Your job contains 1 sequence.
>psy12603
DIGDNVITIPEVVNEVTSKRQIRRLVVLPYDLQIKEADPDSISFVTEFSKKTGDYPSLSS
TDIKVIALTYELHKQHIGVDSINTEPISRQISYINHSVLTDKEVLAGFYSPSRGCTFNVD
GGYLEGLCRGFKNGILKQTDYLNLVQCESLEELEDHTPEVLQKIDHDEEEHSDDSGNEDD
DDGGEWITPSNLKQAQRTMDARQYEEKPLVVSCVTTDFAMQNVLKQMGLNVVALDGRLIR
ELRTFILRCYACYKTTSIMTKVFCPKCGYKTLKRVAVSVDEQGKQKIHINLKRPLTARGK
KFSLPTFKGGKHANNPIVAEDQPVPDQRPTRLGRTKTNALDPDYIAGMSPFAVHDINSKS
AMLGIRNNGKNNEVKYWMYKNPNAVKRKAKK
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy12603
(391 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0030177 - symbol:CG2972 species:7227 "Drosophila m... 627 2.4e-87 2
RGD|735222 - symbol:Nob1 "NIN1/RPN12 binding protein 1 ho... 499 1.4e-74 2
MGI|MGI:1914869 - symbol:Nob1 "NIN1/RPN12 binding protein... 499 1.8e-74 2
UNIPROTKB|Q9ULX3 - symbol:NOB1 "RNA-binding protein NOB1"... 496 1.6e-73 2
UNIPROTKB|Q3T042 - symbol:NOB1 "RNA-binding protein NOB1"... 726 8.6e-72 1
WB|WBGene00021843 - symbol:Y54E10BR.4 species:6239 "Caeno... 463 1.3e-57 2
POMBASE|SPAC1486.09 - symbol:SPAC1486.09 "ribosome biogen... 325 9.5e-42 2
TAIR|locus:2163071 - symbol:NOB1 species:3702 "Arabidopsi... 260 2.0e-34 2
ASPGD|ASPL0000014547 - symbol:AN8253 species:162425 "Emer... 263 2.4e-32 2
UNIPROTKB|G4MQ79 - symbol:MGG_09254 "20S-pre-rRNA D-site ... 246 2.1e-29 2
CGD|CAL0000302 - symbol:HBR3 species:5476 "Candida albica... 217 1.6e-23 2
SGD|S000005582 - symbol:NOB1 "Protein involved in proteas... 156 3.9e-15 3
FB|FBgn0028665 - symbol:VhaAC39-1 "Vacuolar H[+] ATPase A... 182 1.5e-11 1
UNIPROTKB|H3BQB4 - symbol:ATP6V0D1 "V-type proton ATPase ... 156 1.0e-10 1
UNIPROTKB|H3BSG7 - symbol:ATP6V0D1 "V-type proton ATPase ... 156 1.0e-10 1
UNIPROTKB|H3BTB5 - symbol:ATP6V0D1 "V-type proton ATPase ... 149 6.0e-10 1
UNIPROTKB|H3BUQ0 - symbol:ATP6V0D1 "V-type proton ATPase ... 145 1.7e-09 1
ZFIN|ZDB-GENE-030131-1531 - symbol:atp6v0d1 "ATPase, H+ t... 163 2.3e-09 1
UNIPROTKB|E1BVF8 - symbol:LOC100857345 "Uncharacterized p... 162 3.0e-09 1
UNIPROTKB|P61420 - symbol:ATP6V0D1 "V-type proton ATPase ... 156 1.4e-08 1
UNIPROTKB|E2RJQ8 - symbol:ATP6V0D1 "Uncharacterized prote... 156 1.4e-08 1
UNIPROTKB|P61421 - symbol:ATP6V0D1 "V-type proton ATPase ... 156 1.4e-08 1
UNIPROTKB|F2Z5H6 - symbol:ATP6V0D1 "Uncharacterized prote... 156 1.4e-08 1
MGI|MGI:1201778 - symbol:Atp6v0d1 "ATPase, H+ transportin... 156 1.4e-08 1
RGD|1306159 - symbol:Atp6v0d1 "ATPase, H+ transporting, l... 156 1.4e-08 1
UNIPROTKB|F5GYQ1 - symbol:ATP6V0D1 "V-type proton ATPase ... 156 1.9e-08 1
UNIPROTKB|J3QL14 - symbol:ATP6V0D1 "V-type proton ATPase ... 145 5.8e-08 1
UNIPROTKB|E5RIR3 - symbol:ATP6V0D2 "V-type proton ATPase ... 130 7.2e-08 1
UNIPROTKB|Q5ZHL0 - symbol:ATP6V0D2 "V-type proton ATPase ... 148 1.2e-07 1
UNIPROTKB|F1RXD2 - symbol:ATP6V0D2 "Uncharacterized prote... 148 1.2e-07 1
FB|FBgn0039058 - symbol:VhaAC39-2 "Vacuolar H[+] ATPase A... 143 4.3e-07 1
WB|WBGene00016258 - symbol:vha-16 species:6239 "Caenorhab... 142 5.4e-07 1
UNIPROTKB|Q8N8Y2 - symbol:ATP6V0D2 "V-type proton ATPase ... 142 5.5e-07 1
UNIPROTKB|Q5R7B7 - symbol:ATP6V0D2 "V-type proton ATPase ... 142 5.5e-07 1
MGI|MGI:1924415 - symbol:Atp6v0d2 "ATPase, H+ transportin... 141 7.1e-07 1
RGD|1306900 - symbol:Atp6v0d2 "ATPase, H+ transporting, l... 141 7.1e-07 1
UNIPROTKB|Q2KJB6 - symbol:ATP6V0D2 "V-type proton ATPase ... 139 1.2e-06 1
UNIPROTKB|E2RTF2 - symbol:ATP6V0D2 "Uncharacterized prote... 139 1.2e-06 1
DICTYBASE|DDB_G0273657 - symbol:vatD-2 "vacuolar ATPase s... 135 3.5e-06 1
DICTYBASE|DDB_G0273071 - symbol:vatD-1 "vacuolar ATPase s... 135 3.5e-06 1
SGD|S000004439 - symbol:VMA6 "Subunit d of the V0 integra... 132 7.2e-06 1
CGD|CAL0004857 - symbol:orf19.364 species:5476 "Candida a... 131 9.5e-06 1
TAIR|locus:2095482 - symbol:AT3G28710 species:3702 "Arabi... 123 7.6e-05 1
TAIR|locus:2095492 - symbol:AT3G28715 species:3702 "Arabi... 123 7.6e-05 1
UNIPROTKB|E5RHJ7 - symbol:ATP6V0D2 "V-type proton ATPase ... 97 0.00028 1
ASPGD|ASPL0000034546 - symbol:AN3168 species:162425 "Emer... 114 0.00082 1
>FB|FBgn0030177 [details] [associations]
symbol:CG2972 species:7227 "Drosophila melanogaster"
[GO:0022008 "neurogenesis" evidence=IMP] GO:GO:0022008
EMBL:AE014298 eggNOG:COG1439 KO:K11883 InterPro:IPR017117
InterPro:IPR014881 Pfam:PF08772 PIRSF:PIRSF037125 OMA:KEPLPEY
GeneTree:ENSGT00390000015857 EMBL:AY119594 RefSeq:NP_572603.1
UniGene:Dm.11186 SMR:Q9W2Y4 IntAct:Q9W2Y4 MINT:MINT-874469
STRING:Q9W2Y4 EnsemblMetazoa:FBtr0071430 GeneID:31943
KEGG:dme:Dmel_CG2972 UCSC:CG2972-RA FlyBase:FBgn0030177
InParanoid:Q9W2Y4 OrthoDB:EOG42548K GenomeRNAi:31943 NextBio:776063
Uniprot:Q9W2Y4
Length = 472
Score = 627 (225.8 bits), Expect = 2.4e-87, Sum P(2) = 2.4e-87
Identities = 121/206 (58%), Positives = 159/206 (77%)
Query: 186 WITPSNLKQAQRTMDAR-QYEEKPLVVSCVTTDFAMQNVLKQMGLNVVALDGRLIRELRT 244
WIT SN+K+A++ ++ + + +E P V+C+TTD+A+QNVLKQ+ L++ AL+GR+I++LRT
Sbjct: 266 WITHSNIKKAKKALEGKVETDEVP-PVACMTTDYALQNVLKQLNLHLAALNGRIIKQLRT 324
Query: 245 FILRCYACYKTTSIMTKVFCPKCGYKTLKRVAVSVDEQGKQKIHINLKRPLTARGKKFSL 304
+ILRCYACYKTTSIMTKVFCP CG KTLKRVAVS+DE G+Q IHIN +RPLT + K SL
Sbjct: 325 YILRCYACYKTTSIMTKVFCPNCGNKTLKRVAVSLDENGRQVIHINTRRPLTNKYKNQSL 384
Query: 305 PTFKGGKHANNPIVAEDQPVPDQRPTRLGRTKTNALDPDYIAGMSPFAVHDINSKSAMLG 364
P F+GGKH+ NPI+ EDQP+P Q P+R+ +TKTNALD DY AG SPF + D++SKSAML
Sbjct: 385 PRFQGGKHSRNPILFEDQPMPRQMPSRVAKTKTNALDQDYTAGFSPFVLRDVDSKSAML- 443
Query: 365 IRNNGKNNEVKYWMYKNPNAVKRKAK 390
R+ G +K W N R+ K
Sbjct: 444 -RSKGN---LKEWARNNNFEEDRRRK 465
Score = 265 (98.3 bits), Expect = 2.4e-87, Sum P(2) = 2.4e-87
Identities = 55/115 (47%), Positives = 75/115 (65%)
Query: 1 DIGDNVITIPEVVNEVTSKRQIRRLVVLPYDLQIKEADPDSISFVTEFSKKTGDYPSLSS 60
+ + V+T+P+VV EV +KRQIRRL VLP+DLQ++E P+SI EF+KKTGDY SLS
Sbjct: 26 EYAEQVLTVPDVVAEVRNKRQIRRLCVLPFDLQVREPRPESIKHCVEFAKKTGDYASLSG 85
Query: 61 TDIKVIALTYELHKQHIGVDSINTEPISRQI--SYINHSVLTD--KEVLAGFYSP 111
D+KVI+LTYEL ++G D + EP+ Q S + D + L G+Y P
Sbjct: 86 IDLKVISLTYELEADNVGTDHLRQEPVMAQTIASKDKPEEMQDANNKRLVGWYMP 140
>RGD|735222 [details] [associations]
symbol:Nob1 "NIN1/RPN12 binding protein 1 homolog (S.
cerevisiae)" species:10116 "Rattus norvegicus" [GO:0005634
"nucleus" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR006596 RGD:735222 GO:GO:0005634
GO:GO:0046872 SMART:SM00670 CTD:28987 eggNOG:COG1439
HOGENOM:HOG000159692 HOVERGEN:HBG057385 KO:K11883 OrthoDB:EOG4S4PGJ
InterPro:IPR017117 InterPro:IPR014881 Pfam:PF08772
PIRSF:PIRSF037125 OMA:KEPLPEY GeneTree:ENSGT00390000015857
EMBL:AY341886 EMBL:BC126076 IPI:IPI00396864 RefSeq:NP_954517.1
UniGene:Rn.102586 ProteinModelPortal:Q6VEU1 SMR:Q6VEU1
STRING:Q6VEU1 Ensembl:ENSRNOT00000034386 GeneID:291996
KEGG:rno:291996 UCSC:RGD:735222 InParanoid:Q6VEU1 NextBio:633580
ArrayExpress:Q6VEU1 Genevestigator:Q6VEU1
GermOnline:ENSRNOG00000021890 Uniprot:Q6VEU1
Length = 410
Score = 499 (180.7 bits), Expect = 1.4e-74, Sum P(2) = 1.4e-74
Identities = 104/208 (50%), Positives = 144/208 (69%)
Query: 186 WITPSNLKQAQRTMDARQYE-EKPLVVSCVTTDFAMQNVLKQMGLNVVALDGRLIRELRT 244
WITPSN+KQ Q ++ Q + K + V CVTTDFAMQNVL QMGL+V+A++G L+RE R+
Sbjct: 206 WITPSNIKQIQH--ESEQCDIPKDVQVGCVTTDFAMQNVLLQMGLHVLAVNGMLVREARS 263
Query: 245 FILRCYACYKTTSIMTKVFCPKCGYKTLKRVAVSVDEQGKQKIHINLK-RPLTARGKKFS 303
+ILRC+ C+KTTS M +VFC CG KTLK+V+V++++ G +H + + L RG ++S
Sbjct: 264 YILRCHGCFKTTSDMNRVFCGHCGNKTLKKVSVTINDDGTLHMHFSRNPKVLNPRGLRYS 323
Query: 304 LPTFKGGKHANNPIVAEDQPVPDQRPTRLGRTKTNALDPDYIAGMSPFAVHDINSKSAML 363
LPT KGGK+A NP + EDQ P R + R KTN PDYIAG+SPFA +DI+S+SA+L
Sbjct: 324 LPTPKGGKYAVNPHLTEDQRFPQLRLSHKARQKTNVFAPDYIAGVSPFAENDISSRSAIL 383
Query: 364 GIRNNGKNNEVKYWMYKNPNAVKRKAKK 391
+R++ + NPNA ++K K
Sbjct: 384 QVRDSMLGAGRRRL---NPNASRKKFVK 408
Score = 272 (100.8 bits), Expect = 1.4e-74, Sum P(2) = 1.4e-74
Identities = 58/114 (50%), Positives = 77/114 (67%)
Query: 1 DIGDNVITIPEVVNEVTSKRQIRRLVVLPYDLQIKEADPDSISFVTEFSKKTGDYPSLSS 60
DIG N+ TI EVV E+ K RRL VLPY+L+ KE P+ + VTEFSKKTGDYPSLS+
Sbjct: 22 DIGKNIYTIREVVREIRDKATRRRLAVLPYELRFKEPFPEYVRLVTEFSKKTGDYPSLSA 81
Query: 61 TDIKVIALTYELHKQHIGVDSINTEPISRQISY-INHSVLTDKEVLAGFYSPSR 113
TDI+V+ALTY+L + +GV + EP ++S I H T + +GF+ PS+
Sbjct: 82 TDIQVLALTYQLEAEFVGVSHLKKEPEKVKVSSSIQHPE-TPLHI-SGFHLPSK 133
>MGI|MGI:1914869 [details] [associations]
symbol:Nob1 "NIN1/RPN12 binding protein 1 homolog (S.
