RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy12605
(845 letters)
>d1wa5b_ a.118.1.1 (B:) Karyopherin alpha {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 503
Score = 243 bits (619), Expect = 6e-72
Identities = 187/464 (40%), Positives = 253/464 (54%), Gaps = 45/464 (9%)
Query: 1 MRRRRNEVTVELRKNKREETLQKRRNVPLADSTDEDDIEKMAQVNLDML----------- 49
+RRRR+ VELRK KR+E L KRRN + D E + V+ D
Sbjct: 21 LRRRRDTQQVELRKAKRDEALAKRRNFIPPTDGADSDEEDESSVSADQQFYSQLQQELPQ 80
Query: 50 VVEAARKDNPELQLLAVQSARKLLSSDKNPPIEALIHSGILPVLVECLERSDRPNLQFEA 109
+ + D+ + QL A R++LS + PPI+ +I +G++P LVE + + LQ EA
Sbjct: 81 MTQQLNSDDMQEQLSATVKFRQILSREHRPPIDVVIQAGVVPRLVEFMRENQPEMLQLEA 140
Query: 110 AWALTNIASGTSAQTQEVVAAGAVPLFLRLLMSPHSNVCEQAVWALGNIIGDGPQLRDYV 169
AWALTNIASGTSAQT+ VV A AVPLF++LL + V EQA+WALGN+ GD RDYV
Sbjct: 141 AWALTNIASGTSAQTKVVVDADAVPLFIQLLYTGSVEVKEQAIWALGNVAGDSTDYRDYV 200
Query: 170 INMGVVPPLLSFIKPDIPISFLRNVTWVIVNLCRNKDPPPSMSTIIELLPALNILIHHHD 229
+ + P+L + P S +R TW + NLCR K P P S + + LP L LI+ D
Sbjct: 201 LQCNAMEPILGLFNSNKP-SLIRTATWTLSNLCRGKKPQPDWSVVSQALPTLAKLIYSMD 259
Query: 230 TSVSIYLWLSIIEKNPQISKILVSKMKILVDTVWALSYLTDGGNDQIQMVIDSGVVPSLI 289
T + LVD WA+SYL+DG + IQ VID + L+
Sbjct: 260 T-------------------------ETLVDACWAISYLSDGPQEAIQAVIDVRIPKRLV 294
Query: 290 PLLSHKEVKVQTASLRAVGNIVTGTDEQTQVILNCDALSHFPALLTHPKEKICKEAVWFL 349
LLSH+ VQT +LRAVGNIVTG D QTQV++N L LL+ PKE I KEA W +
Sbjct: 295 ELLSHESTLVQTPALRAVGNIVTGNDLQTQVVINAGVLPALRLLLSSPKENIKKEACWTI 354
Query: 350 SNITAGNQAQVQAVIDAGLLPKIIANLQKVGRIVLRPNLQFEAAWALTNIASGTSAQTQE 409
SNITAGN Q+QAVIDA L+P ++ L+ + EA WA++N +SG +
Sbjct: 355 SNITAGNTEQIQAVIDANLIPPLVKLLEVA-----EYKTKKEACWAISNASSGGLQRPDI 409
Query: 410 V---VAAGAVPLFLRLLMSPHSNVCEQAVWALGNIIGDGPQLRD 450
+ V+ G + LL + + E + AL NI+ G ++
Sbjct: 410 IRYLVSQGCIKPLCDLLEIADNRIIEVTLDALENILKMGEADKE 453
Score = 194 bits (494), Expect = 1e-54
Identities = 150/489 (30%), Positives = 215/489 (43%), Gaps = 86/489 (17%)
Query: 339 EKICKEAVWFLSNITAGNQAQVQAVIDAGLLPKIIANLQKVGRIVLRPNLQFEAAWALTN 398
++ V F ++ ++ + VI AG++P+++ +++ LQ EAAWALTN
Sbjct: 91 QEQLSATVKFRQILSREHRPPIDVVIQAGVVPRLVEFMRENQP----EMLQLEAAWALTN 146
Query: 399 IASGTSAQTQEVVAAGAVPLFLRLLMSPHSNVCEQAVWALGNIIGDGPQLRDYVINMGVV 458
IASGTSAQT+ VV A AVPLF++LL + V EQA+WALGN+ GD RDYV+ +
Sbjct: 147 IASGTSAQTKVVVDADAVPLFIQLLYTGSVEVKEQAIWALGNVAGDSTDYRDYVLQCNAM 206
Query: 459 PPLLSFIKPDIPISFLRNVTWVIVNLCRNKDPPPSMSTIIELLPALNILIHHHDTSVSIY 518
P+L + P S +R TW + NLCR K P P S + + LP L LI+ DT
Sbjct: 207 EPILGLFNSNKP-SLIRTATWTLSNLCRGKKPQPDWSVVSQALPTLAKLIYSMDTET--- 262
Query: 519 LWLSIIEKNPQISKILVSKMKVCSRYLYYLSHNSGPMSCQKKQHSIYMCVSPGTDEQTQV 578
+ C Y + V +
Sbjct: 263 ------------------LVDACWAISYLSDGPQEAIQAVIDVRIPKRLVELLS------ 298
Query: 579 ILNCDALSHFPALLTHPKEKICKEAVWFLSNITAGNQAQVQAVIDAGLLPKIIANLQKRS 638
H + A+ + NI GN Q Q VI+AG+LP + L
Sbjct: 299 ---------------HESTLVQTPALRAVGNIVTGNDLQTQVVINAGVLPALRLLLSSPK 343
Query: 639 CKILNKYLDN-NNMVLHNVLLQMSVFLQNVEERMIYSSFQKTSPLRVAATGGFTLFAFIS 697
I + +N+ N +V N+ ++
Sbjct: 344 ENIKKEACWTISNITAGNTEQIQAVIDANLIPPLV------------------------- 378
Query: 698 RFQLMFFPQGEFQTQKEAAWAISNLTISG--NRDQVAKLVQEGVIPPFCDLLSCKDAQVI 755
E++T+KEA WAISN + G D + LV +G I P CDLL D ++I
Sbjct: 379 ----KLLEVAEYKTKKEACWAISNASSGGLQRPDIIRYLVSQGCIKPLCDLLEIADNRII 434
Query: 756 QVVLDGINNMLKMADAQVET-------LANMIEECGGLDKIEMLQNHENVEIYKLAYDII 808
+V LD + N+LKM +A E A+ IE+ GG++KI Q +EN +IY+ AY II
Sbjct: 435 EVTLDALENILKMGEADKEARGLNINENADFIEKAGGMEKIFNCQQNENDKIYEKAYKII 494
Query: 809 ERYFSEVED 817
E YF E ED
Sbjct: 495 ETYFGEEED 503
>d1q1sc_ a.118.1.1 (C:) Importin alpha {Mouse (Mus musculus) [TaxId:
10090]}
Length = 434
Score = 186 bits (473), Expect = 2e-52
Identities = 179/406 (44%), Positives = 251/406 (61%), Gaps = 35/406 (8%)
Query: 50 VVEAARKDNPELQLLAVQSARKLLSSDKNPPIEALIHSGILPVLVECLERSDRPNLQFEA 109
+V+ +N E QL A Q+ARKLLS +K PPI+ +I +G++P V L ++D +QFE+
Sbjct: 18 IVKGINSNNLESQLQATQAARKLLSREKQPPIDNIIRAGLIPKFVSFLGKTDCSPIQFES 77
Query: 110 AWALTNIASGTSAQTQEVVAAGAVPLFLRLLMSPHSNVCEQAVWALGNIIGDGPQLRDYV 169
AWALTNIASGTS QT+ VV GA+P F+ LL SPH+++ EQAVWALGNI GDG RD V
Sbjct: 78 AWALTNIASGTSEQTKAVVDGGAIPAFISLLASPHAHISEQAVWALGNIAGDGSAFRDLV 137
Query: 170 INMGVVPPLLSFIK----PDIPISFLRNVTWVIVNLCRNKDPPPSMSTIIELLPALNILI 225
I G + PLL+ + + +LRN+TW + NLCRNK+P P + + ++LP L L+
Sbjct: 138 IKHGAIDPLLALLAVPDLSTLACGYLRNLTWTLSNLCRNKNPAPPLDAVEQILPTLVRLL 197
Query: 226 HHHDTSVSIYLWLSIIEKNPQISKILVSKMKILVDTVWALSYLTDGGNDQIQMVIDSGVV 285
HH+D ++L D+ WA+SYLTDG N++I+MV+ GVV
Sbjct: 198 HHND-------------------------PEVLADSCWAISYLTDGPNERIEMVVKKGVV 232
Query: 286 PSLIPLLSHKEVKVQTASLRAVGNIVTGTDEQTQVILNCDALSHFPALLTHPKEKICKEA 345
P L+ LL E+ + T +LRA+GNIVTGTDEQTQ +++ AL+ FP+LLT+PK I KEA
Sbjct: 233 PQLVKLLGATELPIVTPALRAIGNIVTGTDEQTQKVIDAGALAVFPSLLTNPKTNIQKEA 292
Query: 346 VWFLSNITAGNQAQVQAVIDAGLLPKIIANLQKVGRIVLRPNLQFEAAWALTNIAS-GTS 404
W +SNITAG Q Q+Q V++ GL+P ++ L K Q EAAWA+TN S GT
Sbjct: 293 TWTMSNITAGRQDQIQQVVNHGLVPFLVGVLSKA-----DFKTQKEAAWAITNYTSGGTV 347
Query: 405 AQTQEVVAAGAVPLFLRLLMSPHSNVCEQAVWALGNIIGDGPQLRD 450
Q +V G + + LL + + + + + A+ NI +L +
Sbjct: 348 EQIVYLVHCGIIEPLMNLLSAKDTKIIQVILDAISNIFQAAEKLGE 393
Score = 182 bits (461), Expect = 1e-50
Identities = 157/489 (32%), Positives = 230/489 (47%), Gaps = 81/489 (16%)
Query: 332 ALLTHPKEKICKEAVWFLSNITA-GNQAQVQAVIDAGLLPKIIANLQKVGRIVLRPNLQF 390
+ + +A + + Q + +I AGL+PK ++ L K +QF
Sbjct: 20 KGINSNNLESQLQATQAARKLLSREKQPPIDNIIRAGLIPKFVSFLGKTDC----SPIQF 75
Query: 391 EAAWALTNIASGTSAQTQEVVAAGAVPLFLRLLMSPHSNVCEQAVWALGNIIGDGPQLRD 450
E+AWALTNIASGTS QT+ VV GA+P F+ LL SPH+++ EQAVWALGNI GDG RD
Sbjct: 76 ESAWALTNIASGTSEQTKAVVDGGAIPAFISLLASPHAHISEQAVWALGNIAGDGSAFRD 135
Query: 451 YVINMGVVPPLLSFIK----PDIPISFLRNVTWVIVNLCRNKDPPPSMSTIIELLPALNI 506
VI G + PLL+ + + +LRN+TW + NLCRNK+P P + + ++LP L
Sbjct: 136 LVIKHGAIDPLLALLAVPDLSTLACGYLRNLTWTLSNLCRNKNPAPPLDAVEQILPTLVR 195
Query: 507 LIHHHDTSVSIYLWLSIIEKNPQISKILVSKMKVCSRYLYYLSHNSGPMSCQKKQHSIYM 566
L+HH+D
Sbjct: 196 LLHHND------------------------------------------PEVLADSCWAIS 213
Query: 567 CVSPGTDEQTQVILNCDALSHFPALLTHPKEKICKEAVWFLSNITAGNQAQVQAVIDAGL 626
++ G +E+ ++++ + LL + I A+ + NI G Q Q VIDAG
Sbjct: 214 YLTDGPNERIEMVVKKGVVPQLVKLLGATELPIVTPALRAIGNIVTGTDEQTQKVIDAGA 273
