RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy12594
(542 letters)
>d1xm9a1 a.118.1.24 (A:244-700) Plakophilin 1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 457
Score = 70.6 bits (171), Expect = 1e-13
Identities = 43/325 (13%), Positives = 98/325 (30%), Gaps = 29/325 (8%)
Query: 126 DLDSIISSLHDFDPDTRANAALALGGLAKDNKHFAERIVQCGALPPLVQILASPQLSLKH 185
+ + L D +A A + ++ +++ Q G + LV +L SP +++
Sbjct: 3 TIPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQ 62
Query: 186 AAAFALDGIVKHSPELAESASDCDVIPLLIKALNN-DEVNVKADAFLCLADIAKDSPSLA 244
AAA AL +V S + I + L ++ L +++
Sbjct: 63 AAAGALRNLVFRSTTNKLETRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDELKE 122
Query: 245 STIADGATTLAVEHLTYPHGL---------------VQKNAATLLRDMCKHNLRLANLVV 289
IAD LA + G V NA LR++ + +
Sbjct: 123 ELIADALPVLADRVIIPFSGWCDGNSNMSREVVDPEVFFNATGCLRNLSSADAGRQTMRN 182
Query: 290 LAGGLDGLLRLIDC---NGGYNSLPAIMALGYMSAQSEQIAEQIIELQGVGSLQTILQCP 346
+G +D L+ + + + + S ++ ++
Sbjct: 183 YSGLIDSLMAYVQNCVAASRCDDKSVENCMCVLHNLSYRLDAEVPTRYRQLEYNARNAYT 242
Query: 347 H----------KEQLQVAAAWTLGQIGKHSVDNVTALCEENVLSTLLSKITQTCVSDNLK 396
+++ + + L + + T L+ + ++ L+
Sbjct: 243 EKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKGSGWLYHSDAIRTYLNLMGKSKKDATLE 302
Query: 397 SKCKNALNILIPKCENPKELEQMLL 421
+ N+ K + Q++
Sbjct: 303 ACAGALQNLTASKGLMSSGMSQLIG 327
Score = 48.7 bits (114), Expect = 1e-06
Identities = 43/421 (10%), Positives = 107/421 (25%), Gaps = 47/421 (11%)
Query: 89 VLKDLTKQNKHYKKTALHMLTCVAQQDERCAGLI-EDKDLDSIISSLHDFDPDTRANAAL 147
++ L+ Q++ Y+ + + QDE + + + ++ L + + + AA
Sbjct: 7 AVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAG 66
Query: 148 ALGGLAKDNKHFAERIVQCGALPPLVQILASPQLSLKHAAAFALDGIVKHSPELAESASD 207
AL L + + + V +L + L + + EL E
Sbjct: 67 ALRNLVFRSTTNKLETRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDELKEELIA 126
Query: 208 CDVIPLLI---------------KALNNDEVNVKADAFLCLADIAKDSPSLASTIA---- 248
+ L + + V +A CL +++ +
Sbjct: 127 DALPVLADRVIIPFSGWCDGNSNMSREVVDPEVFFNATGCLRNLSSADAGRQTMRNYSGL 186
Query: 249 --------DGATTLAVEHLTYPHGLVQKNAATLLRDMCKHNLRLANLVVLAGGLDGLLRL 300
+ + R + R L A
Sbjct: 187 IDSLMAYVQNCVAASRCDDKSVENCMCVLHNLSYRLDAEVPTRYRQLEYNARNAYTEKSS 246
Query: 301 IDCNGGYNSL---PAIMALGYMSAQSEQIAEQIIELQGVGSLQTILQCPHKEQLQVAAAW 357
C + + + + + + + ++ K+ A A
Sbjct: 247 TGCFSNKSDKMMNNNYDCPLPEEETNPKGSGWLYHSDAIRTYLNLMGKSKKDATLEACAG 306
Query: 358 TLGQIGKHSVDNVTALCEENVLSTLLSKITQTCVSDNLKSKCKNALNILIPKCENPKELE 417
L + + + + L + ++ ++L +P
Sbjct: 307 ALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHPLLHR 366
Query: 418 QMLLGNV----------------SEELLASILCAFAKILPCDPVARRSFVTSHCLRKVQE 461
M SE++L+S ++ P + + +S L +
Sbjct: 367 VMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIIN 426
Query: 462 I 462
+
Sbjct: 427 L 427
Score = 47.9 bits (112), Expect = 2e-06
Identities = 20/181 (11%), Positives = 46/181 (25%), Gaps = 11/181 (6%)
Query: 22 QTMSAFADKPSTIHFLKDLNVVDLIVPLLA----DKVPSIQHAALATLGKLMCAKHVDIR 77
+ P +L + + + L+ D AL L +
Sbjct: 264 CPLPEEETNPKGSGWLYHSDAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMS 323
Query: 78 QEVLERNLVALVLKDLTKQNKHYKKTALHMLTCVAQQDERCAGLIEDKDLDSIISSLHDF 137
Q + + + L + + L + ++ ++ + L
Sbjct: 324 QLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMSRHPLLHRVMGNQVFPEVTRLLTSH 383
Query: 138 DP------DTRANAALALGGLAKDNKHFAERIVQCGALPPLVQILASPQ-LSLKHAAAFA 190
D ++A + L A++ L ++ + S AA
Sbjct: 384 TGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAARLL 443
Query: 191 L 191
L
Sbjct: 444 L 444
>d1wa5b_ a.118.1.1 (B:) Karyopherin alpha {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 503
Score = 70.5 bits (171), Expect = 2e-13
Identities = 54/319 (16%), Positives = 118/319 (36%), Gaps = 14/319 (4%)
Query: 135 HDFDPDTRANAALALGGLAKDNKHFAERIVQCGALPPLVQILASPQLSLKHAAAFALDGI 194
+ + AA AL +A + +V A+P +Q+L + + +K A +AL +
Sbjct: 130 ENQPEMLQLEAAWALTNIASGTSAQTKVVVDADAVPLFIQLLYTGSVEVKEQAIWALGNV 189
Query: 195 VKHSPELAESASDCDVIPLLIKALNNDEVNVKADAFLCLADIAKDS-PSLASTIADGATT 253
S + + C+ + ++ N+++ ++ A L+++ + P ++ A
Sbjct: 190 AGDSTDYRDYVLQCNAMEPILGLFNSNKPSLIRTATWTLSNLCRGKKPQPDWSVVSQALP 249
Query: 254 LAVEHLTYPHGLVQKNAATLLRDMCKHNLRLANLVVLAGGLDGLLRLIDCNGGYNSLPAI 313
+ + +A + + V+ L+ L+ PA+
Sbjct: 250 TLAKLIYSMDTETLVDACWAISYLSDGPQEAIQAVIDVRIPKRLVELLSHESTLVQTPAL 309
Query: 314 MALGYMSAQSEQIAEQIIELQGVGSLQTILQCPHKEQLQVAAAWTLGQIGKHSVDNVTAL 373
A+G + ++ + +I + +L+ +L P KE ++ A WT+ I + + + A+
Sbjct: 310 RAVGNIVTGNDLQTQVVINAGVLPALRLLLSSP-KENIKKEACWTISNITAGNTEQIQAV 368
Query: 374 CEENVLSTLLSKITQTCVSDNLKSKCKNALNILIPKCENPKELEQM-----------LLG 422
+ N L L K+ + K C N + P + + LL
Sbjct: 369 IDAN-LIPPLVKLLEVAEYKTKKEACWAISNASSGGLQRPDIIRYLVSQGCIKPLCDLLE 427
Query: 423 NVSEELLASILCAFAKILP 441
++ L A IL
Sbjct: 428 IADNRIIEVTLDALENILK 446
Score = 63.2 bits (152), Expect = 3e-11
Identities = 44/205 (21%), Positives = 87/205 (42%), Gaps = 3/205 (1%)
Query: 125 KDLDSIISSLHDFDPDTRANAALALGG-LAKDNKHFAERIVQCGALPPLVQILASPQLS- 182
++L + L+ D + +A + L+++++ + ++Q G +P LV+ + Q
Sbjct: 76 QELPQMTQQLNSDDMQEQLSATVKFRQILSREHRPPIDVVIQAGVVPRLVEFMRENQPEM 135
