BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy12599
(269 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O35344|IMA3_MOUSE Importin subunit alpha-3 OS=Mus musculus GN=Kpna3 PE=1 SV=1
Length = 521
Score = 118 bits (296), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 63/105 (60%), Positives = 80/105 (76%), Gaps = 4/105 (3%)
Query: 168 MRRRRNEVTVELRKNKREETLQKRRNVPLADSTDEDDIE---KMAQVNLDMLVVEAARKD 224
MRR RNEVTVELRKNKR+E L K+RNVP +S ++ D++ K V L+ +++ A D
Sbjct: 25 MRRHRNEVTVELRKNKRDEHLLKKRNVPQEESLEDSDVDADFKAQNVTLEA-ILQNATSD 83
Query: 225 NPELQLLAVQSARKLLSSDKNPPIEALIHSGILPVLVECLERSDR 269
NP +QL AVQ+ARKLLSSD+NPPI+ LI SGILP+LV+CLER D
Sbjct: 84 NPVVQLSAVQAARKLLSSDRNPPIDDLIKSGILPILVKCLERDDN 128
>sp|O00505|IMA3_HUMAN Importin subunit alpha-3 OS=Homo sapiens GN=KPNA3 PE=1 SV=2
Length = 521
Score = 118 bits (296), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 63/105 (60%), Positives = 80/105 (76%), Gaps = 4/105 (3%)
Query: 168 MRRRRNEVTVELRKNKREETLQKRRNVPLADSTDEDDIE---KMAQVNLDMLVVEAARKD 224
MRR RNEVTVELRKNKR+E L K+RNVP +S ++ D++ K V L+ +++ A D
Sbjct: 25 MRRHRNEVTVELRKNKRDEHLLKKRNVPQEESLEDSDVDADFKAQNVTLEA-ILQNATSD 83
Query: 225 NPELQLLAVQSARKLLSSDKNPPIEALIHSGILPVLVECLERSDR 269
NP +QL AVQ+ARKLLSSD+NPPI+ LI SGILP+LV+CLER D
Sbjct: 84 NPVVQLSAVQAARKLLSSDRNPPIDDLIKSGILPILVKCLERDDN 128
>sp|O00629|IMA4_HUMAN Importin subunit alpha-4 OS=Homo sapiens GN=KPNA4 PE=1 SV=1
Length = 521
Score = 116 bits (291), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 63/104 (60%), Positives = 76/104 (73%), Gaps = 2/104 (1%)
Query: 168 MRRRRNEVTVELRKNKREETLQKRRNVPLADSTDEDDIEKMAQVNLDML--VVEAARKDN 225
MRR+RNEV VELRKNKR+E L KRRNVP D ++ DI+ +V L +V+ A DN
Sbjct: 25 MRRQRNEVVVELRKNKRDEHLLKRRNVPHEDICEDSDIDGDYRVQNTSLEAIVQNASSDN 84
Query: 226 PELQLLAVQSARKLLSSDKNPPIEALIHSGILPVLVECLERSDR 269
+QL AVQ+ARKLLSSD+NPPI+ LI SGILP+LV CLER D
Sbjct: 85 QGIQLSAVQAARKLLSSDRNPPIDDLIKSGILPILVHCLERDDN 128
>sp|O35343|IMA4_MOUSE Importin subunit alpha-4 OS=Mus musculus GN=Kpna4 PE=2 SV=1
Length = 521
Score = 116 bits (291), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 63/104 (60%), Positives = 76/104 (73%), Gaps = 2/104 (1%)
Query: 168 MRRRRNEVTVELRKNKREETLQKRRNVPLADSTDEDDIEKMAQVNLDML--VVEAARKDN 225
MRR+RNEV VELRKNKR+E L KRRNVP D ++ DI+ +V L +V+ A DN
Sbjct: 25 MRRQRNEVVVELRKNKRDEHLLKRRNVPQEDICEDSDIDGDYRVQNTSLEAIVQNASSDN 84
Query: 226 PELQLLAVQSARKLLSSDKNPPIEALIHSGILPVLVECLERSDR 269
+QL AVQ+ARKLLSSD+NPPI+ LI SGILP+LV CLER D
Sbjct: 85 QGIQLSAVQAARKLLSSDRNPPIDDLIKSGILPILVHCLERDDN 128
>sp|Q19969|IMA3_CAEEL Importin subunit alpha-3 OS=Caenorhabditis elegans GN=ima-3 PE=1
SV=2
Length = 514
Score = 94.0 bits (232), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/106 (50%), Positives = 69/106 (65%), Gaps = 9/106 (8%)
Query: 169 RRRRNEVTVELRKNKREETLQKRRNVPLADSTDEDDIEKMAQ------VNLDMLVVEAAR 222
+ +RNE V +RK+KREE + KRRN+ ++ EDD E NL L V AA+
Sbjct: 19 KEKRNEEVVSIRKDKREEAISKRRNI---NTQIEDDSETSTTPPGPFDANLLRLTVAAAQ 75
Query: 223 KDNPELQLLAVQSARKLLSSDKNPPIEALIHSGILPVLVECLERSD 268
+P QL AVQ ARK+LS+D+NPPI+ LI SGILPVLV+CL +D
Sbjct: 76 SSDPAEQLTAVQQARKMLSTDRNPPIDDLIGSGILPVLVQCLSSTD 121
>sp|P52293|IMA2_MOUSE Importin subunit alpha-2 OS=Mus musculus GN=Kpna2 PE=1 SV=2
Length = 529