cerevisiae)" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=ISA] [GO:0005730 "nucleolus" evidence=ISA] [GO:0005737
"cytoplasm" evidence=ISA] [GO:0030490 "maturation of SSU-rRNA"
evidence=ISA] [GO:0042274 "ribosomal small subunit biogenesis"
evidence=ISA] [GO:0046872 "metal ion binding" evidence=IEA]
MGI:MGI:1914869 InterPro:IPR006596 GO:GO:0005737 GO:GO:0005730
GO:GO:0046872 GO:GO:0030490 SMART:SM00670 CTD:28987 eggNOG:COG1439
HOGENOM:HOG000159692 HOVERGEN:HBG057385 KO:K11883 OrthoDB:EOG4S4PGJ
InterPro:IPR017117 InterPro:IPR014881 Pfam:PF08772
PIRSF:PIRSF037125 OMA:KEPLPEY EMBL:AK075755 EMBL:AK021194
EMBL:BC054835 EMBL:BC103793 IPI:IPI00225974 RefSeq:NP_080553.1
UniGene:Mm.334793 PDB:2CON PDBsum:2CON ProteinModelPortal:Q8BW10
SMR:Q8BW10 IntAct:Q8BW10 STRING:Q8BW10 PhosphoSite:Q8BW10
PaxDb:Q8BW10 PRIDE:Q8BW10 Ensembl:ENSMUST00000003946 GeneID:67619
KEGG:mmu:67619 GeneTree:ENSGT00390000015857 InParanoid:Q8BW10
ChiTaRS:NOB1 EvolutionaryTrace:Q8BW10 NextBio:325057 Bgee:Q8BW10
Genevestigator:Q8BW10 GermOnline:ENSMUSG00000003848 Uniprot:Q8BW10
Length = 403
Score = 499 (180.7 bits), Expect = 1.8e-74, Sum P(2) = 1.8e-74
Identities = 103/207 (49%), Positives = 145/207 (70%)
Query: 186 WITPSNLKQAQRTMDARQYEEKPLVVSCVTTDFAMQNVLKQMGLNVVALDGRLIRELRTF 245
WITPSN+KQ Q+ ++ E + V CVTTDFAMQNVL QMGL+V+A++G L+RE R++
Sbjct: 199 WITPSNIKQIQQELEQCDTPED-VQVGCVTTDFAMQNVLLQMGLHVLAVNGMLVREARSY 257
Query: 246 ILRCYACYKTTSIMTKVFCPKCGYKTLKRVAVSVDEQGKQKIHINLK-RPLTARGKKFSL 304
ILRC+ C+KTTS M +VFC CG KTLK+V+V++++ G +H + + L RG ++SL
Sbjct: 258 ILRCHGCFKTTSDMNRVFCGHCGNKTLKKVSVTINDDGTLHMHFSRNPKVLNPRGLRYSL 317
Query: 305 PTFKGGKHANNPIVAEDQPVPDQRPTRLGRTKTNALDPDYIAGMSPFAVHDINSKSAMLG 364
PT KGGK+A NP + EDQ P R ++ R KT+ PDYIAG+SPFA +DI+S+SA+L
Sbjct: 318 PTPKGGKYAINPHLTEDQRFPQLRLSQKARQKTDVFAPDYIAGVSPFAENDISSRSAILQ 377
Query: 365 IRNNGKNNEVKYWMYKNPNAVKRKAKK 391
+R+ G + + NPNA ++K K
Sbjct: 378 VRD-GMLGAGRRRL--NPNASRKKFVK 401
Score = 271 (100.5 bits), Expect = 1.8e-74, Sum P(2) = 1.8e-74
Identities = 61/126 (48%), Positives = 80/126 (63%)
Query: 1 DIGDNVITIPEVVNEVTSKRQIRRLVVLPYDLQIKEADPDSISFVTEFSKKTGDYPSLSS 60
DIG N+ TI EVV E+ K RRL VLPY L+ KE P+ + VTEFSKKTGDYPSLS+
Sbjct: 22 DIGKNIYTIREVVREIRDKATRRRLAVLPYQLRFKEPLPEYVRLVTEFSKKTGDYPSLSA 81
Query: 61 TDIKVIALTYELHKQHIGVDSINTEPISRQISY-INHSVLTDKEVLAGFYSPSRGCTFN- 118
TDI+V+ALTY+L + +GV + EP ++S I H T + +GF+ PS+
Sbjct: 82 TDIQVLALTYQLEAEFVGVSHLKKEPEKAKVSSSIQHPE-TALHI-SGFHLPSKSKPLQE 139
Query: 119 -VDGGY 123
VD G+
Sbjct: 140 AVDRGH 145
>UNIPROTKB|Q9ULX3 [details] [associations]
symbol:NOB1 "RNA-binding protein NOB1" species:9606 "Homo
sapiens" [GO:0046872 "metal ion binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR006596 GO:GO:0005634
GO:GO:0046872 SMART:SM00670 CleanEx:HS_ART4 CTD:28987
eggNOG:COG1439 HOGENOM:HOG000159692 HOVERGEN:HBG057385 KO:K11883
OrthoDB:EOG4S4PGJ InterPro:IPR017117 InterPro:IPR014881
Pfam:PF08772 PIRSF:PIRSF037125 EMBL:AB026125 EMBL:AY487344
EMBL:AK001028 EMBL:BC000050 EMBL:BC064630 EMBL:AF190161
IPI:IPI00022373 PIR:A61382 RefSeq:NP_054781.1 UniGene:Hs.271695
ProteinModelPortal:Q9ULX3 SMR:Q9ULX3 IntAct:Q9ULX3 STRING:Q9ULX3
DMDM:74753398 PaxDb:Q9ULX3 PRIDE:Q9ULX3 DNASU:28987
Ensembl:ENST00000268802 GeneID:28987 KEGG:hsa:28987 UCSC:uc002exs.3
GeneCards:GC16M069775 HGNC:HGNC:29540 HPA:HPA049430 MIM:613586
neXtProt:NX_Q9ULX3 PharmGKB:PA143485585 InParanoid:Q9ULX3
OMA:KEPLPEY GenomeRNAi:28987 NextBio:51895 Bgee:Q9ULX3
CleanEx:HS_NOB1 Genevestigator:Q9ULX3 GermOnline:ENSG00000141101
Uniprot:Q9ULX3
Length = 412
Score = 496 (179.7 bits), Expect = 1.6e-73, Sum P(2) = 1.6e-73
Identities = 103/207 (49%), Positives = 142/207 (68%)
Query: 186 WITPSNLKQAQRTMDARQYEEKPLVVSCVTTDFAMQNVLKQMGLNVVALDGRLIRELRTF 245
WITPSN+KQ Q+ ++ E + V C+TTDFAMQNVL QMGL+V+A++G LIRE R++
Sbjct: 208 WITPSNIKQIQQELEQCDVPED-VRVGCLTTDFAMQNVLLQMGLHVLAVNGMLIREARSY 266
Query: 246 ILRCYACYKTTSIMTKVFCPKCGYKTLKRVAVSVDEQGKQKIHINLK-RPLTARGKKFSL 304
ILRC+ C+KTTS M++VFC CG KTLK+V+V+V + G +H + + L RG ++SL
Sbjct: 267 ILRCHGCFKTTSDMSRVFCSHCGNKTLKKVSVTVSDDGTLHMHFSRNPKVLNPRGLRYSL 326
Query: 305 PTFKGGKHANNPIVAEDQPVPDQRPTRLGRTKTNALDPDYIAGMSPFAVHDINSKSAMLG 364
PT KGGK+A NP + EDQ P R ++ R KTN PDYIAG+SPF +DI+S+SA L
Sbjct: 327 PTPKGGKYAINPHLTEDQRFPQLRLSQKARQKTNVFAPDYIAGVSPFVENDISSRSATLQ 386
Query: 365 IRNNGKNNEVKYWMYKNPNAVKRKAKK 391
+R++ + NPNA ++K K
Sbjct: 387 VRDSTLGAGRRRL---NPNASRKKFVK 410
Score = 265 (98.3 bits), Expect = 1.6e-73, Sum P(2) = 1.6e-73
Identities = 57/112 (50%), Positives = 75/112 (66%)
Query: 1 DIGDNVITIPEVVNEVTSKRQIRRLVVLPYDLQIKEADPDSISFVTEFSKKTGDYPSLSS 60
DIG N+ TI EVV E+ K RRL VLPY+L+ KE P+ + VTEFSKKTGDYPSLS+
Sbjct: 22 DIGKNIYTIREVVTEIRDKATRRRLAVLPYELRFKEPLPEYVRLVTEFSKKTGDYPSLSA 81
Query: 61 TDIKVIALTYELHKQHIGVDSINTEPISRQISY-INHSVLTDKEVLAGFYSP 111
TDI+V+ALTY+L + +GV + EP ++S I H T + +GF+ P
Sbjct: 82 TDIQVLALTYQLEAEFVGVSHLKQEPQKVKVSSSIQHPE-TPLHI-SGFHLP 131
>UNIPROTKB|Q3T042 [details] [associations]
symbol:NOB1 "RNA-binding protein NOB1" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] InterPro:IPR006596 GO:GO:0005634
GO:GO:0046872 SMART:SM00670 EMBL:AY336977 EMBL:BC102577
IPI:IPI00690132 RefSeq:NP_898906.1 UniGene:Bt.49199
ProteinModelPortal:Q3T042 SMR:Q3T042 STRING:Q3T042 PRIDE:Q3T042
GeneID:360191 KEGG:bta:360191 CTD:28987 eggNOG:COG1439
HOGENOM:HOG000159692 HOVERGEN:HBG057385 InParanoid:Q3T042 KO:K11883
OrthoDB:EOG4S4PGJ NextBio:20812791 InterPro:IPR017117
InterPro:IPR014881 Pfam:PF08772 PIRSF:PIRSF037125 Uniprot:Q3T042
Length = 413
Score = 726 (260.6 bits), Expect = 8.6e-72, P = 8.6e-72
Identities = 170/396 (42%), Positives = 236/396 (59%)
Query: 1 DIGDNVITIPEVVNEVTSKRQIRRLVVLPYDLQIKEADPDSISFVTEFSKKTGDYPSLSS 60
DIG N+ TI V++E+ K RRL VLPY+L+ KE P+ + VTEFSKKTGDYPSLS+
Sbjct: 22 DIGKNIYTIRNVISEIRDKATRRRLAVLPYELRFKEPFPEYVRLVTEFSKKTGDYPSLSA 81
Query: 61 TDIKVIALTYELHKQHIGVDSINTEPISRQISY-INHSVLTDKEVLAGFYSPSRGCT--F 117
TDI+V+ALTY+L + +GV + EP ++S I H T V +GF+ PS+
Sbjct: 82 TDIQVLALTYQLEAEFVGVSHLKQEPEKVKVSSSIQHPE-TPLHV-SGFHLPSKPKPPRE 139
Query: 118 NVDGGYLEGLCRGFK-NGILKQTDYLNLVQCESLEELEDHTPEVLQKIXXXXXXXXXXXX 176
V+ + + + + + L + CE E L D +V +
Sbjct: 140 TVEHRHPASEPEDLEFSSFMFWRNPLPNIDCELQELLMDGGEDVPNEEEDEENGLDERQD 199
Query: 177 XXXXXXXXXWITPSNLKQAQRTMDARQYEEKPLVVSCVTTDFAMQNVLKQMGLNVVALDG 236
WITPSN+KQ Q+ M K + V CVTTDFAMQNVL QMGL+V+A++G
Sbjct: 200 EDSDDDGGGWITPSNIKQIQQEMKQCAVP-KDVRVGCVTTDFAMQNVLLQMGLHVLAVNG 258
Query: 237 RLIRELRTFILRCYACYKTTSIMTKVFCPKCGYKTLKRVAVSVDEQGKQKIHINLK-RPL 295
LIRE R++ILRC+ C+KTTS M++VFC CG KTLK+V+V+V + G +H + + L
Sbjct: 259 MLIREARSYILRCHGCFKTTSDMSRVFCAHCGNKTLKKVSVTVSDDGTLHMHFSRNPKVL 318
Query: 296 TARGKKFSLPTFKGGKHANNPIVAEDQPVPDQRPTRLGRTKTNALDPDYIAGMSPFAVHD 355
RG ++SLPT KGGK+A NP + EDQ P R +R R KT+ PDY+AG+SPFA +D
Sbjct: 319 NPRGLRYSLPTPKGGKYAINPHLTEDQRFPQLRLSRKARQKTDVFAPDYVAGVSPFAEND 378
Query: 356 INSKSAMLGIRNNGKNNEVKYWMYKNPNAVKRKAKK 391
I+S+SA L +R++ + NPNA ++K K
Sbjct: 379 ISSRSATLQVRDSTLGAGRRRL---NPNASRKKFVK 411
>WB|WBGene00021843 [details] [associations]
symbol:Y54E10BR.4 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0040035 "hermaphrodite genitalia development"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0071688 "striated muscle myosin thick filament
assembly" evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA]
GO:GO:0008340 GO:GO:0006898 GO:GO:0040007 GO:GO:0040010
GO:GO:0002119 GO:GO:0071688 GO:GO:0040035 eggNOG:COG1439
HOGENOM:HOG000159692 KO:K11883 InterPro:IPR017117
InterPro:IPR014881 Pfam:PF08772 PIRSF:PIRSF037125
GeneTree:ENSGT00390000015857 OMA:TTSVMTK EMBL:FO081636
RefSeq:NP_491090.1 ProteinModelPortal:Q9N3D3 SMR:Q9N3D3
STRING:Q9N3D3 PaxDb:Q9N3D3 EnsemblMetazoa:Y54E10BR.4 GeneID:171874
KEGG:cel:CELE_Y54E10BR.4 UCSC:Y54E10BR.4 CTD:171874
WormBase:Y54E10BR.4 InParanoid:Q9N3D3 NextBio:873055 Uniprot:Q9N3D3
Length = 364
Score = 463 (168.0 bits), Expect = 1.3e-57, Sum P(2) = 1.3e-57
Identities = 96/206 (46%), Positives = 134/206 (65%)
Query: 186 WITPSNLKQAQRTMDARQYEEKPLVVSCVTTDFAMQNVLKQMGLNVVALDGRLIRELRTF 245
WIT N+++ + + A + EE ++V C+TTDFA+QNVL M L++V+L G IR+L++F
Sbjct: 172 WITQDNIEETLKKLGAFEIEEN-MLVGCLTTDFALQNVLLAMNLSLVSLSGYRIRKLKSF 230
Query: 246 ILRCYACYKTTSIMTKVFCPKCGYKTLKRVAVSVDEQGKQKIHINLKRPLTARGKKFSLP 305
+LRC C+ TTS+MTK FCP CG+KTL + AVSVDE G Q++HIN R RG ++L
Sbjct: 231 VLRCRTCFSTTSVMTKEFCPACGHKTLHKCAVSVDEDGNQQLHINWNRMANRRGLVYTLA 290
Query: 306 TFKGGKHANNPIVAEDQPVPDQRPTRLGRTKTNALDPDYIAGMSPFAVHDINSKSAMLGI 365
KGGKHA N + EDQP+P R ++ +DP +A PF+VHD+ S+SAMLG+
Sbjct: 291 NPKGGKHATNERLFEDQPMPHMRMAKIH------MDP--LAD-GPFSVHDVTSRSAMLGV 341
Query: 366 RNNGKNNEVKYWMYKNPNAVKRKAKK 391
R NN K +NPN KR ++
Sbjct: 342 RTI--NNRAK--QNRNPNESKRGGRR 363
Score = 147 (56.8 bits), Expect = 1.3e-57, Sum P(2) = 1.3e-57
Identities = 27/81 (33%), Positives = 51/81 (62%)
Query: 2 IGDNVITIPEVVNEVTSKRQIRRLVVLPYDLQIKEADPDSISFVTEFSKKTGDYPSLSST 61
+ D+ P++++E+ S + LP+++ ++E ++ V + SK TGD+ SLS
Sbjct: 27 LADHYYAPPQILDELRSSAARKLWNTLPFEVTLREPTQTALRAVIDASKTTGDFQSLSMV 86
Query: 62 DIKVIALTYELHKQHIGVDSI 82
DIK+IALTY+LH+Q++ + +
Sbjct: 87 DIKMIALTYDLHRQYVAENDV 107
>POMBASE|SPAC1486.09 [details] [associations]
symbol:SPAC1486.09 "ribosome biogenesis protein Nob1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=ISO] [GO:0004521 "endoribonuclease activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0030688 "preribosome, small subunit precursor" evidence=ISO]
[GO:0042274 "ribosomal small subunit biogenesis" evidence=ISO]
[GO:0043248 "proteasome assembly" evidence=ISO] [GO:0046872 "metal
ion binding" evidence=IEA] PomBase:SPAC1486.09 InterPro:IPR006596
