Query psy12583
Match_columns 96
No_of_seqs 102 out of 1041
Neff 7.1
Searched_HMMs 29240
Date Fri Aug 16 23:03:50 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy12583.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/12583hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3i18_A LMO2051 protein; alpha- 99.6 1.9E-15 6.4E-20 94.4 10.2 80 8-96 15-97 (100)
2 2kjp_A Uncharacterized protein 99.6 1.2E-15 4.3E-20 94.2 4.9 73 8-89 9-85 (91)
3 2kl1_A YLBL protein; structure 99.6 2E-14 7E-19 88.9 8.1 73 8-89 13-89 (94)
4 2zpm_A Regulator of sigma E pr 99.5 2.3E-14 8E-19 87.2 7.5 74 8-89 12-89 (91)
5 3rle_A Golgi reassembly-stacki 99.4 1.3E-13 4.6E-18 95.8 5.6 74 8-89 120-196 (209)
6 2i6v_A General secretion pathw 99.4 5E-13 1.7E-17 81.2 6.3 58 9-74 28-86 (87)
7 3id1_A Regulator of sigma E pr 99.4 1.6E-12 5.5E-17 80.4 7.5 63 8-77 10-74 (95)
8 2l97_A HTRA, putative serine p 99.4 3.7E-12 1.3E-16 83.2 9.4 61 8-77 65-126 (134)
9 2i4s_A General secretion pathw 99.3 1.9E-12 6.7E-17 81.1 6.5 58 9-74 46-104 (105)
10 2hga_A Conserved protein MTH13 99.3 4E-12 1.4E-16 82.6 8.1 72 8-90 33-106 (125)
11 1qau_A Neuronal nitric oxide s 99.3 5E-12 1.7E-16 79.5 7.5 64 8-77 34-98 (112)
12 3cyy_A Tight junction protein 99.3 3.1E-12 1.1E-16 77.6 5.8 61 8-75 31-92 (92)
13 2pzd_A Serine protease HTRA2; 99.3 6.8E-12 2.3E-16 79.1 7.1 60 8-77 43-102 (113)
14 1wf7_A Enigma homologue protei 99.3 1.6E-12 5.4E-17 81.0 3.5 63 8-77 37-99 (103)
15 2p3w_A Probable serine proteas 99.3 7.1E-12 2.4E-16 79.0 5.8 60 8-77 43-102 (112)
16 2awx_A Synapse associated prot 99.3 8.5E-12 2.9E-16 77.8 6.0 64 8-78 41-105 (105)
17 1te0_A Protease DEGS; two doma 99.3 1.8E-11 6.2E-16 89.4 8.2 62 8-77 252-314 (318)
18 2vz5_A TAX1-binding protein 3; 99.2 1E-11 3.5E-16 81.7 5.9 62 8-75 72-133 (139)
19 2vsp_A PDZ domain-containing p 99.2 1.2E-11 4E-16 75.3 5.5 54 8-68 35-88 (91)
20 2pkt_A PDZ and LIM domain prot 99.2 3.6E-12 1.2E-16 77.5 3.2 55 8-69 35-89 (91)
21 3stj_A Protease DEGQ; serine p 99.2 1.7E-11 5.7E-16 91.1 7.2 62 8-77 271-333 (345)
22 2pa1_A PDZ and LIM domain prot 99.2 1.9E-11 6.5E-16 73.7 6.0 52 8-65 34-85 (87)
23 1y8t_A Hypothetical protein RV 99.2 4.2E-11 1.4E-15 87.5 8.9 62 8-77 250-313 (324)
24 2v90_A PDZ domain-containing p 99.2 5.2E-12 1.8E-16 77.5 3.2 54 8-68 38-91 (96)
25 2eaq_A LIM domain only protein 99.2 7E-12 2.4E-16 75.9 3.7 53 8-65 36-89 (90)
26 1wh1_A KIAA1095 protein; PDZ d 99.2 5.1E-12 1.7E-16 81.3 2.9 61 8-76 56-117 (124)
27 1vb7_A PDZ and LIM domain 2; P 99.2 1.8E-11 6.2E-16 74.9 5.1 52 8-65 38-89 (94)
28 2uzc_A Human pdlim5, PDZ and L 99.2 3.9E-11 1.3E-15 72.3 6.3 52 8-65 35-86 (88)
29 2q3g_A PDZ and LIM domain prot 99.2 2.8E-11 9.7E-16 73.2 5.6 52 8-65 35-86 (89)
30 3rle_A Golgi reassembly-stacki 99.2 6E-11 2E-15 82.3 7.8 77 8-91 24-104 (209)
31 3sfj_A TAX1-binding protein 3; 99.2 4.1E-11 1.4E-15 74.3 6.0 52 8-64 53-104 (104)
32 2eeh_A PDZ domain-containing p 99.2 3.6E-11 1.2E-15 74.3 5.6 51 8-65 44-94 (100)
33 1v5l_A PDZ and LIM domain 3; a 99.2 3.9E-11 1.3E-15 74.6 5.5 54 8-68 37-90 (103)
34 2jil_A GRIP1 protein, glutamat 99.2 2.1E-11 7.2E-16 74.7 4.2 52 8-65 40-92 (97)
35 2eeg_A PDZ and LIM domain prot 99.2 5.3E-11 1.8E-15 72.8 6.0 52 8-65 40-91 (94)
36 2edz_A PDZ domain-containing p 99.2 4.2E-12 1.4E-16 80.4 1.0 61 8-75 46-106 (114)
37 2yub_A LIMK-2, LIM domain kina 99.2 1.2E-11 4.2E-16 79.4 3.2 53 10-71 56-110 (118)
38 1b8q_A Protein (neuronal nitri 99.2 2.1E-11 7.2E-16 78.3 4.2 63 8-76 41-104 (127)
39 1ihj_A INAD; intermolecular di 99.2 6E-11 2E-15 72.8 6.1 52 8-65 45-97 (98)
40 1kwa_A Hcask/LIN-2 protein; PD 99.2 4.8E-11 1.6E-15 72.6 5.5 52 8-65 33-85 (88)
41 2opg_A Multiple PDZ domain pro 99.1 7.7E-11 2.6E-15 72.3 5.8 55 8-69 38-93 (98)
42 1n7e_A AMPA receptor interacti 99.1 1E-10 3.4E-15 71.9 6.1 52 8-65 38-90 (97)
43 1um1_A KIAA1849 protein, RSGI 99.1 1.2E-11 4.2E-16 77.6 1.9 63 8-77 44-107 (110)
44 2vsv_A Rhophilin-2; scaffold p 99.1 8.8E-11 3E-15 74.6 5.8 53 8-65 52-104 (109)
45 2jxo_A Ezrin-radixin-moesin-bi 99.1 2.3E-11 8E-16 74.7 2.9 53 8-65 41-93 (98)
46 1uf1_A KIAA1526 protein; PDZ d 99.1 3E-11 1E-15 77.8 3.2 62 8-77 54-115 (128)
47 2jre_A C60-1 PDZ domain peptid 99.1 5.1E-11 1.7E-15 74.4 4.1 52 8-65 52-104 (108)
48 3bpu_A Membrane-associated gua 99.1 2.5E-10 8.4E-15 68.8 7.1 52 8-65 34-86 (88)
49 1uep_A Membrane associated gua 99.1 9.4E-11 3.2E-15 72.9 5.3 53 8-65 42-96 (103)
50 3khf_A Microtubule-associated 99.1 9.9E-11 3.4E-15 72.0 5.3 52 8-65 42-93 (99)
51 2i04_A Membrane-associated gua 99.1 1.4E-10 4.9E-15 69.4 5.9 51 8-63 33-85 (85)
52 1lcy_A HTRA2 serine protease; 99.1 1.4E-10 4.8E-15 85.1 7.0 59 8-76 264-322 (325)
53 2f5y_A Regulator of G-protein 99.1 1.7E-10 5.9E-15 70.1 6.3 52 8-65 32-83 (91)
54 2rcz_A Tight junction protein 99.1 1.3E-10 4.4E-15 68.5 5.5 52 8-65 29-81 (81)
55 4amh_A Disks large homolog 1; 99.1 3.2E-10 1.1E-14 71.0 7.6 52 8-65 40-92 (106)
56 1d5g_A Human phosphatase HPTP1 99.1 1.7E-10 5.6E-15 70.6 6.2 52 8-65 41-93 (96)
57 1w9e_A Syntenin 1; cell adhesi 99.1 1.2E-10 4.2E-15 77.7 6.1 73 8-89 35-107 (166)
58 2kv8_A RGS12, regulator of G-p 99.1 3E-10 1E-14 67.8 7.2 52 8-65 31-82 (83)
59 2d90_A PDZ domain containing p 99.1 1.9E-10 6.4E-15 71.2 6.5 52 8-65 38-89 (102)
60 1rgw_A ZAsp protein; PDZ, cyph 99.1 1.3E-10 4.3E-15 69.5 5.4 52 8-65 33-84 (85)
61 2g5m_B Neurabin-2; spinophilin 99.1 2.1E-11 7.3E-16 76.8 2.0 62 8-76 43-105 (113)
62 4a8c_A Periplasmic PH-dependen 99.1 2.9E-10 9.8E-15 86.5 8.6 62 8-78 371-432 (436)
63 2dls_A PDZ-rhogef, RHO guanine 99.1 2.6E-10 8.9E-15 69.7 6.8 51 8-65 37-87 (93)
64 1x5q_A LAP4 protein; PDZ domai 99.1 1.2E-10 3.9E-15 73.1 5.2 54 8-68 54-107 (110)
65 3qo6_A Protease DO-like 1, chl 99.1 1.1E-10 3.6E-15 86.5 5.8 62 8-77 259-332 (348)
66 2he4_A Na(+)/H(+) exchange reg 99.1 1.2E-10 4E-15 70.6 5.0 52 8-65 36-87 (90)
67 1uew_A Membrane associated gua 99.1 1.9E-10 6.7E-15 72.6 6.2 52 8-65 51-103 (114)
68 2o2t_A Multiple PDZ domain pro 99.1 4E-11 1.4E-15 76.0 3.0 55 8-68 57-112 (117)
69 1whd_A RGS3, regulator of G-pr 99.1 2E-10 6.9E-15 71.1 6.1 52 8-65 44-95 (100)
70 2iwo_A Multiple PDZ domain pro 99.1 4.9E-11 1.7E-15 76.5 3.3 55 8-69 61-116 (120)
71 2kom_A Partitioning defective 99.1 2E-10 7E-15 73.5 6.3 53 8-65 66-120 (121)
72 3ngh_A PDZ domain-containing p 99.1 8.5E-11 2.9E-15 73.2 4.2 52 8-65 34-85 (106)
73 2koj_A Partitioning defective 99.1 2.5E-10 8.5E-15 71.5 6.4 53 8-65 47-101 (111)
74 1i16_A Interleukin 16, LCF; cy 99.1 1.7E-10 5.9E-15 74.7 5.7 53 8-65 65-118 (130)
75 2djt_A Unnamed protein product 99.1 1.4E-10 4.7E-15 71.9 5.0 52 8-65 46-98 (104)
76 2w4f_A Protein LAP4; structura 99.1 1.7E-10 5.7E-15 70.6 5.2 52 8-65 42-93 (97)
77 2ego_A General receptor for ph 99.1 3E-10 1E-14 69.7 6.3 51 8-64 45-95 (96)
78 2fe5_A Presynaptic protein SAP 99.1 2.9E-10 9.9E-15 69.1 6.1 52 8-65 41-93 (94)
79 2kjd_A Sodium/hydrogen exchang 99.1 1.1E-11 3.6E-16 79.7 -0.5 63 8-76 41-105 (128)
80 3cbz_A Dishevelled-2; PDZ doma 99.1 1.8E-10 6.1E-15 72.4 5.2 53 8-65 41-96 (108)
81 3qik_A Phosphatidylinositol 3, 99.1 1.2E-10 4E-15 73.7 4.3 50 8-62 47-98 (101)
82 1wi4_A Synip, syntaxin binding 99.1 1.7E-10 5.7E-15 72.8 5.0 53 8-65 49-105 (109)
83 1vae_A Rhophilin 2, rhophilin, 99.1 1.7E-10 6E-15 73.2 5.0 52 8-64 44-95 (111)
84 2r4h_A Membrane-associated gua 99.1 2.7E-10 9.2E-15 71.9 5.8 52 8-65 57-109 (112)
85 3num_A Serine protease HTRA1; 99.1 1.6E-11 5.4E-16 90.2 0.0 60 8-77 262-321 (332)
86 1v5q_A GRIP1 homolog, glutamat 99.1 1.4E-10 4.7E-15 74.3 4.4 53 8-65 53-107 (122)
87 3pv2_A DEGQ; trypsin fold, PDZ 99.1 4.8E-10 1.6E-14 85.8 8.2 61 8-76 290-351 (451)
88 1ujd_A KIAA0559 protein; PDZ d 99.1 1.5E-10 5.3E-15 73.6 4.4 52 8-65 57-109 (117)
89 2dlu_A INAD-like protein; PDZ 99.0 1.5E-10 5E-15 72.7 4.2 54 8-68 46-100 (111)
90 2fne_A Multiple PDZ domain pro 99.0 4.5E-10 1.6E-14 71.7 6.6 54 8-68 61-115 (117)
91 1wif_A RSGI RUH-020, riken cDN 99.0 3.8E-10 1.3E-14 73.5 6.3 53 8-65 57-111 (126)
92 2edp_A Fragment, shroom family 99.0 2.5E-10 8.5E-15 70.7 5.2 51 8-65 43-94 (100)
93 2kpk_A Membrane-associated gua 99.0 3.9E-10 1.3E-14 72.9 6.3 53 8-65 51-105 (129)
94 2d92_A INAD-like protein; PDZ 99.0 3.1E-10 1.1E-14 71.1 5.6 53 8-65 52-105 (108)
95 1wfg_A Regulating synaptic mem 99.0 3.7E-10 1.3E-14 73.4 6.0 53 8-65 73-127 (131)
96 1ueq_A Membrane associated gua 99.0 5.1E-10 1.7E-14 71.7 6.6 53 8-65 52-106 (123)
97 1g9o_A NHE-RF; PDZ domain, com 99.0 3.8E-10 1.3E-14 68.3 5.7 53 8-65 35-87 (91)
98 3tsv_A Tight junction protein 99.0 2.1E-10 7.1E-15 74.0 4.7 53 8-65 59-112 (124)
99 2yt7_A Amyloid beta A4 precurs 99.0 5.2E-10 1.8E-14 69.3 6.3 52 8-64 45-98 (101)
100 1y7n_A Amyloid beta A4 precurs 99.0 5E-10 1.7E-14 68.6 6.0 51 8-64 39-89 (90)
101 2iwn_A Multiple PDZ domain pro 99.0 3.8E-10 1.3E-14 68.7 5.4 52 8-65 41-93 (97)
102 4a8c_A Periplasmic PH-dependen 99.0 1E-09 3.4E-14 83.6 8.8 62 8-77 271-333 (436)
103 1x5n_A Harmonin; PDZ domain, u 99.0 8E-11 2.7E-15 74.2 2.3 62 8-77 49-111 (114)
104 1wfv_A Membrane associated gua 99.0 2.1E-10 7.1E-15 70.8 4.2 52 8-65 44-96 (103)
105 2jik_A Synaptojanin-2 binding 99.0 4.8E-10 1.6E-14 69.1 5.8 52 8-65 45-97 (101)
106 2fcf_A Multiple PDZ domain pro 99.0 4.4E-10 1.5E-14 69.4 5.6 52 8-65 47-99 (103)
107 2ejy_A 55 kDa erythrocyte memb 99.0 3.8E-10 1.3E-14 70.3 5.2 52 8-65 44-96 (97)
108 1wha_A KIAA0147 protein, scrib 99.0 6.2E-10 2.1E-14 69.2 6.1 52 8-65 46-98 (105)
109 2i1n_A Discs, large homolog 3; 99.0 5.4E-10 1.8E-14 69.0 5.8 54 8-68 42-96 (102)
110 2vwr_A Ligand of NUMB protein 99.0 5.5E-10 1.9E-14 68.2 5.7 52 8-65 37-89 (95)
111 1m5z_A GRIP, AMPA receptor int 99.0 6.9E-10 2.4E-14 67.1 6.1 51 8-64 40-90 (91)
112 2dm8_A INAD-like protein; PDZ 99.0 6E-10 2.1E-14 70.2 6.0 54 8-68 51-105 (116)
113 1ujv_A Membrane associated gua 99.0 1E-09 3.6E-14 67.6 6.9 46 19-65 45-91 (96)
114 1p1d_A PDZ45, glutamate recept 99.0 7.7E-10 2.6E-14 75.5 6.6 53 8-65 44-98 (196)
115 3axa_A Afadin, nectin-3, prote 99.0 7.5E-10 2.5E-14 68.9 6.0 52 8-65 46-98 (106)
116 1wi2_A Riken cDNA 2700099C19; 99.0 5.6E-10 1.9E-14 69.4 5.4 51 8-65 49-99 (104)
117 2edv_A FERM and PDZ domain-con 99.0 1.2E-09 4.1E-14 67.2 6.8 51 8-65 39-89 (96)
118 2q9v_A Membrane-associated gua 99.0 3.2E-10 1.1E-14 68.5 4.1 53 8-65 35-89 (90)
119 3qe1_A Sorting nexin-27, G pro 99.0 7.6E-10 2.6E-14 68.9 5.9 52 8-65 51-102 (107)
120 1qav_A Alpha-1 syntrophin (res 99.0 8.3E-10 2.9E-14 66.7 5.7 51 8-64 38-89 (90)
121 3r0h_A INAD, inactivation-NO-a 99.0 1.1E-09 3.9E-14 74.6 7.0 54 8-65 53-108 (206)
122 1q7x_A PDZ2B domain of PTP-BAS 99.0 6.5E-10 2.2E-14 69.4 5.3 52 8-65 50-102 (108)
123 2qg1_A Multiple PDZ domain pro 99.0 1E-09 3.4E-14 66.5 6.0 52 8-65 37-89 (92)
124 2byg_A Channel associated prot 99.0 5.3E-10 1.8E-14 71.3 5.0 52 8-65 62-114 (117)
125 1r6j_A Syntenin 1; PDZ, membra 99.0 6.1E-10 2.1E-14 67.7 5.0 50 8-63 31-80 (82)
126 4fgm_A Aminopeptidase N family 99.0 1.3E-09 4.3E-14 86.2 8.1 61 8-77 504-565 (597)
127 2cs5_A Tyrosine-protein phosph 99.0 6.1E-10 2.1E-14 70.7 5.1 53 8-65 49-106 (119)
128 3o46_A Maguk P55 subfamily mem 99.0 8.7E-10 3E-14 67.1 5.5 52 8-65 36-88 (93)
129 1x6d_A Interleukin-16; PDZ dom 99.0 1.9E-10 6.6E-15 73.0 2.2 57 8-70 50-107 (119)
130 2qbw_A PDZ-fibronectin fusion 99.0 5.4E-09 1.9E-13 70.8 9.4 61 8-76 32-95 (195)
131 1wg6_A Hypothetical protein (r 99.0 7.8E-10 2.7E-14 71.4 4.8 53 8-65 63-122 (127)
132 1v62_A KIAA1719 protein; struc 98.9 7.7E-10 2.6E-14 70.4 4.7 52 8-65 50-102 (117)
133 3hpk_A Protein interacting wit 98.9 1.4E-09 4.9E-14 69.6 5.8 52 8-65 53-105 (125)
134 2dkr_A LIN-7 homolog B; LIN-7B 98.9 1.1E-09 3.7E-14 66.4 5.0 52 8-65 38-90 (93)
135 1fc6_A Photosystem II D1 prote 98.9 2.5E-09 8.5E-14 80.1 8.0 63 8-76 107-172 (388)
136 3r68_A Na(+)/H(+) exchange reg 98.9 9E-10 3.1E-14 67.0 4.6 52 8-65 37-88 (95)
137 2db5_A INAD-like protein; PDZ 98.9 1.4E-09 4.9E-14 69.8 5.8 53 8-65 62-115 (128)
138 2dmz_A INAD-like protein; PDZ 98.9 8E-10 2.7E-14 71.0 4.6 56 8-70 54-110 (129)
139 1ufx_A KIAA1526 protein; PDZ d 98.9 4.3E-10 1.5E-14 70.3 3.2 53 8-65 40-97 (103)
140 1mfg_A ERB-B2 interacting prot 98.9 2.7E-09 9.1E-14 65.1 6.6 51 8-65 43-93 (95)
141 2iwq_A Multiple PDZ domain pro 98.9 1.4E-09 4.7E-14 70.0 5.5 52 8-65 67-119 (123)
142 1uit_A Human discs large 5 pro 98.9 4E-10 1.4E-14 71.4 2.9 57 8-72 50-107 (117)
143 1v6b_A Harmonin isoform A1; st 98.9 1.1E-09 3.8E-14 69.8 5.0 53 8-65 51-107 (118)
144 3nfk_A Tyrosine-protein phosph 98.9 1.3E-09 4.4E-14 67.8 5.1 52 8-64 51-107 (107)
145 1va8_A Maguk P55 subfamily mem 98.9 1.4E-09 4.8E-14 68.7 5.4 52 8-65 56-108 (113)
146 1wf8_A Neurabin-I; PDZ domain, 98.9 1.5E-09 5.1E-14 67.7 5.3 52 8-65 48-100 (107)
147 3gsl_A Disks large homolog 4; 98.9 1.3E-09 4.3E-14 73.3 5.3 56 8-70 138-194 (196)
148 3k1r_A Harmonin; protein-prote 98.9 1.7E-09 5.9E-14 73.9 6.0 51 8-65 118-168 (192)
149 1uhp_A Hypothetical protein KI 98.9 2.5E-09 8.7E-14 66.6 6.2 52 8-65 49-101 (107)
150 2yuy_A RHO GTPase activating p 98.9 4.7E-10 1.6E-14 72.1 2.8 52 8-65 69-120 (126)
151 1q3o_A Shank1; PDZ, GKAP, pept 98.9 1.8E-09 6E-14 67.6 5.4 52 8-65 53-104 (109)
152 3l4f_D SH3 and multiple ankyri 98.9 3.5E-09 1.2E-13 68.8 7.0 52 8-65 73-124 (132)
153 2d8i_A T-cell lymphoma invasio 98.9 1.3E-09 4.4E-14 69.6 4.8 50 8-65 52-101 (114)
154 3kzd_A TIAM-1, T-lymphoma inva 98.9 2.1E-09 7.1E-14 66.9 5.5 48 8-63 43-90 (94)
155 1n7t_A 99-MER peptide of densi 98.9 3.9E-09 1.3E-13 65.3 6.8 51 8-65 51-101 (103)
156 1nf3_C PAR-6B; semi-CRIB motif 98.9 2.3E-09 7.8E-14 69.1 5.9 52 8-65 73-125 (128)
157 4e34_A Golgi-associated PDZ an 98.9 1.8E-09 6.2E-14 64.7 5.1 50 8-63 36-86 (87)
158 2eno_A Synaptojanin-2-binding 98.9 1.8E-09 6E-14 68.7 5.0 52 8-65 55-107 (120)
159 2dc2_A GOPC, golgi associated 98.9 3E-09 1E-13 66.2 5.8 52 8-65 43-95 (103)
160 3pv2_A DEGQ; trypsin fold, PDZ 98.9 2.7E-09 9.2E-14 81.7 6.8 57 8-73 394-450 (451)
161 3i4w_A Disks large homolog 4; 98.9 2.8E-09 9.7E-14 65.7 5.6 52 8-65 43-95 (104)
162 2e7k_A Maguk P55 subfamily mem 98.9 1.8E-09 6.1E-14 65.9 4.6 51 8-65 37-88 (91)
163 2daz_A INAD-like protein; PDZ 98.9 2.3E-09 8E-14 68.6 5.3 61 8-75 59-121 (124)
164 1uez_A KIAA1526 protein; PDZ d 98.9 4.5E-10 1.5E-14 69.4 1.8 51 8-65 43-93 (101)
165 2qt5_A Glutamate receptor-inte 98.9 2E-09 6.8E-14 73.4 5.0 55 8-69 143-198 (200)
166 1ky9_A Protease DO, DEGP, HTRA 98.9 8.4E-10 2.9E-14 84.4 3.5 61 8-76 294-355 (448)
167 3b76_A E3 ubiquitin-protein li 98.9 3E-09 1E-13 68.1 5.5 52 8-65 61-113 (118)
168 2ehr_A INAD-like protein; PDZ 98.9 4.1E-09 1.4E-13 66.6 6.1 52 8-65 58-110 (117)
169 2eei_A PDZ domain-containing p 98.9 1.7E-09 5.9E-14 67.1 4.1 52 8-65 40-91 (106)
170 3e17_A Tight junction protein 98.9 3.4E-09 1.2E-13 64.2 5.3 52 8-65 29-81 (88)
171 2qkv_A Inactivation-NO-after-p 98.9 4.5E-09 1.5E-13 64.5 5.9 52 8-65 39-91 (96)
172 3soe_A Membrane-associated gua 98.9 7.3E-09 2.5E-13 66.4 7.1 53 12-70 44-97 (113)
173 2h2b_A Tight junction protein 98.9 8.6E-09 2.9E-13 64.0 7.0 51 8-65 47-97 (107)
174 3egg_C Spinophilin; PP1, serin 98.8 5E-09 1.7E-13 71.1 6.1 51 8-64 119-170 (170)
175 2gzv_A PRKCA-binding protein; 98.8 4.1E-09 1.4E-13 66.9 5.4 51 8-64 58-109 (114)
176 2la8_A Inactivation-NO-after-p 98.8 6.8E-09 2.3E-13 65.2 6.1 52 8-65 33-85 (106)
177 2qt5_A Glutamate receptor-inte 98.8 7.6E-09 2.6E-13 70.5 6.8 52 8-65 41-93 (200)
178 3gsl_A Disks large homolog 4; 98.8 4.7E-09 1.6E-13 70.4 5.5 52 8-65 43-95 (196)
179 1p1d_A PDZ45, glutamate recept 98.8 4.9E-09 1.7E-13 71.4 5.6 52 8-65 143-195 (196)
180 1uju_A Scribble; PDZ domain, c 98.8 8.1E-10 2.8E-14 69.3 1.2 52 8-65 52-104 (111)
181 1um7_A Synapse-associated prot 98.8 1.3E-08 4.4E-13 63.6 5.8 52 8-65 47-99 (113)
182 3tsz_A Tight junction protein 98.8 8.3E-09 2.8E-13 77.9 5.4 53 8-65 39-92 (391)
183 2z17_A Pleckstrin homology SEC 98.8 4.2E-09 1.4E-13 65.3 3.1 48 8-61 56-103 (104)
184 2csj_A TJP2 protein; PDZ domai 98.7 1.1E-08 3.8E-13 64.7 4.9 51 8-65 54-104 (117)
185 3suz_A Amyloid beta A4 precurs 98.7 6.5E-09 2.2E-13 78.2 3.5 74 8-89 240-315 (388)
186 1tp5_A Presynaptic density pro 98.7 2.6E-08 9E-13 62.9 5.2 52 8-65 46-98 (119)
187 3r0h_A INAD, inactivation-NO-a 98.7 3.5E-08 1.2E-12 67.2 6.0 52 8-65 144-196 (206)
188 2krg_A Na(+)/H(+) exchange reg 98.7 4.4E-10 1.5E-14 79.0 -3.8 62 8-76 41-105 (216)
189 3k50_A Putative S41 protease; 98.6 1.2E-08 4.2E-13 77.4 2.3 49 8-65 98-146 (403)
190 1ky9_A Protease DO, DEGP, HTRA 98.6 5.1E-09 1.7E-13 80.1 0.0 57 8-73 391-447 (448)
191 1z87_A Alpha-1-syntrophin; pro 98.6 4E-08 1.4E-12 71.0 4.7 52 8-65 111-163 (263)
192 2lob_A Golgi-associated PDZ an 98.0 5.5E-09 1.9E-13 66.2 0.0 49 8-62 61-110 (112)
193 1k32_A Tricorn protease; prote 98.6 9E-08 3.1E-12 77.8 6.6 61 8-76 764-826 (1045)
194 3shw_A Tight junction protein 98.6 6.6E-08 2.3E-12 74.7 5.3 53 8-65 31-84 (468)
195 4fln_A Protease DO-like 2, chl 98.4 1.2E-06 4.1E-11 68.7 8.7 63 8-76 285-355 (539)
196 1w9e_A Syntenin 1; cell adhesi 98.4 1.9E-08 6.6E-13 66.9 -1.5 50 8-75 115-164 (166)
197 2xkx_A Disks large homolog 4; 98.2 2.1E-06 7.3E-11 68.8 6.8 54 8-68 192-246 (721)
198 2xkx_A Disks large homolog 4; 98.1 3.6E-06 1.2E-10 67.5 6.4 52 8-65 339-391 (721)
199 3gge_A PDZ domain-containing p 98.1 9.1E-06 3.1E-10 50.5 6.3 53 8-65 36-90 (95)
200 3suz_A Amyloid beta A4 precurs 97.9 1.6E-06 5.6E-11 65.0 0.0 52 8-65 323-374 (388)
201 4fln_A Protease DO-like 2, chl 97.2 0.00061 2.1E-08 53.5 5.9 47 9-62 424-470 (539)
202 2pjh_A Protein NPL4, nuclear p 50.3 9.3 0.00032 22.0 2.0 22 4-29 55-76 (80)
203 2fei_A CD2-associated protein; 42.7 26 0.0009 18.9 3.0 25 4-32 6-30 (65)
204 1jo8_A ABP1P, actin binding pr 41.6 22 0.00076 18.4 2.5 25 4-32 5-29 (58)
205 2a28_A BZZ1 protein; SH3 domai 38.6 31 0.0011 17.4 2.8 25 4-32 5-29 (54)
206 1yn8_A NBP2, NAP1-binding prot 38.5 26 0.00089 18.0 2.5 25 4-32 6-30 (59)
207 1uti_A GRB2-related adaptor pr 37.8 28 0.00094 17.9 2.5 25 4-32 6-30 (58)
208 2fpe_A C-JUN-amino-terminal ki 37.8 26 0.00089 18.3 2.5 24 4-31 8-31 (62)
209 1cka_A C-CRK N-terminal SH3 do 37.4 28 0.00095 17.8 2.5 25 4-32 6-30 (57)
210 3dor_A Protein CT_858, CPAF; m 37.3 20 0.00068 28.4 2.5 18 19-36 107-124 (583)
211 2x3w_D Syndapin I, protein kin 37.3 28 0.00095 18.0 2.5 25 4-32 8-32 (60)
212 1k4u_S Phagocyte NADPH oxidase 37.0 35 0.0012 17.8 2.9 25 4-32 10-34 (62)
213 1y0m_A 1-phosphatidylinositol- 37.0 29 0.00098 18.1 2.5 25 4-32 8-32 (61)
214 1g2b_A Spectrin alpha chain; c 36.2 29 0.00098 18.2 2.5 25 4-32 26-50 (62)
215 2oaw_A Spectrin alpha chain, b 36.0 29 0.00098 18.2 2.5 25 4-32 6-30 (65)
216 2bz8_A SH3-domain kinase bindi 36.0 31 0.001 17.8 2.5 25 4-32 6-30 (58)
217 1zuy_A Myosin-5 isoform; SH3 d 35.9 30 0.001 17.7 2.5 25 4-32 5-30 (58)
218 2ydl_A SH3 domain-containing k 35.1 31 0.0011 18.8 2.5 25 4-32 7-31 (69)
219 1oot_A Hypothetical 40.4 kDa p 34.9 33 0.0011 17.7 2.5 25 4-32 8-32 (60)
220 2jte_A CD2-associated protein; 34.8 32 0.0011 18.0 2.5 25 4-32 11-35 (64)
221 1zx6_A YPR154WP; SH3 domain, p 34.6 33 0.0011 17.6 2.5 25 4-32 7-31 (58)
222 1sem_A SEM-5; SRC-homology 3 ( 34.6 33 0.0011 17.6 2.5 25 4-32 7-31 (58)
223 2j3t_D Trafficking protein par 33.8 38 0.0013 23.4 3.3 46 19-64 54-101 (219)
224 1tg0_A BBC1 protein, myosin ta 33.6 33 0.0011 18.3 2.5 24 5-32 13-36 (68)
225 1uj0_A Signal transducing adap 33.2 36 0.0012 17.8 2.5 25 4-32 10-34 (62)
226 2iim_A Proto-oncogene tyrosine 33.2 36 0.0012 17.8 2.5 25 4-32 11-35 (62)
227 2lx7_A GAS-7, growth arrest-sp 33.0 36 0.0012 18.3 2.5 26 4-32 8-33 (60)
228 1w1f_A Tyrosine-protein kinase 33.0 35 0.0012 17.9 2.5 25 4-32 12-36 (65)
229 2g6f_X RHO guanine nucleotide 33.0 36 0.0012 17.6 2.5 25 4-32 9-33 (59)
230 2dl4_A Protein STAC; SH3 domai 32.9 37 0.0013 18.2 2.6 25 4-32 12-36 (68)
231 1zlm_A Osteoclast stimulating 32.9 36 0.0012 17.5 2.5 25 4-32 8-32 (58)
232 2gnc_A SLIT-ROBO RHO GTPase-ac 32.9 36 0.0012 17.7 2.5 25 4-32 11-35 (60)
233 4e6r_A Cytoplasmic protein NCK 32.5 48 0.0017 16.8 3.0 25 4-32 6-30 (58)
234 1wyx_A CRK-associated substrat 32.5 35 0.0012 18.2 2.5 25 4-32 8-32 (69)
235 1wxb_A Epidermal growth factor 32.4 44 0.0015 17.8 2.9 25 4-32 12-36 (68)
236 2v1q_A SLA1, cytoskeleton asse 32.4 38 0.0013 17.4 2.5 25 4-32 7-31 (60)
237 1i07_A Epidermal growth factor 32.3 37 0.0013 17.6 2.5 25 4-32 6-30 (60)
238 2nwm_A Vinexin; cell adhesion; 32.3 37 0.0013 18.2 2.5 25 4-32 6-30 (65)
239 1csk_A C-SRC SH3 domain; phosp 32.0 36 0.0012 18.3 2.5 25 4-32 16-40 (71)
240 2vwf_A Growth factor receptor- 31.9 39 0.0013 17.2 2.5 25 4-32 7-31 (58)
241 3u23_A CD2-associated protein; 31.8 37 0.0013 17.6 2.5 25 4-32 12-36 (65)
242 2jw4_A Cytoplasmic protein NCK 31.8 46 0.0016 18.0 2.9 25 4-32 12-36 (72)
243 2j6f_A CD2-associated protein; 31.3 38 0.0013 17.7 2.5 25 4-32 6-30 (62)
244 1w70_A Neutrophil cytosol fact 31.3 39 0.0013 17.5 2.5 25 4-32 9-33 (60)
245 2djq_A SH3 domain containing r 31.3 38 0.0013 18.0 2.5 25 4-32 12-36 (68)
246 1aww_A ATK, AMGX1, BPK, bruton 31.1 47 0.0016 17.5 2.9 25 4-32 13-37 (67)
247 2fpf_A C-JUN-amino-terminal ki 31.0 38 0.0013 18.2 2.5 24 4-31 11-34 (71)
248 2dmo_A Neutrophil cytosol fact 31.0 40 0.0014 18.0 2.6 25 4-32 12-36 (68)
249 2xmf_A Myosin 1E SH3; motor pr 31.0 40 0.0014 17.4 2.5 24 5-32 11-34 (60)
250 3eg3_A Proto-oncogene tyrosine 30.6 55 0.0019 16.8 3.0 25 4-32 10-34 (63)
251 2ew3_A SH3-containing GRB2-lik 30.5 41 0.0014 18.2 2.5 25 4-32 8-32 (68)
252 2ed1_A 130 kDa phosphatidylino 30.5 42 0.0015 18.3 2.6 25 4-32 15-39 (76)
253 1gl5_A Tyrosine-protein kinase 30.4 41 0.0014 17.9 2.5 25 4-32 7-31 (67)
254 2o9s_A Ponsin; SH3 domain, sig 30.4 40 0.0014 17.8 2.5 25 4-32 11-35 (67)
255 1uhf_A Intersectin 2; beta bar 30.4 50 0.0017 17.7 2.9 24 4-31 13-36 (69)
256 2lcs_A NAP1-binding protein 2; 30.4 40 0.0014 18.5 2.5 25 4-32 10-34 (73)
257 2j05_A RAS GTPase-activating p 30.2 42 0.0014 17.7 2.5 25 4-32 10-35 (65)
258 1zuu_A BZZ1 protein; SH3 domai 30.2 32 0.0011 17.6 1.9 25 4-32 6-30 (58)
259 2kxc_A Brain-specific angiogen 30.0 41 0.0014 17.8 2.5 25 4-32 11-36 (67)
260 2b86_A Cytoplasmic protein NCK 29.9 40 0.0014 18.3 2.4 25 4-32 9-33 (67)
261 4f14_A Nebulette; SH3 domain, 29.7 57 0.0019 16.8 3.0 25 4-32 11-35 (64)
262 1x2k_A OSTF1, osteoclast stimu 29.7 46 0.0016 17.7 2.7 25 4-32 12-36 (68)
263 2cuc_A SH3 domain containing r 29.6 52 0.0018 17.4 2.9 25 4-32 12-36 (70)
264 2lj0_A Sorbin and SH3 domain-c 29.5 43 0.0015 18.2 2.5 25 4-32 11-35 (65)
265 3cqt_A P59-FYN, proto-oncogene 29.3 43 0.0015 18.7 2.5 25 4-32 10-34 (79)
266 2drm_A Acanthamoeba myosin IB; 29.0 47 0.0016 16.9 2.5 25 4-32 8-32 (58)
267 1spk_A RSGI RUH-010, riken cDN 29.0 52 0.0018 17.6 2.8 25 4-32 12-37 (72)
268 3c0c_A Endophilin-A2; endocyto 28.9 44 0.0015 18.1 2.5 25 4-32 18-42 (73)
269 2l0a_A STAM-1, signal transduc 28.9 44 0.0015 18.4 2.5 25 4-32 22-46 (72)
270 2dl3_A Sorbin and SH3 domain-c 28.8 45 0.0015 17.7 2.5 25 4-32 12-36 (68)
271 1b07_A Protein (proto-oncogene 28.7 45 0.0015 17.8 2.5 25 4-32 8-32 (65)
272 2dlp_A KIAA1783 protein; SH3 d 28.7 44 0.0015 18.7 2.5 25 4-32 13-37 (85)
273 2k9g_A SH3 domain-containing k 28.5 44 0.0015 18.0 2.5 25 4-32 14-38 (73)
274 1x2p_A Protein arginine N-meth 28.4 49 0.0017 17.5 2.6 25 4-32 12-36 (68)
275 2ak5_A RHO guanine nucleotide 28.4 48 0.0016 17.3 2.5 25 4-32 11-35 (64)
276 2dil_A Proline-serine-threonin 28.2 55 0.0019 17.4 2.8 25 4-32 13-37 (69)
277 2d8j_A FYN-related kinase; SH3 28.2 34 0.0012 18.6 1.9 25 4-32 12-36 (77)
278 2jt4_A Cytoskeleton assembly c 28.1 46 0.0016 17.7 2.5 25 4-32 11-35 (71)
279 2dnu_A RUH-061, SH3 multiple d 28.1 57 0.0019 17.4 2.9 25 4-32 13-37 (71)
280 1uhc_A KIAA1010 protein; beta 28.0 48 0.0016 18.2 2.6 25 4-32 18-42 (79)
281 1gbq_A GRB2; complex (signal t 28.0 46 0.0016 18.1 2.5 25 4-32 14-38 (74)
282 2ebp_A SAM and SH3 domain-cont 27.7 48 0.0016 18.1 2.5 25 4-32 14-40 (73)
283 2dl7_A KIAA0769 protein; SH3 d 27.6 48 0.0016 17.9 2.5 25 4-32 13-37 (73)
284 1gyt_A Cytosol aminopeptidase; 27.4 17 0.00058 28.2 0.6 24 8-36 323-346 (503)
285 2bzy_A CRK-like protein, CRKL 27.3 37 0.0013 18.1 1.9 25 4-32 6-32 (67)
286 1ugv_A KIAA0621, olygophrenin- 27.2 45 0.0015 18.0 2.3 25 4-32 15-39 (72)
287 3ulr_B SRC substrate cortactin 27.2 65 0.0022 16.7 3.0 24 5-32 15-38 (65)
288 2enm_A Sorting nexin-9; SH3-li 27.2 53 0.0018 17.9 2.7 25 4-32 14-39 (77)
289 2dl8_A SLIT-ROBO RHO GTPase-ac 27.2 50 0.0017 17.8 2.5 25 4-32 14-38 (72)
290 4esr_A Jouberin; AHI-1, AHI1, 27.1 66 0.0022 17.0 3.0 25 4-32 11-35 (69)
291 2rf0_A Mitogen-activated prote 27.0 47 0.0016 19.1 2.5 24 5-32 35-58 (89)
292 3rnj_A Brain-specific angiogen 26.9 50 0.0017 17.4 2.5 13 20-32 25-37 (67)
293 1wxt_A Hypothetical protein FL 26.8 53 0.0018 17.5 2.6 25 4-32 12-36 (68)
294 2jvf_A De novo protein M7; tet 26.8 99 0.0034 18.0 4.3 21 55-76 6-26 (96)
295 3lnn_A Membrane fusion protein 26.7 27 0.00094 24.6 1.6 16 16-31 328-343 (359)
296 2yup_A Vinexin; sorbin and SH3 26.7 53 0.0018 18.6 2.7 25 4-32 22-46 (90)
297 2l66_A SSO7C4, transcriptional 26.7 22 0.00076 18.6 0.9 12 19-30 23-34 (53)
298 2eyx_A V-CRK sarcoma virus CT1 26.6 40 0.0014 18.0 2.0 13 19-31 24-36 (67)
299 2eqi_A Phospholipase C, gamma 26.4 53 0.0018 17.4 2.5 25 4-32 12-36 (69)
300 2ct4_A CDC42-interacting prote 26.2 52 0.0018 17.5 2.5 25 4-32 12-36 (70)
301 2kgt_A Tyrosine-protein kinase 26.1 40 0.0014 18.1 2.0 23 4-30 15-37 (72)
302 2dm1_A Protein VAV-2; RHO fami 26.1 54 0.0018 17.7 2.5 25 4-32 12-36 (73)
303 1ue9_A Intersectin 2; beta bar 26.1 56 0.0019 17.9 2.6 25 4-32 12-36 (80)
304 3i5r_A Phosphatidylinositol 3- 26.1 52 0.0018 18.3 2.5 24 4-31 10-33 (83)
305 2ed0_A ABL interactor 2; coile 26.1 51 0.0018 18.1 2.5 24 5-32 23-46 (78)
306 2ke9_A Caskin-2; SH3 domain, A 26.0 51 0.0017 18.6 2.5 25 4-32 23-48 (83)
307 2k2m_A EPS8-like protein 1; al 25.9 56 0.0019 17.4 2.6 25 4-32 13-37 (68)
308 1wi7_A SH3-domain kinase bindi 25.9 48 0.0016 17.6 2.3 25 4-32 12-36 (68)
309 2dbm_A SH3-containing GRB2-lik 25.8 53 0.0018 17.7 2.5 25 4-32 12-36 (73)
310 2cre_A HEF-like protein; SH3 d 25.8 43 0.0015 17.8 2.1 25 4-32 12-36 (71)
311 1u5s_A Cytoplasmic protein NCK 25.8 44 0.0015 17.8 2.1 25 4-32 11-35 (71)
312 1j3t_A Intersectin 2; beta bar 25.6 56 0.0019 17.7 2.5 25 4-32 15-39 (74)
313 1x2q_A Signal transducing adap 25.6 56 0.0019 18.4 2.6 25 4-32 22-46 (88)
314 3ngp_A Spectrin alpha chain, b 25.6 74 0.0025 16.2 3.0 25 4-32 11-35 (62)
315 2da9_A SH3-domain kinase bindi 25.5 45 0.0015 17.8 2.1 25 4-32 12-36 (70)
316 2pqh_A Spectrin alpha chain, b 25.4 55 0.0019 18.1 2.5 25 4-32 7-31 (80)
317 1ujy_A RHO guanine nucleotide 25.3 47 0.0016 18.1 2.2 25 4-32 15-39 (76)
318 2i0n_A Class VII unconventiona 25.1 42 0.0014 18.6 2.0 25 4-32 15-39 (80)
319 1neg_A Spectrin alpha chain, b 24.9 55 0.0019 18.5 2.5 25 4-32 22-46 (83)
320 3thk_A Spectrin alpha chain, b 24.8 75 0.0026 16.9 3.0 25 4-32 10-34 (73)
321 2e5k_A Suppressor of T-cell re 24.4 56 0.0019 18.6 2.5 25 4-32 21-45 (94)
322 1i1j_A Melanoma derived growth 24.2 55 0.0019 19.7 2.5 25 4-32 27-51 (108)
323 3jru_B Probable cytosol aminop 24.0 21 0.00073 27.7 0.6 24 8-36 315-338 (490)
324 2kxd_A 11-MER peptide, SH3 dom 24.0 68 0.0023 17.3 2.7 25 3-32 4-28 (73)
325 2yuo_A CIP85, RUN and TBC1 dom 23.9 60 0.0021 17.7 2.5 25 4-32 12-36 (78)
326 1x43_A Endophilin B1, SH3 doma 23.9 88 0.003 17.2 3.2 25 4-32 22-46 (81)
327 2cud_A SRC-like-adapter; SH3 d 23.9 63 0.0021 17.8 2.6 12 20-31 34-45 (79)
328 1x6b_A RHO guanine exchange fa 23.9 52 0.0018 18.1 2.2 13 19-31 33-45 (79)
329 2o2o_A SH3-domain kinase-bindi 23.8 58 0.002 18.8 2.5 25 4-32 23-47 (92)
330 1x69_A Cortactin isoform A; SH 23.8 66 0.0023 17.6 2.7 24 5-32 23-46 (79)
331 1x6g_A Megakaryocyte-associate 23.7 56 0.0019 18.1 2.4 14 19-32 33-46 (81)
332 2ega_A SH3 and PX domain-conta 23.7 46 0.0016 17.8 1.9 25 4-32 13-37 (70)
333 3ij3_A Cytosol aminopeptidase; 23.7 22 0.00074 27.6 0.6 24 8-36 303-326 (482)
334 1yfb_A Transition state regula 23.5 27 0.00093 19.0 0.9 11 19-29 33-43 (59)
335 3h0h_A Proto-oncogene tyrosine 23.3 82 0.0028 16.7 3.0 24 5-32 21-44 (73)
336 1ruw_A Myosin-3 isoform, MYO3; 23.3 64 0.0022 17.1 2.5 25 4-32 7-32 (69)
337 4glm_A Dynamin-binding protein 23.2 85 0.0029 16.5 3.0 24 5-32 19-42 (72)
338 1lam_A Leucine aminopeptidase; 23.0 18 0.00063 27.9 0.1 24 8-36 303-326 (484)
339 3kzw_A Cytosol aminopeptidase; 23.0 23 0.00078 27.7 0.6 24 8-36 336-359 (515)
340 1s1n_A Nephrocystin 1; beta ba 23.0 49 0.0017 17.5 1.9 25 4-32 15-39 (68)
341 2ysq_A RHO guanine nucleotide 22.9 67 0.0023 17.7 2.6 25 4-32 15-39 (81)
342 1uff_A Intersectin 2; beta bar 22.8 64 0.0022 18.4 2.5 25 4-32 10-34 (93)
343 2oi3_A Tyrosine-protein kinase 22.6 68 0.0023 17.8 2.6 13 19-31 41-53 (86)
344 4ag1_C Fynomer; hydrolase-de n 22.4 81 0.0028 17.7 2.9 25 4-32 11-35 (84)
345 1z9q_A Neutrophil cytosol fact 22.3 36 0.0012 19.2 1.3 25 4-32 23-47 (79)
346 2ct3_A Vinexin; SH3 domian, st 22.3 53 0.0018 17.4 2.0 24 5-32 13-36 (70)
347 3o5z_A Phosphatidylinositol 3- 22.3 67 0.0023 18.3 2.5 24 4-31 16-39 (90)
348 3kr4_A M17 leucyl aminopeptida 22.2 24 0.00083 27.7 0.6 24 8-36 347-370 (528)
349 3pei_A Cytosol aminopeptidase; 22.1 20 0.00068 27.8 0.1 24 8-36 304-327 (486)
350 2qcp_X Cation efflux system pr 21.7 40 0.0014 19.3 1.4 11 19-29 51-61 (80)
351 2egc_A SH3 and PX domain-conta 21.7 66 0.0023 17.5 2.4 24 4-32 15-38 (75)
352 3reb_B Tyrosine-protein kinase 21.6 88 0.003 17.5 3.0 25 4-32 8-32 (90)
353 2hc9_A Leucine aminopeptidase 21.5 26 0.00087 27.2 0.6 24 8-36 305-328 (491)
354 3ne5_B Cation efflux system pr 21.3 37 0.0013 24.9 1.5 16 18-33 367-382 (413)
355 2d8h_A SH3YL1 protein; SH3 dom 21.3 44 0.0015 18.4 1.5 14 19-32 33-46 (80)
356 3h8g_F Cytosol aminopeptidase; 21.2 21 0.00072 27.7 0.1 24 8-36 320-343 (497)
357 2yun_A Nostrin; nitric oxide s 21.1 74 0.0025 17.4 2.5 25 4-32 12-36 (79)
358 2ege_A Uncharacterized protein 20.9 1E+02 0.0035 16.7 3.0 14 19-32 30-43 (75)
359 1wx6_A Cytoplasmic protein NCK 20.8 80 0.0027 17.7 2.7 24 5-32 23-46 (91)
360 1awj_A ITK; transferase, regul 20.7 51 0.0017 18.0 1.7 25 4-32 25-49 (77)
361 4efd_A Aminopeptidase; structu 20.7 26 0.00088 27.5 0.5 24 8-36 343-366 (522)
362 2ecz_A Sorbin and SH3 domain-c 20.6 49 0.0017 17.6 1.6 25 4-32 12-36 (70)
363 3fpp_A Macrolide-specific effl 20.6 21 0.00072 25.0 0.0 14 17-30 319-332 (341)
364 2dl5_A KIAA0769 protein; SH3 d 20.5 60 0.0021 17.8 2.0 24 5-32 19-42 (78)
365 1at0_A 17-hedgehog; developmen 20.3 54 0.0019 20.6 2.0 12 21-32 20-31 (145)
366 2ekh_A SH3 and PX domain-conta 20.0 76 0.0026 17.5 2.4 25 4-32 13-37 (80)
No 1
>3i18_A LMO2051 protein; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.70A {Listeria monocytogenes} PDB: 2kjk_A 3i1e_A
Probab=99.65 E-value=1.9e-15 Score=94.37 Aligned_cols=80 Identities=16% Similarity=0.220 Sum_probs=67.2
Q ss_pred CCCCCccccccccCCCCCCEEEEECCeecCCcccHHHHHHHHHhC-CCceEEEEEEeCCceEEEEEEeecC--CCCeeeE
Q psy12583 8 SEGYPRQDVDVYQGLVKDDIILEFGPINSSNFKSLQDIASTVRAG-VNTDIPITVLRNEGTRQRLVLRPQP--FEGQGLV 84 (96)
Q Consensus 8 ~~~~pa~~~~~~aGLk~GD~Il~vng~~~~~~~~~~di~~~i~~~-~g~~i~l~V~R~g~~~~~l~v~p~~--~~~~~~l 84 (96)
.++|||+ + ||++||+|++|||.+ +.+|.++..+++.. ++.++.++|.|++ +..++++++.. ..+++.|
T Consensus 15 ~~~spA~----~-GL~~GD~I~~Ing~~---v~~~~dl~~~l~~~~~g~~v~l~v~R~g-~~~~~~v~~~~~~~~~~~~i 85 (100)
T 3i18_A 15 KDDVPAA----D-VLHAGDLITEIDGNA---FKSSQEFIDYIHSKKVGDTVKINYKHGD-KNEQADIKLTAIDKKGTPGI 85 (100)
T ss_dssp CTTSGGG----G-TCCTTCEEEEETTBC---CSSHHHHHHHHHTSCTTCEEEEEEEETT-EEEEEEEECEECSTTCCEEC
T ss_pred CCCCchH----H-CCCCCCEEEEECCEE---CCCHHHHHHHHHhCCCCCEEEEEEEECC-EEEEEEEEEecCCCCCCcEE
Confidence 4789999 7 999999999999955 68899999999874 6889999999999 98888888864 3468899
Q ss_pred EEEEecceeecC
Q psy12583 85 GCYFLNVENVER 96 (96)
Q Consensus 85 Gi~~~~~~~~~~ 96 (96)
|+.+.+...-|+
T Consensus 86 Gi~~~~~~~~~~ 97 (100)
T 3i18_A 86 GITLVDDLEHHH 97 (100)
T ss_dssp SEEEGGGC-CCC
T ss_pred eEEEecCCcccc
Confidence 999988776664
No 2
>2kjp_A Uncharacterized protein YLBL; mixed alpha-beta protein, cell membrane, hydrolase, membrane, protease, serine protease, transmembrane; NMR {Bacillus subtilis}
Probab=99.59 E-value=1.2e-15 Score=94.22 Aligned_cols=73 Identities=15% Similarity=0.251 Sum_probs=62.4
Q ss_pred CCCCCccccccccCCCCCCEEEEECCeecCCcccHHHHHHHHHhC-CCceEEEEEEeCCceEEEEEEeecC---CCCeee
Q psy12583 8 SEGYPRQDVDVYQGLVKDDIILEFGPINSSNFKSLQDIASTVRAG-VNTDIPITVLRNEGTRQRLVLRPQP---FEGQGL 83 (96)
Q Consensus 8 ~~~~pa~~~~~~aGLk~GD~Il~vng~~~~~~~~~~di~~~i~~~-~g~~i~l~V~R~g~~~~~l~v~p~~---~~~~~~ 83 (96)
.++|||+ + ||++||+|++|||.+ +.+|.++..+++.. +|.+++|+|.|++ +.+++++++.. ..++..
T Consensus 9 ~~~spA~----~-GL~~GD~I~~InG~~---v~~~~~l~~~l~~~~~g~~v~l~v~R~g-~~~~~~v~~~~~~~~~gr~~ 79 (91)
T 2kjp_A 9 VENMPAK----G-KIEVGDKIISADGKN---YQSAEKLIDYISSKKAGDKVTLKIEREE-KEKRVTLTLKQFPDEPDRAG 79 (91)
T ss_dssp CCSSCCS----S-CCCSSCEEEEETTBC---CSSHHHHHHHHSSCCSSCEECEEEESSS-CEECCCEECCCCTTCTTSCS
T ss_pred CCCChHH----H-cCCCCCEEEEECCEE---CCCHHHHHHHHHcCCCCCEEEEEEEECC-EEEEEEEEEeccCCCCCcce
Confidence 5789999 8 999999999999955 67889999999887 6899999999999 99999988874 245777
Q ss_pred EEEEEe
Q psy12583 84 VGCYFL 89 (96)
Q Consensus 84 lGi~~~ 89 (96)
||+.+.
T Consensus 80 ~~~~~~ 85 (91)
T 2kjp_A 80 IGVSLE 85 (91)
T ss_dssp CCSCCC
T ss_pred eEEeee
Confidence 887764
No 3
>2kl1_A YLBL protein; structure genomics, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; NMR {Geobacillus thermodenitrificans}
Probab=99.55 E-value=2e-14 Score=88.86 Aligned_cols=73 Identities=19% Similarity=0.205 Sum_probs=60.8
Q ss_pred CCCCCccccccccCCCCCCEEEEECCeecCCcccHHHHHHHHHhC-CCceEEEEEEeCCceEEEEEEeecC---CCCeee
Q psy12583 8 SEGYPRQDVDVYQGLVKDDIILEFGPINSSNFKSLQDIASTVRAG-VNTDIPITVLRNEGTRQRLVLRPQP---FEGQGL 83 (96)
Q Consensus 8 ~~~~pa~~~~~~aGLk~GD~Il~vng~~~~~~~~~~di~~~i~~~-~g~~i~l~V~R~g~~~~~l~v~p~~---~~~~~~ 83 (96)
.++|||+ + ||++||+|++|||.+ +.+|.++..+++.. +|.++.++|.|++ +.+++++++.. ..++.+
T Consensus 13 ~~~spA~----~-GL~~GD~Il~InG~~---v~~~~~l~~~l~~~~~g~~v~l~v~R~g-~~~~~~v~~~~~~~~~~~~~ 83 (94)
T 2kl1_A 13 LPNMPAA----G-RLEAGDRIAAIDGQP---INTSEQIVSYVREKQAGDRVRVTFIRDR-KQHEAELVLKPFPHHPNQIG 83 (94)
T ss_dssp CTTSTTB----T-TBCTTCEEEEETTBC---CCCHHHHHHHHHHSCTTCCEEEEEEETT-EEEEEEECCCBCSSCTTCBC
T ss_pred CCCChHH----h-CCCCCCEEEEECCEE---CCCHHHHHHHHHhCCCCCEEEEEEEECC-EEEEEEEEEeeCCCCCCCcE
Confidence 4789999 8 999999999999955 57889999999876 6899999999999 99999998874 245677
Q ss_pred EEEEEe
Q psy12583 84 VGCYFL 89 (96)
Q Consensus 84 lGi~~~ 89 (96)
+|+.+.
T Consensus 84 ~~~~~~ 89 (94)
T 2kl1_A 84 LGVTLE 89 (94)
T ss_dssp CSCC--
T ss_pred EEEEee
Confidence 887764
No 4
>2zpm_A Regulator of sigma E protease; metalloproteinase, membrane protein, PDZ domain, hydrolase, inner membrane, membrane, metal-binding; HET: MLY MSE; 0.98A {Escherichia coli} PDB: 3id2_A 3id3_A 3id4_A
Probab=99.54 E-value=2.3e-14 Score=87.23 Aligned_cols=74 Identities=19% Similarity=0.223 Sum_probs=61.2
Q ss_pred CCCCCccccccccCCCCCCEEEEECCeecCCcccHHHHHHHHHhCCCceEEEEEEeCCceEEEEEEeecC--CCC--eee
Q psy12583 8 SEGYPRQDVDVYQGLVKDDIILEFGPINSSNFKSLQDIASTVRAGVNTDIPITVLRNEGTRQRLVLRPQP--FEG--QGL 83 (96)
Q Consensus 8 ~~~~pa~~~~~~aGLk~GD~Il~vng~~~~~~~~~~di~~~i~~~~g~~i~l~V~R~g~~~~~l~v~p~~--~~~--~~~ 83 (96)
.++|||+ +|||++||+|++|||.+ +.+|.++..+++.+.+.++.++|.|++ +.+++++++.. +.+ .++
T Consensus 12 ~~~spA~----~aGl~~GD~I~~ing~~---v~~~~~~~~~l~~~~g~~v~l~v~R~g-~~~~~~v~~~~~~~~~~~~g~ 83 (91)
T 2zpm_A 12 QPNSAAS----XAGLQAGDRIVXVDGQP---LTQWVTFVMLVRDNPGXSLALEIERQG-SPLSLTLIPESXPGNGXAIGF 83 (91)
T ss_dssp CTTSHHH----HTTCCTTCEEEEETTEE---CCCHHHHHHHHHHCTTCCEEEEEEETT-EEEEEEECCEEECCSSSCEEE
T ss_pred CCCChHH----hcCCCCCCEEEEECCeE---cCCHHHHHHHHhcCCCCeEEEEEEECC-eEEEEEEEEeeecCCCceEEE
Confidence 4789999 99999999999999966 578899999999888889999999999 99889888753 222 356
Q ss_pred EEEEEe
Q psy12583 84 VGCYFL 89 (96)
Q Consensus 84 lGi~~~ 89 (96)
+|+.+.
T Consensus 84 ~g~~~~ 89 (91)
T 2zpm_A 84 VGIEPX 89 (91)
T ss_dssp CCEECC
T ss_pred EEEEEe
Confidence 776543
No 5
>3rle_A Golgi reassembly-stacking protein 2; PDZ, tether, golgin, membrane protein; 1.65A {Homo sapiens} PDB: 4edj_A
Probab=99.43 E-value=1.3e-13 Score=95.77 Aligned_cols=74 Identities=18% Similarity=0.391 Sum_probs=63.4
Q ss_pred CCCCCccccccccCCCC-CCEEEEECCeecCCcccHHHHHHHHHhCCCceEEEEEEeCCc-eEEEEEEeecC-CCCeeeE
Q psy12583 8 SEGYPRQDVDVYQGLVK-DDIILEFGPINSSNFKSLQDIASTVRAGVNTDIPITVLRNEG-TRQRLVLRPQP-FEGQGLV 84 (96)
Q Consensus 8 ~~~~pa~~~~~~aGLk~-GD~Il~vng~~~~~~~~~~di~~~i~~~~g~~i~l~V~R~g~-~~~~l~v~p~~-~~~~~~l 84 (96)
.++|||+ +|||++ ||.|++|||. +.+|+++.++++.++++++.|+|.|++. +.++++++|.. |.+.++|
T Consensus 120 ~~~spA~----~aGl~~~GD~I~~ing~----v~~~~~l~~~l~~~~g~~v~l~v~r~~~~~~~~v~l~p~~~~~g~g~l 191 (209)
T 3rle_A 120 ESNSPAA----LAGLRPHSDYIIGADTV----MNESEDLFSLIETHEAKPLKLYVYNTDTDNCREVIITPNSAWGGEGSL 191 (209)
T ss_dssp CTTSHHH----HHTCCTTTEEEEEESSC----CCSSSCHHHHHHHTTTSCEEEEEEETTTTEEEEEEECCCTTSSSSSSS
T ss_pred CCCChHH----HCCCCCCCCEEEECCCE----eCCHHHHHHHHHhCCCCeEEEEEEECCceEEEEEEEEecCCCCCceee
Confidence 4789999 999999 9999999983 5677788889998888999999999752 56888999975 6778999
Q ss_pred EEEEe
Q psy12583 85 GCYFL 89 (96)
Q Consensus 85 Gi~~~ 89 (96)
||.+.
T Consensus 192 G~~~~ 196 (209)
T 3rle_A 192 GCGIG 196 (209)
T ss_dssp CEEEE
T ss_pred eEEec
Confidence 99986
No 6
>2i6v_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.63A {Vibrio cholerae} SCOP: b.36.1.5
Probab=99.41 E-value=5e-13 Score=81.23 Aligned_cols=58 Identities=12% Similarity=0.227 Sum_probs=48.5
Q ss_pred CCCCccccccccCCCCCCEEEEECCeecCCcccHHHHHHHHHhC-CCceEEEEEEeCCceEEEEEEe
Q psy12583 9 EGYPRQDVDVYQGLVKDDIILEFGPINSSNFKSLQDIASTVRAG-VNTDIPITVLRNEGTRQRLVLR 74 (96)
Q Consensus 9 ~~~pa~~~~~~aGLk~GD~Il~vng~~~~~~~~~~di~~~i~~~-~g~~i~l~V~R~g~~~~~l~v~ 74 (96)
++|||+ +|||++||.|++|||.+ +.+|.++.++++.. ++.++.++|+|+| +.++++++
T Consensus 28 ~~s~A~----~aGl~~GD~I~~ing~~---v~~~~d~~~~~~~~~~g~~v~l~v~R~g-~~~~~~v~ 86 (87)
T 2i6v_A 28 DPVLFE----SIGLQDGDMAVALNGLD---LTDPNVMNTLFQSMNEMTEMSLTVERDG-QQHDVYIQ 86 (87)
T ss_dssp CHHHHH----HTTCCTTCEEEEETTEE---TTCHHHHHHHHHTGGGCSEEEEEEEETT-EEEEEEEE
T ss_pred CCCHHH----HCCCCCCCEEEEECCEE---CCCHHHHHHHHHhcCCCCEEEEEEEECC-EEEEEEEE
Confidence 445669 99999999999999966 57889998888764 5789999999999 88777654
No 7
>3id1_A Regulator of sigma E protease; hydrolase, cell inner membrane, cell membrane, membrane, metal-binding, metalloprotease, transmembrane; 1.67A {Escherichia coli k-12} PDB: 2zpl_A
Probab=99.38 E-value=1.6e-12 Score=80.44 Aligned_cols=63 Identities=10% Similarity=0.045 Sum_probs=51.5
Q ss_pred CCCCCccccccccCCCCCCEEEEECCeecCCcccHHHHHHHHHhCCC-ceEEEEEEeCCc-eEEEEEEeecC
Q psy12583 8 SEGYPRQDVDVYQGLVKDDIILEFGPINSSNFKSLQDIASTVRAGVN-TDIPITVLRNEG-TRQRLVLRPQP 77 (96)
Q Consensus 8 ~~~~pa~~~~~~aGLk~GD~Il~vng~~~~~~~~~~di~~~i~~~~g-~~i~l~V~R~g~-~~~~l~v~p~~ 77 (96)
.++|||+ +|||++||+|++|||.+ +.+|+++..++..+.+ +++.++|.|++. ...++++....
T Consensus 10 ~~~spA~----~aGl~~GD~I~~ing~~---v~~~~d~~~~l~~~~~~~~v~l~v~R~g~~~~~~~~l~l~~ 74 (95)
T 3id1_A 10 AANSIAA----EAQIAPGTELKAVDGIE---TPDWDAVRLQLVDKIGDESTTITVAPFGSDQRRDVKLDLRH 74 (95)
T ss_dssp CTTSHHH----HTTCCTTCEEEEETTEE---CSSHHHHHHHHHHTTTCSEEEEEEECTTCCCCEEEEEECTT
T ss_pred CCCCHHH----HcCCCCCCEEEEECCEE---CCCHHHHHHHHHHhcCCCcEEEEEEECCCCceEEEEEEccc
Confidence 5789999 99999999999999966 6789999999987655 799999999872 24555655544
No 8
>2l97_A HTRA, putative serine protease; HTRA-PDZ, protein binding; NMR {Streptococcus pneumoniae}
Probab=99.37 E-value=3.7e-12 Score=83.23 Aligned_cols=61 Identities=21% Similarity=0.278 Sum_probs=53.9
Q ss_pred CCCCCccccccccCCCCCCEEEEECCeecCCcccHHHHHHHHHhC-CCceEEEEEEeCCceEEEEEEeecC
Q psy12583 8 SEGYPRQDVDVYQGLVKDDIILEFGPINSSNFKSLQDIASTVRAG-VNTDIPITVLRNEGTRQRLVLRPQP 77 (96)
Q Consensus 8 ~~~~pa~~~~~~aGLk~GD~Il~vng~~~~~~~~~~di~~~i~~~-~g~~i~l~V~R~g~~~~~l~v~p~~ 77 (96)
.+||||+ |||++||+|++|||.+ +.+|.++..+++.. +|.+++++|.|+| +.+++++++..
T Consensus 65 ~~~spA~-----aGL~~GD~I~~inG~~---v~~~~~l~~~l~~~~~g~~v~l~v~R~g-~~~~~~v~~~~ 126 (134)
T 2l97_A 65 QSNMPAN-----GHLEKYDVITKVDDKE---IASSTDLQSALYNHSIGDTIKITYYRNG-KEETTSIKLNK 126 (134)
T ss_dssp STTSGGG-----TTSCSSCEEEEETTEE---CCCHHHHHHHHHHSSTTCEEEEEEEETT-EEEEEEEECCC
T ss_pred CCCCchH-----HCCCCCCEEEEECCEE---cCCHHHHHHHHHhCCCCCEEEEEEEECC-EEEEEEEEEcc
Confidence 4788998 8999999999999966 57888999999876 6899999999999 99999998864
No 9
>2i4s_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.92A {Vibrio cholerae} SCOP: b.36.1.5
Probab=99.35 E-value=1.9e-12 Score=81.15 Aligned_cols=58 Identities=12% Similarity=0.249 Sum_probs=47.3
Q ss_pred CCCCccccccccCCCCCCEEEEECCeecCCcccHHHHHHHHHh-CCCceEEEEEEeCCceEEEEEEe
Q psy12583 9 EGYPRQDVDVYQGLVKDDIILEFGPINSSNFKSLQDIASTVRA-GVNTDIPITVLRNEGTRQRLVLR 74 (96)
Q Consensus 9 ~~~pa~~~~~~aGLk~GD~Il~vng~~~~~~~~~~di~~~i~~-~~g~~i~l~V~R~g~~~~~l~v~ 74 (96)
+++||+ +|||++||+|++|||.+ +.+|.++..+++. .++.++.++|+|+| +.+++++.
