BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy12589
(149 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1XFU|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFV|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFW|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFY|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFZ|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 114 bits (285), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 61/149 (40%), Positives = 91/149 (61%), Gaps = 7/149 (4%)
Query: 1 MAHHFREQDIDEFRECFFLFARNG--TIKTLDELSVIMRSLGMSPTIAELKKYL----AE 54
MA E+ I EF+E F LF ++G TI T EL +MRSLG +PT AEL+ + A+
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITT-KELGTVMRSLGQNPTEAELQDMINEVDAD 59
Query: 55 KGGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSS 114
G + FP+FL +M K D +E+ +AF+ D +G + A L+HV+ N GE L+
Sbjct: 60 GNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTD 119
Query: 115 KEVDQIFREANVTMNSKVRYEDFVKIACA 143
+EVDQ+ REA++ + +V YE+FV++ A
Sbjct: 120 EEVDQMIREADIDGDGQVNYEEFVQMMTA 148
Score = 29.3 bits (64), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 17/78 (21%), Positives = 35/78 (44%), Gaps = 4/78 (5%)
Query: 74 AEDIPKEVVDAFKAA----DTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMN 129
A+ + +E + FK A D GT+ K L V+ + G+ + E+ + E + N
Sbjct: 2 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 61
Query: 130 SKVRYEDFVKIACAPVPD 147
+ + +F+ + + D
Sbjct: 62 GTIDFPEFLTMMARKMKD 79
>pdb|2BE6|A Chain A, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|B Chain B, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|C Chain C, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|1ZUZ|A Chain A, Calmodulin In Complex With A Mutant Peptide From Human
Drp-1 Kinase
Length = 150
Score = 112 bits (281), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 60/151 (39%), Positives = 92/151 (60%), Gaps = 7/151 (4%)
Query: 1 MAHHFREQDIDEFRECFFLFARNG--TIKTLDELSVIMRSLGMSPTIAELKKYL----AE 54
MA E+ I EF+E F LF ++G TI T EL +MRSLG +PT AEL+ + A+
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITT-KELGTVMRSLGQNPTEAELQDMINEVDAD 59
Query: 55 KGGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSS 114
G + FP+FL +M K D +E+ +AF+ D +G + A L+HV+ N GE L+
Sbjct: 60 GNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTD 119
Query: 115 KEVDQIFREANVTMNSKVRYEDFVKIACAPV 145
+EVD++ REA++ + +V YE+FV++ A +
Sbjct: 120 EEVDEMIREADIDGDGQVNYEEFVQMMTAKL 150
Score = 29.3 bits (64), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 17/78 (21%), Positives = 35/78 (44%), Gaps = 4/78 (5%)
Query: 74 AEDIPKEVVDAFKAA----DTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMN 129
A+ + +E + FK A D GT+ K L V+ + G+ + E+ + E + N
Sbjct: 2 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 61
Query: 130 SKVRYEDFVKIACAPVPD 147
+ + +F+ + + D
Sbjct: 62 GTIDFPEFLTMMARKMKD 79
>pdb|4DJC|A Chain A, 1.35 A Crystal Structure Of The Nav1.5 Diii-Iv-CaCAM
COMPLEX
Length = 152
Score = 112 bits (281), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 60/149 (40%), Positives = 91/149 (61%), Gaps = 7/149 (4%)
Query: 1 MAHHFREQDIDEFRECFFLFARNG--TIKTLDELSVIMRSLGMSPTIAELKKYL----AE 54
MA E+ I EF+E F LF ++G TI T EL +MRSLG +PT AEL+ + A+
Sbjct: 4 MADQLTEEQIAEFKEAFSLFDKDGDGTITT-KELGTVMRSLGQNPTEAELQDMINEVDAD 62
Query: 55 KGGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSS 114
G + FP+FL +M K D +E+ +AF+ D +G + A L+HV+ N GE L+
Sbjct: 63 GNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTD 122
Query: 115 KEVDQIFREANVTMNSKVRYEDFVKIACA 143
+EVD++ REA++ + +V YE+FV++ A
Sbjct: 123 EEVDEMIREADIDGDGQVNYEEFVQMMTA 151
Score = 30.0 bits (66), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 17/82 (20%), Positives = 38/82 (46%), Gaps = 4/82 (4%)
Query: 70 THSKAEDIPKEVVDAFKAA----DTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREAN 125
+++ A+ + +E + FK A D GT+ K L V+ + G+ + E+ + E +
Sbjct: 1 SNAMADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVD 60
Query: 126 VTMNSKVRYEDFVKIACAPVPD 147
N + + +F+ + + D
Sbjct: 61 ADGNGTIDFPEFLTMMARKMKD 82
>pdb|1IQ5|A Chain A, CalmodulinNEMATODE CA2+CALMODULIN DEPENDENT KINASE KINASE
Fragment
pdb|1LVC|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|2BKI|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|2BKI|D Chain D, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|1WRZ|A Chain A, Calmodulin Complexed With A Peptide From A Human
Death-Associated Protein Kinase
pdb|2V01|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Pb
pdb|2V02|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Ba
pdb|2R28|A Chain A, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2R28|B Chain B, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2W73|A Chain A, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|B Chain B, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|E Chain E, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|F Chain F, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|3HR4|B Chain B, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|D Chain D, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|F Chain F, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|H Chain H, Human Inos Reductase And Calmodulin Complex
pdb|3OXQ|A Chain A, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|B Chain B, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|C Chain C, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|D Chain D, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|2Y4V|A Chain A, Crystal Structure Of Human Calmodulin In Complex With A
Dap Kinase-1 Mutant (W305y) Peptide
pdb|3SJQ|A Chain A, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|3SJQ|B Chain B, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|4DCK|B Chain B, Crystal Structure Of The C-Terminus Of Voltage-Gated
Sodium Channel In Complex With Fgf13 And Cam
pdb|3SUI|A Chain A, Crystal Structure Of Ca2+-Calmodulin In Complex With A
Trpv1 C- Terminal Peptide
pdb|4G27|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Phenylurea
pdb|4G28|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Ebio-1
Length = 149
Score = 112 bits (281), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 60/149 (40%), Positives = 91/149 (61%), Gaps = 7/149 (4%)
Query: 1 MAHHFREQDIDEFRECFFLFARNG--TIKTLDELSVIMRSLGMSPTIAELKKYL----AE 54
MA E+ I EF+E F LF ++G TI T EL +MRSLG +PT AEL+ + A+
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITT-KELGTVMRSLGQNPTEAELQDMINEVDAD 59
Query: 55 KGGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSS 114
G + FP+FL +M K D +E+ +AF+ D +G + A L+HV+ N GE L+
Sbjct: 60 GNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTD 119
Query: 115 KEVDQIFREANVTMNSKVRYEDFVKIACA 143
+EVD++ REA++ + +V YE+FV++ A
Sbjct: 120 EEVDEMIREADIDGDGQVNYEEFVQMMTA 148
Score = 28.9 bits (63), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 17/78 (21%), Positives = 35/78 (44%), Gaps = 4/78 (5%)
Query: 74 AEDIPKEVVDAFKAA----DTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMN 129
A+ + +E + FK A D GT+ K L V+ + G+ + E+ + E + N
Sbjct: 2 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 61
Query: 130 SKVRYEDFVKIACAPVPD 147
+ + +F+ + + D
Sbjct: 62 GTIDFPEFLTMMARKMKD 79
>pdb|2YGG|B Chain B, Complex Of Cambr And Cam
Length = 150
Score = 112 bits (281), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 60/149 (40%), Positives = 91/149 (61%), Gaps = 7/149 (4%)
Query: 1 MAHHFREQDIDEFRECFFLFARNG--TIKTLDELSVIMRSLGMSPTIAELKKYL----AE 54
MA E+ I EF+E F LF ++G TI T EL +MRSLG +PT AEL+ + A+
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITT-KELGTVMRSLGQNPTEAELQDMINEVDAD 59
Query: 55 KGGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSS 114
G + FP+FL +M K D +E+ +AF+ D +G + A L+HV+ N GE L+
Sbjct: 60 GNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTD 119
Query: 115 KEVDQIFREANVTMNSKVRYEDFVKIACA 143
+EVD++ REA++ + +V YE+FV++ A
Sbjct: 120 EEVDEMIREADIDGDGQVNYEEFVQMMTA 148
Score = 28.9 bits (63), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/78 (21%), Positives = 35/78 (44%), Gaps = 4/78 (5%)
Query: 74 AEDIPKEVVDAFKAA----DTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMN 129
A+ + +E + FK A D GT+ K L V+ + G+ + E+ + E + N
Sbjct: 2 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 61
Query: 130 SKVRYEDFVKIACAPVPD 147
+ + +F+ + + D
Sbjct: 62 GTIDFPEFLTMMARKMKD 79
>pdb|2WEL|D Chain D, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 150
Score = 112 bits (280), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 60/149 (40%), Positives = 91/149 (61%), Gaps = 7/149 (4%)
Query: 1 MAHHFREQDIDEFRECFFLFARNG--TIKTLDELSVIMRSLGMSPTIAELKKYL----AE 54
MA E+ I EF+E F LF ++G TI T EL +MRSLG +PT AEL+ + A+
Sbjct: 2 MADQLTEEQIAEFKEAFSLFDKDGDGTITT-KELGTVMRSLGQNPTEAELQDMINEVDAD 60
Query: 55 KGGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSS 114
G + FP+FL +M K D +E+ +AF+ D +G + A L+HV+ N GE L+
Sbjct: 61 GNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTD 120
Query: 115 KEVDQIFREANVTMNSKVRYEDFVKIACA 143
+EVD++ REA++ + +V YE+FV++ A
Sbjct: 121 EEVDEMIREADIDGDGQVNYEEFVQMMTA 149
Score = 30.0 bits (66), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 18/80 (22%), Positives = 36/80 (45%), Gaps = 4/80 (5%)
Query: 72 SKAEDIPKEVVDAFKAA----DTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVT 127
S A+ + +E + FK A D GT+ K L V+ + G+ + E+ + E +
Sbjct: 1 SMADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDAD 60
Query: 128 MNSKVRYEDFVKIACAPVPD 147
N + + +F+ + + D
Sbjct: 61 GNGTIDFPEFLTMMARKMKD 80
>pdb|1DMO|A Chain A, Calmodulin, Nmr, 30 Structures
pdb|3CLN|A Chain A, Structure Of Calmodulin Refined At 2.2 Angstroms
Resolution
Length = 148
Score = 112 bits (280), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 60/148 (40%), Positives = 90/148 (60%), Gaps = 7/148 (4%)
Query: 2 AHHFREQDIDEFRECFFLFARNG--TIKTLDELSVIMRSLGMSPTIAELKKYL----AEK 55
A E+ I EF+E F LF ++G TI T EL +MRSLG +PT AEL+ + A+
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITT-KELGTVMRSLGQNPTEAELQDMINEVDADG 59
Query: 56 GGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSK 115
G + FP+FL +M K D +E+ +AF+ D +G + A L+HV+ N GE L+ +
Sbjct: 60 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE 119
Query: 116 EVDQIFREANVTMNSKVRYEDFVKIACA 143
EVD++ REAN+ + +V YE+FV++ A
Sbjct: 120 EVDEMIREANIDGDGQVNYEEFVQMMTA 147
Score = 28.9 bits (63), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 17/78 (21%), Positives = 35/78 (44%), Gaps = 4/78 (5%)
Query: 74 AEDIPKEVVDAFKAA----DTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMN 129
A+ + +E + FK A D GT+ K L V+ + G+ + E+ + E + N
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 130 SKVRYEDFVKIACAPVPD 147
+ + +F+ + + D
Sbjct: 61 GTIDFPEFLTMMARKMKD 78
>pdb|2F2O|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2O|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
Length = 179
Score = 112 bits (279), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 60/149 (40%), Positives = 91/149 (61%), Gaps = 7/149 (4%)
Query: 1 MAHHFREQDIDEFRECFFLFARNG--TIKTLDELSVIMRSLGMSPTIAELKKYL----AE 54
MA E+ I EF+E F LF ++G TI T EL +MRSLG +PT AEL+ + A+
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTI-TTKELGTVMRSLGQNPTEAELQDMINEVDAD 59
Query: 55 KGGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSS 114
G + FP+FL +M K D +E+ +AF+ D +G + A L+HV+ N GE L+
Sbjct: 60 GNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTD 119
Query: 115 KEVDQIFREANVTMNSKVRYEDFVKIACA 143
+EVD++ REA++ + +V YE+FV++ A
Sbjct: 120 EEVDEMIREADIDGDGQVNYEEFVQMMTA 148
Score = 28.9 bits (63), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/78 (21%), Positives = 35/78 (44%), Gaps = 4/78 (5%)
Query: 74 AEDIPKEVVDAFKAA----DTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMN 129
A+ + +E + FK A D GT+ K L V+ + G+ + E+ + E + N
Sbjct: 2 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 61
Query: 130 SKVRYEDFVKIACAPVPD 147
+ + +F+ + + D
Sbjct: 62 GTIDFPEFLTMMARKMKD 79
>pdb|4AQR|A Chain A, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
pdb|4AQR|B Chain B, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
Length = 149
Score = 112 bits (279), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 58/148 (39%), Positives = 89/148 (60%), Gaps = 5/148 (3%)
Query: 1 MAHHFREQDIDEFRECFFLFARNGT-IKTLDELSVIMRSLGMSPTIAELKKYL----AEK 55
MA + I EF+E F LF ++G T EL +MRSLG +PT AEL+ + A+
Sbjct: 1 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 56 GGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSK 115
G + FP+FL +M K D +E+ +AF+ D ++G + A L+HV+ N GE L+ +
Sbjct: 61 NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120
Query: 116 EVDQIFREANVTMNSKVRYEDFVKIACA 143
EVD++ REA+V + ++ YE+FVK+ A
Sbjct: 121 EVDEMIREADVDGDGQINYEEFVKVMMA 148
>pdb|1RFJ|A Chain A, Crystal Structure Of Potato Calmodulin Pcm6
Length = 149
Score = 112 bits (279), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 58/148 (39%), Positives = 89/148 (60%), Gaps = 5/148 (3%)
Query: 1 MAHHFREQDIDEFRECFFLFARNGT-IKTLDELSVIMRSLGMSPTIAELKKYL----AEK 55
MA E I EF+E F LF ++G T EL +MRSLG +PT AEL+ + A+
Sbjct: 1 MADQLTEDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 56 GGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSK 115
G + FP+FL +M K D +E+ +AF+ D ++G + A L+HV+ N GE L+ +
Sbjct: 61 NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDE 120
Query: 116 EVDQIFREANVTMNSKVRYEDFVKIACA 143
EVD++ REA+V + ++ Y++FVK+ A
Sbjct: 121 EVDEMIREADVDGDGQINYDEFVKVMMA 148
Score = 28.9 bits (63), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/73 (21%), Positives = 31/73 (42%)
Query: 75 EDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRY 134
ED E +AF D G + K L V+ + G+ + E+ + E + N + +
Sbjct: 7 EDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 66
Query: 135 EDFVKIACAPVPD 147
+F+ + + D
Sbjct: 67 PEFLNLMARKMKD 79
>pdb|1CLM|A Chain A, Structure Of Paramecium Tetraurelia Calmodulin At 1.8
Angstroms Resolution
Length = 148
Score = 112 bits (279), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 58/148 (39%), Positives = 90/148 (60%), Gaps = 7/148 (4%)
Query: 2 AHHFREQDIDEFRECFFLFARNG--TIKTLDELSVIMRSLGMSPTIAELKKYL----AEK 55
A E+ I EF+E F LF ++G TI T EL +MRSLG +PT AEL+ + A+
Sbjct: 1 AQELTEEQIAEFKEAFALFDKDGDGTITT-KELGTVMRSLGQNPTEAELQDMINEVDADG 59
Query: 56 GGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSK 115
G + FP+FL +M K +D +E+++AFK D +G + A L+HV+ N GE L+
Sbjct: 60 NGTIDFPEFLSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDD 119
Query: 116 EVDQIFREANVTMNSKVRYEDFVKIACA 143
EVD++ REA++ + + YE+FV++ +
Sbjct: 120 EVDEMIREADIDGDGHINYEEFVRMMVS 147
>pdb|1EXR|A Chain A, The 1.0 Angstrom Crystal Structure Of Ca+2 Bound
Calmodulin
pdb|1N0Y|A Chain A, Crystal Structure Of Pb-Bound Calmodulin
pdb|1N0Y|B Chain B, Crystal Structure Of Pb-Bound Calmodulin
pdb|1OSA|A Chain A, Crystal Structure Of Recombinant Paramecium Tetraurelia
Calmodulin At 1.68 Angstroms Resolution
Length = 148
Score = 112 bits (279), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 58/148 (39%), Positives = 90/148 (60%), Gaps = 7/148 (4%)
Query: 2 AHHFREQDIDEFRECFFLFARNG--TIKTLDELSVIMRSLGMSPTIAELKKYL----AEK 55
A E+ I EF+E F LF ++G TI T EL +MRSLG +PT AEL+ + A+
Sbjct: 1 AEQLTEEQIAEFKEAFALFDKDGDGTITT-KELGTVMRSLGQNPTEAELQDMINEVDADG 59
Query: 56 GGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSK 115
G + FP+FL +M K +D +E+++AFK D +G + A L+HV+ N GE L+
Sbjct: 60 NGTIDFPEFLSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDD 119
Query: 116 EVDQIFREANVTMNSKVRYEDFVKIACA 143
EVD++ REA++ + + YE+FV++ +
Sbjct: 120 EVDEMIREADIDGDGHINYEEFVRMMVS 147
>pdb|1PRW|A Chain A, Crystal Structure Of Bovine Brain Ca++ Calmodulin In A
Compact Form
Length = 149
Score = 110 bits (275), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 59/148 (39%), Positives = 90/148 (60%), Gaps = 7/148 (4%)
Query: 2 AHHFREQDIDEFRECFFLFARNG--TIKTLDELSVIMRSLGMSPTIAELKKYL----AEK 55
A E+ I EF+E F LF ++G TI T EL +MRSLG +PT AEL+ + A+
Sbjct: 2 ADQLTEEQIAEFKEAFSLFDKDGDGTITTK-ELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 56 GGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSK 115
G + FP+FL +M K D +E+ +AF+ D +G + A L+HV+ N GE L+ +
Sbjct: 61 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEXLTDE 120
Query: 116 EVDQIFREANVTMNSKVRYEDFVKIACA 143
EVD++ REA++ + +V YE+FV++ A
Sbjct: 121 EVDEMIREADIDGDGQVNYEEFVQMMTA 148
Score = 28.9 bits (63), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/78 (21%), Positives = 35/78 (44%), Gaps = 4/78 (5%)
Query: 74 AEDIPKEVVDAFKAA----DTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMN 129
A+ + +E + FK A D GT+ K L V+ + G+ + E+ + E + N
Sbjct: 2 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 61
Query: 130 SKVRYEDFVKIACAPVPD 147
+ + +F+ + + D
Sbjct: 62 GTIDFPEFLTMMARKMKD 79
>pdb|1UP5|A Chain A, Chicken Calmodulin
pdb|1UP5|B Chain B, Chicken Calmodulin
Length = 148
Score = 110 bits (275), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 59/148 (39%), Positives = 90/148 (60%), Gaps = 7/148 (4%)
Query: 2 AHHFREQDIDEFRECFFLFARNG--TIKTLDELSVIMRSLGMSPTIAELKKYL----AEK 55
A E+ I EF+E F LF ++G TI T EL +MRSLG +PT AEL+ + A+
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTK-ELGTVMRSLGQNPTEAELQDMINEVDADG 59
Query: 56 GGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSK 115
G + FP+FL +M K D +E+ +AF+ D +G + A L+HV+ N GE L+ +
Sbjct: 60 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEXLTDE 119
Query: 116 EVDQIFREANVTMNSKVRYEDFVKIACA 143
EVD++ REA++ + +V YE+FV++ A
Sbjct: 120 EVDEMIREADIDGDGQVNYEEFVQMMTA 147
Score = 28.9 bits (63), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/78 (21%), Positives = 35/78 (44%), Gaps = 4/78 (5%)
Query: 74 AEDIPKEVVDAFKAA----DTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMN 129
A+ + +E + FK A D GT+ K L V+ + G+ + E+ + E + N
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 130 SKVRYEDFVKIACAPVPD 147
+ + +F+ + + D
Sbjct: 61 GTIDFPEFLTMMARKMKD 78
>pdb|1CDL|A Chain A, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|B Chain B, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|C Chain C, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|D Chain D, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1PK0|D Chain D, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|E Chain E, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|F Chain F, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|3GP2|A Chain A, Calmodulin Bound To Peptide From Calmodulin Kinase Ii
(Camkii)
Length = 147
Score = 110 bits (275), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 59/148 (39%), Positives = 90/148 (60%), Gaps = 7/148 (4%)
Query: 2 AHHFREQDIDEFRECFFLFARNG--TIKTLDELSVIMRSLGMSPTIAELKKYL----AEK 55
A E+ I EF+E F LF ++G TI T EL +MRSLG +PT AEL+ + A+
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTK-ELGTVMRSLGQNPTEAELQDMINEVDADG 59
Query: 56 GGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSK 115
G + FP+FL +M K D +E+ +AF+ D +G + A L+HV+ N GE L+ +
Sbjct: 60 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE 119
Query: 116 EVDQIFREANVTMNSKVRYEDFVKIACA 143
EVD++ REA++ + +V YE+FV++ A
Sbjct: 120 EVDEMIREADIDGDGQVNYEEFVQMMTA 147
Score = 28.9 bits (63), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/78 (21%), Positives = 35/78 (44%), Gaps = 4/78 (5%)
Query: 74 AEDIPKEVVDAFKAA----DTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMN 129
A+ + +E + FK A D GT+ K L V+ + G+ + E+ + E + N
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 130 SKVRYEDFVKIACAPVPD 147
+ + +F+ + + D
Sbjct: 61 GTIDFPEFLTMMARKMKD 78
>pdb|3EWT|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
pdb|3EWV|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
Length = 154
Score = 110 bits (275), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 59/148 (39%), Positives = 90/148 (60%), Gaps = 7/148 (4%)
Query: 2 AHHFREQDIDEFRECFFLFARNG--TIKTLDELSVIMRSLGMSPTIAELKKYL----AEK 55
A E+ I EF+E F LF ++G TI T EL +MRSLG +PT AEL+ + A+
Sbjct: 7 ADQLTEEQIAEFKEAFSLFDKDGDGTITTK-ELGTVMRSLGQNPTEAELQDMINEVDADG 65
Query: 56 GGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSK 115
G + FP+FL +M K D +E+ +AF+ D +G + A L+HV+ N GE L+ +
Sbjct: 66 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE 125
Query: 116 EVDQIFREANVTMNSKVRYEDFVKIACA 143
EVD++ REA++ + +V YE+FV++ A
Sbjct: 126 EVDEMIREADIDGDGQVNYEEFVQMMTA 153
Score = 28.9 bits (63), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/78 (21%), Positives = 35/78 (44%), Gaps = 4/78 (5%)
Query: 74 AEDIPKEVVDAFKAA----DTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMN 129
A+ + +E + FK A D GT+ K L V+ + G+ + E+ + E + N
Sbjct: 7 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 66
Query: 130 SKVRYEDFVKIACAPVPD 147
+ + +F+ + + D
Sbjct: 67 GTIDFPEFLTMMARKMKD 84
>pdb|1CM1|A Chain A, Motions Of Calmodulin-Single-Conformer Refinement
pdb|1CM4|A Chain A, Motions Of Calmodulin-four-conformer Refinement