GO:GO:0005829 GO:GO:0005634 EMBL:CU329670 GO:GO:0005730
GenomeReviews:CU329670_GR GO:GO:0046872 GO:GO:0003723 GO:GO:0043248
GO:GO:0004521 GO:GO:0042274 SMART:SM00670 GO:GO:0030688
eggNOG:COG1439 HOGENOM:HOG000159692 KO:K11883 InterPro:IPR017117
InterPro:IPR014881 Pfam:PF08772 PIRSF:PIRSF037125 PIR:T50078
RefSeq:NP_594097.1 HSSP:Q8BW10 ProteinModelPortal:Q9UTK0
STRING:Q9UTK0 EnsemblFungi:SPAC1486.09.1 GeneID:2541448
KEGG:spo:SPAC1486.09 OMA:TTSVMTK OrthoDB:EOG4CRQ7R NextBio:20802550
Uniprot:Q9UTK0
Length = 388
Score = 325 (119.5 bits), Expect = 9.5e-42, Sum P(2) = 9.5e-42
Identities = 74/198 (37%), Positives = 109/198 (55%)
Query: 186 WITPSNL--KQAQRTMDARQYEEKPLVVSCVTTDFAMQNVLKQMGLNVVALDGRLIRELR 243
WITPSN+ K+A+ + + K L V+C TTDF+MQNVL Q+GLN+V+ DG I+ ++
Sbjct: 191 WITPSNIRKKKAEDGVGESLVQPKHLKVACATTDFSMQNVLLQIGLNLVSSDGFKIQNVK 250
Query: 244 TFILRCYACYKTTSIMTKVFCPKCGYKTLKRVAVSVDEQGKQKIHINLKRPLTARGKKFS 303
F+LRC+ CY M K FCP CG TL + S++ +G+ ++H+ RG K+S
Sbjct: 251 RFVLRCHGCYTVVKDMEKKFCPSCGGNTLIKTTCSINSKGEFQVHLKKNFEWKTRGTKYS 310
Query: 304 LPT----FKGGKHANNPIVAEDQPVPDQRPTRLGRTKT-NALDPDYIAGMSPFAVHDINS 358
LP GK NP++ EDQP + R+ R K + +D DY+ P + +
Sbjct: 311 LPKPVHGTSNGKGKKNPVLREDQPEYQRAVRRMQRKKEIDLMDEDYL----PSLLTGVTK 366
Query: 359 KSAMLGIRNNGKN-NEVK 375
+ I KN NEV+
Sbjct: 367 DRMYVQIGAGRKNPNEVR 384
Score = 134 (52.2 bits), Expect = 9.5e-42, Sum P(2) = 9.5e-42
Identities = 33/78 (42%), Positives = 48/78 (61%)
Query: 4 DNVITIPEVVNEVTSKRQIRRLVVLPYDLQIKEAD-PDSISFVTEFSKKTGDYPSLSSTD 62
++ TIP V+ E+ + R+ L D I+ P+ I V+EF+K+TGDY SLS TD
Sbjct: 27 ESFYTIPRVIAEIRDETS-RKNFELWGDQVIQRVPKPEFIKKVSEFAKQTGDYSSLSVTD 85
Query: 63 IKVIALTYELHKQHIGVD 80
I+++ALTYEL + G D
Sbjct: 86 IQILALTYELEVEFNGGD 103
>TAIR|locus:2163071 [details] [associations]
symbol:NOB1 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0006606 "protein import
into nucleus" evidence=RCA] [GO:0000469 "cleavage involved in rRNA
processing" evidence=IDA] [GO:0004521 "endoribonuclease activity"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006364
"rRNA processing" evidence=IMP] [GO:0009553 "embryo sac
development" evidence=IMP] [GO:0009555 "pollen development"
evidence=IMP] EMBL:CP002688 EMBL:AB010072 KO:K11883
InterPro:IPR017117 InterPro:IPR014881 Pfam:PF08772
PIRSF:PIRSF037125 OMA:KEPLPEY IPI:IPI00524371 RefSeq:NP_198935.1
UniGene:At.51074 ProteinModelPortal:Q9FLL1 SMR:Q9FLL1 STRING:Q9FLL1
PRIDE:Q9FLL1 EnsemblPlants:AT5G41190.1 GeneID:834121
KEGG:ath:AT5G41190 TAIR:At5g41190 InParanoid:Q9FLL1
PhylomeDB:Q9FLL1 ProtClustDB:CLSN2686224 Genevestigator:Q9FLL1
Uniprot:Q9FLL1
Length = 602
Score = 260 (96.6 bits), Expect = 2.0e-34, Sum P(2) = 2.0e-34
Identities = 64/157 (40%), Positives = 93/157 (59%)
Query: 211 VSCVTTDFAMQNVLKQMGLNVVALDGRLIRELRTFILRCYACYKTTSIMTKVFCPKCGYK 270
V+C+T D+AMQNV+ QMGL ++A G IR+L +IL+C+ACY T + ++FCPKCG
Sbjct: 424 VACITGDYAMQNVILQMGLRLLAPGGMQIRQLHRWILKCHACYTVTPEIGRIFCPKCGNG 483
Query: 271 -TLKRVAVSVDEQGKQKIHINLKRPLTARGKKFSLPTFKGGKHA--NNPIVAEDQPVPDQ 327
TL++VAV++ G I K +T RG ++S+P KGG+ A N I+ EDQ +P Q
Sbjct: 484 GTLRKVAVTIGANGA--IIAACKPRITLRGTQYSIPMPKGGREAITKNLILREDQ-LP-Q 539
Query: 328 RPTRLGRTKTNALDP--DYIAGMSPFAVHDINSKSAM 362
+ RTK A P +Y F H + K+ +
Sbjct: 540 KLLH-PRTKKKASKPGDEYFVSDDVFLNHHSDRKAPL 575
Score = 169 (64.5 bits), Expect = 2.0e-34, Sum P(2) = 2.0e-34
Identities = 32/86 (37%), Positives = 51/86 (59%)
Query: 1 DIGDNVITIPEVVNEVTSKRQIRRLVVLPYDLQIKEADPDSISFVTEFSKKTGDYPSLSS 60
+ D +T+PEV++E+ RRL +P+ + E P+S+S V +F++ TGD SLS
Sbjct: 63 NFADKFVTVPEVLSEIRDPASRRRLAFIPFTIDTMEPSPESLSKVIKFARATGDLQSLSD 122
Query: 61 TDIKVIALTYELHKQHIGVDSINTEP 86
D+K+IAL+Y L Q G ++ P
Sbjct: 123 VDLKLIALSYTLEAQVYGTKNLRDVP 148
>ASPGD|ASPL0000014547 [details] [associations]
symbol:AN8253 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR006596 EMBL:BN001302
GO:GO:0000502 EMBL:AACD01000145 SMART:SM00670 eggNOG:COG1439
HOGENOM:HOG000159692 KO:K11883 InterPro:IPR017117
InterPro:IPR014881 Pfam:PF08772 PIRSF:PIRSF037125 OMA:KEPLPEY
OrthoDB:EOG4CRQ7R RefSeq:XP_681522.1 ProteinModelPortal:Q5ATX7
STRING:Q5ATX7 EnsemblFungi:CADANIAT00004311 GeneID:2869144
KEGG:ani:AN8253.2 Uniprot:Q5ATX7
Length = 431
Score = 263 (97.6 bits), Expect = 2.4e-32, Sum P(2) = 2.4e-32
Identities = 71/184 (38%), Positives = 97/184 (52%)
Query: 186 WITPSNLKQAQ---RTMDARQYEE-KPLVVSCVTTDFAMQNVLKQMGLNVVALDG-RLIR 240
WITPSNLK+ Q DA E K + V+ +TTDFA QNVL QM LN+++ + I
Sbjct: 223 WITPSNLKKRQARDEVGDATAASEVKVMQVATMTTDFACQNVLLQMNLNLLSTATLQRIS 282
Query: 241 ELRTFILRCYACYKTTSIMTKVFCPKCGYKTLKRVAVSVDEQGKQKIHINLKRPLTARGK 300
L++FI RC+AC+ TT M K FCP+CG TL RV+ + D G+ K+H+ RG
Sbjct: 283 HLKSFIKRCHACFSTTKDMNKQFCPRCGGDTLTRVSCTTDSSGQFKMHLKKNMQWNNRGN 342
Query: 301 KFSLPT---------FKGGKH----ANNPIVAEDQPV---PDQRPTRLGRTKTNALDPDY 344
FS+P +KGG I AEDQ +R R + + +D DY
Sbjct: 343 VFSVPKPVHGSASGKWKGGGGKGGWGTELIFAEDQKEYVRATAEQSRKLRRERDLMDEDY 402
Query: 345 IAGM 348
+ G+
Sbjct: 403 LPGI 406
Score = 134 (52.2 bits), Expect = 2.4e-32, Sum P(2) = 2.4e-32
Identities = 33/92 (35%), Positives = 55/92 (59%)
Query: 4 DNVITIPEVVNEVTSKRQIRRL--VVLPYDLQIKEADPDSISFVTEFSKKTGDYPSLSST 61
+ ++T P VV E+ +RL + LP+ L+ + P S + ++EF+KKTGD LS T
Sbjct: 35 EELVTTPSVVAEIRDPDARQRLETMYLPF-LKQRTPSPKSFAVLSEFAKKTGDRAVLSRT 93
Query: 62 DIKVIALTYELHKQHIGVD-SINTEPISRQIS 92
DI+V+AL YEL + G D + + P ++++
Sbjct: 94 DIEVLALAYELECERNGGDWRLRSVPGQKRVN 125
>UNIPROTKB|G4MQ79 [details] [associations]
symbol:MGG_09254 "20S-pre-rRNA D-site endonuclease NOB1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR006596 GO:GO:0004519 EMBL:CM001231
SMART:SM00670 KO:K11883 InterPro:IPR017117 InterPro:IPR014881
Pfam:PF08772 PIRSF:PIRSF037125 RefSeq:XP_003709884.1
ProteinModelPortal:G4MQ79 EnsemblFungi:MGG_09254T0 GeneID:2680190
KEGG:mgr:MGG_09254 Uniprot:G4MQ79
Length = 467
Score = 246 (91.7 bits), Expect = 2.1e-29, Sum P(2) = 2.1e-29
Identities = 64/182 (35%), Positives = 95/182 (52%)
Query: 186 WITPSNLKQAQRTMDARQYEEKP----LVVSCVTTDFAMQNVLKQMGLNVVALDGRLIRE 241
WITPSN+K+ + + + E+P L + +T+DFAMQNV ++ LNVV+ I
Sbjct: 260 WITPSNIKKHKAKDNPTRAPEQPIQRVLQAALLTSDFAMQNVSLRINLNVVSPTLARITH 319
Query: 242 LRTFILRCYACYKTTSIMTKVFCPKCGYKTLKRVAVSVDEQGKQKIHINLKRPLTARGKK 301
L++++LRC+ C+ T M K FCPKCG TL R + S D G K+H+ RG
Sbjct: 320 LKSWVLRCHGCFAVTRQMEKQFCPKCGQPTLTRTSCSTDTNGNFKVHLKRNFQWNNRGNV 379
Query: 302 FSLP-----------TFKGG-KHA--NNPIVAEDQPVPDQRPTRLGRTKTNAL-DPDYIA 346
FS+P T GG K+ + ++AEDQ ++ R + L D DY+
Sbjct: 380 FSIPKPVHGTASGKKTVSGGGKNGWGKDLLLAEDQKEYQRKVDDERRARVRDLMDEDYLP 439
Query: 347 GM 348
G+
Sbjct: 440 GI 441
Score = 136 (52.9 bits), Expect = 2.1e-29, Sum P(2) = 2.1e-29
Identities = 29/71 (40%), Positives = 47/71 (66%)
Query: 4 DNVITIPEVVNEVTSKRQIRRL--VVLPYDLQIKEADPDSISFVTEFSKKTGDYPSLSST 61
+ + TIP V+ E+ + R+ +LP+ L+++ P+SI FV++F+++TGD LS
Sbjct: 70 EELYTIPAVLEEIRDEATRTRINNTLLPF-LKLRSPKPESIKFVSDFARRTGDLEVLSRP 128
Query: 62 DIKVIALTYEL 72
DI +IALTYEL
Sbjct: 129 DIALIALTYEL 139
>CGD|CAL0000302 [details] [associations]
symbol:HBR3 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0030688 "preribosome, small subunit precursor" evidence=IEA]
[GO:0004521 "endoribonuclease activity" evidence=IEA] [GO:0070181
"SSU rRNA binding" evidence=IEA] [GO:0043248 "proteasome assembly"
evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
CGD:CAL0000302 InterPro:IPR006596 EMBL:AACQ01000148
EMBL:AACQ01000147 SMART:SM00670 eggNOG:COG1439 KO:K11883
InterPro:IPR017117 InterPro:IPR014881 Pfam:PF08772
PIRSF:PIRSF037125 RefSeq:XP_712719.1 RefSeq:XP_712756.1
ProteinModelPortal:Q59SR4 STRING:Q59SR4 GeneID:3645652
GeneID:3645689 KEGG:cal:CaO19.14217 KEGG:cal:CaO19.6955
Uniprot:Q59SR4
Length = 466
Score = 217 (81.4 bits), Expect = 1.6e-23, Sum P(2) = 1.6e-23
Identities = 52/132 (39%), Positives = 76/132 (57%)
Query: 186 WITPSNLKQAQRTMDARQYEEK----PLV-VSCVTTDFAMQNVLKQMGLNVV-ALDGRLI 239
WITP NL++ Q +E PL+ V+ T DFA QNV Q+G+ ++ A+ G+ I
Sbjct: 237 WITPENLQEEIIKDKNEQVQESNTNGPLIKVALATGDFACQNVAMQIGIKLLNAMSGKQI 296
Query: 240 RELRTFILRCYACYKTTSIMT----KVFCPKCGYKTLKRVAVSVDEQ-GKQKIHINLKRP 294
+R ++ RC+AC++ T + K FCPKCG TL R AVSVD + GK H+
Sbjct: 297 TRVRNYMYRCHACFRLTPMSKDGRPKHFCPKCGGNTLLRCAVSVDNKTGKITPHLKQNFQ 356
Query: 295 LTARGKKFSLPT 306
RG+++SLP+
Sbjct: 357 WIRRGERYSLPS 368
Score = 117 (46.2 bits), Expect = 1.6e-23, Sum P(2) = 1.6e-23
Identities = 27/79 (34%), Positives = 45/79 (56%)
Query: 8 TIPEVVNEVTSKRQIRRLVVLPYDLQIKEADPDSISFVTEFSKKTGDYPSLSSTDIKVIA 67
T P V +E+ + ++L + L+IK+ + I V +F+K TGDY LS D+ ++A
Sbjct: 34 TTPGVHSELKDEYARQQLAIWGDSLKIKQPKQEYIDRVVKFAKLTGDYSVLSVNDLHIVA 93
Query: 68 LTYELHKQHIGVDSINTEP 86
L YEL + G D++ + P
Sbjct: 94 LAYELECLNNGEDNLRSFP 112
>SGD|S000005582 [details] [associations]
symbol:NOB1 "Protein involved in proteasomal and 40S
ribosomal subunit biogenesis" species:4932 "Saccharomyces
cerevisiae" [GO:0042274 "ribosomal small subunit biogenesis"
evidence=IDA;IPI] [GO:0070181 "SSU rRNA binding" evidence=IDA]
[GO:0043248 "proteasome assembly" evidence=IMP;IPI] [GO:0000462
"maturation of SSU-rRNA from tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEP;IMP] [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA;IDA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0004518 "nuclease activity" evidence=IEA] [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0030688 "preribosome, small subunit
precursor" evidence=IDA] [GO:0090305 "nucleic acid phosphodiester
bond hydrolysis" evidence=IEA] [GO:0004521 "endoribonuclease
activity" evidence=IDA] [GO:0030490 "maturation of SSU-rRNA"
evidence=IDA] SGD:S000005582 InterPro:IPR006596 GO:GO:0005783