Query: 183 LKHAAAFALDGIVKHSPELAESASDCDVIPLLIKALNNDEVNVKADAFLCLADIAKDSPS 242
L+ AA+AL I + + D D +PL I+ L V VK A L ++A DS
Sbjct: 136 LQLEAAWALTNIASGTSAQTKVVVDADAVPLFIQLLYTGSVEVKEQAIWALGNVAGDSTD 195
Query: 243 LASTIADGATTLAVEHLTYPHGL-VQKNAATLLRDMCKHNLRLANLVVLAGGLDGLLRLI 301
+ + L + + + A L ++C+ + V++ L L +LI
Sbjct: 196 YRDYVLQCNAMEPILGLFNSNKPSLIRTATWTLSNLCRGKKPQPDWSVVSQALPTLAKLI 255
Query: 302 DCNGGYNSLPAIMALGYMSAQSEQI 326
+ A A+ Y+S ++
Sbjct: 256 YSMDTETLVDACWAISYLSDGPQEA 280
Score = 37.8 bits (86), Expect = 0.003
Identities = 21/207 (10%), Positives = 54/207 (26%), Gaps = 17/207 (8%)
Query: 320 SAQSEQIAEQIIELQGVGSLQTILQCPHKEQLQVAAAWTLGQIGKHSVDNVTALCEENVL 379
S + + +I+ V L ++ E LQ+ AAW L I + + + + +
Sbjct: 105 SREHRPPIDVVIQAGVVPRLVEFMRENQPEMLQLEAAWALTNIASGTSAQTKVVVDADAV 164
Query: 380 STLLSKITQTCVSDNLKSKCKNALNILIPKCENPKELEQ------------MLLGNVSEE 427
+ + + A+ L + + L +
Sbjct: 165 -----PLFIQLLYTGSVEVKEQAIWALGNVAGDSTDYRDYVLQCNAMEPILGLFNSNKPS 219
Query: 428 LLASILCAFAKILPCDPVARRSFVTSHCLRKVQEIEPTPEIAPHLKTINACFPNEVIHFV 487
L+ + + + V S L + ++ + + + A
Sbjct: 220 LIRTATWTLSNLCRGKKPQPDWSVVSQALPTLAKLIYSMDTETLVDACWAISYLSDGPQE 279
Query: 488 SPHYLEDLINRLDQFNPQKSSNLPDCK 514
+ + D+ +
Sbjct: 280 AIQAVIDVRIPKRLVELLSHESTLVQT 306
>d1jdha_ a.118.1.1 (A:) beta-Catenin {Human (Homo sapiens) [TaxId:
9606]}
Length = 529
Score = 59.5 bits (142), Expect = 4e-10
Identities = 51/333 (15%), Positives = 115/333 (34%), Gaps = 8/333 (2%)
Query: 81 LERNLVALVLKDLTKQNKHYKKTALHMLTCVAQQDERCAGLIEDKD-LDSIISSL-HDFD 138
L + + K L +++ A M+ +++++ ++ + +I+ ++ + D
Sbjct: 14 LATRAIPELTKLLNDEDQVVVNKAAVMVHQLSKKEASRHAIMRSPQMVSAIVRTMQNTND 73
Query: 139 PDTRANAALALGGLAKDNKHFAERIVQCGALPPLVQILASPQLSLKHAAAFALDGIVKHS 198
+T A L L+ + I + G +P LV++L SP S+ A L ++ H
Sbjct: 74 VETARCTAGTLHNLSHHREG-LLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQ 132
Query: 199 PELAESASDCDVIPLLIKALNNDEVNVKADAFLCLADIAKDSPSLAS-TIADGATTLAVE 257
+ + ++ LN V A CL +A + +A G V
Sbjct: 133 EGAKMAVRLAGGLQKMVALLNKTNVKFLAITTDCLQILAYGNQESKLIILASGGPQALVN 192
Query: 258 HLTYPHGLVQKNAATLLRDMCKHNLRLANLVVLAGGLDGLLRLIDCNGGYNSLPAIMALG 317
+ + + + +V AGG+ L + + L
Sbjct: 193 IMRTYTYEKLLWTTSRVLKVLSVCSSNKPAIVEAGGMQALGLHLTDPSQRLVQNCLWTLR 252
Query: 318 YMSAQSEQIAEQIIELQGVGSLQTILQCPHKEQLQVAAAWTLGQIGKHSVDNVTALCEEN 377
+S + + ++G+ L + AA L + ++ N +C+
Sbjct: 253 NLSDAA----TKQEGMEGLLGTLVQLLGSDDINVVTCAAGILSNLTCNNYKNKMMVCQVG 308
Query: 378 VLSTLLSKITQTCVSDNLKSKCKNALNILIPKC 410
+ L+ + + +++ AL L +
Sbjct: 309 GIEALVRTVLRAGDREDITEPAICALRHLTSRH 341
Score = 49.5 bits (116), Expect = 7e-07
Identities = 34/203 (16%), Positives = 64/203 (31%), Gaps = 21/203 (10%)
Query: 96 QNKHYKKTALHMLTCVAQQDERCAGLIEDKDLDSIISSLHDFDPDTRANAALALGGLAKD 155
+ H+ + + + + L ++ LH A + L
Sbjct: 326 ITEPAICALRHLTSRHQEAEMAQNAVRLHYGLPVVVKLLHPPSHWPLIKATVGLIRNLAL 385
Query: 156 NKHFAERIVQCGALPPLVQILASPQLSLKHAAAFALD---------------------GI 194
+ + GA+P LVQ+L + + I
Sbjct: 386 CPANHAPLREQGAIPRLVQLLVRAHQDTQRRTSMGGTQQQFVEGVRMEEIVEGCTGALHI 445
Query: 195 VKHSPELAESASDCDVIPLLIKALNNDEVNVKADAFLCLADIAKDSPSLASTIADGATTL 254
+ + IPL ++ L + N++ A L ++A+D + + A+GAT
Sbjct: 446 LARDVHNRIVIRGLNTIPLFVQLLYSPIENIQRVAAGVLCELAQDKEAAEAIEAEGATAP 505
Query: 255 AVEHLTYPHGLVQKNAATLLRDM 277
E L + V AA +L M
Sbjct: 506 LTELLHSRNEGVATYAAAVLFRM 528
Score = 36.8 bits (83), Expect = 0.006
Identities = 24/163 (14%), Positives = 49/163 (30%), Gaps = 20/163 (12%)
Query: 11 DHYQRARLCFVQTMSAFADKPSTIHFLKDLNVVDLIVPLLADKVPSIQHAALATLGKLM- 69
+ V + A P+ L++ + +V LL Q +
Sbjct: 367 PSHWPLIKATVGLIRNLALCPANHAPLREQGAIPRLVQLLVRAHQDTQRRTSMGGTQQQF 426
Query: 70 -------------------CAKHVDIRQEVLERNLVALVLKDLTKQNKHYKKTALHMLTC 110
A+ V R + N + L ++ L ++ ++ A +L
Sbjct: 427 VEGVRMEEIVEGCTGALHILARDVHNRIVIRGLNTIPLFVQLLYSPIENIQRVAAGVLCE 486
Query: 111 VAQQDERCAGLIEDKDLDSIISSLHDFDPDTRANAALALGGLA 153
+AQ E + + + LH + AA L ++
Sbjct: 487 LAQDKEAAEAIEAEGATAPLTELLHSRNEGVATYAAAVLFRMS 529
>d1q1sc_ a.118.1.1 (C:) Importin alpha {Mouse (Mus musculus) [TaxId:
10090]}
Length = 434
Score = 58.3 bits (139), Expect = 1e-09
Identities = 46/259 (17%), Positives = 101/259 (38%), Gaps = 9/259 (3%)
Query: 127 LDSIISSLHDFDPDTRANAALALGGLA-KDNKHFAERIVQCGALPPLVQILA-SPQLSLK 184
++ I+ ++ + +++ A A L ++ + + I++ G +P V L + ++
Sbjct: 15 VEDIVKGINSNNLESQLQATQAARKLLSREKQPPIDNIIRAGLIPKFVSFLGKTDCSPIQ 74
Query: 185 HAAAFALDGIVKHSPELAESASDCDVIPLLIKALNNDEVNVKADAFLCLADIAKDSPSLA 244
+A+AL I + E ++ D IP I L + ++ A L +IA D +
Sbjct: 75 FESAWALTNIASGTSEQTKAVVDGGAIPAFISLLASPHAHISEQAVWALGNIAGDGSAFR 134
Query: 245 STIAD------GATTLAVEHLTYPHGLVQKNAATLLRDMCKHNLRLANLVVLAGGLDGLL 298
+ LAV L+ +N L ++C++ L + L L+
Sbjct: 135 DLVIKHGAIDPLLALLAVPDLSTLACGYLRNLTWTLSNLCRNKNPAPPLDAVEQILPTLV 194
Query: 299 RLIDCNGGYNSLPAIMALGYMSAQSEQIAEQIIELQGVGSLQTILQCPHKEQLQVAAAWT 358
RL+ N + A+ Y++ + E +++ +GV L + + A
Sbjct: 195 RLLHHNDPEVLADSCWAISYLTDGPNERIEMVVK-KGVVPQLVKLLGATELPIVTPALRA 253
Query: 359 LGQIGKHSVDNVTALCEEN 377
+G I + + + +
Sbjct: 254 IGNIVTGTDEQTQKVIDAG 272
Score = 57.1 bits (136), Expect = 3e-09
Identities = 66/441 (14%), Positives = 137/441 (31%), Gaps = 63/441 (14%)