pdb|1CKK|A Chain A, CalmodulinRAT CA2+CALMODULIN DEPENDENT PROTEIN KINASE
Fragment
pdb|1CFF|A Chain A, Nmr Solution Structure Of A Complex Of Calmodulin With A
Binding Peptide Of The Ca2+-Pump
pdb|1QIV|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd), 1:2
Complex
pdb|1QIW|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1QIW|B Chain B, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1G4Y|R Chain R, 1.60 A Crystal Structure Of The Gating Domain From Small
Conductance Potassium Channel Complexed With
Calcium-Calmodulin
pdb|1K90|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1IWQ|A Chain A, Crystal Structure Of Marcks Calmodulin Binding Domain
Peptide Complexed With Ca2+CALMODULIN
pdb|1NWD|A Chain A, Solution Structure Of Ca2+CALMODULIN BOUND TO THE C-
Terminal Domain Of Petunia Glutamate Decarboxylase
pdb|1L7Z|A Chain A, Crystal Structure Of Ca2+/calmodulin Complexed With
Myristoylated Cap-23/nap-22 Peptide
pdb|1S26|D Chain D, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|E Chain E, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|F Chain F, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1SK6|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1QX5|D Chain D, Crystal Structure Of Apocalmodulin
pdb|1QX5|I Chain I, Crystal Structure Of Apocalmodulin
pdb|1QX5|B Chain B, Crystal Structure Of Apocalmodulin
pdb|1QX5|J Chain J, Crystal Structure Of Apocalmodulin
pdb|1QX5|K Chain K, Crystal Structure Of Apocalmodulin
pdb|1QX5|T Chain T, Crystal Structure Of Apocalmodulin
pdb|1QX5|R Chain R, Crystal Structure Of Apocalmodulin
pdb|1QX5|Y Chain Y, Crystal Structure Of Apocalmodulin
pdb|1XA5|A Chain A, Structure Of Calmodulin In Complex With Kar-2, A Bis-Indol
Alkaloid
pdb|1SY9|A Chain A, Structure Of Calmodulin Complexed With A Fragment Of The
Olfactory Cng Channel
pdb|2F3Y|A Chain A, CalmodulinIQ DOMAIN COMPLEX
pdb|2F3Z|A Chain A, CalmodulinIQ-Aa Domain Complex
pdb|1X02|A Chain A, Solution Structure Of Stereo Array Isotope Labeled (Sail)
Calmodulin
pdb|2DFS|B Chain B, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|C Chain C, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|D Chain D, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|E Chain E, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|F Chain F, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|G Chain G, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|N Chain N, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|O Chain O, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|P Chain P, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|Q Chain Q, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|R Chain R, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|S Chain S, 3-D Structure Of Myosin-V Inhibited State
pdb|1YR5|A Chain A, 1.7-A Structure Of Calmodulin Bound To A Peptide From Dap
Kinase
pdb|2FOT|A Chain A, Crystal Structure Of The Complex Between Calmodulin And
Alphaii-Spectrin
pdb|2BCX|A Chain A, Crystal Structure Of Calmodulin In Complex With A
Ryanodine Receptor Peptide
pdb|1A29|A Chain A, Calmodulin Complexed With Trifluoperazine (1:2 Complex)
pdb|1CFC|A Chain A, Calcium-Free Calmodulin
pdb|1CFD|A Chain A, Calcium-Free Calmodulin
pdb|1CLL|A Chain A, Calmodulin Structure Refined At 1.7 Angstroms Resolution
pdb|1CTR|A Chain A, Drug Binding By Calmodulin: Crystal Structure Of A
Calmodulin-Trifluoperazine Complex
pdb|1LIN|A Chain A, Calmodulin Complexed With Trifluoperazine (1:4 Complex)
pdb|1MUX|A Chain A, Solution Nmr Structure Of CalmodulinW-7 Complex: The Basis
Of Diversity In Molecular Recognition, 30 Structures
pdb|2HQW|A Chain A, Crystal Structure Of Ca2+CALMODULIN BOUND TO NMDA RECEPTOR
NR1C1 Peptide
pdb|2O5G|A Chain A, Calmodulin-Smooth Muscle Light Chain Kinase Peptide
Complex
pdb|2O60|A Chain A, Calmodulin Bound To Peptide From Neuronal Nitric Oxide
Synthase
pdb|3BXK|A Chain A, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXK|C Chain C, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXL|A Chain A, Crystal Structure Of The R-Type Calcium Channel (Cav2.3)
Iq Domain And Ca2+calmodulin Complex
pdb|2K0E|A Chain A, A Coupled Equilibrium Shift Mechanism In Calmodulin-
Mediated Signal Transduction
pdb|2K0F|A Chain A, Calmodulin Complexed With Calmodulin-Binding Peptide From
Smooth Muscle Myosin Light Chain Kinase
pdb|3DVE|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain Complex
pdb|3DVJ|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain (Without
Cloning Artifact, Hm To Tv) Complex
pdb|3DVK|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.3 Iq Domain Complex
pdb|3DVM|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.1 Iq Domain Complex
pdb|2JZI|A Chain A, Structure Of Calmodulin Complexed With The Calmodulin
Binding Domain Of Calcineurin
pdb|3BYA|A Chain A, Structure Of A Calmodulin Complex
pdb|3G43|A Chain A, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|B Chain B, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|C Chain C, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|D Chain D, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|2KNE|A Chain A, Calmodulin Wraps Around Its Binding Domain In The Plasma
Membrane Ca2+ Pump Anchored By A Novel 18-1 Motif
pdb|2KDU|A Chain A, Structural Basis Of The Munc13-1CA2+-Calmodulin
Interaction: A Novel 1-26 Calmodulin Binding Motif With
A Bipartite Binding Mode
pdb|2X0G|B Chain B, X-ray Structure Of A Dap-kinase Calmodulin Complex
pdb|3GOF|A Chain A, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3GOF|B Chain B, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3IF7|A Chain A, Structure Of Calmodulin Complexed With Its First
Endogenous Inhibitor, Sphingosylphosphorylcholine
pdb|2L53|A Chain A, Solution Nmr Structure Of Apo-Calmodulin In Complex With
The Iq Motif Of Human Cardiac Sodium Channel Nav1.5
pdb|2L7L|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
Calmodulin Kinase I
pdb|2LL6|A Chain A, Solution Nmr Structure Of Cam Bound To Inos Cam Binding
Domain Peptide
pdb|2LL7|A Chain A, Solution Nmr Structure Of Cam Bound To The Enos Cam
Binding Domain Peptide
pdb|4EHQ|A Chain A, Crystal Structure Of Calmodulin Binding Domain Of Orai1 In
Complex With Ca2+CALMODULIN DISPLAYS A UNIQUE BINDING
MODE
Length = 148
Score = 110 bits (275), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 59/148 (39%), Positives = 90/148 (60%), Gaps = 7/148 (4%)
Query: 2 AHHFREQDIDEFRECFFLFARNG--TIKTLDELSVIMRSLGMSPTIAELKKYL----AEK 55
A E+ I EF+E F LF ++G TI T EL +MRSLG +PT AEL+ + A+
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTK-ELGTVMRSLGQNPTEAELQDMINEVDADG 59
Query: 56 GGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSK 115
G + FP+FL +M K D +E+ +AF+ D +G + A L+HV+ N GE L+ +
Sbjct: 60 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE 119
Query: 116 EVDQIFREANVTMNSKVRYEDFVKIACA 143
EVD++ REA++ + +V YE+FV++ A
Sbjct: 120 EVDEMIREADIDGDGQVNYEEFVQMMTA 147
Score = 28.9 bits (63), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/78 (21%), Positives = 35/78 (44%), Gaps = 4/78 (5%)
Query: 74 AEDIPKEVVDAFKAA----DTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMN 129
A+ + +E + FK A D GT+ K L V+ + G+ + E+ + E + N
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 130 SKVRYEDFVKIACAPVPD 147
+ + +F+ + + D
Sbjct: 61 GTIDFPEFLTMMARKMKD 78
>pdb|2BKH|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure
pdb|2VAS|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigor State
pdb|3GN4|B Chain B, Myosin Lever Arm
pdb|3GN4|D Chain D, Myosin Lever Arm
pdb|3GN4|F Chain F, Myosin Lever Arm
pdb|3GN4|H Chain H, Myosin Lever Arm
pdb|3L9I|C Chain C, Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant Crystal
Structure
pdb|2X51|B Chain B, M6 Delta Insert1
pdb|4ANJ|B Chain B, Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke State
(Mg.Adp.Alf4)
pdb|4DBP|C Chain C, Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal
Structure
pdb|4DBQ|B Chain B, Myosin Vi D179y (md-insert2-cam, Delta-insert1) Post-rigor
State
Length = 149
Score = 110 bits (274), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 59/149 (39%), Positives = 90/149 (60%), Gaps = 7/149 (4%)
Query: 1 MAHHFREQDIDEFRECFFLFARNG--TIKTLDELSVIMRSLGMSPTIAELKKYL----AE 54
MA E+ I EF+E F LF ++G TI T EL +MRSLG +PT AEL+ + A+
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITT-KELGTVMRSLGQNPTEAELQDMINEVDAD 59
Query: 55 KGGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSS 114
G + FP+FL +M K D +E+ +AF+ D +G + A L+HV+ N GE L+
Sbjct: 60 GNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTD 119
Query: 115 KEVDQIFREANVTMNSKVRYEDFVKIACA 143
+EVD++ REA++ + +V YE+FV + +
Sbjct: 120 EEVDEMIREADIDGDGQVNYEEFVTMMTS 148
Score = 29.3 bits (64), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 17/78 (21%), Positives = 35/78 (44%), Gaps = 4/78 (5%)
Query: 74 AEDIPKEVVDAFKAA----DTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMN 129
A+ + +E + FK A D GT+ K L V+ + G+ + E+ + E + N
Sbjct: 2 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 61
Query: 130 SKVRYEDFVKIACAPVPD 147
+ + +F+ + + D
Sbjct: 62 GTIDFPEFLTMMARKMKD 79
>pdb|2K0J|A Chain A, Solution Structure Of Cam Complexed To Drp1p
pdb|2K61|A Chain A, Solution Structure Of Cam Complexed To Dapk Peptide
Length = 148
Score = 110 bits (274), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 59/148 (39%), Positives = 90/148 (60%), Gaps = 7/148 (4%)
Query: 2 AHHFREQDIDEFRECFFLFARNG--TIKTLDELSVIMRSLGMSPTIAELKKYL----AEK 55
A E+ I EF+E F LF ++G TI T EL +MRSLG +PT AEL+ + A+
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTK-ELGTVMRSLGQNPTEAELQDMINEVDADG 59
Query: 56 GGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSK 115
G + FP+FL +M K D +E+ +AF+ D +G + A L+HV+ N GE L+ +
Sbjct: 60 DGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE 119
Query: 116 EVDQIFREANVTMNSKVRYEDFVKIACA 143
EVD++ REA++ + +V YE+FV++ A
Sbjct: 120 EVDEMIREADIDGDGQVNYEEFVQMMTA 147
Score = 26.9 bits (58), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 16/78 (20%), Positives = 35/78 (44%), Gaps = 4/78 (5%)
Query: 74 AEDIPKEVVDAFKAA----DTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMN 129
A+ + +E + FK A D GT+ K L V+ + G+ + E+ + E + +
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGD 60
Query: 130 SKVRYEDFVKIACAPVPD 147
+ + +F+ + + D
Sbjct: 61 GTIDFPEFLTMMARKMKD 78
>pdb|1OOJ|A Chain A, Structural Genomics Of Caenorhabditis Elegans : Calmodulin
Length = 149
Score = 109 bits (273), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 59/146 (40%), Positives = 89/146 (60%), Gaps = 7/146 (4%)
Query: 1 MAHHFREQDIDEFRECFFLFARNG--TIKTLDELSVIMRSLGMSPTIAELKKYL----AE 54
MA E+ I EF+E F LF ++G TI T EL +MRSLG +PT AEL+ + A+
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITT-KELGTVMRSLGQNPTEAELQDMINEVDAD 59
Query: 55 KGGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSS 114
G + FP+FL +M K D +E+ +AF+ D +G + A L+HV+ N GE L+
Sbjct: 60 GNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTD 119
Query: 115 KEVDQIFREANVTMNSKVRYEDFVKI 140
+EVD++ REA++ + +V YE+FV +
Sbjct: 120 EEVDEMIREADIDGDGQVNYEEFVTM 145
Score = 29.3 bits (64), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 17/78 (21%), Positives = 35/78 (44%), Gaps = 4/78 (5%)
Query: 74 AEDIPKEVVDAFKAA----DTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMN 129
A+ + +E + FK A D GT+ K L V+ + G+ + E+ + E + N
Sbjct: 2 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 61
Query: 130 SKVRYEDFVKIACAPVPD 147
+ + +F+ + + D
Sbjct: 62 GTIDFPEFLTMMARKMKD 79
>pdb|1QTX|A Chain A, The 1.65 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 109 bits (272), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 59/148 (39%), Positives = 90/148 (60%), Gaps = 7/148 (4%)
Query: 2 AHHFREQDIDEFRECFFLFARNG--TIKTLDELSVIMRSLGMSPTIAELKKYL----AEK 55
A ++ I EF+E F LF ++G TI T EL +MRSLG +PT AEL+ + A+
Sbjct: 1 ADQLTDEQIAEFKEAFSLFDKDGDGTITTK-ELGTVMRSLGQNPTEAELQDMINEVDADG 59
Query: 56 GGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSK 115
G + FP+FL +M K D +E+ +AF+ D +G + A L+HV+ N GE L+ +
Sbjct: 60 NGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDE 119
Query: 116 EVDQIFREANVTMNSKVRYEDFVKIACA 143
EVD++ REA+V + +V YE+FV++ A
Sbjct: 120 EVDEMIREADVDGDGQVNYEEFVQVMMA 147
Score = 29.3 bits (64), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 15/68 (22%), Positives = 30/68 (44%)
Query: 80 EVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVK 139
E +AF D GT+ K L V+ + G+ + E+ + E + N + + +F+
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLN 70
Query: 140 IACAPVPD 147
+ + D
Sbjct: 71 LMARKMKD 78
>pdb|2LV6|A Chain A, The Complex Between Ca-calmodulin And Skeletal Muscle
Myosin Light Chain Kinase From Combination Of Nmr And
Aqueous And Contrast-matched Saxs Data
Length = 148
Score = 109 bits (272), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 59/148 (39%), Positives = 89/148 (60%), Gaps = 7/148 (4%)
Query: 2 AHHFREQDIDEFRECFFLFARNG--TIKTLDELSVIMRSLGMSPTIAELKKYL----AEK 55
A E+ I EF+E F LF ++G TI T EL +MRSLG +PT AEL+ + A+
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTK-ELGTVMRSLGQNPTEAELQDMINEVDADG 59
Query: 56 GGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSK 115
G + FP+FL +M K D +E+ +AF+ D +G + A L+HV+ N GE L+ +
Sbjct: 60 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDE 119
Query: 116 EVDQIFREANVTMNSKVRYEDFVKIACA 143
EVD++ REA++ + +V YE+FV + A
Sbjct: 120 EVDEMIREADIDGDGQVNYEEFVTMMTA 147
Score = 28.9 bits (63), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 17/78 (21%), Positives = 35/78 (44%), Gaps = 4/78 (5%)
Query: 74 AEDIPKEVVDAFKAA----DTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMN 129
A+ + +E + FK A D GT+ K L V+ + G+ + E+ + E + N
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 130 SKVRYEDFVKIACAPVPD 147
+ + +F+ + + D
Sbjct: 61 GTIDFPEFLTMMARKMKD 78
>pdb|2VB6|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigor State
( Crystal Form 2)
Length = 149
Score = 108 bits (271), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 58/149 (38%), Positives = 90/149 (60%), Gaps = 7/149 (4%)
Query: 1 MAHHFREQDIDEFRECFFLFARNG--TIKTLDELSVIMRSLGMSPTIAELKKYL----AE 54
MA E+ I EF+E F LF ++G TI T EL +MRSLG +PT AEL+ + A+
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITT-KELGTVMRSLGQNPTEAELQDMINEVDAD 59
Query: 55 KGGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSS 114
G + FP+FL +M K D +E+ +AF+ D +G + A L+HV+ N GE L+
Sbjct: 60 GNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTD 119
Query: 115 KEVDQIFREANVTMNSKVRYEDFVKIACA 143
+EVD++ RE+++ + +V YE+FV + +
Sbjct: 120 EEVDEMIRESDIDGDGQVNYEEFVTMMTS 148
Score = 29.3 bits (64), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 17/78 (21%), Positives = 35/78 (44%), Gaps = 4/78 (5%)
Query: 74 AEDIPKEVVDAFKAA----DTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMN 129
A+ + +E + FK A D GT+ K L V+ + G+ + E+ + E + N
Sbjct: 2 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 61
Query: 130 SKVRYEDFVKIACAPVPD 147
+ + +F+ + + D
Sbjct: 62 GTIDFPEFLTMMARKMKD 79
>pdb|2VAY|A Chain A, Calmodulin Complexed With Cav1.1 Iq Peptide
pdb|2LGF|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
L-Selectin
Length = 146
Score = 108 bits (271), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 58/146 (39%), Positives = 89/146 (60%), Gaps = 7/146 (4%)
Query: 4 HFREQDIDEFRECFFLFARNG--TIKTLDELSVIMRSLGMSPTIAELKKYL----AEKGG 57
E+ I EF+E F LF ++G TI T EL +MRSLG +PT AEL+ + A+ G
Sbjct: 1 QLTEEQIAEFKEAFSLFDKDGDGTITT-KELGTVMRSLGQNPTEAELQDMINEVDADGNG 59
Query: 58 KLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEV 117
+ FP+FL +M K D +E+ +AF+ D +G + A L+HV+ N GE L+ +EV
Sbjct: 60 TIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 119
Query: 118 DQIFREANVTMNSKVRYEDFVKIACA 143
D++ REA++ + +V YE+FV++ A
Sbjct: 120 DEMIREADIDGDGQVNYEEFVQMMTA 145
Score = 28.9 bits (63), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 15/68 (22%), Positives = 30/68 (44%)
Query: 80 EVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVK 139
E +AF D GT+ K L V+ + G+ + E+ + E + N + + +F+
Sbjct: 9 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 68
Query: 140 IACAPVPD 147
+ + D
Sbjct: 69 MMARKMKD 76
>pdb|1CDM|A Chain A, Modulation Of Calmodulin Plasticity In Molecular
Recognition On The Basis Of X-Ray Structures
Length = 144
Score = 108 bits (270), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 58/143 (40%), Positives = 89/143 (62%), Gaps = 7/143 (4%)
Query: 7 EQDIDEFRECFFLFARNG--TIKTLDELSVIMRSLGMSPTIAELKKYL----AEKGGKLS 60
E+ I EF+E F LF ++G TI T EL +MRSLG +PT AEL+ + A+ G +
Sbjct: 3 EEQIAEFKEAFSLFDKDGDGTITT-KELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 61
Query: 61 FPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQI 120
FP+FL +M K D +E+ +AF+ D +G + A L+HV+ N GE L+ +EVD++
Sbjct: 62 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEM 121
Query: 121 FREANVTMNSKVRYEDFVKIACA 143
REA++ + +V YE+FV++ A
Sbjct: 122 IREADIDGDGQVNYEEFVQMMTA 144
Score = 28.9 bits (63), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/68 (22%), Positives = 30/68 (44%)
Query: 80 EVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVK 139
E +AF D GT+ K L V+ + G+ + E+ + E + N + + +F+
Sbjct: 8 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 67
Query: 140 IACAPVPD 147
+ + D
Sbjct: 68 MMARKMKD 75
>pdb|1K93|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
Length = 144
Score = 108 bits (269), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 58/143 (40%), Positives = 89/143 (62%), Gaps = 7/143 (4%)
Query: 7 EQDIDEFRECFFLFARNG--TIKTLDELSVIMRSLGMSPTIAELKKYL----AEKGGKLS 60
E+ I EF+E F LF ++G TI T EL +MRSLG +PT AEL+ + A+ G +
Sbjct: 2 EEQIAEFKEAFSLFDKDGDGTI-TTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 60
Query: 61 FPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQI 120
FP+FL +M K D +E+ +AF+ D +G + A L+HV+ N GE L+ +EVD++
Sbjct: 61 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEM 120
Query: 121 FREANVTMNSKVRYEDFVKIACA 143
REA++ + +V YE+FV++ A
Sbjct: 121 IREADIDGDGQVNYEEFVQMMTA 143
Score = 28.9 bits (63), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 15/68 (22%), Positives = 30/68 (44%)
Query: 80 EVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVK 139
E +AF D GT+ K L V+ + G+ + E+ + E + N + + +F+
Sbjct: 7 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 66
Query: 140 IACAPVPD 147
+ + D
Sbjct: 67 MMARKMKD 74
>pdb|1Y0V|H Chain H, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|I Chain I, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|J Chain J, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|K Chain K, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|L Chain L, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|M Chain M, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
Length = 146
Score = 108 bits (269), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 58/143 (40%), Positives = 89/143 (62%), Gaps = 7/143 (4%)
Query: 7 EQDIDEFRECFFLFARNG--TIKTLDELSVIMRSLGMSPTIAELKKYL----AEKGGKLS 60
E+ I EF+E F LF ++G TI T EL +MRSLG +PT AEL+ + A+ G +
Sbjct: 4 EEQIAEFKEAFSLFDKDGDGTI-TTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 62
Query: 61 FPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQI 120
FP+FL +M K D +E+ +AF+ D +G + A L+HV+ N GE L+ +EVD++
Sbjct: 63 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEM 122
Query: 121 FREANVTMNSKVRYEDFVKIACA 143
REA++ + +V YE+FV++ A
Sbjct: 123 IREADIDGDGQVNYEEFVQMMTA 145
Score = 28.5 bits (62), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/68 (22%), Positives = 30/68 (44%)
Query: 80 EVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVK 139
E +AF D GT+ K L V+ + G+ + E+ + E + N + + +F+
Sbjct: 9 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 68
Query: 140 IACAPVPD 147
+ + D
Sbjct: 69 MMARKMKD 76
>pdb|2BBM|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|2BBN|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|1MXE|A Chain A, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|1MXE|B Chain B, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|4CLN|A Chain A, Structure Of A Recombinant Calmodulin From Drosophila
Melanogaster Refined At 2.2-Angstroms Resolution
Length = 148
Score = 107 bits (268), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 58/148 (39%), Positives = 89/148 (60%), Gaps = 7/148 (4%)
Query: 2 AHHFREQDIDEFRECFFLFARNG--TIKTLDELSVIMRSLGMSPTIAELKKYL----AEK 55
A E+ I EF+E F LF ++G TI T EL +MRSLG +PT AEL+ + A+
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTK-ELGTVMRSLGQNPTEAELQDMINEVDADG 59
Query: 56 GGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSK 115
G + FP+FL +M K D +E+ +AF+ D +G + A L+HV+ N GE L+ +
Sbjct: 60 NGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDE 119
Query: 116 EVDQIFREANVTMNSKVRYEDFVKIACA 143
EVD++ REA++ + +V YE+FV + +