Query: 627 LPKIIANLQKRSCKILNKYLDNNNMVLHNVLLQMSVFLQNVEERMIYSSFQKTSPLRVAA 686
L + L I ++ ++ + L
Sbjct: 274 LAVFPSLLTNPKTNI----------QKEATWTMSNITAGRQDQIQQVVNHGLVPFL---- 319
Query: 687 TGGFTLFAFISRFQLMFFPQGEFQTQKEAAWAISNLTISGNRDQVAKLVQEGVIPPFCDL 746
+ + +F+TQKEAAWAI+N T G +Q+ LV G+I P +L
Sbjct: 320 --------------VGVLSKADFKTQKEAAWAITNYTSGGTVEQIVYLVHCGIIEPLMNL 365
Query: 747 LSCKDAQVIQVVLDGINNMLKMAD--AQVETLANMIEECGGLDKIEMLQNHENVEIYKLA 804
LS KD ++IQV+LD I+N+ + A+ + E L+ MIEECGGLDKIE LQ HEN +YK +
Sbjct: 366 LSAKDTKIIQVILDAISNIFQAAEKLGETEKLSIMIEECGGLDKIEALQRHENESVYKAS 425
Query: 805 YDIIERYFS 813
++IE+YFS
Sbjct: 426 LNLIEKYFS 434
Score = 91.0 bits (224), Expect = 7e-20
Identities = 115/379 (30%), Positives = 177/379 (46%), Gaps = 56/379 (14%)
Query: 268 LTDGGNDQIQMVIDSGVVPSLIPLLSHKEVKVQTASLRAVGNIVTGTDEQT-QVILNCDA 326
+ D G++Q + + V ++ ++ ++ Q + +A +++ + I+
Sbjct: 1 MADIGSNQGTV---NWSVEDIVKGINSNNLESQLQATQAARKLLSREKQPPIDNIIRAGL 57
Query: 327 LSHFPALLTH-PKEKICKEAVWFLSNITAGNQAQVQAVIDAGLLPKIIANLQKVGRIVLR 385
+ F + L I E+ W
Sbjct: 58 IPKFVSFLGKTDCSPIQFESAWA------------------------------------- 80
Query: 386 PNLQFEAAWALTNIASGTSAQTQEVVAAGAVPLFLRLLMSPHSNVCEQAVWALGNIIGDG 445
LTNIASGTS QT+ VV GA+P F+ LL SPH+++ EQAVWALGNI GDG
Sbjct: 81 ----------LTNIASGTSEQTKAVVDGGAIPAFISLLASPHAHISEQAVWALGNIAGDG 130
Query: 446 PQLRDYVINMGVVPPLLSFIK----PDIPISFLRNVTWVIVNLCRNKDPPPSMSTIIELL 501
RD VI G + PLL+ + + +LRN+TW + NLCRNK+P P + + ++L
Sbjct: 131 SAFRDLVIKHGAIDPLLALLAVPDLSTLACGYLRNLTWTLSNLCRNKNPAPPLDAVEQIL 190
Query: 502 PALNILIHHHDTSVSIYLWLSIIEKNPQISKILVSKMKVCSRYLYYLSHNSGPMSCQKKQ 561
P L L+HH+D V +I ++ + +K + +
Sbjct: 191 PTLVRLLHHNDPEVLADSCWAISYLTDGPNERIEMVVKKGVVPQLVKLLGATELPIVTPA 250
Query: 562 HSIYMCVSPGTDEQTQVILNCDALSHFPALLTHPKEKICKEAVWFLSNITAGNQAQVQAV 621
+ GTDEQTQ +++ AL+ FP+LLT+PK I KEA W +SNITAG Q Q+Q V
Sbjct: 251 LRAIGNIVTGTDEQTQKVIDAGALAVFPSLLTNPKTNIQKEATWTMSNITAGRQDQIQQV 310
Query: 622 IDAGLLPKIIANLQKRSCK 640
++ GL+P ++ L K K
Sbjct: 311 VNHGLVPFLVGVLSKADFK 329
Score = 37.1 bits (84), Expect = 0.009
Identities = 19/116 (16%), Positives = 38/116 (32%), Gaps = 5/116 (4%)
Query: 707 GEFQTQKEAAWAISNLTISGNRDQVAKLVQEGVIPPFCDLLSCKDAQVIQ-VVLDGINNM 765
++Q +A A L + + +++ G+IP F L D IQ + N+
Sbjct: 25 NNLESQLQATQAARKLLSREKQPPIDNIIRAGLIPKFVSFLGKTDCSPIQFESAWALTNI 84
Query: 766 LKMADAQVETLANMIEECGGLDKIEMLQNHENVEIYKLAYDIIERYFSEVEDEDNL 821
Q + + G + L + I + A + + +L
Sbjct: 85 ASGTSEQT----KAVVDGGAIPAFISLLASPHAHISEQAVWALGNIAGDGSAFRDL 136
>d1xm9a1 a.118.1.24 (A:244-700) Plakophilin 1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 457
Score = 145 bits (365), Expect = 8e-38
Identities = 61/447 (13%), Positives = 130/447 (29%), Gaps = 38/447 (8%)
Query: 89 ILPVLVECLERSDRPNLQFEAAWALTNIASGTSAQTQEVVAAGAVPLFLRLLMSPHSNVC 148
+P V+ L D Q A+ + + + Q+V G + + LL SP+ NV
Sbjct: 3 TIPKAVQYLSSQD-EKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQ 61
Query: 149 EQAVWALGNIIGDGPQLRDYVINMGVVPPLLSFIKPDIPISFLRNVTWVIVNLCRNKDPP 208
+ A AL N++ + + +S ++ + +T ++ NL +
Sbjct: 62 QAAAGALRNLVFRSTTNKLETRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDELK 121
Query: 209 PSMSTIIELLPALNILIHHHDTSVSIYLWLSIIEKNPQISKILVSKMKILVDTVWALSYL 268
+ + A ++I + ++ + L L
Sbjct: 122 EELIADALPVLADRVIIPFSGWCDGNSNMSREVV-----------DPEVFFNATGCLRNL 170
Query: 269 TDGGNDQIQMVIDSGVVPSLIPLLSHKEVKVQ--------------TASLRAVGNIVTGT 314
+ + M SG++ SL+ + + + S R + T
Sbjct: 171 SSADAGRQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMCVLHNLSYRLDAEVPTRY 230
Query: 315 DEQTQVILNCDALSHFPALLTHPKEKICKEAVWFLSNITAGNQAQVQAVIDAGLLPKIIA 374
+ N ++ +K+ N + + + +
Sbjct: 231 RQLEYNARNAYTEKSSTGCFSNKSDKMMNNNYDCPLPEEETNPKGSGWLYHSDAIRTYLN 290
Query: 375 NLQKVGRIVLRPNLQFEAAWALTNIASGTSAQTQEVVA-AGAVPLFLRLLMSPHSNVCEQ 433
+ K + + +S +Q + +P RLL S +S+V
Sbjct: 291 LMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRS 350
Query: 434 AVWALGNIIGDGPQLRDYVINMGVVPPLLSFIK-----PDIPISFLRNVTWVIVNLCRNK 488
L N+ P L V+ V P + + L + + + NL ++
Sbjct: 351 GASLLSNMSRH-PLLHR-VMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQ 408
Query: 489 DPPPSMSTIIEL--LPALNILIHHHDT 513
P L + L +
Sbjct: 409 --PQLAKQYFSSSMLNNIINLCRSSAS 433
Score = 120 bits (301), Expect = 2e-29
Identities = 52/466 (11%), Positives = 123/466 (26%), Gaps = 64/466 (13%)
Query: 386 PNLQFEAAWALTNIASGTSAQTQEVVAAGAVPLFLRLLMSPHSNVCEQAVWALGNIIGDG 445
Q A+ + + + Q+V G + + LL SP+ NV + A AL N++
Sbjct: 16 EKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRS 75
Query: 446 PQLRDYVINMGVVPPLLSFIKPDIPISFLRNVTWVIVNLCRNKDPPPSM----------- 494
+ + +S ++ + +T ++ NL + +
Sbjct: 76 TTNKLETRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDELKEELIADALPVLADR 135
Query: 495 ---STIIELLPALNILIHHHDTSVSIYLW--LSIIEKNPQISKILVSKMKVCSRYLYYLS 549
N+ D V L + + + + + + Y+
Sbjct: 136 VIIPFSGWCDGNSNMSREVVDPEVFFNATGCLRNLSSADAGRQTMRNYSGLIDSLMAYVQ 195
Query: 550 HNSGPMSCQKKQHSIYMC------------VSPGTDEQTQVILNCDALSHFPALLTHPKE 597
+ C K MC V + N ++ +
Sbjct: 196 NCVAASRCDDKSVENCMCVLHNLSYRLDAEVPTRYRQLEYNARNAYTEKSSTGCFSNKSD 255
Query: 598 KICKEAVWFLSNITAGNQAQVQAVIDAGLLPKIIANLQKRSCKILNKYLDNNNMVLHNVL 657
K+ N + + + + + K L
Sbjct: 256 KMMNNNYDCPLPEEETNPKGSGWLYHSDAIRTYLNLMGKSK----KDATLEACAGALQNL 311
Query: 658 LQMSVFLQNVEERMIYSSFQKTSPLRVAATGGFTLFAFISRFQLMFFPQGEFQTQKEAAW 717
+ + ++I + + G + A
Sbjct: 312 TASKGLMSSGMSQLIGLKEKGLPQI------------------ARLLQSGNSDVVRSGAS 353
Query: 718 AISNLTISGNRDQVAKLVQEGVIPPFCDLLSC------KDAQVIQVVLDGINNMLKMADA 771
+SN++ + +++ V P LL+ ++ + N++ A
Sbjct: 354 LLSNMSRH---PLLHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLM----A 406
Query: 772 QVETLANMIEECGGLDKI-EMLQNHENVEIYKLAYDIIERYFSEVE 816
LA L+ I + ++ + + + A ++ +S E
Sbjct: 407 SQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAARLLLSDMWSSKE 452
Score = 107 bits (267), Expect = 3e-25
Identities = 58/454 (12%), Positives = 130/454 (28%), Gaps = 58/454 (12%)
Query: 50 VVEAARKDNPELQLLAVQSARKLLSSDKNPPIEALIHSGILPVLVECLERSDRPNLQFEA 109
V+ + + Q + + + + G + LV+ L RS N+Q A
Sbjct: 7 AVQYLSSQDEKYQAIGA-YYIQHTCFQDESAKQQVYQLGGICKLVDLL-RSPNQNVQQAA 64
Query: 110 AWALTNIASGTSAQTQEVVAAGAVPLFLRLLMSPHSNVCEQAVWALGNIIGDGPQLRDYV 169
A AL N+ ++ E + + LL + ++ + L + +L++ +
Sbjct: 65 AGALRNLVFRSTTNKLETRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNLSSTDELKEEL 124