Query: 43 VDLIVPLLADKVPSIQHAALATLGKLMCAKHVDIRQEVLERNLVALVLKDLTKQNKHYKK 102
V+ IV + Q A KL+ + ++ L+ + L K +
Sbjct: 15 VEDIVKGINSNNLESQLQATQAARKLLSREKQPPIDNIIRAGLIPKFVSFLGKTD----- 69
Query: 103 TALHMLTCVAQQDERCAGLIEDKDLDSIISSLHDFDPDTRANAALALGGLAKDNKHFAER 162
+ +A AL +A +
Sbjct: 70 -----------------------------------CSPIQFESAWALTNIASGTSEQTKA 94
Query: 163 IVQCGALPPLVQILASPQLSLKHAAAFALDGIVKHSPELAESASDCDVIPLLIKALNNDE 222
+V GA+P + +LASP + A +AL I + I L+ L +
Sbjct: 95 VVDGGAIPAFISLLASPHAHISEQAVWALGNIAGDGSAFRDLVIKHGAIDPLLALLAVPD 154
Query: 223 VNVKADAFLCLADIAK------DSPSLASTIADGATTLAVEHLTYPHGLVQKNAATLLRD 276
++ A +L +P+ + V L + V ++ +
Sbjct: 155 LSTLACGYLRNLTWTLSNLCRNKNPAPPLDAVEQILPTLVRLLHHNDPEVLADSCWAISY 214
Query: 277 MCKHNLRLANLVVLAGGLDGLLRLIDCNGGYNSLPAIMALGYMSAQSEQIAEQIIELQGV 336
+ +VV G + L++L+ PA+ A+G + +++ +++I+ +
Sbjct: 215 LTDGPNERIEMVVKKGVVPQLVKLLGATELPIVTPALRAIGNIVTGTDEQTQKVIDAGAL 274
Query: 337 GSLQTILQCPHKEQLQVAAAWTLGQIGKHSVDNVTALCEENVLSTLLSKITQTCVSD--- 393
++L P +Q A WT+ I D + + ++ L+ +++
Sbjct: 275 AVFPSLLTNPKTN-IQKEATWTMSNITAGRQDQIQQVVNHGLVPFLVGVLSKADFKTQKE 333
Query: 394 ------NLKSKCKNALNILIPKCENPKELEQMLLGNVSEELLASILCAFAKIL------P 441
N S + + C + L LL +++ IL A + I
Sbjct: 334 AAWAITNYTSGGTVEQIVYLVHCGIIEPLMN-LLSAKDTKIIQVILDAISNIFQAAEKLG 392
Query: 442 CDPVARRSFVTSHCLRKVQEI 462
L K++ +
Sbjct: 393 ETEKLSIMIEECGGLDKIEAL 413
Score = 38.2 bits (87), Expect = 0.002
Identities = 24/188 (12%), Positives = 63/188 (33%), Gaps = 6/188 (3%)
Query: 286 NLVVLAGGLDGLLRLIDCNGGYNSLPAIMALGYM-SAQSEQIAEQIIELQGVGSLQTILQ 344
N + ++ +++ I+ N + L A A + S + + + II + + L
Sbjct: 7 NQGTVNWSVEDIVKGINSNNLESQLQATQAARKLLSREKQPPIDNIIRAGLIPKFVSFLG 66
Query: 345 CPHKEQLQVAAAWTLGQIGKHSVDNVTALCEENVLSTLLSKITQTCVSDNLKSKCKNALN 404
+Q +AW L I + + A+ + + + ++ + A+
Sbjct: 67 KTDCSPIQFESAWALTNIASGTSEQTKAVVDGGAIPAF-----ISLLASPHAHISEQAVW 121
Query: 405 ILIPKCENPKELEQMLLGNVSEELLASILCAFAKILPCDPVARRSFVTSHCLRKVQEIEP 464
L + +++ + + + L ++L R T L + + P
Sbjct: 122 ALGNIAGDGSAFRDLVIKHGAIDPLLALLAVPDLSTLACGYLRNLTWTLSNLCRNKNPAP 181
Query: 465 TPEIAPHL 472
+ +
Sbjct: 182 PLDAVEQI 189
>d1u6gc_ a.118.1.2 (C:) Cullin-associated NEDD8-dissociated protein
1 (Tip120) {Human (Homo sapiens) [TaxId: 9606]}
Length = 1207
Score = 57.8 bits (138), Expect = 2e-09
Identities = 55/409 (13%), Positives = 130/409 (31%), Gaps = 31/409 (7%)
Query: 41 NVVDLIVPLLADKVPSIQHAALATLGKLMCAKHVDIRQEVLERNLVALVLKDLTKQNKHY 100
VV +I+ LL DK +Q+ A+ LG L+ +++ +E +V + ++ +
Sbjct: 45 KVVKMILKLLEDKNGEVQNLAVKCLGPLV----SKVKEYQVE-TIVDTLCTNMLSDKEQL 99
Query: 101 KKTALHMLTCVAQQ--DERCAGLIEDKDLDSIISSLHDF-----DPDTRANAALALGGLA 153
+ + L V + + I L D + A + +
Sbjct: 100 RDISSIGLKTVIGELPPASSGSALAANVCKKITGRLTSAIAKQEDVSVQLEALDIMADML 159
Query: 154 KDNKHFAERIVQCGALPPLVQILASPQLSLKHAAAFALDGIVKHSPELAESASDCDVIPL 213
L L+ L SP+L+++ AL +V + D+I
Sbjct: 160 SRQGGLLVNFHPS-ILTCLLPQLTSPRLAVRKRTIIALGHLVMSCGNIVFV----DLIEH 214
Query: 214 LIKAL-NNDEVNVKADAFLCLADIAKDSPSLASTIADGATTLAVEHLTYPHGLVQKNAAT 272
L+ L ND ++ C+A I++ + + L V+ +++
Sbjct: 215 LLSELSKNDSMSTTRTYIQCIAAISRQAGHRIGEYLEKIIPLVVKFCNVDDDELREYCIQ 274
Query: 273 LLRDMCKHNLRLANLVVLAGGLDGLLRLIDCNGGYNSLPAIMALGYMSAQSEQIAEQIIE 332
+ ++ ++ L+ + + YN M A +Q +
Sbjct: 275 AFESFVRR-CPKEVYPHVSTIINICLKYLTYDPNYNYDDEDEDENAMDADGGDDDDQGSD 333
Query: 333 LQGVGSLQTILQCPHKEQLQVAAAWTLGQIGKHSVDNVTALCEENVLSTLLSKITQTCVS 392
+ +++ AAA L + + + + +S +
Sbjct: 334 ------DEYSDDDDMSWKVRRAAAKCLDAVVSTRHEMLPEFYKT------VSPALISRFK 381
Query: 393 DNLKSKCKNALNILIPKCENPKELEQMLLGNVSEELLASILCAFAKILP 441
+ ++ + + + + + ++ L + E + L +P
Sbjct: 382 EREENVKADVFHAYLSLLKQTRPVQSWLCDPDAMEQGETPLTMLQSQVP 430
Score = 42.8 bits (99), Expect = 1e-04
Identities = 36/314 (11%), Positives = 91/314 (28%), Gaps = 24/314 (7%)
Query: 127 LDSIISSLHDFDPDTRANAALALGGLAKDNKHFAERIVQCGALPPLVQILASPQLSLKHA 186
+ +++ + D D R A L + + + + + ++++L +++
Sbjct: 5 ISNLLEKMTSSDKDFRFMATNDLMTELQKDSIKLDDDSERKVVKMILKLLEDKNGEVQNL 64
Query: 187 AAFALDGIVKHSPELAESASDCDVIPLLIKALNNDEVNVKADAFLCLADIAKDSPSL--- 243
A L +V E ++ L + +D+ ++ + + L + + P
Sbjct: 65 AVKCLGPLVSKVKEYQVET----IVDTLCTNMLSDKEQLRDISSIGLKTVIGELPPASSG 120
Query: 244 ----ASTIADGATTLAVEHLTYPHGLVQKNAATLLRDMCKHNLRLANLVVLAGGLDGLLR 299
A+ L VQ A ++ DM L L LL
Sbjct: 121 SALAANVCKKITGRLTSAIAKQEDVSVQLEALDIMADMLSRQGGLLV-NFHPSILTCLLP 179
Query: 300 LIDCNGGYNSLPAIMALGY-MSAQSEQIAEQIIELQGVGSLQTILQCPHKEQLQVAAAWT 358
+ I+ALG+ + + + +IE L + L
Sbjct: 180 QLTSPRLAVRKRTIIALGHLVMSCGNIVFVDLIE-----HLLSELSKNDSMSTTRTYIQC 234
Query: 359 LGQIGKHSVDNVTALCEENVLSTLLSKITQTCVSDNLKSKCKNALNILIPKCENPKELEQ 418
+ I + + + E+ + + + + + + +
Sbjct: 235 IAAISRQAGHRIGEYLEK------IIPLVVKFCNVDDDELREYCIQAFESFVRRCPKEVY 288
Query: 419 MLLGNVSEELLASI 432
+ + L +
Sbjct: 289 PHVSTIINICLKYL 302
Score = 40.5 bits (93), Expect = 6e-04
Identities = 29/207 (14%), Positives = 66/207 (31%), Gaps = 28/207 (13%)
Query: 21 VQTMSAFADKPSTIHFLKDLNVVDLIVPLLADKVPSIQHAALATLGKL--MCAKHV---- 74
+ + + + I L + +I+ + ++ AA LG +
Sbjct: 833 LLALLSLGEVGHHIDLSGQLELKSVILEAFSSPSEEVKSAASYALGSISVGNLPEYLPFV 892