Sbjct: 120 EVDEMIREADIDGDGQVNYEEFVTMMTS 147
Score = 28.9 bits (63), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 17/78 (21%), Positives = 35/78 (44%), Gaps = 4/78 (5%)
Query: 74 AEDIPKEVVDAFKAA----DTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMN 129
A+ + +E + FK A D GT+ K L V+ + G+ + E+ + E + N
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 130 SKVRYEDFVKIACAPVPD 147
+ + +F+ + + D
Sbjct: 61 GTIDFPEFLTMMARKMKD 78
>pdb|1VRK|A Chain A, The 1.9 Angstrom Structure Of E84k-Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 107 bits (266), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 58/148 (39%), Positives = 90/148 (60%), Gaps = 7/148 (4%)
Query: 2 AHHFREQDIDEFRECFFLFARNG--TIKTLDELSVIMRSLGMSPTIAELKKYL----AEK 55
A ++ I EF+E F LF ++G TI T EL +MRSLG +PT AEL+ + A+
Sbjct: 1 ADQLTDEQIAEFKEAFSLFDKDGDGTITT-KELGTVMRSLGQNPTEAELQDMINEVDADG 59
Query: 56 GGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSK 115
G + FP+FL +M K D +++ +AF+ D +G + A L+HV+ N GE L+ +
Sbjct: 60 NGTIDFPEFLNLMARKMKDTDSEEKLKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDE 119
Query: 116 EVDQIFREANVTMNSKVRYEDFVKIACA 143
EVD++ REA+V + +V YE+FV++ A
Sbjct: 120 EVDEMIREADVDGDGQVNYEEFVQVMMA 147
Score = 29.3 bits (64), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 15/68 (22%), Positives = 30/68 (44%)
Query: 80 EVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVK 139
E +AF D GT+ K L V+ + G+ + E+ + E + N + + +F+
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLN 70
Query: 140 IACAPVPD 147
+ + D
Sbjct: 71 LMARKMKD 78
>pdb|2IX7|A Chain A, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
pdb|2IX7|B Chain B, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
Length = 145
Score = 107 bits (266), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 57/143 (39%), Positives = 88/143 (61%), Gaps = 7/143 (4%)
Query: 4 HFREQDIDEFRECFFLFARNG--TIKTLDELSVIMRSLGMSPTIAELKKYL----AEKGG 57
E+ I EF+E F LF ++G TI T EL +MRSLG +PT AEL+ + A+ G
Sbjct: 2 QLTEEQIAEFKEAFSLFDKDGDGTITTK-ELGTVMRSLGQNPTEAELQDMINEVDADGNG 60
Query: 58 KLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEV 117
+ FP+FL +M K D +E+ +AF+ D +G + A L+HV+ N GE L+ +EV
Sbjct: 61 TIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 120
Query: 118 DQIFREANVTMNSKVRYEDFVKI 140
D++ REA++ + +V YE+FV++
Sbjct: 121 DEMIREADIDGDGQVNYEEFVQM 143
Score = 28.9 bits (63), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/68 (22%), Positives = 30/68 (44%)
Query: 80 EVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVK 139
E +AF D GT+ K L V+ + G+ + E+ + E + N + + +F+
Sbjct: 10 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 69
Query: 140 IACAPVPD 147
+ + D
Sbjct: 70 MMARKMKD 77
>pdb|1QS7|A Chain A, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
pdb|1QS7|C Chain C, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 145
Score = 107 bits (266), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 58/143 (40%), Positives = 89/143 (62%), Gaps = 7/143 (4%)
Query: 7 EQDIDEFRECFFLFARNG--TIKTLDELSVIMRSLGMSPTIAELKKYL----AEKGGKLS 60
++ I EF+E F LF ++G TI T EL +MRSLG +PT AEL+ + A+ G +
Sbjct: 3 DEQIAEFKEAFSLFDKDGDGTITT-KELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 61
Query: 61 FPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQI 120
FP+FL +M K D +E+ +AF+ D +G + A L+HV+ N GE L+ +EVD++
Sbjct: 62 FPEFLNLMARKMKDTDSEEELKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEM 121
Query: 121 FREANVTMNSKVRYEDFVKIACA 143
REA+V + +V YE+FV++ A
Sbjct: 122 IREADVDGDGQVNYEEFVQVMMA 144
Score = 29.3 bits (64), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 15/68 (22%), Positives = 30/68 (44%)
Query: 80 EVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVK 139
E +AF D GT+ K L V+ + G+ + E+ + E + N + + +F+
Sbjct: 8 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLN 67
Query: 140 IACAPVPD 147
+ + D
Sbjct: 68 LMARKMKD 75
>pdb|4GOW|D Chain D, Crystal Structure Of Ca2+CAM:KV7.4 (KCNQ4) B HELIX COMPLEX
Length = 144
Score = 107 bits (266), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 57/143 (39%), Positives = 88/143 (61%), Gaps = 7/143 (4%)
Query: 4 HFREQDIDEFRECFFLFARNG--TIKTLDELSVIMRSLGMSPTIAELKKYL----AEKGG 57
E+ I EF+E F LF ++G TI T EL +MRSLG +PT AEL+ + A+ G
Sbjct: 1 QLTEEQIAEFKEAFSLFDKDGDGTITT-KELGTVMRSLGQNPTEAELQDMINEVDADGNG 59
Query: 58 KLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEV 117
+ FP+FL +M K D +E+ +AF+ D +G + A L+HV+ N GE L+ +EV
Sbjct: 60 TIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 119
Query: 118 DQIFREANVTMNSKVRYEDFVKI 140
D++ REA++ + +V YE+FV++
Sbjct: 120 DEMIREADIDGDGQVNYEEFVQM 142
Score = 28.9 bits (63), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/68 (22%), Positives = 30/68 (44%)
Query: 80 EVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVK 139
E +AF D GT+ K L V+ + G+ + E+ + E + N + + +F+
Sbjct: 9 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 68
Query: 140 IACAPVPD 147
+ + D
Sbjct: 69 MMARKMKD 76
>pdb|3SG6|A Chain A, Crystal Structure Of Dimeric Gcamp2-Lia(Linker 1)
Length = 450
Score = 107 bits (266), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 58/146 (39%), Positives = 89/146 (60%), Gaps = 7/146 (4%)
Query: 4 HFREQDIDEFRECFFLFARNG--TIKTLDELSVIMRSLGMSPTIAELKKYL----AEKGG 57
E+ I EF+E F LF ++G TI T EL +MRSLG +PT AEL+ + A+ G
Sbjct: 305 QLTEEQIAEFKEAFSLFDKDGDGTITT-KELGTVMRSLGQNPTEAELQDMINEVDADGNG 363
Query: 58 KLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEV 117
+ FP+FL +M K D +E+ +AF+ D +G + A L+HV+ N GE L+ +EV
Sbjct: 364 TIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 423
Query: 118 DQIFREANVTMNSKVRYEDFVKIACA 143
D++ REA++ + +V YE+FV++ A
Sbjct: 424 DEMIREADIDGDGQVNYEEFVQMMTA 449
Score = 28.9 bits (63), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 15/68 (22%), Positives = 30/68 (44%)
Query: 80 EVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVK 139
E +AF D GT+ K L V+ + G+ + E+ + E + N + + +F+
Sbjct: 313 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 372
Query: 140 IACAPVPD 147
+ + D
Sbjct: 373 MMARKMKD 380
>pdb|3EK8|A Chain A, Calcium-Saturated Gcamp2 T116vG87R MUTANT MONOMER
Length = 449
Score = 107 bits (266), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 58/146 (39%), Positives = 89/146 (60%), Gaps = 7/146 (4%)
Query: 4 HFREQDIDEFRECFFLFARNG--TIKTLDELSVIMRSLGMSPTIAELKKYL----AEKGG 57
E+ I EF+E F LF ++G TI T EL +MRSLG +PT AEL+ + A+ G
Sbjct: 304 QLTEEQIAEFKEAFSLFDKDGDGTITT-KELGTVMRSLGQNPTEAELQDMINEVDADGNG 362
Query: 58 KLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEV 117
+ FP+FL +M K D +E+ +AF+ D +G + A L+HV+ N GE L+ +EV
Sbjct: 363 TIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 422
Query: 118 DQIFREANVTMNSKVRYEDFVKIACA 143
D++ REA++ + +V YE+FV++ A
Sbjct: 423 DEMIREADIDGDGQVNYEEFVQMMTA 448
Score = 29.3 bits (64), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 15/68 (22%), Positives = 30/68 (44%)
Query: 80 EVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVK 139
E +AF D GT+ K L V+ + G+ + E+ + E + N + + +F+
Sbjct: 312 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 371
Query: 140 IACAPVPD 147
+ + D
Sbjct: 372 MMARKMKD 379
>pdb|3EVU|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2, (#1)
pdb|3EVV|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2 (#2)
pdb|3EK4|A Chain A, Calcium-Saturated Gcamp2 Monomer
pdb|3EK7|A Chain A, Calcium-Saturated Gcamp2 Dimer
Length = 449
Score = 107 bits (266), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 58/146 (39%), Positives = 89/146 (60%), Gaps = 7/146 (4%)
Query: 4 HFREQDIDEFRECFFLFARNG--TIKTLDELSVIMRSLGMSPTIAELKKYL----AEKGG 57
E+ I EF+E F LF ++G TI T EL +MRSLG +PT AEL+ + A+ G
Sbjct: 304 QLTEEQIAEFKEAFSLFDKDGDGTITT-KELGTVMRSLGQNPTEAELQDMINEVDADGNG 362
Query: 58 KLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEV 117
+ FP+FL +M K D +E+ +AF+ D +G + A L+HV+ N GE L+ +EV
Sbjct: 363 TIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 422
Query: 118 DQIFREANVTMNSKVRYEDFVKIACA 143
D++ REA++ + +V YE+FV++ A
Sbjct: 423 DEMIREADIDGDGQVNYEEFVQMMTA 448
Score = 29.3 bits (64), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 15/68 (22%), Positives = 30/68 (44%)
Query: 80 EVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVK 139
E +AF D GT+ K L V+ + G+ + E+ + E + N + + +F+
Sbjct: 312 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 371
Query: 140 IACAPVPD 147
+ + D
Sbjct: 372 MMARKMKD 379
>pdb|3EVR|A Chain A, Crystal Structure Of Calcium Bound Monomeric Gcamp2
Length = 411
Score = 106 bits (265), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 58/146 (39%), Positives = 89/146 (60%), Gaps = 7/146 (4%)
Query: 4 HFREQDIDEFRECFFLFARNG--TIKTLDELSVIMRSLGMSPTIAELKKYL----AEKGG 57
E+ I EF+E F LF ++G TI T EL +MRSLG +PT AEL+ + A+ G
Sbjct: 267 QLTEEQIAEFKEAFSLFDKDGDGTITT-KELGTVMRSLGQNPTEAELQDMINEVDADGNG 325
Query: 58 KLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEV 117
+ FP+FL +M K D +E+ +AF+ D +G + A L+HV+ N GE L+ +EV
Sbjct: 326 TIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 385
Query: 118 DQIFREANVTMNSKVRYEDFVKIACA 143
D++ REA++ + +V YE+FV++ A
Sbjct: 386 DEMIREADIDGDGQVNYEEFVQMMTA 411
Score = 29.3 bits (64), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 15/68 (22%), Positives = 30/68 (44%)
Query: 80 EVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVK 139
E +AF D GT+ K L V+ + G+ + E+ + E + N + + +F+
Sbjct: 275 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 334
Query: 140 IACAPVPD 147
+ + D
Sbjct: 335 MMARKMKD 342
>pdb|3SG2|A Chain A, Crystal Structure Of Gcamp2-T116v,D381y
Length = 449
Score = 106 bits (265), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 58/146 (39%), Positives = 89/146 (60%), Gaps = 7/146 (4%)
Query: 4 HFREQDIDEFRECFFLFARNG--TIKTLDELSVIMRSLGMSPTIAELKKYL----AEKGG 57
E+ I EF+E F LF ++G TI T EL +MRSLG +PT AEL+ + A+ G
Sbjct: 304 QLTEEQIAEFKEAFSLFDKDGDGTITT-KELGTVMRSLGQNPTEAELQDMINEVDADGNG 362
Query: 58 KLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEV 117
+ FP+FL +M K D +E+ +AF+ D +G + A L+HV+ N GE L+ +EV
Sbjct: 363 TIDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 422
Query: 118 DQIFREANVTMNSKVRYEDFVKIACA 143
D++ REA++ + +V YE+FV++ A
Sbjct: 423 DEMIREADIDGDGQVNYEEFVQMMTA 448
>pdb|3O77|A Chain A, The Structure Of Ca2+ Sensor (Case-16)
Length = 415
Score = 106 bits (265), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 58/146 (39%), Positives = 89/146 (60%), Gaps = 7/146 (4%)
Query: 4 HFREQDIDEFRECFFLFARNG--TIKTLDELSVIMRSLGMSPTIAELKKYL----AEKGG 57
E+ I EF+E F LF ++G TI T EL +MRSLG +PT AEL+ + A+ G
Sbjct: 270 QLTEEQIAEFKEAFSLFDKDGDGTITT-KELGTVMRSLGQNPTEAELQDMINEVDADGNG 328
Query: 58 KLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEV 117
+ FP+FL +M K D +E+ +AF+ D +G + A L+HV+ N GE L+ +EV
Sbjct: 329 TIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 388
Query: 118 DQIFREANVTMNSKVRYEDFVKIACA 143
D++ REA++ + +V YE+FV++ A
Sbjct: 389 DEMIREADIDGDGQVNYEEFVQMMTA 414
Score = 28.9 bits (63), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 15/68 (22%), Positives = 30/68 (44%)
Query: 80 EVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVK 139
E +AF D GT+ K L V+ + G+ + E+ + E + N + + +F+
Sbjct: 278 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 337
Query: 140 IACAPVPD 147
+ + D
Sbjct: 338 MMARKMKD 345
>pdb|1DEG|A Chain A, The Linker Of Des-Glu84 Calmodulin Is Bent As Seen In The
Crystal Structure
Length = 142
Score = 106 bits (265), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 59/143 (41%), Positives = 89/143 (62%), Gaps = 8/143 (5%)
Query: 7 EQDIDEFRECFFLFARNG--TIKTLDELSVIMRSLGMSPTIAELKKYL----AEKGGKLS 60
E+ I EF+E F LF ++G TI T EL +MRSLG +PT AEL+ + A+ G +
Sbjct: 2 EEQIAEFKEAFSLFDKDGDGTITT-KELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 60
Query: 61 FPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQI 120
FP+FL +M K D +E+ +AF+ D +G + A L+HV+ N GE L+ +EVD++
Sbjct: 61 FPEFLTMMARKMKDTD-SEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEM 119
Query: 121 FREANVTMNSKVRYEDFVKIACA 143
REAN+ + +V YE+FV++ A
Sbjct: 120 IREANIDGDGQVNYEEFVQMMTA 142
Score = 28.9 bits (63), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 15/68 (22%), Positives = 30/68 (44%)
Query: 80 EVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVK 139
E +AF D GT+ K L V+ + G+ + E+ + E + N + + +F+
Sbjct: 7 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 66
Query: 140 IACAPVPD 147
+ + D
Sbjct: 67 MMARKMKD 74
>pdb|3O78|A Chain A, The Structure Of Ca2+ Sensor (Case-12)
pdb|3O78|B Chain B, The Structure Of Ca2+ Sensor (Case-12)
Length = 415
Score = 106 bits (265), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 58/146 (39%), Positives = 89/146 (60%), Gaps = 7/146 (4%)
Query: 4 HFREQDIDEFRECFFLFARNG--TIKTLDELSVIMRSLGMSPTIAELKKYL----AEKGG 57
E+ I EF+E F LF ++G TI T EL +MRSLG +PT AEL+ + A+ G
Sbjct: 270 QLTEEQIAEFKEAFSLFDKDGDGTITT-KELGTVMRSLGQNPTEAELQDMINEVDADGNG 328
Query: 58 KLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEV 117
+ FP+FL +M K D +E+ +AF+ D +G + A L+HV+ N GE L+ +EV
Sbjct: 329 TIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 388
Query: 118 DQIFREANVTMNSKVRYEDFVKIACA 143
D++ REA++ + +V YE+FV++ A
Sbjct: 389 DEMIREADIDGDGQVNYEEFVQMMTA 414
Score = 28.9 bits (63), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 15/68 (22%), Positives = 30/68 (44%)
Query: 80 EVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVK 139
E +AF D GT+ K L V+ + G+ + E+ + E + N + + +F+
Sbjct: 278 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 337
Query: 140 IACAPVPD 147
+ + D
Sbjct: 338 MMARKMKD 345
>pdb|3EKH|A Chain A, Calcium-Saturated Gcamp2 T116vK378W MUTANT MONOMER
Length = 449
Score = 106 bits (264), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 58/146 (39%), Positives = 89/146 (60%), Gaps = 7/146 (4%)
Query: 4 HFREQDIDEFRECFFLFARNG--TIKTLDELSVIMRSLGMSPTIAELKKYL----AEKGG 57
E+ I EF+E F LF ++G TI T EL +MRSLG +PT AEL+ + A+ G
Sbjct: 304 QLTEEQIAEFKEAFSLFDKDGDGTITT-KELGTVMRSLGQNPTEAELQDMINEVDADGNG 362
Query: 58 KLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEV 117
+ FP+FL +M K D +E+ +AF+ D +G + A L+HV+ N GE L+ +EV
Sbjct: 363 TIDFPEFLTMMARWMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 422
Query: 118 DQIFREANVTMNSKVRYEDFVKIACA 143
D++ REA++ + +V YE+FV++ A
Sbjct: 423 DEMIREADIDGDGQVNYEEFVQMMTA 448
>pdb|3SG7|A Chain A, Crystal Structure Of Gcamp3-Kf(Linker 1)
Length = 448
Score = 106 bits (264), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 58/146 (39%), Positives = 89/146 (60%), Gaps = 7/146 (4%)
Query: 4 HFREQDIDEFRECFFLFARNG--TIKTLDELSVIMRSLGMSPTIAELKKYL----AEKGG 57
E+ I EF+E F LF ++G TI T EL +MRSLG +PT AEL+ + A+ G
Sbjct: 303 QLTEEQIAEFKEAFSLFDKDGDGTI-TTKELGTVMRSLGQNPTEAELQDMINEVDADGDG 361
Query: 58 KLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEV 117
+ FP+FL +M K D +E+ +AF+ D +G + A L+HV+ N GE L+ +EV
Sbjct: 362 TIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 421
Query: 118 DQIFREANVTMNSKVRYEDFVKIACA 143
D++ REA++ + +V YE+FV++ A
Sbjct: 422 DEMIREADIDGDGQVNYEEFVQMMTA 447
Score = 26.9 bits (58), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 14/68 (20%), Positives = 30/68 (44%)
Query: 80 EVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVK 139
E +AF D GT+ K L V+ + G+ + E+ + E + + + + +F+
Sbjct: 311 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLT 370
Query: 140 IACAPVPD 147
+ + D
Sbjct: 371 MMARKMKD 378
>pdb|3SG3|A Chain A, Crystal Structure Of Gcamp3-D380y
Length = 449
Score = 106 bits (264), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 58/146 (39%), Positives = 89/146 (60%), Gaps = 7/146 (4%)
Query: 4 HFREQDIDEFRECFFLFARNG--TIKTLDELSVIMRSLGMSPTIAELKKYL----AEKGG 57
E+ I EF+E F LF ++G TI T EL +MRSLG +PT AEL+ + A+ G
Sbjct: 304 QLTEEQIAEFKEAFSLFDKDGDGTITT-KELGTVMRSLGQNPTEAELQDMINEVDADGDG 362
Query: 58 KLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEV 117
+ FP+FL +M K D +E+ +AF+ D +G + A L+HV+ N GE L+ +EV
Sbjct: 363 TIDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 422
Query: 118 DQIFREANVTMNSKVRYEDFVKIACA 143
D++ REA++ + +V YE+FV++ A
Sbjct: 423 DEMIREADIDGDGQVNYEEFVQMMTA 448
>pdb|3SG4|A Chain A, Crystal Structure Of Gcamp3-D380y, Lp(Linker 2)
Length = 448
Score = 106 bits (264), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 58/149 (38%), Positives = 90/149 (60%), Gaps = 7/149 (4%)
Query: 1 MAHHFREQDIDEFRECFFLFARNG--TIKTLDELSVIMRSLGMSPTIAELKKYL----AE 54
+ E+ I EF+E F LF ++G TI T EL +MRSLG +PT AEL+ + A+
Sbjct: 300 LPDQLTEEQIAEFKEAFSLFDKDGDGTITT-KELGTVMRSLGQNPTEAELQDMINEVDAD 358
Query: 55 KGGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSS 114
G + FP+FL +M K D +E+ +AF+ D +G + A L+HV+ N GE L+
Sbjct: 359 GDGTIDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTD 418
Query: 115 KEVDQIFREANVTMNSKVRYEDFVKIACA 143
+EVD++ REA++ + +V YE+FV++ A
Sbjct: 419 EEVDEMIREADIDGDGQVNYEEFVQMMTA 447
>pdb|3SG5|A Chain A, Crystal Structure Of Dimeric Gcamp3-D380y, Qp(Linker 1),
Lp(Linker 2)
Length = 448
Score = 106 bits (264), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 58/149 (38%), Positives = 90/149 (60%), Gaps = 7/149 (4%)
Query: 1 MAHHFREQDIDEFRECFFLFARNG--TIKTLDELSVIMRSLGMSPTIAELKKYL----AE 54
+ E+ I EF+E F LF ++G TI T EL +MRSLG +PT AEL+ + A+
Sbjct: 300 LPDQLTEEQIAEFKEAFSLFDKDGDGTITT-KELGTVMRSLGQNPTEAELQDMINEVDAD 358
Query: 55 KGGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSS 114
G + FP+FL +M K D +E+ +AF+ D +G + A L+HV+ N GE L+
Sbjct: 359 GDGTIDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTD 418
Query: 115 KEVDQIFREANVTMNSKVRYEDFVKIACA 143
+EVD++ REA++ + +V YE+FV++ A
Sbjct: 419 EEVDEMIREADIDGDGQVNYEEFVQMMTA 447
>pdb|3U0K|A Chain A, Crystal Structure Of The Genetically Encoded Calcium
Indicator Rcamp
Length = 440
Score = 105 bits (261), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 58/146 (39%), Positives = 89/146 (60%), Gaps = 7/146 (4%)
Query: 4 HFREQDIDEFRECFFLFARNG--TIKTLDELSVIMRSLGMSPTIAELKKYL----AEKGG 57
E+ I EF+E F LF ++G TI T EL +MRSLG +PT AEL+ + A+ G
Sbjct: 295 QLTEEQIAEFKEAFSLFDKDGDGTI-TTKELGTVMRSLGQNPTEAELQDMINEVDADGDG 353
Query: 58 KLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEV 117
+ FP+FL +M K D +E+ +AF+ D +G + A L+HV+ N GE L+ +EV
Sbjct: 354 TIDFPEFLIMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 413
Query: 118 DQIFREANVTMNSKVRYEDFVKIACA 143
D++ REA++ + +V YE+FV++ A
Sbjct: 414 DEMIREADIDGDGQVNYEEFVQMMTA 439
Score = 27.7 bits (60), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/98 (20%), Positives = 42/98 (42%), Gaps = 9/98 (9%)
Query: 59 LSFPDFLKVMHTHSKA-----EDIPKEVVDAFKAA----DTTKSGTVPAKYLKHVLVNWG 109
++FP VM +K + + +E + FK A D GT+ K L V+ + G
Sbjct: 273 VNFPSNGAVMQKKTKGWEPTRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLG 332
Query: 110 EGLSSKEVDQIFREANVTMNSKVRYEDFVKIACAPVPD 147
+ + E+ + E + + + + +F+ + + D
Sbjct: 333 QNPTEAELQDMINEVDADGDGTIDFPEFLIMMARKMKD 370
>pdb|1AHR|A Chain A, Calmodulin Mutant With A Two Residue Deletion In The
Central Helix
Length = 146
Score = 104 bits (260), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 58/148 (39%), Positives = 90/148 (60%), Gaps = 9/148 (6%)
Query: 2 AHHFREQDIDEFRECFFLFARNG--TIKTLDELSVIMRSLGMSPTIAELKKYL----AEK 55
A E+ I EF+E F LF ++G TI T EL +MRSLG +PT AEL+ + A+
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITT-KELGTVMRSLGQNPTEAELQDMINEVDADG 59
Query: 56 GGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSK 115
G + FP+FL +M K +D +E+ +AF+ D +G + A L+HV+ N GE L+ +
Sbjct: 60 NGTIDFPEFLTMMA--RKMKDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDE 117
Query: 116 EVDQIFREANVTMNSKVRYEDFVKIACA 143
EVD++ REA++ + +V YE+FV + +
Sbjct: 118 EVDEMIREADIDGDGQVNYEEFVTMMTS 145
Score = 29.3 bits (64), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 17/78 (21%), Positives = 35/78 (44%), Gaps = 4/78 (5%)
Query: 74 AEDIPKEVVDAFKAA----DTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMN 129
A+ + +E + FK A D GT+ K L V+ + G+ + E+ + E + N
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 130 SKVRYEDFVKIACAPVPD 147
+ + +F+ + + D
Sbjct: 61 GTIDFPEFLTMMARKMKD 78
>pdb|1XFX|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 103 bits (256), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 58/148 (39%), Positives = 84/148 (56%), Gaps = 7/148 (4%)
Query: 2 AHHFREQDIDEFRECFFLFARNG--TIKTLDELSVIMRSLGMSPTIAELKKYL----AEK 55
A E+ I EF+E F LF ++G TI T EL + RSLG +PT AEL+ + A+
Sbjct: 2 ADQLTEEQIAEFKEAFSLFDKDGDGTITTK-ELGTVXRSLGQNPTEAELQDXINEVDADG 60
Query: 56 GGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSK 115
G + FP+FL K D +E+ +AF+ D +G + A L+HV N GE L+ +
Sbjct: 61 NGTIDFPEFLTXXARKXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDE 120
Query: 116 EVDQIFREANVTMNSKVRYEDFVKIACA 143
EVDQ REA++ + +V YE+FV+ A
Sbjct: 121 EVDQXIREADIDGDGQVNYEEFVQXXTA 148
>pdb|1GGZ|A Chain A, Crystal Structure Of The Calmodulin-Like Protein (Hclp)
From Human Epithelial Cells
Length = 148