Query: 170 INMGVVPPLLSFIKPDIPISF--------------LRNVTWVIVNLCRNKDPPPSMSTII 215
I + I P N T + NL +M
Sbjct: 125 IADALPVLADRVIIPFSGWCDGNSNMSREVVDPEVFFNATGCLRNLSSADAGRQTMRNYS 184
Query: 216 ELLPALNILIHHHDTSVSI--------------------------YLWLSIIEKNPQISK 249
L+ +L + + + Y L +N K
Sbjct: 185 GLIDSLMAYVQNCVAASRCDDKSVENCMCVLHNLSYRLDAEVPTRYRQLEYNARNAYTEK 244
Query: 250 ILVSKM-----KILVDTVWALSYLTDGGNDQIQMVIDSGVVPSLIPLLSHKEVKVQTASL 304
K++ + + + S + + + L+ + +
Sbjct: 245 SSTGCFSNKSDKMMNNNYDCPLPEEETNPKGSGWLYHSDAIRTYLNLMGKSKKDATLEAC 304
Query: 305 RAVGNIVTGTDEQTQ------VILNCDALSHFPALLTHPKEKICKEAVWFLSNITAGNQA 358
+T + + L L LL + + LSN++
Sbjct: 305 AGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARLLQSGNSDVVRSGASLLSNMS--RHP 362
Query: 359 QVQAVIDAGLLPKIIANLQK-VGRIVLRPNLQFEAAWALTNIASGTSAQTQEVVAAGAVP 417
+ V+ + P++ L G ++ A + + N+ + ++ ++ +
Sbjct: 363 LLHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLAKQYFSSSMLN 422
Query: 418 LFLRLLMSPHSN-VCEQAVWALGNIIGDGPQLRD 450
+ L S S E A L ++ +L+
Sbjct: 423 NIINLCRSSASPKAAEAARLLLSDMWSS-KELQG 455
Score = 55.6 bits (132), Expect = 1e-08
Identities = 21/171 (12%), Positives = 54/171 (31%), Gaps = 13/171 (7%)
Query: 46 LDMLVVEAARKDNPELQLLAVQSARKLLSSDKNPPIE----ALIHSGILPVLVECLERSD 101
+ + + + + L +S + LP + +S
Sbjct: 285 IRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGLKEKGLPQIARL-LQSG 343
Query: 102 RPNLQFEAAWALTNIASGTSAQTQEVVAAGAVPLFLRLLMSPHSN------VCEQAVWAL 155
++ A L+N++ V+ P RLL S N + A + +
Sbjct: 344 NSDVVRSGASLLSNMSR--HPLLHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTV 401
Query: 156 GNIIGDGPQLRDYVINMGVVPPLLSFIKPDIPISFLRNVTWVIVNLCRNKD 206
N++ PQL + ++ +++ + ++ ++ +K+
Sbjct: 402 RNLMASQPQLAKQYFSSSMLNNIINLCRSSASPKAAEAARLLLSDMWSSKE 452
>d1jdha_ a.118.1.1 (A:) beta-Catenin {Human (Homo sapiens) [TaxId:
9606]}
Length = 529
Score = 93.4 bits (230), Expect = 2e-20
Identities = 64/537 (11%), Positives = 150/537 (27%), Gaps = 59/537 (10%)
Query: 273 NDQIQMVIDSGVVPSLIPLLSHKEVKVQTASLRAVGNIVTGTDEQTQVILNCDALSHFPA 332
N Q + + +P L LL+ ++ V + V + + ++ + +S
Sbjct: 7 NYQDDAELATRAIPELTKLLNDEDQVVVNKAAVMVHQLSKKEASRHAIMRSPQMVSAIVR 66
Query: 333 LLTHPKEKICKE-AVWFLSNITAGNQAQVQAVIDAGLLPKIIANLQKVGRIVLRPNLQFE 391
+ + + L N++ + A+ +G +P ++ L ++ F
Sbjct: 67 TMQNTNDVETARCTAGTLHNLSHHREGL-LAIFKSGGIPALVKMLGS-----PVDSVLFY 120
Query: 392 AAWALTNIASGTSAQTQEVVAAGAVPLFLRLLMSPHSNVCEQAVWALGNIIGDGPQLRDY 451
A L N+ V AG + + LL + L + + +
Sbjct: 121 AITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNKTNVKFLAITTDCLQILAYGNQESKLI 180
Query: 452 VINMGVVPPLLSFIKPDIPISFLRNVTWVIVNLCRNKDPPPSMSTIIELLPALNILIH-- 509
++ G L++ ++ L + V+ L P++ + L
Sbjct: 181 ILASGGPQALVNIMRTYTYEKLLWTTSRVLKVLSVCSSNKPAIVEAGGMQALGLHLTDPS 240
Query: 510 ----------------------------------HHDTSVSIYLWLSIIEKNPQISKILV 535
+++ + I N +
Sbjct: 241 QRLVQNCLWTLRNLSDAATKQEGMEGLLGTLVQLLGSDDINVVTCAAGILSNLTCNNYKN 300
Query: 536 SKMKVCSRYLYYLSHNSGPMSCQKKQHSIYMCVSPGT-------DEQTQVILNCDALSHF 588
M + L ++ +C + + L
Sbjct: 301 KMMVCQVGGIEALVRTVLRAGDREDITEPAICALRHLTSRHQEAEMAQNAVRLHYGLPVV 360
Query: 589 PALLTHPKEKICKEAVWFLSNITAGNQAQVQAVIDAGLLPKIIANLQKRSCKILNKYLDN 648
LL P +A L A A + + G +P+++ L + +
Sbjct: 361 VKLLHPPSHWPLIKATVGLIRNLALCPANHAPLREQGAIPRLVQLLVRAHQDTQRRTSMG 420
Query: 649 NNMVLHNVLLQMSVFLQNVEERMIYSSFQKTSPLRVAATGGFTLFAFISRFQLMFFPQGE 708
++M ++ + + + + + LF QL++
Sbjct: 421 GTQQQFVEGVRMEEIVEGCTGALHILARDVHNRIVIRGLNTIPLFV-----QLLY--SPI 473
Query: 709 FQTQKEAAWAISNLTISGNRDQVAKLVQEGVIPPFCDLLSCKDAQVIQVVLDGINNM 765
Q+ AA + L + +++ + EG P +LL ++ V + M
Sbjct: 474 ENIQRVAAGVLCEL--AQDKEAAEAIEAEGATAPLTELLHSRNEGVATYAAAVLFRM 528
Score = 82.6 bits (202), Expect = 5e-17
Identities = 64/518 (12%), Positives = 143/518 (27%), Gaps = 55/518 (10%)
Query: 333 LLTHPKEKICKEAVWFLSNITAGNQAQVQAVIDAGLLPKIIANLQKVGRIVLRPNLQFEA 392
LL + + +A + ++ ++ + ++ I+ +Q
Sbjct: 25 LLNDEDQVVVNKAAVMVHQLSKKEASRHAIMRSPQMVSAIVRTMQNTND----VETARCT 80
Query: 393 AWALTNIASGTSAQTQEVVAAGAVPLFLRLLMSPHSNVCEQAVWALGNIIGDGPQLRDYV 452
A L N++ + +G +P +++L SP +V A+ L N++ + V
Sbjct: 81 AGTLHNLSHHREGL-LAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAKMAV 139
Query: 453 INMGVVPPLLSFIKPDIPISFLRNVTWVIVNLCRNKDPPPSMSTIIELLPALNILIHHHD 512
G + +++ + + + N++ + +NI+ +
Sbjct: 140 RLAGGLQKMVALLNKTNVKFLAITTDCLQILAYGNQESKLIILASGGPQALVNIMRTYTY 199
Query: 513 TSVSIYL-WLSIIEKNPQISKILVSKMKVCSRYLYYLSHNSGPMSCQKKQHSIYMCVSPG 571
+ + + +K + + +L+ S + +
Sbjct: 200 EKLLWTTSRVLKVLSVCSSNKPAIVEAGGMQALGLHLTDPSQRLVQNCLWTLRNLS---- 255
Query: 572 TDEQTQVILNCDALSHFPALLTHPKEKICKEAVWFLSNITAGNQAQVQAVIDAGLLPKII 631
D T+ L LL + A LSN+T N V G + ++
Sbjct: 256 -DAATKQEGMEGLLGTLVQLLGSDDINVVTCAAGILSNLTCNNYKNKMMVCQVGGIEALV 314
Query: 632 ANLQKRSCK-------ILNKYLDNNNMVLHNVLLQMSVFLQNVEERMIYSSFQKTSPLRV 684
+ + + I + + + + PL
Sbjct: 315 RTVLRAGDREDITEPAICALRHLTSRHQEAEMAQNAVRLHYGLPVVVKLLHPPSHWPLIK 374
Query: 685 AATGGFTLFAFISRFQLMFFPQG------------EFQTQKEAAWAISNL---------- 722
A G A QG TQ+ + +
Sbjct: 375 ATVGLIRNLALCPANHAPLREQGAIPRLVQLLVRAHQDTQRRTSMGGTQQQFVEGVRMEE 434
Query: 723 ----------TISGNRDQVAKLVQEGVIPPFCDLLSCKDAQVIQVVLDGINNMLKMADAQ 772
++ + + IP F LL + +V + + AQ
Sbjct: 435 IVEGCTGALHILARDVHNRIVIRGLNTIPLFVQLLYSPIENIQRVAAGVLCEL-----AQ 489
Query: 773 VETLANMIEECGGLDKIEMLQNHENVEIYKLAYDIIER 810
+ A IE G + L + N + A ++ R
Sbjct: 490 DKEAAEAIEAEGATAPLTELLHSRNEGVATYAAAVLFR 527
Score = 79.6 bits (194), Expect = 5e-16
Identities = 71/563 (12%), Positives = 173/563 (30%), Gaps = 65/563 (11%)
Query: 82 EALIHSGILPVLVECLERSDRPNLQFEAAWALTNIASGTSAQTQEVVAAGAVPLFLRLLM 141
+A + + +P L + L + + +AA + ++ +++ + + V +R +
Sbjct: 11 DAELATRAIPELTKLL-NDEDQVVVNKAAVMVHQLSKKEASRHAIMRSPQMVSAIVRTMQ 69
Query: 142 SP-HSNVCEQAVWALGNIIGDGPQLRDYVINMGVVPPLLSFIKPDIPISFLRNVTWVIVN 200
+ L N + + + G +P L+ + + S L + N
Sbjct: 70 NTNDVETARCTAGTLHN-LSHHREGLLAIFKSGGIPALVKMLGSPVD-SVLFYAITTLHN 127
Query: 201 LCRNKDPPPSMSTIIELLPALNILIHHHDTSVSIYLWLSIIEKNPQISKILVSKMKILVD 260
L +++ + L + L++ +
Sbjct: 128 LLLHQEGAKMAVRLAGGLQKMVALLNKTNVKFLAITT----------------------- 164
Query: 261 TVWALSYLTDGGNDQIQMVIDSGVVPSLIPLLSHKEVKVQTASLRAVGNIVTGTDEQTQV 320
L L G + +++ SG +L+ ++ + + V +++
Sbjct: 165 --DCLQILAYGNQESKLIILASGGPQALVNIMRTYTYEKLLWTTSRVLKVLSVCSSNKPA 222
Query: 321 ILNCDALSHFPALLTHPKEKICKEAVWFLSNITAGNQAQVQAVIDAGLLPKIIANLQKVG 380
I+ + LT P +++ + +W L N++ Q + +