Score = 76.3 bits (186), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/107 (43%), Positives = 66/107 (61%), Gaps = 5/107 (4%)
Query: 167 EMRRRRNEVTVELRKNKREETLQKRRNVPL----ADSTDEDDIEKMAQVNLDML-VVEAA 221
EMRRRR EV VELRK K++E + KRRNV A S +++ VN + +V+
Sbjct: 26 EMRRRRIEVNVELRKAKKDEQMLKRRNVSSFPDDATSPLQENRNNQGTVNWSVEDIVKGI 85
Query: 222 RKDNPELQLLAVQSARKLLSSDKNPPIEALIHSGILPVLVECLERSD 268
+N E QL A Q+ARKLLS +K PPI+ +I +G++P V L ++D
Sbjct: 86 NSNNLESQLQATQAARKLLSREKQPPIDNIIRAGLIPKFVSFLGKTD 132
>sp|P52295|IMA_DROME Importin subunit alpha OS=Drosophila melanogaster GN=Pen PE=1 SV=2
Length = 522
Score = 76.3 bits (186), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/103 (40%), Positives = 69/103 (66%), Gaps = 4/103 (3%)
Query: 169 RRRRNEVTVELRKNKREETLQKRRNVPLADSTD---EDDIEKMAQVNLDMLVVEAARKDN 225
R RR+EVT+ELRK+K+E+ + KRRN+ D T E + + Q+++D +V A ++
Sbjct: 24 RMRRHEVTIELRKSKKEDQMFKRRNINDEDLTSPLKELNGQSPVQLSVDE-IVAAMNSED 82
Query: 226 PELQLLAVQSARKLLSSDKNPPIEALIHSGILPVLVECLERSD 268
E Q L +QSARK+LS ++NPPI+ +I GI+P+ + L+ ++
Sbjct: 83 QERQFLGMQSARKMLSRERNPPIDLMIGHGIVPICIRFLQNTN 125
>sp|P52170|IMA1_XENLA Importin subunit alpha-1 OS=Xenopus laevis GN=kpna1 PE=1 SV=2
Length = 522
Score = 75.5 bits (184), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/107 (42%), Positives = 68/107 (63%), Gaps = 5/107 (4%)
Query: 167 EMRRRRNEVTVELRKNKREETLQKRRNVPLADS---TDEDDIEKMAQVNLDML--VVEAA 221
E+RRRR EV+VELRK K++E + KRRNV L + + E + + QV L +V+
Sbjct: 23 ELRRRRVEVSVELRKAKKDEQILKRRNVCLPEELILSPEKNAMQSVQVPPLSLEEIVQGM 82
Query: 222 RKDNPELQLLAVQSARKLLSSDKNPPIEALIHSGILPVLVECLERSD 268
+PE +L Q+ARK+LS ++NPP+ +I +G++P LVE L R D
Sbjct: 83 NSGDPENELRCTQAARKMLSRERNPPLNDIIEAGLIPKLVEFLSRHD 129
>sp|P52292|IMA2_HUMAN Importin subunit alpha-2 OS=Homo sapiens GN=KPNA2 PE=1 SV=1
Length = 529
Score = 75.1 bits (183), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/107 (43%), Positives = 65/107 (60%), Gaps = 5/107 (4%)
Query: 167 EMRRRRNEVTVELRKNKREETLQKRRNVPL----ADSTDEDDIEKMAQVNLDML-VVEAA 221
EMRRRR EV VELRK K+++ + KRRNV A S +++ VN + +V+
Sbjct: 26 EMRRRRIEVNVELRKAKKDDQMLKRRNVSSFPDDATSPLQENRNNQGTVNWSVDDIVKGI 85
Query: 222 RKDNPELQLLAVQSARKLLSSDKNPPIEALIHSGILPVLVECLERSD 268
N E QL A Q+ARKLLS +K PPI+ +I +G++P V L R+D
Sbjct: 86 NSSNVENQLQATQAARKLLSREKQPPIDNIIRAGLIPKFVSFLGRTD 132
>sp|P52171|IMA2_XENLA Importin subunit alpha-2 OS=Xenopus laevis GN=kpna2 PE=1 SV=2
Length = 523
Score = 69.3 bits (168), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 72/108 (66%), Gaps = 7/108 (6%)
Query: 167 EMRRRRNEVTVELRKNKREETLQKRRNVPLAD----STDEDDIE--KMAQVNLDMLVVEA 220
E+RRRR EV+VELRK K++E + KRRNV + S +++ ++ ++ Q++L+ +V
Sbjct: 23 ELRRRRVEVSVELRKAKKDEQILKRRNVCFPEELILSPEKNAMQSIQVPQLSLEEIVQGM 82
Query: 221 ARKDNPELQLLAVQSARKLLSSDKNPPIEALIHSGILPVLVECLERSD 268
DN E +L + Q+ARK+LS ++NPP+ +I +G++P LVE L +
Sbjct: 83 NSGDN-ENELRSTQAARKMLSKERNPPLNDIIEAGLIPKLVEFLSYHN 129
>sp|O22478|IMA_SOLLC Importin subunit alpha OS=Solanum lycopersicum PE=2 SV=2
Length = 527
Score = 68.2 bits (165), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 61/107 (57%), Gaps = 4/107 (3%)
Query: 166 KEMRRRRNEVTVELRKNKREETLQKRRNVPLADSTDEDDIEKMAQVN--LDML--VVEAA 221
+E RRRR + VE+RKNKREE L K+R L + ++ ++ L+ L ++
Sbjct: 23 EEGRRRREDNMVEIRKNKREENLLKKRREGLLQAQQFPSTAAVSHLDKKLETLPELIAGV 82