Score = 102 bits (255), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 55/144 (38%), Positives = 84/144 (58%), Gaps = 5/144 (3%)
Query: 2 AHHFREQDIDEFRECFFLFARNGT-IKTLDELSVIMRSLGMSPTIAELKKYLAE----KG 56
A E+ + EF+E F LF ++G T EL +MRSLG +PT AEL+ ++E
Sbjct: 1 ADQLTEEQVTEFKEAFSLFDKDGDGCITTRELGTVMRSLGQNPTEAELRDMMSEIDRDGN 60
Query: 57 GKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKE 116
G + FP+FL +M K D +E+ +AF+ D +G V A L+HV+ GE LS +E
Sbjct: 61 GTVDFPEFLGMMARKMKDTDNEEEIREAFRVFDKDGNGFVSAAELRHVMTRLGEKLSDEE 120
Query: 117 VDQIFREANVTMNSKVRYEDFVKI 140
VD++ R A+ + +V YE+FV++
Sbjct: 121 VDEMIRAADTDGDGQVNYEEFVRV 144
>pdb|3EKJ|A Chain A, Calcium-Free Gcamp2 (Calcium Binding Deficient Mutant)
Length = 449
Score = 102 bits (254), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 55/145 (37%), Positives = 83/145 (57%), Gaps = 5/145 (3%)
Query: 4 HFREQDIDEFRECFFLFARNGTIK-TLDELSVIMRSLGMSPTIAELKKYLAEKG----GK 58
E+ I EF+E F LF ++G T +L +MRSLG +PT AEL+ + E G G
Sbjct: 304 QLTEEQIAEFKEAFSLFDKDGDGGITTKQLGTVMRSLGQNPTEAELQDMINEVGADGNGT 363
Query: 59 LSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVD 118
+ FP FL +M K D +E+ +AF+ +G + A L+HV+ N GE L+ +EVD
Sbjct: 364 IDFPQFLTMMARKMKDTDSEEEIREAFRVFGKDGNGYISAAQLRHVMTNLGEKLTDEEVD 423
Query: 119 QIFREANVTMNSKVRYEDFVKIACA 143
++ REA + + +V YE FV++ A
Sbjct: 424 EMIREAGIDGDGQVNYEQFVQMMTA 448
>pdb|1NIW|A Chain A, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|C Chain C, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|E Chain E, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|G Chain G, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1QX7|I Chain I, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|R Chain R, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|A Chain A, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|B Chain B, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|M Chain M, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
Length = 148
Score = 101 bits (251), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 57/148 (38%), Positives = 84/148 (56%), Gaps = 7/148 (4%)
Query: 2 AHHFREQDIDEFRECFFLFARNG--TIKTLDELSVIMRSLGMSPTIAELKKYL----AEK 55
A E+ I EF+E F LF ++G TI T EL + RSLG +PT AEL+ + A+
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTK-ELGTVXRSLGQNPTEAELQDXINEVDADG 59
Query: 56 GGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSK 115
G + FP+FL K D +E+ +AF+ D +G + A L+HV N GE L+ +
Sbjct: 60 NGTIDFPEFLTXXARKXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDE 119
Query: 116 EVDQIFREANVTMNSKVRYEDFVKIACA 143
EVD+ REA++ + +V YE+FV+ A
Sbjct: 120 EVDEXIREADIDGDGQVNYEEFVQXXTA 147
>pdb|1Y6W|A Chain A, Trapped Intermediate Of Calmodulin
Length = 148
Score = 100 bits (248), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 57/148 (38%), Positives = 85/148 (57%), Gaps = 7/148 (4%)
Query: 2 AHHFREQDIDEFRECFFLFARNG--TIKTLDELSVIMRSLGMSPTIAELKKYL----AEK 55
A E+ I EF+E F LF ++G TI T EL + RSLG +PT AEL+ + A+
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTK-ELGTVXRSLGCNPTEAELQDXINEVDADG 59
Query: 56 GGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSK 115
G ++FP+FL K D +E+ +AF+ D +G + A L+HV N GE L+ +
Sbjct: 60 NGTINFPEFLTXXARCXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDE 119
Query: 116 EVDQIFREANVTMNSKVRYEDFVKIACA 143
EVD+ REA++ + +V YE+FV+ A
Sbjct: 120 EVDEXIREADIDGDGQVNYEEFVQXXTA 147
>pdb|2L1W|A Chain A, The Solution Structure Of Soybean Calmodulin Isoform 4
Complexed With The Vacuolar Calcium Atpase Bca1 Peptide
Length = 149
Score = 98.2 bits (243), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 52/144 (36%), Positives = 89/144 (61%), Gaps = 5/144 (3%)
Query: 2 AHHFREQDIDEFRECFFLFARNGT-IKTLDELSVIMRSLGMSPTIAELKKYLAE----KG 56
A E+ I +F+E F LF ++G T++EL+ ++RSL +PT EL+ ++E
Sbjct: 1 ADILSEEQIVDFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGN 60
Query: 57 GKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKE 116
G + F +FL +M K D +E+ +AFK D ++G + A L+HV++N GE L+ +E
Sbjct: 61 GTIEFDEFLSLMAKKVKDTDAEEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEE 120
Query: 117 VDQIFREANVTMNSKVRYEDFVKI 140
V+Q+ +EA++ + +V YE+FVK+
Sbjct: 121 VEQMIKEADLDGDGQVNYEEFVKM 144
>pdb|2LMT|A Chain A, Nmr Structure Of Androcam
pdb|2LMU|A Chain A, Androcam At High Calcium
pdb|2LMV|A Chain A, Androcam At High Calcium With Three Explicit Ca2+
Length = 148
Score = 90.1 bits (222), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 79/137 (57%), Gaps = 5/137 (3%)
Query: 7 EQDIDEFRECFFLFARNGTIK-TLDELSVIMRSLGMSPTIAELKKYLAE----KGGKLSF 61
E+ I EF++ F F + GT K EL +MR+LG +PT AEL+ +AE G+L+F
Sbjct: 6 EEQIAEFKDAFVQFDKEGTGKIATRELGTLMRTLGQNPTEAELQDLIAEAENNNNGQLNF 65
Query: 62 PDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIF 121
+F +M + D +E+ +AFK D G + L+ V++N GE ++ +E+D++
Sbjct: 66 TEFCGIMAKQMRETDTEEEMREAFKIFDRDGDGFISPAELRFVMINLGEKVTDEEIDEMI 125
Query: 122 REANVTMNSKVRYEDFV 138
REA+ + + YE+FV
Sbjct: 126 READFDGDGMINYEEFV 142
>pdb|1LKJ|A Chain A, Nmr Structure Of Apo Calmodulin From Yeast Saccharomyces
Cerevisiae
Length = 146
Score = 89.0 bits (219), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/128 (38%), Positives = 75/128 (58%), Gaps = 7/128 (5%)
Query: 2 AHHFREQDIDEFRECFFLFAR--NGTIKTLDELSVIMRSLGMSPTIAELKKYLAE----K 55
+ + E+ I EF+E F LF + NG+I + EL+ +MRSLG+SP+ AE+ + E
Sbjct: 1 SSNLTEEQIAEFKEAFALFDKDNNGSISS-SELATVMRSLGLSPSEAEVNDLMNEIDVDG 59
Query: 56 GGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSK 115
++ F +FL +M K+ D +E+++AFK D G + A LKHVL + GE L+
Sbjct: 60 NHQIEFSEFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDA 119
Query: 116 EVDQIFRE 123
EVD + RE
Sbjct: 120 EVDDMLRE 127
>pdb|2LHI|A Chain A, Solution Structure Of Ca2+CNA1 PEPTIDE-Bound Ycam
Length = 176
Score = 88.6 bits (218), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/128 (38%), Positives = 75/128 (58%), Gaps = 7/128 (5%)
Query: 2 AHHFREQDIDEFRECFFLFAR--NGTIKTLDELSVIMRSLGMSPTIAELKKYLAE----K 55
+ + E+ I EF+E F LF + NG+I + EL+ +MRSLG+SP+ AE+ + E
Sbjct: 2 SSNLTEEQIAEFKEAFALFDKDNNGSISS-SELATVMRSLGLSPSEAEVNDLMNEIDVDG 60
Query: 56 GGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSK 115
++ F +FL +M K+ D +E+++AFK D G + A LKHVL + GE L+
Sbjct: 61 NHQIEFSEFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDA 120
Query: 116 EVDQIFRE 123
EVD + RE
Sbjct: 121 EVDDMLRE 128
>pdb|4DS7|A Chain A, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|B Chain B, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|C Chain C, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|D Chain D, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
Length = 147
Score = 87.8 bits (216), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 49/129 (37%), Positives = 75/129 (58%), Gaps = 7/129 (5%)
Query: 1 MAHHFREQDIDEFRECFFLFARN--GTIKTLDELSVIMRSLGMSPTIAELKKYLAE---- 54
M+ + E+ I EF+E F LF ++ G+I + EL+ +MRSLG+SP+ AE+ + E
Sbjct: 1 MSQNLTEEQIAEFKEAFALFDKDNSGSI-SASELATVMRSLGLSPSEAEVADLMNEIDVD 59
Query: 55 KGGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSS 114
+ F +FL +M K D +E+++AFK D G + A LKHVL + GE L+
Sbjct: 60 GNHAIEFSEFLALMSRQLKCNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTD 119
Query: 115 KEVDQIFRE 123
EVD++ RE
Sbjct: 120 AEVDEMLRE 128
Score = 30.4 bits (67), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 35/71 (49%), Gaps = 4/71 (5%)
Query: 74 AEDIPKEVVDAFKAA----DTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMN 129
++++ +E + FK A D SG++ A L V+ + G S EV + E +V N
Sbjct: 2 SQNLTEEQIAEFKEAFALFDKDNSGSISASELATVMRSLGLSPSEAEVADLMNEIDVDGN 61
Query: 130 SKVRYEDFVKI 140
+ + +F+ +
Sbjct: 62 HAIEFSEFLAL 72
>pdb|2OBH|A Chain A, Centrin-Xpc Peptide
pdb|2OBH|B Chain B, Centrin-Xpc Peptide
Length = 143
Score = 81.6 bits (200), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/140 (37%), Positives = 81/140 (57%), Gaps = 7/140 (5%)
Query: 7 EQDIDEFRECFFLFARNGTIKTLD--ELSVIMRSLGMSPTIAELKKYLAE---KG-GKLS 60
E+ E RE F LF +GT T+D EL V MR+LG P E+KK ++E +G GK++
Sbjct: 2 EEQKQEIREAFDLFDADGT-GTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMN 60
Query: 61 FPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQI 120
F DFL VM +D +E++ AFK D ++G + K LK V GE L+ +E+ ++
Sbjct: 61 FGDFLTVMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEM 120
Query: 121 FREANVTMNSKVRYEDFVKI 140
EA+ + +V ++F++I
Sbjct: 121 IDEADRDGDGEVSEQEFLRI 140
>pdb|2LHH|A Chain A, Solution Structure Of Ca2+-Bound Ycam
Length = 128
Score = 80.5 bits (197), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 72/123 (58%), Gaps = 7/123 (5%)
Query: 2 AHHFREQDIDEFRECFFLFAR--NGTIKTLDELSVIMRSLGMSPTIAELKKYLAE----K 55
+ + E+ I EF+E F LF + NG+I + EL+ +MRSLG+SP+ AE+ + E
Sbjct: 1 SSNLTEEQIAEFKEAFALFDKDNNGSISS-SELATVMRSLGLSPSEAEVNDLMNEIDVDG 59
Query: 56 GGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSK 115
++ F +FL +M K+ D +E+++AFK D G + A LKHVL + GE L+
Sbjct: 60 NHQIEFSEFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDA 119
Query: 116 EVD 118
E++
Sbjct: 120 ELE 122
>pdb|2BL0|B Chain B, Physarum Polycephalum Myosin Ii Regulatory Domain
Length = 145
Score = 78.2 bits (191), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 81/143 (56%), Gaps = 11/143 (7%)
Query: 11 DEFRECFFLFARNGTIK-TLDELSVIMRSLGMSPTIAELKKYLAEKGGKLSFPDF-LKVM 68
D+ +ECF +F ++ K +++EL +RSLG +PT AEL G+L+ +F L
Sbjct: 5 DQIQECFQIFDKDNDGKVSIEELGSALRSLGKNPTNAELNTI----KGQLNAKEFDLATF 60
Query: 69 HT-HSKAEDIP----KEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFRE 123
T + K P KE++DAF+A D +GT+ L+ +L+N G+ L+S EV+++ +E
Sbjct: 61 KTVYRKPIKTPTEQSKEMLDAFRALDKEGNGTIQEAELRQLLLNLGDALTSSEVEELMKE 120
Query: 124 ANVTMNSKVRYEDFVKIACAPVP 146
+V+ + + YE FV + P
Sbjct: 121 VSVSGDGAINYESFVDMLVTGYP 143
>pdb|3QRX|A Chain A, Chlamydomonas Reinhardtii Centrin Bound To Melittin
Length = 169
Score = 75.5 bits (184), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 77/140 (55%), Gaps = 7/140 (5%)
Query: 7 EQDIDEFRECFFLFARNGTIKTLD--ELSVIMRSLGMSPTIAELKKYLAE----KGGKLS 60
E+ E RE F LF +G+ T+D EL V MR+LG P E+KK ++E G +
Sbjct: 24 EEQKQEIREAFDLFDTDGS-GTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTID 82
Query: 61 FPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQI 120
F +FL +M D +E++ AF+ D SGT+ K L+ V GE L+ +E+ ++
Sbjct: 83 FEEFLTMMTAKMGERDSREEILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEM 142
Query: 121 FREANVTMNSKVRYEDFVKI 140
EA+ ++++ ++F++I
Sbjct: 143 IAEADRNDDNEIDEDEFIRI 162
Score = 32.3 bits (72), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 37/71 (52%)
Query: 75 EDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRY 134
E+ +E+ +AF DT SGT+ AK LK + G +E+ ++ E + + + +
Sbjct: 24 EEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTIDF 83
Query: 135 EDFVKIACAPV 145
E+F+ + A +
Sbjct: 84 EEFLTMMTAKM 94
>pdb|3KF9|A Chain A, Crystal Structure Of The SdcenSKMLCK COMPLEX
pdb|3KF9|C Chain C, Crystal Structure Of The SdcenSKMLCK COMPLEX
Length = 149
Score = 73.6 bits (179), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 74/135 (54%), Gaps = 7/135 (5%)
Query: 12 EFRECFFLFARNGTIKTLD--ELSVIMRSLGMSPTIAELKKYLAE----KGGKLSFPDFL 65
E RE F LF +G+ T+D EL V MR+LG P E+KK +A+ G + F +FL
Sbjct: 9 EIREAFDLFDTDGS-GTIDAKELKVAMRALGFEPKKEEIKKMIADIDKDGSGTIDFEEFL 67
Query: 66 KVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREAN 125
++M D +E++ AF+ D ++G + K LK V GE ++ +E+ ++ EA+
Sbjct: 68 QMMTAKMGERDSREEIMKAFRLFDDDETGKISFKNLKRVAKELGENMTDEELQEMIDEAD 127
Query: 126 VTMNSKVRYEDFVKI 140
+ +V E+F +I
Sbjct: 128 RDGDGEVNEEEFFRI 142
Score = 32.7 bits (73), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 38/71 (53%)
Query: 75 EDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRY 134
E+ +E+ +AF DT SGT+ AK LK + G +E+ ++ + + + + +
Sbjct: 4 EEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMIADIDKDGSGTIDF 63
Query: 135 EDFVKIACAPV 145
E+F+++ A +
Sbjct: 64 EEFLQMMTAKM 74
>pdb|1BR1|B Chain B, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|D Chain D, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|F Chain F, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|H Chain H, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR4|B Chain B, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|D Chain D, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|F Chain F, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|H Chain H, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1I84|T Chain T, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment.
pdb|1I84|W Chain W, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment.
pdb|3DTP|C Chain C, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
pdb|3DTP|D Chain D, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
Length = 150
Score = 72.4 bits (176), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 75/145 (51%), Gaps = 10/145 (6%)
Query: 5 FREQDIDEFRECFFLFARNGTIKTL-DELSVIMRSLGMSPTIAELKKYLAEKGG------ 57
F E+ EF+E F LF R G K L + +MR+LG +PT AE+ K L
Sbjct: 3 FSEEQTAEFKEAFQLFDRTGDGKILYSQCGDVMRALGQNPTNAEVMKVLGNPKSDEMNLK 62
Query: 58 KLSFPDFLKVMHTHSKAEDIP--KEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSK 115
L F FL +M T +K +D ++ V+ + D +GTV ++HVLV GE ++ +
Sbjct: 63 TLKFEQFLPMMQTIAKNKDQGCFEDYVEGLRVFDKEGNGTVMGAEIRHVLVTLGEKMTEE 122
Query: 116 EVDQIFREANVTMNSKVRYEDFVKI 140
EV+Q+ + N + YE+ V++
Sbjct: 123 EVEQLVA-GHEDSNGCINYEELVRM 146
>pdb|3J04|C Chain C, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
pdb|3J04|F Chain F, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
Length = 148
Score = 72.4 bits (176), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 75/145 (51%), Gaps = 10/145 (6%)
Query: 5 FREQDIDEFRECFFLFARNGTIKTL-DELSVIMRSLGMSPTIAELKKYLAEKGG------ 57
F E+ EF+E F LF R G K L + +MR+LG +PT AE+ K L
Sbjct: 1 FSEEQTAEFKEAFQLFDRTGDGKILYSQCGDVMRALGQNPTNAEVMKVLGNPKSDEMNLK 60
Query: 58 KLSFPDFLKVMHTHSKAEDIP--KEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSK 115
L F FL +M T +K +D ++ V+ + D +GTV ++HVLV GE ++ +
Sbjct: 61 TLKFEQFLPMMQTIAKNKDQGCFEDYVEGLRVFDKEGNGTVMGAEIRHVLVTLGEKMTEE 120
Query: 116 EVDQIFREANVTMNSKVRYEDFVKI 140
EV+Q+ + N + YE+ V++
Sbjct: 121 EVEQLVA-GHEDSNGCINYEELVRM 144
>pdb|2W4A|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4G|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
pdb|2W4H|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
Length = 145
Score = 67.8 bits (164), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 77/140 (55%), Gaps = 10/140 (7%)
Query: 9 DIDEFRECFFLFARNGTIK-TLDELSVIMRSLGMSPTIAELKKYLAE------KGGKLSF 61
+I++F+E F LF R G K TL ++ I+R+LG +PT AE+ K L K++F
Sbjct: 2 EINDFKEAFLLFDRTGDAKITLSQVGDIVRALGQNPTNAEINKILGNPSKEEMNAKKITF 61
Query: 62 PDFLKVMHT--HSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQ 119
+FL ++ ++K + ++ V+ + D +GTV L+HVL GE ++ +EV++
Sbjct: 62 EEFLPMLQAAANNKDQGTFEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMTEEEVEE 121
Query: 120 IFREANVTMNSKVRYEDFVK 139
+ + N + YE FVK
Sbjct: 122 LMK-GQEDSNGCINYEAFVK 140
>pdb|2MYS|C Chain C, Myosin Subfragment-1, Alpha Carbon Coordinates Only For
The Two Light Chains
Length = 149
Score = 63.9 bits (154), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 74/145 (51%), Gaps = 10/145 (6%)
Query: 4 HFREQDIDEFRECFFLFARNGTIK-TLDELSVIMRSLGMSPTIAELKKYLAE------KG 56
F + D+F+E F LF R G K T ++ I R+LG +PT AE+ K L
Sbjct: 1 EFSKAAADDFKEAFLLFDRTGDAKITASQVGDIARALGQNPTNAEINKILGNPSKEEMNA 60
Query: 57 GKLSFPDFLKVMHT--HSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSS 114
++F +FL ++ ++K + ++ V+ + D +GTV L+HVL GE ++
Sbjct: 61 AAITFEEFLPMLQAAANNKDQGTFEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMTE 120
Query: 115 KEVDQIFREANVTMNSKVRYEDFVK 139
+EV+++ + N + YE FVK
Sbjct: 121 EEVEELMK-GQEDSNGCINYEAFVK 144
>pdb|1OE9|B Chain B, Crystal Structure Of Myosin V Motor With Essential Light
Chain - Nucleotide-Free
pdb|1W7I|B Chain B, Crystal Structure Of Myosin V Motor Without Nucleotide
Soaked In 10 Mm Mgadp
pdb|1W7J|B Chain B, Crystal Structure Of Myosin V Motor With Essential Light
Chain + Adp-Befx - Near Rigor
Length = 151
Score = 63.5 bits (153), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 73/144 (50%), Gaps = 10/144 (6%)
Query: 5 FREQDIDEFRECFFLFARNGTIKTL-DELSVIMRSLGMSPTIAELKKYLAE------KGG 57
F + ++EF+E F LF R G K L + +MR+LG +PT AE+ K L K
Sbjct: 4 FNKDQLEEFKEAFELFDRVGDGKILYSQCGDVMRALGQNPTNAEVLKVLGNPKSDELKSR 63
Query: 58 KLSFPDFLKVMHT--HSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSK 115
++ F FL ++ ++ + ++ ++ F+ D +G V L+HVL GE ++ +
Sbjct: 64 RVDFETFLPMLQAVAKNRGQGTYEDYLEGFRVFDKEGNGKVMGAELRHVLTTLGEKMTEE 123
Query: 116 EVDQIFREANVTMNSKVRYEDFVK 139
EV+ + + N + YE F+K
Sbjct: 124 EVETVLA-GHEDSNGCINYEAFLK 146
>pdb|1M8Q|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|U Chain U, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
Length = 147
Score = 63.5 bits (153), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 72/138 (52%), Gaps = 10/138 (7%)
Query: 11 DEFRECFFLFARNGTIK-TLDELSVIMRSLGMSPTIAELKKYLAE------KGGKLSFPD 63
D+F+E F LF R G K T ++ I R+LG +PT AE+ K L ++F +
Sbjct: 6 DDFKEAFLLFDRTGDAKITASQVGDIARALGQNPTNAEINKILGNPSKEEMNAAAITFEE 65
Query: 64 FLKVMHT--HSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIF 121
FL ++ ++K + ++ V+ + D +GTV L+HVL GE ++ +EV+++
Sbjct: 66 FLPMLQAAANNKDQGTFEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMTEEEVEELM 125
Query: 122 REANVTMNSKVRYEDFVK 139
+ N + YE FVK
Sbjct: 126 K-GQEDSNGCINYEAFVK 142
>pdb|3IFK|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
pdb|3IFK|B Chain B, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
Length = 90
Score = 62.8 bits (151), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 53/91 (58%), Gaps = 7/91 (7%)
Query: 2 AHHFREQDIDEFRECFFLFARNG--TIKTLDELSVIMRSLGMSPTIAELKKYL----AEK 55
A E+ I EF+E F LF ++G TI T EL +MRSLG +PT AEL+ + A+
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITT-KELGTVMRSLGQNPTEAELQDMINEVDADG 59
Query: 56 GGKLSFPDFLKVMHTHSKAEDIPKEVVDAFK 86
G + FP+FL +M K D +E+ +AF+
Sbjct: 60 NGTIDFPEFLTMMARKMKDTDSEEEIREAFR 90
Score = 28.9 bits (63), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 17/78 (21%), Positives = 35/78 (44%), Gaps = 4/78 (5%)
Query: 74 AEDIPKEVVDAFKAA----DTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMN 129
A+ + +E + FK A D GT+ K L V+ + G+ + E+ + E + N
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 130 SKVRYEDFVKIACAPVPD 147
+ + +F+ + + D
Sbjct: 61 GTIDFPEFLTMMARKMKD 78
>pdb|3J04|B Chain B, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
pdb|3J04|E Chain E, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
Length = 143
Score = 62.8 bits (151), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 72/139 (51%), Gaps = 5/139 (3%)
Query: 5 FREQDIDEFRECFFLF--ARNGTIKTLDELSVIMRSLGMSPTIAELKKYLAEKGGKLSFP 62
F + I EF+E F + R+G I D L ++ S+G +PT L+ ++E G ++F
Sbjct: 1 FDQSQIQEFKEAFNMIDQNRDGFIDKED-LHDMLASMGKNPTDEYLEGMMSEAPGPINFT 59
Query: 63 DFLKVMHTHSKAEDIPKEVV-DAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIF 121
FL + D P++V+ +AF D SG + +L+ +L G+ + +EVD+++
Sbjct: 60 MFLTMFGEKLNGTD-PEDVIRNAFACFDEEASGFIHEDHLRELLTTMGDRFTDEEVDEMY 118
Query: 122 REANVTMNSKVRYEDFVKI 140
REA + Y +F +I
Sbjct: 119 REAPIDKKGNFNYVEFTRI 137
>pdb|2KXW|A Chain A, Structure Of The C-Domain Fragment Of Apo Calmodulin Bound
To The Iq Motif Of Nav1.2
Length = 73
Score = 62.4 bits (150), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 46/72 (63%)
Query: 73 KAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKV 132
K +D +E+++AFK D +G + A L+HV+ N GE L+ EVD++ REA++ + +
Sbjct: 2 KEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHI 61
Query: 133 RYEDFVKIACAP 144
YE+FV++ +
Sbjct: 62 NYEEFVRMMVSK 73
>pdb|2RRT|A Chain A, Solution Structure Of Magnesium-Bound Form Of Calmodulin
C-Domain E104dE140D MUTANT
Length = 72
Score = 62.0 bits (149), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 45/68 (66%)
Query: 76 DIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYE 135
D +E+ +AF+ D +G + A L+HV+ N GE L+ +EVD++ REA++ + +V YE
Sbjct: 4 DSEEEIREAFRVFDKDGNGYISAADLRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 63
Query: 136 DFVKIACA 143
DFV++ A
Sbjct: 64 DFVQMMTA 71
>pdb|2RO9|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 C-Terminal Domain
Length = 69
Score = 62.0 bits (149), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 46/69 (66%)
Query: 76 DIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYE 135
D +E+ +AF+ D ++G + A L+HV+ N GE L+ +EVD++ REA+V + ++ YE
Sbjct: 1 DSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYE 60
Query: 136 DFVKIACAP 144
+FVK+ A
Sbjct: 61 EFVKVMMAK 69
>pdb|2KZ2|A Chain A, Calmodulin, C-Terminal Domain, F92e Mutant
Length = 94
Score = 62.0 bits (149), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 46/72 (63%)
Query: 73 KAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKV 132
K D +E+ +AF+ D +G + A L+HV+ N GE L+ +EVD++ REA++ + +V
Sbjct: 23 KDTDSEEEIREAFRVEDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQV 82
Query: 133 RYEDFVKIACAP 144