T Consensus 46 pas~A~----~aGl~~GDvI~~ing~~---v~~~~d~~~~~~~~~~g~~v~l~v~R~g-~~~~~~v~ 104 (105)
T 2i4s_A 46 DPVLFE----SIGLQDGDMAVALNGLD---LTDPNVMNTLFQSMNEMTEMSLTVERDG-QQHDVYIQ 104 (105)
T ss_dssp CTHHHH----HHTCCTTCEEEEETTEE---TTSTTHHHHHHHHHTTCSEEEEEEEETT-EEEEEEEE
T ss_pred CCCHHH----HcCCCCCCEEEEECCEE---CCCHHHHHHHHHhcCCCCeEEEEEEECC-EEEEEEEe
Confidence 344559 99999999999999976 5677778888875 56789999999999 88777654
No 10
>2hga_A Conserved protein MTH1368; GFT structural genomics, PSI, protein structure initiative; NMR {Methanothermobacterthermautotrophicus} SCOP: b.36.1.6
Probab=99.35 E-value=4e-12 Score=82.60 Aligned_cols=72 Identities=19% Similarity=0.209 Sum_probs=57.5
Q ss_pred CCCCCccccccccCCCCCCEEEEECCeecCCcccHHHHHHHHHh-CCCceEEEEEEeCCceEEEEEEeecC-CCCeeeEE
Q psy12583 8 SEGYPRQDVDVYQGLVKDDIILEFGPINSSNFKSLQDIASTVRA-GVNTDIPITVLRNEGTRQRLVLRPQP-FEGQGLVG 85 (96)
Q Consensus 8 ~~~~pa~~~~~~aGLk~GD~Il~vng~~~~~~~~~~di~~~i~~-~~g~~i~l~V~R~g~~~~~l~v~p~~-~~~~~~lG 85 (96)
.+++||+ +| |++||+|++|||.+ +.+|.++..+++. .++.++.++| |++ + +.+++.+.. +.+.+.||
T Consensus 33 ~~~spA~----~a-L~~GD~Il~InG~~---v~~~~dl~~~l~~~~~g~~v~l~V-R~g-~-~~v~l~~~~~~~~~~~lG 101 (125)
T 2hga_A 33 VPGSPAS----KV-LTPGLVIESINGMP---TSNLTTYSAALKTISVGEVINITT-DQG-T-FHLKTGRNPNNSSRAYMG 101 (125)
T ss_dssp CSSSGGG----GT-SCTTCEEEEETTEE---CSSHHHHHHHHTTCCTTCEEEEEE-TTE-E-EEEECCBCSSSCCSCBCC
T ss_pred CCCChHH----Hh-cCCCCEEEEECCEE---cCCHHHHHHHHHhcCCCCEEEEEE-ECC-E-EEEEEeccCCCCCceEEE
Confidence 4789999 99 99999999999966 5788999999885 5688999999 998 7 666555432 23456899
Q ss_pred EEEec
Q psy12583 86 CYFLN 90 (96)
Q Consensus 86 i~~~~ 90 (96)
+.+.+
T Consensus 102 i~~~~ 106 (125)
T 2hga_A 102 IRTSN 106 (125)
T ss_dssp EEEEC
T ss_pred EEecC
Confidence 88764
No 11
>1qau_A Neuronal nitric oxide synthase (residues 1-130); beta-finger, oxidoreductase; 1.25A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1qav_B
Probab=99.33 E-value=5e-12 Score=79.51 Aligned_cols=64 Identities=19% Similarity=0.171 Sum_probs=54.6
Q ss_pred CCCCCccccccccCC-CCCCEEEEECCeecCCcccHHHHHHHHHhCCCceEEEEEEeCCceEEEEEEeecC
Q psy12583 8 SEGYPRQDVDVYQGL-VKDDIILEFGPINSSNFKSLQDIASTVRAGVNTDIPITVLRNEGTRQRLVLRPQP 77 (96)
Q Consensus 8 ~~~~pa~~~~~~aGL-k~GD~Il~vng~~~~~~~~~~di~~~i~~~~g~~i~l~V~R~g~~~~~l~v~p~~ 77 (96)
.+++||+ ++|| ++||+|++|||.++.+. +++++..+++..++.++.++|.|++ +...+++.+..
T Consensus 34 ~~~spA~----~aGll~~GD~I~~ing~~v~~~-~~~~~~~~l~~~~g~~v~l~v~R~g-~~~~~~~~~~~ 98 (112)
T 1qau_A 34 IRGGAAE----QSGLIQAGDIILAVNDRPLVDL-SYDSALEVLRGIASETHVVLILRGP-EGFTTHLETTF 98 (112)
T ss_dssp CTTSHHH----HHTCCCTTCEEEEETTEECTTS-CHHHHHHHHHHSCSSSEEEEEEECC-TTSEEEEEEEE
T ss_pred CCCChHH----HcCCCCCCCEEEEECCEECCCC-CHHHHHHHHHhCCCCcEEEEEEeCC-cccceEeeeec
Confidence 4789999 9998 99999999999875432 3899999999888899999999999 87777777653
No 12
>3cyy_A Tight junction protein ZO-1; protein-ligand complex, cell junction, membrane, phosphoprot domain, tight junction, transmembrane; 2.40A {Homo sapiens}
Probab=99.31 E-value=3.1e-12 Score=77.62 Aligned_cols=61 Identities=20% Similarity=0.299 Sum_probs=42.5
Q ss_pred CCCCCccccccccC-CCCCCEEEEECCeecCCcccHHHHHHHHHhCCCceEEEEEEeCCceEEEEEEee
Q psy12583 8 SEGYPRQDVDVYQG-LVKDDIILEFGPINSSNFKSLQDIASTVRAGVNTDIPITVLRNEGTRQRLVLRP 75 (96)
Q Consensus 8 ~~~~pa~~~~~~aG-Lk~GD~Il~vng~~~~~~~~~~di~~~i~~~~g~~i~l~V~R~g~~~~~l~v~p 75 (96)
.+++||+ ++| |++||+|++|||.++... +|.++..+++... .++.++|.|++ +...+++.|
T Consensus 31 ~~~s~A~----~aG~l~~GD~I~~ing~~v~~~-~~~~~~~~l~~~~-~~v~l~v~r~g-~~~~~~v~p 92 (92)
T 3cyy_A 31 SQDSLAA----RDGNIQEGDVVLKINGTVTENM-SLTDAKTLIERSK-GKLKMVVQRDE-RATLLNVPD 92 (92)
T ss_dssp CTTCHHH----HSCCCCTTCEEEEETTEECTTC-CHHHHHHHHHTTT-TEEEEEEEC------------
T ss_pred CCCChHH----hcCCCCCCCEEEEECCEECCCC-CHHHHHHHHHcCC-CcEEEEEEeCC-ceeeeeCCC
Confidence 4789999 999 999999999999774322 7889999998755 49999999999 887777654
No 13
>2pzd_A Serine protease HTRA2; PDZ domain, apoptosis, mitochondria, peptid module, hydrolase; 2.75A {Homo sapiens} SCOP: b.36.1.4
Probab=99.30 E-value=6.8e-12 Score=79.11 Aligned_cols=60 Identities=23% Similarity=0.428 Sum_probs=52.8
Q ss_pred CCCCCccccccccCCCCCCEEEEECCeecCCcccHHHHHHHHHhCCCceEEEEEEeCCceEEEEEEeecC
Q psy12583 8 SEGYPRQDVDVYQGLVKDDIILEFGPINSSNFKSLQDIASTVRAGVNTDIPITVLRNEGTRQRLVLRPQP 77 (96)
Q Consensus 8 ~~~~pa~~~~~~aGLk~GD~Il~vng~~~~~~~~~~di~~~i~~~~g~~i~l~V~R~g~~~~~l~v~p~~ 77 (96)
.++|||+ +|||++||.|++|||.+ +.++.++..+++. +.++.++|.|++ +.+++++++..
T Consensus 43 ~~~spA~----~aGl~~GD~I~~ing~~---v~~~~~~~~~l~~--~~~v~l~v~R~g-~~~~~~v~~~~ 102 (113)
T 2pzd_A 43 ILGSPAH----RAGLRPGDVILAIGEQM---VQNAEDVYEAVRT--QSQLAVQIRRGR-ETLTLYVTPEV 102 (113)
T ss_dssp BTTSHHH----HHTCCTTCEEEEETTEE---CCSHHHHHHHHHH--CSSEEEEEEETT-EEEEEEECCEE
T ss_pred CCCChHH----HcCCCCCCEEEEECCEE---CCCHHHHHHHHhC--CCeEEEEEEECC-EEEEEEEEEee
Confidence 4789999 99999999999999976 4678889888887 578999999999 99999988864
No 14
>1wf7_A Enigma homologue protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.29 E-value=1.6e-12 Score=80.96 Aligned_cols=63 Identities=11% Similarity=0.179 Sum_probs=53.0
Q ss_pred CCCCCccccccccCCCCCCEEEEECCeecCCcccHHHHHHHHHhCCCceEEEEEEeCCceEEEEEEeecC
Q psy12583 8 SEGYPRQDVDVYQGLVKDDIILEFGPINSSNFKSLQDIASTVRAGVNTDIPITVLRNEGTRQRLVLRPQP 77 (96)
Q Consensus 8 ~~~~pa~~~~~~aGLk~GD~Il~vng~~~~~~~~~~di~~~i~~~~g~~i~l~V~R~g~~~~~l~v~p~~ 77 (96)
.+++||+ +|||++||+|++|||.++.++ .+.++..+++.. +.++.|+|+|++ +..+++++|..
T Consensus 37 ~~~spA~----~aGL~~GD~I~~ing~~v~~~-~~~~~~~~~~~~-g~~v~l~v~R~g-~~~~~~v~p~~ 99 (103)
T 1wf7_A 37 KDGGKAS----QAHVRIGDVVLSIDGISAQGM-THLEAQNKIKAC-TGSLNMTLQRAS-AAAKSEPVSSG 99 (103)
T ss_dssp CTTCHHH----HTTCCTTCBEEEETTEECSSC-CHHHHHHHHHHC-SSEEEEEECCCS-CCCCCCCCCCC
T ss_pred CCCCHHH----HcCCCCCCEEEEECCEECCCC-CHHHHHHHHHcC-CCeEEEEEEeCC-CcCCCCCCCCC
Confidence 4789999 999999999999999887655 457777777765 678999999999 88888887753
No 15
>2p3w_A Probable serine protease HTRA3; PDZ domain, phage derived high affinity ligand, protein BIND; 1.70A {Homo sapiens}
Probab=99.27 E-value=7.1e-12 Score=79.01 Aligned_cols=60 Identities=17% Similarity=0.285 Sum_probs=51.9
Q ss_pred CCCCCccccccccCCCCCCEEEEECCeecCCcccHHHHHHHHHhCCCceEEEEEEeCCceEEEEEEeecC
Q psy12583 8 SEGYPRQDVDVYQGLVKDDIILEFGPINSSNFKSLQDIASTVRAGVNTDIPITVLRNEGTRQRLVLRPQP 77 (96)
Q Consensus 8 ~~~~pa~~~~~~aGLk~GD~Il~vng~~~~~~~~~~di~~~i~~~~g~~i~l~V~R~g~~~~~l~v~p~~ 77 (96)
.++|||+ ++||++||+|++|||++ +.+|.++..+++ .+.++.++|.|++ +.+++++++..
T Consensus 43 ~~~spA~----~aGl~~GD~I~~ing~~---v~~~~~~~~~l~--~g~~v~l~v~R~g-~~~~~~v~~~~ 102 (112)
T 2p3w_A 43 APNSPSQ----RGGIQDGDIIVKVNGRP---LVDSSELQEAVL--TESPLLLEVRRGN-DDLLFSIAPEV 102 (112)
T ss_dssp CTTSHHH----HHTCCTTCEEEEETTEE---CCSHHHHHHHHH--HCSSEEEEEEETT-EEEEEEECCEE
T ss_pred CCCChHH----HCCCCCCCEEEEECCEE---CCCHHHHHHHHh--CCCeEEEEEEECC-EEEEEEEEEee
Confidence 4789999 99999999999999976 567888888885 3678999999999 99899888764
No 16
>2awx_A Synapse associated protein 97; membrane protein, synaptic signaling, trafficking protein; HET: HIS; 1.80A {Rattus norvegicus} PDB: 2g2l_A 2awu_A 2aww_A 3rl8_A
Probab=99.26 E-value=8.5e-12 Score=77.82 Aligned_cols=64 Identities=11% Similarity=0.135 Sum_probs=45.8
Q ss_pred CCCCCccccccccC-CCCCCEEEEECCeecCCcccHHHHHHHHHhCCCceEEEEEEeCCceEEEEEEeecCC
Q psy12583 8 SEGYPRQDVDVYQG-LVKDDIILEFGPINSSNFKSLQDIASTVRAGVNTDIPITVLRNEGTRQRLVLRPQPF 78 (96)
Q Consensus 8 ~~~~pa~~~~~~aG-Lk~GD~Il~vng~~~~~~~~~~di~~~i~~~~g~~i~l~V~R~g~~~~~l~v~p~~~ 78 (96)
.+++||+ ++| |++||+|++|||.++.+. ++.++...++.. +..+.|+|.|++ ....+.++|..|
T Consensus 41 ~~~spA~----~aG~L~~GD~I~~vng~~v~~~-~~~~~~~~~~~~-~~~v~l~v~R~~-~~~~~~~~p~~w 105 (105)
T 2awx_A 41 IEGGAAH----KDGKLQIGDKLLAVNSVSLEEV-THEEAVTALKNT-SDFVYLKVAKPT-SMYISRHHHHHH 105 (105)
T ss_dssp CTTSHHH----HHCCCCTTCEEEEETTEECTTC-BHHHHHHHHHSC-CSEEEEEEECCC-C-----------
T ss_pred CCCCHHH----HCCCCCCCCEEEEECCEECCCC-CHHHHHHHHHcC-CCeEEEEEEcCC-CCCCccccccCC
Confidence 4789999 999 999999999999886554 577887888765 689999999999 888888888654
No 17
>1te0_A Protease DEGS; two domains, serine protease, PDZ, alpha-beta protein, hydro; 2.20A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3gdv_A* 3gcn_A* 3gds_A* 3gdu_A* 3gco_A* 1sot_A 1soz_A 1vcw_A 2r3y_A
Probab=99.26 E-value=1.8e-11 Score=89.44 Aligned_cols=62 Identities=21% Similarity=0.282 Sum_probs=55.3
Q ss_pred CCCCCccccccccCCCCCCEEEEECCeecCCcccHHHHHHHHHh-CCCceEEEEEEeCCceEEEEEEeecC
Q psy12583 8 SEGYPRQDVDVYQGLVKDDIILEFGPINSSNFKSLQDIASTVRA-GVNTDIPITVLRNEGTRQRLVLRPQP 77 (96)
Q Consensus 8 ~~~~pa~~~~~~aGLk~GD~Il~vng~~~~~~~~~~di~~~i~~-~~g~~i~l~V~R~g~~~~~l~v~p~~ 77 (96)
.++|||+ +|||++||+|++|||++ +.+|.++..+++. .+|.+++|+|+|++ +.+++++++..
T Consensus 252 ~~~spA~----~aGL~~GD~I~~ing~~---v~~~~~l~~~l~~~~~g~~v~l~v~R~g-~~~~~~v~~~~ 314 (318)
T 1te0_A 252 SPDGPAA----NAGIQVNDLIISVDNKP---AISALETMDQVAEIRPGSVIPVVVMRDD-KQLTLQVTIQE 314 (318)
T ss_dssp CTTSTTT----TTCCCTTCCEEEETTEE---CCCHHHHHHHHHTSCTTCEEEEEEESSS-CEEEEEEECEE
T ss_pred CCCChHH----HCCCCCCCEEEEECCEE---cCCHHHHHHHHHhcCCCCEEEEEEEECC-EEEEEEEEEcc
Confidence 4789999 99999999999999966 5778899999987 67899999999999 99999888763
No 18
>2vz5_A TAX1-binding protein 3; WNT signaling pathway, protein binding, nucleus, cytoplasm, PDZ domain; 1.74A {Homo sapiens} PDB: 3dj1_A 3diw_A 2l4s_A 2l4t_A 3gj9_A 2kg2_A 3dj3_A
Probab=99.25 E-value=1e-11 Score=81.68 Aligned_cols=62 Identities=16% Similarity=0.202 Sum_probs=47.7
Q ss_pred CCCCCccccccccCCCCCCEEEEECCeecCCcccHHHHHHHHHhCCCceEEEEEEeCCceEEEEEEee
Q psy12583 8 SEGYPRQDVDVYQGLVKDDIILEFGPINSSNFKSLQDIASTVRAGVNTDIPITVLRNEGTRQRLVLRP 75 (96)
Q Consensus 8 ~~~~pa~~~~~~aGLk~GD~Il~vng~~~~~~~~~~di~~~i~~~~g~~i~l~V~R~g~~~~~l~v~p 75 (96)
.+|+||+ +|||++||+|++|||.++.+. ++.++..+++..+|.++.|+|.|++ +...+.+..
T Consensus 72 ~~~spA~----~aGL~~GD~I~~vng~~v~~~-~~~~~~~~l~~~~g~~v~l~v~R~g-~~~~v~~~~ 133 (139)
T 2vz5_A 72 SEGGPAE----IAGLQIGDKIMQVNGWDMTMV-THDQARKRLTKRSEEVVRLLVTRQS-LQKAVQQSM 133 (139)
T ss_dssp CTTSHHH----HHTCCTTCEEEEETTEECTTC-CHHHHHHHHCCTTCSEEEEEEEECC--------CC
T ss_pred CCCCHHH----HCCCCCCCEEEEECCEEcCCC-CHHHHHHHHHhCCCCEEEEEEEECC-EEEEEEEee
Confidence 4789999 999999999999999875432 6889999999877899999999999 776665543
No 19
>2vsp_A PDZ domain-containing protein 1; membrane, cytoplasm, phosphoprotein, transport protein, CAsp; 2.60A {Homo sapiens} PDB: 2eej_A
Probab=99.24 E-value=1.2e-11 Score=75.31 Aligned_cols=54 Identities=17% Similarity=0.417 Sum_probs=44.1
Q ss_pred CCCCCccccccccCCCCCCEEEEECCeecCCcccHHHHHHHHHhCCCceEEEEEEeCCceE
Q psy12583 8 SEGYPRQDVDVYQGLVKDDIILEFGPINSSNFKSLQDIASTVRAGVNTDIPITVLRNEGTR 68 (96)
Q Consensus 8 ~~~~pa~~~~~~aGLk~GD~Il~vng~~~~~~~~~~di~~~i~~~~g~~i~l~V~R~g~~~ 68 (96)
.+++||+ +|||++||+|++|||.++... ++.++..+++.. +.++.|+|.|++ ..
T Consensus 35 ~~~spA~----~aGl~~GD~I~~ing~~v~~~-~~~~~~~~l~~~-g~~v~l~v~r~~-~~ 88 (91)
T 2vsp_A 35 QKGGPAD----LAGLEDEDVIIEVNGVNVLDE-PYEKVVDRIQSS-GKNVTLLVCGKK-AQ 88 (91)
T ss_dssp CTTSHHH----HTTCCTTCEEEEETTEECTTS-CHHHHHHHHTTS-CSEEEEEEEC-----
T ss_pred CCCChHH----HcCCCCCCEEEEECCEECCCC-CHHHHHHHHHcC-CCEEEEEEEeCC-cc
Confidence 4789999 999999999999999875322 789999999887 889999999987 43
No 20
>2pkt_A PDZ and LIM domain protein 1; PDZ domain, structural genomics, structural genomics consort unknown function; HET: PG4; 1.50A {Homo sapiens} PDB: 2v1w_A*
Probab=99.24 E-value=3.6e-12 Score=77.50 Aligned_cols=55 Identities=20% Similarity=0.332 Sum_probs=45.6
Q ss_pred CCCCCccccccccCCCCCCEEEEECCeecCCcccHHHHHHHHHhCCCceEEEEEEeCCceEE
Q psy12583 8 SEGYPRQDVDVYQGLVKDDIILEFGPINSSNFKSLQDIASTVRAGVNTDIPITVLRNEGTRQ 69 (96)
Q Consensus 8 ~~~~pa~~~~~~aGLk~GD~Il~vng~~~~~~~~~~di~~~i~~~~g~~i~l~V~R~g~~~~ 69 (96)
.++|||+ +|||++||+|++|||.++.++. ..++..+++. ++.++.++|.|++ +..
T Consensus 35 ~~~spA~----~aGl~~GD~I~~ing~~v~~~~-~~~~~~~l~~-~g~~v~l~v~R~g-~~~ 89 (91)
T 2pkt_A 35 TPGSKAA----LANLCIGDVITAIDGENTSNMT-HLEAQNRIKG-CTDNLTLTVARSE-HES 89 (91)
T ss_dssp CTTSHHH----HTTCCTTCEEEEETTEECTTCC-HHHHHHHHHT-CSSEEEEEEEEEC-CCC
T ss_pred CCCCHHH----HcCCCCCCEEEEECCEECCCCC-HHHHHHHHHc-CCCeEEEEEEECC-ccc
Confidence 4789999 9999999999999998865443 3377788887 7899999999988 543
No 21
>3stj_A Protease DEGQ; serine protease, PDZ domain, protease, chaperone, DEGP, DEGQ hydrolase; 2.60A {Escherichia coli}
Probab=99.23 E-value=1.7e-11 Score=91.06 Aligned_cols=62 Identities=18% Similarity=0.253 Sum_probs=55.5
Q ss_pred CCCCCccccccccCCCCCCEEEEECCeecCCcccHHHHHHHHHhC-CCceEEEEEEeCCceEEEEEEeecC
Q psy12583 8 SEGYPRQDVDVYQGLVKDDIILEFGPINSSNFKSLQDIASTVRAG-VNTDIPITVLRNEGTRQRLVLRPQP 77 (96)
Q Consensus 8 ~~~~pa~~~~~~aGLk~GD~Il~vng~~~~~~~~~~di~~~i~~~-~g~~i~l~V~R~g~~~~~l~v~p~~ 77 (96)
.+||||+ +|||++||+|++|||++ +.+|.++..+++.. +|.+++|+|.|+| +.+++++++..
T Consensus 271 ~~~spA~----~aGL~~GDvI~~ing~~---v~~~~~l~~~l~~~~~g~~v~l~v~R~g-~~~~~~v~l~~ 333 (345)
T 3stj_A 271 LPGSGSA----KAGVKAGDIITSLNGKP---LNSFAELRSRIATTEPGTKVKLGLLRNG-KPLEVEVTLDT 333 (345)
T ss_dssp CTTSHHH----HHTCCTTCEECEETTEE---CSCHHHHHHHHHTSCTTCEEEEEEEETT-EEEEEEEECEE
T ss_pred ccCChHH----HcCCCCCCEEEEECCEE---CCCHHHHHHHHHhcCCCCEEEEEEEECC-EEEEEEEEEcc
Confidence 4789999 99999999999999966 57899999999874 7899999999999 99999988864
No 22
>2pa1_A PDZ and LIM domain protein 2; PDZ domain, structural genomics, structural genomics consort metal binding protein; 1.70A {Homo sapiens} PDB: 3pdv_A
Probab=99.23 E-value=1.9e-11 Score=73.68 Aligned_cols=52 Identities=15% Similarity=0.165 Sum_probs=45.5
Q ss_pred CCCCCccccccccCCCCCCEEEEECCeecCCcccHHHHHHHHHhCCCceEEEEEEeCC
Q psy12583 8 SEGYPRQDVDVYQGLVKDDIILEFGPINSSNFKSLQDIASTVRAGVNTDIPITVLRNE 65 (96)
Q Consensus 8 ~~~~pa~~~~~~aGLk~GD~Il~vng~~~~~~~~~~di~~~i~~~~g~~i~l~V~R~g 65 (96)
.+++||+ +|||++||+|++|||.++.+. ++.++.++++..+ .++.++|.|++
T Consensus 34 ~~~spA~----~aGL~~GD~I~~ing~~v~~~-~~~~~~~~l~~~~-~~v~l~v~R~~ 85 (87)
T 2pa1_A 34 AERGKAK----DADLRPGDIIVAINGESAEGM-LHAEAQSKIRQSP-SPLRLQLDRIT 85 (87)
T ss_dssp CSSSHHH----HTTCCTTCEEEEETTEESTTC-CHHHHHHHHHTCC-SSEEEEEEECC
T ss_pred CCCChHH----HcCCCCCCEEEEECCEECCCC-CHHHHHHHHHcCC-CeEEEEEEecC
Confidence 4789999 999999999999999875433 3899999999877 89999999987
No 23
>1y8t_A Hypothetical protein RV0983; serine protease, structural genomics, PSI, protein structure initiative; 2.00A {Mycobacterium tuberculosis} SCOP: b.36.1.4 b.47.1.1 PDB: 2z9i_A
Probab=99.23 E-value=4.2e-11 Score=87.51 Aligned_cols=62 Identities=11% Similarity=0.167 Sum_probs=54.8
Q ss_pred CCCCCccccccccCCCCCCEEEEECCeecCCcccHHHHHHHHHh-CCCceEEEEEEe-CCceEEEEEEeecC
Q psy12583 8 SEGYPRQDVDVYQGLVKDDIILEFGPINSSNFKSLQDIASTVRA-GVNTDIPITVLR-NEGTRQRLVLRPQP 77 (96)
Q Consensus 8 ~~~~pa~~~~~~aGLk~GD~Il~vng~~~~~~~~~~di~~~i~~-~~g~~i~l~V~R-~g~~~~~l~v~p~~ 77 (96)
.+++||+ +|||++||+|++|||.+ +.+|.++..++.. .+|.+++|+|+| +| +.+++++++..
T Consensus 250 ~~~spA~----~aGl~~GD~I~~ing~~---v~~~~~l~~~l~~~~~g~~v~l~v~R~~g-~~~~~~v~~~~ 313 (324)
T 1y8t_A 250 VAGGAAA----NAGVPKGVVVTKVDDRP---INSADALVAAVRSKAPGATVALTFQDPSG-GSRTVQVTLGK 313 (324)
T ss_dssp CTTSTTT----TTTCCTTCEEEEETTEE---CCSHHHHHHHHHTSCTTCEEEEEEECSSC-CEEEEEEECEE
T ss_pred CCCChHH----HcCCCCCCEEEEECCEE---CCCHHHHHHHHHhcCCCCEEEEEEEECCC-CEEEEEEEEcc
Confidence 4789999 99999999999999966 5788999999976 478899999999 99 88888888764
No 24
>2v90_A PDZ domain-containing protein 3; membrane, protein-binding; 2.00A {Homo sapiens}
Probab=99.22 E-value=5.2e-12 Score=77.46 Aligned_cols=54 Identities=15% Similarity=0.310 Sum_probs=46.4
Q ss_pred CCCCCccccccccCCCCCCEEEEECCeecCCcccHHHHHHHHHhCCCceEEEEEEeCCceE
Q psy12583 8 SEGYPRQDVDVYQGLVKDDIILEFGPINSSNFKSLQDIASTVRAGVNTDIPITVLRNEGTR 68 (96)
Q Consensus 8 ~~~~pa~~~~~~aGLk~GD~Il~vng~~~~~~~~~~di~~~i~~~~g~~i~l~V~R~g~~~ 68 (96)
.+++||+ +|||++||+|++|||.++.+. ++.++..+++.. +.++.|+|.|++ +.
T Consensus 38 ~~~spA~----~aGl~~GD~I~~ing~~v~~~-~~~~~~~~l~~~-g~~v~l~v~r~~-~~ 91 (96)
T 2v90_A 38 DPGLPAK----KAGMQAGDRLVAVAGESVEGL-GHEETVSRIQGQ-GSCVSLTVVDPE-AD 91 (96)
T ss_dssp CTTSHHH----HTTCCTTEEEEEETTEECTTC-CHHHHHHHHHTT-TTEEEEEEECCC-TT
T ss_pred CCCChHH----HcCCCCCCEEEEECCEECCCC-CHHHHHHHHHcC-CCEEEEEEECCC-Cc
Confidence 4789999 999999999999999875442 488999999885 889999999988 54
No 25
>2eaq_A LIM domain only protein 7; conserved hypothetical protein, structural genomics, NPPSFA; 1.46A {Homo sapiens}
Probab=99.22 E-value=7e-12 Score=75.94 Aligned_cols=53 Identities=17% Similarity=0.250 Sum_probs=44.9
Q ss_pred CCCCCccccccccCCCCCCEEEEECCeecCCcccHHHHHHHHHhC-CCceEEEEEEeCC
Q psy12583 8 SEGYPRQDVDVYQGLVKDDIILEFGPINSSNFKSLQDIASTVRAG-VNTDIPITVLRNE 65 (96)
Q Consensus 8 ~~~~pa~~~~~~aGLk~GD~Il~vng~~~~~~~~~~di~~~i~~~-~g~~i~l~V~R~g 65 (96)
.++|||+ +|||++||+|++|||.++.. .+|.++..+++.. ++.++.++|.|++
T Consensus 36 ~~~spA~----~aGl~~GD~I~~ing~~v~~-~~~~~~~~~l~~~~~g~~v~l~v~R~g 89 (90)
T 2eaq_A 36 EAGSPAE----FSQLQVDDEIIAINNTKFSY-NDSKEWEEAMAKAQETGHLVMDVRRYG 89 (90)
T ss_dssp CTTSHHH----HTTCCTTCEEEEETTEECCT-TCHHHHHHHHHHHHHHTEEEEEEEEEC
T ss_pred CCCChHH----HcCCCCCCEEEEECCEEccC-CCHHHHHHHHHhcCCCCEEEEEEEeCC
Confidence 4789999 99999999999999977421 5788999888863 5789999999987
No 26
>1wh1_A KIAA1095 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.21 E-value=5.1e-12 Score=81.25 Aligned_cols=61 Identities=11% Similarity=0.167 Sum_probs=52.8
Q ss_pred CCCCCccccccccC-CCCCCEEEEECCeecCCcccHHHHHHHHHhCCCceEEEEEEeCCceEEEEEEeec
Q psy12583 8 SEGYPRQDVDVYQG-LVKDDIILEFGPINSSNFKSLQDIASTVRAGVNTDIPITVLRNEGTRQRLVLRPQ 76 (96)
Q Consensus 8 ~~~~pa~~~~~~aG-Lk~GD~Il~vng~~~~~~~~~~di~~~i~~~~g~~i~l~V~R~g~~~~~l~v~p~ 76 (96)
.+++||+ +|| |++||+|++|||++ +.+|.++..+++..++.++.|+|.|++ +.+...+.+.
T Consensus 56 ~~~spA~----~aG~l~~GD~I~~ing~~---v~~~~~~~~~l~~~~g~~v~l~v~R~g-~~~~~~~~~~ 117 (124)
T 1wh1_A 56 DPNSIAA----KDGRIREGDRIIQINGIE---VQNREEAVALLTSEENKNFSLLIARPE-LQLDEGWMDD 117 (124)
T ss_dssp CSSSHHH----HTCCCCTTCEEEEESSCB---CCSHHHHHHHHTCSSCCSCCEEEEECS-SCCCCCCCCS
T ss_pred CCCCHHH----HcCCCCCCCEEEEECCEE---CCCHHHHHHHHHhCCCCEEEEEEEECC-EEeecccCCC
Confidence 4789999 999 99999999999965 567899999999877889999999999 7777666654
No 27
>1vb7_A PDZ and LIM domain 2; PDZ domain PDZ-LIM protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.20 E-value=1.8e-11 Score=74.93 Aligned_cols=52 Identities=17% Similarity=0.238 Sum_probs=45.1
Q ss_pred CCCCCccccccccCCCCCCEEEEECCeecCCcccHHHHHHHHHhCCCceEEEEEEeCC
Q psy12583 8 SEGYPRQDVDVYQGLVKDDIILEFGPINSSNFKSLQDIASTVRAGVNTDIPITVLRNE 65 (96)
Q Consensus 8 ~~~~pa~~~~~~aGLk~GD~Il~vng~~~~~~~~~~di~~~i~~~~g~~i~l~V~R~g 65 (96)
.+++||+ +|||++||+|++|||.++.++ ++.++.++++... .++.|+|+|++
T Consensus 38 ~~~spA~----~aGL~~GD~I~~ing~~v~~~-~~~~~~~~l~~~~-~~v~l~v~R~g 89 (94)
T 1vb7_A 38 TERGKAE----AADLRPGDIIVAINGQSAENM-LHAEAQSKIRQSA-SPLRLQLDRSS 89 (94)
T ss_dssp CTTSSHH----HHTCCTTCEEEEETTEECTTC-CHHHHHHHHHTCC-SSEEEEEECCC
T ss_pred CCCCHHH----HCCCCCCCEEEEECCEECCCC-CHHHHHHHHHhCC-CcEEEEEEECC
Confidence 4789999 999999999999999886443 3588999998876 89999999998
No 28
>2uzc_A Human pdlim5, PDZ and LIM domain 5; metal-binding, enigma homolog, phosphorylation, signaling PR LIM domain, PDZ domain; 1.5A {Homo sapiens}
Probab=99.20 E-value=3.9e-11 Score=72.35 Aligned_cols=52 Identities=13% Similarity=0.273 Sum_probs=44.1
Q ss_pred CCCCCccccccccCCCCCCEEEEECCeecCCcccHHHHHHHHHhCCCceEEEEEEeCC
Q psy12583 8 SEGYPRQDVDVYQGLVKDDIILEFGPINSSNFKSLQDIASTVRAGVNTDIPITVLRNE 65 (96)
Q Consensus 8 ~~~~pa~~~~~~aGLk~GD~Il~vng~~~~~~~~~~di~~~i~~~~g~~i~l~V~R~g 65 (96)
.+++||+ +|||++||+|++|||.++.++. +.++..+++.. +.++.++|.|++
T Consensus 35 ~~~spA~----~aGl~~GD~I~~ing~~v~~~~-~~~~~~~~~~~-g~~v~l~v~R~g 86 (88)
T 2uzc_A 35 KDGGKAA----QANVRIGDVVLSIDGINAQGMT-HLEAQNKIKGC-TGSLNMTLQRES 86 (88)
T ss_dssp CTTSHHH----HTTCCTTCEEEEETTEECTTCC-HHHHHHHHHTC-CSEEEEEEECCC
T ss_pred CCCChHH----HcCCCCCCEEEEECCEECCCCC-HHHHHHHHHhC-CCeEEEEEEeCC
Confidence 4789999 9999999999999998865543 47888888765 789999999987
No 29
>2q3g_A PDZ and LIM domain protein 7; structural genomics, structural genomics consortium, SGC; 1.11A {Homo sapiens}
Probab=99.19 E-value=2.8e-11 Score=73.20 Aligned_cols=52 Identities=15% Similarity=0.241 Sum_probs=44.6
Q ss_pred CCCCCccccccccCCCCCCEEEEECCeecCCcccHHHHHHHHHhCCCceEEEEEEeCC
Q psy12583 8 SEGYPRQDVDVYQGLVKDDIILEFGPINSSNFKSLQDIASTVRAGVNTDIPITVLRNE 65 (96)
Q Consensus 8 ~~~~pa~~~~~~aGLk~GD~Il~vng~~~~~~~~~~di~~~i~~~~g~~i~l~V~R~g 65 (96)
.+++||+ +|||++||+|++|||+++.++ ++.++...++.. +.++.++|.|++
T Consensus 35 ~~~spA~----~aGl~~GD~I~~ing~~v~~~-~~~~~~~~~~~~-g~~v~l~v~R~~ 86 (89)
T 2q3g_A 35 TPGGKAA----QAGVAVGDWVLSIDGENAGSL-THIEAQNKIRAC-GERLSLGLSRAI 86 (89)
T ss_dssp CTTSHHH----HTTCCTTCEEEEETTEEGGGC-CHHHHHHHHHTC-TTEEEEEEEEEC
T ss_pred CCCCHHH----HcCCCCCCEEEEECCEECCCC-CHHHHHHHHHhC-CCEEEEEEEeCC
Confidence 4789999 999999999999999886554 678888888765 778999999987
No 30
>3rle_A Golgi reassembly-stacking protein 2; PDZ, tether, golgin, membrane protein; 1.65A {Homo sapiens} PDB: 4edj_A
Probab=99.19 E-value=6e-11 Score=82.30 Aligned_cols=77 Identities=19% Similarity=0.300 Sum_probs=58.1
Q ss_pred CCCCCccccccccCCCCC-CEEEEECCeecCCcccHHHHH-HHHHhCCCceEEEEEEeCCc-eEEEEEEeecC-CCCeee
Q psy12583 8 SEGYPRQDVDVYQGLVKD-DIILEFGPINSSNFKSLQDIA-STVRAGVNTDIPITVLRNEG-TRQRLVLRPQP-FEGQGL 83 (96)
Q Consensus 8 ~~~~pa~~~~~~aGLk~G-D~Il~vng~~~~~~~~~~di~-~~i~~~~g~~i~l~V~R~g~-~~~~l~v~p~~-~~~~~~ 83 (96)
.++|||+ +|||++| |+|++|||+++.++ .++. .+++..++.+++++|.|++. +..++++.|.. |...+.
T Consensus 24 ~~~SpA~----~AGL~~G~D~I~~ing~~v~~~---~~~~~~~~~~~~g~~v~l~v~R~~~~~~~~v~l~p~~~~~~~~~ 96 (209)
T 3rle_A 24 QENSPGH----RAGLEPFFDFIVSINGSRLNKD---NDTLKDLLKANVEKPVKMLIYSSKTLELRETSVTPSNLWGGQGL 96 (209)
T ss_dssp CTTSHHH----HTTCCTTTEEEEEETTEECCSS---SSHHHHHHHHTTTSCEEEEEEETTTCCEEEEEECCCSSSSSSSS
T ss_pred CCCCHHH----HCCCCcCCeEEEEECCEECcCH---HHHHHHHHhcCCCCEEEEEEEecCCceEEEEEEcccccccccCc
Confidence 5789999 9999999 99999999876444 4433 45566778999999999641 56677776653 445677
Q ss_pred EEEEEecc
Q psy12583 84 VGCYFLNV 91 (96)
Q Consensus 84 lGi~~~~~ 91 (96)
+|+.+.++
T Consensus 97 lGi~~~~~ 104 (209)
T 3rle_A 97 LGVSIRFC 104 (209)
T ss_dssp SCEEEEEE
T ss_pred cceEEeec
Confidence 88887743
No 31
>3sfj_A TAX1-binding protein 3; PDZ:peptide complex, signaling protein-inhibitor complex; 1.24A {Homo sapiens} PDB: 3dj3_A
Probab=99.18 E-value=4.1e-11 Score=74.28 Aligned_cols=52 Identities=19% Similarity=0.258 Sum_probs=45.7
Q ss_pred CCCCCccccccccCCCCCCEEEEECCeecCCcccHHHHHHHHHhCCCceEEEEEEeC
Q psy12583 8 SEGYPRQDVDVYQGLVKDDIILEFGPINSSNFKSLQDIASTVRAGVNTDIPITVLRN 64 (96)
Q Consensus 8 ~~~~pa~~~~~~aGLk~GD~Il~vng~~~~~~~~~~di~~~i~~~~g~~i~l~V~R~ 64 (96)
.++|||+ +|||++||+|++|||.++.+. +|+++...++...+.++.++|.|.
T Consensus 53 ~~~spA~----~aGl~~GD~I~~ing~~v~~~-~~~~~~~~l~~~~g~~v~l~v~R~ 104 (104)
T 3sfj_A 53 SEGGPAE----IAGLQIGDKIMQVNGWDMTMV-THDQARKRLTKRSEEVVRLLVTRQ 104 (104)
T ss_dssp CTTSHHH----HHTCCTTCEEEEETTEECTTC-CHHHHHHHHTCTTCSEEEEEEEEC
T ss_pred CCCChHH----HcCCCCCCEEEEECCEECCCC-CHHHHHHHHHhCCCCEEEEEEEcC
Confidence 4789999 999999999999999886554 488999999887888999999984
No 32
>2eeh_A PDZ domain-containing protein 7; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.18 E-value=3.6e-11 Score=74.34 Aligned_cols=51 Identities=18% Similarity=0.253 Sum_probs=45.1
Q ss_pred CCCCCccccccccCCCCCCEEEEECCeecCCcccHHHHHHHHHhCCCceEEEEEEeCC
Q psy12583 8 SEGYPRQDVDVYQGLVKDDIILEFGPINSSNFKSLQDIASTVRAGVNTDIPITVLRNE 65 (96)
Q Consensus 8 ~~~~pa~~~~~~aGLk~GD~Il~vng~~~~~~~~~~di~~~i~~~~g~~i~l~V~R~g 65 (96)
.+++||+ +|||++||+|++|||.++.+.. |.++...++. +.++.|+|+|++
T Consensus 44 ~~~spA~----~aGL~~GD~I~~ing~~v~~~~-~~~~~~~~~~--~~~v~l~v~R~g 94 (100)
T 2eeh_A 44 EEGSSAE----RAGLCVGDKITEVNGLSLESTT-MGSAVKVLTS--SSRLHMMVRRMG 94 (100)
T ss_dssp CTTSHHH----HHTCCSSCEEEEETTEECSSCC-HHHHHHHHHS--CSSEEEEEEECS
T ss_pred CCCCHHH----HcCCCCCCEEEEECCEECCCCC-HHHHHHhhcC--CCEEEEEEEECC
Confidence 4789999 9999999999999999877765 8888888876 689999999998
No 33
>1v5l_A PDZ and LIM domain 3; actinin alpha 2 associated LIM protein; PDZ domain, cytoskeleton, actin binding, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.17 E-value=3.9e-11 Score=74.64 Aligned_cols=54 Identities=20% Similarity=0.345 Sum_probs=46.5
Q ss_pred CCCCCccccccccCCCCCCEEEEECCeecCCcccHHHHHHHHHhCCCceEEEEEEeCCceE
Q psy12583 8 SEGYPRQDVDVYQGLVKDDIILEFGPINSSNFKSLQDIASTVRAGVNTDIPITVLRNEGTR 68 (96)
Q Consensus 8 ~~~~pa~~~~~~aGLk~GD~Il~vng~~~~~~~~~~di~~~i~~~~g~~i~l~V~R~g~~~ 68 (96)
.+++||+ +|||++||+|++|||.++.+. +|.++..+++.. +.++.|+|.|++ +.
T Consensus 37 ~~~spA~----~aGL~~GD~I~~ing~~v~~~-~~~~~~~~l~~~-g~~v~l~v~R~g-~~ 90 (103)
T 1v5l_A 37 TPGSKAA----AANLCPGDVILAIDGFGTESM-THADAQDRIKAA-SYQLCLKIDRAE-TR 90 (103)
T ss_dssp CTTSTTG----GGTCCTTCBEEEETTEECSSC-CHHHHHHHHTTC-CSEEECEECCCT-TT
T ss_pred CCCCHHH----HcCCCCCCEEEEECCEECCCC-CHHHHHHHHHhC-CCeEEEEEEECC-eE
Confidence 4789999 999999999999999775332 389999999987 889999999998 54
No 34
>2jil_A GRIP1 protein, glutamate receptor interacting protein-1; endoplasmic reticulum, postsynaptic membrane, membrane, MEMB protein; 1.5A {Homo sapiens}
Probab=99.17 E-value=2.1e-11 Score=74.73 Aligned_cols=52 Identities=13% Similarity=0.210 Sum_probs=45.5
Q ss_pred CCCCCccccccccC-CCCCCEEEEECCeecCCcccHHHHHHHHHhCCCceEEEEEEeCC
Q psy12583 8 SEGYPRQDVDVYQG-LVKDDIILEFGPINSSNFKSLQDIASTVRAGVNTDIPITVLRNE 65 (96)
Q Consensus 8 ~~~~pa~~~~~~aG-Lk~GD~Il~vng~~~~~~~~~~di~~~i~~~~g~~i~l~V~R~g 65 (96)
.+++||+ +|| |++||+|++|||.++.+. ++.++..+++. ++.++.|+|.|++
T Consensus 40 ~~~spA~----~aG~l~~GD~I~~ing~~v~~~-~~~~~~~~l~~-~g~~v~l~v~R~~ 92 (97)
T 2jil_A 40 RPGGPAD----REGTIKPGDRLLSVDGIRLLGT-THAEAMSILKQ-CGQEAALLIEYDV 92 (97)
T ss_dssp CTTSHHH----HHCCCCTTCEEEEETTEECSSC-CHHHHHHHHHH-SCSEEEEEEEEEC
T ss_pred CCCCHHH----HCCCCCCCCEEEEECCEECCCC-CHHHHHHHHHc-CCCeEEEEEEeCC
Confidence 4789999 999 999999999999875432 38899999998 7899999999987
No 35
>2eeg_A PDZ and LIM domain protein 4; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.17 E-value=5.3e-11 Score=72.81 Aligned_cols=52 Identities=10% Similarity=0.204 Sum_probs=44.3
Q ss_pred CCCCCccccccccCCCCCCEEEEECCeecCCcccHHHHHHHHHhCCCceEEEEEEeCC
Q psy12583 8 SEGYPRQDVDVYQGLVKDDIILEFGPINSSNFKSLQDIASTVRAGVNTDIPITVLRNE 65 (96)
Q Consensus 8 ~~~~pa~~~~~~aGLk~GD~Il~vng~~~~~~~~~~di~~~i~~~~g~~i~l~V~R~g 65 (96)
.+++||+ +|||++||+|++|||.++.++ ++.++...++. .+.++.|+|.|++
T Consensus 40 ~~~spA~----~aGl~~GD~I~~ing~~v~~~-~~~~~~~~~~~-~g~~v~l~v~R~g 91 (94)
T 2eeg_A 40 HAGSKAA----LAALCPGDLIQAINGESTELM-THLEAQNRIKG-CHDHLTLSVSSGP 91 (94)
T ss_dssp CSSSHHH----HTTCCTTCEEEEETTEETTTC-CHHHHHHHHHT-CCSCEEEEEECCS
T ss_pred CCCCHHH----HcCCCCCCEEEEECCEECCCC-CHHHHHHHHHc-CCCeEEEEEEeCC
Confidence 4789999 999999999999999887655 46777777776 6788999999987
No 36
>2edz_A PDZ domain-containing protein 1; CFTR-associated protein of 70 kDa, Na/PI cotransporter C- terminal-associated protein, NAPI-CAP1; NMR {Mus musculus}
Probab=99.17 E-value=4.2e-12 Score=80.40 Aligned_cols=61 Identities=20% Similarity=0.377 Sum_probs=49.8
Q ss_pred CCCCCccccccccCCCCCCEEEEECCeecCCcccHHHHHHHHHhCCCceEEEEEEeCCceEEEEEEee
Q psy12583 8 SEGYPRQDVDVYQGLVKDDIILEFGPINSSNFKSLQDIASTVRAGVNTDIPITVLRNEGTRQRLVLRP 75 (96)
Q Consensus 8 ~~~~pa~~~~~~aGLk~GD~Il~vng~~~~~~~~~~di~~~i~~~~g~~i~l~V~R~g~~~~~l~v~p 75 (96)
.+|+||+ +|||++||+|++|||.++.+ .++.++..+++.. +.++.++|.|++ +..++.+.|
T Consensus 46 ~~~spA~----~aGL~~GD~I~~ing~~v~~-~~~~~~~~~l~~~-g~~v~l~v~R~~-~~~~~~~~~ 106 (114)
T 2edz_A 46 EEGSPAE----KAGLLDGDRVLRINGVFVDK-EEHAQVVELVRKS-GNSVTLLVLDGD-SYEKAVKNQ 106 (114)
T ss_dssp CTTCTTG----GGTCCTTCEEEEESSSBCSS-SCHHHHHHHHHHT-CSEEEEEEECHH-HHHHHHHHT
T ss_pred CCCChHH----HcCCCCCCEEEEECCEECCC-CCHHHHHHHHHcC-CCEEEEEEEECC-cceehhhcC
Confidence 4789999 99999999999999977544 3478899999875 789999999988 655554444
No 37
>2yub_A LIMK-2, LIM domain kinase 2; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=99.17 E-value=1.2e-11 Score=79.42 Aligned_cols=53 Identities=17% Similarity=0.338 Sum_probs=46.3
Q ss_pred CCCccccccccCCCCCCEEEEECCeecCCcccH--HHHHHHHHhCCCceEEEEEEeCCceEEEE
Q psy12583 10 GYPRQDVDVYQGLVKDDIILEFGPINSSNFKSL--QDIASTVRAGVNTDIPITVLRNEGTRQRL 71 (96)
Q Consensus 10 ~~pa~~~~~~aGLk~GD~Il~vng~~~~~~~~~--~di~~~i~~~~g~~i~l~V~R~g~~~~~l 71 (96)
++||+ +|||++||+|++|||.+ +.+| .++..+++.. +.++.|+|+|++ +..++
T Consensus 56 ~spA~----~aGL~~GD~Il~Vng~~---v~~~~~~dl~~~l~~~-g~~v~l~v~R~g-~~~~~ 110 (118)
T 2yub_A 56 ISPNN----RNAIHPGDRILEINGTP---VRTLRVEEVEDAIKQT-SQTLQLLIEHDP-VPQRL 110 (118)
T ss_dssp SCTTH----HHHCCTTCCEEEESSSB---TTTSCHHHHHHHHHCC-SSCEEEEEEECS-SCCCC
T ss_pred CChHH----HcCCCCCCEEEEECCEE---CCCcCHHHHHHHHHhC-CCEEEEEEEECC-EEEee
Confidence 89999 99999999999999965 5666 9999999987 889999999999 65444
No 38
>1b8q_A Protein (neuronal nitric oxide synthase); PDZ domain, NNOS, nitric oxide synthase, oxidoreductase; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=99.17 E-value=2.1e-11 Score=78.33 Aligned_cols=63 Identities=19% Similarity=0.193 Sum_probs=54.8
Q ss_pred CCCCCccccccccCC-CCCCEEEEECCeecCCcccHHHHHHHHHhCCCceEEEEEEeCCceEEEEEEeec
Q psy12583 8 SEGYPRQDVDVYQGL-VKDDIILEFGPINSSNFKSLQDIASTVRAGVNTDIPITVLRNEGTRQRLVLRPQ 76 (96)
Q Consensus 8 ~~~~pa~~~~~~aGL-k~GD~Il~vng~~~~~~~~~~di~~~i~~~~g~~i~l~V~R~g~~~~~l~v~p~ 76 (96)
.+|+||+ ++|| ++||+|++|||+++.+. ++.++..+++...+.++.++|.|++ +.+.+++.+.
T Consensus 41 ~~~spA~----~aGll~~GD~I~~ing~~v~~~-~~~~~~~~l~~~~g~~v~l~v~R~g-~~~~~~~~~~ 104 (127)
T 1b8q_A 41 IRGGAAE----QSGLIQAGDIILAVNDRPLVDL-SYDSALEVLRGIASETHVVLILRGP-EGFTTHLETT 104 (127)
T ss_dssp SSSSSHH----HHSSCCTTTCCCEETTEECSSS-CHHHHHHHHHSCCSSCEEEEEECCC-CSEEECCCCC
T ss_pred CCCCHHH----HcCCCCCCCEEEEECCEECCCC-CHHHHHHHHHhCCCCeEEEEEEeCC-ceEEEEEEEE
Confidence 4789999 9999 99999999999875432 3899999999888899999999999 8888888775
No 39
>1ihj_A INAD; intermolecular disulfide bond, PDZ domain, signaling protein; 1.80A {Drosophila melanogaster} SCOP: b.36.1.1
Probab=99.16 E-value=6e-11 Score=72.80 Aligned_cols=52 Identities=17% Similarity=0.240 Sum_probs=44.1
Q ss_pred CCCCCccccccccC-CCCCCEEEEECCeecCCcccHHHHHHHHHhCCCceEEEEEEeCC
Q psy12583 8 SEGYPRQDVDVYQG-LVKDDIILEFGPINSSNFKSLQDIASTVRAGVNTDIPITVLRNE 65 (96)
Q Consensus 8 ~~~~pa~~~~~~aG-Lk~GD~Il~vng~~~~~~~~~~di~~~i~~~~g~~i~l~V~R~g 65 (96)
.+++||+ +|| |++||+|++|||.++.++ ++.++..+++. ++.++.|+|.|++
T Consensus 45 ~~~spA~----~aG~L~~GD~I~~ing~~v~~~-~~~~~~~~l~~-~g~~v~l~v~R~g 97 (98)
T 1ihj_A 45 VPDSPAH----LCGRLKVGDRILSLNGKDVRNS-TEQAVIDLIKE-ADFKIELEIQTFD 97 (98)
T ss_dssp CTTSHHH----HHCSCCTTCEEEEETTEECTTC-CHHHHHHHHHH-SCSEEEEEEEEC-
T ss_pred CCCCHHH----HcCCCCCCCEEEEECCEECCCC-CHHHHHHHHhc-CCCeEEEEEEeCC
Confidence 4789999 999 999999999999886544 35788888887 7889999999987
No 40
>1kwa_A Hcask/LIN-2 protein; PDZ domain, neurexin, syndecan, receptor clustering, kinase; 1.93A {Homo sapiens} SCOP: b.36.1.1
Probab=99.16 E-value=4.8e-11 Score=72.57 Aligned_cols=52 Identities=17% Similarity=0.164 Sum_probs=45.5
Q ss_pred CCCCCccccccc-cCCCCCCEEEEECCeecCCcccHHHHHHHHHhCCCceEEEEEEeCC
Q psy12583 8 SEGYPRQDVDVY-QGLVKDDIILEFGPINSSNFKSLQDIASTVRAGVNTDIPITVLRNE 65 (96)
Q Consensus 8 ~~~~pa~~~~~~-aGLk~GD~Il~vng~~~~~~~~~~di~~~i~~~~g~~i~l~V~R~g 65 (96)
.+|+||+ + +||++||+|++|||+++..+ +|+++.++++..++ ++.|+|.|.+
T Consensus 33 ~~gspA~----~~agL~~GD~I~~Ing~~v~~~-~~~~~~~~l~~~~~-~v~l~v~r~~ 85 (88)
T 1kwa_A 33 MHGGMIH----RQGTLHVGDEIREINGISVANQ-TVEQLQKMLREMRG-SITFKIVPSY 85 (88)
T ss_dssp CTTSHHH----HHTCCCTTCEEEEETTEEGGGS-CHHHHHHHHHHCCE-EEEEEEECCC
T ss_pred CCCCHHH----HcCCCCCCCEEEEECCEECCCC-CHHHHHHHHhcCCC-cEEEEEECCc
Confidence 4789999 9 89999999999999875332 79999999999887 9999999987
No 41
>2opg_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 1.50A {Homo sapiens}
Probab=99.14 E-value=7.7e-11 Score=72.31 Aligned_cols=55 Identities=22% Similarity=0.243 Sum_probs=45.9
Q ss_pred CCCCCccccccccC-CCCCCEEEEECCeecCCcccHHHHHHHHHhCCCceEEEEEEeCCceEE
Q psy12583 8 SEGYPRQDVDVYQG-LVKDDIILEFGPINSSNFKSLQDIASTVRAGVNTDIPITVLRNEGTRQ 69 (96)
Q Consensus 8 ~~~~pa~~~~~~aG-Lk~GD~Il~vng~~~~~~~~~~di~~~i~~~~g~~i~l~V~R~g~~~~ 69 (96)
.+++||+ +|| |++||+|++|||.++.++ ++.++..+++... .++.++|.|++ ...
T Consensus 38 ~~~spA~----~aG~l~~GD~I~~vng~~v~~~-~~~~~~~~~~~~~-~~v~l~v~R~~-~~~ 93 (98)
T 2opg_A 38 YEEGAAC----KDGRLWAGDQILEVNGIDLRKA-THDEAINVLRQTP-QRVRLTLYRDE-APY 93 (98)
T ss_dssp CTTSHHH----HHCCCCTTCEEEEETTEECTTC-CHHHHHHHHHTCC-SEEEEEEEECS-SCC
T ss_pred CCCChHH----hCCCCCCCCEEEEECCEECCCC-CHHHHHHHHHhCC-CeEEEEEEcCC-CCC
Confidence 4789999 999 999999999999886554 3778888887654 79999999988 543
No 42
>1n7e_A AMPA receptor interacting protein GRIP; PDZ, protein binding; 1.50A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1n7f_A
Probab=99.14 E-value=1e-10 Score=71.85 Aligned_cols=52 Identities=12% Similarity=0.187 Sum_probs=45.3
Q ss_pred CCCCCccccccccC-CCCCCEEEEECCeecCCcccHHHHHHHHHhCCCceEEEEEEeCC
Q psy12583 8 SEGYPRQDVDVYQG-LVKDDIILEFGPINSSNFKSLQDIASTVRAGVNTDIPITVLRNE 65 (96)
Q Consensus 8 ~~~~pa~~~~~~aG-Lk~GD~Il~vng~~~~~~~~~~di~~~i~~~~g~~i~l~V~R~g 65 (96)
.+|+||+ +|| |++||+|++|||.++.++ ++.++..+++ ..+.++.|+|.|++
T Consensus 38 ~~~spA~----~aG~l~~GD~I~~vng~~v~~~-~~~~~~~~l~-~~g~~v~l~v~R~~ 90 (97)
T 1n7e_A 38 TKGGLAE----RTGAIHIGDRILAINSSSLKGK-PLSEAIHLLQ-MAGETVTLKIKKQT 90 (97)
T ss_dssp CTTSHHH----HHTCCCTTCEEEEETTEECTTC-CHHHHHHHHH-TCCSEEEEEEECCC
T ss_pred CCCCHHH----HCCCCCCCCEEEEECCEECCCC-CHHHHHHHHH-cCCCeEEEEEEeCC
Confidence 4789999 999 999999999999886544 4788888888 57789999999988
No 43
>1um1_A KIAA1849 protein, RSGI RUH-007; PDZ domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.13 E-value=1.2e-11 Score=77.59 Aligned_cols=63 Identities=19% Similarity=0.261 Sum_probs=52.1
Q ss_pred CCCCCccccccccC-CCCCCEEEEECCeecCCcccHHHHHHHHHhCCCceEEEEEEeCCceEEEEEEeecC
Q psy12583 8 SEGYPRQDVDVYQG-LVKDDIILEFGPINSSNFKSLQDIASTVRAGVNTDIPITVLRNEGTRQRLVLRPQP 77 (96)
Q Consensus 8 ~~~~pa~~~~~~aG-Lk~GD~Il~vng~~~~~~~~~~di~~~i~~~~g~~i~l~V~R~g~~~~~l~v~p~~ 77 (96)
.+++||+ +|| |++||+|++|||.++.+ .++.++...++.. +.++.|+|.|++ +...++++|..
T Consensus 44 ~~~spA~----~aG~L~~GD~I~~vng~~v~~-~~~~~~~~~~~~~-~~~v~l~v~R~~-~~~~~~v~~~~ 107 (110)
T 1um1_A 44 LPGSPAA----ADGRLSLGDRILEVNGSSLLG-LGYLRAVDLIRHG-GKKMRFLVAKSD-VETAKKIHSGP 107 (110)
T ss_dssp CTTSHHH----HHSCCCTTCEEEEESSCBCSS-CCHHHHHHHHHTC-CSEEEEEEECCC-HHHHHHHSSCS
T ss_pred CCCChHH----HcCCCCCCCEEEEECCEECCC-CCHHHHHHHHHcC-CCeEEEEEEeCC-cceeEEEEecC
Confidence 4789999 999 99999999999977544 3577888888764 789999999999 77777777654
No 44
>2vsv_A Rhophilin-2; scaffold protein, RHO GTPase binding, protein-binding, RHOB, nitration, cytoplasm, PDZ domain, CAsp8; 1.82A {Homo sapiens}
Probab=99.13 E-value=8.8e-11 Score=74.63 Aligned_cols=53 Identities=11% Similarity=0.166 Sum_probs=45.3
Q ss_pred CCCCCccccccccCCCCCCEEEEECCeecCCcccHHHHHHHHHhCCCceEEEEEEeCC
Q psy12583 8 SEGYPRQDVDVYQGLVKDDIILEFGPINSSNFKSLQDIASTVRAGVNTDIPITVLRNE 65 (96)
Q Consensus 8 ~~~~pa~~~~~~aGLk~GD~Il~vng~~~~~~~~~~di~~~i~~~~g~~i~l~V~R~g 65 (96)
.+|+||+ +|||++||+|++|||.++..+ +|+++.++++...+++++++|.|..
T Consensus 52 ~~gspA~----~AGL~~GD~Il~VnG~~v~~~-~~~dv~~~i~~~~~~~v~l~V~~~~ 104 (109)
T 2vsv_A 52 DPYCSAS----VAGAREGDYIVSIQLVDCKWL-TLSEVMKLLKSFGEDEIEMKVVSLL 104 (109)
T ss_dssp CTTSHHH----HTTCCTTCEEEEETTEECTTC-CHHHHHHHHHTTTTSCEEEEEESCC
T ss_pred CCCCHHH----HcCCCCCCEEEEECCEECCCC-CHHHHHHHHHhCCCCeEEEEEEECC
Confidence 4789999 999999999999999875433 6789999999877778999999865
No 45
>2jxo_A Ezrin-radixin-moesin-binding phosphoprotein 50; nherf-1, PDZ domain, PDZ2, acetylation, cell projection, membrane, polymorphism; NMR {Homo sapiens}
Probab=99.12 E-value=2.3e-11 Score=74.75 Aligned_cols=53 Identities=25% Similarity=0.308 Sum_probs=45.8
Q ss_pred CCCCCccccccccCCCCCCEEEEECCeecCCcccHHHHHHHHHhCCCceEEEEEEeCC
Q psy12583 8 SEGYPRQDVDVYQGLVKDDIILEFGPINSSNFKSLQDIASTVRAGVNTDIPITVLRNE 65 (96)
Q Consensus 8 ~~~~pa~~~~~~aGLk~GD~Il~vng~~~~~~~~~~di~~~i~~~~g~~i~l~V~R~g 65 (96)
.++|||+ +|||++||+|++|||+++.+. ++.++.++++..++..+.++|.|++
T Consensus 41 ~~~spA~----~aGl~~GD~I~~ing~~v~~~-~~~~~~~~l~~~~~~~~~l~v~R~g 93 (98)
T 2jxo_A 41 DPDSPAE----ASGLRAQDRIVEVNGVCMEGK-QHGDVVSAIRAGGDETKLLVVDRET 93 (98)
T ss_dssp CTTSHHH----HHTCCTTCEEEEETTEECTTC-CHHHHHHHHHTTTTEEEEEECCHHH
T ss_pred CCCCHHH----HcCCCCCCEEEEECCEECCCC-CHHHHHHHHHhCCCcEEEEEEECCc
Confidence 4789999 999999999999999875332 3899999999888888889999976
No 46
>1uf1_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.11 E-value=3e-11 Score=77.78 Aligned_cols=62 Identities=16% Similarity=0.110 Sum_probs=50.4
Q ss_pred CCCCCccccccccCCCCCCEEEEECCeecCCcccHHHHHHHHHhCCCceEEEEEEeCCceEEEEEEeecC
Q psy12583 8 SEGYPRQDVDVYQGLVKDDIILEFGPINSSNFKSLQDIASTVRAGVNTDIPITVLRNEGTRQRLVLRPQP 77 (96)
Q Consensus 8 ~~~~pa~~~~~~aGLk~GD~Il~vng~~~~~~~~~~di~~~i~~~~g~~i~l~V~R~g~~~~~l~v~p~~ 77 (96)
.+|+||+ +|||++||+|++|||.++.++. +.++...++. +.++.|+|+|++ +..+++++|..
T Consensus 54 ~~~spA~----~aGL~~GD~I~~vng~~v~~~~-~~~~~~~~~~--~~~v~l~v~R~g-~~~~~~v~~~~ 115 (128)
T 1uf1_A 54 DPGSEAE----GSGLKVGDQILEVNGRSFLNIL-HDEAVRLLKS--SRHLILTVKDVG-RLPHARTTVDE 115 (128)
T ss_dssp CTTCHHH----HHTCCTTCEEEEETTEECSSCC-HHHHHHHHTT--CSEEEEEEECCS-CCSSCSCCCCS
T ss_pred CCCCHHH----HCCCCCCCEEEEECCEECCCCC-HHHHHHHHhc--CCeEEEEEEECC-ccccccccccc
Confidence 4789999 9999999999999998865553 3666666655 469999999999 88877777763
No 47
>2jre_A C60-1 PDZ domain peptide; de novo protein; NMR {Synthetic}
Probab=99.11 E-value=5.1e-11 Score=74.41 Aligned_cols=52 Identities=17% Similarity=0.356 Sum_probs=45.5
Q ss_pred CCCCCccccccccC-CCCCCEEEEECCeecCCcccHHHHHHHHHhCCCceEEEEEEeCC
Q psy12583 8 SEGYPRQDVDVYQG-LVKDDIILEFGPINSSNFKSLQDIASTVRAGVNTDIPITVLRNE 65 (96)
Q Consensus 8 ~~~~pa~~~~~~aG-Lk~GD~Il~vng~~~~~~~~~~di~~~i~~~~g~~i~l~V~R~g 65 (96)
.+++||+ +|| |++||+|++|||.++.++ ++.++..+++. .+.++.|+|.|++
T Consensus 52 ~~~spA~----~aG~l~~GD~I~~vng~~v~~~-~~~~~~~~l~~-~g~~v~l~v~R~~ 104 (108)
T 2jre_A 52 IPGSAAA----LDGRIEPNDKILRVDDVNVQGM-AQSDVVEVLRN-AGNPVRLLLIRRL 104 (108)
T ss_dssp CTTSHHH----HHSSCCSSEEEEEETTEECTTS-CHHHHHHHHHH-HCSEEEEEEEECC
T ss_pred CCCCHHH----HcCCCCCCCEEEEECCEECCCC-CHHHHHHHHHc-CCCeEEEEEEeCC
Confidence 4789999 999 999999999999886554 47888888887 6789999999988
No 48
>3bpu_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; structural genomi consortium, SGC, ATP-binding, cell junction; 1.60A {Homo sapiens}
Probab=99.11 E-value=2.5e-10 Score=68.84 Aligned_cols=52 Identities=19% Similarity=0.356 Sum_probs=41.8
Q ss_pred CCCCCccccccccCCCCCCEEEEECCeecCCcccHHHHHHHHHh-CCCceEEEEEEeCC
Q psy12583 8 SEGYPRQDVDVYQGLVKDDIILEFGPINSSNFKSLQDIASTVRA-GVNTDIPITVLRNE 65 (96)
Q Consensus 8 ~~~~pa~~~~~~aGLk~GD~Il~vng~~~~~~~~~~di~~~i~~-~~g~~i~l~V~R~g 65 (96)
.+++||+ |||++||+|++|||.++.++ ++.++...++. .++.++.++|.|++
T Consensus 34 v~~spA~-----aGl~~GD~I~~vng~~v~~~-~~~~~~~~l~~~~~g~~v~l~v~R~g 86 (88)
T 3bpu_A 34 IVDSPRS-----RGLKEGDLIVEVNKKNVQAL-THNQVVDMLVESPKGSEVTLLVQRQT 86 (88)
T ss_dssp CCC--CC-----TTCCTTCEEEEETTEECTTS-CHHHHHHHHHTSCTTCEEEEEEEEEC
T ss_pred ecCChhH-----hCCCCCCEEEEECCEEcCCC-CHHHHHHHHHhCCCCCEEEEEEEeCC
Confidence 3789998 69999999999999886554 36888888884 56889999999987
No 49
>1uep_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.11 E-value=9.4e-11 Score=72.89 Aligned_cols=53 Identities=15% Similarity=0.122 Sum_probs=45.8
Q ss_pred CCCCCccccccccC-CCCCCEEEEECCeecCCcccHHHHHHHHHhCC-CceEEEEEEeCC
Q psy12583 8 SEGYPRQDVDVYQG-LVKDDIILEFGPINSSNFKSLQDIASTVRAGV-NTDIPITVLRNE 65 (96)
Q Consensus 8 ~~~~pa~~~~~~aG-Lk~GD~Il~vng~~~~~~~~~~di~~~i~~~~-g~~i~l~V~R~g 65 (96)
.+++||+ +|| |++||+|++|||+++... ++.++..+++..+ +.++.|+|.|++
T Consensus 42 ~~~spA~----~aG~L~~GD~Il~ing~~v~~~-~~~~~~~~l~~~~~g~~v~l~v~R~~ 96 (103)
T 1uep_A 42 IAMGSAD----RDGRLHPGDELVYVDGIPVAGK-THRYVIDLMHHAARNGQVNLTVRRKV 96 (103)
T ss_dssp CTTSTTG----GGTCCCTTCEEEEETTEECTTS-CHHHHHHHHHHHHHHTEEEEEEEEEC
T ss_pred CCCChHH----hCCCCCCCCEEEEECCEECCCC-CHHHHHHHHHhCCCCCcEEEEEEeCC
Confidence 3789999 999 999999999999886443 6889999998765 789999999987
No 50
>3khf_A Microtubule-associated serine/threonine-protein kinase 3; MAST3, microtubule associated serine/threonine kinase 3, PDZ domain, structural genomics; 1.20A {Homo sapiens} PDB: 2w7r_A 2kqf_A 2kyl_A 3ps4_A
Probab=99.11 E-value=9.9e-11 Score=72.03 Aligned_cols=52 Identities=19% Similarity=0.246 Sum_probs=44.8
Q ss_pred CCCCCccccccccCCCCCCEEEEECCeecCCcccHHHHHHHHHhCCCceEEEEEEeCC
Q psy12583 8 SEGYPRQDVDVYQGLVKDDIILEFGPINSSNFKSLQDIASTVRAGVNTDIPITVLRNE 65 (96)
Q Consensus 8 ~~~~pa~~~~~~aGLk~GD~Il~vng~~~~~~~~~~di~~~i~~~~g~~i~l~V~R~g 65 (96)
.+++||+ +|||++||+|++|||.++.+. +|.++..+++ .++..+.++|.|++
T Consensus 42 ~~~spA~----~aGl~~GD~I~~ing~~v~~~-~~~~~~~~l~-~~g~~v~l~v~r~~ 93 (99)
T 3khf_A 42 EDGSPAQ----EAGLRAGDLITHINGESVLGL-VHMDVVELLL-KSGNKISLRTTALE 93 (99)
T ss_dssp CTTSHHH----HHTCCTTCEEEEETTEECTTC-CHHHHHHHHH-HSCSEEEEEEECSC
T ss_pred CCCCHHH----HcCCCCCCEEEEECCEECCCC-CHHHHHHHHh-cCCCEEEEEEEECC
Confidence 4789999 999999999999999875432 7888988888 46789999999987
No 51
>2i04_A Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1; PDZ, E6 binding, tumor suppressor, peptide binding protein; 2.15A {Mus musculus}
Probab=99.11 E-value=1.4e-10 Score=69.38 Aligned_cols=51 Identities=10% Similarity=0.179 Sum_probs=43.1
Q ss_pred CCCCCccccccccC-CCCCCEEEEECCeecCCcccHHHHHHHHHhCC-CceEEEEEEe
Q psy12583 8 SEGYPRQDVDVYQG-LVKDDIILEFGPINSSNFKSLQDIASTVRAGV-NTDIPITVLR 63 (96)
Q Consensus 8 ~~~~pa~~~~~~aG-Lk~GD~Il~vng~~~~~~~~~~di~~~i~~~~-g~~i~l~V~R 63 (96)
.+++||+ ++| |++||+|++|||.++.++ ++.++.++++..+ +.++.++|.|
T Consensus 33 ~~~spA~----~aG~l~~GD~I~~vng~~v~~~-~~~~~~~~l~~~~~g~~v~l~v~R 85 (85)
T 2i04_A 33 VLDGPAA----LDGKMETGDVIVSVNDTCVLGH-THAQVVKIFQSIPIGASVDLELCR 85 (85)
T ss_dssp CTTSHHH----HHCCCCTTCEEEEETTEECTTC-CHHHHHHHHHTSCTTCEEEEEEEC
T ss_pred CCCChHH----HcCCCCCCCEEEEECCEECCCC-CHHHHHHHHHhCCCCCeEEEEEEC
Confidence 4789999 999 999999999999876443 5788889998764 7889999876
No 52
>1lcy_A HTRA2 serine protease; apoptosis, PDZ domain, caspase activation, binding, hydrolase; 2.00A {Homo sapiens} SCOP: b.36.1.4 b.47.1.1
Probab=99.11 E-value=1.4e-10 Score=85.10 Aligned_cols=59 Identities=24% Similarity=0.446 Sum_probs=52.5
Q ss_pred CCCCCccccccccCCCCCCEEEEECCeecCCcccHHHHHHHHHhCCCceEEEEEEeCCceEEEEEEeec
Q psy12583 8 SEGYPRQDVDVYQGLVKDDIILEFGPINSSNFKSLQDIASTVRAGVNTDIPITVLRNEGTRQRLVLRPQ 76 (96)
Q Consensus 8 ~~~~pa~~~~~~aGLk~GD~Il~vng~~~~~~~~~~di~~~i~~~~g~~i~l~V~R~g~~~~~l~v~p~ 76 (96)
.++|||+ +|||++||+|++|||.+ +.+|.++.++++. ++++.|+|+|++ +.++++++|.