Query: 222 RKDNPELQLLAVQSARKLLSSDKNPPIEALIHSGILPVLVECLERSD 268
D+ LQL RKLLS ++NPPIE +I SG++P VE L R D
Sbjct: 83 WSDDSSLQLECTTQFRKLLSIERNPPIEEVIQSGVVPRFVEFLARDD 129
>sp|O04294|IMA2_ARATH Importin subunit alpha-2 OS=Arabidopsis thaliana GN=KAP2 PE=1 SV=2
Length = 531
Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/110 (40%), Positives = 65/110 (59%), Gaps = 8/110 (7%)
Query: 166 KEMRRRRNEVTVELRKNKREETLQKRR---NVPLADSTD--EDDIEKMAQV--NLDMLVV 218
+E RRRR + VE+RKNKREE LQK+R ++ +T E D+ Q+ NL +V
Sbjct: 23 EEGRRRREDNLVEIRKNKREENLQKKRFTSSMAFGSATGQTEQDLSSANQLKDNLPAMVA 82
Query: 219 EAARKDNPELQLLAVQSARKLLSSDKNPPIEALIHSGILPVLVECLERSD 268
+D+ QL A RKLLS ++NPPI ++ SG++P +V+ L R D
Sbjct: 83 GIWSEDSNS-QLEATNLLRKLLSIEQNPPINEVVQSGVVPRVVKFLSRDD 131
>sp|Q76P29|IMAB_DICDI Importin subunit alpha-B OS=Dictyostelium discoideum
GN=DDB_G0272318 PE=3 SV=1
Length = 516
Score = 66.2 bits (160), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 62/104 (59%), Gaps = 3/104 (2%)
Query: 167 EMRRRRNEVTVELRKNKREETLQKRRN--VPLADSTDEDDIEKMAQVNLDMLVVEAARKD 224
E RR+R E ++ +RKNKREE+L K+R VP + D + L LV E +
Sbjct: 21 ESRRKREEASLSIRKNKREESLLKKRTQAVPGSTPVKVDSLINQRLEQLPSLVAEI-NSE 79
Query: 225 NPELQLLAVQSARKLLSSDKNPPIEALIHSGILPVLVECLERSD 268
NP+L L + + RKLLS +K+PPIE +I +GI+P LV+ L D
Sbjct: 80 NPDLILKSTTAFRKLLSIEKSPPIEEVIKTGIVPRLVKFLYMQD 123
>sp|Q96321|IMA1_ARATH Importin subunit alpha-1 OS=Arabidopsis thaliana GN=KAP1 PE=1 SV=2
Length = 532
Score = 65.5 bits (158), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 63/113 (55%), Gaps = 17/113 (15%)
Query: 166 KEMRRRRNEVTVELRKNKREETLQKRR--------NVPLADSTDEDDIEKMAQVNLDML- 216
+E RRRR + VE+RK+KREE+L K+R P A + D LD L
Sbjct: 23 EEGRRRREDNMVEIRKSKREESLMKKRREGMQALQGFPSASAASVDK-------KLDSLK 75
Query: 217 -VVEAARKDNPELQLLAVQSARKLLSSDKNPPIEALIHSGILPVLVECLERSD 268
+V D+P LQL + RKLLS +++PPIE +I +G++P VE L++ D
Sbjct: 76 DMVAGVWSDDPALQLESTTQFRKLLSIERSPPIEEVISAGVVPRFVEFLKKED 128
>sp|A9QM74|IMA8_HUMAN Importin subunit alpha-8 OS=Homo sapiens GN=KPNA7 PE=1 SV=1
Length = 516
Score = 64.3 bits (155), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 62/101 (61%), Gaps = 2/101 (1%)
Query: 169 RRRRNEVTVELRKNKREETLQKRRNV-PLADSTDEDDIEKMAQVNLDML-VVEAARKDNP 226
R++R V++ELRK K++E KRRN+ T + K V+L + +++ +P
Sbjct: 25 RQQRMAVSLELRKAKKDEQTLKRRNITSFCPDTPSEKTAKGVAVSLTLGEIIKGVNSSDP 84
Query: 227 ELQLLAVQSARKLLSSDKNPPIEALIHSGILPVLVECLERS 267
L A Q+ARK+LS +KNPP++ +I +G++P +VE L+ S
Sbjct: 85 VLCFQATQTARKMLSQEKNPPLKLVIEAGLIPRMVEFLKSS 125
>sp|C1JZ66|IMA8_BOVIN Importin subunit alpha-8 OS=Bos taurus GN=KPNA7 PE=1 SV=2
Length = 522
Score = 63.9 bits (154), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 64/100 (64%), Gaps = 3/100 (3%)
Query: 169 RRRRNEVTVELRKNKREETLQKRRNVPLADSTDEDDIEKMAQVNLDML-VVEAARKDNPE 227
R++R V++ELRK K++E KRRN+ D + + ++ V+L + ++ +PE
Sbjct: 25 RQQRIAVSLELRKAKKDEQALKRRNI--TDVSLDPSDQQTKGVSLTLQEIISGVNASDPE 82
Query: 228 LQLLAVQSARKLLSSDKNPPIEALIHSGILPVLVECLERS 267
L A Q+ARK+LS +KNPP++ ++ +G++P LVE L+ S
Sbjct: 83 LCFQATQAARKMLSREKNPPLKLIVDAGLIPRLVELLKSS 122
>sp|Q02821|IMA1_YEAST Importin subunit alpha OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=SRP1 PE=1 SV=1
Length = 542
Score = 63.2 bits (152), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 62/110 (56%), Gaps = 13/110 (11%)