Sbjct: 223 IVEAGGMQALGLHLTDPSQRLVQNCLWTLRNLSDAATKQEGM--------EGLLGTLVQL 274
Query: 381 RIVLRPNLQFEAAWALTNIASGTSAQTQEVVAAGAVPLFLRLLMSPHSN--VCEQAVWAL 438
N+ AA L+N+ V G + +R ++ + E A+ AL
Sbjct: 275 LGSDDINVVTCAAGILSNLTCNNYKNKMMVCQVGGIEALVRTVLRAGDREDITEPAICAL 334
Query: 439 GNIIGDGPQLRDYVINM---GVVPPLLSFIKPDIPISFLRNVTWVIVNLCRNKDPPPSMS 495
++ + + +P ++ + P ++ +I N +
Sbjct: 335 RHLTSRHQEAEMAQNAVRLHYGLPVVVKLLHPPSHWPLIKATVGLIRN-LALCPANHAPL 393
Query: 496 TIIELLPALNILIHHHDTSVSIYLWLSIIEKNPQISKILVSKMKVCSRYLYYLSHNSGPM 555
+P L L+ + ++ + ++ C+ L+ L+ +
Sbjct: 394 REQGAIPRLVQLLVRAHQDTQRRTSMGGTQQQFVEGVRMEEIVEGCTGALHILARD---- 449
Query: 556 SCQKKQHSIYMCVSPGTDEQTQVILNCDALSHFPALLTHPKEKICKEAVWFLSNITAGNQ 615
VI + + F LL P E I + A L + A ++
Sbjct: 450 -----------------VHNRIVIRGLNTIPLFVQLLYSPIENIQRVAAGVLCEL-AQDK 491
Query: 616 AQVQAVIDAGLLPKIIANLQKRS 638
+A+ G + L R+
Sbjct: 492 EAAEAIEAEGATAPLTELLHSRN 514
Score = 62.6 bits (150), Expect = 1e-10
Identities = 51/450 (11%), Positives = 121/450 (26%), Gaps = 49/450 (10%)
Query: 32 STDEDDIEKMAQVNLDMLVVEAARKDNPELQLLAVQSARKLLSSDKNPPIEALIHSGILP 91
S + + + + +V+ + A+ + LL + + + G L
Sbjct: 88 SHHREGLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAKMAVRLA-GGLQ 146
Query: 92 VLVECLERSDRPNLQFEAAWALTNIASGTSAQTQEVVAAGAVPLFLRLLMSPHSNVCEQA 151
+V L +++ L +A G ++A+G + ++ +
Sbjct: 147 KMVALLNKTN-VKFLAITTDCLQILAYGNQESKLIILASGGPQALVNIMRTYTYEKLLWT 205
Query: 152 VWALGNIIGDGPQLRDYVINMGVVPPLLSFIKPDIPISFLRNVTWVIVNLCRNKDPPPSM 211
+ ++ + ++ G + L + +N W + NL M
Sbjct: 206 TSRVLKVLSVCSSNKPAIVEAGGMQALGLHLTDPSQRLV-QNCLWTLRNLSDAATKQEGM 264
Query: 212 STIIELLPALNILIHHHDTSVSIYLWLSIIEKNPQISKILVS------------------ 253
++ L L + + + + ++ N + ++
Sbjct: 265 EGLLGTLVQLLGSDDINVVTCAAGILSNLTCNNYKNKMMVCQVGGIEALVRTVLRAGDRE 324
Query: 254 -KMKILVDTVWALSYLTDGGNDQIQMVIDSGVVPSLIPLLSHKEVKVQTASLRAVGNIVT 312
+ + + L+ V +P ++ LL + + +
Sbjct: 325 DITEPAICALRHLTSRHQEAEMAQNAVRLHYGLPVVVKLLHPPSHWPLIKATVGLIRNLA 384
Query: 313 GTDEQTQVILNCDALSHFPALLTHPKEKICKEAVWFLSN--------------------- 351
+ A+ LL + + +
Sbjct: 385 LCPANHAPLREQGAIPRLVQLLVRAHQDTQRRTSMGGTQQQFVEGVRMEEIVEGCTGALH 444
Query: 352 ITAGNQAQVQAVIDAGLLPKIIANLQKVGRIVLRPNLQFEAAWALTNIASGTSAQTQEVV 411
I A + + +P + L N+Q AA L +A + +
Sbjct: 445 ILARDVHNRIVIRGLNTIPLFVQLLYSP-----IENIQRVAAGVLCELAQ-DKEAAEAIE 498
Query: 412 AAGAVPLFLRLLMSPHSNVCEQAVWALGNI 441
A GA LL S + V A L +
Sbjct: 499 AEGATAPLTELLHSRNEGVATYAAAVLFRM 528
Score = 57.6 bits (137), Expect = 4e-09
Identities = 28/132 (21%), Positives = 43/132 (32%), Gaps = 6/132 (4%)
Query: 27 VPLADSTDEDDIEKMAQVNLDMLVVEAARKDNPELQLLAVQSARKLLSSDKNPPIEALIH 86
V L +D + + VE R E+ + L N +
Sbjct: 403 VQLLVRAHQDTQRRTSMGGTQQQFVEGVR--MEEIVEGCTGALHILARDVHN--RIVIRG 458
Query: 87 SGILPVLVECLERSDRPNLQFEAAWALTNIASGTSAQTQEVVAAGAVPLFLRLLMSPHSN 146
+P+ V+ L S N+Q AA L +A + + A GA LL S +
Sbjct: 459 LNTIPLFVQLL-YSPIENIQRVAAGVLCELAQ-DKEAAEAIEAEGATAPLTELLHSRNEG 516
Query: 147 VCEQAVWALGNI 158
V A L +
Sbjct: 517 VATYAAAVLFRM 528
Score = 36.8 bits (83), Expect = 0.011
Identities = 17/86 (19%), Positives = 30/86 (34%), Gaps = 3/86 (3%)
Query: 32 STDEDDIEKMAQVNLDMLVVEAARKDNPELQLLAVQSARKLLSSDKNPPIEALIHSGILP 91
+ D + + +N L V+ +Q +A +L + EA+ G
Sbjct: 447 ARDVHNRIVIRGLNTIPLFVQLLYSPIENIQRVAAGVLCELAQDKEAA--EAIEAEGATA 504
Query: 92 VLVECLERSDRPNLQFEAAWALTNIA 117
L E L S + AA L ++
Sbjct: 505 PLTELLH-SRNEGVATYAAAVLFRMS 529
>d2vgla_ a.118.1.10 (A:) Adaptin alpha C subunit N-terminal fragment
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 584
Score = 86.8 bits (214), Expect = 4e-18
Identities = 60/446 (13%), Positives = 136/446 (30%), Gaps = 64/446 (14%)
Query: 56 KDNPELQLLAVQSARKLLSSDKNPPIEAL-------------IHSGILPVLVECLERSDR 102
N EL L + + L+S +NP L + + +
Sbjct: 95 NSNSELIRLINNAIKNDLAS-RNPTFMGLALHCIANVGSREMAEAFAGEIPKILVAGDTM 153
Query: 103 PNLQFEAAWALTNIASGTSAQTQEVVAAGAVPLFLRLLMSPHSNVCEQAVWALGNIIGDG 162
+++ AA L + V + LL H V A + +
Sbjct: 154 DSVKQSAALCLLRLYR---TSPDLVPMGDWTSRVVHLLNDQHLGVVTAATSLITTLAQKN 210
Query: 163 PQLRDYVINMGVVPPLLSFIKPDIPISFLRNVTWVIVNLCRN-KDPPPSMSTIIELLPAL 221
P+ + R VT +L P+ ++LL L
Sbjct: 211 PEEFKTSV-------------SLAVSRLSRIVTSASTDLQDYTYYFVPAPWLSVKLLRLL 257
Query: 222 NILIHHHDTSVSIYLWLSIIEKNPQISKILVSKMKILVDTVWALSY-----LTDGGNDQI 276
D +V L + + + SK + A+ + + ++
Sbjct: 258 QCYPPPEDPAVRGRLTECLETILNKAQEPPKSKKVQHSNAKNAVLFEAISLIIHHDSEPN 317
Query: 277 QMVIDSGVVPSLIPLLSHKEVKVQTASLRAVGNIVTGTDEQTQVILNCDALSHFPALLTH 336
+V L L H+E ++ +L ++ + + V + + + AL T
Sbjct: 318 LLVR---ACNQLGQFLQHRETNLRYLALESMCTLASSEFSHEAVKTHIETV--INALKTE 372
Query: 337 PKEKICKEAVWFLSNITAGNQAQVQAVIDAGLLPKIIANLQKVGRIVLRPNLQFEAAWAL 396
+ + AV L + + AQ ++ ++++ L+ +++ E +
Sbjct: 373 RDVSVRQRAVDLLYAMCDRSNAQQ-------IVAEMLSYLETA-----DYSIREEIVLKV 420
Query: 397 TNIASGTSAQTQEVVAAGAVPLFLRLLMSPHSNVCEQAVWALGNIIGDGPQLRDYVINMG 456
+A + V V L L+ V E+ + + I+ + ++ Y
Sbjct: 421 AILA-----EKYAVDYTWYVDTILNLIRIAGDYVSEEVWYRVIQIVINRDDVQGYAAKT- 474
Query: 457 VVPPLLSFIK-PDIPISFLRNVTWVI 481
+ ++ P + ++ +++
Sbjct: 475 ----VFEALQAPACHENLVKVGGYIL 496
Score = 59.4 bits (143), Expect = 1e-09
Identities = 58/434 (13%), Positives = 130/434 (29%), Gaps = 57/434 (13%)
Query: 116 IASGTSAQTQEVVAAGAVPLFLRLLMSPHSNVCEQAVWALGNIIGDGPQLRDYVINMGVV 175
+ + + L S + A+ + N+ +
Sbjct: 88 LFISVLVNSNSELIRLINNAIKNDLASRNPTFMGLALHCIANV-------GSREMAEAFA 140
Query: 176 PPLLSFIKPDIPISFLRN-VTWVIVNLCRNKDPPPSMSTIIELLPALNILIHHHDTSV-- 232
+ + + ++ ++ L R P + + + + L++ V
Sbjct: 141 GEIPKILVAGDTMDSVKQSAALCLLRLYRTS---PDLVPMGDWTSRVVHLLNDQHLGVVT 197
Query: 233 -SIYLWLSIIEKNPQISKILVSKMKILVDTVWALSYLTDGGNDQIQMVIDSGV-----VP 286
+ L ++ +KNP+ K VS V LS + + +Q V
Sbjct: 198 AATSLITTLAQKNPEEFKTSVSLA------VSRLSRIVTSASTDLQDYTYYFVPAPWLSV 251
Query: 287 SLIPLLSHKEVKVQTASLRAVGNIVTGTDEQTQVILNCDALSHFPALLTHPKEKICKEAV 346
L+ LL A + + + Q + H ++ K + EA+
Sbjct: 252 KLLRLLQCYPPPEDPAVRGRLTECLETILNKAQEPPKSKKVQH-----SNAKNAVLFEAI 306
Query: 347 WFLSNITAGNQAQVQAVIDAGLLPKIIANLQKVGRIVLRPNLQFEAAWALTNIASGTSAQ 406
+ + + V+A ++ LQ NL++ A ++ +AS S
Sbjct: 307 SLIIHHDSEPNLLVRAC------NQLGQFLQHR-----ETNLRYLALESMCTLAS--SEF 353
Query: 407 TQEVVAAGAVPLFLRLLMSPHSNVCEQAVWALGNIIGDGPQLRDYVINMGVVPPLLSFIK 466
+ E V + L +V ++AV L + R +V +LS+++
Sbjct: 354 SHEAVKTHIETVINALKTERDVSVRQRAVDLLYAMCD-----RSNA--QQIVAEMLSYLE 406