T Consensus 264 ~~~spA~----~aGl~~GDvI~~ing~~---v~~~~~l~~~l~~--~~~v~l~v~R~g-~~~~~~v~~~ 322 (325)
T 1lcy_A 264 ILGSPAH----RAGLRPGDVILAIGEQM---VQNAEDVYEAVRT--QSQLAVQIRRGR-ETLTLYVTPE 322 (325)
T ss_dssp CTTSHHH----HHTCCTTCEEEEETTEE---CCSHHHHHHHHTT--CSSEEEEEEETT-EEEEEEECCE
T ss_pred CcCChHH----HCCCCCCCEEEEECCEE---cCCHHHHHHHHhC--CCeEEEEEEECC-EEEEEEEEEe
Confidence 4789999 99999999999999966 5788999999886 579999999999 9999988875
No 53
>2f5y_A Regulator of G-protein signalling 3 isoform 1; PDZ domain, RGS-3, human, structural genomics, structural GE consortium, SGC, signaling protein; 2.39A {Homo sapiens} SCOP: b.36.1.1
Probab=99.11 E-value=1.7e-10 Score=70.11 Aligned_cols=52 Identities=21% Similarity=0.342 Sum_probs=44.0
Q ss_pred CCCCCccccccccCCCCCCEEEEECCeecCCcccHHHHHHHHHhCCCceEEEEEEeCC
Q psy12583 8 SEGYPRQDVDVYQGLVKDDIILEFGPINSSNFKSLQDIASTVRAGVNTDIPITVLRNE 65 (96)
Q Consensus 8 ~~~~pa~~~~~~aGLk~GD~Il~vng~~~~~~~~~~di~~~i~~~~g~~i~l~V~R~g 65 (96)
.+|+||+ +|||++||+|++|||.++.++ ++.++..+++.. +..+.++|.|++
T Consensus 32 ~~~spA~----~aGl~~GD~I~~vng~~v~~~-~~~~~~~~l~~~-~~~v~l~v~R~~ 83 (91)
T 2f5y_A 32 DSGGPAE----RAGLQQLDTVLQLNERPVEHW-KCVELAHEIRSC-PSEIILLVWRMV 83 (91)
T ss_dssp CTTSHHH----HHTCCTTCEEEEETTEECTTC-CHHHHHHHHHTC-SSEEEEEEEECC
T ss_pred CCCCHHH----HcCCCCCCEEEEECCEECCCC-CHHHHHHHHHcC-CCeEEEEEEeCC
Confidence 4789999 999999999999999886543 578888888864 458999999988
No 54
>2rcz_A Tight junction protein ZO-1; PDZ, domain-swapping, cell junction, membrane, phosphorylati domain, protein binding; 1.70A {Homo sapiens} PDB: 2jwe_A 2osg_A
Probab=99.11 E-value=1.3e-10 Score=68.50 Aligned_cols=52 Identities=21% Similarity=0.366 Sum_probs=42.3
Q ss_pred CCCCCccccccccC-CCCCCEEEEECCeecCCcccHHHHHHHHHhCCCceEEEEEEeCC
Q psy12583 8 SEGYPRQDVDVYQG-LVKDDIILEFGPINSSNFKSLQDIASTVRAGVNTDIPITVLRNE 65 (96)
Q Consensus 8 ~~~~pa~~~~~~aG-Lk~GD~Il~vng~~~~~~~~~~di~~~i~~~~g~~i~l~V~R~g 65 (96)
.+++||+ ++| |++||+|++|||.++... +|.++..+++...+ ++.++|.|++
T Consensus 29 ~~~s~A~----~aG~l~~GD~I~~ing~~v~~~-~~~~~~~~l~~~~~-~v~l~v~R~g 81 (81)
T 2rcz_A 29 SQDSLAA----RDGNIQEGDVVLKINGTVTENM-SLTDAKTLIERSKG-KLKMVVQRDE 81 (81)
T ss_dssp CTTSHHH----HHSSCCTTCEEEEETTEECTTC-CHHHHHHHHHTSTT-EEEEEEEC--
T ss_pred CCCChHH----HCCCCCCCCEEEEECCEECCCC-CHHHHHHHHHCCCC-eEEEEEEeCC
Confidence 4789999 999 999999999999775322 78899999987654 8999999975
No 55
>4amh_A Disks large homolog 1; permutation, protein folding, structural protein; 2.30A {Homo sapiens}
Probab=99.11 E-value=3.2e-10 Score=71.03 Aligned_cols=52 Identities=13% Similarity=0.203 Sum_probs=44.4
Q ss_pred CCCCCccccccccC-CCCCCEEEEECCeecCCcccHHHHHHHHHhCCCceEEEEEEeCC
Q psy12583 8 SEGYPRQDVDVYQG-LVKDDIILEFGPINSSNFKSLQDIASTVRAGVNTDIPITVLRNE 65 (96)
Q Consensus 8 ~~~~pa~~~~~~aG-Lk~GD~Il~vng~~~~~~~~~~di~~~i~~~~g~~i~l~V~R~g 65 (96)
.+|+||+ ++| |++||+|++|||.++.+ .+|.++..+++.. +.++.|+|.|++
T Consensus 40 ~~gspA~----~aG~L~~GD~Il~Vng~~v~~-~~~~~~~~~l~~~-~~~v~l~v~R~~ 92 (106)
T 4amh_A 40 IEGGAAH----KDGKLQIGDKLLAVNNVALEE-VTHEEAVTALKNT-SDFVYLKVAKPG 92 (106)
T ss_dssp CTTSHHH----HHCCCCTTCEEEEETTEECSS-CCHHHHHHHHHSC-CSEEEEEEECCS
T ss_pred CCCCHHH----HCCCCCCCCEEEEECCEECCC-CCHHHHHHHHhCC-CCeEEEEEEeCC
Confidence 5789999 999 99999999999988654 4678888888765 569999999987
No 56
>1d5g_A Human phosphatase HPTP1E; protein-peptide complex, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 3lnx_A 3lny_A 3pdz_A 1vj6_A 1gm1_A 1ozi_A
Probab=99.11 E-value=1.7e-10 Score=70.55 Aligned_cols=52 Identities=12% Similarity=0.177 Sum_probs=45.0
Q ss_pred CCCCCccccccccC-CCCCCEEEEECCeecCCcccHHHHHHHHHhCCCceEEEEEEeCC
Q psy12583 8 SEGYPRQDVDVYQG-LVKDDIILEFGPINSSNFKSLQDIASTVRAGVNTDIPITVLRNE 65 (96)
Q Consensus 8 ~~~~pa~~~~~~aG-Lk~GD~Il~vng~~~~~~~~~~di~~~i~~~~g~~i~l~V~R~g 65 (96)
.+++||+ +|| |++||+|++|||.++.++ ++.++..+++. .+.++.|+|.|++
T Consensus 41 ~~~spA~----~aG~l~~GD~I~~vng~~v~~~-~~~~~~~~l~~-~g~~v~l~v~R~~ 93 (96)
T 1d5g_A 41 IPQGAAE----SDGRIHKGDRVLAVNGVSLEGA-THKQAVETLRN-TGQVVHLLLEKGQ 93 (96)
T ss_dssp CTTSHHH----HTTCCCTTCEEEEETTEECTTC-CHHHHHHHHHS-CCSEEEEEEECCS
T ss_pred CCCChHH----HcCCCCCCCEEEEECCEECCCC-CHHHHHHHHHc-CCCeEEEEEEcCC
Confidence 4789999 999 999999999999886554 67888888887 5789999999986
No 57
>1w9e_A Syntenin 1; cell adhesion, adhesion/complex, PDZ domain, scaffolding protein signaling protein; 1.56A {Homo sapiens} SCOP: b.36.1.1 b.36.1.1 PDB: 1n99_A 1v1t_A 1obz_A 1w9o_A 1w9q_A 1ybo_A
Probab=99.11 E-value=1.2e-10 Score=77.67 Aligned_cols=73 Identities=18% Similarity=0.318 Sum_probs=53.1
Q ss_pred CCCCCccccccccCCCCCCEEEEECCeecCCcccHHHHHHHHHhCCCceEEEEEEeCCceEEEEEEeecCCCCeeeEEEE
Q psy12583 8 SEGYPRQDVDVYQGLVKDDIILEFGPINSSNFKSLQDIASTVRAGVNTDIPITVLRNEGTRQRLVLRPQPFEGQGLVGCY 87 (96)
Q Consensus 8 ~~~~pa~~~~~~aGLk~GD~Il~vng~~~~~~~~~~di~~~i~~~~g~~i~l~V~R~g~~~~~l~v~p~~~~~~~~lGi~ 87 (96)
.+||||+ +|||++||+|++|||.++.++.. .....+++..++.++.++|.|++ +.+++++.+.. ...+|+.
T Consensus 35 ~~~spA~----~aGl~~GD~I~~ing~~v~~~~~-~~~~~~~~~~~~~~v~l~vr~~~-~~~~v~l~~~~---~~~lG~~ 105 (166)
T 1w9e_A 35 QANSPAS----LVGLRFGDQVLQINGENCAGWSS-DKAHKVLKQAFGEKITMTIRDRP-FERTITMHKDS---TGHVGFI 105 (166)
T ss_dssp CTTSHHH----HTTCCTTCEEEEETTEECTTCCH-HHHHHHHHHCCSSEEEEEEECCT-TCEEEEEECCT---TSCCSEE
T ss_pred CCCChHH----HcCCCCCCEEEEECCEECCCCCH-HHHHHHHhcCCCCEEEEEEEcCC-CcEEEEEecCC---CCcEeEE
Confidence 4789999 99999999999999987544422 12346666777889999997776 77778877532 2346765
Q ss_pred Ee
Q psy12583 88 FL 89 (96)
Q Consensus 88 ~~ 89 (96)
+.
T Consensus 106 ~~ 107 (166)
T 1w9e_A 106 FK 107 (166)
T ss_dssp EE
T ss_pred Ee
Confidence 53
No 58
>2kv8_A RGS12, regulator of G-protein signaling 12; PDZ domain, signaling protein; NMR {Homo sapiens}
Probab=99.11 E-value=3e-10 Score=67.78 Aligned_cols=52 Identities=19% Similarity=0.309 Sum_probs=42.5
Q ss_pred CCCCCccccccccCCCCCCEEEEECCeecCCcccHHHHHHHHHhCCCceEEEEEEeCC
Q psy12583 8 SEGYPRQDVDVYQGLVKDDIILEFGPINSSNFKSLQDIASTVRAGVNTDIPITVLRNE 65 (96)
Q Consensus 8 ~~~~pa~~~~~~aGLk~GD~Il~vng~~~~~~~~~~di~~~i~~~~g~~i~l~V~R~g 65 (96)
.+++||+ +|||++||+|++|||.++.++. +.++..+++.. +..+.++|.|+.
T Consensus 31 ~~~spA~----~aGl~~GD~I~~ing~~v~~~~-~~~~~~~l~~~-~~~v~l~v~R~~ 82 (83)
T 2kv8_A 31 MRGSPAD----FVGLRAGDQILAVNEINVKKAS-HEDVVKLIGKC-SGVLHMVIAEGV 82 (83)
T ss_dssp CTTSTTT----TTTCCTTCEEEEETTEECSSCC-HHHHHHHHTTC-SSCEEEEEECCC
T ss_pred CCCChHH----HcCCCCCCEEEEECCEECCCCC-HHHHHHHHHhC-CCeEEEEEEcCC
Confidence 4789999 9999999999999998865443 47888888765 467999999964
No 59
>2d90_A PDZ domain containing protein 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=99.11 E-value=1.9e-10 Score=71.21 Aligned_cols=52 Identities=17% Similarity=0.347 Sum_probs=44.3
Q ss_pred CCCCCccccccccCCCCCCEEEEECCeecCCcccHHHHHHHHHhCCCceEEEEEEeCC
Q psy12583 8 SEGYPRQDVDVYQGLVKDDIILEFGPINSSNFKSLQDIASTVRAGVNTDIPITVLRNE 65 (96)
Q Consensus 8 ~~~~pa~~~~~~aGLk~GD~Il~vng~~~~~~~~~~di~~~i~~~~g~~i~l~V~R~g 65 (96)
.+++||+ +|||++||+|++|||.++.+. ++.++..+++. .+.++.++|.|++
T Consensus 38 ~~~spA~----~aGl~~GD~I~~ing~~v~~~-~~~~~~~~l~~-~g~~v~l~v~r~~ 89 (102)
T 2d90_A 38 EPGSPAE----AAGLKNNDLVVAVNGKSVEAL-DHDGVVEMIRK-GGDQTTLLVLDKE 89 (102)
T ss_dssp CTTSTTT----TTTCCTTCEEEEESSCBCTTS-CHHHHHHHHHH-STTEEEEEECSTT
T ss_pred CCCCHHH----HcCCCCCCEEEEECCEECCCC-CHHHHHHHHHc-CCCEEEEEEEECC
Confidence 4789999 999999999999999876554 37888888887 4779999999876
No 60
>1rgw_A ZAsp protein; PDZ, cypher, oracle, muscle, Z-DISK, sarcomere, structural protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 1wjl_A
Probab=99.10 E-value=1.3e-10 Score=69.53 Aligned_cols=52 Identities=10% Similarity=0.335 Sum_probs=43.0
Q ss_pred CCCCCccccccccCCCCCCEEEEECCeecCCcccHHHHHHHHHhCCCceEEEEEEeCC
Q psy12583 8 SEGYPRQDVDVYQGLVKDDIILEFGPINSSNFKSLQDIASTVRAGVNTDIPITVLRNE 65 (96)
Q Consensus 8 ~~~~pa~~~~~~aGLk~GD~Il~vng~~~~~~~~~~di~~~i~~~~g~~i~l~V~R~g 65 (96)
.+++||+ +|||++||+|++|||.++.++ ++.++...++.. +.++.++|.|++
T Consensus 33 ~~~spA~----~aGl~~GD~I~~vng~~v~~~-~~~~~~~~~~~~-~~~v~l~v~R~~ 84 (85)
T 1rgw_A 33 TPGSKAA----QSQLSQGDLVVAIDGVNTDTM-THLEAQNKIKSA-SYNLSLTLQKSK 84 (85)
T ss_dssp CTTSHHH----HSSCCCCSBEEEETTEECTTC-CHHHHHHHHTTC-SSCEEEEEESCC
T ss_pred CCCCHHH----HcCCCCCCEEEEECCEECCCc-CHHHHHHHHHcC-CCeEEEEEEeCC
Confidence 4789999 999999999999999886554 457777777754 457999999986
No 61
>2g5m_B Neurabin-2; spinophilin, PDZ domain, CNS, synaptic transmission, protein binding; NMR {Rattus norvegicus}
Probab=99.10 E-value=2.1e-11 Score=76.79 Aligned_cols=62 Identities=15% Similarity=0.201 Sum_probs=52.1
Q ss_pred CCCCCccccccccC-CCCCCEEEEECCeecCCcccHHHHHHHHHhCCCceEEEEEEeCCceEEEEEEeec
Q psy12583 8 SEGYPRQDVDVYQG-LVKDDIILEFGPINSSNFKSLQDIASTVRAGVNTDIPITVLRNEGTRQRLVLRPQ 76 (96)
Q Consensus 8 ~~~~pa~~~~~~aG-Lk~GD~Il~vng~~~~~~~~~~di~~~i~~~~g~~i~l~V~R~g~~~~~l~v~p~ 76 (96)
.+++||+ +|| |++||+|++|||.++.+. ++.++..+++.. +.++.|+|.|++ ...++++.|.
T Consensus 43 ~~~s~A~----~aG~l~~GD~I~~vng~~v~~~-~~~~~~~~~~~~-g~~v~l~v~R~~-~~~~~~v~p~ 105 (113)
T 2g5m_B 43 TEGGAAH----RDGRIQVNDLLVEVDGTSLVGV-TQSFAASVLRNT-KGRVRFMIGRER-PGEQSEVAQL 105 (113)
T ss_dssp CTTSHHH----HHTCSCTTCBEEEETTEECSSC-CHHHHHHHHHHS-CSSCEEEEEECC-CCTTSSCSSC
T ss_pred CCCCHHH----HcCCCCCCCEEEEECCEECCCC-CHHHHHHHHhcC-CCeEEEEEEeCC-CCCcchhhhh
Confidence 4789999 999 999999999999886554 477888888875 789999999999 7777777665
No 62
>4a8c_A Periplasmic PH-dependent serine endoprotease DEGQ; chaperone, hydrolase; 7.50A {Escherichia coli} PDB: 4a8a_A 4a8b_A 4a9g_A
Probab=99.10 E-value=2.9e-10 Score=86.55 Aligned_cols=62 Identities=23% Similarity=0.373 Sum_probs=55.3
Q ss_pred CCCCCccccccccCCCCCCEEEEECCeecCCcccHHHHHHHHHhCCCceEEEEEEeCCceEEEEEEeecCC
Q psy12583 8 SEGYPRQDVDVYQGLVKDDIILEFGPINSSNFKSLQDIASTVRAGVNTDIPITVLRNEGTRQRLVLRPQPF 78 (96)
Q Consensus 8 ~~~~pa~~~~~~aGLk~GD~Il~vng~~~~~~~~~~di~~~i~~~~g~~i~l~V~R~g~~~~~l~v~p~~~ 78 (96)
.+++||+ ++||++||+|++|||++ +.+|+++.++++.+++ ++.|+|+|++ +.+.+.+.|.+|
T Consensus 371 ~~~spA~----~aGL~~GD~I~~vng~~---v~~~~~~~~~l~~~~~-~v~l~v~R~g-~~~~~~~~~~~~ 432 (436)
T 4a8c_A 371 VKGSPAA----QAGLQKDDVIIGVNRDR---VNSIAEMRKVLAAKPA-IIALQIVRGN-ESIYLLMRLEHH 432 (436)
T ss_pred CCCCHHH----HcCCCCCCEEEEECCEE---CCCHHHHHHHHHhCCC-eEEEEEEECC-EEEEEEEEeccc
Confidence 4689999 99999999999999966 5789999999998654 8999999999 999999999874
No 63
>2dls_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; PDZ domain, arhgef11, KIAA0380, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2omj_A 2os6_A
Probab=99.10 E-value=2.6e-10 Score=69.65 Aligned_cols=51 Identities=14% Similarity=0.229 Sum_probs=42.0
Q ss_pred CCCCCccccccccCCCCCCEEEEECCeecCCcccHHHHHHHHHhCCCceEEEEEEeCC
Q psy12583 8 SEGYPRQDVDVYQGLVKDDIILEFGPINSSNFKSLQDIASTVRAGVNTDIPITVLRNE 65 (96)
Q Consensus 8 ~~~~pa~~~~~~aGLk~GD~Il~vng~~~~~~~~~~di~~~i~~~~g~~i~l~V~R~g 65 (96)
.+++||+ +|||++||+|++|||+++.+... .++...++ .+.++.|+|.|++
T Consensus 37 ~~~spA~----~aGL~~GD~I~~ing~~v~~~~~-~~~~~~~~--~g~~v~l~v~R~~ 87 (93)
T 2dls_A 37 RPGGAAM----KAGVKEGDRIIKVNGTMVTNSSH-LEVVKLIK--SGAYVALTLLGSS 87 (93)
T ss_dssp CSSSTTT----TTTCCSSCEEEEETTEECSSSCH-HHHHHHHT--SSSEEEEEEECCC
T ss_pred CCCCHHH----HcCCCCCCEEEEECCEECCCCCH-HHHHHhhc--CCCEEEEEEEECC
Confidence 4789999 99999999999999988766543 35656665 5789999999986
No 64
>1x5q_A LAP4 protein; PDZ domain, scribble homolog protein, hscrib, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.10 E-value=1.2e-10 Score=73.07 Aligned_cols=54 Identities=20% Similarity=0.287 Sum_probs=43.6
Q ss_pred CCCCCccccccccCCCCCCEEEEECCeecCCcccHHHHHHHHHhCCCceEEEEEEeCCceE
Q psy12583 8 SEGYPRQDVDVYQGLVKDDIILEFGPINSSNFKSLQDIASTVRAGVNTDIPITVLRNEGTR 68 (96)
Q Consensus 8 ~~~~pa~~~~~~aGLk~GD~Il~vng~~~~~~~~~~di~~~i~~~~g~~i~l~V~R~g~~~ 68 (96)
.+++||+ +|||++||+|++|||+++.+.. +.+....++. ++.++.|+|+|++ +.
T Consensus 54 ~~~spA~----~aGL~~GD~I~~ing~~v~~~~-~~~~~~~~~~-~g~~v~l~v~R~g-~~ 107 (110)
T 1x5q_A 54 SEEGPAA----RAGVRVGDKLLEVNGVALQGAE-HHEAVEALRG-AGTAVQMRVWRES-GP 107 (110)
T ss_dssp CTTSHHH----HHTCCTTCEEEEETTEECTTCC-HHHHHHHHHS-CCSEEEEEEEECS-SC
T ss_pred CCCCHHH----HcCCCCCCEEEEECCEECCCcC-HHHHHHHhhC-CCCeEEEEEEECC-cc
Confidence 4789999 9999999999999998866553 4445555555 7889999999998 54
No 65
>3qo6_A Protease DO-like 1, chloroplastic; protease, HTRA, PH-sensor, hydrolase, photosynthesis; 2.50A {Arabidopsis thaliana}
Probab=99.09 E-value=1.1e-10 Score=86.46 Aligned_cols=62 Identities=19% Similarity=0.360 Sum_probs=54.3
Q ss_pred CCCCCccccccccCCCC-----------CCEEEEECCeecCCcccHHHHHHHHHh-CCCceEEEEEEeCCceEEEEEEee
Q psy12583 8 SEGYPRQDVDVYQGLVK-----------DDIILEFGPINSSNFKSLQDIASTVRA-GVNTDIPITVLRNEGTRQRLVLRP 75 (96)
Q Consensus 8 ~~~~pa~~~~~~aGLk~-----------GD~Il~vng~~~~~~~~~~di~~~i~~-~~g~~i~l~V~R~g~~~~~l~v~p 75 (96)
.+++||+ +|||++ ||+|++|||++ +.+|+++..++.. .+|.+++|+|+|++ +.+++++++
T Consensus 259 ~~~spA~----~AGl~~~~~~~~~~l~~GDvI~~ing~~---v~~~~dl~~~l~~~~~g~~v~l~v~R~g-~~~~~~v~l 330 (348)
T 3qo6_A 259 PPSGPAG----KAGLQSTKRDGYGRLVLGDIITSVNGTK---VSNGSDLYRILDQCKVGDEVTVEVLRGD-HKEKISVTL 330 (348)
T ss_dssp CSSSHHH----HHTCCCCEECSSSCEECCCEECEETTBC---CSSSHHHHHHHTTCCTTCEEEEEEECSS-SEEEEEEEC
T ss_pred cCCChHH----HcCCccccccccCCCCCCCEEEEECCEE---eCCHHHHHHHHHhCCCcCEEEEEEEECC-EEEEEEEEE
Confidence 5789999 999999 99999999955 6788999999965 46899999999999 988888887
Q ss_pred cC
Q psy12583 76 QP 77 (96)
Q Consensus 76 ~~ 77 (96)
..
T Consensus 331 ~~ 332 (348)
T 3qo6_A 331 EP 332 (348)
T ss_dssp EE
T ss_pred cc
Confidence 64
No 66
>2he4_A Na(+)/H(+) exchange regulatory cofactor NHE-RF2; phosphorylation, structural genomics, structural genomics consortium, SGC, unknown function; 1.45A {Homo sapiens} PDB: 2ozf_A
Probab=99.09 E-value=1.2e-10 Score=70.55 Aligned_cols=52 Identities=17% Similarity=0.342 Sum_probs=44.5
Q ss_pred CCCCCccccccccCCCCCCEEEEECCeecCCcccHHHHHHHHHhCCCceEEEEEEeCC
Q psy12583 8 SEGYPRQDVDVYQGLVKDDIILEFGPINSSNFKSLQDIASTVRAGVNTDIPITVLRNE 65 (96)
Q Consensus 8 ~~~~pa~~~~~~aGLk~GD~Il~vng~~~~~~~~~~di~~~i~~~~g~~i~l~V~R~g 65 (96)
.+++||+ +|||++||+|++|||.++.++ ++.++..+++.. +.++.|+|.|.+
T Consensus 36 ~~~spA~----~aGl~~GD~I~~ing~~v~~~-~~~~~~~~l~~~-~~~v~l~v~r~~ 87 (90)
T 2he4_A 36 DPGSPAA----RSGLRAQDRLIEVNGQNVEGL-RHAEVVASIKAR-EDEARLLVVGPS 87 (90)
T ss_dssp CTTSHHH----HHTCCTTCEEEEETTEECTTS-CHHHHHHHHTTS-SSEEEEEEECCC
T ss_pred CCCChHH----HCCCCCCCEEEEECCEECCCC-CHHHHHHHHHcC-CCcEEEEEEccC
Confidence 4789999 999999999999999875443 248899999876 789999999987
No 67
>1uew_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.09 E-value=1.9e-10 Score=72.61 Aligned_cols=52 Identities=19% Similarity=0.305 Sum_probs=45.1
Q ss_pred CCCCCccccccc-cCCCCCCEEEEECCeecCCcccHHHHHHHHHhCCCceEEEEEEeCC
Q psy12583 8 SEGYPRQDVDVY-QGLVKDDIILEFGPINSSNFKSLQDIASTVRAGVNTDIPITVLRNE 65 (96)
Q Consensus 8 ~~~~pa~~~~~~-aGLk~GD~Il~vng~~~~~~~~~~di~~~i~~~~g~~i~l~V~R~g 65 (96)
.+++||+ + |||++||+|++|||+++.++ .|.++.++++. .+..+.|+|.|++
T Consensus 51 ~~~spA~----~~agL~~GD~I~~ing~~v~~~-~~~~~~~~l~~-~g~~v~l~v~r~~ 103 (114)
T 1uew_A 51 IDGSPAD----RCAKLKVGDRILAVNGQSIINM-PHADIVKLIKD-AGLSVTLRIIPQE 103 (114)
T ss_dssp CTTCTTG----GGSSCCTTCBEEEETTBCTTTS-CHHHHHHHHHH-TTTEEEEEECCCS
T ss_pred CCCChHH----HhCCCCCCCEEEEECCEECCCC-CHHHHHHHHHc-CCCeEEEEEEeCC
Confidence 4789999 9 99999999999999775332 37899999998 7889999999988
No 68
>2o2t_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 2.70A {Homo sapiens}
Probab=99.09 E-value=4e-11 Score=75.97 Aligned_cols=55 Identities=18% Similarity=0.228 Sum_probs=46.6
Q ss_pred CCCCCccccccccC-CCCCCEEEEECCeecCCcccHHHHHHHHHhCCCceEEEEEEeCCceE
Q psy12583 8 SEGYPRQDVDVYQG-LVKDDIILEFGPINSSNFKSLQDIASTVRAGVNTDIPITVLRNEGTR 68 (96)
Q Consensus 8 ~~~~pa~~~~~~aG-Lk~GD~Il~vng~~~~~~~~~~di~~~i~~~~g~~i~l~V~R~g~~~ 68 (96)
.+++||+ ++| |++||+|++|||.++....+|.++..+++. .+..+.|+|.|++ +.
T Consensus 57 ~~~spA~----~aG~l~~GD~Il~ing~~v~~~~~~~~~~~~l~~-~~~~v~l~v~R~~-~~ 112 (117)
T 2o2t_A 57 QEGSVAH----RDGRLKETDQILAINGQALDQTITHQQAISILQK-AKDTVQLVIARGS-LP 112 (117)
T ss_dssp CTTSHHH----HHCCCCTTCEEEEETTEECCTTSCHHHHHHHHHH-CCSEEEEEEESSC-CG
T ss_pred CCCCHHH----HCCCCCCCCEEEEECCEECCCCCCHHHHHHHHHc-CCCEEEEEEEeCC-cc
Confidence 4789999 999 999999999999885422378999999987 5789999999998 54
No 69
>1whd_A RGS3, regulator of G-protein signaling 3; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.09 E-value=2e-10 Score=71.10 Aligned_cols=52 Identities=21% Similarity=0.346 Sum_probs=43.8
Q ss_pred CCCCCccccccccCCCCCCEEEEECCeecCCcccHHHHHHHHHhCCCceEEEEEEeCC
Q psy12583 8 SEGYPRQDVDVYQGLVKDDIILEFGPINSSNFKSLQDIASTVRAGVNTDIPITVLRNE 65 (96)
Q Consensus 8 ~~~~pa~~~~~~aGLk~GD~Il~vng~~~~~~~~~~di~~~i~~~~g~~i~l~V~R~g 65 (96)
.+++||+ +|||++||+|++|||.++.++ ++.++..+++...+ .+.|+|+|++
T Consensus 44 ~~~spA~----~aGL~~GD~I~~vng~~v~~~-~~~~~~~~l~~~~~-~v~l~v~R~~ 95 (100)
T 1whd_A 44 DSGGPAE----RAGLQQLDTVLQLNERPVEHW-KCVELAHEIRSCPS-EIILLVWRVS 95 (100)
T ss_dssp CTTSHHH----HHTCCSSCEEEEETTEECTTC-CHHHHHHHHHHCSS-EEEEEEEECC
T ss_pred CCCCHHH----HcCCCCCCEEEEECCEECCCC-CHHHHHHHHHcCCC-eEEEEEEECC
Confidence 4789999 999999999999999876443 57888889987654 5999999976
No 70
>2iwo_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP-1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.7A {Homo sapiens} PDB: 2iwp_A
Probab=99.09 E-value=4.9e-11 Score=76.54 Aligned_cols=55 Identities=9% Similarity=0.060 Sum_probs=46.4
Q ss_pred CCCCCcccccccc-CCCCCCEEEEECCeecCCcccHHHHHHHHHhCCCceEEEEEEeCCceEE
Q psy12583 8 SEGYPRQDVDVYQ-GLVKDDIILEFGPINSSNFKSLQDIASTVRAGVNTDIPITVLRNEGTRQ 69 (96)
Q Consensus 8 ~~~~pa~~~~~~a-GLk~GD~Il~vng~~~~~~~~~~di~~~i~~~~g~~i~l~V~R~g~~~~ 69 (96)
.+++||+ ++ ||++||+|++|||.++.++ ++.++..+++... ..++|+|.|++ +..
T Consensus 61 ~~~spA~----~aggL~~GD~Il~VnG~~v~~~-~~~~~~~~l~~~~-~~v~l~v~r~g-~~~ 116 (120)
T 2iwo_A 61 HPTGVAA----QTQKLRVGDRIVTICGTSTEGM-THTQAVNLLKNAS-GSIEMQVVAGG-DVS 116 (120)
T ss_dssp CTTSHHH----HHTCCCTTCEEEEETTEECTTC-BHHHHHHHHHHCC-SEEEEEEECCT-TSS
T ss_pred CCCCHHH----HhCCCCCCCEEEEECCEECCCC-CHHHHHHHHHcCC-CeEEEEEEECC-ccc
Confidence 4789999 99 9999999999999886554 6888888998875 46999999998 543
No 71
>2kom_A Partitioning defective 3 homolog; PAR-3B, PDZ domain, PSI, structural genomics, alternative splicing, cell cycle, cell division, cell junction; NMR {Homo sapiens}
Probab=99.09 E-value=2e-10 Score=73.54 Aligned_cols=53 Identities=19% Similarity=0.279 Sum_probs=45.5
Q ss_pred CCCCCccccccccC-CCCCCEEEEECCeecCCcccHHHHHHHHHhC-CCceEEEEEEeCC
Q psy12583 8 SEGYPRQDVDVYQG-LVKDDIILEFGPINSSNFKSLQDIASTVRAG-VNTDIPITVLRNE 65 (96)
Q Consensus 8 ~~~~pa~~~~~~aG-Lk~GD~Il~vng~~~~~~~~~~di~~~i~~~-~g~~i~l~V~R~g 65 (96)
.+++||+ +|| |++||+|++|||.++.++ +++++.++++.. ++.++.|+|.|++
T Consensus 66 ~~gspA~----~aG~L~~GD~Il~Ing~~v~~~-~~~~~~~~l~~~~~g~~v~l~v~R~g 120 (121)
T 2kom_A 66 LPRGAAI----QDGRLKAGDRLIEVNGVDLVGK-SQEEVVSLLRSTKMEGTVSLLVFRQE 120 (121)
T ss_dssp CTTSHHH----HHTCCCSSSEEEEETTEECTTS-CHHHHHHHHHHCCSSCEEEEEEEECC
T ss_pred CCCChHH----HcCCCCCCCEEEEECCEEcCCC-CHHHHHHHHhcCCCCCEEEEEEEeCC
Confidence 4789999 999 999999999999886543 478888999886 4789999999987
No 72
>3ngh_A PDZ domain-containing protein 1; adaptor protein, SR-BI, signaling protein; 1.80A {Mus musculus} SCOP: b.36.1.0
Probab=99.08 E-value=8.5e-11 Score=73.15 Aligned_cols=52 Identities=21% Similarity=0.380 Sum_probs=44.6
Q ss_pred CCCCCccccccccCCCCCCEEEEECCeecCCcccHHHHHHHHHhCCCceEEEEEEeCC
Q psy12583 8 SEGYPRQDVDVYQGLVKDDIILEFGPINSSNFKSLQDIASTVRAGVNTDIPITVLRNE 65 (96)
Q Consensus 8 ~~~~pa~~~~~~aGLk~GD~Il~vng~~~~~~~~~~di~~~i~~~~g~~i~l~V~R~g 65 (96)
.+|+||+ +|||++||+|++|||.++.++. +.++..+++. .+.++.++|.|++
T Consensus 34 ~~~spA~----~aGl~~GD~I~~ing~~v~~~~-~~~~~~~l~~-~g~~v~l~v~r~~ 85 (106)
T 3ngh_A 34 EEGSPAE----KAGLLDGDRVLRINGVFVDKEE-HAQVVELVRK-SGNSVTLLVLDGD 85 (106)
T ss_dssp CTTSHHH----HTTCCTTCEEEEETTEECTTSC-HHHHHHHHHH-TTTEEEEEEECHH
T ss_pred CCCCHHH----HcCCCCCCEEEEECCEECCCCC-HHHHHHHHHh-CCCEEEEEEEECC
Confidence 4789999 9999999999999998865553 6688888884 5779999999987
No 73
>2koj_A Partitioning defective 3 homolog; PDZ domain, structural genomics, alternative splicing, cell cycle, cell division, cell junction, coiled coil; NMR {Mus musculus} PDB: 2ogp_A
Probab=99.08 E-value=2.5e-10 Score=71.53 Aligned_cols=53 Identities=19% Similarity=0.292 Sum_probs=45.8
Q ss_pred CCCCCccccccccC-CCCCCEEEEECCeecCCcccHHHHHHHHHhC-CCceEEEEEEeCC
Q psy12583 8 SEGYPRQDVDVYQG-LVKDDIILEFGPINSSNFKSLQDIASTVRAG-VNTDIPITVLRNE 65 (96)
Q Consensus 8 ~~~~pa~~~~~~aG-Lk~GD~Il~vng~~~~~~~~~~di~~~i~~~-~g~~i~l~V~R~g 65 (96)
.+|+||+ +|| |++||+|++|||.++.++ ++.++..+++.. ++.++.|+|.|++
T Consensus 47 ~~~spA~----~aG~l~~GD~I~~ing~~v~~~-~~~~~~~~l~~~~~g~~v~l~v~R~~ 101 (111)
T 2koj_A 47 LPRGAAI----QDGRLKAGDRLIEVNGVDLAGK-SQEEVVSLLRSTKMEGTVSLLVFRQE 101 (111)
T ss_dssp CSSSHHH----HHCSSCTTCEEEEETTEECTTS-CHHHHHHHHHHCCCSSEEEEEEEECC
T ss_pred CCCChHH----HCCCCCCCCEEEEECCEECCCC-CHHHHHHHHHhCCCCCeEEEEEEeCC
Confidence 3789999 999 999999999999886443 478889999885 4889999999988
No 74
>1i16_A Interleukin 16, LCF; cytokine, lymphocyte chemoattractant factor, PDZ domain; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=99.08 E-value=1.7e-10 Score=74.70 Aligned_cols=53 Identities=15% Similarity=0.205 Sum_probs=46.9
Q ss_pred CCCCCcccccccc-CCCCCCEEEEECCeecCCcccHHHHHHHHHhCCCceEEEEEEeCC
Q psy12583 8 SEGYPRQDVDVYQ-GLVKDDIILEFGPINSSNFKSLQDIASTVRAGVNTDIPITVLRNE 65 (96)
Q Consensus 8 ~~~~pa~~~~~~a-GLk~GD~Il~vng~~~~~~~~~~di~~~i~~~~g~~i~l~V~R~g 65 (96)
.+|+||+ ++ ||++||+|++|||+++..+ +|+++.++++..++..+.++|.|++
T Consensus 65 ~~gs~A~----~aggL~~GD~Il~Vng~~v~~~-~~~~~~~~l~~~~~~~v~l~v~r~~ 118 (130)
T 1i16_A 65 FKGAASE----QSETVQPGDEILQLGGTAMQGL-TRFEAWNIIKALPDGPVTIVIRRKS 118 (130)
T ss_dssp CSSCCCS----SSCCCCTTCCEEECSSCBGGGS-CHHHHHHHHHTSCSSEEEEEEEEES
T ss_pred CCCCHHH----HcCCCCCCCEEEEECCEECCCC-CHHHHHHHHHhCCCceEEEEEEeCC
Confidence 4799999 99 9999999999999775544 6899999999988889999999976
No 75
>2djt_A Unnamed protein product; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.08 E-value=1.4e-10 Score=71.94 Aligned_cols=52 Identities=17% Similarity=0.253 Sum_probs=45.0
Q ss_pred CCCCCccccccccC-CCCCCEEEEECCeecCCcccHHHHHHHHHhCCCceEEEEEEeCC
Q psy12583 8 SEGYPRQDVDVYQG-LVKDDIILEFGPINSSNFKSLQDIASTVRAGVNTDIPITVLRNE 65 (96)
Q Consensus 8 ~~~~pa~~~~~~aG-Lk~GD~Il~vng~~~~~~~~~~di~~~i~~~~g~~i~l~V~R~g 65 (96)
.+++||+ +|| |++||+|++|||.++.++ ++.++..+++. .+.++.|+|.|++
T Consensus 46 ~~~spA~----~aG~l~~GD~I~~vng~~v~~~-~~~~~~~~~~~-~g~~v~l~v~R~g 98 (104)
T 2djt_A 46 LKDGPAQ----RCGRLEVGDLVLHINGESTQGL-THAQAVERIRA-GGPQLHLVIRRPL 98 (104)
T ss_dssp CTTCHHH----HHCSCCTTCBEEEETTEECTTC-CHHHHHHHHHH-TCSEEEEEECCCC
T ss_pred CCCCHHH----HcCCCCCCCEEEEECCEECCCC-CHHHHHHHHHc-CCCeEEEEEEECC
Confidence 4789999 999 999999999999886655 37788888877 6789999999988
No 76
>2w4f_A Protein LAP4; structural protein, phosphoprotein, UBL conjugation, leucine-rich repeat, alternative splicing, cytoplasm, circletail, coiled coil; 1.30A {Homo sapiens}
Probab=99.07 E-value=1.7e-10 Score=70.55 Aligned_cols=52 Identities=21% Similarity=0.303 Sum_probs=41.4
Q ss_pred CCCCCccccccccCCCCCCEEEEECCeecCCcccHHHHHHHHHhCCCceEEEEEEeCC
Q psy12583 8 SEGYPRQDVDVYQGLVKDDIILEFGPINSSNFKSLQDIASTVRAGVNTDIPITVLRNE 65 (96)
Q Consensus 8 ~~~~pa~~~~~~aGLk~GD~Il~vng~~~~~~~~~~di~~~i~~~~g~~i~l~V~R~g 65 (96)
.+++||+ +|||++||+|++|||.++.++..+ +....++. ++.++.++|.|++
T Consensus 42 ~~~spA~----~aGl~~GD~I~~ing~~v~~~~~~-~~~~~~~~-~g~~v~l~v~R~g 93 (97)
T 2w4f_A 42 SEEGPAA----RAGVRVGDKLLEVNGVALQGAEHH-EAVEALRG-AGTAVQMRVWRER 93 (97)
T ss_dssp CTTSHHH----HHTCCTTCEEEEETTEECTTCCHH-HHHHHHHT-SCSEEEEEEECCS
T ss_pred CCCChHH----HcCCCCCCEEEEECCEECCCcCHH-HHHHHHhC-CCCeEEEEEEeCC
Confidence 4789999 999999999999999886655433 23344444 7889999999998
No 77
>2ego_A General receptor for phosphoinositides 1- associated scaffold protein; PDZ domain, ligand-free, protein binding; 1.80A {Rattus norvegicus} PDB: 2egn_A 2egk_A 2pnt_A
Probab=99.07 E-value=3e-10 Score=69.67 Aligned_cols=51 Identities=22% Similarity=0.334 Sum_probs=43.4
Q ss_pred CCCCCccccccccCCCCCCEEEEECCeecCCcccHHHHHHHHHhCCCceEEEEEEeC
Q psy12583 8 SEGYPRQDVDVYQGLVKDDIILEFGPINSSNFKSLQDIASTVRAGVNTDIPITVLRN 64 (96)
Q Consensus 8 ~~~~pa~~~~~~aGLk~GD~Il~vng~~~~~~~~~~di~~~i~~~~g~~i~l~V~R~ 64 (96)
.+++||+ +|||++||+|++|||.++.++ ++.++..+++..+ .++.|+|.|+
T Consensus 45 ~~~spA~----~aGL~~GD~I~~ing~~v~~~-~~~~~~~~l~~~~-~~v~l~v~~~ 95 (96)
T 2ego_A 45 HESSPAQ----LAGLTPGDTIASVNGLNVEGI-RHREIVDIIKASG-NVLRLETLYG 95 (96)
T ss_dssp CTTCHHH----HTTCCTTCEEEEETTEECTTC-CHHHHHHHHHHTT-TEEEEEEECC
T ss_pred CCCChHH----HcCCCCCCEEEEECCEECCCC-CHHHHHHHHHhCC-CeEEEEEEEC
Confidence 4789999 999999999999999875443 4789999999875 4999999875
No 78
>2fe5_A Presynaptic protein SAP102; PDZ domain, DLG3, human, structural genomics, structural GEN consortium, SGC, structural protein; HET: GOL; 1.10A {Homo sapiens} SCOP: b.36.1.1 PDB: 2x7z_A 2oqs_A 1qlc_A 2i0l_A
Probab=99.07 E-value=2.9e-10 Score=69.11 Aligned_cols=52 Identities=17% Similarity=0.222 Sum_probs=43.6
Q ss_pred CCCCCccccccccC-CCCCCEEEEECCeecCCcccHHHHHHHHHhCCCceEEEEEEeCC
Q psy12583 8 SEGYPRQDVDVYQG-LVKDDIILEFGPINSSNFKSLQDIASTVRAGVNTDIPITVLRNE 65 (96)
Q Consensus 8 ~~~~pa~~~~~~aG-Lk~GD~Il~vng~~~~~~~~~~di~~~i~~~~g~~i~l~V~R~g 65 (96)
.+++||+ ++| |++||+|++|||.++.++ ++.++...++... .++.|+|.|++
T Consensus 41 ~~~spA~----~aG~l~~GD~I~~vng~~v~~~-~~~~~~~~~~~~~-~~v~l~v~R~g 93 (94)
T 2fe5_A 41 IEGGAAQ----KDGRLQIGDRLLAVNNTNLQDV-RHEEAVASLKNTS-DMVYLKVAKPG 93 (94)
T ss_dssp CTTSHHH----HHCCCCTTCEEEEETTEECTTC-BHHHHHHHHHTCC-SEEEEEEECCC
T ss_pred CCCChHH----HcCCCCCCCEEEEECCEECCCC-CHHHHHHHHHcCC-CeEEEEEEcCC
Confidence 4789999 999 999999999999886554 4678888887654 58999999987
No 79
>2kjd_A Sodium/hydrogen exchange regulatory cofactor NHE- RF1; PDZ domain, protein, acetylation, cell projection, disease mutation, membrane; NMR {Homo sapiens}
Probab=99.07 E-value=1.1e-11 Score=79.66 Aligned_cols=63 Identities=22% Similarity=0.250 Sum_probs=52.3
Q ss_pred CCCCCccccccccCCCCCCEEEEECCeecCCcccHHHHHHHHHhCCCceEEEEEEeCCceEEE--EEEeec
Q psy12583 8 SEGYPRQDVDVYQGLVKDDIILEFGPINSSNFKSLQDIASTVRAGVNTDIPITVLRNEGTRQR--LVLRPQ 76 (96)
Q Consensus 8 ~~~~pa~~~~~~aGLk~GD~Il~vng~~~~~~~~~~di~~~i~~~~g~~i~l~V~R~g~~~~~--l~v~p~ 76 (96)
.+++||+ +|||++||+|++|||.++.+. ++.++..+++...+..+.++|.|++ +... ++++|.
T Consensus 41 ~~~spA~----~aGl~~GD~I~~ing~~v~~~-~~~~~~~~l~~~~~~~~~l~v~R~g-~~~~~~~~l~~~ 105 (128)
T 2kjd_A 41 DPDSPAE----ASGLRAQDRIVEVNGVCMEGK-QHGDVVSAIRAGGDETKLLVVDRET-DEFFKKCRVIPS 105 (128)
T ss_dssp CTTSHHH----HHTCCTTCEEEEETTEECTTC-CHHHHHHHHHTTCSEEEEEEECHHH-HHHHHHHTCCCC
T ss_pred CCCChHH----HcCCCCCCEEEEECCEECCCC-CHHHHHHHHHhCCCCEEEEEEEeCC-cceEEEEEEEec
Confidence 4789999 999999999999999775332 3899999999888889999999998 6655 566664
No 80
>3cbz_A Dishevelled-2; PDZ domain, phage derived high affinity ligand, cytoplasm, developmental protein, phosphoprotein, WNT signaling pathway; 1.38A {Homo sapiens} PDB: 3cby_A 3cc0_A 3cbx_A 2rey_A 2f0a_A 1l6o_A 3fy5_A 2kaw_A* 1mc7_A
Probab=99.07 E-value=1.8e-10 Score=72.42 Aligned_cols=53 Identities=23% Similarity=0.282 Sum_probs=45.5
Q ss_pred CCCCCccccccccC-CCCCCEEEEECCeecCCcccHHHHHHHHHhC--CCceEEEEEEeCC
Q psy12583 8 SEGYPRQDVDVYQG-LVKDDIILEFGPINSSNFKSLQDIASTVRAG--VNTDIPITVLRNE 65 (96)
Q Consensus 8 ~~~~pa~~~~~~aG-Lk~GD~Il~vng~~~~~~~~~~di~~~i~~~--~g~~i~l~V~R~g 65 (96)
.+++||+ ++| |++||+|++|||+++.+. +|+++..+++.. .+.++.|+|.|.+
T Consensus 41 ~~~spA~----~aG~L~~GD~Il~Vng~~v~~~-~~~~~~~~l~~~~~~~~~v~l~v~R~~ 96 (108)
T 3cbz_A 41 MKGGAVA----ADGRIEPGDMLLQVNDMNFENM-SNDDAVRVLRDIVHKPGPIVLTVAKSG 96 (108)
T ss_dssp CTTSHHH----HHCCCCTTCEEEEETTEETTSC-CHHHHHHHHHHHHTSSSCEEEEEECCC
T ss_pred CCCChHH----hcCCCCCCCEEEEECCEECCCC-CHHHHHHHHHhcccCCCeEEEEEEeCC
Confidence 4789999 999 999999999999886554 589999999876 4457999999987
No 81
>3qik_A Phosphatidylinositol 3,4,5-trisphosphate-dependen exchanger 1 protein; PDZ domain, structural genomics consortium, SGC, hydrolase R; 2.29A {Homo sapiens}
Probab=99.07 E-value=1.2e-10 Score=73.69 Aligned_cols=50 Identities=12% Similarity=0.140 Sum_probs=42.8
Q ss_pred CCCCCccccccccCCCCCCEEEEECCeecCCcccHHHHHHHHHh--CCCceEEEEEE
Q psy12583 8 SEGYPRQDVDVYQGLVKDDIILEFGPINSSNFKSLQDIASTVRA--GVNTDIPITVL 62 (96)
Q Consensus 8 ~~~~pa~~~~~~aGLk~GD~Il~vng~~~~~~~~~~di~~~i~~--~~g~~i~l~V~ 62 (96)
.+||||+ +|||++||+|++|||.++ ...+|+++..+++. +.++++.|.|-
T Consensus 47 ~~gSpA~----~AGL~~GD~I~~Ing~~v-~~~s~~dv~~~i~~~~~~g~~v~LLV~ 98 (101)
T 3qik_A 47 QRGSLAE----VAGLQVGRKIYSINEDLV-FLRPFSEVESILNQSFCSRRPLRLLVA 98 (101)
T ss_dssp CTTSHHH----HHTCCTTCBEEEETTEES-TTSCHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred CCCCHHH----HcCCCCCCEEEEECCEEc-CcCCHHHHHHHHHHhhccCCeEEEEEe
Confidence 4899999 999999999999999773 23589999999997 47888888775
No 82
>1wi4_A Synip, syntaxin binding protein 4; syntaxin4-interacting protein, STXBP4 protein, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.07 E-value=1.7e-10 Score=72.82 Aligned_cols=53 Identities=15% Similarity=0.182 Sum_probs=46.5
Q ss_pred CCCCCccccccccC-CCCCCEEEEECCeecCCcccHHHHHHHHHhCC---CceEEEEEEeCC
Q psy12583 8 SEGYPRQDVDVYQG-LVKDDIILEFGPINSSNFKSLQDIASTVRAGV---NTDIPITVLRNE 65 (96)
Q Consensus 8 ~~~~pa~~~~~~aG-Lk~GD~Il~vng~~~~~~~~~~di~~~i~~~~---g~~i~l~V~R~g 65 (96)
.+++||+ ++| |++||+|++|||++...+ +|+++.++|+... +.++++++.|++
T Consensus 49 ~~~s~A~----~aG~l~~GD~Il~Vng~~~~~~-~~~~~~~~l~~~~~r~~~~~~l~v~R~~ 105 (109)
T 1wi4_A 49 IPGGDCY----KDGRLKPGDQLVSINKESMIGV-SFEEAKSIITRAKLRSESPWEIAFIRSG 105 (109)
T ss_dssp CTTSHHH----HHCSCCTTCBEEEETTSCCTTC-CHHHHHHHHHHSCCSSSSCEEEEEECCC
T ss_pred CCCChHH----HCCCCCCCCEEEEECCEECCCC-CHHHHHHHHHccccCCCceEEEEEEeCC
Confidence 4789999 999 999999999999775443 5999999999888 889999999987
No 83
>1vae_A Rhophilin 2, rhophilin, RHO GTPase binding protein 2; PDZ domain, intracellular signaling cascade, signal transduction; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.06 E-value=1.7e-10 Score=73.21 Aligned_cols=52 Identities=8% Similarity=0.167 Sum_probs=44.7
Q ss_pred CCCCCccccccccCCCCCCEEEEECCeecCCcccHHHHHHHHHhCCCceEEEEEEeC
Q psy12583 8 SEGYPRQDVDVYQGLVKDDIILEFGPINSSNFKSLQDIASTVRAGVNTDIPITVLRN 64 (96)
Q Consensus 8 ~~~~pa~~~~~~aGLk~GD~Il~vng~~~~~~~~~~di~~~i~~~~g~~i~l~V~R~ 64 (96)
.+++||+ +|||++||+|++|||.++.. .+|+++.++++...++++.|+|.|.
T Consensus 44 ~~~spA~----~aGL~~GD~Il~InG~~v~~-~~~~d~~~~i~~~~~~~v~l~V~~~ 95 (111)
T 1vae_A 44 DPHCSAS----LAGAKEGDYIVSIQGVDCKW-LTVSEVMKLLKSFGGEEVEMKVVSL 95 (111)
T ss_dssp CTTSSHH----HHHCCTTCEEEEETTEECSS-CCHHHHHHHHHHTTTSEECEEEECE
T ss_pred CCCCHHH----HcCCCCCCEEEEECCEECCC-CCHHHHHHHHHhCCCceEEEEEEec
Confidence 4789999 99999999999999977432 2899999999988888899999874
No 84
>2r4h_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; transferase, STRU genomics, structural genomics consortium, SGC, ATP-binding; HET: HIS; 2.05A {Homo sapiens}
Probab=99.06 E-value=2.7e-10 Score=71.91 Aligned_cols=52 Identities=19% Similarity=0.259 Sum_probs=44.5
Q ss_pred CCCCCccccccccC-CCCCCEEEEECCeecCCcccHHHHHHHHHhCCCceEEEEEEeCC
Q psy12583 8 SEGYPRQDVDVYQG-LVKDDIILEFGPINSSNFKSLQDIASTVRAGVNTDIPITVLRNE 65 (96)
Q Consensus 8 ~~~~pa~~~~~~aG-Lk~GD~Il~vng~~~~~~~~~~di~~~i~~~~g~~i~l~V~R~g 65 (96)
.+++||+ +|| |++||+|++|||.++.++ ++.++...++. .+.++.|+|.|++
T Consensus 57 ~~~spA~----~aG~L~~GD~Il~Vng~~v~~~-~~~~~~~~l~~-~g~~v~l~v~R~~ 109 (112)
T 2r4h_A 57 AEDGPAE----RSGKMRIGDEILEINGETTKNM-KHSRAIELIKN-GGRRVRLFLKRGE 109 (112)
T ss_dssp CTTSHHH----HTTCCCTTCEEEEETTEECTTC-CHHHHHHHHHT-TTTEEEEEEECCE
T ss_pred CCCChHH----HcCCCCCCCEEEEECCEECCCC-CHHHHHHHHHc-CCCeEEEEEEeCC
Confidence 4789999 999 999999999999886554 57788788876 5789999999987
No 85
>3num_A Serine protease HTRA1; DEGP, hydrolase; 2.75A {Homo sapiens} PDB: 3nzi_A 2ytw_A 2joa_A
Probab=99.06 E-value=1.6e-11 Score=90.22 Aligned_cols=60 Identities=17% Similarity=0.351 Sum_probs=0.0
Q ss_pred CCCCCccccccccCCCCCCEEEEECCeecCCcccHHHHHHHHHhCCCceEEEEEEeCCceEEEEEEeecC
Q psy12583 8 SEGYPRQDVDVYQGLVKDDIILEFGPINSSNFKSLQDIASTVRAGVNTDIPITVLRNEGTRQRLVLRPQP 77 (96)
Q Consensus 8 ~~~~pa~~~~~~aGLk~GD~Il~vng~~~~~~~~~~di~~~i~~~~g~~i~l~V~R~g~~~~~l~v~p~~ 77 (96)
.++|||+ +|||++||+|++|||++ +.+|.++..+++. +.+++|+|+|++ +.++++++|..
T Consensus 262 ~~~spA~----~aGl~~GD~I~~ing~~---v~~~~~~~~~l~~--~~~v~l~v~R~g-~~~~~~v~p~~ 321 (332)
T 3num_A 262 IPDTPAE----AGGLKENDVIISINGQS---VVSANDVSDVIKR--ESTLNMVVRRGN-EDIMITVIPEE 321 (332)
T ss_dssp ----------------------------------------------------------------------
T ss_pred ccCCChH----HcCCCCCCEEEEECCEE---CCCHHHHHHHHhC--CCeEEEEEEECC-EEEEEEEEEee
Confidence 4789999 99999999999999965 5778888888875 678999999999 99999999975
No 86
>1v5q_A GRIP1 homolog, glutamate receptor interacting protein 1A-L homolog; PDZ domain, cellular signaling, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.06 E-value=1.4e-10 Score=74.29 Aligned_cols=53 Identities=11% Similarity=0.267 Sum_probs=45.9
Q ss_pred CCCCCccccccccC-CCCCCEEEEECCeecCCcccHHHHHHHHHhCC-CceEEEEEEeCC
Q psy12583 8 SEGYPRQDVDVYQG-LVKDDIILEFGPINSSNFKSLQDIASTVRAGV-NTDIPITVLRNE 65 (96)
Q Consensus 8 ~~~~pa~~~~~~aG-Lk~GD~Il~vng~~~~~~~~~~di~~~i~~~~-g~~i~l~V~R~g 65 (96)
.+++||+ +|| |++||+|++|||+++.+ .+|+++.++++... +.++.|+|+|++
T Consensus 53 ~~~spA~----~aG~L~~GD~I~~ing~~v~~-~~~~~~~~~l~~~~~g~~v~l~v~R~~ 107 (122)
T 1v5q_A 53 EADSPAE----RCGVLQIGDRVMAINGIPTED-STFEEANQLLRDSSITSKVTLEIEFDV 107 (122)
T ss_dssp CTTSHHH----HSCCCCTTCCEEEETTEESSS-SCHHHHHHHHHHHTTTTCEEEEEEEEC
T ss_pred CCCChHH----HcCCCCCCCEEEEECCEECCC-CCHHHHHHHHHhCCCCCeEEEEEEECC
Confidence 3789999 999 99999999999977533 24899999999876 889999999988
No 87
>3pv2_A DEGQ; trypsin fold, PDZ domain, chaperone protease, hydrolase; 2.15A {Legionella fallonii} PDB: 3pv3_A 3pv5_A 3pv4_A
Probab=99.06 E-value=4.8e-10 Score=85.83 Aligned_cols=61 Identities=20% Similarity=0.293 Sum_probs=54.3
Q ss_pred CCCCCccccccccCCCCCCEEEEECCeecCCcccHHHHHHHHHh-CCCceEEEEEEeCCceEEEEEEeec
Q psy12583 8 SEGYPRQDVDVYQGLVKDDIILEFGPINSSNFKSLQDIASTVRA-GVNTDIPITVLRNEGTRQRLVLRPQ 76 (96)
Q Consensus 8 ~~~~pa~~~~~~aGLk~GD~Il~vng~~~~~~~~~~di~~~i~~-~~g~~i~l~V~R~g~~~~~l~v~p~ 76 (96)
.+++||+ +|||++||+|++|||++ +.+|.++..++.. .+|.+++++|.|++ +.+++++++.
T Consensus 290 ~~~spA~----~aGL~~GDvI~~vnG~~---v~~~~~l~~~l~~~~~g~~v~l~V~R~g-~~~~~~v~l~ 351 (451)
T 3pv2_A 290 NPNSPAE----LAGLKAGDIITQINDTK---ITQATQVKTTISLLRVGSTVKIIVERDN-KPLTLSAVVT 351 (451)
T ss_dssp CTTSHHH----HHTCCTTCEEEEETTEE---CCSHHHHHHHHHTSCTTCEEEEEEEETT-EEEEEEEECB
T ss_pred CCCChHH----HcCCCCCCEEEEECCEE---cCCHHHHHHHHHhcCCCCEEEEEEEECC-EEEEEEEEEc
Confidence 4789999 99999999999999966 5788999998885 56899999999999 9888888775
No 88
>1ujd_A KIAA0559 protein; PDZ domain, structural genomics, human cDNA, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.05 E-value=1.5e-10 Score=73.56 Aligned_cols=52 Identities=17% Similarity=0.234 Sum_probs=45.0
Q ss_pred CCCCCccccccccC-CCCCCEEEEECCeecCCcccHHHHHHHHHhCCCceEEEEEEeCC
Q psy12583 8 SEGYPRQDVDVYQG-LVKDDIILEFGPINSSNFKSLQDIASTVRAGVNTDIPITVLRNE 65 (96)
Q Consensus 8 ~~~~pa~~~~~~aG-Lk~GD~Il~vng~~~~~~~~~~di~~~i~~~~g~~i~l~V~R~g 65 (96)
.+++||+ ++| |++||+|++|||+++.+. +|.++..+++. .+.++.|+|+|++
T Consensus 57 ~~~s~A~----~aG~L~~GD~Il~vng~~v~~~-~~~~~~~~l~~-~~~~v~l~v~R~~ 109 (117)
T 1ujd_A 57 LPGGSAE----QTGKLMEGMQVLEWNGIPLTSK-TYEEVQSIISQ-QSGEAEICVRLDL 109 (117)
T ss_dssp CTTCHHH----HHSSCCTTCEEEEETTEECTTC-CHHHHHHHHSC-CSSCEEEEEESSC
T ss_pred CCCCHHH----HcCCCCCCCEEEEECCEEcCCC-CHHHHHHHHhc-CCCEEEEEEEECC
Confidence 4789999 999 999999999999886443 57888888887 5678999999988
No 89
>2dlu_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.05 E-value=1.5e-10 Score=72.70 Aligned_cols=54 Identities=22% Similarity=0.350 Sum_probs=44.9
Q ss_pred CCCCCccccccccC-CCCCCEEEEECCeecCCcccHHHHHHHHHhCCCceEEEEEEeCCceE
Q psy12583 8 SEGYPRQDVDVYQG-LVKDDIILEFGPINSSNFKSLQDIASTVRAGVNTDIPITVLRNEGTR 68 (96)
Q Consensus 8 ~~~~pa~~~~~~aG-Lk~GD~Il~vng~~~~~~~~~~di~~~i~~~~g~~i~l~V~R~g~~~ 68 (96)
.+++||+ ++| |++||+|++|||+++.++ ++.++..+++. .+..+.|+|.|++ ..
T Consensus 46 ~~~spA~----~aG~l~~GD~I~~vng~~v~~~-~~~~~~~~l~~-~g~~v~l~v~R~~-~~ 100 (111)
T 2dlu_A 46 VPGGLAD----RDGRLQTGDHILKIGGTNVQGM-TSEQVAQVLRN-CGNSVRMLVARDP-AG 100 (111)
T ss_dssp CTTSSHH----HHTCCCSSCEEEEESSCCCTTS-CHHHHHHHHHH-HCSEEEEEEEESC-TT
T ss_pred CCCCHHH----HcCCCCCCCEEEEECCEECCCC-CHHHHHHHHHh-CCCeEEEEEEeCC-CC
Confidence 4789999 999 999999999999775433 56888888886 4678999999988 54
No 90
>2fne_A Multiple PDZ domain protein; structural protein, structural genomics, SGC, structural genomics consortium, unknown function; 1.83A {Homo sapiens} SCOP: b.36.1.1
Probab=99.05 E-value=4.5e-10 Score=71.67 Aligned_cols=54 Identities=11% Similarity=0.182 Sum_probs=45.7
Q ss_pred CCCCCccccccccC-CCCCCEEEEECCeecCCcccHHHHHHHHHhCCCceEEEEEEeCCceE
Q psy12583 8 SEGYPRQDVDVYQG-LVKDDIILEFGPINSSNFKSLQDIASTVRAGVNTDIPITVLRNEGTR 68 (96)
Q Consensus 8 ~~~~pa~~~~~~aG-Lk~GD~Il~vng~~~~~~~~~~di~~~i~~~~g~~i~l~V~R~g~~~ 68 (96)
.+++||+ ++| |++||+|++|||.++.+. ++.++..+++...+ ++.|+|.|++ +.
T Consensus 61 ~~~spA~----~aG~L~~GD~Il~Vng~~v~~~-~~~~~~~~l~~~~~-~v~l~v~R~g-~~ 115 (117)
T 2fne_A 61 FAKGAAS----EDGRLKRGDQIIAVNGQSLEGV-THEEAVAILKRTKG-TVTLMVLSSD-ET 115 (117)
T ss_dssp CTTSHHH----HHCCCCTTCEEEEETTEECTTC-CHHHHHHHHHHCCS-SEEEEEEECS-CE
T ss_pred CCCChHH----HcCCCCCCCEEEEECCEECCCC-CHHHHHHHHHcCCC-eEEEEEEeCC-cc
Confidence 4789999 999 999999999999886443 78899999987655 6999999988 53
No 91
>1wif_A RSGI RUH-020, riken cDNA 4930408O21; PDZ domain, structural genomics, mouse cDNA, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.05 E-value=3.8e-10 Score=73.52 Aligned_cols=53 Identities=17% Similarity=0.252 Sum_probs=45.2
Q ss_pred CCCCCccccccccC-CCCCCEEEEECCeecCCcccHHHHHHHHHh-CCCceEEEEEEeCC
Q psy12583 8 SEGYPRQDVDVYQG-LVKDDIILEFGPINSSNFKSLQDIASTVRA-GVNTDIPITVLRNE 65 (96)
Q Consensus 8 ~~~~pa~~~~~~aG-Lk~GD~Il~vng~~~~~~~~~~di~~~i~~-~~g~~i~l~V~R~g 65 (96)
.+|+||+ +|| |++||+|++|||.++.. .+|.++.++++. .+|.++.|+|.|+-
T Consensus 57 ~~gspA~----~aG~L~~GD~Il~VnG~~v~~-~s~~d~~~~l~~~~~G~~v~l~V~R~~ 111 (126)
T 1wif_A 57 INKGAAA----SDGILQPGDVLISVGHANVLG-YTLREFLKLLQNITIGTVLQIKAYRGF 111 (126)
T ss_dssp CTTSSGG----GCSSSCTTCBEEEESSSCCTT-CCHHHHHHHHTSCCSSCEEEEEEESSS
T ss_pred CCCCHHH----HcCCCCCCCEEEEECCEEcCC-CCHHHHHHHHhcCCCCCEEEEEEEECC
Confidence 5789999 999 99999999999965321 479999999997 46899999999974
No 92
>2edp_A Fragment, shroom family member 4; APX/shroom family member, KIAA1202 protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.05 E-value=2.5e-10 Score=70.69 Aligned_cols=51 Identities=10% Similarity=0.086 Sum_probs=43.6
Q ss_pred CCCCCcccccccc-CCCCCCEEEEECCeecCCcccHHHHHHHHHhCCCceEEEEEEeCC
Q psy12583 8 SEGYPRQDVDVYQ-GLVKDDIILEFGPINSSNFKSLQDIASTVRAGVNTDIPITVLRNE 65 (96)
Q Consensus 8 ~~~~pa~~~~~~a-GLk~GD~Il~vng~~~~~~~~~~di~~~i~~~~g~~i~l~V~R~g 65 (96)
.+++||+ +| ||++||+|++|||.++.++ +.++..+++.. +.++.|+|+|++
T Consensus 43 ~~~spA~----~agGL~~GD~I~~ing~~v~~~--~~~~~~~~~~~-~~~v~l~v~R~~ 94 (100)
T 2edp_A 43 EDGGKAA----LSQKMRTGDELVNINGTPLYGS--RQEALILIKGS-FRILKLIVRRRN 94 (100)
T ss_dssp CTTSHHH----HHTSCCTTCEEEEETTEECCSC--SHHHHHHHHTC-CSSCEEEEEECC
T ss_pred CCCCHHH----HcCCCCCCCEEEEECCEEccch--HHHHHHHHHhC-CCeEEEEEEeCC
Confidence 4789999 99 9999999999999887553 57777888764 688999999988
No 93
>2kpk_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; PDZ domain, ATP-binding, cell junction, cell membrane; NMR {Homo sapiens} PDB: 2kpl_A
Probab=99.05 E-value=3.9e-10 Score=72.86 Aligned_cols=53 Identities=9% Similarity=0.158 Sum_probs=46.4
Q ss_pred CCCCCccccccccC-CCCCCEEEEECCeecCCcccHHHHHHHHHhCC-CceEEEEEEeCC
Q psy12583 8 SEGYPRQDVDVYQG-LVKDDIILEFGPINSSNFKSLQDIASTVRAGV-NTDIPITVLRNE 65 (96)
Q Consensus 8 ~~~~pa~~~~~~aG-Lk~GD~Il~vng~~~~~~~~~~di~~~i~~~~-g~~i~l~V~R~g 65 (96)
.+++||+ +|| |++||+|++|||.++.+. +|.++.++++... +.++.|+|.|+.