GO:GO:0005737 GO:GO:0005730 EMBL:BK006948 GO:GO:0046872
GO:GO:0043248 GO:GO:0004521 EMBL:Z70678 GO:GO:0070181 GO:GO:0000462
SMART:SM00670 GO:GO:0030688 eggNOG:COG1439 HOGENOM:HOG000159692
KO:K11883 InterPro:IPR017117 InterPro:IPR014881 Pfam:PF08772
PIRSF:PIRSF037125 OMA:KEPLPEY GeneTree:ENSGT00390000015857
HSSP:Q8BW10 OrthoDB:EOG4CRQ7R EMBL:Z74964 PIR:S66939
RefSeq:NP_014699.1 ProteinModelPortal:Q08444 SMR:Q08444
DIP:DIP-6440N IntAct:Q08444 MINT:MINT-621960 STRING:Q08444
PaxDb:Q08444 PeptideAtlas:Q08444 EnsemblFungi:YOR056C GeneID:854221
KEGG:sce:YOR056C CYGD:YOR056c NextBio:976086 Genevestigator:Q08444
Uniprot:Q08444
Length = 459
Score = 156 (60.0 bits), Expect = 3.9e-15, Sum P(3) = 3.9e-15
Identities = 39/101 (38%), Positives = 57/101 (56%)
Query: 211 VSCVTTDFAMQNVLKQMGLNVVA-LDGRLIRELRTFILRCYACYKTTSI----MTKVFCP 265
V+ T DFA+QNV QM LN++ + G I+ +R ++LRC+AC+K + K FC
Sbjct: 265 VALATGDFAVQNVALQMNLNLMNFMSGLKIKRIRNYMLRCHACFKIFPLPKDGKPKHFCA 324
Query: 266 KCGYK-TLKRVAVSVDEQ-GKQKIHINLKRPLTARGKKFSL 304
CG + TL R AVSVD + G H+ RG ++S+
Sbjct: 325 SCGGQGTLLRCAVSVDSRTGNVTPHLKSNFQWNNRGNRYSV 365
Score = 101 (40.6 bits), Expect = 3.9e-15, Sum P(3) = 3.9e-15
Identities = 24/67 (35%), Positives = 38/67 (56%)
Query: 8 TIPEVVNEVTSKRQIRRLVVLPY--DLQIKEADPDSISFVTEFSKKTGDYPSLSSTDIKV 65
T P V E+ + + L + L++ +SI+ V+ F+K TGDY LS+ D+ +
Sbjct: 36 TTPTVFQEIKDAQARKNLEIWQSLGTLKLVHPSENSIAKVSTFAKLTGDYSVLSANDLHI 95
Query: 66 IALTYEL 72
+ALTYEL
Sbjct: 96 LALTYEL 102
Score = 42 (19.8 bits), Expect = 3.9e-15, Sum P(3) = 3.9e-15
Identities = 7/10 (70%), Positives = 8/10 (80%)
Query: 186 WITPSNLKQA 195
WITP NL +A
Sbjct: 223 WITPENLTEA 232
>FB|FBgn0028665 [details] [associations]
symbol:VhaAC39-1 "Vacuolar H[+] ATPase AC39 subunit 1"
species:7227 "Drosophila melanogaster" [GO:0000220 "vacuolar
proton-transporting V-type ATPase, V0 domain" evidence=ISS;NAS]
[GO:0046961 "proton-transporting ATPase activity, rotational
mechanism" evidence=ISS] [GO:0015992 "proton transport"
evidence=NAS] [GO:0015991 "ATP hydrolysis coupled proton transport"
evidence=IEA] [GO:0033181 "plasma membrane proton-transporting
V-type ATPase complex" evidence=IMP] [GO:0007035 "vacuolar
acidification" evidence=IMP] [GO:0008593 "regulation of Notch
signaling pathway" evidence=IMP] [GO:0005886 "plasma membrane"
evidence=IDA] InterPro:IPR016727 PIRSF:PIRSF018497
InterPro:IPR002843 GO:GO:0005886 EMBL:AE014298 GO:GO:0015991
GO:GO:0008553 GO:GO:0007035 GO:GO:0008593 KO:K02146 GO:GO:0000220
eggNOG:COG1527 OMA:TWIAECI PANTHER:PTHR11028 Pfam:PF01992
SUPFAM:SSF103486 GeneTree:ENSGT00390000002200 EMBL:AY069530
RefSeq:NP_570080.1 UniGene:Dm.2086 ProteinModelPortal:Q9W4P5
DIP:DIP-18121N IntAct:Q9W4P5 MINT:MINT-301764 STRING:Q9W4P5
PaxDb:Q9W4P5 PRIDE:Q9W4P5 EnsemblMetazoa:FBtr0070611 GeneID:31342
KEGG:dme:Dmel_CG2934 UCSC:CG2934-RA CTD:31342 FlyBase:FBgn0028665
InParanoid:Q9W4P5 OrthoDB:EOG4CC2GS PhylomeDB:Q9W4P5
GenomeRNAi:31342 NextBio:773143 Bgee:Q9W4P5 GermOnline:CG2934
Uniprot:Q9W4P5
Length = 350
Score = 182 (69.1 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 34/45 (75%), Positives = 38/45 (84%)
Query: 112 SRGCTFNVDGGYLEGLCRGFKNGILKQTDYLNLVQCESLEELEDH 156
S G FN+D GYLEGLCRGFK GILKQ DYLNLVQCE+LE+L+ H
Sbjct: 3 SSGFMFNIDNGYLEGLCRGFKCGILKQADYLNLVQCETLEDLKLH 47
>UNIPROTKB|H3BQB4 [details] [associations]
symbol:ATP6V0D1 "V-type proton ATPase subunit d 1"
species:9606 "Homo sapiens" [GO:0015078 "hydrogen ion transmembrane
transporter activity" evidence=IEA] [GO:0015991 "ATP hydrolysis
coupled proton transport" evidence=IEA] [GO:0033179
"proton-transporting V-type ATPase, V0 domain" evidence=IEA]
InterPro:IPR016727 InterPro:IPR002843 GO:GO:0015991 GO:GO:0015078
GO:GO:0033179 PANTHER:PTHR11028 Pfam:PF01992 SUPFAM:SSF103486
HGNC:HGNC:13724 ChiTaRS:ATP6V0D1 EMBL:AC009061
ProteinModelPortal:H3BQB4 Ensembl:ENST00000564788 Bgee:H3BQB4
Uniprot:H3BQB4
Length = 113
Score = 156 (60.0 bits), Expect = 1.0e-10, P = 1.0e-10
Identities = 29/40 (72%), Positives = 33/40 (82%)
Query: 117 FNVDGGYLEGLCRGFKNGILKQTDYLNLVQCESLEELEDH 156
FNVD GYLEGL RG K G+L Q DYLNLVQCE+LE+L+ H
Sbjct: 9 FNVDNGYLEGLVRGLKAGVLSQADYLNLVQCETLEDLKLH 48
>UNIPROTKB|H3BSG7 [details] [associations]
symbol:ATP6V0D1 "V-type proton ATPase subunit d 1"
species:9606 "Homo sapiens" [GO:0015078 "hydrogen ion transmembrane
transporter activity" evidence=IEA] [GO:0015991 "ATP hydrolysis
coupled proton transport" evidence=IEA] [GO:0033179
"proton-transporting V-type ATPase, V0 domain" evidence=IEA]
InterPro:IPR016727 InterPro:IPR002843 GO:GO:0015991 GO:GO:0015078
GO:GO:0033179 PANTHER:PTHR11028 Pfam:PF01992 SUPFAM:SSF103486
HGNC:HGNC:13724 ChiTaRS:ATP6V0D1 EMBL:AC009061
ProteinModelPortal:H3BSG7 Ensembl:ENST00000564191 Bgee:H3BSG7
Uniprot:H3BSG7
Length = 115
Score = 156 (60.0 bits), Expect = 1.0e-10, P = 1.0e-10
Identities = 29/40 (72%), Positives = 33/40 (82%)
Query: 117 FNVDGGYLEGLCRGFKNGILKQTDYLNLVQCESLEELEDH 156
FNVD GYLEGL RG K G+L Q DYLNLVQCE+LE+L+ H
Sbjct: 9 FNVDNGYLEGLVRGLKAGVLSQADYLNLVQCETLEDLKLH 48
>UNIPROTKB|H3BTB5 [details] [associations]
symbol:ATP6V0D1 "V-type proton ATPase subunit d 1"
species:9606 "Homo sapiens" [GO:0015078 "hydrogen ion transmembrane
transporter activity" evidence=IEA] [GO:0015991 "ATP hydrolysis
coupled proton transport" evidence=IEA] [GO:0033179
"proton-transporting V-type ATPase, V0 domain" evidence=IEA]
InterPro:IPR016727 InterPro:IPR002843 GO:GO:0015991 GO:GO:0015078
GO:GO:0033179 PANTHER:PTHR11028 Pfam:PF01992 HGNC:HGNC:13724
ChiTaRS:ATP6V0D1 EMBL:AC009061 Ensembl:ENST00000563064 Bgee:H3BTB5
Uniprot:H3BTB5
Length = 57
Score = 149 (57.5 bits), Expect = 6.0e-10, P = 6.0e-10
Identities = 28/41 (68%), Positives = 32/41 (78%)
Query: 117 FNVDGGYLEGLCRGFKNGILKQTDYLNLVQCESLEELEDHT 157
FNVD GYLEGL RG K G+L Q DYLNLVQCE+LE ++ T
Sbjct: 9 FNVDNGYLEGLVRGLKAGVLSQADYLNLVQCETLEGMDGAT 49
>UNIPROTKB|H3BUQ0 [details] [associations]
symbol:ATP6V0D1 "V-type proton ATPase subunit d 1"
species:9606 "Homo sapiens" [GO:0015078 "hydrogen ion transmembrane
transporter activity" evidence=IEA] [GO:0015991 "ATP hydrolysis
coupled proton transport" evidence=IEA] [GO:0033179
"proton-transporting V-type ATPase, V0 domain" evidence=IEA]
InterPro:IPR016727 InterPro:IPR002843 GO:GO:0015991 GO:GO:0015078
GO:GO:0033179 PANTHER:PTHR11028 Pfam:PF01992 HGNC:HGNC:13724
ChiTaRS:ATP6V0D1 EMBL:AC009061 Ensembl:ENST00000561852 Bgee:H3BUQ0
Uniprot:H3BUQ0
Length = 47
Score = 145 (56.1 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 27/35 (77%), Positives = 29/35 (82%)
Query: 117 FNVDGGYLEGLCRGFKNGILKQTDYLNLVQCESLE 151
FNVD GYLEGL RG K G+L Q DYLNLVQCE+LE
Sbjct: 9 FNVDNGYLEGLVRGLKAGVLSQADYLNLVQCETLE 43
>ZFIN|ZDB-GENE-030131-1531 [details] [associations]
symbol:atp6v0d1 "ATPase, H+ transporting, V0
subunit D isoform 1" species:7955 "Danio rerio" [GO:0015991 "ATP
hydrolysis coupled proton transport" evidence=IEA] [GO:0033179
"proton-transporting V-type ATPase, V0 domain" evidence=IEA]
[GO:0015078 "hydrogen ion transmembrane transporter activity"
evidence=IEA] [GO:0060041 "retina development in camera-type eye"
evidence=IMP] [GO:0046688 "response to copper ion" evidence=IMP]
[GO:0032438 "melanosome organization" evidence=IMP] [GO:0008057
"eye pigment granule organization" evidence=IMP] [GO:0003406
"retinal pigment epithelium development" evidence=IMP]
InterPro:IPR016727 PIRSF:PIRSF018497 InterPro:IPR002843
ZFIN:ZDB-GENE-030131-1531 GO:GO:0046688 GO:GO:0032438 GO:GO:0008057
GO:GO:0015991 GO:GO:0015078 KO:K02146 GO:GO:0003406
HOGENOM:HOG000199065 OMA:TWIAECI GO:GO:0033179 PANTHER:PTHR11028
Pfam:PF01992 SUPFAM:SSF103486 CTD:9114 GeneTree:ENSGT00390000002200
HOVERGEN:HBG018065 OrthoDB:EOG4T4CVN EMBL:CR356247 EMBL:BC056822
EMBL:AY648766 IPI:IPI00498104 RefSeq:NP_955914.1 UniGene:Dr.77332
STRING:Q6PGV1 Ensembl:ENSDART00000100254 GeneID:322811
KEGG:dre:322811 InParanoid:Q6PGV1 NextBio:20807947 Uniprot:Q6PGV1
Length = 350
Score = 163 (62.4 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 31/40 (77%), Positives = 34/40 (85%)
Query: 117 FNVDGGYLEGLCRGFKNGILKQTDYLNLVQCESLEELEDH 156
FNVD GYLEGL RGFK GIL Q DYLNLVQCE+LE+L+ H
Sbjct: 8 FNVDNGYLEGLVRGFKAGILSQADYLNLVQCETLEDLKLH 47
>UNIPROTKB|E1BVF8 [details] [associations]
symbol:LOC100857345 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0015991 "ATP hydrolysis coupled proton
transport" evidence=IEA] [GO:0033179 "proton-transporting V-type
ATPase, V0 domain" evidence=IEA] [GO:0005769 "early endosome"
evidence=IEA] [GO:0008553 "hydrogen-exporting ATPase activity,
phosphorylative mechanism" evidence=IEA] InterPro:IPR016727
PIRSF:PIRSF018497 InterPro:IPR002843 GO:GO:0005769 GO:GO:0015991
GO:GO:0008553 KO:K02146 OMA:TWIAECI GO:GO:0033179 PANTHER:PTHR11028
Pfam:PF01992 SUPFAM:SSF103486 CTD:9114 GeneTree:ENSGT00390000002200
EMBL:AADN02051621 IPI:IPI00591538 RefSeq:XP_414041.1
UniGene:Gga.7507 Ensembl:ENSGALT00000003500 GeneID:415674
KEGG:gga:415674 NextBio:20819238 Uniprot:E1BVF8
Length = 351
Score = 162 (62.1 bits), Expect = 3.0e-09, P = 3.0e-09
Identities = 30/40 (75%), Positives = 35/40 (87%)
Query: 117 FNVDGGYLEGLCRGFKNGILKQTDYLNLVQCESLEELEDH 156
FNVD GYLEGL RGFK G+L+Q DY+NLVQCESLE+L+ H
Sbjct: 9 FNVDNGYLEGLVRGFKAGVLRQGDYVNLVQCESLEDLKLH 48
>UNIPROTKB|P61420 [details] [associations]
symbol:ATP6V0D1 "V-type proton ATPase subunit d 1"
species:9913 "Bos taurus" [GO:0008553 "hydrogen-exporting ATPase
activity, phosphorylative mechanism" evidence=IEA] [GO:0005769
"early endosome" evidence=IEA] [GO:0033179 "proton-transporting
V-type ATPase, V0 domain" evidence=IEA] [GO:0015991 "ATP hydrolysis