Query: 75 -------DIRQEVLERNLVALVLKDLTKQNKHYKKTALHMLTCVAQQDE--------RCA 119
RQ +L +L ++ K Y + +L + E C
Sbjct: 893 LQEITSQPKRQYLLLHSLKEIISSASVVGLKPYVENIWALLLKHCECAEEGTRNVVAECL 952
Query: 120 GLIEDKDLDSIISSLHDF----DPDTRANAALALGGLAKD-NKHFAERIVQCGALPPLVQ 174
G + D ++++ L + R++ A+ D + + C + ++
Sbjct: 953 GKLTLIDPETLLPRLKGYLISGSSYARSSVVTAVKFTISDHPQPIDPLLKNC--IGDFLK 1010
Query: 175 ILASPQLSLKHAAAFALDGIVKHSPEL 201
L P L+++ A + + P L
Sbjct: 1011 TLEDPDLNVRRVALVTFNSAAHNKPSL 1037
Score = 27.8 bits (60), Expect = 4.2
Identities = 61/407 (14%), Positives = 129/407 (31%), Gaps = 18/407 (4%)
Query: 19 CFVQTMSAFADKPSTIHFLKDLNVVDLIVPLLADKVPSIQHAALATLGKLMCAKHVDIRQ 78
V ++KDL + AD ++ A++ +G+++C ++
Sbjct: 544 VKVIRPLDQPSSFDATPYIKDLFTCTIKRLKAADIDQEVKERAISCMGQIICNLGDNLGS 603
Query: 79 EVLERNLVALVLKDLTKQNKHYKKTALHMLTCVAQQDER-CAGLIEDKDLDSIISSLHDF 137
++ L + +N+ + T + LT +A + + + + + S L
Sbjct: 604 DLPNT----LQIFLERLKNEITRLTTVKALTLIAGSPLKIDLRPVLGEGVPILASFLRKN 659
Query: 138 DPDTRANAALALGGLAKDNKHFAERIVQCGALPPLVQILASPQLSLKHAAAFALDGIVKH 197
+ AL L K+ + L L +++ + + A L + K
Sbjct: 660 QRALKLGTLSALDILIKNYSDSLTAAMIDAVLDELPPLISESDMHVSQMAISFLTTLAKV 719
Query: 198 SPELAESASDCDVIPLLIKALNNDEVNVKADAFLCLADIAKDSPSLASTIADGATTLAVE 257
P S + L+ + A L + + D L
Sbjct: 720 YPSSLSKISGSILNELIGLVRSPLLQGGALSAMLDFFQALVVTGTNNLGYMDLLRMLTGP 779
Query: 258 HLTYPHGLVQKNAATLLRDMCKHNLRLANLVVLAGGLDGLLRLIDCNGGYNSLPAIMALG 317
+ L K + + C L A + ++ + + +S+ + L
Sbjct: 780 VYSQSTALTHKQSYYSIAK-CVAALTRACPKEGPAVVGQFIQDVKNSRSTDSIRLLALLS 838
Query: 318 YMSAQSEQIAEQIIELQGVGSLQTILQCPHKEQLQVAAAWTLGQIGKHSVDN----VTAL 373
+EL+ V + P E+++ AA++ LG I ++ V
Sbjct: 839 LGEVGHHIDLSGQLELKSV--ILEAFSSPS-EEVKSAASYALGSISVGNLPEYLPFVLQE 895
Query: 374 CEEN-----VLSTLLSKITQTCVSDNLKSKCKNALNILIPKCENPKE 415
+L L +I + LK +N +L+ CE +E
Sbjct: 896 ITSQPKRQYLLLHSLKEIISSASVVGLKPYVENIWALLLKHCECAEE 942
>d2vgla_ a.118.1.10 (A:) Adaptin alpha C subunit N-terminal fragment
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 584
Score = 57.1 bits (137), Expect = 3e-09
Identities = 62/451 (13%), Positives = 138/451 (30%), Gaps = 74/451 (16%)
Query: 3 RKSVKN--SIDHYQR----ARLCFVQTMSAFADKPSTIHFLKDLNVVDLIVPLLADKVPS 56
R K ++D Y + +L F+ + I F + V+L+ + +
Sbjct: 33 RSKFKGDKALDGYSKKKYVCKLLFIFLLGH------DIDFG-HMEAVNLL----SSNRYT 81
Query: 57 IQHAALATLGKLMCAKHVDIRQEVLERNLVALVLKDLTKQNKHYKKTALHMLTCVAQQD- 115
+ +G L + V+ E++ R + + DL +N + ALH + V ++
Sbjct: 82 EKQ-----IGYLFISVLVNSNSELI-RLINNAIKNDLASRNPTFMGLALHCIANVGSREM 135
Query: 116 -ERCAGLIEDKDLDSIISSLHDFDPDTRANAALALGGLAKDNKHFAERIVQCGALPPLVQ 174
E AG I D + +AAL L + + + + +V
Sbjct: 136 AEAFAGEIPKIL------VAGDTMDSVKQSAALC---LLRLYRTSPDLVPMGDWTSRVVH 186
Query: 175 ILASPQLSLKHAAAFALDGIVKHSPELAESASDCDVIPLLIKALNNDEVNVKADAFLCLA 234
+L L + AA + + + +PE ++ + L + L+ + D
Sbjct: 187 LLNDQHLGVVTAATSLITTLAQKNPEEFKT-----SVSLAVSRLSRIVTSASTDLQDYTY 241
Query: 235 DIAKDSPSLASTIADGATTLAVEHLTYPHGLVQKNAATLLRDMCKHNLRLANLVVLAGGL 294
+ L + V+ L + +
Sbjct: 242 YFVPAPWLSVKLL-----RLLQCYPPPEDPAVRGRLTECLETILNKAQEPPKSKKVQ--- 293
Query: 295 DGLLRLIDCNGGYNSLPAIMALGYMSAQSEQIAEQIIELQGVGSLQTILQCPHKEQLQVA 354
N+ A++ +S +E + ++ L LQ L+
Sbjct: 294 -----------HSNAKNAVL-FEAISLIIHHDSEPNLLVRACNQLGQFLQHRETN-LRYL 340
Query: 355 AAWTLGQIGKHSVDNVTALCEENVLSTLLSKITQTCVSDNLKSKCKNALNILIPKCENPK 414
A ++ + + T + + ++ S + A+++L C +
Sbjct: 341 ALESMCTLASSEFS-------HEAVKTHIETVINALKTERDVSVRQRAVDLLYAMC-DRS 392
Query: 415 ELEQML------LGNVSEELLASILCAFAKI 439
+Q++ L + I+ A +
Sbjct: 393 NAQQIVAEMLSYLETADYSIREEIVLKVAIL 423
Score = 43.6 bits (102), Expect = 4e-05
Identities = 45/344 (13%), Positives = 108/344 (31%), Gaps = 35/344 (10%)
Query: 37 LKDLNVVDLIVPLLADKVPSIQHAALATLGKLMCAKHVDIRQEVLERNLVALVLKDLTKQ 96
+ + +V LL D+ + AA + + L K+ + + + + L +
Sbjct: 175 VPMGDWTSRVVHLLNDQHLGVVTAATSLITTL-AQKNPEEFKTSVSLAVSRLSRIVTSAS 233
Query: 97 NKHYKKTA------------LHMLTCVAQQDERCAGLIEDKDLDSIISSLHDFDPDTR-- 142
T L +L C ++ + L++I++ + +
Sbjct: 234 TDLQDYTYYFVPAPWLSVKLLRLLQCYPPPEDPAVRGRLTECLETILNKAQEPPKSKKVQ 293
Query: 143 ---ANAALALGGLAKDNKHFAERIVQCGALPPLVQILASPQLSLKHAAAFALDGIVKHSP 199
A A+ ++ H +E + A L Q L + +L++ A ++ +
Sbjct: 294 HSNAKNAVLFEAISLIIHHDSEPNLLVRACNQLGQFLQHRETNLRYLALESMCTLASSEF 353
Query: 200 ELAESASDCDVIPLLIKALNNDEVNVKADAFLCLADIAKDSPSLASTIADGATTLAVEHL 259
+ + + + +V+V+ A L + S + + +L
Sbjct: 354 SHEAVKTHIETV--INALKTERDVSVRQRAVDLLYAMCDRS-----NAQQIVAEM-LSYL 405
Query: 260 TYPHGLVQKNAATLLRDMCKHNLRLANLVVLAGGLDGLLRLIDCNGGYNSLPAIMALGYM 319
+++ + + + A V +D +L LI G Y S + +
Sbjct: 406 ETADYSIREEIVLKVAILA---EKYA--VDYTWYVDTILNLIRIAGDYVSEEVWYRVIQI 460
Query: 320 SAQSEQIAEQIIELQGVGSLQTILQCPHKEQLQVAAAWTLGQIG 363
+ + + + + E L + LG+ G
Sbjct: 461 VINRDDVQGYAAKT----VFEALQAPACHENLVKVGGYILGEFG 500
>d2vglb_ a.118.1.10 (B:) Adaptin beta subunit N-terminal fragment
{Human (Homo sapiens) [TaxId: 9606]}
Length = 579
Score = 56.7 bits (136), Expect = 4e-09
Identities = 60/421 (14%), Positives = 139/421 (33%), Gaps = 37/421 (8%)
Query: 42 VVDLIVPLLADKVPSIQHAALATLGKLMCAKHVDIRQEVLERNLVALVLKDLTKQNKHYK 101
V+ V D P I+ A+ T+G IR + + L + K L ++ + +
Sbjct: 84 AVNSFVKDCEDPNPLIRALAVRTMGC--------IRVDKITEYLCEPLRKCLKDEDPYVR 135
