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	99.97
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	99.97
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	99.97
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	99.97
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	99.97
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	99.97
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	99.97
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	99.97
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	99.97
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	99.96
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	99.96
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	99.96
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	99.96
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	99.96
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	99.96
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	99.96
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	99.96
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	99.96
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	99.96
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	99.96
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	99.95
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	99.94
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	99.94
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	99.94
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	99.92
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	98.22
d2ppqa1	316	Homoserine kinase ThrB {Agrobacterium tumefaciens	82.42
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	82.01

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.1e-38  Score=208.00  Aligned_cols=147  Identities=18%  Similarity=0.328  Sum_probs=122.3

Q ss_pred             chhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc---------CCcccCCcccCccccccCCCCCCcch
Q psy12581          4 KKIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ---------RGRCYYPAWMSPEALQKKPGDRNLEA   74 (153)
Q Consensus         4 ~~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~---------~~~~~~~~~~~pe~~~~~~~~~~~~~   74 (153)
                      ...-++.|||+++|+|+||++.||+++.++.+||.  |||++...         ....||+.|+|||.+.+.....++.+
T Consensus       112 qi~~gl~yLH~~~ivHrDlKp~NiLl~~~~~~Kl~--DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~~  189 (276)
T d1uwha_         112 QTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIG--DFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQ  189 (276)
T ss_dssp             HHHHHHHHHHHTTCCCSCCCGGGEEEETTSSEEEC--CCCCSCC------------CCCCGGGCCHHHHTTCSSCCCCHH
T ss_pred             HHHHHHHHHhcCCEeccccCHHHEEEcCCCCEEEc--cccceeeccccCCcccccccccCcccCCHHHHhcccCCCCCch
Confidence            34567899999999999999999999999999998  99998322         23478999999999976544457789


Q ss_pred             hhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhcccc----CCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHhh
Q psy12581         75 CDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRI----TIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDK  150 (153)
Q Consensus        75 ~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~~  150 (153)
                      +|+||||+++||+++|+.||.+.............+...    ..+..+++.+.+++.+||..||++|||++++++.|+.
T Consensus       190 sDiwS~Gv~l~el~tg~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~il~~Le~  269 (276)
T d1uwha_         190 SDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILASIEL  269 (276)
T ss_dssp             HHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHHTSCCCCGGGSCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             hhhhhhHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCCCCcchhccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHH
Confidence            999999999999999999998877666655555444322    2456688999999999999999999999999999998


Q ss_pred             hh
Q psy12581        151 MK  152 (153)
Q Consensus       151 ~~  152 (153)
                      +.
T Consensus       270 l~  271 (276)
T d1uwha_         270 LA  271 (276)
T ss_dssp             HH
T ss_pred             HH
Confidence            75

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.8e-36  Score=205.77  Aligned_cols=142  Identities=19%  Similarity=0.291  Sum_probs=124.2

Q ss_pred             chhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc---------CCcccCCcccCccccccCCCCCCcch
Q psy12581          4 KKIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ---------RGRCYYPAWMSPEALQKKPGDRNLEA   74 (153)
Q Consensus         4 ~~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~---------~~~~~~~~~~~pe~~~~~~~~~~~~~   74 (153)
                      ...-++.|||+++|+|+||++.||+++.++.+||.  |||++...         ....+|+.|+|||.+.+.   .++.+
T Consensus       172 qi~~gl~yLH~~~IiHRDlKp~Nill~~~~~~Kl~--DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~---~~~~~  246 (325)
T d1rjba_         172 QVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKIC--DFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEG---IYTIK  246 (325)
T ss_dssp             HHHHHHHHHHHTTEEETTCSGGGEEEETTTEEEEC--CCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHC---CCCHH
T ss_pred             HHHHHHHHHHhCCeeeccCchhccccccCCeEEEe--eccccccccCCCceeeeccccCCCccCChHHHcCC---CCCcc
Confidence            44568899999999999999999999999999998  99998332         234578999999998764   45689


Q ss_pred             hhHHHHHHHHHHHHh-CCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHhh
Q psy12581         75 CDMWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDK  150 (153)
Q Consensus        75 ~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~~  150 (153)
                      +|+||+|+++||+++ |..||.+.........++..+.+++.|..+++.+.+++.+||+.||++|||+++|++.|..
T Consensus       247 ~DiwS~Gvil~emlt~g~~Pf~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~  323 (325)
T d1rjba_         247 SDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGC  323 (325)
T ss_dssp             HHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             eeccchhHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCCCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHhC
Confidence            999999999999997 8999988777777777777877888888999999999999999999999999999999964

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.1e-36  Score=202.02  Aligned_cols=144  Identities=22%  Similarity=0.343  Sum_probs=119.6

Q ss_pred             chhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc---------CCcccCCcccCccccccCCCCCCcch
Q psy12581          4 KKIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ---------RGRCYYPAWMSPEALQKKPGDRNLEA   74 (153)
Q Consensus         4 ~~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~---------~~~~~~~~~~~pe~~~~~~~~~~~~~   74 (153)
                      ...-++.|||+++|.|+||++.||+++.++.+||+  |||++...         ....||+.|+|||.+.+.   .++.+
T Consensus       142 qi~~gl~ylH~~~ivHrDlKp~NILl~~~~~~Kl~--DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~---~~~~~  216 (299)
T d1ywna1         142 QVAKGMEFLASRKCIHRDLAARNILLSEKNVVKIC--DFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDR---VYTIQ  216 (299)
T ss_dssp             HHHHHHHHHHHTTCCCSCCCGGGEEECGGGCEEEC--C------CCSCTTSCCTTSCCCGGGGCCHHHHHHC---CCCHH
T ss_pred             HHHHHHHHHHhCCCcCCcCCccceeECCCCcEEEc--cCcchhhccccccccccCceeeCccccchhHhhcC---CCCcc
Confidence            34568899999999999999999999999999999  99998321         234688999999999864   45689


Q ss_pred             hhHHHHHHHHHHHHhC-CCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHhhhh
Q psy12581         75 CDMWSFAVLLWELATR-EVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKMK  152 (153)
Q Consensus        75 ~dv~s~g~~~~~~~~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~~~~  152 (153)
                      +|+||+|+++||+++| ..||.+..........+..+..++.|...++++.+++.+||+.||++|||++++++.|+++.
T Consensus       217 sDiwS~Gvil~ellt~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~eil~~L~~il  295 (299)
T d1ywna1         217 SDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL  295 (299)
T ss_dssp             HHHHHHHHHHHHHHTTSCCSSTTCCCSHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             cceeehHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCCCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence            9999999999999986 56887777666666667777788888889999999999999999999999999999999874

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.4e-36  Score=199.31  Aligned_cols=144  Identities=23%  Similarity=0.355  Sum_probs=116.2

Q ss_pred             chhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc----------CCcccCCcccCccccccCCCCCCcc
Q psy12581          4 KKIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ----------RGRCYYPAWMSPEALQKKPGDRNLE   73 (153)
Q Consensus         4 ~~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~----------~~~~~~~~~~~pe~~~~~~~~~~~~   73 (153)
                      ...-++.|||+++|.|+||++.||+++.++.+||.  |||++...          ....||+.|+|||.+.+.   .++.
T Consensus       118 ~i~~gl~~lH~~~iiHrDlKp~NILl~~~~~~Kl~--DFGla~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~---~~~~  192 (283)
T d1mqba_         118 GIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVS--DFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYR---KFTS  192 (283)
T ss_dssp             HHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEEC--CCCC-----------------CCCGGGSCHHHHHSC---CCCH
T ss_pred             HHHHhhhhccccccccCccccceEEECCCCeEEEc--ccchhhcccCCCccceEeccCCCCccccCHHHHccC---CCCC
Confidence            45568899999999999999999999999999999  99998432          123578899999998764   4568


Q ss_pred             hhhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHhhhh
Q psy12581         74 ACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKMK  152 (153)
Q Consensus        74 ~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~~~~  152 (153)
                      ++|+||||+++||++++..|+............+..+.+++.|..++..+.+++.+||+.||++|||+.++++.|+++.
T Consensus       193 ~sDI~S~Gvil~el~t~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~eil~~L~~l~  271 (283)
T d1mqba_         193 ASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLI  271 (283)
T ss_dssp             HHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHH
T ss_pred             cccccccHHHHHHHHhCCCCccccCCHHHHHHHHhccCCCCCchhhHHHHHHHHHHHCcCCHhHCcCHHHHHHHHHHHh
Confidence            9999999999999999655544433334444555667777888889999999999999999999999999999998763

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.8e-36  Score=197.62  Aligned_cols=143  Identities=24%  Similarity=0.443  Sum_probs=114.1

Q ss_pred             chhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc--------CCcccCCcccCccccccCCCCCCcchh
Q psy12581          4 KKIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ--------RGRCYYPAWMSPEALQKKPGDRNLEAC   75 (153)
Q Consensus         4 ~~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~--------~~~~~~~~~~~pe~~~~~~~~~~~~~~   75 (153)
                      ..+-++.|||++++.|+||++.||+++.++.+||+  |||++...        ....||+.|+|||.+.+.   .++.++
T Consensus       109 qia~gl~~lH~~~iiHrDlKp~Nill~~~~~~Kl~--DFGla~~~~~~~~~~~~~~~gt~~y~aPE~l~~~---~~~~k~  183 (263)
T d1sm2a_         109 DVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVS--DFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFS---RYSSKS  183 (263)
T ss_dssp             HHHHHHHHHHHTTCCCTTCSGGGEEECGGGCEEEC--SCC------------------CTTSCCHHHHTTC---CCCHHH
T ss_pred             HHHHHHHhhhccceeecccchhheeecCCCCeEec--ccchheeccCCCceeecceecCcccCChHHhcCC---CCCchh
Confidence            44567899999999999999999999999999998  99998322        224678899999999864   456899


Q ss_pred             hHHHHHHHHHHHHh-CCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHhhhh
Q psy12581         76 DMWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKMK  152 (153)
Q Consensus        76 dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~~~~  152 (153)
                      |+||||+++||+++ |.+|+......+.... +..+..+..|...++++.+++.+||+.||++|||++++++.|+++.
T Consensus       184 DVwS~Gvil~el~t~~~~~~~~~~~~~~~~~-i~~~~~~~~p~~~~~~l~~li~~cl~~~p~~Rps~~~il~~L~~i~  260 (263)
T d1sm2a_         184 DVWSFGVLMWEVFSEGKIPYENRSNSEVVED-ISTGFRLYKPRLASTHVYQIMNHCWKERPEDRPAFSRLLRQLAEIA  260 (263)
T ss_dssp             HHHHHHHHHHHHHTTSCCTTCSCCHHHHHHH-HHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             hhcchHHHHHHHHHCCCCCCCCCCHHHHHHH-HHhcCCCCCccccCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHH
Confidence            99999999999999 5666665555444443 4455666778889999999999999999999999999999999885

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=1.1e-35  Score=198.72  Aligned_cols=144  Identities=23%  Similarity=0.379  Sum_probs=121.1

Q ss_pred             chhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc--------CCcccCCcccCccccccCCCCCCcchh
Q psy12581          4 KKIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ--------RGRCYYPAWMSPEALQKKPGDRNLEAC   75 (153)
Q Consensus         4 ~~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~--------~~~~~~~~~~~pe~~~~~~~~~~~~~~   75 (153)
                      ...-++.|||+++|.|+||++.||+++.++.+||+  |||++...        ....+++.|+|||.+.+.   .++.++
T Consensus       123 qi~~gL~yLH~~~iiHrDlKp~NILl~~~~~~Kl~--DFG~a~~~~~~~~~~~~~~~g~~~y~aPE~~~~~---~~~~k~  197 (287)
T d1opja_         123 QISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVA--DFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYN---KFSIKS  197 (287)
T ss_dssp             HHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEEC--CCCCTTTCCSSSSEEETTEEECGGGCCHHHHHHC---CCSHHH
T ss_pred             HHHHHHHHHHHCCcccCccccCeEEECCCCcEEEc--cccceeecCCCCceeeccccccccccChHHHcCC---CCCchh
Confidence            45668999999999999999999999999999988  99998432        122477899999998864   456899


Q ss_pred             hHHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHhhhh
Q psy12581         76 DMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKMK  152 (153)
Q Consensus        76 dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~~~~  152 (153)
                      |+||+|+++||+++|..|+............+..+..++.|..+++.+.+++.+||+.||++|||++++++.|+.+.
T Consensus       198 DiwS~Gv~l~ell~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ei~~~L~~~~  274 (287)
T d1opja_         198 DVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMF  274 (287)
T ss_dssp             HHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred             hhhhHHHHHHHHHhCCCCCCCcchHHHHHHHHhcCCCCCCCccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHH
Confidence            99999999999999766665544455555566667777888889999999999999999999999999999998874

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=1.4e-35  Score=199.20  Aligned_cols=143  Identities=25%  Similarity=0.417  Sum_probs=115.9

Q ss_pred             chhhHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccccC------------CcccCCcccCccccccCCCCCC
Q psy12581          4 KKIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQR------------GRCYYPAWMSPEALQKKPGDRN   71 (153)
Q Consensus         4 ~~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~------------~~~~~~~~~~pe~~~~~~~~~~   71 (153)
                      ..+-++.|||++++.|+||++.||+++.++.+||+  |||++....            ...+|+.|+|||.+.+.   .+
T Consensus       136 qia~gl~yLH~~~iiHrDlKp~NILl~~~~~~Kl~--DFGla~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~---~~  210 (299)
T d1jpaa_         136 GIAAGMKYLADMNYVHRDLAARNILVNSNLVCKVS--DFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYR---KF  210 (299)
T ss_dssp             HHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEEC--CC-----------------------CGGGSCHHHHHSC---CC
T ss_pred             HHHHHHHHHhhCCCccCccccceEEECCCCcEEEC--CcccceEccCCCCcceeeecccccCCccccCHHHHhcC---CC
Confidence            44567899999999999999999999999999999  999984321            12467899999998764   45


Q ss_pred             cchhhHHHHHHHHHHHHh-CCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHhh
Q psy12581         72 LEACDMWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDK  150 (153)
Q Consensus        72 ~~~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~~  150 (153)
                      +.++||||||+++||++| |+.||.+....+....+ ..+..++.|..++..+.+++.+||+.||++|||+.++++.|++
T Consensus       211 ~~~sDvwS~Gvvl~el~t~g~~Pf~~~~~~~~~~~i-~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~ei~~~L~~  289 (299)
T d1jpaa_         211 TSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAI-EQDYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDK  289 (299)
T ss_dssp             CHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHH-HTTCCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHH
T ss_pred             CcccccccchHHHHHHHhCCCCCCCCCCHHHHHHHH-HcCCCCCCCccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHH
Confidence            689999999999999998 89999888776655444 4556677788899999999999999999999999999999988


Q ss_pred             hh
Q psy12581        151 MK  152 (153)
Q Consensus       151 ~~  152 (153)
                      +.
T Consensus       290 ~l  291 (299)
T d1jpaa_         290 MI  291 (299)
T ss_dssp             HH
T ss_pred             Hh
Confidence            63

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=8.1e-36  Score=201.05  Aligned_cols=141  Identities=19%  Similarity=0.248  Sum_probs=119.5

Q ss_pred             chhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc---CCcccCCcccCccccccCCCCCCcchhhHHHH
Q psy12581          4 KKIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ---RGRCYYPAWMSPEALQKKPGDRNLEACDMWSF   80 (153)
Q Consensus         4 ~~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~---~~~~~~~~~~~pe~~~~~~~~~~~~~~dv~s~   80 (153)
                      ...-++.|||+++|.|+||++.||+++.++.+||+  |||++...   ....||+.|+|||++.+.....++.++|+||+
T Consensus       123 qi~~aL~yLH~~~iiHrDiKp~NILl~~~~~~Kl~--DFG~a~~~~~~~~~~GT~~Y~APE~~~~~~~~~y~~~~DiwSl  200 (309)
T d1u5ra_         123 GALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLG--DFGSASIMAPANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSL  200 (309)
T ss_dssp             HHHHHHHHHHHTTCBCCCCSGGGEEEETTTEEEEC--CCTTCBSSSSBCCCCSCGGGCCHHHHTTTTSCCBCTHHHHHHH
T ss_pred             HHHHHHHHHHhCCEeccCCCcceEEECCCCCEEEe--ecccccccCCCCccccCccccCHHHHhccCCCCcCchhhhhhH
Confidence            34568899999999999999999999999999998  99998433   44589999999999876444456789999999


Q ss_pred             HHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581         81 AVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus        81 g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      |+++|++++|..||.+.........+.........+..+++.+.+++.+||+.||++|||++++++
T Consensus       201 Gvilyel~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~  266 (309)
T d1u5ra_         201 GITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLK  266 (309)
T ss_dssp             HHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred             HHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHCcCChhHCcCHHHHHh
Confidence            999999999999998887777666666554444445668999999999999999999999999875

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=3.1e-35  Score=197.83  Aligned_cols=145  Identities=25%  Similarity=0.447  Sum_probs=122.1

Q ss_pred             cchhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc---------CCcccCCcccCccccccCCCCCCcc
Q psy12581          3 KKKIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ---------RGRCYYPAWMSPEALQKKPGDRNLE   73 (153)
Q Consensus         3 ~~~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~---------~~~~~~~~~~~pe~~~~~~~~~~~~   73 (153)
                      ....-++.|||+++++|+||+++||+++.++.+||+  |||++...         ....+++.|+|||.+.+.   .++.
T Consensus       147 ~qi~~gl~ylH~~~ivHrDlKp~NILld~~~~~Kl~--DFGls~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~---~~t~  221 (301)
T d1lufa_         147 RQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIA--DFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYN---RYTT  221 (301)
T ss_dssp             HHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEEC--CCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHC---CCCH
T ss_pred             HHHHHHhhhcccCCeEeeEEcccceEECCCCcEEEc--cchhheeccCCccccccCCCCcCcCcCCHHHHccC---CCCh
Confidence            345668899999999999999999999999999998  99998321         234678899999999864   4568


Q ss_pred             hhhHHHHHHHHHHHHhCC-CCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHhhhh
Q psy12581         74 ACDMWSFAVLLWELATRE-VPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKMK  152 (153)
Q Consensus        74 ~~dv~s~g~~~~~~~~g~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~~~~  152 (153)
                      ++||||||+++||+++|. +||.+....+....+ ..+..++.|..+++++.+++.+||+.+|++|||+.+|++.|++|.
T Consensus       222 ksDVwS~Gvvl~ell~~~~~p~~~~~~~e~~~~v-~~~~~~~~p~~~~~~~~~li~~cl~~~P~~RPt~~ev~~~L~~i~  300 (301)
T d1lufa_         222 ESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYV-RDGNILACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMC  300 (301)
T ss_dssp             HHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHH-HTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred             hhhhccchhhHHHHHccCCCCCCCCCHHHHHHHH-HcCCCCCCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhc
Confidence            999999999999999875 678777766665554 455567778889999999999999999999999999999999986