Query: 467 PDIPISFLRNVTWVIVNLCRNKDPPPSMSTIIELLPALNILIHHHDTSVS--IYLWLSII 524
S + + L + ++ + LN++ D Y + I+
Sbjct: 407 -TADYSIREEIVLKVAILAEKY--AVDYTWYVDTI--LNLIRIAGDYVSEEVWYRVIQIV 461
Query: 525 EKNPQISKILVSKM 538
+ +
Sbjct: 462 INRDDVQGYAAKTV 475
Score = 43.2 bits (101), Expect = 1e-04
Identities = 17/164 (10%), Positives = 57/164 (34%), Gaps = 20/164 (12%)
Query: 36 DDIEKMAQVNLDMLVVEAARKDNPELQLLAVQSARKLLSSDKNPPIEALIHSGILPVLVE 95
+ + + +++ ++ + + ++ AV + I+ ++
Sbjct: 352 EFSHEAVKTHIETVINALKTERDVSVRQRAVDLLYAMCDRS--------NAQQIVAEMLS 403
Query: 96 CLERSDRPNLQFEAAWALTNIASGTSAQTQEVVAAGAVPLFLRLLMSPHSNVCEQAVWAL 155
LE +D +++ E + +A + V V L L+ V E+ + +
Sbjct: 404 YLETAD-YSIREEIVLKVAILA-----EKYAVDYTWYVDTILNLIRIAGDYVSEEVWYRV 457
Query: 156 GNIIGDGPQLRDYVINMGVVPPLLSFIK-PDIPISFLRNVTWVI 198
I+ + ++ Y + ++ P + ++ +++
Sbjct: 458 IQIVINRDDVQGYAAKT-----VFEALQAPACHENLVKVGGYIL 496
>d1xqra1 a.118.1.21 (A:87-350) Hsp70-binding protein 1 (HspBP1)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 264
Score = 78.2 bits (191), Expect = 2e-16
Identities = 36/261 (13%), Positives = 84/261 (32%), Gaps = 28/261 (10%)
Query: 84 LIHSGILPVLVECLERSDRPNLQFEAAWALTNIASGTSAQTQEVVAAGAVPLFLRLLMSP 143
++ + P E + +D+ + A L ++ +G L R L +
Sbjct: 13 VLSQPMPPTAGEAEQAADQQERE-GALELLADLCENMDNAADFCQLSGMHLLVGRYLEAG 71
Query: 144 HSNVCEQAVWALGNIIGDGPQLRDYVINMGVVPPLLSFIKPDIPISFLRNVTWVIVNLCR 203
+ + +A +G + +++ V+ +G + LL + D + + I L R
Sbjct: 72 AAGLRWRAAQLIGTCSQNVAAIQEQVLGLGALRKLLRLLDRDACDTVRVKALFAISCLVR 131
Query: 204 NKDPPPSMSTIIELLPALNILIHHHDTSVSIYLWLSIIEKNPQISKILVSKMKILVDTVW 263
++ ++ L + K+ V + +
Sbjct: 132 EQEAGLLQFLRLDGFSVLMRAMQQQV-------------------------QKLKVKSAF 166
Query: 264 ALSYLTDGGNDQIQMVIDSGVVPSLIPLLSHKEVKVQTASLRAVGNIVTGTDEQTQVILN 323
L L G + + G+V L+ L+ + L A+ ++VT + +
Sbjct: 167 LLQNLLVGHPEHKGTLCSMGMVQQLVALVRTEHSPFHEHVLGALCSLVTDFPQGVRECRE 226
Query: 324 CDALSHFPALLTHPKEKICKE 344
+ LL H + + +
Sbjct: 227 PELG--LEELLRHRCQLLQQH 245
Score = 58.1 bits (139), Expect = 8e-10
Identities = 24/215 (11%), Positives = 67/215 (31%), Gaps = 8/215 (3%)
Query: 391 EAAWALTNIASGTSAQTQEVVAAGAVPLFLRLLMSPHSNVCEQAVWALGNIIGDGPQLRD 450
A L ++ +G L R L + + + +A +G + +++
Sbjct: 36 GALELLADLCENMDNAADFCQLSGMHLLVGRYLEAGAAGLRWRAAQLIGTCSQNVAAIQE 95
Query: 451 YVINMGVVPPLLSFIKPDIPISFLRNVTWVIVNLCRNKDPPPSMSTIIELLPALNILIHH 510
V+ +G + LL + D + + I L R ++ ++ L +
Sbjct: 96 QVLGLGALRKLLRLLDRDACDTVRVKALFAISCLVREQEAGLLQFLRLDGFSVLMRAMQQ 155
Query: 511 HDTSVSIY---LWLSIIEKNPQISKILVSKMKVCSRYLYYLSHNSGPMSCQKKQHSIYMC 567
+ + L +++ +P+ K + M + + + + +
Sbjct: 156 QVQKLKVKSAFLLQNLLVGHPEH-KGTLCSMGMVQQLVALVRTEH--SPFHEHVLGALCS 212
Query: 568 VSPGTDEQTQVILNCDALSHFPALLTHPKEKICKE 602
+ + + + LL H + + +
Sbjct: 213 LVTDFPQGVRECREPELG--LEELLRHRCQLLQQH 245
>d2vglb_ a.118.1.10 (B:) Adaptin beta subunit N-terminal fragment
{Human (Homo sapiens) [TaxId: 9606]}
Length = 579
Score = 66.3 bits (161), Expect = 8e-12
Identities = 85/494 (17%), Positives = 157/494 (31%), Gaps = 76/494 (15%)
Query: 56 KDNPELQLLAVQSARKLLSSDKNPPIEAL--------IHSGILPVLVECLERSDRPNLQF 107
K P++ ++AV S K D NP I AL I L E L + + +
Sbjct: 75 KSQPDMAIMAVNSFVKDCE-DPNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPY 133
Query: 108 EAAWALTNIASGTSAQTQEVVAAGAVPLFLRLLMSPHSNVCEQAVWALGNIIGDGPQLRD 167
A +A Q V G + L+ + V AV AL I P
Sbjct: 134 VRKTAAVCVAKLHDINAQMVEDQGFLDSLRDLIADSNPMVVANAVAALSEISESHPNSNL 193
Query: 168 YVINMGVVPPLLSFIKPDIPISFLRNVTWVIVNLCRNKDPPPSMSTIIELLPALNILIHH 227
+N + LL+ + + + C + P + + + H
Sbjct: 194 LDLNPQNINKLLTALNECTEWG------QIFILDCLSNYNPKDDREAQSICERVTPRLSH 247
Query: 228 HDTSVSIYLWLSIIEKNPQISKILVSKMKILVDTVWALSYLTDGGNDQIQMVIDSGVVPS 287
+++V + V + L +D M++ P
Sbjct: 248 ANSAVVLSA----------------------VKVLMKFLELLPKDSDYYNMLLKKLAPPL 285
Query: 288 LIPLLSHKEVKVQTASLRAVGNIVTGTDEQTQVILNCDALSHFPALLTHPKEKICKEAVW 347
+ L E +VQ +LR + IV E + + + + + E +
Sbjct: 286 V--TLLSGEPEVQYVALRNINLIVQKRPEILKQEIKVFFV------KYNDPIYVKLEKLD 337
Query: 348 FLSNITAGNQAQVQAVIDAGLLPKIIANLQKVGRIVLRPNLQFEAAWALTNIASGTSAQT 407
+ + +QA + V L ++ +V +R ++ A G A
Sbjct: 338 IMIRLA--SQANIAQV-----LAELKEYATEVDVDFVRKAVR----------AIGRCAIK 380
Query: 408 QEVVAAGAVPLFLRLLMSPHSNVCEQAVWALGNIIGDGPQLRDYVINMGVVPPLLSFIKP 467
E A V L L+ + + V ++A+ + +I P + +I L +
Sbjct: 381 VEQSAERCVSTLLDLIQTKVNYVVQEAIVVIRDIFRKYPNKYESII-----ATLCENLDS 435
Query: 468 DIPISFLRNVTWVIVNLCRNKDPPPSMSTIIELLPALNILIHHHDTSVSIYLWLSIIE-- 525
+ W++ D ELL + H T V + L +I++
Sbjct: 436 LDEPDARAAMIWIVGEYAERIDNAD------ELLESFLEGFHDESTQVQLTLLTAIVKLF 489
Query: 526 -KNPQISKILVSKM 538
K P ++ LV ++
Sbjct: 490 LKKPSETQELVQQV 503
>d1qbkb_ a.118.1.1 (B:) Karyopherin beta2 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 888
Score = 50.1 bits (118), Expect = 1e-06
Identities = 44/388 (11%), Positives = 109/388 (28%), Gaps = 61/388 (15%)
Query: 93 LVECLERSDRPNLQFEAAWALTNIASGTSAQTQEVVAAGAVPLFLRLLMSPHSNVCEQAV 152
+ + ++ W L+ A +Q + + L+ ++ + V E A
Sbjct: 440 HLIQCLSDKKALVRSITCWTLSRYAHWVVSQPPDTYLKPLMTELLKRILDSNKRVQEAAC 499
Query: 153 WALGNIIGDGPQLRDYVINMGVVPPLLSFIKPDIPISFLRNVTWVIVNLCRNKDPPPSMS 212
A + + + + + +F K + + I L + +
Sbjct: 500 SAFATLEEEACTELVPYLAYILDTLVFAFSKYQHKNLLI--LYDAIGTLADSVGHHLNKP 557
Query: 213 TIIELLPALNILIHHHDTSVSIYLWLSIIEKNPQISKILVSKMKILVDTVWALSYLTDGG 272
I++L ++ + ++E ++ L S + V
Sbjct: 558 EYIQML-MPPLIQKWNMLKDEDKDLFPLLECLSSVATALQSGFLPYCEPV-----YQRCV 611
Query: 273 NDQIQMVIDSGVVPSLIPLLSHKEVKVQTASLRAVGNIVTGTDEQTQVILNCDALSH-FP 331
N + + + + + + +L + + G + ++ +
Sbjct: 612 NLVQKTLAQAMLNNAQPDQYEAPDKDFMIVALDLLSGLAEGLGGNIEQLVARSNILTLMY 671
Query: 332 ALLTHPKEKICKEAVWFLSNITAGNQAQVQAVIDAGLLPKIIANLQKVGRIVLRPNLQFE 391
+ ++ + + L ++T V+ I
Sbjct: 672 QCMQDKMPEVRQSSFALLGDLTKACFQHVKPCIAD------------------------- 706
Query: 392 AAWALTNIASGTSAQTQEVVAAGAVPLFLRLLMSPHSNVCEQAVWALGNII-GDGPQLRD 450
+P+ L +VC A WA+G I G +++
Sbjct: 707 -----------------------FMPILGTNLNPEFISVCNNATWAIGEISIQMGIEMQP 743
Query: 451 YVINMGVVPPLLSFIK-PDIPISFLRNV 477
Y+ V+ L+ I P+ P + L N
Sbjct: 744 YIPM--VLHQLVEIINRPNTPKTLLENT 769
Score = 42.4 bits (98), Expect = 2e-04
Identities = 31/169 (18%), Positives = 67/169 (39%), Gaps = 6/169 (3%)
Query: 28 PLADSTDEDDIEKMAQVNLDMLVVEAARKDNPELQLLAVQSARKLLSSDKNPPIEALIHS 87
P+ + +AQ L+ + + + ++A+ L + + S
Sbjct: 605 PVYQRCVNLVQKTLAQAMLNNAQPDQYEAPDKDFMIVALDLLSGLAEGLGGNIEQLVARS 664
