BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy12609
(93 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q25531|VA0D_MANSE V-type proton ATPase subunit d OS=Manduca sexta PE=2 SV=1
Length = 348
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 74/79 (93%), Positives = 76/79 (96%)
Query: 15 EYSALFEGAGNDPGDKTLEDKFFEHEVRLNVYAFLQQFHFGVFYSYLKLKEQECRNIVWI 74
EYSALFEGAGN+ GDKTLEDKFFEHEV LNV+AFLQQFHFGVFYSYLKLKEQECRNIVWI
Sbjct: 270 EYSALFEGAGNNVGDKTLEDKFFEHEVNLNVHAFLQQFHFGVFYSYLKLKEQECRNIVWI 329
Query: 75 SECVAQKHRTKIDNYIPIF 93
SECVAQKHR KIDNYIPIF
Sbjct: 330 SECVAQKHRAKIDNYIPIF 348
>sp|Q9W4P5|VA0D1_DROME V-type proton ATPase subunit d 1 OS=Drosophila melanogaster
GN=VhaAC39-1 PE=2 SV=1
Length = 350
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 70/79 (88%), Positives = 78/79 (98%)
Query: 15 EYSALFEGAGNDPGDKTLEDKFFEHEVRLNVYAFLQQFHFGVFYSYLKLKEQECRNIVWI 74
EY+ALF+G+GN+PGDKTLEDKFFEHEV+L+VYAFLQQFHFGVFY+YLKLKEQECRNIVWI
Sbjct: 272 EYAALFDGSGNNPGDKTLEDKFFEHEVKLDVYAFLQQFHFGVFYAYLKLKEQECRNIVWI 331
Query: 75 SECVAQKHRTKIDNYIPIF 93
+ECVAQKHR KIDNYIPIF
Sbjct: 332 AECVAQKHRAKIDNYIPIF 350
>sp|P51863|VA0D1_MOUSE V-type proton ATPase subunit d 1 OS=Mus musculus GN=Atp6v0d1 PE=1
SV=2
Length = 351
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 63/79 (79%), Positives = 73/79 (92%)
Query: 15 EYSALFEGAGNDPGDKTLEDKFFEHEVRLNVYAFLQQFHFGVFYSYLKLKEQECRNIVWI 74
EY LFEGAG++PGDKTLED+FFEHEV+LN AFL QFHFGVFY+++KLKEQECRNIVWI
Sbjct: 273 EYKLLFEGAGSNPGDKTLEDRFFEHEVKLNKLAFLNQFHFGVFYAFVKLKEQECRNIVWI 332
Query: 75 SECVAQKHRTKIDNYIPIF 93
+EC+AQ+HR KIDNYIPIF
Sbjct: 333 AECIAQRHRAKIDNYIPIF 351
>sp|Q5R6I1|VA0D1_PONAB V-type proton ATPase subunit d 1 OS=Pongo abelii GN=ATP6V0D1 PE=2
SV=1
Length = 351
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 63/79 (79%), Positives = 73/79 (92%)
Query: 15 EYSALFEGAGNDPGDKTLEDKFFEHEVRLNVYAFLQQFHFGVFYSYLKLKEQECRNIVWI 74
EY LFEGAG++PGDKTLED+FFEHEV+LN AFL QFHFGVFY+++KLKEQECRNIVWI
Sbjct: 273 EYKLLFEGAGSNPGDKTLEDRFFEHEVKLNKLAFLNQFHFGVFYAFVKLKEQECRNIVWI 332
Query: 75 SECVAQKHRTKIDNYIPIF 93
+EC+AQ+HR KIDNYIPIF
Sbjct: 333 AECIAQRHRAKIDNYIPIF 351
>sp|P61421|VA0D1_HUMAN V-type proton ATPase subunit d 1 OS=Homo sapiens GN=ATP6V0D1 PE=1
SV=1
Length = 351