YE+FV++ A
Sbjct: 83 NYEEFVQMMTAK 94
>pdb|2GGM|A Chain A, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
pdb|2GGM|B Chain B, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
Length = 172
Score = 62.0 bits (149), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 75/140 (53%), Gaps = 7/140 (5%)
Query: 7 EQDIDEFRECFFLFARNGTIKTLD--ELSVIMRSLGMSPTIAELKKYLA----EKGGKLS 60
E+ E RE F LF +GT T+D EL V R+LG P E+KK ++ E GK +
Sbjct: 27 EEQKQEIREAFDLFDADGT-GTIDVKELKVAXRALGFEPKKEEIKKXISEIDKEGTGKXN 85
Query: 61 FPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQI 120
F DFL V +D +E++ AFK D ++G + K LK V GE L+ +E+ +
Sbjct: 86 FGDFLTVXTQKXSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEX 145
Query: 121 FREANVTMNSKVRYEDFVKI 140
EA+ + +V ++F++I
Sbjct: 146 IDEADRDGDGEVSEQEFLRI 165
>pdb|3OX5|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 62.0 bits (149), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 76/151 (50%), Gaps = 12/151 (7%)
Query: 1 MAHHFREQDIDEFRECFFLFARN--GTIKTLDELSVIMRSLGMSPTIAEL----KKYLAE 54
M R ++I+E RE F F ++ G I D L MR++G PT EL ++
Sbjct: 1 MDRSLRPEEIEELREAFREFDKDKDGYINCRD-LGNCMRTMGYMPTEMELIELSQQINMN 59
Query: 55 KGGKLSFPDFLKVMHTHSKAEDIP----KEVVDAFKAADTTKSGTVPAKYLKHVLVN-WG 109
GG + F DF+++M AE KE+ DAF+ DT G + L+ + G
Sbjct: 60 LGGHVDFDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRKLLG 119
Query: 110 EGLSSKEVDQIFREANVTMNSKVRYEDFVKI 140
+ +++++I R+ ++ + +V +E+FV++
Sbjct: 120 HQVGHRDIEEIIRDVDLNGDGRVDFEEFVRM 150
>pdb|1GGW|A Chain A, Cdc4p From Schizosaccharomyces Pombe
Length = 140
Score = 62.0 bits (149), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 75/138 (54%), Gaps = 4/138 (2%)
Query: 9 DIDEFRECFFLFARNGTIKTL-DELSVIMRSLGMSPTIAELKKYLAEKGGKLSFPDFLKV 67
D +++ F LF R+GT + + ++R+ G +PT+AE+ + + ++ FL+V
Sbjct: 3 DDSPYKQAFSLFDRHGTGRIPKTSIGDLLRACGQNPTLAEITEIESTLPAEVDMEQFLQV 62
Query: 68 MHTHSKAE--DIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREAN 125
++ + + P+E V F+ D +G + L++VL + GE LS++E+D++ +
Sbjct: 63 LNRPNGFDMPGDPEEFVKGFQVFDKDATGMIGVGELRYVLTSLGEKLSNEEMDELLKGVP 122
Query: 126 VTMNSKVRYEDFVKIACA 143
V + V Y DFV++ A
Sbjct: 123 VK-DGMVNYHDFVQMILA 139
>pdb|3OX6|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 76/151 (50%), Gaps = 12/151 (7%)
Query: 1 MAHHFREQDIDEFRECFFLFARN--GTIKTLDELSVIMRSLGMSPTIAEL----KKYLAE 54
M R ++I+E RE F F ++ G I D L MR++G PT EL ++
Sbjct: 1 MDRSLRPEEIEELREAFREFDKDKDGYINCRD-LGNCMRTMGYMPTEMELIELSQQINMN 59
Query: 55 KGGKLSFPDFLKVMHTHSKAEDIP----KEVVDAFKAADTTKSGTVPAKYLKHVL-VNWG 109
GG + F DF+++M AE KE+ DAF+ DT G + L+ + G
Sbjct: 60 LGGHVDFDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRALLG 119
Query: 110 EGLSSKEVDQIFREANVTMNSKVRYEDFVKI 140
+ +++++I R+ ++ + +V +E+FV++
Sbjct: 120 HQVGHRDIEEIIRDVDLNGDGRVDFEEFVRM 150
>pdb|1CMF|A Chain A, Nmr Solution Structure Of Apo Calmodulin Carboxy-Terminal
Domain
pdb|1CMG|A Chain A, Nmr Solution Structure Of Calcium-Loaded Calmodulin
Carboxy- Terminal Domain
Length = 73
Score = 60.8 bits (146), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 46/72 (63%)
Query: 73 KAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKV 132
K D +E+ +AF+ D +G + A L+HV+ N GE L+ +EVD++ REA++ + +V
Sbjct: 2 KDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQV 61
Query: 133 RYEDFVKIACAP 144
YE+FV++ A
Sbjct: 62 NYEEFVQMMTAK 73
>pdb|2LAN|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 N-Domain With Rdc
pdb|2LAP|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain With Rdc
Length = 167
Score = 60.8 bits (146), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 75/147 (51%), Gaps = 12/147 (8%)
Query: 5 FREQDIDEFRECFFLFARN--GTIKTLDELSVIMRSLGMSPTIAEL----KKYLAEKGGK 58
R ++I+E RE F F ++ G I D L MR++G PT EL ++ GG
Sbjct: 19 LRPEEIEELREAFREFDKDKDGYINCRD-LGNCMRTMGYMPTEMELIELSQQINMNLGGH 77
Query: 59 LSFPDFLKVMHTHSKAEDIP----KEVVDAFKAADTTKSGTVPAKYLKHVLVN-WGEGLS 113
+ F DF+++M AE KE+ DAF+ DT G + L+ + G +
Sbjct: 78 VDFDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRKLLGHQVG 137
Query: 114 SKEVDQIFREANVTMNSKVRYEDFVKI 140
+++++I R+ ++ + +V +E+FV++
Sbjct: 138 HRDIEEIIRDVDLNGDGRVDFEEFVRM 164
>pdb|1YRU|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella
Pertussis In Presence Of C-Terminal Calmodulin And 1mm
Calcium Chloride
pdb|1YRT|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella
Pertussis In Presence Of C-Terminal Calmodulin
Length = 74
Score = 60.5 bits (145), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 46/72 (63%)
Query: 73 KAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKV 132
K D +E+ +AF+ D +G + A L+HV+ N GE L+ +EVD++ REA++ + +V
Sbjct: 3 KDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQV 62
Query: 133 RYEDFVKIACAP 144
YE+FV++ A
Sbjct: 63 NYEEFVQMMTAK 74
>pdb|2ROB|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 C-Terminal Domain
Length = 70
Score = 60.5 bits (145), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 46/65 (70%)
Query: 76 DIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYE 135
D +E+ +AFK D ++G + A L+HV++N GE L+ +EV+Q+ +EA++ + +V YE
Sbjct: 1 DAEEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYE 60
Query: 136 DFVKI 140
+FVK+
Sbjct: 61 EFVKM 65
>pdb|1ZOT|B Chain B, Crystal Structure Analysis Of The CyaaC-Cam With Pmeapp
Length = 69
Score = 60.5 bits (145), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 45/68 (66%)
Query: 76 DIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYE 135
D +E+ +AF+ D +G + A L+HV+ N GE L+ +EVD++ REA++ + +V YE
Sbjct: 2 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 61
Query: 136 DFVKIACA 143
+FV++ A
Sbjct: 62 EFVQMMTA 69
>pdb|1FW4|A Chain A, Crystal Structure Of E. Coli Fragment Tr2c From Calmodulin
To 1.7 A Resolution
pdb|2LQP|A Chain A, Nmr Solution Structure Of The Ca2+-Calmodulin C-Terminal
Domain In A Complex With A Peptide (Nscate) From The
L-Type Voltage-Gated Calcium Channel Alpha1c Subunit
Length = 71
Score = 60.5 bits (145), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 45/68 (66%)
Query: 76 DIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYE 135
D +E+ +AF+ D +G + A L+HV+ N GE L+ +EVD++ REA++ + +V YE
Sbjct: 3 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 62
Query: 136 DFVKIACA 143
+FV++ A
Sbjct: 63 EFVQMMTA 70
>pdb|2KN2|A Chain A, Solution Structure Of The C-Terminal Domain Of Soybean
Calmodulin Isoform 4 Fused With The Calmodulin-Binding
Domain Of Ntmkp1
Length = 92
Score = 60.1 bits (144), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 46/65 (70%)
Query: 76 DIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYE 135
D +E+ +AFK D ++G + A L+HV++N GE L+ +EV+Q+ +EA++ + +V YE
Sbjct: 6 DAEEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYE 65
Query: 136 DFVKI 140
+FVK+
Sbjct: 66 EFVKM 70
>pdb|1AJ4|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 1
Structure
Length = 161
Score = 60.1 bits (144), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 77/148 (52%), Gaps = 13/148 (8%)
Query: 3 HHFREQDIDEFRECFFLF---ARNGTIKTLDELSVIMRSLGMSPTIAELKKYLAE----K 55
E+ +EF+ F +F A +G+I T EL +MR LG +PT EL++ + E
Sbjct: 10 EQLTEEQKNEFKAAFDIFVLGAEDGSISTK-ELGKVMRMLGQNPTPEELQEMIDEVDEDG 68
Query: 56 GGKLSFPDFLKVMHTHSKAED----IPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEG 111
G + F +FL VM S +D +E+ D F+ D G + + LK +L GE
Sbjct: 69 SGTVDFDEFL-VMMVRSMKDDSKGKTEEELSDLFRMFDKNADGYIDLEELKIMLQATGET 127
Query: 112 LSSKEVDQIFREANVTMNSKVRYEDFVK 139
++ +++++ ++ + + ++ Y++F++
Sbjct: 128 ITEDDIEELMKDGDKNNDGRIDYDEFLE 155
>pdb|2JTZ|A Chain A, Solution Structure And Chemical Shift Assignments Of The
F104-To-5-Flurotryptophan Mutant Of Cardiac Troponin C
Length = 161
Score = 59.7 bits (143), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 76/148 (51%), Gaps = 13/148 (8%)
Query: 3 HHFREQDIDEFRECFFLF---ARNGTIKTLDELSVIMRSLGMSPTIAELKKYLAE----K 55
E+ +EF+ F +F A +G+I T EL +MR LG +PT EL++ + E
Sbjct: 10 EQLTEEQKNEFKAAFDIFVLGAEDGSISTK-ELGKVMRMLGQNPTPEELQEMIDEVDEDG 68
Query: 56 GGKLSFPDFLKVMHTHSKAED----IPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEG 111
G + F +FL VM S +D +E+ D F+ D G + LK +L GE
Sbjct: 69 SGTVDFDEFL-VMMVRSMKDDSKGKSEEELSDLFRMXDKNADGYIDLDELKIMLQATGET 127
Query: 112 LSSKEVDQIFREANVTMNSKVRYEDFVK 139
++ +++++ ++ + + ++ Y++F++
Sbjct: 128 ITEDDIEELMKDGDKNNDGRIDYDEFLE 155
>pdb|3JTD|C Chain C, Calcium-Free Scallop Myosin Regulatory Domain With
Elc-D19a Point Mutation
Length = 156
Score = 59.7 bits (143), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 75/154 (48%), Gaps = 16/154 (10%)
Query: 7 EQDIDEFRECFFLFA----RNGTIKTLDELSVIMRSLGMSPTIAEL-----KKYLAEKGG 57
+ +ID+ ++ F LFA R+G + +L + R LG++P ++ + EK
Sbjct: 5 QDEIDDLKDVFELFAFWDGRDGAVDAF-KLGDVCRCLGINPRNEDVFAVGGTHKMGEK-- 61
Query: 58 KLSFPDFLKVMHTHSKAEDIP-KEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKE 116
L F +FL E + ++AFK D G + L+HVL GE LS ++
Sbjct: 62 SLPFEEFLPAYEGLMDCEQGTFADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDED 121
Query: 117 VDQIFREANVT--MNSKVRYEDFV-KIACAPVPD 147
VD+I + ++ + V+YEDFV K+ P PD
Sbjct: 122 VDEIIKLTDLQEDLEGNVKYEDFVKKVMAGPYPD 155
>pdb|1F71|A Chain A, Refined Solution Structure Of Calmodulin C-Terminal Domain
pdb|1J7P|A Chain A, Solution Structure Of Calcium Calmodulin C-Terminal Domain
pdb|2K3S|B Chain B, Haddock-Derived Structure Of The Ch-Domain Of The
Smoothelin-Like 1 Complexed With The C-Domain Of
Apocalmodulin
pdb|2KUH|A Chain A, Halothane Binds To Druggable Sites In Calcium-Calmodulin:
Solution Structure Of Halothane-Cam C-Terminal Domain
pdb|2LLQ|A Chain A, Solution Nmr-Derived Structure Of Calmodulin C-Lobe Bound
With Er Alpha Peptide
Length = 67
Score = 59.3 bits (142), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 44/66 (66%)
Query: 78 PKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDF 137
+E+ +AF+ D +G + A L+HV+ N GE L+ +EVD++ REA++ + +V YE+F
Sbjct: 1 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 60
Query: 138 VKIACA 143
V++ A
Sbjct: 61 VQMMTA 66
>pdb|1DTL|A Chain A, Crystal Structure Of Calcium-Saturated (3ca2+) Cardiac
Troponin C Complexed With The Calcium Sensitizer
Bepridil At 2.15 A Resolution
pdb|1J1D|A Chain A, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1D|D Chain D, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|A Chain A, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|D Chain D, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
Length = 161
Score = 59.3 bits (142), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 77/148 (52%), Gaps = 13/148 (8%)
Query: 3 HHFREQDIDEFRECFFLF---ARNGTIKTLDELSVIMRSLGMSPTIAELKKYLAE----K 55
E+ +EF+ F +F A +G+I T EL +MR LG +PT EL++ + E
Sbjct: 10 EQLTEEQKNEFKAAFDIFVLGAEDGSISTK-ELGKVMRMLGQNPTPEELQEMIDEVDEDG 68
Query: 56 GGKLSFPDFLKVMHTHSKAED----IPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEG 111
G + F +FL VM S +D +E+ D F+ D G + + LK +L GE
Sbjct: 69 SGTVDFDEFL-VMMVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLEELKIMLQATGET 127
Query: 112 LSSKEVDQIFREANVTMNSKVRYEDFVK 139
++ +++++ ++ + + ++ Y++F++
Sbjct: 128 ITEDDIEELMKDGDKNNDGRIDYDEFLE 155
>pdb|2COL|B Chain B, Crystal Structure Analysis Of CyaaC-Cam With Pyrophosphate
Length = 67
Score = 58.9 bits (141), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 44/65 (67%)
Query: 76 DIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYE 135
D +E+ +AF+ D +G + A L+HV+ N GE L+ +EVD++ REA++ + +V YE
Sbjct: 2 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 61
Query: 136 DFVKI 140
+FV++
Sbjct: 62 EFVQM 66
>pdb|2JT0|A Chain A, Solution Structure Of F104w Cardiac Troponin C
Length = 161
Score = 58.5 bits (140), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 76/148 (51%), Gaps = 13/148 (8%)
Query: 3 HHFREQDIDEFRECFFLF---ARNGTIKTLDELSVIMRSLGMSPTIAELKKYLAE----K 55
E+ +EF+ F +F A +G+I T EL +MR LG +PT EL++ + E
Sbjct: 10 EQLTEEQKNEFKAAFDIFVLGAEDGSISTK-ELGKVMRMLGQNPTPEELQEMIDEVDEDG 68
Query: 56 GGKLSFPDFLKVMHTHSKAED----IPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEG 111
G + F +FL VM S +D +E+ D F+ D G + LK +L GE
Sbjct: 69 SGTVDFDEFL-VMMVRSMKDDSKGKSEEELSDLFRMWDKNADGYIDLDELKIMLQATGET 127
Query: 112 LSSKEVDQIFREANVTMNSKVRYEDFVK 139
++ +++++ ++ + + ++ Y++F++
Sbjct: 128 ITEDDIEELMKDGDKNNDGRIDYDEFLE 155
>pdb|1WDC|C Chain C, Scallop Myosin Regulatory Domain
pdb|1B7T|Z Chain Z, Myosin Digested By Papain
pdb|1KK7|Z Chain Z, Scallop Myosin In The Near Rigor Conformation
pdb|1L2O|C Chain C, Scallop Myosin S1-Adp-P-Pdm In The Actin-Detached
Conformation
pdb|1KQM|C Chain C, Scallop Myosin S1-Amppnp In The Actin-Detached
Conformation
pdb|1KWO|C Chain C, Scallop Myosin S1-Atpgammas-P-Pdm In The Actin-Detached
Conformation
pdb|1QVI|Z Chain Z, Crystal Structure Of Scallop Myosin S1 In The Pre-Power
Stroke State To 2.6 Angstrom Resolution: Flexibility And
Function In The Head
pdb|1S5G|Z Chain Z, Structure Of Scallop Myosin S1 Reveals A Novel Nucleotide
Conformation
pdb|1SR6|C Chain C, Structure Of Nucleotide-free Scallop Myosin S1
pdb|3JVT|C Chain C, Calcium-Bound Scallop Myosin Regulatory Domain (Lever Arm)
With Reconstituted Complete Light Chains
Length = 156
Score = 58.5 bits (140), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 74/154 (48%), Gaps = 16/154 (10%)
Query: 7 EQDIDEFRECFFLF----ARNGTIKTLDELSVIMRSLGMSPTIAEL-----KKYLAEKGG 57
+ +ID+ ++ F LF R+G + +L + R LG++P ++ + EK
Sbjct: 5 QDEIDDLKDVFELFDFWDGRDGAVDAF-KLGDVCRCLGINPRNEDVFAVGGTHKMGEK-- 61
Query: 58 KLSFPDFLKVMHTHSKAEDIP-KEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKE 116
L F +FL E + ++AFK D G + L+HVL GE LS ++
Sbjct: 62 SLPFEEFLPAYEGLMDCEQGTFADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDED 121
Query: 117 VDQIFREANVT--MNSKVRYEDFV-KIACAPVPD 147
VD+I + ++ + V+YEDFV K+ P PD
Sbjct: 122 VDEIIKLTDLQEDLEGNVKYEDFVKKVMAGPYPD 155
>pdb|1LA0|A Chain A, Solution Structure Of Calcium Saturated Cardiac Troponin C
In The Troponin C-Troponin I Complex
Length = 161
Score = 58.5 bits (140), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 76/148 (51%), Gaps = 13/148 (8%)
Query: 3 HHFREQDIDEFRECFFLF---ARNGTIKTLDELSVIMRSLGMSPTIAELKKYLAE----K 55
E+ +EF+ F +F A +G I T EL +MR LG +PT EL++ + E
Sbjct: 10 EQLTEEQKNEFKAAFDIFVLGAEDGCISTK-ELGKVMRMLGQNPTPEELQEMIDEVDEDG 68
Query: 56 GGKLSFPDFL----KVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEG 111
G + F +FL + M SK + +E+ D F+ D G + + LK +L GE
Sbjct: 69 SGTVDFDEFLVMMVRCMKDDSKGK-TEEELSDLFRMFDKNADGYIDLEELKIMLQATGET 127
Query: 112 LSSKEVDQIFREANVTMNSKVRYEDFVK 139
++ +++++ ++ + + ++ Y++F++
Sbjct: 128 ITEDDIEELMKDGDKNNDGRIDYDEFLE 155
>pdb|1A2X|A Chain A, Complex Of Troponin C With A 47 Residue (1-47) Fragment Of
Troponin I
Length = 159
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 73/146 (50%), Gaps = 10/146 (6%)
Query: 4 HFREQDIDEFRECFFLF-ARNGTIKTLDELSVIMRSLGMSPTIAELKKYLAE----KGGK 58
+ E+ I EF+ F +F A G ++ EL +MR LG +PT EL + E G
Sbjct: 10 YLSEEMIAEFKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGT 69
Query: 59 LSFPDFLKVMHTHSKAEDI----PKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSS 114
+ F +FL VM ED +E+ + F+ D G + A+ L + GE ++
Sbjct: 70 IDFEEFL-VMMVRQMKEDAKGKSEEELAECFRIFDRNADGYIDAEELAEIFRASGEHVTD 128
Query: 115 KEVDQIFREANVTMNSKVRYEDFVKI 140
+E++ + ++ + + ++ +++F+K+
Sbjct: 129 EEIESLMKDGDKNNDGRIDFDEFLKM 154
>pdb|2OS8|C Chain C, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
pdb|2OTG|C Chain C, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
Length = 157
Score = 58.2 bits (139), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 73/154 (47%), Gaps = 16/154 (10%)
Query: 7 EQDIDEFRECFFLF----ARNGTIKTLDELSVIMRSLGMSPTIAEL-----KKYLAEKGG 57
+ +ID+ +E F LF R+G + ++ + R LG++P ++ + EK
Sbjct: 6 QDEIDDLKEVFELFDFWDGRDGAVDAF-KIGDVCRCLGINPRNEDVFAVGGTHKMGEK-- 62
Query: 58 KLSFPDFLKVMHTHSKAED-IPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKE 116
L F +FL E + ++AFK D G + L+HVL GE LS +E
Sbjct: 63 SLPFEEFLPAYEGLMDCEQGTYADYMEAFKTFDREGQGFISGAELRHVLSGLGERLSDEE 122
Query: 117 VDQIFREANVT--MNSKVRYEDFV-KIACAPVPD 147
VD+I ++ + V+YE+FV K+ P PD
Sbjct: 123 VDEIINLTDLQEDLEGNVKYEEFVKKVMTGPYPD 156
>pdb|3PN7|C Chain C, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3PN7|F Chain F, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3TS5|C Chain C, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
pdb|3TS5|F Chain F, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
pdb|3TUY|C Chain C, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
pdb|3TUY|F Chain F, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
Length = 156
Score = 57.8 bits (138), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 73/154 (47%), Gaps = 16/154 (10%)
Query: 7 EQDIDEFRECFFLF----ARNGTIKTLDELSVIMRSLGMSPTIAEL-----KKYLAEKGG 57
+ +ID+ +E F LF R+G + ++ + R LG++P ++ + EK
Sbjct: 5 QDEIDDLKEVFELFDFWDGRDGAVDAF-KIGDVCRCLGINPRNEDVFAVGGTHKMGEK-- 61
Query: 58 KLSFPDFLKVMHTHSKAED-IPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKE 116
L F +FL E + ++AFK D G + L+HVL GE LS +E
Sbjct: 62 SLPFEEFLPAYEGLMDCEQGTYADYMEAFKTFDREGQGFISGAELRHVLSGLGERLSDEE 121
Query: 117 VDQIFREANVT--MNSKVRYEDFV-KIACAPVPD 147
VD+I ++ + V+YE+FV K+ P PD
Sbjct: 122 VDEIINLTDLQEDLEGNVKYEEFVKKVMTGPYPD 155
>pdb|2EC6|C Chain C, Placopecten Striated Muscle Myosin Ii
Length = 156
Score = 57.8 bits (138), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 73/154 (47%), Gaps = 16/154 (10%)
Query: 7 EQDIDEFRECFFLF----ARNGTIKTLDELSVIMRSLGMSPTIAEL-----KKYLAEKGG 57
+ +ID+ ++ F LF R+G + +L + R LG++P ++ + EK
Sbjct: 5 QDEIDDLKDVFELFDFWDGRDGAVDAF-KLGDVCRCLGINPRNEDVFAVGGTHKMGEK-- 61
Query: 58 KLSFPDFLKVMHTHSKAEDIP-KEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKE 116
L F +FL E + ++AFK D G + L+HVL GE LS +E
Sbjct: 62 SLPFEEFLPAYEGLMDCEQGTFADYMEAFKTFDREGQGFISGAELRHVLSGLGERLSDEE 121
Query: 117 VDQIFREANVT--MNSKVRYEDFV-KIACAPVPD 147
VD+I ++ + V+YE+FV K+ P PD
Sbjct: 122 VDEIINLTDLQEDLEGNVKYEEFVKKVMAGPYPD 155
>pdb|1TCF|A Chain A, Crystal Structure Of Calcium-Saturated Rabbit Skeletal
Troponin C
pdb|1TN4|A Chain A, Four Calcium Tnc
pdb|2TN4|A Chain A, Four Calcium Tnc
Length = 159
Score = 57.4 bits (137), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 73/146 (50%), Gaps = 10/146 (6%)
Query: 4 HFREQDIDEFRECFFLF-ARNGTIKTLDELSVIMRSLGMSPTIAELKKYLAE----KGGK 58
+ E+ I EF+ F +F A G ++ EL +MR LG +PT EL + E G
Sbjct: 10 YLSEEMIAEFKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGT 69
Query: 59 LSFPDFLKVMHTHSKAEDI----PKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSS 114
+ F +FL VM ED +E+ + F+ D G + A+ L + GE ++
Sbjct: 70 IDFEEFL-VMMVRQMKEDAKGKSEEELAELFRIFDRNADGYIDAEELAEIFRASGEHVTD 128
Query: 115 KEVDQIFREANVTMNSKVRYEDFVKI 140
+E++ + ++ + + ++ +++F+K+
Sbjct: 129 EEIESLMKDGDKNNDGRIDFDEFLKM 154
>pdb|3I5G|B Chain B, Crystal Structure Of Rigor-Like Squid Myosin S1
pdb|3I5H|B Chain B, The Crystal Structure Of Rigor Like Squid Myosin S1 In The
Absence Of Nucleotide
pdb|3I5I|B Chain B, The Crystal Structure Of Squid Myosin S1 In The Presence
Of So4 2-
pdb|3I5F|B Chain B, Crystal Structure Of Squid Mg.Adp Myosin S1
Length = 153
Score = 57.4 bits (137), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 65/136 (47%), Gaps = 4/136 (2%)
Query: 7 EQDIDEFRECFFLFA--RNGTIKTLDELSVIMRSLGMSPTIAELKKYLAEKGGKLSFPDF 64
++ + E +E F + R+G I +++L + SLG P EL L E G+L+F F
Sbjct: 12 QRQMQELKEAFTMIDQDRDGFI-GMEDLKDMFSSLGRVPPDDELNAMLKECPGQLNFTAF 70
Query: 65 LKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREA 124
L + D + +AF D G +P YLK +L N G+ S +E+ ++++A
Sbjct: 71 LTLFGEKVSGTDPEDALRNAFSMFDEDGQGFIPEDYLKDLLENMGDNFSKEEIKNVWKDA 130
Query: 125 NVTMNSKVRYEDFVKI 140
+ N + Y V I
Sbjct: 131 PLK-NKQFNYNKMVDI 145
>pdb|2W4T|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4V|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
pdb|2W4W|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
Length = 151
Score = 57.0 bits (136), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 73/153 (47%), Gaps = 16/153 (10%)
Query: 7 EQDIDEFRECFFLF----ARNGTIKTLDELSVIMRSLGMSPTIAEL-----KKYLAEKGG 57
+ +ID+ ++ F LF R+G + +L + R LG++P ++ + EK
Sbjct: 2 QDEIDDLKDVFELFDFWDGRDGAVDAF-KLGDVCRCLGINPRNEDVFAVGGTHKMGEK-- 58
Query: 58 KLSFPDFLKVMHTHSKAEDIP-KEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKE 116
L F +FL E + ++AFK D G + L+HVL GE LS ++
Sbjct: 59 SLPFEEFLPAYEGLMDCEQGTFADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDED 118
Query: 117 VDQIFREANVT--MNSKVRYEDFV-KIACAPVP 146
VD+I + ++ + V+YEDFV K+ P P
Sbjct: 119 VDEIIKLTDLQEDLEGNVKYEDFVKKVMAGPYP 151
>pdb|1DFK|Z Chain Z, Nucleotide-Free Scallop Myosin S1-Near Rigor State
pdb|1DFL|Z Chain Z, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
pdb|1DFL|X Chain X, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
Length = 152
Score = 57.0 bits (136), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 73/153 (47%), Gaps = 16/153 (10%)
Query: 7 EQDIDEFRECFFLF----ARNGTIKTLDELSVIMRSLGMSPTIAEL-----KKYLAEKGG 57
+ +ID+ ++ F LF R+G + +L + R LG++P ++ + EK
Sbjct: 3 QDEIDDLKDVFELFDFWDGRDGAVDAF-KLGDVCRCLGINPRNEDVFAVGGTHKMGEK-- 59