Q ss_pred             C
Q psy12581        153 R  153 (153)
Q Consensus       153 ~  153 (153)
                      +
T Consensus       301 ~  301 (301)
T d1lufa_         301 E  301 (301)
T ss_dssp             C
T ss_pred             C
Confidence            4

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.1e-35  Score=194.23  Aligned_cols=136  Identities=21%  Similarity=0.289  Sum_probs=116.0

Q ss_pred             chhhHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccccC-----CcccCCcccCccccccCCCCCCcchhhHH
Q psy12581          4 KKIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQR-----GRCYYPAWMSPEALQKKPGDRNLEACDMW   78 (153)
Q Consensus         4 ~~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~-----~~~~~~~~~~pe~~~~~~~~~~~~~~dv~   78 (153)
                      ...-++.|||+++|.|+||++.||+++.++.+|+.  |||++....     ...||+.|+|||.+.+..   ++.++|+|
T Consensus       114 qi~~al~~lH~~~ivHrDiKp~Nill~~~~~~kl~--DFG~a~~~~~~~~~~~~Gt~~Y~APE~~~~~~---~~~~~Diw  188 (263)
T d2j4za1         114 ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIA--DFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRM---HDEKVDLW  188 (263)
T ss_dssp             HHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEEC--CCCSCSCCCCCCCEETTEEGGGCCHHHHTTCC---CCTTHHHH
T ss_pred             HHHHHHHHHHHCCeeeeeeccccceecCCCCEeec--ccceeeecCCCcccccCCCCcccCHHHHcCCC---CCchhhhh
Confidence            34567899999999999999999999999999988  999985432     237899999999998753   45899999


Q ss_pred             HHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581         79 SFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus        79 s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      |+|+++|++++|+.||.+.........+...  ....|...++++.+++.+||+.||++|||++++++
T Consensus       189 SlGvilyell~G~~Pf~~~~~~~~~~~i~~~--~~~~p~~~s~~~~~li~~~L~~dp~~R~t~~eil~  254 (263)
T d2j4za1         189 SLGVLCYEFLVGKPPFEANTYQETYKRISRV--EFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLE  254 (263)
T ss_dssp             HHHHHHHHHHHSSCTTCCSSHHHHHHHHHTT--CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             hHhHHHHHHhcCCCCCCCCCHHHHHHHHHcC--CCCCCccCCHHHHHHHHHHccCCHhHCcCHHHHHc
Confidence            9999999999999999887766665555433  44567789999999999999999999999999986

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.3e-35  Score=195.91  Aligned_cols=143  Identities=24%  Similarity=0.427  Sum_probs=117.9

Q ss_pred             chhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc--------CCcccCCcccCccccccCCCCCCcchh
Q psy12581          4 KKIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ--------RGRCYYPAWMSPEALQKKPGDRNLEAC   75 (153)
Q Consensus         4 ~~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~--------~~~~~~~~~~~pe~~~~~~~~~~~~~~   75 (153)
                      ...-++.|||+++|.|+||++.||+++.++.+||+  |||++...        ....+++.|+|||.+.+.   .++.++
T Consensus       117 qi~~gl~~lH~~~ivHrDiKp~NIll~~~~~~Kl~--DFGla~~~~~~~~~~~~~~~gt~~y~APE~~~~~---~~~~~s  191 (272)
T d1qpca_         117 QIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIA--DFGLARLIEDNEYTAREGAKFPIKWTAPEAINYG---TFTIKS  191 (272)
T ss_dssp             HHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEEC--CCTTCEECSSSCEECCTTCCCCTTTSCHHHHHHC---EECHHH
T ss_pred             HHHHHHHHHHhCCcccCccchhheeeecccceeec--cccceEEccCCccccccccCCcccccChHHHhCC---CCCchh
Confidence            44567899999999999999999999999999999  99998432        234678899999998764   355899


Q ss_pred             hHHHHHHHHHHHHhCC-CCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHhhhh
Q psy12581         76 DMWSFAVLLWELATRE-VPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKMK  152 (153)
Q Consensus        76 dv~s~g~~~~~~~~g~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~~~~  152 (153)
                      ||||||+++||++||. +|+......... ..+..+..+..|..++..+.+++.+||+.||++|||++++++.|+++.
T Consensus       192 DvwS~Gvvl~ellt~~~~~~~~~~~~~~~-~~i~~~~~~~~p~~~~~~l~~li~~cl~~~P~~Rpt~~ei~~~L~~~f  268 (272)
T d1qpca_         192 DVWSFGILLTEIVTHGRIPYPGMTNPEVI-QNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFF  268 (272)
T ss_dssp             HHHHHHHHHHHHHTTTCCSSTTCCHHHHH-HHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             hhhhhHHHHHHHHhCCCCCCCCCCHHHHH-HHHHhcCCCCCcccChHHHHHHHHHHcCCCHhHCcCHHHHHHHhhhhh
Confidence            9999999999999954 455554444443 344566677778889999999999999999999999999999998763

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.1e-35  Score=192.73  Aligned_cols=143  Identities=24%  Similarity=0.448  Sum_probs=122.5

Q ss_pred             cchhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc--------CCcccCCcccCccccccCCCCCCcch
Q psy12581          3 KKKIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ--------RGRCYYPAWMSPEALQKKPGDRNLEA   74 (153)
Q Consensus         3 ~~~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~--------~~~~~~~~~~~pe~~~~~~~~~~~~~   74 (153)
                      +...-++.|||+++|.|+||++.||+++.++.+||+  |||++...        ....+|+.|+|||.+.+.   .++.+
T Consensus       107 ~qi~~gl~~LH~~~iiH~dlk~~Nill~~~~~~kl~--DfG~a~~~~~~~~~~~~~~~~t~~y~aPE~~~~~---~~~~k  181 (258)
T d1k2pa_         107 KDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVS--DFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYS---KFSSK  181 (258)
T ss_dssp             HHHHHHHHHHHHTTBCCSCCSGGGEEECTTCCEEEC--CCSSCCBCSSSSCCCCCCSCCCGGGCCHHHHHHC---CCCHH
T ss_pred             HHHHHHHHHHhhcCcccccccceeEEEcCCCcEEEC--cchhheeccCCCceeecccCCCCCcCCcHHhcCC---CCCcc
Confidence            455678999999999999999999999999999988  99998422        234678899999999864   45589


Q ss_pred             hhHHHHHHHHHHHHh-CCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHhhh
Q psy12581         75 CDMWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKM  151 (153)
Q Consensus        75 ~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~~~  151 (153)
                      +|+||||+++||++| |+.||.+....+....+ ..+.++..|...++.+.+++.+||+.||++|||++++++.|.++
T Consensus       182 sDiwS~G~~l~el~t~g~~Pf~~~~~~~~~~~i-~~~~~~~~p~~~~~~l~~li~~cl~~dP~~RPt~~eil~~L~di  258 (258)
T d1k2pa_         182 SDIWAFGVLMWEIYSLGKMPYERFTNSETAEHI-AQGLRLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDV  258 (258)
T ss_dssp             HHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHH-HTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHCC
T ss_pred             eeecccchhhHhHHhcCCCCCCCCCHHHHHHHH-HhCCCCCCcccccHHHHHHHHHHccCCHhHCcCHHHHHHHhhCC
Confidence            999999999999998 89999988877665554 45667778888999999999999999999999999999998764

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.1e-35  Score=195.64  Aligned_cols=143  Identities=22%  Similarity=0.349  Sum_probs=120.4

Q ss_pred             cchhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc----------CCcccCCcccCccccccCCCCCCc
Q psy12581          3 KKKIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ----------RGRCYYPAWMSPEALQKKPGDRNL   72 (153)
Q Consensus         3 ~~~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~----------~~~~~~~~~~~pe~~~~~~~~~~~   72 (153)
                      ...+-++.|||++++.|+||++.||+++.++.+|++  |||++...          ....||+.|+|||.+.+.   .++
T Consensus       114 ~qi~~gl~ylH~~~iiHrDlKp~Nill~~~~~~kl~--DFGla~~~~~~~~~~~~~~~~~gt~~y~APE~l~~~---~~~  188 (277)
T d1xbba_         114 HQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKIS--DFGLSKALRADENYYKAQTHGKWPVKWYAPECINYY---KFS  188 (277)
T ss_dssp             HHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEEC--CCTTCEECCTTCSEEEC----CCCGGGCCHHHHHHC---EEE
T ss_pred             HHHHHHHhhHHhCCcccCCCcchhhcccccCccccc--chhhhhhccccccccccccccCCCceecCchhhcCC---CCC
Confidence            345678999999999999999999999999999998  99998432          123678899999998764   456


Q ss_pred             chhhHHHHHHHHHHHHh-CCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHhhh
Q psy12581         73 EACDMWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKM  151 (153)
Q Consensus        73 ~~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~~~  151 (153)
                      .++|+||||+++||+++ |+.||.+....+... .+..+.+++.|..++.++.+++.+||+.||++|||++++++.|+.+
T Consensus       189 ~~sDiwS~Gv~l~ellt~g~~Pf~~~~~~~~~~-~i~~~~~~~~p~~~~~~~~~li~~cl~~dp~~RPs~~~i~~~L~~~  267 (277)
T d1xbba_         189 SKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTA-MLEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNY  267 (277)
T ss_dssp             HHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHH-HHHTTCCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred             chhhhccchhhhhHHhhCCCCCCCCCCHHHHHH-HHHcCCCCCCCcccCHHHHHHHHHHcCCCHhHCcCHHHHHHHhhCH
Confidence            89999999999999997 899998877665544 3445667778888999999999999999999999999999888764

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.3e-35  Score=195.86  Aligned_cols=144  Identities=24%  Similarity=0.338  Sum_probs=124.1

Q ss_pred             chhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc----------CCcccCCcccCccccccCCCCCCcc
Q psy12581          4 KKIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ----------RGRCYYPAWMSPEALQKKPGDRNLE   73 (153)
Q Consensus         4 ~~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~----------~~~~~~~~~~~pe~~~~~~~~~~~~   73 (153)
                      ...-++.|||+++|.|+||++.||+++.++.+|+.  |||++...          ....++..|+|||.+.+.   .++.
T Consensus       119 qi~~gl~ylH~~~iiHrDikp~NIll~~~~~vkl~--DfGl~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~---~~~~  193 (273)
T d1u46a_         119 QVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIG--DFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTR---TFSH  193 (273)
T ss_dssp             HHHHHHHHHHHTTEECSCCCGGGEEEEETTEEEEC--CCTTCEECCC-CCEEEC-----CCGGGCCHHHHHHC---EEEH
T ss_pred             HHHHHHHHhhhCCEeeeeecHHHhccccccceeec--cchhhhhcccCCCcceecCccccCcccCCHHHHhCC---CCCc
Confidence            34567899999999999999999999999999888  99998432          123567789999999864   4558


Q ss_pred             hhhHHHHHHHHHHHHh-CCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHhhhh
Q psy12581         74 ACDMWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKMK  152 (153)
Q Consensus        74 ~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~~~~  152 (153)
                      ++|+||||+++||+++ |..||.+.+..+....+...+..++.+..++..+.+++.+||..||++|||+.++++.|.+.+
T Consensus       194 ~~Di~S~Gvil~emlt~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~ei~~~L~~~~  273 (273)
T d1u46a_         194 ASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQ  273 (273)
T ss_dssp             HHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTSCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC
T ss_pred             chhhhhhHHHHHHHHhCCCCCCCCcCHHHHHHHHHhCCCCCCCcccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHhcC
Confidence            8999999999999998 899999988888877777777777888889999999999999999999999999999998753

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.7e-35  Score=195.85  Aligned_cols=142  Identities=21%  Similarity=0.293  Sum_probs=120.8

Q ss_pred             chhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc----------CCcccCCcccCccccccCCCCCCcc
Q psy12581          4 KKIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ----------RGRCYYPAWMSPEALQKKPGDRNLE   73 (153)
Q Consensus         4 ~~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~----------~~~~~~~~~~~pe~~~~~~~~~~~~   73 (153)
                      ...-++.|||++++.|+||++.||+++.++.+|+.  |||++...          ....+|+.|+|||.+.+.   .++.
T Consensus       117 qi~~gL~ylH~~~iiHrDlKp~Nill~~~~~~Kl~--DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~  191 (285)
T d1u59a_         117 QVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKIS--DFGLSKALGADDSYYTARSAGKWPLKWYAPECINFR---KFSS  191 (285)
T ss_dssp             HHHHHHHHHHHTTEECCCCSGGGEEEEETTEEEEC--CCTTCEECTTCSCEECCCCSSCCCGGGCCHHHHHHC---EECH
T ss_pred             HHHHHHHHHHhCCeecCcCchhheeeccCCceeec--cchhhhcccccccccccccccccCccccChHHHhCC---CCCc
Confidence            45668899999999999999999999999999998  99998432          233678899999998764   4558


Q ss_pred             hhhHHHHHHHHHHHHh-CCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHhhh
Q psy12581         74 ACDMWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKM  151 (153)
Q Consensus        74 ~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~~~  151 (153)
                      ++||||||+++||+++ |+.||.+....+.... +..+.+++.|..+++++.+++.+||+.||++|||+.++++.|+.+
T Consensus       192 ksDVwS~Gv~l~E~lt~G~~Pf~~~~~~~~~~~-i~~~~~~~~p~~~~~~l~~li~~cl~~~p~~RPs~~~i~~~L~~~  269 (285)
T d1u59a_         192 RSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAF-IEQGKRMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRAC  269 (285)
T ss_dssp             HHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHH-HHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHH
T ss_pred             cchhhcchHHHHHHHhCCCCCCCCCCHHHHHHH-HHcCCCCCCCCcCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence            9999999999999998 8999988776655444 445667778889999999999999999999999999999988754

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.8e-35  Score=194.37  Aligned_cols=137  Identities=20%  Similarity=0.330  Sum_probs=115.5

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc-------CCcccCCcccCccccccCCCCCCcchhhH
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ-------RGRCYYPAWMSPEALQKKPGDRNLEACDM   77 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~-------~~~~~~~~~~~pe~~~~~~~~~~~~~~dv   77 (153)
                      ..-++.|||+++|.|+||++.||+++.+|.+|+.  |||++...       ...+||+.|+|||.+.+.   .++.++|+
T Consensus       125 i~~aL~yLH~~~iiHrDiKp~NILl~~~~~vkl~--DFG~a~~~~~~~~~~~~~~gt~~Y~aPE~~~~~---~~~~~~Di  199 (293)
T d1yhwa1         125 CLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLT--DFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRK---AYGPKVDI  199 (293)
T ss_dssp             HHHHHHHHHHTTEECCCCSGGGEEECTTCCEEEC--CCTTCEECCSTTCCBCCCCSCGGGCCHHHHSSS---CBCTHHHH
T ss_pred             HHHHHHHHHHCCCcccCCcHHHeEECCCCcEeec--cchhheeeccccccccccccCCCccChhhhcCC---CCCchhce
Confidence            3457899999999999999999999999998888  99998432       334799999999999874   34589999


Q ss_pred             HHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhcc-ccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581         78 WSFAVLLWELATREVPFADLTPMEVGMKVALEGL-RITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus        78 ~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      ||+|+++|++++|..||.+.........+..... ..+.+..++..+.+++.+||+.||++|||++++++
T Consensus       200 wSlGvilyemltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~  269 (293)
T d1yhwa1         200 WSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQ  269 (293)
T ss_dssp             HHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHHCSCCCSSGGGSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred             ehHhHHHHHHhhCCCCCCCCCHHHHHHHHHhCCCCCCCCcccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            9999999999999999988776666655554432 34456678999999999999999999999999875

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.4e-34  Score=192.23  Aligned_cols=142  Identities=24%  Similarity=0.406  Sum_probs=115.0

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc--------CCcccCCcccCccccccCCCCCCcchhh
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ--------RGRCYYPAWMSPEALQKKPGDRNLEACD   76 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~--------~~~~~~~~~~~pe~~~~~~~~~~~~~~d   76 (153)
                      ..-++.|||++++.|+||++.||+++.++.+|+.  |||++...        ....+|+.|+|||.+.+.   .++.++|
T Consensus       117 i~~gl~ylH~~~iiHrDlKp~NIll~~~~~~Kl~--DfG~a~~~~~~~~~~~~~~~gt~~y~apE~l~~~---~~~~~~D  191 (273)
T d1mp8a_         117 LSTALAYLESKRFVHRDIAARNVLVSSNDCVKLG--DFGLSRYMEDSTYYKASKGKLPIKWMAPESINFR---RFTSASD  191 (273)
T ss_dssp             HHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEEC--C-------------------CCGGGCCHHHHHHC---CCSHHHH
T ss_pred             HHHHhhhhcccCeeccccchhheeecCCCcEEEc--cchhheeccCCcceeccceecCcccchhhHhccC---CCCCccc
Confidence            4557899999999999999999999999999998  99998432        234678899999999864   4558999


Q ss_pred             HHHHHHHHHHHHh-CCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHhhhh
Q psy12581         77 MWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKMK  152 (153)
Q Consensus        77 v~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~~~~  152 (153)
                      +||+|+++||+++ |.+||.+....+....+. .+..++.|..+++.+.+++.+||..||++|||++++++.|+++.
T Consensus       192 iwSlGvil~e~lt~g~~P~~~~~~~~~~~~i~-~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~ei~~~L~~i~  267 (273)
T d1mp8a_         192 VWMFGVCMWEILMHGVKPFQGVKNNDVIGRIE-NGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTIL  267 (273)
T ss_dssp             HHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHH-TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             cccchHHHHHHHhcCCCCCCCCCHHHHHHHHH-cCCCCCCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHH
Confidence            9999999999987 899998887777665544 45566778889999999999999999999999999999998874

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.2e-34  Score=193.62  Aligned_cols=140  Identities=23%  Similarity=0.304  Sum_probs=117.0

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccc-------cCCcccCCcccCccccccCC--CCCCcchh
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQ-------QRGRCYYPAWMSPEALQKKP--GDRNLEAC   75 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~-------~~~~~~~~~~~~pe~~~~~~--~~~~~~~~   75 (153)
                      ..-++.|||+++|.|+||+++||+++.++.+||+  |||++..       .....||+.|+|||.+....  ...++.++
T Consensus       119 i~~gL~ylH~~~ivHrDiKp~NIll~~~~~~Kl~--DFG~a~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~y~~k~  196 (288)
T d2jfla1         119 TLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLA--DFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKA  196 (288)
T ss_dssp             HHHHHHHHHHTTEECCCCSGGGEEECTTSCEEEC--CCTTCEECHHHHHHHTCCCSCCTTCCHHHHTTCSTTTSSTTTHH
T ss_pred             HHHHHHHHHHCCEEEeecChhheeECCCCCEEEE--echhhhccCCCcccccccccccccCCHHHHhhcccCCCCCChhh
Confidence            4567899999999999999999999999999988  9999832       24568999999999985431  23466899