Query: 88 GILPVLVECLERSDRPNLQFEAAWALTNIASGTSAQTQEVVAAGAVPLFLRLLMSPHSNV 147
IL ++ +C++ P ++ + L ++ + +A +P+ L +V
Sbjct: 665 NILTLMYQCMQDKM-PEVRQSSFALLGDLTKACFQHVKPCIAD-FMPILGTNLNPEFISV 722
Query: 148 CEQAVWALGNII-GDGPQLRDYVINMGVVPPLLSFIK-PDIPISFLRNV 194
C A WA+G I G +++ Y+ V+ L+ I P+ P + L N
Sbjct: 723 CNNATWAIGEISIQMGIEMQPYIPM--VLHQLVEIINRPNTPKTLLENT 769
>d1ibrb_ a.118.1.1 (B:) Importin beta {Human (Homo sapiens) [TaxId:
9606]}
Length = 458
Score = 48.3 bits (113), Expect = 3e-06
Identities = 24/96 (25%), Positives = 38/96 (39%), Gaps = 4/96 (4%)
Query: 85 IHSGILPVLVECLERSDRPNLQFEAAWALTNIASGTSAQTQEVVAAGAVPLFLRLLMSPH 144
I +LP + E ++ D + A A I G + + A+P + L+ P
Sbjct: 362 IVPHVLPFIKEHIKNPD-WRYRDAAVMAFGCILEGPEPSQLKPLVIQAMPTLIELMKDPS 420
Query: 145 SNVCEQAVWALGNIIGDGPQLRDYVINMGVVPPLLS 180
V + A W +G I P+ IN + PLL
Sbjct: 421 VVVRDTAAWTVGRICELLPEA---AINDVYLAPLLQ 453
Score = 47.5 bits (111), Expect = 5e-06
Identities = 44/297 (14%), Positives = 101/297 (34%), Gaps = 18/297 (6%)
Query: 89 ILPVLVECLERSDR-PNLQFEAAWALTNIAS-GTSAQTQEVVAAGAVPLFLRLLMSPHSN 146
IL +++ + + + N++ A AL N + +E + + P +
Sbjct: 172 ILTAIIQGMRKEEPSNNVKLAATNALLNSLEFTKANFDKESERHFIMQVVCEATQCPDTR 231
Query: 147 VCEQAVWALGNIIGDGPQLRDYVINMGVVPPLLSFIKPDIPISFLRNV-TWVIVNLCRNK 205
V A+ L I+ Q + + + + +K DI L+ + W V
Sbjct: 232 VRVAALQNLVKIMSLYYQYMETYMGPALFAITIEAMKSDIDEVALQGIEFWSNVCDEEMD 291
Query: 206 DPPPSMSTIIELLPALNILIHHHDTSVSIYLWLSIIEKNPQISKILVSKMKILVDTVWAL 265
+ + P + + ++ P +++ L + + D W
Sbjct: 292 LAIEASEAAEQGRPPEHTSKFYAKGALQ--------YLVPILTQTLTKQDENDDDDDWNP 343
Query: 266 SYLTDGGNDQIQMVIDSGVVPSLIP----LLSHKEVKVQTASLRAVGNIVTGTDEQTQVI 321
+ + +VP ++P + + + + + A++ A G I+ G +
Sbjct: 344 CKAAGVCLMLLATCCEDDIVPHVLPFIKEHIKNPDWRYRDAAVMAFGCILEGPEPSQLKP 403
Query: 322 LNCDALSHFPALLTHPKEKICKEAVWFLSNITAGNQAQVQAVIDAGLLPKIIANLQK 378
L A+ L+ P + A W + I + +A I+ L ++ L +
Sbjct: 404 LVIQAMPTLIELMKDPSVVVRDTAAWTVGRIC---ELLPEAAINDVYLAPLLQCLIE 457
Score = 44.8 bits (104), Expect = 3e-05
Identities = 19/72 (26%), Positives = 28/72 (38%), Gaps = 3/72 (4%)
Query: 392 AAWALTNIASGTSAQTQEVVAAGAVPLFLRLLMSPHSNVCEQAVWALGNIIGDGPQLRDY 451
A A I G + + A+P + L+ P V + A W +G I P+
Sbjct: 385 AVMAFGCILEGPEPSQLKPLVIQAMPTLIELMKDPSVVVRDTAAWTVGRICELLPEA--- 441
Query: 452 VINMGVVPPLLS 463
IN + PLL
Sbjct: 442 AINDVYLAPLLQ 453
>d1u6gc_ a.118.1.2 (C:) Cullin-associated NEDD8-dissociated protein
1 (Tip120) {Human (Homo sapiens) [TaxId: 9606]}
Length = 1207
Score = 47.8 bits (112), Expect = 6e-06
Identities = 83/633 (13%), Positives = 182/633 (28%), Gaps = 72/633 (11%)
Query: 32 STDEDDIEKMAQVNLDMLVVEAARKDNPELQLLAVQSARKLLSSDKNPPIEALIHS---- 87
D+D K+ + ++++ N E+Q LAV+ L+S K +E ++ +
Sbjct: 37 KLDDDSERKVVK-----MILKLLEDKNGEVQNLAVKCLGPLVSKVKEYQVETIVDTLCTN 91
Query: 88 --------------------------------------GILPVLVECLERSDRPNLQFEA 109
I L + + + ++Q EA
Sbjct: 92 MLSDKEQLRDISSIGLKTVIGELPPASSGSALAANVCKKITGRLTSAIAKQEDVSVQLEA 151
Query: 110 AWALTNIASGTSAQTQEVVAAGAVPLFLRLLMSPHSNVCEQAVWALGNIIGDGPQLRDYV 169
+ ++ S + + L L SP V ++ + ALG+++ +
Sbjct: 152 LDIMADMLSRQGGLLVNFHPS-ILTCLLPQLTSPRLAVRKRTIIALGHLVMSCGN----I 206
Query: 170 INMGVVPPLLSFIKPDIPISFLRNVTWVIVNLCRN--KDPPPSMSTIIELLPALNILIHH 227
+ + ++ LLS + + +S R I + R + II L+ +
Sbjct: 207 VFVDLIEHLLSELSKNDSMSTTRTYIQCIAAISRQAGHRIGEYLEKIIPLVVKFCNVDDD 266
Query: 228 HDTSVSIYLWLSIIEK-----NPQISKILVSKMKILVDTVWALSYLTDGGNDQIQMVIDS 282
I + S + + P +S I+ +K L D + +
Sbjct: 267 ELREYCIQAFESFVRRCPKEVYPHVSTIINICLKYLTYDPNYNYDDEDEDENAMDADGGD 326
Query: 283 GVVPSLIPLLS---HKEVKVQTASLRAVGNIVTGTDEQTQVILNCDALSHFPALLTHPKE 339
S KV+ A+ + + +V+ E + +E
Sbjct: 327 DDDQGSDDEYSDDDDMSWKVRRAAAKCLDAVVSTRHEMLPEFYK-TVSPALISRFKEREE 385
Query: 340 KICKEAVWFLSNITAGNQAQVQAVIDAGLLPKIIANLQKVGRIVLRPNLQFEAAWALTNI 399
+ + ++ + + D + + L + V PN+ +A
Sbjct: 386 NVKADVFHAYLSLLKQTRPVQSWLCDPDAMEQGETPLTMLQSQV--PNI-VKALHKQMKE 442
Query: 400 ASGTSAQTQEVVAAGAVPLFLRLLMSPHSNVCEQAVWALGNIIGDGPQLRDYVINMGVVP 459
S + Q + V + L + +++L + D + + V+
Sbjct: 443 KSVKTRQCCFNMLTELVNVLPGALTQHIPVLVPGIIFSLNDKSSSSNLKIDALSCLYVIL 502
Query: 460 PLLSFIKPDIPISFLRNVTWVIVNLCRNKDPPPSMSTIIELLPALNILIHHHDTSVSIYL 519
S + L V K ++ +L+ + L + Y+
Sbjct: 503 CNHSPQVFHPHVQALVPPVVACVGDPFYKITSEALLVTQQLVKVIRPLDQPSSFDATPYI 562
Query: 520 W------LSIIEKNPQISKILVSKMKVCSRYLYYLSHNSGPMSCQKKQHSIYMCVSPGTD 573
+ ++ ++ + + + L N G Q + + T
Sbjct: 563 KDLFTCTIKRLKAADIDQEVKERAISCMGQIICNLGDNLGSDLPNTLQIFLERLKNEITR 622
Query: 574 EQTQVILNCDALSHFPALLTHPKEKICKEAVWF 606
T L A S L + F
Sbjct: 623 LTTVKALTLIAGSPLKIDLRPVLGEGVPILASF 655
Score = 41.7 bits (96), Expect = 4e-04
Identities = 55/409 (13%), Positives = 126/409 (30%), Gaps = 38/409 (9%)
Query: 94 VECLERSDRPNLQFEAAWALTNIASGTSAQTQEVVAAGAVPLFLRLLMSPHSNVCEQAVW 153
+ R ++ L+ AL + S + + L+ +V + A+
Sbjct: 652 LASFLRKNQRALKLGTLSALDILIKNYSDSLTAAMIDAVLDELPPLISESDMHVSQMAIS 711
Query: 154 ALGNIIGDGPQLRDYVINMGVVPPLLSFIKPDI-----PISFLRNVTWVIVNLCRNKDPP 208
L + P + ++ L+ ++ + + L ++V N
Sbjct: 712 FLTTLAKVYPSSLSKISGS-ILNELIGLVRSPLLQGGALSAMLDFFQALVVTGTNNLGYM 770
Query: 209 PSMSTIIELLPALNILIHHHDTSVSIYLWLSII------EKNPQISKILVSKMKILVDTV 262
+ + + + + + H + SI ++ + E + + +
Sbjct: 771 DLLRMLTGPVYSQSTALTHKQSYYSIAKCVAALTRACPKEGPAVVGQFIQDVKNSRSTDS 830
Query: 263 WALSYLTDGGN--DQIQMVIDSGVVPSLIPLLSHKEVKVQTASLRAVGNIVTG------- 313
L L G I + + ++ S +V++A+ A+G+I G
Sbjct: 831 IRLLALLSLGEVGHHIDLSGQLELKSVILEAFSSPSEEVKSAASYALGSISVGNLPEYLP 890
Query: 314 ------TDEQTQVILNCDALSHFPALLTHPKEKICKEAVW-FLSNITAGNQAQVQAVIDA 366
T + + L +L + + K E +W L + + V+
Sbjct: 891 FVLQEITSQPKRQYLLLHSLKEIISSASVVGLKPYVENIWALLLKHCECAEEGTRNVVAE 950
Query: 367 GLLPKIIANLQKVGRIVLR------PNLQFEAAWALTNIASGTSAQTQEVVAAGAVPLFL 420
L + + + + + + A+ S ++ + FL
Sbjct: 951 CLGKLTLIDPETLLPRLKGYLISGSSYARSSVVTAVKFTISDHPQPIDPLLK-NCIGDFL 1009
Query: 421 RLLMSPHSNVCEQAVWALGNIIGDGPQL-RDYVINMGVVPPLLSFIKPD 468
+ L P NV A+ + + P L RD + V+P L + K
Sbjct: 1010 KTLEDPDLNVRRVALVTFNSAAHNKPSLIRDLLDT--VLPHLYNETKVR 1056
Score = 39.0 bits (89), Expect = 0.003
Identities = 28/176 (15%), Positives = 54/176 (30%), Gaps = 15/176 (8%)
Query: 11 ELRKNKREETLQKRRNVPLADSTDEDDIEKMAQVNLDMLVVEAARKDNPELQLLAVQSAR 70
E+ + + L + S ++ + +L+ + + + +
Sbjct: 895 EITSQPKRQYLLLHSLKEIISSASVVGLKPYVENIWALLL-KHCECAEEGTRNVVAECLG 953