Query: 167 EMRRRRNEVTVELRKNKREETLQKRRN-VPLADSTDEDDIEKMAQVNLDMLVVEAARKDN 225
E+RRRR+ VELRK KR+E L KRRN +P D D D+ E + V+ D +++
Sbjct: 31 ELRRRRDTQQVELRKAKRDEALAKRRNFIPPTDGADSDE-EDESSVSADQQFYSQLQQEL 89
Query: 226 PEL-----------QLLAVQSARKLLSSDKNPPIEALIHSGILPVLVECL 264
P++ QL A R++LS + PPI+ +I +G++P LVE +
Sbjct: 90 PQMTQQLNSDDMQEQLSATVKFRQILSREHRPPIDVVIQAGVVPRLVEFM 139
>sp|O14063|IMA1_SCHPO Importin subunit alpha-1 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=cut15 PE=1 SV=1
Length = 542
Score = 62.8 bits (151), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 63/113 (55%), Gaps = 15/113 (13%)
Query: 167 EMRRRRNEVTVELRKNKREETLQKRRN-----------VPLADSTDEDDIEKMAQVNLDM 215
E+RRRR +E+RK KREE L KRRN +PL + E+D+E Q+ D+
Sbjct: 26 ELRRRRETQQIEIRKQKREENLNKRRNLVDVQEPAEETIPL-EQDKENDLELELQLP-DL 83
Query: 216 LVVEAARKDNPELQLLAVQSARKLLSSDKNPPIEALIHSGILPVLVECLERSD 268
L +A D+ E Q+ A RK LS + NPPI+ +I +G++P VE L +
Sbjct: 84 L--KALYSDDIEAQIQATAKFRKALSKETNPPIQKVIDAGVVPRFVEFLSHEN 134
>sp|Q71VM4|IMA1A_ORYSJ Importin subunit alpha-1a OS=Oryza sativa subsp. japonica
GN=Os01g0253300 PE=1 SV=2
Length = 526
Score = 62.4 bits (150), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 63/112 (56%), Gaps = 15/112 (13%)
Query: 166 KEMRRRRNEVTVELRKNKREETLQKRRN--------VPLADSTDEDD-IEKMAQVNLDML 216
+E RRRR + VE+RK++REE+L K+R VP + +T D +E + +
Sbjct: 23 EEGRRRREDNMVEIRKSRREESLLKKRREGLQAQAPVPASAATGVDKKLESLPAM----- 77
Query: 217 VVEAARKDNPELQLLAVQSARKLLSSDKNPPIEALIHSGILPVLVECLERSD 268
+ D+ LQL A RKLLS +++PPIE +I SG++P V+ L R D
Sbjct: 78 -IGGVYSDDNNLQLEATTQFRKLLSIERSPPIEEVIQSGVVPRFVQFLTRED 128
>sp|Q9SLX0|IMA1B_ORYSJ Importin subunit alpha-1b OS=Oryza sativa subsp. japonica
GN=Os05g0155500 PE=1 SV=2
Length = 534
Score = 60.5 bits (145), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 67/111 (60%), Gaps = 9/111 (8%)
Query: 167 EMRRRRNEVTVELRKNKREETLQKRR--NVPLADSTDEDDIEKMA-----QVNLDML--V 217
E RRRR + VE+RK++REE+L K+R +P A + +A Q L+ L +
Sbjct: 24 EGRRRREDNMVEIRKSRREESLLKKRRDGLPAAAAAAAAASPLLAHSSALQQKLEGLPAM 83
Query: 218 VEAARKDNPELQLLAVQSARKLLSSDKNPPIEALIHSGILPVLVECLERSD 268
V+A + D+ +QL A RKLLS +++PPIE +I++G++P + L+R D
Sbjct: 84 VQAVQSDDSAVQLEATTQFRKLLSIERSPPIEEVINTGVVPRFIAFLQRED 134
>sp|O94374|IMA2_SCHPO Importin subunit alpha-2 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=imp1 PE=1 SV=1
Length = 539
Score = 60.5 bits (145), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 58/108 (53%), Gaps = 9/108 (8%)
Query: 167 EMRRRRNEVTVELRKNKREETLQKRRNVPLADSTDEDDIEKMAQVNLDM---------LV 217
E+RR+R E +E+RK KREE+L KRRN+ D D E+ Q + M +
Sbjct: 23 ELRRQREEQQIEIRKQKREESLNKRRNLNAVLQNDIDVEEEADQSQVQMEQQMKDEFPKL 82
Query: 218 VEAARKDNPELQLLAVQSARKLLSSDKNPPIEALIHSGILPVLVECLE 265
D+ ELQL AV RK LS + +PPI+ +I G++ V+ LE
Sbjct: 83 TADVMSDDIELQLGAVTKFRKYLSKETHPPIDQVIACGVVDRFVQFLE 130
>sp|C6K7I2|IMA8_PIG Importin subunit alpha-8 OS=Sus scrofa GN=KPNA7 PE=2 SV=2
Length = 507
Score = 58.5 bits (140), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 60/104 (57%), Gaps = 12/104 (11%)
Query: 169 RRRRNEVTVELRKNKREETLQKRRNV-----PLADSTDEDDIEKMAQVNLDMLVVEAARK 223
R++R V++ELRK K++E KRRN+ P T+ A++ L ++
Sbjct: 25 RQQRLAVSLELRKAKKDEQALKRRNITTASDPFVQQTNG------AKLTLQE-IIHGVNA 77
Query: 224 DNPELQLLAVQSARKLLSSDKNPPIEALIHSGILPVLVECLERS 267