Query: 58 KLSFPDFLKVMHTHSKAEDIP-KEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKE 116
L F +FL E + ++AFK D G + L+HVL GE LS ++
Sbjct: 60 SLPFEEFLPAYEGLMDCEQGTFADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDED 119
Query: 117 VDQIFREANVT--MNSKVRYEDFV-KIACAPVP 146
VD+I + ++ + V+YEDFV K+ P P
Sbjct: 120 VDEIIKLTDLQEDLEGNVKYEDFVKKVMAGPYP 152
>pdb|2LLO|A Chain A, Solution Nmr-Derived Structure Of Calmodulin N-Lobe
Bound With Er Alpha Peptide
Length = 80
Score = 56.6 bits (135), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 46/81 (56%), Gaps = 7/81 (8%)
Query: 2 AHHFREQDIDEFRECFFLFARNG--TIKTLDELSVIMRSLGMSPTIAELKKYL----AEK 55
A E+ I EF+E F LF ++G TI T EL +MRSLG +PT AEL+ + A+
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITT-KELGTVMRSLGQNPTEAELQDMINEVDADG 59
Query: 56 GGKLSFPDFLKVMHTHSKAED 76
G + FP+FL +M K D
Sbjct: 60 NGTIDFPEFLTMMARKMKDTD 80
Score = 28.9 bits (63), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 17/78 (21%), Positives = 35/78 (44%), Gaps = 4/78 (5%)
Query: 74 AEDIPKEVVDAFKAA----DTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMN 129
A+ + +E + FK A D GT+ K L V+ + G+ + E+ + E + N
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 130 SKVRYEDFVKIACAPVPD 147
+ + +F+ + + D
Sbjct: 61 GTIDFPEFLTMMARKMKD 78
>pdb|1KK8|C Chain C, Scallop Myosin (S1-Adp-Befx) In The Actin-Detached
Conformation
Length = 154
Score = 56.6 bits (135), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 73/153 (47%), Gaps = 16/153 (10%)
Query: 7 EQDIDEFRECFFLF----ARNGTIKTLDELSVIMRSLGMSPTIAEL-----KKYLAEKGG 57
+ +ID+ ++ F LF R+G + +L + R LG++P ++ + EK
Sbjct: 5 QDEIDDLKDVFELFDFWDGRDGAVDAF-KLGDVCRCLGINPRNEDVFAVGGTHKMGEK-- 61
Query: 58 KLSFPDFLKVMHTHSKAEDIP-KEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKE 116
L F +FL E + ++AFK D G + L+HVL GE LS ++
Sbjct: 62 SLPFEEFLPAYEGLMDCEQGTFADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDED 121
Query: 117 VDQIFREANVT--MNSKVRYEDFV-KIACAPVP 146
VD+I + ++ + V+YEDFV K+ P P
Sbjct: 122 VDEIIKLTDLQEDLEGNVKYEDFVKKVMAGPYP 154
>pdb|2JT3|A Chain A, Solution Structure Of F153w Cardiac Troponin C
Length = 161
Score = 56.6 bits (135), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 76/148 (51%), Gaps = 13/148 (8%)
Query: 3 HHFREQDIDEFRECFFLF---ARNGTIKTLDELSVIMRSLGMSPTIAELKKYLAE----K 55
E+ +EF+ F +F A +G+I T EL +MR LG +PT EL++ + E
Sbjct: 10 EQLTEEQKNEFKAAFDIFVLGAEDGSISTK-ELGKVMRMLGQNPTPEELQEMIDEVDEDG 68
Query: 56 GGKLSFPDFLKVMHTHSKAED----IPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEG 111
G + F +FL VM S +D +E+ D F+ D G + LK +L GE
Sbjct: 69 SGTVDFDEFL-VMMVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLDELKIMLQATGET 127
Query: 112 LSSKEVDQIFREANVTMNSKVRYEDFVK 139
++ +++++ ++ + + ++ Y+++++
Sbjct: 128 ITEDDIEELMKDGDKNNDGRIDYDEWLE 155
>pdb|3DTP|E Chain E, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
pdb|3DTP|F Chain F, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
Length = 196
Score = 56.6 bits (135), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 60/138 (43%), Gaps = 4/138 (2%)
Query: 5 FREQDIDEFRECFFLFA--RNGTIKTLDELSVIMRSLGMSPTIAELKKYLAEKGGKLSFP 62
F + + EF+E F L ++G I D + SLG T EL +AE G ++F
Sbjct: 51 FTQHQVQEFKEAFQLIDQDKDGFISKND-IRATFDSLGRLCTEQELDSMVAEAPGPINFT 109
Query: 63 DFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFR 122
FL + D +V+AF D G + LK L WGE S EVDQ
Sbjct: 110 MFLTIFGDRIAGTDEEDVIVNAFNLFDEG-DGKCKEETLKRSLTTWGEKFSQDEVDQALS 168
Query: 123 EANVTMNSKVRYEDFVKI 140
EA + N + + F +I
Sbjct: 169 EAPIDGNGLIDIKKFAQI 186
>pdb|4TNC|A Chain A, Refined Structure Of Chicken Skeletal Muscle Troponin C In
The Two-Calcium State At 2-Angstroms Resolution
Length = 162
Score = 56.2 bits (134), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 72/143 (50%), Gaps = 10/143 (6%)
Query: 7 EQDIDEFRECFFLF-ARNGTIKTLDELSVIMRSLGMSPTIAELKKYLAE----KGGKLSF 61
E+ I EF+ F +F A G + EL +MR LG +PT EL + E G + F
Sbjct: 16 EEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDF 75
Query: 62 PDFLKVMHTHSKAEDI----PKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEV 117
+FL VM ED +E+ D F+ D G + + L +L GE ++ +++
Sbjct: 76 EEFL-VMMVRQMKEDAKGKSEEELADCFRIFDKNADGFIDIEELGEILRATGEHVTEEDI 134
Query: 118 DQIFREANVTMNSKVRYEDFVKI 140
+ + ++++ + ++ +++F+K+
Sbjct: 135 EDLMKDSDKNNDGRIDFDEFLKM 157
Score = 30.4 bits (67), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 33/66 (50%), Gaps = 4/66 (6%)
Query: 77 IPKEVVDAFKAA----DTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKV 132
+ +E++ FKAA D G + K L V+ G+ + +E+D I E + + +
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTI 73
Query: 133 RYEDFV 138
+E+F+
Sbjct: 74 DFEEFL 79
>pdb|3UCT|A Chain A, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin
In The Presence Of Zn2+
pdb|3UCT|B Chain B, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin
In The Presence Of Zn2+
pdb|3UCW|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|B Chain B, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|C Chain C, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|D Chain D, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCY|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
In The Presence Of Zn2+
Length = 79
Score = 56.2 bits (134), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 44/73 (60%), Gaps = 7/73 (9%)
Query: 2 AHHFREQDIDEFRECFFLFARNG--TIKTLDELSVIMRSLGMSPTIAELKKYL----AEK 55
A E+ I EF+E F LF ++G TI T EL +MRSLG +PT AEL+ + A+
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITT-KELGTVMRSLGQNPTEAELQDMINEVDADG 59
Query: 56 GGKLSFPDFLKVM 68
G + FP+FL +M
Sbjct: 60 NGTIDFPEFLTMM 72
Score = 28.9 bits (63), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 17/78 (21%), Positives = 35/78 (44%), Gaps = 4/78 (5%)
Query: 74 AEDIPKEVVDAFKAA----DTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMN 129
A+ + +E + FK A D GT+ K L V+ + G+ + E+ + E + N
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 130 SKVRYEDFVKIACAPVPD 147
+ + +F+ + + D
Sbjct: 61 GTIDFPEFLTMMARKMKD 78
>pdb|1F70|A Chain A, Refined Solution Structure Of Calmodulin N-Terminal
Domain
pdb|2PQ3|A Chain A, N-Terminal Calmodulin Zn-Trapped Intermediate
pdb|2KUG|A Chain A, Halothane Binds To Druggable Sites In
Calcium-Calmodulin: Solution Structure Of Halothane-Cam
N-Terminal Domain
Length = 76
Score = 55.8 bits (133), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 44/73 (60%), Gaps = 7/73 (9%)
Query: 2 AHHFREQDIDEFRECFFLFARNG--TIKTLDELSVIMRSLGMSPTIAELKKYL----AEK 55
A E+ I EF+E F LF ++G TI T EL +MRSLG +PT AEL+ + A+
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITT-KELGTVMRSLGQNPTEAELQDMINEVDADG 59
Query: 56 GGKLSFPDFLKVM 68
G + FP+FL +M
Sbjct: 60 NGTIDFPEFLTMM 72
Score = 28.1 bits (61), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 16/71 (22%), Positives = 33/71 (46%), Gaps = 4/71 (5%)
Query: 74 AEDIPKEVVDAFKAA----DTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMN 129
A+ + +E + FK A D GT+ K L V+ + G+ + E+ + E + N
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 130 SKVRYEDFVKI 140
+ + +F+ +
Sbjct: 61 GTIDFPEFLTM 71
>pdb|3B32|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-75
Length = 75
Score = 55.8 bits (133), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 44/73 (60%), Gaps = 7/73 (9%)
Query: 2 AHHFREQDIDEFRECFFLFARNG--TIKTLDELSVIMRSLGMSPTIAELKKYL----AEK 55
A E+ I EF+E F LF ++G TI T EL +MRSLG +PT AEL+ + A+
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITT-KELGTVMRSLGQNPTEAELQDMINEVDADG 59
Query: 56 GGKLSFPDFLKVM 68
G + FP+FL +M
Sbjct: 60 NGTIDFPEFLTMM 72
Score = 28.1 bits (61), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/71 (22%), Positives = 33/71 (46%), Gaps = 4/71 (5%)
Query: 74 AEDIPKEVVDAFKAA----DTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMN 129
A+ + +E + FK A D GT+ K L V+ + G+ + E+ + E + N
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 130 SKVRYEDFVKI 140
+ + +F+ +
Sbjct: 61 GTIDFPEFLTM 71
>pdb|1AK8|A Chain A, Nmr Solution Structure Of Cerium-Loaded Calmodulin
Amino- Terminal Domain (Ce2-Tr1c), 23 Structures
Length = 76
Score = 55.8 bits (133), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 44/73 (60%), Gaps = 7/73 (9%)
Query: 2 AHHFREQDIDEFRECFFLFARNG--TIKTLDELSVIMRSLGMSPTIAELKKYL----AEK 55
A E+ I EF+E F LF ++G TI T EL +MRSLG +PT AEL+ + A+
Sbjct: 2 ADQLTEEQIAEFKEAFSLFDKDGDGTITT-KELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 56 GGKLSFPDFLKVM 68
G + FP+FL +M
Sbjct: 61 NGTIDFPEFLTMM 73
Score = 28.1 bits (61), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/71 (22%), Positives = 33/71 (46%), Gaps = 4/71 (5%)
Query: 74 AEDIPKEVVDAFKAA----DTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMN 129
A+ + +E + FK A D GT+ K L V+ + G+ + E+ + E + N
Sbjct: 2 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 61
Query: 130 SKVRYEDFVKI 140
+ + +F+ +
Sbjct: 62 GTIDFPEFLTM 72
>pdb|2LQC|A Chain A, Nmr Solution Structure Of A Ca2+-Calmodulin With A
Binding Motif (Nscate) Peptide From The N-Terminal
Cytoplasmic Domain Of The L-Type Voltage-Cated Calcium
Channel Alpha1c Subunit
Length = 77
Score = 55.8 bits (133), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 44/73 (60%), Gaps = 7/73 (9%)
Query: 2 AHHFREQDIDEFRECFFLFARNG--TIKTLDELSVIMRSLGMSPTIAELKKYL----AEK 55
A E+ I EF+E F LF ++G TI T EL +MRSLG +PT AEL+ + A+
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITT-KELGTVMRSLGQNPTEAELQDMINEVDADG 59
Query: 56 GGKLSFPDFLKVM 68
G + FP+FL +M
Sbjct: 60 NGTIDFPEFLTMM 72
Score = 28.1 bits (61), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 16/71 (22%), Positives = 33/71 (46%), Gaps = 4/71 (5%)
Query: 74 AEDIPKEVVDAFKAA----DTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMN 129
A+ + +E + FK A D GT+ K L V+ + G+ + E+ + E + N
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 130 SKVRYEDFVKI 140
+ + +F+ +
Sbjct: 61 GTIDFPEFLTM 71
>pdb|2JT8|A Chain A, Solution Structure Of The F153-To-5-Flurotryptophan Mutant
Of Human Cardiac Troponin C
Length = 161
Score = 55.8 bits (133), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 75/148 (50%), Gaps = 13/148 (8%)
Query: 3 HHFREQDIDEFRECFFLF---ARNGTIKTLDELSVIMRSLGMSPTIAELKKYLAE----K 55
E+ +EF+ F +F A +G+I T EL +MR LG +PT EL++ + E
Sbjct: 10 EQLTEEQKNEFKAAFDIFVLGAEDGSISTK-ELGKVMRMLGQNPTPEELQEMIDEVDEDG 68
Query: 56 GGKLSFPDFLKVMHTHSKAED----IPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEG 111
G + F +FL VM S +D +E+ D F+ D G + LK +L GE
Sbjct: 69 SGTVDFDEFL-VMMVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLDELKIMLQATGET 127
Query: 112 LSSKEVDQIFREANVTMNSKVRYEDFVK 139
++ +++++ ++ + + ++ Y++ ++
Sbjct: 128 ITEDDIEELMKDGDKNNDGRIDYDEXLE 155
>pdb|1SW8|A Chain A, Solution Structure Of The N-Terminal Domain Of Human
N60d Calmodulin Refined With Paramagnetism Based
Strategy
Length = 79
Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 44/73 (60%), Gaps = 7/73 (9%)
Query: 2 AHHFREQDIDEFRECFFLFARNG--TIKTLDELSVIMRSLGMSPTIAELKKYL----AEK 55
A E+ I EF+E F LF ++G TI T EL +MRSLG +PT AEL+ + A+
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITT-KELGTVMRSLGQNPTEAELQDMINEVDADG 59
Query: 56 GGKLSFPDFLKVM 68
G + FP+FL +M
Sbjct: 60 DGTIDFPEFLTMM 72
Score = 26.9 bits (58), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 16/78 (20%), Positives = 35/78 (44%), Gaps = 4/78 (5%)
Query: 74 AEDIPKEVVDAFKAA----DTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMN 129
A+ + +E + FK A D GT+ K L V+ + G+ + E+ + E + +
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGD 60
Query: 130 SKVRYEDFVKIACAPVPD 147
+ + +F+ + + D
Sbjct: 61 GTIDFPEFLTMMARKMKD 78
>pdb|5TNC|A Chain A, Refined Crystal Structure Of Troponin C From Turkey
Skeletal Muscle At 2.0 Angstroms Resolution
Length = 162
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 72/143 (50%), Gaps = 10/143 (6%)
Query: 7 EQDIDEFRECFFLF-ARNGTIKTLDELSVIMRSLGMSPTIAELKKYLAE----KGGKLSF 61
E+ I EF+ F +F A G + EL +MR LG +PT EL + E G + F
Sbjct: 16 EEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDF 75
Query: 62 PDFLKVMHTHSKAEDI----PKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEV 117
+FL VM ED +E+ D F+ D G + + L +L GE ++ +++
Sbjct: 76 EEFL-VMMVRQMKEDAKGKSEEELEDCFRIFDKNADGFIDIEELGEILRATGEHVTEEDI 134
Query: 118 DQIFREANVTMNSKVRYEDFVKI 140
+ + ++++ + ++ +++F+K+
Sbjct: 135 EDLMKDSDKNNDGRIDFDEFLKM 157
Score = 30.4 bits (67), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 33/66 (50%), Gaps = 4/66 (6%)
Query: 77 IPKEVVDAFKAA----DTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKV 132
+ +E++ FKAA D G + K L V+ G+ + +E+D I E + + +
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTI 73
Query: 133 RYEDFV 138
+E+F+
Sbjct: 74 DFEEFL 79
>pdb|2RO8|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 N-Terminal Domain
Length = 79
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 42/72 (58%), Gaps = 5/72 (6%)
Query: 2 AHHFREQDIDEFRECFFLFARNGT-IKTLDELSVIMRSLGMSPTIAELKKYL----AEKG 56
A ++ I EF+E F LF ++G T EL +MRSLG +PT AEL+ + A+
Sbjct: 1 ADQLTDEQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 57 GKLSFPDFLKVM 68
G + FP+FL +M
Sbjct: 61 GTIDFPEFLNLM 72
>pdb|1SCM|C Chain C, Structure Of The Regulatory Domain Of Scallop Myosin At
2.8 Angstroms Resolution
Length = 149
Score = 54.7 bits (130), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 70/145 (48%), Gaps = 15/145 (10%)
Query: 7 EQDIDEFRECFFLF----ARNGTIKTLDELSVIMRSLGMSPTIAEL-----KKYLAEKGG 57
+ +ID+ ++ F LF R+G + +L + R LG++P ++ + EK
Sbjct: 2 QDEIDDLKDVFELFDFWDGRDGAVDAF-KLGDVCRCLGINPRNEDVFAVGGTHKMGEK-- 58
Query: 58 KLSFPDFLKVMHTHSKAEDIP-KEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKE 116
L F +FL E + ++AFK D G + L+HVL GE LS ++
Sbjct: 59 SLPFEEFLPAYEGLMDCEQGTFADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDED 118
Query: 117 VDQIFREANVT--MNSKVRYEDFVK 139
VD+I + ++ + V+YEDFVK
Sbjct: 119 VDEIIKLTDLQEDLEGNVKYEDFVK 143
>pdb|1YTZ|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Activated State
pdb|1YV0|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Free State
pdb|1NCX|A Chain A, Troponin C
pdb|1NCY|A Chain A, Troponin-C, Complex With Manganese
pdb|1NCZ|A Chain A, Troponin C
pdb|1TOP|A Chain A, Structure Of Chicken Skeletal Muscle Troponin-C At 1.78
Angstroms Resolution
Length = 162
Score = 54.3 bits (129), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 72/143 (50%), Gaps = 10/143 (6%)
Query: 7 EQDIDEFRECFFLF-ARNGTIKTLDELSVIMRSLGMSPTIAELKKYLAE----KGGKLSF 61
E+ I EF+ F +F A G + EL +MR LG +PT EL + E G + F
Sbjct: 16 EEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDF 75
Query: 62 PDFLKVMHTHSKAEDI----PKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEV 117
+FL VM ED +E+ + F+ D G + + L +L GE ++ +++
Sbjct: 76 EEFL-VMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVTEEDI 134
Query: 118 DQIFREANVTMNSKVRYEDFVKI 140
+ + ++++ + ++ +++F+K+
Sbjct: 135 EDLMKDSDKNNDGRIDFDEFLKM 157
Score = 30.4 bits (67), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 33/66 (50%), Gaps = 4/66 (6%)
Query: 77 IPKEVVDAFKAA----DTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKV 132
+ +E++ FKAA D G + K L V+ G+ + +E+D I E + + +
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTI 73
Query: 133 RYEDFV 138
+E+F+
Sbjct: 74 DFEEFL 79
>pdb|2W49|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4U|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
Length = 159
Score = 54.3 bits (129), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 72/143 (50%), Gaps = 10/143 (6%)
Query: 7 EQDIDEFRECFFLF-ARNGTIKTLDELSVIMRSLGMSPTIAELKKYLAE----KGGKLSF 61
E+ I EF+ F +F A G + EL +MR LG +PT EL + E G + F
Sbjct: 13 EEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDF 72
Query: 62 PDFLKVMHTHSKAEDI----PKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEV 117
+FL VM ED +E+ + F+ D G + + L +L GE ++ +++
Sbjct: 73 EEFL-VMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVTEEDI 131
Query: 118 DQIFREANVTMNSKVRYEDFVKI 140
+ + ++++ + ++ +++F+K+
Sbjct: 132 EDLMKDSDKNNDGRIDFDEFLKM 154
Score = 30.4 bits (67), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 33/66 (50%), Gaps = 4/66 (6%)
Query: 77 IPKEVVDAFKAA----DTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKV 132
+ +E++ FKAA D G + K L V+ G+ + +E+D I E + + +
Sbjct: 11 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTI 70
Query: 133 RYEDFV 138
+E+F+
Sbjct: 71 DFEEFL 76
>pdb|1J7O|A Chain A, Solution Structure Of Calcium-calmodulin N-terminal
Domain
Length = 76
Score = 53.9 bits (128), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 43/71 (60%), Gaps = 7/71 (9%)
Query: 4 HFREQDIDEFRECFFLFARNG--TIKTLDELSVIMRSLGMSPTIAELKKYL----AEKGG 57
E+ I EF+E F LF ++G TI T EL +MRSLG +PT AEL+ + A+ G
Sbjct: 3 QLTEEQIAEFKEAFSLFDKDGDGTITT-KELGTVMRSLGQNPTEAELQDMINEVDADGNG 61
Query: 58 KLSFPDFLKVM 68
+ FP+FL +M
Sbjct: 62 TIDFPEFLTMM 72
Score = 28.5 bits (62), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 14/61 (22%), Positives = 28/61 (45%)
Query: 80 EVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVK 139
E +AF D GT+ K L V+ + G+ + E+ + E + N + + +F+
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 140 I 140
+
Sbjct: 71 M 71
>pdb|2I08|A Chain A, Solvation Effect In Conformational Changes Of Ef-Hand
Proteins: X-Ray Structure Of Ca2+-Saturated Double
Mutant Q41l-K75i Of N-Domain Of Calmodulin
Length = 78
Score = 53.9 bits (128), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 44/71 (61%), Gaps = 7/71 (9%)
Query: 4 HFREQDIDEFRECFFLFARNG--TIKTLDELSVIMRSLGMSPTIAELKKYL----AEKGG 57
E+ I EF+E F L+ ++G TI T EL +MRSLG++PT AEL+ + A+ G
Sbjct: 3 QLTEEQIAEFKEAFSLYDKDGDGTITT-KELGTVMRSLGLNPTEAELQDMINEVDADGNG 61
Query: 58 KLSFPDFLKVM 68
+ FP+FL +M
Sbjct: 62 TIDFPEFLTMM 72
Score = 26.6 bits (57), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 14/63 (22%), Positives = 27/63 (42%)
Query: 80 EVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVK 139
E +AF D GT+ K L V+ + G + E+ + E + N + + +F+
Sbjct: 11 EFKEAFSLYDKDGDGTITTKELGTVMRSLGLNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 140 IAC 142
+
Sbjct: 71 MMA 73
>pdb|3I5G|C Chain C, Crystal Structure Of Rigor-Like Squid Myosin S1
pdb|3I5H|C Chain C, The Crystal Structure Of Rigor Like Squid Myosin S1 In The
Absence Of Nucleotide
pdb|3I5I|C Chain C, The Crystal Structure Of Squid Myosin S1 In The Presence
Of So4 2-
pdb|3I5F|C Chain C, Crystal Structure Of Squid Mg.Adp Myosin S1
Length = 159
Score = 53.5 bits (127), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 78/158 (49%), Gaps = 17/158 (10%)
Query: 4 HFREQDIDEFRECFFLF----ARNGTIKTLDELSVIMRSLGMSPTIAELKKY-----LAE 54
+ +I+E RE F LF R+G + ++ ++R LGM+PT A++ ++ + E
Sbjct: 2 QLTKDEIEEVREVFDLFDFWDGRDGDVDAA-KVGDLLRCLGMNPTEAQVHQHGGTKKMGE 60
Query: 55 KGGKLSFPDFLKVMHTHSKAE--DIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGL 112
K KL + L + S + E ++AFK D G + + +++VL GE +
Sbjct: 61 KAYKLE--EILPIYEEMSSKDTGTAADEFMEAFKTFDREGQGLISSAEIRNVLKMLGERI 118
Query: 113 SSKEVDQIFREANV--TMNSKVRYEDFV-KIACAPVPD 147
+ + + IF ++ ++ ++YED + K+ P PD
Sbjct: 119 TEDQCNDIFTFCDIREDIDGNIKYEDLMKKVMAGPFPD 156
>pdb|2BL0|C Chain C, Physarum Polycephalum Myosin Ii Regulatory Domain
Length = 142
Score = 53.1 bits (126), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 67/138 (48%), Gaps = 14/138 (10%)
Query: 10 IDEFRECFFLF--ARNGTIKTLDELSVIMRSLGMSPTIAELKKYLAEK----GGKLSFPD 63
+ EF+E F LF R G I T + L +++ G+ A + E GK+ FP+
Sbjct: 5 VSEFKEAFELFDSERTGFI-TKEGLQTVLKQFGVRVEPAAFNEMFNEADATGNGKIQFPE 63
Query: 64 FLKVMHTHSK---AEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQI 120
FL +M K +EDI ++ AF+ D +G +P L+ L+N G+ L E +
Sbjct: 64 FLSMMGRRMKQTTSEDILRQ---AFRTFDPEGTGYIPKAALQDALLNLGDRLKPHEFAE- 119
Query: 121 FREANVTMNSKVRYEDFV 138
F T ++RY++F+
Sbjct: 120 FLGITETEKGQIRYDNFI 137
Score = 37.0 bits (84), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/67 (25%), Positives = 38/67 (56%)
Query: 74 AEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVR 133
+D E +AF+ D+ ++G + + L+ VL +G + +++F EA+ T N K++
Sbjct: 1 GDDQVSEFKEAFELFDSERTGFITKEGLQTVLKQFGVRVEPAAFNEMFNEADATGNGKIQ 60
Query: 134 YEDFVKI 140
+ +F+ +
Sbjct: 61 FPEFLSM 67
>pdb|1TNW|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
pdb|1TNX|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
Length = 162
Score = 52.8 bits (125), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 71/143 (49%), Gaps = 10/143 (6%)
Query: 7 EQDIDEFRECFFLF-ARNGTIKTLDELSVIMRSLGMSPTIAELKKYLAE----KGGKLSF 61
E+ I EF+ F +F A G + EL +MR LG +PT EL + E G + F
Sbjct: 16 EEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDF 75
Query: 62 PDFLKVMHTHSKAEDI----PKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEV 117
+FL VM ED +E+ + F+ D G + + L +L GE + +++
Sbjct: 76 EEFL-VMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVIEEDI 134
Query: 118 DQIFREANVTMNSKVRYEDFVKI 140
+ + ++++ + ++ +++F+K+
Sbjct: 135 EDLMKDSDKNNDGRIDFDEFLKM 157
Score = 30.4 bits (67), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 33/66 (50%), Gaps = 4/66 (6%)