Q ss_pred             hHHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhcc-ccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581         76 DMWSFAVLLWELATREVPFADLTPMEVGMKVALEGL-RITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus        76 dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      |+||+|+++|++++|+.||.+....+....+..... ....+..+++++.+++.+||+.||++|||++++++
T Consensus       197 DiwSlGvilyemltg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~ell~  268 (288)
T d2jfla1         197 DVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQ  268 (288)
T ss_dssp             HHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHHSCCCCCSSGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             hHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCccccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            999999999999999999998887777666654432 33445678999999999999999999999999975

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.5e-34  Score=191.52  Aligned_cols=136  Identities=21%  Similarity=0.279  Sum_probs=107.4

Q ss_pred             hhhHHhhhhcCC-----CCCCCeeeeeeeeccccchhhccccccccccc-------CCcccCCcccCccccccCCCCCCc
Q psy12581          5 KIVYSFYLNSKK-----SKTSNAFLFCCQIDEDLTARINMADAQFSFQQ-------RGRCYYPAWMSPEALQKKPGDRNL   72 (153)
Q Consensus         5 ~~~~~~~lh~~~-----i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~-------~~~~~~~~~~~pe~~~~~~~~~~~   72 (153)
                      ..-++.|||+++     |.|+||+++||+++.++.+||.  |||++...       ....||+.|+|||.+.+.   .++
T Consensus       118 i~~al~ylH~~~~~~~~IiHrDiKp~NIll~~~~~vkl~--DFG~a~~~~~~~~~~~~~~gt~~Y~APE~l~~~---~~~  192 (269)
T d2java1         118 LTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLG--DFGLARILNHDTSFAKAFVGTPYYMSPEQMNRM---SYN  192 (269)
T ss_dssp             HHHHHHHHHHHCC---------CCGGGEEECTTSCEEEC--CHHHHHHC-----------CCCSCCCHHHHTTC---CCC
T ss_pred             HHHHHHHHHHhcCCCCCEEeCcCchhhcCcCCCCcEEEe--eccceeecccCCCccccCCCCcccCCHHHHcCC---CCC
Confidence            345789999876     9999999999999999999988  99998432       345789999999999764   456


Q ss_pred             chhhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581         73 EACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus        73 ~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      .++|+||+|+++|++++|+.||.+.+..+....+.. +.....|...++++.+++.+||+.||++|||++++++
T Consensus       193 ~~~DIwSlGvilyel~tg~~Pf~~~~~~~~~~~i~~-~~~~~~~~~~s~~l~~li~~~L~~dp~~Rps~~ell~  265 (269)
T d2java1         193 EKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIRE-GKFRRIPYRYSDELNEIITRMLNLKDYHRPSVEEILE  265 (269)
T ss_dssp             HHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHH-TCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             hHHHHHhhCHHHHHHhhCCCCCCCCCHHHHHHHHHc-CCCCCCCcccCHHHHHHHHHHcCCChhHCcCHHHHHh
Confidence            899999999999999999999988776666555443 3344567789999999999999999999999999875

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.8e-34  Score=194.35  Aligned_cols=144  Identities=20%  Similarity=0.341  Sum_probs=120.9

Q ss_pred             cchhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc---------CCcccCCcccCccccccCCCCCCcc
Q psy12581          3 KKKIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ---------RGRCYYPAWMSPEALQKKPGDRNLE   73 (153)
Q Consensus         3 ~~~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~---------~~~~~~~~~~~pe~~~~~~~~~~~~   73 (153)
                      ...+-++.|||+++|+|+||++.||+++.++.+||.  |||++...         ....||+.|+|||.+.+.   .++.
T Consensus       118 ~qi~~gl~yLH~~~iiHrDlKp~NIll~~~~~~kl~--DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~---~~~~  192 (317)
T d1xkka_         118 VQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKIT--DFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR---IYTH  192 (317)
T ss_dssp             HHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEEC--CCSHHHHTTTTCC--------CCTTTSCHHHHHHC---CCCH
T ss_pred             HHHHHHHHHHHHcCcccCcchhhcceeCCCCCeEee--ccccceecccccccccccccccCccccChHHHhcC---CCCh
Confidence            345678999999999999999999999999999998  99998432         123578999999998864   4568


Q ss_pred             hhhHHHHHHHHHHHHh-CCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHhhhh
Q psy12581         74 ACDMWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKMK  152 (153)
Q Consensus        74 ~~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~~~~  152 (153)
                      ++|+||||+++||++| |..||.+....+.. ..+..+.+++.|..++..+.+++.+||+.||++|||+.++++.|+++.
T Consensus       193 ~sDvwS~Gvil~el~t~g~~p~~~~~~~~~~-~~i~~~~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~eil~~l~~~~  271 (317)
T d1xkka_         193 QSDVWSYGVTVWELMTFGSKPYDGIPASEIS-SILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMA  271 (317)
T ss_dssp             HHHHHHHHHHHHHHHTTSCCTTTTSCGGGHH-HHHHHTCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             hhhhhhHHHHHHHHHHCCCCCCCCCCHHHHH-HHHHcCCCCCCCcccCHHHHHHHHHhCCCChhhCcCHHHHHHHHHHHH
Confidence            9999999999999998 78998877655543 445566677888889999999999999999999999999999988763

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.8e-34  Score=190.38  Aligned_cols=144  Identities=24%  Similarity=0.356  Sum_probs=116.3

Q ss_pred             cchhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc--------CCcccCCcccCccccccCCCCCCcch
Q psy12581          3 KKKIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ--------RGRCYYPAWMSPEALQKKPGDRNLEA   74 (153)
Q Consensus         3 ~~~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~--------~~~~~~~~~~~pe~~~~~~~~~~~~~   74 (153)
                      ...+-++.|||+.++.|+||++.||+++.++.+||+  |||++...        ....+|+.|+|||.+...   .++.+
T Consensus       120 ~~i~~gl~~LH~~~ivH~DlKp~NIll~~~~~~kl~--DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~k  194 (285)
T d1fmka3         120 AQIASGMAYVERMNYVHRDLRAANILVGENLVCKVA--DFGLARLIEDNEYTARQGAKFPIKWTAPEAALYG---RFTIK  194 (285)
T ss_dssp             HHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEEC--CCCTTC--------------CCGGGSCHHHHHHC---CCCHH
T ss_pred             HHHHHHHHHHhhhheecccccceEEEECCCCcEEEc--ccchhhhccCCCceeeccccccccccChHHHhCC---CCCcH
Confidence            455678999999999999999999999999999999  99998422        224678999999999764   45589


Q ss_pred             hhHHHHHHHHHHHHhCCCCC-CCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHhhhh
Q psy12581         75 CDMWSFAVLLWELATREVPF-ADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKMK  152 (153)
Q Consensus        75 ~dv~s~g~~~~~~~~g~~p~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~~~~  152 (153)
                      +||||+|+++||+++|..|+ ......+.. ..+..+...+.+..+++++.+++.+||+.||++|||+++|++.|+++.
T Consensus       195 sDI~S~Giil~el~t~~~p~~~~~~~~~~~-~~i~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~~~  272 (285)
T d1fmka3         195 SDVWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYF  272 (285)
T ss_dssp             HHHHHHHHHHHHHHTTTCCSSTTCCHHHHH-HHHHTTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTT
T ss_pred             HhhhcchHHHHHHHhCCCCCCCCCCHHHHH-HHHHhcCCCCCCcccCHHHHHHHHHHcccCHhHCcCHHHHHHHHhhhh
Confidence            99999999999999965554 444444443 344456667778889999999999999999999999999999998753

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.3e-34  Score=188.27  Aligned_cols=136  Identities=15%  Similarity=0.246  Sum_probs=111.1

Q ss_pred             hhhHHhhhhcCC--CCCCCeeeeeeeec-cccchhhccccccccccc-----CCcccCCcccCccccccCCCCCCcchhh
Q psy12581          5 KIVYSFYLNSKK--SKTSNAFLFCCQID-EDLTARINMADAQFSFQQ-----RGRCYYPAWMSPEALQKKPGDRNLEACD   76 (153)
Q Consensus         5 ~~~~~~~lh~~~--i~~~ni~~~~~~~~-~~~~~kl~~~d~g~~~~~-----~~~~~~~~~~~pe~~~~~~~~~~~~~~d   76 (153)
                      ..-++.|||+++  |.|+||++.||+++ +++.+||+  |||++...     ....||+.|+|||.+.+    .++.++|
T Consensus       121 i~~gl~yLH~~~~~IiHrDiKp~NILl~~~~~~~Kl~--DFGla~~~~~~~~~~~~GT~~Y~aPE~~~~----~~~~~~D  194 (270)
T d1t4ha_         121 ILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIG--DLGLATLKRASFAKAVIGTPEFMAPEMYEE----KYDESVD  194 (270)
T ss_dssp             HHHHHHHHHTSSSCCCCSCCCGGGEEESSTTSCEEEC--CTTGGGGCCTTSBEESCSSCCCCCGGGGGT----CCCTHHH
T ss_pred             HHHHHHHHHHCCCCEEeCCcChhhceeeCCCCCEEEe--ecCcceeccCCccCCcccCccccCHHHhCC----CCCCcCc
Confidence            455789999998  99999999999996 57888888  99998432     23479999999999864    3568999


Q ss_pred             HHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhcc-ccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581         77 MWSFAVLLWELATREVPFADLTPMEVGMKVALEGL-RITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus        77 v~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      +||+|+++|++++|+.||.+..........+..+. ....+...++++.+++.+||+.||++|||++|+++
T Consensus       195 IwSlGvilyel~~g~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~ell~  265 (270)
T d1t4ha_         195 VYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLN  265 (270)
T ss_dssp             HHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCCGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             hhhHHHHHHHHHHCCCCCCCcccHHHHHHHHHcCCCCcccCccCCHHHHHHHHHHccCCHhHCcCHHHHhC
Confidence            99999999999999999987665554444443333 23345567899999999999999999999999976

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.9e-34  Score=186.88  Aligned_cols=144  Identities=23%  Similarity=0.413  Sum_probs=119.3

Q ss_pred             cchhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc----CCcccCCcccCccccccCCCCCCcchhhHH
Q psy12581          3 KKKIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ----RGRCYYPAWMSPEALQKKPGDRNLEACDMW   78 (153)
Q Consensus         3 ~~~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~----~~~~~~~~~~~pe~~~~~~~~~~~~~~dv~   78 (153)
                      ....-++.|||++++.|+||.++||+++.++.+|+.  |||++...    ....++..|+|||.+.+.   .++.++|+|
T Consensus       110 ~~i~~al~ylH~~~ivH~dlkp~Nil~~~~~~~kl~--dfg~s~~~~~~~~~~~~~~~y~aPE~l~~~---~~t~~sDIw  184 (262)
T d1byga_         110 LDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVS--DFGLTKEASSTQDTGKLPVKWTAPEALREK---KFSTKSDVW  184 (262)
T ss_dssp             HHHHHHHHHHHHTTCCCSCCSGGGEEECTTSCEEEC--CCCC------------CCTTTSCHHHHHHC---CCCHHHHHH
T ss_pred             HHHHhhccccccCceeccccchHhheecCCCCEeec--ccccceecCCCCccccccccCCChHHHhCC---CCChHHHHH
Confidence            445668899999999999999999999999999998  99998543    234678899999998764   456999999


Q ss_pred             HHHHHHHHHHh-CCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHhhhh
Q psy12581         79 SFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKMK  152 (153)
Q Consensus        79 s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~~~~  152 (153)
                      |||+++||+++ |+.||........... +..+.+++.|..+++++.+++.+||+.||++|||+.++++.|++++
T Consensus       185 SfG~il~el~t~~~~p~~~~~~~~~~~~-i~~~~~~~~~~~~~~~~~~li~~cl~~dP~~Rps~~~l~~~L~~i~  258 (262)
T d1byga_         185 SFGILLWEIYSFGRVPYPRIPLKDVVPR-VEKGYKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIK  258 (262)
T ss_dssp             HHHHHHHHHHTTSCCSCTTSCGGGHHHH-HTTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHCCCCCCCCCCHHHHHHH-HHcCCCCCCCccCCHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHH
Confidence            99999999998 7888877765555444 4456778888899999999999999999999999999999999886

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.9e-34  Score=188.74  Aligned_cols=138  Identities=18%  Similarity=0.180  Sum_probs=110.5

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc---------CCcccCCcccCccccccCCCCCCcchh
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ---------RGRCYYPAWMSPEALQKKPGDRNLEAC   75 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~---------~~~~~~~~~~~pe~~~~~~~~~~~~~~   75 (153)
                      ..-++.|||+++|.|+||++.||+++.++.+||+  |||++...         ...+||+.|+|||.+.+...  .+.++
T Consensus       112 i~~al~ylH~~~IiHrDiKp~NILl~~~~~~KL~--DFG~a~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~--~~~~~  187 (271)
T d1nvra_         112 LMAGVVYLHGIGITHRDIKPENLLLDERDNLKIS--DFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF--HAEPV  187 (271)
T ss_dssp             HHHHHHHHHHTTEECSCCCGGGEEECTTCCEEEC--CCTTCEECEETTEECCBCCCCSCGGGSCTHHHHCSSB--CHHHH
T ss_pred             HHHHHHHHHHcCCccCcccHHHEEECCCCCEEEc--cchhheeeccCCccccccceeeCcCccCHhHhcCCCC--CCCce
Confidence            3457899999999999999999999999998888  99998421         34579999999999876432  24779


Q ss_pred             hHHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhh-ccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581         76 DMWSFAVLLWELATREVPFADLTPMEVGMKVALE-GLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus        76 dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      |+||+|+++|++++|+.||............... ..........++++.+++.+||+.||++|||++++++
T Consensus       188 DiwSlGvilyeml~G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~eil~  259 (271)
T d1nvra_         188 DVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKK  259 (271)
T ss_dssp             HHHHHHHHHHHHHHSSCSCSSSSTTSHHHHHHHTTCTTSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred             eeeHhHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence            9999999999999999999776544433333322 2233333567899999999999999999999999875

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.9e-34  Score=192.60  Aligned_cols=134  Identities=17%  Similarity=0.192  Sum_probs=114.0

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc---------CCcccCCcccCccccccCCCCCCcchh
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ---------RGRCYYPAWMSPEALQKKPGDRNLEAC   75 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~---------~~~~~~~~~~~pe~~~~~~~~~~~~~~   75 (153)
                      ..-++.|||+++|.|+||++.||+++.++.+|+.  |||++...         ...+||+.|+|||++.+.   .++.++
T Consensus       117 i~~al~ylH~~~iiHrDiKp~NIll~~~~~vkl~--DFG~a~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~---~~~~~~  191 (288)
T d1uu3a_         117 IVSALEYLHGKGIIHRDLKPENILLNEDMHIQIT--DFGTAKVLSPESKQARANSFVGTAQYVSPELLTEK---SACKSS  191 (288)
T ss_dssp             HHHHHHHHHHTTEECSCCSGGGEEECTTSCEEEC--CCTTCEECC----------CCCCGGGCCHHHHHTC---CCCHHH
T ss_pred             HHHHHHhhccccEEcCcCCccccccCCCceEEec--ccccceecccCCcccccccccCCccccCceeeccC---CCCccc
Confidence            3557899999999999999999999999999988  99998432         234799999999999865   345899


Q ss_pred             hHHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHH
Q psy12581         76 DMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVL  145 (153)
Q Consensus        76 dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l  145 (153)
                      |+||+|+++|++++|..||.+.+.......+...  ....|...++.+.+++.+||+.||++|||++|++
T Consensus       192 DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~--~~~~p~~~s~~~~~li~~~L~~dP~~R~t~~e~~  259 (288)
T d1uu3a_         192 DLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL--EYDFPEKFFPKARDLVEKLLVLDATKRLGCEEME  259 (288)
T ss_dssp             HHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHTT--CCCCCTTCCHHHHHHHHTTSCSSGGGSTTSGGGT
T ss_pred             ceehhhHHHHHHhhCCCCCCCcCHHHHHHHHHcC--CCCCCccCCHHHHHHHHHHccCCHhHCcCHHHHc
Confidence            9999999999999999999988777766665544  3456778999999999999999999999999864

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.9e-33  Score=189.64  Aligned_cols=145  Identities=26%  Similarity=0.350  Sum_probs=116.5

Q ss_pred             cchhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc-----------CCcccCCcccCccccccCCCCCC
Q psy12581          3 KKKIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ-----------RGRCYYPAWMSPEALQKKPGDRN   71 (153)
Q Consensus         3 ~~~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~-----------~~~~~~~~~~~pe~~~~~~~~~~   71 (153)
                      +..+-++.|||++++.|+||++.||+++.++.+||+  |||++...           ....||+.|++||.+...   .+
T Consensus       137 ~qia~gL~~lH~~~iiHrDLK~~NILl~~~~~~kL~--DFG~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~  211 (311)
T d1r0pa_         137 LQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVA--DFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQ---KF  211 (311)
T ss_dssp             HHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEEC--SSGGGCCTTTTTCCCTTCTTCSSCCGGGSCHHHHHHC---CC
T ss_pred             HHHHHhhhhhcccCcccCCccHHhEeECCCCCEEEe--cccchhhccccccccceecccccccccccChHHHhcC---CC
Confidence            345667899999999999999999999999999998  99998432           123578899999998764   45


Q ss_pred             cchhhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHhhh
Q psy12581         72 LEACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKM  151 (153)
Q Consensus        72 ~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~~~  151 (153)
                      +.++||||||+++||+++|..||............+..+.++..|...+..+.+++.+||+.||++||++.++++.|+++
T Consensus       212 ~~ksDI~SfGivl~El~t~~~p~~~~~~~~~~~~~i~~g~~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~L~~i  291 (311)
T d1r0pa_         212 TTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI  291 (311)
T ss_dssp             CHHHHHHHHHHHHHHHHTTSCCSCC------CHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             CChhHhhhhHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCCCCcccCcHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence            68999999999999999977766554333333333445567777888999999999999999999999999999999887


Q ss_pred             h
Q psy12581        152 K  152 (153)
Q Consensus       152 ~  152 (153)
                      .
T Consensus       292 ~  292 (311)
T d1r0pa_         292 F  292 (311)
T ss_dssp             H
T ss_pred             H
Confidence            4