coupled proton transport" evidence=IEA] InterPro:IPR016727
PIRSF:PIRSF018497 InterPro:IPR002843 GO:GO:0005769 GO:GO:0015991
GO:GO:0008553 KO:K02146 eggNOG:COG1527 HOGENOM:HOG000199065
OMA:TWIAECI GO:GO:0033179 PANTHER:PTHR11028 Pfam:PF01992
SUPFAM:SSF103486 EMBL:J04204 EMBL:BC102305 IPI:IPI00716195
PIR:A32123 RefSeq:NP_776930.1 UniGene:Bt.1575
ProteinModelPortal:P61420 STRING:P61420 PRIDE:P61420
Ensembl:ENSBTAT00000019346 GeneID:282148 KEGG:bta:282148 CTD:9114
GeneTree:ENSGT00390000002200 HOVERGEN:HBG018065 InParanoid:P61420
OrthoDB:EOG4T4CVN NextBio:20805982 Uniprot:P61420
Length = 351
Score = 156 (60.0 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 29/40 (72%), Positives = 33/40 (82%)
Query: 117 FNVDGGYLEGLCRGFKNGILKQTDYLNLVQCESLEELEDH 156
FNVD GYLEGL RG K G+L Q DYLNLVQCE+LE+L+ H
Sbjct: 9 FNVDNGYLEGLVRGLKAGVLSQADYLNLVQCETLEDLKLH 48
>UNIPROTKB|E2RJQ8 [details] [associations]
symbol:ATP6V0D1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0008553 "hydrogen-exporting ATPase
activity, phosphorylative mechanism" evidence=IEA] [GO:0005769
"early endosome" evidence=IEA] [GO:0033179 "proton-transporting
V-type ATPase, V0 domain" evidence=IEA] [GO:0015991 "ATP hydrolysis
coupled proton transport" evidence=IEA] InterPro:IPR016727
PIRSF:PIRSF018497 InterPro:IPR002843 GO:GO:0005769 GO:GO:0015991
GO:GO:0008553 KO:K02146 OMA:TWIAECI GO:GO:0033179 PANTHER:PTHR11028
Pfam:PF01992 SUPFAM:SSF103486 CTD:9114 GeneTree:ENSGT00390000002200
EMBL:AAEX03004125 RefSeq:XP_536816.2 ProteinModelPortal:E2RJQ8
Ensembl:ENSCAFT00000032422 GeneID:479685 KEGG:cfa:479685
NextBio:20854830 Uniprot:E2RJQ8
Length = 351
Score = 156 (60.0 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 29/40 (72%), Positives = 33/40 (82%)
Query: 117 FNVDGGYLEGLCRGFKNGILKQTDYLNLVQCESLEELEDH 156
FNVD GYLEGL RG K G+L Q DYLNLVQCE+LE+L+ H
Sbjct: 9 FNVDNGYLEGLVRGLKAGVLSQADYLNLVQCETLEDLKLH 48
>UNIPROTKB|P61421 [details] [associations]
symbol:ATP6V0D1 "V-type proton ATPase subunit d 1"
species:9606 "Homo sapiens" [GO:0015991 "ATP hydrolysis coupled
proton transport" evidence=IEA] [GO:0033179 "proton-transporting
V-type ATPase, V0 domain" evidence=IEA] [GO:0005769 "early
endosome" evidence=IEA] [GO:0007420 "brain development"
evidence=IEA] [GO:0008021 "synaptic vesicle" evidence=IEA]
[GO:0008553 "hydrogen-exporting ATPase activity, phosphorylative
mechanism" evidence=IEA] [GO:0016324 "apical plasma membrane"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=IEA]
[GO:0043679 "axon terminus" evidence=IEA] [GO:0015992 "proton
transport" evidence=NAS] [GO:0016471 "vacuolar proton-transporting
V-type ATPase complex" evidence=IDA;NAS] [GO:0016020 "membrane"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006879 "cellular iron ion homeostasis" evidence=TAS]
[GO:0006987 "activation of signaling protein activity involved in
unfolded protein response" evidence=TAS] [GO:0008286 "insulin
receptor signaling pathway" evidence=TAS] [GO:0010008 "endosome
membrane" evidence=TAS] [GO:0030670 "phagocytic vesicle membrane"
evidence=TAS] [GO:0030968 "endoplasmic reticulum unfolded protein
response" evidence=TAS] [GO:0033572 "transferrin transport"
evidence=TAS] [GO:0051701 "interaction with host" evidence=TAS]
[GO:0055085 "transmembrane transport" evidence=TAS] [GO:0090382
"phagosome maturation" evidence=TAS] Reactome:REACT_15518
InterPro:IPR016727 PIRSF:PIRSF018497 InterPro:IPR002843
Reactome:REACT_111102 Reactome:REACT_116125 GO:GO:0008286
GO:GO:0007420 GO:GO:0030670 GO:GO:0006987 GO:GO:0016324
GO:GO:0043679 GO:GO:0008021 GO:GO:0055085 GO:GO:0006879
GO:GO:0010008 GO:GO:0005769 GO:GO:0015992 GO:GO:0015991
GO:GO:0008553 GO:GO:0051701 GO:GO:0090382 GO:GO:0033572 KO:K02146
eggNOG:COG1527 HOGENOM:HOG000199065 GO:GO:0033179 PANTHER:PTHR11028
Pfam:PF01992 SUPFAM:SSF103486 CTD:9114 HOVERGEN:HBG018065
OrthoDB:EOG4T4CVN EMBL:X71490 EMBL:BC008861 EMBL:L05087
IPI:IPI00034159 RefSeq:NP_004682.2 UniGene:Hs.106876
ProteinModelPortal:P61421 IntAct:P61421 MINT:MINT-5006032
STRING:P61421 TCDB:3.A.2.2.4 PhosphoSite:P61421 DMDM:47606646
PaxDb:P61421 PeptideAtlas:P61421 PRIDE:P61421 DNASU:9114
Ensembl:ENST00000290949 GeneID:9114 KEGG:hsa:9114 UCSC:uc002ete.1
GeneCards:GC16M067471 HGNC:HGNC:13724 HPA:HPA016938 MIM:607028
neXtProt:NX_P61421 PharmGKB:PA25150 InParanoid:P61421
PhylomeDB:P61421 ChiTaRS:ATP6V0D1 GenomeRNAi:9114 NextBio:34161
ArrayExpress:P61421 Bgee:P61421 CleanEx:HS_ATP6V0D1
Genevestigator:P61421 GermOnline:ENSG00000159720 GO:GO:0016471
Uniprot:P61421
Length = 351
Score = 156 (60.0 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 29/40 (72%), Positives = 33/40 (82%)
Query: 117 FNVDGGYLEGLCRGFKNGILKQTDYLNLVQCESLEELEDH 156
FNVD GYLEGL RG K G+L Q DYLNLVQCE+LE+L+ H
Sbjct: 9 FNVDNGYLEGLVRGLKAGVLSQADYLNLVQCETLEDLKLH 48
>UNIPROTKB|F2Z5H6 [details] [associations]
symbol:ATP6V0D1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008553 "hydrogen-exporting ATPase activity,
phosphorylative mechanism" evidence=IEA] [GO:0005769 "early
endosome" evidence=IEA] [GO:0033179 "proton-transporting V-type
ATPase, V0 domain" evidence=IEA] [GO:0015991 "ATP hydrolysis
coupled proton transport" evidence=IEA] InterPro:IPR016727
PIRSF:PIRSF018497 InterPro:IPR002843 GO:GO:0005769 GO:GO:0015991
GO:GO:0008553 KO:K02146 OMA:TWIAECI GO:GO:0033179 PANTHER:PTHR11028
Pfam:PF01992 SUPFAM:SSF103486 GeneTree:ENSGT00390000002200
EMBL:CU929737 RefSeq:XP_003126994.1 UniGene:Ssc.21632
ProteinModelPortal:F2Z5H6 PRIDE:F2Z5H6 Ensembl:ENSSSCT00000003074
GeneID:100525048 KEGG:ssc:100525048 Uniprot:F2Z5H6
Length = 351
Score = 156 (60.0 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 29/40 (72%), Positives = 33/40 (82%)
Query: 117 FNVDGGYLEGLCRGFKNGILKQTDYLNLVQCESLEELEDH 156
FNVD GYLEGL RG K G+L Q DYLNLVQCE+LE+L+ H
Sbjct: 9 FNVDNGYLEGLVRGLKAGVLSQADYLNLVQCETLEDLKLH 48
>MGI|MGI:1201778 [details] [associations]
symbol:Atp6v0d1 "ATPase, H+ transporting, lysosomal V0
subunit D1" species:10090 "Mus musculus" [GO:0005769 "early
endosome" evidence=IDA] [GO:0006200 "ATP catabolic process"
evidence=IDA] [GO:0006810 "transport" evidence=IEA] [GO:0006811
"ion transport" evidence=IEA] [GO:0008021 "synaptic vesicle"
evidence=ISO] [GO:0008553 "hydrogen-exporting ATPase activity,
phosphorylative mechanism" evidence=IDA] [GO:0015078 "hydrogen ion
transmembrane transporter activity" evidence=IEA] [GO:0015991 "ATP
hydrolysis coupled proton transport" evidence=IEA] [GO:0015992
"proton transport" evidence=IDA] [GO:0016020 "membrane"
evidence=ISO] [GO:0016324 "apical plasma membrane" evidence=ISO]
[GO:0016471 "vacuolar proton-transporting V-type ATPase complex"
evidence=ISO] [GO:0032403 "protein complex binding" evidence=ISO]
[GO:0033179 "proton-transporting V-type ATPase, V0 domain"
evidence=IEA] [GO:0034220 "ion transmembrane transport"
evidence=IDA] [GO:0043005 "neuron projection" evidence=ISO]
[GO:0043234 "protein complex" evidence=ISO] [GO:0043679 "axon
terminus" evidence=ISO] InterPro:IPR016727 PIRSF:PIRSF018497
InterPro:IPR002843 MGI:MGI:1201778 GO:GO:0007420 GO:GO:0016324
GO:GO:0043679 GO:GO:0008021 GO:GO:0005769 GO:GO:0015991
GO:GO:0008553 KO:K02146 eggNOG:COG1527 HOGENOM:HOG000199065
OMA:TWIAECI GO:GO:0033179 PANTHER:PTHR11028 Pfam:PF01992
SUPFAM:SSF103486 CTD:9114 GeneTree:ENSGT00390000002200
HOVERGEN:HBG018065 OrthoDB:EOG4T4CVN ChiTaRS:ATP6V0D1 EMBL:U13840
EMBL:U21549 EMBL:AB088408 EMBL:AK083372 EMBL:AK171515
IPI:IPI00313841 RefSeq:NP_038505.2 UniGene:Mm.17708
ProteinModelPortal:P51863 IntAct:P51863 STRING:P51863
PhosphoSite:P51863 PaxDb:P51863 PRIDE:P51863
Ensembl:ENSMUST00000013304 GeneID:11972 KEGG:mmu:11972
UCSC:uc009ndg.1 InParanoid:P51863 NextBio:280095 Bgee:P51863
CleanEx:MM_ATP6V0D1 Genevestigator:P51863
GermOnline:ENSMUSG00000013160 Uniprot:P51863
Length = 351
Score = 156 (60.0 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 29/40 (72%), Positives = 33/40 (82%)
Query: 117 FNVDGGYLEGLCRGFKNGILKQTDYLNLVQCESLEELEDH 156
FNVD GYLEGL RG K G+L Q DYLNLVQCE+LE+L+ H
Sbjct: 9 FNVDNGYLEGLVRGLKAGVLSQADYLNLVQCETLEDLKLH 48
>RGD|1306159 [details] [associations]
symbol:Atp6v0d1 "ATPase, H+ transporting, lysosomal V0 subunit
D1" species:10116 "Rattus norvegicus" [GO:0005769 "early endosome"
evidence=IEA;ISO] [GO:0006200 "ATP catabolic process" evidence=ISO]
[GO:0007420 "brain development" evidence=IEP] [GO:0008021 "synaptic
vesicle" evidence=IDA] [GO:0008553 "hydrogen-exporting ATPase
activity, phosphorylative mechanism" evidence=IEA;ISO] [GO:0015991
"ATP hydrolysis coupled proton transport" evidence=IEA] [GO:0015992
"proton transport" evidence=ISO] [GO:0016020 "membrane"
evidence=ISO] [GO:0016324 "apical plasma membrane" evidence=IDA]
[GO:0016471 "vacuolar proton-transporting V-type ATPase complex"
evidence=ISO] [GO:0032403 "protein complex binding" evidence=IPI]
[GO:0033179 "proton-transporting V-type ATPase, V0 domain"
evidence=IEA] [GO:0034220 "ion transmembrane transport"
evidence=ISO] [GO:0043005 "neuron projection" evidence=IDA]
[GO:0043234 "protein complex" evidence=IDA] [GO:0043679 "axon
terminus" evidence=IDA] InterPro:IPR016727 PIRSF:PIRSF018497
InterPro:IPR002843 RGD:1306159 GO:GO:0043234 GO:GO:0007420
GO:GO:0016324 GO:GO:0043679 GO:GO:0008021 GO:GO:0005769
EMBL:CH473972 GO:GO:0015991 GO:GO:0008553 KO:K02146 eggNOG:COG1527
HOGENOM:HOG000199065 OMA:TWIAECI GO:GO:0033179 PANTHER:PTHR11028
Pfam:PF01992 SUPFAM:SSF103486 CTD:9114 GeneTree:ENSGT00390000002200
HOVERGEN:HBG018065 OrthoDB:EOG4T4CVN EMBL:BC088462 IPI:IPI00476086