Query: 77 IPKEVVDAFKAA----DTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKV 132
+ +E++ FKAA D G + K L V+ G+ + +E+D I E + + +
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTI 73
Query: 133 RYEDFV 138
+E+F+
Sbjct: 74 DFEEFL 79
>pdb|1M39|A Chain A, Solution Structure Of The C-Terminal Fragment (F86-I165)
Of The Human Centrin 2 In Calcium Saturated Form
Length = 89
Score = 51.6 bits (122), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 47/82 (57%)
Query: 59 LSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVD 118
++F DFL VM +D +E++ AFK D ++G + K LK V GE L+ +E+
Sbjct: 1 MNFGDFLTVMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQ 60
Query: 119 QIFREANVTMNSKVRYEDFVKI 140
++ EA+ + +V ++F++I
Sbjct: 61 EMIDEADRDGDGEVSEQEFLRI 82
>pdb|2OS8|B Chain B, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
pdb|2OTG|B Chain B, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
Length = 157
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 64/136 (47%), Gaps = 4/136 (2%)
Query: 7 EQDIDEFRECFFLF--ARNGTIKTLDELSVIMRSLGMSPTIAELKKYLAEKGGKLSFPDF 64
++ I E +E F + R+G I +++L + SLG +P EL L E G L+F F
Sbjct: 15 QKQIQEMKEAFTMIDQNRDGFID-INDLKEMFSSLGRTPDDKELTAMLKEAPGPLNFTMF 73
Query: 65 LKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREA 124
L + D + + +AF D + + +Y+K +L N G+ + E+ F+EA
Sbjct: 74 LSIFSDKLSGTDSEETIRNAFGMFDELDTKKLNIEYIKDLLENMGDNFNKDEMRMTFKEA 133
Query: 125 NVTMNSKVRYEDFVKI 140
V K Y FV +
Sbjct: 134 PVE-GGKFDYVRFVAM 148
>pdb|3TUY|B Chain B, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
pdb|3TUY|E Chain E, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
Length = 161
Score = 50.1 bits (118), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 62/133 (46%), Gaps = 4/133 (3%)
Query: 10 IDEFRECFFLF--ARNGTIKTLDELSVIMRSLGMSPTIAELKKYLAEKGGKLSFPDFLKV 67
+ E +E F + R+G I +++L + SLG +P EL L E G L+F FL +
Sbjct: 22 MQEMKEAFTMIDQNRDGFID-INDLKEMFSSLGRTPDDKELTAMLKEAPGPLNFTMFLSI 80
Query: 68 MHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVT 127
D + + +AF D + + +Y+K +L N G+ + E+ F+EA V
Sbjct: 81 FSDKLSGTDSEETIRNAFGMFDELDTKKLNIEYIKDLLENMGDNFNKDEMRMTFKEAPVE 140
Query: 128 MNSKVRYEDFVKI 140
K Y FV +
Sbjct: 141 -GGKFDYVRFVAM 152
>pdb|3PN7|B Chain B, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3PN7|E Chain E, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3TS5|B Chain B, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
pdb|3TS5|E Chain E, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
Length = 161
Score = 50.1 bits (118), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 62/133 (46%), Gaps = 4/133 (3%)
Query: 10 IDEFRECFFLF--ARNGTIKTLDELSVIMRSLGMSPTIAELKKYLAEKGGKLSFPDFLKV 67
+ E +E F + R+G I +++L + SLG +P EL L E G L+F FL +
Sbjct: 22 MQEMKEAFTMIDQNRDGFID-INDLKEMFSSLGRTPDDKELTAMLKEAPGPLNFTMFLSI 80
Query: 68 MHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVT 127
D + + +AF D + + +Y+K +L N G+ + E+ F+EA V
Sbjct: 81 FSDKLSGTDSEETIRNAFGMFDELDTKKLNIEYIKDLLENMGDNFNKDEMRMTFKEAPVE 140
Query: 128 MNSKVRYEDFVKI 140
K Y FV +
Sbjct: 141 -GGKFDYVRFVAM 152
>pdb|1DFK|Y Chain Y, Nucleotide-Free Scallop Myosin S1-Near Rigor State
pdb|1DFL|Y Chain Y, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
pdb|1DFL|W Chain W, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
Length = 139
Score = 50.1 bits (118), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 57/122 (46%), Gaps = 3/122 (2%)
Query: 7 EQDIDEFRECFFLFA--RNGTIKTLDELSVIMRSLGMSPTIAELKKYLAEKGGKLSFPDF 64
++ I E +E F + R+G + D + I LG +P EL L E G L+F F
Sbjct: 3 QKQIQEMKEAFSMIDVDRDGFVSKED-IKAISEQLGRAPDDKELTAMLKEAPGPLNFTMF 61
Query: 65 LKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREA 124
L + D + + +AF D ++ + +Y+K +L N G+ + E+ F+EA
Sbjct: 62 LSIFSDKLSGTDSEETIRNAFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEMRMTFKEA 121
Query: 125 NV 126
V
Sbjct: 122 PV 123
>pdb|1KK8|B Chain B, Scallop Myosin (S1-Adp-Befx) In The Actin-Detached
Conformation
Length = 139
Score = 50.1 bits (118), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 57/122 (46%), Gaps = 3/122 (2%)
Query: 7 EQDIDEFRECFFLFA--RNGTIKTLDELSVIMRSLGMSPTIAELKKYLAEKGGKLSFPDF 64
++ I E +E F + R+G + D + I LG +P EL L E G L+F F
Sbjct: 2 QKQIQEMKEAFSMIDVDRDGFVSKED-IKAISEQLGRAPDDKELTAMLKEAPGPLNFTMF 60
Query: 65 LKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREA 124
L + D + + +AF D ++ + +Y+K +L N G+ + E+ F+EA
Sbjct: 61 LSIFSDKLSGTDSEETIRNAFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEMRMTFKEA 120
Query: 125 NV 126
V
Sbjct: 121 PV 122
>pdb|1SCM|B Chain B, Structure Of The Regulatory Domain Of Scallop Myosin At
2.8 Angstroms Resolution
Length = 145
Score = 49.7 bits (117), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 57/122 (46%), Gaps = 3/122 (2%)
Query: 7 EQDIDEFRECFFLFA--RNGTIKTLDELSVIMRSLGMSPTIAELKKYLAEKGGKLSFPDF 64
++ I E +E F + R+G + D + I LG +P EL L E G L+F F
Sbjct: 3 QKQIQEMKEAFSMIDVDRDGFVSKED-IKAISEQLGRAPDDKELTAMLKEAPGPLNFTMF 61
Query: 65 LKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREA 124
L + D + + +AF D ++ + +Y+K +L N G+ + E+ F+EA
Sbjct: 62 LSIFSDKLSGTDSEETIRNAFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEMRMTFKEA 121
Query: 125 NV 126
V
Sbjct: 122 PV 123
>pdb|1WDC|B Chain B, Scallop Myosin Regulatory Domain
pdb|1B7T|Y Chain Y, Myosin Digested By Papain
pdb|1KK7|Y Chain Y, Scallop Myosin In The Near Rigor Conformation
pdb|1L2O|B Chain B, Scallop Myosin S1-Adp-P-Pdm In The Actin-Detached
Conformation
pdb|1KQM|B Chain B, Scallop Myosin S1-Amppnp In The Actin-Detached
Conformation
pdb|1KWO|B Chain B, Scallop Myosin S1-Atpgammas-P-Pdm In The Actin-Detached
Conformation
pdb|1QVI|Y Chain Y, Crystal Structure Of Scallop Myosin S1 In The Pre-Power
Stroke State To 2.6 Angstrom Resolution: Flexibility And
Function In The Head
pdb|1S5G|Y Chain Y, Structure Of Scallop Myosin S1 Reveals A Novel Nucleotide
Conformation
pdb|1SR6|B Chain B, Structure Of Nucleotide-free Scallop Myosin S1
pdb|3JTD|B Chain B, Calcium-Free Scallop Myosin Regulatory Domain With
Elc-D19a Point Mutation
pdb|3JVT|B Chain B, Calcium-Bound Scallop Myosin Regulatory Domain (Lever Arm)
With Reconstituted Complete Light Chains
Length = 156
Score = 49.7 bits (117), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 57/122 (46%), Gaps = 3/122 (2%)
Query: 7 EQDIDEFRECFFLFA--RNGTIKTLDELSVIMRSLGMSPTIAELKKYLAEKGGKLSFPDF 64
++ I E +E F + R+G + D + I LG +P EL L E G L+F F
Sbjct: 14 QKQIQEMKEAFSMIDVDRDGFVSKED-IKAISEQLGRAPDDKELTAMLKEAPGPLNFTMF 72
Query: 65 LKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREA 124
L + D + + +AF D ++ + +Y+K +L N G+ + E+ F+EA
Sbjct: 73 LSIFSDKLSGTDSEETIRNAFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEMRMTFKEA 132
Query: 125 NV 126
V
Sbjct: 133 PV 134
>pdb|2W4T|Y Chain Y, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4V|Y Chain Y, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
pdb|2W4W|Y Chain Y, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
Length = 136
Score = 49.3 bits (116), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 55/119 (46%), Gaps = 3/119 (2%)
Query: 10 IDEFRECFFLFA--RNGTIKTLDELSVIMRSLGMSPTIAELKKYLAEKGGKLSFPDFLKV 67
I E +E F + R+G + D + I LG +P EL L E G L+F FL +
Sbjct: 3 IQEMKEAFSMIDVDRDGFVSKED-IKAISEQLGRAPDDKELTAMLKEAPGPLNFTMFLSI 61
Query: 68 MHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANV 126
D + + +AF D ++ + +Y+K +L N G+ + E+ F+EA V
Sbjct: 62 FSDKLSGTDSEETIRNAFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEMRMTFKEAPV 120
>pdb|1F54|A Chain A, Solution Structure Of The Apo N-Terminal Domain Of Yeast
Calmodulin
pdb|1F55|A Chain A, Solution Structure Of The Calcium Bound N-Terminal
Domain Of Yeast Calmodulin
Length = 77
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 45/78 (57%), Gaps = 7/78 (8%)
Query: 2 AHHFREQDIDEFRECFFLFAR--NGTIKTLDELSVIMRSLGMSPTIAELKKYLAE----K 55
+ + E+ I EF+E F LF + NG+I + EL+ +MRSLG+SP+ AE+ + E
Sbjct: 1 SSNLTEEQIAEFKEAFALFDKDNNGSISS-SELATVMRSLGLSPSEAEVNDLMNEIDVDG 59
Query: 56 GGKLSFPDFLKVMHTHSK 73
++ F +FL +M K
Sbjct: 60 NHQIEFSEFLALMSRQLK 77
>pdb|2EC6|B Chain B, Placopecten Striated Muscle Myosin Ii
Length = 133
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 61/133 (45%), Gaps = 4/133 (3%)
Query: 10 IDEFRECFFLF--ARNGTIKTLDELSVIMRSLGMSPTIAELKKYLAEKGGKLSFPDFLKV 67
+ E +E F + R+G I +++L SLG +P EL L E G L+F FL +
Sbjct: 1 MQEMKEAFTMIDQNRDGFID-INDLKEEFSSLGRTPDDKELTAMLKEAPGPLNFTMFLSI 59
Query: 68 MHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVT 127
D + + +AF D + + +Y+K +L N G+ + E+ F+EA V
Sbjct: 60 FSDKLSGTDSEETIRNAFGMFDEDATKKLNIEYIKDLLENMGDNFNKDEMRMTFKEAPVE 119
Query: 128 MNSKVRYEDFVKI 140
K Y FV +
Sbjct: 120 -GGKFDYVRFVAM 131
>pdb|1ZMZ|A Chain A, Solution Structure Of The N-Terminal Domain (M1-S98) Of
Human Centrin 2
Length = 98
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 40/68 (58%), Gaps = 7/68 (10%)
Query: 7 EQDIDEFRECFFLFARNGTIKTLD--ELSVIMRSLGMSPTIAELKKYLA----EKGGKLS 60
E+ E RE F LF +GT T+D EL V MR+LG P E+KK ++ E GK++
Sbjct: 27 EEQKQEIREAFDLFDADGT-GTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMN 85
Query: 61 FPDFLKVM 68
F DFL VM
Sbjct: 86 FGDFLTVM 93
Score = 27.3 bits (59), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 16/66 (24%), Positives = 32/66 (48%)
Query: 75 EDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRY 134
E+ +E+ +AF D +GT+ K LK + G +E+ ++ E + K+ +
Sbjct: 27 EEQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNF 86
Query: 135 EDFVKI 140
DF+ +
Sbjct: 87 GDFLTV 92
>pdb|2JNF|A Chain A, Solution Structure Of Fly Troponin C, Isoform F1
Length = 158
Score = 45.1 bits (105), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/129 (20%), Positives = 62/129 (48%), Gaps = 9/129 (6%)
Query: 23 NGTIKTLDELSVIMRSLGMSPTIAELKKYLAE----KGGKLSFPDF----LKVMHTHSKA 74
+G + T D++ +I+ LG+ T + +++ + E G + F F + +
Sbjct: 28 SGRVST-DQIGIILEVLGIQQTKSTIRQLIDEFDPFGNGDIDFDSFKIIGARFLGEEVNP 86
Query: 75 EDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRY 134
E + +E+ +AF+ D +G + ++ +L E LSS+++D + E + + V +
Sbjct: 87 EQMQQELREAFRLYDKEGNGYISTDVMREILAELDETLSSEDLDAMIDEIDADGSGTVDF 146
Query: 135 EDFVKIACA 143
E+F+ +
Sbjct: 147 EEFMGVMTG 155
>pdb|2HF5|A Chain A, The Structure And Function Of A Novel Two-Site Calcium-
Binding Fragment Of Calmodulin
Length = 68
Score = 45.1 bits (105), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 4/68 (5%)
Query: 46 AELKKYL----AEKGGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYL 101
AEL+ + A+ G + FP+FL +M K D +E+ +AF+ D +G + A L
Sbjct: 1 AELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAEL 60
Query: 102 KHVLVNWG 109
+HV+ N G
Sbjct: 61 RHVMTNLG 68
>pdb|2B1U|A Chain A, Solution Structure Of Calmodulin-Like Skin Protein C
Terminal Domain
Length = 71
Score = 44.3 bits (103), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 32/57 (56%)
Query: 84 AFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFVKI 140
AF+A D G + L+ + G+ L +E+D + REA+V + +V YE+F ++
Sbjct: 11 AFRAFDQDGDGHITVDELRRAMAGLGQPLPQEELDAMIREADVDQDGRVNYEEFARM 67
>pdb|2ROA|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 N-Terminal Domain
Length = 79
Score = 44.3 bits (103), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 43/77 (55%), Gaps = 5/77 (6%)
Query: 2 AHHFREQDIDEFRECFFLFARNGT-IKTLDELSVIMRSLGMSPTIAELKKYLAE----KG 56
A E+ I +F+E F LF ++G T++EL+ ++RSL +PT EL+ ++E
Sbjct: 1 ADILSEEQIVDFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGN 60
Query: 57 GKLSFPDFLKVMHTHSK 73
G + F +FL +M K
Sbjct: 61 GTIEFDEFLSLMAKKVK 77
>pdb|2KSZ|A Chain A, The Solution Structure Of The Magnesium Bound Soybean
Calmod Isoform 4 N-Domain
Length = 76
Score = 43.9 bits (102), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 42/72 (58%), Gaps = 5/72 (6%)
Query: 2 AHHFREQDIDEFRECFFLFARNGT-IKTLDELSVIMRSLGMSPTIAELKKYLAE----KG 56
A E+ I +F+E F LF ++G T++EL+ ++RSL +PT EL+ ++E
Sbjct: 1 ADILSEEQIVDFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGN 60
Query: 57 GKLSFPDFLKVM 68
G + F +FL +M
Sbjct: 61 GTIEFDEFLSLM 72
>pdb|1OQP|A Chain A, Structure Of The Ca2+C-Terminal Domain Of Caltractin In
Complex With The Cdc31p-Binding Domain From Kar1p
Length = 77
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 40/69 (57%)
Query: 72 SKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSK 131
S D +E++ AF+ D SGT+ K L+ V GE L+ +E+ ++ EA+ +++
Sbjct: 2 SGERDSREEILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNE 61
Query: 132 VRYEDFVKI 140
+ ++F++I
Sbjct: 62 IDEDEFIRI 70
>pdb|1M46|A Chain A, Crystal Structure Of Mlc1p Bound To Iq4 Of Myo2p, A Class
V Myosin
pdb|1M45|A Chain A, Crystal Structure Of Mlc1p Bound To Iq2 Of Myo2p, A Class
V Myosin
pdb|1N2D|A Chain A, Ternary Complex Of Mlc1p Bound To Iq2 And Iq3 Of Myo2p, A
Class V Myosin
pdb|1N2D|B Chain B, Ternary Complex Of Mlc1p Bound To Iq2 And Iq3 Of Myo2p, A
Class V Myosin
Length = 148
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 61/137 (44%), Gaps = 11/137 (8%)
Query: 14 RECFFLFARNGTIKTL-DELSVIMRSLGMSPTIAELKKYLA-----EKGGKLSFPDFLKV 67
++ F LF + G D L +R++G +PT ++ + L+ +
Sbjct: 7 KDIFTLFDKKGQGAIAKDSLGDYLRAIGYNPTNQLVQDIINADSSLRDASSLTLDQITGL 66
Query: 68 MHTHSKAEDIP-----KEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFR 122
+ + K D ++ V AF+ D +G V L+++L GE L+ EVD++ +
Sbjct: 67 IEVNEKELDATTKAKTEDFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLK 126
Query: 123 EANVTMNSKVRYEDFVK 139
V N ++ Y+ F++
Sbjct: 127 GVEVDSNGEIDYKKFIE 143
>pdb|2AMI|A Chain A, Solution Structure Of The Calcium-Loaded N-Terminal
Sensor Domain Of Centrin
Length = 96
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 38/68 (55%), Gaps = 7/68 (10%)
Query: 7 EQDIDEFRECFFLFARNGTIKTLD--ELSVIMRSLGMSPTIAELKKYLAE----KGGKLS 60
E+ E RE F LF +G+ T+D EL V MR+LG P E+KK ++E G +
Sbjct: 26 EEQKQEIREAFDLFDTDGS-GTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTID 84
Query: 61 FPDFLKVM 68
F +FL +M
Sbjct: 85 FEEFLTMM 92
Score = 32.3 bits (72), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 37/71 (52%)
Query: 75 EDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRY 134
E+ +E+ +AF DT SGT+ AK LK + G +E+ ++ E + + + +
Sbjct: 26 EEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTIDF 85
Query: 135 EDFVKIACAPV 145
E+F+ + A +
Sbjct: 86 EEFLTMMTAKM 96
>pdb|3FWB|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|E Chain E, Sac3:sus1:cdc31 Complex
pdb|3FWC|I Chain I, Sac3:sus1:cdc31 Complex
pdb|3FWC|M Chain M, Sac3:sus1:cdc31 Complex
Length = 161
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 62/142 (43%), Gaps = 7/142 (4%)
Query: 7 EQDIDEFRECFFLFARNGTIKTLD--ELSVIMRSLGMSPTIAEL----KKYLAEKGGKLS 60
E+ E E F LF N LD EL V M++LG E+ +Y +E +
Sbjct: 19 EEQKQEIYEAFSLFDMNND-GFLDYHELKVAMKALGFELPKREILDLIDEYDSEGRHLMK 77
Query: 61 FPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQI 120
+ DF VM D E+ AF+ D +G + K L+ V GE L+ +E+ +
Sbjct: 78 YDDFYIVMGEKILKRDPLDEIKRAFQLFDDDHTGKISIKNLRRVAKELGETLTDEELRAM 137
Query: 121 FREANVTMNSKVRYEDFVKIAC 142
E ++ + ++ +F+ I
Sbjct: 138 IEEFDLDGDGEINENEFIAICT 159
>pdb|2A4J|A Chain A, Solution Structure Of The C-Terminal Domain (T94-Y172) Of
The Human Centrin 2 In Complex With A 17 Residues
Peptide (P1-Xpc) From Xeroderma Pigmentosum Group C
Protein
pdb|2K2I|A Chain A, Nmr Solution Structure Of The C-Terminal Domain (T94-Y172)
Of The Human Centrin 2 In Complex With A Repeat Sequence
Of Human Sfi1 (R641-T660)
Length = 79
Score = 40.8 bits (94), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 38/65 (58%)
Query: 76 DIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYE 135
D +E++ AFK D ++G + K LK V GE L+ +E+ ++ EA+ + +V +
Sbjct: 8 DTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQ 67
Query: 136 DFVKI 140
+F++I
Sbjct: 68 EFLRI 72
>pdb|2LC5|A Chain A, Calmodulin-Like Protein From Entamoeba Histolytica:
Solution Structure And Calcium-Binding Properties Of A
Partially Folded Protein
Length = 85
Score = 40.4 bits (93), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 36/62 (58%), Gaps = 5/62 (8%)
Query: 12 EFRECFFLFARNGTIK-TLDELSVIMRSLGMSPT---IAEL-KKYLAEKGGKLSFPDFLK 66
E++E F LF ++ K T +EL +MR+LG +PT I+E+ K Y + GK FL
Sbjct: 15 EYKEAFQLFDKDNDNKLTAEELGTVMRALGANPTKQKISEIVKDYDKDNSGKFDQETFLT 74
Query: 67 VM 68
+M
Sbjct: 75 IM 76
>pdb|2FCE|A Chain A, Solution Structure Of C-Lobe Myosin Light Chain From
Saccharomices Cerevisiae
Length = 70
Score = 39.7 bits (91), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Query: 72 SKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSK 131
+K ED K AF+ D +G V L+++L GE L+ EVD++ + V N +
Sbjct: 2 AKTEDFVK----AFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGE 57
Query: 132 VRYEDFVK 139
+ Y+ F++
Sbjct: 58 IDYKKFIE 65
>pdb|2CTN|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr,
30 Structures
Length = 89
Score = 39.3 bits (90), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 9/81 (11%)
Query: 3 HHFREQDIDEFRECFFLF---ARNGTIKTLDELSVIMRSLGMSPTIAELKKYLAE----K 55
E+ +EF+ F +F A +G+I T EL +MR LG +PT EL++ + E
Sbjct: 10 EQLTEEQKNEFKAAFDIFVLGAEDGSIST-KELGKVMRMLGQNPTPEELQEMIDEVDEDG 68
Query: 56 GGKLSFPDFLKVMHTHSKAED 76
G + F +FL VM S +D
Sbjct: 69 SGTVDFDEFL-VMMVRSMKDD 88
>pdb|2KFX|T Chain T, Structure Of The N-Terminal Domain Of Human Cardiac
Troponin C Bound To Calcium Ion And To The Inhibitor W7
Length = 89
Score = 39.3 bits (90), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 9/81 (11%)
Query: 3 HHFREQDIDEFRECFFLF---ARNGTIKTLDELSVIMRSLGMSPTIAELKKYLAE----K 55
E+ +EF+ F +F A +G+I T EL +MR LG +PT EL++ + E
Sbjct: 10 EQLTEEQKNEFKAAFDIFVLGAEDGSIST-KELGKVMRMLGQNPTPEELQEMIDEVDEDG 68
Query: 56 GGKLSFPDFLKVMHTHSKAED 76
G + F +FL VM S +D
Sbjct: 69 SGTVDFDEFL-VMMVRSMKDD 88
>pdb|1WRK|A Chain A, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Orthrombic Crystal Form)
pdb|1WRK|B Chain B, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Orthrombic Crystal Form)
pdb|1WRL|A Chain A, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|B Chain B, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|C Chain C, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|D Chain D, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|E Chain E, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|F Chain F, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
Length = 88
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 9/81 (11%)
Query: 3 HHFREQDIDEFRECFFLF---ARNGTIKTLDELSVIMRSLGMSPTIAELKKYLAE----K 55
E+ +EF+ F +F A +G+I T EL +MR LG +PT EL++ + E
Sbjct: 10 EQLTEEQKNEFKAAFDIFVLGAEDGSIST-KELGKVMRMLGQNPTPEELQEMIDEVDEDG 68
Query: 56 GGKLSFPDFLKVMHTHSKAED 76
G + F +FL VM S +D
Sbjct: 69 SGTVDFDEFL-VMMVRSMKDD 88
>pdb|2K7C|A Chain A, Nmr Structure Of Mg2+-Bound Cabp1 C-Domain
pdb|2K7D|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain
Length = 72
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 16/63 (25%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 79 KEVVDAFKAADTTKSGTVPAKYLKHVLVN-WGEGLSSKEVDQIFREANVTMNSKVRYEDF 137
KE+ DAF+ DT G + L+ + G + +++++I R+ ++ + +V +E+F
Sbjct: 7 KELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEEF 66
Query: 138 VKI 140
V++
Sbjct: 67 VRM 69
>pdb|4GJG|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C Mutant D2n/v28i/l29q/g30d (niqd) In
Complex With Cadmium
Length = 89
Score = 37.4 bits (85), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 38/73 (52%), Gaps = 8/73 (10%)
Query: 3 HHFREQDIDEFRECFFLF---ARNGTIKTLDELSVIMRSLGMSPTIAELKKYLAE----K 55
E+ +EF+ F +F A +G I T EL +MR LG +PT EL++ + E
Sbjct: 10 EQLTEEQKNEFKAAFDIFIQDAEDGCIST-KELGKVMRMLGQNPTPEELQEMIDEVDEDG 68
Query: 56 GGKLSFPDFLKVM 68
G + F +FL +M
Sbjct: 69 SGTVDFDEFLVMM 81
>pdb|4GJF|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C Mutant L29q In Complex With Cadmium
Length = 89
Score = 37.4 bits (85), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 38/73 (52%), Gaps = 8/73 (10%)
Query: 3 HHFREQDIDEFRECFFLF---ARNGTIKTLDELSVIMRSLGMSPTIAELKKYLAE----K 55
E+ +EF+ F +F A +G I T EL +MR LG +PT EL++ + E
Sbjct: 10 EQLTEEQKNEFKAAFDIFVQGAEDGCIST-KELGKVMRMLGQNPTPEELQEMIDEVDEDG 68
Query: 56 GGKLSFPDFLKVM 68
G + F +FL +M
Sbjct: 69 SGTVDFDEFLVMM 81
>pdb|1MXL|C Chain C, Structure Of Cardiac Troponin C-troponin I Complex
pdb|1LXF|C Chain C, Structure Of The Regulatory N-Domain Of Human Cardiac
Troponin C In Complex With Human Cardiac
Troponin-I(147- 163) And Bepridil
pdb|1AP4|A Chain A, Regulatory Domain Of Human Cardiac Troponin C In The
Calcium-Saturated State, Nmr, 40 Structures
pdb|1SPY|A Chain A, Regulatory Domain Of Human Cardiac Troponin C In The
Calcium-Free State, Nmr, 40 Structures
pdb|2KRD|C Chain C, Solution Structure Of The Regulatory Domain Of Human
Cardiac C In Complex With The Switch Region Of Cardiac
Troponin I A
pdb|2L1R|A Chain A, The Structure Of The Calcium-Sensitizer, Dfbp-O, In
Complex With The N-Domain Of Troponin C And The Switch
Region Of Troponin I
pdb|3SD6|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C In Complex With Cadmium At 1.4
Resolution.