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 63/79 (79%), Positives = 73/79 (92%)
Query: 15 EYSALFEGAGNDPGDKTLEDKFFEHEVRLNVYAFLQQFHFGVFYSYLKLKEQECRNIVWI 74
EY LFEGAG++PGDKTLED+FFEHEV+LN AFL QFHFGVFY+++KLKEQECRNIVWI
Sbjct: 273 EYKLLFEGAGSNPGDKTLEDRFFEHEVKLNKLAFLNQFHFGVFYAFVKLKEQECRNIVWI 332
Query: 75 SECVAQKHRTKIDNYIPIF 93
+EC+AQ+HR KIDNYIPIF
Sbjct: 333 AECIAQRHRAKIDNYIPIF 351
>sp|P61420|VA0D1_BOVIN V-type proton ATPase subunit d 1 OS=Bos taurus GN=ATP6V0D1 PE=1
SV=1
Length = 351
Score = 144 bits (363), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 63/79 (79%), Positives = 73/79 (92%)
Query: 15 EYSALFEGAGNDPGDKTLEDKFFEHEVRLNVYAFLQQFHFGVFYSYLKLKEQECRNIVWI 74
EY LFEGAG++PGDKTLED+FFEHEV+LN AFL QFHFGVFY+++KLKEQECRNIVWI
Sbjct: 273 EYKLLFEGAGSNPGDKTLEDRFFEHEVKLNKLAFLNQFHFGVFYAFVKLKEQECRNIVWI 332
Query: 75 SECVAQKHRTKIDNYIPIF 93
+EC+AQ+HR KIDNYIPIF
Sbjct: 333 AECIAQRHRAKIDNYIPIF 351
>sp|Q5ZHL0|VA0D2_CHICK V-type proton ATPase subunit d 2 OS=Gallus gallus GN=ATP6V0D2 PE=2
SV=1
Length = 351
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 61/79 (77%), Positives = 72/79 (91%)
Query: 15 EYSALFEGAGNDPGDKTLEDKFFEHEVRLNVYAFLQQFHFGVFYSYLKLKEQECRNIVWI 74
EY A+FEG GND G+KTLED FFEHE++LNV AF QFHFGVFY+Y+KLKEQECRNIVWI
Sbjct: 273 EYKAVFEGVGNDSGEKTLEDAFFEHEIKLNVLAFNNQFHFGVFYAYIKLKEQECRNIVWI 332
Query: 75 SECVAQKHRTKIDNYIPIF 93
+EC++Q+HRTKI+NYIPIF
Sbjct: 333 AECISQRHRTKINNYIPIF 351
>sp|Q6P335|VA0D2_XENTR V-type proton ATPase subunit d 2 OS=Xenopus tropicalis GN=atp6v0d2
PE=2 SV=1
Length = 350
Score = 135 bits (340), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 60/79 (75%), Positives = 70/79 (88%)
Query: 15 EYSALFEGAGNDPGDKTLEDKFFEHEVRLNVYAFLQQFHFGVFYSYLKLKEQECRNIVWI 74
EY ALFEG G G+KTLEDKFFEHEV++NV AF QFHFGVFY+Y+KLKEQECRNIVWI
Sbjct: 272 EYKALFEGVGIGTGEKTLEDKFFEHEVKMNVLAFNNQFHFGVFYAYVKLKEQECRNIVWI 331
Query: 75 SECVAQKHRTKIDNYIPIF 93
+EC++Q+HRTKI+NYIPI
Sbjct: 332 AECISQRHRTKINNYIPIL 350
>sp|Q8N8Y2|VA0D2_HUMAN V-type proton ATPase subunit d 2 OS=Homo sapiens GN=ATP6V0D2 PE=2
SV=1
Length = 350
Score = 112 bits (279), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 51/78 (65%), Positives = 64/78 (82%), Gaps = 1/78 (1%)
Query: 16 YSALFEGAGNDPGDKTLEDKFFEHEVRLNVYAFLQQFHFGVFYSYLKLKEQECRNIVWIS 75