Query: 102 KTALHMLTCVAQQDERCAGLIEDKDLDSIISSLHDFDPDTRANAALALGGLAKDNKHFAE 161
KTA + + + + + + LDS+ + D +P ANA AL +++ + +
Sbjct: 136 KTAAVCVAKLHDINAQM--VEDQGFLDSLRDLIADSNPMVVANAVAALSEISESHPNSNL 193
Query: 162 RIVQCGALPPLVQILASPQLSLKHAAAFALDGIVKHSPELAESASDCDVIPLLIKALNND 221
+ + L+ L + L A+S C+ + + N+
Sbjct: 194 LDLNPQNINKLLTALNECTEWGQIFILDCLSNYNPKDDREAQSI--CERVTPRLSHANSA 251
Query: 222 EVNVKADAFLCLADIAKDSPSLASTIADGATTLAVEHLTYPH----------GLVQKNAA 271
V + ++ + + V L+ L+ +
Sbjct: 252 VVLSAVKVLMKFLELLPKDSDYYNMLLKKLAPPLVTLLSGEPEVQYVALRNINLIVQKRP 311
Query: 272 TLLRDMCKHNLRLAN--LVVLAGGLDGLLRLIDCNGGYNSLPAIMALGYMSAQSEQIAEQ 329
+L+ K N + V LD ++RL L + Y + +
Sbjct: 312 EILKQEIKVFFVKYNDPIYVKLEKLDIMIRLASQANIAQVLAELKE--YATEVDVDFVRK 369
Query: 330 IIELQGVGSLQTILQCPHKEQLQVAAAWTLG-QIGKHSVDNVTALCE------ENVLSTL 382
+ G +++ + T + + ++ + + E++++TL
Sbjct: 370 AVRAIGRCAIKVEQSAERCVSTLLDLIQTKVNYVVQEAIVVIRDIFRKYPNKYESIIATL 429
Query: 383 LSKITQTCVSDNLKSKCKNALNILIPKCENPKELEQMLLGNVSEE---LLASILCAFAKI 439
+ + + ++ + + +N EL + L +E + ++L A K+
Sbjct: 430 CENL-DSLDEPDARAAMIWIVGEYAERIDNADELLESFLEGFHDESTQVQLTLLTAIVKL 488
Query: 440 L 440
Sbjct: 489 F 489
Score = 51.3 bits (122), Expect = 2e-07
Identities = 57/361 (15%), Positives = 110/361 (30%), Gaps = 34/361 (9%)
Query: 168 ALPPLVQILASPQLSLKHAAAFALDGIVKHSPELAESASDCDVIPLLIKALNNDEVNVKA 227
P +V + + L LK L K P++A + +K + ++A
Sbjct: 47 LFPDVVNCMQTDNLELKKLVYLYLMNYAKSQPDMAI-----MAVNSFVKDCEDPNPLIRA 101
Query: 228 DAFLCLADIAKDSPSLASTIADGATTLAVEHLTYPHGLVQKNAATLLRDMCKHNLRLANL 287
A + I + + + + L V+K AA + + N A +
Sbjct: 102 LAVRTMGCIR--VDKITEYLCE----PLRKCLKDEDPYVRKTAAVCVAKLHDIN---AQM 152
Query: 288 VVLAGGLDGLLRLIDCNGGYNSLPAIMALGYMSAQSEQIAEQIIELQGVGSLQTILQCPH 347
V G LD L LI + A+ AL +S + Q + L T L
Sbjct: 153 VEDQGFLDSLRDLIADSNPMVVANAVAALSEISESHPNSNLLDLNPQNINKLLTALNECT 212
Query: 348 KEQLQVAAAWTLGQIGKHSVDNVTALCEE-------NVLSTLLSKITQTCVSDNLKSKCK 400
E Q+ L ++CE + +LS + L K
Sbjct: 213 -EWGQIFILDCLSNYNPKDDREAQSICERVTPRLSHANSAVVLSAVKVLMKFLELLPKDS 271
Query: 401 NALNILIPKCENPKELEQMLLGNVSEELLASILCAFAKILPCDPVARRSFVTSHCLR--- 457
+ N+L+ K P + L + E+ L I+ P + + ++
Sbjct: 272 DYYNMLLKKLAPP----LVTLLSGEPEVQYVALRNINLIVQKRPEILKQEIKVFFVKYND 327
Query: 458 KVQEIEPTPEIAPHLKTINACFP--NEVIHFV---SPHYLEDLINRLDQFNPQKSSNLPD 512
+ +I L + E+ + ++ + + + + +
Sbjct: 328 PIYVKLEKLDIMIRLASQANIAQVLAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAER 387
Query: 513 C 513
C
Sbjct: 388 C 388
Score = 35.9 bits (82), Expect = 0.013
Identities = 18/193 (9%), Positives = 64/193 (33%), Gaps = 22/193 (11%)
Query: 50 LADKVPSIQHAALATLGKLMCAKHVDIRQEVLERNLVALVLKDLTKQNKHYKKTALHMLT 109
+ ++ L + +L ++ ++A + + T+ + + + A+ +
Sbjct: 324 KYNDPIYVKLEKLDIMIRLASQANIA--------QVLAELKEYATEVDVDFVRKAVRAIG 375
Query: 110 CVAQQDERCAGLIEDKDLDSIISSLHDFDPDTRANAALALGGLAKDNKHFAERIVQCGAL 169
A + E+ A + +++ + A + + + + + E I+ L
Sbjct: 376 RCAIKVEQSAERC----VSTLLDLIQTKVNYVVQEAIVVIRDIFRKYPNKYESIIAT--L 429
Query: 170 PPLVQILASPQLSLKHAAAFALDGIVKHSPELAESASDCDVIPLLIKALNNDEVNVKADA 229
+ L P + A + + + +++ ++ +++ V+
Sbjct: 430 CENLDSLDEPDA--RAAMIWIVGEYAERIDNAD------ELLESFLEGFHDESTQVQLTL 481
Query: 230 FLCLADIAKDSPS 242
+ + PS
Sbjct: 482 LTAIVKLFLKKPS 494
>d1qbkb_ a.118.1.1 (B:) Karyopherin beta2 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 888
Score = 57.0 bits (136), Expect = 4e-09
Identities = 38/293 (12%), Positives = 89/293 (30%), Gaps = 23/293 (7%)
Query: 11 DHYQRARLCFVQTMSAFADKPSTIHFLKDLNVVDLIVPLLADKVPSIQHAALATLGKLMC 70
D +R + + ++ T ++D +V + +G L
Sbjct: 489 DSNKRVQEAACSAFATLEEEACTELVPYLAYILDTLVFAFSKYQHKNLLILYDAIGTLAD 548
Query: 71 AKHVDIRQEVLERNLVALVLKDLTKQNKHYKK--TALHMLTCVAQ--------------- 113
+ + + + L+ +++ K L L+ VA
Sbjct: 549 SVGHHLNKPEYIQMLMPPLIQKWNMLKDEDKDLFPLLECLSSVATALQSGFLPYCEPVYQ 608
Query: 114 --QDERCAGLIEDKDLDSIISSLHDFDPDTRANAALALGGLAKD-NKHFAERIVQCGALP 170
+ L + ++ D D A L GLA+ + + + + L
Sbjct: 609 RCVNLVQKTLAQAMLNNAQPDQYEAPDKDFMIVALDLLSGLAEGLGGNIEQLVARSNILT 668
Query: 171 PLVQILASPQLSLKHAAAFALDGIVKHSPELAESASDCDVIPLLIKALNNDEVNVKADAF 230
+ Q + ++ ++ L + K + + D +P+L LN + ++V +A
Sbjct: 669 LMYQCMQDKMPEVRQSSFALLGDLTKACFQHVKPCIA-DFMPILGTNLNPEFISVCNNAT 727
Query: 231 LCLADIAKDSPSLASTIADGATTLAVEHLTYP--HGLVQKNAATLLRDMCKHN 281
+ +I+ VE + P + +N A + +
Sbjct: 728 WAIGEISIQMGIEMQPYIPMVLHQLVEIINRPNTPKTLLENTAITIGRLGYVC 780
Score = 46.2 bits (108), Expect = 1e-05
Identities = 27/155 (17%), Positives = 53/155 (34%), Gaps = 10/155 (6%)
Query: 89 VLKDLTKQNKHYKKTALHMLTCVAQQDERCAGLIEDKDLDSIISSLHDFDPDTRANAALA 148
+LK+ + ++T L + Q + LI +++ L D TR+ + L
Sbjct: 16 LLKESQSPDTTIQRTVQQKLEQLNQYPDFNNYLIF------VLTKLKSEDEPTRSLSGLI 69
Query: 149 LGGLAKDNKHFAERIVQCGALPPLVQILASPQLSLKHAAAFALDGIVKHSPELAESASDC 208
L K + V + + ++ + I
Sbjct: 70 LKNNVKAHFQNFPNGVTDFIKSECLNNIGDSSPLIRATVGILITTIASKGELQNWP---- 125
Query: 209 DVIPLLIKALNNDEVNVKADAFLCLADIAKDSPSL 243
D++P L L++++ N AF L I +DS +
Sbjct: 126 DLLPKLCSLLDSEDYNTCEGAFGALQKICEDSAEI 160
Score = 42.0 bits (97), Expect = 2e-04
Identities = 46/412 (11%), Positives = 119/412 (28%), Gaps = 46/412 (11%)