+PE A Q+ARK+LS ++NPP++ ++ +G++P LV+ L S
Sbjct: 78 SDPEQCFQATQAARKMLSQERNPPLKLMVEAGLIPRLVQLLRSS 121
>sp|P91276|IMA2_CAEEL Importin subunit alpha-2 OS=Caenorhabditis elegans GN=ima-2 PE=1
SV=1
Length = 531
Score = 57.0 bits (136), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 60/113 (53%), Gaps = 17/113 (15%)
Query: 166 KEMRRRRNEVTVELRKNKREETLQKRRNVPLAD--STDEDDIEKMAQVNLDMLVVEAARK 223
+E+RRRR E +VE+RK K + + KRRN+ D E ++E+ +++ + R
Sbjct: 32 EELRRRRTECSVEIRKQKGADMMMKRRNIVDVDEGGNSESELEEPEKISHQQ---SSTRL 88
Query: 224 DNPELQLL------------AVQSARKLLSSDKNPPIEALIHSGILPVLVECL 264
N E++ + +S RK LS KNPPI+ +IH G+L LV+ L
Sbjct: 89 SNDEIRAILSNNPSEDDMVRCFESLRKSLSKTKNPPIDEVIHCGLLQALVQAL 141
>sp|Q503E9|IMA5_DANRE Importin subunit alpha-6 OS=Danio rerio GN=kpna5 PE=2 SV=2
Length = 536
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 60/105 (57%), Gaps = 13/105 (12%)
Query: 177 VELRKNKREETLQKRRNV--PLADST------DEDDIEKMAQVNLDML----VVEAARKD 224
++LRK KREE L KRRNV P D + + D+ V+ + + V++ +
Sbjct: 33 IQLRKQKREEQLFKRRNVSLPPGDESMLECPIQDPDVSSTVPVSGEGVITQDVIQMIFSE 92
Query: 225 NPELQLLAVQSARKLLSSDKNPPIEALIHS-GILPVLVECLERSD 268
+P+ QL+A Q RKLLS + NPPI+ +I + G++ VE L RSD
Sbjct: 93 DPDQQLIATQKFRKLLSKEPNPPIDEVIGTPGVVNRFVEFLRRSD 137
>sp|C0LLJ0|IMA8_MOUSE Importin subunit alpha-8 OS=Mus musculus GN=Kpna7 PE=1 SV=1
Length = 499
Score = 52.4 bits (124), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 65/107 (60%), Gaps = 5/107 (4%)
Query: 165 DKEM---RRRRNEVTVELRKNKREETLQKRRNVPLADSTDEDDIEKMAQVNLDML-VVEA 220
KEM R++R +++LRK +++E + KRRN+ L S+D + +VN + +++A
Sbjct: 18 GKEMSLPRQQRIASSLQLRKTRKDEQVLKRRNIDLF-SSDMVSQALVKEVNFTLDDIIQA 76
Query: 221 ARKDNPELQLLAVQSARKLLSSDKNPPIEALIHSGILPVLVECLERS 267
+P L A ++AR+++S + PP+ +I +G++P LV+ L+ +
Sbjct: 77 VNSSDPILHFRATRAAREMISQENTPPLNLIIEAGLIPKLVDFLKAT 123
>sp|Q56R16|IMA5_RAT Importin subunit alpha-6 OS=Rattus norvegicus GN=Kpna5 PE=2 SV=1
Length = 536
Score = 51.6 bits (122), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 58/105 (55%), Gaps = 13/105 (12%)
Query: 177 VELRKNKREETLQKRRNVPLADSTD--------EDDIEKMAQV-NLDML---VVEAARKD 224
++LRK KREE L KRRNV L + D + D+ + DM+ +++ +
Sbjct: 33 IQLRKQKREEQLFKRRNVSLPRNDDCMLESPIQDPDVSSTVPIPEEDMITADMIQMIFSN 92
Query: 225 NPELQLLAVQSARKLLSSDKNPPIEALIH-SGILPVLVECLERSD 268
N E QL A Q RKLLS + NPPI+ +I G++ V+ LER++
Sbjct: 93 NAEQQLTATQKFRKLLSKEPNPPIDQVIQKPGVVQRFVKFLERNE 137
>sp|O15131|IMA5_HUMAN Importin subunit alpha-6 OS=Homo sapiens GN=KPNA5 PE=1 SV=2
Length = 536
Score = 51.2 bits (121), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 57/108 (52%), Gaps = 19/108 (17%)
Query: 177 VELRKNKREETLQKRRNVPLADSTDEDDIEKMAQ---------------VNLDMLVVEAA 221
++LRK KREE L KRRNV L + DE +E Q V DM V+
Sbjct: 33 IQLRKQKREEQLFKRRNVYLPRN-DESMLESPIQDPDISSTVPIPEEEVVTTDM--VQMI 89
Query: 222 RKDNPELQLLAVQSARKLLSSDKNPPIEALIH-SGILPVLVECLERSD 268
+N + QL A Q RKLLS + NPPI+ +I G++ V+ LER++
Sbjct: 90 FSNNADQQLTATQKFRKLLSKEPNPPIDQVIQKPGVVQRFVKFLERNE 137
>sp|Q5ZML1|IMA1_CHICK Importin subunit alpha-1 OS=Gallus gallus GN=KPNA1 PE=2 SV=1
Length = 538
Score = 51.2 bits (121), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 57/107 (53%), Gaps = 19/107 (17%)
Query: 177 VELRKNKREETLQKRRNVP----------LADSTDED------DIEKMAQVNLDMLVVEA 220
++LRK KREE L KRRNV ++D + ++ A + DM +E