Query: 71 KLLSSDKNPPIEALIHSGILPVLVECLERSDRPNLQFEAAWALTNIASGTSAQTQEVVAA 130
KL D +LP L L + A+ S ++
Sbjct: 954 KLTLID---------PETLLPRLKGYLISGS-SYARSSVVTAVKFTISDHPQPIDPLLK- 1002
Query: 131 GAVPLFLRLLMSPHSNVCEQAVWALGNIIGDGPQL-RDYVINMGVVPPLLSFIKPD 185
+ FL+ L P NV A+ + + P L RD + V+P L + K
Sbjct: 1003 NCIGDFLKTLEDPDLNVRRVALVTFNSAAHNKPSLIRDLLDT--VLPHLYNETKVR 1056
Score = 32.8 bits (73), Expect = 0.20
Identities = 46/338 (13%), Positives = 108/338 (31%), Gaps = 21/338 (6%)
Query: 165 LRDYVINMGVVPPLLSFIKPDIPISFLRNVTWVIVNLCRNKDPPPSMSTIIELLPALNIL 224
L++ + + V L + I + + L + + L AL+IL
Sbjct: 616 LKNEITRLTTVKALTLIAGSPLKIDLRPVLGEGVPILASFLRKNQ-RALKLGTLSALDIL 674
Query: 225 IHHHDTSVSIYLWLSIIEKNPQISKILVSKMKILVDTVWALSYLTDGGNDQIQMVIDSGV 284
I ++ S++ + +++++ P + S M + + L+ L + + S +
Sbjct: 675 IKNYSDSLTAAMIDAVLDELPPLISE--SDMHVSQMAISFLTTLAKVYPSSLSKISGSIL 732
Query: 285 VPSLIPLLSHKEVKVQTASLRAVGNIVTGTDEQTQVILNCDALSHFPALLTHPKEKICKE 344
+ + S +++ + T ++ + P + + K+
Sbjct: 733 NELIGLVRSPLLQGGALSAMLDFFQALVVTGTNNLGYMDLLRMLTGP-VYSQSTALTHKQ 791
Query: 345 AVWFLSNITAGNQAQVQAVIDAGLLPKIIANLQKVGRIVLRPNLQFEAAWALTNIASGTS 404
+ + ++ A + + +Q V +++ A +L +
Sbjct: 792 SYYSIAKCVA----ALTRACPKEGPAVVGQFIQDVKNSRSTDSIRLLALLSLGEVGHHID 847
Query: 405 AQTQEVVAAGAVPLFLRLLMSPHSNVCEQAVWALGNIIGDGPQLRDYVINMGVVPPLLSF 464
Q + + L SP V A +ALG+I +P +L
Sbjct: 848 LSGQLEL----KSVILEAFSSPSEEVKSAASYALGSISVGNLPE--------YLPFVLQE 895
Query: 465 IKPDIPISF-LRNVTWVIVNLCRNKDPPPSMSTIIELL 501
I + L + I++ P + I LL
Sbjct: 896 ITSQPKRQYLLLHSLKEIISSASVVGLKPYVENIWALL 933
>d1qgra_ a.118.1.1 (A:) Importin beta {Human (Homo sapiens) [TaxId:
9606]}
Length = 876
Score = 38.2 bits (87), Expect = 0.005
Identities = 49/385 (12%), Positives = 115/385 (29%), Gaps = 21/385 (5%)
Query: 93 LVECLERSDRPNLQFEAAWALTNIASGTSAQTQEVVAAGAVPLFLRLLMSPHSNVCEQAV 152
++ ++ + A A I G + + A+P + L+ P V + A
Sbjct: 370 FIKEHIKNPDWRYRDAAVMAFGCILEGPEPSQLKPLVIQAMPTLIELMKDPSVVVRDTAA 429
Query: 153 WALGNIIGD-GPQLRDYVINMGVVPPLLSFIKPDIPISFLRNVTWVIVNLCRNKDPPPSM 211
W +G I + V ++ L+ + + ++ NV W +L +
Sbjct: 430 WTVGRICELLPEAAINDVYLAPLLQCLIEGLSAEPRVA--SNVCWAFSSLAEAAYEAADV 487
Query: 212 STIIELLPALNILIHHHDTSVSIYLWLSIIEKNPQISKILVSKMKILVDTVWALSYLTDG 271
+ PA L + V L + + + S + L++ V +
Sbjct: 488 ADDQ-EEPATYCLSSSFELIVQKLLET-TDRPDGHQNNLRSSAYESLMEIVKNSAKDCYP 545
Query: 272 GNDQIQMVIDSGVVPSLI-------PLLSHKEVKVQTASLRAVGNIVTGTDEQTQVILNC 324
+ +VI + L + +Q+ + N++ Q + ++
Sbjct: 546 AVQKTTLVIMERLQQVLQMESHIQSTSDRIQFNDLQSLLCATLQNVLRKVQHQDALQISD 605
Query: 325 DALSHFPALLTHPKEKICKEAVWFLSNITAGNQAQVQAVIDAGLLPKIIANLQKVGRIVL 384
++ + V + + +V + L +
Sbjct: 606 VVMASLLRMFQSTAGSG---GVQEDALMAVSTLVEVLGGEFLKYMEAFKPFLGIGLKNYA 662
Query: 385 RPNLQFEAAWALTNIASGTSAQTQEVVAAGAVPLFLRLLMSP--HSNVCEQAVWALGNII 442
+ A + ++ + + L L L + H +V Q + G+I
Sbjct: 663 EYQVCLAAVGLVGDLCRALQSNIIPFCDE-VMQLLLENLGNENVHRSVKPQILSVFGDIA 721
Query: 443 -GDGPQLRDYVINMGVVPPLLSFIK 466
G + + Y+ V+ L +
Sbjct: 722 LAIGGEFKKYLEV--VLNTLQQASQ 744
Score = 36.3 bits (82), Expect = 0.017
Identities = 48/499 (9%), Positives = 129/499 (25%), Gaps = 22/499 (4%)
Query: 89 ILPVLVECLERSD-RPNLQFEAAWALTNIASGTSAQTQEVVAAGAVPLFLRLLMSPHSNV 147
++P LV + + +++ A+ I + + + + ++ + +
Sbjct: 129 LIPQLVANVTNPNSTEHMKESTLEAIGYICQDIDPEQLQDKSNEILTAIIQGMRKEEPSN 188
Query: 148 CEQ--AVWALGNIIGDGPQLRDYVINMGVVPPLLSFIKPDIPISFLRNVTWVIVNLCRNK 205
+ A AL N + D + ++ +V +
Sbjct: 189 NVKLAATNALLNSLEFTKANFDKESERHFIMQVVCEATQCPDTRVRVAALQNLVKIMSLY 248
Query: 206 DPPPSMSTIIELLPALNILIHHHDTSVSIYLWLSIIEKNPQISKILVSKMKILVDTVWAL 265
L + V++ + + + +
Sbjct: 249 YQYMETYMGPALFAITIEAMKSDIDEVALQGIEFWSNVCDEEMDLAIEASEAAEQGR--- 305
Query: 266 SYLTDGGNDQIQMVIDSGVVPSLIPLLSHKEVKVQTASLRAVGNIVTGTDEQTQVILNCD 325
+ G + L+P+L+ K N ++ C
Sbjct: 306 ------PPEHTSKFYAKGALQYLVPILTQTLTKQDENDDDDDWNPCKAAGVCLMLLATCC 359
Query: 326 ALSHFPALLTHPKEKICKEAVWFLSNITAGNQAQVQAVIDAGLLPKIIANLQKVGRIVLR 385
P +L KE I + ++ + L P +I + + ++
Sbjct: 360 EDDIVPHVLPFIKEHIKNPDWRYRDAAVMAFGCILEGPEPSQLKPLVIQAMPTLIELMKD 419
Query: 386 PNLQFEAA--WALTNIASGTSAQTQEVVAAGAVPLFLRLLMSPHSNVCEQAVWALGNIIG 443
P++ W + I V + L +S V WA ++
Sbjct: 420 PSVVVRDTAAWTVGRICELLPEAAINDVYLAPLLQCLIEGLSAEPRVASNVCWAFSSLA- 478
Query: 444 DGPQLRDYVINMGVVPPLLSFIKPDIPISFLRNVTWVIVNLCRNKDPPPSMSTIIELLPA 503
V + SF V ++ R ++ +
Sbjct: 479 -----EAAYEAADVADDQEEPATYCLSSSFELIVQKLLETTDRPDGHQNNL--RSSAYES 531
Query: 504 LNILIHHHDTSVSIYLWLSIIEKNPQISKILVSKMKVCSRYLYYLSHNSGPMSCQKKQHS 563
L ++ + + + + ++ ++L + + S ++ + C Q+
Sbjct: 532 LMEIVKNSAKDCYPAVQKTTLVIMERLQQVLQMESHIQSTSDRIQFNDLQSLLCATLQNV 591
Query: 564 IYMCVSPGTDEQTQVILNC 582
+ + + V++
Sbjct: 592 LRKVQHQDALQISDVVMAS 610
Score = 30.5 bits (67), Expect = 1.1
Identities = 16/98 (16%), Positives = 32/98 (32%), Gaps = 6/98 (6%)
Query: 89 ILPVLVECLERSDRPNLQFEAAWALTNIASGTSAQTQEVVAAGAVPLFLRLLMSP--HSN 146
P L L+ + A + ++ + + L L L + H +
Sbjct: 650 FKPFLGIGLKNYAEYQVCLAAVGLVGDLCRALQSNIIPFCDE-VMQLLLENLGNENVHRS 708
Query: 147 VCEQAVWALGNII-GDGPQLRDYVINMGVVPPLLSFIK 183
V Q + G+I G + + Y+ V+ L +
Sbjct: 709 VKPQILSVFGDIALAIGGEFKKYLEV--VLNTLQQASQ 744
>d1b3ua_ a.118.1.2 (A:) Constant regulatory domain of protein
phosphatase 2a, pr65alpha {Human (Homo sapiens) [TaxId:
9606]}
Length = 588
Score = 37.8 bits (86), Expect = 0.006
Identities = 56/446 (12%), Positives = 125/446 (28%), Gaps = 38/446 (8%)
Query: 36 DDIEKMAQVNLDMLVVEAARKDNPELQLLAVQSARKLLSSDKNPPI------------EA 83
++ + L + + ++ Q R L S D P + +
Sbjct: 136 GGDWFTSRTSACGLFSVCYPRVSSAVKAELRQYFRNLCS-DDTPMVRRAAASKLGEFAKV 194
Query: 84 LIHSGILPVLVECLERSDRPNLQFEAAWALTNIASGTSAQTQEVVAAGAVPLFLRLLMSP 143
L + ++ A+ + QE + A +P +
Sbjct: 195 LELDNVKSEIIPMFSNLASDEQDSVRLLAVEACVNIAQLLPQEDLEALVMPTLRQAAEDK 254
Query: 144 HSNVCEQAVWALGNIIGDGPQLRDYVINMGVVPPLLSFIKPDIPISFLRNVTWVIVNLCR 203
V + + L+ + ++ + V NL
Sbjct: 255 SWRVRYMVADKFTELQKAVGPEITKTDLVPAFQNLMKDCEAEVRAAASHKVKEFCENLSA 314
Query: 204 NKDPPPSMSTIIELLPAL--------NILIHHHDTSVSIYLWLSIIEKNPQISKILVSKM 255
+ MS I+ + L + +S L ++ + K
Sbjct: 315 DCRENVIMSQILPCIKELVSDANQHVKSALASVIMGLSPILGKDNTIEHLLPLFLAQLKD 374
Query: 256 KILVDTVWALSYLTDGGNDQIQMVIDSGVVPSLIPLLSHKEVKVQTASLRAVGNIVTGTD 315
+ + +S L + ++P+++ L + +V+ A + + +
Sbjct: 375 ECPEVRLNIISNLDCVNEVIGIRQLSQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLG 434
Query: 316 EQTQVILNCDALSHFPALLTHPKEKICKEAVWFLSNITAGNQAQVQAVIDAGLLPKIIAN 375