T Consensus 51 ~~~spA~----~aG~L~~GD~Il~vng~~v~~~-~~~~~~~~l~~~~~g~~v~l~v~R~~ 105 (129)
T 2kpk_A 51 VLDGPAA----LDGKMETGDVIVSVNDTCVLGH-THAQVVKIFQSIPIGASVDLELCRGY 105 (129)
T ss_dssp CTTSHHH----HHSSCCTTCEEEEETTEECTTS-CHHHHHHHHHHSCTTEEEEEEEEECS
T ss_pred CCCChHH----HcCCCCCCCEEEEECCEECCCC-CHHHHHHHHHhCCCCCeEEEEEEeCC
Confidence 4789999 999 999999999999886443 5889999999876 889999999987
No 94
>2d92_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.04 E-value=3.1e-10 Score=71.12 Aligned_cols=53 Identities=13% Similarity=0.128 Sum_probs=46.0
Q ss_pred CCCCCccccccccC-CCCCCEEEEECCeecCCcccHHHHHHHHHhCCCceEEEEEEeCC
Q psy12583 8 SEGYPRQDVDVYQG-LVKDDIILEFGPINSSNFKSLQDIASTVRAGVNTDIPITVLRNE 65 (96)
Q Consensus 8 ~~~~pa~~~~~~aG-Lk~GD~Il~vng~~~~~~~~~~di~~~i~~~~g~~i~l~V~R~g 65 (96)
.+++||+ ++| |++||+|++|||+++.. .+|.++..+++..++.++.|+|.|..
T Consensus 52 ~~~spA~----~aG~L~~GD~Il~Vng~~v~~-~~~~~~~~~l~~~~~~~v~l~v~R~~ 105 (108)
T 2d92_A 52 VADGVAE----RSGGLLPGDRLVSVNEYCLDN-TSLAEAVEILKAVPPGLVHLGICSGP 105 (108)
T ss_dssp CTTCHHH----HHTCCCTTCEEEEESSCBCTT-CCHHHHHHHHHHSCSEEEEEEEECCC
T ss_pred CCCCHHH----HCCCCCCCCEEEEECCEECCC-CCHHHHHHHHHhCCCCeEEEEEEcCC
Confidence 4789999 999 99999999999977544 36899999999987779999999964
No 95
>1wfg_A Regulating synaptic membrane exocytosis protein 2; PDZ domain, RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2css_A 1zub_A
Probab=99.04 E-value=3.7e-10 Score=73.38 Aligned_cols=53 Identities=15% Similarity=0.232 Sum_probs=46.2
Q ss_pred CCCCCccccccccC-CCCCCEEEEECCeecCCcccHHHHHHHHHhC-CCceEEEEEEeCC
Q psy12583 8 SEGYPRQDVDVYQG-LVKDDIILEFGPINSSNFKSLQDIASTVRAG-VNTDIPITVLRNE 65 (96)
Q Consensus 8 ~~~~pa~~~~~~aG-Lk~GD~Il~vng~~~~~~~~~~di~~~i~~~-~g~~i~l~V~R~g 65 (96)
.+++||+ ++| |++||+|++|||+++.+. ++.++..+++.. ++..+.|+|.|++
T Consensus 73 ~~gspA~----~aG~L~~GD~Il~ing~~v~~~-~~~~~~~~l~~~~~g~~v~l~v~R~g 127 (131)
T 1wfg_A 73 KKGSLAD----TVGHLRPGDEVLEWNGRLLQGA-TFEEVYNIILESKPEPQVELVVSRSG 127 (131)
T ss_dssp CTTSHHH----HTSCCCTTCEEEEETTEECTTC-CHHHHHHHHHHTSSSSEEEEEEEEEC
T ss_pred CCCChHH----HcCCCCCCCEEEEECCEECCCC-CHHHHHHHHHhcCCCCEEEEEEEcCC
Confidence 4789999 999 999999999999886443 688999999987 6789999999976
No 96
>1ueq_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.04 E-value=5.1e-10 Score=71.70 Aligned_cols=53 Identities=11% Similarity=0.191 Sum_probs=46.2
Q ss_pred CCCCCccccccccC-CCCCCEEEEECCeecCCcccHHHHHHHHHhCC-CceEEEEEEeCC
Q psy12583 8 SEGYPRQDVDVYQG-LVKDDIILEFGPINSSNFKSLQDIASTVRAGV-NTDIPITVLRNE 65 (96)
Q Consensus 8 ~~~~pa~~~~~~aG-Lk~GD~Il~vng~~~~~~~~~~di~~~i~~~~-g~~i~l~V~R~g 65 (96)
.+++||+ ++| |++||+|++|||+++..+ ++.++..+++... +.++.|+|.|++
T Consensus 52 ~~~spA~----~aG~L~~GD~Il~Vng~~v~~~-~~~~~~~~l~~~~~g~~v~l~v~R~~ 106 (123)
T 1ueq_A 52 IPDGPAA----QDGKMETGDVIVYINEVCVLGH-THADVVKLFQSVPIGQSVNLVLCRGY 106 (123)
T ss_dssp CTTSHHH----HTSCCCTTCEEEEETTEECTTS-CHHHHHHHHHTSCTTCEEEEEEEESC
T ss_pred CCCCHHH----HCCCCCCCCEEEEECCEECCCC-CHHHHHHHHHhCCCCCeEEEEEEeCC
Confidence 4789999 999 999999999999875443 6889999999875 889999999987
No 97
>1g9o_A NHE-RF; PDZ domain, complex, signaling protein; 1.50A {Homo sapiens} SCOP: b.36.1.1 PDB: 1i92_A 1gq4_A 1gq5_A 2ocs_A
Probab=99.04 E-value=3.8e-10 Score=68.29 Aligned_cols=53 Identities=25% Similarity=0.312 Sum_probs=43.9
Q ss_pred CCCCCccccccccCCCCCCEEEEECCeecCCcccHHHHHHHHHhCCCceEEEEEEeCC
Q psy12583 8 SEGYPRQDVDVYQGLVKDDIILEFGPINSSNFKSLQDIASTVRAGVNTDIPITVLRNE 65 (96)
Q Consensus 8 ~~~~pa~~~~~~aGLk~GD~Il~vng~~~~~~~~~~di~~~i~~~~g~~i~l~V~R~g 65 (96)
.++|||+ +|||++||+|++|||.++.+. ++.++...++..++..+.+.+.|++
T Consensus 35 ~~~spA~----~aGL~~GD~I~~ing~~v~~~-~~~~~~~~l~~~~~~~~~~~~~r~~ 87 (91)
T 1g9o_A 35 EPGSPAE----KAGLLAGDRLVEVNGENVEKE-THQQVVSRIRAALNAVRLLVVDPET 87 (91)
T ss_dssp CTTSHHH----HTTCCTTCEEEEETTEECTTC-CHHHHHHHHHTCSSEEEEEEECCCC
T ss_pred CCCCHHH----HCCCCCCCEEEEECCEECCCC-CHHHHHHHHHcCCCcEEEEEEcCCc
Confidence 4789999 999999999999999886543 4788889999877777777777766
No 98
>3tsv_A Tight junction protein ZO-1; PDZ, scaffolding, JAM, cell adhesion; 1.99A {Homo sapiens} PDB: 3shu_A
Probab=99.04 E-value=2.1e-10 Score=74.01 Aligned_cols=53 Identities=17% Similarity=0.248 Sum_probs=44.4
Q ss_pred CCCCCccccccccCCCCCCEEEEECCeecCCcccHHHHHHHHHh-CCCceEEEEEEeCC
Q psy12583 8 SEGYPRQDVDVYQGLVKDDIILEFGPINSSNFKSLQDIASTVRA-GVNTDIPITVLRNE 65 (96)
Q Consensus 8 ~~~~pa~~~~~~aGLk~GD~Il~vng~~~~~~~~~~di~~~i~~-~~g~~i~l~V~R~g 65 (96)
.+++||+ +|||++||+|++|||.++.++ ++.++..++.. .++.++.|+|.|++
T Consensus 59 ~~gspA~----~aGL~~GD~Il~Vng~~v~~~-~~~~~~~~l~~~~~g~~v~l~v~R~~ 112 (124)
T 3tsv_A 59 LEDSPAA----KEGLEEGDQILRVNNVDFTNI-IREEAVLFLLDLPKGEEVTILAQKKK 112 (124)
T ss_dssp CTTCHHH----HTTCCTTEEEEEETTEECSSC-CHHHHHHHHHHSCTTCEEEEEEEECH
T ss_pred CCCCHHH----HcCCCCCCEEEEECCEECCCC-CHHHHHHHHHhcCCCCEEEEEEEECC
Confidence 4789999 999999999999999875443 23788887775 67889999999987
No 99
>2yt7_A Amyloid beta A4 precursor protein-binding family A member 3; neuron-specific X11L2 protein, neuronal MUNC18-1-interacting protein 3, MINT-3; NMR {Homo sapiens}
Probab=99.04 E-value=5.2e-10 Score=69.32 Aligned_cols=52 Identities=15% Similarity=0.211 Sum_probs=43.8
Q ss_pred CCCCCccccccc-cCCCCCCEEEEECCeecCCcccHHHHHHHHHhC-CCceEEEEEEeC
Q psy12583 8 SEGYPRQDVDVY-QGLVKDDIILEFGPINSSNFKSLQDIASTVRAG-VNTDIPITVLRN 64 (96)
Q Consensus 8 ~~~~pa~~~~~~-aGLk~GD~Il~vng~~~~~~~~~~di~~~i~~~-~g~~i~l~V~R~ 64 (96)
.+|+||+ + +||++||+|++|||.++.. .+|+++.++|+.. .+.+++|+|.|.
T Consensus 45 ~~~spA~----~~ggl~~GD~I~~Ing~~v~~-~~~~~~~~~l~~~~~g~~v~l~v~R~ 98 (101)
T 2yt7_A 45 LHGGPAE----RSGALSIGDRLTAINGTSLVG-LPLAACQAAVRETKSQTSVTLSIVHC 98 (101)
T ss_dssp CTTSTTG----GGSSCCTTCEEEEESSCBCTT-SCHHHHHHHHHHTTTSSEEEEEECCC
T ss_pred CCCCHHH----HcCCCCCCCEEEEECCEECCC-CCHHHHHHHHHhCCCCCeEEEEEEeC
Confidence 4789999 9 6799999999999966322 5899999999985 678999999884
No 100
>1y7n_A Amyloid beta A4 precursor protein-binding family A member 1; copper chaperone for superoxide dismutase, neuronal adaptor, protein transport; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.03 E-value=5e-10 Score=68.59 Aligned_cols=51 Identities=12% Similarity=0.129 Sum_probs=43.4
Q ss_pred CCCCCccccccccCCCCCCEEEEECCeecCCcccHHHHHHHHHhCCCceEEEEEEeC
Q psy12583 8 SEGYPRQDVDVYQGLVKDDIILEFGPINSSNFKSLQDIASTVRAGVNTDIPITVLRN 64 (96)
Q Consensus 8 ~~~~pa~~~~~~aGLk~GD~Il~vng~~~~~~~~~~di~~~i~~~~g~~i~l~V~R~ 64 (96)
.+++||+ +|||++||+|++|||.++.. .+|.++..+++.. +.++.|+|.+.
T Consensus 39 ~~~spA~----~aGL~~GD~Il~Ing~~v~~-~~~~~~~~~l~~~-g~~v~l~v~p~ 89 (90)
T 1y7n_A 39 MRGGIAE----RGGVRVGHRIIEINGQSVVA-TPHEKIVHILSNA-VGEIHMKTMPA 89 (90)
T ss_dssp CTTSHHH----HHTCCSSCEEEEETTEECTT-SCHHHHHHHHHHC-CEEEEEEEECC
T ss_pred CCCCHHH----HcCCCCCCEEEEECCEECCC-CCHHHHHHHHHcC-CCeEEEEEEEC
Confidence 4789999 99999999999999987533 4789999999864 78999998864
No 101
>2iwn_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.35A {Homo sapiens}
Probab=99.03 E-value=3.8e-10 Score=68.65 Aligned_cols=52 Identities=17% Similarity=0.292 Sum_probs=44.0
Q ss_pred CCCCCccccccccC-CCCCCEEEEECCeecCCcccHHHHHHHHHhCCCceEEEEEEeCC
Q psy12583 8 SEGYPRQDVDVYQG-LVKDDIILEFGPINSSNFKSLQDIASTVRAGVNTDIPITVLRNE 65 (96)
Q Consensus 8 ~~~~pa~~~~~~aG-Lk~GD~Il~vng~~~~~~~~~~di~~~i~~~~g~~i~l~V~R~g 65 (96)
.+++||+ ++| |++||+|++|||.++.++ ++.++...++. .+.++.|+|.|++
T Consensus 41 ~~~s~A~----~aG~l~~GD~I~~vng~~v~~~-~~~~~~~~~~~-~~~~v~l~v~r~g 93 (97)
T 2iwn_A 41 TKSSAVE----HDGRIQIGDQIIAVDGTNLQGF-TNQQAVEVLRH-TGQTVLLTLMRRG 93 (97)
T ss_dssp CTTCHHH----HHCCCCTTCEEEEETTEECTTS-CHHHHHHHHHT-CCSEEEEEEEEEE
T ss_pred CCCChHH----hCCCCCCCCEEEEECCEECCCC-CHHHHHHHHHc-CCCeEEEEEEeCC
Confidence 4789999 999 999999999999886554 36677777776 7789999999977
No 102
>4a8c_A Periplasmic PH-dependent serine endoprotease DEGQ; chaperone, hydrolase; 7.50A {Escherichia coli} PDB: 4a8a_A 4a8b_A 4a9g_A
Probab=99.03 E-value=1e-09 Score=83.56 Aligned_cols=62 Identities=18% Similarity=0.255 Sum_probs=54.1
Q ss_pred CCCCCccccccccCCCCCCEEEEECCeecCCcccHHHHHHHHHh-CCCceEEEEEEeCCceEEEEEEeecC
Q psy12583 8 SEGYPRQDVDVYQGLVKDDIILEFGPINSSNFKSLQDIASTVRA-GVNTDIPITVLRNEGTRQRLVLRPQP 77 (96)
Q Consensus 8 ~~~~pa~~~~~~aGLk~GD~Il~vng~~~~~~~~~~di~~~i~~-~~g~~i~l~V~R~g~~~~~l~v~p~~ 77 (96)
.++|||+ +|||++||+|++|||++ +.+|.++...+.. .+|.+++++|.|++ +.+++++++..
T Consensus 271 ~~~spA~----~aGL~~GD~I~~vnG~~---v~~~~~l~~~l~~~~~g~~v~l~v~R~g-~~~~~~v~l~~ 333 (436)
T 4a8c_A 271 LPGSGSA----KAGVKAGDIITSLNGKP---LNSFAELRSRIATTEPGTKVKLGLLRNG-KPLEVEVTLDT 333 (436)
T ss_pred CCCChHH----HCCCCCCCEEEEECCEE---CCCHHHHHHHHHhcCCCCEEEEEEEECC-EEEEEEEEECC
Confidence 4789999 99999999999999966 5788899888875 45789999999999 98888888764
No 103
>1x5n_A Harmonin; PDZ domain, usher syndrome 1C protein, autoimmune enteropathy-related antigen AIE-75 ,antigen NY-CO-38/NY-CO- 37, PDZ-73 protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2kbs_A
Probab=99.03 E-value=8e-11 Score=74.24 Aligned_cols=62 Identities=18% Similarity=0.284 Sum_probs=48.0
Q ss_pred CCCCCccccccccCCCCCCEEEEECCeecCCcccHHHHHHHHHhCCCceEEEEEEeC-CceEEEEEEeecC
Q psy12583 8 SEGYPRQDVDVYQGLVKDDIILEFGPINSSNFKSLQDIASTVRAGVNTDIPITVLRN-EGTRQRLVLRPQP 77 (96)
Q Consensus 8 ~~~~pa~~~~~~aGLk~GD~Il~vng~~~~~~~~~~di~~~i~~~~g~~i~l~V~R~-g~~~~~l~v~p~~ 77 (96)
.+++||+ ++||++||+|++|||+++.++. +.++..+++.. .++.++|.|+ + +.+.+.+.+.+
T Consensus 49 ~~~s~A~----~aGL~~GD~Il~vng~~v~~~~-~~~~~~~~~~~--~~v~l~v~r~~g-~~~~~~~~~~~ 111 (114)
T 1x5n_A 49 KPGSLSA----EVGLEIGDQIVEVNGVDFSNLD-HKEAVNVLKSS--RSLTISIVAAAG-RELFMTDRSGP 111 (114)
T ss_dssp CTTSTTT----TTTCCTTCEEEEETTEETTSCC-TTHHHHHHHHC--SSEEEEECSSTT-THHHHSSCCCC
T ss_pred CCCCHHH----HcCCCCCCEEEEECCEECCCCC-HHHHHHHHhcC--CeEEEEEEcCCC-CceEEEeccCC
Confidence 4789999 9999999999999998876664 34566777754 5899999999 7 66555555443
No 104
>1wfv_A Membrane associated guanylate kinase inverted-2; atrophin-1 interacting protein 1, activin receptor interacting protein 1; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.03 E-value=2.1e-10 Score=70.83 Aligned_cols=52 Identities=13% Similarity=0.223 Sum_probs=44.2
Q ss_pred CCCCCccccccccC-CCCCCEEEEECCeecCCcccHHHHHHHHHhCCCceEEEEEEeCC
Q psy12583 8 SEGYPRQDVDVYQG-LVKDDIILEFGPINSSNFKSLQDIASTVRAGVNTDIPITVLRNE 65 (96)
Q Consensus 8 ~~~~pa~~~~~~aG-Lk~GD~Il~vng~~~~~~~~~~di~~~i~~~~g~~i~l~V~R~g 65 (96)
.+++||+ +|| |++||+|++|||.++.++ ++.++...++ ..+.++.|+|.|++
T Consensus 44 ~~~spA~----~aG~l~~GD~I~~vng~~v~~~-~~~~~~~~~~-~~g~~v~l~v~R~~ 96 (103)
T 1wfv_A 44 AEDGPAI----RNGRMRVGDQIIEINGESTRDM-THARAIELIK-SGGRRVRLLLKRGT 96 (103)
T ss_dssp CTTSHHH----HHCSSCTTCEEEEETTEECSSC-CHHHHHHHHH-HHCSEECEEEECTT
T ss_pred CCCChHH----HcCCCCCCCEEEEECCEECCCC-CHHHHHHHHH-cCCCeEEEEEEECC
Confidence 4789999 999 999999999999886554 3778878887 45789999999988
No 105
>2jik_A Synaptojanin-2 binding protein; transmembrane, outer membrane, mitochondria distribution, PDZ, membrane, scaffold, mitochondrion, membrane protein; 1.35A {Homo sapiens} PDB: 2jin_A
Probab=99.03 E-value=4.8e-10 Score=69.13 Aligned_cols=52 Identities=21% Similarity=0.231 Sum_probs=44.0
Q ss_pred CCCCCccccccccC-CCCCCEEEEECCeecCCcccHHHHHHHHHhCCCceEEEEEEeCC
Q psy12583 8 SEGYPRQDVDVYQG-LVKDDIILEFGPINSSNFKSLQDIASTVRAGVNTDIPITVLRNE 65 (96)
Q Consensus 8 ~~~~pa~~~~~~aG-Lk~GD~Il~vng~~~~~~~~~~di~~~i~~~~g~~i~l~V~R~g 65 (96)
.+++||+ +|| |++||+|++|||.++.++ ++.++..+++.. +..+.|+|.|++
T Consensus 45 ~~~spA~----~aG~L~~GD~I~~vng~~v~~~-~~~~~~~~~~~~-g~~v~l~v~R~~ 97 (101)
T 2jik_A 45 KENGAAA----LDGRLQEGDKILSVNGQDLKNL-LHQDAVDLFRNA-GYAVSLRVQHRL 97 (101)
T ss_dssp CTTSHHH----HHCCCCTTCEEEEETTEECSSC-CHHHHHHHHHTC-CSEEEEEEEEES
T ss_pred CCCCHHH----HCCCCCCCCEEEEECCEECCCC-CHHHHHHHHHhC-CCeEEEEEEeCC
Confidence 4789999 999 999999999999886554 467888888764 678999999987
No 106
>2fcf_A Multiple PDZ domain protein; adaptor molecule, protein linker, structural genomics, struc genomics consortium, SGC, structural protein; 1.76A {Homo sapiens} SCOP: b.36.1.1
Probab=99.02 E-value=4.4e-10 Score=69.41 Aligned_cols=52 Identities=21% Similarity=0.218 Sum_probs=44.4
Q ss_pred CCCCCccccccccC-CCCCCEEEEECCeecCCcccHHHHHHHHHhCCCceEEEEEEeCC
Q psy12583 8 SEGYPRQDVDVYQG-LVKDDIILEFGPINSSNFKSLQDIASTVRAGVNTDIPITVLRNE 65 (96)
Q Consensus 8 ~~~~pa~~~~~~aG-Lk~GD~Il~vng~~~~~~~~~~di~~~i~~~~g~~i~l~V~R~g 65 (96)
.+|+||+ +|| |++||+|++|||.++.+. ++.++..+++...+ ++.|+|.|..
T Consensus 47 ~~~spA~----~aG~l~~GD~I~~ing~~v~~~-~~~~~~~~l~~~~~-~v~l~v~r~~ 99 (103)
T 2fcf_A 47 LEDSPAG----KNGTLKPGDRIVEVDGMDLRDA-SHEQAVEAIRKAGN-PVVFMVQSII 99 (103)
T ss_dssp CSSSHHH----HHCCCCTTCEEEEETTEECTTC-CHHHHHHHHHTCCS-SEEEEEECCC
T ss_pred CCCCcHH----HcCCCCCCCEEEEECCEECCCC-CHHHHHHHHHhCCC-cEEEEEEECC
Confidence 4789999 999 999999999999875432 38899999998755 9999999976
No 107
>2ejy_A 55 kDa erythrocyte membrane protein; GPC, maguk, PDZ, membrane protein; NMR {Homo sapiens} PDB: 2ev8_A
Probab=99.02 E-value=3.8e-10 Score=70.33 Aligned_cols=52 Identities=27% Similarity=0.342 Sum_probs=43.2
Q ss_pred CCCCCccccccccC-CCCCCEEEEECCeecCCcccHHHHHHHHHhCCCceEEEEEEeCC
Q psy12583 8 SEGYPRQDVDVYQG-LVKDDIILEFGPINSSNFKSLQDIASTVRAGVNTDIPITVLRNE 65 (96)
Q Consensus 8 ~~~~pa~~~~~~aG-Lk~GD~Il~vng~~~~~~~~~~di~~~i~~~~g~~i~l~V~R~g 65 (96)
.+|+||+ +|| |++||+|++|||.++.+. +|+++.++++.. +.++.|+|.+..
T Consensus 44 ~~gspA~----~aG~L~~GD~Il~ING~~v~~~-~~~~~~~~l~~~-~~~v~L~V~~~~ 96 (97)
T 2ejy_A 44 LHGGMIH----RQGSLHVGDEILEINGTNVTNH-SVDQLQKAMKET-KGMISLKVIPNQ 96 (97)
T ss_dssp CSSSHHH----HHTCCCTTCEEEEETTBCCCSS-CSHHHHHHHHHC-CEEEEEEEECCC
T ss_pred CCCCHHH----HcCCCCCCCEEEEECCEECCCC-CHHHHHHHHHcC-CCeEEEEEEECC
Confidence 4789999 999 999999999999764332 589999999986 568999988753
No 108
>1wha_A KIAA0147 protein, scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.02 E-value=6.2e-10 Score=69.25 Aligned_cols=52 Identities=19% Similarity=0.276 Sum_probs=44.3
Q ss_pred CCCCCccccccccC-CCCCCEEEEECCeecCCcccHHHHHHHHHhCCCceEEEEEEeCC
Q psy12583 8 SEGYPRQDVDVYQG-LVKDDIILEFGPINSSNFKSLQDIASTVRAGVNTDIPITVLRNE 65 (96)
Q Consensus 8 ~~~~pa~~~~~~aG-Lk~GD~Il~vng~~~~~~~~~~di~~~i~~~~g~~i~l~V~R~g 65 (96)
.+++||+ ++| |++||+|++|||.++.+. ++.++..+++.. +..+.|+|.|++
T Consensus 46 ~~~spA~----~aG~L~~GD~I~~vng~~v~~~-~~~~~~~~l~~~-g~~v~l~v~R~~ 98 (105)
T 1wha_A 46 AEGGAAH----RAGTLQVGDRVLSINGVDVTEA-RHDHAVSLLTAA-SPTIALLLEREA 98 (105)
T ss_dssp CTTSSHH----HHSSCCTTCEEEEESSCBCTTC-CHHHHHHHHTSC-CSCEEEEEEECC
T ss_pred CCCCHHH----HcCCCCCCCEEEEECCEECCCC-CHHHHHHHHHcC-CCeEEEEEEECC
Confidence 4789999 999 999999999999775443 388888888875 778999999976
No 109
>2i1n_A Discs, large homolog 3; DLG3, PDZ, PDZ domain, signal transduction, structural genom structural genomics consortium, SGC, signaling protein; 1.85A {Homo sapiens} PDB: 2wl7_A 3rl7_B 1rgr_A* 1kef_A 1zok_A 1iu0_A 1iu2_A
Probab=99.02 E-value=5.4e-10 Score=69.02 Aligned_cols=54 Identities=15% Similarity=0.238 Sum_probs=45.5
Q ss_pred CCCCCccccccccC-CCCCCEEEEECCeecCCcccHHHHHHHHHhCCCceEEEEEEeCCceE
Q psy12583 8 SEGYPRQDVDVYQG-LVKDDIILEFGPINSSNFKSLQDIASTVRAGVNTDIPITVLRNEGTR 68 (96)
Q Consensus 8 ~~~~pa~~~~~~aG-Lk~GD~Il~vng~~~~~~~~~~di~~~i~~~~g~~i~l~V~R~g~~~ 68 (96)
.+++||+ +|| |++||+|++|||.++.+. ++.++..+++. .+.++.|+|.|++ ..
T Consensus 42 ~~~spA~----~aG~L~~GD~I~~vng~~v~~~-~~~~~~~~~~~-~g~~v~l~v~R~~-~~ 96 (102)
T 2i1n_A 42 IPGGAAA----MDGRLGVNDCVLRVNEVDVSEV-VHSRAVEALKE-AGPVVRLVVRRRQ-PP 96 (102)
T ss_dssp CTTSHHH----HHCCCCTTCEEEEETTEECSSC-CHHHHHHHHHH-SCSEEEEEEEEEC-CC
T ss_pred CCCCHHH----HCCCCCCCCEEEEECCEECCCC-CHHHHHHHHHc-CCCeEEEEEEeCC-CC
Confidence 4789999 999 999999999999886543 47788888887 5789999999988 43
No 110
>2vwr_A Ligand of NUMB protein X 2; protein-binding, metal-binding, zinc, LNX2_human, zinc-finger, polymorphism, ring finger protein 1; 1.3A {Homo sapiens}
Probab=99.01 E-value=5.5e-10 Score=68.16 Aligned_cols=52 Identities=19% Similarity=0.189 Sum_probs=43.7
Q ss_pred CCCCCccccccccC-CCCCCEEEEECCeecCCcccHHHHHHHHHhCCCceEEEEEEeCC
Q psy12583 8 SEGYPRQDVDVYQG-LVKDDIILEFGPINSSNFKSLQDIASTVRAGVNTDIPITVLRNE 65 (96)
Q Consensus 8 ~~~~pa~~~~~~aG-Lk~GD~Il~vng~~~~~~~~~~di~~~i~~~~g~~i~l~V~R~g 65 (96)
.+++||+ ++| |++||+|++|||.++.+. ++.++...++. .+.++.++|.|++
T Consensus 37 ~~~spA~----~aG~L~~GD~I~~vng~~v~~~-~~~~~~~~~~~-~g~~v~l~v~R~~ 89 (95)
T 2vwr_A 37 LEGGLAA----QDGRLSSNDRVLAINGHDLKYG-TPELAAQIIQA-SGERVNLTIARPG 89 (95)
T ss_dssp CTTSHHH----HHCCCCTTCEEEEETTEECTTC-CHHHHHHHHHH-CCSEEEEEEEEES
T ss_pred CCCChHH----HCCCCCCCCEEEEECCEECCCC-CHHHHHHHHHc-CCCEEEEEEEcCC
Confidence 4789999 999 999999999999886554 46777777775 4789999999987
No 111
>1m5z_A GRIP, AMPA receptor interacting protein; six beta-strands and two alpha-helices, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=99.01 E-value=6.9e-10 Score=67.12 Aligned_cols=51 Identities=16% Similarity=0.290 Sum_probs=40.9
Q ss_pred CCCCCccccccccCCCCCCEEEEECCeecCCcccHHHHHHHHHhCCCceEEEEEEeC
Q psy12583 8 SEGYPRQDVDVYQGLVKDDIILEFGPINSSNFKSLQDIASTVRAGVNTDIPITVLRN 64 (96)
Q Consensus 8 ~~~~pa~~~~~~aGLk~GD~Il~vng~~~~~~~~~~di~~~i~~~~g~~i~l~V~R~ 64 (96)
.+++||+ +|||++||+|++|||.++.++. +.++...++. .+.++.++|.|+
T Consensus 40 ~~~spA~----~aGl~~GD~I~~vng~~v~~~~-~~~~~~~~~~-~g~~v~l~v~R~ 90 (91)
T 1m5z_A 40 RPAGPGD----LGGLKPYDRLLQVNHVRTRDFD-CCLVVPLIAE-SGNKLDLVISRN 90 (91)
T ss_dssp CTTSHHH----HHTCCTTCEEEEETTEECTTCC-HHHHHHHHHT-STTEEEEEEEEC
T ss_pred CCCCHHH----HcCCCCCCEEEEECCEECCCCC-HHHHHHHHHc-CCCEEEEEEEeC
Confidence 4789999 9999999999999998865543 4455566664 478999999996
No 112
>2dm8_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=99.01 E-value=6e-10 Score=70.24 Aligned_cols=54 Identities=24% Similarity=0.308 Sum_probs=45.6
Q ss_pred CCCCCccccccccC-CCCCCEEEEECCeecCCcccHHHHHHHHHhCCCceEEEEEEeCCceE
Q psy12583 8 SEGYPRQDVDVYQG-LVKDDIILEFGPINSSNFKSLQDIASTVRAGVNTDIPITVLRNEGTR 68 (96)
Q Consensus 8 ~~~~pa~~~~~~aG-Lk~GD~Il~vng~~~~~~~~~~di~~~i~~~~g~~i~l~V~R~g~~~ 68 (96)
.+++||+ +|| |++||+|++|||.++.++ ++.++..+++... .++.|+|.|++ ..
T Consensus 51 ~~~spA~----~aG~L~~GD~I~~vng~~v~~~-~~~~~~~~l~~~~-~~v~l~v~R~~-~~ 105 (116)
T 2dm8_A 51 YEEGAAA----RDGRLWAGDQILEVNGVDLRNS-SHEEAITALRQTP-QKVRLVVYRDE-AH 105 (116)
T ss_dssp CSSSHHH----HHTCCCTTCEEEEETTEECSSS-CHHHHHHHHHTCC-SEEEEEEECCS-SC
T ss_pred CCCChHH----hCCCCCCCCEEEEECCEECCCC-CHHHHHHHHHhCC-CeEEEEEEeCC-cc
Confidence 4789999 999 999999999999886554 3788888888655 79999999988 53
No 113
>1ujv_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics, KIAA0705 protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.01 E-value=1e-09 Score=67.59 Aligned_cols=46 Identities=20% Similarity=0.406 Sum_probs=40.7
Q ss_pred ccCCCCCCEEEEECCeecCCcccHHHHHHHHHhCC-CceEEEEEEeCC
Q psy12583 19 YQGLVKDDIILEFGPINSSNFKSLQDIASTVRAGV-NTDIPITVLRNE 65 (96)
Q Consensus 19 ~aGLk~GD~Il~vng~~~~~~~~~~di~~~i~~~~-g~~i~l~V~R~g 65 (96)
++||++||+|++|||.++.++ +|.++.++|+..+ +.++.|+|.|++
T Consensus 45 ~aGL~~GD~I~~vng~~v~~~-~~~~~~~~l~~~~~g~~v~l~v~R~g 91 (96)
T 1ujv_A 45 CPGLCEGDLIVEINQQNVQNL-SHTEVVDILKDCPIGSETSLIIHRGS 91 (96)
T ss_dssp STTCCSSCEEEEETTEECSSC-CHHHHHHHHHHSCTTSEEEEEEECCS
T ss_pred cCCCCCCCEEEEECCEECCCC-CHHHHHHHHHcCCCCCEEEEEEEECC
Confidence 799999999999999886554 5789999999875 899999999987
No 114
>1p1d_A PDZ45, glutamate receptor interacting protein; PDZ domain, tandem repeats, scaffold protein, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1 b.36.1.1 PDB: 1p1e_A 1x5r_A
Probab=99.00 E-value=7.7e-10 Score=75.47 Aligned_cols=53 Identities=11% Similarity=0.267 Sum_probs=45.9
Q ss_pred CCCCCccccccccC-CCCCCEEEEECCeecCCcccHHHHHHHHHhCC-CceEEEEEEeCC
Q psy12583 8 SEGYPRQDVDVYQG-LVKDDIILEFGPINSSNFKSLQDIASTVRAGV-NTDIPITVLRNE 65 (96)
Q Consensus 8 ~~~~pa~~~~~~aG-Lk~GD~Il~vng~~~~~~~~~~di~~~i~~~~-g~~i~l~V~R~g 65 (96)
.+|+||+ +|| |++||+|++|||.++.+ .+|.++..+++... +.+++++|.|++
T Consensus 44 ~~~spA~----~aG~l~~GD~I~~vng~~v~~-~~~~~~~~~l~~~~~g~~v~l~v~R~~ 98 (196)
T 1p1d_A 44 EADSPAE----RCGVLQIGDRVMAINGIPTED-STFEEANQLLRDSSITSKVTLEIEFDV 98 (196)
T ss_dssp CTTSHHH----HTSCCCSSCCEEEETTBCSTT-SCHHHHHHHHHTCCSSSEEEEEEEECS
T ss_pred CCCCHHH----HcCCCCCCCEEEEECCEECCC-CCHHHHHHHHHhCCCCCeEEEEEEecC
Confidence 4789999 999 99999999999976432 16899999999876 789999999988
No 115
>3axa_A Afadin, nectin-3, protein AF-6; PDZ domain, fusion protein, cell adhesion; 2.78A {Mus musculus} PDB: 1xz9_A 2exg_A* 1t2m_A 2ain_A
Probab=99.00 E-value=7.5e-10 Score=68.89 Aligned_cols=52 Identities=15% Similarity=0.215 Sum_probs=44.7
Q ss_pred CCCCCccccccccC-CCCCCEEEEECCeecCCcccHHHHHHHHHhCCCceEEEEEEeCC
Q psy12583 8 SEGYPRQDVDVYQG-LVKDDIILEFGPINSSNFKSLQDIASTVRAGVNTDIPITVLRNE 65 (96)
Q Consensus 8 ~~~~pa~~~~~~aG-Lk~GD~Il~vng~~~~~~~~~~di~~~i~~~~g~~i~l~V~R~g 65 (96)
.+++||+ ++| |++||+|++|||.++.+. ++.++..+++. .+.++.|+|.|++
T Consensus 46 ~~~spA~----~aG~L~~GD~I~~ing~~v~~~-~~~~~~~~~~~-~g~~v~l~v~R~~ 98 (106)
T 3axa_A 46 VKGGAAD----VDGRLAAGDQLLSVDGRSLVGL-SQERAAELMTR-TSSVVTLEVAKQG 98 (106)
T ss_dssp BTTSHHH----HHCCCCTTCEEEEETTEECTTC-CHHHHHHHHHT-CCSEEEEEEECCC
T ss_pred CCCCHHH----HcCCCCCCCEEEEECCEECCCC-CHHHHHHHHHc-CCCeEEEEEEeCC
Confidence 4789999 999 999999999999886543 67788888876 6789999999988
No 116
>1wi2_A Riken cDNA 2700099C19; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=99.00 E-value=5.6e-10 Score=69.44 Aligned_cols=51 Identities=12% Similarity=0.177 Sum_probs=43.9
Q ss_pred CCCCCccccccccCCCCCCEEEEECCeecCCcccHHHHHHHHHhCCCceEEEEEEeCC
Q psy12583 8 SEGYPRQDVDVYQGLVKDDIILEFGPINSSNFKSLQDIASTVRAGVNTDIPITVLRNE 65 (96)
Q Consensus 8 ~~~~pa~~~~~~aGLk~GD~Il~vng~~~~~~~~~~di~~~i~~~~g~~i~l~V~R~g 65 (96)
.+++||+ +|||++||+|++|||.++.+. ++.++.++++. +.++.|+|+|+.
T Consensus 49 ~~~spA~----~aGL~~GD~I~~ing~~v~~~-~~~~~~~~l~~--~~~v~l~v~r~~ 99 (104)
T 1wi2_A 49 IPDSDAH----RAGLQEGDQVLAVNDVDFQDI-EHSKAVEILKT--AREISMRVRFFS 99 (104)
T ss_dssp CTTSHHH----HHTCCTTCEEEEETTEECSSC-CHHHHHHHHHH--SSSEEEEEECCC
T ss_pred CCCChHH----HcCCCCCCEEEEECCEECCCC-CHHHHHHHHhC--CCEEEEEEEECC
Confidence 4789999 999999999999999875442 48899999987 678999999976
No 117
>2edv_A FERM and PDZ domain-containing protein 1; cytoskeletal-associated protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.00 E-value=1.2e-09 Score=67.20 Aligned_cols=51 Identities=22% Similarity=0.328 Sum_probs=43.1
Q ss_pred CCCCCccccccccCCCCCCEEEEECCeecCCcccHHHHHHHHHhCCCceEEEEEEeCC
Q psy12583 8 SEGYPRQDVDVYQGLVKDDIILEFGPINSSNFKSLQDIASTVRAGVNTDIPITVLRNE 65 (96)
Q Consensus 8 ~~~~pa~~~~~~aGLk~GD~Il~vng~~~~~~~~~~di~~~i~~~~g~~i~l~V~R~g 65 (96)
.+++||+ +||++||+|++|||.++.+. +|.++...++. .+.++.|+|.|++
T Consensus 39 ~~~spA~-----agL~~GD~Il~ing~~v~~~-~~~~~~~~~~~-~g~~v~l~v~R~~ 89 (96)
T 2edv_A 39 TAGGSAH-----GKLFPGDQILQMNNEPAEDL-SWERAVDILRE-AEDSLSITVVRCT 89 (96)
T ss_dssp CSSSSST-----TTSCTTCBEEEESSCBSTTC-CHHHHHHHHHH-CSSCEEEEEEECC
T ss_pred CCCCchh-----hCCCCCCEEEEECCEECCCC-CHHHHHHHHHc-CCCeEEEEEEECC
Confidence 4789996 89999999999999876544 57788888887 6789999999976
No 118
>2q9v_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; Cys Ser mutant, S genomics consortium, SGC, transferase; 2.00A {Homo sapiens}
Probab=99.00 E-value=3.2e-10 Score=68.53 Aligned_cols=53 Identities=15% Similarity=0.128 Sum_probs=44.1
Q ss_pred CCCCCccccccccC-CCCCCEEEEECCeecCCcccHHHHHHHHHhCCC-ceEEEEEEeCC
Q psy12583 8 SEGYPRQDVDVYQG-LVKDDIILEFGPINSSNFKSLQDIASTVRAGVN-TDIPITVLRNE 65 (96)
Q Consensus 8 ~~~~pa~~~~~~aG-Lk~GD~Il~vng~~~~~~~~~~di~~~i~~~~g-~~i~l~V~R~g 65 (96)
.+++||+ +|| |++||+|++|||.++.+ .++.++..+++..+. .++.|+|.|..
T Consensus 35 ~~~spA~----~aG~L~~GD~I~~ing~~v~~-~~~~~~~~~l~~~~~~~~v~l~v~R~~ 89 (90)
T 2q9v_A 35 VPLGAAD----TDGRLRSGDELISVDGTPVIG-KSHQLVVQLMQQAAKQGHVNLTVRQTR 89 (90)
T ss_dssp CTTSHHH----HHCCCCTTCEEEEETTEECTT-SCHHHHHHHHHHHHHHTEEEEEEEECC
T ss_pred CCCChHH----HCCCCCCCCEEEEECCEECCC-CCHHHHHHHHHhCCCCCeEEEEEEecc
Confidence 4789999 999 99999999999987544 468888888887653 48999999964
No 119
>3qe1_A Sorting nexin-27, G protein-activated inward RECT potassium channel 3 chimera; PDZ domain, PDZ binding, GIRK3 regulation, early endosomes; 1.68A {Rattus norvegicus} SCOP: b.36.1.0 PDB: 3qdo_A 3qgl_A
Probab=98.99 E-value=7.6e-10 Score=68.86 Aligned_cols=52 Identities=27% Similarity=0.362 Sum_probs=44.6
Q ss_pred CCCCCccccccccCCCCCCEEEEECCeecCCcccHHHHHHHHHhCCCceEEEEEEeCC
Q psy12583 8 SEGYPRQDVDVYQGLVKDDIILEFGPINSSNFKSLQDIASTVRAGVNTDIPITVLRNE 65 (96)
Q Consensus 8 ~~~~pa~~~~~~aGLk~GD~Il~vng~~~~~~~~~~di~~~i~~~~g~~i~l~V~R~g 65 (96)
.+++||+ +|||++||+|++|||.++.. .+|.++..+++. .+..+.|+|.|.+
T Consensus 51 ~~~spA~----~aGl~~GD~I~~ing~~v~~-~~~~~~~~~l~~-~g~~v~l~v~r~~ 102 (107)
T 3qe1_A 51 LPGGAAD----RAGVRKGDRILEVNGVNVEG-ATHKQVVDLIRA-GEKELILTVLSVE 102 (107)
T ss_dssp CTTSHHH----HHTCCTTCEEEEETTEECTT-CCHHHHHHHHHH-CSSEEEEEEECSS
T ss_pred CCCCHHH----HcCCCCCCEEEEECCEECCC-CCHHHHHHHHHc-CCCEEEEEEEcCC
Confidence 4789999 99999999999999987543 278899999986 4789999999976
No 120
>1qav_A Alpha-1 syntrophin (residues 77-171); beta-finger, heterodimer, membrane protein-oxidoreductase CO; 1.90A {Mus musculus} SCOP: b.36.1.1 PDB: 1z86_A 2pdz_A 2vrf_A
Probab=98.99 E-value=8.3e-10 Score=66.73 Aligned_cols=51 Identities=14% Similarity=0.178 Sum_probs=42.8
Q ss_pred CCCCCcccccccc-CCCCCCEEEEECCeecCCcccHHHHHHHHHhCCCceEEEEEEeC
Q psy12583 8 SEGYPRQDVDVYQ-GLVKDDIILEFGPINSSNFKSLQDIASTVRAGVNTDIPITVLRN 64 (96)
Q Consensus 8 ~~~~pa~~~~~~a-GLk~GD~Il~vng~~~~~~~~~~di~~~i~~~~g~~i~l~V~R~ 64 (96)
.+++||+ +| ||++||+|++|||.++.+. ++.++...++.. +.++.++|+|-
T Consensus 38 ~~~spA~----~aggl~~GD~I~~ing~~v~~~-~~~~~~~~~~~~-~~~v~l~v~r~ 89 (90)
T 1qav_A 38 FKGLAAD----QTEALFVGDAILSVNGEDLSSA-THDEAVQALKKT-GKEVVLEVKYM 89 (90)
T ss_dssp CTTSHHH----HTTCCCTTEEEEEETTEECTTC-CHHHHHHHHHTC-CSEEEEEEEEC
T ss_pred CCCCHHH----hcCCCCCCCEEEEECCEECCCC-CHHHHHHHHHhC-CCeEEEEEEEe
Confidence 4789999 99 9999999999999886554 677888888765 67899999883
No 121
>3r0h_A INAD, inactivation-NO-after-potential D protein; protein-protein complex, PDZ domain, peptide binding protein; 2.60A {Drosophila melanogaster}
Probab=98.99 E-value=1.1e-09 Score=74.63 Aligned_cols=54 Identities=11% Similarity=0.003 Sum_probs=44.8
Q ss_pred CCCCCccccccccC-CCCCCEEEEECCeecCCc-ccHHHHHHHHHhCCCceEEEEEEeCC
Q psy12583 8 SEGYPRQDVDVYQG-LVKDDIILEFGPINSSNF-KSLQDIASTVRAGVNTDIPITVLRNE 65 (96)
Q Consensus 8 ~~~~pa~~~~~~aG-Lk~GD~Il~vng~~~~~~-~~~~di~~~i~~~~g~~i~l~V~R~g 65 (96)
.+++||+ +|| |++||+|++|||+++.+| .+|.++...++...+.++.|+|.|++
T Consensus 53 ~~~spA~----~aG~L~~GD~Il~vng~~v~~~~~~~~~~~~~~~~~~~~~v~l~v~R~~ 108 (206)
T 3r0h_A 53 YPEGQVA----ADKRLKIFDHICDINGTPIHVGSMTTLKVHQLFHTTYEKAVTLTVFRAD 108 (206)
T ss_dssp CTTSHHH----HHCCCCTTCEEEEETTEECCGGGSCHHHHHHHHHSCCSSEEEEEEECCS
T ss_pred CCCChHH----hcCCCCCCCEEEEECCEEcCCCccCHHHHHHHHHhcCCCceEEEEEecc
Confidence 4789999 998 999999999999886552 24778888888766666999999987
No 122
>1q7x_A PDZ2B domain of PTP-BAS (HPTP1E); phosphatase, structural proteomics in europe, spine, structural genomics, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.99 E-value=6.5e-10 Score=69.39 Aligned_cols=52 Identities=12% Similarity=0.170 Sum_probs=44.8
Q ss_pred CCCCCccccccccC-CCCCCEEEEECCeecCCcccHHHHHHHHHhCCCceEEEEEEeCC
Q psy12583 8 SEGYPRQDVDVYQG-LVKDDIILEFGPINSSNFKSLQDIASTVRAGVNTDIPITVLRNE 65 (96)
Q Consensus 8 ~~~~pa~~~~~~aG-Lk~GD~Il~vng~~~~~~~~~~di~~~i~~~~g~~i~l~V~R~g 65 (96)
.+++||+ ++| |++||+|++|||.++.+. ++.++..+++.. +.++.|+|.|++
T Consensus 50 ~~~spA~----~aG~L~~GD~I~~vng~~v~~~-~~~~~~~~~~~~-g~~v~l~v~R~~ 102 (108)
T 1q7x_A 50 IPQGAAE----SDGRIHKGDRVLAVNGVSLEGA-THKQAVETLRNT-GQVVHLLLEKGQ 102 (108)
T ss_dssp CTTSTHH----HHTCCCSSCEEEEETTEECBSC-TTSHHHHHHHHT-TSEEEEEEECCC
T ss_pred CCCChHH----HCCCCCCCCEEEEECCEECCCC-CHHHHHHHHHcC-CCeEEEEEEeCC
Confidence 4789999 999 999999999999886544 677888888874 789999999987
No 123
>2qg1_A Multiple PDZ domain protein; MPDZ, MUPP1, structural genomics, structural genomics consortium, SGC, signaling protein; 1.40A {Homo sapiens}
Probab=98.99 E-value=1e-09 Score=66.52 Aligned_cols=52 Identities=19% Similarity=0.229 Sum_probs=43.5
Q ss_pred CCCCCccccccccC-CCCCCEEEEECCeecCCcccHHHHHHHHHhCCCceEEEEEEeCC
Q psy12583 8 SEGYPRQDVDVYQG-LVKDDIILEFGPINSSNFKSLQDIASTVRAGVNTDIPITVLRNE 65 (96)
Q Consensus 8 ~~~~pa~~~~~~aG-Lk~GD~Il~vng~~~~~~~~~~di~~~i~~~~g~~i~l~V~R~g 65 (96)
.+++||+ ++| |++||+|++|||+++.+. ++.++...++.. +.++.++|.|.+
T Consensus 37 ~~~spA~----~aG~L~~GD~I~~vng~~v~~~-~~~~~~~~~~~~-~~~v~l~v~R~~ 89 (92)
T 2qg1_A 37 VKGGIAD----ADGRLMQGDQILMVNGEDVRNA-TQEAVAALLKCS-LGTVTLEVGRIS 89 (92)
T ss_dssp CTTSHHH----HHTCCCTTCEEEEETTEECTTC-CHHHHHHHHHHC-CSEEEEEEECCC
T ss_pred CCCCHHH----HcCCCCCCCEEEEECCEECCCC-CHHHHHHHHHcC-CCeEEEEEEccc
Confidence 4789999 999 999999999999886554 367777777764 568999999976
No 124
>2byg_A Channel associated protein of synapse-110; DLG2, PDZ, PDZ domain, structural genomics, structural genom consortium, SGC, phosphorylation; 1.85A {Homo sapiens} SCOP: b.36.1.1
Probab=98.98 E-value=5.3e-10 Score=71.26 Aligned_cols=52 Identities=13% Similarity=0.173 Sum_probs=44.7
Q ss_pred CCCCCccccccccC-CCCCCEEEEECCeecCCcccHHHHHHHHHhCCCceEEEEEEeCC
Q psy12583 8 SEGYPRQDVDVYQG-LVKDDIILEFGPINSSNFKSLQDIASTVRAGVNTDIPITVLRNE 65 (96)
Q Consensus 8 ~~~~pa~~~~~~aG-Lk~GD~Il~vng~~~~~~~~~~di~~~i~~~~g~~i~l~V~R~g 65 (96)
.+|+||+ ++| |++||+|++|||.++... ++.++...++.. +..+.|+|.|++
T Consensus 62 ~~gspA~----~aG~L~~GD~Il~Vng~~v~~~-~~~~~~~~l~~~-g~~v~l~v~R~~ 114 (117)
T 2byg_A 62 IDGGAAQ----KDGRLQVGDRLLMVNNYSLEEV-THEEAVAILKNT-SEVVYLKVGKPT 114 (117)
T ss_dssp CTTSHHH----HHCCCCTTCEEEEETTEECTTC-CHHHHHHHHHTC-CSEEEEEEEEEE
T ss_pred CCCCHHH----HcCCCCCCCEEEEECCEECCCC-CHHHHHHHHHcC-CCeEEEEEEeCC
Confidence 4789999 999 999999999999886443 678888888865 689999999976
No 125
>1r6j_A Syntenin 1; PDZ, membrane protein; 0.73A {Homo sapiens} SCOP: b.36.1.1 PDB: 1nte_A 1obx_A 1oby_A
Probab=98.98 E-value=6.1e-10 Score=67.68 Aligned_cols=50 Identities=20% Similarity=0.234 Sum_probs=42.6
Q ss_pred CCCCCccccccccCCCCCCEEEEECCeecCCcccHHHHHHHHHhCCCceEEEEEEe
Q psy12583 8 SEGYPRQDVDVYQGLVKDDIILEFGPINSSNFKSLQDIASTVRAGVNTDIPITVLR 63 (96)
Q Consensus 8 ~~~~pa~~~~~~aGLk~GD~Il~vng~~~~~~~~~~di~~~i~~~~g~~i~l~V~R 63 (96)
.+|+||+ +|||++||+|++|||+++... +.+++.+.|+ +.+..++|+|..
T Consensus 31 ~~gspA~----~aGl~~GD~Il~VNG~~v~~~-~~~evv~llr-~~g~~V~L~v~p 80 (82)
T 1r6j_A 31 VKDSSAA----RNGLLTEHNICEINGQNVIGL-KDSQIADILS-TSGTVVTITIMP 80 (82)
T ss_dssp CTTSHHH----HHTCCSSEEEEEETTEECTTC-CHHHHHHHHH-HSCSEEEEEEEE
T ss_pred cCCCHHH----HcCCCCCCEEEEECCEEcCCC-CHHHHHHHHh-cCCCEEEEEEEe
Confidence 4799999 999999999999999986554 5788999999 567788888764
No 126
>4fgm_A Aminopeptidase N family protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, peptidase_M61, PDZ; 2.39A {Idiomarina loihiensis L2TR}
Probab=98.98 E-value=1.3e-09 Score=86.22 Aligned_cols=61 Identities=16% Similarity=0.164 Sum_probs=52.5
Q ss_pred CCCCCccccccccCCCCCCEEEEECCeecCCcccHHHHHHHHHh-CCCceEEEEEEeCCceEEEEEEeecC
Q psy12583 8 SEGYPRQDVDVYQGLVKDDIILEFGPINSSNFKSLQDIASTVRA-GVNTDIPITVLRNEGTRQRLVLRPQP 77 (96)
Q Consensus 8 ~~~~pa~~~~~~aGLk~GD~Il~vng~~~~~~~~~~di~~~i~~-~~g~~i~l~V~R~g~~~~~l~v~p~~ 77 (96)
.+||||+ +|||++||+|++|||.++ + +.++.++++. .+|.+++|+|.|+| +.+++++++..
T Consensus 504 ~~~spA~----~AGL~~GD~I~aInG~~v-~---~~~l~~~l~~~~~g~~v~l~v~R~g-~~~~~~v~l~~ 565 (597)
T 4fgm_A 504 YHDESAY----HAGLSAGDKIIAIDHLQA-T---EQSVKRILERYIPGDTVTIHAFRRD-ELMTLELTWQE 565 (597)
T ss_dssp CTTSHHH----HHTCCTTCEEEEETTEEC-C---TTTHHHHHTTCCTTCEEEEEEEETT-EEEEEEEECCC
T ss_pred CCCChHH----HCCCCCCCEEEEECCEEC-C---HHHHHHHHHhcCCCCEEEEEEEECC-EEEEEEEEecC
Confidence 4789999 999999999999999875 2 4566777875 57899999999999 99999998874
No 127
>2cs5_A Tyrosine-protein phosphatase, non-receptor type 4; PDZ domain, ptpase, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.98 E-value=6.1e-10 Score=70.69 Aligned_cols=53 Identities=13% Similarity=0.221 Sum_probs=44.8
Q ss_pred CCCCCcccccccc--CCCCCCEEEEECCeecCCcccHHHHHHHHHhCCC---ceEEEEEEeCC
Q psy12583 8 SEGYPRQDVDVYQ--GLVKDDIILEFGPINSSNFKSLQDIASTVRAGVN---TDIPITVLRNE 65 (96)
Q Consensus 8 ~~~~pa~~~~~~a--GLk~GD~Il~vng~~~~~~~~~~di~~~i~~~~g---~~i~l~V~R~g 65 (96)
.+++||+ +| ||++||+|++|||.++.+. ++.++..+++...+ .++.|+|.|+.
T Consensus 49 ~~~spA~----~a~gGL~~GD~Il~ing~~v~~~-~~~~~~~~~~~~~~~~~~~v~l~v~R~~ 106 (119)
T 2cs5_A 49 APGTPAD----LCVPRLNEGDQVVLINGRDIAEH-THDQVVLFIKASCERHSGELMLLVRPNA 106 (119)
T ss_dssp CSSSTTT----SSSSCCCTTCEEEEETTBCTTSS-CHHHHHHHHHHHHHCCSSCEEEEEECCC
T ss_pred CCCCHHH----HhhcCCCCCCEEEEECCEECCCC-CHHHHHHHHHhccccCCCEEEEEEEccc
Confidence 4789999 99 9999999999999876554 67888888887543 58999999987
No 128
>3o46_A Maguk P55 subfamily member 7; PDZ domain, structural genomics consortium, SGC, protein BIN; 1.30A {Homo sapiens} SCOP: b.36.1.0
Probab=98.97 E-value=8.7e-10 Score=67.10 Aligned_cols=52 Identities=15% Similarity=0.224 Sum_probs=44.3
Q ss_pred CCCCCccccccccC-CCCCCEEEEECCeecCCcccHHHHHHHHHhCCCceEEEEEEeCC
Q psy12583 8 SEGYPRQDVDVYQG-LVKDDIILEFGPINSSNFKSLQDIASTVRAGVNTDIPITVLRNE 65 (96)
Q Consensus 8 ~~~~pa~~~~~~aG-Lk~GD~Il~vng~~~~~~~~~~di~~~i~~~~g~~i~l~V~R~g 65 (96)
.+|+||+ ++| |++||+|++|||.++.. .+|.++..+++...+ ++.|+|.|..
T Consensus 36 ~~gspA~----~aG~L~~GD~I~~ing~~v~~-~~~~~~~~~l~~~~~-~v~l~v~~~~ 88 (93)
T 3o46_A 36 MRGGAAD----RSGLIHVGDELREVNGIPVED-KRPEEIIQILAQSQG-AITFKIIPGS 88 (93)
T ss_dssp CTTSHHH----HHTCCCTTCEEEEETTEESTT-SCHHHHHHHHHHCCE-EEEEEEECC-
T ss_pred CCCCHHH----HcCCCCCCCEEEEECCEECCC-CCHHHHHHHHHhCCC-eEEEEEEeCC
Confidence 4789999 999 99999999999987533 578999999998765 8999999865
No 129
>1x6d_A Interleukin-16; PDZ domain, lymphocyte chemoattractant factor (LCF), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=98.96 E-value=1.9e-10 Score=73.03 Aligned_cols=57 Identities=14% Similarity=0.126 Sum_probs=48.2
Q ss_pred CCCCCccccccccC-CCCCCEEEEECCeecCCcccHHHHHHHHHhCCCceEEEEEEeCCceEEE
Q psy12583 8 SEGYPRQDVDVYQG-LVKDDIILEFGPINSSNFKSLQDIASTVRAGVNTDIPITVLRNEGTRQR 70 (96)
Q Consensus 8 ~~~~pa~~~~~~aG-Lk~GD~Il~vng~~~~~~~~~~di~~~i~~~~g~~i~l~V~R~g~~~~~ 70 (96)
.+++||+ +|| |++||+|++|||+++... +|.++..+++..++..+.+++.|++ +...
T Consensus 50 ~~~spA~----~aG~L~~GD~Il~ing~~v~~~-~~~~~~~~l~~~~~~~~~l~v~R~~-~~~~ 107 (119)
T 1x6d_A 50 FPNGLAS----QEGTIQKGNEVLSINGKSLKGT-THHDALAILRQAREPRQAVIVTRKL-TPEA 107 (119)
T ss_dssp CSSSHHH----HHTSSCTTCBCCEETTEECSSC-CHHHHHHHHHHTTSSSEEEEEEECC-CSSS
T ss_pred CCCChHH----HcCCCCCCCEEEEECCEECCCC-CHHHHHHHHHhCCCCeEEEEEEcCC-Cccc
Confidence 4789999 999 999999999999886433 6889999999888888889999988 5443
No 130
>2qbw_A PDZ-fibronectin fusion protein; fibronectin PDZ, unknown function; 1.80A {Homo sapiens} PDB: 3ch8_A
Probab=98.96 E-value=5.4e-09 Score=70.77 Aligned_cols=61 Identities=16% Similarity=0.193 Sum_probs=49.6
Q ss_pred CCCCCccccccccCCCCCCEEEEECCeecCCcccHHHHHHHHHhCCCceEEEEEEe---CCceEEEEEEeec
Q psy12583 8 SEGYPRQDVDVYQGLVKDDIILEFGPINSSNFKSLQDIASTVRAGVNTDIPITVLR---NEGTRQRLVLRPQ 76 (96)
Q Consensus 8 ~~~~pa~~~~~~aGLk~GD~Il~vng~~~~~~~~~~di~~~i~~~~g~~i~l~V~R---~g~~~~~l~v~p~ 76 (96)
.+|+||+ + ||++||+|++|||.++.+.. +.++...++... ..+.|+|.| ++ +...+.+...
T Consensus 32 ~~~spA~----~-gl~~GD~I~~vng~~v~~~~-~~~~~~~~~~~~-~~v~l~v~r~~~~G-~~~~~~v~~~ 95 (195)
T 2qbw_A 32 QPEGPAS----K-LLQPGDKIIQANGYSFINIE-HGQAVSLLKTFQ-NTVELIIVREVGNG-AKQEIRVRVE 95 (195)
T ss_dssp CTTSTTT----T-TCCTTCEEEEETTEECTTCC-HHHHHHHHHHCC-SEEEEEEEEECSSS-CEEEEEEEEE
T ss_pred CCCChHH----h-CCCCCCEEEEECCEECCCCC-HHHHHHHHHcCC-CeEEEEEEEcCCCC-CCceeEeEee
Confidence 4789999 9 99999999999998876654 677777787765 499999999 88 7777666554
No 131
>1wg6_A Hypothetical protein (riken cDNA 2810455B10); structural genomics, PDZ domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.36.1.1 PDB: 2koh_A 2k1z_A 2k20_A
Probab=98.95 E-value=7.8e-10 Score=71.40 Aligned_cols=53 Identities=19% Similarity=0.211 Sum_probs=45.5
Q ss_pred CCCCCccccccccC-CCCCCEEEEECCeecCCcccHHHHHHHHHhC------CCceEEEEEEeCC
Q psy12583 8 SEGYPRQDVDVYQG-LVKDDIILEFGPINSSNFKSLQDIASTVRAG------VNTDIPITVLRNE 65 (96)
Q Consensus 8 ~~~~pa~~~~~~aG-Lk~GD~Il~vng~~~~~~~~~~di~~~i~~~------~g~~i~l~V~R~g 65 (96)
.+|+||+ ++| |++||+|++|||+.+... +|.++.++|+.. ++.+|+|+|.|++
T Consensus 63 ~~gspA~----~aG~L~~GD~Il~Vng~~v~~~-~~~~~~~~l~~~~~~~g~~~~~v~l~v~R~~ 122 (127)
T 1wg6_A 63 IHGGAAF----KDGRLRMNDQLIAVNGETLLGK-SNHEAMETLRRSMSMEGNIRGMIQLVILRRS 122 (127)
T ss_dssp CSSSSTH----HHHTSCSCCBEEEETTEESTTS-CHHHHHHHHHHHHHHHHHHTCEEEEEEEECS
T ss_pred CCCCHHH----HCCCCCCCCEEEEECCEECCCC-CHHHHHHHHHHhhccccCCCCEEEEEEEeCC
Confidence 5789999 999 999999999999886553 588888999864 4679999999987
No 132
>1v62_A KIAA1719 protein; structural genomics, synaptic transmission, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.95 E-value=7.7e-10 Score=70.35 Aligned_cols=52 Identities=15% Similarity=0.197 Sum_probs=45.5
Q ss_pred CCCCCccccccccC-CCCCCEEEEECCeecCCcccHHHHHHHHHhCCCceEEEEEEeCC
Q psy12583 8 SEGYPRQDVDVYQG-LVKDDIILEFGPINSSNFKSLQDIASTVRAGVNTDIPITVLRNE 65 (96)
Q Consensus 8 ~~~~pa~~~~~~aG-Lk~GD~Il~vng~~~~~~~~~~di~~~i~~~~g~~i~l~V~R~g 65 (96)
.+|+||+ ++| |++||+|++|||+++.. .+++++.++++. .+..+.|+|.|++
T Consensus 50 ~~~spA~----~aG~l~~GD~Il~Ing~~v~~-~~~~~~~~~l~~-~g~~v~l~v~r~~ 102 (117)
T 1v62_A 50 KPASVVD----RSGALHPGDHILSIDGTSMEH-CSLLEATKLLAS-ISEKVRLEILPVP 102 (117)
T ss_dssp CTTSHHH----HHTCCCTTCBEEEETTEETTS-CCHHHHHHHHHS-CSSEEEEEECCBT
T ss_pred CCCCHHH----HcCCCCCCCEEEEECCEECCC-CCHHHHHHHHHh-CCCeEEEEEEECC
Confidence 4789999 999 99999999999987533 478999999994 6889999999988
No 133
>3hpk_A Protein interacting with PRKCA 1; oxidized, PDZ domain, kinase, protein binding; 2.20A {Rattus norvegicus} PDB: 3hpm_A
Probab=98.94 E-value=1.4e-09 Score=69.59 Aligned_cols=52 Identities=12% Similarity=0.153 Sum_probs=43.9
Q ss_pred CCCCCccccccccC-CCCCCEEEEECCeecCCcccHHHHHHHHHhCCCceEEEEEEeCC
Q psy12583 8 SEGYPRQDVDVYQG-LVKDDIILEFGPINSSNFKSLQDIASTVRAGVNTDIPITVLRNE 65 (96)
Q Consensus 8 ~~~~pa~~~~~~aG-Lk~GD~Il~vng~~~~~~~~~~di~~~i~~~~g~~i~l~V~R~g 65 (96)
.+|+||+ +|| |++||+|++|||.++... +|.++..+++...+ .+.++|.|..
T Consensus 53 ~~gspA~----~aG~L~~GD~Il~ing~~v~~~-~~~~~~~~l~~~~~-~v~l~v~r~~ 105 (125)
T 3hpk_A 53 FDNTPAA----LDGTVAAGDEITGVNGRSIKGK-TKVEVAKMIQEVKG-EVTIHYNKLQ 105 (125)
T ss_dssp CTTSHHH----HHCCCCTTCEEEEETTEECTTC-CHHHHHHHHHHSCS-EEEEEEEEEC
T ss_pred CCCCHHH----HCCCCCCCCEEEEECCEECCCC-CHHHHHHHHHcCCC-eEEEEEEECC
Confidence 4789999 999 999999999999885443 68899999998765 5999999843
No 134
>2dkr_A LIN-7 homolog B; LIN-7B, PDZ, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.94 E-value=1.1e-09 Score=66.38 Aligned_cols=52 Identities=13% Similarity=0.185 Sum_probs=43.7
Q ss_pred CCCCCccccccccC-CCCCCEEEEECCeecCCcccHHHHHHHHHhCCCceEEEEEEeCC
Q psy12583 8 SEGYPRQDVDVYQG-LVKDDIILEFGPINSSNFKSLQDIASTVRAGVNTDIPITVLRNE 65 (96)
Q Consensus 8 ~~~~pa~~~~~~aG-Lk~GD~Il~vng~~~~~~~~~~di~~~i~~~~g~~i~l~V~R~g 65 (96)
.+++||+ +|| |++||+|++|||.++.++ ++.++..+++... .++.|+|.|+.
T Consensus 38 ~~~spA~----~aGgl~~GD~I~~vng~~v~~~-~~~~~~~~~~~~~-~~v~l~v~r~~ 90 (93)
T 2dkr_A 38 IPGGVAD----RHGGLKRGDQLLSVNGVSVEGE-QHEKAVELLKAAQ-GSVKLVVRSGP 90 (93)
T ss_dssp CTTSHHH----HHCCCCTTCBEEEETTEECTTS-CHHHHHHHHHHCC-SEEEEEECCCC
T ss_pred CCCCHHH----HcCCCCCCCEEEEECCEECCCC-CHHHHHHHHHhCC-CcEEEEEEeCC
Confidence 4789999 996 999999999999886554 6788888888764 58999999975
No 135
>1fc6_A Photosystem II D1 protease; D1 C-terminal processing protease, serine protease, serine- lysine catalytic DYAD, PDZ domain, photosynthesis; 1.80A {Scenedesmus obliquus} SCOP: b.36.1.3 c.14.1.2 PDB: 1fc9_A 1fc7_A 1fcf_A
Probab=98.94 E-value=2.5e-09 Score=80.08 Aligned_cols=63 Identities=17% Similarity=0.311 Sum_probs=53.4
Q ss_pred CCCCCccccccccCCCCCCEEEEECCeecCCcccHHHHHHHHHhCCCceEEEEEEeCCce---EEEEEEeec
Q psy12583 8 SEGYPRQDVDVYQGLVKDDIILEFGPINSSNFKSLQDIASTVRAGVNTDIPITVLRNEGT---RQRLVLRPQ 76 (96)
Q Consensus 8 ~~~~pa~~~~~~aGLk~GD~Il~vng~~~~~~~~~~di~~~i~~~~g~~i~l~V~R~g~~---~~~l~v~p~ 76 (96)
.+|+||+ +|||++||+|++|||.++.++ ..+++...++..+|.+++++|.|++ + .+++++++.