Sbjct: 33 LQLRKQKREEQLFKRRNVATAEEEAEEEVMSDGGFHEAQMNNMEMTSSAVITSDM--IEM 90
Query: 221 ARKDNPELQLLAVQSARKLLSSDKNPPIEALIHS-GILPVLVECLER 266
++PE QL A Q RKLLS + NPPI+ +I + G++ VE L+R
Sbjct: 91 IFSNSPEQQLSATQKFRKLLSKEPNPPIDEVISTPGVVARFVEFLKR 137
>sp|Q0V7M0|IMA7_BOVIN Importin subunit alpha-7 OS=Bos taurus GN=KPNA6 PE=2 SV=1
Length = 536
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 58/110 (52%), Gaps = 26/110 (23%)
Query: 177 VELRKNKREETLQKRRNVPL-----------------ADSTDEDDIEKMAQVNLDMLVVE 219
++LRK KRE+ L KRRNV L + +T E I + +VE
Sbjct: 36 IQLRKQKREQQLFKRRNVELINEEAAMFDSLLMDSYVSSTTGESVITRE--------MVE 87
Query: 220 AARKDNPELQLLAVQSARKLLSSDKNPPIEALIHS-GILPVLVECLERSD 268
D+P+LQL Q RKLLS + +PPI+ +I++ G++ VE L+R++
Sbjct: 88 MLFSDDPDLQLATTQKFRKLLSKEPSPPIDEVINTPGVVDRFVEFLKRNE 137
>sp|A2VE08|IMA1_BOVIN Importin subunit alpha-1 OS=Bos taurus GN=KPNA1 PE=2 SV=1
Length = 538
Score = 49.3 bits (116), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 58/105 (55%), Gaps = 15/105 (14%)
Query: 177 VELRKNKREETLQKRRNVPLADSTD-----EDDIEKMAQV-NLDML--------VVEAAR 222
++LRK KREE L KRRNV A+ D AQ+ N++M ++E
Sbjct: 33 LQLRKQKREEQLFKRRNVATAEEETEEEVMSDGGFHEAQINNMEMAPGGVITSDMIEMIF 92
Query: 223 KDNPELQLLAVQSARKLLSSDKNPPIEALIHS-GILPVLVECLER 266
++PE QL A Q RKLLS + NPPI+ +I + G++ VE L+R
Sbjct: 93 SNSPEQQLSATQKFRKLLSKEPNPPIDEVISTPGVVARFVEFLKR 137
>sp|P83953|IMA1_RAT Importin subunit alpha-1 OS=Rattus norvegicus GN=Kpna1 PE=2 SV=1
Length = 538
Score = 48.9 bits (115), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 58/105 (55%), Gaps = 15/105 (14%)
Query: 177 VELRKNKREETLQKRRNVPLADSTD-----EDDIEKMAQV-NLDML--------VVEAAR 222
++LRK KREE L KRRNV A+ D AQ+ N++M + E
Sbjct: 33 LQLRKQKREEQLFKRRNVATAEEETEEEVMSDGGFHEAQINNMEMAPGGVITSDMTEMIF 92
Query: 223 KDNPELQLLAVQSARKLLSSDKNPPIEALIHS-GILPVLVECLER 266
++PE QL A Q RKLLS + NPPI+ +I++ G++ VE L+R
Sbjct: 93 SNSPEQQLSATQKFRKLLSKEPNPPIDEVINTPGVVARFVEFLKR 137
>sp|P52294|IMA1_HUMAN Importin subunit alpha-1 OS=Homo sapiens GN=KPNA1 PE=1 SV=3
Length = 538
Score = 48.5 bits (114), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 57/105 (54%), Gaps = 15/105 (14%)
Query: 177 VELRKNKREETLQKRRNVPLADSTD-----EDDIEKMAQV-NLDML--------VVEAAR 222
++LRK KREE L KRRNV A+ D AQ+ N++M ++E
Sbjct: 33 LQLRKQKREEQLFKRRNVATAEEETEEEVMSDGGFHEAQISNMEMAPGGVITSDMIEMIF 92
Query: 223 KDNPELQLLAVQSARKLLSSDKNPPIEALIHS-GILPVLVECLER 266
+PE QL A Q RKLLS + NPPI+ +I + G++ VE L+R
Sbjct: 93 SKSPEQQLSATQKFRKLLSKEPNPPIDEVISTPGVVARFVEFLKR 137
>sp|Q5R909|IMA1_PONAB Importin subunit alpha-1 OS=Pongo abelii GN=KPNA1 PE=2 SV=1
Length = 538
Score = 48.1 bits (113), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 57/105 (54%), Gaps = 15/105 (14%)
Query: 177 VELRKNKREETLQKRRNVPLADSTD-----EDDIEKMAQV-NLDML--------VVEAAR 222
++LRK KREE L KRRNV A+ D AQ+ N++M ++E
Sbjct: 33 LQLRKQKREEQLFKRRNVATAEEETEEEVMSDGGFHEAQINNMEMAPGGVITSDMIEMIF 92
Query: 223 KDNPELQLLAVQSARKLLSSDKNPPIEALIHS-GILPVLVECLER 266
+PE QL A Q RKLLS + NPPI+ +I + G++ VE L+R
Sbjct: 93 SKSPEQQLSATQKFRKLLSKEPNPPIDEVISTPGVVARFVEFLKR 137
>sp|Q60960|IMA1_MOUSE Importin subunit alpha-1 OS=Mus musculus GN=Kpna1 PE=1 SV=2
Length = 538
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 58/105 (55%), Gaps = 15/105 (14%)
Query: 177 VELRKNKREETLQKRRNVPLADSTD-----EDDIEKMAQV-NLDML--------VVEAAR 222