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.3e-33  Score=188.51  Aligned_cols=143  Identities=29%  Similarity=0.443  Sum_probs=121.7

Q ss_pred             chhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc---------CCcccCCcccCccccccCCCCCCcch
Q psy12581          4 KKIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ---------RGRCYYPAWMSPEALQKKPGDRNLEA   74 (153)
Q Consensus         4 ~~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~---------~~~~~~~~~~~pe~~~~~~~~~~~~~   74 (153)
                      ..+-++.|||+++++|+||++.||+++.++.+|++  |||++...         ....+++.|+|||.+.+.   .++.+
T Consensus       143 qi~~al~ylH~~~ivHrDiKp~NiLl~~~~~~kl~--dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~---~y~~k  217 (299)
T d1fgka_         143 QVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIA--DFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDR---IYTHQ  217 (299)
T ss_dssp             HHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEEC--STTCCCCGGGCCTTCCCTTSCCGGGGSCHHHHHHC---CCCHH
T ss_pred             HHHHHHHHhhhCCEEeeeecccceeecCCCCeEec--cchhhccccccccccccccCCCChhhhhhhHhcCC---CCCch
Confidence            44567889999999999999999999999999999  99998422         224678899999999764   45699


Q ss_pred             hhHHHHHHHHHHHHh-CCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHhhhh
Q psy12581         75 CDMWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKMK  152 (153)
Q Consensus        75 ~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~~~~  152 (153)
                      +|+||||+++||+++ |..||.+....... ..+..+..++.|..+++.+.+++.+||+.||++|||+.++++.|+++-
T Consensus       218 ~DiwS~Gvvl~ell~~g~~p~~~~~~~~~~-~~i~~~~~~~~p~~~~~~l~~li~~cl~~dP~~Rps~~eil~~L~~i~  295 (299)
T d1fgka_         218 SDVWSFGVLLWEIFTLGGSPYPGVPVEELF-KLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIV  295 (299)
T ss_dssp             HHHHHHHHHHHHHHTTSCCSSTTCCHHHHH-HHHHTTCCCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             hhhHHhHHHHHHhccCCCCCCCCCCHHHHH-HHHHcCCCCCCCccchHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHh
Confidence            999999999999998 78888776665544 445567778888899999999999999999999999999999999873

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.7e-33  Score=189.90  Aligned_cols=144  Identities=27%  Similarity=0.407  Sum_probs=119.4

Q ss_pred             cchhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc------CCcccCCcccCccccccCCCCCCcchhh
Q psy12581          3 KKKIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ------RGRCYYPAWMSPEALQKKPGDRNLEACD   76 (153)
Q Consensus         3 ~~~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~------~~~~~~~~~~~pe~~~~~~~~~~~~~~d   76 (153)
                      .+.+-++.|||++++.|+||++.||+++.++.+||.  |||++...      ....+|..|++||.+.+.   .++.++|
T Consensus       134 ~qia~gl~~lH~~~iiHrDlkp~NIL~~~~~~~kl~--DfG~a~~~~~~~~~~~~~gt~~y~aPE~l~~~---~~~~~sD  208 (309)
T d1fvra_         134 ADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIA--DFGLSRGQEVYVKKTMGRLPVRWMAIESLNYS---VYTTNSD  208 (309)
T ss_dssp             HHHHHHHHHHHHTTEECSCCSGGGEEECGGGCEEEC--CTTCEESSCEECCC----CCTTTCCHHHHHHC---EECHHHH
T ss_pred             HHHHHHHHhhhcCCccccccccceEEEcCCCceEEc--cccccccccccccccceecCCcccchHHhccC---CCCccce
Confidence            345678899999999999999999999999999988  99998432      234688999999999764   4558999


Q ss_pred             HHHHHHHHHHHHhCC-CCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHhhhh
Q psy12581         77 MWSFAVLLWELATRE-VPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKMK  152 (153)
Q Consensus        77 v~s~g~~~~~~~~g~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~~~~  152 (153)
                      +||||+++||+++|. +||.+....+....+ ..+.+++.|..+++++.+++.+||+.||++|||++++++.|+++.
T Consensus       209 vwSfGvil~ell~~~~~p~~~~~~~~~~~~i-~~~~~~~~~~~~~~~~~~li~~cl~~dP~~RPs~~eil~~L~~i~  284 (309)
T d1fvra_         209 VWSYGVLLWEIVSLGGTPYCGMTCAELYEKL-PQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML  284 (309)
T ss_dssp             HHHHHHHHHHHHTTSCCTTTTCCHHHHHHHG-GGTCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred             eehhHHHHHHHHhcCCCCCCCCCHHHHHHHH-HhcCCCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence            999999999999965 577776666655444 455677778889999999999999999999999999999998874

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=4.5e-33  Score=187.46  Aligned_cols=137  Identities=24%  Similarity=0.251  Sum_probs=106.6

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeec---cccchhhccccccccccc------CCcccCCcccCccccccCCCCCCcchh
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQID---EDLTARINMADAQFSFQQ------RGRCYYPAWMSPEALQKKPGDRNLEAC   75 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~---~~~~~kl~~~d~g~~~~~------~~~~~~~~~~~pe~~~~~~~~~~~~~~   75 (153)
                      ..-++.|||++++.|+||++.||++.   .++.+|+.  |||++...      ...+||+.|+|||.+.+.   .++.++
T Consensus       116 i~~al~ylH~~~iiHrDiKp~Nil~~~~~~~~~vkl~--DFG~a~~~~~~~~~~~~~GT~~y~APE~~~~~---~~~~~~  190 (307)
T d1a06a_         116 VLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMIS--DFGLSKMEDPGSVLSTACGTPGYVAPEVLAQK---PYSKAV  190 (307)
T ss_dssp             HHHHHHHHHHTTCCCSCCCGGGEEESSSSTTCCEEEC--CC------------------CTTSCHHHHTTC---CCCTHH
T ss_pred             HHHHHHhhhhceeeeEEecccceeecccCCCceEEEe--ccceeEEccCCCeeeeeeeCccccCcHHHcCC---CCCcHH
Confidence            45678999999999999999999995   46777777  99998432      345799999999999865   345899


Q ss_pred             hHHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccC--CCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581         76 DMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRIT--IPPGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus        76 dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      |+||+|+++|++++|..||.+.........+.......+  .+...++.+.+++.+||+.||++|||++++++
T Consensus       191 DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~  263 (307)
T d1a06a_         191 DCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQ  263 (307)
T ss_dssp             HHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHTTCCCCCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             HhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHhccCCCCCCccccCCCHHHHHHHHHHccCCHhHCcCHHHHhc
Confidence            999999999999999999998877776666665544333  34568999999999999999999999999987

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.5e-33  Score=188.08  Aligned_cols=135  Identities=21%  Similarity=0.338  Sum_probs=115.5

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc-------CCcccCCcccCccccccCCCCCCcchhhH
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ-------RGRCYYPAWMSPEALQKKPGDRNLEACDM   77 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~-------~~~~~~~~~~~pe~~~~~~~~~~~~~~dv   77 (153)
                      ...++.|||+++|+|+||++.||+++.+|.+||+  |||++...       ...+||+.|+|||++.+..   ++.++|+
T Consensus       114 il~al~ylH~~~iiHRDlKP~NILl~~~g~vkl~--DFG~a~~~~~~~~~~~~~~GT~~Y~aPE~~~~~~---y~~~~Di  188 (337)
T d1o6la_         114 IVSALEYLHSRDVVYRDIKLENLMLDKDGHIKIT--DFGLCKEGISDGATMKTFCGTPEYLAPEVLEDND---YGRAVDW  188 (337)
T ss_dssp             HHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEEC--CCTTCBCSCCTTCCBCCCEECGGGCCGGGGSSSC---BCTTHHH
T ss_pred             HhhhhhhhhhcCccccccCHHHeEecCCCCEEEe--ecccccccccCCcccccceeCHHHhhhhhccCCC---CChhhcc
Confidence            4568899999999999999999999999999988  99998432       2357999999999998754   4589999


Q ss_pred             HHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCC-----HHHHHH
Q psy12581         78 WSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPT-----FDMVLP  146 (153)
Q Consensus        78 ~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps-----~~~~l~  146 (153)
                      ||+|+++|++++|+.||.+.+.......+...  ....|..+++++.+++.+||+.||++|++     ++++++
T Consensus       189 wSlGvilyeml~G~~pf~~~~~~~~~~~i~~~--~~~~p~~~s~~~~dli~~~L~~dP~~R~~~~~~~~~eil~  260 (337)
T d1o6la_         189 WGLGVVMYEMMCGRLPFYNQDHERLFELILME--EIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME  260 (337)
T ss_dssp             HHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC--CCCCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred             cchhhHHHHHHHCCCCCCCcCHHHHHHHHhcC--CCCCCccCCHHHHHHHHhhccCCchhhcccccccHHHHHc
Confidence            99999999999999999988877766655544  35568889999999999999999999995     777764

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.98  E-value=6.3e-33  Score=187.24  Aligned_cols=143  Identities=22%  Similarity=0.388  Sum_probs=123.4

Q ss_pred             chhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc---------CCcccCCcccCccccccCCCCCCcch
Q psy12581          4 KKIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ---------RGRCYYPAWMSPEALQKKPGDRNLEA   74 (153)
Q Consensus         4 ~~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~---------~~~~~~~~~~~pe~~~~~~~~~~~~~   74 (153)
                      ..+-++.|||+++++|+||++.||+++.++.+++.  |||.+...         ...++|+.|+|||.+.+.   .++.+
T Consensus       153 qi~~gl~~LH~~~ivHrDLKp~NIl~~~~~~~ki~--DfG~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~  227 (311)
T d1t46a_         153 QVAKGMAFLASKNCIHRDLAARNILLTHGRITKIC--DFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNC---VYTFE  227 (311)
T ss_dssp             HHHHHHHHHHHTTCCCSCCSGGGEEEETTTEEEEC--CCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHC---CCCHH
T ss_pred             HHHHHHHHHHhCCeeecccccccccccccCccccc--ccchheeccCCCcceEeeecccChHHcCHHHhcCC---CCCCc
Confidence            44567899999999999999999999999999998  99998432         234678999999998764   45689


Q ss_pred             hhHHHHHHHHHHHHh-CCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHhhh
Q psy12581         75 CDMWSFAVLLWELAT-REVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKM  151 (153)
Q Consensus        75 ~dv~s~g~~~~~~~~-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~~~  151 (153)
                      +|+||||+++|||++ |.+|+.+........+++..+.++..|...+..+.+++.+||+.||++|||++++++.|+++
T Consensus       228 ~DIwS~G~~l~ellt~g~p~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~Li~~cl~~dP~~RPs~~~il~~L~~~  305 (311)
T d1t46a_         228 SDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQ  305 (311)
T ss_dssp             HHHHHHHHHHHHHHTTTCCSSTTCCSSHHHHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             ccccchHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCCCCCcccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHh
Confidence            999999999999998 67777777776766777777778888888999999999999999999999999999999865

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.98  E-value=9.2e-33  Score=186.62  Aligned_cols=135  Identities=23%  Similarity=0.328  Sum_probs=115.9

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc----CCcccCCcccCccccccCCCCCCcchhhHHHH
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ----RGRCYYPAWMSPEALQKKPGDRNLEACDMWSF   80 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~----~~~~~~~~~~~pe~~~~~~~~~~~~~~dv~s~   80 (153)
                      ...++.|||+++|+|+||++.||+++.+|.+||+  |||++...    ...+||+.|+|||.+.+.+   ++.++|+||+
T Consensus       113 i~~al~~lH~~~iiHrDiKp~NILl~~~g~vkL~--DFG~a~~~~~~~~~~~Gt~~Y~APE~l~~~~---y~~~~DiwSl  187 (316)
T d1fota_         113 VCLALEYLHSKDIIYRDLKPENILLDKNGHIKIT--DFGFAKYVPDVTYTLCGTPDYIAPEVVSTKP---YNKSIDWWSF  187 (316)
T ss_dssp             HHHHHHHHHTTTEECCCCCGGGEEECTTSCEEEC--CCSSCEECSSCBCCCCSCTTTCCHHHHTTCC---BCTTHHHHHH
T ss_pred             HHHhhhhhccCcEEccccCchheeEcCCCCEEEe--cCccceEeccccccccCcccccCHHHHcCCC---CCchhhcccc
Confidence            4567899999999999999999999999999988  99998433    3468999999999998653   4589999999


Q ss_pred             HHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCC-----CHHHHHH
Q psy12581         81 AVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRP-----TFDMVLP  146 (153)
Q Consensus        81 g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----s~~~~l~  146 (153)
                      |+++|++++|+.||.+.+.......+...  ....|...++++.+++.+||+.||.+|+     |++++++
T Consensus       188 GvilyemltG~~Pf~~~~~~~~~~~i~~~--~~~~p~~~s~~~~~li~~~L~~dp~~R~~~~r~t~~~il~  256 (316)
T d1fota_         188 GILIYEMLAGYTPFYDSNTMKTYEKILNA--ELRFPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKN  256 (316)
T ss_dssp             HHHHHHHHHSSCTTCCSSHHHHHHHHHHC--CCCCCTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHT
T ss_pred             chhHHHHHhCCCCCCCcCHHHHHHHHHcC--CCCCCCCCCHHHHHHHHHHhhhCHHhccccchhhHHHHHc
Confidence            99999999999999988877776666554  3455778999999999999999999996     8888875

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.98  E-value=9.5e-33  Score=183.71  Aligned_cols=143  Identities=16%  Similarity=0.169  Sum_probs=115.1

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccc----------cCCcccCCcccCccccccCCCCCCcch
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQ----------QRGRCYYPAWMSPEALQKKPGDRNLEA   74 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~----------~~~~~~~~~~~~pe~~~~~~~~~~~~~   74 (153)
                      ..-++.|||++++.|+||++.||+++.++..++.  |||.+..          ....+||+.|+|||.+.+.   .++.+
T Consensus       120 i~~al~~lH~~~iiHrDiKP~NIll~~~~~~~l~--d~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~---~~~~~  194 (277)
T d1o6ya_         120 ACQALNFSHQNGIIHRDVKPANIMISATNAVKVM--DFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGD---SVDAR  194 (277)
T ss_dssp             HHHHHHHHHHTTEECCCCSGGGEEEETTSCEEEC--CCTTCEECC----------------TTCCHHHHTTC---CCCHH
T ss_pred             HHHHHHHHHhCCccCccccCcccccCccccceee--hhhhhhhhccccccccccccccCcccccCHHHHcCC---CCCcc
Confidence            3457899999999999999999999999999988  9987632          1234789999999999764   45589


Q ss_pred             hhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhcccc--CCCCCCCHHHHHHHHHHhcCCCCCCC-CHHHHHHHHhhh
Q psy12581         75 CDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRI--TIPPGISSHLSKLIRICMNEDPGKRP-TFDMVLPILDKM  151 (153)
Q Consensus        75 ~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~cl~~~p~~Rp-s~~~~l~~L~~~  151 (153)
                      +|+||+|+++|++++|+.||.+................+  .....+++.+.+++.+||+.||++|| |+++++..|.++
T Consensus       195 ~DiwSlGvilyelltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~~li~~~L~~dp~~R~~sa~~l~~~l~r~  274 (277)
T d1o6ya_         195 SDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRV  274 (277)
T ss_dssp             HHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCCCGGGTSSSCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred             eecccchHHHHHHHhCCCCCCCcCHHHHHHHHHhcCCCCCchhccCCCHHHHHHHHHHccCCHhHCHhHHHHHHHHHHHH
Confidence            999999999999999999999887777666666554332  23456899999999999999999999 899999999887


Q ss_pred             h
Q psy12581        152 K  152 (153)
Q Consensus       152 ~  152 (153)
                      .
T Consensus       275 ~  275 (277)
T d1o6ya_         275 H  275 (277)
T ss_dssp             H
T ss_pred             h
Confidence            5

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.98  E-value=1e-32  Score=188.63  Aligned_cols=135  Identities=24%  Similarity=0.300  Sum_probs=115.1

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc----CCcccCCcccCccccccCCCCCCcchhhHHHH
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ----RGRCYYPAWMSPEALQKKPGDRNLEACDMWSF   80 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~----~~~~~~~~~~~pe~~~~~~~~~~~~~~dv~s~   80 (153)
                      ..-++.|||+++|+|+||++.||+++.+|.+||+  |||++...    ....||+.|+|||++.+..   ++.++|+||+
T Consensus       150 i~~aL~yLH~~~iiHRDIKP~NILl~~~g~ikL~--DFG~a~~~~~~~~~~~Gt~~Y~APE~~~~~~---~~~~~DiwSl  224 (350)
T d1rdqe_         150 IVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVT--DFGFAKRVKGRTWTLCGTPEALAPEIILSKG---YNKAVDWWAL  224 (350)
T ss_dssp             HHHHHHHHHHTTEECCCCSGGGEEECTTSCEEEC--CCTTCEECSSCBCCCEECGGGCCHHHHTTCC---BCTHHHHHHH
T ss_pred             HHHHHHHHHhCCEecCcCCHHHcccCCCCCEEee--eceeeeecccccccccCccccCCHHHHcCCC---CCccccccch
Confidence            4567899999999999999999999999999888  99998543    3457999999999998753   4589999999


Q ss_pred             HHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCC-----CHHHHHH
Q psy12581         81 AVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRP-----TFDMVLP  146 (153)
Q Consensus        81 g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rp-----s~~~~l~  146 (153)
                      |+++|++++|..||.+.........+...  ....|..+++++.+++.+||+.||++|+     |++++++
T Consensus       225 GvilyemltG~~Pf~~~~~~~~~~~i~~~--~~~~p~~~s~~~~~li~~~L~~dP~kR~~~~r~t~~ell~  293 (350)
T d1rdqe_         225 GVLIYEMAAGYPPFFADQPIQIYEKIVSG--KVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN  293 (350)
T ss_dssp             HHHHHHHHHSSCSSCCSSHHHHHHHHHHC--CCCCCTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred             hHHHHHHHhCCCCCCCcCHHHHHHHHhcC--CCCCCccCCHHHHHHHHHHhhhCHHhccccccccHHHHHc
Confidence            99999999999999888776666666544  3455778999999999999999999994     8888875

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.98  E-value=1.7e-32  Score=184.93  Aligned_cols=143  Identities=29%  Similarity=0.443  Sum_probs=120.8