T Consensus 107 ~~~spA~----~aGl~~GD~I~~Ing~~v~~~-~~~~~~~~l~~~~g~~v~l~v~r~g-~~~~~~~~~l~r~ 172 (388)
T 1fc6_A 107 APGGPAE----KAGARAGDVIVTVDGTAVKGM-SLYDVSDLLQGEADSQVEVVLHAPG-APSNTRTLQLTRQ 172 (388)
T ss_dssp CTTSHHH----HTTCCTTCEEEEETTEECTTC-CHHHHHHHHCBSTTCEEEEEEEETT-EEEEEEEEEEECB
T ss_pred CCCChHH----HcCCCCCCEEEEECCEECCCC-CHHHHHHHHhcCCCCEEEEEEEeCC-CCcceEEEEEEEc
Confidence 4789999 999999999999999876443 2477888888888999999999999 7 788888765
No 136
>3r68_A Na(+)/H(+) exchange regulatory cofactor NHE-RF3; PDZ domain, adaptor protein, SR-BI, signaling protein; 1.30A {Mus musculus} SCOP: b.36.1.0 PDB: 3r69_A*
Probab=98.94 E-value=9e-10 Score=67.00 Aligned_cols=52 Identities=19% Similarity=0.387 Sum_probs=41.0
Q ss_pred CCCCCccccccccCCCCCCEEEEECCeecCCcccHHHHHHHHHhCCCceEEEEEEeCC
Q psy12583 8 SEGYPRQDVDVYQGLVKDDIILEFGPINSSNFKSLQDIASTVRAGVNTDIPITVLRNE 65 (96)
Q Consensus 8 ~~~~pa~~~~~~aGLk~GD~Il~vng~~~~~~~~~~di~~~i~~~~g~~i~l~V~R~g 65 (96)
.+|+||+ +|||++||+|++|||.++.++ ++.++..+++... ..+.+.+.|.+
T Consensus 37 ~~~spA~----~aGl~~GD~I~~ing~~v~~~-~~~~~~~~l~~~~-~~~~~~~~r~~ 88 (95)
T 3r68_A 37 EPGSPAE----AAGLKNNDLVVAVNGKSVEAL-DHDGVVEMIRKGG-DQTTLLVLDKE 88 (95)
T ss_dssp CTTSHHH----HHTCCTTEEEEEETTEECTTC-CHHHHHHHHHTTT-TEEEEEEEECC
T ss_pred CCCCHHH----HCCCCCCCEEEEECCEECCCC-CHHHHHHHHHhCC-CeEEEEEECCc
Confidence 5789999 999999999999999875443 3488999999854 45666666655
No 137
>2db5_A INAD-like protein; PDZ domain, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ, structural genomics; NMR {Homo sapiens}
Probab=98.94 E-value=1.4e-09 Score=69.83 Aligned_cols=53 Identities=17% Similarity=0.170 Sum_probs=45.3
Q ss_pred CCCCCccccccccC-CCCCCEEEEECCeecCCcccHHHHHHHHHhCCCceEEEEEEeCC
Q psy12583 8 SEGYPRQDVDVYQG-LVKDDIILEFGPINSSNFKSLQDIASTVRAGVNTDIPITVLRNE 65 (96)
Q Consensus 8 ~~~~pa~~~~~~aG-Lk~GD~Il~vng~~~~~~~~~~di~~~i~~~~g~~i~l~V~R~g 65 (96)
.+++||+ ++| |++||+|++|||.++....++.++..+++. .+..+.|+|.|+.
T Consensus 62 ~~~spA~----~aG~L~~GD~Il~ing~~v~~~~~~~~~~~~l~~-~~~~v~l~v~r~~ 115 (128)
T 2db5_A 62 QPGSVAD----RDQRLKENDQILAINHTPLDQNISHQQAIALLQQ-TTGSLRLIVAREP 115 (128)
T ss_dssp CTTSHHH----HTCCCCSSCBEEEESSCBCSTTSCHHHHHHHHHH-CCSEEEEEEEECC
T ss_pred CCCCHHH----HcCCCCCCCEEEEECCEECCCCCCHHHHHHHHHc-CCCeEEEEEEcCC
Confidence 4789999 999 999999999999775312388999999988 5689999999987
No 138
>2dmz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.94 E-value=8e-10 Score=71.04 Aligned_cols=56 Identities=20% Similarity=0.344 Sum_probs=47.0
Q ss_pred CCCCCccccccccC-CCCCCEEEEECCeecCCcccHHHHHHHHHhCCCceEEEEEEeCCceEEE
Q psy12583 8 SEGYPRQDVDVYQG-LVKDDIILEFGPINSSNFKSLQDIASTVRAGVNTDIPITVLRNEGTRQR 70 (96)
Q Consensus 8 ~~~~pa~~~~~~aG-Lk~GD~Il~vng~~~~~~~~~~di~~~i~~~~g~~i~l~V~R~g~~~~~ 70 (96)
.+++||+ +|| |++||+|++|||+++.+. ++.++..+++. .+..+.|+|.|++ +..+
T Consensus 54 ~~~spA~----~aG~L~~GD~I~~vng~~v~~~-~~~~~~~~l~~-~~~~v~l~v~R~~-~~~~ 110 (129)
T 2dmz_A 54 IPGSAAY----HNGHIQVNDKIVAVDGVNIQGF-ANHDVVEVLRN-AGQVVHLTLVRRK-TSSS 110 (129)
T ss_dssp CTTSHHH----HHTCCCSSCBEEEETTBCCTTC-CHHHHHHHHHH-CCSSEEEEEEEES-SSSS
T ss_pred CCCCHHH----HcCCCCCCCEEEEECCEECCCC-CHHHHHHHHHc-CCCeEEEEEEeCC-cccc
Confidence 4789999 999 999999999999765332 38899999998 7889999999988 5433
No 139
>1ufx_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.94 E-value=4.3e-10 Score=70.30 Aligned_cols=53 Identities=19% Similarity=0.194 Sum_probs=45.5
Q ss_pred CCCCCccccccccC-CCCCCEEEEECCeecCCcccHHHHHHHHHhC----CCceEEEEEEeCC
Q psy12583 8 SEGYPRQDVDVYQG-LVKDDIILEFGPINSSNFKSLQDIASTVRAG----VNTDIPITVLRNE 65 (96)
Q Consensus 8 ~~~~pa~~~~~~aG-Lk~GD~Il~vng~~~~~~~~~~di~~~i~~~----~g~~i~l~V~R~g 65 (96)
.+++||+ ++| |++||+|++|||++... .+|+++.++|+.. .+.++++.|.|.+
T Consensus 40 ~~~s~A~----~aG~L~~GD~Il~Vng~~v~~-~~~~~~~~~l~~~~~~~~~~~i~l~v~r~~ 97 (103)
T 1ufx_A 40 QRGGSAH----NCGQLKVGHVILEVNGLTLRG-KEHREAARIIAEAFKTKDRDYIDFLVTEFN 97 (103)
T ss_dssp CTTSHHH----HHCSSCTTCBCCEETTEECTT-CBHHHHHHHHHHHHHCSSCSEEEEEECCCC
T ss_pred CCCChHH----HCCCCCCCCEEEEECCEECCC-CCHHHHHHHHHHhcccCCCCeEEEEEEEcc
Confidence 3889999 999 99999999999988544 3689999999875 6789999999976
No 140
>1mfg_A ERB-B2 interacting protein; PDZ domain, protein-peptide complex, erbin., signaling protein; 1.25A {Homo sapiens} SCOP: b.36.1.1 PDB: 1mfl_A
Probab=98.94 E-value=2.7e-09 Score=65.05 Aligned_cols=51 Identities=14% Similarity=0.158 Sum_probs=42.1
Q ss_pred CCCCCccccccccCCCCCCEEEEECCeecCCcccHHHHHHHHHhCCCceEEEEEEeCC
Q psy12583 8 SEGYPRQDVDVYQGLVKDDIILEFGPINSSNFKSLQDIASTVRAGVNTDIPITVLRNE 65 (96)
Q Consensus 8 ~~~~pa~~~~~~aGLk~GD~Il~vng~~~~~~~~~~di~~~i~~~~g~~i~l~V~R~g 65 (96)
.+++||+ + ||++||+|++|||.++.+. ++.++..+++. .+.++.|+|.|+.
T Consensus 43 ~~~spA~----~-gL~~GD~I~~vng~~v~~~-~~~~~~~~~~~-~~~~v~l~v~R~~ 93 (95)
T 1mfg_A 43 QPEGPAS----K-LLQPGDKIIQANGYSFINI-EHGQAVSLLKT-FQNTVELIIVREV 93 (95)
T ss_dssp CTTSTTT----T-TCCTTCEEEEETTEECTTC-BHHHHHHHHHH-CCSEEEEEEEEEC
T ss_pred CCCCchh----h-CCCCCCEEEEECCEEcCCC-CHHHHHHHhhc-CCCeEEEEEEeCC
Confidence 4789999 8 9999999999999886554 46777777774 5789999999965
No 141
>2iwq_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, membrane, HOST- interaction, structural genomics consortium, synaptosome, T junction; 1.80A {Homo sapiens}
Probab=98.94 E-value=1.4e-09 Score=70.04 Aligned_cols=52 Identities=21% Similarity=0.218 Sum_probs=44.2
Q ss_pred CCCCCccccccccC-CCCCCEEEEECCeecCCcccHHHHHHHHHhCCCceEEEEEEeCC
Q psy12583 8 SEGYPRQDVDVYQG-LVKDDIILEFGPINSSNFKSLQDIASTVRAGVNTDIPITVLRNE 65 (96)
Q Consensus 8 ~~~~pa~~~~~~aG-Lk~GD~Il~vng~~~~~~~~~~di~~~i~~~~g~~i~l~V~R~g 65 (96)
.+|+||+ +|| |++||+|++|||.++.+. ++.++.++++...+ ++.|+|.|..
T Consensus 67 ~~~spA~----~aG~L~~GD~Il~Vng~~v~~~-~~~~~~~~l~~~~~-~v~l~v~r~~ 119 (123)
T 2iwq_A 67 LEDSPAG----KNGTLKPGDRIVEVDGMDLRDA-SHEQAVEAIRKAGN-PVVFMVQSII 119 (123)
T ss_dssp CSSSHHH----HHCCCCTTCEEEEETTEECTTC-CHHHHHHHHHHCCS-SEEEEEECCC
T ss_pred CCCChHH----HcCCCCCCCEEEEECCEECCCC-CHHHHHHHHHcCCC-eEEEEEEECC
Confidence 4789999 999 999999999999875442 48899999988754 9999999976
No 142
>1uit_A Human discs large 5 protein; PDZ domain, HDLG5, maguk family, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.93 E-value=4e-10 Score=71.38 Aligned_cols=57 Identities=23% Similarity=0.209 Sum_probs=43.4
Q ss_pred CCCCCccccccccCCCCCCEEEEECCeecCCcccHHHHHHHH-HhCCCceEEEEEEeCCceEEEEE
Q psy12583 8 SEGYPRQDVDVYQGLVKDDIILEFGPINSSNFKSLQDIASTV-RAGVNTDIPITVLRNEGTRQRLV 72 (96)
Q Consensus 8 ~~~~pa~~~~~~aGLk~GD~Il~vng~~~~~~~~~~di~~~i-~~~~g~~i~l~V~R~g~~~~~l~ 72 (96)
.+++||+ +|||++||+|++|||+++.++..+ ..++ ....+.++.|+|.|++ +.+++.
T Consensus 50 ~~~spA~----~aGL~~GD~Il~vng~~v~~~~~~---~~~~~~~~~g~~v~l~v~r~~-~~~~~~ 107 (117)
T 1uit_A 50 TVGSIAH----QAGLEYGDQLLEFNGINLRSATEQ---QARLIIGQQCDTITILAQYNP-HVHQLS 107 (117)
T ss_dssp CTTSHHH----HHTCCTTCEECEETTEETTTCCHH---HHHHHTTSCCSEEEEEECCCS-CCCCCC
T ss_pred CCCCHHH----HcCCCCCCEEEEECCEECCCCCHH---HHHHHHHcCCCeEEEEEEECC-chhhhh
Confidence 4789999 999999999999999886554433 3333 2356789999999998 665543
No 143
>1v6b_A Harmonin isoform A1; structural genomics, usher syndrome, USH1, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.93 E-value=1.1e-09 Score=69.79 Aligned_cols=53 Identities=19% Similarity=0.253 Sum_probs=43.7
Q ss_pred CCCCCcccccccc-CCCCCCEEEEECCeecCCcccHHHHHHHHHhC---CCceEEEEEEeCC
Q psy12583 8 SEGYPRQDVDVYQ-GLVKDDIILEFGPINSSNFKSLQDIASTVRAG---VNTDIPITVLRNE 65 (96)
Q Consensus 8 ~~~~pa~~~~~~a-GLk~GD~Il~vng~~~~~~~~~~di~~~i~~~---~g~~i~l~V~R~g 65 (96)
.+|+||+ +| ||++||+|++|||.++..+ +|+++.+.++.. .+.+++|+|.|..
T Consensus 51 ~~gspA~----~aggL~~GD~Il~Ing~~v~~~-~~~~~~~~l~~~~~~~g~~v~l~v~r~~ 107 (118)
T 1v6b_A 51 YEGGAAE----RHGGVVKGDEIMAINGKIVTDY-TLAEAEAALQKAWNQGGDWIDLVVAVCP 107 (118)
T ss_dssp CTTSHHH----HHCSSCTTCEEEEESSCBCTTC-BHHHHHHHHHHHHHHTCSEEEEEEECCC
T ss_pred CCCCHHH----HcCCCCCCCEEEEECCEECCCC-CHHHHHHHHHHhhhcCCCeEEEEEEeCC
Confidence 5789999 99 9999999999999775443 588888888754 4789999999953
No 144
>3nfk_A Tyrosine-protein phosphatase non-receptor type 4; PDZ-PDZ-binding site complex, protein binding; 1.43A {Homo sapiens} SCOP: b.36.1.1 PDB: 3nfl_A 2vph_A
Probab=98.93 E-value=1.3e-09 Score=67.80 Aligned_cols=52 Identities=13% Similarity=0.211 Sum_probs=42.8
Q ss_pred CCCCCccccccccC--CCCCCEEEEECCeecCCcccHHHHHHHHHhCC---CceEEEEEEeC
Q psy12583 8 SEGYPRQDVDVYQG--LVKDDIILEFGPINSSNFKSLQDIASTVRAGV---NTDIPITVLRN 64 (96)
Q Consensus 8 ~~~~pa~~~~~~aG--Lk~GD~Il~vng~~~~~~~~~~di~~~i~~~~---g~~i~l~V~R~ 64 (96)
.+|+||+ ++| |++||+|++|||.++.++ ++.++...++... +..+.|+|.|+
T Consensus 51 ~~~spA~----~aG~rL~~GD~Il~ing~~v~~~-~~~~~~~~i~~~~~~~~~~v~l~v~r~ 107 (107)
T 3nfk_A 51 APGTPAD----LCVPRLNEGDQVVLINGRDIAEH-THDQVVLFIKASCERHSGELMLLVRPN 107 (107)
T ss_dssp CTTSHHH----HSSSCCCTTCEEEEETTEECTTC-CHHHHHHHHHCGGGSBTTBEEEEEECC
T ss_pred CCCCchH----HcCCccCCCCEEEEECCEECCCC-CHHHHHHHHHhccccCCcEEEEEEEcC
Confidence 5789999 999 999999999999886554 4577788887654 35899999885
No 145
>1va8_A Maguk P55 subfamily member 5; PDZ domain, palmitoylated 5, PALS1 protein, structural genomics, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.93 E-value=1.4e-09 Score=68.66 Aligned_cols=52 Identities=13% Similarity=0.218 Sum_probs=44.7
Q ss_pred CCCCCccccccccCC-CCCCEEEEECCeecCCcccHHHHHHHHHhCCCceEEEEEEeCC
Q psy12583 8 SEGYPRQDVDVYQGL-VKDDIILEFGPINSSNFKSLQDIASTVRAGVNTDIPITVLRNE 65 (96)
Q Consensus 8 ~~~~pa~~~~~~aGL-k~GD~Il~vng~~~~~~~~~~di~~~i~~~~g~~i~l~V~R~g 65 (96)
.+++||+ +||| ++||+|++|||.++..+ +|.++..+++... .++.|+|.|++
T Consensus 56 ~~~spA~----~aGll~~GD~I~~vng~~v~~~-~~~~~~~~l~~~~-~~v~l~v~r~~ 108 (113)
T 1va8_A 56 VKGGAAE----KSGLLHEGDEVLEINGIEIRGK-DVNEVFDLLSDMH-GTLTFVLIPSS 108 (113)
T ss_dssp CTTSHHH----HHTCCCTTCEEEEETTEECTTC-CHHHHHHHHHHCC-EEEEEEEECCC
T ss_pred CCCCHHH----HcCCCCCCCEEEEECCEECCCC-CHHHHHHHHHcCC-CeEEEEEEECC
Confidence 4789999 9999 99999999999886443 6889999998765 58999999988
No 146
>1wf8_A Neurabin-I; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.92 E-value=1.5e-09 Score=67.68 Aligned_cols=52 Identities=21% Similarity=0.294 Sum_probs=44.1
Q ss_pred CCCCCccccccccC-CCCCCEEEEECCeecCCcccHHHHHHHHHhCCCceEEEEEEeCC
Q psy12583 8 SEGYPRQDVDVYQG-LVKDDIILEFGPINSSNFKSLQDIASTVRAGVNTDIPITVLRNE 65 (96)
Q Consensus 8 ~~~~pa~~~~~~aG-Lk~GD~Il~vng~~~~~~~~~~di~~~i~~~~g~~i~l~V~R~g 65 (96)
.+++||+ ++| |++||+|++|||.++.+. ++.++..+++.. +.++.|+|.|++
T Consensus 48 ~~~spA~----~aG~L~~GD~I~~vng~~v~~~-~~~~~~~~~~~~-~~~v~l~v~R~~ 100 (107)
T 1wf8_A 48 TEGGAAQ----RDGRIQVNDQIVEVDGISLVGV-TQNFAATVLRNT-KGNVRFVIGREK 100 (107)
T ss_dssp CTTCHHH----HHCSSCTTCBEEEETTEECBSC-CHHHHHHHHHHC-CSEEEEEEEEEC
T ss_pred CCCCHHH----HcCCCCCCCEEEEECCEECCCC-CHHHHHHHHhcC-CCeEEEEEEeCC
Confidence 4789999 999 999999999999886543 577777888774 689999999976
No 147
>3gsl_A Disks large homolog 4; PDZ domain, tandem, PSD-95, DLG4, SAP-90, GLUR6, cell juncti membrane, lipoprotein, membrane, palmitate, phosphoprotein; 2.05A {Rattus norvegicus} PDB: 3zrt_A 2ka9_A
Probab=98.92 E-value=1.3e-09 Score=73.31 Aligned_cols=56 Identities=16% Similarity=0.224 Sum_probs=46.6
Q ss_pred CCCCCccccccccC-CCCCCEEEEECCeecCCcccHHHHHHHHHhCCCceEEEEEEeCCceEEE
Q psy12583 8 SEGYPRQDVDVYQG-LVKDDIILEFGPINSSNFKSLQDIASTVRAGVNTDIPITVLRNEGTRQR 70 (96)
Q Consensus 8 ~~~~pa~~~~~~aG-Lk~GD~Il~vng~~~~~~~~~~di~~~i~~~~g~~i~l~V~R~g~~~~~ 70 (96)
.+|+||+ ++| |++||+|++|||+++.+ .+|.++..+++. .++++.|+|.|++ +...
T Consensus 138 ~~gs~A~----~aG~L~~GD~Il~Vng~~v~~-~~~~~~~~~l~~-~~~~v~l~v~R~~-~~~~ 194 (196)
T 3gsl_A 138 IEGGAAH----KDGRLQIGDKILAVNSVGLED-VMHEDAVAALKN-TYDVVYLKVAKPS-NAET 194 (196)
T ss_dssp CTTSHHH----HHCCCCTTCEEEEETTEECSS-CBHHHHHHHHHS-CCEEEEEEEEEES-CCCE
T ss_pred CCCChHH----hcCCCCCCCEEEEECCCcCCC-CCHHHHHHHHHc-CCCeEEEEEeCCC-Cccc
Confidence 4789999 999 99999999999987544 249999999976 4789999999988 5443
No 148
>3k1r_A Harmonin; protein-protein complex, alternative splicing, coiled coil, deafness, hearing, non-syndromic deafness, polymorphism; 2.30A {Homo sapiens} PDB: 2kbq_A 2kbr_A 2lsr_A
Probab=98.92 E-value=1.7e-09 Score=73.94 Aligned_cols=51 Identities=18% Similarity=0.237 Sum_probs=44.6
Q ss_pred CCCCCccccccccCCCCCCEEEEECCeecCCcccHHHHHHHHHhCCCceEEEEEEeCC
Q psy12583 8 SEGYPRQDVDVYQGLVKDDIILEFGPINSSNFKSLQDIASTVRAGVNTDIPITVLRNE 65 (96)
Q Consensus 8 ~~~~pa~~~~~~aGLk~GD~Il~vng~~~~~~~~~~di~~~i~~~~g~~i~l~V~R~g 65 (96)
.+|+||+ ++||++||+|++|||.++.++ +|.++..+++. +..+.|+|.|++
T Consensus 118 ~~gspA~----~aGL~~GD~Il~vng~~v~~~-~~~~~~~~l~~--~~~v~l~v~r~g 168 (192)
T 3k1r_A 118 IKGGQAD----SVGLQVGDEIVRINGYSISSC-THEEVINLIRT--EKTVSIKVRHIG 168 (192)
T ss_dssp CTTSHHH----HTTCCTTEEEEEETTEECTTC-CHHHHHHHHTS--SSEEEEEEEECC
T ss_pred CCCChHH----HcCCCCCCEEEEECCEECCCC-CHHHHHHHHcC--CCeEEEEEEECC
Confidence 4789999 999999999999999875433 48899998887 789999999999
No 149
>1uhp_A Hypothetical protein KIAA1095; PDZ domain, semaphorin cytoplasmic domain associated protein, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.92 E-value=2.5e-09 Score=66.63 Aligned_cols=52 Identities=21% Similarity=0.296 Sum_probs=43.7
Q ss_pred CCCCCcccccccc-CCCCCCEEEEECCeecCCcccHHHHHHHHHhCCCceEEEEEEeCC
Q psy12583 8 SEGYPRQDVDVYQ-GLVKDDIILEFGPINSSNFKSLQDIASTVRAGVNTDIPITVLRNE 65 (96)
Q Consensus 8 ~~~~pa~~~~~~a-GLk~GD~Il~vng~~~~~~~~~~di~~~i~~~~g~~i~l~V~R~g 65 (96)
.+++||+ ++ ||++||+|++|||+++.+ .++.++..+++. .+.++.|+|.|.+
T Consensus 49 ~~~spA~----~aggL~~GD~Il~vng~~v~~-~~~~~~~~~~~~-~~~~v~l~v~R~~ 101 (107)
T 1uhp_A 49 VDSGPAA----KEGGLQIHDRIIEVNGRDLSR-ATHDQAVEAFKT-AKEPIVVQVLRRT 101 (107)
T ss_dssp CSSSHHH----HTTCCCSSCEEEEETTEECTT-CCHHHHHHHHHH-CCSSEEEEEEECC
T ss_pred CCCChHH----HcCCCCCCCEEEEECCEECCC-CCHHHHHHHHHc-CCCcEEEEEEeCC
Confidence 4789999 99 999999999999988644 357788888886 4678999999976
No 150
>2yuy_A RHO GTPase activating protein 21; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.92 E-value=4.7e-10 Score=72.14 Aligned_cols=52 Identities=19% Similarity=0.362 Sum_probs=45.1
Q ss_pred CCCCCccccccccCCCCCCEEEEECCeecCCcccHHHHHHHHHhCCCceEEEEEEeCC
Q psy12583 8 SEGYPRQDVDVYQGLVKDDIILEFGPINSSNFKSLQDIASTVRAGVNTDIPITVLRNE 65 (96)
Q Consensus 8 ~~~~pa~~~~~~aGLk~GD~Il~vng~~~~~~~~~~di~~~i~~~~g~~i~l~V~R~g 65 (96)
.+++||+ +|||++||+|++|||.++.. .++.++.++++.. +.++.|+|.|++
T Consensus 69 ~~~spA~----~aGL~~GD~I~~ing~~v~~-~~~~~~~~~l~~~-g~~v~l~v~r~~ 120 (126)
T 2yuy_A 69 KEGGPAF----EAGLCTGDRIIKVNGESVIG-KTYSQVIALIQNS-DTTLELSVMPKD 120 (126)
T ss_dssp CSSSHHH----HHTCCSSCCCCEETTEECSS-CCHHHHHHHHHTC-TTEEEEECCCCC
T ss_pred CCCChHH----HcCCCCCCEEEEECCEECCC-CCHHHHHHHHHcC-CCEEEEEEEECC
Confidence 4689999 99999999999999987533 2788999999875 789999999987
No 151
>1q3o_A Shank1; PDZ, GKAP, peptide binding protein; 1.80A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1q3p_A 3qjm_A 3qjn_A 3o5n_A*
Probab=98.92 E-value=1.8e-09 Score=67.58 Aligned_cols=52 Identities=19% Similarity=0.295 Sum_probs=42.5
Q ss_pred CCCCCccccccccCCCCCCEEEEECCeecCCcccHHHHHHHHHhCCCceEEEEEEeCC
Q psy12583 8 SEGYPRQDVDVYQGLVKDDIILEFGPINSSNFKSLQDIASTVRAGVNTDIPITVLRNE 65 (96)
Q Consensus 8 ~~~~pa~~~~~~aGLk~GD~Il~vng~~~~~~~~~~di~~~i~~~~g~~i~l~V~R~g 65 (96)
.+++||+ +|||++||+|++|||.++.++ +..++..+++.. +..+.|+|.|..
T Consensus 53 ~~~spA~----~aGl~~GD~I~~vng~~v~~~-~~~~~~~~l~~~-~~~v~l~v~~~~ 104 (109)
T 1q3o_A 53 DEGGVAW----RAGLRMGDFLIEVNGQNVVKV-GHRQVVNMIRQG-GNTLMVKVVMVT 104 (109)
T ss_dssp CTTSHHH----HTTCCTTCEEEEETTEECTTC-CHHHHHHHHHHT-TTEEEEEEEEEE
T ss_pred CCCCHHH----HcCCCCCCEEEEECCEECCCC-CHHHHHHHHHhC-CCEEEEEEEECC
Confidence 4789999 999999999999999875443 238888888875 678999988854
No 152
>3l4f_D SH3 and multiple ankyrin repeat domains protein 1; coiled-coil, PDZ, guanine-nucleotide releasing factor, phosphoprotein, SH3 domain; 2.80A {Rattus norvegicus}
Probab=98.91 E-value=3.5e-09 Score=68.83 Aligned_cols=52 Identities=17% Similarity=0.232 Sum_probs=44.2
Q ss_pred CCCCCccccccccCCCCCCEEEEECCeecCCcccHHHHHHHHHhCCCceEEEEEEeCC
Q psy12583 8 SEGYPRQDVDVYQGLVKDDIILEFGPINSSNFKSLQDIASTVRAGVNTDIPITVLRNE 65 (96)
Q Consensus 8 ~~~~pa~~~~~~aGLk~GD~Il~vng~~~~~~~~~~di~~~i~~~~g~~i~l~V~R~g 65 (96)
.+|+||+ +|||++||+|++|||.++..+ ++.++...++. .+..+.|+|.|..
T Consensus 73 ~~gspA~----~aGL~~GD~Il~Vng~~v~~~-~~~~~~~~l~~-~g~~v~l~v~~~~ 124 (132)
T 3l4f_D 73 DEGGVAW----RAGLRMGDFLIEVNGQNVVKV-GHRQVVNMIRQ-GGNTLMVKVVMVT 124 (132)
T ss_dssp CTTSGGG----GGTCCTTCEEEEESSSBCTTS-CHHHHHHHHHH-TTTEEEEEEECCC
T ss_pred CCCCHHH----HcCCCCCCEEEEECCEECCCC-CHHHHHHHHHc-CCCEEEEEEEECC
Confidence 4789999 999999999999999775443 57888888887 5679999999976
No 153
>2d8i_A T-cell lymphoma invasion and metastasis 1 variant; PDZ domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.91 E-value=1.3e-09 Score=69.61 Aligned_cols=50 Identities=16% Similarity=0.129 Sum_probs=41.8
Q ss_pred CCCCCccccccccCCCCCCEEEEECCeecCCcccHHHHHHHHHhCCCceEEEEEEeCC
Q psy12583 8 SEGYPRQDVDVYQGLVKDDIILEFGPINSSNFKSLQDIASTVRAGVNTDIPITVLRNE 65 (96)
Q Consensus 8 ~~~~pa~~~~~~aGLk~GD~Il~vng~~~~~~~~~~di~~~i~~~~g~~i~l~V~R~g 65 (96)
.+++||+ +|||++||+|++|||.++.++ +|.++.++++. .++.|+|+|..
T Consensus 52 ~~~spA~----~aGL~~GD~Il~Ing~~v~~~-~~~~~~~~l~~---~~v~l~v~R~p 101 (114)
T 2d8i_A 52 KETGLAS----KKGLKAGDEILEINNRAADAL-NSSMLKDFLSQ---PSLGLLVRTYP 101 (114)
T ss_dssp CTTSSHH----HHTCCTTCCEEEESSCBGGGC-CHHHHHHHHTS---SEEEEEEEECC
T ss_pred CCCCHHH----HcCCCCCCEEEEECCEECCCc-CHHHHHHHHhC---CcEEEEEEECC
Confidence 4789999 999999999999999775443 37888888874 38999999965
No 154
>3kzd_A TIAM-1, T-lymphoma invasion and metastasis-inducing prote; PDZ, cell junction, cell adhesion, signaling protein, nucleotide exchange factor; 1.30A {Homo sapiens} PDB: 3kze_A
Probab=98.91 E-value=2.1e-09 Score=66.94 Aligned_cols=48 Identities=17% Similarity=0.148 Sum_probs=39.2
Q ss_pred CCCCCccccccccCCCCCCEEEEECCeecCCcccHHHHHHHHHhCCCceEEEEEEe
Q psy12583 8 SEGYPRQDVDVYQGLVKDDIILEFGPINSSNFKSLQDIASTVRAGVNTDIPITVLR 63 (96)
Q Consensus 8 ~~~~pa~~~~~~aGLk~GD~Il~vng~~~~~~~~~~di~~~i~~~~g~~i~l~V~R 63 (96)
.+++||+ +|||++||+|++|||+++.++ +|+++.+++++ ++++++|+.
T Consensus 43 ~~~spA~----~aGL~~GD~Il~vng~~v~~~-~~~~l~~~l~~---~~l~ltV~~ 90 (94)
T 3kzd_A 43 KETGLAS----KKGLKAGDEILEINNRAADAL-NSSMLKDFLSQ---PSLGLLVRT 90 (94)
T ss_dssp CTTSHHH----HTTCCTTCEEEEETTEEGGGC-CHHHHHHHHHS---SEEEEEEEE
T ss_pred CCCCHHH----HcCCCCCCEEEEECCEECCCC-CHHHHHHHHhC---CeEEEEEEe
Confidence 4789999 999999999999999886543 68999998873 467777653
No 155
>1n7t_A 99-MER peptide of densin-180-like protein; PDZ domain, C-terminal peptide complex, high affnity ligand, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2h3l_A
Probab=98.91 E-value=3.9e-09 Score=65.29 Aligned_cols=51 Identities=14% Similarity=0.158 Sum_probs=42.2
Q ss_pred CCCCCccccccccCCCCCCEEEEECCeecCCcccHHHHHHHHHhCCCceEEEEEEeCC
Q psy12583 8 SEGYPRQDVDVYQGLVKDDIILEFGPINSSNFKSLQDIASTVRAGVNTDIPITVLRNE 65 (96)
Q Consensus 8 ~~~~pa~~~~~~aGLk~GD~Il~vng~~~~~~~~~~di~~~i~~~~g~~i~l~V~R~g 65 (96)
.+++||+ + ||++||+|++|||.++.+. ++.++...++. .+.++.|+|.|+.
T Consensus 51 ~~~spA~----~-gL~~GD~I~~vng~~v~~~-~~~~~~~~~~~-~g~~v~l~v~R~~ 101 (103)
T 1n7t_A 51 QPEGPAS----K-LLQPGDKIIQANGYSFINI-EHGQAVSLLKT-FQNTVELIIVREV 101 (103)
T ss_dssp SSSSTTS----S-SCCTTCEEEEETTEECSSC-CHHHHHHHHHH-CCSEEEEEEECCC
T ss_pred CCCCchH----H-CCCCCCEEEEECCEECCCC-CHHHHHHHhhc-CCCeEEEEEEecC
Confidence 4789999 8 9999999999999886554 46777777774 5789999999974
No 156
>1nf3_C PAR-6B; semi-CRIB motif, switch I and II, PDZ domain, GTPase binding domain, signaling protein; HET: GNP; 2.10A {Mus musculus} SCOP: b.36.1.1 PDB: 2lc6_A 1ry4_A 1x8s_A 2lc7_A 1rzx_A
Probab=98.91 E-value=2.3e-09 Score=69.11 Aligned_cols=52 Identities=31% Similarity=0.346 Sum_probs=44.5
Q ss_pred CCCCCccccccccC-CCCCCEEEEECCeecCCcccHHHHHHHHHhCCCceEEEEEEeCC
Q psy12583 8 SEGYPRQDVDVYQG-LVKDDIILEFGPINSSNFKSLQDIASTVRAGVNTDIPITVLRNE 65 (96)
Q Consensus 8 ~~~~pa~~~~~~aG-Lk~GD~Il~vng~~~~~~~~~~di~~~i~~~~g~~i~l~V~R~g 65 (96)
.+|+||+ +|| |++||+|++|||.++.. .++.++..+++... ..+.|+|.|++
T Consensus 73 ~~~spA~----~aG~L~~GD~Il~vng~~v~~-~~~~~~~~~l~~~~-~~v~l~v~r~~ 125 (128)
T 1nf3_C 73 VPGGLAQ----STGLLAVNDEVLEVNGIEVSG-KSLDQVTDMMIANS-RNLIITVRPAN 125 (128)
T ss_dssp CTTCHHH----HHTCCCTTCEEEEETTEESTT-CCHHHHHHHHHHTT-TSEEEEEECCC
T ss_pred CCCCHHH----HCCCCCCCCEEEEECCEECCC-CCHHHHHHHHHcCC-CeEEEEEEECC
Confidence 4789999 999 99999999999987543 47889999998654 57999999987
No 157
>4e34_A Golgi-associated PDZ and coiled-coil motif-contai protein; PDZ-peptide complex, protein transport-inhibitor complex; 1.40A {Homo sapiens} PDB: 4e35_A
Probab=98.91 E-value=1.8e-09 Score=64.73 Aligned_cols=50 Identities=20% Similarity=0.298 Sum_probs=41.3
Q ss_pred CCCCCccccccc-cCCCCCCEEEEECCeecCCcccHHHHHHHHHhCCCceEEEEEEe
Q psy12583 8 SEGYPRQDVDVY-QGLVKDDIILEFGPINSSNFKSLQDIASTVRAGVNTDIPITVLR 63 (96)
Q Consensus 8 ~~~~pa~~~~~~-aGLk~GD~Il~vng~~~~~~~~~~di~~~i~~~~g~~i~l~V~R 63 (96)
.+|+||+ + +||++||+|++|||.+..+. +|.++...++.. +.++.|+|++
T Consensus 36 ~~gspA~----~~agl~~GD~I~~vng~~v~~~-~~~~~~~~~~~~-~~~v~l~v~~ 86 (87)
T 4e34_A 36 HPGQPAD----RCGGLHVGDAILAVNGVNLRDT-KHKEAVTILSQQ-RGEIEFEVVY 86 (87)
T ss_dssp CTTSHHH----HHSCCCTTEEEEEETTEECTTC-CHHHHHHHHHHC-CSEEEEEEEE
T ss_pred CCCCHHH----hcCCCCCCCEEEEECCEECCCC-CHHHHHHHHHcC-CCeEEEEEEE
Confidence 5789999 9 79999999999999886554 678888888864 5578888764
No 158
>2eno_A Synaptojanin-2-binding protein; mitochondrial outer membrane protein 25, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.90 E-value=1.8e-09 Score=68.70 Aligned_cols=52 Identities=21% Similarity=0.231 Sum_probs=44.3
Q ss_pred CCCCCccccccccC-CCCCCEEEEECCeecCCcccHHHHHHHHHhCCCceEEEEEEeCC
Q psy12583 8 SEGYPRQDVDVYQG-LVKDDIILEFGPINSSNFKSLQDIASTVRAGVNTDIPITVLRNE 65 (96)
Q Consensus 8 ~~~~pa~~~~~~aG-Lk~GD~Il~vng~~~~~~~~~~di~~~i~~~~g~~i~l~V~R~g 65 (96)
.+++||+ ++| |++||+|++|||.++.++ .+.++..+++.. +..+.|+|.|++
T Consensus 55 ~~~spA~----~aG~L~~GD~Il~vng~~v~~~-~~~~~~~~~~~~-g~~v~l~v~R~~ 107 (120)
T 2eno_A 55 KENGAAA----LDGRLQEGDKILSVNGQDLKNL-LHQDAVDLFRNA-GYAVSLRVQHRL 107 (120)
T ss_dssp CSSSHHH----HSCCSCTTCEEEEETTEECCSC-CHHHHHHHHHHH-CSEEEEEEEEEE
T ss_pred CCCChHH----HCCCCCCCCEEEEECCEECCCC-CHHHHHHHHHcC-CCeEEEEEEeCC
Confidence 4789999 999 999999999999887655 367888888764 678999999987
No 159
>2dc2_A GOPC, golgi associated PDZ and coiled-coil motif containing isoform B; GOPC PDZ domain, structural protein; NMR {Homo sapiens}
Probab=98.89 E-value=3e-09 Score=66.15 Aligned_cols=52 Identities=19% Similarity=0.258 Sum_probs=44.5
Q ss_pred CCCCCcccccccc-CCCCCCEEEEECCeecCCcccHHHHHHHHHhCCCceEEEEEEeCC
Q psy12583 8 SEGYPRQDVDVYQ-GLVKDDIILEFGPINSSNFKSLQDIASTVRAGVNTDIPITVLRNE 65 (96)
Q Consensus 8 ~~~~pa~~~~~~a-GLk~GD~Il~vng~~~~~~~~~~di~~~i~~~~g~~i~l~V~R~g 65 (96)
.+++||+ ++ ||++||+|++|||.++.+. +|.++..+++...+ .++|++.|..
T Consensus 43 ~~~s~A~----~a~gL~~GD~Il~Ing~~v~~~-~~~~~~~~l~~~~~-~v~l~v~~~~ 95 (103)
T 2dc2_A 43 HPGQPAD----RCGGLHVGDAILAVNGVNLRDT-KHKEAVTILSQQRG-EIEFEVVYVA 95 (103)
T ss_dssp CTTSHHH----HHTCCCSSEEEEEETTEESTTS-CHHHHHHHHHHCCS-EEEEEEEECC
T ss_pred CCCCHHH----HhCCCCCCCEEEEECCEECCCC-CHHHHHHHHHhCCC-cEEEEEEecC
Confidence 4789999 95 9999999999999886554 68899999998654 8999999976
No 160
>3pv2_A DEGQ; trypsin fold, PDZ domain, chaperone protease, hydrolase; 2.15A {Legionella fallonii} PDB: 3pv3_A 3pv5_A 3pv4_A
Probab=98.89 E-value=2.7e-09 Score=81.68 Aligned_cols=57 Identities=18% Similarity=0.274 Sum_probs=50.2
Q ss_pred CCCCCccccccccCCCCCCEEEEECCeecCCcccHHHHHHHHHhCCCceEEEEEEeCCceEEEEEE
Q psy12583 8 SEGYPRQDVDVYQGLVKDDIILEFGPINSSNFKSLQDIASTVRAGVNTDIPITVLRNEGTRQRLVL 73 (96)
Q Consensus 8 ~~~~pa~~~~~~aGLk~GD~Il~vng~~~~~~~~~~di~~~i~~~~g~~i~l~V~R~g~~~~~l~v 73 (96)
.++|||+ ++||++||+|++|||++ +.+|+++.++++. .++.+.|+|+|++ +.+.+.+
T Consensus 394 ~~gspA~----~aGL~~GD~I~~Vng~~---v~~~~~~~~~l~~-~~~~v~l~v~R~g-~~~~v~l 450 (451)
T 3pv2_A 394 SENSAGW----RAGIRPGDIIISANKKP---VTDVKSLQTIAQE-KKKELLVQVLRGP-GSMYLLV 450 (451)
T ss_dssp CTTSHHH----HHTCCTTCEEEEETTEE---CCSHHHHHHHTTS-SCSCEEEEEEETT-EEEEEEE
T ss_pred CCCCHHH----HcCCCCCCEEEEECCEE---CCCHHHHHHHHhc-CCCeEEEEEEECC-EEEEEEe
Confidence 4789999 99999999999999966 5788999999987 5689999999999 8877765
No 161
>3i4w_A Disks large homolog 4; alpha and beta protein, alternative splicing, cell junction, cell membrane, lipoprotein, membrane, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.36.1.1 PDB: 3k82_A* 3jxt_A* 2he2_A 1pdr_A 2i0i_A
Probab=98.89 E-value=2.8e-09 Score=65.74 Aligned_cols=52 Identities=23% Similarity=0.300 Sum_probs=42.9
Q ss_pred CCCCCccccccccC-CCCCCEEEEECCeecCCcccHHHHHHHHHhCCCceEEEEEEeCC
Q psy12583 8 SEGYPRQDVDVYQG-LVKDDIILEFGPINSSNFKSLQDIASTVRAGVNTDIPITVLRNE 65 (96)
Q Consensus 8 ~~~~pa~~~~~~aG-Lk~GD~Il~vng~~~~~~~~~~di~~~i~~~~g~~i~l~V~R~g 65 (96)
.+++||+ +|| |++||+|++|||.++.++ ++.++...++. .+.++.++|.|++
T Consensus 43 ~~~spA~----~aG~l~~GD~I~~vng~~v~~~-~~~~~~~~~~~-~~~~v~l~v~r~~ 95 (104)
T 3i4w_A 43 LAGGPAD----LSGELRKGDQILSVNGVDLRNA-SHEQAAIALKN-AGQTVTIIAQYKP 95 (104)
T ss_dssp CTTSHHH----HHCCCCTTEEEEEETTEECTTC-CHHHHHHHHHT-SCSEEEEEEEECH
T ss_pred CCCChHH----hcCCCCCCCEEEEECCEECCCC-CHHHHHHHHHc-CCCeEEEEEEECc
Confidence 4789999 999 999999999999886554 56666677766 5679999999975
No 162
>2e7k_A Maguk P55 subfamily member 2; PDZ domain, MPP2 protein, discs large homolog 2, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.89 E-value=1.8e-09 Score=65.87 Aligned_cols=51 Identities=20% Similarity=0.176 Sum_probs=43.4
Q ss_pred CCCCCccccccccC-CCCCCEEEEECCeecCCcccHHHHHHHHHhCCCceEEEEEEeCC
Q psy12583 8 SEGYPRQDVDVYQG-LVKDDIILEFGPINSSNFKSLQDIASTVRAGVNTDIPITVLRNE 65 (96)
Q Consensus 8 ~~~~pa~~~~~~aG-Lk~GD~Il~vng~~~~~~~~~~di~~~i~~~~g~~i~l~V~R~g 65 (96)
.+++||+ ++| |++||+|++|||.++ ..+|+++.++++.. +.++.|+|.|..
T Consensus 37 ~~~spA~----~ag~L~~GD~I~~ing~~v--~~~~~~~~~~l~~~-~~~v~l~v~~~~ 88 (91)
T 2e7k_A 37 LHGGMVA----QQGLLHVGDIIKEVNGQPV--GSDPRALQELLRNA-SGSVILKILSGP 88 (91)
T ss_dssp CSSSHHH----HHCCCCTTCEEEEETTEEC--TTCHHHHHHHHHTC-CSSBCEEEECCS
T ss_pred CCCCHHH----HcCCCCCCCEEEEECCEEC--CCCHHHHHHHHHcC-CCeEEEEEEECC
Confidence 4789999 987 999999999999775 26899999999875 568999998864
No 163
>2daz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.89 E-value=2.3e-09 Score=68.56 Aligned_cols=61 Identities=18% Similarity=0.264 Sum_probs=47.5
Q ss_pred CCCCCccccccccC-CCCCCEEEEECCeecCCcccHHHHHHHHHhCCCceEEEEEEeCCceEE-EEEEee
Q psy12583 8 SEGYPRQDVDVYQG-LVKDDIILEFGPINSSNFKSLQDIASTVRAGVNTDIPITVLRNEGTRQ-RLVLRP 75 (96)
Q Consensus 8 ~~~~pa~~~~~~aG-Lk~GD~Il~vng~~~~~~~~~~di~~~i~~~~g~~i~l~V~R~g~~~~-~l~v~p 75 (96)
.+|+||+ +|| |++||+|++|||+++.+. ++.++..+++... .++.|+|.|++ +.. .+.++|
T Consensus 59 ~~~spA~----~aG~L~~GD~Il~Ing~~v~~~-~~~~~~~~~~~~~-~~v~l~v~R~~-~~~~~~~~~P 121 (124)
T 2daz_A 59 NPEGPAA----ADGRMRIGDELLEINNQILYGR-SHQNASAIIKTAP-SKVKLVFIRNE-DAVNQMASGP 121 (124)
T ss_dssp CTTSHHH----HHTCCCTTCEECEESSCBCTTS-CHHHHHHHHHHSC-SEEEEEEEECT-THHHHBCCCC
T ss_pred CCCCHHH----HcCCCCCCCEEEEECCEECCCC-CHHHHHHHHHcCC-CeEEEEEEeCC-CcccccccCC
Confidence 4789999 999 999999999999775443 5777778887764 59999999988 542 344444
No 164
>1uez_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.89 E-value=4.5e-10 Score=69.35 Aligned_cols=51 Identities=14% Similarity=0.183 Sum_probs=38.7
Q ss_pred CCCCCccccccccCCCCCCEEEEECCeecCCcccHHHHHHHHHhCCCceEEEEEEeCC
Q psy12583 8 SEGYPRQDVDVYQGLVKDDIILEFGPINSSNFKSLQDIASTVRAGVNTDIPITVLRNE 65 (96)
Q Consensus 8 ~~~~pa~~~~~~aGLk~GD~Il~vng~~~~~~~~~~di~~~i~~~~g~~i~l~V~R~g 65 (96)
.+++||+ +|||++||+|++|||+++.++.. .++...+ ..+.++.|+|.|++
T Consensus 43 ~~~spA~----~aGL~~GD~I~~ing~~v~~~~~-~~~~~~~--~~~~~v~l~v~R~g 93 (101)
T 1uez_A 43 EPGSLAE----KEGLRVGDQILRVNDKSLARVTH-AEAVKAL--KGSKKLVLSVYSAG 93 (101)
T ss_dssp CTTSHHH----HHTCCSSCCEEEETTEECSSCCH-HHHHHHS--SSSSSCCEEECCCC
T ss_pred CCCCHHH----HcCCCCCCEEEEECCEECCCcCH-HHHHHhh--cCCCeEEEEEEECC
Confidence 4789999 99999999999999988655433 2222222 34568999999988
No 165
>2qt5_A Glutamate receptor-interacting protein 1; PDZ-peptide complex, PDZ tandem, alternative splicing, cell junction, cytoplasm; 2.30A {Rattus norvegicus}
Probab=98.88 E-value=2e-09 Score=73.41 Aligned_cols=55 Identities=13% Similarity=0.189 Sum_probs=46.6
Q ss_pred CCCCCccccccccC-CCCCCEEEEECCeecCCcccHHHHHHHHHhCCCceEEEEEEeCCceEE
Q psy12583 8 SEGYPRQDVDVYQG-LVKDDIILEFGPINSSNFKSLQDIASTVRAGVNTDIPITVLRNEGTRQ 69 (96)
Q Consensus 8 ~~~~pa~~~~~~aG-Lk~GD~Il~vng~~~~~~~~~~di~~~i~~~~g~~i~l~V~R~g~~~~ 69 (96)
.+++||+ ++| |++||+|++|||.++... +|.++.++++. .+.++.|+|+|++ +.+
T Consensus 143 ~~~s~A~----~aG~l~~GD~I~~ing~~v~~~-~~~~~~~~l~~-~~~~v~l~v~R~~-~~~ 198 (200)
T 2qt5_A 143 RPGGPAD----REGTIKPGDRLLSVDGIRLLGT-THAEAMSILKQ-CGQEATLLIEYDV-SVM 198 (200)
T ss_dssp CTTSHHH----HHCCCCTTCEEEEETTEECTTC-CHHHHHHHHHT-TCSEEEEEEEEEE-EC-
T ss_pred CCCChHH----HcCCCCCCCEEEEECCEECCCC-CHHHHHHHHHc-CCCeEEEEEEECC-ccC
Confidence 4789999 999 999999999999774321 79999999998 7889999999987 543
No 166
>1ky9_A Protease DO, DEGP, HTRA; protein quality control, serine protease, trypsin, chaperone, PDZ, ATP-independent, temperature-regulated, periplasm; 2.80A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3ou0_A 4a8d_A 3otp_A 3mh7_A 3mh4_A 3mh5_A* 3mh6_A* 3cs0_A 2zle_A
Probab=98.88 E-value=8.4e-10 Score=84.41 Aligned_cols=61 Identities=16% Similarity=0.251 Sum_probs=51.5
Q ss_pred CCCCCccccccccCCCCCCEEEEECCeecCCcccHHHHHHHHHh-CCCceEEEEEEeCCceEEEEEEeec
Q psy12583 8 SEGYPRQDVDVYQGLVKDDIILEFGPINSSNFKSLQDIASTVRA-GVNTDIPITVLRNEGTRQRLVLRPQ 76 (96)
Q Consensus 8 ~~~~pa~~~~~~aGLk~GD~Il~vng~~~~~~~~~~di~~~i~~-~~g~~i~l~V~R~g~~~~~l~v~p~ 76 (96)
.+++||+ +|||++||+|++|||.+ +.+|.++..++.. .+|.+++++|.|++ +.+++++++.
T Consensus 294 ~~gspA~----~AGL~~GDvI~~inG~~---v~~~~~l~~~l~~~~~g~~v~l~v~R~g-~~~~~~v~~~ 355 (448)
T 1ky9_A 294 LPNSSAA----KAGIKAGDVITSLNGKP---ISSFAALRAQVGTMPVGSKLTLGLLRDG-KQVNVNLELQ 355 (448)
T ss_dssp TTCSSST----TTTCCTTCEECBSSSSB---CCSSHHHHHHTTSSBTTCCCEEEEESSS-CEEECCCC--
T ss_pred ccCCHHH----HcCCCCCCEEEEECCEE---cCCHHHHHHHHHhcCCCCEEEEEEEECC-EEEEEEEEEe
Confidence 4789999 99999999999999855 6788899888876 46889999999999 8888877764
No 167
>3b76_A E3 ubiquitin-protein ligase LNX; PDZ, bound ligand, structural genomics, structural genomics consortium, SGC, metal-binding; 1.75A {Homo sapiens}
Probab=98.88 E-value=3e-09 Score=68.09 Aligned_cols=52 Identities=15% Similarity=0.264 Sum_probs=43.7
Q ss_pred CCCCCccccccccC-CCCCCEEEEECCeecCCcccHHHHHHHHHhCCCceEEEEEEeCC
Q psy12583 8 SEGYPRQDVDVYQG-LVKDDIILEFGPINSSNFKSLQDIASTVRAGVNTDIPITVLRNE 65 (96)
Q Consensus 8 ~~~~pa~~~~~~aG-Lk~GD~Il~vng~~~~~~~~~~di~~~i~~~~g~~i~l~V~R~g 65 (96)
.+|+||+ ++| |++||+|++|||.++... ++.++..+++.. +..+.|+|.|..
T Consensus 61 ~~gspA~----~aG~L~~GD~Il~VNg~~v~~~-~~~~~~~~l~~~-~~~v~L~v~R~~ 113 (118)
T 3b76_A 61 EPGGVIS----RDGRIKTGDILLNVDGVELTEV-SRSEAVALLKRT-SSSIVLKALEVK 113 (118)
T ss_dssp CTTSHHH----HHCSSCTTCEEEEETTEEGGGS-CHHHHHHHHHSC-CSEEEEEEEEEE
T ss_pred CCCCHHH----HCCCCCCCCEEEEECCEECCCC-CHHHHHHHHHcC-CCeEEEEEEECC
Confidence 4789999 999 999999999999875433 788999999875 567999999854
No 168
>2ehr_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.88 E-value=4.1e-09 Score=66.64 Aligned_cols=52 Identities=19% Similarity=0.220 Sum_probs=43.9
Q ss_pred CCCCCccccccccC-CCCCCEEEEECCeecCCcccHHHHHHHHHhCCCceEEEEEEeCC
Q psy12583 8 SEGYPRQDVDVYQG-LVKDDIILEFGPINSSNFKSLQDIASTVRAGVNTDIPITVLRNE 65 (96)
Q Consensus 8 ~~~~pa~~~~~~aG-Lk~GD~Il~vng~~~~~~~~~~di~~~i~~~~g~~i~l~V~R~g 65 (96)
.+++||+ ++| |++||+|++|||.++.+. ++.++..+++. .+.++.|+|.|..
T Consensus 58 ~~~spA~----~aG~L~~GD~Il~vng~~v~~~-~~~~~~~~~~~-~g~~v~l~v~r~~ 110 (117)
T 2ehr_A 58 LEDSPAG----KTNALKTGDKILEVSGVDLQNA-SHSEAVEAIKN-AGNPVVFIVQSLS 110 (117)
T ss_dssp CSSSTTT----SSCSCCTTCEEEEESSCBCTTC-CHHHHHHHHHT-SCSSEEEEECCBS
T ss_pred CCCChHH----HcCCCCCCCEEEEECCEECCCC-CHHHHHHHHHc-CCCeEEEEEEECC
Confidence 4789999 999 999999999999876554 47788888876 5789999999876
No 169
>2eei_A PDZ domain-containing protein 1; regulatory factor, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.87 E-value=1.7e-09 Score=67.11 Aligned_cols=52 Identities=15% Similarity=0.257 Sum_probs=43.4
Q ss_pred CCCCCccccccccCCCCCCEEEEECCeecCCcccHHHHHHHHHhCCCceEEEEEEeCC
Q psy12583 8 SEGYPRQDVDVYQGLVKDDIILEFGPINSSNFKSLQDIASTVRAGVNTDIPITVLRNE 65 (96)
Q Consensus 8 ~~~~pa~~~~~~aGLk~GD~Il~vng~~~~~~~~~~di~~~i~~~~g~~i~l~V~R~g 65 (96)
.+++||+ +|||++||+|++|||.++..+ ++.++...++.. +.++.++|.|.+
T Consensus 40 ~~~spA~----~aGl~~GD~I~~vng~~v~~~-~~~~~~~~~~~~-~~~v~l~v~r~~ 91 (106)
T 2eei_A 40 TPQGVAM----RAGVLADDHLIEVNGENVEDA-SHEEVVEKVKKS-GSRVMFLLVDKE 91 (106)
T ss_dssp CTTSHHH----HHTCCSSEEEEEETTEECTTC-CHHHHHHHHHHH-CSEEEEEECCTT
T ss_pred CCCCHHH----HcCCCCCCEEEEECCEECCCC-CHHHHHHHHHhC-CCeEEEEEEcCc
Confidence 4789999 999999999999999886543 577888888764 578999999977
No 170
>3e17_A Tight junction protein ZO-2; domain swapping, alternative promoter usage, alternative splicing, cell junction, cell membrane, disease mutation; 1.75A {Homo sapiens}
Probab=98.87 E-value=3.4e-09 Score=64.23 Aligned_cols=52 Identities=25% Similarity=0.317 Sum_probs=42.9
Q ss_pred CCCCCccccccccC-CCCCCEEEEECCeecCCcccHHHHHHHHHhCCCceEEEEEEeCC
Q psy12583 8 SEGYPRQDVDVYQG-LVKDDIILEFGPINSSNFKSLQDIASTVRAGVNTDIPITVLRNE 65 (96)
Q Consensus 8 ~~~~pa~~~~~~aG-Lk~GD~Il~vng~~~~~~~~~~di~~~i~~~~g~~i~l~V~R~g 65 (96)
.+|+||+ ++| |++||+|++|||.+... .+|+++.++++...+ .+.|++.+..
T Consensus 29 ~~gspA~----~aG~L~~GD~Il~ing~~v~~-~~~~~~~~~i~~~~~-~v~L~v~~~~ 81 (88)
T 3e17_A 29 TRTGLAT----KDGNLHEGDIILKINGTVTEN-MSLTDARKLIEKSRG-KLQLVVLRDL 81 (88)
T ss_dssp CTTSHHH----HHCCCCTTCEEEEETTEECTT-CCHHHHHHHHHHTTT-EEEEEECCC-
T ss_pred CCCCHHH----HcCCCCCCCEEEEECCEECCC-CCHHHHHHHHHcCCC-eEEEEEeCCC
Confidence 4789999 999 99999999999987543 478999999998765 7888877643
No 171
>2qkv_A Inactivation-NO-after-potential D protein; PDZ domain, scaffolding protein, membrane, sensory transduction, vision; 1.55A {Drosophila melanogaster} PDB: 2qkt_A 2qku_A
Probab=98.87 E-value=4.5e-09 Score=64.49 Aligned_cols=52 Identities=19% Similarity=0.266 Sum_probs=41.2
Q ss_pred CCCCCccccccccC-CCCCCEEEEECCeecCCcccHHHHHHHHHhCCCceEEEEEEeCC
Q psy12583 8 SEGYPRQDVDVYQG-LVKDDIILEFGPINSSNFKSLQDIASTVRAGVNTDIPITVLRNE 65 (96)
Q Consensus 8 ~~~~pa~~~~~~aG-Lk~GD~Il~vng~~~~~~~~~~di~~~i~~~~g~~i~l~V~R~g 65 (96)
.+|+||+ ++| |++||+|++|||.++.+. .+.+....++.. +.++.|+|.|..
T Consensus 39 ~~~spA~----~aG~L~~GD~I~~Ing~~v~~~-~~~~~~~~~~~~-~~~v~l~v~R~~ 91 (96)
T 2qkv_A 39 IQGQYPE----IDSKLQRGDIITKFNGDALEGL-PFQVSYALFKGA-NGKVSMEVTRPK 91 (96)
T ss_dssp CTTSCHH----HHHHCCTTCEEEEETTEECTTC-CHHHHHHHHHTC-SSEEEEEEECCC
T ss_pred CCCChHH----hcCCCCCCCEEEEECCEECCCC-CHHHHHHHHhcC-CCcEEEEEEeCC
Confidence 4789999 999 999999999999886553 355666666654 457999999964
No 172
>3soe_A Membrane-associated guanylate kinase, WW and PDZ containing protein 3; structural genomics consortium, SGC, PDZ domain, signaling P; 1.60A {Homo sapiens}
Probab=98.87 E-value=7.3e-09 Score=66.43 Aligned_cols=53 Identities=26% Similarity=0.367 Sum_probs=43.4
Q ss_pred CccccccccCCCCCCEEEEECCeecCCcccHHHHHHHHHhCC-CceEEEEEEeCCceEEE
Q psy12583 12 PRQDVDVYQGLVKDDIILEFGPINSSNFKSLQDIASTVRAGV-NTDIPITVLRNEGTRQR 70 (96)
Q Consensus 12 pa~~~~~~aGLk~GD~Il~vng~~~~~~~~~~di~~~i~~~~-g~~i~l~V~R~g~~~~~ 70 (96)
||. .|||++||+|++|||.++.++ ++.++.++|+..+ |.++.|+|.|++ ....
T Consensus 44 ~~~----~aGL~~GD~Il~VNG~~v~~~-~h~evv~~lk~~~~G~~v~L~V~R~g-~~~p 97 (113)
T 3soe_A 44 SQW----CQGLQKGDIIKEIYHQNVQNL-THLQVVEVLKQFPVGADVPLLILRGG-PPSP 97 (113)
T ss_dssp GGG----STTCCTTCEEEEETTEECTTS-CHHHHHHHHHHSCTTCEEEEEEEESS-CC--
T ss_pred hHH----hCCCCCCCEEEEECCEECCCC-CHHHHHHHHHcCCCCCEEEEEEEECC-ccCc
Confidence 566 899999999999999886554 6789999999764 789999999998 5433
No 173
>2h2b_A Tight junction protein ZO-1; PDZ domain, phage derived high affinity ligand, cell adhesio; 1.60A {Homo sapiens} PDB: 2h2c_A 2h3m_A 2rrm_A
Probab=98.86 E-value=8.6e-09 Score=64.02 Aligned_cols=51 Identities=16% Similarity=0.244 Sum_probs=38.1
Q ss_pred CCCCCccccccccCCCCCCEEEEECCeecCCcccHHHHHHHHHhCCCceEEEEEEeCC
Q psy12583 8 SEGYPRQDVDVYQGLVKDDIILEFGPINSSNFKSLQDIASTVRAGVNTDIPITVLRNE 65 (96)
Q Consensus 8 ~~~~pa~~~~~~aGLk~GD~Il~vng~~~~~~~~~~di~~~i~~~~g~~i~l~V~R~g 65 (96)
.+++||+ +||++||+|++|||.++.++.....+ ..+ ..++.++.++|.|++
T Consensus 47 ~~~spA~-----agl~~GD~I~~vng~~v~~~~~~~~~-~~~-~~~g~~v~l~v~R~~ 97 (107)
T 2h2b_A 47 LKGGPAE-----GQLQENDRVAMVNGVSMDNVEHAFAV-QQL-RKSGKNAKITIRRKK 97 (107)
T ss_dssp CTTSTTB-----TTBCTTCEEEEETTEECTTCCHHHHH-HHH-HTCCSEEEEEEEEES
T ss_pred CCCCchh-----hCCCCCCEEEEECCEECCCccHHHHH-HHh-hCCCCEEEEEEEECC
Confidence 4688997 79999999999999886555433322 122 256789999999988
No 174
>3egg_C Spinophilin; PP1, serine/threonine phosphatase, post synapti density, glutametergic receptors, carbohydrate metabolism, cycle, cell division; HET: MES; 1.85A {Rattus norvegicus} PDB: 3egh_C* 3hvq_C 2fn5_A
Probab=98.85 E-value=5e-09 Score=71.10 Aligned_cols=51 Identities=18% Similarity=0.263 Sum_probs=44.1
Q ss_pred CCCCCccccccccC-CCCCCEEEEECCeecCCcccHHHHHHHHHhCCCceEEEEEEeC
Q psy12583 8 SEGYPRQDVDVYQG-LVKDDIILEFGPINSSNFKSLQDIASTVRAGVNTDIPITVLRN 64 (96)
Q Consensus 8 ~~~~pa~~~~~~aG-Lk~GD~Il~vng~~~~~~~~~~di~~~i~~~~g~~i~l~V~R~ 64 (96)
.+|+||+ ++| |++||+|++|||..+... ++.++..+++. .+..+.|+|.|+
T Consensus 119 ~~gspA~----~aG~L~~GD~Il~VNG~~v~~~-~~~~~~~~l~~-~g~~v~L~V~R~ 170 (170)
T 3egg_C 119 TEGGAAH----RDGRIQVNDLLVEVDGTSLVGV-TQSFAASVLRN-TKGRVRFMIGRE 170 (170)
T ss_dssp CTTSHHH----HHCCCCTTCEEEEETTEECTTB-CHHHHHHHHHH-CCSEEEEEEEEC
T ss_pred CCCChHH----HCCCCCCCCEEEEECCEECCCC-CHHHHHHHHHc-CCCEEEEEEEeC
Confidence 4789999 999 999999999999886554 67888899988 567999999995
No 175
>2gzv_A PRKCA-binding protein; protein kinase C, PDZ domain, structural genomics, structura genomics consortium, SGC, signaling protein; 1.12A {Homo sapiens} PDB: 2pku_A
Probab=98.85 E-value=4.1e-09 Score=66.87 Aligned_cols=51 Identities=14% Similarity=0.187 Sum_probs=42.3
Q ss_pred CCCCCccccccccC-CCCCCEEEEECCeecCCcccHHHHHHHHHhCCCceEEEEEEeC
Q psy12583 8 SEGYPRQDVDVYQG-LVKDDIILEFGPINSSNFKSLQDIASTVRAGVNTDIPITVLRN 64 (96)
Q Consensus 8 ~~~~pa~~~~~~aG-Lk~GD~Il~vng~~~~~~~~~~di~~~i~~~~g~~i~l~V~R~ 64 (96)
.+|+||+ +|| |++||+|++|||.++.. .+|.++.++++...+ .+.++|++-
T Consensus 58 ~~gspA~----~aG~L~~GD~I~~Ing~~v~~-~~~~~~~~~l~~~~~-~v~l~v~~~ 109 (114)
T 2gzv_A 58 FDNTPAA----LDGTVAAGDEITGVNGRSIKG-KTKVEVAKMIQEVKG-EVTIHYNKL 109 (114)
T ss_dssp CTTSHHH----HHCCCCTTCEEEEETTEECTT-CCHHHHHHHHHHCCS-EEEEEEECC
T ss_pred CCCChHH----HCCCCCCCCEEEEECCEECCC-CCHHHHHHHHHcCCC-eEEEEEEec
Confidence 4789999 999 99999999999977432 678999999987665 588888764
No 176
>2la8_A Inactivation-NO-after-potential D protein, KON-TI peptide; peptide binding protein; NMR {Drosophila melanogaster}
Probab=98.84 E-value=6.8e-09 Score=65.16 Aligned_cols=52 Identities=19% Similarity=0.268 Sum_probs=41.0
Q ss_pred CCCCCccccccccC-CCCCCEEEEECCeecCCcccHHHHHHHHHhCCCceEEEEEEeCC
Q psy12583 8 SEGYPRQDVDVYQG-LVKDDIILEFGPINSSNFKSLQDIASTVRAGVNTDIPITVLRNE 65 (96)
Q Consensus 8 ~~~~pa~~~~~~aG-Lk~GD~Il~vng~~~~~~~~~~di~~~i~~~~g~~i~l~V~R~g 65 (96)
.+|+||+ +|| |++||+|++|||+++.+. .+.+....++. .+.++.++|.|..