++LRK KREE L KRRNV A+ D AQ+ N++M + +
Sbjct: 33 LQLRKQKREEQLFKRRNVATAEEETEEEVMSDGGFHEAQINNMEMAPGGVITSDMTDMIF 92
Query: 223 KDNPELQLLAVQSARKLLSSDKNPPIEALIHS-GILPVLVECLER 266
++PE QL A Q RKLLS + NPPI+ +I++ G++ VE L+R
Sbjct: 93 SNSPEQQLSATQKFRKLLSKEPNPPIDEVINTPGVVARFVEFLKR 137
>sp|O35345|IMA7_MOUSE Importin subunit alpha-7 OS=Mus musculus GN=Kpna6 PE=1 SV=2
Length = 536
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 57/110 (51%), Gaps = 26/110 (23%)
Query: 177 VELRKNKREETLQKRRNVPL-----------------ADSTDEDDIEKMAQVNLDMLVVE 219
++LRK KRE+ L KRRNV L + +T E I + +VE
Sbjct: 36 IQLRKQKREQQLFKRRNVELINEEAAMFDSLLMDSYVSSTTGESVITRE--------MVE 87
Query: 220 AARKDNPELQLLAVQSARKLLSSDKNPPIEALIHS-GILPVLVECLERSD 268
D+ +LQL Q RKLLS + +PPI+ +I++ G++ VE L+R++
Sbjct: 88 MLFSDDSDLQLATTQKFRKLLSKEPSPPIDEVINTPGVVDRFVEFLKRNE 137
>sp|Q557F4|IMA1A_DICDI Probable importin subunit alpha-A OS=Dictyostelium discoideum
GN=DDB_G0273149 PE=3 SV=1
Length = 550
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 54/117 (46%), Gaps = 18/117 (15%)
Query: 169 RRRRNEVTVELRKNKREETLQKRRNVPLADSTDEDDI-------EKMAQV---------- 211
RR+R E ++ +RKN REE + KRR + + + I E+ +
Sbjct: 24 RRKREENSIGIRKNAREELMLKRRGIVQPNPSTSYQIIVPPEVQEQFQKYENETMENKIK 83
Query: 212 NLDMLVVEAARKDNPELQLLAVQSARKLLSSDKNPPIEALIHSGILPVLVECLERSD 268
NL LV D + VQ RKLLS PPI+ +I GI+P L + L+ ++
Sbjct: 84 NLPGLVTALNSNDQAYVYSSLVQ-FRKLLSIHAYPPIDQVIECGIIPKLNQLLQCNN 139
>sp|Q5RBV0|IMA7_PONAB Importin subunit alpha-7 OS=Pongo abelii GN=KPNA6 PE=2 SV=1
Length = 536
Score = 42.4 bits (98), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 47/95 (49%), Gaps = 25/95 (26%)
Query: 177 VELRKNKREETLQKRRNVPL-----------------ADSTDEDDIEKMAQVNLDMLVVE 219
++LRK KRE+ L KRRNV L + +T E I + +VE
Sbjct: 36 IQLRKQKREQQLFKRRNVELINEEAAMFDSLLMDSYVSSTTGESVITRE--------MVE 87
Query: 220 AARKDNPELQLLAVQSARKLLSSDKNPPIEALIHS 254
D+ +LQL Q RKLLS + +PPI+ +I++
Sbjct: 88 MLFSDDSDLQLATTQKFRKLLSKEPSPPIDEVINT 122
>sp|O60684|IMA7_HUMAN Importin subunit alpha-7 OS=Homo sapiens GN=KPNA6 PE=1 SV=1
Length = 536
Score = 42.4 bits (98), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 47/95 (49%), Gaps = 25/95 (26%)
Query: 177 VELRKNKREETLQKRRNVPL-----------------ADSTDEDDIEKMAQVNLDMLVVE 219
++LRK KRE+ L KRRNV L + +T E I + +VE
Sbjct: 36 IQLRKQKREQQLFKRRNVELINEEAAMFDSLLMDSYVSSTTGESVITRE--------MVE 87
Query: 220 AARKDNPELQLLAVQSARKLLSSDKNPPIEALIHS 254
D+ +LQL Q RKLLS + +PPI+ +I++
Sbjct: 88 MLFSDDSDLQLATTQKFRKLLSKEPSPPIDEVINT 122
>sp|Q3KRF3|CA131_RAT Uncharacterized protein C1orf131 homolog OS=Rattus norvegicus PE=2
SV=1
Length = 282
Score = 40.8 bits (94), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 50/87 (57%), Gaps = 16/87 (18%)
Query: 64 TANDLVPTLSSRIRNQSKSSTPPVVEVVEF--KAYKRKSKALEDDPADDQLTAKKKDEVV 121
TA L P + N SK +VEVVEF ++ KRK K+ ED PA ++ +KD V+
Sbjct: 102 TAVSLFP-----LENDSK-----LVEVVEFHSRSEKRKPKSEEDKPAKNKTKVLEKDVVI 151
Query: 122 ---DMKKARFEIMKFGMNRMTGREKEK 145
+++KAR E+ +FG+ G+ KE+
Sbjct: 152 QEFNLEKARLEVHRFGITGY-GKGKER 177
>sp|Q7U347|MIAA_BLOFL tRNA dimethylallyltransferase OS=Blochmannia floridanus GN=miaA
PE=3 SV=1
Length = 323
Score = 34.7 bits (78), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 30/136 (22%), Positives = 56/136 (41%), Gaps = 4/136 (2%)