Q ss_pred             chhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc---------CCcccCCcccCccccccCCCCCCcch
Q psy12581          4 KKIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ---------RGRCYYPAWMSPEALQKKPGDRNLEA   74 (153)
Q Consensus         4 ~~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~---------~~~~~~~~~~~pe~~~~~~~~~~~~~   74 (153)
                      ..+-++.|||+++|.|+||++.||+++.++.+||+  |||++...         ....+++.|++||.+.+.   .++.+
T Consensus       141 ~ia~gl~~LH~~~ivHrDlk~~NiLld~~~~~Kl~--DFGla~~~~~~~~~~~~~~~~~t~~y~aPe~l~~~---~~~~~  215 (308)
T d1p4oa_         141 EIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIG--DFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDG---VFTTY  215 (308)
T ss_dssp             HHHHHHHHHHHTTCBCSCCSGGGEEECTTCCEEEC--CTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHC---CCCHH
T ss_pred             HHHHHHHHHhhCCeeeceEcCCceeecCCceEEEe--ecccceeccCCcceeeccceecccccCCHHHHccC---CCCcc
Confidence            34567899999999999999999999999999999  99998422         233678999999998864   44589


Q ss_pred             hhHHHHHHHHHHHHhC-CCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHHHHhhhh
Q psy12581         75 CDMWSFAVLLWELATR-EVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLPILDKMK  152 (153)
Q Consensus        75 ~dv~s~g~~~~~~~~g-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~~L~~~~  152 (153)
                      +|+||||+++||+++| ..||.+....+....+. .+..++.|..+++.+.+++.+||+.+|++|||++++++.|++..
T Consensus       216 ~Dv~S~G~il~El~t~~~~p~~~~~~~~~~~~i~-~~~~~~~p~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~~~  293 (308)
T d1p4oa_         216 SDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVM-EGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEM  293 (308)
T ss_dssp             HHHHHHHHHHHHHHHTSCCTTTTSCHHHHHHHHH-TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGS
T ss_pred             cccccHHHHHHHHHhCCCCCCCCCCHHHHHHHHH-hCCCCCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhc
Confidence            9999999999999997 57887777766665544 45567778889999999999999999999999999999998753

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=2.4e-32  Score=185.16  Aligned_cols=137  Identities=20%  Similarity=0.242  Sum_probs=104.6

Q ss_pred             hhhHHhhhhcC-CCCCCCeeeeeeeeccccchhhcccccccccc-----cCCcccCCcccCccccccCCCCCCcchhhHH
Q psy12581          5 KIVYSFYLNSK-KSKTSNAFLFCCQIDEDLTARINMADAQFSFQ-----QRGRCYYPAWMSPEALQKKPGDRNLEACDMW   78 (153)
Q Consensus         5 ~~~~~~~lh~~-~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~-----~~~~~~~~~~~~pe~~~~~~~~~~~~~~dv~   78 (153)
                      ..-++.|||++ +|.|+||++.||+++.+|.+||+  |||++..     ..+.+||+.|+|||++.+.+   ++.++|+|
T Consensus       113 il~aL~yLH~~~~IiHRDiKP~NILl~~~~~vkl~--DFGla~~~~~~~~~~~~GT~~Y~APEvl~~~~---y~~~~DiW  187 (322)
T d1s9ja_         113 VIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLC--DFGVSGQLIDSMANSFVGTRSYMSPERLQGTH---YSVQSDIW  187 (322)
T ss_dssp             HHHHHHHHHHHHCCCCSCCSGGGEEECTTCCEEEC--CCCCCHHHHHHTC---CCSSCCCCHHHHHCSC---CCTTHHHH
T ss_pred             HHHHHHHHHHhCCEEccccCHHHeeECCCCCEEEe--eCCCccccCCCccccccCCccccCchHHcCCC---CCcHHHHH
Confidence            34578899985 89999999999999999999988  9999842     24568999999999998753   55899999


Q ss_pred             HHHHHHHHHHhCCCCCCCCCchhhhHH-----------------------------------------HHhhccccCCC-
Q psy12581         79 SFAVLLWELATREVPFADLTPMEVGMK-----------------------------------------VALEGLRITIP-  116 (153)
Q Consensus        79 s~g~~~~~~~~g~~p~~~~~~~~~~~~-----------------------------------------~~~~~~~~~~~-  116 (153)
                      |+|+++||+++|+.||.+.+.......                                         .......+..+ 
T Consensus       188 SlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  267 (322)
T d1s9ja_         188 SMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPPPKLPS  267 (322)
T ss_dssp             HHHHHHHHHHHSSCCSSCCCTTHHHHHC------------------------------CCCCHHHHHHHHHTSCCCCCCB
T ss_pred             HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhcCCcccCCcccccccccccccccccccchhHHHHHhhhhccCCccCcc
Confidence            999999999999999976443221100                                         00000111111 


Q ss_pred             CCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581        117 PGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus       117 ~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      ...+.++.+++.+||+.||++|||++++++
T Consensus       268 ~~~s~~~~dli~~~L~~dP~~R~ta~e~L~  297 (322)
T d1s9ja_         268 GVFSLEFQDFVNKCLIKNPAERADLKQLMV  297 (322)
T ss_dssp             TTBCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred             ccCCHHHHHHHHHHcCCChhHCcCHHHHhh
Confidence            236789999999999999999999999986

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.97  E-value=4.3e-32  Score=186.42  Aligned_cols=138  Identities=18%  Similarity=0.176  Sum_probs=110.8

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc-----CCcccCCcccCccccccCCCCCCcchhhHHH
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ-----RGRCYYPAWMSPEALQKKPGDRNLEACDMWS   79 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~-----~~~~~~~~~~~pe~~~~~~~~~~~~~~dv~s   79 (153)
                      ..-++.|||+++++|+||++.||+++.+|.+||+  |||++...     ...+||+.|+|||.+...  ..++.++|+||
T Consensus       116 i~~aL~ylH~~~iiHrDlKP~NILl~~~g~iKl~--DFGla~~~~~~~~~~~~GT~~y~APE~~~~~--~~~~~~~DiwS  191 (364)
T d1omwa3         116 IILGLEHMHNRFVVYRDLKPANILLDEHGHVRIS--DLGLACDFSKKKPHASVGTHGYMAPEVLQKG--VAYDSSADWFS  191 (364)
T ss_dssp             HHHHHHHHHHTTEECCCCSGGGEEECSSSCEEEC--CCTTCEECSSSCCCSCCSCGGGCCHHHHSTT--CCCCTHHHHHH
T ss_pred             HHHHHHHHHHCCccceeeccceeEEcCCCcEEEe--eeceeeecCCCcccccccccccchhHHhhcC--CCCCcccchhH
Confidence            4567899999999999999999999999999988  99998432     345799999999998642  23558999999


Q ss_pred             HHHHHHHHHhCCCCCCCCCchhhhHHH-HhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCC-----HHHHHH
Q psy12581         80 FAVLLWELATREVPFADLTPMEVGMKV-ALEGLRITIPPGISSHLSKLIRICMNEDPGKRPT-----FDMVLP  146 (153)
Q Consensus        80 ~g~~~~~~~~g~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps-----~~~~l~  146 (153)
                      +|+++|+|++|+.||.+.......... .........|..+++++.+++.+||+.||++|||     ++++++
T Consensus       192 lGvilyemltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~a~eil~  264 (364)
T d1omwa3         192 LGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE  264 (364)
T ss_dssp             HHHHHHHHHHSSCSSCSSCSSCHHHHHHHSSSCCCCCCSSSCHHHHHHHHHHTCSSTTTSTTTSSSTHHHHHT
T ss_pred             HHHHHHHHHhCCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHHcccCHHHhCCCcccCHHHHHc
Confidence            999999999999999875543332111 1122244556789999999999999999999999     677764

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=7.2e-32  Score=181.60  Aligned_cols=136  Identities=15%  Similarity=0.105  Sum_probs=111.2

Q ss_pred             hhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc------CCcccCCcccCccccccCCCCCCcchhhHHH
Q psy12581          6 IVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ------RGRCYYPAWMSPEALQKKPGDRNLEACDMWS   79 (153)
Q Consensus         6 ~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~------~~~~~~~~~~~pe~~~~~~~~~~~~~~dv~s   79 (153)
                      .-++.|||+++|+|+||++.||+++.++.+|+.  |||.+...      ....||+.|+|||.+.+.   .++.++|+||
T Consensus       126 ~~aL~yLH~~~ivHrDiKp~NILi~~~~~~kl~--dfg~~~~~~~~~~~~~~~gT~~Y~APE~~~~~---~y~~~~DiwS  200 (305)
T d1blxa_         126 LRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLA--DFGLARIYSFQMALTSVVVTLWYRAPEVLLQS---SYATPVDLWS  200 (305)
T ss_dssp             HHHHHHHHHTTCCCCCCCGGGEEECTTCCEEEC--SCCSCCCCCGGGGGCCCCCCCTTCCHHHHTTC---CCCTHHHHHH
T ss_pred             HHHHHHHHhCCEEecCCCccEEEEcCCCCeeec--chhhhhhhcccccCCCcccChhhcCcchhcCC---CCChhehhhc
Confidence            457899999999999999999999999999998  99987322      456899999999999865   4558999999


Q ss_pred             HHHHHHHHHhCCCCCCCCCchhhhHHHHhhcc-------------------------ccCCCCCCCHHHHHHHHHHhcCC
Q psy12581         80 FAVLLWELATREVPFADLTPMEVGMKVALEGL-------------------------RITIPPGISSHLSKLIRICMNED  134 (153)
Q Consensus        80 ~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~~~~~l~~~cl~~~  134 (153)
                      +|+++|++++|+.||.+.+.......+.....                         ....+...++.+.+|+.+||+.|
T Consensus       201 lG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~d  280 (305)
T d1blxa_         201 VGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFN  280 (305)
T ss_dssp             HHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSS
T ss_pred             hHHHHHHHHHCCCCCCCCCHHHHHHHHHHhhCCCchhcccccccchhhhhccccccchhhccccCCHHHHHHHHHHCcCC
Confidence            99999999999999988776665544432100                         00123456889999999999999


Q ss_pred             CCCCCCHHHHHH
Q psy12581        135 PGKRPTFDMVLP  146 (153)
Q Consensus       135 p~~Rps~~~~l~  146 (153)
                      |++|||++++++
T Consensus       281 P~~R~sa~e~L~  292 (305)
T d1blxa_         281 PAKRISAYSALS  292 (305)
T ss_dssp             TTTSCCHHHHHT
T ss_pred             hhHCcCHHHHhc
Confidence            999999999986

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=99.97  E-value=2.9e-32  Score=186.37  Aligned_cols=138  Identities=19%  Similarity=0.134  Sum_probs=112.7

Q ss_pred             chhhHHhhhhcCCCCCCCeeeeeeeecc--ccchhhcccccccccccC------CcccCCcccCccccccCCCCCCcchh
Q psy12581          4 KKIVYSFYLNSKKSKTSNAFLFCCQIDE--DLTARINMADAQFSFQQR------GRCYYPAWMSPEALQKKPGDRNLEAC   75 (153)
Q Consensus         4 ~~~~~~~~lh~~~i~~~ni~~~~~~~~~--~~~~kl~~~d~g~~~~~~------~~~~~~~~~~pe~~~~~~~~~~~~~~   75 (153)
                      ...-++.|||+++++|+||++.||+++.  ++.+||.  |||++....      ...||+.|+|||++.+.+   ++.++
T Consensus       132 qi~~aL~ylH~~~iiHrDiKp~NIll~~~~~~~vkL~--DFG~a~~~~~~~~~~~~~gT~~Y~aPEv~~~~~---~~~~~  206 (350)
T d1koaa2         132 QVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLI--DFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKP---VGYYT  206 (350)
T ss_dssp             HHHHHHHHHHHTTEECCCCCGGGEEESSTTSCCEEEC--CCTTCEECCTTSCEEEECSCTTTCCHHHHHTCC---BCHHH
T ss_pred             HHHHHHHHHHhcCCeeeeechhHeeeccCCCCeEEEe--ecchheecccccccceecCcccccCHHHHcCCC---CChhH
Confidence            3456789999999999999999999964  4666766  999985432      247899999999998753   45899


Q ss_pred             hHHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccC--CCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581         76 DMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRIT--IPPGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus        76 dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      |+||+|+++|+|++|+.||.+....+....+.......+  .....++.+.+++.+||+.||++|||++++++
T Consensus       207 DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~eil~  279 (350)
T d1koaa2         207 DMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALE  279 (350)
T ss_dssp             HHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCSCCGGGGGCCHHHHHHHHHHCCSSGGGSCCHHHHHH
T ss_pred             hhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCcccccCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            999999999999999999988877776666655443332  22457899999999999999999999999986

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=1.3e-31  Score=179.99  Aligned_cols=138  Identities=17%  Similarity=0.065  Sum_probs=110.4

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc-------CCcccCCcccCccccccCCCCCCcchhhH
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ-------RGRCYYPAWMSPEALQKKPGDRNLEACDM   77 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~-------~~~~~~~~~~~pe~~~~~~~~~~~~~~dv   77 (153)
                      ..-+++|||++++.|+||++.||+++.++.+||.  |||.+...       ...++|+.|+|||.+....  .++.++|+
T Consensus       109 il~aL~~lH~~~iiHrDiKp~NIli~~~~~~KL~--DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~~Di  184 (299)
T d1ua2a_         109 TLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLA--DFGLAKSFGSPNRAYTHQVVTRWYRAPELLFGAR--MYGVGVDM  184 (299)
T ss_dssp             HHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEEC--CCGGGSTTTSCCCCCCCSCCCCTTCCHHHHTTCS--CCCHHHHH
T ss_pred             HHHHHHHhhccceecccCCcceEEecCCCccccc--cCccccccCCCcccccceecChhhccHHHHccCC--CCChhhhh
Confidence            3457899999999999999999999999999988  99998432       2346899999999986532  34689999


Q ss_pred             HHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhcccc------------------C--------CCCCCCHHHHHHHHHHh
Q psy12581         78 WSFAVLLWELATREVPFADLTPMEVGMKVALEGLRI------------------T--------IPPGISSHLSKLIRICM  131 (153)
Q Consensus        78 ~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~------------------~--------~~~~~~~~~~~l~~~cl  131 (153)
                      ||+|+++|++++|..||.+....+....+......+                  .        .....++.+.+++.+||
T Consensus       185 wSlGvil~el~~g~~pf~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L  264 (299)
T d1ua2a_         185 WAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLF  264 (299)
T ss_dssp             HHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHH
T ss_pred             hhcchHHHHHHhCcCCCCCCCHHHHHHHHHHhcCCCChhhccchhccchhhhhccCCCCChHHhcccCCHHHHHHHHHHc
Confidence            999999999999999998877766655443211000                  0        01245789999999999


Q ss_pred             cCCCCCCCCHHHHHH
Q psy12581        132 NEDPGKRPTFDMVLP  146 (153)
Q Consensus       132 ~~~p~~Rps~~~~l~  146 (153)
                      +.||++|||++|+++
T Consensus       265 ~~dP~~R~sa~e~L~  279 (299)
T d1ua2a_         265 LFNPCARITATQALK  279 (299)
T ss_dssp             CSSTTTSCCHHHHHT
T ss_pred             cCChhhCcCHHHHhC
Confidence            999999999999986

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=1.3e-32  Score=186.10  Aligned_cols=135  Identities=22%  Similarity=0.301  Sum_probs=115.1

Q ss_pred             chhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc-------CCcccCCcccCccccccCCCCCCcchhh
Q psy12581          4 KKIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ-------RGRCYYPAWMSPEALQKKPGDRNLEACD   76 (153)
Q Consensus         4 ~~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~-------~~~~~~~~~~~pe~~~~~~~~~~~~~~d   76 (153)
                      ....++.|||++++.|+||++.||+++.++.+|+.  |||++...       ...+||+.|+|||.+.+.   .++.++|
T Consensus       111 qi~~al~ylH~~~iiHrDikp~NiL~~~~~~~kl~--DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~D  185 (320)
T d1xjda_         111 EIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIA--DFGMCKENMLGDAKTNTFCGTPDYIAPEILLGQ---KYNHSVD  185 (320)
T ss_dssp             HHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEEC--CCTTCBCCCCTTCCBCCCCSCGGGCCHHHHTTC---CBCTHHH
T ss_pred             HHHHHHHHHHhCCeeeccCcccceeecCCCceecc--ccchhhhcccccccccccCCCCCcCCHHHHcCC---CCCchhh
Confidence            35678999999999999999999999999999988  99998432       335789999999999875   3458999


Q ss_pred             HHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHH-HHH
Q psy12581         77 MWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFD-MVL  145 (153)
Q Consensus        77 v~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~-~~l  145 (153)
                      +||+|+++|++++|+.||.+.+.......+...  .+..|...++.+.+++.+||+.||++||+++ +++
T Consensus       186 iwSlGvilyemltG~~PF~~~~~~~~~~~i~~~--~~~~p~~~s~~~~dli~~~L~~dP~~R~s~~~~l~  253 (320)
T d1xjda_         186 WWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMD--NPFYPRWLEKEAKDLLVKLFVREPEKRLGVRGDIR  253 (320)
T ss_dssp             HHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC--CCCCCTTSCHHHHHHHHHHSCSSGGGSBTTBSCGG
T ss_pred             hhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHcC--CCCCCccCCHHHHHHHHHhcccCCCCCcCHHHHHH
Confidence            999999999999999999988777766665544  4456778899999999999999999999985 664

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=99.97  E-value=8.1e-32  Score=184.25  Aligned_cols=137  Identities=16%  Similarity=0.132  Sum_probs=113.2

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeec--cccchhhcccccccccccC------CcccCCcccCccccccCCCCCCcchhh
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQID--EDLTARINMADAQFSFQQR------GRCYYPAWMSPEALQKKPGDRNLEACD   76 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~--~~~~~kl~~~d~g~~~~~~------~~~~~~~~~~pe~~~~~~~~~~~~~~d   76 (153)
                      ..-++.|||+++|.|+||++.||+++  .++.+||.  |||++....      ...+|+.|+|||.+.+.   .++.++|
T Consensus       136 i~~aL~ylH~~~iiHRDiKp~NILl~~~~~~~vkL~--DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~D  210 (352)
T d1koba_         136 ACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKII--DFGLATKLNPDEIVKVTTATAEFAAPEIVDRE---PVGFYTD  210 (352)
T ss_dssp             HHHHHHHHHHTTEECCCCCGGGEEESSTTCCCEEEC--CCTTCEECCTTSCEEEECSSGGGCCHHHHTTC---CBCHHHH
T ss_pred             HHHHHHHHHHCCeeecccccccccccccCCCeEEEe--ecccceecCCCCceeeccCcccccCHHHHcCC---CCCCccc
Confidence            45678999999999999999999998  45666666  999985432      24789999999999864   3558999


