RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy12584
(94 letters)
>d1iv8a2 c.1.8.1 (A:1-653) Maltooligosyl trehalose synthase
{Archaeon Sulfolobus acidocaldarius [TaxId: 2285]}
Length = 653
Score = 57.6 bits (139), Expect = 6e-12
Identities = 10/90 (11%), Positives = 26/90 (28%), Gaps = 2/90 (2%)
Query: 1 IHLLLSFSPDYSSTKHE-FFQKSVKKEEPYTNYYVWAPPKGYSSDGT-PLAPNNWLSKEG 58
+ ++ P++ + + V K + YY + P+ + +
Sbjct: 80 LGIIQDIVPNHMAVNSLNWRLMDVLKMGKKSKYYTYFDFFPEDDKIRLPILGEDLDTVIS 139
Query: 59 GSAWEWNAERKEFYLHQFGKNQADFNFNNP 88
+ + E++L F N
Sbjct: 140 KGLLKIVKDGDEYFLEYFKWKLPLTEVGND 169
>d1gjwa2 c.1.8.1 (A:1-572) Maltosyltransferase {Thermotoga maritima
[TaxId: 2336]}
Length = 572
Score = 45.8 bits (107), Expect = 8e-08
Identities = 16/94 (17%), Positives = 30/94 (31%), Gaps = 8/94 (8%)
Query: 1 IHLLLSFSPDYSSTKHEFFQKSVKKEEPYTNYYVWAPPKGYSSDGTPLAPNNWLSKEGGS 60
I ++L F P ++ + ++ + +++ W + + D TP K
Sbjct: 196 IRVILDFIPRTAARDSDLIRE-------HPDWFYWIKVEELA-DYTPPRAEELPFKVPDE 247
Query: 61 AWEWNAERKEFYLHQFGKNQADFNFNNPQVVEYF 94
KE K N +PQ E
Sbjct: 248 DELEIIYNKENVKRHLKKFTLPPNLIDPQKWEKI 281
>d1m53a2 c.1.8.1 (A:43-520) Isomaltulose synthase PalI {Klebsiella
sp., lx3 [TaxId: 576]}
Length = 478
Score = 40.0 bits (92), Expect = 8e-06
Identities = 33/95 (34%), Positives = 53/95 (55%), Gaps = 7/95 (7%)
Query: 1 IHLLLSFSPDYSSTKHEFFQKSVK-KEEPYTNYYVWAPPKGYSSDGTPLAPNNWLSKEGG 59
+ L++ +++S +H +F +S K PY +YY W K PNN+ S GG
Sbjct: 93 MRLMIDVVINHTSDQHPWFIQSKSDKNNPYRDYYFWRDGKDNQP------PNNYPSFFGG 146
Query: 60 SAWEWNAERKEFYLHQFGKNQADFNFNNPQVVEYF 94
SAW+ +A+ ++YLH F + Q D N++NP+V E
Sbjct: 147 SAWQKDAKSGQYYLHYFARQQPDLNWDNPKVREDL 181
>d1hx0a2 c.1.8.1 (A:1-403) Animal alpha-amylase {Pig (Sus scrofa)
[TaxId: 9823]}
Length = 403
Score = 34.5 bits (78), Expect = 8e-04
Identities = 7/94 (7%), Positives = 15/94 (15%), Gaps = 5/94 (5%)
Query: 1 IHLLLSFSPDYSSTKHEFFQKSVKKEEPYTNYYVWAPPKGYSSDGTPLAPNNWLSKEGGS 60
+ + + ++ P YS+ N + S
Sbjct: 91 VRIYVDAVINHMCGSGAAAGTGTTCGSYCNPGNREFPAVPYSAW-----DFNDGKCKTAS 145
Query: 61 AWEWNAERKEFYLHQFGKNQADFNFNNPQVVEYF 94
+ D V
Sbjct: 146 GGIESYNDPYQVRDCQLVGLLDLALEKDYVRSMI 179
>d2d3na2 c.1.8.1 (A:5-398) Bacterial alpha-amylase {Bacillus sp. 707
[TaxId: 1416]}
Length = 394
Score = 28.4 bits (62), Expect = 0.097
Identities = 16/88 (18%), Positives = 30/88 (34%), Gaps = 1/88 (1%)
Query: 7 FSPDYSSTKHEFFQKSVKKEEPYTNYYVWAPPKGYSSDGTPLAPNNWLSKEGGSAWEWNA 66
+ +Y+ F + + + W G D + NN + K G W+
Sbjct: 127 VTGEYTIEAWTRFDFPGRGNTHSSFKWRWYHFDGVDWDQSR-RLNNRIYKFRGHGKAWDW 185
Query: 67 ERKEFYLHQFGKNQADFNFNNPQVVEYF 94
E + AD + ++P+VV
Sbjct: 186 EVDTENGNYDYLMYADIDMDHPEVVNEL 213
>d1jaea2 c.1.8.1 (A:1-378) Animal alpha-amylase {Yellow mealworm
(Tenebrio molitor), larva [TaxId: 7067]}
Length = 378
Score = 26.8 bits (58), Expect = 0.39
Identities = 7/94 (7%), Positives = 19/94 (20%), Gaps = 15/94 (15%)
Query: 1 IHLLLSFSPDYSSTKHEFFQKSVKKEEPYTNYYVWAPPKGYSSDGTPLAPNNWLSKEGGS 60