Query: 69 MCAKHVDIRQEVLERNLVALVLKDLTKQNKHYKKTALHMLTCVAQQDERCAGLIEDKDLD 128
++ ++ L +++ L+ + L K++ + +L +A+ + + +
Sbjct: 380 ALDVLANVYRDELLPHILPLLKELLFHHEWVVKESGILVLGAIAEGCMQGMIPYLPELIP 439
Query: 129 SIISSLHDFDPDTRANAALALGGLAKDNKHFAERIVQCGALPPLVQILASPQLSLKHAAA 188
+I L D R+ L A + L++ + ++ AA
Sbjct: 440 HLIQCLSDKKALVRSITCWTLSRYAHWVVSQPPDTYLKPLMTELLKRILDSNKRVQEAAC 499
Query: 189 FALDGIVKHSPELAESASDCDVIPLLIKALNNDEVNVKADAFLCLADI------AKDSPS 242
A + + + ++ L+ A + + + + + + P
Sbjct: 500 SAFATLEEEACTELVPYLA-YILDTLVFAFSKYQHKNLLILYDAIGTLADSVGHHLNKPE 558
Query: 243 LASTIADGATTLAVEHLTYPHGLVQK-NAATLLRDMCKHNLRLANLVVLAGGLDGLLRLI 301
+ L + + + V ++ + + +
Sbjct: 559 YIQMLMPPLIQKWNMLKDEDKDLFPLLECLSSVATALQSGFLPYCEPVYQRCVNLVQKTL 618
Query: 302 DCNGGYNSLPA----------IMALGYMSAQSEQIAEQIIELQGVGSL-QTILQCPHKEQ 350
N+ P I+AL +S +E + I +L ++ + QC +
Sbjct: 619 AQAMLNNAQPDQYEAPDKDFMIVALDLLSGLAEGLGGNIEQLVARSNILTLMYQCMQDKM 678
Query: 351 LQV--AAAWTLGQIGKHSVDNVTALCE-------ENVLSTLLSKITQTC---------VS 392
+V ++ LG + K +V N+ +S +
Sbjct: 679 PEVRQSSFALLGDLTKACFQHVKPCIADFMPILGTNLNPEFISVCNNATWAIGEISIQMG 738
Query: 393 DNLKSKCKNALNILIPKCENPKELEQMLLGNVSEELLASILCAFAKILPCDP 444
++ L+ L+ P N + LL + ++ P
Sbjct: 739 IEMQPYIPMVLHQLVEIINRP---------NTPKTLLENTAITIGRLGYVCP 781
>d1b3ua_ a.118.1.2 (A:) Constant regulatory domain of protein
phosphatase 2a, pr65alpha {Human (Homo sapiens) [TaxId:
9606]}
Length = 588
Score = 50.9 bits (120), Expect = 2e-07
Identities = 38/186 (20%), Positives = 71/186 (38%), Gaps = 15/186 (8%)
Query: 11 DHYQRARLCFVQTMSAFADKPSTIHFLKDLNVVDLIVPLLADKVPSIQHAALATLGKLMC 70
D R RL ++ M A + F + LN L + L D V +I+ AA + L KL+
Sbjct: 413 DAKWRVRLAIIEYMPLLAGQLGVEFFDEKLN--SLCMAWLVDHVYAIREAATSNLKKLVE 470
Query: 71 AKHVDIRQEVLERNLVALVLKDLTKQNKHYKKTALHMLTCVAQQDERCAGLIEDKDLDSI 130
+E ++ VL N ++ T L + +++ + + L ++
Sbjct: 471 K----FGKEWAHATIIPKVLAMSGDPNYLHRMTTLFCINVLSEVCGQ--DITTKHMLPTV 524
Query: 131 ISSLHDFDPDTRANAALALGGLAK--DNKHFAERIVQCGALPPLVQILASPQLSLKHAAA 188
+ D + R N A +L + DN + L ++ + +K+ A
Sbjct: 525 LRMAGDPVANVRFNVAKSLQKIGPILDNSTLQSEVKPI-----LEKLTQDQDVDVKYFAQ 579
Query: 189 FALDGI 194
AL +
Sbjct: 580 EALTVL 585
Score = 44.4 bits (103), Expect = 3e-05
Identities = 37/226 (16%), Positives = 79/226 (34%), Gaps = 14/226 (6%)
Query: 12 HYQRARLCFVQTMSAFADKPSTIHFLKDLNVVDLIVPLLADKVPSIQHAALATLGKLMCA 71
RL + + + + L IV L D ++ A + + L
Sbjct: 375 ECPEVRLNIISNLDCVNEVIGIRQLSQSLL--PAIVELAEDAKWRVRLAIIEYMPLLAGQ 432
Query: 72 KHVDIRQEVLERNLVALVLKDLTKQNKHYKKTALHMLTCVAQQDERCAGLIEDKDLDSII 131
+ E + L +L + L ++ A L + ++ + + ++
Sbjct: 433 ----LGVEFFDEKLNSLCMAWLVDHVYAIREAATSNLKKLVEKFGKE--WAHATIIPKVL 486
Query: 132 SSLHDFDPDTRANAALALGGLAKDNKHFAERIVQCGALPPLVQILASPQLSLKHAAAFAL 191
+ D + R + L++ + I LP ++++ P +++ A +L
Sbjct: 487 AMSGDPNYLHRMTTLFCINVLSE---VCGQDITTKHMLPTVLRMAGDPVANVRFNVAKSL 543
Query: 192 DGIVKHSPELAESASDCDVIPLLIKALNNDEVNVKADAFLCLADIA 237
K P L S +V P+L K + +V+VK A L ++
Sbjct: 544 ---QKIGPILDNSTLQSEVKPILEKLTQDQDVDVKYFAQEALTVLS 586
Score = 38.6 bits (88), Expect = 0.002
Identities = 14/104 (13%), Positives = 35/104 (33%), Gaps = 6/104 (5%)
Query: 135 HDFDPDTRANAALALGGLAKDNKHFAERIVQCGALPPLVQILASPQLSLKHAAAFALDGI 194
D R A L L + F + +P ++ + P + F ++ +
Sbjct: 451 VDHVYAIREAATSNLKKLVE---KFGKEWAHATIIPKVLAMSGDPNYLHRMTTLFCINVL 507
Query: 195 VKHSPELAESASDCDVIPLLIKALNNDEVNVKADAFLCLADIAK 238
+ + + ++P +++ + NV+ + L I
Sbjct: 508 SEV---CGQDITTKHMLPTVLRMAGDPVANVRFNVAKSLQKIGP 548
Score = 38.2 bits (87), Expect = 0.002
Identities = 15/99 (15%), Positives = 39/99 (39%), Gaps = 3/99 (3%)
Query: 11 DHYQRARLCFVQTMSAFADKPSTIHFLKDLNVVDLIVPLLADKVPSIQHAALATLGKLMC 70
D R+ + ++ ++ K + + ++ + D V +++ +L K+
Sbjct: 491 DPNYLHRMTTLFCINVLSEVCGQDITTKHM--LPTVLRMAGDPVANVRFNVAKSLQKIGP 548
Query: 71 AKHVDIRQEVLERNLVALVLKDLTKQNKHYKKTALHMLT 109
Q ++ L L +D K++ + AL +L+
Sbjct: 549 ILDNSTLQSEVKPILEKL-TQDQDVDVKYFAQEALTVLS 586
Score = 34.8 bits (78), Expect = 0.028
Identities = 47/437 (10%), Positives = 128/437 (29%), Gaps = 32/437 (7%)
Query: 86 VALVLKDLTKQNKHYKKTALHMLTCVAQ--QDERCAGLIEDKDLDSIISSLHDFDPDTRA 143
+A+++ +L ++ + ++ L+ +A ER +L ++ + +
Sbjct: 12 IAVLIDELRNEDVQLRLNSIKKLSTIALALGVERTR-----SELLPFLTDTIYDEDEVLL 66
Query: 144 NAALALGGLAK--DNKHFAERIVQCGALPPLVQILASPQLSLKHAAAFALDGIVKHSPEL 201
A LG + + LPPL + + ++ A +L I
Sbjct: 67 ALAEQLGTFTTLVGGPEYVHCL-----LPPLESLATVEETVVRDKAVESLRAISHE---H 118
Query: 202 AESASDCDVIPLLIKALNNDEVNVKADAFLCLADIAKDSPSLASTIADGATTLAVEHLTY 261
+ S + +PL+ + D + A + P ++S + +
Sbjct: 119 SPSDLEAHFVPLVKRLAGGDWFTSRTSACGLFSVCY---PRVSSAVKAELRQYFRNLCSD 175
Query: 262 PHGLVQKNAATLLRDMCKHNLRLANLVVLAGGLDGLLRLIDCNGGYNSLPAIMALGYMSA 321
+V++ AA+ L + K + L + ++ A + + +
Sbjct: 176 DTPMVRRAAASKLGEFAKVLELDNVKSEIIPMFSNLASDEQDSVRLLAVEACVNIAQLLP 235
Query: 322 QSEQIAEQIIELQGVGSLQTILQCPHKEQLQVAAAWTLGQIGKHSVDNVTALCEENVLST 381
Q + A + L+ +++ A ++ K +T
Sbjct: 236 QEDLEALVMPTLRQ-------AAEDKSWRVRYMVADKFTELQKAVGPEITKTDLVPAFQN 288
Query: 382 LLSKITQTCVSDNLKSKCKNALNILIPKCENPK-----ELEQMLLGNVSEELLASILCAF 436
L+ + + N+ EN + L+ + ++ + +++
Sbjct: 289 LMKDCEAEVRAAASHKVKEFCENLSADCRENVIMSQILPCIKELVSDANQHVKSALASVI 348