T Consensus 33 ~~gspA~----~aG~L~~GD~Il~Ing~~v~~~-~~~~~~~~~~~-~~~~v~l~v~R~~ 85 (106)
T 2la8_A 33 IQGQYPE----IDSKLQRGDIITKFNGDALEGL-PFQVCYALFKG-ANGKVSMEVTRPK 85 (106)
T ss_dssp CTTSCHH----HHTTCCTTCEEEEESSCBCSSS-CHHHHHHHHHS-CBSCEEEEEEECC
T ss_pred CCCCHHH----HCCCCCCCCEEEEECCEECCCC-CHHHHHHHHhC-CCCeEEEEEEeCC
Confidence 4789999 999 999999999999876543 35566666665 4467999999965
No 177
>2qt5_A Glutamate receptor-interacting protein 1; PDZ-peptide complex, PDZ tandem, alternative splicing, cell junction, cytoplasm; 2.30A {Rattus norvegicus}
Probab=98.84 E-value=7.6e-09 Score=70.48 Aligned_cols=52 Identities=21% Similarity=0.220 Sum_probs=41.7
Q ss_pred CCCCCcccccccc-CCCCCCEEEEECCeecCCcccHHHHHHHHHhCCCceEEEEEEeCC
Q psy12583 8 SEGYPRQDVDVYQ-GLVKDDIILEFGPINSSNFKSLQDIASTVRAGVNTDIPITVLRNE 65 (96)
Q Consensus 8 ~~~~pa~~~~~~a-GLk~GD~Il~vng~~~~~~~~~~di~~~i~~~~g~~i~l~V~R~g 65 (96)
.+|+||+ +| ||++||+|++|||+++.++. ..++..+++. .+.++.|+|.|++
T Consensus 41 ~~~spA~----~aggl~~GD~I~~vng~~v~~~~-~~~~~~~~~~-~g~~v~l~v~R~~ 93 (200)
T 2qt5_A 41 RQGGIAA----RSDQLDVGDYIKAVNGINLAKFR-HDEIISLLKN-VGERVVLEVEYEL 93 (200)
T ss_dssp CTTSHHH----HTTSCCTTCEEEEETTEECTTSC-HHHHHHHHHT-CCSEEEEEEEEEC
T ss_pred CCCChHH----hcCCCCCCCEEEEECCEECCCCC-HHHHHHHHHh-CCCeEEEEEeccC
Confidence 4789999 99 99999999999998754432 2777777765 4679999999965
No 178
>3gsl_A Disks large homolog 4; PDZ domain, tandem, PSD-95, DLG4, SAP-90, GLUR6, cell juncti membrane, lipoprotein, membrane, palmitate, phosphoprotein; 2.05A {Rattus norvegicus} PDB: 3zrt_A 2ka9_A
Probab=98.83 E-value=4.7e-09 Score=70.45 Aligned_cols=52 Identities=15% Similarity=0.236 Sum_probs=40.7
Q ss_pred CCCCCccccccccC-CCCCCEEEEECCeecCCcccHHHHHHHHHhCCCceEEEEEEeCC
Q psy12583 8 SEGYPRQDVDVYQG-LVKDDIILEFGPINSSNFKSLQDIASTVRAGVNTDIPITVLRNE 65 (96)
Q Consensus 8 ~~~~pa~~~~~~aG-Lk~GD~Il~vng~~~~~~~~~~di~~~i~~~~g~~i~l~V~R~g 65 (96)
.+|+||+ +|| |++||+|++|||+++.++. +.+....++. .+..+.++|.|++
T Consensus 43 ~~~spA~----~aG~l~~GD~I~~vng~~v~~~~-~~~~~~~~~~-~g~~v~l~v~r~~ 95 (196)
T 3gsl_A 43 IPGGAAA----QDGRLRVNDSILFVNEVDVREVT-HSAAVEALKE-AGSIVRLYVMRRK 95 (196)
T ss_dssp CTTSHHH----HHCCCCTTCEEEEETTEECTTCC-HHHHHHHHHT-SCSEEEEEEEEEC
T ss_pred CCCChHH----hcCCCCCCCEEEEECCEECCCCC-HHHHHHHHHh-CCCcEEEEEEecC
Confidence 5889999 999 9999999999998865543 3344444544 5789999999976
No 179
>1p1d_A PDZ45, glutamate receptor interacting protein; PDZ domain, tandem repeats, scaffold protein, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1 b.36.1.1 PDB: 1p1e_A 1x5r_A
Probab=98.83 E-value=4.9e-09 Score=71.43 Aligned_cols=52 Identities=17% Similarity=0.279 Sum_probs=45.1
Q ss_pred CCCCCccccccccC-CCCCCEEEEECCeecCCcccHHHHHHHHHhCCCceEEEEEEeCC
Q psy12583 8 SEGYPRQDVDVYQG-LVKDDIILEFGPINSSNFKSLQDIASTVRAGVNTDIPITVLRNE 65 (96)
Q Consensus 8 ~~~~pa~~~~~~aG-Lk~GD~Il~vng~~~~~~~~~~di~~~i~~~~g~~i~l~V~R~g 65 (96)
.+++||+ ++| |++||+|++|||.++.+ .+|.++.++++.+ +.++.|+|+|++
T Consensus 143 ~~~s~A~----~aG~l~~GD~I~~vng~~v~~-~~~~~~~~~l~~~-~~~v~l~v~R~~ 195 (196)
T 1p1d_A 143 KKGSVAH----RTGTLELGDKLLAIDNIRLDS-CSMEDAVQILQQC-EDLVKLKIRKDE 195 (196)
T ss_dssp CSSSHHH----HTSCCCTTCEEEEETTEEGGG-CCHHHHHHHHHHC-TTCEEEEEECCC
T ss_pred CCCCcHH----hcCCCCCCCEEEEECCEECCC-CCHHHHHHHHHhC-CCEEEEEEEeCC
Confidence 4789999 999 99999999999977433 2399999999987 889999999986
No 180
>1uju_A Scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.81 E-value=8.1e-10 Score=69.33 Aligned_cols=52 Identities=15% Similarity=0.109 Sum_probs=44.3
Q ss_pred CCCCCccccccccC-CCCCCEEEEECCeecCCcccHHHHHHHHHhCCCceEEEEEEeCC
Q psy12583 8 SEGYPRQDVDVYQG-LVKDDIILEFGPINSSNFKSLQDIASTVRAGVNTDIPITVLRNE 65 (96)
Q Consensus 8 ~~~~pa~~~~~~aG-Lk~GD~Il~vng~~~~~~~~~~di~~~i~~~~g~~i~l~V~R~g 65 (96)
.+++||+ ++| |++||+|++|||+++.+. +|.++..+++. .+.++.|+|.|+.
T Consensus 52 ~~~spA~----~aG~L~~GD~Il~vng~~v~~~-~~~~~~~~l~~-~g~~v~l~v~r~~ 104 (111)
T 1uju_A 52 SPTGAAG----RDGRLRVGLRLLEVNQQSLLGL-THGEAVQLLRS-VGDTLTVLVCDGF 104 (111)
T ss_dssp CTTSHHH----HHSSCCTTCBCCBBSSCBCTTS-CHHHHHHHHSS-CSSEEEECCCCCC
T ss_pred CCCCHHH----HcCCCCCCCEEEEECCEECCCC-CHHHHHHHHHc-CCCeEEEEEEECC
Confidence 4789999 999 999999999999775443 78888888876 5789999999976
No 181
>1um7_A Synapse-associated protein 102; PDZ, discs large homolog 3, DLG3-human presynaptic protein, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.77 E-value=1.3e-08 Score=63.59 Aligned_cols=52 Identities=21% Similarity=0.310 Sum_probs=42.4
Q ss_pred CCCCCccccccccC-CCCCCEEEEECCeecCCcccHHHHHHHHHhCCCceEEEEEEeCC
Q psy12583 8 SEGYPRQDVDVYQG-LVKDDIILEFGPINSSNFKSLQDIASTVRAGVNTDIPITVLRNE 65 (96)
Q Consensus 8 ~~~~pa~~~~~~aG-Lk~GD~Il~vng~~~~~~~~~~di~~~i~~~~g~~i~l~V~R~g 65 (96)
.+++||+ ++| |++||+|++|||+++.++. +.++...++. .+..+.|+|.|++
T Consensus 47 ~~~s~A~----~aG~L~~GD~Il~Vng~~v~~~~-~~~~~~~~~~-~~~~v~l~v~r~~ 99 (113)
T 1um7_A 47 LAGGPAD----LSGELRRGDRILSVNGVNLRNAT-HEQAAAALKR-AGQSVTIVAQYRP 99 (113)
T ss_dssp CSSSHHH----HTTCCCTTCEEEEESSCBCTTCC-HHHHHHHHHS-CCSEEEEEEECCH
T ss_pred CCCCHHH----HcCCCCCCCEEEEECCEECCCCC-HHHHHHHHHh-CCCcEEEEEEECc
Confidence 3789999 999 9999999999998765543 4677777764 5789999999976
No 182
>3tsz_A Tight junction protein ZO-1; PDZ3-SH3-GUK, scaffolding, JAM, tight junction, cell adhesio; 2.50A {Homo sapiens} PDB: 3tsw_A 3lh5_A
Probab=98.76 E-value=8.3e-09 Score=77.87 Aligned_cols=53 Identities=17% Similarity=0.248 Sum_probs=46.9
Q ss_pred CCCCCccccccccCCCCCCEEEEECCeecCCcccHHHHHHHHHh-CCCceEEEEEEeCC
Q psy12583 8 SEGYPRQDVDVYQGLVKDDIILEFGPINSSNFKSLQDIASTVRA-GVNTDIPITVLRNE 65 (96)
Q Consensus 8 ~~~~pa~~~~~~aGLk~GD~Il~vng~~~~~~~~~~di~~~i~~-~~g~~i~l~V~R~g 65 (96)
.+|+||+ +|||++||+|++|||.++.+. +++++..+++. .+|.+++|+|.|++
T Consensus 39 ~~gspA~----~aGL~~GD~Il~VnG~~v~~~-~~~e~~~~l~~~~~g~~v~l~v~r~~ 92 (391)
T 3tsz_A 39 LEDSPAA----KEGLEEGDQILRVNNVDFTNI-IREEAVLFLLDLPKGEEVTILAQKKK 92 (391)
T ss_dssp CTTCHHH----HTTCCTTEEEEEETTEECTTC-CHHHHHHHHHHSCTTSEEEEEEEECH
T ss_pred CCCCHHH----HcCCCCCCEEEEECCEECCCC-CHHHHHHHHHhhcCCCeEEEEEeeCC
Confidence 5799999 999999999999999886443 68999999987 68899999999976
No 183
>2z17_A Pleckstrin homology SEC7 and coiled-coil domains- binding protein; PDZ domain, cytoplasm, membrane, polymorphism, protein binding; 2.70A {Homo sapiens}
Probab=98.76 E-value=4.2e-09 Score=65.32 Aligned_cols=48 Identities=19% Similarity=0.421 Sum_probs=40.1
Q ss_pred CCCCCccccccccCCCCCCEEEEECCeecCCcccHHHHHHHHHhCCCceEEEEE
Q psy12583 8 SEGYPRQDVDVYQGLVKDDIILEFGPINSSNFKSLQDIASTVRAGVNTDIPITV 61 (96)
Q Consensus 8 ~~~~pa~~~~~~aGLk~GD~Il~vng~~~~~~~~~~di~~~i~~~~g~~i~l~V 61 (96)
.+++||+ ++||++||+|++|||.++..+ ++.++.++++..++ ++.|+|
T Consensus 56 ~~~spA~----~aGl~~GD~I~~vng~~v~~~-~~~~~~~~l~~~~~-~v~l~v 103 (104)
T 2z17_A 56 QEDSPAH----CAGLQAGDVLANINGVSTEGF-TYKQVVDLIRSSGN-LLTIET 103 (104)
T ss_dssp CTTSHHH----HHTCCTTCBCCEETTEECTTC-CHHHHHHHHHHTTT-EEEEEC
T ss_pred CCCChHH----HcCCCCCCEEEEECCEEcCCC-CHHHHHHHHHhCCC-cEEEEE
Confidence 4789999 999999999999999875332 78999999998865 777765
No 184
>2csj_A TJP2 protein; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.75 E-value=1.1e-08 Score=64.68 Aligned_cols=51 Identities=16% Similarity=0.094 Sum_probs=42.0
Q ss_pred CCCCCccccccccCCCCCCEEEEECCeecCCcccHHHHHHHHHhCCCceEEEEEEeCC
Q psy12583 8 SEGYPRQDVDVYQGLVKDDIILEFGPINSSNFKSLQDIASTVRAGVNTDIPITVLRNE 65 (96)
Q Consensus 8 ~~~~pa~~~~~~aGLk~GD~Il~vng~~~~~~~~~~di~~~i~~~~g~~i~l~V~R~g 65 (96)
.+++||+ +||++||+|++|||+++.+. ++.++..+++. .+.++.|+|.|.+
T Consensus 54 ~~~spA~-----~gL~~GD~I~~Vng~~v~~~-~~~~~~~~l~~-~~~~v~l~v~R~~ 104 (117)
T 2csj_A 54 LPGGPAD-----GLLQENDRVVMVNGTPMEDV-LHSFAVQQLRK-SGKIAAIVVKRPR 104 (117)
T ss_dssp CTTSSHH-----HHBCTTCEEEEESSCBCBTC-CHHHHHHHHHH-SCSEEEEEEEEEE
T ss_pred CCCCccc-----ccCCCCCEEEEECCEECCCc-CHHHHHHHHhc-CCCeEEEEEEECC
Confidence 4688886 89999999999999776443 46777788887 5789999999976
No 185
>3suz_A Amyloid beta A4 precursor protein-binding family 2; APP binding; 2.70A {Rattus norvegicus} PDB: 1u3b_A 1u39_A 1x45_A 1u37_A 1u38_A 2yt8_A
Probab=98.71 E-value=6.5e-09 Score=78.17 Aligned_cols=74 Identities=12% Similarity=0.176 Sum_probs=45.2
Q ss_pred CCCCCccccccccC-CCCCCEEEEECCeecCCcccHHHHHHHHHhC-CCceEEEEEEeCCceEEEEEEeecCCCCeeeEE
Q psy12583 8 SEGYPRQDVDVYQG-LVKDDIILEFGPINSSNFKSLQDIASTVRAG-VNTDIPITVLRNEGTRQRLVLRPQPFEGQGLVG 85 (96)
Q Consensus 8 ~~~~pa~~~~~~aG-Lk~GD~Il~vng~~~~~~~~~~di~~~i~~~-~g~~i~l~V~R~g~~~~~l~v~p~~~~~~~~lG 85 (96)
.+|+||+ +|| |++||+|++|||.++.++. ..++..+++.. .+.++.|+|.|++ ...++.+.... ..+.||
T Consensus 240 ~~gspA~----~aG~L~~GD~Il~VnG~~v~~~~-~~~~~~~l~~~~~~~~v~l~v~r~~-~~~~v~l~~~~--~~~~lG 311 (388)
T 3suz_A 240 MNGGPAA----RSGKLSIGDQIMSINGTSLVGLP-LATCQGIIKGLKNQTQVKLNIVSCP-PVTTVLIKRPD--LKYQLG 311 (388)
T ss_dssp CCSSHHH----HTCCCCTTCEEEEETTEECSSCC-STTHHHHTTTCTTCSCEEEEEEECC-SCC----------------
T ss_pred CCCCHHH----HcCCCCCCCEEEEECCEEccCCC-HHHHHHHHHhccCCCcccccccccc-ccceeeEeecC--CCCccc
Confidence 5789999 999 9999999999998754442 15667778776 5568999999998 76666653221 234467
Q ss_pred EEEe
Q psy12583 86 CYFL 89 (96)
Q Consensus 86 i~~~ 89 (96)
+.+.
T Consensus 312 ~~i~ 315 (388)
T 3suz_A 312 FSVQ 315 (388)
T ss_dssp ----
T ss_pred eEEe
Confidence 6554
No 186
>1tp5_A Presynaptic density protein 95; PDZ-peptide ligand complex, peptide binding protein; 1.54A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1tp3_A 1tq3_A 1be9_A 1bfe_A
Probab=98.68 E-value=2.6e-08 Score=62.94 Aligned_cols=52 Identities=21% Similarity=0.297 Sum_probs=40.3
Q ss_pred CCCCCccccccccC-CCCCCEEEEECCeecCCcccHHHHHHHHHhCCCceEEEEEEeCC
Q psy12583 8 SEGYPRQDVDVYQG-LVKDDIILEFGPINSSNFKSLQDIASTVRAGVNTDIPITVLRNE 65 (96)
Q Consensus 8 ~~~~pa~~~~~~aG-Lk~GD~Il~vng~~~~~~~~~~di~~~i~~~~g~~i~l~V~R~g 65 (96)
.+|+||+ +|| |++||+|++|||.++.++.. .+....++. .+.++.++|.|++
T Consensus 46 ~~~spA~----~aG~L~~GD~I~~vng~~v~~~~~-~~~~~~~~~-~~~~v~l~v~r~~ 98 (119)
T 1tp5_A 46 LAGGPAD----LSGELRKGDQILSVNGVDLRNASH-EQAAIALKN-AGQTVTIIAQYKP 98 (119)
T ss_dssp CTTSHHH----HHSCCCTTEEEEEETTEECTTCCH-HHHHHHHHT-SCSEEEEEEEECH
T ss_pred CCCCHHH----HcCCCCCCCEEEEECCEECCCCCH-HHHHHHHHc-CCCeEEEEEEECC
Confidence 4789999 999 99999999999988655532 333344443 5789999999976
No 187
>3r0h_A INAD, inactivation-NO-after-potential D protein; protein-protein complex, PDZ domain, peptide binding protein; 2.60A {Drosophila melanogaster}
Probab=98.68 E-value=3.5e-08 Score=67.18 Aligned_cols=52 Identities=19% Similarity=0.268 Sum_probs=43.0
Q ss_pred CCCCCccccccccC-CCCCCEEEEECCeecCCcccHHHHHHHHHhCCCceEEEEEEeCC
Q psy12583 8 SEGYPRQDVDVYQG-LVKDDIILEFGPINSSNFKSLQDIASTVRAGVNTDIPITVLRNE 65 (96)
Q Consensus 8 ~~~~pa~~~~~~aG-Lk~GD~Il~vng~~~~~~~~~~di~~~i~~~~g~~i~l~V~R~g 65 (96)
.+|+||+ ++| |++||+|++|||+++.++ ++.++..+++. .+.++.|+|.|..
T Consensus 144 ~~gs~A~----~aG~L~~GD~Il~VNg~~v~~~-~~~~~~~~l~~-~~~~v~L~V~R~~ 196 (206)
T 3r0h_A 144 IQGQYPE----IDSKLQRGDIITKFNGDALEGL-PFQVCYALFKG-ANGKVSMEVTRPK 196 (206)
T ss_dssp CTTSCHH----HHHHCCTTCEEEEETTEECTTC-CHHHHHHHHHT-CCSEEEEEEEEEC
T ss_pred CCCChHH----HcCCCCCCCEEEEECCEECCCC-CHHHHHHHHHc-CCCeEEEEEEeCC
Confidence 4789999 999 999999999999886554 45778888876 4568999999955
No 188
>2krg_A Na(+)/H(+) exchange regulatory cofactor NHE-RF1; acetylation, cell projection, disease mutation, membrane, phosphoprotein, polymorphism; NMR {Homo sapiens}
Probab=98.67 E-value=4.4e-10 Score=78.99 Aligned_cols=62 Identities=23% Similarity=0.317 Sum_probs=50.5
Q ss_pred CCCCCccccccccCCCCCCEEEEECCeecCCcccHHHHHHHHHhCCCceE-EEEEEeCCceEE--EEEEeec
Q psy12583 8 SEGYPRQDVDVYQGLVKDDIILEFGPINSSNFKSLQDIASTVRAGVNTDI-PITVLRNEGTRQ--RLVLRPQ 76 (96)
Q Consensus 8 ~~~~pa~~~~~~aGLk~GD~Il~vng~~~~~~~~~~di~~~i~~~~g~~i-~l~V~R~g~~~~--~l~v~p~ 76 (96)
.+|+||+ ++||++||+|++|||+++... +|.++..+++.. +..+ .++|.|++ +.+ .+.++|.
T Consensus 41 ~~gSpA~----~aGL~~GD~Il~VNG~~V~~~-s~~dl~~~l~~~-g~~v~~l~V~R~g-~~~~~~v~v~p~ 105 (216)
T 2krg_A 41 DPDSPAE----ASGLRAQDRIVEVNGVCMEGK-QHGDVVSAIRAG-GDETKLLVVDRET-DEFFKKCRVIPS 105 (216)
T ss_dssp CTTSHHH----HHTCCTTCBCCEETTEECTTC-CTHHHHHHHHHH-CSEEEEEECCHHH-HHHHHHHTCCCC
T ss_pred CCCChHH----HcCCCCCCEEEEECCEECCCC-CHHHHHHHHHhc-CCeEEEEEEEECC-EEEEEEEEEEEe
Confidence 4789999 999999999999999875322 788999999876 7788 99999988 665 5555554
No 189
>3k50_A Putative S41 protease; structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}
Probab=98.61 E-value=1.2e-08 Score=77.35 Aligned_cols=49 Identities=14% Similarity=0.180 Sum_probs=41.7
Q ss_pred CCCCCccccccccCCCCCCEEEEECCeecCCcccHHHHHHHHHhCCCceEEEEEEeCC
Q psy12583 8 SEGYPRQDVDVYQGLVKDDIILEFGPINSSNFKSLQDIASTVRAGVNTDIPITVLRNE 65 (96)
Q Consensus 8 ~~~~pa~~~~~~aGLk~GD~Il~vng~~~~~~~~~~di~~~i~~~~g~~i~l~V~R~g 65 (96)
.+||||+ +|||++||+|++|||.++ .+|+ +..+++. ++.+++|++.|++
T Consensus 98 ~~gsPA~----~AGL~~GD~I~~InG~~v---~~~~-~~~~l~~-~g~~v~l~v~R~g 146 (403)
T 3k50_A 98 VPGSPAE----EAGLQRGHWIMMMNGDYI---TKKV-ESELLQG-STRQLQIGVYKEV 146 (403)
T ss_dssp CTTSHHH----HTTCCTTCEEEEETTBCB---CTTT-GGGGTSC-SCEEEEEEEEEEE
T ss_pred CCCChHH----HcCCCCCCEEEEECCEEc---cchh-HHHHhhC-CCCEEEEEEEeCC
Confidence 5899999 999999999999999764 4443 5677777 8899999999987
No 190
>1ky9_A Protease DO, DEGP, HTRA; protein quality control, serine protease, trypsin, chaperone, PDZ, ATP-independent, temperature-regulated, periplasm; 2.80A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3ou0_A 4a8d_A 3otp_A 3mh7_A 3mh4_A 3mh5_A* 3mh6_A* 3cs0_A 2zle_A
Probab=98.60 E-value=5.1e-09 Score=80.09 Aligned_cols=57 Identities=18% Similarity=0.358 Sum_probs=0.0
Q ss_pred CCCCCccccccccCCCCCCEEEEECCeecCCcccHHHHHHHHHhCCCceEEEEEEeCCceEEEEEE
Q psy12583 8 SEGYPRQDVDVYQGLVKDDIILEFGPINSSNFKSLQDIASTVRAGVNTDIPITVLRNEGTRQRLVL 73 (96)
Q Consensus 8 ~~~~pa~~~~~~aGLk~GD~Il~vng~~~~~~~~~~di~~~i~~~~g~~i~l~V~R~g~~~~~l~v 73 (96)
.++|||+ ++||++||+|++|||.+ +.+|.++.++++.+++ .+.|+|.|++ +.+.+.+
T Consensus 391 ~~gspA~----~aGL~~GDiI~~vng~~---v~~~~~l~~~l~~~~~-~v~l~v~R~g-~~~~~~l 447 (448)
T 1ky9_A 391 KTGTPAA----QIGLKKGDVIIGANQQA---VKNIAELRKVLDSKPS-VLALNIQRGD-STIYLLM 447 (448)
T ss_dssp ------------------------------------------------------------------
T ss_pred cCCCHHH----HcCCCCCCEEEEECCEE---CCCHHHHHHHHHcCCC-eEEEEEEECC-EEEEEEe
Confidence 4689999 99999999999999965 5678888899987665 8999999999 7766654
No 191
>1z87_A Alpha-1-syntrophin; protein binding; NMR {Mus musculus}
Probab=98.60 E-value=4e-08 Score=70.97 Aligned_cols=52 Identities=13% Similarity=0.193 Sum_probs=44.6
Q ss_pred CCCCCccccccc-cCCCCCCEEEEECCeecCCcccHHHHHHHHHhCCCceEEEEEEeCC
Q psy12583 8 SEGYPRQDVDVY-QGLVKDDIILEFGPINSSNFKSLQDIASTVRAGVNTDIPITVLRNE 65 (96)
Q Consensus 8 ~~~~pa~~~~~~-aGLk~GD~Il~vng~~~~~~~~~~di~~~i~~~~g~~i~l~V~R~g 65 (96)
.+|+||+ + +||++||+|++|||+++.+. ++.++..+++.. +..+.|+|+|.+
T Consensus 111 ~~gspA~----~~aGL~~GD~Il~VNG~~v~~~-t~~e~v~~l~~~-g~~V~L~V~R~~ 163 (263)
T 1z87_A 111 FKGLAAD----QTEALFVGDAILSVNGEDLSSA-THDEAVQALKKT-GKEVVLEVKYMK 163 (263)
T ss_dssp CTTSHHH----HCTTCCSSCEEEEESSCBCTTS-CHHHHHHHHHHC-CSCCCEEEECCS
T ss_pred CCCCHHH----HhCCCCCCCEEEEECCEECCCc-CHHHHHHHHhcC-CCeEEEEEEeCc
Confidence 4799999 9 79999999999999876554 578888999886 678999999977
No 192
>2lob_A Golgi-associated PDZ and coiled-coil motif-contai protein; structural protein-hydrolase complex, peptide binding protei; NMR {Homo sapiens}
Probab=98.02 E-value=5.5e-09 Score=66.25 Aligned_cols=49 Identities=20% Similarity=0.316 Sum_probs=37.8
Q ss_pred CCCCCccccccc-cCCCCCCEEEEECCeecCCcccHHHHHHHHHhCCCceEEEEEE
Q psy12583 8 SEGYPRQDVDVY-QGLVKDDIILEFGPINSSNFKSLQDIASTVRAGVNTDIPITVL 62 (96)
Q Consensus 8 ~~~~pa~~~~~~-aGLk~GD~Il~vng~~~~~~~~~~di~~~i~~~~g~~i~l~V~ 62 (96)
.+|+||+ + +||++||+|++|||.++.+ .++.++..+++... ..++|+|.
T Consensus 61 ~~~spA~----~~aGL~~GD~Il~ING~~v~~-~~~~~~~~~l~~~~-~~v~l~V~ 110 (112)
T 2lob_A 61 HPGQPAD----RCGGLHVGDAILAVNGVNLRD-TKHKEAVTILSQQR-GEIEFEVV 110 (112)
Confidence 4789999 9 9999999999999977533 36778888887644 34777664
No 193
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=98.57 E-value=9e-08 Score=77.80 Aligned_cols=61 Identities=15% Similarity=0.126 Sum_probs=50.1
Q ss_pred CCCCCccccccccC--CCCCCEEEEECCeecCCcccHHHHHHHHHhCCCceEEEEEEeCCceEEEEEEeec
Q psy12583 8 SEGYPRQDVDVYQG--LVKDDIILEFGPINSSNFKSLQDIASTVRAGVNTDIPITVLRNEGTRQRLVLRPQ 76 (96)
Q Consensus 8 ~~~~pa~~~~~~aG--Lk~GD~Il~vng~~~~~~~~~~di~~~i~~~~g~~i~l~V~R~g~~~~~l~v~p~ 76 (96)
.+++||+ +|| |+ ||+|++|||.++.. +.++...++...|.+++|+|.|++.+.++++++|.
T Consensus 764 ~~~spa~----~ag~~l~-GD~I~~i~g~~~~~---~~~~~~~~~~~~g~~v~l~v~r~~~~~~~~~~~~~ 826 (1045)
T 1k32_A 764 GEKSPIF----EYGIDPT-GYLIEDIDGETVGA---GSNIYRVLSEKAGTSARIRLSGKGGDKRDLMIDIL 826 (1045)
T ss_dssp TCBCGGG----GGTCCCT-TCEEEEETTEECBT---TBCHHHHHHTTTTSEEEEEEECSSSCEEEEEEECB
T ss_pred cCCChHH----HCCCCcC-CCEEEEECCEEccc---hhhHHHhhcCCCCCEEEEEEECCCCceEEEEEEEc
Confidence 3569999 999 99 99999999987544 44677889998999999999998734667778763
No 194
>3shw_A Tight junction protein ZO-1; PDZ-SH3-GUK supramodule, cell adhesion; 2.90A {Homo sapiens}
Probab=98.56 E-value=6.6e-08 Score=74.72 Aligned_cols=53 Identities=17% Similarity=0.231 Sum_probs=45.9
Q ss_pred CCCCCccccccccCCCCCCEEEEECCeecCCcccHHHHHHHHHhC-CCceEEEEEEeCC
Q psy12583 8 SEGYPRQDVDVYQGLVKDDIILEFGPINSSNFKSLQDIASTVRAG-VNTDIPITVLRNE 65 (96)
Q Consensus 8 ~~~~pa~~~~~~aGLk~GD~Il~vng~~~~~~~~~~di~~~i~~~-~g~~i~l~V~R~g 65 (96)
.+|+||+ +|||++||+|++|||+++.+. +++++..+|+.. +|.+++|+|.|++
T Consensus 31 ~~gspA~----~aGL~~GD~Il~VNG~~v~~~-t~~e~~~~L~~~~~g~~v~L~V~r~g 84 (468)
T 3shw_A 31 LEDSPAA----KEGLEEGDQILRVNNVDFTNI-IREEAVLFLLDLPKGEEVTILAQKKK 84 (468)
T ss_dssp CSSSHHH----HTTCCTTEEEEEETTEECTTC-CHHHHHHHHHHSCTTSEEEEEEEECH
T ss_pred CCCCHHH----HcCCCCCCEEEEECCEECCCC-CHHHHHHHHHhcCCCCEEEEEEEECC
Confidence 4899999 999999999999999875443 588999999874 6789999999976
No 195
>4fln_A Protease DO-like 2, chloroplastic; protease, DEG, PDZ, hydrolase; 2.80A {Arabidopsis thaliana}
Probab=98.40 E-value=1.2e-06 Score=68.71 Aligned_cols=63 Identities=10% Similarity=0.086 Sum_probs=48.0
Q ss_pred CCCCCccccccccCCCCCCEEEEECCeecCCccc-------HHHHHHHHH-hCCCceEEEEEEeCCceEEEEEEeec
Q psy12583 8 SEGYPRQDVDVYQGLVKDDIILEFGPINSSNFKS-------LQDIASTVR-AGVNTDIPITVLRNEGTRQRLVLRPQ 76 (96)
Q Consensus 8 ~~~~pa~~~~~~aGLk~GD~Il~vng~~~~~~~~-------~~di~~~i~-~~~g~~i~l~V~R~g~~~~~l~v~p~ 76 (96)
.+++||+ ++ |++||.|++|||..+.+..+ ..++..++. ..+|..++|+|.|+| +.++++++..
T Consensus 285 ~~~spA~----~a-l~~GDvI~~idg~~V~~~g~~~~~~~~~~~l~~~v~~~~~Gd~v~l~v~R~G-k~~~v~Vtl~ 355 (539)
T 4fln_A 285 EPTSDAS----KV-LKEGDVIVSFDDLHVGCEGTVPFRSSERIAFRYLISQKFAGDIAEIGIIRAG-EHKKVQVVLR 355 (539)
T ss_dssp CTTSGGG----GT-CCTTCEEEEETTEECBSSSEEECSTTCEEETHHHHHTSCTTCEEEEEEEETT-EEEEEEEECB
T ss_pred cCCChHH----hC-ccCCCEEEEECCEEeCcCCeeccccchhHHHHHHHHcCCCCCEEEEEEEECC-EEEEEEEEEc
Confidence 4789999 76 99999999999988654321 112344554 457899999999999 8888888764
No 196
>1w9e_A Syntenin 1; cell adhesion, adhesion/complex, PDZ domain, scaffolding protein signaling protein; 1.56A {Homo sapiens} SCOP: b.36.1.1 b.36.1.1 PDB: 1n99_A 1v1t_A 1obz_A 1w9o_A 1w9q_A 1ybo_A
Probab=98.38 E-value=1.9e-08 Score=66.91 Aligned_cols=50 Identities=16% Similarity=0.201 Sum_probs=36.6
Q ss_pred CCCCCccccccccCCCCCCEEEEECCeecCCcccHHHHHHHHHhCCCceEEEEEEeCCceEEEEEEee
Q psy12583 8 SEGYPRQDVDVYQGLVKDDIILEFGPINSSNFKSLQDIASTVRAGVNTDIPITVLRNEGTRQRLVLRP 75 (96)
Q Consensus 8 ~~~~pa~~~~~~aGLk~GD~Il~vng~~~~~~~~~~di~~~i~~~~g~~i~l~V~R~g~~~~~l~v~p 75 (96)
.+++||+ ++||++||+|++|||.++.++ .++++.++++|++ +.+.+.++|
T Consensus 115 ~~~s~a~----~aGl~~GD~I~~ing~~v~~~-------------~~~~v~~~v~r~g-~~~~l~v~~ 164 (166)
T 1w9e_A 115 VKDSSAA----RNGLLTEHNICEINGQNVIGL-------------KDSQIADILSTSG-TVVTITIMP 164 (166)
T ss_dssp CTTSHHH----HTTCCSSEEEEEETTEECTTC-------------CHHHHHHHHHHSC-SEEEEEEEE
T ss_pred ccCCHHH----HcCCCCCCEEEEECCEECCCC-------------ChHHHHHHHhhCC-CEEEEEEEE
Confidence 4789999 999999999999999876444 2334445556666 666666665
No 197
>2xkx_A Disks large homolog 4; structural protein, scaffold protein, membrane associated GU kinase; 22.9A {Rattus norvegicus}
Probab=98.23 E-value=2.1e-06 Score=68.79 Aligned_cols=54 Identities=17% Similarity=0.227 Sum_probs=44.4
Q ss_pred CCCCCccccccccC-CCCCCEEEEECCeecCCcccHHHHHHHHHhCCCceEEEEEEeCCceE
Q psy12583 8 SEGYPRQDVDVYQG-LVKDDIILEFGPINSSNFKSLQDIASTVRAGVNTDIPITVLRNEGTR 68 (96)
Q Consensus 8 ~~~~pa~~~~~~aG-Lk~GD~Il~vng~~~~~~~~~~di~~~i~~~~g~~i~l~V~R~g~~~ 68 (96)
.+|+||+ ++| |++||+|++|||.++.++. +.++...++.. +..+.|+|.|++ ..
T Consensus 192 ~~gs~A~----~aG~L~~GD~Il~Vng~~v~~~~-~~~~~~~l~~~-~~~v~l~V~R~g-~~ 246 (721)
T 2xkx_A 192 IEGGAAH----KDGRLQIGDKILAVNSVGLEDVM-HEDAVAALKNT-YDVVYLKVAKPS-NA 246 (721)
T ss_pred CCCCchh----hcCCCCCCCEEEEECCeeCCCCC-HHHHHHHHHcC-CCeEEEEEEeCC-cc
Confidence 4789999 999 9999999999998865543 57777777654 679999999988 54
No 198
>2xkx_A Disks large homolog 4; structural protein, scaffold protein, membrane associated GU kinase; 22.9A {Rattus norvegicus}
Probab=98.15 E-value=3.6e-06 Score=67.49 Aligned_cols=52 Identities=23% Similarity=0.302 Sum_probs=44.1
Q ss_pred CCCCCccccccccC-CCCCCEEEEECCeecCCcccHHHHHHHHHhCCCceEEEEEEeCC
Q psy12583 8 SEGYPRQDVDVYQG-LVKDDIILEFGPINSSNFKSLQDIASTVRAGVNTDIPITVLRNE 65 (96)
Q Consensus 8 ~~~~pa~~~~~~aG-Lk~GD~Il~vng~~~~~~~~~~di~~~i~~~~g~~i~l~V~R~g 65 (96)
.+|+||+ ++| |++||+|++|||.++.+. +++++..+++.. +..+.|.|.|+.
T Consensus 339 ~~gs~A~----~aG~L~~GD~Il~VNg~~v~~~-~~~e~~~~l~~~-~~~v~L~v~r~~ 391 (721)
T 2xkx_A 339 LAGGPAD----LSGELRKGDQILSVNGVDLRNA-SHEQAAIALKNA-GQTVTIIAQYKP 391 (721)
T ss_pred CCCChHH----hcCCCccCCEEEEECCEECCCC-CHHHHHHHHHhc-CCeEEEEEEeCc
Confidence 4789999 999 999999999999876443 588999999875 568999999875
No 199
>3gge_A PDZ domain-containing protein GIPC2; structural genomics, structural genomics consort protein binding; 2.60A {Homo sapiens}
Probab=98.10 E-value=9.1e-06 Score=50.55 Aligned_cols=53 Identities=11% Similarity=0.100 Sum_probs=40.9
Q ss_pred CCCCCccccccccC-CCCCCEEEEECCeecCCcccHHHHHHHHHhCC-CceEEEEEEeCC
Q psy12583 8 SEGYPRQDVDVYQG-LVKDDIILEFGPINSSNFKSLQDIASTVRAGV-NTDIPITVLRNE 65 (96)
Q Consensus 8 ~~~~pa~~~~~~aG-Lk~GD~Il~vng~~~~~~~~~~di~~~i~~~~-g~~i~l~V~R~g 65 (96)
.+|+||+ +.| |++||.|++|||+.+..+ +-.++.+++++.+ |.+++|++.+..
T Consensus 36 ~~gg~a~----r~g~L~vGD~I~~VNG~~v~g~-~h~evv~lLk~~~~g~~~~L~lv~p~ 90 (95)
T 3gge_A 36 KDGGVID----SVKTICVGDHIESINGENIVGW-RHYDVAKKLKELKKEELFTMKLIEPK 90 (95)
T ss_dssp CTTSHHH----HCTTCCTTCEEEEETTEECTTC-CHHHHHHHHHHSCTTCEEEEEEEEEC
T ss_pred cCCChHH----hcCCCCCCCEEEEECCEEccCC-CHHHHHHHHHhCCCCCEEEEEEECcc
Confidence 4678888 777 999999999999887665 4468889999865 467777766543
No 200
>3suz_A Amyloid beta A4 precursor protein-binding family 2; APP binding; 2.70A {Rattus norvegicus} PDB: 1u3b_A 1u39_A 1x45_A 1u37_A 1u38_A 2yt8_A
Probab=97.89 E-value=1.6e-06 Score=65.04 Aligned_cols=52 Identities=12% Similarity=0.126 Sum_probs=0.0
Q ss_pred CCCCCccccccccCCCCCCEEEEECCeecCCcccHHHHHHHHHhCCCceEEEEEEeCC
Q psy12583 8 SEGYPRQDVDVYQGLVKDDIILEFGPINSSNFKSLQDIASTVRAGVNTDIPITVLRNE 65 (96)
Q Consensus 8 ~~~~pa~~~~~~aGLk~GD~Il~vng~~~~~~~~~~di~~~i~~~~g~~i~l~V~R~g 65 (96)
.+|+||+ ++||++||+|++|||.++.+. +++++.+.++.. +..+.++|.+..
T Consensus 323 ~~gs~A~----~aGL~~GD~Il~VNg~~v~~~-s~~~~~~~l~~~-~~~v~L~V~p~~ 374 (388)
T 3suz_A 323 MRGGIAE----RGGVRVGHRIIEINGQSVVAT-AHEKIVQALSNS-VGEIHMKTMPAA 374 (388)
T ss_dssp ----------------------------------------------------------
T ss_pred ecCCHHH----HcCCCCCCEEEEECCEECCCC-CHHHHHHHHHhC-CCeEEEEEEecc
Confidence 4789999 999999999999999765332 567777888764 456777776644
No 201
>4fln_A Protease DO-like 2, chloroplastic; protease, DEG, PDZ, hydrolase; 2.80A {Arabidopsis thaliana}
Probab=97.18 E-value=0.00061 Score=53.45 Aligned_cols=47 Identities=9% Similarity=0.104 Sum_probs=40.1
Q ss_pred CCCCccccccccCCCCCCEEEEECCeecCCcccHHHHHHHHHhCCCceEEEEEE
Q psy12583 9 EGYPRQDVDVYQGLVKDDIILEFGPINSSNFKSLQDIASTVRAGVNTDIPITVL 62 (96)
Q Consensus 9 ~~~pa~~~~~~aGLk~GD~Il~vng~~~~~~~~~~di~~~i~~~~g~~i~l~V~ 62 (96)
++++|. .+|+++||.|++|||++ +.+..++.+++++..++-+.|+..
T Consensus 424 ~~s~a~----~~g~~~gdiI~~vNg~~---V~s~~~l~~~l~~~k~~~l~~~~~ 470 (539)
T 4fln_A 424 ANEVNI----GYEDMNNQQVLKFNGIP---IRNIHHLAHLIDMCKDKYLVFEFE 470 (539)
T ss_dssp CCGGGT----TCSSCCSEEEEEETTEE---CCSHHHHHHHHHTCCSSEEEEEET
T ss_pred CCchhh----hcCCCCCCEEEeECCEE---cCCHHHHHHHHHHcCCCeEEEEEC
Confidence 567788 89999999999999976 678889999999988887777754
No 202
>2pjh_A Protein NPL4, nuclear protein localization protein 4 homolog; UFD1, NPL4, AAA, protein binding, transport protein; NMR {Mus musculus}
Probab=50.29 E-value=9.3 Score=21.95 Aligned_cols=22 Identities=9% Similarity=0.206 Sum_probs=15.5
Q ss_pred CCCCCCCCCccccccccCCCCCCEEE
Q psy12583 4 PLVDSEGYPRQDVDVYQGLVKDDIIL 29 (96)
Q Consensus 4 ~~~~~~~~pa~~~~~~aGLk~GD~Il 29 (96)
+|...++.+-+ ..||+-||.|.
T Consensus 55 ~l~~~~~~~l~----~lgl~hGd~l~ 76 (80)
T 2pjh_A 55 EITASSSKSLH----LLKIKHGDLLF 76 (80)
T ss_dssp GSSSCCCCTTT----TTCCCTTCCEE
T ss_pred cccCCCCCCHH----HcCCCCCCEEE
Confidence 44444555666 77999999886
No 203
>2fei_A CD2-associated protein; CMS SH3 domain, structural protein; NMR {Homo sapiens}
Probab=42.75 E-value=26 Score=18.85 Aligned_cols=25 Identities=20% Similarity=-0.061 Sum_probs=18.1
Q ss_pred CCCCCCCCCccccccccCCCCCCEEEEEC
Q psy12583 4 PLVDSEGYPRQDVDVYQGLVKDDIILEFG 32 (96)
Q Consensus 4 ~~~~~~~~pa~~~~~~aGLk~GD~Il~vn 32 (96)
+|.|....... +..+++||.|.-+.
T Consensus 6 Alydy~~~~~~----eLs~~~Gd~i~v~~ 30 (65)
T 2fei_A 6 VLFEYIPQNED----ELELKVGDIIDINE 30 (65)
T ss_dssp CSSCCCCCSTT----BCCCCTTCEEECCC
T ss_pred ECccCCcCCcC----ccCCCCCCEEEEEE
Confidence 56676666556 67899999987554
No 204
>1jo8_A ABP1P, actin binding protein; SH3 domain actin-binding-protein, structural protein; 1.30A {Saccharomyces cerevisiae} SCOP: b.34.2.1 PDB: 2k3b_A 2rpn_A
Probab=41.56 E-value=22 Score=18.35 Aligned_cols=25 Identities=16% Similarity=0.189 Sum_probs=17.6
Q ss_pred CCCCCCCCCccccccccCCCCCCEEEEEC
Q psy12583 4 PLVDSEGYPRQDVDVYQGLVKDDIILEFG 32 (96)
Q Consensus 4 ~~~~~~~~pa~~~~~~aGLk~GD~Il~vn 32 (96)
+|.|....... +..+++||.|.-+.
T Consensus 5 al~dy~~~~~~----eLs~~~Gd~i~v~~ 29 (58)
T 1jo8_A 5 AEYDYDAAEDN----ELTFVENDKIINIE 29 (58)
T ss_dssp ESSCBCCCSTT----BCCBCTTCEEEEEE
T ss_pred ECceECCCCCC----CcccCCCCEEEEEE
Confidence 45566665555 67789999988765
No 205
>2a28_A BZZ1 protein; SH3 domain, signaling protein; 1.07A {Saccharomyces cerevisiae}
Probab=38.64 E-value=31 Score=17.44 Aligned_cols=25 Identities=16% Similarity=0.081 Sum_probs=17.3
Q ss_pred CCCCCCCCCccccccccCCCCCCEEEEEC
Q psy12583 4 PLVDSEGYPRQDVDVYQGLVKDDIILEFG 32 (96)
Q Consensus 4 ~~~~~~~~pa~~~~~~aGLk~GD~Il~vn 32 (96)
+|.+.+..... +.-+++||.|.-+.
T Consensus 5 al~dy~~~~~~----eLs~~~Gd~i~v~~ 29 (54)
T 2a28_A 5 AIYAYEAQGDD----EISIDPGDIITVIR 29 (54)
T ss_dssp BCSCBCCCSTT----BCCBCTTCEEEEEE
T ss_pred ECccCCcCCCC----CccCCCCCEEEEEE
Confidence 45566665555 56789999988764
No 206
>1yn8_A NBP2, NAP1-binding protein 2; SH3 domain, unknown function; 1.70A {Saccharomyces cerevisiae}
Probab=38.53 E-value=26 Score=17.99 Aligned_cols=25 Identities=24% Similarity=0.113 Sum_probs=16.4
Q ss_pred CCCCCCCCCccccccccCCCCCCEEEEEC
Q psy12583 4 PLVDSEGYPRQDVDVYQGLVKDDIILEFG 32 (96)
Q Consensus 4 ~~~~~~~~pa~~~~~~aGLk~GD~Il~vn 32 (96)
+|.|....... +..+++||.|.-+.
T Consensus 6 al~d~~~~~~~----eLs~~~Gd~i~v~~ 30 (59)
T 1yn8_A 6 ALYDFEPENDN----ELRLAEGDIVFISY 30 (59)
T ss_dssp ECSCBCCCSTT----BCCBCTTCEEEEEE
T ss_pred ECccCCCCCCC----CcCCCCCCEEEEEE
Confidence 45555555455 56788899887554
No 207
>1uti_A GRB2-related adaptor protein 2; signaling protein regulator, SH3 domain/complex, adaptor protein (MONA); 1.5A {Mus musculus} SCOP: b.34.2.1 PDB: 1h3h_A 1oeb_A 2w10_A 2d0n_A
Probab=37.83 E-value=28 Score=17.91 Aligned_cols=25 Identities=16% Similarity=0.252 Sum_probs=17.6
Q ss_pred CCCCCCCCCccccccccCCCCCCEEEEEC
Q psy12583 4 PLVDSEGYPRQDVDVYQGLVKDDIILEFG 32 (96)
Q Consensus 4 ~~~~~~~~pa~~~~~~aGLk~GD~Il~vn 32 (96)
+|.|....... +..+++||.|.-+.
T Consensus 6 al~dy~~~~~~----eLs~~~Gd~i~v~~ 30 (58)
T 1uti_A 6 ALYDFEALEED----ELGFRSGEVVEVLD 30 (58)
T ss_dssp ESSCBCCCSTT----BCCBCTTCEEEEEE
T ss_pred ECccCCCCCcC----CCCCCCCCEEEEEE
Confidence 45566665555 67789999988764
No 208
>2fpe_A C-JUN-amino-terminal kinase interacting protein 1; SRC-homology 3 (SH3) domain, all beta structure, signaling protein; HET: P6G; 1.75A {Rattus norvegicus} PDB: 2fpd_A*
Probab=37.80 E-value=26 Score=18.33 Aligned_cols=24 Identities=17% Similarity=-0.024 Sum_probs=16.0
Q ss_pred CCCCCCCCCccccccccCCCCCCEEEEE
Q psy12583 4 PLVDSEGYPRQDVDVYQGLVKDDIILEF 31 (96)
Q Consensus 4 ~~~~~~~~pa~~~~~~aGLk~GD~Il~v 31 (96)
+|.+....... +..|++||.|.-+
T Consensus 8 al~~y~~~~~~----eLs~~~Gd~i~v~ 31 (62)
T 2fpe_A 8 AIFRFVPRHED----ELELEVDDPLLVE 31 (62)
T ss_dssp ECSCBCCSSTT----BCCBCTTCEEEEE
T ss_pred ECccCCccCcC----cCcCCCCCEEEEE
Confidence 45555555455 5678999988765
No 209
>1cka_A C-CRK N-terminal SH3 domain; complex (oncogene protein/peptide); 1.50A {Mus musculus} SCOP: b.34.2.1 PDB: 1ckb_A 1m3c_A 1m30_A 1m3b_A 1m3a_A
Probab=37.37 E-value=28 Score=17.84 Aligned_cols=25 Identities=24% Similarity=0.201 Sum_probs=17.2
Q ss_pred CCCCCCCCCccccccccCCCCCCEEEEEC
Q psy12583 4 PLVDSEGYPRQDVDVYQGLVKDDIILEFG 32 (96)
Q Consensus 4 ~~~~~~~~pa~~~~~~aGLk~GD~Il~vn 32 (96)
+|.|....... +..+++||.|.-+.
T Consensus 6 al~dy~~~~~~----eLs~~~Gd~i~v~~ 30 (57)
T 1cka_A 6 ALFDFNGNDEE----DLPFKKGDILRIRD 30 (57)
T ss_dssp ESSCBCCSSTT----BCCBCTTCEEEEEE
T ss_pred ECCcCCCCCCC----CCCCCCCCEEEEEE
Confidence 45566655555 57789999888764
No 210
>3dor_A Protein CT_858, CPAF; mature CPAF, dimer, transferase; 2.20A {Chlamydia trachomatis} PDB: 3dpm_A* 3dpn_A 3dja_A
Probab=37.33 E-value=20 Score=28.44 Aligned_cols=18 Identities=17% Similarity=0.095 Sum_probs=15.2
Q ss_pred ccCCCCCCEEEEECCeec
Q psy12583 19 YQGLVKDDIILEFGPINS 36 (96)
Q Consensus 19 ~aGLk~GD~Il~vng~~~ 36 (96)
.+++..||+|++|||++.
T Consensus 107 ~s~I~vGdEIlsING~pv 124 (583)
T 3dor_A 107 SSEIRVGDELLEVDGAPV 124 (583)
T ss_dssp CCSSCTTCEEEEETTEEH
T ss_pred ccCCCCCCEEEEECCccH
Confidence 347999999999999764
No 211
>2x3w_D Syndapin I, protein kinase C and casein kinase substrate in N protein 1; endocytosis, N-WAsp, dynamin, pacsin I, transferase; 2.64A {Mus musculus} PDB: 2x3x_D
Probab=37.28 E-value=28 Score=18.00 Aligned_cols=25 Identities=20% Similarity=0.333 Sum_probs=17.5
Q ss_pred CCCCCCCCCccccccccCCCCCCEEEEEC
Q psy12583 4 PLVDSEGYPRQDVDVYQGLVKDDIILEFG 32 (96)
Q Consensus 4 ~~~~~~~~pa~~~~~~aGLk~GD~Il~vn 32 (96)
+|.|....... +..+++||.|.-+.
T Consensus 8 al~dy~~~~~~----eLs~~~Gd~i~v~~ 32 (60)
T 2x3w_D 8 ALYDYDGQEQD----ELSFKAGDELTKLG 32 (60)
T ss_dssp ECSCBCCSSSS----BCCBCTTCEEEECS
T ss_pred ECcccCccCCC----cccCCCCCEEEEEE
Confidence 45566665555 67789999988765
No 212
>1k4u_S Phagocyte NADPH oxidase subunit P67PHOX; SH3-peptide complex, helix-turn-helix, hormone/growth factor complex; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=37.05 E-value=35 Score=17.80 Aligned_cols=25 Identities=24% Similarity=0.263 Sum_probs=16.9
Q ss_pred CCCCCCCCCccccccccCCCCCCEEEEEC
Q psy12583 4 PLVDSEGYPRQDVDVYQGLVKDDIILEFG 32 (96)
Q Consensus 4 ~~~~~~~~pa~~~~~~aGLk~GD~Il~vn 32 (96)
+|.|....... +..+++||.|.-+.
T Consensus 10 al~dy~~~~~~----eLs~~~Gd~i~v~~ 34 (62)
T 1k4u_S 10 ALFSYEATQPE----DLEFQEGDIILVLS 34 (62)
T ss_dssp CCSCBCCCSSS----BCCBCSSCEEEEEE
T ss_pred ECCCCCcCCCC----CccCCCCCEEEEEE
Confidence 45566555455 56788999888764
No 213
>1y0m_A 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma 1; SH3 domain, hydrolase; 1.20A {Rattus norvegicus} PDB: 1ywp_A 1ywo_A
Probab=36.95 E-value=29 Score=18.09 Aligned_cols=25 Identities=20% Similarity=0.191 Sum_probs=17.6
Q ss_pred CCCCCCCCCccccccccCCCCCCEEEEEC
Q psy12583 4 PLVDSEGYPRQDVDVYQGLVKDDIILEFG 32 (96)
Q Consensus 4 ~~~~~~~~pa~~~~~~aGLk~GD~Il~vn 32 (96)
+|.|....... +.-+++||.|.-+.
T Consensus 8 al~dy~~~~~~----eLs~~~Gd~i~v~~ 32 (61)
T 1y0m_A 8 ALFDYKAQRED----ELTFTKSAIIQNVE 32 (61)
T ss_dssp ESSCBCCCSTT----BCCBCTTCEEEEEE
T ss_pred ECcCCCcCCCC----CcCCcCCCEEEEEE
Confidence 45566655555 57789999998765
No 214
>1g2b_A Spectrin alpha chain; capping protein, calcium-binding, duplication, repeat, SH3 domain, cytoskeleton, metal binding protein; 1.12A {Gallus gallus} SCOP: b.34.2.1 PDB: 1tud_A
Probab=36.16 E-value=29 Score=18.24 Aligned_cols=25 Identities=20% Similarity=0.198 Sum_probs=17.2
Q ss_pred CCCCCCCCCccccccccCCCCCCEEEEEC
Q psy12583 4 PLVDSEGYPRQDVDVYQGLVKDDIILEFG 32 (96)
Q Consensus 4 ~~~~~~~~pa~~~~~~aGLk~GD~Il~vn 32 (96)
+|.|....... +..+++||.|.-+.
T Consensus 26 alydy~a~~~~----eLsf~~Gd~i~v~~ 50 (62)
T 1g2b_A 26 ALYDYQEKSPR----EVTMKKGDILTLLN 50 (62)
T ss_dssp ECSCBCCSSTT----BCCBCTTCEEEEEE
T ss_pred EeeeECCCCCC----ccCCCCCCEEEEEE
Confidence 45566555555 56789999988764
No 215
>2oaw_A Spectrin alpha chain, brain; SH3 domain, chimera, structural protein; 1.90A {Gallus gallus} PDB: 2rot_A 2rmo_A 2kr3_A
Probab=36.04 E-value=29 Score=18.16 Aligned_cols=25 Identities=20% Similarity=0.198 Sum_probs=17.5
Q ss_pred CCCCCCCCCccccccccCCCCCCEEEEEC
Q psy12583 4 PLVDSEGYPRQDVDVYQGLVKDDIILEFG 32 (96)
Q Consensus 4 ~~~~~~~~pa~~~~~~aGLk~GD~Il~vn 32 (96)
+|.+....... +..+++||.|.-+.
T Consensus 6 alydy~~~~~~----eLs~~~Gd~i~v~~ 30 (65)
T 2oaw_A 6 ALYDYQEKSPR----EVTMKKGDILTLLN 30 (65)
T ss_dssp ECSCBCCSSTT----BCCBCTTCEEEEEE
T ss_pred EcccCCccCCC----CCCCCCCCEEEEEE
Confidence 45566655555 67789999988765
No 216
>2bz8_A SH3-domain kinase binding protein 1; SH3 domain, CIN85 adaptor protein, CBL ubiquitin ligase; 2.0A {Homo sapiens}
Probab=36.03 E-value=31 Score=17.77 Aligned_cols=25 Identities=12% Similarity=0.048 Sum_probs=17.1
Q ss_pred CCCCCCCCCccccccccCCCCCCEEEEEC
Q psy12583 4 PLVDSEGYPRQDVDVYQGLVKDDIILEFG 32 (96)
Q Consensus 4 ~~~~~~~~pa~~~~~~aGLk~GD~Il~vn 32 (96)
+|.|....... +..+++||.|.-+.
T Consensus 6 al~dy~~~~~~----eLs~~~Gd~i~v~~ 30 (58)
T 2bz8_A 6 VEFDYQAQHDD----ELTISVGEIITNIR 30 (58)
T ss_dssp ESSCBCCCSTT----BCCBCTTCEEEEEE
T ss_pred ECcccCCCCcC----EeeECCCCEEEEEE
Confidence 35555555455 56799999988764
No 217
>1zuy_A Myosin-5 isoform; SH3 domain, contractIle protein; 1.39A {Saccharomyces cerevisiae} PDB: 1yp5_A
Probab=35.92 E-value=30 Score=17.69 Aligned_cols=25 Identities=20% Similarity=0.013 Sum_probs=16.2
Q ss_pred CCCCC-CCCCccccccccCCCCCCEEEEEC
Q psy12583 4 PLVDS-EGYPRQDVDVYQGLVKDDIILEFG 32 (96)
Q Consensus 4 ~~~~~-~~~pa~~~~~~aGLk~GD~Il~vn 32 (96)
+|.|. +..... +.-+++||.|.-+.
T Consensus 5 al~d~~~~~~~~----eLs~~~Gd~i~v~~ 30 (58)
T 1zuy_A 5 AAYDFPGSGSPS----ELPLKKGDVIYITR 30 (58)
T ss_dssp ESSCBCCCSCTT----BCCBCTTCEEEEEE
T ss_pred EecccCCCCCCC----cCCCCCCCEEEEEE
Confidence 45555 444444 56789999888664
No 218
>2ydl_A SH3 domain-containing kinase-binding protein 1; signaling protein; 2.05A {Homo sapiens} PDB: 2k6d_A
Probab=35.08 E-value=31 Score=18.78 Aligned_cols=25 Identities=12% Similarity=0.092 Sum_probs=18.4
Q ss_pred CCCCCCCCCccccccccCCCCCCEEEEEC
Q psy12583 4 PLVDSEGYPRQDVDVYQGLVKDDIILEFG 32 (96)
Q Consensus 4 ~~~~~~~~pa~~~~~~aGLk~GD~Il~vn 32 (96)
+|.|....... +..+++||.|.-+.
T Consensus 7 Alydy~a~~~~----eLs~~~Gd~i~vl~ 31 (69)
T 2ydl_A 7 VIFPYEAQNDD----ELTIKEGDIVTLIN 31 (69)
T ss_dssp ESSCBCCCSTT----BCCBCTTCEEEEEE
T ss_pred EcccCCCCCCC----ccccCCCCEEEEEE
Confidence 46666665556 67899999998764
No 219
>1oot_A Hypothetical 40.4 kDa protein in PES4-His2 intergenic region; SH3 domain, sturctural genomics, structural genomics; 1.39A {Saccharomyces cerevisiae} SCOP: b.34.2.1 PDB: 1ssh_A 2a08_A
Probab=34.89 E-value=33 Score=17.75 Aligned_cols=25 Identities=20% Similarity=0.123 Sum_probs=17.4
Q ss_pred CCCCCCCCCccccccccCCCCCCEEEEEC
Q psy12583 4 PLVDSEGYPRQDVDVYQGLVKDDIILEFG 32 (96)
Q Consensus 4 ~~~~~~~~pa~~~~~~aGLk~GD~Il~vn 32 (96)
+|.|....... +..+++||.|.-+.
T Consensus 8 al~dy~~~~~~----eLs~~~Gd~i~v~~ 32 (60)
T 1oot_A 8 ALYSFAGEESG----DLPFRKGDVITILK 32 (60)
T ss_dssp ESSCBCCCSTT----BCCBCTTCEEEEEE
T ss_pred ECccCCcCCcC----EeeEcCCCEEEEEE
Confidence 45566655555 56789999988765
No 220
>2jte_A CD2-associated protein; SH3 domain, coiled coil, cytoplasm, phosphorylation, SH3-binding, signaling protein; NMR {Mus musculus} PDB: 2kro_A
Probab=34.77 E-value=32 Score=18.04 Aligned_cols=25 Identities=16% Similarity=0.134 Sum_probs=17.2
Q ss_pred CCCCCCCCCccccccccCCCCCCEEEEEC
Q psy12583 4 PLVDSEGYPRQDVDVYQGLVKDDIILEFG 32 (96)
Q Consensus 4 ~~~~~~~~pa~~~~~~aGLk~GD~Il~vn 32 (96)
+|.|....... +..+++||.|.-+.
T Consensus 11 al~dy~~~~~~----eLs~~~Gd~i~v~~ 35 (64)
T 2jte_A 11 TLFPYTGTNED----ELTFREGEIIHLIS 35 (64)
T ss_dssp ESSCBCCSSSS----BCCBCTTCEEEEEE
T ss_pred ECccCCccCCC----ccCCCCCCEEEEEE
Confidence 45566555555 57789999988764
No 221
>1zx6_A YPR154WP; SH3 domain, protein binding; 1.60A {Saccharomyces cerevisiae} PDB: 1ynz_A
Probab=34.60 E-value=33 Score=17.63 Aligned_cols=25 Identities=16% Similarity=0.078 Sum_probs=16.7
Q ss_pred CCCCCCCCCccccccccCCCCCCEEEEEC
Q psy12583 4 PLVDSEGYPRQDVDVYQGLVKDDIILEFG 32 (96)
Q Consensus 4 ~~~~~~~~pa~~~~~~aGLk~GD~Il~vn 32 (96)
+|.|....... +..+++||.|.-+.
T Consensus 7 al~dy~~~~~~----eLs~~~Gd~i~v~~ 31 (58)
T 1zx6_A 7 ALYQFDPQQDG----DLGLKPGDKVQLLE 31 (58)
T ss_dssp ECSCBCCCSTT----BCCBCTTCEEEEEE
T ss_pred ECceECCCCCC----CccCCCCCEEEEEE
Confidence 45555555455 56788999888654
No 222
>1sem_A SEM-5; SRC-homology 3 (SH3) domain, peptide-binding protein; 2.00A {Caenorhabditis elegans} SCOP: b.34.2.1 PDB: 2sem_A 3sem_A 1k76_A 1kfz_A
Probab=34.56 E-value=33 Score=17.57 Aligned_cols=25 Identities=16% Similarity=0.143 Sum_probs=17.0
Q ss_pred CCCCCCCCCccccccccCCCCCCEEEEEC
Q psy12583 4 PLVDSEGYPRQDVDVYQGLVKDDIILEFG 32 (96)
Q Consensus 4 ~~~~~~~~pa~~~~~~aGLk~GD~Il~vn 32 (96)
+|.+....... +.-+++||.|.-+.
T Consensus 7 al~dy~~~~~~----eLs~~~Gd~i~v~~ 31 (58)
T 1sem_A 7 ALFDFNPQESG----ELAFKRGDVITLIN 31 (58)
T ss_dssp ESSCBCCSSTT----BCCBCTTCEEEEEE
T ss_pred ECcCCCCCCCC----CcCCCCCCEEEEEE
Confidence 45556555455 56789999988764
No 223
>2j3t_D Trafficking protein particle complex subunit 4; trapp, palmitate, transport, lipoprotein, ER-golgi transport apparatus, protein transport; HET: PLM; 2.4A {Homo sapiens} PDB: 2zmv_A 2jsn_A
Probab=33.76 E-value=38 Score=23.45 Aligned_cols=46 Identities=11% Similarity=0.156 Sum_probs=32.9
Q ss_pred ccCCCCCCEEEEECCeecCC--cccHHHHHHHHHhCCCceEEEEEEeC
Q psy12583 19 YQGLVKDDIILEFGPINSSN--FKSLQDIASTVRAGVNTDIPITVLRN 64 (96)
Q Consensus 19 ~aGLk~GD~Il~vng~~~~~--~~~~~di~~~i~~~~g~~i~l~V~R~ 64 (96)
+.|++.|-..+++||.++.. +.+=.++.++|....+.|+-+...+.
T Consensus 54 ~d~~~~~~~~~~~ng~~~~~~~~~d~~~v~~~iigk~N~PLyir~f~~ 101 (219)
T 2j3t_D 54 RDGIRVGHAVLAINGMDVNGRYTADGKEVLEYLGNPANYPVSIRFGRP 101 (219)
T ss_dssp CTTCCTTCEEEEETTEECBTTBCTTSSBHHHHTTCGGGCSEEEEEECC
T ss_pred cCCccccceeeecCCccCCCcccccCceeeeeeecCCCCceEEEecCC
Confidence 56999999999999987542 22223566777777777887776553
No 224
>1tg0_A BBC1 protein, myosin tail region-interacting protein MTI1; yeast, SH3 domain, structural genomics, contractIle protein; 0.97A {Saccharomyces cerevisiae} PDB: 1zuk_A 1wdx_A
Probab=33.63 E-value=33 Score=18.33 Aligned_cols=24 Identities=13% Similarity=-0.022 Sum_probs=15.4
Q ss_pred CCCCCCCCccccccccCCCCCCEEEEEC
Q psy12583 5 LVDSEGYPRQDVDVYQGLVKDDIILEFG 32 (96)
Q Consensus 5 ~~~~~~~pa~~~~~~aGLk~GD~Il~vn 32 (96)
|.|....... +..+++||.|.-+.
T Consensus 13 lydy~~~~~~----eLsf~~Gd~i~v~~ 36 (68)
T 1tg0_A 13 QFPYKSDYED----DLNFEKDQEIIVTS 36 (68)
T ss_dssp SSCBCCSCTT----BCCBCTTCEEEEEE
T ss_pred CeeECcCCcC----CCCCCCCCEEEEEE
Confidence 4555554445 56788899887553
No 225
>1uj0_A Signal transducing adaptor molecule (SH3 domain and ITAM motif) 2; STAM, SH3, GRB2, GADS, PXXP, HRS, endocytosis, early endosome, signaling protein/signaling protein complex; 1.70A {Mus musculus} SCOP: b.34.2.1
Probab=33.25 E-value=36 Score=17.81 Aligned_cols=25 Identities=16% Similarity=0.162 Sum_probs=16.9
Q ss_pred CCCCCCCCCccccccccCCCCCCEEEEEC
Q psy12583 4 PLVDSEGYPRQDVDVYQGLVKDDIILEFG 32 (96)
Q Consensus 4 ~~~~~~~~pa~~~~~~aGLk~GD~Il~vn 32 (96)
+|.|....... +..+++||.|.-+.
T Consensus 10 al~dy~~~~~~----eLs~~~Gd~i~v~~ 34 (62)
T 1uj0_A 10 ALYDFEAVEDN----ELTFKHGELITVLD 34 (62)
T ss_dssp ESSCBCCCSTT----BCCBCTTCEEEEEE
T ss_pred ECccCCCCCcC----CcCCCCCCEEEEEE
Confidence 45555555455 56788999888764
No 226
>2iim_A Proto-oncogene tyrosine-protein kinase LCK; beta-barrels, signaling protein; HET: PG4; 1.00A {Homo sapiens} SCOP: b.34.2.1 PDB: 1h92_A 1kik_A
Probab=33.18 E-value=36 Score=17.75 Aligned_cols=25 Identities=16% Similarity=0.057 Sum_probs=16.3
Q ss_pred CCCCCCCCCccccccccCCCCCCEEEEEC
Q psy12583 4 PLVDSEGYPRQDVDVYQGLVKDDIILEFG 32 (96)
Q Consensus 4 ~~~~~~~~pa~~~~~~aGLk~GD~Il~vn 32 (96)
+|.|....... +..+++||.|.-+.
T Consensus 11 al~dy~~~~~~----eLs~~~Gd~i~v~~ 35 (62)
T 2iim_A 11 ALHSYEPSHDG----DLGFEKGEQLRILE 35 (62)
T ss_dssp ESSCBCCCSTT----BCCBCTTCEEEEEE
T ss_pred EcccCCCCCCC----CcCCCCCCEEEEEE
Confidence 34555554445 56688899888764
No 227
>2lx7_A GAS-7, growth arrest-specific protein 7; structural genomics, northeast structural genomics consortiu target HR8574A, PSI-biology; NMR {Homo sapiens}
Probab=33.05 E-value=36 Score=18.32 Aligned_cols=26 Identities=12% Similarity=0.033 Sum_probs=16.3
Q ss_pred CCCCCCCCCccccccccCCCCCCEEEEEC
Q psy12583 4 PLVDSEGYPRQDVDVYQGLVKDDIILEFG 32 (96)
Q Consensus 4 ~~~~~~~~pa~~~~~~aGLk~GD~Il~vn 32 (96)
+|-|....... =...+++||.|.=+.
T Consensus 8 Alydy~~~~~~---e~Ls~~~Gd~i~v~~ 33 (60)
T 2lx7_A 8 TLYPFSGERHG---QGLRFAAGELITLLQ 33 (60)
T ss_dssp ESCCCCSCCCS---SCCCCCTTCEEEBSC
T ss_pred ECcccCCCCCC---CCccCCCCCEEEEeE
Confidence 45666654333 036899999887554
No 228
>1w1f_A Tyrosine-protein kinase LYN; SH3-domain, SH3 domain, tyrosine kinase, signal transduction; NMR {Homo sapiens} PDB: 1wa7_A
Probab=33.02 E-value=35 Score=17.88 Aligned_cols=25 Identities=12% Similarity=0.109 Sum_probs=16.5
Q ss_pred CCCCCCCCCccccccccCCCCCCEEEEEC
Q psy12583 4 PLVDSEGYPRQDVDVYQGLVKDDIILEFG 32 (96)
Q Consensus 4 ~~~~~~~~pa~~~~~~aGLk~GD~Il~vn 32 (96)
+|.|....... +..+++||.|.-+.
T Consensus 12 al~dy~~~~~~----eLs~~~Gd~i~v~~ 36 (65)
T 1w1f_A 12 ALYPYDGIHPD----DLSFKKGEKMKVLE 36 (65)
T ss_dssp ESSCBCCCSSS----CCCBCTTCEEEEEE
T ss_pred EceeECCcCCC----cCCCCCCCEEEEEE
Confidence 45555555455 56788899887664
No 229
>2g6f_X RHO guanine nucleotide exchange factor 7; SH3 domain, peptide interaction, signaling protein; HET: NCO; 0.92A {Rattus norvegicus} PDB: 2df6_A* 2p4r_A 2esw_A
Probab=32.97 E-value=36 Score=17.56 Aligned_cols=25 Identities=12% Similarity=0.031 Sum_probs=15.7
Q ss_pred CCCCCCCCCccccccccCCCCCCEEEEEC
Q psy12583 4 PLVDSEGYPRQDVDVYQGLVKDDIILEFG 32 (96)
Q Consensus 4 ~~~~~~~~pa~~~~~~aGLk~GD~Il~vn 32 (96)
+|.|.+..... +.-+++||.|.-+.
T Consensus 9 al~dy~~~~~~----eLs~~~Gd~i~v~~ 33 (59)
T 2g6f_X 9 AKFNFQQTNED----ELSFSKGDVIHVTR 33 (59)
T ss_dssp ESSCBCCSSTT----BCCBCTTCEEEEEE
T ss_pred ECceeCCCCcC----CcCCCCCCEEEEEE
Confidence 34555554445 56688899887553
No 230
>2dl4_A Protein STAC; SH3 domain, STAC protein, SRC homology 3, cysteine-rich domain protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=32.94 E-value=37 Score=18.15 Aligned_cols=25 Identities=16% Similarity=0.030 Sum_probs=17.3
Q ss_pred CCCCCCCCCccccccccCCCCCCEEEEEC
Q psy12583 4 PLVDSEGYPRQDVDVYQGLVKDDIILEFG 32 (96)
Q Consensus 4 ~~~~~~~~pa~~~~~~aGLk~GD~Il~vn 32 (96)
+|.|.+..... +.-+++||.|.-+.