Y LFE G G KTLED F+E EV++NV AF +QFH+GVFY+Y+KLKEQE RNIVWI+
Sbjct: 274 YKPLFEAVGGS-GGKTLEDVFYEREVQMNVLAFNRQFHYGVFYAYVKLKEQEIRNIVWIA 332
Query: 76 ECVAQKHRTKIDNYIPIF 93
EC++Q+HRTKI++YIPI
Sbjct: 333 ECISQRHRTKINSYIPIL 350
>sp|Q2KJB6|VA0D2_BOVIN V-type proton ATPase subunit d 2 OS=Bos taurus GN=ATP6V0D2 PE=2
SV=1
Length = 351
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 49/78 (62%), Positives = 62/78 (79%)
Query: 16 YSALFEGAGNDPGDKTLEDKFFEHEVRLNVYAFLQQFHFGVFYSYLKLKEQECRNIVWIS 75
Y LFE + G KTLED F+E EV++NV AF +QFH+GVFY+Y KLKEQE RNIVWI+
Sbjct: 274 YKPLFEAVSDSSGGKTLEDVFYEREVQMNVLAFNRQFHYGVFYAYTKLKEQEMRNIVWIA 333
Query: 76 ECVAQKHRTKIDNYIPIF 93
EC++Q+ RTKI++YIPI
Sbjct: 334 ECISQRQRTKINSYIPIL 351
>sp|Q80SY3|VA0D2_MOUSE V-type proton ATPase subunit d 2 OS=Mus musculus GN=Atp6v0d2 PE=2
SV=2
Length = 350
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 50/78 (64%), Positives = 64/78 (82%), Gaps = 1/78 (1%)
Query: 16 YSALFEGAGNDPGDKTLEDKFFEHEVRLNVYAFLQQFHFGVFYSYLKLKEQECRNIVWIS 75
Y LF+ G G KTLED F+E EV++NV AF +QFH+GVFY+Y+KLKEQE RNIVWI+
Sbjct: 274 YKPLFDAVGGS-GGKTLEDVFYEREVQMNVLAFNRQFHYGVFYAYVKLKEQEMRNIVWIA 332
Query: 76 ECVAQKHRTKIDNYIPIF 93
EC++Q+HRTKI++YIPI
Sbjct: 333 ECISQRHRTKINSYIPIL 350
>sp|Q5FVL0|VA0D2_RAT V-type proton ATPase subunit d 2 OS=Rattus norvegicus GN=Atp6v0d2
PE=2 SV=1
Length = 350
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 50/78 (64%), Positives = 64/78 (82%), Gaps = 1/78 (1%)
Query: 16 YSALFEGAGNDPGDKTLEDKFFEHEVRLNVYAFLQQFHFGVFYSYLKLKEQECRNIVWIS 75
Y LF+ G G KTLED F+E EV++NV AF +QFH+GVFY+Y+KLKEQE RNIVWI+
Sbjct: 274 YKPLFDAVGGS-GGKTLEDVFYEREVQMNVLAFNRQFHYGVFYAYVKLKEQEMRNIVWIA 332
Query: 76 ECVAQKHRTKIDNYIPIF 93
EC++Q+HRTKI++YIPI
Sbjct: 333 ECISQRHRTKINSYIPIL 350
>sp|Q5R7B7|VA0D2_PONAB V-type proton ATPase subunit d 2 OS=Pongo abelii GN=ATP6V0D2 PE=2
SV=2
Length = 350
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 50/78 (64%), Positives = 63/78 (80%), Gaps = 1/78 (1%)
Query: 16 YSALFEGAGNDPGDKTLEDKFFEHEVRLNVYAFLQQFHFGVFYSYLKLKEQECRNIVWIS 75
Y LFE G G KTLED F+E EV++NV AF +QFH+GVFY+Y+KLKEQE RNI WI+
Sbjct: 274 YKPLFEAVGGS-GGKTLEDVFYEREVQMNVLAFNRQFHYGVFYAYVKLKEQEIRNIAWIA 332
Query: 76 ECVAQKHRTKIDNYIPIF 93
EC++Q+HRTKI++YIPI
Sbjct: 333 ECISQRHRTKINSYIPIL 350