RefSeq:NP_001011927.1 UniGene:Rn.94752 IntAct:Q5M7T6 STRING:Q5M7T6
Ensembl:ENSRNOT00000023606 GeneID:291969 KEGG:rno:291969
UCSC:RGD:1306159 InParanoid:Q5M7T6 NextBio:633523
Genevestigator:Q5M7T6 Uniprot:Q5M7T6
Length = 351
Score = 156 (60.0 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 29/40 (72%), Positives = 33/40 (82%)
Query: 117 FNVDGGYLEGLCRGFKNGILKQTDYLNLVQCESLEELEDH 156
FNVD GYLEGL RG K G+L Q DYLNLVQCE+LE+L+ H
Sbjct: 9 FNVDNGYLEGLVRGLKAGVLSQADYLNLVQCETLEDLKLH 48
>UNIPROTKB|F5GYQ1 [details] [associations]
symbol:ATP6V0D1 "V-type proton ATPase subunit d 1"
species:9606 "Homo sapiens" [GO:0015078 "hydrogen ion transmembrane
transporter activity" evidence=IEA] [GO:0015991 "ATP hydrolysis
coupled proton transport" evidence=IEA] [GO:0033179
"proton-transporting V-type ATPase, V0 domain" evidence=IEA]
InterPro:IPR016727 PIRSF:PIRSF018497 InterPro:IPR002843
GO:GO:0015991 GO:GO:0015078 OMA:TWIAECI GO:GO:0033179
PANTHER:PTHR11028 Pfam:PF01992 SUPFAM:SSF103486 HGNC:HGNC:13724
ChiTaRS:ATP6V0D1 EMBL:AC009061 IPI:IPI00922223
ProteinModelPortal:F5GYQ1 Ensembl:ENST00000540149 UCSC:uc010vjo.1
ArrayExpress:F5GYQ1 Bgee:F5GYQ1 Uniprot:F5GYQ1
Length = 392
Score = 156 (60.0 bits), Expect = 1.9e-08, P = 1.9e-08
Identities = 29/40 (72%), Positives = 33/40 (82%)
Query: 117 FNVDGGYLEGLCRGFKNGILKQTDYLNLVQCESLEELEDH 156
FNVD GYLEGL RG K G+L Q DYLNLVQCE+LE+L+ H
Sbjct: 9 FNVDNGYLEGLVRGLKAGVLSQADYLNLVQCETLEDLKLH 48
>UNIPROTKB|J3QL14 [details] [associations]
symbol:ATP6V0D1 "V-type proton ATPase subunit d 1"
species:9606 "Homo sapiens" [GO:0015078 "hydrogen ion transmembrane
transporter activity" evidence=IEA] [GO:0015991 "ATP hydrolysis
coupled proton transport" evidence=IEA] [GO:0033179
"proton-transporting V-type ATPase, V0 domain" evidence=IEA]
InterPro:IPR016727 InterPro:IPR002843 GO:GO:0015991 GO:GO:0015078
GO:GO:0033179 PANTHER:PTHR11028 Pfam:PF01992 SUPFAM:SSF103486
HGNC:HGNC:13724 ChiTaRS:ATP6V0D1 EMBL:AC009061
Ensembl:ENST00000565835 Uniprot:J3QL14
Length = 232
Score = 145 (56.1 bits), Expect = 5.8e-08, P = 5.8e-08
Identities = 27/35 (77%), Positives = 29/35 (82%)
Query: 117 FNVDGGYLEGLCRGFKNGILKQTDYLNLVQCESLE 151
FNVD GYLEGL RG K G+L Q DYLNLVQCE+LE
Sbjct: 7 FNVDNGYLEGLVRGLKAGVLSQADYLNLVQCETLE 41
>UNIPROTKB|E5RIR3 [details] [associations]
symbol:ATP6V0D2 "V-type proton ATPase subunit d 2"
species:9606 "Homo sapiens" [GO:0015078 "hydrogen ion transmembrane
transporter activity" evidence=IEA] [GO:0015991 "ATP hydrolysis
coupled proton transport" evidence=IEA] [GO:0033179
"proton-transporting V-type ATPase, V0 domain" evidence=IEA]
[GO:0005769 "early endosome" evidence=IEA] InterPro:IPR016727
InterPro:IPR002843 GO:GO:0016324 GO:GO:0005769 GO:GO:0015991
GO:GO:0015078 GO:GO:0033179 PANTHER:PTHR11028 Pfam:PF01992
SUPFAM:SSF103486 HGNC:HGNC:18266 EMBL:AC023194 EMBL:AC084128
IPI:IPI00980223 Ensembl:ENST00000523635 ArrayExpress:E5RIR3
Bgee:E5RIR3 Uniprot:E5RIR3
Length = 43
Score = 130 (50.8 bits), Expect = 7.2e-08, P = 7.2e-08
Identities = 25/35 (71%), Positives = 28/35 (80%)
Query: 117 FNVDGGYLEGLCRGFKNGILKQTDYLNLVQCESLE 151
FNVD GYLEGL RG K +L Q DY+NLVQCE+LE
Sbjct: 9 FNVDHGYLEGLVRGCKASLLTQQDYINLVQCETLE 43
>UNIPROTKB|Q5ZHL0 [details] [associations]
symbol:ATP6V0D2 "V-type proton ATPase subunit d 2"
species:9031 "Gallus gallus" [GO:0015078 "hydrogen ion
transmembrane transporter activity" evidence=IEA] [GO:0015991 "ATP
hydrolysis coupled proton transport" evidence=IEA] [GO:0033179
"proton-transporting V-type ATPase, V0 domain" evidence=IEA]
[GO:0005769 "early endosome" evidence=IEA] [GO:0016471 "vacuolar
proton-transporting V-type ATPase complex" evidence=IEA]
InterPro:IPR016727 PIRSF:PIRSF018497 InterPro:IPR002843
GO:GO:0005769 GO:GO:0015991 GO:GO:0015078 KO:K02146 eggNOG:COG1527
HOGENOM:HOG000199065 GO:GO:0033179 PANTHER:PTHR11028 Pfam:PF01992
SUPFAM:SSF103486 GeneTree:ENSGT00390000002200 HOVERGEN:HBG018065
OrthoDB:EOG4T4CVN GO:GO:0016471 OMA:FRNHAFE CTD:245972
EMBL:AJ721124 IPI:IPI00574720 RefSeq:NP_001008455.1
UniGene:Gga.22147 ProteinModelPortal:Q5ZHL0 STRING:Q5ZHL0
PRIDE:Q5ZHL0 Ensembl:ENSGALT00000025580 GeneID:420210
KEGG:gga:420210 InParanoid:Q5ZHL0 NextBio:20823158 Uniprot:Q5ZHL0
Length = 351
Score = 148 (57.2 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 28/40 (70%), Positives = 32/40 (80%)
Query: 117 FNVDGGYLEGLCRGFKNGILKQTDYLNLVQCESLEELEDH 156
FNVD GYLEGL RGFK GIL DY+NL QCE+LE+L+ H
Sbjct: 9 FNVDHGYLEGLVRGFKAGILTSADYVNLAQCETLEDLKLH 48
>UNIPROTKB|F1RXD2 [details] [associations]
symbol:ATP6V0D2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016471 "vacuolar proton-transporting V-type ATPase
complex" evidence=IEA] [GO:0005769 "early endosome" evidence=IEA]
[GO:0033179 "proton-transporting V-type ATPase, V0 domain"
evidence=IEA] [GO:0015991 "ATP hydrolysis coupled proton transport"
evidence=IEA] [GO:0015078 "hydrogen ion transmembrane transporter
activity" evidence=IEA] InterPro:IPR016727 PIRSF:PIRSF018497
InterPro:IPR002843 GO:GO:0005769 GO:GO:0015991 GO:GO:0015078
GO:GO:0033179 PANTHER:PTHR11028 Pfam:PF01992 SUPFAM:SSF103486
GeneTree:ENSGT00390000002200 GO:GO:0016471 OMA:FFTYMTC
EMBL:CU639431 Ensembl:ENSSSCT00000006731 Uniprot:F1RXD2
Length = 355
Score = 148 (57.2 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 28/40 (70%), Positives = 33/40 (82%)
Query: 117 FNVDGGYLEGLCRGFKNGILKQTDYLNLVQCESLEELEDH 156
FNVD GYLEGL RG K G+L Q DY+NLVQCE+LE+L+ H
Sbjct: 11 FNVDHGYLEGLVRGCKAGLLTQQDYINLVQCETLEDLKIH 50
>FB|FBgn0039058 [details] [associations]
symbol:VhaAC39-2 "Vacuolar H[+] ATPase AC39 subunit 2"
species:7227 "Drosophila melanogaster" [GO:0000220 "vacuolar
proton-transporting V-type ATPase, V0 domain" evidence=NAS]
[GO:0015991 "ATP hydrolysis coupled proton transport" evidence=IEA]
[GO:0033179 "proton-transporting V-type ATPase, V0 domain"
evidence=IEA] [GO:0046961 "proton-transporting ATPase activity,
rotational mechanism" evidence=ISS] InterPro:IPR016727
PIRSF:PIRSF018497 InterPro:IPR002843 EMBL:AE014297 GO:GO:0015991
GO:GO:0015078 eggNOG:COG1527 GO:GO:0033179 PANTHER:PTHR11028
Pfam:PF01992 SUPFAM:SSF103486 GeneTree:ENSGT00390000002200
EMBL:AY118615 EMBL:BT072817 RefSeq:NP_651128.1 UniGene:Dm.13983
ProteinModelPortal:Q9VCQ3 STRING:Q9VCQ3 PRIDE:Q9VCQ3
EnsemblMetazoa:FBtr0084401 GeneID:42739 KEGG:dme:Dmel_CG4624
UCSC:CG4624-RA CTD:42739 FlyBase:FBgn0039058 InParanoid:Q8MST4
OMA:GFKNGML OrthoDB:EOG4J0ZQM PhylomeDB:Q9VCQ3 GenomeRNAi:42739
NextBio:830315 Bgee:Q9VCQ3 GermOnline:CG4624 Uniprot:Q9VCQ3
Length = 350
Score = 143 (55.4 bits), Expect = 4.3e-07, P = 4.3e-07
Identities = 26/37 (70%), Positives = 31/37 (83%)
Query: 117 FNVDGGYLEGLCRGFKNGILKQTDYLNLVQCESLEEL 153
FN + GYLE L RGFKNG+LK +DYLNL QCESLE++
Sbjct: 5 FNTEYGYLEALTRGFKNGMLKHSDYLNLTQCESLEDV 41
>WB|WBGene00016258 [details] [associations]
symbol:vha-16 species:6239 "Caenorhabditis elegans"
[GO:0015078 "hydrogen ion transmembrane transporter activity"
evidence=IEA] [GO:0015991 "ATP hydrolysis coupled proton transport"
evidence=IEA] [GO:0033177 "proton-transporting two-sector ATPase
complex, proton-transporting domain" evidence=IEA] [GO:0033179
"proton-transporting V-type ATPase, V0 domain" evidence=IEA]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
InterPro:IPR016727 PIRSF:PIRSF018497 InterPro:IPR002843
GO:GO:0040007 GO:GO:0002119 GO:GO:0000003 GO:GO:0015991
GO:GO:0015078 KO:K02146 eggNOG:COG1527 HOGENOM:HOG000199065
OMA:TWIAECI GO:GO:0033179 PANTHER:PTHR11028 Pfam:PF01992
SUPFAM:SSF103486 GeneTree:ENSGT00390000002200 EMBL:FO080727
RefSeq:NP_491515.2 ProteinModelPortal:Q95YD5 IntAct:Q95YD5
MINT:MINT-211710 STRING:Q95YD5 PaxDb:Q95YD5
EnsemblMetazoa:C30F8.2.1 EnsemblMetazoa:C30F8.2.2
EnsemblMetazoa:C30F8.2.3 EnsemblMetazoa:C30F8.2.4 GeneID:172134
KEGG:cel:CELE_C30F8.2 UCSC:C30F8.2.1 CTD:172134 WormBase:C30F8.2
InParanoid:Q95YD5 NextBio:874159 Uniprot:Q95YD5
Length = 348
Score = 142 (55.0 bits), Expect = 5.4e-07, P = 5.4e-07
Identities = 26/40 (65%), Positives = 31/40 (77%)
Query: 117 FNVDGGYLEGLCRGFKNGILKQTDYLNLVQCESLEELEDH 156
FN+D GYLE L RG K G+L Q DY NLVQCE+LE+L+ H
Sbjct: 6 FNIDHGYLEALTRGLKGGLLAQADYANLVQCETLEDLKLH 45
>UNIPROTKB|Q8N8Y2 [details] [associations]
symbol:ATP6V0D2 "V-type proton ATPase subunit d 2"
species:9606 "Homo sapiens" [GO:0015078 "hydrogen ion transmembrane
transporter activity" evidence=IEA] [GO:0015991 "ATP hydrolysis
coupled proton transport" evidence=IEA] [GO:0033179
"proton-transporting V-type ATPase, V0 domain" evidence=IEA]
[GO:0005769 "early endosome" evidence=IEA] [GO:0016020 "membrane"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0016471 "vacuolar proton-transporting V-type ATPase complex"
evidence=IDA] [GO:0016324 "apical plasma membrane" evidence=IDA]
[GO:0006879 "cellular iron ion homeostasis" evidence=TAS]
[GO:0008286 "insulin receptor signaling pathway" evidence=TAS]
[GO:0010008 "endosome membrane" evidence=TAS] [GO:0030670
"phagocytic vesicle membrane" evidence=TAS] [GO:0033572
"transferrin transport" evidence=TAS] [GO:0051701 "interaction with
host" evidence=TAS] [GO:0055085 "transmembrane transport"
evidence=TAS] [GO:0090382 "phagosome maturation" evidence=TAS]
Reactome:REACT_15518 InterPro:IPR016727 PIRSF:PIRSF018497
InterPro:IPR002843 Reactome:REACT_111102 Reactome:REACT_116125
GO:GO:0008286 GO:GO:0030670 GO:GO:0016324 GO:GO:0055085
GO:GO:0006879 GO:GO:0010008 GO:GO:0005769 GO:GO:0015991
GO:GO:0015078 GO:GO:0051701 GO:GO:0090382 GO:GO:0033572 KO:K02146
eggNOG:COG1527 HOGENOM:HOG000199065 GO:GO:0033179 PANTHER:PTHR11028
Pfam:PF01992 SUPFAM:SSF103486 HOVERGEN:HBG018065 OrthoDB:EOG4T4CVN