T Consensus 12 al~dy~~~~~~----eLs~~~Gd~i~v~~ 36 (68)
T 2dl4_A 12 ALYKFVPQENE----DLEMRPGDIITLLE 36 (68)
T ss_dssp ESSCCCCSSTT----BCCCCTTCEEEEEE
T ss_pred EeeeECCCCcC----CcCCCCCCEEEEEE
Confidence 45566555555 67789999988765
No 231
>1zlm_A Osteoclast stimulating factor 1; beta barrel, signaling protein; 1.07A {Homo sapiens}
Probab=32.91 E-value=36 Score=17.48 Aligned_cols=25 Identities=20% Similarity=0.025 Sum_probs=17.0
Q ss_pred CCCCCCCCCccccccccCCCCCCEEEEEC
Q psy12583 4 PLVDSEGYPRQDVDVYQGLVKDDIILEFG 32 (96)
Q Consensus 4 ~~~~~~~~pa~~~~~~aGLk~GD~Il~vn 32 (96)
+|.+....... +.-+++||.|.-+.
T Consensus 8 al~dy~~~~~~----eLs~~~Gd~i~v~~ 32 (58)
T 1zlm_A 8 ALYTFEPRTPD----ELYFEEGDIIYITD 32 (58)
T ss_dssp ESSCBCCSSTT----BCCBCTTCEEEEEE
T ss_pred ECccCCCCCCC----CccCCCCCEEEEEE
Confidence 45555555555 56788999988764
No 232
>2gnc_A SLIT-ROBO RHO GTPase-activating protein 1; beta barrel, signaling protein; 1.80A {Mus musculus}
Probab=32.88 E-value=36 Score=17.67 Aligned_cols=25 Identities=16% Similarity=0.143 Sum_probs=15.8
Q ss_pred CCCCCCCCCccccccccCCCCCCEEEEEC
Q psy12583 4 PLVDSEGYPRQDVDVYQGLVKDDIILEFG 32 (96)
Q Consensus 4 ~~~~~~~~pa~~~~~~aGLk~GD~Il~vn 32 (96)
+|.|....... +..+++||.|.-+.
T Consensus 11 al~dy~~~~~~----eLs~~~Gd~i~v~~ 35 (60)
T 2gnc_A 11 AKFDYVGRSAR----ELSFKKGASLLLYH 35 (60)
T ss_dssp ESSCBCCSSTT----BCCBCTTCEEEEEE
T ss_pred ECCCCCcCCcC----CcCCCCCCEEEEEE
Confidence 34555554444 56788899887654
No 233
>4e6r_A Cytoplasmic protein NCK2; SH3 domain, protein binding, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; HET: MLY; 2.20A {Homo sapiens} PDB: 2frw_A 2js0_A
Probab=32.54 E-value=48 Score=16.76 Aligned_cols=25 Identities=8% Similarity=-0.081 Sum_probs=17.1
Q ss_pred CCCCCCCCCccccccccCCCCCCEEEEEC
Q psy12583 4 PLVDSEGYPRQDVDVYQGLVKDDIILEFG 32 (96)
Q Consensus 4 ~~~~~~~~pa~~~~~~aGLk~GD~Il~vn 32 (96)
+|.|....... +..+++||.|.-+.
T Consensus 6 al~dy~~~~~~----eLs~~~Gd~i~v~~ 30 (58)
T 4e6r_A 6 VXFAYVAERED----ELSLVXGSRVTVME 30 (58)
T ss_dssp ECSCBCCCSTT----BCCBCTTCEEEEEE
T ss_pred ECccCCCCCCC----EeeEeCCCEEEEeE
Confidence 45565555555 57799999988664
No 234
>1wyx_A CRK-associated substrate; beta sheets, cell adhesion; 1.14A {Homo sapiens}
Probab=32.49 E-value=35 Score=18.20 Aligned_cols=25 Identities=20% Similarity=0.185 Sum_probs=18.1
Q ss_pred CCCCCCCCCccccccccCCCCCCEEEEEC
Q psy12583 4 PLVDSEGYPRQDVDVYQGLVKDDIILEFG 32 (96)
Q Consensus 4 ~~~~~~~~pa~~~~~~aGLk~GD~Il~vn 32 (96)
+|.|....... +..+++||.|.-+.
T Consensus 8 alydy~~~~~~----eLs~~~Gd~i~v~~ 32 (69)
T 1wyx_A 8 ALYDNVAESPD----ELSFRKGDIMTVLE 32 (69)
T ss_dssp ESSCBCCSSTT----BCCBCTTCEEEEEE
T ss_pred ECccCCcCCCC----ccCCcCCCEEEEeE
Confidence 45666665555 67799999998765
No 235
>1wxb_A Epidermal growth factor receptor pathway substrate 8-like protein; SH3, EPS8, EPS8L2, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=32.39 E-value=44 Score=17.81 Aligned_cols=25 Identities=16% Similarity=0.171 Sum_probs=17.7
Q ss_pred CCCCCCCCCccccccccCCCCCCEEEEEC
Q psy12583 4 PLVDSEGYPRQDVDVYQGLVKDDIILEFG 32 (96)
Q Consensus 4 ~~~~~~~~pa~~~~~~aGLk~GD~Il~vn 32 (96)
+|.|....... +..|++||.|.-+.
T Consensus 12 alydy~~~~~~----eLs~~~Gd~i~v~~ 36 (68)
T 1wxb_A 12 ILYDFTARNAN----ELSVLKDEVLEVLE 36 (68)
T ss_dssp CSSCBCCSSSS----BCCBCTTCEEEEEE
T ss_pred ECccCCCCCCC----ccCCCCCCEEEEEE
Confidence 56666665555 56789999988764
No 236
>2v1q_A SLA1, cytoskeleton assembly control protein SLA1; structural genomics, phosphorylation, structural protein, yeast, SH3 domain; 1.2A {Saccharomyces cerevisiae} PDB: 1z9z_A
Probab=32.35 E-value=38 Score=17.39 Aligned_cols=25 Identities=8% Similarity=-0.037 Sum_probs=16.6
Q ss_pred CCCCCCCCCccccccccCCCCCCEEEEEC
Q psy12583 4 PLVDSEGYPRQDVDVYQGLVKDDIILEFG 32 (96)
Q Consensus 4 ~~~~~~~~pa~~~~~~aGLk~GD~Il~vn 32 (96)
+|.|....... +..+++||.|.-+.
T Consensus 7 al~dy~~~~~~----eLs~~~Gd~i~v~~ 31 (60)
T 2v1q_A 7 VQYDFMAESQD----ELTIKSGDKVYILD 31 (60)
T ss_dssp ECSCBCCCSTT----BCCBCTTCEEEEEE
T ss_pred EeeeECCCCCC----CccCCCCCEEEEEe
Confidence 35555554445 56789999988764
No 237
>1i07_A Epidermal growth factor receptor kinase substrate EPS8; hormone/growth factor; 1.80A {Mus musculus} SCOP: b.34.2.1 PDB: 1aoj_A 1i0c_A
Probab=32.34 E-value=37 Score=17.56 Aligned_cols=25 Identities=16% Similarity=0.130 Sum_probs=17.7
Q ss_pred CCCCCCCCCccccccccCCCCCCEEEEEC
Q psy12583 4 PLVDSEGYPRQDVDVYQGLVKDDIILEFG 32 (96)
Q Consensus 4 ~~~~~~~~pa~~~~~~aGLk~GD~Il~vn 32 (96)
+|.|....... +..+++||.|.-+.
T Consensus 6 al~dy~~~~~~----eLs~~~Gd~i~v~~ 30 (60)
T 1i07_A 6 SKYDFVARNSS----ELSVMKDDVLEILD 30 (60)
T ss_dssp ESSCBCCSSTT----BCCBCTTCEEEECG
T ss_pred ECccCCCCCCC----cccCCCCCEEEEEE
Confidence 45666665555 57789999988764
No 238
>2nwm_A Vinexin; cell adhesion; NMR {Homo sapiens}
Probab=32.27 E-value=37 Score=18.18 Aligned_cols=25 Identities=20% Similarity=0.101 Sum_probs=17.4
Q ss_pred CCCCCCCCCccccccccCCCCCCEEEEEC
Q psy12583 4 PLVDSEGYPRQDVDVYQGLVKDDIILEFG 32 (96)
Q Consensus 4 ~~~~~~~~pa~~~~~~aGLk~GD~Il~vn 32 (96)
+|.|....... +..|++||.|.-+.
T Consensus 6 alydy~~~~~~----eLs~~~Gd~i~v~~ 30 (65)
T 2nwm_A 6 LKFDFQAQSPK----ELTLQKGDIVYIHK 30 (65)
T ss_dssp ECSCBCCCSTT----BCCBCTTCEEEEEE
T ss_pred EeeeECCCCcC----ccCCcCCCEEEEEE
Confidence 45566655555 56799999998764
No 239
>1csk_A C-SRC SH3 domain; phosphotransferase; 2.50A {Homo sapiens} SCOP: b.34.2.1
Probab=31.96 E-value=36 Score=18.26 Aligned_cols=25 Identities=16% Similarity=0.155 Sum_probs=16.0
Q ss_pred CCCCCCCCCccccccccCCCCCCEEEEEC
Q psy12583 4 PLVDSEGYPRQDVDVYQGLVKDDIILEFG 32 (96)
Q Consensus 4 ~~~~~~~~pa~~~~~~aGLk~GD~Il~vn 32 (96)
+|.|....... +..+++||.|.-+.
T Consensus 16 alydy~~~~~~----eLs~~~Gd~i~v~~ 40 (71)
T 1csk_A 16 AKYNFHGTAEQ----DLPFCKGDVLTIVA 40 (71)
T ss_dssp ESSCBCCSSTT----BCCBCTTCEEEEEE
T ss_pred EceeECcCCCC----cCCCCCCCEEEEeE
Confidence 35555555445 56688888887664
No 240
>2vwf_A Growth factor receptor-bound protein 2; polymorphism, phosphoprotein, golgi apparatus, alternative splicing, HOST-virus interaction, SH3C, signaling; 1.58A {Homo sapiens} PDB: 2w0z_A 1gcq_A 1gfc_A 1gfd_A 1io6_A 2vvk_A
Probab=31.92 E-value=39 Score=17.22 Aligned_cols=25 Identities=20% Similarity=0.223 Sum_probs=16.9
Q ss_pred CCCCCCCCCccccccccCCCCCCEEEEEC
Q psy12583 4 PLVDSEGYPRQDVDVYQGLVKDDIILEFG 32 (96)
Q Consensus 4 ~~~~~~~~pa~~~~~~aGLk~GD~Il~vn 32 (96)
+|.+....... +..+++||.|.-+.
T Consensus 7 al~dy~~~~~~----eLs~~~Gd~i~v~~ 31 (58)
T 2vwf_A 7 ALFDFDPQEDG----ELGFRRGDFIHVMD 31 (58)
T ss_dssp ESSCBCCCSTT----BCCBCTTCEEEEEE
T ss_pred ECceECCCCcC----CcCCCCCCEEEEEE
Confidence 45555555555 56789999988764
No 241
>3u23_A CD2-associated protein; structural genomics, structural genomics consortium, SGC, BE barrel, adaptor protein, protein binding; 1.11A {Homo sapiens} PDB: 2krn_A
Probab=31.76 E-value=37 Score=17.64 Aligned_cols=25 Identities=20% Similarity=-0.061 Sum_probs=16.2
Q ss_pred CCCCCCCCCccccccccCCCCCCEEEEEC
Q psy12583 4 PLVDSEGYPRQDVDVYQGLVKDDIILEFG 32 (96)
Q Consensus 4 ~~~~~~~~pa~~~~~~aGLk~GD~Il~vn 32 (96)
+|.|....... +..+++||.|.-+.
T Consensus 12 al~dy~~~~~~----eLs~~~Gd~i~v~~ 36 (65)
T 3u23_A 12 VLFEYIPQNED----ELELKVGDIIDINE 36 (65)
T ss_dssp ECSCBCCSSTT----BCCBCTTCEEEEEE
T ss_pred EeeeeCCCCcC----CcCCCCCCEEEEEE
Confidence 34555554455 56788999887654
No 242
>2jw4_A Cytoplasmic protein NCK1; SH3 domain, phosphorylation, SH2 domain, signaling protein; NMR {Homo sapiens}
Probab=31.76 E-value=46 Score=18.02 Aligned_cols=25 Identities=12% Similarity=0.068 Sum_probs=17.9
Q ss_pred CCCCCCCCCccccccccCCCCCCEEEEEC
Q psy12583 4 PLVDSEGYPRQDVDVYQGLVKDDIILEFG 32 (96)
Q Consensus 4 ~~~~~~~~pa~~~~~~aGLk~GD~Il~vn 32 (96)
+|.|....... +..+++||.|.-+.
T Consensus 12 alydy~~~~~~----eLs~~~Gd~i~v~~ 36 (72)
T 2jw4_A 12 AKFDYVAQQEQ----ELDIKKNERLWLLD 36 (72)
T ss_dssp CSSCCCCSSTT----SCCCCTTCEEEEEE
T ss_pred ECcCCCcCCCC----cccCCCCCEEEEEE
Confidence 45666665555 57799999998775
No 243
>2j6f_A CD2-associated protein; metal-binding, immune response, SH3, SH2 domain, SH3 zinc-finger, SH3- binding, UBL conjugation pathway; 1.7A {Homo sapiens} PDB: 2j6k_A 2j6o_A 2j7i_A 2krm_A
Probab=31.34 E-value=38 Score=17.66 Aligned_cols=25 Identities=12% Similarity=0.015 Sum_probs=16.6
Q ss_pred CCCCCCCCCccccccccCCCCCCEEEEEC
Q psy12583 4 PLVDSEGYPRQDVDVYQGLVKDDIILEFG 32 (96)
Q Consensus 4 ~~~~~~~~pa~~~~~~aGLk~GD~Il~vn 32 (96)
+|.+....... +..+++||.|.-+.
T Consensus 6 al~dy~~~~~~----eLs~~~Gd~i~v~~ 30 (62)
T 2j6f_A 6 VEYDYDAVHDD----ELTIRVGEIIRNVK 30 (62)
T ss_dssp ECSCBCCSSTT----BCCBCTTCEEEEEE
T ss_pred ECccCCcCCcC----CcCCcCCCEEEEEE
Confidence 45555555445 56789999987654
No 244
>1w70_A Neutrophil cytosol factor 4; NADPH oxidase, P40PHOX, P47PHOX, SH3 domain, polyproline; 1.46A {Homo sapiens} PDB: 1w6x_A
Probab=31.32 E-value=39 Score=17.50 Aligned_cols=25 Identities=20% Similarity=0.300 Sum_probs=16.1
Q ss_pred CCCCCCCCCccccccccCCCCCCEEEEEC
Q psy12583 4 PLVDSEGYPRQDVDVYQGLVKDDIILEFG 32 (96)
Q Consensus 4 ~~~~~~~~pa~~~~~~aGLk~GD~Il~vn 32 (96)
+|.|....... +..+++||.|.-+.
T Consensus 9 al~dy~~~~~~----eLs~~~Gd~i~v~~ 33 (60)
T 1w70_A 9 ALFDFTGNSKL----ELNFKAGDVIFLLS 33 (60)
T ss_dssp ESSCBCCSSTT----BCCBCTTCEEEEEE
T ss_pred ECccCCcCCCC----CccCCCCCEEEEEE
Confidence 34555554445 56788899887664
No 245
>2djq_A SH3 domain containing ring finger 2; MUS musculus 0 DAY neonate head cDNA, riken FULL-length enriched library, clone:4831401O22, structural genomics; NMR {Mus musculus}
Probab=31.30 E-value=38 Score=17.99 Aligned_cols=25 Identities=24% Similarity=0.177 Sum_probs=16.2
Q ss_pred CCCCCCCCCccccccccCCCCCCEEEEEC
Q psy12583 4 PLVDSEGYPRQDVDVYQGLVKDDIILEFG 32 (96)
Q Consensus 4 ~~~~~~~~pa~~~~~~aGLk~GD~Il~vn 32 (96)
+|.|....... +..+++||.|.-+.
T Consensus 12 al~dy~~~~~~----eLs~~~Gd~i~v~~ 36 (68)
T 2djq_A 12 ALCNYRGKNPG----DLKFNKGDVILLRR 36 (68)
T ss_dssp ECSCCCSCCTT----CCCCCTTCEEEEEE
T ss_pred ECCCCCCCCcC----CccCCCCCEEEEEE
Confidence 35555554445 56789999887654
No 246
>1aww_A ATK, AMGX1, BPK, bruton'S tyrosine kinase; X-linked agammaglobulinemia, XLA, BTK, SH3 domain, transferase; NMR {Homo sapiens} SCOP: b.34.2.1 PDB: 1awx_A 1qly_A
Probab=31.11 E-value=47 Score=17.54 Aligned_cols=25 Identities=20% Similarity=0.044 Sum_probs=17.3
Q ss_pred CCCCCCCCCccccccccCCCCCCEEEEEC
Q psy12583 4 PLVDSEGYPRQDVDVYQGLVKDDIILEFG 32 (96)
Q Consensus 4 ~~~~~~~~pa~~~~~~aGLk~GD~Il~vn 32 (96)
+|.+....... +.-+++||.|.-+.
T Consensus 13 al~dy~~~~~~----eLs~~~Gd~i~v~~ 37 (67)
T 1aww_A 13 ALYDYMPMNAN----DLQLRKGDEYFILE 37 (67)
T ss_dssp BSSCCCCSSSS----SCCCCSSCEEECCC
T ss_pred ECccCCCCCCC----CccCCCCCEEEEEE
Confidence 45566555555 56789999988765
No 247
>2fpf_A C-JUN-amino-terminal kinase interacting protein 1; scaffold protein 1, islet-brain-1, IB-1, mitogen-activated P kinase 8-interacting protein 1; 3.00A {Rattus norvegicus}
Probab=31.04 E-value=38 Score=18.22 Aligned_cols=24 Identities=17% Similarity=-0.024 Sum_probs=16.1
Q ss_pred CCCCCCCCCccccccccCCCCCCEEEEE
Q psy12583 4 PLVDSEGYPRQDVDVYQGLVKDDIILEF 31 (96)
Q Consensus 4 ~~~~~~~~pa~~~~~~aGLk~GD~Il~v 31 (96)
+|.+....... +..|++||.|.-+
T Consensus 11 al~~y~~~~~~----eLs~~~Gd~i~v~ 34 (71)
T 2fpf_A 11 AIFRFVPRHED----ELELEVDDPLLVE 34 (71)
T ss_dssp ECSCBCCSSTT----BCCBCTTCEEEEE
T ss_pred ECeeECccCCC----cccCcCCcEEEEe
Confidence 35555555455 5678999988765
No 248
>2dmo_A Neutrophil cytosol factor 2; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=31.02 E-value=40 Score=17.99 Aligned_cols=25 Identities=8% Similarity=0.080 Sum_probs=16.9
Q ss_pred CCCCCCCCCccccccccCCCCCCEEEEEC
Q psy12583 4 PLVDSEGYPRQDVDVYQGLVKDDIILEFG 32 (96)
Q Consensus 4 ~~~~~~~~pa~~~~~~aGLk~GD~Il~vn 32 (96)
+|.|....... +..+++||.|.-+.
T Consensus 12 al~dy~~~~~~----eLs~~~Gd~i~v~~ 36 (68)
T 2dmo_A 12 VLFGFVPETKE----ELQVMPGNIVFVLK 36 (68)
T ss_dssp ECSSCCCCSSS----SCCCCTTCEEEECE
T ss_pred ECcCCCcCCcC----CCCCCCCCEEEEEE
Confidence 45566555555 57789999888654
No 249
>2xmf_A Myosin 1E SH3; motor protein, SH3 domain; HET: DIA; 1.50A {Mus musculus}
Probab=30.99 E-value=40 Score=17.41 Aligned_cols=24 Identities=17% Similarity=0.083 Sum_probs=15.1
Q ss_pred CCCCCCCCccccccccCCCCCCEEEEEC
Q psy12583 5 LVDSEGYPRQDVDVYQGLVKDDIILEFG 32 (96)
Q Consensus 5 ~~~~~~~pa~~~~~~aGLk~GD~Il~vn 32 (96)
|.|....... +..+++||.|.-+.
T Consensus 11 l~dy~~~~~~----eLs~~~Gd~i~v~~ 34 (60)
T 2xmf_A 11 LYAYDAQDTD----ELSFNANDIIDIIK 34 (60)
T ss_dssp SSCBCCSSTT----BCCBCTTCEEEEEE
T ss_pred CccCCcCCcC----CcCCCCCCEEEEEE
Confidence 4455544444 56788888887654
No 250
>3eg3_A Proto-oncogene tyrosine-protein kinase ABL1; beta, ATP-binding, cell adhesion, cytoskeleton, LIPO magnesium, manganese, metal-binding, myristate; 1.40A {Homo sapiens} PDB: 3egu_A 3eg0_A 3eg2_A 3eg1_A 1abo_A 1abq_A 1ju5_C* 2o88_A 1bbz_A 1awo_A
Probab=30.58 E-value=55 Score=16.84 Aligned_cols=25 Identities=16% Similarity=0.155 Sum_probs=17.5
Q ss_pred CCCCCCCCCccccccccCCCCCCEEEEEC
Q psy12583 4 PLVDSEGYPRQDVDVYQGLVKDDIILEFG 32 (96)
Q Consensus 4 ~~~~~~~~pa~~~~~~aGLk~GD~Il~vn 32 (96)
+|.|....... +..+++||.|.-+.
T Consensus 10 al~dy~~~~~~----eLs~~~Gd~i~v~~ 34 (63)
T 3eg3_A 10 ALYDFVASGDN----TLSITKGEKLRVLG 34 (63)
T ss_dssp ESSCBCCCSSS----BCCBCTTCEEEEEE
T ss_pred EcceECCCCCC----ccCCCCCCEEEEEE
Confidence 45566655555 67789999988764
No 251
>2ew3_A SH3-containing GRB2-like protein 3; SH3GL3, solution structure, signaling protein; NMR {Homo sapiens}
Probab=30.51 E-value=41 Score=18.15 Aligned_cols=25 Identities=28% Similarity=0.173 Sum_probs=17.2
Q ss_pred CCCCCCCCCccccccccCCCCCCEEEEEC
Q psy12583 4 PLVDSEGYPRQDVDVYQGLVKDDIILEFG 32 (96)
Q Consensus 4 ~~~~~~~~pa~~~~~~aGLk~GD~Il~vn 32 (96)
+|.|....... +..+++||.|.-+.
T Consensus 8 Alydy~~~~~~----eLsf~~Gd~i~v~~ 32 (68)
T 2ew3_A 8 GLYDFEPENQG----ELGFKEGDIITLTN 32 (68)
T ss_dssp ESSCBCCCSTT----BCCBCTTCEEEEEE
T ss_pred EeeeECCCCCC----ccCCCCCCEEEEEE
Confidence 45566555455 57789999988765
No 252
>2ed1_A 130 kDa phosphatidylinositol 4,5-biphosphate- dependent ARF1 GTPase-activating protein...; GTPase activation, membrane, metal-binding, SH3 domain; NMR {Homo sapiens} PDB: 2rqt_A 2rqu_A
Probab=30.47 E-value=42 Score=18.32 Aligned_cols=25 Identities=12% Similarity=0.292 Sum_probs=17.3
Q ss_pred CCCCCCCCCccccccccCCCCCCEEEEEC
Q psy12583 4 PLVDSEGYPRQDVDVYQGLVKDDIILEFG 32 (96)
Q Consensus 4 ~~~~~~~~pa~~~~~~aGLk~GD~Il~vn 32 (96)
+|.|....... +..+++||.|.-+.
T Consensus 15 alydy~~~~~~----eLsf~~Gd~i~v~~ 39 (76)
T 2ed1_A 15 TIYDCQADNDD----ELTFIEGEVIIVTG 39 (76)
T ss_dssp ESSCCCCSSSS----BCCCCSSCEEEESS
T ss_pred ECccCCCCCcC----CcCcCCCCEEEEEE
Confidence 45566655555 57789999988764
No 253
>1gl5_A Tyrosine-protein kinase TEC; transferase, ATP-binding, SH3 domain, phosphorylation; NMR {Mus musculus} SCOP: b.34.2.1
Probab=30.40 E-value=41 Score=17.86 Aligned_cols=25 Identities=8% Similarity=0.037 Sum_probs=17.5
Q ss_pred CCCCCCCCCccccccccCCCCCCEEEEEC
Q psy12583 4 PLVDSEGYPRQDVDVYQGLVKDDIILEFG 32 (96)
Q Consensus 4 ~~~~~~~~pa~~~~~~aGLk~GD~Il~vn 32 (96)
+|.+....... +..+++||.|.-+.
T Consensus 7 al~dy~~~~~~----eLs~~~Gd~i~v~~ 31 (67)
T 1gl5_A 7 AMYDFQATEAH----DLRLERGQEYIILE 31 (67)
T ss_dssp ECSCBCCSSSS----BCCBCTTCEEEEEE
T ss_pred ECccCCCCCCC----eecCCcCCEEEEEE
Confidence 45566655555 57789999998765
No 254
>2o9s_A Ponsin; SH3 domain, signaling protein; 0.83A {Homo sapiens} PDB: 2o31_A 2o9v_A 2o2w_A
Probab=30.40 E-value=40 Score=17.85 Aligned_cols=25 Identities=12% Similarity=0.052 Sum_probs=16.2
Q ss_pred CCCCCCCCCccccccccCCCCCCEEEEEC
Q psy12583 4 PLVDSEGYPRQDVDVYQGLVKDDIILEFG 32 (96)
Q Consensus 4 ~~~~~~~~pa~~~~~~aGLk~GD~Il~vn 32 (96)
+|.|....... +..+++||.|.-+.
T Consensus 11 al~dy~~~~~~----eLs~~~Gd~i~v~~ 35 (67)
T 2o9s_A 11 AKFNFNGDTQV----EMSFRKGERITLLR 35 (67)
T ss_dssp ECSCBCCSSTT----BCCBCTTCEEEEEE
T ss_pred ECccCCcCCcC----ccCCCCCCEEEEEE
Confidence 34555554445 56788899888764
No 255
>1uhf_A Intersectin 2; beta barrel, SH3 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, signaling protein; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=30.39 E-value=50 Score=17.68 Aligned_cols=24 Identities=13% Similarity=-0.006 Sum_probs=15.8
Q ss_pred CCCCCCCCCccccccccCCCCCCEEEEE
Q psy12583 4 PLVDSEGYPRQDVDVYQGLVKDDIILEF 31 (96)
Q Consensus 4 ~~~~~~~~pa~~~~~~aGLk~GD~Il~v 31 (96)
+|.|....... +.-+++||.|.-+
T Consensus 13 al~dy~~~~~~----eLs~~~Gd~i~v~ 36 (69)
T 1uhf_A 13 ALYPYSSVEPG----DLTFTEGEEILVT 36 (69)
T ss_dssp CSSCBCCSSSS----BCCBCTTCEEEEC
T ss_pred EeeeECCCCcC----ccCCCCCCEEEEE
Confidence 45566555455 5678889988754
No 256
>2lcs_A NAP1-binding protein 2; adaptor, transferase, signaling protein; NMR {Saccharomyces cerevisiae}
Probab=30.38 E-value=40 Score=18.50 Aligned_cols=25 Identities=24% Similarity=0.113 Sum_probs=17.0
Q ss_pred CCCCCCCCCccccccccCCCCCCEEEEEC
Q psy12583 4 PLVDSEGYPRQDVDVYQGLVKDDIILEFG 32 (96)
Q Consensus 4 ~~~~~~~~pa~~~~~~aGLk~GD~Il~vn 32 (96)
+|.|......+ +..|++||.|.-+.
T Consensus 10 Alydy~a~~~~----eLs~~~Gd~i~v~~ 34 (73)
T 2lcs_A 10 ALYDFEPENDN----ELRLAEGDIVFISY 34 (73)
T ss_dssp ESSCBCCSSTT----BCCBCTTCEEEEEE
T ss_pred ECccCCCCCCC----ccCCcCCCEEEEEE
Confidence 45566655555 56789999987654
No 257
>2j05_A RAS GTPase-activating protein 1; GTPase activation, SH3 domain, SH2 domain, SRC homology 3, RAS signaling pathway, proto- oncogene, phosphorylation; 1.5A {Homo sapiens} PDB: 2j06_A
Probab=30.19 E-value=42 Score=17.69 Aligned_cols=25 Identities=8% Similarity=0.139 Sum_probs=16.0
Q ss_pred CCCCCCC-CCccccccccCCCCCCEEEEEC
Q psy12583 4 PLVDSEG-YPRQDVDVYQGLVKDDIILEFG 32 (96)
Q Consensus 4 ~~~~~~~-~pa~~~~~~aGLk~GD~Il~vn 32 (96)
+|.|... .... +..+++||.|.-+.
T Consensus 10 alydy~~~~~~~----eLs~~~Gd~i~v~~ 35 (65)
T 2j05_A 10 AILPYTKVPDTD----EISFLKGDMFIVHN 35 (65)
T ss_dssp ESSCBCCCTTSS----BCCBCTTCEEEEEE
T ss_pred EccccCCCCCCC----cCcCCCCCEEEEeE
Confidence 3445554 4445 56789999987654
No 258
>1zuu_A BZZ1 protein; SH3 domain, unknown function; 0.97A {Saccharomyces cerevisiae} SCOP: b.34.2.1
Probab=30.18 E-value=32 Score=17.62 Aligned_cols=25 Identities=12% Similarity=-0.094 Sum_probs=17.3
Q ss_pred CCCCCCCCCccccccccCCCCCCEEEEEC
Q psy12583 4 PLVDSEGYPRQDVDVYQGLVKDDIILEFG 32 (96)
Q Consensus 4 ~~~~~~~~pa~~~~~~aGLk~GD~Il~vn 32 (96)
+|.+....... +..+++||.|.-+.
T Consensus 6 alydy~~~~~~----eLs~~~Gd~i~v~~ 30 (58)
T 1zuu_A 6 VLYAYVQKDDD----EITITPGDKISLVA 30 (58)
T ss_dssp ECSCBCCCSTT----BCCBCTTCCEEEEE
T ss_pred EeeeECCcCCC----cccCCCCCEEEEeE
Confidence 45566665555 67789999887764
No 259
>2kxc_A Brain-specific angiogenesis inhibitor 1-associate 2-like protein 1; IRTKS-SH3, espfu, complex structure, protein binding; NMR {Homo sapiens}
Probab=29.95 E-value=41 Score=17.81 Aligned_cols=25 Identities=12% Similarity=0.218 Sum_probs=16.8
Q ss_pred CCCCCC-CCCccccccccCCCCCCEEEEEC
Q psy12583 4 PLVDSE-GYPRQDVDVYQGLVKDDIILEFG 32 (96)
Q Consensus 4 ~~~~~~-~~pa~~~~~~aGLk~GD~Il~vn 32 (96)
+|.|.. +.... +..+++||.|.-+.
T Consensus 11 al~dy~a~~~~~----eLs~~~Gd~i~v~~ 36 (67)
T 2kxc_A 11 TIFPHTAGSNKT----LLSFAQGDVITLLI 36 (67)
T ss_dssp ESSCBCCSSCSS----BCCBCTTCEEEESS
T ss_pred EeecCCCCCCCC----CCcCCCCCEEEEeE
Confidence 455655 34444 57799999998764
No 260
>2b86_A Cytoplasmic protein NCK2; NCK SH3 domain, signaling protein; NMR {Homo sapiens} PDB: 2js2_A
Probab=29.94 E-value=40 Score=18.31 Aligned_cols=25 Identities=12% Similarity=0.046 Sum_probs=18.3
Q ss_pred CCCCCCCCCccccccccCCCCCCEEEEEC
Q psy12583 4 PLVDSEGYPRQDVDVYQGLVKDDIILEFG 32 (96)
Q Consensus 4 ~~~~~~~~pa~~~~~~aGLk~GD~Il~vn 32 (96)
+|.|.+..... +..+++||.|.-++
T Consensus 9 Alydy~a~~~~----ELsf~~Gd~i~vl~ 33 (67)
T 2b86_A 9 AKWDYTAQQDQ----ELDIKKNERLWLLD 33 (67)
T ss_dssp ESSCBCCSSTT----SCCBCTTCEEEEEE
T ss_pred EeeeECCCCCC----ccccCCCCEEEEEe
Confidence 46666665555 67789999988775
No 261
>4f14_A Nebulette; SH3 domain, heart muscle, actin-binding protein-peptide COMP; 1.20A {Homo sapiens} PDB: 1ark_A 1neb_A 3i35_A
Probab=29.75 E-value=57 Score=16.80 Aligned_cols=25 Identities=12% Similarity=0.149 Sum_probs=16.5
Q ss_pred CCCCCCCCCccccccccCCCCCCEEEEEC
Q psy12583 4 PLVDSEGYPRQDVDVYQGLVKDDIILEFG 32 (96)
Q Consensus 4 ~~~~~~~~pa~~~~~~aGLk~GD~Il~vn 32 (96)
+|.|....... +..+++||.|.-+.
T Consensus 11 al~dy~~~~~~----eLs~~~Gd~i~v~~ 35 (64)
T 4f14_A 11 AMYDYSAQDED----EVSFRDGDYIVNVQ 35 (64)
T ss_dssp ESSCBCCCSTT----BCCBCTTCEEEEEE
T ss_pred ECeeeCCcCCC----cCCCCCCCEEEEEE
Confidence 45555555555 56789999887653
No 262
>1x2k_A OSTF1, osteoclast stimulating factor 1; SH3 domain, human osteoclast stimulating factor 1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=29.72 E-value=46 Score=17.69 Aligned_cols=25 Identities=20% Similarity=0.025 Sum_probs=17.0
Q ss_pred CCCCCCCCCccccccccCCCCCCEEEEEC
Q psy12583 4 PLVDSEGYPRQDVDVYQGLVKDDIILEFG 32 (96)
Q Consensus 4 ~~~~~~~~pa~~~~~~aGLk~GD~Il~vn 32 (96)
+|.|....... +.-+++||.|.-+.
T Consensus 12 al~dy~~~~~~----eLs~~~Gd~i~v~~ 36 (68)
T 1x2k_A 12 ALYTFEPRTPD----ELYFEEGDIIYITD 36 (68)
T ss_dssp ESSCCCCCSTT----BCCCCSSCEEEEEE
T ss_pred ECceECCCCCC----cccCCCCCEEEEEE
Confidence 45555554445 56789999988764
No 263
>2cuc_A SH3 domain containing ring finger 2; structural genomics, ring finger 2 containing protein, NPPSFA; NMR {Mus musculus}
Probab=29.62 E-value=52 Score=17.43 Aligned_cols=25 Identities=20% Similarity=0.097 Sum_probs=16.0
Q ss_pred CCCCCCCCCccccccccCCCCCCEEEEEC
Q psy12583 4 PLVDSEGYPRQDVDVYQGLVKDDIILEFG 32 (96)
Q Consensus 4 ~~~~~~~~pa~~~~~~aGLk~GD~Il~vn 32 (96)
+|.+....... +..|++||.|.-+.
T Consensus 12 al~~y~~~~~~----eLs~~~Gd~i~v~~ 36 (70)
T 2cuc_A 12 ALHTYSAHRPE----ELDLQKGEGIRVLG 36 (70)
T ss_dssp CCSCBCCCSTT----BCCBCTTCEEEEEE
T ss_pred ECeeECcCCCC----cCCCCCCCEEEEEE
Confidence 44555554444 56688899887764
No 264
>2lj0_A Sorbin and SH3 domain-containing protein 1; R85FL, ponsin, CAP, signaling protein; NMR {Homo sapiens} PDB: 2lj1_A
Probab=29.49 E-value=43 Score=18.19 Aligned_cols=25 Identities=16% Similarity=-0.001 Sum_probs=15.9
Q ss_pred CCCCCCCCCccccccccCCCCCCEEEEEC
Q psy12583 4 PLVDSEGYPRQDVDVYQGLVKDDIILEFG 32 (96)
Q Consensus 4 ~~~~~~~~pa~~~~~~aGLk~GD~Il~vn 32 (96)
+|-|....-.+ +..|++||.|.=+.
T Consensus 11 Alydy~a~~~~----ELs~~~Gd~i~v~~ 35 (65)
T 2lj0_A 11 ALYSYIPQNDD----ELELRDGDIVDVME 35 (65)
T ss_dssp ESSCBCCSSTT----BCCBCTTCEEEEEE
T ss_pred EceeECCCCcC----CcCCCCCCEEEEeE
Confidence 34555554444 56789999887553
No 265
>3cqt_A P59-FYN, proto-oncogene tyrosine-protein kinase FYN; beta barrel, ATP-binding, developmental protein, lipoprotein, manganese, metal-binding; 1.60A {Gallus gallus} PDB: 2l2p_A
Probab=29.31 E-value=43 Score=18.66 Aligned_cols=25 Identities=16% Similarity=0.118 Sum_probs=18.0
Q ss_pred CCCCCCCCCccccccccCCCCCCEEEEEC
Q psy12583 4 PLVDSEGYPRQDVDVYQGLVKDDIILEFG 32 (96)
Q Consensus 4 ~~~~~~~~pa~~~~~~aGLk~GD~Il~vn 32 (96)
+|.|....... +..|++||.|.-+.
T Consensus 10 Alydy~~~~~~----eLs~~~Gd~i~vl~ 34 (79)
T 3cqt_A 10 ALYDYEARTED----DLSFHKGEKFQILN 34 (79)
T ss_dssp ESSCBCCCSTT----BCCBCTTCEEEEEE
T ss_pred ECccCCCCCcC----cCCCCCCCEEEEEE
Confidence 45566665555 67799999998764
No 266
>2drm_A Acanthamoeba myosin IB; SH3 domain, contractIle protein; 1.35A {Acanthamoeba} PDB: 2drk_A
Probab=29.04 E-value=47 Score=16.89 Aligned_cols=25 Identities=16% Similarity=0.157 Sum_probs=16.2
Q ss_pred CCCCCCCCCccccccccCCCCCCEEEEEC
Q psy12583 4 PLVDSEGYPRQDVDVYQGLVKDDIILEFG 32 (96)
Q Consensus 4 ~~~~~~~~pa~~~~~~aGLk~GD~Il~vn 32 (96)
+|.|.+..... +.-+++||.|.-+.
T Consensus 8 al~dy~~~~~~----eLs~~~Gd~i~v~~ 32 (58)
T 2drm_A 8 ALYDYDAQTGD----ELTFKEGDTIIVHQ 32 (58)
T ss_dssp ESSCBCCCSTT----BCCBCTTCEEEEEE
T ss_pred ECccCCCCCcC----CcCCCCCCEEEEEE
Confidence 35555555445 56688899887654
No 267
>1spk_A RSGI RUH-010, riken cDNA 1300006M19; structural genomics, SH3 domain, five-stranded barrel, mouse cDNA; NMR {Mus musculus} SCOP: b.34.2.1
Probab=29.01 E-value=52 Score=17.64 Aligned_cols=25 Identities=8% Similarity=0.208 Sum_probs=17.0
Q ss_pred CCCCCC-CCCccccccccCCCCCCEEEEEC
Q psy12583 4 PLVDSE-GYPRQDVDVYQGLVKDDIILEFG 32 (96)
Q Consensus 4 ~~~~~~-~~pa~~~~~~aGLk~GD~Il~vn 32 (96)
+|.+.. +.... +.-|++||.|.-+.
T Consensus 12 al~dy~a~~~~~----eLs~~~Gd~i~v~~ 37 (72)
T 1spk_A 12 TIFPHTAGNNKT----LLSFAQGDVLTLLI 37 (72)
T ss_dssp CSSCBCCSSCSS----BCCBCTTCEEEECC
T ss_pred EeeeeCCCCCCC----CCcCCCCCEEEEeE
Confidence 456665 34445 56799999998764
No 268
>3c0c_A Endophilin-A2; endocytosis, SH3, voltage-gated calcium channel, endosome, L binding, membrane, phosphoprotein, proto-oncogene, SH3 DOMA; 1.70A {Rattus norvegicus}
Probab=28.88 E-value=44 Score=18.11 Aligned_cols=25 Identities=24% Similarity=0.154 Sum_probs=15.8
Q ss_pred CCCCCCCCCccccccccCCCCCCEEEEEC
Q psy12583 4 PLVDSEGYPRQDVDVYQGLVKDDIILEFG 32 (96)
Q Consensus 4 ~~~~~~~~pa~~~~~~aGLk~GD~Il~vn 32 (96)
+|.|....... +..+++||.|.-+.
T Consensus 18 al~dy~~~~~~----eLs~~~Gd~i~v~~ 42 (73)
T 3c0c_A 18 ALYDFEPENDG----ELGFREGDLITLTN 42 (73)
T ss_dssp ESSCBCCSSTT----BCCBCTTCEEEEEE
T ss_pred ECccCCCCCCC----CccCcCCCEEEEEE
Confidence 34555554444 56788888887654
No 269
>2l0a_A STAM-1, signal transducing adapter molecule 1; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Homo sapiens}
Probab=28.86 E-value=44 Score=18.45 Aligned_cols=25 Identities=16% Similarity=0.134 Sum_probs=16.0
Q ss_pred CCCCCCCCCccccccccCCCCCCEEEEEC
Q psy12583 4 PLVDSEGYPRQDVDVYQGLVKDDIILEFG 32 (96)
Q Consensus 4 ~~~~~~~~pa~~~~~~aGLk~GD~Il~vn 32 (96)
+|.|.+..... +..|++||.|.-+.
T Consensus 22 Alydy~a~~~~----eLsf~~Gd~i~Vl~ 46 (72)
T 2l0a_A 22 AIYDFEAAEDN----ELTFKAGEIITVLD 46 (72)
T ss_dssp ESSCBCCSSTT----BCCBCTTCEEEEEE
T ss_pred ECCccCCCCCC----ccCCCCCCEEEEEE
Confidence 35555555445 56688888887664
No 270
>2dl3_A Sorbin and SH3 domain-containing protein 1; ponsin, C-CBL-associated protein, CAP, SH3 domain protein 5 SH3P12, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2dlm_A
Probab=28.82 E-value=45 Score=17.66 Aligned_cols=25 Identities=20% Similarity=0.170 Sum_probs=16.4
Q ss_pred CCCCCCCCCccccccccCCCCCCEEEEEC
Q psy12583 4 PLVDSEGYPRQDVDVYQGLVKDDIILEFG 32 (96)
Q Consensus 4 ~~~~~~~~pa~~~~~~aGLk~GD~Il~vn 32 (96)
+|.|....... +..|++||.|.-+.
T Consensus 12 al~dy~~~~~~----eLs~~~Gd~i~v~~ 36 (68)
T 2dl3_A 12 AKFDFKAQTLK----ELPLQKGDIVYIYK 36 (68)
T ss_dssp ESSCBCCSSTT----BCCBCTTCEEEEEE
T ss_pred ECccCCCCCcC----CccCCCCCEEEEeE
Confidence 34555554445 56788999988664
No 271
>1b07_A Protein (proto-oncogene CRK (CRK)); SH3 domain, inhibitors, peptoids, protein-protein recognition, proline-rich motifs, signal transduction; 2.50A {Mus musculus} SCOP: b.34.2.1
Probab=28.74 E-value=45 Score=17.76 Aligned_cols=25 Identities=24% Similarity=0.201 Sum_probs=17.4
Q ss_pred CCCCCCCCCccccccccCCCCCCEEEEEC
Q psy12583 4 PLVDSEGYPRQDVDVYQGLVKDDIILEFG 32 (96)
Q Consensus 4 ~~~~~~~~pa~~~~~~aGLk~GD~Il~vn 32 (96)
+|.|....... +.-+++||.|.-+.
T Consensus 8 Alydy~~~~~~----eLsf~~Gd~i~v~~ 32 (65)
T 1b07_A 8 ALFDFNGNDEE----DLPFKKGDILRIRD 32 (65)
T ss_dssp ESSCBCCSSTT----BCCBCTTCEEEEEE
T ss_pred ECCcCCCCCCC----ccCCcCCCEEEEEE
Confidence 45566665555 56789999988765
No 272
>2dlp_A KIAA1783 protein; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=28.68 E-value=44 Score=18.75 Aligned_cols=25 Identities=12% Similarity=0.002 Sum_probs=18.1
Q ss_pred CCCCCCCCCccccccccCCCCCCEEEEEC
Q psy12583 4 PLVDSEGYPRQDVDVYQGLVKDDIILEFG 32 (96)
Q Consensus 4 ~~~~~~~~pa~~~~~~aGLk~GD~Il~vn 32 (96)
+|.|....... +..++.||.|.-+.
T Consensus 13 al~dy~~~~~~----eLsf~~Gd~i~v~~ 37 (85)
T 2dlp_A 13 ALRSYITDNCS----LLSFHRGDLIKLLP 37 (85)
T ss_dssp ESSCBCCSSSS----BCCBCTTCEEEECC
T ss_pred ECCCCCccCcC----CccCcCCCEEEEEE
Confidence 45666665555 67799999998765
No 273
>2k9g_A SH3 domain-containing kinase-binding protein 1; CIN85, adaptor protein, downregulation, CBL, apoptosis, junction, cytoplasmic vesicle, cytoskeleton; NMR {Homo sapiens}
Probab=28.52 E-value=44 Score=18.00 Aligned_cols=25 Identities=12% Similarity=0.092 Sum_probs=16.4
Q ss_pred CCCCCCCCCccccccccCCCCCCEEEEEC
Q psy12583 4 PLVDSEGYPRQDVDVYQGLVKDDIILEFG 32 (96)
Q Consensus 4 ~~~~~~~~pa~~~~~~aGLk~GD~Il~vn 32 (96)
+|.+....... +..|++||.|.-+.
T Consensus 14 al~dy~~~~~~----eLs~~~Gd~i~v~~ 38 (73)
T 2k9g_A 14 VIFPYEAQNDD----ELTIKEGDIVTLIN 38 (73)
T ss_dssp ECSCBCCSSTT----BCCBCTTCEEEEEE
T ss_pred ECccCCCCCCC----eeeECCCCEEEEEE
Confidence 34555554445 56788999888764
No 274
>1x2p_A Protein arginine N-methyltransferase 2; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=28.43 E-value=49 Score=17.54 Aligned_cols=25 Identities=12% Similarity=0.200 Sum_probs=16.1
Q ss_pred CCCCCCCCCccccccccCCCCCCEEEEEC
Q psy12583 4 PLVDSEGYPRQDVDVYQGLVKDDIILEFG 32 (96)
Q Consensus 4 ~~~~~~~~pa~~~~~~aGLk~GD~Il~vn 32 (96)
+|.|....... +.-+++||.|.-+.
T Consensus 12 al~dy~~~~~~----eLs~~~Gd~i~v~~ 36 (68)
T 1x2p_A 12 AIADYAATDET----QLSFLRGEKILILR 36 (68)
T ss_dssp ESSCCCCSSTT----BCCCCTTCEEEEEE
T ss_pred ECceECCCCcC----CcCCCCCCEEEEEE
Confidence 34555554444 56688999888765
No 275
>2ak5_A RHO guanine nucleotide exchange factor 7; adaptor proteins, CIN85, PIX/COOL, protein-protein interaction, X-RAY, endocytosis; 1.85A {Rattus norvegicus} PDB: 1zsg_A
Probab=28.37 E-value=48 Score=17.29 Aligned_cols=25 Identities=12% Similarity=0.031 Sum_probs=15.9
Q ss_pred CCCCCCCCCccccccccCCCCCCEEEEEC
Q psy12583 4 PLVDSEGYPRQDVDVYQGLVKDDIILEFG 32 (96)
Q Consensus 4 ~~~~~~~~pa~~~~~~aGLk~GD~Il~vn 32 (96)
+|.+....... +..+++||.|.-+.
T Consensus 11 al~dy~~~~~~----eLs~~~Gd~i~v~~ 35 (64)
T 2ak5_A 11 AKFNFQQTNED----ELSFSKGDVIHVTR 35 (64)
T ss_dssp ESSCBCCCSTT----BCCBCTTCEEEEEE
T ss_pred EccccCCcCcC----cccCCCCCEEEEeE
Confidence 34555554444 56788999887654
No 276
>2dil_A Proline-serine-threonine phosphatase-interacting protein 1; SH3 domain, PEST phosphatase-interacting protein 1, CD2- binding protein 1; NMR {Homo sapiens}
Probab=28.20 E-value=55 Score=17.38 Aligned_cols=25 Identities=20% Similarity=0.078 Sum_probs=16.8
Q ss_pred CCCCCCCCCccccccccCCCCCCEEEEEC
Q psy12583 4 PLVDSEGYPRQDVDVYQGLVKDDIILEFG 32 (96)
Q Consensus 4 ~~~~~~~~pa~~~~~~aGLk~GD~Il~vn 32 (96)
+|.+......+ +.-+++||.|.-+.
T Consensus 13 al~dy~~~~~~----eLs~~~Gd~i~v~~ 37 (69)
T 2dil_A 13 ALYDYTAQNPD----ELDLSAGDILEVIL 37 (69)
T ss_dssp CCSCBCCSSSS----SCCBCTTCEEEEEE
T ss_pred ECccCCccCcC----ccCCCCCCEEEEEE
Confidence 45555555455 56788899888764
No 277
>2d8j_A FYN-related kinase; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=28.18 E-value=34 Score=18.62 Aligned_cols=25 Identities=12% Similarity=0.115 Sum_probs=16.9
Q ss_pred CCCCCCCCCccccccccCCCCCCEEEEEC
Q psy12583 4 PLVDSEGYPRQDVDVYQGLVKDDIILEFG 32 (96)
Q Consensus 4 ~~~~~~~~pa~~~~~~aGLk~GD~Il~vn 32 (96)
+|.|....... +..|++||.|.-+.
T Consensus 12 alydy~~~~~~----eLs~~~Gd~i~v~~ 36 (77)
T 2d8j_A 12 ALFDYQARTAE----DLSFRAGDKLQVLD 36 (77)
T ss_dssp ESSCBCCSSSS----BCCBCTTCCEEEEE
T ss_pred EccCCCCCCCC----ccCCCCCCEEEEEE
Confidence 45555555455 56788999888765
No 278
>2jt4_A Cytoskeleton assembly control protein SLA1; endocytosis, SH3, actin-binding, cytoplasm, cytoskeleton, phosphorylation, SH3 domain, DNA damage, DNA repair, nucleus; NMR {Saccharomyces cerevisiae}
Probab=28.09 E-value=46 Score=17.73 Aligned_cols=25 Identities=8% Similarity=-0.037 Sum_probs=16.5
Q ss_pred CCCCCCCCCccccccccCCCCCCEEEEEC
Q psy12583 4 PLVDSEGYPRQDVDVYQGLVKDDIILEFG 32 (96)
Q Consensus 4 ~~~~~~~~pa~~~~~~aGLk~GD~Il~vn 32 (96)
+|.|....... +..|++||.|.-+.
T Consensus 11 al~dy~~~~~~----eLs~~~Gd~i~v~~ 35 (71)
T 2jt4_A 11 VQYDFMAESQD----ELTIKSGDKVYILD 35 (71)
T ss_dssp ECSCBCCSSTT----BCCBCTTCEEEEEE
T ss_pred EcccCCCCCCC----cccCCCCCEEEEEE
Confidence 35555554445 56789999888764
No 279
>2dnu_A RUH-061, SH3 multiple domains 1; RSGI, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=28.07 E-value=57 Score=17.38 Aligned_cols=25 Identities=8% Similarity=0.012 Sum_probs=17.1
Q ss_pred CCCCCCCCCccccccccCCCCCCEEEEEC
Q psy12583 4 PLVDSEGYPRQDVDVYQGLVKDDIILEFG 32 (96)
Q Consensus 4 ~~~~~~~~pa~~~~~~aGLk~GD~Il~vn 32 (96)
+|.|....... +.-|++||.|.-+.
T Consensus 13 al~dy~~~~~~----eLs~~~Gd~i~v~~ 37 (71)
T 2dnu_A 13 TVQPYTSQSKD----EIGFEKGVTVEVIR 37 (71)
T ss_dssp CSSCBCCSSTT----BCCBCTTCEEEECC
T ss_pred ECCccCCCCCC----CCcCCCCCEEEEeE
Confidence 45566555555 56789999988764
No 280
>1uhc_A KIAA1010 protein; beta barrel, SH3, human cDNA, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=27.97 E-value=48 Score=18.25 Aligned_cols=25 Identities=0% Similarity=-0.081 Sum_probs=16.4
Q ss_pred CCCCCCCCCccccccccCCCCCCEEEEEC
Q psy12583 4 PLVDSEGYPRQDVDVYQGLVKDDIILEFG 32 (96)
Q Consensus 4 ~~~~~~~~pa~~~~~~aGLk~GD~Il~vn 32 (96)
+|.|....... +..|++||.|.-+.
T Consensus 18 Alydy~~~~~~----eLs~~~Gd~i~vl~ 42 (79)
T 1uhc_A 18 AVYTFKARNPN----ELSVSANQKLKILE 42 (79)
T ss_dssp ESSCBCCCSSS----BCCBCTTCEEEEEE
T ss_pred ECccCCCCCCC----ccCCCCCCEEEEEE
Confidence 35555555445 56788888887764
No 281
>1gbq_A GRB2; complex (signal transduction/peptide), SH3 domain; NMR {Mus musculus} SCOP: b.34.2.1 PDB: 1gbr_A 2gbq_A 3gbq_A 4gbq_A
Probab=27.96 E-value=46 Score=18.10 Aligned_cols=25 Identities=12% Similarity=0.120 Sum_probs=17.1
Q ss_pred CCCCCCCCCccccccccCCCCCCEEEEEC
Q psy12583 4 PLVDSEGYPRQDVDVYQGLVKDDIILEFG 32 (96)
Q Consensus 4 ~~~~~~~~pa~~~~~~aGLk~GD~Il~vn 32 (96)
+|.|....... +..+++||.|.-+.
T Consensus 14 alydy~~~~~~----eLs~~~Gd~i~v~~ 38 (74)
T 1gbq_A 14 AKYDFKATADD----ELSFKRGDILKVLN 38 (74)
T ss_dssp ESSCBCCSSTT----BCCBCTTCEEECCB
T ss_pred ECccCCCCCCC----eeeEcCCCEEEEeE
Confidence 45566655555 57799999988654
No 282
>2ebp_A SAM and SH3 domain-containing protein 1; proline-glutamate repeat-containing protein, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2kea_A
Probab=27.74 E-value=48 Score=18.11 Aligned_cols=25 Identities=24% Similarity=0.042 Sum_probs=16.8
Q ss_pred CCCCCCCC--CccccccccCCCCCCEEEEEC
Q psy12583 4 PLVDSEGY--PRQDVDVYQGLVKDDIILEFG 32 (96)
Q Consensus 4 ~~~~~~~~--pa~~~~~~aGLk~GD~Il~vn 32 (96)
+|.|.... ... +..|++||.|.-+.
T Consensus 14 alydy~~~~~~~~----eLs~~~Gd~i~v~~ 40 (73)
T 2ebp_A 14 VHTDFTPSPYDTD----SLKLKKGDIIDIIS 40 (73)
T ss_dssp ECSCBCCCTTCCS----BCCBCSSCEEEEEE
T ss_pred EeeccCCCCCCCC----ccCCCCCCEEEEEE
Confidence 45566553 334 57799999988765
No 283
>2dl7_A KIAA0769 protein; SH3 domain, FCHSD2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=27.63 E-value=48 Score=17.91 Aligned_cols=25 Identities=24% Similarity=0.242 Sum_probs=17.6
Q ss_pred CCCCCCCCCccccccccCCCCCCEEEEEC
Q psy12583 4 PLVDSEGYPRQDVDVYQGLVKDDIILEFG 32 (96)
Q Consensus 4 ~~~~~~~~pa~~~~~~aGLk~GD~Il~vn 32 (96)
+|.|....... +.-+++||.|.-+.
T Consensus 13 alydy~~~~~~----eLsf~~Gd~i~v~~ 37 (73)
T 2dl7_A 13 ALYDYEGQTDD----ELSFPEGAIIRILN 37 (73)
T ss_dssp ESSCBCCSSTT----BCCBCTTCEEEEEE
T ss_pred ECccCCcCCCC----cCCCCCCCEEEEEE
Confidence 45566655555 57789999998775
No 284
>1gyt_A Cytosol aminopeptidase; hydrolase, DNA recombination; 2.5A {Escherichia coli} SCOP: c.56.5.3 c.50.1.1
Probab=27.37 E-value=17 Score=28.23 Aligned_cols=24 Identities=13% Similarity=0.171 Sum_probs=19.2
Q ss_pred CCCCCccccccccCCCCCCEEEEECCeec
Q psy12583 8 SEGYPRQDVDVYQGLVKDDIILEFGPINS 36 (96)
Q Consensus 8 ~~~~pa~~~~~~aGLk~GD~Il~vng~~~ 36 (96)
.||+|-. .| .||||.|.+.||+.+
T Consensus 323 ~ENm~sg----~A-~rPgDVits~~GkTV 346 (503)
T 1gyt_A 323 CENMPGG----RA-YRPGDVLTTMSGQTV 346 (503)
T ss_dssp EEECCST----TC-CCTTCEEECTTSCEE
T ss_pred eccCCCC----CC-CCCCCEEEeCCCcEE
Confidence 4677777 55 999999999999753
No 285
>2bzy_A CRK-like protein, CRKL SH3C; SH3 domain, dimer, nuclear export; 2.5A {Homo sapiens} PDB: 2bzx_A
Probab=27.29 E-value=37 Score=18.10 Aligned_cols=25 Identities=12% Similarity=0.025 Sum_probs=16.1
Q ss_pred CCCCCCCC--CccccccccCCCCCCEEEEEC
Q psy12583 4 PLVDSEGY--PRQDVDVYQGLVKDDIILEFG 32 (96)
Q Consensus 4 ~~~~~~~~--pa~~~~~~aGLk~GD~Il~vn 32 (96)
+|.+.... ... +..+++||.|.-+.
T Consensus 6 al~dy~~~~~~~~----eLsf~~Gd~i~v~~ 32 (67)
T 2bzy_A 6 AIQKRVPCAYDKT----ALALEVGDIVKVTR 32 (67)
T ss_dssp ECSCBCSEEECTT----BCCBCTTCEEEEEE
T ss_pred EeeeECCCCCCCC----ccccCCCCEEEEEE
Confidence 34555443 344 56799999988654
No 286
>1ugv_A KIAA0621, olygophrenin-1 like protein; beta barrel, GRAF protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=27.23 E-value=45 Score=18.04 Aligned_cols=25 Identities=4% Similarity=-0.020 Sum_probs=17.1
Q ss_pred CCCCCCCCCccccccccCCCCCCEEEEEC
Q psy12583 4 PLVDSEGYPRQDVDVYQGLVKDDIILEFG 32 (96)
Q Consensus 4 ~~~~~~~~pa~~~~~~aGLk~GD~Il~vn 32 (96)
+|.|....... +.-++.||.|.-+.
T Consensus 15 alydy~~~~~~----eLsf~~Gd~i~v~~ 39 (72)
T 1ugv_A 15 ALYACKAEHDS----ELSFTAGTVFDNVH 39 (72)
T ss_dssp ESSCBCCCSSS----BCCBCTTCEEBSCC
T ss_pred EccccCCcCCC----EeCCcCCCEEEEEE
Confidence 45566665555 67799999986543
No 287
>3ulr_B SRC substrate cortactin; SH3, protein-protein interaction, hydrolase, protein binding; 1.65A {Mus musculus} SCOP: b.34.2.0 PDB: 2d1x_A
Probab=27.22 E-value=65 Score=16.68 Aligned_cols=24 Identities=25% Similarity=0.227 Sum_probs=15.5
Q ss_pred CCCCCCCCccccccccCCCCCCEEEEEC
Q psy12583 5 LVDSEGYPRQDVDVYQGLVKDDIILEFG 32 (96)
Q Consensus 5 ~~~~~~~pa~~~~~~aGLk~GD~Il~vn 32 (96)
|.|....... +..+++||.|.-+.
T Consensus 15 l~dy~~~~~~----eLs~~~Gd~i~v~~ 38 (65)
T 3ulr_B 15 LYDYQAAGDD----EISFDPDDIITNIE 38 (65)
T ss_dssp CSCBCCCSTT----BCCBCTTCEEEEEE
T ss_pred EeeECCCCcC----EeeEecCCEEEEEE
Confidence 4455544444 56788899887664
No 288
>2enm_A Sorting nexin-9; SH3-like barrel, protein transport, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=27.21 E-value=53 Score=17.86 Aligned_cols=25 Identities=12% Similarity=0.034 Sum_probs=17.4
Q ss_pred CCCCCCCC-CccccccccCCCCCCEEEEEC
Q psy12583 4 PLVDSEGY-PRQDVDVYQGLVKDDIILEFG 32 (96)
Q Consensus 4 ~~~~~~~~-pa~~~~~~aGLk~GD~Il~vn 32 (96)
+|.|.... ... +..|++||.|.-+.
T Consensus 14 al~dy~~~~~~~----eLs~~~Gd~i~v~~ 39 (77)
T 2enm_A 14 VMYDFAAEPGNN----ELTVTEGEIITVTN 39 (77)
T ss_dssp ESSCCCCCTTSS----BCCCCTTCEEEEEE
T ss_pred ECccCCCCCCCC----eecCCCCCEEEEeE
Confidence 45566554 555 67799999988765
No 289
>2dl8_A SLIT-ROBO RHO GTPase-activating protein 2; SH3 domain, formin-binding protein 2, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=27.17 E-value=50 Score=17.80 Aligned_cols=25 Identities=16% Similarity=0.145 Sum_probs=16.0
Q ss_pred CCCCCCCCCccccccccCCCCCCEEEEEC
Q psy12583 4 PLVDSEGYPRQDVDVYQGLVKDDIILEFG 32 (96)
Q Consensus 4 ~~~~~~~~pa~~~~~~aGLk~GD~Il~vn 32 (96)
+|.|....-.. +..+++||.|.-+.
T Consensus 14 al~dy~~~~~~----eLs~~~Gd~i~v~~ 38 (72)
T 2dl8_A 14 AKFDYVGRTAR----ELSFKKGASLLLYQ 38 (72)
T ss_dssp ESSCBCCSSSS----BCCBCTTCEEEEEE
T ss_pred ECccCCcCCCC----EeccCCCCEEEEEe
Confidence 35555554444 56788899887664
No 290
>4esr_A Jouberin; AHI-1, AHI1, AHI-1 SH3 domain, SH3 domain, dynamin-2, protei binding, chronic myeloid leukemia; 1.53A {Homo sapiens}
Probab=27.06 E-value=66 Score=16.99 Aligned_cols=25 Identities=24% Similarity=0.181 Sum_probs=16.8
Q ss_pred CCCCCCCCCccccccccCCCCCCEEEEEC
Q psy12583 4 PLVDSEGYPRQDVDVYQGLVKDDIILEFG 32 (96)
Q Consensus 4 ~~~~~~~~pa~~~~~~aGLk~GD~Il~vn 32 (96)
+|.|....... +..+++||.|.-+.
T Consensus 11 al~dy~~~~~~----eLs~~~Gd~i~v~~ 35 (69)
T 4esr_A 11 ALYDYTANRSD----ELTIHRGDIIRVFF 35 (69)
T ss_dssp ESSCBCCCSTT----BCCBCTTCEEEEEE
T ss_pred ECccCCCCCcC----cCCCCCCCEEEEEE
Confidence 45555555555 56788999888664
No 291
>2rf0_A Mitogen-activated protein kinase kinase kinase 10; MAP3K10, MLK2, SH3 domain, TKL kinase, MKN28, structural GEN structural genomics consortium, SGC; 2.00A {Homo sapiens}
Probab=27.00 E-value=47 Score=19.14 Aligned_cols=24 Identities=17% Similarity=0.142 Sum_probs=13.9
Q ss_pred CCCCCCCCccccccccCCCCCCEEEEEC
Q psy12583 5 LVDSEGYPRQDVDVYQGLVKDDIILEFG 32 (96)
Q Consensus 5 ~~~~~~~pa~~~~~~aGLk~GD~Il~vn 32 (96)
|.|.+..... +..+++||.|.-+.
T Consensus 35 lydy~a~~~~----ELsf~~GD~I~Vl~ 58 (89)
T 2rf0_A 35 VFDYEAAGDE----ELTLRRGDRVQVLS 58 (89)
T ss_dssp CSCBCCSSTT----BCCBCTTCEEEEEE
T ss_pred CCccCCCCCC----ccccCCCCEEEEEe
Confidence 4444444444 45677777777654
No 292
>3rnj_A Brain-specific angiogenesis inhibitor 1-associate 2; structural genomics, structural genomics consortium, SGC, BE barrel; HET: EDT; 1.50A {Homo sapiens} SCOP: b.34.2.1
Probab=26.93 E-value=50 Score=17.42 Aligned_cols=13 Identities=15% Similarity=0.169 Sum_probs=10.4
Q ss_pred cCCCCCCEEEEEC
Q psy12583 20 QGLVKDDIILEFG 32 (96)
Q Consensus 20 aGLk~GD~Il~vn 32 (96)
..+++||.|.-+.
T Consensus 25 Lsf~~Gd~i~v~~ 37 (67)
T 3rnj_A 25 LSFKEGDLITLLV 37 (67)
T ss_dssp CCBCTTCEEEECS
T ss_pred ccCCCCCEEEEee
Confidence 6789999988654
No 293
>1wxt_A Hypothetical protein FLJ21522; SH3 domain, EPS8-related protein 3, protein-protein interaction, structural genomics; NMR {Homo sapiens}
Probab=26.82 E-value=53 Score=17.46 Aligned_cols=25 Identities=12% Similarity=0.072 Sum_probs=17.1
Q ss_pred CCCCCCCCCccccccccCCCCCCEEEEEC
Q psy12583 4 PLVDSEGYPRQDVDVYQGLVKDDIILEFG 32 (96)
Q Consensus 4 ~~~~~~~~pa~~~~~~aGLk~GD~Il~vn 32 (96)
+|.|.+..... +..+++||.|.-+.
T Consensus 12 alydy~~~~~~----eLs~~~Gd~i~v~~ 36 (68)
T 1wxt_A 12 VLYEFEARNPR----ELTVVQGEKLEVLD 36 (68)
T ss_dssp ESSCBCCCSSS----BCCBCTTCEEEEEE
T ss_pred ECceECCCCcC----cCCCCCCCEEEEEE
Confidence 45566655555 56788999888765
No 294
>2jvf_A De novo protein M7; tetrapeptide fragment-based protein design, artificial fold; NMR {Unidentified} SCOP: k.41.1.1
Probab=26.77 E-value=99 Score=17.96 Aligned_cols=21 Identities=24% Similarity=0.401 Sum_probs=17.2
Q ss_pred ceEEEEEEeCCceEEEEEEeec
Q psy12583 55 TDIPITVLRNEGTRQRLVLRPQ 76 (96)
Q Consensus 55 ~~i~l~V~R~g~~~~~l~v~p~ 76 (96)
-.+++++.|+| +++.+.+...
T Consensus 6 vditikiqrdg-qeieidirvs 26 (96)
T 2jvf_A 6 VDITIKIQRDG-QEIEIDIRVS 26 (96)
T ss_dssp CEEEEEEEETT-EEEEEEEECC
T ss_pred EEEEEEEeeCC-eEEEEEEEEc
Confidence 46889999999 9888877654
No 295
>3lnn_A Membrane fusion protein (MFP) heavy metal cation ZNEB (CZCB-LIKE); structural genomics, PSI-2, protein structure initiative; 2.80A {Cupriavidus metallidurans}
Probab=26.74 E-value=27 Score=24.63 Aligned_cols=16 Identities=25% Similarity=0.358 Sum_probs=12.6
Q ss_pred cccccCCCCCCEEEEE
Q psy12583 16 VDVYQGLVKDDIILEF 31 (96)
Q Consensus 16 ~~~~aGLk~GD~Il~v 31 (96)
+-|..||++||+|+-=
T Consensus 328 v~V~~GL~~Gd~VV~~ 343 (359)
T 3lnn_A 328 MEVKSGLSAGDRVVVK 343 (359)
T ss_dssp EECCSSCCTTCEEECC
T ss_pred EEEecCCCCCCEEEEc
Confidence 3467799999999853
No 296
>2yup_A Vinexin; sorbin and SH3 domain-containing protein 3, SH3-containing adapter molecule 1, SCAM-1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=26.69 E-value=53 Score=18.58 Aligned_cols=25 Identities=12% Similarity=-0.051 Sum_probs=17.0
Q ss_pred CCCCCCCCCccccccccCCCCCCEEEEEC
Q psy12583 4 PLVDSEGYPRQDVDVYQGLVKDDIILEFG 32 (96)
Q Consensus 4 ~~~~~~~~pa~~~~~~aGLk~GD~Il~vn 32 (96)
+|.|....... +..|++||.|.-+.