>sp|P54641|VA0D_DICDI V-type proton ATPase subunit d OS=Dictyostelium discoideum
GN=vatD-1 PE=1 SV=2
Length = 356
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 40/65 (61%), Positives = 53/65 (81%)
Query: 29 DKTLEDKFFEHEVRLNVYAFLQQFHFGVFYSYLKLKEQECRNIVWISECVAQKHRTKIDN 88
+K+LED FFEHEV LN AF Q+ +GVFY+Y+KL+EQE RNIVWI+EC++Q + K++
Sbjct: 292 EKSLEDSFFEHEVHLNRMAFEDQYGYGVFYAYIKLREQEIRNIVWIAECISQNMKQKMNQ 351
Query: 89 YIPIF 93
YIPIF
Sbjct: 352 YIPIF 356
>sp|Q9VCQ3|VA0D2_DROME Probable V-type proton ATPase subunit d 2 OS=Drosophila
melanogaster GN=VhaAC39-2 PE=2 SV=1
Length = 350
Score = 90.1 bits (222), Expect = 3e-18, Method: Composition-based stats.
Identities = 43/84 (51%), Positives = 58/84 (69%), Gaps = 2/84 (2%)
Query: 10 NIFPQEYSALFEGAGNDP-GDKTLEDKFFEHEVRLNVYAFLQQFHFGVFYSYLKLKEQEC 68
N+F Y +F+ D G TLED+F E + NV FLQQ+HFG+FYS++KLK+ E
Sbjct: 265 NVF-DGYGKMFDNLERDSDGMITLEDRFLMMEAKKNVQTFLQQYHFGIFYSFIKLKQLEV 323
Query: 69 RNIVWISECVAQKHRTKIDNYIPI 92
RNIVWISEC+AQ+ +I+ +IPI
Sbjct: 324 RNIVWISECIAQRQTDRINAFIPI 347
>sp|O13753|VA0D_SCHPO V-type proton ATPase subunit d OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=vma6 PE=3 SV=1
Length = 343
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 39/80 (48%), Positives = 54/80 (67%), Gaps = 4/80 (5%)
Query: 14 QEYSALFEGAGNDPGDKTLEDKFFEHEVRLNVYAFLQQFHFGVFYSYLKLKEQECRNIVW 73
+EYS F+ K+L+D F E EV LN AFLQQFH+G+ Y++LKL+EQE RN+ W
Sbjct: 268 KEYSDFFD----QNSQKSLDDHFNEKEVELNKLAFLQQFHYGIVYAFLKLREQEIRNLTW 323
Query: 74 ISECVAQKHRTKIDNYIPIF 93
I+EC++Q R + N +PI
Sbjct: 324 IAECISQNQRDRALNIVPIL 343
>sp|P53659|VA0D_NEUCR V-type proton ATPase subunit d OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=vma-6 PE=3 SV=1
Length = 364
Score = 77.8 bits (190), Expect = 2e-14, Method: Composition-based stats.
Identities = 30/64 (46%), Positives = 49/64 (76%)
Query: 30 KTLEDKFFEHEVRLNVYAFLQQFHFGVFYSYLKLKEQECRNIVWISECVAQKHRTKIDNY 89
K+LED F++ E+ ++ AF +QF + + Y+++KL+EQE RNI WI+EC+AQ + +I+NY
Sbjct: 301 KSLEDMFYQKEMEISKMAFTRQFTYAIVYAWVKLREQEIRNITWIAECIAQNQKERINNY 360
Query: 90 IPIF 93
I +F
Sbjct: 361 ISVF 364
>sp|Q9LHA4|VA0D2_ARATH V-type proton ATPase subunit d2 OS=Arabidopsis thaliana GN=VHA-D2
PE=2 SV=1
Length = 351
Score = 73.9 bits (180), Expect = 3e-13, Method: Composition-based stats.