Q ss_pred             HHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhcccc--CCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581         77 MWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRI--TIPPGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus        77 v~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      +||+|+++|+|++|..||.+.........+.......  ..+..+++++.+++.+||+.||++|||++++++
T Consensus       211 iwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~  282 (352)
T d1koba_         211 MWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALE  282 (352)
T ss_dssp             HHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHCCCCCCSSTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred             hHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCcccccCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            9999999999999999999888777766665544332  234568999999999999999999999999976

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.97  E-value=1.2e-31  Score=178.22  Aligned_cols=140  Identities=20%  Similarity=0.241  Sum_probs=115.6

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc------CCcccCCcccCccccccCC---CCCCcchh
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ------RGRCYYPAWMSPEALQKKP---GDRNLEAC   75 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~------~~~~~~~~~~~pe~~~~~~---~~~~~~~~   75 (153)
                      ..-++.|||++++.|+||+++||+++.++.+||.  |||++...      ....||+.|++||.+.+..   ...++.++
T Consensus       119 i~~al~~lH~~~ivHrDlkp~Nill~~~~~~kl~--DFG~a~~~~~~~~~~~~~gt~~y~~PE~~~~~~~~~~~~~~~~~  196 (277)
T d1phka_         119 LLEVICALHKLNIVHRDLKPENILLDDDMNIKLT--DFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEV  196 (277)
T ss_dssp             HHHHHHHHHHTTEECSCCSGGGEEECTTCCEEEC--CCTTCEECCTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHH
T ss_pred             HHHHHHHHHHcCCcccccccceEEEcCCCCeEEc--cchheeEccCCCceeeeeccCCCCCHHHhhccccccCCCCCchh
Confidence            3457899999999999999999999999999998  99998432      3357899999999986421   22356889


Q ss_pred             hHHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCC--CCCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581         76 DMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRITI--PPGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus        76 dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      |+||+|+++|++++|+.||.+.........+.......+.  ....++++.+++.+||+.||++|||++++++
T Consensus       197 DiwslGvilyeml~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~~p~~R~s~~eil~  269 (277)
T d1phka_         197 DMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA  269 (277)
T ss_dssp             HHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred             eEcccchhhhhhccCCCCCCCCCHHHHHHHHHhCCCCCCCcccccCCHHHHHHHHHHccCChhHCcCHHHHHc
Confidence            9999999999999999999988877766666655443332  2368999999999999999999999999875

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=1.2e-31  Score=179.63  Aligned_cols=139  Identities=21%  Similarity=0.224  Sum_probs=111.9

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccch--hhccccccccccc------CCcccCCcccCccccccCCCCCCcchhh
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTA--RINMADAQFSFQQ------RGRCYYPAWMSPEALQKKPGDRNLEACD   76 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~--kl~~~d~g~~~~~------~~~~~~~~~~~pe~~~~~~~~~~~~~~d   76 (153)
                      ..-++.|||++++.|+||++.||+++.++..  .+++.|||++...      ....+++.|+|||.+.+.   .++.++|
T Consensus       122 i~~al~yLH~~~ivHrDiKp~Nill~~~~~~~~~vkl~DfG~a~~~~~~~~~~~~~~t~~y~APE~~~~~---~~~~~~D  198 (293)
T d1jksa_         122 ILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYE---PLGLEAD  198 (293)
T ss_dssp             HHHHHHHHHHTTEECCCCSGGGEEESCSSSSSCCEEECCCTTCEECTTSCBCSCCCCCGGGCCHHHHTTC---CBCTHHH
T ss_pred             HHHHHHhhhhcceeecccccceEEEecCCCcccceEecchhhhhhcCCCccccccCCCCcccCHHHHcCC---CCCCccc
Confidence            3457899999999999999999999988752  2334499998432      335788999999999864   3458999


Q ss_pred             HHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccC--CCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581         77 MWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRIT--IPPGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus        77 v~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      +||+|+++|++++|+.||.+....+....+.......+  .+...+..+.+++++||+.||++|||++++++
T Consensus       199 iwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~  270 (293)
T d1jksa_         199 MWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ  270 (293)
T ss_dssp             HHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHTTCCCCCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             chhhhHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCCCCchhcCCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            99999999999999999998777766665554433222  23568899999999999999999999999985

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=3.4e-31  Score=175.79  Aligned_cols=130  Identities=17%  Similarity=0.209  Sum_probs=105.9

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccc-cchhhccccccccccc-----CCcccCCcccCccccccCCCCCCcchhhHH
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDED-LTARINMADAQFSFQQ-----RGRCYYPAWMSPEALQKKPGDRNLEACDMW   78 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~-~~~kl~~~d~g~~~~~-----~~~~~~~~~~~pe~~~~~~~~~~~~~~dv~   78 (153)
                      ..-++.|||++++.|+||++.||+++.+ +.+|+.  |||++...     ....||+.|+|||.+.+..+  .+.++|+|
T Consensus       119 i~~al~~lH~~~iiHrDiKp~NIll~~~~~~vkl~--DFG~a~~~~~~~~~~~~GT~~y~aPE~~~~~~~--~~~~~Diw  194 (273)
T d1xwsa_         119 VLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLI--DFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRY--HGRSAAVW  194 (273)
T ss_dssp             HHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEEC--CCTTCEECCSSCBCCCCSCGGGSCHHHHHHSCB--CHHHHHHH
T ss_pred             HHHHHHHHHHCCCccccCcccceEEecCCCeEEEC--ccccceecccccccccccCCCcCCHHHHcCCCC--CCcccccc
Confidence            3457899999999999999999999855 677888  99998432     34578999999999876432  34678999


Q ss_pred             HHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581         79 SFAVLLWELATREVPFADLTPMEVGMKVALEGLRITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus        79 s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      |+|+++|++++|+.||.+..      .+...  ....+...++++.+++.+||+.||++|||++++++
T Consensus       195 SlGvilyell~g~~Pf~~~~------~i~~~--~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~  254 (273)
T d1xwsa_         195 SLGILLYDMVCGDIPFEHDE------EIIRG--QVFFRQRVSSECQHLIRWCLALRPSDRPTFEEIQN  254 (273)
T ss_dssp             HHHHHHHHHHHSSCSCCSHH------HHHHC--CCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred             cceeeehhHhhCCCCCCCch------HHhhc--ccCCCCCCCHHHHHHHHHHccCCHhHCcCHHHHhc
Confidence            99999999999999996531      22222  33456778999999999999999999999999986

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=7e-31  Score=178.63  Aligned_cols=137  Identities=20%  Similarity=0.313  Sum_probs=104.2

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccc---cchhhccccccccccc------CCcccCCcccCccccccCCCCCCcchh
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDED---LTARINMADAQFSFQQ------RGRCYYPAWMSPEALQKKPGDRNLEAC   75 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~---~~~kl~~~d~g~~~~~------~~~~~~~~~~~pe~~~~~~~~~~~~~~   75 (153)
                      ..-++.|||+++|.|+||++.||+++.+   +.+|+.  |||++...      ...+||+.|+|||.+.+..   ++.++
T Consensus       120 i~~al~ylH~~~iiHRDiKp~NIll~~~~~~~~~Kl~--DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~---y~~~~  194 (335)
T d2ozaa1         120 IGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLT--DFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEK---YDKSC  194 (335)
T ss_dssp             HHHHHHHHHHTTEECCCCSGGGEEESCSSTTCCEEEC--CCTTCEECCCCCCCCCCSCCCSSCCCCCCCGGG---GSHHH
T ss_pred             HHHHHHHHHHcCCcccccccccccccccccccccccc--ccceeeeccCCCccccccCCcccCCcHHHcCCC---CCHHH
Confidence            3457899999999999999999999863   456666  99998432      3457999999999988653   45899


Q ss_pred             hHHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhcc--ccCCC----CCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581         76 DMWSFAVLLWELATREVPFADLTPMEVGMKVALEGL--RITIP----PGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus        76 dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~----~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      |+||+|+++|++++|+.||.+.........+.....  ....|    ..+++++.+++.+||+.||++|||+.++++
T Consensus       195 DiwSlGvily~lltg~~Pf~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~  271 (335)
T d2ozaa1         195 DMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMN  271 (335)
T ss_dssp             HHHHHHHHHHHHTTSSCSCEETTCC--------CCCSCSSSCCTTHHHHSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             HHHhhchhHHHHhhCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCcccccCCHHHHHHHHHHccCChhHCcCHHHHHc
Confidence            999999999999999999977654443322221111  11222    247889999999999999999999999986

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=3.2e-31  Score=178.23  Aligned_cols=148  Identities=18%  Similarity=0.188  Sum_probs=108.0

Q ss_pred             cchhhHHhhhhc--------CCCCCCCeeeeeeeeccccchhhccccccccccc-----------CCcccCCcccCcccc
Q psy12581          3 KKKIVYSFYLNS--------KKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ-----------RGRCYYPAWMSPEAL   63 (153)
Q Consensus         3 ~~~~~~~~~lh~--------~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~-----------~~~~~~~~~~~pe~~   63 (153)
                      ++.+.++.|+|+        ++|.|+||++.||+++.++.+||+  |||++...           ....||+.|+|||.+
T Consensus       107 ~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp~NILl~~~~~~Kl~--DFGl~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~  184 (303)
T d1vjya_         107 LSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIA--DLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVL  184 (303)
T ss_dssp             HHHHHHHHHHHCCBCSTTCBCEEECSCCCGGGEEECTTSCEEEC--CCTTCEEEETTTTEECC----CCSCGGGCCHHHH
T ss_pred             HHHHHHHHHHHHhhhhhccCCCeeccccCccceEEcCCCCeEEE--ecCccccccCCCcceeccccceecccCcCChhhc
Confidence            345667788885        689999999999999999999998  99987321           234789999999998


Q ss_pred             ccCCCC---CCcchhhHHHHHHHHHHHHhCCCCCCCCCc---------------hhhhHHHHhhccccCCCCC-----CC
Q psy12581         64 QKKPGD---RNLEACDMWSFAVLLWELATREVPFADLTP---------------MEVGMKVALEGLRITIPPG-----IS  120 (153)
Q Consensus        64 ~~~~~~---~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~---------------~~~~~~~~~~~~~~~~~~~-----~~  120 (153)
                      ......   .++.++|+||||+++||+++|..|+.....               ............++..+..     ..
T Consensus       185 ~~~~~~~~~~~~~k~Di~S~Gvvl~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~  264 (303)
T d1vjya_         185 DDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEAL  264 (303)
T ss_dssp             TTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGCHHH
T ss_pred             cccccccCCCcCcchhhhhhHHHHHHHhhCCCCCCcccccccchhhcccccchHHHHHHHHhccccCCCCCcccCChHHH
Confidence            754221   245789999999999999999877643111               1111112222333333332     22


Q ss_pred             HHHHHHHHHHhcCCCCCCCCHHHHHHHHhhhh
Q psy12581        121 SHLSKLIRICMNEDPGKRPTFDMVLPILDKMK  152 (153)
Q Consensus       121 ~~~~~l~~~cl~~~p~~Rps~~~~l~~L~~~~  152 (153)
                      ..+.+++.+||+.||++|||+.++++.|+++.
T Consensus       265 ~~l~~li~~cl~~dp~~Rps~~ei~~~L~~i~  296 (303)
T d1vjya_         265 RVMAKIMRECWYANGAARLTALRIKKTLSQLS  296 (303)
T ss_dssp             HHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHcccCHhHCcCHHHHHHHHHHHH
Confidence            45889999999999999999999999999875

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=6.1e-30  Score=171.65  Aligned_cols=139  Identities=15%  Similarity=0.138  Sum_probs=109.1

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc-------CCcccCCcccCccccccCCCCCCcchhhH
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ-------RGRCYYPAWMSPEALQKKPGDRNLEACDM   77 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~-------~~~~~~~~~~~pe~~~~~~~~~~~~~~dv   77 (153)
                      ..-++.|||+++|+|+||++.||+++.++.+|+.  |||.+...       ....||+.|++||.+....  ..+.++|+
T Consensus       111 il~~L~yLH~~~IiHrDiKpeNIl~~~~~~~kl~--DFG~a~~~~~~~~~~~~~~gt~~y~apE~~~~~~--~~~~~~Di  186 (298)
T d1gz8a_         111 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLA--DFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCK--YYSTAVDI  186 (298)
T ss_dssp             HHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEEC--STTHHHHHCCCSBCTTCCBCCCTTCCHHHHTTCS--SCCTHHHH
T ss_pred             HHHHHHHhhcCCEEccccCchheeecccCcceec--cCCcceeccCCcccceeecccceeeehhhhcccc--CCCccccc
Confidence            3457899999999999999999999999988888  99998322       2347899999999877543  23578999


Q ss_pred             HHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhcccc----------------CC-----------CCCCCHHHHHHHHHH
Q psy12581         78 WSFAVLLWELATREVPFADLTPMEVGMKVALEGLRI----------------TI-----------PPGISSHLSKLIRIC  130 (153)
Q Consensus        78 ~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~----------------~~-----------~~~~~~~~~~l~~~c  130 (153)
                      ||+|+++|++++|+.||.+.+.......+......+                ..           ....+..+.+++.+|
T Consensus       187 wSlGvily~m~~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~m  266 (298)
T d1gz8a_         187 WSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQM  266 (298)
T ss_dssp             HHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHH
T ss_pred             cccchhhhHHhhCCCCCCCCCHHHHHHHHHHhcCCCchhhccccccccccccccccccccchhhhccCCCHHHHHHHHHH
Confidence            999999999999999998776555544432210000                00           124568899999999


Q ss_pred             hcCCCCCCCCHHHHHHH
Q psy12581        131 MNEDPGKRPTFDMVLPI  147 (153)
Q Consensus       131 l~~~p~~Rps~~~~l~~  147 (153)
                      |+.||++|||++++++.
T Consensus       267 L~~dP~~R~t~~ell~H  283 (298)
T d1gz8a_         267 LHYDPNKRISAKAALAH  283 (298)
T ss_dssp             TCSSTTTSCCHHHHHTS
T ss_pred             ccCChhHCcCHHHHhCC
Confidence            99999999999999873

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.96  E-value=2.2e-30  Score=173.89  Aligned_cols=143  Identities=12%  Similarity=0.091  Sum_probs=107.4

Q ss_pred             chhhHHhhhhcCCCCCCCeeeeeeeecccc---chhhccccccccccc--------------CCcccCCcccCccccccC
Q psy12581          4 KKIVYSFYLNSKKSKTSNAFLFCCQIDEDL---TARINMADAQFSFQQ--------------RGRCYYPAWMSPEALQKK   66 (153)
Q Consensus         4 ~~~~~~~~lh~~~i~~~ni~~~~~~~~~~~---~~kl~~~d~g~~~~~--------------~~~~~~~~~~~pe~~~~~   66 (153)
                      ...-+++|||+++|+|+||++.||+++..+   .+++.  |||++...              ....||+.|+|||.+.+.
T Consensus       111 qi~~~l~~lH~~~iiHrDiKp~NIl~~~~~~~~~vkl~--DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~  188 (299)
T d1ckia_         111 QMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYII--DFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGI  188 (299)
T ss_dssp             HHHHHHHHHHHTTEECSCCCGGGEEECCGGGTTCEEEC--CCSSCEECBCTTTCCBCCCCBCCSCCCCSSSCCHHHHTTB
T ss_pred             HHHHHHHHHHHCCeeeccCCHhhccccccCCCceeeee--ccCcceeccccccccceeccccCCcCCCccccCHHHHhCC
Confidence            345678999999999999999999876433   35555  99998432              233689999999998865


Q ss_pred             CCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCchhhhHHH---Hhhc---cccCCCCCCCHHHHHHHHHHhcCCCCCCCC
Q psy12581         67 PGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVGMKV---ALEG---LRITIPPGISSHLSKLIRICMNEDPGKRPT  140 (153)
Q Consensus        67 ~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~---~~~~---~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps  140 (153)
                         .++.++|+||+|+++||+++|..||............   ....   .....+..+++++.+++.+||..+|++||+
T Consensus       189 ---~~~~~~DiwSlG~~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~li~~cl~~~p~~RP~  265 (299)
T d1ckia_         189 ---EQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPD  265 (299)
T ss_dssp             ---CCCHHHHHHHHHHHHHHHHHSSCTTCCCC-------HHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHHSCTTCCCC
T ss_pred             ---CCCChhhEEecCHHHHHHHhCCCcccccchHHHHHHHHHhhcccCCCChhHhccCCCHHHHHHHHHHccCChhHCcC
Confidence               3558999999999999999999999775544332221   1111   111234568899999999999999999999


Q ss_pred             HHHHHHHHhhh
Q psy12581        141 FDMVLPILDKM  151 (153)
Q Consensus       141 ~~~~l~~L~~~  151 (153)
                      ++++.+.|+.+
T Consensus       266 ~~~i~~~l~~~  276 (299)
T d1ckia_         266 YSYLRQLFRNL  276 (299)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHHH
Confidence            99998888765

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=7.1e-31  Score=177.71  Aligned_cols=139  Identities=17%  Similarity=0.115  Sum_probs=113.3

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccccC------CcccCCcccCccccccCCCCCCcchhhHH
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQR------GRCYYPAWMSPEALQKKPGDRNLEACDMW   78 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~------~~~~~~~~~~pe~~~~~~~~~~~~~~dv~   78 (153)
                      ..-++.|||+++|.|+||++.||+++.++..++.+.|||++....      ...+++.|++||.+.+.   .++.++|+|
T Consensus       111 i~~al~yLH~~~iiHrDlKp~NIll~~~~~~~ikl~DFG~~~~~~~~~~~~~~~~t~~y~ape~~~~~---~~~~~~DiW  187 (321)
T d1tkia_         111 VCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQHD---VVSTATDMW  187 (321)
T ss_dssp             HHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTCEEEEEESCGGGSCHHHHTTC---EECHHHHHH
T ss_pred             HHHHHHHHHHcCCCcccccccceeecCCCceEEEEcccchhhccccCCcccccccccccccchhccCC---CCCchhhcc
Confidence            346789999999999999999999997765555555999985432      23688999999998764   345899999


Q ss_pred             HHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccccC--CCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581         79 SFAVLLWELATREVPFADLTPMEVGMKVALEGLRIT--IPPGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus        79 s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      |+|+++|++++|..||.+.........+.......+  .+..+++++.+++.+||+.||++|||++++++
T Consensus       188 SlGvily~ll~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~  257 (321)
T d1tkia_         188 SLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQ  257 (321)
T ss_dssp             HHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred             cHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCChhhccCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence            999999999999999998887777666665443322  12367899999999999999999999999986