+ + S A L I + A L + + A ++PK++A
Sbjct: 435 VE---FFDEKLNSLCMAWLVDHVYAIREAATSNLKKLVEKFGKEW---AHATIIPKVLAM 488
Query: 376 LQKVGRIVLRPNLQFEAAWALTNIASGTSAQTQEVVAAGAVPLFLRLLMSPHSNVCEQAV 435
+ + + ++ Q++ +P LR+ P +NV
Sbjct: 489 SGDP-----NYLHRMTTLFCINVLSEVCG---QDITTKHMLPTVLRMAGDPVANVRFNVA 540
Query: 436 WALGNIIGDGPQLRDYVINMGVVPPL 461
+L I GP L + + V P L
Sbjct: 541 KSLQKI---GPILDNSTLQSEVKPIL 563
Score = 34.4 bits (77), Expect = 0.063
Identities = 16/110 (14%), Positives = 35/110 (31%), Gaps = 8/110 (7%)
Query: 49 LVVEAARKDNPELQLLAVQSARKLLSSDKNPPIEALIHSGILPVLVECLERSDRPNLQFE 108
V+ + N ++ + L + + +LP ++ N++F
Sbjct: 484 KVLAMSGDPNYLHRMTTLFCINVLSEVCG----QDITTKHMLPTVLRMAGDPV-ANVRFN 538
Query: 109 AAWALTNIASGTSAQTQEVVAAGAVPLFLRLLMSPHSNVCEQAVWALGNI 158
A +L I + + P+ +L +V A AL +
Sbjct: 539 VAKSLQKIGPILD---NSTLQSEVKPILEKLTQDQDVDVKYFAQEALTVL 585
Score = 31.7 bits (70), Expect = 0.42
Identities = 42/332 (12%), Positives = 93/332 (28%), Gaps = 28/332 (8%)
Query: 121 SAQTQEVVAAGAVPLFLRLLMSPHSNVCEQAVWALGNIIGDGPQLRDYVINMGVVPPLLS 180
A E+ VP F L+ + V A + + + M + P +
Sbjct: 271 KAVGPEITKTDLVPAFQNLMKDCEAEVRAAASHKVKEFCENLSADCRENVIMSQILPCIK 330
Query: 181 FIKPDIPISFLRNVTWVIVNLCRNKDPPPSMSTIIELLPALNILIHHHDTSVSIYLWLSI 240
+ D + VI+ L ++ ++ L A I +
Sbjct: 331 ELVSDANQHVKSALASVIMGLSPILGKDNTIEHLLPLFLAQLKDECPEVRLNIISNLDCV 390
Query: 241 IEKNPQISKILVSK---MKILVDTVWALSYLTDGGNDQIQMVIDSG-----VVPSLIPLL 292
E +++ D W + + + + + L
Sbjct: 391 NEVIGIRQLSQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWL 450
Query: 293 SHKEVKVQTASLRAVGNIVT--GTDEQTQVILNCDALSHFPALLTHPKEKICKEAVWFLS 350
++ A+ + +V G + I+ A+ P ++ ++
Sbjct: 451 VDHVYAIREAATSNLKKLVEKFGKEWAHATIIP-----KVLAMSGDPNYLHRMTTLFCIN 505
Query: 351 NITAGNQAQVQAVIDAGLLPKIIANLQ-KVGRIVLRPNLQFEAAWALTNIASGTSAQTQE 409
++ Q + +LP ++ V N++F A +L I
Sbjct: 506 VLSEVCG---QDITTKHMLPTVLRMAGDPV------ANVRFNVAKSLQKIGPILD---NS 553
Query: 410 VVAAGAVPLFLRLLMSPHSNVCEQAVWALGNI 441
+ + P+ +L +V A AL +
Sbjct: 554 TLQSEVKPILEKLTQDQDVDVKYFAQEALTVL 585
>d1oyza_ a.118.1.16 (A:) Hypothetical protein YibA {Escherichia coli
[TaxId: 562]}
Length = 276
Score = 36.8 bits (83), Expect = 0.008
Identities = 20/244 (8%), Positives = 53/244 (21%), Gaps = 25/244 (10%)
Query: 386 PNLQFEAAWALTNIASGTSAQTQEVVAAGAVPLFLRLLMSPHSNVCEQAVWALGNIIGDG 445
+ +A L AV L + + + + LG I
Sbjct: 33 SLKRISSARVLQLRGG-----------QDAVRLAIEFCSDKNYIRRDIGAFILGQIKICK 81
Query: 446 PQLRDYVINMGVVPPLLSFIKPDIPISFLRNVTWVIVNLCRNKDPPPSMSTIIELLPALN 505
+ L + D C+ +P S + +
Sbjct: 82 KCEDNV------FNILNNMALNDKSACVRATAIESTAQRCKK-NPIYSPKIVEQSQITAF 134
Query: 506 ILIHHHDTSV----SIYLWLSIIEKNPQISKILVSKMKVCSRYLYYLSHNSGPMSCQKKQ 561
+ + S+ + I + K ++ + + ++
Sbjct: 135 DKSTNVRRATAFAISVINDKATIPLLINLLKDPNGDVRNWAAFAININKYDNSDIRDCFV 194
Query: 562 HSIYMCVSPGTDEQTQVILNCDALSHFPALLTHPK-EKICKEAVWFLSNITAGNQAQVQA 620
+ E + L K + + + + G++ +
Sbjct: 195 EMLQDKNEEVRIEAIIGLSYRKDKRVLSVLCDELKKNTVYDDIIEAAGEL--GDKTLLPV 252
Query: 621 VIDA 624
+
Sbjct: 253 LDTM 256
Score = 34.8 bits (78), Expect = 0.036
Identities = 24/235 (10%), Positives = 47/235 (20%), Gaps = 31/235 (13%)
Query: 93 LVECLERSDRPNLQFEAAWALTNIASGTSAQTQEVVAAGAVPLFLRLLMSPHSNVCEQAV 152
L L+ + +A L AV L + + +
Sbjct: 24 LFRLLD-DHNSLKRISSARVLQLRGG-----------QDAVRLAIEFCSDKNYIRRDIGA 71
Query: 153 WALGNIIGDGPQLRDYV-------------INMGVVPPLLSFIKPDIPISFLRNVTWVIV 199
+ LG I + + PI + V +
Sbjct: 72 FILGQIKICKKCEDNVFNILNNMALNDKSACVRATAIESTAQRCKKNPIYSPKIVEQSQI 131
Query: 200 NLCRNKDPPPS----MSTIIELLPALNILIHHHDTSVSIYLWLSIIEKNPQISKILVSKM 255
++I + +LI+ + N +
Sbjct: 132 TAFDKSTNVRRATAFAISVINDKATIPLLINLLKDPNGDVRNWAAFAININKYDNSDIRD 191
Query: 256 KILVDTVWALSYLTDGGNDQIQMVIDSGVVPSLIPLLSHKEVKVQTASLRAVGNI 310
+ + + D V+ L L V A G +
Sbjct: 192 CFVEMLQDKNEEVRIEAIIGLSYRKDKRVLSVLCDELKKNTVYDDII--EAAGEL 244
>d1te4a_ a.118.1.16 (A:) MTH187 {Archaeon Methanobacterium
thermoautotrophicum [TaxId: 145262]}
Length = 111
Score = 27.2 bits (59), Expect = 3.9
Identities = 7/55 (12%), Positives = 16/55 (29%), Gaps = 12/55 (21%)
Query: 99 RSDRPNLQFEAAWALTNIASGTSAQTQEVVAAGAVPLFLRLLMSPHSNVCEQAVW 153
+ ++ + + AL+ + A L L + + A W
Sbjct: 2 ADENKWVRRDVSTALSRMGDE------------AFEPLLESLSNEDWRIRGAAAW 44
Score = 26.4 bits (57), Expect = 6.4
Identities = 19/91 (20%), Positives = 29/91 (31%), Gaps = 19/91 (20%)
Query: 75 SDKNPPI-----EAL--IHSGILPVLVECLERSDRPNLQFEAAWALTNIASGTSAQTQEV 127
+D+N + AL + L+E L D ++ AAW
Sbjct: 2 ADENKWVRRDVSTALSRMGDEAFEPLLESLSNED-WRIRGAAAW-----------IIGNF 49
Query: 128 VAAGAVPLFLRLLMSPHSNVCEQAVWALGNI 158
AV ++LL V A +L I
Sbjct: 50 QDERAVEPLIKLLEDDSGFVRSGAARSLEQI 80
Score = 26.0 bits (56), Expect = 8.1
Identities = 7/51 (13%), Positives = 15/51 (29%), Gaps = 12/51 (23%)
Query: 386 PNLQFEAAWALTNIASGTSAQTQEVVAAGAVPLFLRLLMSPHSNVCEQAVW 436
++ + + AL+ + A L L + + A W
Sbjct: 6 KWVRRDVSTALSRMGDE------------AFEPLLESLSNEDWRIRGAAAW 44
>d1dbia_ c.41.1.1 (A:) Thermostable serine protease {Bacillus sp.,
AK.1 [TaxId: 1409]}
Length = 280
Score = 28.4 bits (62), Expect = 4.1
Identities = 15/77 (19%), Positives = 25/77 (32%), Gaps = 18/77 (23%)
Query: 256 KILVDTVWALSYLTDGGNDQIQMVIDSGVVPSLIPLLSHKEVKVQTASLRAVGNIVTGTD 315
D W ++ G + Q VID+GV +H ++ G ++ G D
Sbjct: 17 NTYTDYAWDVTK---GSSGQEIAVIDTGVDY------THPDLD---------GKVIKGYD 58
Query: 316 EQTQVILNCDALSHFPA 332
D +H
Sbjct: 59 FVDNDYDPMDLNNHGTH 75
>d3lkfa_ f.6.1.1 (A:) Leukocidin F (HlgB) {Staphylococcus aureus
[TaxId: 1280]}
Length = 299
Score = 27.2 bits (60), Expect = 7.9
Identities = 7/36 (19%), Positives = 15/36 (41%), Gaps = 2/36 (5%)
Query: 260 DTVWALSYLTDGGNDQIQMVIDSGVVPSLIPLLSHK 295
+ +A Q+ ++ S P + +LSH+
Sbjct: 199 SSAYAGQNFIA--QHQMPLLSRSNFNPEFLSVLSHR 232
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.320 0.135 0.398
Gapped
Lambda K H
0.267 0.0608 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 3,093,448
Number of extensions: 145212
Number of successful extensions: 487
Number of sequences better than 10.0: 1
Number of HSP's gapped: 396
Number of HSP's successfully gapped: 54
Length of query: 845
Length of database: 2,407,596
Length adjustment: 93
Effective length of query: 752
Effective length of database: 1,130,706
Effective search space: 850290912
Effective search space used: 850290912
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 57 (26.0 bits)