Identities = 35/76 (46%), Positives = 52/76 (68%), Gaps = 3/76 (3%)
Query: 16 YSALFEGAGNDPGDKTLEDK-FFEHEVRLNVYAFLQQFHFGVFYSYLKLKEQECRNIVWI 74
Y A+F G+ + DK F+E EVR AF QQFH+ VF++Y++L+EQE RN++WI
Sbjct: 274 YQAIFSKMSY--GESQMLDKAFYEEEVRRLCLAFEQQFHYAVFFAYMRLREQEIRNLMWI 331
Query: 75 SECVAQKHRTKIDNYI 90
SECVAQ +++I + +
Sbjct: 332 SECVAQNQKSRIHDSV 347
>sp|Q9LJI5|VA0D1_ARATH V-type proton ATPase subunit d1 OS=Arabidopsis thaliana GN=VHA-D1
PE=2 SV=1
Length = 351
Score = 73.9 bits (180), Expect = 3e-13, Method: Composition-based stats.
Identities = 35/76 (46%), Positives = 52/76 (68%), Gaps = 3/76 (3%)
Query: 16 YSALFEGAGNDPGDKTLEDK-FFEHEVRLNVYAFLQQFHFGVFYSYLKLKEQECRNIVWI 74
Y A+F G+ + DK F+E EVR AF QQFH+ VF++Y++L+EQE RN++WI
Sbjct: 274 YQAIFSKMSY--GESQMLDKAFYEEEVRRLCLAFEQQFHYAVFFAYMRLREQEIRNLMWI 331
Query: 75 SECVAQKHRTKIDNYI 90
SECVAQ +++I + +
Sbjct: 332 SECVAQNQKSRIHDSV 347
>sp|Q8RU33|VA0D_ORYSJ Probable V-type proton ATPase subunit d OS=Oryza sativa subsp.
japonica GN=Os01g0587000 PE=2 SV=1
Length = 351
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 55/80 (68%), Gaps = 4/80 (5%)
Query: 16 YSALFEGAGNDPGDKTLEDK-FFEHEVRLNVYAFLQQFHFGVFYSYLKLKEQECRNIVWI 74
Y A+F A G+ + DK F+E EVR +F QQFH+ VF++Y++L+EQE RN++WI
Sbjct: 274 YQAIF--AKISYGESQMLDKAFYEEEVRRLCLSFEQQFHYAVFFAYIRLREQEIRNLMWI 331
Query: 75 SECVAQKHRTKI-DNYIPIF 93
SECVAQ + ++ D+ + IF
Sbjct: 332 SECVAQNQKNRVHDSVVFIF 351
>sp|P32366|VA0D_YEAST V-type proton ATPase subunit d OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=VMA6 PE=1 SV=2
Length = 345
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 43/62 (69%)
Query: 32 LEDKFFEHEVRLNVYAFLQQFHFGVFYSYLKLKEQECRNIVWISECVAQKHRTKIDNYIP 91
LED F++ E+ L AF QQF ++++K KEQE RNI WI+EC+AQ R +I+NYI
Sbjct: 284 LEDHFYQLEMELCRDAFTQQFAISTVWAWMKSKEQEVRNITWIAECIAQNQRERINNYIS 343
Query: 92 IF 93
++
Sbjct: 344 VY 345
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.326 0.143 0.446
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 36,978,549
Number of Sequences: 539616
Number of extensions: 1348746
Number of successful extensions: 2890
Number of sequences better than 100.0: 21
Number of HSP's better than 100.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 2869
Number of HSP's gapped (non-prelim): 21
length of query: 93
length of database: 191,569,459
effective HSP length: 63
effective length of query: 30
effective length of database: 157,573,651
effective search space: 4727209530
effective search space used: 4727209530
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 55 (25.8 bits)