T Consensus 22 alydy~~~~~~----eLsf~~Gd~i~v~~ 46 (90)
T 2yup_A 22 AQYTFKGDLEV----ELSFRKGEHICLIR 46 (90)
T ss_dssp ECSCCCCCSSS----BCCCCTTCEEEESS
T ss_pred EeecCCcCCcC----cCCCCCCCEEEEEE
Confidence 35555554445 56799999988765
No 297
>2l66_A SSO7C4, transcriptional regulator, ABRB family; DNA binding protein, transcription regulator; NMR {Sulfolobus solfataricus}
Probab=26.65 E-value=22 Score=18.61 Aligned_cols=12 Identities=8% Similarity=0.094 Sum_probs=9.1
Q ss_pred ccCCCCCCEEEE
Q psy12583 19 YQGLVKDDIILE 30 (96)
Q Consensus 19 ~aGLk~GD~Il~ 30 (96)
+.||++||.+.-
T Consensus 23 ~lgi~~Gd~v~i 34 (53)
T 2l66_A 23 KFQIKEGDLVKV 34 (53)
T ss_dssp HSCCCTTCEEEE
T ss_pred HcCcCCCCEEEE
Confidence 668899997653
No 298
>2eyx_A V-CRK sarcoma virus CT10 oncogene homolog isoform A; SH3, signaling protein; NMR {Homo sapiens}
Probab=26.58 E-value=40 Score=18.00 Aligned_cols=13 Identities=8% Similarity=-0.008 Sum_probs=9.9
Q ss_pred ccCCCCCCEEEEE
Q psy12583 19 YQGLVKDDIILEF 31 (96)
Q Consensus 19 ~aGLk~GD~Il~v 31 (96)
+..|++||.|.-+
T Consensus 24 eLs~~~Gd~i~v~ 36 (67)
T 2eyx_A 24 ALALEVGELVKVT 36 (67)
T ss_dssp BCCBCSSEEEEEE
T ss_pred ccccCCCCEEEEE
Confidence 5678889988755
No 299
>2eqi_A Phospholipase C, gamma 2; SH3 domain, PLCG2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=26.36 E-value=53 Score=17.45 Aligned_cols=25 Identities=12% Similarity=0.146 Sum_probs=16.7
Q ss_pred CCCCCCCCCccccccccCCCCCCEEEEEC
Q psy12583 4 PLVDSEGYPRQDVDVYQGLVKDDIILEFG 32 (96)
Q Consensus 4 ~~~~~~~~pa~~~~~~aGLk~GD~Il~vn 32 (96)
+|.+....... +..+++||.|.-+.
T Consensus 12 alydy~~~~~~----eLs~~~Gd~i~v~~ 36 (69)
T 2eqi_A 12 ALYDYKAKRSD----ELTFCRGALIHNVS 36 (69)
T ss_dssp ESSCBCCCSSS----CCCBCTTCEEESCC
T ss_pred ECeeECCCCcC----ccCCCCCCEEEEEE
Confidence 45555555445 56789999988654
No 300
>2ct4_A CDC42-interacting protein 4; thyroid receptor interacting protein 10, SH3 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=26.21 E-value=52 Score=17.52 Aligned_cols=25 Identities=8% Similarity=0.084 Sum_probs=16.7
Q ss_pred CCCCCCCCCccccccccCCCCCCEEEEEC
Q psy12583 4 PLVDSEGYPRQDVDVYQGLVKDDIILEFG 32 (96)
Q Consensus 4 ~~~~~~~~pa~~~~~~aGLk~GD~Il~vn 32 (96)
+|.|....... +.-|++||.|.-+.
T Consensus 12 alydy~~~~~~----eLs~~~Gd~i~vl~ 36 (70)
T 2ct4_A 12 AIYHFEGSSEG----TISMAEGEDLSLME 36 (70)
T ss_dssp ESSCBCCCSTT----CCCBCTTCEEEEEE
T ss_pred EcccCCCCCCC----cCCCCCCCEEEEEe
Confidence 35555555455 56788899888765
No 301
>2kgt_A Tyrosine-protein kinase 6; SH3 domain, SRC kinase, PTK6, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; NMR {Homo sapiens}
Probab=26.15 E-value=40 Score=18.11 Aligned_cols=23 Identities=13% Similarity=0.057 Sum_probs=13.6
Q ss_pred CCCCCCCCCccccccccCCCCCCEEEE
Q psy12583 4 PLVDSEGYPRQDVDVYQGLVKDDIILE 30 (96)
Q Consensus 4 ~~~~~~~~pa~~~~~~aGLk~GD~Il~ 30 (96)
+|.|....... +..+++||.|.-
T Consensus 15 alydy~~~~~~----eLs~~~Gd~i~v 37 (72)
T 2kgt_A 15 GLWDFKSRTDE----ELSFRAGDVFHV 37 (72)
T ss_dssp CCTTCBCSSTT----SCBCCTTCCEEE
T ss_pred EcccCCCCCcC----CcCCCCCCEEEE
Confidence 34555544444 456788887764
No 302
>2dm1_A Protein VAV-2; RHO family guanine nucleotide exchange factor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=26.14 E-value=54 Score=17.71 Aligned_cols=25 Identities=8% Similarity=0.070 Sum_probs=16.8
Q ss_pred CCCCCCCCCccccccccCCCCCCEEEEEC
Q psy12583 4 PLVDSEGYPRQDVDVYQGLVKDDIILEFG 32 (96)
Q Consensus 4 ~~~~~~~~pa~~~~~~aGLk~GD~Il~vn 32 (96)
+|.|....-.. +.-|++||.|.-+.
T Consensus 12 al~dy~~~~~~----eLs~~~Gd~i~v~~ 36 (73)
T 2dm1_A 12 ARYNFAARDMR----ELSLREGDVVRIYS 36 (73)
T ss_dssp ESSCBCCCSTT----BCCBCTTCEEECCB
T ss_pred ECccCCcCCCC----cCCCCCCCEEEEEE
Confidence 45555554445 56799999988654
No 303
>1ue9_A Intersectin 2; beta barrel, SH3 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, endocytosis/exocytosis complex; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=26.14 E-value=56 Score=17.91 Aligned_cols=25 Identities=12% Similarity=0.014 Sum_probs=16.4
Q ss_pred CCCCCCCCCccccccccCCCCCCEEEEEC
Q psy12583 4 PLVDSEGYPRQDVDVYQGLVKDDIILEFG 32 (96)
Q Consensus 4 ~~~~~~~~pa~~~~~~aGLk~GD~Il~vn 32 (96)
+|.|....... +..|++||.|.-+.
T Consensus 12 al~dy~~~~~~----eLs~~~Gd~i~v~~ 36 (80)
T 1ue9_A 12 VTSAYVASGSE----QLSLAPGQLILILK 36 (80)
T ss_dssp ECSCCCCCSTT----BCCCCTTCEEEEEE
T ss_pred ECcccCCCCCC----CCCCCCCCEEEEEE
Confidence 34555554445 56788999888664
No 304
>3i5r_A Phosphatidylinositol 3-kinase regulatory subunit alpha; SH3 domain, peptide complex, alternative splicing, disease mutation, HOST-virus interaction, phosphoprotein, polymorphism; 1.70A {Homo sapiens} SCOP: b.34.2.1 PDB: 3i5s_A 1pht_A 1pnj_A 2pni_A 1pks_A 1pkt_A
Probab=26.13 E-value=52 Score=18.28 Aligned_cols=24 Identities=21% Similarity=0.075 Sum_probs=17.3
Q ss_pred CCCCCCCCCccccccccCCCCCCEEEEE
Q psy12583 4 PLVDSEGYPRQDVDVYQGLVKDDIILEF 31 (96)
Q Consensus 4 ~~~~~~~~pa~~~~~~aGLk~GD~Il~v 31 (96)
+|.+....... +..|++||.|.-+
T Consensus 10 Alydy~~~~~~----eLs~~~Gd~I~V~ 33 (83)
T 3i5r_A 10 ALYDYKKEREE----DIDLHLGDILTVN 33 (83)
T ss_dssp ECSCBCCCSTT----BCCBCTTCEEEEE
T ss_pred EccccCCCCCC----ccccCCCCEEEEe
Confidence 45566655555 6789999999866
No 305
>2ed0_A ABL interactor 2; coiled coil, cytoskeleton, nuclear protein, phosphorylation, SH3 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=26.06 E-value=51 Score=18.11 Aligned_cols=24 Identities=13% Similarity=0.069 Sum_probs=13.6
Q ss_pred CCCCCCCCccccccccCCCCCCEEEEEC
Q psy12583 5 LVDSEGYPRQDVDVYQGLVKDDIILEFG 32 (96)
Q Consensus 5 ~~~~~~~pa~~~~~~aGLk~GD~Il~vn 32 (96)
|.|....... +..+++||.|.-+.
T Consensus 23 l~dy~~~~~~----eLsf~~Gd~i~v~~ 46 (78)
T 2ed0_A 23 IYDYTKDKED----ELSFQEGAIIYVIK 46 (78)
T ss_dssp CSCBCCSSTT----BCCBCSSCEEEEEE
T ss_pred CccCCccCcC----cccccCCCEEEEEE
Confidence 4444444344 45677788777553
No 306
>2ke9_A Caskin-2; SH3 domain, ANK repeat, cytoplasm, phosphoprotein, protein binding; NMR {Homo sapiens}
Probab=25.95 E-value=51 Score=18.63 Aligned_cols=25 Identities=16% Similarity=0.044 Sum_probs=16.1
Q ss_pred CCCCC-CCCCccccccccCCCCCCEEEEEC
Q psy12583 4 PLVDS-EGYPRQDVDVYQGLVKDDIILEFG 32 (96)
Q Consensus 4 ~~~~~-~~~pa~~~~~~aGLk~GD~Il~vn 32 (96)
+|.|. ...... +..|++||.|.-+.
T Consensus 23 Alydy~~a~~~~----eLsf~~GDiI~V~~ 48 (83)
T 2ke9_A 23 ALKDFWNLHDPT----ALNVRAGDVITVLE 48 (83)
T ss_dssp ESSCBCCCSCTT----BCCBCTTCEEEESC
T ss_pred EccccCCCCCCC----cccccCCCEEEEEE
Confidence 45555 333334 56799999988664
No 307
>2k2m_A EPS8-like protein 1; alternative splicing, coiled coil, cytoplasm, SH3 domain, signaling protein; NMR {Homo sapiens} PDB: 2rol_A
Probab=25.95 E-value=56 Score=17.39 Aligned_cols=25 Identities=8% Similarity=-0.003 Sum_probs=16.0
Q ss_pred CCCCCCCCCccccccccCCCCCCEEEEEC
Q psy12583 4 PLVDSEGYPRQDVDVYQGLVKDDIILEFG 32 (96)
Q Consensus 4 ~~~~~~~~pa~~~~~~aGLk~GD~Il~vn 32 (96)
+|.|....... +..+++||.|.-+.
T Consensus 13 alydy~~~~~~----eLs~~~Gd~i~v~~ 37 (68)
T 2k2m_A 13 CNYDFQARNSS----ELSVKQRDVLEVLD 37 (68)
T ss_dssp ESSCBCCCSSS----BCCBCTTCEEEEEE
T ss_pred ECccCCCCCCC----cccCCCCCEEEEEE
Confidence 34555554444 56688888887764
No 308
>1wi7_A SH3-domain kinase binding protein 1; beta barrel, SH3KBP1, RUK, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus}
Probab=25.88 E-value=48 Score=17.58 Aligned_cols=25 Identities=20% Similarity=-0.003 Sum_probs=16.1
Q ss_pred CCCCCCCCCccccccccCCCCCCEEEEEC
Q psy12583 4 PLVDSEGYPRQDVDVYQGLVKDDIILEFG 32 (96)
Q Consensus 4 ~~~~~~~~pa~~~~~~aGLk~GD~Il~vn 32 (96)
+|.|....... +..+++||.|.-+.
T Consensus 12 al~dy~~~~~~----eLs~~~Gd~i~v~~ 36 (68)
T 1wi7_A 12 VAFSYLPQNDD----ELELKVGDIIEVVG 36 (68)
T ss_dssp ESSCBCCSSTT----BCCBCTTCEECCCE
T ss_pred ECccCCcCCCC----CccCcCCCEEEEEE
Confidence 35555554445 56789999987543
No 309
>2dbm_A SH3-containing GRB2-like protein 2; EC 2.3.1.-, SH3 domain protein 2A, endophilin 1, EEN-B1, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2knb_B 3iql_A
Probab=25.82 E-value=53 Score=17.70 Aligned_cols=25 Identities=28% Similarity=0.183 Sum_probs=16.6
Q ss_pred CCCCCCCCCccccccccCCCCCCEEEEEC
Q psy12583 4 PLVDSEGYPRQDVDVYQGLVKDDIILEFG 32 (96)
Q Consensus 4 ~~~~~~~~pa~~~~~~aGLk~GD~Il~vn 32 (96)
+|.|....... +.-+++||.|.-+.
T Consensus 12 al~dy~~~~~~----eLs~~~Gd~i~v~~ 36 (73)
T 2dbm_A 12 ALYDFEPENEG----ELGFKEGDIITLTN 36 (73)
T ss_dssp ESSCBCCCSTT----CCCBCTTCEEECCB
T ss_pred EccccCCCCCC----CccCCCCCEEEEEE
Confidence 45555555455 56789999987654
No 310
>2cre_A HEF-like protein; SH3 domain, SRC homology 3 domain, beta barrel, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=25.80 E-value=43 Score=17.85 Aligned_cols=25 Identities=16% Similarity=0.105 Sum_probs=17.1
Q ss_pred CCCCCCCCCccccccccCCCCCCEEEEEC
Q psy12583 4 PLVDSEGYPRQDVDVYQGLVKDDIILEFG 32 (96)
Q Consensus 4 ~~~~~~~~pa~~~~~~aGLk~GD~Il~vn 32 (96)
+|.|....... +.-+++||.|.-+.
T Consensus 12 al~dy~~~~~~----eLs~~~Gd~i~v~~ 36 (71)
T 2cre_A 12 ALYDNCPDCSD----ELAFSRGDILTILE 36 (71)
T ss_dssp ESSCCCCSSSS----BCCCCSSCCEEEEE
T ss_pred ECcccCcCCCC----CCCCCCCCEEEEeE
Confidence 45555555455 56789999988765
No 311
>1u5s_A Cytoplasmic protein NCK2; protein-protein complex, beta barrel, beta sheet, zinc finger, metal binding protein; NMR {Homo sapiens} SCOP: b.34.2.1 PDB: 2fry_A
Probab=25.79 E-value=44 Score=17.84 Aligned_cols=25 Identities=8% Similarity=0.013 Sum_probs=17.2
Q ss_pred CCCCCCCCCccccccccCCCCCCEEEEEC
Q psy12583 4 PLVDSEGYPRQDVDVYQGLVKDDIILEFG 32 (96)
Q Consensus 4 ~~~~~~~~pa~~~~~~aGLk~GD~Il~vn 32 (96)
+|.|....... +..+++||.|.-+.
T Consensus 11 al~dy~~~~~~----eLs~~~Gd~i~v~~ 35 (71)
T 1u5s_A 11 TLYPFSSVTEE----ELNFEKGETMEVIE 35 (71)
T ss_dssp ESSCCCCCSSS----BCCCCSSCCEEEEE
T ss_pred EcccCCCCCCC----cccCCCCCEEEEEE
Confidence 45566655555 56789999988765
No 312
>1j3t_A Intersectin 2; beta barrel, SH3 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, endocytosis/exocytosis complex; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=25.65 E-value=56 Score=17.71 Aligned_cols=25 Identities=20% Similarity=0.155 Sum_probs=15.8
Q ss_pred CCCCCCCCCccccccccCCCCCCEEEEEC
Q psy12583 4 PLVDSEGYPRQDVDVYQGLVKDDIILEFG 32 (96)
Q Consensus 4 ~~~~~~~~pa~~~~~~aGLk~GD~Il~vn 32 (96)
+|.+....... +..+++||.|.-+.
T Consensus 15 al~dy~~~~~~----eLs~~~Gd~i~v~~ 39 (74)
T 1j3t_A 15 ALCSWTAKKDN----HLNFSKHDIITVLE 39 (74)
T ss_dssp ESSCBCCCSTT----BCCBCTTCEEEEEE
T ss_pred ECCCCCCCCCC----ccCCCCCCEEEEEe
Confidence 34555554444 56788899887664
No 313
>1x2q_A Signal transducing adapter molecule 2; SH3 domain, signal transducing adaptor molecule, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=25.60 E-value=56 Score=18.39 Aligned_cols=25 Identities=20% Similarity=0.232 Sum_probs=16.3
Q ss_pred CCCCCCCCCccccccccCCCCCCEEEEEC
Q psy12583 4 PLVDSEGYPRQDVDVYQGLVKDDIILEFG 32 (96)
Q Consensus 4 ~~~~~~~~pa~~~~~~aGLk~GD~Il~vn 32 (96)
+|.|....... +.-|+.||.|.-+.
T Consensus 22 Alydy~~~~~~----eLsf~~Gd~i~v~~ 46 (88)
T 1x2q_A 22 ALYDFEAVEDN----ELTFKHGEIIIVLD 46 (88)
T ss_dssp ESSCCCCCSSS----CCCCCSSCEEEEEE
T ss_pred EcccCCCCCcC----ccCCCCCCEEEEEE
Confidence 34555554445 56788888888765
No 314
>3ngp_A Spectrin alpha chain, brain; beta barrel, structural protein; 1.08A {Gallus gallus} PDB: 1e7o_A 1e6g_A 1e6h_A 1uue_A 1h8k_A 2lj3_A 1aey_A 1m8m_A 1shg_A 1u06_A 2nuz_A 2cdt_A 1hd3_A 2f2v_A 2f2w_A 2jm8_A 2jm9_A 2jma_A 3m0r_A 3m0p_A ...
Probab=25.58 E-value=74 Score=16.23 Aligned_cols=25 Identities=20% Similarity=0.155 Sum_probs=16.4
Q ss_pred CCCCCCCCCccccccccCCCCCCEEEEEC
Q psy12583 4 PLVDSEGYPRQDVDVYQGLVKDDIILEFG 32 (96)
Q Consensus 4 ~~~~~~~~pa~~~~~~aGLk~GD~Il~vn 32 (96)
+|.|....... +..+++||.|.-+.
T Consensus 11 al~dy~~~~~~----eLs~~~Gd~i~v~~ 35 (62)
T 3ngp_A 11 VLYDYQEKSPR----ELTVKKGDILTLLN 35 (62)
T ss_dssp ECSCBCCCSTT----BCCBCTTCEEEEEE
T ss_pred ECcCCCCCCCC----CccCCCCCEEEEeE
Confidence 34555554455 56788899888764
No 315
>2da9_A SH3-domain kinase binding protein 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=25.47 E-value=45 Score=17.82 Aligned_cols=25 Identities=12% Similarity=0.092 Sum_probs=16.7
Q ss_pred CCCCCCCCCccccccccCCCCCCEEEEEC
Q psy12583 4 PLVDSEGYPRQDVDVYQGLVKDDIILEFG 32 (96)
Q Consensus 4 ~~~~~~~~pa~~~~~~aGLk~GD~Il~vn 32 (96)
+|.|....... +.-+++||.|.-+.
T Consensus 12 al~dy~~~~~~----eLs~~~Gd~i~v~~ 36 (70)
T 2da9_A 12 VIFPYEAQNDD----ELTIKEGDIVTLIN 36 (70)
T ss_dssp ECSCCCCSSTT----BCCCCTTEEEEEEE
T ss_pred ECcCCCCCCcC----EeeEcCCCEEEEEE
Confidence 45555555455 56788999887764
No 316
>2pqh_A Spectrin alpha chain, brain; SH3 domain, chimera, , structural protein; 1.75A {Gallus gallus}
Probab=25.39 E-value=55 Score=18.07 Aligned_cols=25 Identities=20% Similarity=0.198 Sum_probs=18.0
Q ss_pred CCCCCCCCCccccccccCCCCCCEEEEEC
Q psy12583 4 PLVDSEGYPRQDVDVYQGLVKDDIILEFG 32 (96)
Q Consensus 4 ~~~~~~~~pa~~~~~~aGLk~GD~Il~vn 32 (96)
+|.|....... +.-+++||.|.-+.
T Consensus 7 al~dy~~~~~~----eLs~~~Gd~i~v~~ 31 (80)
T 2pqh_A 7 ALYDYQEKSPR----EVTMKKGDILTLLN 31 (80)
T ss_dssp ECSCBCCCSTT----BCCBCTTCEEEEEE
T ss_pred ECccCCCCCCC----ccCCCCCCEEEEEE
Confidence 45666665555 67789999998775
No 317
>1ujy_A RHO guanine nucleotide exchange factor 6; structural genomics, SH3 domain, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=25.29 E-value=47 Score=18.09 Aligned_cols=25 Identities=16% Similarity=0.070 Sum_probs=17.1
Q ss_pred CCCCCCCCCccccccccCCCCCCEEEEEC
Q psy12583 4 PLVDSEGYPRQDVDVYQGLVKDDIILEFG 32 (96)
Q Consensus 4 ~~~~~~~~pa~~~~~~aGLk~GD~Il~vn 32 (96)
+|.|....... +.-|++||.|.-+.
T Consensus 15 al~dy~~~~~~----eLs~~~Gd~i~v~~ 39 (76)
T 1ujy_A 15 ARFNFKQTNED----ELSVCKGDIIYVTR 39 (76)
T ss_dssp CCSCBCCSSTT----SCCBCSSCCEEESS
T ss_pred ECccCCcCCCC----cccCCCCCEEEEEE
Confidence 45566655455 56789999998654
No 318
>2i0n_A Class VII unconventional myosin; beta-sheet loop, structural protein; NMR {Dictyostelium discoideum}
Probab=25.09 E-value=42 Score=18.61 Aligned_cols=25 Identities=20% Similarity=0.052 Sum_probs=17.0
Q ss_pred CCCCCCCCCccccccccCCCCCCEEEEEC
Q psy12583 4 PLVDSEGYPRQDVDVYQGLVKDDIILEFG 32 (96)
Q Consensus 4 ~~~~~~~~pa~~~~~~aGLk~GD~Il~vn 32 (96)
+|.|....... +..++.||.|.-+.
T Consensus 15 alydy~~~~~~----eLsf~~Gd~i~v~~ 39 (80)
T 2i0n_A 15 ALKDYNVSDTS----LLPFKRNDIITITF 39 (80)
T ss_dssp ESSCBCCCSSS----SCCBCSSEEEEEEE
T ss_pred ECCCCCcCCCC----CcCCCCCCEEEEEE
Confidence 35566555455 56788999988765
No 319
>1neg_A Spectrin alpha chain, brain; SH3-domain fold, five antiparallel beta sheets, structural protein; 2.30A {Gallus gallus} SCOP: b.34.2.1
Probab=24.94 E-value=55 Score=18.55 Aligned_cols=25 Identities=20% Similarity=0.198 Sum_probs=17.6
Q ss_pred CCCCCCCCCccccccccCCCCCCEEEEEC
Q psy12583 4 PLVDSEGYPRQDVDVYQGLVKDDIILEFG 32 (96)
Q Consensus 4 ~~~~~~~~pa~~~~~~aGLk~GD~Il~vn 32 (96)
+|.|....... +..+++||.|.-+.
T Consensus 22 Alydy~a~~~~----eLsf~~Gd~i~Vl~ 46 (83)
T 1neg_A 22 ALYDYQEKSPR----EVTMKKGDILTLLN 46 (83)
T ss_dssp ESSCBCCSSTT----BCCBCTTCEEEEEE
T ss_pred EccccCCCCCC----ccccCCCCEEEEEE
Confidence 45566665555 57789999998765
No 320
>3thk_A Spectrin alpha chain, brain; SH3 domain, chimera, structural protein; 1.70A {Rattus norvegicus} SCOP: b.34.2.1
Probab=24.79 E-value=75 Score=16.92 Aligned_cols=25 Identities=20% Similarity=0.198 Sum_probs=18.0
Q ss_pred CCCCCCCCCccccccccCCCCCCEEEEEC
Q psy12583 4 PLVDSEGYPRQDVDVYQGLVKDDIILEFG 32 (96)
Q Consensus 4 ~~~~~~~~pa~~~~~~aGLk~GD~Il~vn 32 (96)
+|.|....... +..+++||.|.-+.
T Consensus 10 al~dy~~~~~~----eLs~~~Gd~i~v~~ 34 (73)
T 3thk_A 10 ALYDYQEKSPR----EVTMKKGDILTLLN 34 (73)
T ss_dssp ECSCBCCCSTT----BCCBCTTCEEEEEE
T ss_pred ECcCCCcCCCC----ccCCCCCCEEEEEE
Confidence 45666665555 67899999988765
No 321
>2e5k_A Suppressor of T-cell receptor signaling 1; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=24.41 E-value=56 Score=18.59 Aligned_cols=25 Identities=16% Similarity=0.012 Sum_probs=16.4
Q ss_pred CCCCCCCCCccccccccCCCCCCEEEEEC
Q psy12583 4 PLVDSEGYPRQDVDVYQGLVKDDIILEFG 32 (96)
Q Consensus 4 ~~~~~~~~pa~~~~~~aGLk~GD~Il~vn 32 (96)
+|.+......+ +..|++||.|.-+.
T Consensus 21 Alydy~~~~~~----eLs~~~Gd~i~v~~ 45 (94)
T 2e5k_A 21 VIYPYTPQNDD----ELELVPGDFIFMSP 45 (94)
T ss_dssp ECSCBCCSSSS----BCCBCTTCEEEECG
T ss_pred ECCcCCCCCCC----CcCCCCCCEEEEEE
Confidence 34455554445 56789999988764
No 322
>1i1j_A Melanoma derived growth regulatory protein; SH3 subdomain, hormone/growth factor complex; 1.39A {Homo sapiens} SCOP: b.34.2.1 PDB: 1k0x_A 1hjd_A
Probab=24.25 E-value=55 Score=19.68 Aligned_cols=25 Identities=12% Similarity=0.244 Sum_probs=17.6
Q ss_pred CCCCCCCCCccccccccCCCCCCEEEEEC
Q psy12583 4 PLVDSEGYPRQDVDVYQGLVKDDIILEFG 32 (96)
Q Consensus 4 ~~~~~~~~pa~~~~~~aGLk~GD~Il~vn 32 (96)
+|.|....... +..|++||.|.-+.
T Consensus 27 Alydy~a~~~~----ELsf~~GDiI~Vl~ 51 (108)
T 1i1j_A 27 ALQDYMAPDCR----FLTIHRGQVVYVFS 51 (108)
T ss_dssp ESSCBCCSSTT----BCCBCTTCEEEEEE
T ss_pred ECCccCCCCCC----ccccCCCCEEEEEE
Confidence 45566665555 67899999988764
No 323
>3jru_B Probable cytosol aminopeptidase; bacterial blight, XOO0834, PEPA, xanthomonas oryzae PV. ORYZ KACC10331, hydrolase, manganese; 2.60A {Xanthomonas oryzae PV}
Probab=23.99 E-value=21 Score=27.66 Aligned_cols=24 Identities=13% Similarity=0.015 Sum_probs=19.3
Q ss_pred CCCCCccccccccCCCCCCEEEEECCeec
Q psy12583 8 SEGYPRQDVDVYQGLVKDDIILEFGPINS 36 (96)
Q Consensus 8 ~~~~pa~~~~~~aGLk~GD~Il~vng~~~ 36 (96)
.||+|-. .| .++||.|.+.||+.+
T Consensus 315 ~ENm~sg----~A-~rPgDVit~~~G~TV 338 (490)
T 3jru_B 315 VENAIDG----NA-YRPSDVITSMSGKTI 338 (490)
T ss_dssp EEECCST----TC-CCTTCEEECTTSCEE
T ss_pred eccCCCC----CC-CCCCCEEEecCCcEE
Confidence 4677777 55 999999999999754
No 324
>2kxd_A 11-MER peptide, SH3 domain of spectrin alpha CHAI; alpha spectrin SH3 domain, SPC-S19P20S circular permutant, S protein; NMR {Synthetic}
Probab=23.95 E-value=68 Score=17.26 Aligned_cols=25 Identities=20% Similarity=0.205 Sum_probs=18.1
Q ss_pred CCCCCCCCCCccccccccCCCCCCEEEEEC
Q psy12583 3 EPLVDSEGYPRQDVDVYQGLVKDDIILEFG 32 (96)
Q Consensus 3 ~~~~~~~~~pa~~~~~~aGLk~GD~Il~vn 32 (96)
.+|.+.+. ... +..+++||.|.-+.
T Consensus 4 ~alydy~~-~~~----eLs~~~Gd~i~v~~ 28 (73)
T 2kxd_A 4 PPLPPYSA-GGR----EVTMKKGDILTLLN 28 (73)
T ss_dssp CCCCSSCC-CSC----CCCBCTTCEEEEEE
T ss_pred EEeeeeCC-CCC----EeeEcCCCEEEEEE
Confidence 35667765 445 57799999998775
No 325
>2yuo_A CIP85, RUN and TBC1 domain containing 3; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=23.91 E-value=60 Score=17.71 Aligned_cols=25 Identities=32% Similarity=0.349 Sum_probs=17.4
Q ss_pred CCCCCCCCCccccccccCCCCCCEEEEEC
Q psy12583 4 PLVDSEGYPRQDVDVYQGLVKDDIILEFG 32 (96)
Q Consensus 4 ~~~~~~~~pa~~~~~~aGLk~GD~Il~vn 32 (96)
+|.|....... +..+++||.|.-+.
T Consensus 12 al~dy~~~~~~----eLs~~~Gd~i~v~~ 36 (78)
T 2yuo_A 12 ALLDFERHDDD----ELGFRKNDIITIIS 36 (78)
T ss_dssp ESSCBCCSSTT----BCCBCTTCEEEEEE
T ss_pred ECccCCCCCCC----CccCCCCCEEEEEE
Confidence 45566555445 57799999998775
No 326
>1x43_A Endophilin B1, SH3 domain GRB2-like protein B1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=23.90 E-value=88 Score=17.17 Aligned_cols=25 Identities=24% Similarity=0.321 Sum_probs=15.7
Q ss_pred CCCCCCCCCccccccccCCCCCCEEEEEC
Q psy12583 4 PLVDSEGYPRQDVDVYQGLVKDDIILEFG 32 (96)
Q Consensus 4 ~~~~~~~~pa~~~~~~aGLk~GD~Il~vn 32 (96)
+|.|....... +.-+++||.|.-+.
T Consensus 22 al~dy~~~~~~----eLs~~~Gd~i~v~~ 46 (81)
T 1x43_A 22 VLYDYDAANST----ELSLLADEVITVFS 46 (81)
T ss_dssp ESSCCCCSSTT----BCCCCTTCEEEEEC
T ss_pred EcccCCCCCCC----cCCCCCCCEEEEEE
Confidence 34455544444 56688888887765
No 327
>2cud_A SRC-like-adapter; SH3 domain, negative mitogenesis regulator, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=23.87 E-value=63 Score=17.85 Aligned_cols=12 Identities=0% Similarity=-0.042 Sum_probs=6.7
Q ss_pred cCCCCCCEEEEE
Q psy12583 20 QGLVKDDIILEF 31 (96)
Q Consensus 20 aGLk~GD~Il~v 31 (96)
.-+++||.|.-+
T Consensus 34 Ls~~~Gd~i~v~ 45 (79)
T 2cud_A 34 PIFRRGEKLRVI 45 (79)
T ss_dssp CSSCTTCEEEEE
T ss_pred CCCCCCCEEEEE
Confidence 445666665554
No 328
>1x6b_A RHO guanine exchange factor (GEF) 16; SH3 domain, neuroblastoma, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=23.86 E-value=52 Score=18.14 Aligned_cols=13 Identities=23% Similarity=0.345 Sum_probs=7.8
Q ss_pred ccCCCCCCEEEEE
Q psy12583 19 YQGLVKDDIILEF 31 (96)
Q Consensus 19 ~aGLk~GD~Il~v 31 (96)
+.-|++||.|.-+
T Consensus 33 eLs~~~Gd~i~v~ 45 (79)
T 1x6b_A 33 EVTLQQADVVLVL 45 (79)
T ss_dssp BCCCCTTEEEEEE
T ss_pred CcCCCCCCEEEEE
Confidence 4456667766654
No 329
>2o2o_A SH3-domain kinase-binding protein 1; CIN85, protein binding; NMR {Homo sapiens}
Probab=23.80 E-value=58 Score=18.83 Aligned_cols=25 Identities=20% Similarity=-0.003 Sum_probs=17.2
Q ss_pred CCCCCCCCCccccccccCCCCCCEEEEEC
Q psy12583 4 PLVDSEGYPRQDVDVYQGLVKDDIILEFG 32 (96)
Q Consensus 4 ~~~~~~~~pa~~~~~~aGLk~GD~Il~vn 32 (96)
+|.|....... +..|++||.|.-+.
T Consensus 23 Alydy~a~~~~----eLsf~~Gd~i~V~~ 47 (92)
T 2o2o_A 23 VAFSYLPQNDD----ELELKVGDIIEVVG 47 (92)
T ss_dssp ECSCBCCCSSS----CCCBCSSCEEECCC
T ss_pred EccccCCCCCc----cccccCCCEEEEeE
Confidence 35556555555 57799999988664
No 330
>1x69_A Cortactin isoform A; SH3 domain, CTTN, oncogene EMS1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=23.79 E-value=66 Score=17.63 Aligned_cols=24 Identities=25% Similarity=0.227 Sum_probs=14.0
Q ss_pred CCCCCCCCccccccccCCCCCCEEEEEC
Q psy12583 5 LVDSEGYPRQDVDVYQGLVKDDIILEFG 32 (96)
Q Consensus 5 ~~~~~~~pa~~~~~~aGLk~GD~Il~vn 32 (96)
|.+....... +..+++||.|.-+.
T Consensus 23 l~dy~~~~~~----eLs~~~Gd~i~v~~ 46 (79)
T 1x69_A 23 LYDYQAAGDD----EISFDPDDIITNIE 46 (79)
T ss_dssp SSCCCCSSSS----BCCCCTTCEEEEEE
T ss_pred CccCCCCCCC----CcCcCCCCEEEEeE
Confidence 4444444344 45678888877653
No 331
>1x6g_A Megakaryocyte-associated tyrosine-protein kinase; MATK, CTK, HYL, SH3 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=23.69 E-value=56 Score=18.15 Aligned_cols=14 Identities=14% Similarity=0.183 Sum_probs=8.1
Q ss_pred ccCCCCCCEEEEEC
Q psy12583 19 YQGLVKDDIILEFG 32 (96)
Q Consensus 19 ~aGLk~GD~Il~vn 32 (96)
+.-+++||.|.-++
T Consensus 33 eLsf~~Gd~i~v~~ 46 (81)
T 1x6g_A 33 ELAFRKGDVVTILE 46 (81)
T ss_dssp CCCBCTTCEEEEEE
T ss_pred CCCCCCCCEEEEEe
Confidence 34566666666554
No 332
>2ega_A SH3 and PX domain-containing protein 2A; SH3 domain, KIAA0418 protein, SH3MD1, SH3 multiple domains 1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=23.68 E-value=46 Score=17.76 Aligned_cols=25 Identities=4% Similarity=-0.008 Sum_probs=16.4
Q ss_pred CCCCCCCCCccccccccCCCCCCEEEEEC
Q psy12583 4 PLVDSEGYPRQDVDVYQGLVKDDIILEFG 32 (96)
Q Consensus 4 ~~~~~~~~pa~~~~~~aGLk~GD~Il~vn 32 (96)
+|.|....... +..|++||.|.-+.
T Consensus 13 al~dy~~~~~~----eLs~~~Gd~i~v~~ 37 (70)
T 2ega_A 13 VVSNYKKQENS----ELSLQAGEVVDVIE 37 (70)
T ss_dssp CCSCCCCCSSS----SCCCCTTCBCEEEE
T ss_pred ECceECCCCCC----cccCCCCCEEEEEE
Confidence 45555555455 56788899887654
No 333
>3ij3_A Cytosol aminopeptidase; PEPB, peptidase M17 family, IDP01962 aminopeptidase, hydrolase, manganese, metal-binding, protea structural genomics; HET: PGE PG4; 1.80A {Coxiella burnetii}
Probab=23.67 E-value=22 Score=27.59 Aligned_cols=24 Identities=8% Similarity=-0.060 Sum_probs=19.1
Q ss_pred CCCCCccccccccCCCCCCEEEEECCeec
Q psy12583 8 SEGYPRQDVDVYQGLVKDDIILEFGPINS 36 (96)
Q Consensus 8 ~~~~pa~~~~~~aGLk~GD~Il~vng~~~ 36 (96)
.||+|.. .| .|+||.|.+.||+.+
T Consensus 303 ~ENm~sg----~A-~rPgDVits~~GkTV 326 (482)
T 3ij3_A 303 VENAIGS----RS-YRPGDVVQTRARKTI 326 (482)
T ss_dssp EEECCST----TC-CCTTCEEECTTSCEE
T ss_pred eccCCCC----CC-CCCCCEEEeCCCCEE
Confidence 3677777 55 899999999999763
No 334
>1yfb_A Transition state regulatory protein ABRB; , homodimer, bioinformatics, swapped-hairpin barrel, transcription; NMR {Bacillus subtilis} SCOP: b.129.1.3 PDB: 1ysf_A 2k1n_A* 1z0r_A 2ro4_A 2fy9_A 2ro3_A
Probab=23.49 E-value=27 Score=19.02 Aligned_cols=11 Identities=18% Similarity=0.353 Sum_probs=8.1
Q ss_pred ccCCCCCCEEE
Q psy12583 19 YQGLVKDDIIL 29 (96)
Q Consensus 19 ~aGLk~GD~Il 29 (96)
+.||++||.+.
T Consensus 33 ~Lgi~~Gd~l~ 43 (59)
T 1yfb_A 33 TLGIAEKDALE 43 (59)
T ss_dssp HTTCCTTCEEE
T ss_pred HcCCCCCCEEE
Confidence 56888888764
No 335
>3h0h_A Proto-oncogene tyrosine-protein kinase FYN; beta barrel, transferase; HET: PG4; 1.76A {Homo sapiens} SCOP: b.34.2.1 PDB: 3h0i_A 3h0f_A*
Probab=23.28 E-value=82 Score=16.75 Aligned_cols=24 Identities=17% Similarity=0.134 Sum_probs=14.1
Q ss_pred CCCCCCCCccccccccCCCCCCEEEEEC
Q psy12583 5 LVDSEGYPRQDVDVYQGLVKDDIILEFG 32 (96)
Q Consensus 5 ~~~~~~~pa~~~~~~aGLk~GD~Il~vn 32 (96)
|.|....... +..+++||.|.-+.
T Consensus 21 l~dy~~~~~~----eLs~~~Gd~i~v~~ 44 (73)
T 3h0h_A 21 LYDYEAITED----DLSFHKGEKFQILN 44 (73)
T ss_dssp SSCBCCSSTT----BCCBCTTCEEEEEE
T ss_pred CccCCCCCCC----cceEeCCCEEEEEE
Confidence 4444444444 55678888877654
No 336
>1ruw_A Myosin-3 isoform, MYO3; SH3 domain, yeast, high-throughput, structural genomics, contractIle protein; 1.80A {Saccharomyces cerevisiae} PDB: 2btt_A 1va7_A
Probab=23.26 E-value=64 Score=17.08 Aligned_cols=25 Identities=20% Similarity=0.045 Sum_probs=16.5
Q ss_pred CCCCCC-CCCccccccccCCCCCCEEEEEC
Q psy12583 4 PLVDSE-GYPRQDVDVYQGLVKDDIILEFG 32 (96)
Q Consensus 4 ~~~~~~-~~pa~~~~~~aGLk~GD~Il~vn 32 (96)
+|.|.. ..... +..|++||.|.-+.
T Consensus 7 alydy~~~~~~~----eLs~~~Gd~i~v~~ 32 (69)
T 1ruw_A 7 AAYDFPGSGSSS----ELPLKKGDIVFISR 32 (69)
T ss_dssp ESSCBCCCSCTT----BCCBCTTCEEEEEE
T ss_pred EccccCCCCCCC----cccCCCCCEEEEEE
Confidence 455663 44444 56789999988764
No 337
>4glm_A Dynamin-binding protein; SH3 domain, DNMBP, structural genomics, structural genomics consortium, SGC, SRC homology 3 domains, cell junctions; 1.90A {Homo sapiens}
Probab=23.15 E-value=85 Score=16.53 Aligned_cols=24 Identities=13% Similarity=-0.000 Sum_probs=15.0
Q ss_pred CCCCCCCCccccccccCCCCCCEEEEEC
Q psy12583 5 LVDSEGYPRQDVDVYQGLVKDDIILEFG 32 (96)
Q Consensus 5 ~~~~~~~pa~~~~~~aGLk~GD~Il~vn 32 (96)
|.|....... +.-+++||.|.-+.
T Consensus 19 l~dy~~~~~~----eLs~~~Gd~i~v~~ 42 (72)
T 4glm_A 19 LYRFQALEPN----ELDFEVGDKIRILA 42 (72)
T ss_dssp SSCBCCCSTT----BCCBCTTCEEEEEE
T ss_pred CccCCCCCCC----cCCCCCCCEEEEEE
Confidence 4455544444 56688888887653
No 338
>1lam_A Leucine aminopeptidase; exopeptidase, metallopeptidase, hydrolase (A aminoacylpeptide); 1.60A {Bos taurus} SCOP: c.56.5.3 c.50.1.1 PDB: 1lan_A 1lcp_A* 1lap_A 1bpn_A 1bpm_A 1bll_E* 2j9a_A* 2ewb_A*
Probab=23.02 E-value=18 Score=27.90 Aligned_cols=24 Identities=13% Similarity=0.054 Sum_probs=19.0
Q ss_pred CCCCCccccccccCCCCCCEEEEECCeec
Q psy12583 8 SEGYPRQDVDVYQGLVKDDIILEFGPINS 36 (96)
Q Consensus 8 ~~~~pa~~~~~~aGLk~GD~Il~vng~~~ 36 (96)
.||+|-. .| .||||.|.+.||+.+
T Consensus 303 ~ENm~sg----~A-~rPgDVits~~GkTV 326 (484)
T 1lam_A 303 CENMPSG----KA-NKPGDVVRARNGKTI 326 (484)
T ss_dssp EEECCST----TS-CCTTEEEECTTSCEE
T ss_pred eccCCCC----CC-CCCCCEEEeCCCcEE
Confidence 3677777 55 999999999999753
No 339
>3kzw_A Cytosol aminopeptidase; hydrolase, manganese binding, protease, structural genomics; 2.70A {Staphylococcus aureus subsp}
Probab=23.02 E-value=23 Score=27.71 Aligned_cols=24 Identities=13% Similarity=0.177 Sum_probs=19.2
Q ss_pred CCCCCccccccccCCCCCCEEEEECCeec
Q psy12583 8 SEGYPRQDVDVYQGLVKDDIILEFGPINS 36 (96)
Q Consensus 8 ~~~~pa~~~~~~aGLk~GD~Il~vng~~~ 36 (96)
.||+|.. .| .+|||.|.+.||+.+
T Consensus 336 ~ENm~sg----~A-~rPgDVits~~GkTV 359 (515)
T 3kzw_A 336 AENMINE----AS-MKPDDVFTALSGETV 359 (515)
T ss_dssp EEECCCT----TC-CCTTCEEECTTSCEE
T ss_pred eccCCCC----CC-CCCCCEEEeCCCCEE
Confidence 4677777 55 999999999999754
No 340
>1s1n_A Nephrocystin 1; beta barrel, cell adhesion; NMR {Homo sapiens}
Probab=22.97 E-value=49 Score=17.49 Aligned_cols=25 Identities=16% Similarity=0.084 Sum_probs=16.1
Q ss_pred CCCCCCCCCccccccccCCCCCCEEEEEC
Q psy12583 4 PLVDSEGYPRQDVDVYQGLVKDDIILEFG 32 (96)
Q Consensus 4 ~~~~~~~~pa~~~~~~aGLk~GD~Il~vn 32 (96)
+|.|....... +.-+++||.|.-+.
T Consensus 15 al~dy~~~~~~----eLs~~~Gd~i~v~~ 39 (68)
T 1s1n_A 15 AVGDFTAQQVG----DLTFKKGEILLVIE 39 (68)
T ss_dssp ECSCBCCSSSS----CCCBCSSEEEEECS
T ss_pred EcccCCCCCCC----cCCCCCCCEEEEEE
Confidence 35555554445 56688899887654
No 341
>2ysq_A RHO guanine nucleotide exchange factor 9; SH3 domain, CDC42 guanine nucleotide exchange factor (GEF) 9, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=22.92 E-value=67 Score=17.69 Aligned_cols=25 Identities=12% Similarity=0.122 Sum_probs=16.6
Q ss_pred CCCCCCCCCccccccccCCCCCCEEEEEC
Q psy12583 4 PLVDSEGYPRQDVDVYQGLVKDDIILEFG 32 (96)
Q Consensus 4 ~~~~~~~~pa~~~~~~aGLk~GD~Il~vn 32 (96)
+|.|....... +..+++||.|.-+.
T Consensus 15 al~dy~~~~~~----eLs~~~Gd~i~v~~ 39 (81)
T 2ysq_A 15 AVWDHVTMANR----ELAFKAGDVIKVLD 39 (81)
T ss_dssp ESSCCCCSSSS----SCCCCTTCEEEEEE
T ss_pred EeeeECCCCCC----cCCCCCCCEEEEEE
Confidence 35555554444 56789999988765
No 342
>1uff_A Intersectin 2; beta barrel, SH3 domain, endocytosis, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.34.2.1
Probab=22.82 E-value=64 Score=18.40 Aligned_cols=25 Identities=20% Similarity=0.045 Sum_probs=18.1
Q ss_pred CCCCCCCCCccccccccCCCCCCEEEEEC
Q psy12583 4 PLVDSEGYPRQDVDVYQGLVKDDIILEFG 32 (96)
Q Consensus 4 ~~~~~~~~pa~~~~~~aGLk~GD~Il~vn 32 (96)
+|.|......+ +..|+.||.|.-+.
T Consensus 10 Alydy~a~~~~----eLsf~~Gd~i~v~~ 34 (93)
T 1uff_A 10 ALYPFEARNHD----EMSFNSGDIIQVDE 34 (93)
T ss_dssp ESSCBCCCSSS----CCCBCTTCEEEECS
T ss_pred ECccCCCCCCC----CcCCCCCCEEEEeE
Confidence 45666665556 67799999988764
No 343
>2oi3_A Tyrosine-protein kinase HCK; human HCK, SH3, SRC-type tyrosine kinase, transferase; NMR {Homo sapiens} PDB: 2oj2_A 4hck_A 5hck_A
Probab=22.60 E-value=68 Score=17.75 Aligned_cols=13 Identities=15% Similarity=0.181 Sum_probs=7.1
Q ss_pred ccCCCCCCEEEEE
Q psy12583 19 YQGLVKDDIILEF 31 (96)
Q Consensus 19 ~aGLk~GD~Il~v 31 (96)
+..+++||.|.-+
T Consensus 41 eLs~~~Gd~i~v~ 53 (86)
T 2oi3_A 41 DLSFQKGDQMVVL 53 (86)
T ss_dssp CCCCCTTCEEEEE
T ss_pred cCcCCCCCEEEEE
Confidence 3445666665544
No 344
>4ag1_C Fynomer; hydrolase-de novo protein complex, inhibitor, serine proteas; 1.40A {Synthetic construct} PDB: 4afz_C 4ag2_C* 4afq_C* 4afs_C 4afu_C 1azg_B 1nyf_A 1nyg_A 1a0n_B 3ua7_A 3ua6_A 1fyn_A 1m27_C* 1shf_A 1zbj_A 1efn_A 1avz_C 1nlo_C* 1nlp_C* 1qwe_A ...
Probab=22.37 E-value=81 Score=17.66 Aligned_cols=25 Identities=12% Similarity=0.013 Sum_probs=18.0
Q ss_pred CCCCCCCCCccccccccCCCCCCEEEEEC
Q psy12583 4 PLVDSEGYPRQDVDVYQGLVKDDIILEFG 32 (96)
Q Consensus 4 ~~~~~~~~pa~~~~~~aGLk~GD~Il~vn 32 (96)
+|.|....... +..+++||.|.-+.
T Consensus 11 Alydy~a~~~~----eLsf~~Gd~i~vl~ 35 (84)
T 4ag1_C 11 ALYDYNATRWT----DLSFHKGEKFQILE 35 (84)
T ss_dssp ESSCBCCSBTT----BCCBCTTCEEEEEE
T ss_pred EcccCCCCCCC----cccccCCCEEEEEE
Confidence 45566665556 67899999998765
No 345
>1z9q_A Neutrophil cytosol factor 4; oxidoreductase activator; NMR {Homo sapiens}
Probab=22.33 E-value=36 Score=19.23 Aligned_cols=25 Identities=20% Similarity=0.300 Sum_probs=17.1
Q ss_pred CCCCCCCCCccccccccCCCCCCEEEEEC
Q psy12583 4 PLVDSEGYPRQDVDVYQGLVKDDIILEFG 32 (96)
Q Consensus 4 ~~~~~~~~pa~~~~~~aGLk~GD~Il~vn 32 (96)
+|.|....... +..+++||.|.-+.
T Consensus 23 Alydy~a~~~~----eLsf~~Gd~I~Vl~ 47 (79)
T 1z9q_A 23 ALFDFTGNSKL----ELNFKAGDVIFLLS 47 (79)
T ss_dssp ESSCCCCSSTT----BCCCCTTCCBCCCE
T ss_pred EcCccCCCCCC----cccccCCCEEEEeE
Confidence 45666665555 67789999887543
No 346
>2ct3_A Vinexin; SH3 domian, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=22.30 E-value=53 Score=17.41 Aligned_cols=24 Identities=8% Similarity=-0.046 Sum_probs=14.6
Q ss_pred CCCCCCCCccccccccCCCCCCEEEEEC
Q psy12583 5 LVDSEGYPRQDVDVYQGLVKDDIILEFG 32 (96)
Q Consensus 5 ~~~~~~~pa~~~~~~aGLk~GD~Il~vn 32 (96)
|.+....... +.-|++||.|.-+.
T Consensus 13 l~dy~~~~~~----eLs~~~Gd~i~v~~ 36 (70)
T 2ct3_A 13 MYQYRPQNED----ELELREGDRVDVMQ 36 (70)
T ss_dssp SSCBCCSSTT----BCCBCTTEEEEEEE
T ss_pred CccCCcCCcC----CccCCCCCEEEEEE
Confidence 4455544444 56688888877654
No 347
>3o5z_A Phosphatidylinositol 3-kinase regulatory subunit; SRC homology 3 domain, protein binding; 2.01A {Homo sapiens} SCOP: b.34.2.0 PDB: 2kt1_A
Probab=22.26 E-value=67 Score=18.29 Aligned_cols=24 Identities=13% Similarity=0.059 Sum_probs=15.9
Q ss_pred CCCCCCCCCccccccccCCCCCCEEEEE
Q psy12583 4 PLVDSEGYPRQDVDVYQGLVKDDIILEF 31 (96)
Q Consensus 4 ~~~~~~~~pa~~~~~~aGLk~GD~Il~v 31 (96)
+|.|....-.. +..|++||.|.-+
T Consensus 16 Alydy~a~~~~----ELsf~~GD~I~V~ 39 (90)
T 3o5z_A 16 ALYPFRRERPE----DLELLPGDVLVVS 39 (90)
T ss_dssp ECSCBCCCSTT----BCCBCTTCEEEEE
T ss_pred EeeeECCCCCC----ccCCcCCCEEEEE
Confidence 34455544444 5779999999865
No 348
>3kr4_A M17 leucyl aminopeptidase; protease, hydrolase; HET: BES 1PE; 2.00A {Plasmodium falciparum} PDB: 3kqz_A* 3kqx_A* 3kr5_A* 3t8w_A*
Probab=22.22 E-value=24 Score=27.65 Aligned_cols=24 Identities=17% Similarity=0.054 Sum_probs=19.2
Q ss_pred CCCCCccccccccCCCCCCEEEEECCeec
Q psy12583 8 SEGYPRQDVDVYQGLVKDDIILEFGPINS 36 (96)
Q Consensus 8 ~~~~pa~~~~~~aGLk~GD~Il~vng~~~ 36 (96)
.||+|.. .| .|+||.|.+.||+.+
T Consensus 347 ~ENm~sg----~A-~rPgDVit~~~GkTV 370 (528)
T 3kr4_A 347 CENMVSK----NS-YRPGDIITASNGKTI 370 (528)
T ss_dssp EEECCST----TS-CCTTCEEECTTSCEE
T ss_pred eccCCCC----CC-CCCCCEEEeCCCcEE
Confidence 3677777 55 999999999999763
No 349
>3pei_A Cytosol aminopeptidase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta sandwich; HET: MSE; 2.70A {Francisella tularensis subsp}
Probab=22.06 E-value=20 Score=27.78 Aligned_cols=24 Identities=13% Similarity=0.108 Sum_probs=15.3
Q ss_pred CCCCCccccccccCCCCCCEEEEECCeec
Q psy12583 8 SEGYPRQDVDVYQGLVKDDIILEFGPINS 36 (96)
Q Consensus 8 ~~~~pa~~~~~~aGLk~GD~Il~vng~~~ 36 (96)
.||+|.. .| .+|||.|.+.||+.+
T Consensus 304 ~ENm~sg----~A-~rPgDVits~~G~TV 327 (486)
T 3pei_A 304 AENAVDA----RS-YRPGDVLKSMKGITV 327 (486)
T ss_dssp EEC-----------CCTTEEEECTTCCEE
T ss_pred eccCCCC----CC-CCCCCEEEeCCCcEE
Confidence 4677777 55 999999999999754
No 350
>2qcp_X Cation efflux system protein CUSF; silver-binding, copper-binding, beta barrel, OB-fold, metall metal resistance, metal-binding; 1.00A {Escherichia coli str} PDB: 1zeq_X 3e6z_X
Probab=21.71 E-value=40 Score=19.32 Aligned_cols=11 Identities=9% Similarity=0.153 Sum_probs=7.3
Q ss_pred ccCCCCCCEEE
Q psy12583 19 YQGLVKDDIIL 29 (96)
Q Consensus 19 ~aGLk~GD~Il 29 (96)
-.||++||+|-
T Consensus 51 l~~lk~Gd~V~ 61 (80)
T 2qcp_X 51 MSEIKTGDKVA 61 (80)
T ss_dssp ECCCCTTCEEE
T ss_pred hhcCCCCCEEE
Confidence 34677777765
No 351
>2egc_A SH3 and PX domain-containing protein 2A; SH3 domain, KIAA0418 protein, SH3MD1, SH3 multiple domains 1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=21.69 E-value=66 Score=17.50 Aligned_cols=24 Identities=17% Similarity=0.227 Sum_probs=14.8
Q ss_pred CCCCCCCCCccccccccCCCCCCEEEEEC
Q psy12583 4 PLVDSEGYPRQDVDVYQGLVKDDIILEFG 32 (96)
Q Consensus 4 ~~~~~~~~pa~~~~~~aGLk~GD~Il~vn 32 (96)
+|.|.... .. +.-|++||.|.-+.
T Consensus 15 alydy~~~-~~----eLs~~~Gd~i~vl~ 38 (75)
T 2egc_A 15 SIADYEGD-EE----TAGFQEGVSMEVLE 38 (75)
T ss_dssp ECSCBCCC-SS----SCCBCTTCEEEECE
T ss_pred ECCCcCCC-CC----cCCCCCCCEEEEEE
Confidence 34555554 44 56688888877553
No 352
>3reb_B Tyrosine-protein kinase HCK; HIV-1 NEF, SH3 domain binding, signaling, HCK SH3 domain, PR binding; 3.45A {Homo sapiens}
Probab=21.58 E-value=88 Score=17.51 Aligned_cols=25 Identities=16% Similarity=0.205 Sum_probs=18.6
Q ss_pred CCCCCCCCCccccccccCCCCCCEEEEEC
Q psy12583 4 PLVDSEGYPRQDVDVYQGLVKDDIILEFG 32 (96)
Q Consensus 4 ~~~~~~~~pa~~~~~~aGLk~GD~Il~vn 32 (96)
+|.|....... +..+++||.|.-+.
T Consensus 8 Alydy~~~~~~----eLs~~~Gd~i~v~~ 32 (90)
T 3reb_B 8 ALYDYVSWSPD----DLSFQKGDQMVVLE 32 (90)
T ss_dssp ESSCBCCSSTT----BCCBCTTCEEEEEE
T ss_pred ECCccCcCCcC----cCCCCCCCEEEEEE
Confidence 46666666566 67899999998765
No 353
>2hc9_A Leucine aminopeptidase 1; carbonate, structural genomics, P protein structure initiative, NEW YORK SGX research center structural genomics; 1.85A {Caenorhabditis elegans} PDB: 2hb6_A
Probab=21.47 E-value=26 Score=27.22 Aligned_cols=24 Identities=21% Similarity=0.068 Sum_probs=19.0
Q ss_pred CCCCCccccccccCCCCCCEEEEECCeec
Q psy12583 8 SEGYPRQDVDVYQGLVKDDIILEFGPINS 36 (96)
Q Consensus 8 ~~~~pa~~~~~~aGLk~GD~Il~vng~~~ 36 (96)
.||+|.. .| .++||.|.+.||+.+
T Consensus 305 ~ENm~sg----~A-~rPgDVits~~GkTV 328 (491)
T 2hc9_A 305 VENNVSP----IA-NKPDDIIKMLSGKTV 328 (491)
T ss_dssp EEECCST----TS-CCTTCEEECTTSCEE
T ss_pred eecCCCC----CC-CCCCCEEEeCCCcEE
Confidence 3567766 55 999999999999754
No 354
>3ne5_B Cation efflux system protein CUSB; transmembrane helix, metal transport; 2.90A {Escherichia coli} PDB: 3ooc_A 3opo_A 3ow7_A 4dnt_B 4dop_B 3h9i_A 3h94_A 3h9t_B 3t53_B 3t51_B 3t56_B
Probab=21.30 E-value=37 Score=24.89 Aligned_cols=16 Identities=19% Similarity=0.405 Sum_probs=12.9
Q ss_pred cccCCCCCCEEEEECC
Q psy12583 18 VYQGLVKDDIILEFGP 33 (96)
Q Consensus 18 ~~aGLk~GD~Il~vng 33 (96)
|..||++||+|+.=+.
T Consensus 367 V~~GL~~Gd~VV~~g~ 382 (413)
T 3ne5_B 367 LRSGLAEGEKVVSSGL 382 (413)
T ss_dssp EEESSCTTCEEECCST
T ss_pred EeCCCCCCCEEEECCh
Confidence 5679999999997554
No 355
>2d8h_A SH3YL1 protein; SH3 domain, hypothetical protein SH3YL1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=21.28 E-value=44 Score=18.41 Aligned_cols=14 Identities=14% Similarity=0.019 Sum_probs=9.4
Q ss_pred ccCCCCCCEEEEEC
Q psy12583 19 YQGLVKDDIILEFG 32 (96)
Q Consensus 19 ~aGLk~GD~Il~vn 32 (96)
+..|++||.|.-+.
T Consensus 33 eLsf~~Gd~i~v~~ 46 (80)
T 2d8h_A 33 DLNFQAGDRITVIS 46 (80)
T ss_dssp BCEECTTCEEEEEE
T ss_pred eeeEcCCCEEEEeE
Confidence 45577777777654
No 356
>3h8g_F Cytosol aminopeptidase; hydrolase, manganese, metal-binding, proteas; HET: BES; 1.50A {Pseudomonas putida} PDB: 3h8e_A 3h8f_A*
Probab=21.15 E-value=21 Score=27.70 Aligned_cols=24 Identities=17% Similarity=0.165 Sum_probs=19.1
Q ss_pred CCCCCccccccccCCCCCCEEEEECCeec
Q psy12583 8 SEGYPRQDVDVYQGLVKDDIILEFGPINS 36 (96)
Q Consensus 8 ~~~~pa~~~~~~aGLk~GD~Il~vng~~~ 36 (96)
.||+|-. .| .++||.|.+.||+.+
T Consensus 320 ~ENm~~g----~A-~rPgDVit~~~G~TV 343 (497)
T 3h8g_F 320 AENMPSG----GA-TRPGDIVTTMSGQTV 343 (497)
T ss_dssp EEECCST----TS-CCTTEEEECTTSCEE
T ss_pred eccCCCC----CC-CCCCCEEEeCCCcEE
Confidence 3677777 55 999999999999753
No 357
>2yun_A Nostrin; nitric oxide synthase trafficker, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=21.10 E-value=74 Score=17.36 Aligned_cols=25 Identities=20% Similarity=0.191 Sum_probs=16.3
Q ss_pred CCCCCCCCCccccccccCCCCCCEEEEEC
Q psy12583 4 PLVDSEGYPRQDVDVYQGLVKDDIILEFG 32 (96)
Q Consensus 4 ~~~~~~~~pa~~~~~~aGLk~GD~Il~vn 32 (96)
+|.+....... +..|++||.|.-+.
T Consensus 12 al~dy~~~~~~----eLs~~~Gd~i~v~~ 36 (79)
T 2yun_A 12 ALYSFQARQDD----ELNLEKGDIVIIHE 36 (79)
T ss_dssp ESSCBCCSSTT----BCCBCTTCEEEEEE
T ss_pred ECccCCcCCCC----CcCCCCCCEEEEEE
Confidence 35555554444 56789999987654
No 358
>2ege_A Uncharacterized protein KIAA1666; SH3 domain, KIAA1666 protein, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=20.90 E-value=1e+02 Score=16.69 Aligned_cols=14 Identities=21% Similarity=0.532 Sum_probs=11.4
Q ss_pred ccCCCCCCEEEEEC
Q psy12583 19 YQGLVKDDIILEFG 32 (96)
Q Consensus 19 ~aGLk~GD~Il~vn 32 (96)
+.-+++||.|.-+.
T Consensus 30 eLsf~~Gd~i~v~~ 43 (75)
T 2ege_A 30 RLALRAGDVVMVYG 43 (75)
T ss_dssp BCCBCTTCEEEEES
T ss_pred cceECCCCEEEEeE
Confidence 56789999998775
No 359
>1wx6_A Cytoplasmic protein NCK2; SH3 domain, structural genomics, signal transduction, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens}
Probab=20.80 E-value=80 Score=17.74 Aligned_cols=24 Identities=8% Similarity=0.012 Sum_probs=15.4
Q ss_pred CCCCCCCCccccccccCCCCCCEEEEEC
Q psy12583 5 LVDSEGYPRQDVDVYQGLVKDDIILEFG 32 (96)
Q Consensus 5 ~~~~~~~pa~~~~~~aGLk~GD~Il~vn 32 (96)
|.|....... +..|++||.|.-+.
T Consensus 23 lydy~~~~~~----eLs~~~Gd~i~v~~ 46 (91)
T 1wx6_A 23 LYPFSSVTEE----ELNFEKGETMEVIE 46 (91)
T ss_dssp SSCCCCSSSS----BCCCCTTCEEEEEE
T ss_pred eecCCcCCCC----cccCCCCCEEEEEE
Confidence 4455444444 56788899888765
No 360
>1awj_A ITK; transferase, regulatory intramolecular complex, kinase; NMR {Mus musculus} SCOP: b.34.2.1 PDB: 2rn8_A 2rna_A 2k79_A 2k7a_A
Probab=20.74 E-value=51 Score=18.03 Aligned_cols=25 Identities=20% Similarity=0.069 Sum_probs=16.2
Q ss_pred CCCCCCCCCccccccccCCCCCCEEEEEC
Q psy12583 4 PLVDSEGYPRQDVDVYQGLVKDDIILEFG 32 (96)
Q Consensus 4 ~~~~~~~~pa~~~~~~aGLk~GD~Il~vn 32 (96)
+|.|....-.. +..++.||.|.-++
T Consensus 25 alydy~~~~~~----eLs~~~Gd~i~v~~ 49 (77)
T 1awj_A 25 ALYDYQTNDPQ----ELALRCDEEYYLLD 49 (77)
T ss_dssp CCCCBCCCCTT----SCCBCSSSCCSCCC
T ss_pred ECccCCCCCcC----CcCCCCCCEEEEEE
Confidence 45555554444 56788899887664
No 361
>4efd_A Aminopeptidase; structural genomics, structural genomics consortium, SGC, hydrolase; 2.45A {Trypanosoma brucei brucei}
Probab=20.73 E-value=26 Score=27.45 Aligned_cols=24 Identities=21% Similarity=0.087 Sum_probs=18.6
Q ss_pred CCCCCccccccccCCCCCCEEEEECCeec
Q psy12583 8 SEGYPRQDVDVYQGLVKDDIILEFGPINS 36 (96)
Q Consensus 8 ~~~~pa~~~~~~aGLk~GD~Il~vng~~~ 36 (96)
.||+|.. .| .++||.|.+.||+.+
T Consensus 343 ~ENm~sg----~A-~rPgDVits~~GkTV 366 (522)
T 4efd_A 343 AENAIGP----KS-YRNDDIIVMKSGKTV 366 (522)
T ss_dssp EECCC-C----CS-TTTTEEEECTTSCEE
T ss_pred eccCCCC----CC-CCCCCEEEecCCcEE
Confidence 3677777 55 999999999999753
No 362
>2ecz_A Sorbin and SH3 domain-containing protein 1; glycoprotein, membrane, nuclear protein, phosphorylation, polymorphism, transport, structural genomics; NMR {Homo sapiens}
Probab=20.63 E-value=49 Score=17.59 Aligned_cols=25 Identities=12% Similarity=0.052 Sum_probs=14.8
Q ss_pred CCCCCCCCCccccccccCCCCCCEEEEEC
Q psy12583 4 PLVDSEGYPRQDVDVYQGLVKDDIILEFG 32 (96)
Q Consensus 4 ~~~~~~~~pa~~~~~~aGLk~GD~Il~vn 32 (96)
+|.|....-.. +..+++||.|.-+.
T Consensus 12 al~dy~~~~~~----eLs~~~Gd~i~v~~ 36 (70)
T 2ecz_A 12 AKFNFNGDTQV----EMSFRKGERITLLR 36 (70)
T ss_dssp ESSCCCCCSTT----BCCCCTTCBCEEEE
T ss_pred ECccCCCCCcC----CcCCCCCCEEEEEE
Confidence 34455444344 45678888877654
No 363
>3fpp_A Macrolide-specific efflux protein MACA; hexameric assembly, membrane fusion protein, drug efflux pump, periplasmic protein; 2.99A {Escherichia coli}
Probab=20.57 E-value=21 Score=25.04 Aligned_cols=14 Identities=21% Similarity=0.449 Sum_probs=0.0
Q ss_pred ccccCCCCCCEEEE
Q psy12583 17 DVYQGLVKDDIILE 30 (96)
Q Consensus 17 ~~~aGLk~GD~Il~ 30 (96)
-|..||++||+|+-
T Consensus 319 ~I~~GL~~Gd~VV~ 332 (341)
T 3fpp_A 319 EIVKGLEAGDEVVI 332 (341)
T ss_dssp --------------
T ss_pred EEecCCCCCCEEEE
Confidence 35679999999985
No 364
>2dl5_A KIAA0769 protein; SH3 domain, FCHSD2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=20.51 E-value=60 Score=17.80 Aligned_cols=24 Identities=0% Similarity=0.004 Sum_probs=15.4
Q ss_pred CCCCCCCCccccccccCCCCCCEEEEEC
Q psy12583 5 LVDSEGYPRQDVDVYQGLVKDDIILEFG 32 (96)
Q Consensus 5 ~~~~~~~pa~~~~~~aGLk~GD~Il~vn 32 (96)
|.|....... +..+++||.|.-+.
T Consensus 19 lydy~~~~~~----eLs~~~Gd~i~v~~ 42 (78)
T 2dl5_A 19 VYSYKASQPD----ELTIEEHEVLEVIE 42 (78)
T ss_dssp CSCBCCCSTT----BCCBCSSEEEEEEE
T ss_pred ceeECCCCCC----CCCCCCCCEEEEEe
Confidence 4555554444 56688888887664
No 365
>1at0_A 17-hedgehog; developmental signaling molecule, cholesterol transfer, signaling protein; 1.90A {Drosophila melanogaster} SCOP: b.86.1.1
Probab=20.26 E-value=54 Score=20.59 Aligned_cols=12 Identities=25% Similarity=0.288 Sum_probs=10.9
Q ss_pred CCCCCCEEEEEC
Q psy12583 21 GLVKDDIILEFG 32 (96)
Q Consensus 21 GLk~GD~Il~vn 32 (96)
-|++||++++.|
T Consensus 20 eL~~GD~Vla~d 31 (145)
T 1at0_A 20 ELSIGDRVLSMT 31 (145)
T ss_dssp GCCTTCEEEEEC
T ss_pred HcCCCCEEEEEC
Confidence 489999999998
No 366
>2ekh_A SH3 and PX domain-containing protein 2A; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=20.00 E-value=76 Score=17.47 Aligned_cols=25 Identities=0% Similarity=-0.190 Sum_probs=16.1
Q ss_pred CCCCCCCCCccccccccCCCCCCEEEEEC
Q psy12583 4 PLVDSEGYPRQDVDVYQGLVKDDIILEFG 32 (96)
Q Consensus 4 ~~~~~~~~pa~~~~~~aGLk~GD~Il~vn 32 (96)
+|.+....... +.-|++||.|.-+.
T Consensus 13 al~dy~~~~~~----eLs~~~Gd~i~vl~ 37 (80)
T 2ekh_A 13 TCSAYQKVQDS----EISFPAGVEVQVLE 37 (80)
T ss_dssp ECSCBCCSSTT----SCCBCTTCEEEEEE
T ss_pred ECCCCCCCCCC----ccCcCCCCEEEEEE
Confidence 34555555455 56788899887653
Done!