GO:GO:0016471 CTD:245972 OMA:FFTYMTC EMBL:AY079172 EMBL:AK096027
EMBL:BC065207 IPI:IPI00167639 RefSeq:NP_689778.1 UniGene:Hs.436360
ProteinModelPortal:Q8N8Y2 IntAct:Q8N8Y2 STRING:Q8N8Y2
PhosphoSite:Q8N8Y2 DMDM:74729555 PRIDE:Q8N8Y2
Ensembl:ENST00000285393 GeneID:245972 KEGG:hsa:245972
UCSC:uc003ydp.1 GeneCards:GC08P086999 HGNC:HGNC:18266
neXtProt:NX_Q8N8Y2 PharmGKB:PA38516 InParanoid:Q8N8Y2
PhylomeDB:Q8N8Y2 GenomeRNAi:245972 NextBio:91831
ArrayExpress:Q8N8Y2 Bgee:Q8N8Y2 CleanEx:HS_ATP6V0D2
Genevestigator:Q8N8Y2 Uniprot:Q8N8Y2
Length = 350
Score = 142 (55.0 bits), Expect = 5.5e-07, P = 5.5e-07
Identities = 27/40 (67%), Positives = 32/40 (80%)
Query: 117 FNVDGGYLEGLCRGFKNGILKQTDYLNLVQCESLEELEDH 156
FNVD GYLEGL RG K +L Q DY+NLVQCE+LE+L+ H
Sbjct: 9 FNVDHGYLEGLVRGCKASLLTQQDYINLVQCETLEDLKIH 48
>UNIPROTKB|Q5R7B7 [details] [associations]
symbol:ATP6V0D2 "V-type proton ATPase subunit d 2"
species:9601 "Pongo abelii" [GO:0016324 "apical plasma membrane"
evidence=ISS] InterPro:IPR016727 PIRSF:PIRSF018497
InterPro:IPR002843 GO:GO:0016324 GO:GO:0015991 GO:GO:0015078
KO:K02146 GO:GO:0033179 PANTHER:PTHR11028 Pfam:PF01992
SUPFAM:SSF103486 HOVERGEN:HBG018065 CTD:245972 EMBL:CR860201
RefSeq:NP_001126378.1 UniGene:Pab.18802 GeneID:100173359
KEGG:pon:100173359 InParanoid:Q5R7B7 Uniprot:Q5R7B7
Length = 350
Score = 142 (55.0 bits), Expect = 5.5e-07, P = 5.5e-07
Identities = 27/40 (67%), Positives = 32/40 (80%)
Query: 117 FNVDGGYLEGLCRGFKNGILKQTDYLNLVQCESLEELEDH 156
FNVD GYLEGL RG K +L Q DY+NLVQCE+LE+L+ H
Sbjct: 9 FNVDHGYLEGLVRGCKASLLTQQDYINLVQCETLEDLKIH 48
>MGI|MGI:1924415 [details] [associations]
symbol:Atp6v0d2 "ATPase, H+ transporting, lysosomal V0
subunit D2" species:10090 "Mus musculus" [GO:0005768 "endosome"
evidence=ISO] [GO:0005769 "early endosome" evidence=IDA]
[GO:0006810 "transport" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0015078 "hydrogen ion transmembrane transporter
activity" evidence=IEA] [GO:0015991 "ATP hydrolysis coupled proton
transport" evidence=IEA] [GO:0015992 "proton transport"
evidence=IEA] [GO:0016020 "membrane" evidence=ISO] [GO:0016324
"apical plasma membrane" evidence=ISO] [GO:0016471 "vacuolar
proton-transporting V-type ATPase complex" evidence=ISO]
[GO:0033179 "proton-transporting V-type ATPase, V0 domain"
evidence=IEA] InterPro:IPR016727 PIRSF:PIRSF018497
InterPro:IPR002843 MGI:MGI:1924415 GO:GO:0016324 GO:GO:0005769
GO:GO:0015991 GO:GO:0015078 EMBL:AL732527 KO:K02146 eggNOG:COG1527
HOGENOM:HOG000199065 GO:GO:0033179 PANTHER:PTHR11028 Pfam:PF01992
SUPFAM:SSF103486 GeneTree:ENSGT00390000002200 HOVERGEN:HBG018065
OrthoDB:EOG4T4CVN GO:GO:0016471 CTD:245972 OMA:FFTYMTC
EMBL:AY145896 EMBL:AB088358 EMBL:AY517482 EMBL:AK075745
EMBL:AK089507 EMBL:AK170072 EMBL:AK170405 EMBL:AK170578
EMBL:AK170659 EMBL:AL773599 EMBL:BC087899 IPI:IPI00340503
RefSeq:NP_780615.2 UniGene:Mm.19298 ProteinModelPortal:Q80SY3
STRING:Q80SY3 PhosphoSite:Q80SY3 PRIDE:Q80SY3
Ensembl:ENSMUST00000029900 GeneID:242341 KEGG:mmu:242341
UCSC:uc008sch.2 InParanoid:Q80SY3 ChiTaRS:ATP6V0D2 NextBio:385305
Bgee:Q80SY3 CleanEx:MM_ATP6V0D2 Genevestigator:Q80SY3
Uniprot:Q80SY3
Length = 350
Score = 141 (54.7 bits), Expect = 7.1e-07, P = 7.1e-07
Identities = 27/40 (67%), Positives = 32/40 (80%)
Query: 117 FNVDGGYLEGLCRGFKNGILKQTDYLNLVQCESLEELEDH 156
FNVD GYLEGL RG K +L Q DY+NLVQCE+LE+L+ H
Sbjct: 9 FNVDHGYLEGLVRGCKASLLTQQDYVNLVQCETLEDLKIH 48
>RGD|1306900 [details] [associations]
symbol:Atp6v0d2 "ATPase, H+ transporting, lysosomal V0 subunit
D2" species:10116 "Rattus norvegicus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005768 "endosome"
evidence=IDA] [GO:0005769 "early endosome" evidence=IEA;ISO]
[GO:0008150 "biological_process" evidence=ND] [GO:0015078 "hydrogen
ion transmembrane transporter activity" evidence=IEA] [GO:0015991
"ATP hydrolysis coupled proton transport" evidence=IEA] [GO:0016020
"membrane" evidence=ISO] [GO:0016324 "apical plasma membrane"
evidence=ISO;ISS;IDA] [GO:0016471 "vacuolar proton-transporting
V-type ATPase complex" evidence=IEA;ISO] [GO:0033179
"proton-transporting V-type ATPase, V0 domain" evidence=IEA]
InterPro:IPR016727 PIRSF:PIRSF018497 InterPro:IPR002843 RGD:1306900
GO:GO:0016324 GO:GO:0005768 GO:GO:0005769 GO:GO:0015991
GO:GO:0015078 KO:K02146 eggNOG:COG1527 HOGENOM:HOG000199065
GO:GO:0033179 PANTHER:PTHR11028 Pfam:PF01992 SUPFAM:SSF103486
GeneTree:ENSGT00390000002200 HOVERGEN:HBG018065 OrthoDB:EOG4T4CVN
GO:GO:0016471 CTD:245972 OMA:FFTYMTC EMBL:BC089917 IPI:IPI00364821
RefSeq:NP_001011972.1 UniGene:Rn.83540 ProteinModelPortal:Q5FVL0
STRING:Q5FVL0 PRIDE:Q5FVL0 Ensembl:ENSRNOT00000009334 GeneID:297932
KEGG:rno:297932 UCSC:RGD:1306900 InParanoid:Q5FVL0 NextBio:642854
Genevestigator:Q5FVL0 Uniprot:Q5FVL0
Length = 350
Score = 141 (54.7 bits), Expect = 7.1e-07, P = 7.1e-07
Identities = 27/40 (67%), Positives = 32/40 (80%)
Query: 117 FNVDGGYLEGLCRGFKNGILKQTDYLNLVQCESLEELEDH 156
FNVD GYLEGL RG K +L Q DY+NLVQCE+LE+L+ H
Sbjct: 9 FNVDHGYLEGLVRGCKASLLTQQDYVNLVQCETLEDLKIH 48
>UNIPROTKB|Q2KJB6 [details] [associations]
symbol:ATP6V0D2 "V-type proton ATPase subunit d 2"
species:9913 "Bos taurus" [GO:0016324 "apical plasma membrane"
evidence=ISS] [GO:0016471 "vacuolar proton-transporting V-type
ATPase complex" evidence=IEA] [GO:0005769 "early endosome"
evidence=IEA] [GO:0033179 "proton-transporting V-type ATPase, V0
domain" evidence=IEA] [GO:0015991 "ATP hydrolysis coupled proton
transport" evidence=IEA] [GO:0015078 "hydrogen ion transmembrane
transporter activity" evidence=IEA] InterPro:IPR016727
PIRSF:PIRSF018497 InterPro:IPR002843 GO:GO:0016324 GO:GO:0005769
GO:GO:0015991 GO:GO:0015078 KO:K02146 eggNOG:COG1527
HOGENOM:HOG000199065 GO:GO:0033179 PANTHER:PTHR11028 Pfam:PF01992
SUPFAM:SSF103486 GeneTree:ENSGT00390000002200 HOVERGEN:HBG018065
OrthoDB:EOG4T4CVN GO:GO:0016471 EMBL:BC105425 IPI:IPI00685190
RefSeq:NP_001039566.1 UniGene:Bt.10174 ProteinModelPortal:Q2KJB6
STRING:Q2KJB6 PRIDE:Q2KJB6 Ensembl:ENSBTAT00000028091 GeneID:511839
KEGG:bta:511839 CTD:245972 InParanoid:Q2KJB6 OMA:FFTYMTC
NextBio:20870123 Uniprot:Q2KJB6
Length = 351
Score = 139 (54.0 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 26/40 (65%), Positives = 32/40 (80%)
Query: 117 FNVDGGYLEGLCRGFKNGILKQTDYLNLVQCESLEELEDH 156
FN D GYLEGL RG K G+L + DY+NLVQCE+LE+L+ H
Sbjct: 9 FNADHGYLEGLVRGCKAGLLTRRDYVNLVQCENLEDLKIH 48
>UNIPROTKB|E2RTF2 [details] [associations]
symbol:ATP6V0D2 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0016471 "vacuolar proton-transporting
V-type ATPase complex" evidence=IEA] [GO:0005769 "early endosome"
evidence=IEA] [GO:0033179 "proton-transporting V-type ATPase, V0
domain" evidence=IEA] [GO:0015991 "ATP hydrolysis coupled proton
transport" evidence=IEA] [GO:0015078 "hydrogen ion transmembrane
transporter activity" evidence=IEA] InterPro:IPR016727
PIRSF:PIRSF018497 InterPro:IPR002843 GO:GO:0005769 GO:GO:0015991
GO:GO:0015078 KO:K02146 GO:GO:0033179 PANTHER:PTHR11028
Pfam:PF01992 SUPFAM:SSF103486 GeneTree:ENSGT00390000002200
GO:GO:0016471 CTD:245972 OMA:FFTYMTC EMBL:AAEX03015920
RefSeq:XP_535118.2 UniGene:Cfa.14066 ProteinModelPortal:E2RTF2
Ensembl:ENSCAFT00000013922 GeneID:477929 KEGG:cfa:477929
NextBio:20853330 Uniprot:E2RTF2
Length = 351
Score = 139 (54.0 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 26/40 (65%), Positives = 32/40 (80%)
Query: 117 FNVDGGYLEGLCRGFKNGILKQTDYLNLVQCESLEELEDH 156
FNVD GYLEGL RG K +L Q DY+NLVQCE+LE+++ H
Sbjct: 9 FNVDHGYLEGLVRGCKASLLTQQDYINLVQCETLEDVKIH 48
>DICTYBASE|DDB_G0273657 [details] [associations]
symbol:vatD-2 "vacuolar ATPase subunit D"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0033179 "proton-transporting V-type
ATPase, V0 domain" evidence=IEA] [GO:0015991 "ATP hydrolysis
coupled proton transport" evidence=IEA] [GO:0015078 "hydrogen ion
transmembrane transporter activity" evidence=IEA] [GO:0015992
"proton transport" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR016727
PIRSF:PIRSF018497 dictyBase:DDB_G0273657 dictyBase:DDB_G0273071
InterPro:IPR002843 GO:GO:0045335 GenomeReviews:CM000151_GR
EMBL:AAFI02000011 EMBL:AAFI02000009 GO:GO:0015991 GO:GO:0015078
KO:K02146 eggNOG:COG1527 OMA:TWIAECI GO:GO:0033179
PANTHER:PTHR11028 Pfam:PF01992 SUPFAM:SSF103486 EMBL:U13150
PIR:A55016 RefSeq:XP_644445.1 RefSeq:XP_644805.1
ProteinModelPortal:P54641 STRING:P54641 PRIDE:P54641
EnsemblProtists:DDB0185227 EnsemblProtists:DDB0304844
GeneID:8618907 GeneID:8619070 KEGG:ddi:DDB_G0273071
KEGG:ddi:DDB_G0273657 ProtClustDB:CLSZ2428940 Uniprot:P54641
Length = 356
Score = 135 (52.6 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 24/41 (58%), Positives = 31/41 (75%)
Query: 116 TFNVDGGYLEGLCRGFKNGILKQTDYLNLVQCESLEELEDH 156
TFN D GYLE + RGFK GIL + DY NL QC++LE+++ H
Sbjct: 14 TFNKDDGYLEAILRGFKKGILSRADYNNLCQCDNLEDMKMH 54
>DICTYBASE|DDB_G0273071 [details] [associations]
symbol:vatD-1 "vacuolar ATPase subunit D"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0033179 "proton-transporting V-type
ATPase, V0 domain" evidence=IEA] [GO:0015991 "ATP hydrolysis
coupled proton transport" evidence=IEA] [GO:0015078 "hydrogen ion
transmembrane transporter activity" evidence=IEA] [GO:0015992
"proton transport" evidence=IEA] [GO:0006811 "ion transport"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR016727
PIRSF:PIRSF018497 dictyBase:DDB_G0273657 dictyBase:DDB_G0273071
InterPro:IPR002843 GO:GO:0045335 GenomeReviews:CM000151_GR
EMBL:AAFI02000011 EMBL:AAFI02000009 GO:GO:0015991 GO:GO:0015078