pdb|3SWB|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C In Complex With Cadmium At 1.7 A
Resolution
pdb|4GJE|A Chain A, Crystal Structure Of The Refolded Amino-terminal Domain
Of Human Cardiac Troponin C In Complex With Cadmium
Length = 89
Score = 37.4 bits (85), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 38/73 (52%), Gaps = 8/73 (10%)
Query: 3 HHFREQDIDEFRECFFLF---ARNGTIKTLDELSVIMRSLGMSPTIAELKKYLAE----K 55
E+ +EF+ F +F A +G I T EL +MR LG +PT EL++ + E
Sbjct: 10 EQLTEEQKNEFKAAFDIFVLGAEDGCIST-KELGKVMRMLGQNPTPEELQEMIDEVDEDG 68
Query: 56 GGKLSFPDFLKVM 68
G + F +FL +M
Sbjct: 69 SGTVDFDEFLVMM 81
>pdb|1NPQ|A Chain A, Structure Of A Rhodamine-Labeled N-Domain Troponin C
Mutant (Ca2+ Saturated) In Complex With Skeletal
Troponin I 115- 131
Length = 90
Score = 36.6 bits (83), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 35/74 (47%), Gaps = 5/74 (6%)
Query: 5 FREQDIDEFRECFFLF-ARNGTIKTLDELSVIMRSLGMSPTIAELKKYLAE----KGGKL 59
E+ I EF+ F +F A G + EL +MR LG +PT EL + E G +
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKCELDAIICEVDEDGSGTI 73
Query: 60 SFPDFLKVMHTHSK 73
F +FL +M K
Sbjct: 74 DFEEFLVMMVRQMK 87
Score = 28.5 bits (62), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 32/66 (48%), Gaps = 4/66 (6%)
Query: 77 IPKEVVDAFKAA----DTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKV 132
+ +E++ FKAA D G + K L V+ G+ + E+D I E + + +
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKCELDAIICEVDEDGSGTI 73
Query: 133 RYEDFV 138
+E+F+
Sbjct: 74 DFEEFL 79
>pdb|3TZ1|A Chain A, Crystal Structure Of The Ca2+-saturated C-terminal Domain
Of Akazara Scallop Troponin C In Complex With A Troponin
I Fragment
Length = 74
Score = 36.6 bits (83), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 16/60 (26%), Positives = 32/60 (53%)
Query: 78 PKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDF 137
+E+ +AF+ D K G + L+ +L + G+ L+ E++ + E + + V YE+F
Sbjct: 6 ERELKEAFRVLDKEKKGVIKVDVLRWILKSLGDELTEDEIENMIAETDTDGSGTVDYEEF 65
>pdb|1R2U|A Chain A, Nmr Structure Of The N Domain Of Trout Cardiac Troponin
C At 30 C
pdb|1R6P|A Chain A, Nmr Structure Of The N-Terminal Domain Of Trout Cardiac
Troponin C At 7 C
Length = 89
Score = 36.2 bits (82), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 38/73 (52%), Gaps = 8/73 (10%)
Query: 3 HHFREQDIDEFRECFFLF---ARNGTIKTLDELSVIMRSLGMSPTIAELKKYLAE----K 55
++ +EF+ F +F A +G I T EL +MR LG +PT EL++ + E
Sbjct: 10 EQLTDEQKNEFKAAFDIFIQDAEDGCIST-KELGKVMRMLGQNPTPEELQEMIDEVDEDG 68
Query: 56 GGKLSFPDFLKVM 68
G + F +FL +M
Sbjct: 69 SGTVDFDEFLVMM 81
>pdb|2JXL|A Chain A, Solution Structure Of Cardiac N-Domain Troponin C Mutant
F77w-V82a
Length = 89
Score = 35.8 bits (81), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 38/73 (52%), Gaps = 8/73 (10%)
Query: 3 HHFREQDIDEFRECFFLF---ARNGTIKTLDELSVIMRSLGMSPTIAELKKYLAE----K 55
E+ +EF+ F +F A +G I T EL +MR LG +PT EL++ + E
Sbjct: 10 EQLTEEQKNEFKAAFDIFVLGAEDGCIST-KELGKVMRMLGQNPTPEELQEMIDEVDEDG 68
Query: 56 GGKLSFPDFLKVM 68
G + F ++L +M
Sbjct: 69 SGTVDFDEWLVMM 81
>pdb|1AVS|A Chain A, X-Ray Crystallographic Study Of Calcium-Saturated N-
Terminal Domain Of Troponin C
pdb|1AVS|B Chain B, X-Ray Crystallographic Study Of Calcium-Saturated N-
Terminal Domain Of Troponin C
pdb|1BLQ|A Chain A, Structure And Interaction Site Of The Regulatory Domain
Of Troponin-C When Complexed With The 96-148 Region Of
Troponin-I, Nmr, 29 Structures
pdb|1SKT|A Chain A, Solution Structure Of Apo N-Domain Of Troponin C, Nmr,
40 Structures
pdb|1TNP|A Chain A, Structures Of The Apo And Calcium Troponin-C Regulatory
Domains: The Muscle Contraction Switch
pdb|1TNQ|A Chain A, Structures Of The Apo And Calcium Troponin-C Regulatory
Domains: The Muscle Contraction Switch
pdb|1ZAC|A Chain A, N-Domain Of Troponin C From Chicken Skeletal Muscle,
Nmr, Minimized Average Structure
Length = 90
Score = 35.8 bits (81), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 35/72 (48%), Gaps = 5/72 (6%)
Query: 7 EQDIDEFRECFFLF-ARNGTIKTLDELSVIMRSLGMSPTIAELKKYLAE----KGGKLSF 61
E+ I EF+ F +F A G + EL +MR LG +PT EL + E G + F
Sbjct: 16 EEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDF 75
Query: 62 PDFLKVMHTHSK 73
+FL +M K
Sbjct: 76 EEFLVMMVRQMK 87
Score = 30.4 bits (67), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 33/66 (50%), Gaps = 4/66 (6%)
Query: 77 IPKEVVDAFKAA----DTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKV 132
+ +E++ FKAA D G + K L V+ G+ + +E+D I E + + +
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTI 73
Query: 133 RYEDFV 138
+E+F+
Sbjct: 74 DFEEFL 79
>pdb|2KGB|C Chain C, Nmr Solution Of The Regulatory Domain Cardiac
F77w-Troponin C In Complex With The Cardiac Troponin I
144-163 Switch Peptide
Length = 89
Score = 35.8 bits (81), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 38/73 (52%), Gaps = 8/73 (10%)
Query: 3 HHFREQDIDEFRECFFLF---ARNGTIKTLDELSVIMRSLGMSPTIAELKKYLAE----K 55
E+ +EF+ F +F A +G I T EL +MR LG +PT EL++ + E
Sbjct: 10 EQLTEEQKNEFKAAFDIFVLGAEDGCIST-KELGKVMRMLGQNPTPEELQEMIDEVDEDG 68
Query: 56 GGKLSFPDFLKVM 68
G + F ++L +M
Sbjct: 69 SGTVDFDEWLVMM 81
>pdb|1TRF|A Chain A, Solution Structure Of The Tr1c Fragment Of Skeletal
Muscle Troponin-C
Length = 76
Score = 35.4 bits (80), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 35/72 (48%), Gaps = 5/72 (6%)
Query: 7 EQDIDEFRECFFLF-ARNGTIKTLDELSVIMRSLGMSPTIAELKKYLAE----KGGKLSF 61
E+ I EF+ F +F A G + EL +MR LG +PT EL + E G + F
Sbjct: 5 EEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDF 64
Query: 62 PDFLKVMHTHSK 73
+FL +M K
Sbjct: 65 EEFLVMMVRQMK 76
Score = 30.4 bits (67), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 33/66 (50%), Gaps = 4/66 (6%)
Query: 77 IPKEVVDAFKAA----DTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKV 132
+ +E++ FKAA D G + K L V+ G+ + +E+D I E + + +
Sbjct: 3 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTI 62
Query: 133 RYEDFV 138
+E+F+
Sbjct: 63 DFEEFL 68
>pdb|2K2A|A Chain A, Solution Structure Of The Apo C Terminal Domain Of
Lethoceru C Isoform F1
Length = 70
Score = 35.4 bits (80), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 15/67 (22%), Positives = 35/67 (52%)
Query: 77 IPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYED 136
+ +E+ +AF+ D +G + ++ +L E LSS+++D + E + + V +E+
Sbjct: 1 MQQELREAFRLYDKEGNGYISTDVMREILAELDETLSSEDLDAMIDEIDADGSGTVDFEE 60
Query: 137 FVKIACA 143
F+ +
Sbjct: 61 FMGVMTG 67
>pdb|2GV5|A Chain A, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|B Chain B, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|D Chain D, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|E Chain E, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|A Chain A, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|B Chain B, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|C Chain C, Crystal Structure Of Sfi1pCDC31P COMPLEX
Length = 161
Score = 34.7 bits (78), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 58/142 (40%), Gaps = 7/142 (4%)
Query: 7 EQDIDEFRECFFLFARNGTIKTLD--ELSVIMRSLGMSPTIAEL----KKYLAEKGGKLS 60
E+ E E F LF N LD EL V ++LG E+ +Y +E
Sbjct: 19 EEQKQEIYEAFSLFDXNND-GFLDYHELKVAXKALGFELPKREILDLIDEYDSEGRHLXK 77
Query: 61 FPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQI 120
+ DF V D E+ AF+ D +G + K L+ V GE L+ +E+
Sbjct: 78 YDDFYIVXGEKILKRDPLDEIKRAFQLFDDDHTGKISIKNLRRVAKELGETLTDEELRAX 137
Query: 121 FREANVTMNSKVRYEDFVKIAC 142
E ++ + ++ +F+ I
Sbjct: 138 IEEFDLDGDGEINENEFIAICT 159
>pdb|2LV7|A Chain A, Solution Structure Of Ca2+-Bound Cabp7 N-Terminal Doman
Length = 100
Score = 34.3 bits (77), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 5/67 (7%)
Query: 7 EQDIDEFRECFFLFARNGT-IKTLDELSVIMRSLGMSPTIAELKKYLA----EKGGKLSF 61
E +++E RE F +F R+G + EL MRSLG P EL+ + + G++ F
Sbjct: 32 EDELEEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQVDF 91
Query: 62 PDFLKVM 68
+F+ ++
Sbjct: 92 EEFVTLL 98
>pdb|1SMG|A Chain A, Calcium-Bound E41a Mutant Of The N-Domain Of Chicken
Troponin C, Nmr, 40 Structures
Length = 90
Score = 33.5 bits (75), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 34/74 (45%), Gaps = 5/74 (6%)
Query: 5 FREQDIDEFRECFFLF-ARNGTIKTLDELSVIMRSLGMSPTIAELKKYLAE----KGGKL 59
E+ I EF+ F +F A G + L +MR LG +PT EL + E G +
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKALGTVMRMLGQNPTKEELDAIIEEVDEDGSGTI 73
Query: 60 SFPDFLKVMHTHSK 73
F +FL +M K
Sbjct: 74 DFEEFLVMMVRQMK 87
Score = 30.8 bits (68), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 33/66 (50%), Gaps = 4/66 (6%)
Query: 77 IPKEVVDAFKAA----DTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKV 132
+ +E++ FKAA D G + K L V+ G+ + +E+D I E + + +
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKALGTVMRMLGQNPTKEELDAIIEEVDEDGSGTI 73
Query: 133 RYEDFV 138
+E+F+
Sbjct: 74 DFEEFL 79
>pdb|2JOJ|A Chain A, Nmr Solution Structure Of N-Terminal Domain Of Euplotes
Octocarinatus Centrin
Length = 77
Score = 32.7 bits (73), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 17/74 (22%), Positives = 37/74 (50%)
Query: 74 AEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVR 133
+E+ +E+ +AF DT K+G++ LK + G + E+ ++ E + N +
Sbjct: 2 SEEQKQEIKEAFDLFDTNKTGSIDYHELKVAMRALGFDVKKPEILELMNEYDREGNGYIG 61
Query: 134 YEDFVKIACAPVPD 147
++DF+ I + +
Sbjct: 62 FDDFLDIMTEKIKN 75
>pdb|2G2B|A Chain A, Nmr Structure Of The Human Allograft Inflammatory Factor 1
Length = 150
Score = 32.0 bits (71), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 7/65 (10%)
Query: 10 IDEFRECFFLFARNGTIKTLDELSV--IMRSLGMSPTIAELKKYLAE----KGGKLSFPD 63
++ F+E + F NG +D +S+ ++ LG+ T ELKK + E G S+PD
Sbjct: 50 LEGFKEKYMEFDLNGN-GDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPD 108
Query: 64 FLKVM 68
FL++M
Sbjct: 109 FLRMM 113
>pdb|2D58|A Chain A, Human Microglia-Specific Protein Iba1
Length = 107
Score = 32.0 bits (71), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 7/65 (10%)
Query: 10 IDEFRECFFLFARNGTIKTLDELSV--IMRSLGMSPTIAELKKYLAE----KGGKLSFPD 63
++ F+E + F NG +D +S+ ++ LG+ T ELKK + E G S+PD
Sbjct: 31 LEGFKEKYMEFDLNGN-GDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPD 89
Query: 64 FLKVM 68
FL++M
Sbjct: 90 FLRMM 94
>pdb|2K7B|A Chain A, Nmr Structure Of Mg2+-Bound Cabp1 N-Domain
Length = 76
Score = 32.0 bits (71), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 14/62 (22%), Positives = 34/62 (54%)
Query: 79 KEVVDAFKAADTTKSGTVPAKYLKHVLVNWGEGLSSKEVDQIFREANVTMNSKVRYEDFV 138
+E+ +AF+ D K G + + L + + G + E+ ++ ++ N+ + V ++DFV
Sbjct: 10 EELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDDFV 69
Query: 139 KI 140
++
Sbjct: 70 EL 71
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 31.2 bits (69), Expect = 0.20, Method: Composition-based stats.
Identities = 21/70 (30%), Positives = 32/70 (45%), Gaps = 8/70 (11%)
Query: 79 KEVVDAFKAADTTKSGTVPAKYL---KHVLVNWGEGLSS-----KEVDQIFREANVTMNS 130
KE+ D FK D G + K L +VL N+ L +EVD I +E + N
Sbjct: 355 KELTDIFKKLDKNGDGQLDKKELIEGYNVLRNFKNELGELKNVEEEVDNILKEVDFDKNG 414
Query: 131 KVRYEDFVKI 140
+ Y +F+ +
Sbjct: 415 YIEYSEFISV 424
>pdb|3KVE|A Chain A, Structure Of Native L-Amino Acid Oxidase From Vipera
Ammodytes Ammodytes: Stabilization Of The Quaternary
Structure By Divalent Ions And Structural Changes In
The Dynamic Active Site
pdb|3KVE|B Chain B, Structure Of Native L-Amino Acid Oxidase From Vipera
Ammodytes Ammodytes: Stabilization Of The Quaternary
Structure By Divalent Ions And Structural Changes In
The Dynamic Active Site
pdb|3KVE|C Chain C, Structure Of Native L-Amino Acid Oxidase From Vipera
Ammodytes Ammodytes: Stabilization Of The Quaternary
Structure By Divalent Ions And Structural Changes In
The Dynamic Active Site
pdb|3KVE|D Chain D, Structure Of Native L-Amino Acid Oxidase From Vipera
Ammodytes Ammodytes: Stabilization Of The Quaternary
Structure By Divalent Ions And Structural Changes In
The Dynamic Active Site
Length = 486
Score = 28.9 bits (63), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 21/38 (55%), Gaps = 4/38 (10%)
Query: 5 FREQDIDEFRECFFLFARNGTIKTLDELSVIMRSLGMS 42
FRE D +EF E ARNG KT + V++ GMS
Sbjct: 11 FRETDYEEFLE----IARNGLKKTSNPKHVVVVGAGMS 44
>pdb|2AAO|A Chain A, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
pdb|2AAO|B Chain B, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
Length = 166
Score = 28.9 bits (63), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 35/72 (48%), Gaps = 6/72 (8%)
Query: 32 LSVIMRSLGMSPTIAELKKYL----AEKGGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKA 87
L VI SL IA LK+ A+K G+++F + LK A E++D +A
Sbjct: 14 LRVIAESLS-EEEIAGLKEXFNXIDADKSGQITFEE-LKAGLKRVGANLKESEILDLXQA 71
Query: 88 ADTTKSGTVPAK 99
AD SGT+ K
Sbjct: 72 ADVDNSGTIDYK 83
>pdb|1MW7|A Chain A, X-Ray Structure Of Y162_helpy Northeast Structural
Genomics Consortium Target Pr6
Length = 240
Score = 27.3 bits (59), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 11/82 (13%)
Query: 18 FLFARNGTIKTLDELSVIMRSLGMSPTIAELKKYLAEKGGKLSFPDF---LKVMHTHSKA 74
F + R K D++S + L + T+A A+ GG S PD L+ ++KA
Sbjct: 5 FEYRRAAKEKRWDKMSKVFPKLAKAITLA------AKDGG--SEPDTNAKLRTAILNAKA 56
Query: 75 EDIPKEVVDAFKAADTTKSGTV 96
+++PK+ +DA ++K G +
Sbjct: 57 QNMPKDNIDAAIKRASSKEGNL 78
>pdb|3O4Y|A Chain A, Crystal Structure Of Cad Domain Of The Plasmodium Vivax
Cdpk, Pvx_11610
Length = 196
Score = 26.9 bits (58), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 19/90 (21%), Positives = 40/90 (44%), Gaps = 7/90 (7%)
Query: 53 AEKGGKLSFPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLKHVLVNWGE-- 110
++ G + + +FL + K + AF+ D G + L HVL N +
Sbjct: 101 SDGSGNIDYTEFLAAAIDRRQLS--KKLIYCAFRVFDVDNDGEITTAELAHVLFNGNKRG 158
Query: 111 GLSSKEVDQI---FREANVTMNSKVRYEDF 137
++ ++V+Q+ RE + + K+ + +F
Sbjct: 159 NITERDVNQVKKMIREVDKNGDGKIDFYEF 188
>pdb|2HPK|A Chain A, Crystal Structure Of Photoprotein Berovin From Beroe
Abyssicola
Length = 208
Score = 26.9 bits (58), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Query: 68 MHTHSKAEDIPKEVVDAF-KAADTTKSGTVPAKYLKHVL 105
+ T KA D+P+E F + ADT KSG + L H+
Sbjct: 150 LKTXXKAFDVPQEAAYTFFEKADTDKSGKLERTELVHLF 188
>pdb|1LUR|A Chain A, Crystal Structure Of The GalmALDOSE EPIMERASE HOMOLOGUE
From C. Elegans, Northeast Structural Genomics Target
Wr66
pdb|1LUR|B Chain B, Crystal Structure Of The GalmALDOSE EPIMERASE HOMOLOGUE
From C. Elegans, Northeast Structural Genomics Target
Wr66
Length = 339
Score = 26.2 bits (56), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 19/38 (50%)
Query: 1 MAHHFREQDIDEFRECFFLFARNGTIKTLDELSVIMRS 38
+A HF E + DEF E F G I+++ + RS
Sbjct: 183 VAEHFLEXEADEFVEVDDTFCPTGAIRSVTDTGFDFRS 220
>pdb|3NQP|A Chain A, Crystal Structure Of A Susd Superfamily Protein (Bf1802)
From Bacteroides Fragilis Nctc 9343 At 1.90 A Resolution
pdb|3NQP|B Chain B, Crystal Structure Of A Susd Superfamily Protein (Bf1802)
From Bacteroides Fragilis Nctc 9343 At 1.90 A Resolution
Length = 514
Score = 26.2 bits (56), Expect = 7.9, Method: Composition-based stats.
Identities = 15/42 (35%), Positives = 20/42 (47%)
Query: 61 FPDFLKVMHTHSKAEDIPKEVVDAFKAADTTKSGTVPAKYLK 102
F D L + +T ++ + K V F ADT K T A Y K
Sbjct: 303 FGDALDIQNTGNQTYEYNKAVYQNFDDADTRKEATFIASYNK 344
>pdb|1Z56|C Chain C, Co-Crystal Structure Of Lif1p-Lig4p
Length = 264
Score = 26.2 bits (56), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 17/27 (62%)
Query: 40 GMSPTIAELKKYLAEKGGKLSFPDFLK 66
G+ T AEL+K + E GGKL + LK
Sbjct: 23 GIRITRAELEKTIVEHGGKLIYNVILK 49
>pdb|4F9I|A Chain A, Crystal Structure Of Proline Utilization A (Puta) From
Geobacter Sulfurreducens Pca
pdb|4F9I|B Chain B, Crystal Structure Of Proline Utilization A (Puta) From
Geobacter Sulfurreducens Pca
Length = 1026
Score = 26.2 bits (56), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Query: 19 LFARNGTIKTLDELSVIMRSLGMSPTIAELKKYLAEKGGK 58
L A G+++T L +I R+ + P A +KK ++E GGK
Sbjct: 748 LIAFTGSMET--GLRIIERAAKVHPGQANVKKIISEMGGK 785
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.135 0.395
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,530,238
Number of Sequences: 62578
Number of extensions: 173821
Number of successful extensions: 884
Number of sequences better than 100.0: 196
Number of HSP's better than 100.0 without gapping: 158
Number of HSP's successfully gapped in prelim test: 38
Number of HSP's that attempted gapping in prelim test: 465
Number of HSP's gapped (non-prelim): 273
length of query: 149
length of database: 14,973,337
effective HSP length: 90
effective length of query: 59
effective length of database: 9,341,317
effective search space: 551137703
effective search space used: 551137703
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 47 (22.7 bits)