Query: 437 AKILPCDPVARRSFVTSHCLRKVQEIEPTPEIAPHLKTINACFPNEVIHFVSPHYLEDLI 496
+ P + E + ++ I +S L ++
Sbjct: 349 MGLSPILGKDNTIEHLLPLFLAQLKDECPEVRLNIISNLDCVNEVIGIRQLSQSLLPAIV 408
Query: 497 NRLDQFNPQKSSNLPDC 513
+ + + +
Sbjct: 409 ELAEDAKWRVRLAIIEY 425
>d1oyza_ a.118.1.16 (A:) Hypothetical protein YibA {Escherichia coli
[TaxId: 562]}
Length = 276
Score = 48.7 bits (114), Expect = 6e-07
Identities = 36/254 (14%), Positives = 67/254 (26%), Gaps = 23/254 (9%)
Query: 117 RCAGLIEDK---DLDSIISSLHDFDPDTRANAALALGGLAKDNKHFAERIVQCGALPPLV 173
+ GL + D + L D + R ++A L + A+ +
Sbjct: 8 KEYGLYNQCKKLNDDELFRLLDDHNSLKRISSARVLQLRGGQD-----------AVRLAI 56
Query: 174 QILASPQLSLKHAAAFALDGIVKHSPELAESASDCDVIPLLIKALNNDEVNVKADAFLCL 233
+ + + AF L I + D L ALN+ V+A A
Sbjct: 57 EFCSDKNYIRRDIGAFILGQIKIC-----KKCEDNVFNILNNMALNDKSACVRATAIEST 111
Query: 234 ADIAKDSPSLASTIADGATTLAVEHLTYPHGLV----QKNAATLLRDMCKHNLRLANLVV 289
A K +P + I + + A + T + + L+ N V
Sbjct: 112 AQRCKKNPIYSPKIVEQSQITAFDKSTNVRRATAFAISVINDKATIPLLINLLKDPNGDV 171
Query: 290 LAGGLDGLLRLIDCNGGYNSLPAIMALGYMSAQSEQIAEQIIELQGVGSLQTILQCPHKE 349
+ N M + + + L + K
Sbjct: 172 RNWAAFAININKYDNSDIRDCFVEMLQDKNEEVRIEAIIGLSYRKDKRVLSVLCDELKKN 231
Query: 350 QLQVAAAWTLGQIG 363
+ G++G
Sbjct: 232 TVYDDIIEAAGELG 245
Score = 34.8 bits (78), Expect = 0.022
Identities = 22/148 (14%), Positives = 47/148 (31%), Gaps = 21/148 (14%)
Query: 43 VDLIVPLLADKVPSIQHAALATLGKLMCAKHVDIRQEVLERNLVALVLKDLTKQNKHYKK 102
D + LL D + ++ L ++ V L ++ + +N +
Sbjct: 21 DDELFRLLDDHNSLKRISSARVLQLRG------------GQDAVRLAIEFCSDKNYIRRD 68
Query: 103 TALHMLTCVAQQDERCAGLIEDKDLDSIISSLHDFDPDTRANAALALGGLAKDNKHFAER 162
+L + + + +L+D RA A + K N ++ +
Sbjct: 69 IGAFILGQIKICKKCEDNVFNIL----NNMALNDKSACVRATAIESTAQRCKKNPIYSPK 124
Query: 163 IVQCGALPPLVQILASPQLSLKHAAAFA 190
IV+ +++ A AFA
Sbjct: 125 IVEQ-----SQITAFDKSTNVRRATAFA 147
>d1ibrb_ a.118.1.1 (B:) Importin beta {Human (Homo sapiens) [TaxId:
9606]}
Length = 458
Score = 45.9 bits (107), Expect = 8e-06
Identities = 31/202 (15%), Positives = 61/202 (30%), Gaps = 19/202 (9%)
Query: 43 VDLIVPLLADKVPSIQHAALATLGKLMCAKHVDIRQEVLERNLVALVLKDLTKQNKHYKK 102
+ + + + + + + + +E + A + +K Y K
Sbjct: 260 FAITIEAMKSDIDEVALQGIEFWSNVCD----EEMDLAIEASEAAEQGRPPEHTSKFYAK 315
Query: 103 TALHMLTCVAQQDERCAGLIEDKDLDSIISSLHDFDPDTRANAALALGGLAKDNKHFAER 162
AL L L ++ + D D N A G E
Sbjct: 316 GALQYLV---------------PILTQTLTKQDENDDDDDWNPCKAAGVCLMLLATCCED 360
Query: 163 IVQCGALPPLVQILASPQLSLKHAAAFALDGIVKHSPELAESASDCDVIPLLIKALNNDE 222
+ LP + + + +P + AA A I++ +P LI+ + +
Sbjct: 361 DIVPHVLPFIKEHIKNPDWRYRDAAVMAFGCILEGPEPSQLKPLVIQAMPTLIELMKDPS 420
Query: 223 VNVKADAFLCLADIAKDSPSLA 244
V V+ A + I + P A
Sbjct: 421 VVVRDTAAWTVGRICELLPEAA 442
Score = 34.0 bits (76), Expect = 0.052
Identities = 39/308 (12%), Positives = 94/308 (30%), Gaps = 32/308 (10%)
Query: 92 DLTKQNKHYKKTALHMLTCVAQQDERCAGLIEDKDLDSIISSLH------DFDPDTRANA 145
+ L + + + I++++ + + + A
Sbjct: 134 ANVTNPNSTEHMKESTLEAIGYICQDIDPEQLQDKSNEILTAIIQGMRKEEPSNNVKLAA 193
Query: 146 ALALGGLAK-DNKHFAERIVQCGALPPLVQILASPQLSLKHAAAFALDGIVKHSPELAES 204
AL + +F + + + + + P ++ AA L I+ + E+
Sbjct: 194 TNALLNSLEFTKANFDKESERHFIMQVVCEATQCPDTRVRVAALQNLVKIMSLYYQYMET 253
Query: 205 ASDCDVIPLLIKALNNDEVNVKADAFLCLADIAKDSPSLASTIADGATTLAVEHLTYPHG 264
+ + I+A+ +D V +++ + LA ++ A T
Sbjct: 254 YMGPALFAITIEAMKSDIDEVALQGIEFWSNVCDEEMDLAIEASEAAEQGRPPEHTSKFY 313
Query: 265 LVQK--------NAATLLRDMCKHNLRLANLVVLAGGLDGLLRLIDCNGGYNSLP----- 311
+D + L L + + + LP
Sbjct: 314 AKGALQYLVPILTQTLTKQDENDDDDDWNPCKAAGVCLMLLATCCEDDIVPHVLPFIKEH 373
Query: 312 -----------AIMALGYMSAQSEQIAEQIIELQGVGSLQTILQCPHKEQLQVAAAWTLG 360
A+MA G + E + + +Q + +L +++ P ++ AAWT+G
Sbjct: 374 IKNPDWRYRDAAVMAFGCILEGPEPSQLKPLVIQAMPTLIELMKDPS-VVVRDTAAWTVG 432
Query: 361 QIGKHSVD 368
+I + +
Sbjct: 433 RICELLPE 440
>d1lrva_ a.118.1.5 (A:) Leucine-rich repeat variant {Azotobacter
vinelandii [TaxId: 354]}
Length = 233
Score = 36.6 bits (84), Expect = 0.004
Identities = 24/167 (14%), Positives = 51/167 (30%), Gaps = 18/167 (10%)
Query: 126 DLDSIISSLHDFDPDTRANAALALGG-----LAKD-NKHFAERIVQCGALPPLVQILASP 179
++++ + D D R A L L D ++ + L L Q+ A
Sbjct: 67 PVEALTPLIRDSDEVVRRAVAYRLPREQLSALMFDEDREVRITVADRLPLEQLEQMAADR 126
Query: 180 QLSLKHAA-----AFALDGIVKHS-PELAESASDCDVIPLLIKALNNDEVNVKADAFLC- 232
++ L ++ ++ + + L + E V+
Sbjct: 127 DYLVRAYVVQRIPPGRLFRFMRDEDRQVRKLVAKRLPEESLGLMTQDPEPEVRRIVASRL 186
Query: 233 ----LADIAKD-SPSLASTIADGATTLAVEHLTYPHGLVQKNAATLL 274
L ++ D ++ + A+ A+ L P V+ A L
Sbjct: 187 RGDDLLELLHDPDWTVRLAAVEHASLEALRELDEPDPEVRLAIAGRL 233
>d1qgra_ a.118.1.1 (A:) Importin beta {Human (Homo sapiens) [TaxId:
9606]}
Length = 876
Score = 34.3 bits (77), Expect = 0.040
Identities = 29/177 (16%), Positives = 58/177 (32%), Gaps = 9/177 (5%)
Query: 70 CAKHVDIRQEVLERNLVALVLKDLTKQNKHYKKTALHMLTCVAQQDERCAGLIEDKDLDS 129
K + E L++ L T + + + + + D
Sbjct: 547 VQKTTLVIMERLQQVLQMESHIQSTSDRIQFNDLQSLLCATLQNVLRKVQHQDALQISDV 606
Query: 130 IISSLHDF------DPDTRANAALALGGLAKDNKHFAERIVQCGALPPLVQILASPQLSL 183
+++SL + +A +A+ L + + ++ P L L +
Sbjct: 607 VMASLLRMFQSTAGSGGVQEDALMAVSTLVEVLGGEFLKYMEA-FKPFLGIGLKNYAEYQ 665