KO:K02146 eggNOG:COG1527 OMA:TWIAECI GO:GO:0033179
PANTHER:PTHR11028 Pfam:PF01992 SUPFAM:SSF103486 EMBL:U13150
PIR:A55016 RefSeq:XP_644445.1 RefSeq:XP_644805.1
ProteinModelPortal:P54641 STRING:P54641 PRIDE:P54641
EnsemblProtists:DDB0185227 EnsemblProtists:DDB0304844
GeneID:8618907 GeneID:8619070 KEGG:ddi:DDB_G0273071
KEGG:ddi:DDB_G0273657 ProtClustDB:CLSZ2428940 Uniprot:P54641
Length = 356
Score = 135 (52.6 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 24/41 (58%), Positives = 31/41 (75%)
Query: 116 TFNVDGGYLEGLCRGFKNGILKQTDYLNLVQCESLEELEDH 156
TFN D GYLE + RGFK GIL + DY NL QC++LE+++ H
Sbjct: 14 TFNKDDGYLEAILRGFKKGILSRADYNNLCQCDNLEDMKMH 54
>SGD|S000004439 [details] [associations]
symbol:VMA6 "Subunit d of the V0 integral membrane domain of
V-ATPase" species:4932 "Saccharomyces cerevisiae" [GO:0005773
"vacuole" evidence=IEA] [GO:0000329 "fungal-type vacuole membrane"
evidence=IDA] [GO:0006811 "ion transport" evidence=IEA] [GO:0015992
"proton transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0015078 "hydrogen ion transmembrane transporter
activity" evidence=IEA] [GO:0015991 "ATP hydrolysis coupled proton
transport" evidence=IEA] [GO:0005774 "vacuolar membrane"
evidence=IEA] [GO:0033179 "proton-transporting V-type ATPase, V0
domain" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=ISM] [GO:0046961 "proton-transporting ATPase activity,
rotational mechanism" evidence=IMP;IDA] [GO:0000220 "vacuolar
proton-transporting V-type ATPase, V0 domain" evidence=TAS]
[GO:0007034 "vacuolar transport" evidence=IMP;IDA] [GO:0007035
"vacuolar acidification" evidence=TAS] [GO:0006810 "transport"
evidence=IEA] InterPro:IPR016727 PIRSF:PIRSF018497 SGD:S000004439
InterPro:IPR002843 GO:GO:0016021 EMBL:BK006945 GO:GO:0007034
GO:GO:0000329 GO:GO:0015991 GO:GO:0046961 GO:GO:0007035 EMBL:U22382
KO:K14826 RefSeq:NP_013554.3 GeneID:851170 KEGG:sce:YLR449W
RefSeq:NP_013552.3 GeneID:851168 KEGG:sce:YLR447C KO:K02146
GO:GO:0000220 eggNOG:COG1527 HOGENOM:HOG000199065 OMA:TWIAECI
PANTHER:PTHR11028 Pfam:PF01992 SUPFAM:SSF103486
GeneTree:ENSGT00390000002200 OrthoDB:EOG4HX88T EMBL:L11584
PIR:S55969 ProteinModelPortal:P32366 DIP:DIP-1737N IntAct:P32366
MINT:MINT-386520 STRING:P32366 TCDB:3.A.2.2.3 PaxDb:P32366
PeptideAtlas:P32366 EnsemblFungi:YLR447C CYGD:YLR447c
NextBio:967972 Genevestigator:P32366 GermOnline:YLR447C
Uniprot:P32366
Length = 345
Score = 132 (51.5 bits), Expect = 7.2e-06, P = 7.2e-06
Identities = 20/41 (48%), Positives = 32/41 (78%)
Query: 114 GCTFNVDGGYLEGLCRGFKNGILKQTDYLNLVQCESLEELE 154
G FN+D G++EG+ RG++NG+L Y+NL QC++LE+L+
Sbjct: 3 GVYFNIDNGFIEGVVRGYRNGLLSNNQYINLTQCDTLEDLK 43
>CGD|CAL0004857 [details] [associations]
symbol:orf19.364 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0000329 "fungal-type vacuole membrane"
evidence=IEA] [GO:0046961 "proton-transporting ATPase activity,
rotational mechanism" evidence=IEA] [GO:0007034 "vacuolar
transport" evidence=IEA] InterPro:IPR016727 PIRSF:PIRSF018497
CGD:CAL0004857 InterPro:IPR002843 GO:GO:0015991 GO:GO:0015078
KO:K02146 eggNOG:COG1527 GO:GO:0033179 PANTHER:PTHR11028
Pfam:PF01992 SUPFAM:SSF103486 EMBL:AACQ01000280 RefSeq:XP_710332.1
ProteinModelPortal:Q59KS7 STRING:Q59KS7 GeneID:3648053
KEGG:cal:CaO19.364 Uniprot:Q59KS7
Length = 348
Score = 131 (51.2 bits), Expect = 9.5e-06, P = 9.5e-06
Identities = 22/41 (53%), Positives = 32/41 (78%)
Query: 114 GCTFNVDGGYLEGLCRGFKNGILKQTDYLNLVQCESLEELE 154
G FN+D GYLEG+ RG+K+G+L Y+NL QC++LE+L+
Sbjct: 3 GLFFNIDYGYLEGVVRGYKSGLLTSNQYVNLTQCDNLEDLK 43
>TAIR|locus:2095482 [details] [associations]
symbol:AT3G28710 species:3702 "Arabidopsis thaliana"
[GO:0015078 "hydrogen ion transmembrane transporter activity"
evidence=IEA] [GO:0015991 "ATP hydrolysis coupled proton transport"
evidence=IEA] [GO:0015992 "proton transport" evidence=ISS]
[GO:0033177 "proton-transporting two-sector ATPase complex,
proton-transporting domain" evidence=IEA] [GO:0033179
"proton-transporting V-type ATPase, V0 domain" evidence=IEA]
[GO:0046961 "proton-transporting ATPase activity, rotational
mechanism" evidence=ISS] [GO:0005773 "vacuole" evidence=IDA]
[GO:0000325 "plant-type vacuole" evidence=IDA] [GO:0005774
"vacuolar membrane" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0009506 "plasmodesma" evidence=IDA] [GO:0005794
"Golgi apparatus" evidence=IDA] InterPro:IPR016727
PIRSF:PIRSF018497 InterPro:IPR002843 GO:GO:0005886 GO:GO:0009506
GO:GO:0005794 GO:GO:0005774 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0000325 GO:GO:0015991 GO:GO:0015078 KO:K02146 EMBL:AP000420
EMBL:AY039864 EMBL:AY077656 EMBL:AY142622 IPI:IPI00535838
RefSeq:NP_189512.1 UniGene:At.24667 ProteinModelPortal:Q9LJI5
STRING:Q9LJI5 PaxDb:Q9LJI5 PRIDE:Q9LJI5 EnsemblPlants:AT3G28710.1
GeneID:822502 KEGG:ath:AT3G28710 TAIR:At3g28710 eggNOG:COG1527
HOGENOM:HOG000199065 InParanoid:Q9LJI5 OMA:TWIAECI PhylomeDB:Q9LJI5
ProtClustDB:CLSN2684324 Genevestigator:Q9LJI5 GermOnline:AT3G28710
GO:GO:0033179 PANTHER:PTHR11028 Pfam:PF01992 SUPFAM:SSF103486
Uniprot:Q9LJI5
Length = 351
Score = 123 (48.4 bits), Expect = 7.6e-05, P = 7.6e-05
Identities = 21/41 (51%), Positives = 30/41 (73%)
Query: 116 TFNVDGGYLEGLCRGFKNGILKQTDYLNLVQCESLEELEDH 156
TFN+ GGYLE + RG + G+L DY NL QCE+L++++ H
Sbjct: 8 TFNIHGGYLEAIVRGHRAGLLTTADYNNLCQCENLDDIKMH 48
>TAIR|locus:2095492 [details] [associations]
symbol:AT3G28715 species:3702 "Arabidopsis thaliana"
[GO:0015078 "hydrogen ion transmembrane transporter activity"
evidence=IEA] [GO:0015991 "ATP hydrolysis coupled proton transport"
evidence=IEA] [GO:0015992 "proton transport" evidence=ISS]
[GO:0033177 "proton-transporting two-sector ATPase complex,
proton-transporting domain" evidence=IEA] [GO:0033179
"proton-transporting V-type ATPase, V0 domain" evidence=IEA]
[GO:0046961 "proton-transporting ATPase activity, rotational
mechanism" evidence=ISS] [GO:0005773 "vacuole" evidence=IDA]
[GO:0005774 "vacuolar membrane" evidence=IDA] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] InterPro:IPR016727 PIRSF:PIRSF018497
InterPro:IPR002843 GO:GO:0009506 GO:GO:0005794 GO:GO:0005774
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0015991 GO:GO:0015078
KO:K02146 EMBL:AP000420 EMBL:AP002057 eggNOG:COG1527
HOGENOM:HOG000199065 ProtClustDB:CLSN2684324 GO:GO:0033179
PANTHER:PTHR11028 Pfam:PF01992 SUPFAM:SSF103486 EMBL:AF428348
EMBL:AY062635 EMBL:BT000154 IPI:IPI00528468 RefSeq:NP_189513.1
UniGene:At.23331 ProteinModelPortal:Q9LHA4 IntAct:Q9LHA4
STRING:Q9LHA4 PaxDb:Q9LHA4 PRIDE:Q9LHA4 EnsemblPlants:AT3G28715.1
GeneID:822503 KEGG:ath:AT3G28715 TAIR:At3g28715 InParanoid:Q9LHA4
OMA:FRNHAFE PhylomeDB:Q9LHA4 Genevestigator:Q9LHA4
GermOnline:AT3G28715 Uniprot:Q9LHA4
Length = 351
Score = 123 (48.4 bits), Expect = 7.6e-05, P = 7.6e-05
Identities = 21/41 (51%), Positives = 30/41 (73%)
Query: 116 TFNVDGGYLEGLCRGFKNGILKQTDYLNLVQCESLEELEDH 156
TFN+ GGYLE + RG + G+L DY NL QCE+L++++ H
Sbjct: 8 TFNIHGGYLEAIVRGHRAGLLTTADYNNLCQCENLDDIKMH 48
>UNIPROTKB|E5RHJ7 [details] [associations]
symbol:ATP6V0D2 "V-type proton ATPase subunit d 2"
species:9606 "Homo sapiens" [GO:0015078 "hydrogen ion transmembrane
transporter activity" evidence=IEA] [GO:0015991 "ATP hydrolysis
coupled proton transport" evidence=IEA] [GO:0033179
"proton-transporting V-type ATPase, V0 domain" evidence=IEA]
[GO:0005769 "early endosome" evidence=IEA] InterPro:IPR016727
GO:GO:0016324 GO:GO:0005769 GO:GO:0015991 GO:GO:0015078
GO:GO:0033179 PANTHER:PTHR11028 HGNC:HGNC:18266 EMBL:AC023194
EMBL:AC084128 IPI:IPI00979549 Ensembl:ENST00000521564
ArrayExpress:E5RHJ7 Bgee:E5RHJ7 Uniprot:E5RHJ7
Length = 36
Score = 97 (39.2 bits), Expect = 0.00028, P = 0.00028
Identities = 19/28 (67%), Positives = 21/28 (75%)
Query: 117 FNVDGGYLEGLCRGFKNGILKQTDYLNL 144
FNVD GYLEGL RG K +L Q DY+NL
Sbjct: 9 FNVDHGYLEGLVRGCKASLLTQQDYINL 36
>ASPGD|ASPL0000034546 [details] [associations]
symbol:AN3168 species:162425 "Emericella nidulans"
[GO:0033179 "proton-transporting V-type ATPase, V0 domain"
evidence=IEA] [GO:0015991 "ATP hydrolysis coupled proton transport"
evidence=IEA] [GO:0035690 "cellular response to drug" evidence=IEA]
[GO:0007034 "vacuolar transport" evidence=IEA] [GO:0030436 "asexual
sporulation" evidence=IEA] [GO:0046961 "proton-transporting ATPase
activity, rotational mechanism" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000329 "fungal-type vacuole membrane"
evidence=IEA] InterPro:IPR016727 PIRSF:PIRSF018497
InterPro:IPR002843 EMBL:BN001306 GO:GO:0000329 EMBL:AACD01000051
GO:GO:0015991 GO:GO:0015078 KO:K02146 eggNOG:COG1527
HOGENOM:HOG000199065 OMA:TWIAECI GO:GO:0033179 PANTHER:PTHR11028
Pfam:PF01992 SUPFAM:SSF103486 OrthoDB:EOG4HX88T RefSeq:XP_660772.1
ProteinModelPortal:Q5B8G2 STRING:Q5B8G2
EnsemblFungi:CADANIAT00009902 GeneID:2873783 KEGG:ani:AN3168.2
Uniprot:Q5B8G2
Length = 362
Score = 114 (45.2 bits), Expect = 0.00082, P = 0.00082
Identities = 18/41 (43%), Positives = 30/41 (73%)
Query: 114 GCTFNVDGGYLEGLCRGFKNGILKQTDYLNLVQCESLEELE 154
G FNV+ GY+EG+ RG++N +L Y NL QCE++++++
Sbjct: 3 GLFFNVNSGYIEGIVRGYRNSLLNGQHYSNLTQCETIDDVK 43
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.135 0.394 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 391 370 0.00086 117 3 11 22 0.41 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 46
No. of states in DFA: 607 (65 KB)
Total size of DFA: 237 KB (2129 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 30.11u 0.12s 30.23t Elapsed: 00:00:14
Total cpu time: 30.12u 0.12s 30.24t Elapsed: 00:00:15
Start: Thu Aug 15 15:47:25 2013 End: Thu Aug 15 15:47:40 2013