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=99.96  E-value=5e-30  Score=171.18  Aligned_cols=138  Identities=14%  Similarity=0.127  Sum_probs=107.6

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc-------CCcccCCcccCccccccCCCCCCcchhhH
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ-------RGRCYYPAWMSPEALQKKPGDRNLEACDM   77 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~-------~~~~~~~~~~~pe~~~~~~~~~~~~~~dv   77 (153)
                      ..-+++|||+++|+|+||++.||+++.++.+|+.  |||.+...       ....+++.|++||.+.+..  ..+.++|+
T Consensus       109 i~~~L~~LH~~~IvHrDiKp~NIll~~~~~~kl~--DfG~a~~~~~~~~~~~~~~~~~~y~~pE~~~~~~--~~~~~~Di  184 (286)
T d1ob3a_         109 LLNGIAYCHDRRVLHRDLKPQNLLINREGELKIA--DFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSK--KYSTTIDI  184 (286)
T ss_dssp             HHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEEC--CTTHHHHHCC---------CCCTTCCHHHHTTCC--SCCTHHHH
T ss_pred             HHHHHHHhccCcEEecCCCCceeeEcCCCCEEec--ccccceecccCccccceecccchhhhHHHHhCCC--CCCcceee
Confidence            3557899999999999999999999999999988  99998332       2336788999999987532  34689999


Q ss_pred             HHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhccc---------------------------cCCCCCCCHHHHHHHHHH
Q psy12581         78 WSFAVLLWELATREVPFADLTPMEVGMKVALEGLR---------------------------ITIPPGISSHLSKLIRIC  130 (153)
Q Consensus        78 ~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~~~~~l~~~c  130 (153)
                      ||+|++++++++|+.||.+........++......                           .......++.+.+++.+|
T Consensus       185 wslGv~l~el~~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~  264 (286)
T d1ob3a_         185 WSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKM  264 (286)
T ss_dssp             HHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHH
T ss_pred             hhcCcHHHHHHHCCCCCCCCCHHHHHHHHHHhhCCCChhhccchhhhhhcccccccccCcchhhhcccCCHHHHHHHHHH
Confidence            99999999999999999877655554443211000                           012344678999999999


Q ss_pred             hcCCCCCCCCHHHHHH
Q psy12581        131 MNEDPGKRPTFDMVLP  146 (153)
Q Consensus       131 l~~~p~~Rps~~~~l~  146 (153)
                      |+.||++|||++|+++
T Consensus       265 L~~dP~~R~s~~ell~  280 (286)
T d1ob3a_         265 LKLDPNQRITAKQALE  280 (286)
T ss_dssp             TCSSTTTSCCHHHHHT
T ss_pred             ccCChhHCcCHHHHhc
Confidence            9999999999999974

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=6.7e-30  Score=172.95  Aligned_cols=138  Identities=20%  Similarity=0.216  Sum_probs=110.6

Q ss_pred             hhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc--------CCcccCCcccCccccccCCCCCCcchhhH
Q psy12581          6 IVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ--------RGRCYYPAWMSPEALQKKPGDRNLEACDM   77 (153)
Q Consensus         6 ~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~--------~~~~~~~~~~~pe~~~~~~~~~~~~~~dv   77 (153)
                      .-++.|||++++.|+||+++||+++.++.+|+.  |||++...        ....|++.|++||.+.+... .++.++||
T Consensus       139 ~~al~~lH~~~ivHrDiKp~Nill~~~~~vkL~--DFG~a~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~-~~~~ksDI  215 (322)
T d1vzoa_         139 VLALEHLHKLGIIYRDIKLENILLDSNGHVVLT--DFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDS-GHDKAVDW  215 (322)
T ss_dssp             HHHHHHHHHTTCCCCCCCGGGEEECTTSCEEES--CSSEEEECCGGGGGGGCGGGSCCTTCCHHHHTTCC----CTHHHH
T ss_pred             HHHHHHhhcCCEEeccCCccceeecCCCCEEEe--eccchhhhcccccccccccccccccchhHHhhcCCc-CCCchhhh
Confidence            456889999999999999999999999998888  99998332        23478899999999875432 34578999


Q ss_pred             HHHHHHHHHHHhCCCCCCCCCchhhhHHHHhh--ccccCCCCCCCHHHHHHHHHHhcCCCCCCCC-----HHHHHH
Q psy12581         78 WSFAVLLWELATREVPFADLTPMEVGMKVALE--GLRITIPPGISSHLSKLIRICMNEDPGKRPT-----FDMVLP  146 (153)
Q Consensus        78 ~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~cl~~~p~~Rps-----~~~~l~  146 (153)
                      ||+|+++|++++|+.||.+.........+...  ...++.|...++.+.+++.+||+.||++|||     ++|+++
T Consensus       216 WSlG~iLyelltG~~PF~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~R~s~~~~t~~eil~  291 (322)
T d1vzoa_         216 WSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKE  291 (322)
T ss_dssp             HHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHT
T ss_pred             HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcccCCCCCcccCCHHHHHHHHHHcccCHHHcCCCCcccHHHHHc
Confidence            99999999999999999876655544444332  2245567789999999999999999999994     788875

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=3.3e-29  Score=171.18  Aligned_cols=139  Identities=17%  Similarity=0.127  Sum_probs=110.1

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc----CCcccCCcccCccccccCCCCCCcchhhHHHH
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ----RGRCYYPAWMSPEALQKKPGDRNLEACDMWSF   80 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~----~~~~~~~~~~~pe~~~~~~~~~~~~~~dv~s~   80 (153)
                      ..-++.|||+++|.|+||++.||+++.++.+|+.  |||.+...    ....+|+.|+|||.+.+..  ..+.++|+||+
T Consensus       130 i~~aL~~LH~~~IiHrDiKp~NIL~~~~~~~kl~--Dfg~a~~~~~~~~~~~~t~~y~aPE~~~~~~--~~~~~~DiwSl  205 (346)
T d1cm8a_         130 MLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKIL--DFGLARQADSEMTGYVVTRWYRAPEVILNWM--RYTQTVDIWSV  205 (346)
T ss_dssp             HHHHHHHHHHTTEECCCCCGGGEEECTTCCEEEC--CCTTCEECCSSCCSSCSCGGGCCTHHHHTTT--CCCTTHHHHHH
T ss_pred             HHHHHHHHHhCCCcccccCcchhhcccccccccc--cccceeccCCccccccccccccCHHHHcCCC--CCCccchhhcc
Confidence            3567899999999999999999999999999988  99998543    3457899999999986532  34578999999


Q ss_pred             HHHHHHHHhCCCCCCCCCchhhhHHHHhhcc-----------------------------ccCCCCCCCHHHHHHHHHHh
Q psy12581         81 AVLLWELATREVPFADLTPMEVGMKVALEGL-----------------------------RITIPPGISSHLSKLIRICM  131 (153)
Q Consensus        81 g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~-----------------------------~~~~~~~~~~~~~~l~~~cl  131 (153)
                      |++++++++|+.||.+...............                             ........++.+.+|+.+||
T Consensus       206 Gvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL  285 (346)
T d1cm8a_         206 GCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKML  285 (346)
T ss_dssp             HHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHS
T ss_pred             hHHHHHHHHCcCCCCCCChHHHHHHHHhccCCCcHHHHhhhcchhhhhhhccCCcccccchHHhccCCCHHHHHHHHHHC
Confidence            9999999999999987665444332211100                             01123456889999999999


Q ss_pred             cCCCCCCCCHHHHHHH
Q psy12581        132 NEDPGKRPTFDMVLPI  147 (153)
Q Consensus       132 ~~~p~~Rps~~~~l~~  147 (153)
                      +.||++|||++++++.
T Consensus       286 ~~dP~~R~ta~eiL~H  301 (346)
T d1cm8a_         286 VLDAEQRVTAGEALAH  301 (346)
T ss_dssp             CSSTTTSCCHHHHHHS
T ss_pred             cCChhHCcCHHHHhcC
Confidence            9999999999999863

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=4.3e-29  Score=168.85  Aligned_cols=138  Identities=17%  Similarity=0.080  Sum_probs=106.7

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc-----------CCcccCCcccCccccccCCCCCCcc
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ-----------RGRCYYPAWMSPEALQKKPGDRNLE   73 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~-----------~~~~~~~~~~~pe~~~~~~~~~~~~   73 (153)
                      ..-++.|||+++|.|+||+++||+++.++.+|+.  |||++...           ...+||+.|++||.+.+..  .++.
T Consensus       126 il~~l~~lH~~~ivHrDlKp~NILl~~~~~~kl~--dfg~~~~~~~~~~~~~~~~~~~~gT~~Y~aPE~~~~~~--~~~~  201 (318)
T d3blha1         126 LLNGLYYIHRNKILHRDMKAANVLITRDGVLKLA--DFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGER--DYGP  201 (318)
T ss_dssp             HHHHHHHHHHTTEECCCCCGGGEEECTTSCEEEC--CCTTCEECCC-----CCCCCSCCSCGGGCCHHHHTTCS--SCCT
T ss_pred             HHHHHHHhccCCEEecCcCchheeecCCCcEEee--ecceeeecccccccccccccceecCHHHhhHHHHcCCC--CCCc
Confidence            3557899999999999999999999999999888  99998322           2236899999999987532  3558


Q ss_pred             hhhHHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhcccc--CCC----------------------------CCCCHHH
Q psy12581         74 ACDMWSFAVLLWELATREVPFADLTPMEVGMKVALEGLRI--TIP----------------------------PGISSHL  123 (153)
Q Consensus        74 ~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~--~~~----------------------------~~~~~~~  123 (153)
                      ++|+||+|++++++++|+.||.+.........+.......  ...                            ...++.+
T Consensus       202 k~DiwSlGvil~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  281 (318)
T d3blha1         202 PIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYA  281 (318)
T ss_dssp             HHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTCCCC-------CCSSCCBCHHHHHHHHHCCHHH
T ss_pred             HHHcccCCceeeeHhhCCCCCCCCCHHHHHHHHHHhcCCCChhhccccchhhhhhhhcccccccccchhhhccccCCHHH
Confidence            9999999999999999999998766555444332211110  000                            0125677


Q ss_pred             HHHHHHHhcCCCCCCCCHHHHHH
Q psy12581        124 SKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus       124 ~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      .+++.+||+.||++|||++++++
T Consensus       282 ~dLl~~mL~~dP~~R~sa~elL~  304 (318)
T d3blha1         282 LDLIDKLLVLDPAQRIDSDDALN  304 (318)
T ss_dssp             HHHHHHHSCSSTTTSCCHHHHHH
T ss_pred             HHHHHHHCcCChhHCcCHHHHHc
Confidence            89999999999999999999985

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=3.5e-29  Score=170.99  Aligned_cols=138  Identities=14%  Similarity=0.114  Sum_probs=106.8

Q ss_pred             hhHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccc----------cCCcccCCcccCccccccCCCCCCcchh
Q psy12581          6 IVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQ----------QRGRCYYPAWMSPEALQKKPGDRNLEAC   75 (153)
Q Consensus         6 ~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~----------~~~~~~~~~~~~pe~~~~~~~~~~~~~~   75 (153)
                      .-++.|||+++|+|+||++.||+++.++.+||.  |||++..          .....|++.|++||.+...  ..++.++
T Consensus       119 l~al~yLH~~~iiHRDIKp~NILl~~~~~~kl~--DfG~a~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~--~~~~~~~  194 (345)
T d1pmea_         119 LRGLKYIHSANVLHRDLKPSNLLLNTTCDLKIC--DFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNS--KGYTKSI  194 (345)
T ss_dssp             HHHHHHHHHTTEECCCCCGGGEEECTTCCEEEC--CCTTCEECCGGGCBCCTTCCCCSCGGGCCGGGTTTB--CSCSTHH
T ss_pred             HHHHHHHHHCCCcCCCCCcceEEECCCCCEEEc--ccCceeeccCCCccceeeccccccceechHHHhhcC--CCCCchh
Confidence            457899999999999999999999999998988  9998832          2334688999999998543  2345889


Q ss_pred             hHHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhc----------------------ccc-------CCCCCCCHHHHHH
Q psy12581         76 DMWSFAVLLWELATREVPFADLTPMEVGMKVALEG----------------------LRI-------TIPPGISSHLSKL  126 (153)
Q Consensus        76 dv~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~----------------------~~~-------~~~~~~~~~~~~l  126 (153)
                      |+||+|++++++++|+.||.+..............                      ...       ......++.+.++
T Consensus       195 DiwSlG~il~eml~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~l  274 (345)
T d1pmea_         195 DIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDL  274 (345)
T ss_dssp             HHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHH
T ss_pred             hhhccCceehHHhhCCCCCCCCCHHHHHHHHhhhccCCChhhhhhhhhhhhhcccccCCccCCCCHHHhCCCCCHHHHHH
Confidence            99999999999999999998765443332221100                      000       0123467889999


Q ss_pred             HHHHhcCCCCCCCCHHHHHHH
Q psy12581        127 IRICMNEDPGKRPTFDMVLPI  147 (153)
Q Consensus       127 ~~~cl~~~p~~Rps~~~~l~~  147 (153)
                      +.+||+.||++|||++++++.
T Consensus       275 i~~~L~~dP~~R~ta~e~L~h  295 (345)
T d1pmea_         275 LDKMLTFNPHKRIEVEQALAH  295 (345)
T ss_dssp             HHHHSCSSTTTSCCHHHHHTS
T ss_pred             HHHHccCChhHCcCHHHHhcC
Confidence            999999999999999999863

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=4.1e-29  Score=170.91  Aligned_cols=139  Identities=14%  Similarity=0.054  Sum_probs=108.4

Q ss_pred             chhhHHhhhhcCCCCCCCeeeeeeeecccc-chhhccccccccccc------CCcccCCcccCccccccCCCCCCcchhh
Q psy12581          4 KKIVYSFYLNSKKSKTSNAFLFCCQIDEDL-TARINMADAQFSFQQ------RGRCYYPAWMSPEALQKKPGDRNLEACD   76 (153)
Q Consensus         4 ~~~~~~~~lh~~~i~~~ni~~~~~~~~~~~-~~kl~~~d~g~~~~~------~~~~~~~~~~~pe~~~~~~~~~~~~~~d   76 (153)
                      ...-+++|||+++|.|+||++.||+++.++ .+||.  |||++...      ....|++.|++||.+.+..  .++.++|
T Consensus       130 qil~aL~yLH~~~IiHrDiKp~NILl~~~~~~~kl~--DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~--~~~~~~D  205 (350)
T d1q5ka_         130 QLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLC--DFGSAKQLVRGEPNVSYICSRYYRAPELIFGAT--DYTSSID  205 (350)
T ss_dssp             HHHHHHHHHHTTTEECCCCCGGGEEECTTTCCEEEC--CCTTCEECCTTSCCCSCCSCTTSCCHHHHTTCS--SCCTHHH
T ss_pred             HHHHHHHHHHhcCCcccCCCcceEEEecCCCceeEe--cccchhhccCCcccccccccccccChHHhhccc--CCCccee
Confidence            345678999999999999999999999875 77888  99998432      2347889999999876532  3558999


Q ss_pred             HHHHHHHHHHHHhCCCCCCCCCchhhhHHHHhhc---------------ccc------------CCCCCCCHHHHHHHHH
Q psy12581         77 MWSFAVLLWELATREVPFADLTPMEVGMKVALEG---------------LRI------------TIPPGISSHLSKLIRI  129 (153)
Q Consensus        77 v~s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~---------------~~~------------~~~~~~~~~~~~l~~~  129 (153)
                      +||+|+++||+++|+.||...........+....               ...            ......++.+.+++.+
T Consensus       206 IwSlG~il~el~~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~  285 (350)
T d1q5ka_         206 VWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSR  285 (350)
T ss_dssp             HHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCC---CCCCCCCCCCCGGGTSCTTSCHHHHHHHHH
T ss_pred             ecccceEEEehhhCCCCCCCCCHHHHHHHHHHHhCCChHHhhhhhccchhhccccccccCchhhhcccCCCHHHHHHHHH
Confidence            9999999999999999998776555444332110               000            0123468899999999


Q ss_pred             HhcCCCCCCCCHHHHHH
Q psy12581        130 CMNEDPGKRPTFDMVLP  146 (153)
Q Consensus       130 cl~~~p~~Rps~~~~l~  146 (153)
                      ||+.||++|||+.|+++
T Consensus       286 mL~~dP~~R~ta~e~L~  302 (350)
T d1q5ka_         286 LLEYTPTARLTPLEACA  302 (350)
T ss_dssp             HSCSSGGGSCCHHHHHT
T ss_pred             HccCChhHCcCHHHHhc
Confidence            99999999999999985

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=99.96  E-value=6.4e-29  Score=166.27  Aligned_cols=142  Identities=10%  Similarity=0.056  Sum_probs=109.1

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeecc-----ccchhhccccccccccc--------------CCcccCCcccCcccccc
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDE-----DLTARINMADAQFSFQQ--------------RGRCYYPAWMSPEALQK   65 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~-----~~~~kl~~~d~g~~~~~--------------~~~~~~~~~~~pe~~~~   65 (153)
                      ..-+++|||+++|.|+||++.||+++.     ++.+++.  |||++...              ....||+.|+|||.+.+
T Consensus       110 ~~~~l~~lH~~giiHrDiKp~Nili~~~~~~~~~~vkl~--DFG~a~~~~~~~~~~~~~~~~~~~~~GT~~y~aPE~~~~  187 (293)
T d1csna_         110 MLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVV--DFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLG  187 (293)
T ss_dssp             HHHHHHHHHTTTEECCCCCGGGEEECCSSSTTTTCEEEC--CCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTT
T ss_pred             HHHHHHHHHHCCceeccCCccceeecCcccccCCceEEc--ccceeEEcccCccccceeecccCceEEchhhcCHHHhcC
Confidence            345689999999999999999999975     3455666  99998421              23368999999999986


Q ss_pred             CCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCchhhh---HHHHhhcc---ccCCCCCCCHHHHHHHHHHhcCCCCCCC
Q psy12581         66 KPGDRNLEACDMWSFAVLLWELATREVPFADLTPMEVG---MKVALEGL---RITIPPGISSHLSKLIRICMNEDPGKRP  139 (153)
Q Consensus        66 ~~~~~~~~~~dv~s~g~~~~~~~~g~~p~~~~~~~~~~---~~~~~~~~---~~~~~~~~~~~~~~l~~~cl~~~p~~Rp  139 (153)
                      .   .++.++|+||+|+++|++++|..||.+.......   .++.....   ....+..+++++.+++..|+..+|++||
T Consensus       188 ~---~~~~~~DiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~ii~~~~~~~~~~rP  264 (293)
T d1csna_         188 R---EQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLRELCAGFPEEFYKYMHYARNLAFDATP  264 (293)
T ss_dssp             C---CCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHHCCTTCCC
T ss_pred             C---CCChHHHHHHhhHHHHHHHhCCCcCCCccchhHHHHHHHHHhccCCCChHHhcCCCCHHHHHHHHHHhcCCcccCc
Confidence            4   4568999999999999999999999765443222   12211111   1123456789999999999999999999