Query: 4 LVDRRDEAMTSSLDDLVPTLSSRIRNQSKSSTLPVVEVVEFKAYKRKSKALEDDPADDQL 63
L+D RD A S+ D I +S +PV+ +K L P Q
Sbjct: 71 LIDIRDPADCYSVSDFYHDAILEINKIIRSGYVPVLVGGTMLYFKTLLTGLYQLPGKSQN 130
Query: 64 TANDLVP----TLSSRIRNQSKSSTPPVVEVVEFKAYKRKSKALEDDPADDQLTAKKKDE 119
NDL+ + N+ K P V + + +KR +ALE + + + K +
Sbjct: 131 IRNDLIYEAQKIGWVNMYNKLKCIDPIVSKTIHCNDHKRIIRALEVFLSSGKTLTELKQK 190
Query: 120 VVDMKKARFEIMKFGM 135
++ + R+++++F +
Sbjct: 191 FLNQQSQRYKVLQFAL 206
>sp|A8MYJ9|IMA2L_HUMAN Importin subunit alpha-2-like protein OS=Homo sapiens PE=2 SV=2
Length = 163
Score = 33.9 bits (76), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 60/125 (48%), Gaps = 26/125 (20%)
Query: 167 EMRRRRNEVTVELRKNKREETLQKRRNV---------PLADSTDED------------DI 205
E RR R EV VELRK K+++ + KRRNV PL ++ +
Sbjct: 26 ETRRHRIEVNVELRKAKKDDQMLKRRNVSSFPDDATSPLQENCNNQTPALRAIGNIVTGT 85
Query: 206 EKMAQVNLD--MLVVEAARKDNPE--LQLLAVQSARKLLSSDKNPPIEALIHSGILPVLV 261
++ QV +D L V + NP+ +Q A + + +S ++ I+ +++ G++P LV
Sbjct: 86 DEQTQVVIDAGALAVFPSLLTNPKTNIQKEATWTMSNITASRQD-QIQQVVNHGLVPFLV 144
Query: 262 ECLER 266
L +
Sbjct: 145 SDLSK 149
>sp|Q8CIL4|CA131_MOUSE Uncharacterized protein C1orf131 homolog OS=Mus musculus PE=1 SV=1
Length = 281
Score = 32.7 bits (73), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 66/135 (48%), Gaps = 29/135 (21%)
Query: 20 VPTLSSRIRNQSKSSTLPVVEVVEFKAYKRKSKALEDDPADDQ----LTANDLVPTLSSR 75
+P S +R Q KS++ +++ + L+ PA TA L P
Sbjct: 62 LPLPGSPVRGQKKSAS---------SFFQKLREELQSAPAAPSEVPVTTAVSLSPP---- 108
Query: 76 IRNQSKSSTPPVVEVVEFKAYKRKSKA--LEDDPADDQLTAKKKD---EVVDMKKARFEI 130
+N SK +VEVVEF++ +K K ED+PA ++ KKD + +++KAR E+
Sbjct: 109 -KNGSK-----LVEVVEFQSKSKKRKLKSDEDEPAKNKTKVVKKDVDIQEFNLEKARLEV 162
Query: 131 MKFGMNRMTGREKEK 145
+FG+ G+ KE+
Sbjct: 163 HRFGITGY-GKGKER 176
>sp|Q22560|IMA1_CAEEL Importin subunit alpha-1 OS=Caenorhabditis elegans GN=ima-1 PE=1
SV=1
Length = 524
Score = 32.3 bits (72), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 27/42 (64%)
Query: 167 EMRRRRNEVTVELRKNKREETLQKRRNVPLADSTDEDDIEKM 208
EMRR+R E V++RKN+R+E ++ R + + S ++ ++
Sbjct: 25 EMRRKRREDEVQIRKNRRDEKFERNRQITVQRSLSHEETSEL 66
>sp|Q03252|LMNB2_HUMAN Lamin-B2 OS=Homo sapiens GN=LMNB2 PE=1 SV=3
Length = 600
Score = 32.0 bits (71), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 34/59 (57%), Gaps = 4/59 (6%)
Query: 139 TGREKEKTKDIIAIELGKVKHRLIEVDKEMRRRRNEVTVELRKNKREETLQKRRNVPLA 197
T RE+ + + IE+GK++ L EV+K ++R E+TV + K E+L R V LA
Sbjct: 90 TARERAR----LQIEIGKLRAELDEVNKSAKKREGELTVAQGRVKDLESLFHRSEVELA 144
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.312 0.129 0.337
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 90,360,146
Number of Sequences: 539616
Number of extensions: 3561109
Number of successful extensions: 13504
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 56
Number of HSP's successfully gapped in prelim test: 328
Number of HSP's that attempted gapping in prelim test: 13122
Number of HSP's gapped (non-prelim): 638
length of query: 269
length of database: 191,569,459
effective HSP length: 115
effective length of query: 154
effective length of database: 129,513,619
effective search space: 19945097326
effective search space used: 19945097326
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 60 (27.7 bits)