+ + + ++ + + + NY P
Sbjct: 89 VRIYVDAVINHMTGMNGVGTSGSSADHDGMNYPAV--------------PYGSGDFHSPC 134
Query: 61 AWEWNAERKEFYLHQFGKNQADFNFNNPQVVEYF 94
N + + + D N + V
Sbjct: 135 EV-NNYQDADNVRNCELVGLRDLNQGSDYVRGVL 167
>d1g94a2 c.1.8.1 (A:1-354) Bacterial alpha-amylase
{Pseudoalteromonas haloplanktis (Alteromonas
haloplanktis) [TaxId: 228]}
Length = 354
Score = 25.6 bits (55), Expect = 1.2
Identities = 6/66 (9%), Positives = 18/66 (27%), Gaps = 1/66 (1%)
Query: 29 YTNYYVWAPPKGYSSDGTPLAPNNWLSKEGGSAWEWNAERKEFYLHQFGKNQADFNFNNP 88
+ A + +P ++ + ++ +R + AD + +
Sbjct: 92 AGSGTGTAGNSFGNKSFPIYSPQDFHESCTINNSDYGNDRYRVQNCELV-GLADLDTASN 150
Query: 89 QVVEYF 94
V
Sbjct: 151 YVQNTI 156
>d1ud2a2 c.1.8.1 (A:1-390) Bacterial alpha-amylase {Bacillus sp.,
ksm-k38 [TaxId: 1409]}
Length = 390
Score = 25.0 bits (53), Expect = 1.8
Identities = 8/79 (10%), Positives = 23/79 (29%), Gaps = 2/79 (2%)
Query: 16 HEFFQKSVKKEEPYTNYYVWAPPKGYSSDGTPLAPNNWLSKEGGSAWEWNAERKEFYLHQ 75
+ + + W D N + + + W W + +
Sbjct: 136 DAWTGFDFSGRNNAYSDFKWRWFHFNGVDWDQRYQENHIFRFANTNWNWRVDEENGNYDY 195
Query: 76 FGKNQADFNFNNPQVVEYF 94
++ +F++P+V +
Sbjct: 196 LL--GSNIDFSHPEVQDEL 212
>d1hvxa2 c.1.8.1 (A:1-393) Bacterial alpha-amylase {Bacillus
stearothermophilus [TaxId: 1422]}
Length = 393
Score = 24.6 bits (52), Expect = 2.1
Identities = 11/79 (13%), Positives = 23/79 (29%)
Query: 16 HEFFQKSVKKEEPYTNYYVWAPPKGYSSDGTPLAPNNWLSKEGGSAWEWNAERKEFYLHQ 75
+ + + + W D + + K G W+ E +
Sbjct: 137 QAWTKFDFPGRGNTYSSFKWRWYHFDGVDWDESRKLSRIYKFRGIGKAWDWEVDTENGNY 196
Query: 76 FGKNQADFNFNNPQVVEYF 94
AD + ++P+VV
Sbjct: 197 DYLMYADLDMDHPEVVTEL 215
>d1hg8a_ b.80.1.3 (A:) Polygalacturonase {Fusarium moniliforme
[TaxId: 117187]}
Length = 349
Score = 22.8 bits (48), Expect = 8.5
Identities = 6/30 (20%), Positives = 15/30 (50%)
Query: 38 PKGYSSDGTPLAPNNWLSKEGGSAWEWNAE 67
P G D + L ++ ++ +G + + A+
Sbjct: 29 PTGKQLDLSSLQNDSTVTFKGTTTFATTAD 58
>d1wzla3 c.1.8.1 (A:121-502) Maltogenic amylase, central domain
{Thermoactinomyces vulgaris, TVAII [TaxId: 2026]}
Length = 382
Score = 23.1 bits (48), Expect = 8.5
Identities = 5/33 (15%), Positives = 7/33 (21%)
Query: 62 WEWNAERKEFYLHQFGKNQADFNFNNPQVVEYF 94
+ NP+V EY
Sbjct: 155 VSKTSRTNYETFAVQVPAMPKLRTENPEVKEYL 187
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.314 0.133 0.433
Gapped
Lambda K H
0.267 0.0420 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 390,756
Number of extensions: 16537
Number of successful extensions: 44
Number of sequences better than 10.0: 1
Number of HSP's gapped: 44
Number of HSP's successfully gapped: 21
Length of query: 94
Length of database: 2,407,596
Length adjustment: 57
Effective length of query: 37
Effective length of database: 1,624,986
Effective search space: 60124482
Effective search space used: 60124482
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 47 (22.7 bits)