Q ss_pred             CHHHHHHHHhhh
Q psy12581        140 TFDMVLPILDKM  151 (153)
Q Consensus       140 s~~~~l~~L~~~  151 (153)
                      +++.+.+.|+++
T Consensus       265 ~y~~l~~~l~~~  276 (293)
T d1csna_         265 DYDYLQGLFSKV  276 (293)
T ss_dssp             CHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHH
Confidence            999998888765

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=3.3e-28  Score=166.26  Aligned_cols=138  Identities=17%  Similarity=0.111  Sum_probs=106.1

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc----CCcccCCcccCccccccCCCCCCcchhhHHHH
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ----RGRCYYPAWMSPEALQKKPGDRNLEACDMWSF   80 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~----~~~~~~~~~~~pe~~~~~~~~~~~~~~dv~s~   80 (153)
                      ..-++.|||+++|.|+||++.||+++.++.+|+.  |||.+...    ....|++.|++||...+..  ..+.++|+||+
T Consensus       130 il~aL~~LH~~giiHrDiKp~NILi~~~~~~kl~--dfg~a~~~~~~~~~~~g~~~y~apE~~~~~~--~~~~~~DiwSl  205 (348)
T d2gfsa1         130 ILRGLKYIHSADIIHRDLKPSNLAVNEDCELKIL--DFGLARHTDDEMTGYVATRWYRAPEIMLNWM--HYNQTVDIWSV  205 (348)
T ss_dssp             HHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEEC--CC----CCTGGGSSSCHHHHTSCHHHHTTCS--CCCTTHHHHHH
T ss_pred             HHHHHHHHHhCCCcccccCCcccccccccccccc--ccchhcccCcccccccccccccCchhhcCCc--cCCcccchhhh
Confidence            4567899999999999999999999999999988  99998433    3456788999999876542  34578999999


Q ss_pred             HHHHHHHHhCCCCCCCCCchhhhHHHHhhcccc---------------------C--------CCCCCCHHHHHHHHHHh
Q psy12581         81 AVLLWELATREVPFADLTPMEVGMKVALEGLRI---------------------T--------IPPGISSHLSKLIRICM  131 (153)
Q Consensus        81 g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~---------------------~--------~~~~~~~~~~~l~~~cl  131 (153)
                      |+++|++++|+.||.+.+.......+.......                     .        .....++.+.+++.+||
T Consensus       206 Gv~l~~ll~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL  285 (348)
T d2gfsa1         206 GCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKML  285 (348)
T ss_dssp             HHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCCCHHHHHHHTTSCCCCCCCHHHHSTTCCHHHHHHHHHHS
T ss_pred             hHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhccchhhhhhhhhcccCCCcchhhhcCCCCHHHHHHHHHHC
Confidence            999999999999998776554444332211100                     0        01346789999999999


Q ss_pred             cCCCCCCCCHHHHHH
Q psy12581        132 NEDPGKRPTFDMVLP  146 (153)
Q Consensus       132 ~~~p~~Rps~~~~l~  146 (153)
                      +.||++|||++++++
T Consensus       286 ~~dP~~R~ta~elL~  300 (348)
T d2gfsa1         286 VLDSDKRITAAQALA  300 (348)
T ss_dssp             CSSGGGSCCHHHHHT
T ss_pred             cCChhhCcCHHHHhc
Confidence            999999999999986

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=2.3e-27  Score=158.56  Aligned_cols=137  Identities=12%  Similarity=0.077  Sum_probs=103.4

Q ss_pred             hhHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccccC-------CcccCCcccCccccccCCCCCCcchhhHH
Q psy12581          6 IVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQR-------GRCYYPAWMSPEALQKKPGDRNLEACDMW   78 (153)
Q Consensus         6 ~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~-------~~~~~~~~~~pe~~~~~~~~~~~~~~dv~   78 (153)
                      .-+++|||+++|.|+||++.||+++.++.+|+.  |||.+....       ...+++.|++||.+....  ..+.++|+|
T Consensus       111 ~~aL~~lH~~~IvHrDiKP~NIli~~~~~~kl~--DFG~a~~~~~~~~~~~~~~~~~~~~~pe~~~~~~--~~~~~~Diw  186 (292)
T d1unla_         111 LKGLGFCHSRNVLHRDLKPQNLLINRNGELKLA--NFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAK--LYSTSIDMW  186 (292)
T ss_dssp             HHHHHHHHHTTEECCCCSGGGEEECTTCCEEEC--CCTTCEECCSCCSCCCSCCSCGGGCCHHHHTTCS--CCCTHHHHH
T ss_pred             HHHHHHhhcCCEeeecccCcccccccCCceeee--ecchhhcccCCCccceeeccccchhhhhHhccCC--CCCchhhcc
Confidence            456899999999999999999999999988888  999984331       235667899999887542  245899999


Q ss_pred             HHHHHHHHHHhCCCCCCCCCc-hhhhHHHHhhcc---------------------------ccCCCCCCCHHHHHHHHHH
Q psy12581         79 SFAVLLWELATREVPFADLTP-MEVGMKVALEGL---------------------------RITIPPGISSHLSKLIRIC  130 (153)
Q Consensus        79 s~g~~~~~~~~g~~p~~~~~~-~~~~~~~~~~~~---------------------------~~~~~~~~~~~~~~l~~~c  130 (153)
                      |+|++++++++|..||..... ......+.....                           ....+...++.+.+++.+|
T Consensus       187 SlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~m  266 (292)
T d1unla_         187 SAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNL  266 (292)
T ss_dssp             HHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHH
T ss_pred             ccchHHHHHhhCCCCCCCCCCHHHHHHHHHhhcCCCChhhhhhhhhcccccccccccccchhhhccccCCHHHHHHHHHH
Confidence            999999999999988654333 332222211000                           0012234678999999999


Q ss_pred             hcCCCCCCCCHHHHHH
Q psy12581        131 MNEDPGKRPTFDMVLP  146 (153)
Q Consensus       131 l~~~p~~Rps~~~~l~  146 (153)
                      |+.||.+|||++|+++
T Consensus       267 L~~dP~~R~sa~e~L~  282 (292)
T d1unla_         267 LKCNPVQRISAEEALQ  282 (292)
T ss_dssp             SCSSGGGSCCHHHHTT
T ss_pred             ccCChhHCcCHHHHhc
Confidence            9999999999999986

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=99.94  E-value=1.4e-27  Score=162.00  Aligned_cols=139  Identities=17%  Similarity=0.088  Sum_probs=103.9

Q ss_pred             chhhHHhhhhcCCCCCCCeeeeeeeecccc-chhhccccccccccc------CCcccCCcccCccccccCCCCCCcchhh
Q psy12581          4 KKIVYSFYLNSKKSKTSNAFLFCCQIDEDL-TARINMADAQFSFQQ------RGRCYYPAWMSPEALQKKPGDRNLEACD   76 (153)
Q Consensus         4 ~~~~~~~~lh~~~i~~~ni~~~~~~~~~~~-~~kl~~~d~g~~~~~------~~~~~~~~~~~pe~~~~~~~~~~~~~~d   76 (153)
                      ...-++.|||+++|.|+||++.||+++.++ .+|+.  |||++...      ....+|+.|++||.+.+..  .++.++|
T Consensus       137 qil~aL~~LH~~gIvHrDiKp~NILi~~~~~~vkl~--DFG~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~--~~~~~~D  212 (328)
T d3bqca1         137 EILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLI--DWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQ--MYDYSLD  212 (328)
T ss_dssp             HHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEEC--CGGGCEECCTTCCCCSCCSCGGGCCHHHHTTCC--CCCTHHH
T ss_pred             HHHHHHHHHhhcccccccccccceEEcCCCCeeeec--ccccceeccCCCcccccccCccccCcccccCCC--CCCcccc
Confidence            345678999999999999999999998654 57777  99998432      3346889999999987642  3458999


Q ss_pred             HHHHHHHHHHHHhCCCCCCCCCchhhh-HHHHh-------------hc----------------------cccCCCCCCC
Q psy12581         77 MWSFAVLLWELATREVPFADLTPMEVG-MKVAL-------------EG----------------------LRITIPPGIS  120 (153)
Q Consensus        77 v~s~g~~~~~~~~g~~p~~~~~~~~~~-~~~~~-------------~~----------------------~~~~~~~~~~  120 (153)
                      +||+|++++++++|..||......... ..+..             ..                      .........+
T Consensus       213 iwslG~~l~e~~~g~~pf~~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s  292 (328)
T d3bqca1         213 MWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVS  292 (328)
T ss_dssp             HHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCCGGGGGTCCCCCCCCGGGGCCTTTGGGCC
T ss_pred             hhhhhhhhHHhccCCCCCCCCchhHHHHHHHHHHHCCchhhhhhhhcccccCcccchhcccccccchhhcccccccccCC
Confidence            999999999999999999765432211 11000             00                      0000112367


Q ss_pred             HHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581        121 SHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus       121 ~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      +++.+|+++||+.||++|||++++++
T Consensus       293 ~~~~dli~~mL~~dP~~R~ta~e~L~  318 (328)
T d3bqca1         293 PEALDFLDKLLRYDHQSRLTAREAME  318 (328)
T ss_dssp             HHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             HHHHHHHHHHccCChhHCcCHHHHhc
Confidence            88999999999999999999999986

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=1.3e-27  Score=163.63  Aligned_cols=137  Identities=18%  Similarity=0.148  Sum_probs=101.4

Q ss_pred             hhhHHhhhhcCCCCCCCeeeeeeeeccccchhhccccccccccc------CCcccCCcccCccccccCCCCCCcchhhHH
Q psy12581          5 KIVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQ------RGRCYYPAWMSPEALQKKPGDRNLEACDMW   78 (153)
Q Consensus         5 ~~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~------~~~~~~~~~~~pe~~~~~~~~~~~~~~dv~   78 (153)
                      ...++.|||+++|.|+||++.||+++.++..++.  |||.+...      ....+|+.|+|||.+.+.   .++.++|+|
T Consensus       128 il~gl~~LH~~giiHrDlKP~Nil~~~~~~~kl~--df~~~~~~~~~~~~~~~~~t~~y~aPE~l~~~---~~~~~~Diw  202 (355)
T d2b1pa1         128 MLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKIL--DFGLARTAGTSFMMTPYVVTRYYRAPEVILGM---GYKENVDIW  202 (355)
T ss_dssp             HHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEEC--CCCC---------------CCTTCCHHHHTTC---CCCTTHHHH
T ss_pred             HHHHHHHhhhcccccccCCccccccccccceeee--chhhhhccccccccccccccccccChhhhcCC---CCCCCcccc
Confidence            3567899999999999999999999999999988  99987332      334789999999999864   445889999


Q ss_pred             HHHHHHHHHHhCCCCCCCCCchhhhHHHHhhcc----------------------ccC------------CC------CC
Q psy12581         79 SFAVLLWELATREVPFADLTPMEVGMKVALEGL----------------------RIT------------IP------PG  118 (153)
Q Consensus        79 s~g~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~----------------------~~~------------~~------~~  118 (153)
                      |+|++++++++|+.||.+.+.......+.....                      ...            .+      ..
T Consensus       203 SlG~~l~ell~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  282 (355)
T d2b1pa1         203 SVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKL  282 (355)
T ss_dssp             HHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHTTSCHHHHHHHHTSCCCCCCCHHHHSCGGGSCCSSHHHHH
T ss_pred             cccchHHHHhhCCCCCCCCCHHHHHHHHHHhccCCCHHHHHHhhhhHHHHhhcCcccccccccccccccccccccccccc
Confidence            999999999999999987654443332221000                      000            00      01


Q ss_pred             CCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581        119 ISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus       119 ~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                      .++.+.+|+++||+.||++|||++++++
T Consensus       283 ~s~~~~dll~~mL~~dP~~R~ta~elL~  310 (355)
T d2b1pa1         283 KASQARDLLSKMLVIDPAKRISVDDALQ  310 (355)
T ss_dssp             HHHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred             CCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence            2457899999999999999999999984

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.92  E-value=5.7e-26  Score=155.77  Aligned_cols=138  Identities=17%  Similarity=0.157  Sum_probs=97.6

Q ss_pred             hhHHhhhhc-CCCCCCCeeeeeeeeccccc----hhhccccccccccc----CCcccCCcccCccccccCCCCCCcchhh
Q psy12581          6 IVYSFYLNS-KKSKTSNAFLFCCQIDEDLT----ARINMADAQFSFQQ----RGRCYYPAWMSPEALQKKPGDRNLEACD   76 (153)
Q Consensus         6 ~~~~~~lh~-~~i~~~ni~~~~~~~~~~~~----~kl~~~d~g~~~~~----~~~~~~~~~~~pe~~~~~~~~~~~~~~d   76 (153)
                      .-++.|||+ ++|.|+||++.||+++.++.    .++++.|||.+...    ....+++.|+|||.+...   .++.++|
T Consensus       135 l~al~~lh~~~~IvHrDlKp~NIll~~~~~~~~~~~~kl~dfg~s~~~~~~~~~~~gt~~y~aPE~~~~~---~~~~~~D  211 (362)
T d1q8ya_         135 LLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYTNSIQTREYRSPEVLLGA---PWGCGAD  211 (362)
T ss_dssp             HHHHHHHHHTTCEECSCCSGGGEEEEEEETTTTEEEEEECCCTTCEETTBCCCSCCSCGGGCCHHHHHTC---CCCTHHH
T ss_pred             HHHHHHHhhhcCcccccCChhHeeeeccCcccccceeeEeecccccccccccccccccccccChhhcccc---CCCcccc
Confidence            456789997 88999999999999987764    23445599998433    345789999999998864   3458999


Q ss_pred             HHHHHHHHHHHHhCCCCCCCCCchh------hhHHHHh-----------hc-----------c-----------------
Q psy12581         77 MWSFAVLLWELATREVPFADLTPME------VGMKVAL-----------EG-----------L-----------------  111 (153)
Q Consensus        77 v~s~g~~~~~~~~g~~p~~~~~~~~------~~~~~~~-----------~~-----------~-----------------  111 (153)
                      +||+|++++++++|+.||.......      .......           ..           .                 
T Consensus       212 iwSlG~il~el~~g~~pF~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  291 (362)
T d1q8ya_         212 IWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLT  291 (362)
T ss_dssp             HHHHHHHHHHHHHSSCCC---------CHHHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHH
T ss_pred             ccchHHHHHHHHHCCCCCCCCccccccchhHHHHHHHHHhCCCCHHHhhcccccccccccchhhhccccccCCchhhhcc
Confidence            9999999999999999986432110      0000000           00           0                 


Q ss_pred             -ccCCCCCCCHHHHHHHHHHhcCCCCCCCCHHHHHH
Q psy12581        112 -RITIPPGISSHLSKLIRICMNEDPGKRPTFDMVLP  146 (153)
Q Consensus       112 -~~~~~~~~~~~~~~l~~~cl~~~p~~Rps~~~~l~  146 (153)
                       ....+...++.+.+|+.+||+.||.+|||++++++
T Consensus       292 ~~~~~~~~~~~~~~dll~~mL~~dP~~Rpta~e~L~  327 (362)
T d1q8ya_         292 EKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVN  327 (362)
T ss_dssp             HTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHT
T ss_pred             cccccCcccCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence             00011123567899999999999999999999986

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=98.22  E-value=1e-07  Score=58.73  Aligned_cols=41  Identities=10%  Similarity=-0.037  Sum_probs=33.6

Q ss_pred             hhHHhhhhcCCCCCCCeeeeeeeeccccchhhcccccccccccC
Q psy12581          6 IVYSFYLNSKKSKTSNAFLFCCQIDEDLTARINMADAQFSFQQR   49 (153)
Q Consensus         6 ~~~~~~lh~~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~~~~~   49 (153)
                      .-+..|||++++.|+||++.||+++.++ +++.  |||.+....
T Consensus       113 ~~~l~~lH~~giiHrDiKP~NILv~~~~-~~li--DFG~a~~~~  153 (191)
T d1zara2         113 LEEVAKFYHRGIVHGDLSQYNVLVSEEG-IWII--DFPQSVEVG  153 (191)
T ss_dssp             HHHHHHHHHTTEECSCCSTTSEEEETTE-EEEC--CCTTCEETT
T ss_pred             HHHHHHHhhCCEEEccCChhheeeeCCC-EEEE--ECCCcccCC
Confidence            4567899999999999999999999765 5555  999886543

>d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Homoserine kinase ThrB
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=82.42  E-value=0.099  Score=33.54  Aligned_cols=29  Identities=14%  Similarity=0.019  Sum_probs=22.5

Q ss_pred             CCCCCCCeeeeeeeeccccchhhcccccccc
Q psy12581         15 KKSKTSNAFLFCCQIDEDLTARINMADAQFS   45 (153)
Q Consensus        15 ~~i~~~ni~~~~~~~~~~~~~kl~~~d~g~~   45 (153)
                      .+++|+|+..+|++++.+...-  +.||+.+
T Consensus       183 ~giIHgDl~~dNvl~~~~~v~g--vIDF~~~  211 (316)
T d2ppqa1         183 AGVIHADLFQDNVFFLGDELSG--LIDFYFA  211 (316)
T ss_dssp             EEEECSCCCGGGEEEETTEEEE--ECCCTTC
T ss_pred             cccccCCcchhhhhccccccee--Eeccccc
Confidence            5678999999999999876433  4499865

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.01  E-value=0.34  Score=31.19  Aligned_cols=30  Identities=10%  Similarity=-0.025  Sum_probs=20.7

Q ss_pred             hHHh-hhhcCCCCCCCeeee---eeeeccccchh
Q psy12581          7 VYSF-YLNSKKSKTSNAFLF---CCQIDEDLTAR   36 (153)
Q Consensus         7 ~~~~-~lh~~~i~~~ni~~~---~~~~~~~~~~k   36 (153)
                      +|.+ -+.||||||+||++.   ++.+.+-|..+
T Consensus       120 LH~~~~IiHRDiKP~NILl~~~~~vkl~DFGla~  153 (322)
T d1s9ja_         120 LREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSG  153 (322)
T ss_dssp             HHHHHCCCCSCCSGGGEEECTTCCEEECCCCCCH
T ss_pred             HHHhCCEEccccCHHHeeECCCCCEEEeeCCCcc
Confidence            3444 388899999999984   45665555443