Query: 184 KHAAAFALDGIVKHSPELAESASDCDVIPLLIKALNNDEVN--VKADAFLCLADIAK 238
AA L G + + + +V+ LL++ L N+ V+ VK DIA
Sbjct: 666 VCLAAVGLVGDLCRALQSNIIPFCDEVMQLLLENLGNENVHRSVKPQILSVFGDIAL 722
>d2bpta1 a.118.1.1 (A:1-861) Importin beta {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 861
Score = 34.0 bits (76), Expect = 0.057
Identities = 21/123 (17%), Positives = 35/123 (28%), Gaps = 22/123 (17%)
Query: 130 IISSLHDFDPDTRANAALALGGLAKDNKHFAERIVQCGALPPLVQILASPQLSL--KHAA 187
+ +S+ D + R + L L+ DN Q+L L + A
Sbjct: 10 LENSILSPDQNIRLTSETQLKKLSNDNFL--------QFAGLSSQVLIDENTKLEGRILA 61
Query: 188 AFALDGIVKHSPELAESASDCDVIP------------LLIKALNNDEVNVKADAFLCLAD 235
A L + + I + AL + E + A +A
Sbjct: 62 ALTLKNELVSKDSVKTQQFAQRWITQVSPEAKNQIKTNALTALVSIEPRIANAAAQLIAA 121
Query: 236 IAK 238
IA
Sbjct: 122 IAD 124
Score = 33.6 bits (75), Expect = 0.059
Identities = 14/75 (18%), Positives = 27/75 (36%), Gaps = 3/75 (4%)
Query: 170 PPLVQILASPQLSLKHAAAFALDGIVKHSPELAESASDCDVIPLLIKALNNDEVN--VKA 227
P L++ L + A + I E SD ++ +L + ++N +K
Sbjct: 642 PYLLKALNQVDSPVSITAVGFIADISNSLEEDFRRYSD-AMMNVLAQMISNPNARRELKP 700
Query: 228 DAFLCLADIAKDSPS 242
DIA + +
Sbjct: 701 AVLSVFGDIASNIGA 715
Score = 33.6 bits (75), Expect = 0.069
Identities = 31/256 (12%), Positives = 66/256 (25%), Gaps = 61/256 (23%)
Query: 130 IISSLHDFDPDTRANAALALGGLAKDNKHFAERIVQCGALPPLVQILASPQL--SLKHAA 187
++ +L+ D A + ++ + R + L Q++++P LK A
Sbjct: 644 LLKALNQVDSPVSITAVGFIADISNSLEEDFRRYSD-AMMNVLAQMISNPNARRELKPAV 702
Query: 188 AFALDGIVKHSPELAESASDCDVIPLLIKALNNDEVNVKAD--------------AFLCL 233
I + + D++ L + A N N + A++ +
Sbjct: 703 LSVFGDIASNIGADFIPYLN-DIMALCVAAQNTKPENGTLEALDYQIKVLEAVLDAYVGI 761
Query: 234 ADIAKDSPSL----ASTIADGATTLAVEHLTYPHGLVQKNAATLLRDMCKHNLRLANLVV 289
D P TI +A + Y + A L+ D+
Sbjct: 762 VAGLHDKPEALFPYVGTIFQFIAQVAEDPQLYSEDATSRAAVGLIGDIAAMF-------- 813
Query: 290 LAGGLDGLLRLIDCNGGYNSLPAIMALGYMSAQSEQIAEQIIELQGVGSLQTILQCPHKE 349
S+ + + + I + +
Sbjct: 814 ----------------PDGSIKQFY-------GQDWVIDYIKRTRSGQLFS--------Q 842
Query: 350 QLQVAAAWTLGQIGKH 365
+ A W Q +
Sbjct: 843 ATKDTARWAREQQKRQ 858
>d1te4a_ a.118.1.16 (A:) MTH187 {Archaeon Methanobacterium
thermoautotrophicum [TaxId: 145262]}
Length = 111
Score = 31.4 bits (70), Expect = 0.079
Identities = 25/141 (17%), Positives = 46/141 (32%), Gaps = 33/141 (23%)
Query: 134 LHDFDPDTRANAALALGGLAKDNKHFAERIVQCGALPPLVQILASPQLSLKHAAAFALDG 193
+ D + R + + AL + + A PL++ L++ ++ AAA
Sbjct: 1 MADENKWVRRDVSTALSRMGDE------------AFEPLLESLSNEDWRIRGAAA----- 43
Query: 194 IVKHSPELAESASDCDVIPLLIKALNNDEVNVKADAFLCLADIAKDSPSLASTIADGATT 253
+ + D + LIK L +D V++ A L I +
Sbjct: 44 ------WIIGNFQDERAVEPLIKLLEDDSGFVRSGAARSLEQIGGERV----------RA 87
Query: 254 LAVEHLTYPHGLVQKNAATLL 274
+ G +K A L
Sbjct: 88 AMEKLAETGTGFARKVAVNYL 108
Score = 28.7 bits (63), Expect = 0.59
Identities = 18/143 (12%), Positives = 45/143 (31%), Gaps = 34/143 (23%)
Query: 50 LADKVPSIQHAALATLGKLMCAKHVDIRQEVLERNLVALVLKDLTKQNKHYKKTALHMLT 109
+AD+ ++ L + + E E +L+ L+ ++ + A ++
Sbjct: 1 MADENKWVRRDVSTALSR--------MGDEAFE-----PLLESLSNEDWRIRGAAAWIIG 47
Query: 110 CVAQQDERCAGLIEDKDLDSIISSLHDFDPDTRANAALALGGLAKDNKHFAERIVQCGAL 169
+ ++ +I L D R+ AA +L +I
Sbjct: 48 NFQDER----------AVEPLIKLLEDDSGFVRSGAARSLE-----------QIGGERVR 86
Query: 170 PPLVQILASPQLSLKHAAAFALD 192
+ ++ + + A L+
Sbjct: 87 AAMEKLAETGTGFARKVAVNYLE 109
>d1wfia_ b.15.1.4 (A:) Nuclear migration protein nudC {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 131
Score = 29.9 bits (67), Expect = 0.37
Identities = 11/51 (21%), Positives = 18/51 (35%), Gaps = 4/51 (7%)
Query: 101 KKTALHMLTCVAQQDERCAGLIEDKDLDSIISSLHDFDPDTRANAALALGG 151
K + + D I K ++ S L D D +TR+ + G
Sbjct: 85 KINKMEWWNRLVTSDPE----INTKKINPENSKLSDLDSETRSMVSGPSSG 131
>d2b6ca1 a.118.1.17 (A:3-215) Hypothetical protein EF3068
{Enterococcus faecalis [TaxId: 1351]}
Length = 213
Score = 27.3 bits (60), Expect = 3.8
Identities = 12/76 (15%), Positives = 19/76 (25%), Gaps = 8/76 (10%)
Query: 207 DCDVIPLLIKALNNDEVNVKADA-FLCLADIAKDSPSLASTIADGATTLAVEHLTYPHGL 265
++ + + + A L L K + L T
Sbjct: 117 LTELPTIFALFYGAENFWNRRVALNLQLMLKEKTNQDLLKKAII-------YDRTTEEFF 169
Query: 266 VQKNAATLLRDMCKHN 281
+QK LR K N
Sbjct: 170 IQKAIGWSLRQYSKTN 185
Score = 27.3 bits (60), Expect = 4.3
Identities = 13/31 (41%), Positives = 16/31 (51%)
Query: 352 QVAAAWTLGQIGKHSVDNVTALCEENVLSTL 382
Q A W+L Q K + V L +E VLS L
Sbjct: 171 QKAIGWSLRQYSKTNPQWVEELMKELVLSPL 201
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.318 0.132 0.382
Gapped
Lambda K H
0.267 0.0500 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,854,118
Number of extensions: 83840
Number of successful extensions: 296
Number of sequences better than 10.0: 1
Number of HSP's gapped: 256
Number of HSP's successfully gapped: 52
Length of query: 542
Length of database: 2,407,596
Length adjustment: 90
Effective length of query: 452
Effective length of database: 1,171,896
Effective search space: 529696992
Effective search space used: 529696992
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.5 bits)